BAMF_3886 984aac7a5a87bc657e519aafbe0f75e3 212 Gene3D G3DSA:3.40.109.10 2 212 2.9E-63 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BAMF_3886 984aac7a5a87bc657e519aafbe0f75e3 212 Pfam PF00881 Nitroreductase family 14 192 4.8E-32 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BAMF_3886 984aac7a5a87bc657e519aafbe0f75e3 212 SUPERFAMILY SSF55469 9 210 6.81E-60 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BAMF_3510 7c8256a2278f9fd2700f198a97764953 229 Pfam PF00092 von Willebrand factor type A domain 35 217 1.3E-12 T 12-10-2018 IPR002035 von Willebrand factor, type A BAMF_3510 7c8256a2278f9fd2700f198a97764953 229 SUPERFAMILY SSF53300 22 222 8.11E-25 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BAMF_3510 7c8256a2278f9fd2700f198a97764953 229 Gene3D G3DSA:3.40.50.410 28 229 5.6E-30 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BAMF_3510 7c8256a2278f9fd2700f198a97764953 229 SMART SM00327 33 221 5.4E-15 T 12-10-2018 IPR002035 von Willebrand factor, type A BAMF_3776 a645b73aafc67a18578dad9c30a4f685 257 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3776 a645b73aafc67a18578dad9c30a4f685 257 Gene3D G3DSA:3.40.50.300 1 251 1.1E-66 T 12-10-2018 BAMF_3776 a645b73aafc67a18578dad9c30a4f685 257 Pfam PF00005 ABC transporter 23 171 1.0E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3776 a645b73aafc67a18578dad9c30a4f685 257 SUPERFAMILY SSF52540 4 224 1.73E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3776 a645b73aafc67a18578dad9c30a4f685 257 SMART SM00382 32 220 1.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1956 af85c25f215bb3a5aa3510c1df9b1695 238 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_1956 af85c25f215bb3a5aa3510c1df9b1695 238 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 0.0022 T 12-10-2018 BAMF_1956 af85c25f215bb3a5aa3510c1df9b1695 238 Gene3D G3DSA:3.40.50.720 1 235 1.0E-73 T 12-10-2018 BAMF_1956 af85c25f215bb3a5aa3510c1df9b1695 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1956 af85c25f215bb3a5aa3510c1df9b1695 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1956 af85c25f215bb3a5aa3510c1df9b1695 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1956 af85c25f215bb3a5aa3510c1df9b1695 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1956 af85c25f215bb3a5aa3510c1df9b1695 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1956 af85c25f215bb3a5aa3510c1df9b1695 238 Pfam PF00106 short chain dehydrogenase 7 197 2.6E-66 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1956 af85c25f215bb3a5aa3510c1df9b1695 238 SUPERFAMILY SSF51735 2 220 2.27E-71 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1956 af85c25f215bb3a5aa3510c1df9b1695 238 PIRSF PIRSF000126 1 237 8.1E-65 T 12-10-2018 BAMF_1956 af85c25f215bb3a5aa3510c1df9b1695 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.4E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1956 af85c25f215bb3a5aa3510c1df9b1695 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.4E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1956 af85c25f215bb3a5aa3510c1df9b1695 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.4E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3496 651bc854c159a5d12e378abed446f375 289 Pfam PF01551 Peptidase family M23 119 216 7.9E-25 T 12-10-2018 IPR016047 Peptidase M23 BAMF_3496 651bc854c159a5d12e378abed446f375 289 SUPERFAMILY SSF51261 112 220 1.94E-27 T 12-10-2018 IPR011055 Duplicated hybrid motif BAMF_3496 651bc854c159a5d12e378abed446f375 289 Gene3D G3DSA:2.70.70.10 75 232 4.1E-56 T 12-10-2018 IPR011055 Duplicated hybrid motif BAMF_2422 18c04be7c238de15e0f233811e3587ad 213 Gene3D G3DSA:1.10.10.10 2 64 3.5E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2422 18c04be7c238de15e0f233811e3587ad 213 SMART SM00116 154 205 0.28 T 12-10-2018 IPR000644 CBS domain BAMF_2422 18c04be7c238de15e0f233811e3587ad 213 SMART SM00116 87 135 0.0014 T 12-10-2018 IPR000644 CBS domain BAMF_2422 18c04be7c238de15e0f233811e3587ad 213 Gene3D G3DSA:3.10.580.10 65 213 3.2E-62 T 12-10-2018 BAMF_2422 18c04be7c238de15e0f233811e3587ad 213 SUPERFAMILY SSF54631 71 205 9.98E-22 T 12-10-2018 BAMF_2422 18c04be7c238de15e0f233811e3587ad 213 SUPERFAMILY SSF46785 6 82 1.16E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2422 18c04be7c238de15e0f233811e3587ad 213 Pfam PF00571 CBS domain 148 204 3.0E-5 T 12-10-2018 IPR000644 CBS domain BAMF_2422 18c04be7c238de15e0f233811e3587ad 213 Pfam PF00571 CBS domain 81 134 6.8E-7 T 12-10-2018 IPR000644 CBS domain BAMF_2422 18c04be7c238de15e0f233811e3587ad 213 Pfam PF08279 HTH domain 10 62 4.5E-13 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BAMF_2422 18c04be7c238de15e0f233811e3587ad 213 PIRSF PIRSF026546 5 211 1.2E-102 T 12-10-2018 IPR016842 Protein of unknown function UCP026546, HtH-CBS BAMF_2212 de590d648658e7b41c6647bb818892b1 391 Pfam PF01578 Cytochrome C assembly protein 84 388 1.5E-33 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BAMF_2212 de590d648658e7b41c6647bb818892b1 391 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 48 391 4.0E-74 T 12-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 Gene3D G3DSA:1.20.140.160 98 252 4.5E-44 T 12-10-2018 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 248 8.2E-31 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 27 249 2.3E-86 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 SUPERFAMILY SSF88946 6 99 3.14E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 54 67 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 SUPERFAMILY SSF88659 100 168 8.04E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 Pfam PF04545 Sigma-70, region 4 199 247 1.9E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 Pfam PF04542 Sigma-70 region 2 27 99 1.0E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 219 245 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 Pfam PF04539 Sigma-70 region 3 106 184 1.2E-10 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 SUPERFAMILY SSF88659 163 251 1.27E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 PRINTS PR00046 Major sigma-70 factor signature 219 234 7.8E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 PRINTS PR00046 Major sigma-70 factor signature 54 67 7.8E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 PRINTS PR00046 Major sigma-70 factor signature 234 245 7.8E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 PRINTS PR00046 Major sigma-70 factor signature 202 214 7.8E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 PRINTS PR00046 Major sigma-70 factor signature 78 86 7.8E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 PIRSF PIRSF000770 11 254 2.2E-40 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1719 47dfd4ba037e2c468591740f86acba8f 254 Gene3D G3DSA:1.10.1740.10 14 96 3.8E-27 T 12-10-2018 BAMF_0010 df7424bbd621ce53647fae1bb1fee6a9 443 SUPERFAMILY SSF56601 9 307 9.83E-75 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_0010 df7424bbd621ce53647fae1bb1fee6a9 443 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 310 413 9.4E-23 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_0010 df7424bbd621ce53647fae1bb1fee6a9 443 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 67 78 6.5E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BAMF_0010 df7424bbd621ce53647fae1bb1fee6a9 443 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 6.5E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BAMF_0010 df7424bbd621ce53647fae1bb1fee6a9 443 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 6.5E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BAMF_0010 df7424bbd621ce53647fae1bb1fee6a9 443 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 287 1.8E-84 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 BAMF_0010 df7424bbd621ce53647fae1bb1fee6a9 443 SMART SM00936 310 413 1.7E-25 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_0010 df7424bbd621ce53647fae1bb1fee6a9 443 Gene3D G3DSA:3.40.710.10 29 308 2.5E-89 T 12-10-2018 BAMF_0010 df7424bbd621ce53647fae1bb1fee6a9 443 Gene3D G3DSA:2.60.410.10 311 413 1.9E-22 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_0010 df7424bbd621ce53647fae1bb1fee6a9 443 SUPERFAMILY SSF69189 301 391 1.39E-19 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_2784 5dc05fcb4be0bfeab4fe8028ea336654 148 Pfam PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ 6 145 7.3E-64 T 12-10-2018 IPR019884 YtoQ family protein BAMF_2784 5dc05fcb4be0bfeab4fe8028ea336654 148 TIGRFAM TIGR03646 YtoQ_fam: YtoQ family protein 3 146 3.0E-69 T 12-10-2018 IPR019884 YtoQ family protein BAMF_2784 5dc05fcb4be0bfeab4fe8028ea336654 148 Gene3D G3DSA:3.40.50.450 2 148 3.6E-7 T 12-10-2018 BAMF_2784 5dc05fcb4be0bfeab4fe8028ea336654 148 SUPERFAMILY SSF52309 3 117 3.05E-5 T 12-10-2018 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SMART SM00823 Phosphopantetheine attachment site 2574 2646 1.9E-20 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SMART SM00823 Phosphopantetheine attachment site 3922 3993 2.8E-9 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SMART SM00823 Phosphopantetheine attachment site 2711 2783 2.4E-17 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SMART SM00823 Phosphopantetheine attachment site 1765 1835 1.2E-11 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SMART SM00823 Phosphopantetheine attachment site 312 383 2.2E-4 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:3.30.70.3050 3306 3403 4.2E-241 T 12-10-2018 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:3.40.47.10 1894 2500 3.6E-262 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:3.40.47.10 416 1010 4.0E-249 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:3.40.50.720 3425 3892 5.7E-116 T 12-10-2018 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 4267 4381 1.3E-32 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3091 3208 3.1E-41 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2155 2271 4.9E-44 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 675 792 1.1E-40 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SUPERFAMILY SSF53901 2837 3201 1.12E-89 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:3.10.129.110 1 273 8.4E-89 T 12-10-2018 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SUPERFAMILY SSF53901 410 782 2.16E-89 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SMART SM01294 2713 2779 4.8E-38 T 12-10-2018 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SMART SM01294 2576 2642 7.7E-43 T 12-10-2018 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SMART SM01294 3923 3989 1.0E-8 T 12-10-2018 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SUPERFAMILY SSF51735 1488 1715 7.3E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF14765 Polyketide synthase dehydratase 12 277 2.2E-20 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF14765 Polyketide synthase dehydratase 1029 1311 3.7E-55 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SUPERFAMILY SSF47336 1762 1837 1.31E-13 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SUPERFAMILY SSF53901 1890 2329 1.35E-93 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SMART SM00825 Beta-ketoacyl synthase 1895 2334 7.3E-210 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SMART SM00825 Beta-ketoacyl synthase 2840 3261 7.4E-190 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SMART SM00825 Beta-ketoacyl synthase 416 854 7.4E-201 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SMART SM00825 Beta-ketoacyl synthase 4029 4433 1.5E-102 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:3.30.70.3290 871 998 4.0E-249 T 12-10-2018 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF08659 KR domain 1491 1676 3.1E-52 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF08659 KR domain 3644 3835 1.6E-40 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:1.10.1200.10 1756 1834 4.9E-17 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:1.10.1200.10 3911 3992 4.1E-21 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:1.10.1200.10 302 384 5.4E-14 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SUPERFAMILY SSF47336 307 428 2.22E-13 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SMART SM00826 1029 1192 6.1E-17 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SUPERFAMILY SSF47336 3921 4041 2.09E-15 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:3.40.50.720 1316 1732 5.8E-140 T 12-10-2018 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:1.10.1200.10 2708 2796 1.1E-26 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:1.10.1200.10 2569 2660 1.8E-29 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:3.40.47.10 4022 4450 5.7E-133 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 4172 4188 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SUPERFAMILY SSF53901 4024 4376 5.14E-66 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2738 2753 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SUPERFAMILY SSF51735 3440 3623 5.91E-8 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:3.30.70.3050 2391 2489 3.6E-262 T 12-10-2018 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1491 1677 2.5E-42 T 12-10-2018 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3641 3836 6.2E-40 T 12-10-2018 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2601 2616 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1893 2147 3.9E-90 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4027 4259 8.4E-62 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2838 3083 9.1E-84 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 414 667 9.7E-89 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SUPERFAMILY SSF51735 1414 1473 6.69E-5 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3948 3963 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SUPERFAMILY SSF47336 2569 2650 9.81E-18 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:3.10.129.110 1035 1315 6.7E-81 T 12-10-2018 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF00550 Phosphopantetheine attachment site 1768 1830 1.3E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF00550 Phosphopantetheine attachment site 314 379 3.8E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF00550 Phosphopantetheine attachment site 3923 3989 1.1E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF00550 Phosphopantetheine attachment site 2715 2779 8.2E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF00550 Phosphopantetheine attachment site 2577 2642 4.1E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SUPERFAMILY SSF47336 2706 2784 9.29E-16 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 SUPERFAMILY SSF51735 3638 3879 5.9E-29 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 796 916 1.7E-8 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3211 3321 5.3E-15 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2276 2373 8.8E-11 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1791 1806 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1787 2a3054431f2e2bf0f10f50049d35ec0e 4476 Gene3D G3DSA:3.40.47.10 2840 3422 4.2E-241 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_3684 be3766a78309cf0bbef6eaa234d00bad 78 Gene3D G3DSA:1.10.1200.10 1 78 5.1E-28 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_3684 be3766a78309cf0bbef6eaa234d00bad 78 SUPERFAMILY SSF47336 2 76 9.68E-17 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_3684 be3766a78309cf0bbef6eaa234d00bad 78 Hamap MF_00565 D-alanyl carrier protein [dltC]. 1 78 51.15 T 12-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 BAMF_3684 be3766a78309cf0bbef6eaa234d00bad 78 Pfam PF00550 Phosphopantetheine attachment site 5 72 1.3E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_3684 be3766a78309cf0bbef6eaa234d00bad 78 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 4 76 7.4E-42 T 12-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 Gene3D G3DSA:3.50.50.60 152 273 7.9E-129 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 2.3E-43 T 12-10-2018 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.3E-43 T 12-10-2018 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 2.3E-43 T 12-10-2018 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 2.3E-43 T 12-10-2018 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 2.3E-43 T 12-10-2018 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 330 9.5E-75 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 PIRSF PIRSF000350 3 459 1.9E-99 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 SUPERFAMILY SSF55424 346 468 8.25E-41 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 SUPERFAMILY SSF51905 7 340 9.15E-69 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 Gene3D G3DSA:3.50.50.60 13 335 7.9E-129 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 468 1.2E-182 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.0E-75 T 12-10-2018 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 1.0E-75 T 12-10-2018 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 1.0E-75 T 12-10-2018 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 1.0E-75 T 12-10-2018 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 1.0E-75 T 12-10-2018 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 1.0E-75 T 12-10-2018 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 1.0E-75 T 12-10-2018 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 1.0E-75 T 12-10-2018 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.0E-75 T 12-10-2018 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 Gene3D G3DSA:3.30.390.30 348 468 8.7E-44 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BAMF_1536 1902b458759cd34a20d8b1a8556c3d3a 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 457 2.8E-37 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BAMF_3417 e8a9e2b7260e7006ccc820115280ff3c 316 Pfam PF01238 Phosphomannose isomerase type I 7 315 3.2E-65 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BAMF_3417 e8a9e2b7260e7006ccc820115280ff3c 316 PIRSF PIRSF036894 3 316 8.6E-126 T 12-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 BAMF_3417 e8a9e2b7260e7006ccc820115280ff3c 316 Gene3D G3DSA:2.60.120.10 228 316 1.1E-32 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_3417 e8a9e2b7260e7006ccc820115280ff3c 316 SUPERFAMILY SSF51182 3 315 4.36E-102 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BAMF_3417 e8a9e2b7260e7006ccc820115280ff3c 316 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 104 315 1.1E-60 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BAMF_3417 e8a9e2b7260e7006ccc820115280ff3c 316 Gene3D G3DSA:2.60.120.10 1 227 7.1E-91 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 Hamap MF_00020 Acetate kinase [ackA]. 1 395 198.88 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 Gene3D G3DSA:3.30.420.40 2 194 1.7E-77 T 12-10-2018 BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 TIGRFAM TIGR00016 ackA: acetate kinase 2 394 1.1E-184 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 PIRSF PIRSF000722 1 395 1.2E-155 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 SUPERFAMILY SSF53067 157 393 1.94E-95 T 12-10-2018 BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 Pfam PF00871 Acetokinase family 3 388 2.7E-179 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 SUPERFAMILY SSF53067 1 194 2.29E-73 T 12-10-2018 BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 Gene3D G3DSA:3.30.420.40 195 395 1.1E-81 T 12-10-2018 BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 PRINTS PR00471 Acetate kinase family signature 299 312 2.0E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 PRINTS PR00471 Acetate kinase family signature 202 223 2.0E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 PRINTS PR00471 Acetate kinase family signature 321 337 2.0E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 PRINTS PR00471 Acetate kinase family signature 375 387 2.0E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 PRINTS PR00471 Acetate kinase family signature 4 15 2.0E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2739 30c3da99fc8217fd636c1ab25a030b1c 395 PRINTS PR00471 Acetate kinase family signature 172 185 2.0E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_1029 9c100e1a49b1ee68d312f2d26f60c99c 214 SUPERFAMILY SSF46894 133 207 1.19E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_1029 9c100e1a49b1ee68d312f2d26f60c99c 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_1029 9c100e1a49b1ee68d312f2d26f60c99c 214 Pfam PF00072 Response regulator receiver domain 3 114 6.9E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_1029 9c100e1a49b1ee68d312f2d26f60c99c 214 SMART SM00448 1 114 5.1E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_1029 9c100e1a49b1ee68d312f2d26f60c99c 214 SUPERFAMILY SSF52172 1 132 3.84E-34 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_1029 9c100e1a49b1ee68d312f2d26f60c99c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.6E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_1029 9c100e1a49b1ee68d312f2d26f60c99c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.6E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_1029 9c100e1a49b1ee68d312f2d26f60c99c 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.6E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_1029 9c100e1a49b1ee68d312f2d26f60c99c 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 2.5E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_1029 9c100e1a49b1ee68d312f2d26f60c99c 214 SMART SM00421 146 203 2.0E-29 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_1029 9c100e1a49b1ee68d312f2d26f60c99c 214 Gene3D G3DSA:3.40.50.12740 1 208 1.0E-72 T 12-10-2018 BAMF_2789 d5479389e74f68f8a470fe5d51df9123 294 Pfam PF00753 Metallo-beta-lactamase superfamily 67 270 1.2E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_2789 d5479389e74f68f8a470fe5d51df9123 294 SUPERFAMILY SSF56281 15 275 2.29E-42 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_2789 d5479389e74f68f8a470fe5d51df9123 294 Gene3D G3DSA:3.60.15.10 17 282 9.5E-84 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_2789 d5479389e74f68f8a470fe5d51df9123 294 SMART SM00849 63 270 1.4E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_3530 27cc748072935ca27f3e6a67b860ef9b 151 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 139 2.4E-37 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BAMF_3530 27cc748072935ca27f3e6a67b860ef9b 151 Gene3D G3DSA:3.40.50.2300 1 149 7.5E-56 T 12-10-2018 BAMF_3530 27cc748072935ca27f3e6a67b860ef9b 151 SMART SM00226 1 144 1.3E-42 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BAMF_3530 27cc748072935ca27f3e6a67b860ef9b 151 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 8.0E-10 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BAMF_3530 27cc748072935ca27f3e6a67b860ef9b 151 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 76 91 8.0E-10 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BAMF_3530 27cc748072935ca27f3e6a67b860ef9b 151 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 116 131 8.0E-10 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BAMF_3530 27cc748072935ca27f3e6a67b860ef9b 151 SUPERFAMILY SSF52788 1 145 3.4E-37 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily BAMF_1267 a7396fd162d234197898ba73d06796fa 391 Gene3D G3DSA:3.90.1150.10 251 388 4.1E-46 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1267 a7396fd162d234197898ba73d06796fa 391 SUPERFAMILY SSF53383 23 384 2.89E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_1267 a7396fd162d234197898ba73d06796fa 391 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 382 5.6E-148 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BAMF_1267 a7396fd162d234197898ba73d06796fa 391 PIRSF PIRSF001434 1 385 2.0E-143 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BAMF_1267 a7396fd162d234197898ba73d06796fa 391 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 192 206 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BAMF_1267 a7396fd162d234197898ba73d06796fa 391 Gene3D G3DSA:3.40.640.10 7 250 1.2E-88 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_1669 ee0b454532b636469f2b74b04a7defbd 446 Gene3D G3DSA:3.40.50.300 91 286 3.2E-129 T 12-10-2018 BAMF_1669 ee0b454532b636469f2b74b04a7defbd 446 Pfam PF02978 Signal peptide binding domain 329 427 1.7E-34 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BAMF_1669 ee0b454532b636469f2b74b04a7defbd 446 SMART SM00382 100 275 7.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1669 ee0b454532b636469f2b74b04a7defbd 446 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BAMF_1669 ee0b454532b636469f2b74b04a7defbd 446 SUPERFAMILY SSF52540 43 355 1.81E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1669 ee0b454532b636469f2b74b04a7defbd 446 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 429 3.0E-191 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 BAMF_1669 ee0b454532b636469f2b74b04a7defbd 446 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 1.7E-22 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BAMF_1669 ee0b454532b636469f2b74b04a7defbd 446 Gene3D G3DSA:1.10.260.30 328 444 7.5E-45 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BAMF_1669 ee0b454532b636469f2b74b04a7defbd 446 SMART SM00963 2 87 2.5E-34 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BAMF_1669 ee0b454532b636469f2b74b04a7defbd 446 SMART SM00962 101 297 3.1E-119 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BAMF_1669 ee0b454532b636469f2b74b04a7defbd 446 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 434 35.852 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 BAMF_1669 ee0b454532b636469f2b74b04a7defbd 446 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 1.8E-78 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BAMF_1669 ee0b454532b636469f2b74b04a7defbd 446 Gene3D G3DSA:1.20.120.140 6 307 3.2E-129 T 12-10-2018 BAMF_1669 ee0b454532b636469f2b74b04a7defbd 446 SUPERFAMILY SSF47446 329 430 3.76E-39 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BAMF_1509 72b411ccdf2265a7e996b4edf301d0eb 378 Gene3D G3DSA:2.40.420.20 293 378 1.8E-16 T 12-10-2018 BAMF_1509 72b411ccdf2265a7e996b4edf301d0eb 378 Gene3D G3DSA:2.40.50.100 72 215 3.0E-22 T 12-10-2018 BAMF_1509 72b411ccdf2265a7e996b4edf301d0eb 378 Gene3D G3DSA:2.40.30.170 216 267 3.0E-22 T 12-10-2018 BAMF_1509 72b411ccdf2265a7e996b4edf301d0eb 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 259 1.1E-13 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BAMF_1509 72b411ccdf2265a7e996b4edf301d0eb 378 Gene3D G3DSA:1.10.287.470 97 170 3.0E-22 T 12-10-2018 BAMF_1231 788a16311c45e7cdc9a1cf9316b495d9 228 Gene3D G3DSA:1.10.530.10 64 228 1.0E-52 T 12-10-2018 BAMF_1231 788a16311c45e7cdc9a1cf9316b495d9 228 Pfam PF01464 Transglycosylase SLT domain 110 217 5.1E-35 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 BAMF_1231 788a16311c45e7cdc9a1cf9316b495d9 228 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 128 156 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 BAMF_1231 788a16311c45e7cdc9a1cf9316b495d9 228 SUPERFAMILY SSF53955 107 226 6.19E-49 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BAMF_1008 5c212ef659b05f410c1ce9920ccc6080 360 Pfam PF00990 Diguanylate cyclase, GGDEF domain 193 352 6.9E-42 T 12-10-2018 IPR000160 GGDEF domain BAMF_1008 5c212ef659b05f410c1ce9920ccc6080 360 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 190 354 1.4E-44 T 12-10-2018 IPR000160 GGDEF domain BAMF_1008 5c212ef659b05f410c1ce9920ccc6080 360 SMART SM00267 182 356 2.3E-55 T 12-10-2018 IPR000160 GGDEF domain BAMF_1008 5c212ef659b05f410c1ce9920ccc6080 360 SUPERFAMILY SSF55073 198 356 1.1E-43 T 12-10-2018 IPR029787 Nucleotide cyclase BAMF_1008 5c212ef659b05f410c1ce9920ccc6080 360 Gene3D G3DSA:3.30.70.270 187 359 7.1E-49 T 12-10-2018 BAMF_1008 5c212ef659b05f410c1ce9920ccc6080 360 Pfam PF07694 5TMR of 5TMR-LYT 22 177 2.2E-16 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 BAMF_2542 878f8786a7fa27f8ef0e19ee9b316e2e 422 Gene3D G3DSA:2.40.30.10 334 421 2.4E-36 T 12-10-2018 BAMF_2542 878f8786a7fa27f8ef0e19ee9b316e2e 422 Pfam PF01136 Peptidase family U32 93 323 1.3E-86 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BAMF_2542 878f8786a7fa27f8ef0e19ee9b316e2e 422 ProSitePatterns PS01276 Peptidase family U32 signature. 179 197 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BAMF_2542 878f8786a7fa27f8ef0e19ee9b316e2e 422 Pfam PF16325 Peptidase family U32 C-terminal domain 339 419 2.5E-24 T 12-10-2018 IPR032525 Peptidase family U32, C-terminal BAMF_0468 6b16ab4a92782d69eed6b3657e861b12 448 Gene3D G3DSA:3.30.43.10 8 87 1.7E-21 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 BAMF_0468 6b16ab4a92782d69eed6b3657e861b12 448 Gene3D G3DSA:3.30.465.50 92 444 1.8E-92 T 12-10-2018 BAMF_0468 6b16ab4a92782d69eed6b3657e861b12 448 Pfam PF01565 FAD binding domain 33 168 6.7E-30 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BAMF_0468 6b16ab4a92782d69eed6b3657e861b12 448 SUPERFAMILY SSF56176 6 202 4.49E-47 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BAMF_0468 6b16ab4a92782d69eed6b3657e861b12 448 Gene3D G3DSA:3.40.462.20 204 398 1.8E-92 T 12-10-2018 BAMF_0468 6b16ab4a92782d69eed6b3657e861b12 448 Pfam PF08031 Berberine and berberine like 400 444 8.9E-20 T 12-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 BAMF_3464 285de44bcb844de80ad07c65df923f33 85 Pfam PF17279 Family of unknown function (DUF5344) 2 83 1.3E-21 T 12-10-2018 BAMF_3464 285de44bcb844de80ad07c65df923f33 85 ProDom PD061728 YWQI YWQIA COIL COILED 2 85 1.0E-25 T 12-10-2018 IPR020299 Uncharacterised protein family YwqI BAMF_3370 0c036374a1454d8f149d9c536cb875ce 327 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 325 9.0E-174 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 BAMF_3370 0c036374a1454d8f149d9c536cb875ce 327 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 326 37.745 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 BAMF_3370 0c036374a1454d8f149d9c536cb875ce 327 Gene3D G3DSA:3.30.70.1660 90 318 5.8E-99 T 12-10-2018 BAMF_3370 0c036374a1454d8f149d9c536cb875ce 327 SUPERFAMILY SSF75620 1 324 1.83E-137 T 12-10-2018 BAMF_3370 0c036374a1454d8f149d9c536cb875ce 327 SMART SM00937 45 155 3.0E-61 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 BAMF_3370 0c036374a1454d8f149d9c536cb875ce 327 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 205 221 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BAMF_3370 0c036374a1454d8f149d9c536cb875ce 327 Pfam PF03462 PCRF domain 1 179 9.9E-62 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 BAMF_3370 0c036374a1454d8f149d9c536cb875ce 327 Pfam PF00472 RF-1 domain 189 298 2.1E-43 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BAMF_3370 0c036374a1454d8f149d9c536cb875ce 327 Gene3D G3DSA:1.20.58.410 1 83 8.4E-19 T 12-10-2018 BAMF_3370 0c036374a1454d8f149d9c536cb875ce 327 Gene3D G3DSA:3.30.160.20 186 281 5.8E-99 T 12-10-2018 BAMF_0162 a0bf95a2e2561db1a7be88944ce789a8 477 Gene3D G3DSA:3.30.750.24 386 477 1.1E-26 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_0162 a0bf95a2e2561db1a7be88944ce789a8 477 SUPERFAMILY SSF52091 391 475 9.42E-15 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_0162 a0bf95a2e2561db1a7be88944ce789a8 477 ProSitePatterns PS01130 SLC26A transporters signature. 43 64 - T 12-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 BAMF_0162 a0bf95a2e2561db1a7be88944ce789a8 477 Pfam PF00916 Sulfate permease family 163 355 1.1E-31 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BAMF_0162 a0bf95a2e2561db1a7be88944ce789a8 477 Pfam PF00916 Sulfate permease family 15 143 3.0E-26 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BAMF_0162 a0bf95a2e2561db1a7be88944ce789a8 477 Pfam PF01740 STAS domain 394 475 9.1E-9 T 12-10-2018 IPR002645 STAS domain BAMF_2584 411777a4b4dffd8e1c1f423262e93b48 334 Gene3D G3DSA:3.40.50.300 19 182 1.7E-40 T 12-10-2018 BAMF_2584 411777a4b4dffd8e1c1f423262e93b48 334 SMART SM00382 52 183 4.9E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2584 411777a4b4dffd8e1c1f423262e93b48 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 325 4.0E-34 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 BAMF_2584 411777a4b4dffd8e1c1f423262e93b48 334 Gene3D G3DSA:1.10.10.10 258 334 6.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2584 411777a4b4dffd8e1c1f423262e93b48 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 5 235 3.4E-119 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 BAMF_2584 411777a4b4dffd8e1c1f423262e93b48 334 SUPERFAMILY SSF52540 21 253 1.65E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2584 411777a4b4dffd8e1c1f423262e93b48 334 Gene3D G3DSA:1.10.8.60 183 257 2.3E-31 T 12-10-2018 BAMF_2584 411777a4b4dffd8e1c1f423262e93b48 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 175.088 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 BAMF_2584 411777a4b4dffd8e1c1f423262e93b48 334 SUPERFAMILY SSF46785 257 331 3.81E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2584 411777a4b4dffd8e1c1f423262e93b48 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 2.3E-33 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 BAMF_2584 411777a4b4dffd8e1c1f423262e93b48 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 327 2.5E-152 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 BAMF_1825 d97e199d6b189e6e4a3b950306e2ac49 416 Pfam PF11799 impB/mucB/samB family C-terminal domain 255 362 3.5E-17 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BAMF_1825 d97e199d6b189e6e4a3b950306e2ac49 416 Gene3D G3DSA:2.30.40.20 29 83 1.8E-25 T 12-10-2018 BAMF_1825 d97e199d6b189e6e4a3b950306e2ac49 416 Gene3D G3DSA:3.30.70.270 12 164 1.8E-25 T 12-10-2018 BAMF_1825 d97e199d6b189e6e4a3b950306e2ac49 416 Pfam PF00817 impB/mucB/samB family 15 160 3.3E-24 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BAMF_1825 d97e199d6b189e6e4a3b950306e2ac49 416 Gene3D G3DSA:3.30.1490.100 255 363 1.8E-14 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BAMF_1825 d97e199d6b189e6e4a3b950306e2ac49 416 Gene3D G3DSA:1.10.150.20 188 240 4.5E-16 T 12-10-2018 BAMF_1825 d97e199d6b189e6e4a3b950306e2ac49 416 SUPERFAMILY SSF100879 255 354 4.12E-16 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BAMF_1825 d97e199d6b189e6e4a3b950306e2ac49 416 SUPERFAMILY SSF56672 11 245 2.85E-49 T 12-10-2018 BAMF_1825 d97e199d6b189e6e4a3b950306e2ac49 416 Pfam PF11798 IMS family HHH motif 176 208 3.5E-6 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BAMF_1830 f64904af19fddf78f8d50e5b8c103de4 248 ProSitePatterns PS00776 Glycosyl hydrolases family 11 (GH11) active site signature 1. 134 144 - T 12-10-2018 IPR018208 Glycoside hydrolase family 11, active site 1 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BAMF_1830 f64904af19fddf78f8d50e5b8c103de4 248 PRINTS PR00911 Glycosyl hydrolase family 11 signature 185 194 2.5E-17 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BAMF_1830 f64904af19fddf78f8d50e5b8c103de4 248 PRINTS PR00911 Glycosyl hydrolase family 11 signature 134 144 2.5E-17 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BAMF_1830 f64904af19fddf78f8d50e5b8c103de4 248 PRINTS PR00911 Glycosyl hydrolase family 11 signature 208 216 2.5E-17 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BAMF_1830 f64904af19fddf78f8d50e5b8c103de4 248 PRINTS PR00911 Glycosyl hydrolase family 11 signature 160 166 2.5E-17 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BAMF_1830 f64904af19fddf78f8d50e5b8c103de4 248 PRINTS PR00911 Glycosyl hydrolase family 11 signature 180 185 2.5E-17 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BAMF_1830 f64904af19fddf78f8d50e5b8c103de4 248 PRINTS PR00911 Glycosyl hydrolase family 11 signature 124 133 2.5E-17 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BAMF_1830 f64904af19fddf78f8d50e5b8c103de4 248 Pfam PF00457 Glycosyl hydrolases family 11 56 237 1.2E-68 T 12-10-2018 IPR033123 Glycosyl hydrolases family 11 (GH11) domain MetaCyc: PWY-6717|MetaCyc: PWY-6784 BAMF_1830 f64904af19fddf78f8d50e5b8c103de4 248 Gene3D G3DSA:2.60.120.180 44 248 1.8E-100 T 12-10-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BAMF_1830 f64904af19fddf78f8d50e5b8c103de4 248 ProSitePatterns PS00777 Glycosyl hydrolases family 11 (GH11) active site signature 2. 223 234 - T 12-10-2018 IPR033119 Glycoside hydrolase family 11, active site 2 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BAMF_1830 f64904af19fddf78f8d50e5b8c103de4 248 SUPERFAMILY SSF49899 45 246 1.5E-85 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BAMF_2562 3be9a68e62f1ec2ed8ef95af5167836b 138 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 124 5.2E-34 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type BAMF_2562 3be9a68e62f1ec2ed8ef95af5167836b 138 Pfam PF02082 Transcriptional regulator 1 82 4.0E-26 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type BAMF_2562 3be9a68e62f1ec2ed8ef95af5167836b 138 Gene3D G3DSA:1.10.10.10 1 138 4.0E-51 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2562 3be9a68e62f1ec2ed8ef95af5167836b 138 SUPERFAMILY SSF46785 2 125 3.04E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2562 3be9a68e62f1ec2ed8ef95af5167836b 138 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:3.30.70.3050 1148 1252 3.7E-224 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SUPERFAMILY SSF47336 578 682 6.67E-15 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SUPERFAMILY SSF53383 1514 1926 4.69E-88 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SUPERFAMILY SSF52777 3547 3709 1.22E-43 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:3.30.559.30 2136 2386 1.6E-85 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Pfam PF00202 Aminotransferase class-III 1537 1897 1.1E-55 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:3.30.559.30 2676 2921 1.2E-131 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:3.30.559.10 2508 2866 1.2E-131 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3096 3107 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:1.10.1200.10 1285 1393 1.2E-11 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:3.30.559.10 1953 2320 1.6E-85 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SUPERFAMILY SSF52777 3715 3959 6.45E-58 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Pfam PF00668 Condensation domain 1950 2389 9.5E-72 T 12-10-2018 IPR001242 Condensation domain BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Pfam PF00668 Condensation domain 3544 3965 3.8E-121 T 12-10-2018 IPR001242 Condensation domain BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Pfam PF00668 Condensation domain 2504 2937 1.2E-116 T 12-10-2018 IPR001242 Condensation domain BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:3.40.50.12780 1 447 9.1E-118 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 669 916 4.3E-69 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:1.10.1200.10 3448 3528 1.7E-23 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:1.10.1200.10 2410 2495 1.1E-22 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Pfam PF00550 Phosphopantetheine attachment site 585 648 6.5E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Pfam PF00550 Phosphopantetheine attachment site 1295 1360 5.5E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Pfam PF00550 Phosphopantetheine attachment site 2423 2487 6.8E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Pfam PF00550 Phosphopantetheine attachment site 3461 3522 1.7E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:3.40.640.10 1572 1839 2.3E-120 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Pfam PF00501 AMP-binding enzyme 31 452 2.4E-71 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Pfam PF00501 AMP-binding enzyme 2957 3351 3.2E-97 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SUPERFAMILY SSF52777 2137 2373 8.45E-35 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SUPERFAMILY SSF52777 2505 2691 1.61E-37 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SUPERFAMILY SSF47336 3451 3522 1.06E-17 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SUPERFAMILY SSF56801 5 554 1.57E-100 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:3.40.50.12780 2943 3345 1.0E-124 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3483 3498 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SUPERFAMILY SSF52777 2679 2943 1.89E-57 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:3.30.300.30 3346 3447 4.8E-34 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:3.30.559.30 3713 3958 1.7E-143 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2978 3375 3.2E-134 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:3.30.559.10 3545 3903 1.7E-143 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1044 1156 1.1E-18 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 924 1041 1.5E-41 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:3.30.300.30 448 552 4.6E-28 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SUPERFAMILY SSF53901 666 1037 4.36E-87 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2446 2461 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SMART SM00825 Beta-ketoacyl synthase 671 1094 5.1E-174 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SUPERFAMILY SSF47336 1287 1381 2.75E-14 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:3.40.47.10 670 1263 3.7E-224 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Pfam PF13193 AMP-binding enzyme C-terminal domain 3359 3432 6.1E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SUPERFAMILY SSF56801 2915 3472 9.03E-153 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SMART SM00823 Phosphopantetheine attachment site 584 652 5.0E-5 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SMART SM00823 Phosphopantetheine attachment site 2422 2491 0.088 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SMART SM00823 Phosphopantetheine attachment site 3459 3528 0.013 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SMART SM00823 Phosphopantetheine attachment site 1292 1364 0.0042 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:3.90.1150.10 1507 1920 2.3E-120 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SUPERFAMILY SSF52777 1953 2130 2.5E-38 T 12-10-2018 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 1737 1773 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 833 849 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 SUPERFAMILY SSF47336 2414 2520 4.19E-16 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 Gene3D G3DSA:1.10.1200.10 573 656 6.3E-17 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1913 0952bf19bb929a2751d3a4d98fe55b33 3982 ProSitePatterns PS00455 Putative AMP-binding domain signature. 169 180 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_2989 bca647a05feec305ad9b23190d427c5f 376 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 171 196 - T 12-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 BAMF_2989 bca647a05feec305ad9b23190d427c5f 376 Gene3D G3DSA:3.40.50.720 128 304 4.8E-140 T 12-10-2018 BAMF_2989 bca647a05feec305ad9b23190d427c5f 376 SUPERFAMILY SSF51735 135 302 5.18E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2989 bca647a05feec305ad9b23190d427c5f 376 SMART SM01003 4 135 1.0E-80 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BAMF_2989 bca647a05feec305ad9b23190d427c5f 376 SUPERFAMILY SSF52283 1 359 7.14E-68 T 12-10-2018 BAMF_2989 bca647a05feec305ad9b23190d427c5f 376 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 135 4.4E-48 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BAMF_2989 bca647a05feec305ad9b23190d427c5f 376 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 2.0E-198 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 BAMF_2989 bca647a05feec305ad9b23190d427c5f 376 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 139 351 7.6E-83 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BAMF_2989 bca647a05feec305ad9b23190d427c5f 376 SMART SM01002 147 296 9.9E-87 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BAMF_2989 bca647a05feec305ad9b23190d427c5f 376 Gene3D G3DSA:3.40.50.720 3 352 4.8E-140 T 12-10-2018 BAMF_2989 bca647a05feec305ad9b23190d427c5f 376 PIRSF PIRSF000183 1 370 1.3E-194 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 BAMF_3682 a0693dd6d2ea3716d27cc9ae7b8c84bd 503 Pfam PF00501 AMP-binding enzyme 11 403 3.5E-87 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_3682 a0693dd6d2ea3716d27cc9ae7b8c84bd 503 Gene3D G3DSA:3.40.50.12780 1 397 4.6E-136 T 12-10-2018 BAMF_3682 a0693dd6d2ea3716d27cc9ae7b8c84bd 503 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 2 501 2.8E-229 T 12-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 BAMF_3682 a0693dd6d2ea3716d27cc9ae7b8c84bd 503 Hamap MF_00593 D-alanine--D-alanyl carrier protein ligase [dltA]. 1 503 238.459 T 12-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 BAMF_3682 a0693dd6d2ea3716d27cc9ae7b8c84bd 503 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 28 428 5.6E-102 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_3682 a0693dd6d2ea3716d27cc9ae7b8c84bd 503 Gene3D G3DSA:3.30.300.30 398 502 1.5E-30 T 12-10-2018 BAMF_3682 a0693dd6d2ea3716d27cc9ae7b8c84bd 503 SUPERFAMILY SSF56801 3 500 2.09E-119 T 12-10-2018 BAMF_3682 a0693dd6d2ea3716d27cc9ae7b8c84bd 503 Pfam PF13193 AMP-binding enzyme C-terminal domain 412 491 3.6E-7 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_3682 a0693dd6d2ea3716d27cc9ae7b8c84bd 503 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_1125 46aaed05ec4147be1f5bd34ecb78d660 309 SUPERFAMILY SSF58104 15 308 3.66E-51 T 12-10-2018 BAMF_1125 46aaed05ec4147be1f5bd34ecb78d660 309 SMART SM00283 71 304 2.0E-24 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_1125 46aaed05ec4147be1f5bd34ecb78d660 309 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 123 298 6.4E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_1125 46aaed05ec4147be1f5bd34ecb78d660 309 Gene3D G3DSA:1.10.490.10 1 55 1.1E-10 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 BAMF_1125 46aaed05ec4147be1f5bd34ecb78d660 309 Pfam PF11563 Protoglobin 2 61 8.9E-11 T 12-10-2018 BAMF_1125 46aaed05ec4147be1f5bd34ecb78d660 309 Gene3D G3DSA:1.10.287.950 110 309 6.2E-42 T 12-10-2018 BAMF_2932 41709a084bbfb190088136809ae32ca0 328 Pfam PF02254 TrkA-N domain 117 237 2.0E-16 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BAMF_2932 41709a084bbfb190088136809ae32ca0 328 SUPERFAMILY SSF51735 115 250 4.13E-19 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2932 41709a084bbfb190088136809ae32ca0 328 PRINTS PR00169 Potassium channel signature 9 32 4.4E-7 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BAMF_2932 41709a084bbfb190088136809ae32ca0 328 PRINTS PR00169 Potassium channel signature 42 64 4.4E-7 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BAMF_2932 41709a084bbfb190088136809ae32ca0 328 PRINTS PR00169 Potassium channel signature 71 97 4.4E-7 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 BAMF_2932 41709a084bbfb190088136809ae32ca0 328 Gene3D G3DSA:3.40.50.720 110 251 9.1E-26 T 12-10-2018 BAMF_2932 41709a084bbfb190088136809ae32ca0 328 Pfam PF07885 Ion channel 22 97 3.4E-15 T 12-10-2018 IPR013099 Potassium channel domain BAMF_2932 41709a084bbfb190088136809ae32ca0 328 Gene3D G3DSA:1.10.287.70 6 100 4.3E-20 T 12-10-2018 BAMF_2932 41709a084bbfb190088136809ae32ca0 328 SUPERFAMILY SSF81324 9 135 6.02E-25 T 12-10-2018 BAMF_1502 56c4f6f5fc78464fe44095b564aaaf90 200 Gene3D G3DSA:3.90.550.10 6 200 1.9E-40 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_1502 56c4f6f5fc78464fe44095b564aaaf90 200 Pfam PF12804 MobA-like NTP transferase domain 6 149 1.0E-21 T 12-10-2018 IPR025877 MobA-like NTP transferase BAMF_1502 56c4f6f5fc78464fe44095b564aaaf90 200 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 190 21.26 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 BAMF_1502 56c4f6f5fc78464fe44095b564aaaf90 200 SUPERFAMILY SSF53448 6 187 6.57E-20 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3501 89f4f93ef2b33dfd87fe92f080fabd33 128 ProDom PD031895 YWNG MEMBRANE TRANSMEMBRANE YWNC 4 122 2.0E-35 T 12-10-2018 IPR035287 Protein of unknown function DUF5362 BAMF_3501 89f4f93ef2b33dfd87fe92f080fabd33 128 Pfam PF17319 Family of unknown function (DUF5362) 12 107 3.6E-13 T 12-10-2018 IPR035287 Protein of unknown function DUF5362 BAMF_3555 8494faaba58abec45e794c59106b2a13 399 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 37 396 4.3E-94 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 BAMF_3555 8494faaba58abec45e794c59106b2a13 399 Gene3D G3DSA:3.30.870.10 227 395 2.3E-27 T 12-10-2018 BAMF_3555 8494faaba58abec45e794c59106b2a13 399 PIRSF PIRSF000850 292 385 0.33 T 12-10-2018 BAMF_3555 8494faaba58abec45e794c59106b2a13 399 PIRSF PIRSF000850 231 296 7.8E-5 T 12-10-2018 BAMF_3555 8494faaba58abec45e794c59106b2a13 399 PIRSF PIRSF000850 20 200 0.0063 T 12-10-2018 BAMF_3555 8494faaba58abec45e794c59106b2a13 399 SUPERFAMILY SSF56024 232 382 4.04E-37 T 12-10-2018 BAMF_3555 8494faaba58abec45e794c59106b2a13 399 Pfam PF13091 PLD-like domain 60 175 2.0E-11 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BAMF_3555 8494faaba58abec45e794c59106b2a13 399 Pfam PF13091 PLD-like domain 241 365 1.1E-26 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BAMF_3555 8494faaba58abec45e794c59106b2a13 399 Gene3D G3DSA:3.30.870.10 41 226 1.7E-36 T 12-10-2018 BAMF_3555 8494faaba58abec45e794c59106b2a13 399 SMART SM00155 312 339 4.4E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BAMF_3555 8494faaba58abec45e794c59106b2a13 399 SMART SM00155 141 168 6.8E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BAMF_3555 8494faaba58abec45e794c59106b2a13 399 SUPERFAMILY SSF56024 41 221 5.02E-41 T 12-10-2018 BAMF_2691 731c373986627df519121790aed4a2a0 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.872 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BAMF_2691 731c373986627df519121790aed4a2a0 66 Gene3D G3DSA:2.40.50.530 1 63 3.0E-21 T 12-10-2018 BAMF_2691 731c373986627df519121790aed4a2a0 66 SUPERFAMILY SSF143034 2 62 6.15E-22 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2691 731c373986627df519121790aed4a2a0 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2691 731c373986627df519121790aed4a2a0 66 Pfam PF01632 Ribosomal protein L35 2 61 6.1E-25 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2691 731c373986627df519121790aed4a2a0 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 6.5E-22 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BAMF_2691 731c373986627df519121790aed4a2a0 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 6.5E-22 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BAMF_2691 731c373986627df519121790aed4a2a0 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 6.5E-22 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BAMF_2691 731c373986627df519121790aed4a2a0 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 4.3E-26 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 SUPERFAMILY SSF53732 2 465 7.98E-169 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 PRINTS PR00415 Aconitase family signature 82 95 2.2E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 PRINTS PR00415 Aconitase family signature 195 208 2.2E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 PRINTS PR00415 Aconitase family signature 209 222 2.2E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 PRINTS PR00415 Aconitase family signature 133 148 2.2E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 PRINTS PR00415 Aconitase family signature 286 300 2.2E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 PRINTS PR00415 Aconitase family signature 119 132 2.2E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 PRINTS PR00415 Aconitase family signature 108 116 2.2E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 PRINTS PR00415 Aconitase family signature 399 412 2.2E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 PRINTS PR00415 Aconitase family signature 343 354 2.2E-46 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 2 465 3.2E-269 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 Pfam PF00330 Aconitase family (aconitate hydratase) 8 457 5.2E-158 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 Gene3D G3DSA:3.30.499.20 5 286 1.1E-102 T 12-10-2018 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 Gene3D G3DSA:3.30.499.10 325 472 3.5E-51 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BAMF_2633 454e2bdd753dc1020d8dc86db7a24a2a 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 466 59.925 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 BAMF_0350 1685474de0abe0e8aa73041d7880b3c7 252 Pfam PF00005 ABC transporter 17 164 1.9E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0350 1685474de0abe0e8aa73041d7880b3c7 252 SMART SM00382 26 213 1.3E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0350 1685474de0abe0e8aa73041d7880b3c7 252 SUPERFAMILY SSF52540 2 226 1.22E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0350 1685474de0abe0e8aa73041d7880b3c7 252 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0350 1685474de0abe0e8aa73041d7880b3c7 252 Gene3D G3DSA:3.40.50.300 1 251 2.2E-68 T 12-10-2018 BAMF_2733 7d455f884dd8ad919e9bd452793db5e7 228 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 227 36.935 T 12-10-2018 IPR022877 Protein of unknown funcion UPF0173 BAMF_2733 7d455f884dd8ad919e9bd452793db5e7 228 SMART SM00849 7 193 1.7E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_2733 7d455f884dd8ad919e9bd452793db5e7 228 Gene3D G3DSA:3.60.15.10 1 227 2.8E-71 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_2733 7d455f884dd8ad919e9bd452793db5e7 228 SUPERFAMILY SSF56281 1 208 8.52E-34 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_2733 7d455f884dd8ad919e9bd452793db5e7 228 Pfam PF13483 Beta-lactamase superfamily domain 2 193 2.2E-24 T 12-10-2018 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 SUPERFAMILY SSF53720 11 421 5.1E-89 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 224 256 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 1 422 42.622 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 PIRSF PIRSF000099 1 424 4.8E-170 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 Gene3D G3DSA:3.40.50.1980 228 344 3.8E-128 T 12-10-2018 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 Pfam PF00815 Histidinol dehydrogenase 22 421 2.8E-173 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 2.6E-90 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 PRINTS PR00083 Histidinol dehydrogenase signature 246 265 2.6E-90 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 2.6E-90 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 PRINTS PR00083 Histidinol dehydrogenase signature 130 156 2.6E-90 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 PRINTS PR00083 Histidinol dehydrogenase signature 224 245 2.6E-90 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 PRINTS PR00083 Histidinol dehydrogenase signature 29 53 2.6E-90 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 PRINTS PR00083 Histidinol dehydrogenase signature 315 340 2.6E-90 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 PRINTS PR00083 Histidinol dehydrogenase signature 356 374 2.6E-90 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 29 421 1.3E-169 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BAMF_3337 d8f5f4dd1ad3dcf78f5ef14853d42f33 427 Gene3D G3DSA:3.40.50.1980 27 226 3.8E-128 T 12-10-2018 BAMF_0397 28e1857d07f2b7bd89b8223fd72671c6 420 Pfam PF13641 Glycosyltransferase like family 2 49 279 7.3E-31 T 12-10-2018 BAMF_0397 28e1857d07f2b7bd89b8223fd72671c6 420 SUPERFAMILY SSF53448 36 319 5.34E-62 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0397 28e1857d07f2b7bd89b8223fd72671c6 420 Gene3D G3DSA:3.90.550.10 31 268 1.0E-46 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0858 908e2681a79272475935e830f8d47f25 384 Gene3D G3DSA:2.40.10.280 3 86 6.3E-13 T 12-10-2018 BAMF_0858 908e2681a79272475935e830f8d47f25 384 Gene3D G3DSA:3.55.50.40 87 184 2.1E-13 T 12-10-2018 BAMF_0858 908e2681a79272475935e830f8d47f25 384 Pfam PF06605 Prophage endopeptidase tail 31 341 1.0E-51 T 12-10-2018 IPR010572 Prophage tail endopeptidase BAMF_2585 3d5e49c9322f31022e0160f7ea10d193 201 Gene3D G3DSA:2.40.50.140 1 62 1.0E-16 T 12-10-2018 BAMF_2585 3d5e49c9322f31022e0160f7ea10d193 201 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 200 1.3E-66 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 BAMF_2585 3d5e49c9322f31022e0160f7ea10d193 201 Gene3D G3DSA:1.10.8.10 148 199 2.3E-7 T 12-10-2018 BAMF_2585 3d5e49c9322f31022e0160f7ea10d193 201 Pfam PF07499 RuvA, C-terminal domain 155 199 3.2E-12 T 12-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 BAMF_2585 3d5e49c9322f31022e0160f7ea10d193 201 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 200 28.718 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 BAMF_2585 3d5e49c9322f31022e0160f7ea10d193 201 SMART SM00278 70 89 2.3 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BAMF_2585 3d5e49c9322f31022e0160f7ea10d193 201 SMART SM00278 105 124 0.7 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BAMF_2585 3d5e49c9322f31022e0160f7ea10d193 201 SUPERFAMILY SSF50249 2 60 3.26E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_2585 3d5e49c9322f31022e0160f7ea10d193 201 SUPERFAMILY SSF47781 62 134 1.11E-20 T 12-10-2018 IPR010994 RuvA domain 2-like BAMF_2585 3d5e49c9322f31022e0160f7ea10d193 201 Pfam PF14520 Helix-hairpin-helix domain 69 126 4.4E-14 T 12-10-2018 BAMF_2585 3d5e49c9322f31022e0160f7ea10d193 201 Gene3D G3DSA:1.10.150.20 64 137 3.7E-24 T 12-10-2018 BAMF_2585 3d5e49c9322f31022e0160f7ea10d193 201 Pfam PF01330 RuvA N terminal domain 2 59 2.7E-18 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 BAMF_2585 3d5e49c9322f31022e0160f7ea10d193 201 SUPERFAMILY SSF46929 154 199 1.16E-8 T 12-10-2018 IPR036267 RuvA, C-terminal domain superfamily BAMF_2995 9ab59594c66ae6e109c00a4857208593 398 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 107 390 4.1E-86 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 BAMF_2995 9ab59594c66ae6e109c00a4857208593 398 Pfam PF00425 chorismate binding enzyme 125 383 1.7E-76 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BAMF_2995 9ab59594c66ae6e109c00a4857208593 398 Gene3D G3DSA:3.60.120.10 5 398 3.5E-132 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BAMF_2995 9ab59594c66ae6e109c00a4857208593 398 SUPERFAMILY SSF56322 49 393 6.93E-89 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BAMF_0306 5ce8069a4e98aef016144d8f160a39e8 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 1.3E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_0306 5ce8069a4e98aef016144d8f160a39e8 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 1.3E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_0306 5ce8069a4e98aef016144d8f160a39e8 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 1.3E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_0306 5ce8069a4e98aef016144d8f160a39e8 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 395 406 1.3E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_0306 5ce8069a4e98aef016144d8f160a39e8 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 374 382 1.3E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_0306 5ce8069a4e98aef016144d8f160a39e8 478 SUPERFAMILY SSF51445 8 476 6.65E-173 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_0306 5ce8069a4e98aef016144d8f160a39e8 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 374 382 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site BAMF_0306 5ce8069a4e98aef016144d8f160a39e8 478 Gene3D G3DSA:3.20.20.80 2 478 2.1E-183 T 12-10-2018 BAMF_0306 5ce8069a4e98aef016144d8f160a39e8 478 Pfam PF00232 Glycosyl hydrolase family 1 8 475 3.7E-186 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_0306 5ce8069a4e98aef016144d8f160a39e8 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BAMF_1113 a71395f21b21d63b89a0f61733c60631 244 SMART SM00849 18 211 1.3E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_1113 a71395f21b21d63b89a0f61733c60631 244 SUPERFAMILY SSF56281 1 242 1.17E-52 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_1113 a71395f21b21d63b89a0f61733c60631 244 Gene3D G3DSA:3.60.15.10 1 244 5.7E-84 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_1113 a71395f21b21d63b89a0f61733c60631 244 Pfam PF12706 Beta-lactamase superfamily domain 31 211 5.5E-19 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_0517 b56a31d0f9e7b07c64019a9ef6e2ef1b 228 Gene3D G3DSA:1.20.120.530 89 220 4.3E-28 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BAMF_0517 b56a31d0f9e7b07c64019a9ef6e2ef1b 228 SMART SM00345 15 74 1.8E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0517 b56a31d0f9e7b07c64019a9ef6e2ef1b 228 Pfam PF07729 FCD domain 95 213 2.0E-23 T 12-10-2018 IPR011711 GntR, C-terminal BAMF_0517 b56a31d0f9e7b07c64019a9ef6e2ef1b 228 SMART SM00895 95 215 1.6E-23 T 12-10-2018 IPR011711 GntR, C-terminal BAMF_0517 b56a31d0f9e7b07c64019a9ef6e2ef1b 228 SUPERFAMILY SSF46785 5 109 4.38E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0517 b56a31d0f9e7b07c64019a9ef6e2ef1b 228 SUPERFAMILY SSF48008 92 220 1.7E-26 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BAMF_0517 b56a31d0f9e7b07c64019a9ef6e2ef1b 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.8E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0517 b56a31d0f9e7b07c64019a9ef6e2ef1b 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.2E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0517 b56a31d0f9e7b07c64019a9ef6e2ef1b 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.2E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0517 b56a31d0f9e7b07c64019a9ef6e2ef1b 228 Gene3D G3DSA:1.10.10.10 1 75 2.9E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2349 e47a92dfccee8d80b3916cebe3868dc5 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site BAMF_2349 e47a92dfccee8d80b3916cebe3868dc5 185 Gene3D G3DSA:2.40.50.140 128 185 7.7E-27 T 12-10-2018 BAMF_2349 e47a92dfccee8d80b3916cebe3868dc5 185 Gene3D G3DSA:2.30.30.30 1 62 9.1E-32 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 BAMF_2349 e47a92dfccee8d80b3916cebe3868dc5 185 SMART SM01185 67 121 1.1E-23 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BAMF_2349 e47a92dfccee8d80b3916cebe3868dc5 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 2.5E-26 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BAMF_2349 e47a92dfccee8d80b3916cebe3868dc5 185 SUPERFAMILY SSF50249 128 185 1.37E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_2349 e47a92dfccee8d80b3916cebe3868dc5 185 Gene3D G3DSA:2.40.50.140 64 127 8.9E-25 T 12-10-2018 BAMF_2349 e47a92dfccee8d80b3916cebe3868dc5 185 SUPERFAMILY SSF50249 65 129 5.83E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_2349 e47a92dfccee8d80b3916cebe3868dc5 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 119 9.1E-20 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BAMF_2349 e47a92dfccee8d80b3916cebe3868dc5 185 SMART SM00841 129 184 2.1E-33 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BAMF_2349 e47a92dfccee8d80b3916cebe3868dc5 185 SUPERFAMILY SSF50104 1 62 4.63E-22 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily BAMF_2349 e47a92dfccee8d80b3916cebe3868dc5 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 7.3E-29 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like BAMF_2349 e47a92dfccee8d80b3916cebe3868dc5 185 PIRSF PIRSF005901 1 185 3.0E-71 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP BAMF_2349 e47a92dfccee8d80b3916cebe3868dc5 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 3.5E-80 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 BAMF_2349 e47a92dfccee8d80b3916cebe3868dc5 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 50.485 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 BAMF_2274 b75c530b1864721ae51852fe2dff22a3 449 Gene3D G3DSA:3.40.50.1100 24 435 1.8E-181 T 12-10-2018 BAMF_2274 b75c530b1864721ae51852fe2dff22a3 449 Gene3D G3DSA:3.40.50.1100 114 236 1.8E-181 T 12-10-2018 BAMF_2274 b75c530b1864721ae51852fe2dff22a3 449 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 10 435 1.5E-212 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 BAMF_2274 b75c530b1864721ae51852fe2dff22a3 449 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 106 120 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BAMF_2274 b75c530b1864721ae51852fe2dff22a3 449 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 449 231.596 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 BAMF_2274 b75c530b1864721ae51852fe2dff22a3 449 SUPERFAMILY SSF53686 43 436 2.06E-50 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BAMF_2274 b75c530b1864721ae51852fe2dff22a3 449 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 75 395 3.0E-47 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Pfam PF00550 Phosphopantetheine attachment site 2001 2062 1.6E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Pfam PF00550 Phosphopantetheine attachment site 973 1034 2.1E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Gene3D G3DSA:3.40.50.12780 454 860 3.2E-130 T 12-10-2018 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 SUPERFAMILY SSF52777 2268 2526 1.33E-28 T 12-10-2018 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Pfam PF00501 AMP-binding enzyme 466 868 7.3E-97 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Pfam PF00501 AMP-binding enzyme 1501 1891 4.1E-98 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 SUPERFAMILY SSF56801 422 983 4.97E-155 T 12-10-2018 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Gene3D G3DSA:3.30.559.30 193 450 9.1E-44 T 12-10-2018 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 SUPERFAMILY SSF47336 1992 2063 4.84E-17 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2394 2551 7.4E-39 T 12-10-2018 IPR010060 Non-ribosomal peptide synthase BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 SUPERFAMILY SSF52777 1051 1234 4.0E-42 T 12-10-2018 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Gene3D G3DSA:3.30.559.10 8 192 1.9E-35 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Pfam PF13193 AMP-binding enzyme C-terminal domain 1899 1972 4.9E-12 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Pfam PF13193 AMP-binding enzyme C-terminal domain 876 945 3.7E-7 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Gene3D G3DSA:3.30.559.30 2250 2531 3.0E-60 T 12-10-2018 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 SUPERFAMILY SSF52777 187 447 5.11E-37 T 12-10-2018 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Gene3D G3DSA:3.40.50.12780 1485 1885 1.9E-131 T 12-10-2018 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Gene3D G3DSA:3.30.300.30 863 957 3.5E-29 T 12-10-2018 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Gene3D G3DSA:3.30.300.30 1886 1984 1.5E-32 T 12-10-2018 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 SUPERFAMILY SSF56801 1457 2011 7.98E-155 T 12-10-2018 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1638 1649 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 ProSitePatterns PS00455 Putative AMP-binding domain signature. 603 614 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Gene3D G3DSA:3.30.559.10 2068 2249 6.7E-54 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Pfam PF00668 Condensation domain 3 442 2.3E-109 T 12-10-2018 IPR001242 Condensation domain BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Pfam PF00668 Condensation domain 2076 2544 2.4E-97 T 12-10-2018 IPR001242 Condensation domain BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Pfam PF00668 Condensation domain 1053 1477 4.6E-136 T 12-10-2018 IPR001242 Condensation domain BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 SUPERFAMILY SSF52777 8 181 5.89E-33 T 12-10-2018 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Gene3D G3DSA:3.30.559.10 1057 1408 2.3E-151 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Gene3D G3DSA:3.30.559.30 1218 1463 2.3E-151 T 12-10-2018 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 485 892 6.3E-130 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1520 1915 3.7E-133 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Gene3D G3DSA:1.10.1200.10 1985 2067 6.4E-22 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 Gene3D G3DSA:1.10.1200.10 958 1043 5.3E-25 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 SUPERFAMILY SSF47336 963 1036 3.27E-18 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 SMART SM00823 Phosphopantetheine attachment site 971 1040 0.002 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 SMART SM00823 Phosphopantetheine attachment site 1999 2067 0.0022 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 SUPERFAMILY SSF52777 1221 1462 1.78E-66 T 12-10-2018 BAMF_1939 360b87390fb051095b11eb7254ceaf24 2558 SUPERFAMILY SSF52777 2073 2254 1.45E-35 T 12-10-2018 BAMF_3162 3358bb41a01defd8d048e3fbde9e2553 580 Pfam PF00512 His Kinase A (phospho-acceptor) domain 357 417 1.1E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_3162 3358bb41a01defd8d048e3fbde9e2553 580 Gene3D G3DSA:1.10.287.130 330 421 2.3E-13 T 12-10-2018 BAMF_3162 3358bb41a01defd8d048e3fbde9e2553 580 SMART SM00388 356 424 2.1E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_3162 3358bb41a01defd8d048e3fbde9e2553 580 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 471 578 2.8E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3162 3358bb41a01defd8d048e3fbde9e2553 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 559 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3162 3358bb41a01defd8d048e3fbde9e2553 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 578 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3162 3358bb41a01defd8d048e3fbde9e2553 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 535 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3162 3358bb41a01defd8d048e3fbde9e2553 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 521 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3162 3358bb41a01defd8d048e3fbde9e2553 580 Gene3D G3DSA:3.30.565.10 431 580 1.6E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3162 3358bb41a01defd8d048e3fbde9e2553 580 SUPERFAMILY SSF47384 339 422 5.3E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_3162 3358bb41a01defd8d048e3fbde9e2553 580 SUPERFAMILY SSF55874 414 578 2.62E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3162 3358bb41a01defd8d048e3fbde9e2553 580 SMART SM00387 470 580 2.5E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2684 e55d59de0d9b5bd63aa5fe53d08c5f95 561 SUPERFAMILY SSF53067 3 280 1.74E-40 T 12-10-2018 BAMF_2684 e55d59de0d9b5bd63aa5fe53d08c5f95 561 Gene3D G3DSA:3.30.420.40 1 279 5.9E-71 T 12-10-2018 BAMF_2684 e55d59de0d9b5bd63aa5fe53d08c5f95 561 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 274 3.8E-15 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BAMF_2684 e55d59de0d9b5bd63aa5fe53d08c5f95 561 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 288 486 4.4E-42 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BAMF_2684 e55d59de0d9b5bd63aa5fe53d08c5f95 561 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 2 540 1.8E-273 T 12-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 BAMF_2684 e55d59de0d9b5bd63aa5fe53d08c5f95 561 Hamap MF_00520 Ribulokinase [araB]. 1 546 52.373 T 12-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 BAMF_2684 e55d59de0d9b5bd63aa5fe53d08c5f95 561 SUPERFAMILY SSF53067 280 537 2.33E-58 T 12-10-2018 BAMF_2684 e55d59de0d9b5bd63aa5fe53d08c5f95 561 PIRSF PIRSF000538 1 541 4.4E-65 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BAMF_2684 e55d59de0d9b5bd63aa5fe53d08c5f95 561 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 397 417 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BAMF_2684 e55d59de0d9b5bd63aa5fe53d08c5f95 561 Gene3D G3DSA:3.30.420.40 280 549 2.9E-83 T 12-10-2018 BAMF_3310 a5aff4b75cf040aab12ee33148b230d5 376 Pfam PF04303 PrpF protein 2 364 4.7E-137 T 12-10-2018 IPR007400 PrpF protein BAMF_3310 a5aff4b75cf040aab12ee33148b230d5 376 SUPERFAMILY SSF54506 3 165 4.94E-62 T 12-10-2018 BAMF_3310 a5aff4b75cf040aab12ee33148b230d5 376 SUPERFAMILY SSF54506 170 366 1.24E-53 T 12-10-2018 BAMF_3310 a5aff4b75cf040aab12ee33148b230d5 376 Gene3D G3DSA:3.10.310.10 166 348 1.5E-134 T 12-10-2018 BAMF_3310 a5aff4b75cf040aab12ee33148b230d5 376 Gene3D G3DSA:3.10.310.10 4 362 1.5E-134 T 12-10-2018 BAMF_2951 1e2b95485ac4da55c16d1252d5a4ecbb 185 Pfam PF17328 Family of unknown function (DUF5366) 29 184 1.7E-62 T 12-10-2018 IPR035289 Protein of unknown function DUF5366 BAMF_2951 1e2b95485ac4da55c16d1252d5a4ecbb 185 ProDom PD108804 YUFK TRANSMEMBRANE MEMBRANE PRECURSOR SIGNAL 1 185 3.0E-65 T 12-10-2018 IPR035289 Protein of unknown function DUF5366 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 84 635 4.9E-181 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 SUPERFAMILY SSF81653 137 234 1.96E-27 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 SUPERFAMILY SSF81665 86 613 3.53E-16 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 337 343 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 Pfam PF00702 haloacid dehalogenase-like hydrolase 332 547 3.5E-38 T 12-10-2018 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 Gene3D G3DSA:2.70.150.20 128 239 4.9E-37 T 12-10-2018 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 107 612 1.9E-83 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 Gene3D G3DSA:3.40.1110.10 346 465 2.7E-84 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 Pfam PF00122 E1-E2 ATPase 134 313 8.5E-51 T 12-10-2018 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 SUPERFAMILY SSF56784 333 632 5.21E-55 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 PRINTS PR00941 Cadmium-transporting ATPase signature 47 64 2.3E-11 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 PRINTS PR00941 Cadmium-transporting ATPase signature 64 76 2.3E-11 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 PRINTS PR00941 Cadmium-transporting ATPase signature 119 139 2.3E-11 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 PRINTS PR00941 Cadmium-transporting ATPase signature 200 216 2.3E-11 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 PRINTS PR00941 Cadmium-transporting ATPase signature 219 233 2.3E-11 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 533 552 8.1E-30 T 12-10-2018 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 184 198 8.1E-30 T 12-10-2018 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 556 568 8.1E-30 T 12-10-2018 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 335 349 8.1E-30 T 12-10-2018 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 458 469 8.1E-30 T 12-10-2018 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 480 490 8.1E-30 T 12-10-2018 BAMF_1462 6da65a9b7c35ff9c318e402fe9268965 637 Gene3D G3DSA:3.40.50.1000 316 584 2.7E-84 T 12-10-2018 IPR023214 HAD superfamily BAMF_3866 0125d8449c1e417ebb0569e3795fa512 424 Pfam PF00534 Glycosyl transferases group 1 241 400 1.1E-34 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 BAMF_3866 0125d8449c1e417ebb0569e3795fa512 424 Gene3D G3DSA:3.40.50.2000 59 416 1.3E-70 T 12-10-2018 BAMF_3866 0125d8449c1e417ebb0569e3795fa512 424 Gene3D G3DSA:3.40.50.2000 236 407 1.3E-70 T 12-10-2018 BAMF_3866 0125d8449c1e417ebb0569e3795fa512 424 SUPERFAMILY SSF53756 47 423 1.37E-76 T 12-10-2018 BAMF_3866 0125d8449c1e417ebb0569e3795fa512 424 Pfam PF13439 Glycosyltransferase Family 4 59 238 4.5E-18 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 Gene3D G3DSA:2.60.260.20 256 335 5.4E-31 T 12-10-2018 BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 Gene3D G3DSA:2.60.260.20 115 251 1.0E-36 T 12-10-2018 BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 Pfam PF00684 DnaJ central domain 145 209 1.3E-13 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 Gene3D G3DSA:2.10.230.10 145 209 1.0E-36 T 12-10-2018 BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 PRINTS PR00625 DnaJ domain signature 25 40 7.6E-32 T 12-10-2018 IPR001623 DnaJ domain BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 PRINTS PR00625 DnaJ domain signature 41 61 7.6E-32 T 12-10-2018 IPR001623 DnaJ domain BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 PRINTS PR00625 DnaJ domain signature 7 25 7.6E-32 T 12-10-2018 IPR001623 DnaJ domain BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 PRINTS PR00625 DnaJ domain signature 61 80 7.6E-32 T 12-10-2018 IPR001623 DnaJ domain BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 41.48 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 SMART SM00271 4 61 4.0E-30 T 12-10-2018 IPR001623 DnaJ domain BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 12-10-2018 IPR018253 DnaJ domain, conserved site BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 SUPERFAMILY SSF57938 132 213 6.54E-18 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 SUPERFAMILY SSF49493 260 346 4.06E-26 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 Gene3D G3DSA:1.10.287.110 1 110 1.8E-38 T 12-10-2018 IPR036869 Chaperone J-domain superfamily BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 SUPERFAMILY SSF49493 112 259 3.92E-20 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 1.3E-140 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 Pfam PF00226 DnaJ domain 5 66 6.5E-27 T 12-10-2018 IPR001623 DnaJ domain BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 SUPERFAMILY SSF46565 1 101 4.58E-37 T 12-10-2018 IPR036869 Chaperone J-domain superfamily BAMF_2443 4662c7c5c13925eee2d3395760eba8de 375 Pfam PF01556 DnaJ C terminal domain 118 335 4.3E-44 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal BAMF_3038 8ad927f85891368e69bb5e6bde192b53 252 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 14 232 1.6E-70 T 12-10-2018 IPR014197 Sporulation protein YunB BAMF_3038 8ad927f85891368e69bb5e6bde192b53 252 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 139 228 1.9E-30 T 12-10-2018 IPR014197 Sporulation protein YunB BAMF_3038 8ad927f85891368e69bb5e6bde192b53 252 PIRSF PIRSF021383 1 245 1.6E-106 T 12-10-2018 IPR014197 Sporulation protein YunB BAMF_2775 6d6c6c04fef77ef3a6026794c2ee1b0b 358 Gene3D G3DSA:3.20.20.70 93 357 8.0E-103 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_2775 6d6c6c04fef77ef3a6026794c2ee1b0b 358 SUPERFAMILY SSF51569 26 353 2.2E-103 T 12-10-2018 BAMF_2775 6d6c6c04fef77ef3a6026794c2ee1b0b 358 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 95 351 2.5E-121 T 12-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BAMF_2775 6d6c6c04fef77ef3a6026794c2ee1b0b 358 TIGRFAM TIGR01801 CM_A: chorismate mutase 1 101 1.9E-48 T 12-10-2018 IPR010954 Chorismate mutase, Firmicutes/Deinococcus KEGG: 00400+2.5.1.54+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6164|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BAMF_2775 6d6c6c04fef77ef3a6026794c2ee1b0b 358 Pfam PF01817 Chorismate mutase type II 10 87 2.1E-17 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BAMF_2775 6d6c6c04fef77ef3a6026794c2ee1b0b 358 Gene3D G3DSA:1.20.59.10 8 92 6.6E-27 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BAMF_2775 6d6c6c04fef77ef3a6026794c2ee1b0b 358 Pfam PF00793 DAHP synthetase I family 111 354 2.4E-84 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BAMF_2775 6d6c6c04fef77ef3a6026794c2ee1b0b 358 SMART SM00830 10 89 8.3E-20 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BAMF_1732 f82dc59117834239d64203efa486e60d 373 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 341 8.2E-131 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 BAMF_1732 f82dc59117834239d64203efa486e60d 373 Gene3D G3DSA:3.30.300.20 198 276 1.0E-33 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BAMF_1732 f82dc59117834239d64203efa486e60d 373 SMART SM00322 229 301 1.5E-5 T 12-10-2018 IPR004087 K Homology domain GO:0003676 BAMF_1732 f82dc59117834239d64203efa486e60d 373 SMART SM00322 302 360 22.0 T 12-10-2018 IPR004087 K Homology domain GO:0003676 BAMF_1732 f82dc59117834239d64203efa486e60d 373 Gene3D G3DSA:3.30.300.20 277 371 1.3E-32 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BAMF_1732 f82dc59117834239d64203efa486e60d 373 SUPERFAMILY SSF54814 278 341 1.31E-16 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BAMF_1732 f82dc59117834239d64203efa486e60d 373 Pfam PF00575 S1 RNA binding domain 133 195 1.4E-11 T 12-10-2018 IPR003029 S1 domain GO:0003676 BAMF_1732 f82dc59117834239d64203efa486e60d 373 Pfam PF08529 NusA N-terminal domain 4 123 2.5E-46 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 BAMF_1732 f82dc59117834239d64203efa486e60d 373 SUPERFAMILY SSF50249 132 198 1.27E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_1732 f82dc59117834239d64203efa486e60d 373 Pfam PF13184 NusA-like KH domain 229 296 6.2E-29 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 BAMF_1732 f82dc59117834239d64203efa486e60d 373 SMART SM00316 133 199 9.2E-11 T 12-10-2018 IPR022967 RNA-binding domain, S1 BAMF_1732 f82dc59117834239d64203efa486e60d 373 SUPERFAMILY SSF54814 199 277 1.63E-30 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BAMF_1732 f82dc59117834239d64203efa486e60d 373 Gene3D G3DSA:2.40.50.140 136 197 2.1E-24 T 12-10-2018 BAMF_1732 f82dc59117834239d64203efa486e60d 373 Gene3D G3DSA:3.30.1480.10 1 124 9.5E-52 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 BAMF_1732 f82dc59117834239d64203efa486e60d 373 SUPERFAMILY SSF69705 1 126 4.45E-45 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 BAMF_1732 f82dc59117834239d64203efa486e60d 373 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 373 30.729 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 BAMF_1051 bc1317a9d36a40ccc97cfee03405bc32 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 368 1.2E-26 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1051 bc1317a9d36a40ccc97cfee03405bc32 414 Gene3D G3DSA:3.40.47.10 2 259 4.8E-53 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1051 bc1317a9d36a40ccc97cfee03405bc32 414 Gene3D G3DSA:3.40.47.10 266 412 1.1E-35 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1051 bc1317a9d36a40ccc97cfee03405bc32 414 SMART SM00825 Beta-ketoacyl synthase 11 410 6.9E-11 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1051 bc1317a9d36a40ccc97cfee03405bc32 414 SUPERFAMILY SSF53901 220 409 6.29E-51 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1051 bc1317a9d36a40ccc97cfee03405bc32 414 SUPERFAMILY SSF53901 10 256 9.22E-46 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1051 bc1317a9d36a40ccc97cfee03405bc32 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 9 251 7.4E-34 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_0110 bf5eadaf33cf4c9e9ff2650dcbe551f2 138 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 40.782 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0110 bf5eadaf33cf4c9e9ff2650dcbe551f2 138 PIRSF PIRSF002133 1 137 2.3E-49 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0110 bf5eadaf33cf4c9e9ff2650dcbe551f2 138 PRINTS PR01034 Ribosomal protein S12 signature 40 55 1.7E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0110 bf5eadaf33cf4c9e9ff2650dcbe551f2 138 PRINTS PR01034 Ribosomal protein S12 signature 71 90 1.7E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0110 bf5eadaf33cf4c9e9ff2650dcbe551f2 138 PRINTS PR01034 Ribosomal protein S12 signature 90 107 1.7E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0110 bf5eadaf33cf4c9e9ff2650dcbe551f2 138 PRINTS PR01034 Ribosomal protein S12 signature 107 123 1.7E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0110 bf5eadaf33cf4c9e9ff2650dcbe551f2 138 PRINTS PR01034 Ribosomal protein S12 signature 55 70 1.7E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0110 bf5eadaf33cf4c9e9ff2650dcbe551f2 138 PRINTS PR01034 Ribosomal protein S12 signature 123 135 1.7E-59 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0110 bf5eadaf33cf4c9e9ff2650dcbe551f2 138 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 137 2.2E-69 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0110 bf5eadaf33cf4c9e9ff2650dcbe551f2 138 SUPERFAMILY SSF50249 2 136 2.83E-49 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_0110 bf5eadaf33cf4c9e9ff2650dcbe551f2 138 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0110 bf5eadaf33cf4c9e9ff2650dcbe551f2 138 Gene3D G3DSA:2.40.50.140 1 138 9.6E-63 T 12-10-2018 BAMF_0110 bf5eadaf33cf4c9e9ff2650dcbe551f2 138 Pfam PF00164 Ribosomal protein S12/S23 36 136 4.6E-38 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_3309 d0f03ef7f0c31a242b64e3f3b88ce195 286 Pfam PF03466 LysR substrate binding domain 87 284 1.0E-29 T 12-10-2018 IPR005119 LysR, substrate-binding BAMF_3309 d0f03ef7f0c31a242b64e3f3b88ce195 286 Gene3D G3DSA:1.10.10.10 1 80 6.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3309 d0f03ef7f0c31a242b64e3f3b88ce195 286 Gene3D G3DSA:3.40.190.290 81 283 4.2E-74 T 12-10-2018 BAMF_3309 d0f03ef7f0c31a242b64e3f3b88ce195 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.3E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3309 d0f03ef7f0c31a242b64e3f3b88ce195 286 SUPERFAMILY SSF53850 88 284 1.27E-28 T 12-10-2018 BAMF_3309 d0f03ef7f0c31a242b64e3f3b88ce195 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3309 d0f03ef7f0c31a242b64e3f3b88ce195 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3309 d0f03ef7f0c31a242b64e3f3b88ce195 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3309 d0f03ef7f0c31a242b64e3f3b88ce195 286 SUPERFAMILY SSF46785 1 111 9.33E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0686 efb4c9c2ef9d345fa01071922e28ed91 108 SUPERFAMILY SSF54909 1 99 1.61E-23 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BAMF_0686 efb4c9c2ef9d345fa01071922e28ed91 108 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 78 7.2E-17 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain BAMF_0686 efb4c9c2ef9d345fa01071922e28ed91 108 Gene3D G3DSA:3.30.70.100 1 107 2.7E-42 T 12-10-2018 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 SUPERFAMILY SSF56300 41 373 5.7E-83 T 12-10-2018 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 PRINTS PR01607 Apyrase family signature 668 686 1.1E-41 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 PRINTS PR01607 Apyrase family signature 882 905 1.1E-41 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 PRINTS PR01607 Apyrase family signature 1114 1133 1.1E-41 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 PRINTS PR01607 Apyrase family signature 913 933 1.1E-41 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 PRINTS PR01607 Apyrase family signature 863 880 1.1E-41 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 PRINTS PR01607 Apyrase family signature 1036 1059 1.1E-41 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 Gene3D G3DSA:3.60.21.10 668 977 1.4E-89 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 Pfam PF02872 5'-nucleotidase, C-terminal domain 375 573 3.6E-24 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 Pfam PF02872 5'-nucleotidase, C-terminal domain 978 1140 1.3E-46 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 ProSitePatterns PS00786 5'-nucleotidase signature 2. 134 145 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 SUPERFAMILY SSF55816 375 611 1.83E-45 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 SUPERFAMILY SSF56300 664 975 1.47E-76 T 12-10-2018 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 Gene3D G3DSA:3.90.780.10 978 1180 8.6E-69 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 ProSitePatterns PS00785 5'-nucleotidase signature 1. 670 682 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 Pfam PF00149 Calcineurin-like phosphoesterase 670 899 3.9E-15 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 Pfam PF00149 Calcineurin-like phosphoesterase 46 284 1.1E-14 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 SUPERFAMILY SSF55816 976 1176 1.31E-58 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 Gene3D G3DSA:3.90.780.10 422 610 1.5E-58 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 ProSitePatterns PS00785 5'-nucleotidase signature 1. 45 57 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_0752 eba932fe392d3129ad2ec9e9aa743e9a 1430 Gene3D G3DSA:3.60.21.10 35 374 2.4E-141 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BAMF_0846 64713fa4454578b5d24e6c339f32de15 596 Gene3D G3DSA:3.40.50.300 84 287 2.6E-21 T 12-10-2018 BAMF_0846 64713fa4454578b5d24e6c339f32de15 596 Pfam PF03354 Phage Terminase 112 569 9.4E-68 T 12-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 235 250 - T 12-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 388 401 3.8E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 3.8E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 3.8E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 198 211 3.8E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 287 306 3.8E-18 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 39 296 5.9E-78 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 SUPERFAMILY SSF50621 273 431 1.11E-54 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 33 388 4.1E-18 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 9 430 8.2E-164 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 398 420 1.1E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 81 98 1.1E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 316 334 1.1E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 170 179 1.1E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 Gene3D G3DSA:3.20.20.10 38 297 7.3E-162 T 12-10-2018 IPR029066 PLP-binding barrel BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 19 431 42.181 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 SUPERFAMILY SSF51419 30 299 5.09E-82 T 12-10-2018 IPR029066 PLP-binding barrel BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 Gene3D G3DSA:2.40.37.10 17 427 7.3E-162 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BAMF_2233 84751856a6b981a35dd4f554c79d3e40 439 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 63 81 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site BAMF_2692 893c931e9b583656185bbaa9380be386 167 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 78 163 2.6E-38 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 BAMF_2692 893c931e9b583656185bbaa9380be386 167 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 165 29.742 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BAMF_2692 893c931e9b583656185bbaa9380be386 167 Gene3D G3DSA:3.30.110.10 74 167 9.3E-38 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 BAMF_2692 893c931e9b583656185bbaa9380be386 167 Gene3D G3DSA:3.10.20.80 1 73 1.1E-33 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BAMF_2692 893c931e9b583656185bbaa9380be386 167 SUPERFAMILY SSF55200 77 166 1.57E-33 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 BAMF_2692 893c931e9b583656185bbaa9380be386 167 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 71 3.8E-32 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BAMF_2692 893c931e9b583656185bbaa9380be386 167 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 164 3.0E-78 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BAMF_2692 893c931e9b583656185bbaa9380be386 167 SUPERFAMILY SSF54364 2 73 4.18E-29 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BAMF_2692 893c931e9b583656185bbaa9380be386 167 ProSitePatterns PS00938 Initiation factor 3 signature. 53 66 - T 12-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 BAMF_2803 a1edd1bf463222e0a9458c5d9c571767 545 Pfam PF01943 Polysaccharide biosynthesis protein 5 319 6.1E-75 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 BAMF_2803 a1edd1bf463222e0a9458c5d9c571767 545 PIRSF PIRSF038958 1 541 1.3E-156 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type BAMF_2803 a1edd1bf463222e0a9458c5d9c571767 545 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 375 523 1.5E-29 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BAMF_0599 00732a2eee9ea5688a99f1ea78b368f6 92 Pfam PF10779 Haemolysin XhlA 13 77 4.3E-20 T 12-10-2018 IPR019715 Haemolysin XhlA BAMF_2612 360252174d75f028f85816d3d476cece 333 Gene3D G3DSA:3.30.70.1070 181 248 1.2E-7 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BAMF_2612 360252174d75f028f85816d3d476cece 333 SUPERFAMILY SSF110997 180 245 1.14E-8 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BAMF_2612 360252174d75f028f85816d3d476cece 333 Pfam PF05036 Sporulation related domain 179 237 6.8E-9 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 BAMF_2725 e52839b5a02f10de28570195dd248cfb 410 SMART SM01274 15 148 5.2E-85 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BAMF_2725 e52839b5a02f10de28570195dd248cfb 410 SUPERFAMILY SSF51735 160 405 9.24E-85 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2725 e52839b5a02f10de28570195dd248cfb 410 SUPERFAMILY SSF53223 6 158 3.24E-57 T 12-10-2018 BAMF_2725 e52839b5a02f10de28570195dd248cfb 410 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 BAMF_2725 e52839b5a02f10de28570195dd248cfb 410 Pfam PF00390 Malic enzyme, N-terminal domain 16 148 1.6E-30 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BAMF_2725 e52839b5a02f10de28570195dd248cfb 410 PRINTS PR00072 Malic enzyme signature 187 203 1.5E-8 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_2725 e52839b5a02f10de28570195dd248cfb 410 PRINTS PR00072 Malic enzyme signature 77 99 1.5E-8 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_2725 e52839b5a02f10de28570195dd248cfb 410 PRINTS PR00072 Malic enzyme signature 156 172 1.5E-8 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_2725 e52839b5a02f10de28570195dd248cfb 410 Gene3D G3DSA:3.40.50.720 158 410 5.7E-89 T 12-10-2018 BAMF_2725 e52839b5a02f10de28570195dd248cfb 410 SMART SM00919 160 384 5.7E-134 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BAMF_2725 e52839b5a02f10de28570195dd248cfb 410 Pfam PF03949 Malic enzyme, NAD binding domain 162 383 8.3E-26 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BAMF_2725 e52839b5a02f10de28570195dd248cfb 410 Gene3D G3DSA:3.40.50.10380 1 157 6.7E-75 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 BAMF_2725 e52839b5a02f10de28570195dd248cfb 410 PIRSF PIRSF000106 42 407 1.5E-86 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_1567 6d00ce269d747830e213721ca496e786 297 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 31 278 7.0E-63 T 12-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related BAMF_1567 6d00ce269d747830e213721ca496e786 297 TIGRFAM TIGR02737 caa3_CtaG: cytochrome c oxidase assembly factor CtaG 6 280 1.9E-121 T 12-10-2018 IPR014108 Cytochrome c oxidase caa3 type assembly factor CtaG BAMF_2175 fe0df8eb3a9ff61c4f46fa7f2d76e66a 320 Gene3D G3DSA:1.10.600.10 7 320 8.7E-100 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BAMF_2175 fe0df8eb3a9ff61c4f46fa7f2d76e66a 320 TIGRFAM TIGR02748 GerC3_HepT: heptaprenyl diphosphate synthase component II 2 320 3.5E-173 T 12-10-2018 IPR014119 Heptaprenyl diphosphate synthase component II KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 BAMF_2175 fe0df8eb3a9ff61c4f46fa7f2d76e66a 320 SUPERFAMILY SSF48576 7 319 8.96E-88 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BAMF_2175 fe0df8eb3a9ff61c4f46fa7f2d76e66a 320 Pfam PF00348 Polyprenyl synthetase 31 261 1.9E-68 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 BAMF_2175 fe0df8eb3a9ff61c4f46fa7f2d76e66a 320 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site BAMF_2175 fe0df8eb3a9ff61c4f46fa7f2d76e66a 320 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site BAMF_1874 ad23a67e9b0b1ae626f2b9b4c53d8c5a 77 SUPERFAMILY SSF158221 1 42 3.79E-14 T 12-10-2018 BAMF_1874 ad23a67e9b0b1ae626f2b9b4c53d8c5a 77 Hamap MF_01103 UPF0291 protein . 2 60 16.749 T 12-10-2018 IPR009242 Protein of unknown function DUF896 BAMF_1874 ad23a67e9b0b1ae626f2b9b4c53d8c5a 77 Pfam PF05979 Bacterial protein of unknown function (DUF896) 5 68 2.3E-31 T 12-10-2018 IPR009242 Protein of unknown function DUF896 BAMF_1874 ad23a67e9b0b1ae626f2b9b4c53d8c5a 77 Gene3D G3DSA:1.10.287.540 1 56 8.3E-26 T 12-10-2018 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 Gene3D G3DSA:1.20.990.10 716 838 3.2E-68 T 12-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 Pfam PF00667 FAD binding domain 674 880 3.0E-36 T 12-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 Pfam PF00067 Cytochrome P450 12 447 2.6E-85 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 Gene3D G3DSA:1.10.630.10 4 473 2.7E-169 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 984 1000 2.6E-33 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 840 847 2.6E-33 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1007 1015 2.6E-33 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 706 716 2.6E-33 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 875 884 2.6E-33 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 912 931 2.6E-33 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 953 964 2.6E-33 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 941 950 2.6E-33 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 Gene3D G3DSA:3.40.50.360 490 641 1.3E-43 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 SUPERFAMILY SSF48264 5 454 9.82E-111 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 PRINTS PR00369 Flavodoxin signature 494 507 3.4E-12 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 PRINTS PR00369 Flavodoxin signature 597 616 3.4E-12 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 PRINTS PR00369 Flavodoxin signature 572 582 3.4E-12 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 Gene3D G3DSA:2.40.30.10 681 888 3.2E-68 T 12-10-2018 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 SUPERFAMILY SSF52218 489 644 2.93E-42 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 Gene3D G3DSA:3.40.50.80 901 1060 4.0E-57 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 396 405 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 SUPERFAMILY SSF63380 673 896 6.54E-62 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 PIRSF PIRSF000209 1 1061 0.0 T 12-10-2018 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase GO:0003958|GO:0055114|GO:0070330 KEGG: 00071+1.14.14.1|KEGG: 00140+1.14.14.1|KEGG: 00232+1.14.14.1|KEGG: 00380+1.14.14.1|KEGG: 00590+1.14.14.1|KEGG: 00591+1.14.14.1|KEGG: 00627+1.14.14.1|KEGG: 00830+1.14.14.1|KEGG: 00980+1.14.14.1|KEGG: 00982+1.14.14.1|MetaCyc: PWY-5451|MetaCyc: PWY-5665|MetaCyc: PWY-6398|MetaCyc: PWY-6992|MetaCyc: PWY-7466|MetaCyc: PWY-7826 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 SUPERFAMILY SSF52343 900 1058 7.46E-47 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 Pfam PF00258 Flavodoxin 495 627 6.7E-28 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BAMF_0695 b59f2d43cd0063c6b52c367b009bffca 1061 Pfam PF00175 Oxidoreductase NAD-binding domain 913 1022 8.8E-18 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BAMF_0553 eed1007d6e12613f99e991108e871c7d 238 Gene3D G3DSA:1.10.10.630 127 200 2.3E-8 T 12-10-2018 IPR034829 DnaD-like domain superfamily BAMF_0553 eed1007d6e12613f99e991108e871c7d 238 Pfam PF07261 Replication initiation and membrane attachment 132 200 5.3E-11 T 12-10-2018 IPR006343 DnaD domain BAMF_0553 eed1007d6e12613f99e991108e871c7d 238 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 132 189 6.8E-7 T 12-10-2018 IPR006343 DnaD domain BAMF_0553 eed1007d6e12613f99e991108e871c7d 238 SUPERFAMILY SSF158499 132 189 2.22E-9 T 12-10-2018 IPR034829 DnaD-like domain superfamily BAMF_0864 28e0a1d1c00f5c5f96847d2a2a915a42 71 ProDom PD019268 UVIB BACTERIOCIN BHLA PLASMID ANTIBIOTIC HOLIN-LIKE PRECURSOR ANTIMICROBIAL SIGNAL PROPHAGE-DERIVED 1 64 3.0E-24 T 12-10-2018 IPR024405 Prophage protein BhlA/UviB BAMF_0864 28e0a1d1c00f5c5f96847d2a2a915a42 71 Pfam PF10960 BhlA holin family 1 67 3.4E-22 T 12-10-2018 IPR024405 Prophage protein BhlA/UviB BAMF_2838 97f0d09011444a00a59c07ed0968bfdc 400 Gene3D G3DSA:3.30.300.10 13 284 3.1E-183 T 12-10-2018 BAMF_2838 97f0d09011444a00a59c07ed0968bfdc 400 Gene3D G3DSA:3.30.300.10 104 389 3.1E-183 T 12-10-2018 BAMF_2838 97f0d09011444a00a59c07ed0968bfdc 400 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 273 281 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BAMF_2838 97f0d09011444a00a59c07ed0968bfdc 400 PIRSF PIRSF000497 1 398 3.3E-181 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BAMF_2838 97f0d09011444a00a59c07ed0968bfdc 400 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 103 3.5E-44 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BAMF_2838 97f0d09011444a00a59c07ed0968bfdc 400 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 397 60.809 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BAMF_2838 97f0d09011444a00a59c07ed0968bfdc 400 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 129 139 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BAMF_2838 97f0d09011444a00a59c07ed0968bfdc 400 Pfam PF02772 S-adenosylmethionine synthetase, central domain 128 245 8.2E-51 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BAMF_2838 97f0d09011444a00a59c07ed0968bfdc 400 SUPERFAMILY SSF55973 5 111 1.29E-47 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BAMF_2838 97f0d09011444a00a59c07ed0968bfdc 400 SUPERFAMILY SSF55973 125 246 5.89E-54 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BAMF_2838 97f0d09011444a00a59c07ed0968bfdc 400 Gene3D G3DSA:3.30.300.10 7 247 3.1E-183 T 12-10-2018 BAMF_2838 97f0d09011444a00a59c07ed0968bfdc 400 SUPERFAMILY SSF55973 247 395 5.49E-70 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BAMF_2838 97f0d09011444a00a59c07ed0968bfdc 400 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 395 4.8E-191 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BAMF_2838 97f0d09011444a00a59c07ed0968bfdc 400 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 247 386 1.3E-70 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BAMF_2705 326e64148fc5ca579ad4fb97807cd19e 340 Gene3D G3DSA:3.30.360.10 151 315 3.0E-153 T 12-10-2018 BAMF_2705 326e64148fc5ca579ad4fb97807cd19e 340 SMART SM00846 3 152 2.2E-89 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2705 326e64148fc5ca579ad4fb97807cd19e 340 SUPERFAMILY SSF55347 152 314 1.16E-70 T 12-10-2018 BAMF_2705 326e64148fc5ca579ad4fb97807cd19e 340 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2705 326e64148fc5ca579ad4fb97807cd19e 340 Gene3D G3DSA:3.40.50.720 4 328 3.0E-153 T 12-10-2018 BAMF_2705 326e64148fc5ca579ad4fb97807cd19e 340 SUPERFAMILY SSF51735 1 178 1.84E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2705 326e64148fc5ca579ad4fb97807cd19e 340 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 2.6E-39 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2705 326e64148fc5ca579ad4fb97807cd19e 340 PIRSF PIRSF000149 1 335 2.0E-140 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2705 326e64148fc5ca579ad4fb97807cd19e 340 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.5E-67 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2705 326e64148fc5ca579ad4fb97807cd19e 340 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 1.1E-135 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2705 326e64148fc5ca579ad4fb97807cd19e 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 6.6E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2705 326e64148fc5ca579ad4fb97807cd19e 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 6.6E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2705 326e64148fc5ca579ad4fb97807cd19e 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 6.6E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2705 326e64148fc5ca579ad4fb97807cd19e 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 6.6E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2705 326e64148fc5ca579ad4fb97807cd19e 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 6.6E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3129 9c6ef5969ab1e721a3e9f81ac2cae662 153 SUPERFAMILY SSF46785 14 142 3.71E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3129 9c6ef5969ab1e721a3e9f81ac2cae662 153 Pfam PF01047 MarR family 36 92 4.1E-20 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3129 9c6ef5969ab1e721a3e9f81ac2cae662 153 SMART SM00347 28 128 1.1E-30 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3129 9c6ef5969ab1e721a3e9f81ac2cae662 153 Gene3D G3DSA:1.10.287.100 99 153 3.0E-13 T 12-10-2018 BAMF_3129 9c6ef5969ab1e721a3e9f81ac2cae662 153 Gene3D G3DSA:1.10.10.10 35 98 2.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3129 9c6ef5969ab1e721a3e9f81ac2cae662 153 SMART SM00529 53 151 0.0092 T 12-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 BAMF_3129 9c6ef5969ab1e721a3e9f81ac2cae662 153 Gene3D G3DSA:1.20.5.420 1 32 3.9E-12 T 12-10-2018 BAMF_3129 9c6ef5969ab1e721a3e9f81ac2cae662 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 5.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3129 9c6ef5969ab1e721a3e9f81ac2cae662 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 5.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3129 9c6ef5969ab1e721a3e9f81ac2cae662 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 5.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3129 9c6ef5969ab1e721a3e9f81ac2cae662 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 5.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_2545 a3a60eae6fc5d37f67f9dbf38ab932be 363 Gene3D G3DSA:3.30.160.60 328 363 2.9E-7 T 12-10-2018 BAMF_2545 a3a60eae6fc5d37f67f9dbf38ab932be 363 Gene3D G3DSA:1.10.8.1150 49 122 7.0E-25 T 12-10-2018 BAMF_2545 a3a60eae6fc5d37f67f9dbf38ab932be 363 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 21 360 33.794 T 12-10-2018 IPR003770 Endolytic murein transglycosylase BAMF_2545 a3a60eae6fc5d37f67f9dbf38ab932be 363 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 15 360 7.6E-134 T 12-10-2018 IPR003770 Endolytic murein transglycosylase BAMF_2545 a3a60eae6fc5d37f67f9dbf38ab932be 363 Pfam PF02618 YceG-like family 55 354 5.5E-83 T 12-10-2018 IPR003770 Endolytic murein transglycosylase BAMF_0113 472bc36293f30b658afc6f2480a37957 396 PRINTS PR00315 GTP-binding elongation factor signature 79 89 3.1E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_0113 472bc36293f30b658afc6f2480a37957 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.1E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_0113 472bc36293f30b658afc6f2480a37957 396 PRINTS PR00315 GTP-binding elongation factor signature 59 67 3.1E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_0113 472bc36293f30b658afc6f2480a37957 396 PRINTS PR00315 GTP-binding elongation factor signature 132 141 3.1E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_0113 472bc36293f30b658afc6f2480a37957 396 PRINTS PR00315 GTP-binding elongation factor signature 95 106 3.1E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_0113 472bc36293f30b658afc6f2480a37957 396 Gene3D G3DSA:3.40.50.300 1 204 4.3E-70 T 12-10-2018 BAMF_0113 472bc36293f30b658afc6f2480a37957 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 147 4.8E-16 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BAMF_0113 472bc36293f30b658afc6f2480a37957 396 SUPERFAMILY SSF52540 6 220 5.12E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0113 472bc36293f30b658afc6f2480a37957 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.16 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BAMF_0113 472bc36293f30b658afc6f2480a37957 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 202 1.9E-60 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_0113 472bc36293f30b658afc6f2480a37957 396 SUPERFAMILY SSF50447 204 303 1.47E-32 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BAMF_0113 472bc36293f30b658afc6f2480a37957 396 Gene3D G3DSA:2.40.30.10 340 394 9.2E-26 T 12-10-2018 BAMF_0113 472bc36293f30b658afc6f2480a37957 396 Gene3D G3DSA:2.40.30.10 207 336 1.0E-54 T 12-10-2018 BAMF_0113 472bc36293f30b658afc6f2480a37957 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.5E-32 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BAMF_0113 472bc36293f30b658afc6f2480a37957 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 2.1E-233 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BAMF_0113 472bc36293f30b658afc6f2480a37957 396 Pfam PF03144 Elongation factor Tu domain 2 226 295 5.6E-19 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BAMF_0113 472bc36293f30b658afc6f2480a37957 396 SUPERFAMILY SSF50465 304 396 4.32E-35 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BAMF_0113 472bc36293f30b658afc6f2480a37957 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site BAMF_3298 0f7403b545157a40a74452fe70d04cff 162 Pfam PF05870 Phenolic acid decarboxylase (PAD) 1 158 9.7E-82 T 12-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 BAMF_3298 0f7403b545157a40a74452fe70d04cff 162 PIRSF PIRSF011561 1 162 1.8E-96 T 12-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 BAMF_3298 0f7403b545157a40a74452fe70d04cff 162 Gene3D G3DSA:2.40.128.20 1 161 3.2E-81 T 12-10-2018 IPR012674 Calycin BAMF_3298 0f7403b545157a40a74452fe70d04cff 162 ProDom PD022010 DECARBOXYLASE ACID PHENOLIC P-COUMARIC LYASE 4.1.1.- PAD PADC FERULATE PROBABLE 1 161 9.0E-86 T 12-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 BAMF_3298 0f7403b545157a40a74452fe70d04cff 162 SUPERFAMILY SSF50814 2 160 8.21E-75 T 12-10-2018 IPR012674 Calycin BAMF_2852 685b8055134700c598b8d6bbd58880d8 189 Gene3D G3DSA:3.40.1050.10 3 183 3.3E-45 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BAMF_2852 685b8055134700c598b8d6bbd58880d8 189 SUPERFAMILY SSF53056 1 181 1.57E-42 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BAMF_2852 685b8055134700c598b8d6bbd58880d8 189 Pfam PF00484 Carbonic anhydrase 34 178 1.0E-17 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BAMF_2852 685b8055134700c598b8d6bbd58880d8 189 SMART SM00947 26 182 1.1E-35 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BAMF_2469 64730781dd62dc1483e0281867600d2f 244 SUPERFAMILY SSF88713 30 235 1.16E-61 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BAMF_2469 64730781dd62dc1483e0281867600d2f 244 Gene3D G3DSA:3.20.20.370 28 240 1.8E-71 T 12-10-2018 BAMF_2469 64730781dd62dc1483e0281867600d2f 244 Pfam PF01522 Polysaccharide deacetylase 43 161 9.8E-31 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BAMF_3528 6f0d0c916e145e8565e2d083d7591803 180 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 14 180 3.0E-76 T 12-10-2018 IPR006340 Protein of unknown function DUF436 BAMF_3528 6f0d0c916e145e8565e2d083d7591803 180 Hamap MF_00800 UPF0340 protein . 1 180 92.679 T 12-10-2018 IPR006340 Protein of unknown function DUF436 BAMF_3528 6f0d0c916e145e8565e2d083d7591803 180 Pfam PF04260 Protein of unknown function (DUF436) 8 177 2.4E-74 T 12-10-2018 IPR006340 Protein of unknown function DUF436 BAMF_3528 6f0d0c916e145e8565e2d083d7591803 180 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 9 177 4.0E-68 T 12-10-2018 IPR006340 Protein of unknown function DUF436 BAMF_3528 6f0d0c916e145e8565e2d083d7591803 180 SUPERFAMILY SSF110710 1 179 2.38E-76 T 12-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like BAMF_3528 6f0d0c916e145e8565e2d083d7591803 180 PIRSF PIRSF007510 1 180 1.1E-77 T 12-10-2018 IPR006340 Protein of unknown function DUF436 BAMF_3528 6f0d0c916e145e8565e2d083d7591803 180 Gene3D G3DSA:3.40.50.10360 1 180 2.9E-77 T 12-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like BAMF_1930 b6170dd13850b9363e9c2ed6a711f521 299 SUPERFAMILY SSF51569 2 295 1.34E-70 T 12-10-2018 BAMF_1930 b6170dd13850b9363e9c2ed6a711f521 299 Gene3D G3DSA:3.20.20.70 1 299 3.2E-121 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_1930 b6170dd13850b9363e9c2ed6a711f521 299 Pfam PF00682 HMGL-like 7 277 7.7E-50 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BAMF_3163 ac0fcc120f116bbbf80ae3a4ad249baf 239 SMART SM00448 4 115 7.3E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3163 ac0fcc120f116bbbf80ae3a4ad249baf 239 SMART SM00862 152 228 4.4E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_3163 ac0fcc120f116bbbf80ae3a4ad249baf 239 Pfam PF00072 Response regulator receiver domain 6 115 2.9E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3163 ac0fcc120f116bbbf80ae3a4ad249baf 239 SUPERFAMILY SSF52172 3 136 2.56E-38 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_3163 ac0fcc120f116bbbf80ae3a4ad249baf 239 SUPERFAMILY SSF46894 131 230 3.12E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_3163 ac0fcc120f116bbbf80ae3a4ad249baf 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 5.3E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_3163 ac0fcc120f116bbbf80ae3a4ad249baf 239 Gene3D G3DSA:1.10.10.10 131 234 7.0E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3163 ac0fcc120f116bbbf80ae3a4ad249baf 239 Gene3D G3DSA:3.40.50.2300 1 130 7.2E-37 T 12-10-2018 BAMF_3489 950f3feaac5b89f332f7d5376a805229 454 Gene3D G3DSA:1.20.1250.20 258 452 1.0E-21 T 12-10-2018 BAMF_3489 950f3feaac5b89f332f7d5376a805229 454 Pfam PF07690 Major Facilitator Superfamily 16 408 5.8E-57 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_3489 950f3feaac5b89f332f7d5376a805229 454 SUPERFAMILY SSF103473 4 451 5.89E-67 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3489 950f3feaac5b89f332f7d5376a805229 454 Gene3D G3DSA:1.20.1720.10 11 248 2.2E-42 T 12-10-2018 BAMF_2644 e81023f853a3c6cb0eac55311d529748 361 Pfam PF10646 Sporulation and spore germination 76 185 1.6E-21 T 12-10-2018 IPR019606 GerMN domain BAMF_2644 e81023f853a3c6cb0eac55311d529748 361 Pfam PF10646 Sporulation and spore germination 222 336 4.7E-18 T 12-10-2018 IPR019606 GerMN domain BAMF_2644 e81023f853a3c6cb0eac55311d529748 361 SMART SM00909 250 341 5.0E-23 T 12-10-2018 IPR019606 GerMN domain BAMF_2644 e81023f853a3c6cb0eac55311d529748 361 SMART SM00909 99 189 1.1E-26 T 12-10-2018 IPR019606 GerMN domain BAMF_1149 f85032a81c9d1cee06e5ecd93fb730cb 1235 Gene3D G3DSA:3.40.50.300 476 755 3.4E-60 T 12-10-2018 BAMF_1149 f85032a81c9d1cee06e5ecd93fb730cb 1235 Gene3D G3DSA:3.40.50.300 756 961 5.8E-51 T 12-10-2018 BAMF_1149 f85032a81c9d1cee06e5ecd93fb730cb 1235 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 462 5.5E-98 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BAMF_1149 f85032a81c9d1cee06e5ecd93fb730cb 1235 SUPERFAMILY SSF52540 5 889 3.42E-115 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1149 f85032a81c9d1cee06e5ecd93fb730cb 1235 Gene3D G3DSA:3.90.320.10 992 1235 4.8E-86 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal BAMF_1149 f85032a81c9d1cee06e5ecd93fb730cb 1235 Pfam PF13361 UvrD-like helicase C-terminal domain 473 882 1.0E-32 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BAMF_1149 f85032a81c9d1cee06e5ecd93fb730cb 1235 SUPERFAMILY SSF52980 1015 1233 5.09E-39 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BAMF_1149 f85032a81c9d1cee06e5ecd93fb730cb 1235 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 12 1234 0.0 T 12-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 BAMF_1149 f85032a81c9d1cee06e5ecd93fb730cb 1235 Gene3D G3DSA:3.40.50.300 3 187 3.1E-40 T 12-10-2018 BAMF_1149 f85032a81c9d1cee06e5ecd93fb730cb 1235 Gene3D G3DSA:3.40.50.300 262 475 7.6E-33 T 12-10-2018 BAMF_1149 f85032a81c9d1cee06e5ecd93fb730cb 1235 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1055 1226 3.6E-8 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BAMF_1149 f85032a81c9d1cee06e5ecd93fb730cb 1235 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 9 1235 19.975 T 12-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 BAMF_1157 8df23d1ff26b928ef42bdfccae5129c9 77 Pfam PF10803 Spore germination GerPB 1 51 3.6E-28 T 12-10-2018 IPR024255 Spore germination GerPB BAMF_1157 8df23d1ff26b928ef42bdfccae5129c9 77 ProDom PD027559 GERMINATION SPORE GERPB PROBABLE PB SPORULATION PB-RELATED 1 47 1.0E-16 T 12-10-2018 IPR024255 Spore germination GerPB BAMF_1207 603edd7f41c936cf7f7bfe96a08c2ffe 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 2.7E-41 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1207 603edd7f41c936cf7f7bfe96a08c2ffe 412 Gene3D G3DSA:3.40.47.10 1 255 1.6E-110 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1207 603edd7f41c936cf7f7bfe96a08c2ffe 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 409 3.7E-204 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BAMF_1207 603edd7f41c936cf7f7bfe96a08c2ffe 412 Gene3D G3DSA:3.40.47.10 256 400 3.8E-59 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1207 603edd7f41c936cf7f7bfe96a08c2ffe 412 SUPERFAMILY SSF53901 4 251 1.92E-76 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1207 603edd7f41c936cf7f7bfe96a08c2ffe 412 PIRSF PIRSF000447 1 412 1.4E-192 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BAMF_1207 603edd7f41c936cf7f7bfe96a08c2ffe 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 9.8E-62 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_1207 603edd7f41c936cf7f7bfe96a08c2ffe 412 SMART SM00825 Beta-ketoacyl synthase 6 412 6.6E-16 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1207 603edd7f41c936cf7f7bfe96a08c2ffe 412 SUPERFAMILY SSF53901 214 411 5.77E-77 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1207 603edd7f41c936cf7f7bfe96a08c2ffe 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site BAMF_0694 f2138e01addf60ac69a5e42db2ff117c 356 Pfam PF13039 Protein of unknown function (DUF3900) 2 254 1.4E-135 T 12-10-2018 IPR025006 Protein of unknown function DUF3900 BAMF_0694 f2138e01addf60ac69a5e42db2ff117c 356 Pfam PF13037 Domain of unknown function (DUF3898) 261 350 7.8E-42 T 12-10-2018 IPR025012 Domain of unknown function DUF3898 BAMF_2161 944c83fd24a4986f51db6564508b7016 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 7 427 34.441 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BAMF_2161 944c83fd24a4986f51db6564508b7016 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 5 421 1.6E-124 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 BAMF_2161 944c83fd24a4986f51db6564508b7016 428 Gene3D G3DSA:3.65.10.10 9 421 1.3E-154 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BAMF_2161 944c83fd24a4986f51db6564508b7016 428 SUPERFAMILY SSF55205 4 424 3.6E-134 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BAMF_2161 944c83fd24a4986f51db6564508b7016 428 ProSitePatterns PS00104 EPSP synthase signature 1. 85 99 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BAMF_2161 944c83fd24a4986f51db6564508b7016 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 11 426 7.5E-131 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BAMF_2161 944c83fd24a4986f51db6564508b7016 428 PIRSF PIRSF000505 2 428 4.5E-119 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BAMF_2161 944c83fd24a4986f51db6564508b7016 428 Gene3D G3DSA:3.65.10.10 19 227 1.3E-154 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BAMF_2161 944c83fd24a4986f51db6564508b7016 428 ProSitePatterns PS00885 EPSP synthase signature 2. 337 355 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BAMF_2685 f22ffba8a61566a21b6ecd843ceb01a2 499 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 7 304 7.0E-156 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 BAMF_2685 f22ffba8a61566a21b6ecd843ceb01a2 499 Gene3D G3DSA:3.40.50.10940 3 176 7.6E-80 T 12-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 BAMF_2685 f22ffba8a61566a21b6ecd843ceb01a2 499 SUPERFAMILY SSF50443 328 496 4.71E-71 T 12-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal BAMF_2685 f22ffba8a61566a21b6ecd843ceb01a2 499 Pfam PF02610 L-arabinose isomerase 7 358 6.1E-174 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 BAMF_2685 f22ffba8a61566a21b6ecd843ceb01a2 499 Hamap MF_00519 L-arabinose isomerase [araA]. 3 475 63.105 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 BAMF_2685 f22ffba8a61566a21b6ecd843ceb01a2 499 Pfam PF11762 L-arabinose isomerase C-terminal domain 361 474 3.6E-48 T 12-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 BAMF_2685 f22ffba8a61566a21b6ecd843ceb01a2 499 SUPERFAMILY SSF53743 5 326 9.42E-119 T 12-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 BAMF_2685 f22ffba8a61566a21b6ecd843ceb01a2 499 PIRSF PIRSF001478 3 498 6.3E-251 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 BAMF_1383 de710b55559614671f4dc740c6926d5a 343 Pfam PF00005 ABC transporter 26 184 2.3E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1383 de710b55559614671f4dc740c6926d5a 343 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 300 1.7E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BAMF_1383 de710b55559614671f4dc740c6926d5a 343 SUPERFAMILY SSF52540 5 255 5.89E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1383 de710b55559614671f4dc740c6926d5a 343 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 8.1E-25 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BAMF_1383 de710b55559614671f4dc740c6926d5a 343 Gene3D G3DSA:3.40.50.300 3 336 1.2E-103 T 12-10-2018 BAMF_1383 de710b55559614671f4dc740c6926d5a 343 SMART SM00382 34 234 6.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1383 de710b55559614671f4dc740c6926d5a 343 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0479 07118af5c2e000661e1a9b85fbf5e30a 349 Gene3D G3DSA:3.90.180.10 16 344 2.5E-138 T 12-10-2018 BAMF_0479 07118af5c2e000661e1a9b85fbf5e30a 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 146 1.4E-28 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BAMF_0479 07118af5c2e000661e1a9b85fbf5e30a 349 SMART SM00829 8 344 3.1E-8 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BAMF_0479 07118af5c2e000661e1a9b85fbf5e30a 349 SUPERFAMILY SSF50129 14 174 3.04E-54 T 12-10-2018 IPR011032 GroES-like superfamily BAMF_0479 07118af5c2e000661e1a9b85fbf5e30a 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 65 79 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BAMF_0479 07118af5c2e000661e1a9b85fbf5e30a 349 Gene3D G3DSA:3.40.50.720 162 316 2.5E-138 T 12-10-2018 BAMF_0479 07118af5c2e000661e1a9b85fbf5e30a 349 SUPERFAMILY SSF51735 152 314 4.02E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0479 07118af5c2e000661e1a9b85fbf5e30a 349 Pfam PF00107 Zinc-binding dehydrogenase 188 310 1.1E-22 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BAMF_2632 4c0b12d4c8f3b30fa522cad7126236b9 199 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 186 1.9E-96 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 BAMF_2632 4c0b12d4c8f3b30fa522cad7126236b9 199 Pfam PF00694 Aconitase C-terminal domain 1 122 2.7E-33 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 BAMF_2632 4c0b12d4c8f3b30fa522cad7126236b9 199 SUPERFAMILY SSF52016 1 196 1.67E-57 T 12-10-2018 BAMF_2632 4c0b12d4c8f3b30fa522cad7126236b9 199 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 197 42.027 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 BAMF_2632 4c0b12d4c8f3b30fa522cad7126236b9 199 Gene3D G3DSA:3.20.19.10 1 174 1.9E-72 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BAMF_2804 a178adb542ec3a5632b839335ce44894 421 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 411 1.8E-145 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like BAMF_2804 a178adb542ec3a5632b839335ce44894 421 Gene3D G3DSA:2.40.30.10 193 359 5.9E-123 T 12-10-2018 BAMF_2804 a178adb542ec3a5632b839335ce44894 421 SUPERFAMILY SSF160996 194 360 7.72E-46 T 12-10-2018 BAMF_2804 a178adb542ec3a5632b839335ce44894 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.5E-9 T 12-10-2018 BAMF_2804 a178adb542ec3a5632b839335ce44894 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 169 4.5E-9 T 12-10-2018 BAMF_2804 a178adb542ec3a5632b839335ce44894 421 Gene3D G3DSA:3.50.50.60 7 408 5.9E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_2804 a178adb542ec3a5632b839335ce44894 421 Gene3D G3DSA:1.10.8.260 278 342 5.9E-123 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily BAMF_2804 a178adb542ec3a5632b839335ce44894 421 SUPERFAMILY SSF51905 2 414 2.65E-64 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_2804 a178adb542ec3a5632b839335ce44894 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.3E-7 T 12-10-2018 BAMF_2804 a178adb542ec3a5632b839335ce44894 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 2.3E-7 T 12-10-2018 BAMF_2804 a178adb542ec3a5632b839335ce44894 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 367 389 2.3E-7 T 12-10-2018 BAMF_2804 a178adb542ec3a5632b839335ce44894 421 Pfam PF03486 HI0933-like protein 4 412 3.4E-156 T 12-10-2018 BAMF_3367 519c0f9dcc2b3498006d1264b13e4e1d 228 SMART SM00382 27 221 3.0E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3367 519c0f9dcc2b3498006d1264b13e4e1d 228 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3367 519c0f9dcc2b3498006d1264b13e4e1d 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 2.6E-89 T 12-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 BAMF_3367 519c0f9dcc2b3498006d1264b13e4e1d 228 Pfam PF00005 ABC transporter 19 165 8.0E-38 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3367 519c0f9dcc2b3498006d1264b13e4e1d 228 Gene3D G3DSA:3.40.50.300 1 226 3.9E-67 T 12-10-2018 BAMF_3367 519c0f9dcc2b3498006d1264b13e4e1d 228 SUPERFAMILY SSF52540 1 223 7.59E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 SUPERFAMILY SSF56801 1736 2304 1.44E-170 T 12-10-2018 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 ProSitePatterns PS00455 Putative AMP-binding domain signature. 408 419 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1918 1929 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Gene3D G3DSA:3.30.559.30 1499 1754 2.2E-136 T 12-10-2018 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 SUPERFAMILY SSF56801 230 781 4.19E-150 T 12-10-2018 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 SUPERFAMILY SSF47336 2284 2357 6.15E-16 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Gene3D G3DSA:3.30.300.30 2180 2280 2.7E-33 T 12-10-2018 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 290 687 3.9E-134 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1800 2209 1.5E-145 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Gene3D G3DSA:3.40.50.1820 2373 2584 4.6E-57 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 SUPERFAMILY SSF52777 1033 1287 7.56E-38 T 12-10-2018 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Gene3D G3DSA:1.10.1200.10 2281 2362 3.4E-20 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Gene3D G3DSA:1.10.1200.10 757 835 1.2E-22 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Gene3D G3DSA:3.30.559.30 1016 1285 1.2E-70 T 12-10-2018 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Gene3D G3DSA:3.30.300.30 658 756 1.0E-31 T 12-10-2018 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Gene3D G3DSA:3.30.559.30 2 240 9.9E-19 T 12-10-2018 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 SUPERFAMILY SSF52777 851 1025 5.89E-36 T 12-10-2018 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Gene3D G3DSA:3.40.50.12780 1768 2177 2.9E-148 T 12-10-2018 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Pfam PF00550 Phosphopantetheine attachment site 772 830 2.2E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Pfam PF00550 Phosphopantetheine attachment site 2294 2357 9.0E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 SUPERFAMILY SSF52777 1499 1748 1.95E-52 T 12-10-2018 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 ProSitePatterns PS00012 Phosphopantetheine attachment site. 793 808 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Pfam PF00501 AMP-binding enzyme 1779 2185 2.9E-112 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Pfam PF00501 AMP-binding enzyme 269 663 5.1E-95 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1153 1303 1.3E-42 T 12-10-2018 IPR010060 Non-ribosomal peptide synthase BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 SUPERFAMILY SSF52777 3 237 1.78E-16 T 12-10-2018 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Gene3D G3DSA:3.30.559.10 1320 1690 2.2E-136 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 SMART SM00824 Thioesterase 2382 2539 1.9E-4 T 12-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Gene3D G3DSA:3.40.50.12780 254 657 5.3E-130 T 12-10-2018 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 SMART SM00823 Phosphopantetheine attachment site 769 837 0.17 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 SMART SM00823 Phosphopantetheine attachment site 2292 2361 0.011 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2316 2331 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 SUPERFAMILY SSF53474 2367 2585 1.79E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Pfam PF13193 AMP-binding enzyme C-terminal domain 2193 2265 6.0E-9 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Pfam PF13193 AMP-binding enzyme C-terminal domain 671 743 2.0E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Pfam PF00668 Condensation domain 847 1285 3.4E-99 T 12-10-2018 IPR001242 Condensation domain BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Pfam PF00668 Condensation domain 3 246 6.5E-11 T 12-10-2018 IPR001242 Condensation domain BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Pfam PF00668 Condensation domain 1315 1758 1.4E-114 T 12-10-2018 IPR001242 Condensation domain BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Pfam PF00975 Thioesterase domain 2380 2479 5.1E-22 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 SUPERFAMILY SSF52777 1312 1513 1.45E-43 T 12-10-2018 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Gene3D G3DSA:3.30.559.10 836 1015 9.9E-58 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 SUPERFAMILY SSF47336 761 831 5.63E-18 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1911 e50dd7de042bdf8b422e7146cd897a7a 2616 Gene3D G3DSA:1.20.890.40 2477 2529 4.6E-57 T 12-10-2018 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 Gene3D G3DSA:3.50.30.10 474 585 1.4E-35 T 12-10-2018 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 SUPERFAMILY SSF52935 323 473 2.22E-41 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 472 3.2E-195 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 Gene3D G3DSA:3.40.1380.20 340 473 2.7E-44 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 SUPERFAMILY SSF50800 70 167 3.31E-25 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 Pfam PF02887 Pyruvate kinase, alpha/beta domain 358 470 2.6E-34 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 Gene3D G3DSA:2.40.33.10 71 167 3.9E-150 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 Pfam PF00224 Pyruvate kinase, barrel domain 2 343 4.0E-157 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 Gene3D G3DSA:3.20.20.60 4 332 3.9E-150 T 12-10-2018 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 Pfam PF00391 PEP-utilising enzyme, mobile domain 504 575 3.7E-22 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 SUPERFAMILY SSF52009 465 582 3.79E-30 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BAMF_2721 5ee79454fb7a60584dc6ba7d9ba722f6 585 SUPERFAMILY SSF51621 2 343 2.23E-105 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BAMF_1095 b40d463ea41dea1afb0463ce56bf9f8c 172 Gene3D G3DSA:1.10.1760.20 1 165 9.7E-7 T 12-10-2018 BAMF_1095 b40d463ea41dea1afb0463ce56bf9f8c 172 Pfam PF17099 Tryptophan transporter TrpP 2 163 2.1E-63 T 12-10-2018 IPR031360 Tryptophan transporter TrpP BAMF_1095 b40d463ea41dea1afb0463ce56bf9f8c 172 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 165 4.0E-49 T 12-10-2018 BAMF_1651 0ad286dcbe6797528a4b12c6a5739529 217 PIRSF PIRSF001461 1 217 9.2E-101 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BAMF_1651 0ad286dcbe6797528a4b12c6a5739529 217 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BAMF_1651 0ad286dcbe6797528a4b12c6a5739529 217 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 214 3.3E-95 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BAMF_1651 0ad286dcbe6797528a4b12c6a5739529 217 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 201 9.1E-93 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BAMF_1651 0ad286dcbe6797528a4b12c6a5739529 217 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BAMF_1651 0ad286dcbe6797528a4b12c6a5739529 217 SUPERFAMILY SSF51366 1 214 2.62E-77 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BAMF_1651 0ad286dcbe6797528a4b12c6a5739529 217 Gene3D G3DSA:3.20.20.70 1 216 2.0E-91 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_2156 37a0781c141b98e17ad80da7d52158b0 224 Pfam PF00033 Cytochrome b/b6/petB 40 219 2.1E-48 T 12-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BAMF_2156 37a0781c141b98e17ad80da7d52158b0 224 PIRSF PIRSF000032 2 224 2.7E-103 T 12-10-2018 BAMF_2156 37a0781c141b98e17ad80da7d52158b0 224 Gene3D G3DSA:1.20.810.10 1 224 4.7E-88 T 12-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 BAMF_2156 37a0781c141b98e17ad80da7d52158b0 224 SUPERFAMILY SSF81342 6 224 1.91E-60 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BAMF_3672 1f70230783f4faa812e854ecc471fb53 251 Gene3D G3DSA:1.10.490.50 158 248 3.6E-16 T 12-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain BAMF_3672 1f70230783f4faa812e854ecc471fb53 251 Pfam PF07739 TipAS antibiotic-recognition domain 131 244 5.2E-32 T 12-10-2018 IPR012925 TipAS antibiotic-recognition domain BAMF_3672 1f70230783f4faa812e854ecc471fb53 251 SMART SM00422 4 73 4.1E-28 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_3672 1f70230783f4faa812e854ecc471fb53 251 SUPERFAMILY SSF89082 162 246 7.85E-24 T 12-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain BAMF_3672 1f70230783f4faa812e854ecc471fb53 251 Gene3D G3DSA:1.10.1660.10 2 140 4.1E-51 T 12-10-2018 BAMF_3672 1f70230783f4faa812e854ecc471fb53 251 SUPERFAMILY SSF46955 4 114 4.03E-30 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BAMF_3672 1f70230783f4faa812e854ecc471fb53 251 Pfam PF13411 MerR HTH family regulatory protein 4 72 4.4E-19 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_2767 ed640290e1b5064b9a38385825b11beb 421 SUPERFAMILY SSF52374 2 325 3.97E-106 T 12-10-2018 BAMF_2767 ed640290e1b5064b9a38385825b11beb 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 6.5E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BAMF_2767 ed640290e1b5064b9a38385825b11beb 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 6.5E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BAMF_2767 ed640290e1b5064b9a38385825b11beb 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 6.5E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BAMF_2767 ed640290e1b5064b9a38385825b11beb 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 218 230 6.5E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BAMF_2767 ed640290e1b5064b9a38385825b11beb 421 Gene3D G3DSA:3.40.50.620 1 224 1.7E-90 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_2767 ed640290e1b5064b9a38385825b11beb 421 Gene3D G3DSA:1.10.240.10 225 327 1.8E-41 T 12-10-2018 BAMF_2767 ed640290e1b5064b9a38385825b11beb 421 SUPERFAMILY SSF55174 323 420 2.22E-25 T 12-10-2018 BAMF_2767 ed640290e1b5064b9a38385825b11beb 421 Pfam PF00579 tRNA synthetases class I (W and Y) 28 325 2.8E-92 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2767 ed640290e1b5064b9a38385825b11beb 421 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 1 420 3.6E-151 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BAMF_2767 ed640290e1b5064b9a38385825b11beb 421 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2767 ed640290e1b5064b9a38385825b11beb 421 Gene3D G3DSA:3.10.290.10 328 421 1.3E-34 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BAMF_2767 ed640290e1b5064b9a38385825b11beb 421 Pfam PF01479 S4 domain 357 402 3.6E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_2767 ed640290e1b5064b9a38385825b11beb 421 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 421 46.584 T 12-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 BAMF_2767 ed640290e1b5064b9a38385825b11beb 421 SMART SM00363 356 417 2.4E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0617 146cc3b2e536f34df5cba32a9fa0f52c 346 SUPERFAMILY SSF51735 143 309 2.96E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0617 146cc3b2e536f34df5cba32a9fa0f52c 346 Gene3D G3DSA:3.40.50.720 156 291 4.4E-98 T 12-10-2018 BAMF_0617 146cc3b2e536f34df5cba32a9fa0f52c 346 Pfam PF00107 Zinc-binding dehydrogenase 179 304 1.7E-25 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BAMF_0617 146cc3b2e536f34df5cba32a9fa0f52c 346 Gene3D G3DSA:3.90.180.10 9 325 4.4E-98 T 12-10-2018 BAMF_0617 146cc3b2e536f34df5cba32a9fa0f52c 346 SUPERFAMILY SSF50129 1 178 3.04E-48 T 12-10-2018 IPR011032 GroES-like superfamily BAMF_0617 146cc3b2e536f34df5cba32a9fa0f52c 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BAMF_0617 146cc3b2e536f34df5cba32a9fa0f52c 346 SMART SM00829 8 343 5.3E-6 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BAMF_0617 146cc3b2e536f34df5cba32a9fa0f52c 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 138 1.1E-26 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BAMF_0554 8c77460738867cc7c68c20c03e6d8cb0 323 Gene3D G3DSA:3.40.50.300 109 306 3.4E-37 T 12-10-2018 BAMF_0554 8c77460738867cc7c68c20c03e6d8cb0 323 Pfam PF01695 IstB-like ATP binding protein 165 235 1.6E-6 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 BAMF_0554 8c77460738867cc7c68c20c03e6d8cb0 323 SMART SM00382 165 305 1.9E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0554 8c77460738867cc7c68c20c03e6d8cb0 323 SUPERFAMILY SSF52540 132 297 1.51E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1565 3292d208b3dd6bca909151c50f0a2226 207 Pfam PF00510 Cytochrome c oxidase subunit III 28 204 6.3E-19 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1565 3292d208b3dd6bca909151c50f0a2226 207 Gene3D G3DSA:1.20.120.80 21 206 2.3E-51 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1565 3292d208b3dd6bca909151c50f0a2226 207 SUPERFAMILY SSF81452 19 204 4.71E-55 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 Gene3D G3DSA:3.30.565.10 881 1021 3.2E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 SUPERFAMILY SSF55874 485 653 9.43E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 Pfam PF07695 7TM diverse intracellular signalling 206 404 3.0E-7 T 12-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 SUPERFAMILY SSF47384 418 495 2.16E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 SMART SM00448 688 801 5.4E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 Pfam PF00512 His Kinase A (phospho-acceptor) domain 429 496 1.6E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 SUPERFAMILY SSF55874 878 1009 1.1E-13 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 SUPERFAMILY SSF52172 684 813 2.42E-34 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 Pfam PF00072 Response regulator receiver domain 690 801 2.6E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 Gene3D G3DSA:3.30.565.10 498 653 7.2E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 SMART SM00388 428 496 2.9E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 Pfam PF06580 Histidine kinase 817 897 2.8E-21 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 Gene3D G3DSA:3.40.50.12740 687 863 3.3E-35 T 12-10-2018 BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 SMART SM00387 907 1014 5.6E-4 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 SMART SM00387 542 651 1.2E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 915 1008 4.7E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 543 650 6.8E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 SUPERFAMILY SSF49785 50 189 9.78E-7 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 Gene3D G3DSA:1.10.287.130 413 497 1.0E-19 T 12-10-2018 BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 629 2.9E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 607 2.9E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 593 2.9E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0722 05f60ce81160272c638fe1e746922a09 1028 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 648 2.9E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1135 58e14acc9ca400c4975b553ef5341c95 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 102 23.043 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 BAMF_1135 58e14acc9ca400c4975b553ef5341c95 105 Gene3D G3DSA:3.30.110.70 1 104 3.2E-29 T 12-10-2018 BAMF_1135 58e14acc9ca400c4975b553ef5341c95 105 SUPERFAMILY SSF117782 1 103 1.09E-32 T 12-10-2018 IPR035439 UPF0145 domain superfamily BAMF_1135 58e14acc9ca400c4975b553ef5341c95 105 Pfam PF01906 Putative heavy-metal-binding 1 101 2.0E-33 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 BAMF_2626 1313fe93f9582da83a4ae86d2cf2f6b9 195 Pfam PF01926 50S ribosome-binding GTPase 25 143 4.5E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_2626 1313fe93f9582da83a4ae86d2cf2f6b9 195 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 189 4.5E-71 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 BAMF_2626 1313fe93f9582da83a4ae86d2cf2f6b9 195 Gene3D G3DSA:3.40.50.300 1 195 1.4E-56 T 12-10-2018 BAMF_2626 1313fe93f9582da83a4ae86d2cf2f6b9 195 SUPERFAMILY SSF52540 16 193 2.52E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2626 1313fe93f9582da83a4ae86d2cf2f6b9 195 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 29.275 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 BAMF_0018 59e1b33c5017ea3e393c107ebd9d8259 183 SUPERFAMILY SSF52499 3 180 2.22E-48 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BAMF_0018 59e1b33c5017ea3e393c107ebd9d8259 183 Pfam PF00857 Isochorismatase family 7 176 5.0E-34 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 BAMF_0018 59e1b33c5017ea3e393c107ebd9d8259 183 Gene3D G3DSA:3.40.50.850 1 182 6.7E-47 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BAMF_1668 91d58badbc8fad6ca92cbaf4ab6332d5 110 SUPERFAMILY SSF88659 3 103 2.8E-33 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_1668 91d58badbc8fad6ca92cbaf4ab6332d5 110 Hamap MF_00245 UPF0122 protein . 3 103 22.288 T 12-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like BAMF_1668 91d58badbc8fad6ca92cbaf4ab6332d5 110 Gene3D G3DSA:1.10.10.10 1 110 1.0E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1668 91d58badbc8fad6ca92cbaf4ab6332d5 110 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 3 101 5.0E-42 T 12-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like BAMF_0252 829f440695cd49f320649acbd6bd4a61 167 Gene3D G3DSA:3.30.1380.10 31 164 3.2E-41 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BAMF_0252 829f440695cd49f320649acbd6bd4a61 167 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 95 164 4.2E-19 T 12-10-2018 IPR039561 Peptidase M15C GO:0008233 BAMF_0252 829f440695cd49f320649acbd6bd4a61 167 SUPERFAMILY SSF55166 43 165 5.49E-31 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BAMF_1107 2eaa0e38031ca1953a3ec9c9a100203d 477 Pfam PF01593 Flavin containing amine oxidoreductase 15 461 2.0E-70 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 BAMF_1107 2eaa0e38031ca1953a3ec9c9a100203d 477 SUPERFAMILY SSF54373 308 415 1.01E-33 T 12-10-2018 BAMF_1107 2eaa0e38031ca1953a3ec9c9a100203d 477 Gene3D G3DSA:1.10.3110.10 110 203 4.6E-154 T 12-10-2018 BAMF_1107 2eaa0e38031ca1953a3ec9c9a100203d 477 Gene3D G3DSA:3.50.50.60 9 456 4.6E-154 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1107 2eaa0e38031ca1953a3ec9c9a100203d 477 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 5 469 6.0E-175 T 12-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BAMF_1107 2eaa0e38031ca1953a3ec9c9a100203d 477 Gene3D G3DSA:3.90.660.20 44 414 4.6E-154 T 12-10-2018 BAMF_1107 2eaa0e38031ca1953a3ec9c9a100203d 477 SUPERFAMILY SSF51905 6 461 2.07E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 Hamap MF_01228 Methionine--tRNA ligase [metG]. 3 522 52.165 T 12-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 SUPERFAMILY SSF47323 364 576 8.18E-49 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 Pfam PF08264 Anticodon-binding domain of tRNA 397 547 1.3E-10 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 524 1.2E-192 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 533 663 3.3E-46 T 12-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 Pfam PF01588 Putative tRNA binding domain 569 660 1.3E-26 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 Gene3D G3DSA:2.40.50.140 554 663 2.0E-33 T 12-10-2018 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 6.1E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 6.1E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 PRINTS PR01041 Methionyl-tRNA synthetase signature 362 373 6.1E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 PRINTS PR01041 Methionyl-tRNA synthetase signature 270 285 6.1E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 6.1E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 PRINTS PR01041 Methionyl-tRNA synthetase signature 237 248 6.1E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 Gene3D G3DSA:2.170.220.10 119 239 1.1E-154 T 12-10-2018 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 Gene3D G3DSA:1.10.730.10 352 521 6.1E-54 T 12-10-2018 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 26 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 SUPERFAMILY SSF52374 5 361 6.97E-118 T 12-10-2018 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 Pfam PF09334 tRNA synthetases class I (M) 8 374 9.2E-122 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 SUPERFAMILY SSF50249 563 662 9.3E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_0038 fd694bb2992cf6d655656a75c5f17109 663 Gene3D G3DSA:3.40.50.620 8 345 1.1E-154 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_0663 f1a745ae8711c69b06238055b17fdac8 485 Pfam PF01425 Amidase 24 465 3.1E-166 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BAMF_0663 f1a745ae8711c69b06238055b17fdac8 485 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 11 477 2.6E-213 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BAMF_0663 f1a745ae8711c69b06238055b17fdac8 485 Gene3D G3DSA:3.90.1300.10 2 485 3.4E-204 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BAMF_0663 f1a745ae8711c69b06238055b17fdac8 485 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 477 96.856 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BAMF_0663 f1a745ae8711c69b06238055b17fdac8 485 ProSitePatterns PS00571 Amidases signature. 152 183 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 BAMF_0663 f1a745ae8711c69b06238055b17fdac8 485 SUPERFAMILY SSF75304 1 483 1.83E-170 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BAMF_1395 98b334be3f8be758081539cc7199d3e8 300 Gene3D G3DSA:3.30.70.260 18 102 2.4E-27 T 12-10-2018 BAMF_1395 98b334be3f8be758081539cc7199d3e8 300 Pfam PF00551 Formyl transferase 104 281 2.2E-43 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BAMF_1395 98b334be3f8be758081539cc7199d3e8 300 Pfam PF01842 ACT domain 22 83 8.7E-11 T 12-10-2018 IPR002912 ACT domain BAMF_1395 98b334be3f8be758081539cc7199d3e8 300 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 17 299 47.383 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BAMF_1395 98b334be3f8be758081539cc7199d3e8 300 Gene3D G3DSA:3.40.50.170 104 300 1.6E-71 T 12-10-2018 BAMF_1395 98b334be3f8be758081539cc7199d3e8 300 SUPERFAMILY SSF55021 21 101 3.52E-18 T 12-10-2018 BAMF_1395 98b334be3f8be758081539cc7199d3e8 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 127 154 7.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BAMF_1395 98b334be3f8be758081539cc7199d3e8 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 22 48 7.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BAMF_1395 98b334be3f8be758081539cc7199d3e8 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 55 67 7.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BAMF_1395 98b334be3f8be758081539cc7199d3e8 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 127 7.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BAMF_1395 98b334be3f8be758081539cc7199d3e8 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 273 7.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BAMF_1395 98b334be3f8be758081539cc7199d3e8 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 273 298 7.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BAMF_1395 98b334be3f8be758081539cc7199d3e8 300 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 21 299 7.6E-136 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BAMF_1395 98b334be3f8be758081539cc7199d3e8 300 PIRSF PIRSF036480 17 300 3.8E-112 T 12-10-2018 BAMF_1395 98b334be3f8be758081539cc7199d3e8 300 SUPERFAMILY SSF53328 104 300 6.02E-61 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BAMF_0231 9a2ab241ece6d6ecc80a5c28adab5c98 176 Gene3D G3DSA:3.40.109.10 1 176 3.5E-52 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BAMF_0231 9a2ab241ece6d6ecc80a5c28adab5c98 176 Pfam PF00881 Nitroreductase family 3 154 5.6E-21 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BAMF_0231 9a2ab241ece6d6ecc80a5c28adab5c98 176 SUPERFAMILY SSF55469 1 175 6.15E-40 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BAMF_2442 cce1115afe9cfa460098f1faeecbbfce 311 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 305 3.9E-119 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BAMF_2442 cce1115afe9cfa460098f1faeecbbfce 311 Gene3D G3DSA:3.40.50.150 116 311 3.6E-64 T 12-10-2018 BAMF_2442 cce1115afe9cfa460098f1faeecbbfce 311 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 311 7.9E-110 T 12-10-2018 BAMF_2442 cce1115afe9cfa460098f1faeecbbfce 311 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 311 36.531 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BAMF_2442 cce1115afe9cfa460098f1faeecbbfce 311 PIRSF PIRSF000401 1 311 3.3E-110 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BAMF_2442 cce1115afe9cfa460098f1faeecbbfce 311 SUPERFAMILY SSF53335 94 310 5.77E-49 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 SMART SM00316 626 708 2.4E-20 T 12-10-2018 IPR022967 RNA-binding domain, S1 BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 Pfam PF00773 RNB domain 248 576 4.3E-118 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 SUPERFAMILY SSF50249 626 705 7.55E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 SMART SM00357 138 202 7.3E-11 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 SMART SM00357 73 133 3.5E-14 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 SUPERFAMILY SSF50249 54 135 6.0E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 Pfam PF00575 S1 RNA binding domain 625 707 2.3E-17 T 12-10-2018 IPR003029 S1 domain GO:0003676 BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 SMART SM00955 248 578 9.7E-186 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 Hamap MF_01895 Ribonuclease R [rnr]. 25 708 62.63 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 Gene3D G3DSA:2.40.50.140 629 777 5.4E-25 T 12-10-2018 BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 55 708 8.2E-279 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 SUPERFAMILY SSF50249 208 625 4.23E-150 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 ProSitePatterns PS01175 Ribonuclease II family signature. 545 569 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 TIGRFAM TIGR02063 RNase_R: ribonuclease R 9 708 3.1E-291 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 Gene3D G3DSA:2.40.50.140 59 134 2.9E-18 T 12-10-2018 BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 Gene3D G3DSA:2.40.50.140 135 203 2.1E-10 T 12-10-2018 BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 Pfam PF08206 Ribonuclease B OB domain 74 132 2.2E-20 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 Pfam PF08206 Ribonuclease B OB domain 148 201 2.9E-9 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain BAMF_3216 d46fb75ce9385d0422b946e0eb22cc16 777 SUPERFAMILY SSF50249 126 225 3.73E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 SUPERFAMILY SSF56719 400 631 6.8E-93 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 10 640 0.0 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 SUPERFAMILY SSF54211 227 397 4.55E-64 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 Gene3D G3DSA:3.30.230.10 226 404 2.1E-75 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 SMART SM00387 35 179 1.5E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 178 1.2E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 SMART SM00433 39 633 0.0 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR00418 DNA topoisomerase II family signature 530 542 1.6E-72 T 12-10-2018 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR00418 DNA topoisomerase II family signature 426 440 1.6E-72 T 12-10-2018 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR00418 DNA topoisomerase II family signature 572 588 1.6E-72 T 12-10-2018 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR00418 DNA topoisomerase II family signature 492 508 1.6E-72 T 12-10-2018 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR00418 DNA topoisomerase II family signature 274 287 1.6E-72 T 12-10-2018 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR00418 DNA topoisomerase II family signature 39 54 1.6E-72 T 12-10-2018 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR00418 DNA topoisomerase II family signature 117 131 1.6E-72 T 12-10-2018 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR00418 DNA topoisomerase II family signature 74 87 1.6E-72 T 12-10-2018 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR00418 DNA topoisomerase II family signature 510 527 1.6E-72 T 12-10-2018 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 Pfam PF00204 DNA gyrase B 227 396 3.5E-65 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 ProSitePatterns PS00177 DNA topoisomerase II signature. 428 436 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 Gene3D G3DSA:3.40.50.670 405 640 3.9E-112 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 SUPERFAMILY SSF55874 10 222 1.13E-73 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 Gene3D G3DSA:3.30.565.10 6 225 1.3E-94 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR01159 DNA gyrase subunit B signature 609 625 1.4E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR01159 DNA gyrase subunit B signature 318 334 1.4E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR01159 DNA gyrase subunit B signature 593 605 1.4E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR01159 DNA gyrase subunit B signature 10 20 1.4E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR01159 DNA gyrase subunit B signature 185 200 1.4E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR01159 DNA gyrase subunit B signature 366 380 1.4E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR01159 DNA gyrase subunit B signature 200 213 1.4E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR01159 DNA gyrase subunit B signature 476 485 1.4E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR01159 DNA gyrase subunit B signature 380 400 1.4E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 PRINTS PR01159 DNA gyrase subunit B signature 226 248 1.4E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 7 640 98.67 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 Pfam PF01751 Toprim domain 425 536 5.4E-19 T 12-10-2018 IPR006171 TOPRIM domain BAMF_0006 0b14088cf86cba3e2c5911fde2262ae9 640 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 570 629 4.1E-30 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_1737 5bc3926a33462d081396a478cb849ee7 115 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 2 110 1.1E-43 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BAMF_1737 5bc3926a33462d081396a478cb849ee7 115 Pfam PF02033 Ribosome-binding factor A 2 105 8.0E-36 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BAMF_1737 5bc3926a33462d081396a478cb849ee7 115 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 5 92 3.0E-30 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BAMF_1737 5bc3926a33462d081396a478cb849ee7 115 Gene3D G3DSA:3.30.300.20 1 114 4.2E-41 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BAMF_1737 5bc3926a33462d081396a478cb849ee7 115 ProSitePatterns PS01319 Ribosome-binding factor A signature. 71 92 - T 12-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 BAMF_1737 5bc3926a33462d081396a478cb849ee7 115 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 1 105 29.715 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BAMF_1737 5bc3926a33462d081396a478cb849ee7 115 SUPERFAMILY SSF89919 1 108 1.24E-36 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily BAMF_1300 259377fc35bb48e435564515507affe2 141 Pfam PF01047 MarR family 27 85 1.4E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1300 259377fc35bb48e435564515507affe2 141 Gene3D G3DSA:1.10.10.10 4 137 2.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1300 259377fc35bb48e435564515507affe2 141 SMART SM00347 20 121 2.4E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1300 259377fc35bb48e435564515507affe2 141 SUPERFAMILY SSF46785 20 138 5.38E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1628 338daea726571fb2ae76fe588b19a582 233 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 24 233 1.5E-99 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BAMF_1628 338daea726571fb2ae76fe588b19a582 233 PIRSF PIRSF000857 6 233 1.2E-87 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BAMF_1628 338daea726571fb2ae76fe588b19a582 233 Gene3D G3DSA:3.40.50.620 15 233 4.6E-73 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_1628 338daea726571fb2ae76fe588b19a582 233 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 43 231 9.3E-80 T 12-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 BAMF_1628 338daea726571fb2ae76fe588b19a582 233 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 38 209 9.3E-54 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 BAMF_1628 338daea726571fb2ae76fe588b19a582 233 SUPERFAMILY SSF52402 19 197 4.06E-52 T 12-10-2018 BAMF_1628 338daea726571fb2ae76fe588b19a582 233 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 1 233 42.403 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BAMF_3599 f0da80f9fc51c150f0c05c45b0da6165 254 Gene3D G3DSA:3.30.70.1030 7 143 2.1E-52 T 12-10-2018 BAMF_3599 f0da80f9fc51c150f0c05c45b0da6165 254 Gene3D G3DSA:3.30.70.1100 144 254 9.3E-48 T 12-10-2018 BAMF_3599 f0da80f9fc51c150f0c05c45b0da6165 254 Hamap MF_01442 Putative heme-dependent peroxidase . 7 254 56.994 T 12-10-2018 IPR031332 Putative heme-dependent peroxidase, UPF0447 family BAMF_3599 f0da80f9fc51c150f0c05c45b0da6165 254 Pfam PF06778 Chlorite dismutase 41 243 6.8E-77 T 12-10-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase BAMF_3599 f0da80f9fc51c150f0c05c45b0da6165 254 SUPERFAMILY SSF54909 13 253 6.43E-95 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BAMF_2311 9ea9f2b342f317b9641c486443d9bc32 365 PIRSF PIRSF001369 1 365 4.7E-129 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type BAMF_2311 9ea9f2b342f317b9641c486443d9bc32 365 SUPERFAMILY SSF48256 3 363 3.01E-113 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 BAMF_2311 9ea9f2b342f317b9641c486443d9bc32 365 Gene3D G3DSA:1.10.580.10 30 353 7.9E-103 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BAMF_2311 9ea9f2b342f317b9641c486443d9bc32 365 ProSitePatterns PS00480 Citrate synthase signature. 256 269 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BAMF_2311 9ea9f2b342f317b9641c486443d9bc32 365 Pfam PF00285 Citrate synthase, C-terminal domain 7 357 2.5E-105 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_2311 9ea9f2b342f317b9641c486443d9bc32 365 Gene3D G3DSA:1.10.230.10 222 321 7.9E-103 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain BAMF_2311 9ea9f2b342f317b9641c486443d9bc32 365 PRINTS PR00143 Citrate synthase signature 249 269 1.4E-33 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_2311 9ea9f2b342f317b9641c486443d9bc32 365 PRINTS PR00143 Citrate synthase signature 307 323 1.4E-33 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_2311 9ea9f2b342f317b9641c486443d9bc32 365 PRINTS PR00143 Citrate synthase signature 174 189 1.4E-33 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_2311 9ea9f2b342f317b9641c486443d9bc32 365 PRINTS PR00143 Citrate synthase signature 327 341 1.4E-33 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_2311 9ea9f2b342f317b9641c486443d9bc32 365 PRINTS PR00143 Citrate synthase signature 125 138 1.4E-33 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_2311 9ea9f2b342f317b9641c486443d9bc32 365 PRINTS PR00143 Citrate synthase signature 196 224 1.4E-33 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_3368 0be85df2723967ad88c0b477b237cbba 113 Gene3D G3DSA:1.10.760.10 44 113 2.0E-28 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BAMF_3368 0be85df2723967ad88c0b477b237cbba 113 PIRSF PIRSF000025 1 113 3.2E-38 T 12-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 BAMF_3368 0be85df2723967ad88c0b477b237cbba 113 SUPERFAMILY SSF46626 1 111 1.27E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BAMF_3368 0be85df2723967ad88c0b477b237cbba 113 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 41 109 3.9E-15 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1843 a5a1e81a1cb3ffb67f9613559f1fe8b5 286 Gene3D G3DSA:3.30.240.20 170 229 2.8E-14 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_1843 a5a1e81a1cb3ffb67f9613559f1fe8b5 286 Gene3D G3DSA:3.30.240.20 81 154 3.9E-25 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_1843 a5a1e81a1cb3ffb67f9613559f1fe8b5 286 Pfam PF04239 Protein of unknown function (DUF421) 89 204 4.3E-34 T 12-10-2018 IPR007353 Protein of unknown function DUF421 BAMF_1843 a5a1e81a1cb3ffb67f9613559f1fe8b5 286 Pfam PF07870 Protein of unknown function (DUF1657) 239 282 8.6E-15 T 12-10-2018 IPR012452 Protein of unknown function DUF1657 BAMF_3822 a5a1e81a1cb3ffb67f9613559f1fe8b5 286 Gene3D G3DSA:3.30.240.20 170 229 2.8E-14 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_3822 a5a1e81a1cb3ffb67f9613559f1fe8b5 286 Gene3D G3DSA:3.30.240.20 81 154 3.9E-25 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_3822 a5a1e81a1cb3ffb67f9613559f1fe8b5 286 Pfam PF04239 Protein of unknown function (DUF421) 89 204 4.3E-34 T 12-10-2018 IPR007353 Protein of unknown function DUF421 BAMF_3822 a5a1e81a1cb3ffb67f9613559f1fe8b5 286 Pfam PF07870 Protein of unknown function (DUF1657) 239 282 8.6E-15 T 12-10-2018 IPR012452 Protein of unknown function DUF1657 BAMF_1961 a5a1e81a1cb3ffb67f9613559f1fe8b5 286 Gene3D G3DSA:3.30.240.20 170 229 2.8E-14 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_1961 a5a1e81a1cb3ffb67f9613559f1fe8b5 286 Gene3D G3DSA:3.30.240.20 81 154 3.9E-25 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_1961 a5a1e81a1cb3ffb67f9613559f1fe8b5 286 Pfam PF04239 Protein of unknown function (DUF421) 89 204 4.3E-34 T 12-10-2018 IPR007353 Protein of unknown function DUF421 BAMF_1961 a5a1e81a1cb3ffb67f9613559f1fe8b5 286 Pfam PF07870 Protein of unknown function (DUF1657) 239 282 8.6E-15 T 12-10-2018 IPR012452 Protein of unknown function DUF1657 BAMF_0526 16102f7fff3d6ea6347e064266ef7c3b 472 ProSitePatterns PS00217 Sugar transport proteins signature 2. 112 137 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_0526 16102f7fff3d6ea6347e064266ef7c3b 472 Gene3D G3DSA:1.20.1250.20 6 458 1.4E-131 T 12-10-2018 BAMF_0526 16102f7fff3d6ea6347e064266ef7c3b 472 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 3 450 7.9E-122 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_0526 16102f7fff3d6ea6347e064266ef7c3b 472 PRINTS PR00171 Sugar transporter signature 107 126 7.6E-24 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_0526 16102f7fff3d6ea6347e064266ef7c3b 472 PRINTS PR00171 Sugar transporter signature 356 377 7.6E-24 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_0526 16102f7fff3d6ea6347e064266ef7c3b 472 PRINTS PR00171 Sugar transporter signature 22 32 7.6E-24 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_0526 16102f7fff3d6ea6347e064266ef7c3b 472 PRINTS PR00171 Sugar transporter signature 379 391 7.6E-24 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_0526 16102f7fff3d6ea6347e064266ef7c3b 472 PRINTS PR00171 Sugar transporter signature 267 277 7.6E-24 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_0526 16102f7fff3d6ea6347e064266ef7c3b 472 SUPERFAMILY SSF103473 8 452 1.31E-79 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0526 16102f7fff3d6ea6347e064266ef7c3b 472 Pfam PF00083 Sugar (and other) transporter 15 455 1.1E-120 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BAMF_0982 17f3a3fceb81182272d7bbe486cea601 376 Pfam PF00296 Luciferase-like monooxygenase 1 323 2.5E-90 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BAMF_0982 17f3a3fceb81182272d7bbe486cea601 376 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 347 1.2E-189 T 12-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 BAMF_0982 17f3a3fceb81182272d7bbe486cea601 376 SUPERFAMILY SSF51679 1 347 1.7E-99 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_0982 17f3a3fceb81182272d7bbe486cea601 376 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 1 374 79.253 T 12-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 BAMF_0982 17f3a3fceb81182272d7bbe486cea601 376 Gene3D G3DSA:3.20.20.30 1 359 2.6E-146 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_1437 dc32aed36e93110e4e2e98fc2977d127 353 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 347 39.032 T 12-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BAMF_1437 dc32aed36e93110e4e2e98fc2977d127 353 Pfam PF01008 Initiation factor 2 subunit family 49 336 2.3E-90 T 12-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 BAMF_1437 dc32aed36e93110e4e2e98fc2977d127 353 Gene3D G3DSA:3.40.50.10470 149 352 1.2E-71 T 12-10-2018 BAMF_1437 dc32aed36e93110e4e2e98fc2977d127 353 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 9 336 8.9E-140 T 12-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BAMF_1437 dc32aed36e93110e4e2e98fc2977d127 353 Gene3D G3DSA:1.20.120.420 1 148 3.6E-51 T 12-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BAMF_1437 dc32aed36e93110e4e2e98fc2977d127 353 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 36 336 5.8E-132 T 12-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BAMF_1437 dc32aed36e93110e4e2e98fc2977d127 353 SUPERFAMILY SSF100950 6 343 1.26E-114 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BAMF_3229 cb513a4f69dbe8df623afb0f3cf7b9bc 305 Gene3D G3DSA:3.40.190.120 139 243 3.6E-91 T 12-10-2018 BAMF_3229 cb513a4f69dbe8df623afb0f3cf7b9bc 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 300 3.8E-55 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 BAMF_3229 cb513a4f69dbe8df623afb0f3cf7b9bc 305 SUPERFAMILY SSF53850 34 303 2.76E-64 T 12-10-2018 BAMF_3229 cb513a4f69dbe8df623afb0f3cf7b9bc 305 Gene3D G3DSA:3.40.190.10 37 299 3.6E-91 T 12-10-2018 BAMF_2141 5db7055dfe24b7401eb391331923b50f 127 Gene3D G3DSA:2.40.40.20 1 125 2.8E-55 T 12-10-2018 BAMF_2141 5db7055dfe24b7401eb391331923b50f 127 SUPERFAMILY SSF50692 1 117 4.47E-51 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BAMF_2141 5db7055dfe24b7401eb391331923b50f 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 75.205 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BAMF_2141 5db7055dfe24b7401eb391331923b50f 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 2.0E-67 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BAMF_2141 5db7055dfe24b7401eb391331923b50f 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 98 6.0E-47 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BAMF_2141 5db7055dfe24b7401eb391331923b50f 127 Pfam PF02261 Aspartate decarboxylase 1 114 2.1E-54 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BAMF_2141 5db7055dfe24b7401eb391331923b50f 127 PIRSF PIRSF006246 1 126 1.2E-55 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 PIRSF PIRSF000238 2 509 7.8E-261 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 209 483 3.0E-45 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 2 509 2.2E-245 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 242 257 4.2E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 345 369 4.2E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 435 456 4.2E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 330 342 4.2E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 469 487 4.2E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 210 232 4.2E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 308 316 4.2E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 262 272 4.2E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 397 413 4.2E-66 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 Gene3D G3DSA:3.40.30.80 2 199 1.8E-63 T 12-10-2018 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 SUPERFAMILY SSF51905 202 505 1.75E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 SUPERFAMILY SSF52833 103 196 1.85E-24 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 Pfam PF13192 Thioredoxin domain 125 194 4.1E-9 T 12-10-2018 IPR012336 Thioredoxin-like fold BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 Gene3D G3DSA:3.50.50.60 319 441 1.9E-108 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 Gene3D G3DSA:3.50.50.60 209 499 1.9E-108 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 SUPERFAMILY SSF52833 3 100 9.73E-29 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 337 357 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 459 481 6.3E-38 T 12-10-2018 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 307 325 6.3E-38 T 12-10-2018 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 349 367 6.3E-38 T 12-10-2018 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 433 449 6.3E-38 T 12-10-2018 BAMF_3806 345fb25da3e7e941faf4feebadc05536 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 211 230 6.3E-38 T 12-10-2018 BAMF_0471 a06ded0e4bc396fa35334e81e4545894 426 Pfam PF09335 SNARE associated Golgi protein 31 155 1.8E-17 T 12-10-2018 IPR032816 SNARE associated Golgi protein BAMF_3314 1a520b82a5f511a22147ee551577bb6a 106 SUPERFAMILY SSF101386 1 103 2.94E-25 T 12-10-2018 BAMF_3314 1a520b82a5f511a22147ee551577bb6a 106 Gene3D G3DSA:1.10.287.1080 1 102 1.1E-27 T 12-10-2018 BAMF_3314 1a520b82a5f511a22147ee551577bb6a 106 PIRSF PIRSF036521 1 106 2.7E-53 T 12-10-2018 IPR011411 NTP Pyrophosphohydrolase MazG-related BAMF_3314 1a520b82a5f511a22147ee551577bb6a 106 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 30 102 8.1E-12 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BAMF_1659 499e7f6bd6754d9e9775f7c98792c7d0 682 Gene3D G3DSA:1.10.150.20 4 47 4.1E-5 T 12-10-2018 BAMF_1659 499e7f6bd6754d9e9775f7c98792c7d0 682 Pfam PF17191 RecG wedge domain 11 165 2.8E-17 T 12-10-2018 IPR033454 RecG, wedge domain BAMF_1659 499e7f6bd6754d9e9775f7c98792c7d0 682 SUPERFAMILY SSF52540 173 436 6.99E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1659 499e7f6bd6754d9e9775f7c98792c7d0 682 Gene3D G3DSA:3.40.50.300 195 434 7.9E-89 T 12-10-2018 BAMF_1659 499e7f6bd6754d9e9775f7c98792c7d0 682 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 26 648 1.2E-259 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 BAMF_1659 499e7f6bd6754d9e9775f7c98792c7d0 682 SUPERFAMILY SSF52540 369 629 2.2E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1659 499e7f6bd6754d9e9775f7c98792c7d0 682 SUPERFAMILY SSF50249 5 168 6.34E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_1659 499e7f6bd6754d9e9775f7c98792c7d0 682 Gene3D G3DSA:2.40.50.140 48 138 8.6E-10 T 12-10-2018 BAMF_1659 499e7f6bd6754d9e9775f7c98792c7d0 682 Pfam PF00271 Helicase conserved C-terminal domain 452 572 3.4E-20 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_1659 499e7f6bd6754d9e9775f7c98792c7d0 682 Pfam PF00270 DEAD/DEAH box helicase 277 415 7.9E-18 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BAMF_1659 499e7f6bd6754d9e9775f7c98792c7d0 682 Gene3D G3DSA:3.40.50.300 441 613 2.8E-58 T 12-10-2018 BAMF_1659 499e7f6bd6754d9e9775f7c98792c7d0 682 SMART SM00487 253 442 3.3E-34 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_1659 499e7f6bd6754d9e9775f7c98792c7d0 682 SMART SM00490 488 573 3.3E-20 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_3475 8a92c536417b67c08e8d42968d7f538f 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.9E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_3475 8a92c536417b67c08e8d42968d7f538f 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.9E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_3475 8a92c536417b67c08e8d42968d7f538f 260 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BAMF_3475 8a92c536417b67c08e8d42968d7f538f 260 SMART SM00420 6 58 4.2E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_3475 8a92c536417b67c08e8d42968d7f538f 260 Pfam PF00455 DeoR C terminal sensor domain 76 231 5.0E-50 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain BAMF_3475 8a92c536417b67c08e8d42968d7f538f 260 SUPERFAMILY SSF46785 4 78 8.59E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3475 8a92c536417b67c08e8d42968d7f538f 260 Gene3D G3DSA:1.10.10.10 1 58 2.4E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3475 8a92c536417b67c08e8d42968d7f538f 260 SMART SM01134 73 232 7.6E-65 T 12-10-2018 BAMF_3475 8a92c536417b67c08e8d42968d7f538f 260 SUPERFAMILY SSF100950 75 233 6.28E-26 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BAMF_3475 8a92c536417b67c08e8d42968d7f538f 260 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 9.3E-16 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_1384 85711ac2ba498f9bd1b2ff6b5cf6b18c 539 SUPERFAMILY SSF53850 36 533 2.85E-136 T 12-10-2018 BAMF_1384 85711ac2ba498f9bd1b2ff6b5cf6b18c 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 462 1.8E-87 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain BAMF_1384 85711ac2ba498f9bd1b2ff6b5cf6b18c 539 PIRSF PIRSF002741 1 538 5.4E-121 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BAMF_1384 85711ac2ba498f9bd1b2ff6b5cf6b18c 539 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 110 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site BAMF_1384 85711ac2ba498f9bd1b2ff6b5cf6b18c 539 Gene3D G3DSA:3.90.76.10 72 194 3.3E-170 T 12-10-2018 BAMF_1384 85711ac2ba498f9bd1b2ff6b5cf6b18c 539 Gene3D G3DSA:3.40.190.10 51 526 3.3E-170 T 12-10-2018 BAMF_1384 85711ac2ba498f9bd1b2ff6b5cf6b18c 539 Gene3D G3DSA:3.10.105.10 294 512 3.3E-170 T 12-10-2018 BAMF_1172 4fea467b4874132a9ddccec638826cd8 481 Gene3D G3DSA:3.40.640.10 154 372 8.2E-104 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_1172 4fea467b4874132a9ddccec638826cd8 481 SMART SM00345 18 77 1.2E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_1172 4fea467b4874132a9ddccec638826cd8 481 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 7.1E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_1172 4fea467b4874132a9ddccec638826cd8 481 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 7.1E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_1172 4fea467b4874132a9ddccec638826cd8 481 Gene3D G3DSA:1.10.10.10 6 78 6.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1172 4fea467b4874132a9ddccec638826cd8 481 SUPERFAMILY SSF46785 7 87 6.04E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1172 4fea467b4874132a9ddccec638826cd8 481 Pfam PF00155 Aminotransferase class I and II 120 467 2.8E-26 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_1172 4fea467b4874132a9ddccec638826cd8 481 SUPERFAMILY SSF53383 108 478 1.22E-91 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_1172 4fea467b4874132a9ddccec638826cd8 481 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 4.2E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_1172 4fea467b4874132a9ddccec638826cd8 481 Gene3D G3DSA:3.90.1150.10 109 474 8.2E-104 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_3900 fd6d8347fd233e84c5a9235e1809733d 126 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 120 7.2E-16 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain BAMF_3900 fd6d8347fd233e84c5a9235e1809733d 126 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.2E-21 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_3900 fd6d8347fd233e84c5a9235e1809733d 126 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 BAMF_3900 fd6d8347fd233e84c5a9235e1809733d 126 SMART SM00354 1 71 2.3E-36 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_3900 fd6d8347fd233e84c5a9235e1809733d 126 Gene3D G3DSA:3.40.50.2300 57 126 3.5E-16 T 12-10-2018 BAMF_3900 fd6d8347fd233e84c5a9235e1809733d 126 SUPERFAMILY SSF47413 1 60 1.22E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_3900 fd6d8347fd233e84c5a9235e1809733d 126 SUPERFAMILY SSF53822 58 122 5.78E-15 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BAMF_3900 fd6d8347fd233e84c5a9235e1809733d 126 Gene3D G3DSA:1.10.260.40 1 56 1.8E-21 T 12-10-2018 BAMF_3900 fd6d8347fd233e84c5a9235e1809733d 126 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.5E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_3900 fd6d8347fd233e84c5a9235e1809733d 126 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.5E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_2578 e3ad774d9d464fc298c4d103d78e72d6 218 Pfam PF04239 Protein of unknown function (DUF421) 89 192 7.1E-37 T 12-10-2018 IPR007353 Protein of unknown function DUF421 BAMF_2578 e3ad774d9d464fc298c4d103d78e72d6 218 Gene3D G3DSA:3.30.240.20 159 216 2.7E-13 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_2578 e3ad774d9d464fc298c4d103d78e72d6 218 Gene3D G3DSA:3.30.240.20 81 154 1.2E-25 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_0484 8ebdaf89d9521353882edb997b73e8a4 396 SUPERFAMILY SSF103473 11 392 3.4E-52 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0484 8ebdaf89d9521353882edb997b73e8a4 396 Pfam PF07690 Major Facilitator Superfamily 26 330 2.7E-32 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0484 8ebdaf89d9521353882edb997b73e8a4 396 Gene3D G3DSA:1.20.1250.20 13 394 2.6E-42 T 12-10-2018 BAMF_1900 c0b66c69404ca56384fe17eb392deff7 472 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 89 104 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_1900 c0b66c69404ca56384fe17eb392deff7 472 Pfam PF01235 Sodium:alanine symporter family 52 444 4.6E-158 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_1900 c0b66c69404ca56384fe17eb392deff7 472 PRINTS PR00175 Sodium/alanine symporter signature 207 226 1.8E-61 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_1900 c0b66c69404ca56384fe17eb392deff7 472 PRINTS PR00175 Sodium/alanine symporter signature 89 111 1.8E-61 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_1900 c0b66c69404ca56384fe17eb392deff7 472 PRINTS PR00175 Sodium/alanine symporter signature 179 197 1.8E-61 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_1900 c0b66c69404ca56384fe17eb392deff7 472 PRINTS PR00175 Sodium/alanine symporter signature 298 316 1.8E-61 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_1900 c0b66c69404ca56384fe17eb392deff7 472 PRINTS PR00175 Sodium/alanine symporter signature 341 363 1.8E-61 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_1900 c0b66c69404ca56384fe17eb392deff7 472 PRINTS PR00175 Sodium/alanine symporter signature 401 421 1.8E-61 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_1900 c0b66c69404ca56384fe17eb392deff7 472 TIGRFAM TIGR00835 agcS: amino acid carrier protein 17 432 2.2E-164 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_2792 94002da658d5f4cd6da0c80b5ddd3178 265 Pfam PF01636 Phosphotransferase enzyme family 17 228 9.2E-23 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase BAMF_2792 94002da658d5f4cd6da0c80b5ddd3178 265 SUPERFAMILY SSF56112 2 230 3.19E-33 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BAMF_2792 94002da658d5f4cd6da0c80b5ddd3178 265 Gene3D G3DSA:3.90.1200.10 79 263 4.4E-19 T 12-10-2018 BAMF_2867 cc2ab7c3ef14cf5e2658df9ba3e33ff8 509 Gene3D G3DSA:3.30.479.30 77 193 4.1E-38 T 12-10-2018 BAMF_2867 cc2ab7c3ef14cf5e2658df9ba3e33ff8 509 Pfam PF01145 SPFH domain / Band 7 family 30 219 7.8E-25 T 12-10-2018 IPR001107 Band 7 domain BAMF_2867 cc2ab7c3ef14cf5e2658df9ba3e33ff8 509 Pfam PF15975 Flotillin 368 459 4.9E-15 T 12-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 BAMF_2867 cc2ab7c3ef14cf5e2658df9ba3e33ff8 509 SMART SM00244 119 301 3.1E-15 T 12-10-2018 IPR001107 Band 7 domain BAMF_2867 cc2ab7c3ef14cf5e2658df9ba3e33ff8 509 SUPERFAMILY SSF117892 68 210 1.57E-34 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily BAMF_1700 8a91c394eea24361378e724c5a3ab3e1 258 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 177 256 2.0E-25 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BAMF_1700 8a91c394eea24361378e724c5a3ab3e1 258 Pfam PF00460 Flagella basal body rod protein 5 35 3.9E-13 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BAMF_1700 8a91c394eea24361378e724c5a3ab3e1 258 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 237 9.5E-57 T 12-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 BAMF_1700 8a91c394eea24361378e724c5a3ab3e1 258 SUPERFAMILY SSF117143 86 218 1.57E-34 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BAMF_1700 8a91c394eea24361378e724c5a3ab3e1 258 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BAMF_1700 8a91c394eea24361378e724c5a3ab3e1 258 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 128 2.6E-43 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BAMF_1700 8a91c394eea24361378e724c5a3ab3e1 258 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 144 239 4.9E-31 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BAMF_1587 b467df76031bc5f83b770b1d001821e0 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 143 4.9E-66 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 BAMF_1587 b467df76031bc5f83b770b1d001821e0 143 Gene3D G3DSA:2.40.330.20 1 141 2.9E-54 T 12-10-2018 IPR038619 MraZ superfamily BAMF_1587 b467df76031bc5f83b770b1d001821e0 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 138 2.0E-76 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 BAMF_1587 b467df76031bc5f83b770b1d001821e0 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 59.742 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 BAMF_1587 b467df76031bc5f83b770b1d001821e0 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 4.5E-24 T 12-10-2018 IPR020603 MraZ domain BAMF_1587 b467df76031bc5f83b770b1d001821e0 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 141 5.0E-27 T 12-10-2018 IPR020603 MraZ domain BAMF_1587 b467df76031bc5f83b770b1d001821e0 143 SUPERFAMILY SSF89447 1 136 1.05E-52 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily BAMF_2897 69ea19c08ff56dd92681493c8a44504e 1257 SUPERFAMILY SSF57997 22 155 3.86E-6 T 12-10-2018 BAMF_2897 69ea19c08ff56dd92681493c8a44504e 1257 Pfam PF01464 Transglycosylase SLT domain 1040 1139 5.3E-13 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 BAMF_2897 69ea19c08ff56dd92681493c8a44504e 1257 SUPERFAMILY SSF53955 1024 1111 5.63E-12 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BAMF_2897 69ea19c08ff56dd92681493c8a44504e 1257 Gene3D G3DSA:1.10.530.10 1018 1123 4.5E-8 T 12-10-2018 BAMF_2897 69ea19c08ff56dd92681493c8a44504e 1257 Pfam PF10145 Phage-related minor tail protein 232 424 2.6E-21 T 12-10-2018 IPR010090 Phage tail tape measure protein BAMF_3573 4dadd55b4e4754942c70fec978625bec 381 Pfam PF13424 Tetratricopeptide repeat 189 253 1.4E-10 T 12-10-2018 BAMF_3573 4dadd55b4e4754942c70fec978625bec 381 SMART SM00028 262 295 61.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_3573 4dadd55b4e4754942c70fec978625bec 381 SMART SM00028 222 255 0.0026 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_3573 4dadd55b4e4754942c70fec978625bec 381 SMART SM00028 337 370 340.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_3573 4dadd55b4e4754942c70fec978625bec 381 SMART SM00028 141 174 260.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_3573 4dadd55b4e4754942c70fec978625bec 381 SMART SM00028 182 215 11.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_3573 4dadd55b4e4754942c70fec978625bec 381 Gene3D G3DSA:1.25.40.10 1 381 3.9E-140 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_3573 4dadd55b4e4754942c70fec978625bec 381 SUPERFAMILY SSF48452 105 308 8.79E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_2564 c9bb0619468e1ba5fbc62c1ff459c67b 254 Gene3D G3DSA:3.40.50.720 1 254 1.6E-80 T 12-10-2018 BAMF_2564 c9bb0619468e1ba5fbc62c1ff459c67b 254 SUPERFAMILY SSF69572 4 244 2.09E-62 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BAMF_2564 c9bb0619468e1ba5fbc62c1ff459c67b 254 Pfam PF00899 ThiF family 6 158 3.0E-39 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BAMF_3851 7f209f7055586565332e15f148781f87 472 SUPERFAMILY SSF55874 310 471 2.1E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3851 7f209f7055586565332e15f148781f87 472 SUPERFAMILY SSF158472 192 242 8.76E-7 T 12-10-2018 BAMF_3851 7f209f7055586565332e15f148781f87 472 SMART SM00304 192 245 4.4E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_3851 7f209f7055586565332e15f148781f87 472 Gene3D G3DSA:3.30.565.10 326 472 6.1E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3851 7f209f7055586565332e15f148781f87 472 SUPERFAMILY SSF47384 239 318 9.42E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_3851 7f209f7055586565332e15f148781f87 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 255 318 2.1E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_3851 7f209f7055586565332e15f148781f87 472 SMART SM00387 362 472 3.9E-35 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3851 7f209f7055586565332e15f148781f87 472 Gene3D G3DSA:1.10.287.130 249 319 1.8E-21 T 12-10-2018 BAMF_3851 7f209f7055586565332e15f148781f87 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 427 8.1E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3851 7f209f7055586565332e15f148781f87 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 471 8.1E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3851 7f209f7055586565332e15f148781f87 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 8.1E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3851 7f209f7055586565332e15f148781f87 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 8.1E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3851 7f209f7055586565332e15f148781f87 472 SMART SM00388 253 320 7.0E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_3851 7f209f7055586565332e15f148781f87 472 Gene3D G3DSA:1.20.1480.50 148 248 3.8E-6 T 12-10-2018 BAMF_3851 7f209f7055586565332e15f148781f87 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 471 6.0E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0639 30c3cfb89093f3b6f8df42c07758c2fb 239 Gene3D G3DSA:3.30.470.20 87 223 1.0E-97 T 12-10-2018 BAMF_0639 30c3cfb89093f3b6f8df42c07758c2fb 239 Gene3D G3DSA:3.30.200.20 9 234 1.0E-97 T 12-10-2018 BAMF_0639 30c3cfb89093f3b6f8df42c07758c2fb 239 SUPERFAMILY SSF56104 3 237 2.29E-83 T 12-10-2018 BAMF_0639 30c3cfb89093f3b6f8df42c07758c2fb 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 175 183 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BAMF_0639 30c3cfb89093f3b6f8df42c07758c2fb 239 Pfam PF01259 SAICAR synthetase 9 233 5.1E-69 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BAMF_0639 30c3cfb89093f3b6f8df42c07758c2fb 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 6 237 33.763 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BAMF_0639 30c3cfb89093f3b6f8df42c07758c2fb 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 236 4.6E-86 T 12-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 BAMF_0194 cd451d6a906580ad98a305445da7bb0f 214 SMART SM00421 153 210 9.4E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_0194 cd451d6a906580ad98a305445da7bb0f 214 Gene3D G3DSA:3.40.50.12740 1 214 3.8E-67 T 12-10-2018 BAMF_0194 cd451d6a906580ad98a305445da7bb0f 214 SUPERFAMILY SSF52172 2 128 5.69E-34 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_0194 cd451d6a906580ad98a305445da7bb0f 214 SMART SM00448 1 114 5.5E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0194 cd451d6a906580ad98a305445da7bb0f 214 SUPERFAMILY SSF46894 145 212 1.02E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_0194 cd451d6a906580ad98a305445da7bb0f 214 Pfam PF00072 Response regulator receiver domain 3 114 6.6E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0194 cd451d6a906580ad98a305445da7bb0f 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_0194 cd451d6a906580ad98a305445da7bb0f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 3.4E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_0194 cd451d6a906580ad98a305445da7bb0f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 3.4E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_0194 cd451d6a906580ad98a305445da7bb0f 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 3.4E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_0194 cd451d6a906580ad98a305445da7bb0f 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 7.8E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 Gene3D G3DSA:3.30.470.20 659 929 5.4E-108 T 12-10-2018 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 SUPERFAMILY SSF52440 1 127 7.63E-50 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1057 13.112 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 8.4E-40 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1063 13.552 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 Gene3D G3DSA:3.40.50.1380 930 1060 1.5E-35 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 1.3E-77 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 866 9.8E-39 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 SUPERFAMILY SSF56059 128 399 7.95E-108 T 12-10-2018 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 Gene3D G3DSA:3.40.50.20 1 116 1.8E-48 T 12-10-2018 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 Pfam PF02142 MGS-like domain 952 1036 4.4E-18 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 Gene3D G3DSA:3.30.470.20 120 401 1.7E-124 T 12-10-2018 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 SUPERFAMILY SSF56059 666 927 1.43E-101 T 12-10-2018 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 SUPERFAMILY SSF52440 550 668 2.16E-47 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 SUPERFAMILY SSF48108 395 546 7.45E-48 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 SMART SM01096 420 540 3.8E-66 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1047 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 Gene3D G3DSA:1.10.1030.10 402 546 1.8E-44 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 6.5E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.5E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.5E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.5E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 6.5E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.5E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.5E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 SUPERFAMILY SSF52335 935 1052 5.76E-31 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 Gene3D G3DSA:3.40.50.20 547 655 1.2E-45 T 12-10-2018 BAMF_1623 ea59a698698c8969053d6433b6dd8132 1071 SMART SM00851 949 1036 4.9E-26 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain BAMF_2461 b83fca4d3cb05af21def09a1a5915480 186 Gene3D G3DSA:1.10.3210.10 1 185 9.8E-60 T 12-10-2018 BAMF_2461 b83fca4d3cb05af21def09a1a5915480 186 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 10 181 5.5E-74 T 12-10-2018 IPR005249 Conserved hypothetical protein CHP00488 BAMF_2461 b83fca4d3cb05af21def09a1a5915480 186 SUPERFAMILY SSF109604 4 183 2.8E-36 T 12-10-2018 BAMF_2461 b83fca4d3cb05af21def09a1a5915480 186 SMART SM00471 14 141 3.3E-11 T 12-10-2018 IPR003607 HD/PDEase domain BAMF_2461 b83fca4d3cb05af21def09a1a5915480 186 Pfam PF01966 HD domain 18 130 9.0E-16 T 12-10-2018 IPR006674 HD domain BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 Gene3D G3DSA:1.10.150.700 1235 1286 5.6E-15 T 12-10-2018 BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 Gene3D G3DSA:1.10.150.700 1096 1184 2.7E-36 T 12-10-2018 BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 SMART SM00479 420 587 1.5E-57 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1437 464.242 T 12-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 SUPERFAMILY SSF50249 234 321 2.06E-11 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 SUPERFAMILY SSF53098 420 876 3.64E-109 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 Pfam PF14480 DNA polymerase III polC-type N-terminus I 10 81 4.2E-21 T 12-10-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 Pfam PF02811 PHP domain 336 695 3.9E-55 T 12-10-2018 IPR004013 PHP domain GO:0003824 BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 413 638 1.2E-78 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 Pfam PF11490 DNA polymerase III polC-type N-terminus II 96 208 5.3E-29 T 12-10-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 Gene3D G3DSA:1.10.100.20 995 1042 1.7E-58 T 12-10-2018 BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 Gene3D G3DSA:1.10.150.870 1288 1423 6.3E-53 T 12-10-2018 BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 Pfam PF00929 Exonuclease 422 577 8.5E-43 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 230 1437 0.0 T 12-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 Gene3D G3DSA:3.30.420.10 415 590 2.0E-52 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 825 1237 3.2E-98 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 Pfam PF14579 Helix-hairpin-helix motif 1353 1429 2.0E-9 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 Gene3D G3DSA:2.40.50.140 219 320 5.0E-33 T 12-10-2018 BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 SMART SM00481 335 402 2.2E-29 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BAMF_1730 8f9b3b89ac5a808f2a2479bd29972448 1437 Gene3D G3DSA:3.30.1900.20 973 1095 1.7E-58 T 12-10-2018 BAMF_2895 5b032d080092ee71afd4d73a9de176ef 626 Gene3D G3DSA:3.55.50.40 91 179 7.5E-18 T 12-10-2018 BAMF_2895 5b032d080092ee71afd4d73a9de176ef 626 Pfam PF06605 Prophage endopeptidase tail 30 473 1.3E-38 T 12-10-2018 IPR010572 Prophage tail endopeptidase BAMF_2680 a2d616eb8315e0643ded7ca5e916464d 431 SUPERFAMILY SSF53850 32 430 6.29E-62 T 12-10-2018 BAMF_2680 a2d616eb8315e0643ded7ca5e916464d 431 Pfam PF01547 Bacterial extracellular solute-binding protein 44 334 2.4E-40 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein BAMF_2680 a2d616eb8315e0643ded7ca5e916464d 431 Gene3D G3DSA:3.40.190.10 20 431 1.8E-65 T 12-10-2018 BAMF_0255 2130cd02324544e89cc4d2d328af5075 559 Gene3D G3DSA:3.90.400.10 105 174 1.9E-194 T 12-10-2018 BAMF_0255 2130cd02324544e89cc4d2d328af5075 559 SUPERFAMILY SSF51445 4 475 9.06E-149 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_0255 2130cd02324544e89cc4d2d328af5075 559 Gene3D G3DSA:2.60.40.1180 482 558 8.6E-18 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta BAMF_0255 2130cd02324544e89cc4d2d328af5075 559 Gene3D G3DSA:3.20.20.80 5 473 1.9E-194 T 12-10-2018 BAMF_0255 2130cd02324544e89cc4d2d328af5075 559 SMART SM00642 13 420 3.0E-151 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BAMF_0255 2130cd02324544e89cc4d2d328af5075 559 SUPERFAMILY SSF51011 481 558 1.89E-16 T 12-10-2018 BAMF_0255 2130cd02324544e89cc4d2d328af5075 559 Pfam PF00128 Alpha amylase, catalytic domain 28 376 3.6E-116 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BAMF_3365 66ac9572ed44275292efb54a1430d989 468 SUPERFAMILY SSF51126 49 463 4.72E-65 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BAMF_3365 66ac9572ed44275292efb54a1430d989 468 SMART SM00710 189 214 3400.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_3365 66ac9572ed44275292efb54a1430d989 468 SMART SM00710 249 283 2.6 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_3365 66ac9572ed44275292efb54a1430d989 468 SMART SM00710 284 305 12.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_3365 66ac9572ed44275292efb54a1430d989 468 SMART SM00710 216 238 640.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_3365 66ac9572ed44275292efb54a1430d989 468 SMART SM00710 156 185 14.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_3365 66ac9572ed44275292efb54a1430d989 468 SMART SM00710 312 334 0.1 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_3365 66ac9572ed44275292efb54a1430d989 468 SMART SM00710 371 420 10000.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_3365 66ac9572ed44275292efb54a1430d989 468 SMART SM00710 125 154 4400.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_3365 66ac9572ed44275292efb54a1430d989 468 SMART SM00722 72 237 2.5E-5 T 12-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain BAMF_3365 66ac9572ed44275292efb54a1430d989 468 Pfam PF13229 Right handed beta helix region 148 337 4.4E-14 T 12-10-2018 IPR039448 Right handed beta helix domain BAMF_3365 66ac9572ed44275292efb54a1430d989 468 Gene3D G3DSA:2.160.20.10 35 456 1.0E-62 T 12-10-2018 IPR012334 Pectin lyase fold BAMF_0391 240b496f8937e4fbc55707dd5da3be39 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.0E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BAMF_0391 240b496f8937e4fbc55707dd5da3be39 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.0E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BAMF_0391 240b496f8937e4fbc55707dd5da3be39 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.0E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BAMF_0391 240b496f8937e4fbc55707dd5da3be39 144 SUPERFAMILY SSF46785 2 62 5.04E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0391 240b496f8937e4fbc55707dd5da3be39 144 Pfam PF13404 AsnC-type helix-turn-helix domain 3 44 3.2E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BAMF_0391 240b496f8937e4fbc55707dd5da3be39 144 SUPERFAMILY SSF54909 64 137 1.61E-16 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BAMF_0391 240b496f8937e4fbc55707dd5da3be39 144 Gene3D G3DSA:3.30.70.920 51 143 6.3E-26 T 12-10-2018 BAMF_0391 240b496f8937e4fbc55707dd5da3be39 144 SMART SM00344 3 109 2.4E-44 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BAMF_0391 240b496f8937e4fbc55707dd5da3be39 144 Gene3D G3DSA:1.10.10.10 1 50 2.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0391 240b496f8937e4fbc55707dd5da3be39 144 Pfam PF01037 Lrp/AsnC ligand binding domain 69 135 4.9E-13 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BAMF_0937 a6240d50ae2a210263bbcf3845fc44c1 182 SUPERFAMILY SSF56349 5 179 3.53E-37 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BAMF_0937 a6240d50ae2a210263bbcf3845fc44c1 182 Gene3D G3DSA:1.10.443.10 3 182 1.6E-31 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BAMF_0937 a6240d50ae2a210263bbcf3845fc44c1 182 Pfam PF00589 Phage integrase family 10 167 1.1E-25 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BAMF_0149 caf87e147fbe24a5b078140517068207 145 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 12-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 BAMF_0149 caf87e147fbe24a5b078140517068207 145 Pfam PF00572 Ribosomal protein L13 15 139 8.3E-58 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BAMF_0149 caf87e147fbe24a5b078140517068207 145 SUPERFAMILY SSF52161 6 143 6.41E-60 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 BAMF_0149 caf87e147fbe24a5b078140517068207 145 PIRSF PIRSF002181 1 143 1.9E-50 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BAMF_0149 caf87e147fbe24a5b078140517068207 145 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 144 28.544 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BAMF_0149 caf87e147fbe24a5b078140517068207 145 Gene3D G3DSA:3.90.1180.10 1 143 8.9E-62 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 BAMF_0149 caf87e147fbe24a5b078140517068207 145 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 142 3.8E-66 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2606 7537f0b78855f5cc5199a2405caaf03d 226 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 8 209 4.0E-53 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 BAMF_2606 7537f0b78855f5cc5199a2405caaf03d 226 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 108 206 2.7E-30 T 12-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 BAMF_2606 7537f0b78855f5cc5199a2405caaf03d 226 SUPERFAMILY SSF63848 106 210 9.68E-30 T 12-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 BAMF_2606 7537f0b78855f5cc5199a2405caaf03d 226 Gene3D G3DSA:2.160.20.70 101 224 2.8E-35 T 12-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 BAMF_2606 7537f0b78855f5cc5199a2405caaf03d 226 Gene3D G3DSA:3.30.160.540 7 87 3.6E-31 T 12-10-2018 BAMF_2606 7537f0b78855f5cc5199a2405caaf03d 226 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 8 210 22.254 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 BAMF_1675 42dbf36198f6a93519c15d8733524d56 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1675 42dbf36198f6a93519c15d8733524d56 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1675 42dbf36198f6a93519c15d8733524d56 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1675 42dbf36198f6a93519c15d8733524d56 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 2 113 6.6E-53 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1675 42dbf36198f6a93519c15d8733524d56 115 Gene3D G3DSA:2.30.30.790 2 115 4.7E-15 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1675 42dbf36198f6a93519c15d8733524d56 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_1675 42dbf36198f6a93519c15d8733524d56 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 32.952 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1675 42dbf36198f6a93519c15d8733524d56 115 SUPERFAMILY SSF50104 2 114 4.41E-49 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily BAMF_1675 42dbf36198f6a93519c15d8733524d56 115 Pfam PF01245 Ribosomal protein L19 4 112 4.0E-54 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1675 42dbf36198f6a93519c15d8733524d56 115 PIRSF PIRSF002191 1 115 6.8E-52 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1677 66a02b469e030481f1975039dc7af6be 255 Hamap MF_00052_B Ribonuclease HII [rnhB]. 73 251 36.814 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 BAMF_1677 66a02b469e030481f1975039dc7af6be 255 Pfam PF01351 Ribonuclease HII 75 250 1.2E-30 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain BAMF_1677 66a02b469e030481f1975039dc7af6be 255 Gene3D G3DSA:3.30.420.10 49 255 5.1E-77 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BAMF_1677 66a02b469e030481f1975039dc7af6be 255 SUPERFAMILY SSF53098 62 254 3.49E-66 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BAMF_3093 4e005968d287d3860d683a136ff287a2 451 Gene3D G3DSA:3.40.50.10810 6 222 2.1E-24 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily BAMF_3093 4e005968d287d3860d683a136ff287a2 451 Gene3D G3DSA:3.40.50.300 275 433 7.3E-22 T 12-10-2018 BAMF_3093 4e005968d287d3860d683a136ff287a2 451 SUPERFAMILY SSF52540 120 447 2.16E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3093 4e005968d287d3860d683a136ff287a2 451 SMART SM00487 1 189 2.3E-12 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_3093 4e005968d287d3860d683a136ff287a2 451 Pfam PF00176 SNF2 family N-terminal domain 24 263 2.8E-17 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 BAMF_3093 4e005968d287d3860d683a136ff287a2 451 SUPERFAMILY SSF52540 2 217 2.1E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3622 77925d1dc23375fdc2db9cc0de06a8c4 373 Gene3D G3DSA:3.20.20.70 1 303 1.5E-113 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_3622 77925d1dc23375fdc2db9cc0de06a8c4 373 Pfam PF08666 SAF domain 309 364 2.6E-6 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BAMF_3622 77925d1dc23375fdc2db9cc0de06a8c4 373 SUPERFAMILY SSF51569 4 279 5.37E-84 T 12-10-2018 BAMF_3622 77925d1dc23375fdc2db9cc0de06a8c4 373 SMART SM00858 303 365 1.4E-6 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BAMF_3622 77925d1dc23375fdc2db9cc0de06a8c4 373 SUPERFAMILY SSF51269 299 364 2.04E-17 T 12-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 BAMF_3622 77925d1dc23375fdc2db9cc0de06a8c4 373 Pfam PF03102 NeuB family 37 274 7.9E-76 T 12-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 BAMF_3622 77925d1dc23375fdc2db9cc0de06a8c4 373 Gene3D G3DSA:3.90.1210.10 304 373 3.7E-25 T 12-10-2018 BAMF_2144 4cc525eb02e3df54f8fe44be754b3dbb 325 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 325 37.627 T 12-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 BAMF_2144 4cc525eb02e3df54f8fe44be754b3dbb 325 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 324 1.1E-80 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BAMF_2144 4cc525eb02e3df54f8fe44be754b3dbb 325 Pfam PF02237 Biotin protein ligase C terminal domain 281 324 4.1E-9 T 12-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BAMF_2144 4cc525eb02e3df54f8fe44be754b3dbb 325 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 9 77 2.4E-26 T 12-10-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 BAMF_2144 4cc525eb02e3df54f8fe44be754b3dbb 325 Gene3D G3DSA:3.30.930.10 69 277 6.0E-67 T 12-10-2018 BAMF_2144 4cc525eb02e3df54f8fe44be754b3dbb 325 Gene3D G3DSA:2.30.30.100 280 325 3.2E-7 T 12-10-2018 BAMF_2144 4cc525eb02e3df54f8fe44be754b3dbb 325 SUPERFAMILY SSF55681 72 276 2.86E-60 T 12-10-2018 BAMF_2144 4cc525eb02e3df54f8fe44be754b3dbb 325 SUPERFAMILY SSF50037 283 324 8.24E-5 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal BAMF_2144 4cc525eb02e3df54f8fe44be754b3dbb 325 SUPERFAMILY SSF46785 5 62 1.07E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2144 4cc525eb02e3df54f8fe44be754b3dbb 325 Pfam PF03099 Biotin/lipoate A/B protein ligase family 91 214 2.5E-18 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BAMF_2144 4cc525eb02e3df54f8fe44be754b3dbb 325 Gene3D G3DSA:1.10.10.10 2 65 2.0E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2144 4cc525eb02e3df54f8fe44be754b3dbb 325 Pfam PF08279 HTH domain 7 60 2.9E-15 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BAMF_1495 eaf392cb5ab2f627e41097df51e553f2 374 Pfam PF07687 Peptidase dimerisation domain 179 269 3.9E-11 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain BAMF_1495 eaf392cb5ab2f627e41097df51e553f2 374 SUPERFAMILY SSF55031 178 282 2.36E-28 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BAMF_1495 eaf392cb5ab2f627e41097df51e553f2 374 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 3 372 62.912 T 12-10-2018 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941 BAMF_1495 eaf392cb5ab2f627e41097df51e553f2 374 SUPERFAMILY SSF53187 3 371 1.1E-66 T 12-10-2018 BAMF_1495 eaf392cb5ab2f627e41097df51e553f2 374 PIRSF PIRSF005962 1 374 1.6E-107 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BAMF_1495 eaf392cb5ab2f627e41097df51e553f2 374 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 6 361 2.0E-89 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BAMF_1495 eaf392cb5ab2f627e41097df51e553f2 374 Gene3D G3DSA:3.40.630.10 6 357 1.3E-119 T 12-10-2018 BAMF_1495 eaf392cb5ab2f627e41097df51e553f2 374 Pfam PF01546 Peptidase family M20/M25/M40 66 368 3.1E-24 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BAMF_1495 eaf392cb5ab2f627e41097df51e553f2 374 Gene3D G3DSA:3.30.70.360 173 287 1.3E-119 T 12-10-2018 BAMF_3335 2309d700c89a500b78ab452afa9c81c7 212 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 204 1.9E-68 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BAMF_3335 2309d700c89a500b78ab452afa9c81c7 212 SUPERFAMILY SSF52317 2 204 4.59E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_3335 2309d700c89a500b78ab452afa9c81c7 212 Pfam PF00117 Glutamine amidotransferase class-I 4 201 3.8E-19 T 12-10-2018 IPR017926 Glutamine amidotransferase BAMF_3335 2309d700c89a500b78ab452afa9c81c7 212 PIRSF PIRSF000495 1 207 2.1E-72 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BAMF_3335 2309d700c89a500b78ab452afa9c81c7 212 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 204 35.589 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BAMF_3335 2309d700c89a500b78ab452afa9c81c7 212 Gene3D G3DSA:3.40.50.880 1 212 3.2E-71 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_3785 a6b401980c2a6be1ec909ee6c953001c 636 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 8 196 4.7E-29 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BAMF_3785 a6b401980c2a6be1ec909ee6c953001c 636 SUPERFAMILY SSF52518 416 629 2.76E-55 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_3785 a6b401980c2a6be1ec909ee6c953001c 636 Gene3D G3DSA:3.40.50.1220 213 401 6.3E-31 T 12-10-2018 BAMF_3785 a6b401980c2a6be1ec909ee6c953001c 636 SUPERFAMILY SSF52467 212 381 1.57E-35 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BAMF_3785 a6b401980c2a6be1ec909ee6c953001c 636 Gene3D G3DSA:3.40.50.970 2 207 1.4E-29 T 12-10-2018 BAMF_3785 a6b401980c2a6be1ec909ee6c953001c 636 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 475 494 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 BAMF_3785 a6b401980c2a6be1ec909ee6c953001c 636 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 439 591 1.9E-41 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BAMF_3785 a6b401980c2a6be1ec909ee6c953001c 636 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 6 633 1.3E-264 T 12-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 BAMF_3785 a6b401980c2a6be1ec909ee6c953001c 636 Gene3D G3DSA:3.40.50.970 413 603 4.2E-46 T 12-10-2018 BAMF_3785 a6b401980c2a6be1ec909ee6c953001c 636 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 221 353 2.7E-28 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BAMF_3785 a6b401980c2a6be1ec909ee6c953001c 636 Hamap MF_01669 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase [iolD]. 2 636 59.601 T 12-10-2018 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes GO:0000287|GO:0016787|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 BAMF_3785 a6b401980c2a6be1ec909ee6c953001c 636 SUPERFAMILY SSF52518 3 210 2.01E-29 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 Gene3D G3DSA:1.10.630.10 3 470 2.5E-166 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 Pfam PF00258 Flavodoxin 488 620 1.3E-26 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 Pfam PF00175 Oxidoreductase NAD-binding domain 904 1014 1.4E-16 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 SUPERFAMILY SSF63380 662 888 6.31E-69 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 PRINTS PR00369 Flavodoxin signature 487 500 7.0E-13 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 PRINTS PR00369 Flavodoxin signature 534 545 7.0E-13 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 PRINTS PR00369 Flavodoxin signature 565 575 7.0E-13 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 PRINTS PR00369 Flavodoxin signature 590 609 7.0E-13 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 Pfam PF00667 FAD binding domain 663 871 6.0E-44 T 12-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 Gene3D G3DSA:3.40.50.360 483 634 3.6E-42 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 SUPERFAMILY SSF48264 4 453 3.67E-104 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 PIRSF PIRSF000209 1 1053 0.0 T 12-10-2018 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase GO:0003958|GO:0055114|GO:0070330 KEGG: 00071+1.14.14.1|KEGG: 00140+1.14.14.1|KEGG: 00232+1.14.14.1|KEGG: 00380+1.14.14.1|KEGG: 00590+1.14.14.1|KEGG: 00591+1.14.14.1|KEGG: 00627+1.14.14.1|KEGG: 00830+1.14.14.1|KEGG: 00980+1.14.14.1|KEGG: 00982+1.14.14.1|MetaCyc: PWY-5451|MetaCyc: PWY-5665|MetaCyc: PWY-6398|MetaCyc: PWY-6992|MetaCyc: PWY-7466|MetaCyc: PWY-7826 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 SUPERFAMILY SSF52343 891 1050 5.11E-45 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 Pfam PF00067 Cytochrome P450 17 449 4.1E-83 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 396 405 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 698 708 5.8E-31 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 831 838 5.8E-31 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 945 956 5.8E-31 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 903 922 5.8E-31 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 932 941 5.8E-31 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 976 992 5.8E-31 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 866 875 5.8E-31 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 999 1007 5.8E-31 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 Gene3D G3DSA:3.40.50.80 892 1052 8.8E-53 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 SUPERFAMILY SSF52218 483 635 2.3E-40 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 Gene3D G3DSA:2.40.30.10 670 880 8.9E-73 T 12-10-2018 BAMF_2522 60daeea971479481a1b5571b93e57dd6 1053 Gene3D G3DSA:1.20.990.10 708 829 8.9E-73 T 12-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 BAMF_2299 20042e653bca7b3f45ece50b7ed0ae9b 298 SUPERFAMILY SSF111331 4 296 2.94E-74 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BAMF_2299 20042e653bca7b3f45ece50b7ed0ae9b 298 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 127 4.0E-32 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BAMF_2299 20042e653bca7b3f45ece50b7ed0ae9b 298 SMART SM00046 5 131 4.2E-19 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BAMF_2299 20042e653bca7b3f45ece50b7ed0ae9b 298 Gene3D G3DSA:3.40.50.10330 8 125 1.4E-80 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BAMF_2299 20042e653bca7b3f45ece50b7ed0ae9b 298 Gene3D G3DSA:2.60.200.40 126 279 1.4E-80 T 12-10-2018 BAMF_2299 20042e653bca7b3f45ece50b7ed0ae9b 298 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 4 294 1.3E-103 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase BAMF_1546 30f3f22131cb7357b0b3a3cfd4a7e7c9 545 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 249 396 8.7E-52 T 12-10-2018 IPR013856 Peptidase M4 domain GO:0004222 BAMF_1546 30f3f22131cb7357b0b3a3cfd4a7e7c9 545 SUPERFAMILY SSF55486 246 545 6.78E-100 T 12-10-2018 BAMF_1546 30f3f22131cb7357b0b3a3cfd4a7e7c9 545 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 351 371 2.1E-28 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BAMF_1546 30f3f22131cb7357b0b3a3cfd4a7e7c9 545 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 408 419 2.1E-28 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BAMF_1546 30f3f22131cb7357b0b3a3cfd4a7e7c9 545 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 387 403 2.1E-28 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BAMF_1546 30f3f22131cb7357b0b3a3cfd4a7e7c9 545 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 472 488 2.1E-28 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 BAMF_1546 30f3f22131cb7357b0b3a3cfd4a7e7c9 545 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 399 544 1.3E-46 T 12-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 BAMF_1546 30f3f22131cb7357b0b3a3cfd4a7e7c9 545 Gene3D G3DSA:3.10.170.10 248 400 7.4E-57 T 12-10-2018 BAMF_1546 30f3f22131cb7357b0b3a3cfd4a7e7c9 545 Gene3D G3DSA:1.10.390.10 401 545 6.2E-56 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily BAMF_1546 30f3f22131cb7357b0b3a3cfd4a7e7c9 545 Pfam PF03413 Peptidase propeptide and YPEB domain 163 239 8.3E-10 T 12-10-2018 IPR025711 PepSY domain BAMF_1546 30f3f22131cb7357b0b3a3cfd4a7e7c9 545 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 102 150 1.0E-14 T 12-10-2018 IPR011096 FTP domain BAMF_1127 f63ae43c9b3f04985a5ca86883c504de 468 SUPERFAMILY SSF50022 411 468 1.45E-6 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BAMF_1127 f63ae43c9b3f04985a5ca86883c504de 468 Pfam PF01266 FAD dependent oxidoreductase 32 376 1.4E-43 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BAMF_1127 f63ae43c9b3f04985a5ca86883c504de 468 Gene3D G3DSA:3.50.50.60 32 378 3.3E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1127 f63ae43c9b3f04985a5ca86883c504de 468 Gene3D G3DSA:3.30.9.10 125 336 3.3E-45 T 12-10-2018 BAMF_1127 f63ae43c9b3f04985a5ca86883c504de 468 SUPERFAMILY SSF51905 29 384 5.31E-32 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0790 fc13cacd6b1dc6f625f16b23dfb9c08a 774 Gene3D G3DSA:2.40.300.10 608 772 4.7E-67 T 12-10-2018 BAMF_0790 fc13cacd6b1dc6f625f16b23dfb9c08a 774 SUPERFAMILY SSF51126 64 383 1.28E-34 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BAMF_0790 fc13cacd6b1dc6f625f16b23dfb9c08a 774 Gene3D G3DSA:2.160.20.10 56 515 3.6E-115 T 12-10-2018 IPR012334 Pectin lyase fold BAMF_0790 fc13cacd6b1dc6f625f16b23dfb9c08a 774 Gene3D G3DSA:4.10.80.40 661 700 4.7E-67 T 12-10-2018 BAMF_0790 fc13cacd6b1dc6f625f16b23dfb9c08a 774 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 559 774 7.3E-75 T 12-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain BAMF_0790 fc13cacd6b1dc6f625f16b23dfb9c08a 774 Pfam PF12708 Pectate lyase superfamily protein 66 272 1.8E-17 T 12-10-2018 IPR024535 Pectate lyase superfamily protein BAMF_0763 7eeeba310da0273c96b6398a7326acdb 351 Pfam PF01699 Sodium/calcium exchanger protein 26 178 3.1E-22 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BAMF_0763 7eeeba310da0273c96b6398a7326acdb 351 Pfam PF01699 Sodium/calcium exchanger protein 207 346 3.6E-18 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BAMF_0763 7eeeba310da0273c96b6398a7326acdb 351 Gene3D G3DSA:1.20.1420.30 57 342 1.3E-27 T 12-10-2018 BAMF_0763 7eeeba310da0273c96b6398a7326acdb 351 TIGRFAM TIGR00378 cax: calcium/proton exchanger 12 349 4.7E-163 T 12-10-2018 IPR004798 Calcium/proton exchanger CAX GO:0006816|GO:0015369 BAMF_0763 7eeeba310da0273c96b6398a7326acdb 351 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 2 349 3.1E-131 T 12-10-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 BAMF_0763 7eeeba310da0273c96b6398a7326acdb 351 Gene3D G3DSA:1.20.58.1130 34 238 1.3E-27 T 12-10-2018 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 Gene3D G3DSA:2.70.150.20 191 303 2.7E-29 T 12-10-2018 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 SUPERFAMILY SSF81653 201 298 2.35E-21 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 Pfam PF00403 Heavy-metal-associated domain 10 66 2.6E-8 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 SUPERFAMILY SSF56784 400 695 4.73E-60 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 Pfam PF00702 haloacid dehalogenase-like hydrolase 399 608 6.3E-35 T 12-10-2018 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 149 699 1.4E-156 T 12-10-2018 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 150 697 1.1E-170 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 174 674 1.3E-72 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 PRINTS PR00941 Cadmium-transporting ATPase signature 19 40 6.1E-14 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 PRINTS PR00941 Cadmium-transporting ATPase signature 264 280 6.1E-14 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 PRINTS PR00941 Cadmium-transporting ATPase signature 183 203 6.1E-14 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 PRINTS PR00941 Cadmium-transporting ATPase signature 283 297 6.1E-14 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 PRINTS PR00941 Cadmium-transporting ATPase signature 8 17 6.1E-14 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 402 408 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 Pfam PF00122 E1-E2 ATPase 199 379 1.2E-44 T 12-10-2018 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 Gene3D G3DSA:3.40.50.1000 381 647 3.7E-82 T 12-10-2018 IPR023214 HAD superfamily BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 SUPERFAMILY SSF81665 143 693 2.35E-11 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 548 3.9E-22 T 12-10-2018 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 594 613 3.9E-22 T 12-10-2018 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 618 630 3.9E-22 T 12-10-2018 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 400 414 3.9E-22 T 12-10-2018 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 248 262 3.9E-22 T 12-10-2018 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 SUPERFAMILY SSF55008 6 74 2.09E-10 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 39 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 Gene3D G3DSA:3.30.70.100 5 89 4.5E-10 T 12-10-2018 BAMF_3197 9055c6049fd6955fd46b332d0771076c 703 Gene3D G3DSA:3.40.1110.10 411 522 3.7E-82 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BAMF_3474 3b0d41004ee61142d023ed9e8018fc42 285 Gene3D G3DSA:3.30.1240.10 81 210 3.3E-102 T 12-10-2018 BAMF_3474 3b0d41004ee61142d023ed9e8018fc42 285 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 281 2.0E-66 T 12-10-2018 BAMF_3474 3b0d41004ee61142d023ed9e8018fc42 285 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 254 1.0E-28 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BAMF_3474 3b0d41004ee61142d023ed9e8018fc42 285 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 3 281 1.3E-61 T 12-10-2018 IPR000150 Cof family GO:0016787 BAMF_3474 3b0d41004ee61142d023ed9e8018fc42 285 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 12-10-2018 BAMF_3474 3b0d41004ee61142d023ed9e8018fc42 285 SUPERFAMILY SSF56784 1 285 4.08E-67 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_3474 3b0d41004ee61142d023ed9e8018fc42 285 ProSitePatterns PS01229 Hypothetical cof family signature 2. 235 257 - T 12-10-2018 BAMF_3474 3b0d41004ee61142d023ed9e8018fc42 285 Gene3D G3DSA:3.40.50.1000 2 278 3.3E-102 T 12-10-2018 IPR023214 HAD superfamily BAMF_2033 660cc8d5341ae8181edb11ad122f8e01 241 Gene3D G3DSA:1.10.10.10 1 70 1.1E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2033 660cc8d5341ae8181edb11ad122f8e01 241 Pfam PF07702 UTRA domain 90 223 3.7E-26 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BAMF_2033 660cc8d5341ae8181edb11ad122f8e01 241 SMART SM00866 87 226 3.3E-27 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BAMF_2033 660cc8d5341ae8181edb11ad122f8e01 241 Gene3D G3DSA:3.40.1410.10 71 236 2.0E-39 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BAMF_2033 660cc8d5341ae8181edb11ad122f8e01 241 SUPERFAMILY SSF46785 5 75 2.17E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2033 660cc8d5341ae8181edb11ad122f8e01 241 SUPERFAMILY SSF64288 76 230 1.0E-38 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BAMF_2033 660cc8d5341ae8181edb11ad122f8e01 241 SMART SM00345 7 66 3.7E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_2033 660cc8d5341ae8181edb11ad122f8e01 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 2.6E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3005 8e19d50410e3d0f3b48b9a7a27ece44e 41 SUPERFAMILY SSF57938 7 38 1.57E-5 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily BAMF_3005 8e19d50410e3d0f3b48b9a7a27ece44e 41 ProDom PD049837 YUIA BH3406 1 39 2.0E-10 T 12-10-2018 IPR035272 Protein of unknown function DUF5351 BAMF_3005 8e19d50410e3d0f3b48b9a7a27ece44e 41 Pfam PF17302 Family of unknown function (DUF5351) 11 39 3.5E-18 T 12-10-2018 IPR035272 Protein of unknown function DUF5351 BAMF_3356 8b8aaef080e3e6ffe9afaee430a6a801 661 Pfam PF04851 Type III restriction enzyme, res subunit 12 130 9.1E-13 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BAMF_3356 8b8aaef080e3e6ffe9afaee430a6a801 661 SUPERFAMILY SSF52540 324 583 7.62E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3356 8b8aaef080e3e6ffe9afaee430a6a801 661 Gene3D G3DSA:3.40.50.300 414 595 1.4E-52 T 12-10-2018 BAMF_3356 8b8aaef080e3e6ffe9afaee430a6a801 661 Pfam PF12344 Ultra-violet resistance protein B 551 593 1.8E-20 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain BAMF_3356 8b8aaef080e3e6ffe9afaee430a6a801 661 SUPERFAMILY SSF46600 615 659 2.09E-10 T 12-10-2018 IPR036876 UVR domain superfamily BAMF_3356 8b8aaef080e3e6ffe9afaee430a6a801 661 SMART SM00490 459 545 9.5E-21 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_3356 8b8aaef080e3e6ffe9afaee430a6a801 661 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 660 45.233 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 BAMF_3356 8b8aaef080e3e6ffe9afaee430a6a801 661 Gene3D G3DSA:3.40.50.300 1 240 7.8E-85 T 12-10-2018 BAMF_3356 8b8aaef080e3e6ffe9afaee430a6a801 661 Gene3D G3DSA:3.40.50.300 273 413 4.8E-54 T 12-10-2018 BAMF_3356 8b8aaef080e3e6ffe9afaee430a6a801 661 SMART SM00487 9 425 3.1E-27 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_3356 8b8aaef080e3e6ffe9afaee430a6a801 661 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 658 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 BAMF_3356 8b8aaef080e3e6ffe9afaee430a6a801 661 SUPERFAMILY SSF52540 3 414 6.87E-144 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3356 8b8aaef080e3e6ffe9afaee430a6a801 661 Pfam PF00271 Helicase conserved C-terminal domain 440 544 5.5E-19 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_3356 8b8aaef080e3e6ffe9afaee430a6a801 661 Pfam PF02151 UvrB/uvrC motif 626 659 4.2E-9 T 12-10-2018 IPR001943 UVR domain GO:0005515 BAMF_0530 5fe5ef7be6bd93cd3de5746cc17585cb 151 Gene3D G3DSA:3.40.630.30 5 151 1.5E-43 T 12-10-2018 BAMF_0530 5fe5ef7be6bd93cd3de5746cc17585cb 151 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 14 145 4.5E-43 T 12-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 BAMF_0530 5fe5ef7be6bd93cd3de5746cc17585cb 151 SUPERFAMILY SSF55729 7 149 9.31E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_0530 5fe5ef7be6bd93cd3de5746cc17585cb 151 Pfam PF00583 Acetyltransferase (GNAT) family 15 124 3.7E-21 T 12-10-2018 IPR000182 GNAT domain BAMF_1249 5be6ad2add505f4331efe05d7a366e28 160 Pfam PF10612 Spore coat protein Z 1 143 3.7E-39 T 12-10-2018 IPR019593 Spore coat protein Z/Y BAMF_0961 e0e4a53e24ff206304a71675504d36d9 312 Gene3D G3DSA:3.10.350.10 175 238 1.9E-17 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_0961 e0e4a53e24ff206304a71675504d36d9 312 SUPERFAMILY SSF55846 8 158 6.62E-45 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_0961 e0e4a53e24ff206304a71675504d36d9 312 Gene3D G3DSA:3.40.80.10 4 166 6.6E-48 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_0961 e0e4a53e24ff206304a71675504d36d9 312 Pfam PF01476 LysM domain 182 224 1.9E-14 T 12-10-2018 IPR018392 LysM domain BAMF_0961 e0e4a53e24ff206304a71675504d36d9 312 SUPERFAMILY SSF54106 181 224 8.63E-11 T 12-10-2018 BAMF_0961 e0e4a53e24ff206304a71675504d36d9 312 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 24 143 1.6E-17 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_0961 e0e4a53e24ff206304a71675504d36d9 312 SMART SM00257 181 225 4.4E-17 T 12-10-2018 IPR018392 LysM domain BAMF_0961 e0e4a53e24ff206304a71675504d36d9 312 SMART SM00644 15 149 2.2E-31 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_0629 bc2bb2446c0da264922386c1ee28508b 177 SUPERFAMILY SSF88946 3 90 1.73E-21 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_0629 bc2bb2446c0da264922386c1ee28508b 177 Gene3D G3DSA:1.10.10.10 104 171 8.7E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0629 bc2bb2446c0da264922386c1ee28508b 177 Gene3D G3DSA:1.10.1740.10 1 100 1.6E-22 T 12-10-2018 BAMF_0629 bc2bb2446c0da264922386c1ee28508b 177 Pfam PF04542 Sigma-70 region 2 21 83 1.7E-8 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_0629 bc2bb2446c0da264922386c1ee28508b 177 Pfam PF08281 Sigma-70, region 4 110 161 4.7E-13 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_0629 bc2bb2446c0da264922386c1ee28508b 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 165 1.3E-24 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_0629 bc2bb2446c0da264922386c1ee28508b 177 SUPERFAMILY SSF88659 107 167 1.03E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_0122 c1f910591b92bdc63982b5cae04386f7 218 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0122 c1f910591b92bdc63982b5cae04386f7 218 SMART SM00322 59 124 9.9E-9 T 12-10-2018 IPR004087 K Homology domain GO:0003676 BAMF_0122 c1f910591b92bdc63982b5cae04386f7 218 Gene3D G3DSA:3.30.1140.32 107 207 3.2E-40 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0122 c1f910591b92bdc63982b5cae04386f7 218 Pfam PF07650 KH domain 37 109 1.7E-21 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0122 c1f910591b92bdc63982b5cae04386f7 218 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 6.7E-39 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0122 c1f910591b92bdc63982b5cae04386f7 218 SUPERFAMILY SSF54821 107 205 2.09E-37 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0122 c1f910591b92bdc63982b5cae04386f7 218 SUPERFAMILY SSF54814 2 105 3.92E-39 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BAMF_0122 c1f910591b92bdc63982b5cae04386f7 218 Gene3D G3DSA:3.30.300.20 17 106 4.9E-33 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BAMF_0122 c1f910591b92bdc63982b5cae04386f7 218 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.4E-96 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BAMF_0122 c1f910591b92bdc63982b5cae04386f7 218 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.263 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BAMF_3160 e9df0b8ffbe2f5a58b25ea2e4725c23f 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_3160 e9df0b8ffbe2f5a58b25ea2e4725c23f 263 SUPERFAMILY SSF51735 7 259 1.39E-70 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3160 e9df0b8ffbe2f5a58b25ea2e4725c23f 263 Gene3D G3DSA:3.40.50.720 1 262 3.5E-73 T 12-10-2018 BAMF_3160 e9df0b8ffbe2f5a58b25ea2e4725c23f 263 Pfam PF00106 short chain dehydrogenase 8 195 2.6E-52 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3160 e9df0b8ffbe2f5a58b25ea2e4725c23f 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.3E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3160 e9df0b8ffbe2f5a58b25ea2e4725c23f 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.3E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3160 e9df0b8ffbe2f5a58b25ea2e4725c23f 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.3E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3160 e9df0b8ffbe2f5a58b25ea2e4725c23f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.2E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3160 e9df0b8ffbe2f5a58b25ea2e4725c23f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.2E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3160 e9df0b8ffbe2f5a58b25ea2e4725c23f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.2E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3160 e9df0b8ffbe2f5a58b25ea2e4725c23f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.2E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3160 e9df0b8ffbe2f5a58b25ea2e4725c23f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.2E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3160 e9df0b8ffbe2f5a58b25ea2e4725c23f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.2E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2048 592df2d7b08b201b9aa5b45d66cfdd2c 473 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 23 427 3.8E-189 T 12-10-2018 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 BAMF_2048 592df2d7b08b201b9aa5b45d66cfdd2c 473 SUPERFAMILY SSF102114 114 359 1.96E-33 T 12-10-2018 BAMF_2048 592df2d7b08b201b9aa5b45d66cfdd2c 473 Gene3D G3DSA:2.40.50.600 349 414 1.0E-17 T 12-10-2018 BAMF_2048 592df2d7b08b201b9aa5b45d66cfdd2c 473 Gene3D G3DSA:3.20.20.70 63 348 4.7E-117 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_2048 592df2d7b08b201b9aa5b45d66cfdd2c 473 Pfam PF12544 Lysine-2,3-aminomutase 321 447 2.6E-60 T 12-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain BAMF_2048 592df2d7b08b201b9aa5b45d66cfdd2c 473 PIRSF PIRSF004911 2 399 3.5E-158 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BAMF_2048 592df2d7b08b201b9aa5b45d66cfdd2c 473 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 342 1.4E-152 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BAMF_1210 db97d1274213d9f9064aa0f04f2a67dc 329 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_1210 db97d1274213d9f9064aa0f04f2a67dc 329 Pfam PF00005 ABC transporter 37 188 1.4E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1210 db97d1274213d9f9064aa0f04f2a67dc 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 327 1.6E-27 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BAMF_1210 db97d1274213d9f9064aa0f04f2a67dc 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 307 1.2E-18 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BAMF_1210 db97d1274213d9f9064aa0f04f2a67dc 329 SMART SM00382 45 238 9.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1210 db97d1274213d9f9064aa0f04f2a67dc 329 Gene3D G3DSA:3.40.50.300 7 329 1.6E-102 T 12-10-2018 BAMF_1210 db97d1274213d9f9064aa0f04f2a67dc 329 SUPERFAMILY SSF52540 9 260 1.52E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0585 7e69aa8ba45a510abcfab2e0066699c1 98 Gene3D G3DSA:1.10.246.150 4 98 1.1E-39 T 12-10-2018 BAMF_0585 7e69aa8ba45a510abcfab2e0066699c1 98 Pfam PF05135 Phage gp6-like head-tail connector protein 1 94 3.4E-8 T 12-10-2018 IPR021146 Phage gp6-like head-tail connector protein BAMF_3727 f39483de6f655a0ffe1d21de3931f0e9 224 Pfam PF13739 Domain of unknown function (DUF4163) 47 128 5.0E-19 T 12-10-2018 IPR025303 Deacetylase PdaC BAMF_3727 f39483de6f655a0ffe1d21de3931f0e9 224 Gene3D G3DSA:3.90.640.20 144 224 3.9E-11 T 12-10-2018 IPR037126 PdaC/RsiV-like superfamily BAMF_3727 f39483de6f655a0ffe1d21de3931f0e9 224 Gene3D G3DSA:3.30.565.40 33 142 5.4E-24 T 12-10-2018 BAMF_3727 f39483de6f655a0ffe1d21de3931f0e9 224 Pfam PF11738 Protein of unknown function (DUF3298) 171 221 3.9E-7 T 12-10-2018 IPR021729 Domain of unknown function DUF3298 BAMF_2710 2b4d73b8cf4b5181882f0e11ded0222e 210 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 4 210 1.0E-79 T 12-10-2018 IPR014205 Sporulation protein YtaF BAMF_2710 2b4d73b8cf4b5181882f0e11ded0222e 210 Pfam PF02659 Putative manganese efflux pump 3 81 9.2E-13 T 12-10-2018 IPR003810 Putative manganese efflux pump BAMF_2710 2b4d73b8cf4b5181882f0e11ded0222e 210 Pfam PF02659 Putative manganese efflux pump 123 208 2.4E-11 T 12-10-2018 IPR003810 Putative manganese efflux pump BAMF_2675 39c20526cd5dfe3c503e45f1b772494e 442 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 78 89 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BAMF_2675 39c20526cd5dfe3c503e45f1b772494e 442 SUPERFAMILY SSF46548 5 107 6.02E-19 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BAMF_2675 39c20526cd5dfe3c503e45f1b772494e 442 Pfam PF02754 Cysteine-rich domain 199 280 5.3E-20 T 12-10-2018 IPR004017 Cysteine-rich domain BAMF_2675 39c20526cd5dfe3c503e45f1b772494e 442 Pfam PF02754 Cysteine-rich domain 329 414 9.2E-18 T 12-10-2018 IPR004017 Cysteine-rich domain BAMF_2675 39c20526cd5dfe3c503e45f1b772494e 442 Gene3D G3DSA:1.10.1060.10 1 114 2.8E-8 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BAMF_2675 39c20526cd5dfe3c503e45f1b772494e 442 PIRSF PIRSF000139 6 440 3.0E-138 T 12-10-2018 BAMF_2675 39c20526cd5dfe3c503e45f1b772494e 442 Pfam PF13183 4Fe-4S dicluster domain 23 92 1.0E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BAMF_1727 4d730b21c22d999bd6a9f9314a112ed5 383 SUPERFAMILY SSF51735 2 148 3.94E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1727 4d730b21c22d999bd6a9f9314a112ed5 383 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 381 46.369 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BAMF_1727 4d730b21c22d999bd6a9f9314a112ed5 383 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 144 227 6.3E-42 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BAMF_1727 4d730b21c22d999bd6a9f9314a112ed5 383 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 378 2.9E-178 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BAMF_1727 4d730b21c22d999bd6a9f9314a112ed5 383 Gene3D G3DSA:1.10.1740.10 301 383 2.5E-27 T 12-10-2018 BAMF_1727 4d730b21c22d999bd6a9f9314a112ed5 383 SUPERFAMILY SSF55347 125 262 4.58E-60 T 12-10-2018 BAMF_1727 4d730b21c22d999bd6a9f9314a112ed5 383 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 130 4.8E-43 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BAMF_1727 4d730b21c22d999bd6a9f9314a112ed5 383 SUPERFAMILY SSF69055 290 381 6.02E-30 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BAMF_1727 4d730b21c22d999bd6a9f9314a112ed5 383 Pfam PF13288 DXP reductoisomerase C-terminal domain 259 375 1.1E-41 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BAMF_1727 4d730b21c22d999bd6a9f9314a112ed5 383 PIRSF PIRSF006205 1 383 1.9E-161 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BAMF_1727 4d730b21c22d999bd6a9f9314a112ed5 383 Gene3D G3DSA:3.40.50.720 1 148 8.3E-48 T 12-10-2018 BAMF_0091 cb3f48da2f2b8c4ab24c7a22ce6ad1bb 483 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_0091 cb3f48da2f2b8c4ab24c7a22ce6ad1bb 483 SUPERFAMILY SSF52374 5 316 2.01E-114 T 12-10-2018 BAMF_0091 cb3f48da2f2b8c4ab24c7a22ce6ad1bb 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 9.6E-30 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BAMF_0091 cb3f48da2f2b8c4ab24c7a22ce6ad1bb 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 9.6E-30 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BAMF_0091 cb3f48da2f2b8c4ab24c7a22ce6ad1bb 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 9.6E-30 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BAMF_0091 cb3f48da2f2b8c4ab24c7a22ce6ad1bb 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 9.6E-30 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BAMF_0091 cb3f48da2f2b8c4ab24c7a22ce6ad1bb 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 9.6E-30 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BAMF_0091 cb3f48da2f2b8c4ab24c7a22ce6ad1bb 483 SUPERFAMILY SSF48163 298 482 8.24E-50 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BAMF_0091 cb3f48da2f2b8c4ab24c7a22ce6ad1bb 483 Gene3D G3DSA:1.10.10.350 390 483 9.3E-35 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BAMF_0091 cb3f48da2f2b8c4ab24c7a22ce6ad1bb 483 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 323 7.4E-129 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BAMF_0091 cb3f48da2f2b8c4ab24c7a22ce6ad1bb 483 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 481 3.7E-207 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BAMF_0091 cb3f48da2f2b8c4ab24c7a22ce6ad1bb 483 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 483 34.221 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BAMF_0091 cb3f48da2f2b8c4ab24c7a22ce6ad1bb 483 Gene3D G3DSA:3.40.50.620 1 331 9.1E-144 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_1806 0fe1f7270a300ec4ac68c1465eca10b5 130 Hamap MF_00128 Protein NrdI [nrdI]. 2 122 26.515 T 12-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial BAMF_1806 0fe1f7270a300ec4ac68c1465eca10b5 130 TIGRFAM TIGR00333 nrdI: nrdI protein 4 124 1.4E-45 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI BAMF_1806 0fe1f7270a300ec4ac68c1465eca10b5 130 SUPERFAMILY SSF52218 2 121 1.37E-23 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_1806 0fe1f7270a300ec4ac68c1465eca10b5 130 Pfam PF07972 NrdI Flavodoxin like 4 112 1.5E-31 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI BAMF_1806 0fe1f7270a300ec4ac68c1465eca10b5 130 Gene3D G3DSA:3.40.50.360 1 130 2.9E-45 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_1806 0fe1f7270a300ec4ac68c1465eca10b5 130 PIRSF PIRSF005087 1 126 1.7E-39 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI BAMF_2038 1d5c1281c9b76b817a6178ff9805dc8b 240 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 12 240 1.2E-113 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BAMF_2038 1d5c1281c9b76b817a6178ff9805dc8b 240 Pfam PF01048 Phosphorylase superfamily 23 226 8.2E-41 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BAMF_2038 1d5c1281c9b76b817a6178ff9805dc8b 240 Gene3D G3DSA:3.40.50.1580 2 240 6.6E-74 T 12-10-2018 BAMF_2038 1d5c1281c9b76b817a6178ff9805dc8b 240 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 69 84 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_2038 1d5c1281c9b76b817a6178ff9805dc8b 240 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 9 240 45.244 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BAMF_2038 1d5c1281c9b76b817a6178ff9805dc8b 240 SUPERFAMILY SSF53167 10 239 9.95E-90 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BAMF_3845 cb6a6c502e708de3dbf1c897b084ecea 413 SUPERFAMILY SSF53383 17 411 1.22E-122 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_3845 cb6a6c502e708de3dbf1c897b084ecea 413 Pfam PF00202 Aminotransferase class-III 30 410 1.6E-135 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_3845 cb6a6c502e708de3dbf1c897b084ecea 413 PIRSF PIRSF000521 189 413 1.3E-31 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_3845 cb6a6c502e708de3dbf1c897b084ecea 413 PIRSF PIRSF000521 5 174 1.2E-8 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_3845 cb6a6c502e708de3dbf1c897b084ecea 413 Hamap MF_01689 Ornithine aminotransferase [rocD]. 19 411 65.554 T 12-10-2018 IPR034757 Ornithine aminotransferase, bacterial type GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922 BAMF_3845 cb6a6c502e708de3dbf1c897b084ecea 413 Gene3D G3DSA:3.40.640.10 73 321 2.7E-149 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_3845 cb6a6c502e708de3dbf1c897b084ecea 413 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 19 410 1.0E-162 T 12-10-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BAMF_3845 cb6a6c502e708de3dbf1c897b084ecea 413 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 238 275 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_3845 cb6a6c502e708de3dbf1c897b084ecea 413 Gene3D G3DSA:3.90.1150.10 38 400 2.7E-149 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_2825 45ab5547cec194b71524684c8768095b 336 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 163 177 3.0E-32 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BAMF_2825 45ab5547cec194b71524684c8768095b 336 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 103 117 3.0E-32 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BAMF_2825 45ab5547cec194b71524684c8768095b 336 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 268 287 3.0E-32 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BAMF_2825 45ab5547cec194b71524684c8768095b 336 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 180 192 3.0E-32 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BAMF_2825 45ab5547cec194b71524684c8768095b 336 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 248 262 3.0E-32 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BAMF_2360 bf46b748dc315a718a93c6f0fd3bd12d 366 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 362 1.9E-160 T 12-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 BAMF_2360 bf46b748dc315a718a93c6f0fd3bd12d 366 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 356 1.7E-27 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 BAMF_2360 bf46b748dc315a718a93c6f0fd3bd12d 366 Gene3D G3DSA:3.30.1360.120 4 235 7.9E-94 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 BAMF_2360 bf46b748dc315a718a93c6f0fd3bd12d 366 Gene3D G3DSA:3.30.70.1400 51 136 7.9E-94 T 12-10-2018 BAMF_2360 bf46b748dc315a718a93c6f0fd3bd12d 366 Gene3D G3DSA:4.10.1250.10 237 279 3.1E-16 T 12-10-2018 BAMF_2360 bf46b748dc315a718a93c6f0fd3bd12d 366 Gene3D G3DSA:2.40.30.110 280 362 5.6E-34 T 12-10-2018 BAMF_2360 bf46b748dc315a718a93c6f0fd3bd12d 366 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 362 48.17 T 12-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 BAMF_2360 bf46b748dc315a718a93c6f0fd3bd12d 366 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 258 7.1E-96 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain BAMF_2360 bf46b748dc315a718a93c6f0fd3bd12d 366 SUPERFAMILY SSF103025 2 281 1.35E-100 T 12-10-2018 BAMF_2360 bf46b748dc315a718a93c6f0fd3bd12d 366 PIRSF PIRSF006487 1 366 2.8E-106 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 BAMF_2360 bf46b748dc315a718a93c6f0fd3bd12d 366 SUPERFAMILY SSF101790 273 362 4.74E-27 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BAMF_0624 9efe21878c233574ccc4767317c707f2 275 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 274 8.2E-72 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BAMF_0624 9efe21878c233574ccc4767317c707f2 275 Pfam PF01545 Cation efflux family 15 206 1.7E-51 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BAMF_0624 9efe21878c233574ccc4767317c707f2 275 Gene3D G3DSA:1.20.1510.10 11 207 1.3E-54 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BAMF_0624 9efe21878c233574ccc4767317c707f2 275 Pfam PF16916 Dimerisation domain of Zinc Transporter 215 274 7.6E-14 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain BAMF_0624 9efe21878c233574ccc4767317c707f2 275 SUPERFAMILY SSF161111 8 208 1.7E-53 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BAMF_0624 9efe21878c233574ccc4767317c707f2 275 Gene3D G3DSA:3.30.70.1350 213 275 4.3E-13 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BAMF_0624 9efe21878c233574ccc4767317c707f2 275 SUPERFAMILY SSF160240 213 273 5.62E-13 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BAMF_0320 a8a4d28169282e23f49d2f66e06efe2d 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 229 1.2E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_0320 a8a4d28169282e23f49d2f66e06efe2d 234 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 122 1.3E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BAMF_0320 a8a4d28169282e23f49d2f66e06efe2d 234 SUPERFAMILY SSF161098 25 230 2.22E-46 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_0320 a8a4d28169282e23f49d2f66e06efe2d 234 Gene3D G3DSA:1.10.3720.10 19 231 2.9E-52 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1959 e7952c828376846f9363fd74082314ff 497 Pfam PF13091 PLD-like domain 115 255 3.8E-9 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BAMF_1959 e7952c828376846f9363fd74082314ff 497 Pfam PF13091 PLD-like domain 340 464 4.1E-31 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BAMF_1959 e7952c828376846f9363fd74082314ff 497 SUPERFAMILY SSF56024 316 481 3.36E-42 T 12-10-2018 BAMF_1959 e7952c828376846f9363fd74082314ff 497 SUPERFAMILY SSF56024 97 265 3.59E-38 T 12-10-2018 BAMF_1959 e7952c828376846f9363fd74082314ff 497 SMART SM00155 195 222 2.3 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BAMF_1959 e7952c828376846f9363fd74082314ff 497 SMART SM00155 410 437 3.2E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BAMF_1959 e7952c828376846f9363fd74082314ff 497 Gene3D G3DSA:3.30.870.10 96 288 1.2E-36 T 12-10-2018 BAMF_1959 e7952c828376846f9363fd74082314ff 497 Gene3D G3DSA:3.30.870.10 328 468 5.0E-30 T 12-10-2018 BAMF_1845 e7952c828376846f9363fd74082314ff 497 Pfam PF13091 PLD-like domain 115 255 3.8E-9 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BAMF_1845 e7952c828376846f9363fd74082314ff 497 Pfam PF13091 PLD-like domain 340 464 4.1E-31 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BAMF_1845 e7952c828376846f9363fd74082314ff 497 SUPERFAMILY SSF56024 316 481 3.36E-42 T 12-10-2018 BAMF_1845 e7952c828376846f9363fd74082314ff 497 SUPERFAMILY SSF56024 97 265 3.59E-38 T 12-10-2018 BAMF_1845 e7952c828376846f9363fd74082314ff 497 SMART SM00155 195 222 2.3 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BAMF_1845 e7952c828376846f9363fd74082314ff 497 SMART SM00155 410 437 3.2E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BAMF_1845 e7952c828376846f9363fd74082314ff 497 Gene3D G3DSA:3.30.870.10 96 288 1.2E-36 T 12-10-2018 BAMF_1845 e7952c828376846f9363fd74082314ff 497 Gene3D G3DSA:3.30.870.10 328 468 5.0E-30 T 12-10-2018 BAMF_3824 e7952c828376846f9363fd74082314ff 497 Pfam PF13091 PLD-like domain 115 255 3.8E-9 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BAMF_3824 e7952c828376846f9363fd74082314ff 497 Pfam PF13091 PLD-like domain 340 464 4.1E-31 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BAMF_3824 e7952c828376846f9363fd74082314ff 497 SUPERFAMILY SSF56024 316 481 3.36E-42 T 12-10-2018 BAMF_3824 e7952c828376846f9363fd74082314ff 497 SUPERFAMILY SSF56024 97 265 3.59E-38 T 12-10-2018 BAMF_3824 e7952c828376846f9363fd74082314ff 497 SMART SM00155 195 222 2.3 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BAMF_3824 e7952c828376846f9363fd74082314ff 497 SMART SM00155 410 437 3.2E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BAMF_3824 e7952c828376846f9363fd74082314ff 497 Gene3D G3DSA:3.30.870.10 96 288 1.2E-36 T 12-10-2018 BAMF_3824 e7952c828376846f9363fd74082314ff 497 Gene3D G3DSA:3.30.870.10 328 468 5.0E-30 T 12-10-2018 BAMF_3052 30c397e153c7ada46f02563457a5a6c4 284 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 221 234 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BAMF_3052 30c397e153c7ada46f02563457a5a6c4 284 SUPERFAMILY SSF53613 1 264 1.53E-50 T 12-10-2018 IPR029056 Ribokinase-like BAMF_3052 30c397e153c7ada46f02563457a5a6c4 284 Gene3D G3DSA:3.40.1190.20 1 266 8.3E-49 T 12-10-2018 IPR029056 Ribokinase-like BAMF_3052 30c397e153c7ada46f02563457a5a6c4 284 Pfam PF00294 pfkB family carbohydrate kinase 10 263 2.3E-35 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB BAMF_2306 02dac037b8f6fa531fc1ca2d3478eaba 297 Gene3D G3DSA:3.40.718.10 2 295 2.2E-101 T 12-10-2018 BAMF_2306 02dac037b8f6fa531fc1ca2d3478eaba 297 Pfam PF01515 Phosphate acetyl/butaryl transferase 75 291 2.5E-45 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BAMF_2306 02dac037b8f6fa531fc1ca2d3478eaba 297 PIRSF PIRSF000428 1 297 2.8E-81 T 12-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BAMF_2306 02dac037b8f6fa531fc1ca2d3478eaba 297 SUPERFAMILY SSF53659 2 294 6.99E-59 T 12-10-2018 BAMF_2306 02dac037b8f6fa531fc1ca2d3478eaba 297 TIGRFAM TIGR02706 P_butyryltrans: phosphate butyryltransferase 4 294 1.3E-127 T 12-10-2018 IPR014079 Phosphate butyryltransferase GO:0016740|GO:0019605|GO:0050182 KEGG: 00650+2.3.1.19 BAMF_3797 783484b2cc76706f17494ac40512fbd6 385 SUPERFAMILY SSF46689 201 269 8.48E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_3797 783484b2cc76706f17494ac40512fbd6 385 Gene3D G3DSA:1.10.357.10 200 374 2.2E-25 T 12-10-2018 BAMF_3797 783484b2cc76706f17494ac40512fbd6 385 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 54 2.5E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_3797 783484b2cc76706f17494ac40512fbd6 385 Pfam PF00440 Bacterial regulatory proteins, tetR family 221 256 1.5E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_3797 783484b2cc76706f17494ac40512fbd6 385 Gene3D G3DSA:1.10.357.10 5 186 6.3E-28 T 12-10-2018 BAMF_3797 783484b2cc76706f17494ac40512fbd6 385 SUPERFAMILY SSF46689 8 70 3.54E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_1320 38b08a1720612f0d76518b419862a60c 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.0E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_1320 38b08a1720612f0d76518b419862a60c 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.0E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_1320 38b08a1720612f0d76518b419862a60c 332 Gene3D G3DSA:3.40.50.2300 60 307 7.6E-67 T 12-10-2018 BAMF_1320 38b08a1720612f0d76518b419862a60c 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.7E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_1320 38b08a1720612f0d76518b419862a60c 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 BAMF_1320 38b08a1720612f0d76518b419862a60c 332 Gene3D G3DSA:3.40.50.2300 159 288 7.6E-67 T 12-10-2018 BAMF_1320 38b08a1720612f0d76518b419862a60c 332 SUPERFAMILY SSF53822 61 329 1.2E-70 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BAMF_1320 38b08a1720612f0d76518b419862a60c 332 SMART SM00354 1 71 2.9E-31 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_1320 38b08a1720612f0d76518b419862a60c 332 SUPERFAMILY SSF47413 1 59 1.23E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_1320 38b08a1720612f0d76518b419862a60c 332 Gene3D G3DSA:1.10.260.40 3 59 5.2E-22 T 12-10-2018 BAMF_1320 38b08a1720612f0d76518b419862a60c 332 Pfam PF13377 Periplasmic binding protein-like domain 168 327 3.1E-34 T 12-10-2018 BAMF_3653 875a2742b7eff8593fd5999e3ed4efb3 318 Gene3D G3DSA:2.60.40.420 114 275 5.1E-41 T 12-10-2018 IPR008972 Cupredoxin BAMF_3653 875a2742b7eff8593fd5999e3ed4efb3 318 TIGRFAM TIGR01432 QOXA: cytochrome aa3 quinol oxidase, subunit II 11 239 1.4E-132 T 12-10-2018 IPR006332 Quinol oxidase subunit II GO:0009486|GO:0016021|GO:0016682|GO:0055114 BAMF_3653 875a2742b7eff8593fd5999e3ed4efb3 318 PIRSF PIRSF000292 2 309 2.3E-111 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 BAMF_3653 875a2742b7eff8593fd5999e3ed4efb3 318 SUPERFAMILY SSF49503 124 276 1.83E-41 T 12-10-2018 IPR008972 Cupredoxin BAMF_3653 875a2742b7eff8593fd5999e3ed4efb3 318 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 37 109 2.6E-10 T 12-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3653 875a2742b7eff8593fd5999e3ed4efb3 318 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 148 225 5.5E-5 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3653 875a2742b7eff8593fd5999e3ed4efb3 318 SUPERFAMILY SSF81464 17 117 1.05E-23 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3653 875a2742b7eff8593fd5999e3ed4efb3 318 Gene3D G3DSA:1.10.287.90 26 113 2.4E-30 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_2220 7e78b6dfc7a5bbc8deef5bf8864e50de 197 SUPERFAMILY SSF46785 3 83 3.89E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2220 7e78b6dfc7a5bbc8deef5bf8864e50de 197 Gene3D G3DSA:1.10.10.10 86 181 3.9E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2220 7e78b6dfc7a5bbc8deef5bf8864e50de 197 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 7 195 1.7E-74 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 BAMF_2220 7e78b6dfc7a5bbc8deef5bf8864e50de 197 SUPERFAMILY SSF46785 87 160 2.01E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2220 7e78b6dfc7a5bbc8deef5bf8864e50de 197 Gene3D G3DSA:1.10.10.10 3 85 1.5E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2220 7e78b6dfc7a5bbc8deef5bf8864e50de 197 Hamap MF_01804 Segregation and condensation protein B [scpB]. 6 185 34.3 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 BAMF_2220 7e78b6dfc7a5bbc8deef5bf8864e50de 197 PIRSF PIRSF019345 2 195 2.3E-55 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 BAMF_2220 7e78b6dfc7a5bbc8deef5bf8864e50de 197 Pfam PF04079 Segregation and condensation complex subunit ScpB 10 169 2.8E-52 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 BAMF_0337 c2f87022b4109a698e0f3a08a9fe571c 249 Gene3D G3DSA:3.40.50.300 1 248 1.5E-77 T 12-10-2018 BAMF_0337 c2f87022b4109a698e0f3a08a9fe571c 249 PIRSF PIRSF039085 1 244 6.7E-103 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BAMF_0337 c2f87022b4109a698e0f3a08a9fe571c 249 SMART SM00382 26 216 5.3E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0337 c2f87022b4109a698e0f3a08a9fe571c 249 Pfam PF00005 ABC transporter 17 168 1.5E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0337 c2f87022b4109a698e0f3a08a9fe571c 249 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0337 c2f87022b4109a698e0f3a08a9fe571c 249 SUPERFAMILY SSF52540 1 238 7.1E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2620 4047b8627d16a401174194a35512da31 325 Pfam PF00490 Delta-aminolevulinic acid dehydratase 7 322 1.1E-150 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BAMF_2620 4047b8627d16a401174194a35512da31 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 190 209 6.9E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BAMF_2620 4047b8627d16a401174194a35512da31 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 242 258 6.9E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BAMF_2620 4047b8627d16a401174194a35512da31 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 6.9E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BAMF_2620 4047b8627d16a401174194a35512da31 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 267 282 6.9E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BAMF_2620 4047b8627d16a401174194a35512da31 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 152 171 6.9E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BAMF_2620 4047b8627d16a401174194a35512da31 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 297 316 6.9E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BAMF_2620 4047b8627d16a401174194a35512da31 325 Gene3D G3DSA:3.20.20.70 1 324 2.8E-150 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_2620 4047b8627d16a401174194a35512da31 325 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 242 254 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BAMF_2620 4047b8627d16a401174194a35512da31 325 SUPERFAMILY SSF51569 3 324 3.3E-143 T 12-10-2018 BAMF_2620 4047b8627d16a401174194a35512da31 325 PIRSF PIRSF001415 1 325 6.8E-154 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BAMF_2620 4047b8627d16a401174194a35512da31 325 SMART SM01004 4 323 2.7E-237 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BAMF_1875 bac8ce0c07925cd396dd968c387cb6bd 667 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BAMF_1875 bac8ce0c07925cd396dd968c387cb6bd 667 Pfam PF02780 Transketolase, C-terminal domain 549 657 9.2E-12 T 12-10-2018 IPR033248 Transketolase, C-terminal domain BAMF_1875 bac8ce0c07925cd396dd968c387cb6bd 667 Gene3D G3DSA:3.40.50.970 3 330 2.9E-126 T 12-10-2018 BAMF_1875 bac8ce0c07925cd396dd968c387cb6bd 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 666 0.0 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 BAMF_1875 bac8ce0c07925cd396dd968c387cb6bd 667 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 5.8E-45 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BAMF_1875 bac8ce0c07925cd396dd968c387cb6bd 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 338 1.7E-154 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BAMF_1875 bac8ce0c07925cd396dd968c387cb6bd 667 ProSitePatterns PS00801 Transketolase signature 1. 13 33 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BAMF_1875 bac8ce0c07925cd396dd968c387cb6bd 667 SUPERFAMILY SSF52518 341 527 3.05E-69 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_1875 bac8ce0c07925cd396dd968c387cb6bd 667 SMART SM00861 354 525 3.7E-72 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BAMF_1875 bac8ce0c07925cd396dd968c387cb6bd 667 SUPERFAMILY SSF52922 531 667 1.05E-40 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BAMF_1875 bac8ce0c07925cd396dd968c387cb6bd 667 Gene3D G3DSA:3.40.50.970 331 537 2.6E-80 T 12-10-2018 BAMF_1875 bac8ce0c07925cd396dd968c387cb6bd 667 SUPERFAMILY SSF52518 4 325 5.89E-118 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_1875 bac8ce0c07925cd396dd968c387cb6bd 667 Gene3D G3DSA:3.40.50.920 540 667 2.6E-42 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BAMF_0788 998f26d3bf2189e8516cbc682f18a8e2 253 Gene3D G3DSA:3.40.50.10490 81 252 3.4E-25 T 12-10-2018 BAMF_0788 998f26d3bf2189e8516cbc682f18a8e2 253 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.0E-28 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BAMF_0788 998f26d3bf2189e8516cbc682f18a8e2 253 Gene3D G3DSA:1.10.10.10 2 75 8.7E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0788 998f26d3bf2189e8516cbc682f18a8e2 253 SUPERFAMILY SSF53697 84 243 2.43E-22 T 12-10-2018 BAMF_0788 998f26d3bf2189e8516cbc682f18a8e2 253 SUPERFAMILY SSF46689 1 73 5.2E-20 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_0788 998f26d3bf2189e8516cbc682f18a8e2 253 Pfam PF01380 SIS domain 110 218 1.4E-17 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BAMF_2921 e266e7e26849d13fc7ece4994a9b58b7 657 SMART SM00283 380 655 3.5E-94 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_2921 e266e7e26849d13fc7ece4994a9b58b7 657 Gene3D G3DSA:3.30.450.20 68 179 8.7E-31 T 12-10-2018 BAMF_2921 e266e7e26849d13fc7ece4994a9b58b7 657 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 425 608 5.9E-60 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_2921 e266e7e26849d13fc7ece4994a9b58b7 657 Gene3D G3DSA:3.30.450.20 55 260 8.7E-31 T 12-10-2018 BAMF_2921 e266e7e26849d13fc7ece4994a9b58b7 657 Gene3D G3DSA:1.10.287.950 355 655 3.5E-71 T 12-10-2018 BAMF_2921 e266e7e26849d13fc7ece4994a9b58b7 657 SMART SM00319 29 147 2.8E-29 T 12-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 BAMF_2921 e266e7e26849d13fc7ece4994a9b58b7 657 SMART SM00304 299 351 3.6E-16 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_2921 e266e7e26849d13fc7ece4994a9b58b7 657 SUPERFAMILY SSF103190 86 187 8.63E-10 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BAMF_2921 e266e7e26849d13fc7ece4994a9b58b7 657 Gene3D G3DSA:1.20.1480.50 269 354 1.6E-16 T 12-10-2018 BAMF_2921 e266e7e26849d13fc7ece4994a9b58b7 657 Pfam PF02743 Cache domain 39 259 1.0E-27 T 12-10-2018 IPR033479 Double Cache domain 1 BAMF_2921 e266e7e26849d13fc7ece4994a9b58b7 657 SUPERFAMILY SSF58104 319 655 4.71E-73 T 12-10-2018 BAMF_2921 e266e7e26849d13fc7ece4994a9b58b7 657 Pfam PF00672 HAMP domain 299 347 2.7E-14 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_3265 5dbc5c6b10e8f00c5a5e82fa56fddade 514 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BAMF_3265 5dbc5c6b10e8f00c5a5e82fa56fddade 514 PIRSF PIRSF000538 4 506 1.4E-148 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BAMF_3265 5dbc5c6b10e8f00c5a5e82fa56fddade 514 SUPERFAMILY SSF53067 7 253 2.89E-69 T 12-10-2018 BAMF_3265 5dbc5c6b10e8f00c5a5e82fa56fddade 514 SUPERFAMILY SSF53067 252 501 1.49E-67 T 12-10-2018 BAMF_3265 5dbc5c6b10e8f00c5a5e82fa56fddade 514 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 454 9.4E-35 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BAMF_3265 5dbc5c6b10e8f00c5a5e82fa56fddade 514 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 367 387 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BAMF_3265 5dbc5c6b10e8f00c5a5e82fa56fddade 514 Gene3D G3DSA:3.30.420.40 252 513 4.2E-89 T 12-10-2018 BAMF_3265 5dbc5c6b10e8f00c5a5e82fa56fddade 514 TIGRFAM TIGR01314 gntK_FGGY: gluconate kinase 7 509 8.5E-204 T 12-10-2018 IPR006002 Gluconate kinase GO:0019521|GO:0046316 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 BAMF_3265 5dbc5c6b10e8f00c5a5e82fa56fddade 514 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 250 1.4E-69 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BAMF_3265 5dbc5c6b10e8f00c5a5e82fa56fddade 514 Gene3D G3DSA:3.30.420.40 3 251 4.1E-79 T 12-10-2018 BAMF_3231 4b869cefd98198240912758bb86d3dd1 381 Pfam PF00571 CBS domain 312 364 5.4E-7 T 12-10-2018 IPR000644 CBS domain BAMF_3231 4b869cefd98198240912758bb86d3dd1 381 Pfam PF00571 CBS domain 252 298 2.0E-9 T 12-10-2018 IPR000644 CBS domain BAMF_3231 4b869cefd98198240912758bb86d3dd1 381 SMART SM00116 259 307 7.2E-8 T 12-10-2018 IPR000644 CBS domain BAMF_3231 4b869cefd98198240912758bb86d3dd1 381 SMART SM00116 319 367 1.1E-5 T 12-10-2018 IPR000644 CBS domain BAMF_3231 4b869cefd98198240912758bb86d3dd1 381 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 12 372 3.0E-172 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 BAMF_3231 4b869cefd98198240912758bb86d3dd1 381 SUPERFAMILY SSF52540 1 240 6.19E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3231 4b869cefd98198240912758bb86d3dd1 381 SUPERFAMILY SSF54631 251 376 7.2E-27 T 12-10-2018 BAMF_3231 4b869cefd98198240912758bb86d3dd1 381 SMART SM00382 27 213 3.2E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3231 4b869cefd98198240912758bb86d3dd1 381 Pfam PF00005 ABC transporter 19 163 1.6E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3231 4b869cefd98198240912758bb86d3dd1 381 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3231 4b869cefd98198240912758bb86d3dd1 381 Gene3D G3DSA:3.40.50.300 1 240 7.3E-75 T 12-10-2018 BAMF_3231 4b869cefd98198240912758bb86d3dd1 381 Gene3D G3DSA:3.10.580.10 248 373 3.6E-37 T 12-10-2018 BAMF_3443 7f2af733bacbcecdfaf96c4ecc44c253 177 Pfam PF02525 Flavodoxin-like fold 5 170 4.9E-48 T 12-10-2018 IPR003680 Flavodoxin-like fold BAMF_3443 7f2af733bacbcecdfaf96c4ecc44c253 177 SUPERFAMILY SSF52218 5 176 6.98E-48 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_3443 7f2af733bacbcecdfaf96c4ecc44c253 177 Gene3D G3DSA:3.40.50.360 4 177 2.2E-56 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_0662 d16b8460c020a1f45044f120cd2fb817 96 Gene3D G3DSA:1.10.20.60 1 94 2.5E-33 T 12-10-2018 BAMF_0662 d16b8460c020a1f45044f120cd2fb817 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 96 5.2E-37 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 BAMF_0662 d16b8460c020a1f45044f120cd2fb817 96 SUPERFAMILY SSF141000 3 94 4.32E-33 T 12-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 BAMF_0662 d16b8460c020a1f45044f120cd2fb817 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 5.5E-24 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 BAMF_0662 d16b8460c020a1f45044f120cd2fb817 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 26.378 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 BAMF_2300 eb121a41ccd4ec07e9d7054fcaa22d3a 419 Pfam PF00364 Biotin-requiring enzyme 5 77 3.0E-23 T 12-10-2018 IPR000089 Biotin/lipoyl attachment BAMF_2300 eb121a41ccd4ec07e9d7054fcaa22d3a 419 Gene3D G3DSA:3.30.559.10 173 419 4.9E-99 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_2300 eb121a41ccd4ec07e9d7054fcaa22d3a 419 Gene3D G3DSA:4.10.320.10 105 162 4.4E-16 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BAMF_2300 eb121a41ccd4ec07e9d7054fcaa22d3a 419 SUPERFAMILY SSF51230 3 95 4.71E-26 T 12-10-2018 IPR011053 Single hybrid motif BAMF_2300 eb121a41ccd4ec07e9d7054fcaa22d3a 419 SUPERFAMILY SSF52777 191 412 4.89E-85 T 12-10-2018 BAMF_2300 eb121a41ccd4ec07e9d7054fcaa22d3a 419 Gene3D G3DSA:2.40.50.100 1 102 1.8E-27 T 12-10-2018 BAMF_2300 eb121a41ccd4ec07e9d7054fcaa22d3a 419 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BAMF_2300 eb121a41ccd4ec07e9d7054fcaa22d3a 419 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 190 414 3.1E-85 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BAMF_2300 eb121a41ccd4ec07e9d7054fcaa22d3a 419 Pfam PF02817 e3 binding domain 114 148 1.9E-12 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BAMF_2300 eb121a41ccd4ec07e9d7054fcaa22d3a 419 SUPERFAMILY SSF47005 108 152 1.29E-11 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BAMF_2121 9debd05c1fed4c6c7a032c786c767114 412 Pfam PF13482 RNase_H superfamily 105 273 1.2E-39 T 12-10-2018 IPR038720 YprB, ribonuclease H-like domain BAMF_2121 9debd05c1fed4c6c7a032c786c767114 412 SUPERFAMILY SSF53098 104 280 2.08E-27 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BAMF_2121 9debd05c1fed4c6c7a032c786c767114 412 Gene3D G3DSA:1.25.40.10 245 405 2.4E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_0104 25e5e8be8e4f566608fec0718fe982e0 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 12-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0104 25e5e8be8e4f566608fec0718fe982e0 166 SUPERFAMILY SSF160369 5 160 1.96E-55 T 12-10-2018 BAMF_0104 25e5e8be8e4f566608fec0718fe982e0 166 Gene3D G3DSA:3.30.70.1730 2 165 4.8E-43 T 12-10-2018 BAMF_0104 25e5e8be8e4f566608fec0718fe982e0 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 29.397 T 12-10-2018 IPR022973 Ribosomal protein L10 BAMF_0104 25e5e8be8e4f566608fec0718fe982e0 166 Pfam PF00466 Ribosomal protein L10 6 101 1.3E-30 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 BAMF_1885 dea4fd42e6db7b162055552f51f74650 48 Hamap MF_00665 Small, acid-soluble spore protein O [sspO]. 1 48 20.261 T 12-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 BAMF_1885 dea4fd42e6db7b162055552f51f74650 48 TIGRFAM TIGR02864 spore_sspO: small, acid-soluble spore protein O 1 48 3.2E-27 T 12-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 BAMF_1885 dea4fd42e6db7b162055552f51f74650 48 ProDom PD050103 O SPORE SMALL ACID-SOLUBLE SASP SPORULATION CAPSID COAT K SEQUENCING 3 48 7.0E-19 T 12-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 BAMF_1885 dea4fd42e6db7b162055552f51f74650 48 Pfam PF08175 Small acid-soluble spore protein O family 2 48 1.5E-25 T 12-10-2018 BAMF_0439 4bb3ca5b3161825a04f6384a50c51aec 121 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 112 2.4E-22 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BAMF_0439 4bb3ca5b3161825a04f6384a50c51aec 121 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 119 3.0E-40 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BAMF_0439 4bb3ca5b3161825a04f6384a50c51aec 121 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 118 1.2E-34 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BAMF_0439 4bb3ca5b3161825a04f6384a50c51aec 121 Gene3D G3DSA:3.90.470.20 1 121 8.0E-42 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BAMF_0439 4bb3ca5b3161825a04f6384a50c51aec 121 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 120 1.8E-47 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BAMF_0439 4bb3ca5b3161825a04f6384a50c51aec 121 SUPERFAMILY SSF56214 1 117 6.8E-37 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BAMF_0439 4bb3ca5b3161825a04f6384a50c51aec 121 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 118 26.401 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BAMF_3596 a920e53297d311174dc433519dfbe961 296 SUPERFAMILY SSF46785 4 111 1.27E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3596 a920e53297d311174dc433519dfbe961 296 Gene3D G3DSA:3.40.190.290 91 294 7.4E-46 T 12-10-2018 BAMF_3596 a920e53297d311174dc433519dfbe961 296 SUPERFAMILY SSF53850 90 294 2.17E-39 T 12-10-2018 BAMF_3596 a920e53297d311174dc433519dfbe961 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 4.4E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3596 a920e53297d311174dc433519dfbe961 296 Gene3D G3DSA:1.10.10.10 3 90 2.7E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3596 a920e53297d311174dc433519dfbe961 296 Pfam PF03466 LysR substrate binding domain 90 273 8.0E-46 T 12-10-2018 IPR005119 LysR, substrate-binding BAMF_3596 a920e53297d311174dc433519dfbe961 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3596 a920e53297d311174dc433519dfbe961 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3596 a920e53297d311174dc433519dfbe961 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_2361 e2390f83686aa50c9b18f31ca5649987 617 SUPERFAMILY SSF52540 89 319 2.19E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2361 e2390f83686aa50c9b18f31ca5649987 617 SMART SM00490 446 526 7.2E-22 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_2361 e2390f83686aa50c9b18f31ca5649987 617 Pfam PF00271 Helicase conserved C-terminal domain 424 526 2.3E-21 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_2361 e2390f83686aa50c9b18f31ca5649987 617 SMART SM00487 117 300 2.8E-33 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_2361 e2390f83686aa50c9b18f31ca5649987 617 SUPERFAMILY SSF52540 229 579 2.37E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2361 e2390f83686aa50c9b18f31ca5649987 617 Gene3D G3DSA:3.40.50.10810 123 321 6.0E-42 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily BAMF_2361 e2390f83686aa50c9b18f31ca5649987 617 Gene3D G3DSA:3.40.50.300 331 604 3.5E-52 T 12-10-2018 BAMF_2361 e2390f83686aa50c9b18f31ca5649987 617 Pfam PF00176 SNF2 family N-terminal domain 140 355 9.8E-34 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 BAMF_0704 103dab50c47dcde756dc08309bf76d1c 485 Gene3D G3DSA:3.40.309.10 256 443 7.9E-152 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BAMF_0704 103dab50c47dcde756dc08309bf76d1c 485 SUPERFAMILY SSF53720 6 478 4.06E-149 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BAMF_0704 103dab50c47dcde756dc08309bf76d1c 485 Gene3D G3DSA:3.40.605.10 25 472 7.9E-152 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BAMF_0704 103dab50c47dcde756dc08309bf76d1c 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BAMF_0704 103dab50c47dcde756dc08309bf76d1c 485 Pfam PF00171 Aldehyde dehydrogenase family 16 474 8.3E-155 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BAMF_1697 b6cbd98dc05c681c43ed9946138014ab 202 Pfam PF03448 MgtE intracellular N domain 137 197 4.7E-7 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BAMF_1697 b6cbd98dc05c681c43ed9946138014ab 202 Gene3D G3DSA:1.25.60.10 78 202 4.7E-5 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily BAMF_1697 b6cbd98dc05c681c43ed9946138014ab 202 SUPERFAMILY SSF158791 138 194 1.44E-6 T 12-10-2018 BAMF_1493 58e81de2796fd1643c30471637023147 151 Pfam PF00258 Flavodoxin 6 134 1.0E-27 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BAMF_1493 58e81de2796fd1643c30471637023147 151 SUPERFAMILY SSF52218 1 145 5.78E-37 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_1493 58e81de2796fd1643c30471637023147 151 TIGRFAM TIGR01753 flav_short: flavodoxin 4 143 1.1E-44 T 12-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 BAMF_1493 58e81de2796fd1643c30471637023147 151 Gene3D G3DSA:3.40.50.360 1 144 3.2E-33 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_3328 9fc7fd9e433f8f733e00abae646fd32a 484 Pfam PF13432 Tetratricopeptide repeat 158 206 0.0013 T 12-10-2018 BAMF_3328 9fc7fd9e433f8f733e00abae646fd32a 484 SUPERFAMILY SSF48452 23 316 1.07E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_3328 9fc7fd9e433f8f733e00abae646fd32a 484 SMART SM00028 187 220 0.032 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_3328 9fc7fd9e433f8f733e00abae646fd32a 484 SMART SM00028 55 88 500.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_3328 9fc7fd9e433f8f733e00abae646fd32a 484 SMART SM00028 21 54 3.2 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_3328 9fc7fd9e433f8f733e00abae646fd32a 484 Gene3D G3DSA:1.25.40.10 154 321 2.6E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_3328 9fc7fd9e433f8f733e00abae646fd32a 484 Gene3D G3DSA:1.25.40.10 4 137 9.4E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_0670 31baf89d55a7285651580f985dc50702 317 Pfam PF00005 ABC transporter 24 168 4.4E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0670 31baf89d55a7285651580f985dc50702 317 Gene3D G3DSA:3.40.50.300 2 245 4.9E-69 T 12-10-2018 BAMF_0670 31baf89d55a7285651580f985dc50702 317 SUPERFAMILY SSF52540 7 231 1.38E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0670 31baf89d55a7285651580f985dc50702 317 SMART SM00382 32 217 2.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0670 31baf89d55a7285651580f985dc50702 317 Pfam PF13732 Domain of unknown function (DUF4162) 222 302 3.2E-6 T 12-10-2018 IPR025302 Domain of unknown function DUF4162 BAMF_0670 31baf89d55a7285651580f985dc50702 317 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0385 386eaee9a8158bab127a5189e1431fbf 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 30 259 1.3E-64 T 12-10-2018 BAMF_0385 386eaee9a8158bab127a5189e1431fbf 264 Gene3D G3DSA:3.40.50.720 1 260 6.0E-86 T 12-10-2018 BAMF_0385 386eaee9a8158bab127a5189e1431fbf 264 SUPERFAMILY SSF51735 19 259 6.53E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0385 386eaee9a8158bab127a5189e1431fbf 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_0385 386eaee9a8158bab127a5189e1431fbf 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 1.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0385 386eaee9a8158bab127a5189e1431fbf 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 1.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0385 386eaee9a8158bab127a5189e1431fbf 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 97 108 1.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0385 386eaee9a8158bab127a5189e1431fbf 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 1.8E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0385 386eaee9a8158bab127a5189e1431fbf 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 1.8E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0385 386eaee9a8158bab127a5189e1431fbf 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 1.8E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0385 386eaee9a8158bab127a5189e1431fbf 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 108 1.8E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0385 386eaee9a8158bab127a5189e1431fbf 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 1.8E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 Gene3D G3DSA:3.30.230.10 298 456 1.0E-19 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 452 3.0E-228 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 SUPERFAMILY SSF52540 68 292 2.38E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 Pfam PF13481 AAA domain 71 222 9.5E-17 T 12-10-2018 BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 SUPERFAMILY SSF54211 255 455 2.01E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 Gene3D G3DSA:3.40.50.300 64 286 1.2E-43 T 12-10-2018 BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 456 45.732 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 364 430 5.4E-9 T 12-10-2018 BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 SMART SM00382 90 244 3.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 PRINTS PR01874 DNA repair protein radA signature 322 345 3.4E-94 T 12-10-2018 BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 PRINTS PR01874 DNA repair protein radA signature 10 34 3.4E-94 T 12-10-2018 BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 PRINTS PR01874 DNA repair protein radA signature 213 241 3.4E-94 T 12-10-2018 BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 PRINTS PR01874 DNA repair protein radA signature 82 110 3.4E-94 T 12-10-2018 BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 PRINTS PR01874 DNA repair protein radA signature 124 141 3.4E-94 T 12-10-2018 BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 PRINTS PR01874 DNA repair protein radA signature 248 274 3.4E-94 T 12-10-2018 BAMF_0086 af0076414fed25ef2b757f6a91f05a83 459 PRINTS PR01874 DNA repair protein radA signature 174 198 3.4E-94 T 12-10-2018 BAMF_2613 abf7274e3c291643fb3f8813b9494bd1 250 Pfam PF01478 Type IV leader peptidase family 101 204 2.2E-17 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 BAMF_2613 abf7274e3c291643fb3f8813b9494bd1 250 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 7 90 6.7E-25 T 12-10-2018 IPR010627 Peptidase A24A, N-terminal BAMF_0309 6070b5d7e0712e3151b70ef799999fd0 185 SUPERFAMILY SSF53697 4 184 5.87E-40 T 12-10-2018 BAMF_0309 6070b5d7e0712e3151b70ef799999fd0 185 TIGRFAM TIGR03127 RuMP_HxlB: 6-phospho 3-hexuloisomerase 8 185 2.1E-72 T 12-10-2018 IPR017552 3-hexulose-6-phosphate isomerase GO:0016853 BAMF_0309 6070b5d7e0712e3151b70ef799999fd0 185 Pfam PF01380 SIS domain 33 154 3.5E-19 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BAMF_0309 6070b5d7e0712e3151b70ef799999fd0 185 Gene3D G3DSA:3.40.50.10490 1 185 1.5E-55 T 12-10-2018 BAMF_1423 8885792446b3dfdaec1cfdbeef860874 801 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 369 533 5.1E-37 T 12-10-2018 IPR000160 GGDEF domain BAMF_1423 8885792446b3dfdaec1cfdbeef860874 801 Gene3D G3DSA:3.20.20.450 548 797 6.7E-93 T 12-10-2018 IPR035919 EAL domain superfamily BAMF_1423 8885792446b3dfdaec1cfdbeef860874 801 Gene3D G3DSA:3.30.450.20 245 366 1.7E-10 T 12-10-2018 BAMF_1423 8885792446b3dfdaec1cfdbeef860874 801 SMART SM00267 361 534 1.7E-65 T 12-10-2018 IPR000160 GGDEF domain BAMF_1423 8885792446b3dfdaec1cfdbeef860874 801 Gene3D G3DSA:3.30.70.270 367 547 4.9E-56 T 12-10-2018 BAMF_1423 8885792446b3dfdaec1cfdbeef860874 801 SMART SM00052 544 789 3.6E-112 T 12-10-2018 IPR001633 EAL domain BAMF_1423 8885792446b3dfdaec1cfdbeef860874 801 SUPERFAMILY SSF55073 377 535 1.33E-43 T 12-10-2018 IPR029787 Nucleotide cyclase BAMF_1423 8885792446b3dfdaec1cfdbeef860874 801 Pfam PF00563 EAL domain 551 784 3.4E-66 T 12-10-2018 IPR001633 EAL domain BAMF_1423 8885792446b3dfdaec1cfdbeef860874 801 Pfam PF00990 Diguanylate cyclase, GGDEF domain 372 528 6.4E-48 T 12-10-2018 IPR000160 GGDEF domain BAMF_1423 8885792446b3dfdaec1cfdbeef860874 801 SUPERFAMILY SSF55785 245 359 8.07E-7 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_1423 8885792446b3dfdaec1cfdbeef860874 801 Pfam PF03707 Bacterial signalling protein N terminal repeat 116 161 9.8E-8 T 12-10-2018 IPR005330 MHYT domain BAMF_1423 8885792446b3dfdaec1cfdbeef860874 801 Pfam PF03707 Bacterial signalling protein N terminal repeat 53 111 8.9E-12 T 12-10-2018 IPR005330 MHYT domain BAMF_1423 8885792446b3dfdaec1cfdbeef860874 801 Pfam PF03707 Bacterial signalling protein N terminal repeat 184 241 1.4E-6 T 12-10-2018 IPR005330 MHYT domain BAMF_1423 8885792446b3dfdaec1cfdbeef860874 801 SUPERFAMILY SSF141868 551 796 2.88E-83 T 12-10-2018 IPR035919 EAL domain superfamily BAMF_2657 8925d4e2e63add77715c06234f9f6fde 325 Gene3D G3DSA:3.40.50.620 2 193 1.3E-53 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_2657 8925d4e2e63add77715c06234f9f6fde 325 Pfam PF01012 Electron transfer flavoprotein domain 7 180 5.7E-42 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BAMF_2657 8925d4e2e63add77715c06234f9f6fde 325 SUPERFAMILY SSF52467 198 317 1.41E-48 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BAMF_2657 8925d4e2e63add77715c06234f9f6fde 325 Gene3D G3DSA:3.40.50.1220 194 325 4.9E-57 T 12-10-2018 BAMF_2657 8925d4e2e63add77715c06234f9f6fde 325 SUPERFAMILY SSF52402 3 191 9.07E-48 T 12-10-2018 BAMF_2657 8925d4e2e63add77715c06234f9f6fde 325 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 262 288 - T 12-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 BAMF_2657 8925d4e2e63add77715c06234f9f6fde 325 PIRSF PIRSF000089 1 322 2.5E-113 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 BAMF_2657 8925d4e2e63add77715c06234f9f6fde 325 SMART SM00893 5 195 1.7E-44 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BAMF_2657 8925d4e2e63add77715c06234f9f6fde 325 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 198 281 8.5E-36 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 BAMF_1047 12cdd1ea59337c7b5b2472fb592457ac 199 SUPERFAMILY SSF69593 17 194 5.36E-38 T 12-10-2018 BAMF_1047 12cdd1ea59337c7b5b2472fb592457ac 199 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 19 141 1.9E-37 T 12-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 BAMF_1047 12cdd1ea59337c7b5b2472fb592457ac 199 Pfam PF01553 Acyltransferase 19 141 2.1E-23 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BAMF_1047 12cdd1ea59337c7b5b2472fb592457ac 199 SMART SM00563 33 144 1.0E-29 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BAMF_2093 d4d4c93025f2abd4554cd96b040af7c8 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.5E-29 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BAMF_2093 d4d4c93025f2abd4554cd96b040af7c8 66 SMART SM00357 3 66 2.0E-29 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 BAMF_2093 d4d4c93025f2abd4554cd96b040af7c8 66 Gene3D G3DSA:2.40.50.140 1 66 5.9E-30 T 12-10-2018 BAMF_2093 d4d4c93025f2abd4554cd96b040af7c8 66 SUPERFAMILY SSF50249 1 65 9.04E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_2093 d4d4c93025f2abd4554cd96b040af7c8 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 12-10-2018 IPR019844 Cold-shock conserved site BAMF_2093 d4d4c93025f2abd4554cd96b040af7c8 66 PIRSF PIRSF002599 1 66 4.9E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 BAMF_2093 d4d4c93025f2abd4554cd96b040af7c8 66 PRINTS PR00050 Cold shock protein signature 39 57 5.0E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BAMF_2093 d4d4c93025f2abd4554cd96b040af7c8 66 PRINTS PR00050 Cold shock protein signature 24 33 5.0E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BAMF_2093 d4d4c93025f2abd4554cd96b040af7c8 66 PRINTS PR00050 Cold shock protein signature 4 19 5.0E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BAMF_0653 7eb66b14ac7c26366f9f1ac7d7a0fd67 103 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 7 94 2.4E-49 T 12-10-2018 IPR013368 TrpR homologue YerC/YecD BAMF_0653 7eb66b14ac7c26366f9f1ac7d7a0fd67 103 SUPERFAMILY SSF48295 3 94 2.41E-32 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BAMF_0653 7eb66b14ac7c26366f9f1ac7d7a0fd67 103 Gene3D G3DSA:1.10.1270.10 2 103 9.0E-39 T 12-10-2018 IPR038116 TrpR-like superfamily BAMF_0653 7eb66b14ac7c26366f9f1ac7d7a0fd67 103 PIRSF PIRSF012508 1 100 1.3E-47 T 12-10-2018 IPR013368 TrpR homologue YerC/YecD BAMF_0653 7eb66b14ac7c26366f9f1ac7d7a0fd67 103 Pfam PF01371 Trp repressor protein 10 94 2.5E-34 T 12-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 BAMF_3030 cbbc78d33f0535198bef88148161c706 433 SUPERFAMILY SSF55021 349 422 7.33E-11 T 12-10-2018 BAMF_3030 cbbc78d33f0535198bef88148161c706 433 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 4.1E-29 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 BAMF_3030 cbbc78d33f0535198bef88148161c706 433 PIRSF PIRSF000098 1 430 3.4E-178 T 12-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BAMF_3030 cbbc78d33f0535198bef88148161c706 433 SUPERFAMILY SSF55347 137 302 2.29E-54 T 12-10-2018 BAMF_3030 cbbc78d33f0535198bef88148161c706 433 SUPERFAMILY SSF51735 3 158 1.06E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3030 cbbc78d33f0535198bef88148161c706 433 Gene3D G3DSA:3.40.50.720 4 336 6.9E-152 T 12-10-2018 BAMF_3030 cbbc78d33f0535198bef88148161c706 433 Pfam PF00742 Homoserine dehydrogenase 137 315 1.0E-66 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BAMF_3030 cbbc78d33f0535198bef88148161c706 433 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BAMF_3030 cbbc78d33f0535198bef88148161c706 433 Pfam PF01842 ACT domain 351 416 4.9E-13 T 12-10-2018 IPR002912 ACT domain BAMF_3030 cbbc78d33f0535198bef88148161c706 433 Gene3D G3DSA:3.30.70.260 344 418 6.9E-152 T 12-10-2018 BAMF_3030 cbbc78d33f0535198bef88148161c706 433 Gene3D G3DSA:3.30.360.10 136 343 6.9E-152 T 12-10-2018 BAMF_2524 af23a35cce7fc56be73e7962783f8395 179 SUPERFAMILY SSF53335 32 171 4.02E-17 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_2524 af23a35cce7fc56be73e7962783f8395 179 Pfam PF08241 Methyltransferase domain 41 139 4.2E-12 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BAMF_2524 af23a35cce7fc56be73e7962783f8395 179 Gene3D G3DSA:3.40.50.150 3 177 6.2E-18 T 12-10-2018 BAMF_3150 9f4da331f79154928e037456a53015fb 360 SMART SM00387 253 346 1.1E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3150 9f4da331f79154928e037456a53015fb 360 Gene3D G3DSA:3.30.565.10 215 349 7.9E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3150 9f4da331f79154928e037456a53015fb 360 Pfam PF07730 Histidine kinase 150 217 1.4E-18 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BAMF_3150 9f4da331f79154928e037456a53015fb 360 Gene3D G3DSA:1.10.287.130 75 203 1.9E-6 T 12-10-2018 BAMF_3150 9f4da331f79154928e037456a53015fb 360 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 253 343 2.4E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3150 9f4da331f79154928e037456a53015fb 360 SUPERFAMILY SSF55874 222 343 2.49E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3150 9f4da331f79154928e037456a53015fb 360 SMART SM00304 74 126 8.7E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_3150 9f4da331f79154928e037456a53015fb 360 PIRSF PIRSF037431 7 352 1.3E-127 T 12-10-2018 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 BAMF_1428 732cb7239b2ed6ff23a715f701af386e 64 Gene3D G3DSA:1.10.8.910 5 64 1.9E-30 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily BAMF_1428 732cb7239b2ed6ff23a715f701af386e 64 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 20 29 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 BAMF_1428 732cb7239b2ed6ff23a715f701af386e 64 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 5 59 3.0E-24 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 BAMF_1428 732cb7239b2ed6ff23a715f701af386e 64 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 38 52 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 BAMF_2229 33779fc3b3756adc42c5856b03bd4d5a 185 ProSitePatterns PS00760 Signal peptidases I lysine active site. 85 97 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 BAMF_2229 33779fc3b3756adc42c5856b03bd4d5a 185 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 83 95 1.7E-25 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BAMF_2229 33779fc3b3756adc42c5856b03bd4d5a 185 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 34 50 1.7E-25 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BAMF_2229 33779fc3b3756adc42c5856b03bd4d5a 185 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 137 156 1.7E-25 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BAMF_2229 33779fc3b3756adc42c5856b03bd4d5a 185 Gene3D G3DSA:2.10.109.10 64 185 1.5E-37 T 12-10-2018 BAMF_2229 33779fc3b3756adc42c5856b03bd4d5a 185 Pfam PF00717 Peptidase S24-like 41 107 1.5E-19 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BAMF_2229 33779fc3b3756adc42c5856b03bd4d5a 185 ProSitePatterns PS00501 Signal peptidases I serine active site. 43 50 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 BAMF_2229 33779fc3b3756adc42c5856b03bd4d5a 185 SUPERFAMILY SSF51306 32 182 5.49E-49 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BAMF_2229 33779fc3b3756adc42c5856b03bd4d5a 185 ProSitePatterns PS00761 Signal peptidases I signature 3. 142 155 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 BAMF_2229 33779fc3b3756adc42c5856b03bd4d5a 185 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 17 179 6.6E-54 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BAMF_3905 a61a9cb6d23ab02dd175874a1028a91b 172 Gene3D G3DSA:2.40.50.140 1 110 6.6E-47 T 12-10-2018 BAMF_3905 a61a9cb6d23ab02dd175874a1028a91b 172 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 37.132 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BAMF_3905 a61a9cb6d23ab02dd175874a1028a91b 172 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 172 2.7E-53 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BAMF_3905 a61a9cb6d23ab02dd175874a1028a91b 172 SUPERFAMILY SSF50249 1 172 9.6E-58 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_3905 a61a9cb6d23ab02dd175874a1028a91b 172 Pfam PF00436 Single-strand binding protein family 2 103 4.2E-38 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 BAMF_0874 55708b2b8bd16735f4d46a9858f2824d 56 Pfam PF04259 Small, acid-soluble spore protein, gamma-type 7 56 4.3E-16 T 12-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 BAMF_0874 55708b2b8bd16735f4d46a9858f2824d 56 TIGRFAM TIGR01442 SASP_gamma: small, acid-soluble spore protein, gamma-type 7 56 8.8E-17 T 12-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 BAMF_3576 799508114c51a3748315b60c1159947c 690 Pfam PF00912 Transglycosylase 65 237 1.7E-61 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_3576 799508114c51a3748315b60c1159947c 690 SUPERFAMILY SSF56601 219 659 1.76E-110 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_3576 799508114c51a3748315b60c1159947c 690 Gene3D G3DSA:3.40.710.10 261 666 1.0E-109 T 12-10-2018 BAMF_3576 799508114c51a3748315b60c1159947c 690 Gene3D G3DSA:1.10.3810.10 66 260 3.8E-73 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_3576 799508114c51a3748315b60c1159947c 690 Pfam PF00905 Penicillin binding protein transpeptidase domain 330 599 7.1E-28 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BAMF_3576 799508114c51a3748315b60c1159947c 690 SUPERFAMILY SSF53955 50 263 2.28E-72 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BAMF_3576 799508114c51a3748315b60c1159947c 690 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 73 609 1.2E-167 T 12-10-2018 BAMF_2935 42024f740fd2e275e20820d8e1e59655 450 Gene3D G3DSA:3.40.50.10490 59 226 1.3E-148 T 12-10-2018 BAMF_2935 42024f740fd2e275e20820d8e1e59655 450 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 202 215 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2935 42024f740fd2e275e20820d8e1e59655 450 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 435 26.876 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2935 42024f740fd2e275e20820d8e1e59655 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 408 421 7.7E-30 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2935 42024f740fd2e275e20820d8e1e59655 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 394 408 7.7E-30 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2935 42024f740fd2e275e20820d8e1e59655 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 198 216 7.7E-30 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2935 42024f740fd2e275e20820d8e1e59655 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 273 294 7.7E-30 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2935 42024f740fd2e275e20820d8e1e59655 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 376 394 7.7E-30 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2935 42024f740fd2e275e20820d8e1e59655 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 7.7E-30 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2935 42024f740fd2e275e20820d8e1e59655 450 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 408 425 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2935 42024f740fd2e275e20820d8e1e59655 450 Pfam PF00342 Phosphoglucose isomerase 355 426 8.8E-6 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2935 42024f740fd2e275e20820d8e1e59655 450 Pfam PF00342 Phosphoglucose isomerase 76 295 1.2E-19 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_2935 42024f740fd2e275e20820d8e1e59655 450 SUPERFAMILY SSF53697 5 447 4.28E-142 T 12-10-2018 BAMF_2935 42024f740fd2e275e20820d8e1e59655 450 Gene3D G3DSA:3.40.50.10490 227 417 1.3E-148 T 12-10-2018 BAMF_2935 42024f740fd2e275e20820d8e1e59655 450 Gene3D G3DSA:3.40.50.10490 1 58 1.8E-18 T 12-10-2018 BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 SUPERFAMILY SSF47336 969 1040 6.81E-22 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 Gene3D G3DSA:3.30.559.10 15 382 1.4E-156 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 SUPERFAMILY SSF53474 1057 1268 9.54E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 Gene3D G3DSA:1.10.1200.10 964 1046 2.0E-29 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 SUPERFAMILY SSF52777 193 439 4.22E-53 T 12-10-2018 BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 Gene3D G3DSA:3.40.50.980 492 627 3.0E-111 T 12-10-2018 BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 Gene3D G3DSA:3.30.300.30 862 963 8.9E-29 T 12-10-2018 BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 ProSitePatterns PS00455 Putative AMP-binding domain signature. 612 623 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 SUPERFAMILY SSF56801 429 987 2.35E-145 T 12-10-2018 BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 Gene3D G3DSA:3.40.50.980 475 779 3.0E-111 T 12-10-2018 BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 Pfam PF13193 AMP-binding enzyme C-terminal domain 875 948 1.0E-5 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 Pfam PF00668 Condensation domain 9 450 2.0E-133 T 12-10-2018 IPR001242 Condensation domain BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 491 891 2.4E-126 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 SUPERFAMILY SSF52777 15 192 8.23E-44 T 12-10-2018 BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 Pfam PF00975 Thioesterase domain 1061 1259 8.5E-32 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 ProSitePatterns PS00012 Phosphopantetheine attachment site. 999 1014 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 Gene3D G3DSA:2.30.38.10 780 857 2.2E-31 T 12-10-2018 BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 SMART SM00823 Phosphopantetheine attachment site 975 1044 3.4E-6 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 Pfam PF00501 AMP-binding enzyme 470 867 2.3E-98 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 Gene3D G3DSA:3.30.559.30 194 446 1.4E-156 T 12-10-2018 BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 Gene3D G3DSA:1.10.287.490 1153 1207 1.0E-69 T 12-10-2018 BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 Pfam PF00550 Phosphopantetheine attachment site 976 1040 2.0E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_0314 9854f4e2209127182c6795b2773fb4ee 1279 Gene3D G3DSA:3.40.50.1820 1057 1262 1.0E-69 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1262 7cac13f078f2fedceb08bedccd8da9dd 77 SUPERFAMILY SSF89447 8 54 7.06E-12 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily BAMF_1262 7cac13f078f2fedceb08bedccd8da9dd 77 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 12 53 1.1E-13 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BAMF_1262 7cac13f078f2fedceb08bedccd8da9dd 77 Gene3D G3DSA:2.10.260.10 9 53 5.4E-11 T 12-10-2018 BAMF_1262 7cac13f078f2fedceb08bedccd8da9dd 77 ProDom PD058861 TRANSCRIPTIONAL ABRB FAMILY REGULATOR AF0476 REGULATOR 9 66 9.0E-4 T 12-10-2018 BAMF_1262 7cac13f078f2fedceb08bedccd8da9dd 77 SMART SM00966 13 57 1.3E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BAMF_1262 7cac13f078f2fedceb08bedccd8da9dd 77 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 13 44 3.2E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BAMF_2246 099fb80174e6d15618dccfeac9846d28 296 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 6 296 5.3E-102 T 12-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 BAMF_2246 099fb80174e6d15618dccfeac9846d28 296 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 296 64.546 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 BAMF_2246 099fb80174e6d15618dccfeac9846d28 296 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 296 6.3E-121 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 BAMF_2246 099fb80174e6d15618dccfeac9846d28 296 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 89 3.2E-24 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BAMF_2246 099fb80174e6d15618dccfeac9846d28 296 Pfam PF00589 Phage integrase family 111 282 5.3E-56 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BAMF_2246 099fb80174e6d15618dccfeac9846d28 296 Gene3D G3DSA:1.10.443.10 110 290 2.4E-69 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BAMF_2246 099fb80174e6d15618dccfeac9846d28 296 SUPERFAMILY SSF47823 4 99 1.59E-19 T 12-10-2018 BAMF_2246 099fb80174e6d15618dccfeac9846d28 296 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 296 56.746 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD BAMF_2246 099fb80174e6d15618dccfeac9846d28 296 SUPERFAMILY SSF56349 106 294 5.0E-60 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BAMF_2246 099fb80174e6d15618dccfeac9846d28 296 Gene3D G3DSA:1.10.150.130 1 98 4.4E-23 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 SUPERFAMILY SSF88659 107 180 5.23E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 SUPERFAMILY SSF88946 4 103 9.29E-28 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 PRINTS PR00046 Major sigma-70 factor signature 206 218 4.7E-9 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 PRINTS PR00046 Major sigma-70 factor signature 223 238 4.7E-9 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 PRINTS PR00046 Major sigma-70 factor signature 58 71 4.7E-9 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 PRINTS PR00046 Major sigma-70 factor signature 238 249 4.7E-9 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 223 249 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 Pfam PF04539 Sigma-70 region 3 113 187 5.8E-18 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 28 253 8.5E-90 T 12-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 253 1.2E-35 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 Gene3D G3DSA:1.20.120.1810 2 102 1.3E-15 T 12-10-2018 BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 TIGRFAM TIGR02941 Sigma_B: RNA polymerase sigma-B factor 3 253 6.9E-122 T 12-10-2018 IPR014288 RNA polymerase sigma-B factor GO:0016987 BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 Gene3D G3DSA:1.20.140.160 106 254 1.8E-30 T 12-10-2018 BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 SUPERFAMILY SSF88659 181 253 1.85E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 Pfam PF04545 Sigma-70, region 4 202 251 5.2E-17 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BAMF_0450 a96f2fcf7aaba04b10df875b5a41583a 262 Pfam PF04542 Sigma-70 region 2 34 103 6.5E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_2889 e283cf8ef29b15d49c9cbd17c96c987f 223 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 58 123 1.0E-14 T 12-10-2018 IPR039561 Peptidase M15C GO:0008233 BAMF_2889 e283cf8ef29b15d49c9cbd17c96c987f 223 Gene3D G3DSA:3.30.1380.10 3 124 4.7E-23 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BAMF_2889 e283cf8ef29b15d49c9cbd17c96c987f 223 SUPERFAMILY SSF55166 7 124 3.18E-20 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BAMF_3104 496b1ed73de31c07a2e835bf33de952e 142 Pfam PF01381 Helix-turn-helix 8 59 2.4E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_3104 496b1ed73de31c07a2e835bf33de952e 142 Gene3D G3DSA:1.10.260.40 5 141 5.6E-14 T 12-10-2018 BAMF_3104 496b1ed73de31c07a2e835bf33de952e 142 SUPERFAMILY SSF47413 2 65 8.61E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_3104 496b1ed73de31c07a2e835bf33de952e 142 SMART SM00530 6 59 6.1E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 SUPERFAMILY SSF55681 244 525 5.38E-94 T 12-10-2018 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 70 635 34.187 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 SMART SM00863 171 220 8.1E-22 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 SUPERFAMILY SSF52954 527 635 4.68E-29 T 12-10-2018 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 76 632 1.6E-230 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 Pfam PF03129 Anticodon binding domain 541 631 6.0E-19 T 12-10-2018 IPR004154 Anticodon-binding BAMF_1949 962450471c899d6b5376c41ab49eb832 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 323 529 2.3E-41 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 Gene3D G3DSA:3.30.930.10 225 531 3.6E-131 T 12-10-2018 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 SUPERFAMILY SSF55186 68 242 1.14E-62 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 SUPERFAMILY SSF81271 6 65 2.14E-14 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 Gene3D G3DSA:3.40.50.800 532 642 4.0E-32 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily BAMF_1949 962450471c899d6b5376c41ab49eb832 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 2.3E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 2.3E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 2.3E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 2.3E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 2.3E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 Gene3D G3DSA:3.10.20.30 5 65 1.8E-20 T 12-10-2018 IPR012675 Beta-grasp domain superfamily BAMF_1949 962450471c899d6b5376c41ab49eb832 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 220 5.8E-15 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 Pfam PF02824 TGS domain 7 64 2.7E-10 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BAMF_1949 962450471c899d6b5376c41ab49eb832 642 Gene3D G3DSA:3.30.980.10 68 224 5.8E-64 T 12-10-2018 BAMF_2732 acfbf1883e705ff8bae34cbeffcad271 438 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 58 5.0E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_2732 acfbf1883e705ff8bae34cbeffcad271 438 Pfam PF00571 CBS domain 253 307 1.5E-8 T 12-10-2018 IPR000644 CBS domain BAMF_2732 acfbf1883e705ff8bae34cbeffcad271 438 Pfam PF00571 CBS domain 191 244 2.3E-6 T 12-10-2018 IPR000644 CBS domain BAMF_2732 acfbf1883e705ff8bae34cbeffcad271 438 SUPERFAMILY SSF54637 334 425 1.23E-16 T 12-10-2018 IPR029069 HotDog domain superfamily BAMF_2732 acfbf1883e705ff8bae34cbeffcad271 438 SUPERFAMILY SSF54631 182 306 1.77E-30 T 12-10-2018 BAMF_2732 acfbf1883e705ff8bae34cbeffcad271 438 Gene3D G3DSA:3.40.1390.20 70 178 7.8E-26 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BAMF_2732 acfbf1883e705ff8bae34cbeffcad271 438 Pfam PF07085 DRTGG domain 76 178 2.1E-28 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BAMF_2732 acfbf1883e705ff8bae34cbeffcad271 438 SUPERFAMILY SSF46785 5 54 3.36E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2732 acfbf1883e705ff8bae34cbeffcad271 438 Gene3D G3DSA:3.10.580.10 186 311 1.5E-24 T 12-10-2018 BAMF_2732 acfbf1883e705ff8bae34cbeffcad271 438 Gene3D G3DSA:1.10.10.10 5 69 2.0E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2732 acfbf1883e705ff8bae34cbeffcad271 438 Gene3D G3DSA:3.10.129.10 312 433 2.6E-9 T 12-10-2018 BAMF_2732 acfbf1883e705ff8bae34cbeffcad271 438 SMART SM00116 200 248 0.5 T 12-10-2018 IPR000644 CBS domain BAMF_2732 acfbf1883e705ff8bae34cbeffcad271 438 SMART SM00116 259 307 2.1E-8 T 12-10-2018 IPR000644 CBS domain BAMF_2732 acfbf1883e705ff8bae34cbeffcad271 438 SUPERFAMILY SSF75138 72 185 7.72E-29 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BAMF_2732 acfbf1883e705ff8bae34cbeffcad271 438 Pfam PF03061 Thioesterase superfamily 352 424 1.4E-9 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 706 720 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 Gene3D G3DSA:1.10.1030.10 411 547 6.0E-42 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 Gene3D G3DSA:3.30.470.20 664 923 1.8E-81 T 12-10-2018 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 SUPERFAMILY SSF56059 670 924 1.08E-75 T 12-10-2018 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 988 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 SUPERFAMILY SSF48108 394 547 1.24E-44 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.7E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.7E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.7E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.7E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 6.7E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.7E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 6.7E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 Gene3D G3DSA:3.40.50.20 551 659 3.6E-43 T 12-10-2018 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 426 542 2.3E-39 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 SUPERFAMILY SSF52440 554 672 2.01E-45 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 833 840 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 670 870 1.9E-36 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 1.2E-82 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 SUPERFAMILY SSF52440 1 127 1.25E-47 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 SUPERFAMILY SSF56059 128 399 1.04E-106 T 12-10-2018 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 SMART SM01209 676 840 0.0045 T 12-10-2018 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 Gene3D G3DSA:3.40.50.20 1 116 8.6E-48 T 12-10-2018 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 Gene3D G3DSA:3.30.1490.20 683 750 1.8E-81 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1018 12.418 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 SMART SM01096 420 542 2.4E-62 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1197 3641dec41fc4dcddb9c3f712ea1818e5 1031 Gene3D G3DSA:3.30.470.20 119 401 6.3E-122 T 12-10-2018 BAMF_3619 715b877f916f9a76203d6e2193c8ee96 245 Gene3D G3DSA:3.90.550.10 1 244 6.2E-67 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3619 715b877f916f9a76203d6e2193c8ee96 245 Pfam PF00483 Nucleotidyl transferase 2 231 2.2E-51 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BAMF_3619 715b877f916f9a76203d6e2193c8ee96 245 SUPERFAMILY SSF53448 2 234 5.41E-67 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3521 666f8a03bb65fa27cd39de23c6cc88c3 181 Gene3D G3DSA:1.10.520.20 5 97 1.8E-12 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3521 666f8a03bb65fa27cd39de23c6cc88c3 181 SUPERFAMILY SSF47928 4 105 1.31E-24 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3521 666f8a03bb65fa27cd39de23c6cc88c3 181 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 12-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3521 666f8a03bb65fa27cd39de23c6cc88c3 181 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 6 176 2.3E-58 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3521 666f8a03bb65fa27cd39de23c6cc88c3 181 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 178 19.826 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3521 666f8a03bb65fa27cd39de23c6cc88c3 181 PRINTS PR00125 ATP synthase delta subunit signature 85 99 2.6E-25 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3521 666f8a03bb65fa27cd39de23c6cc88c3 181 PRINTS PR00125 ATP synthase delta subunit signature 74 85 2.6E-25 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3521 666f8a03bb65fa27cd39de23c6cc88c3 181 PRINTS PR00125 ATP synthase delta subunit signature 136 151 2.6E-25 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3521 666f8a03bb65fa27cd39de23c6cc88c3 181 PRINTS PR00125 ATP synthase delta subunit signature 6 25 2.6E-25 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3521 666f8a03bb65fa27cd39de23c6cc88c3 181 PRINTS PR00125 ATP synthase delta subunit signature 151 169 2.6E-25 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3521 666f8a03bb65fa27cd39de23c6cc88c3 181 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 176 9.3E-48 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_2310 25b2d34cde4b7ea9aac69086f530f321 475 SUPERFAMILY SSF103378 7 473 6.15E-155 T 12-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 BAMF_2310 25b2d34cde4b7ea9aac69086f530f321 475 Pfam PF03972 MmgE/PrpD family 12 455 7.2E-150 T 12-10-2018 IPR005656 MmgE/PrpD GO:0016829 BAMF_2310 25b2d34cde4b7ea9aac69086f530f321 475 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 8 475 8.7E-256 T 12-10-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 BAMF_2310 25b2d34cde4b7ea9aac69086f530f321 475 Gene3D G3DSA:1.10.4100.10 17 453 1.4E-184 T 12-10-2018 BAMF_2310 25b2d34cde4b7ea9aac69086f530f321 475 Gene3D G3DSA:3.30.1330.120 280 418 1.4E-184 T 12-10-2018 BAMF_3782 d9f465c677172c23723d879c00b83ee3 344 Gene3D G3DSA:3.40.50.720 4 320 3.8E-119 T 12-10-2018 BAMF_3782 d9f465c677172c23723d879c00b83ee3 344 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 125 2.3E-28 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BAMF_3782 d9f465c677172c23723d879c00b83ee3 344 SUPERFAMILY SSF51735 3 154 1.24E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3782 d9f465c677172c23723d879c00b83ee3 344 SUPERFAMILY SSF55347 132 284 2.49E-16 T 12-10-2018 BAMF_3782 d9f465c677172c23723d879c00b83ee3 344 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 239 6.9E-14 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 BAMF_3782 d9f465c677172c23723d879c00b83ee3 344 Gene3D G3DSA:3.30.360.10 144 266 3.8E-119 T 12-10-2018 BAMF_3782 d9f465c677172c23723d879c00b83ee3 344 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 337 51.859 T 12-10-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 BAMF_0516 060cf293deb874078a450a164c1eb440 238 SUPERFAMILY SSF46785 1 70 8.88E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0516 060cf293deb874078a450a164c1eb440 238 Pfam PF07702 UTRA domain 92 228 2.8E-37 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BAMF_0516 060cf293deb874078a450a164c1eb440 238 Gene3D G3DSA:3.40.1410.10 78 233 7.8E-42 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BAMF_0516 060cf293deb874078a450a164c1eb440 238 SMART SM00345 7 66 2.4E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0516 060cf293deb874078a450a164c1eb440 238 SUPERFAMILY SSF64288 82 231 6.75E-46 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BAMF_0516 060cf293deb874078a450a164c1eb440 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 7.1E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0516 060cf293deb874078a450a164c1eb440 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 7.1E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0516 060cf293deb874078a450a164c1eb440 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 1.2E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0516 060cf293deb874078a450a164c1eb440 238 Gene3D G3DSA:1.10.10.10 1 70 2.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0516 060cf293deb874078a450a164c1eb440 238 SMART SM00866 90 229 3.0E-42 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 Gene3D G3DSA:3.30.300.10 394 513 9.3E-53 T 12-10-2018 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 Gene3D G3DSA:3.40.50.620 200 393 5.9E-76 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 513 55.503 T 12-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 Pfam PF00117 Glutamine amidotransferase class-I 11 189 5.6E-46 T 12-10-2018 IPR017926 Glutamine amidotransferase BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 Pfam PF00958 GMP synthase C terminal domain 421 512 5.4E-44 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 195 1.2E-86 T 12-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 Pfam PF02540 NAD synthase 214 284 8.3E-6 T 12-10-2018 IPR022310 NAD/GMP synthase BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 PRINTS PR00097 Anthranilate synthase component II signature 80 91 4.3E-6 T 12-10-2018 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 PRINTS PR00097 Anthranilate synthase component II signature 168 181 4.3E-6 T 12-10-2018 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 PRINTS PR00097 Anthranilate synthase component II signature 53 62 4.3E-6 T 12-10-2018 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 2.7E-6 T 12-10-2018 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 2.7E-6 T 12-10-2018 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 2.7E-6 T 12-10-2018 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 4.9E-8 T 12-10-2018 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 4.9E-8 T 12-10-2018 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 4.9E-8 T 12-10-2018 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 Gene3D G3DSA:3.40.50.880 3 196 4.3E-58 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 SUPERFAMILY SSF52317 7 228 1.27E-60 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 203 513 9.6E-160 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 SUPERFAMILY SSF54810 393 513 4.58E-51 T 12-10-2018 BAMF_0628 efae2e7ee1e8f7ca5d0ee194cbe2b91e 513 SUPERFAMILY SSF52402 188 406 2.21E-62 T 12-10-2018 BAMF_2401 e740baa911c49d80c47a54711d67659e 201 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2401 e740baa911c49d80c47a54711d67659e 201 PIRSF PIRSF000349 1 201 3.7E-86 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2401 e740baa911c49d80c47a54711d67659e 201 Gene3D G3DSA:2.40.500.20 90 201 5.3E-53 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2401 e740baa911c49d80c47a54711d67659e 201 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 5.0E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2401 e740baa911c49d80c47a54711d67659e 201 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 5.0E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2401 e740baa911c49d80c47a54711d67659e 201 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 5.0E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2401 e740baa911c49d80c47a54711d67659e 201 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.0E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2401 e740baa911c49d80c47a54711d67659e 201 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.0E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2401 e740baa911c49d80c47a54711d67659e 201 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 194 2.0E-43 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2401 e740baa911c49d80c47a54711d67659e 201 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 4.4E-35 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2401 e740baa911c49d80c47a54711d67659e 201 Gene3D G3DSA:1.10.287.990 20 89 4.1E-31 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2401 e740baa911c49d80c47a54711d67659e 201 SUPERFAMILY SSF54719 91 200 6.81E-49 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2401 e740baa911c49d80c47a54711d67659e 201 SUPERFAMILY SSF46609 1 90 1.96E-37 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_1657 2f703fad4e0daef91fa10d5371c7703a 220 Pfam PF01842 ACT domain 149 210 1.1E-8 T 12-10-2018 IPR002912 ACT domain BAMF_1657 2f703fad4e0daef91fa10d5371c7703a 220 SUPERFAMILY SSF143548 19 137 2.35E-32 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BAMF_1657 2f703fad4e0daef91fa10d5371c7703a 220 SUPERFAMILY SSF55021 137 217 7.63E-16 T 12-10-2018 BAMF_1657 2f703fad4e0daef91fa10d5371c7703a 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 206 7.2E-111 T 12-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BAMF_1657 2f703fad4e0daef91fa10d5371c7703a 220 PIRSF PIRSF036692 1 220 3.2E-103 T 12-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BAMF_1657 2f703fad4e0daef91fa10d5371c7703a 220 Gene3D G3DSA:3.30.70.260 139 217 3.6E-14 T 12-10-2018 BAMF_1657 2f703fad4e0daef91fa10d5371c7703a 220 Gene3D G3DSA:3.30.1330.90 13 136 3.5E-22 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BAMF_1657 2f703fad4e0daef91fa10d5371c7703a 220 Pfam PF03315 Serine dehydratase beta chain 5 73 1.0E-12 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BAMF_1766 c282d6b8588d9e70c1a3bb8c779c8cc7 347 Pfam PF00154 recA bacterial DNA recombination protein 7 267 3.1E-147 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BAMF_1766 c282d6b8588d9e70c1a3bb8c779c8cc7 347 Gene3D G3DSA:3.40.50.300 25 266 1.0E-81 T 12-10-2018 BAMF_1766 c282d6b8588d9e70c1a3bb8c779c8cc7 347 SMART SM00382 56 227 7.6E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1766 c282d6b8588d9e70c1a3bb8c779c8cc7 347 SUPERFAMILY SSF52540 3 266 1.77E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1766 c282d6b8588d9e70c1a3bb8c779c8cc7 347 SUPERFAMILY SSF54752 267 326 9.42E-22 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal BAMF_1766 c282d6b8588d9e70c1a3bb8c779c8cc7 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 3 323 3.9E-177 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BAMF_1766 c282d6b8588d9e70c1a3bb8c779c8cc7 347 ProSitePatterns PS00321 recA signature. 212 220 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 BAMF_1766 c282d6b8588d9e70c1a3bb8c779c8cc7 347 PRINTS PR00142 RecA protein signature 296 313 3.8E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BAMF_1766 c282d6b8588d9e70c1a3bb8c779c8cc7 347 PRINTS PR00142 RecA protein signature 92 121 3.8E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BAMF_1766 c282d6b8588d9e70c1a3bb8c779c8cc7 347 PRINTS PR00142 RecA protein signature 209 237 3.8E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BAMF_1766 c282d6b8588d9e70c1a3bb8c779c8cc7 347 PRINTS PR00142 RecA protein signature 242 271 3.8E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BAMF_1766 c282d6b8588d9e70c1a3bb8c779c8cc7 347 PRINTS PR00142 RecA protein signature 126 155 3.8E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BAMF_1766 c282d6b8588d9e70c1a3bb8c779c8cc7 347 PRINTS PR00142 RecA protein signature 164 193 3.8E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BAMF_1766 c282d6b8588d9e70c1a3bb8c779c8cc7 347 Gene3D G3DSA:3.30.250.10 267 345 1.2E-29 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal BAMF_1766 c282d6b8588d9e70c1a3bb8c779c8cc7 347 Hamap MF_00268 Protein RecA [recA]. 4 328 53.131 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BAMF_0036 06825da67aec72ab3b7822f1d0148578 293 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 16 234 36.021 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BAMF_0036 06825da67aec72ab3b7822f1d0148578 293 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 94 105 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 BAMF_0036 06825da67aec72ab3b7822f1d0148578 293 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 16 290 1.1E-82 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BAMF_0036 06825da67aec72ab3b7822f1d0148578 293 Gene3D G3DSA:3.30.950.10 124 239 2.8E-42 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BAMF_0036 06825da67aec72ab3b7822f1d0148578 293 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 17 215 1.4E-29 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BAMF_0036 06825da67aec72ab3b7822f1d0148578 293 SUPERFAMILY SSF53790 14 232 1.44E-80 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BAMF_0036 06825da67aec72ab3b7822f1d0148578 293 PIRSF PIRSF005917 4 293 7.0E-103 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BAMF_0036 06825da67aec72ab3b7822f1d0148578 293 Gene3D G3DSA:3.40.1010.10 3 123 2.1E-45 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 Pfam PF00501 AMP-binding enzyme 1266 1662 6.2E-71 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 Pfam PF00501 AMP-binding enzyme 216 605 1.9E-50 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 Gene3D G3DSA:3.30.300.30 601 710 3.9E-15 T 12-10-2018 BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 Pfam PF00550 Phosphopantetheine attachment site 716 774 3.6E-8 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 Pfam PF00550 Phosphopantetheine attachment site 1770 1835 9.1E-8 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 Gene3D G3DSA:3.30.559.30 981 1231 5.0E-74 T 12-10-2018 BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1282 1686 7.0E-98 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 SUPERFAMILY SSF47336 1767 1839 3.14E-9 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 Gene3D G3DSA:3.40.50.12780 1256 1655 2.3E-87 T 12-10-2018 BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 Gene3D G3DSA:1.10.1200.10 711 783 9.2E-10 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 Gene3D G3DSA:3.40.50.12780 206 597 1.7E-63 T 12-10-2018 BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 Gene3D G3DSA:3.30.300.30 1658 1759 2.3E-22 T 12-10-2018 BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 Gene3D G3DSA:1.10.1200.10 1760 1841 2.1E-8 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 ProSitePatterns PS00455 Putative AMP-binding domain signature. 358 369 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 SUPERFAMILY SSF56801 1238 1756 1.1E-113 T 12-10-2018 BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 Gene3D G3DSA:3.30.559.10 795 979 1.4E-45 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 Pfam PF13193 AMP-binding enzyme C-terminal domain 1671 1744 4.0E-6 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 SUPERFAMILY SSF52777 806 976 6.67E-20 T 12-10-2018 BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 Pfam PF00668 Condensation domain 803 1225 1.7E-39 T 12-10-2018 IPR001242 Condensation domain BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 SUPERFAMILY SSF47336 708 774 8.64E-10 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 SUPERFAMILY SSF56801 196 720 5.1E-82 T 12-10-2018 BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1401 1412 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_2481 e4e897c2fd1d8386af162136221dd9b5 1842 SUPERFAMILY SSF52777 985 1229 5.11E-41 T 12-10-2018 BAMF_2801 3f641b9b805a29476e18bc98fb928ff0 73 SUPERFAMILY SSF46785 11 59 2.61E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2801 3f641b9b805a29476e18bc98fb928ff0 73 Pfam PF08220 DeoR-like helix-turn-helix domain 11 54 5.8E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_2801 3f641b9b805a29476e18bc98fb928ff0 73 SMART SM00420 11 56 0.0044 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_2801 3f641b9b805a29476e18bc98fb928ff0 73 Gene3D G3DSA:1.10.10.10 10 71 1.1E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2178 b3f4fed5488a8a29f642a33bb3f1cb18 75 SUPERFAMILY SSF51219 7 74 3.4E-36 T 12-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily BAMF_2178 b3f4fed5488a8a29f642a33bb3f1cb18 75 Pfam PF02081 Tryptophan RNA-binding attenuator protein 6 73 5.0E-40 T 12-10-2018 IPR023558 Tryptophan RNA-binding attenuator protein domain BAMF_2178 b3f4fed5488a8a29f642a33bb3f1cb18 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 58 74 5.0E-40 T 12-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 BAMF_2178 b3f4fed5488a8a29f642a33bb3f1cb18 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 42 58 5.0E-40 T 12-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 BAMF_2178 b3f4fed5488a8a29f642a33bb3f1cb18 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 9 26 5.0E-40 T 12-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 BAMF_2178 b3f4fed5488a8a29f642a33bb3f1cb18 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 26 42 5.0E-40 T 12-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 BAMF_2178 b3f4fed5488a8a29f642a33bb3f1cb18 75 Hamap MF_00798 Transcription attenuation protein MtrB [mtrB]. 1 73 29.735 T 12-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 BAMF_2178 b3f4fed5488a8a29f642a33bb3f1cb18 75 Gene3D G3DSA:2.60.40.50 1 75 1.9E-44 T 12-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.559.10 1321 1691 8.5E-132 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF56801 1738 2293 4.45E-155 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF52777 2545 2792 2.78E-42 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF52777 2354 2532 1.11E-34 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1918 1929 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF52777 852 1026 3.67E-34 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF52777 5 255 1.67E-20 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF52777 1032 1285 1.45E-40 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.559.30 2528 2795 8.6E-73 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.559.30 1017 1286 2.9E-71 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF00550 Phosphopantetheine attachment site 4839 4903 7.5E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF00550 Phosphopantetheine attachment site 772 831 2.3E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF00550 Phosphopantetheine attachment site 3803 3866 1.4E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF00550 Phosphopantetheine attachment site 2284 2345 2.2E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF52777 3007 3251 8.34E-55 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SMART SM00823 Phosphopantetheine attachment site 3801 3870 0.012 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SMART SM00823 Phosphopantetheine attachment site 770 838 0.16 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SMART SM00823 Phosphopantetheine attachment site 2281 2349 0.006 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SMART SM00823 Phosphopantetheine attachment site 4838 4907 0.011 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF47336 4830 4904 5.5E-19 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.559.10 4924 5282 1.0E-141 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF47336 3793 3866 2.22E-18 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.559.10 837 1016 1.2E-58 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.559.10 2349 2527 7.5E-60 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF56801 4295 4851 1.96E-143 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF47336 2273 2345 8.24E-16 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.559.30 3008 3264 1.4E-137 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF56801 3246 3814 2.35E-147 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1154 1305 5.8E-44 T 12-10-2018 IPR010060 Non-ribosomal peptide synthase BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2665 2813 8.6E-49 T 12-10-2018 IPR010060 Non-ribosomal peptide synthase BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF47336 762 834 5.89E-16 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.559.30 5092 5338 1.0E-141 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.40.50.12780 3280 3686 8.2E-127 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.40.50.12780 256 656 5.8E-136 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.40.50.12780 1768 2167 5.7E-135 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2305 2320 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.559.10 2829 3199 1.4E-137 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 ProSitePatterns PS00455 Putative AMP-binding domain signature. 408 419 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3825 3840 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4474 4485 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF52777 1321 1498 3.34E-41 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4356 4754 3.8E-127 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3309 3717 1.9E-125 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1800 2197 1.6E-142 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 290 686 4.3E-135 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.300.30 3687 3791 5.0E-30 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.300.30 657 759 8.5E-31 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.300.30 4724 4825 1.3E-31 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.559.30 4055 4300 4.0E-148 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.559.30 1500 1756 8.5E-132 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.559.10 3887 4245 4.0E-148 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF52777 3885 4069 4.34E-41 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF52777 2821 3022 9.45E-43 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4862 4877 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.300.30 2168 2268 1.3E-31 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF00668 Condensation domain 5 249 9.1E-18 T 12-10-2018 IPR001242 Condensation domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF00668 Condensation domain 1316 1760 3.7E-120 T 12-10-2018 IPR001242 Condensation domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF00668 Condensation domain 3885 4315 1.0E-129 T 12-10-2018 IPR001242 Condensation domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF00668 Condensation domain 2358 2799 3.5E-103 T 12-10-2018 IPR001242 Condensation domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF00668 Condensation domain 4920 5350 3.4E-122 T 12-10-2018 IPR001242 Condensation domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF00668 Condensation domain 849 1291 1.8E-104 T 12-10-2018 IPR001242 Condensation domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF00668 Condensation domain 2824 3268 6.0E-121 T 12-10-2018 IPR001242 Condensation domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF52777 5094 5339 1.22E-56 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF00501 AMP-binding enzyme 269 662 6.6E-104 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF00501 AMP-binding enzyme 4335 4730 3.0E-89 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF00501 AMP-binding enzyme 3288 3692 3.9E-97 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF00501 AMP-binding enzyme 1779 2173 6.8E-101 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.30.559.30 5 255 4.7E-24 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF52777 4057 4304 3.67E-62 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF56801 230 782 7.2E-161 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF13193 AMP-binding enzyme C-terminal domain 4738 4811 3.4E-9 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF13193 AMP-binding enzyme C-terminal domain 3701 3774 5.0E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF13193 AMP-binding enzyme C-terminal domain 2181 2254 2.2E-8 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Pfam PF13193 AMP-binding enzyme C-terminal domain 670 743 2.7E-8 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 ProSitePatterns PS00012 Phosphopantetheine attachment site. 794 809 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:3.40.50.12780 4326 4722 5.9E-123 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF52777 4920 5083 4.22E-41 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 SUPERFAMILY SSF52777 1499 1743 5.23E-50 T 12-10-2018 BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:1.10.1200.10 2269 2348 5.0E-21 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:1.10.1200.10 3792 3873 4.8E-25 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:1.10.1200.10 4827 4910 3.0E-24 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1912 f892eb3ab76085c9f6ffae4d25a26cee 5361 Gene3D G3DSA:1.10.1200.10 760 836 2.1E-19 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1978 81b60b6849cc6413716588c1b21f2fc1 110 Pfam PF01588 Putative tRNA binding domain 12 108 1.2E-17 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BAMF_1978 81b60b6849cc6413716588c1b21f2fc1 110 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 5 109 1.1E-47 T 12-10-2018 IPR008231 Probable chaperone CsaA BAMF_1978 81b60b6849cc6413716588c1b21f2fc1 110 Gene3D G3DSA:2.40.50.140 2 110 9.4E-33 T 12-10-2018 BAMF_1978 81b60b6849cc6413716588c1b21f2fc1 110 SUPERFAMILY SSF50249 4 109 1.52E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_1179 c936a36f271fecac76e0d33031f11e4f 551 SMART SM00304 193 246 4.2E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_1179 c936a36f271fecac76e0d33031f11e4f 551 SMART SM00283 275 550 2.0E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_1179 c936a36f271fecac76e0d33031f11e4f 551 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 485 3.0E-28 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_1179 c936a36f271fecac76e0d33031f11e4f 551 Gene3D G3DSA:1.10.287.950 249 550 3.1E-55 T 12-10-2018 BAMF_1179 c936a36f271fecac76e0d33031f11e4f 551 SUPERFAMILY SSF58104 218 549 2.49E-58 T 12-10-2018 BAMF_1179 c936a36f271fecac76e0d33031f11e4f 551 Gene3D G3DSA:1.20.1480.50 154 248 2.4E-11 T 12-10-2018 BAMF_1179 c936a36f271fecac76e0d33031f11e4f 551 Pfam PF00672 HAMP domain 195 242 7.6E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_0775 90d768b64fd73edfec51344d2b2488bc 466 Gene3D G3DSA:3.40.50.150 90 457 2.5E-113 T 12-10-2018 BAMF_0775 90d768b64fd73edfec51344d2b2488bc 466 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 455 1.3E-199 T 12-10-2018 BAMF_0775 90d768b64fd73edfec51344d2b2488bc 466 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 445 455 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site BAMF_0775 90d768b64fd73edfec51344d2b2488bc 466 Gene3D G3DSA:2.40.50.140 3 88 5.2E-25 T 12-10-2018 BAMF_0775 90d768b64fd73edfec51344d2b2488bc 466 SUPERFAMILY SSF50249 6 68 1.2E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_0775 90d768b64fd73edfec51344d2b2488bc 466 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 394 425 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site BAMF_0775 90d768b64fd73edfec51344d2b2488bc 466 SUPERFAMILY SSF53335 77 460 3.1E-78 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_0775 90d768b64fd73edfec51344d2b2488bc 466 Pfam PF01938 TRAM domain 13 67 2.4E-11 T 12-10-2018 IPR002792 TRAM domain BAMF_0775 90d768b64fd73edfec51344d2b2488bc 466 Gene3D G3DSA:3.40.1350.30 139 295 2.5E-113 T 12-10-2018 BAMF_0775 90d768b64fd73edfec51344d2b2488bc 466 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 219 457 7.6E-20 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 BAMF_1745 74c5d057bb32fe4b46e8ffe1de942026 296 SUPERFAMILY SSF51735 133 269 7.58E-18 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1745 74c5d057bb32fe4b46e8ffe1de942026 296 Gene3D G3DSA:3.40.50.720 7 288 1.1E-107 T 12-10-2018 BAMF_1745 74c5d057bb32fe4b46e8ffe1de942026 296 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 152 293 1.4E-9 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BAMF_1745 74c5d057bb32fe4b46e8ffe1de942026 296 Gene3D G3DSA:3.40.50.720 126 272 1.1E-107 T 12-10-2018 BAMF_1745 74c5d057bb32fe4b46e8ffe1de942026 296 TIGRFAM TIGR02853 spore_dpaA: dipicolinic acid synthetase, A subunit 5 289 6.9E-136 T 12-10-2018 IPR014215 Dipicolinic acid synthetase subunit A BAMF_1745 74c5d057bb32fe4b46e8ffe1de942026 296 Pfam PF16924 Dipicolinate synthase subunit A N-terminal domain 6 123 1.2E-28 T 12-10-2018 IPR031629 Dipicolinate synthase subunit A, N-terminal BAMF_0748 6c16d3e66016e8642d8866aa94581fba 238 SUPERFAMILY SSF64288 75 234 3.77E-42 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BAMF_0748 6c16d3e66016e8642d8866aa94581fba 238 Pfam PF07702 UTRA domain 91 229 3.2E-34 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BAMF_0748 6c16d3e66016e8642d8866aa94581fba 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 8.5E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0748 6c16d3e66016e8642d8866aa94581fba 238 SUPERFAMILY SSF46785 3 77 3.96E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0748 6c16d3e66016e8642d8866aa94581fba 238 SMART SM00345 9 68 1.2E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0748 6c16d3e66016e8642d8866aa94581fba 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0748 6c16d3e66016e8642d8866aa94581fba 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0748 6c16d3e66016e8642d8866aa94581fba 238 Gene3D G3DSA:1.10.10.10 1 69 6.2E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0748 6c16d3e66016e8642d8866aa94581fba 238 Gene3D G3DSA:3.40.1410.10 88 228 8.0E-33 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BAMF_0748 6c16d3e66016e8642d8866aa94581fba 238 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 5 236 2.3E-101 T 12-10-2018 IPR012770 Trehalose operon transcriptional repressor BAMF_0748 6c16d3e66016e8642d8866aa94581fba 238 SMART SM00866 90 229 3.1E-33 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BAMF_1921 5886a26555ed4f7a1dcaabb754df4375 233 PIRSF PIRSF006755 1 230 4.4E-73 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BAMF_1921 5886a26555ed4f7a1dcaabb754df4375 233 Pfam PF13500 AAA domain 2 210 3.1E-50 T 12-10-2018 BAMF_1921 5886a26555ed4f7a1dcaabb754df4375 233 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 172 3.5E-60 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BAMF_1921 5886a26555ed4f7a1dcaabb754df4375 233 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 210 29.833 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 BAMF_1921 5886a26555ed4f7a1dcaabb754df4375 233 Gene3D G3DSA:3.40.50.300 2 223 1.2E-63 T 12-10-2018 BAMF_1921 5886a26555ed4f7a1dcaabb754df4375 233 SUPERFAMILY SSF52540 1 215 2.13E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0002 8faed47b271a64071cac5ea35f5bb6e5 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 136 251 1.1E-40 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 BAMF_0002 8faed47b271a64071cac5ea35f5bb6e5 378 SUPERFAMILY SSF55979 1 127 3.59E-23 T 12-10-2018 BAMF_0002 8faed47b271a64071cac5ea35f5bb6e5 378 SUPERFAMILY SSF55979 134 251 9.78E-28 T 12-10-2018 BAMF_0002 8faed47b271a64071cac5ea35f5bb6e5 378 SMART SM00480 17 373 2.0E-182 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BAMF_0002 8faed47b271a64071cac5ea35f5bb6e5 378 Gene3D G3DSA:3.10.150.10 1 250 2.5E-142 T 12-10-2018 BAMF_0002 8faed47b271a64071cac5ea35f5bb6e5 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 127 1.3E-41 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 BAMF_0002 8faed47b271a64071cac5ea35f5bb6e5 378 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 376 7.5E-40 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 BAMF_0002 8faed47b271a64071cac5ea35f5bb6e5 378 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 377 2.9E-137 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BAMF_0002 8faed47b271a64071cac5ea35f5bb6e5 378 Gene3D G3DSA:3.70.10.10 145 375 2.5E-142 T 12-10-2018 BAMF_0002 8faed47b271a64071cac5ea35f5bb6e5 378 SUPERFAMILY SSF55979 254 377 8.85E-31 T 12-10-2018 BAMF_0002 8faed47b271a64071cac5ea35f5bb6e5 378 PIRSF PIRSF000804 1 378 1.9E-116 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BAMF_1092 e539a7901619b4e414aee8d6441b99c1 203 Gene3D G3DSA:1.10.10.10 1 167 1.3E-47 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1092 e539a7901619b4e414aee8d6441b99c1 203 Pfam PF01047 MarR family 44 101 7.8E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1092 e539a7901619b4e414aee8d6441b99c1 203 SUPERFAMILY SSF46785 20 131 1.44E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1092 e539a7901619b4e414aee8d6441b99c1 203 Hamap MF_01911 HTH-type transcriptional regulator Hpr [hpr]. 2 185 49.002 T 12-10-2018 IPR023488 HTH-type transcriptional regulator Hpr BAMF_1092 e539a7901619b4e414aee8d6441b99c1 203 ProSitePatterns PS01117 MarR-type HTH domain signature. 76 110 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BAMF_1092 e539a7901619b4e414aee8d6441b99c1 203 SMART SM00347 37 137 2.5E-23 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3329 f455b39a8d99cff9ab2b7fcda66ccee5 353 Pfam PF00512 His Kinase A (phospho-acceptor) domain 129 192 1.3E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_3329 f455b39a8d99cff9ab2b7fcda66ccee5 353 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 238 346 3.8E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3329 f455b39a8d99cff9ab2b7fcda66ccee5 353 Gene3D G3DSA:3.30.565.10 189 346 3.8E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3329 f455b39a8d99cff9ab2b7fcda66ccee5 353 SMART SM00388 128 194 9.5E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_3329 f455b39a8d99cff9ab2b7fcda66ccee5 353 Gene3D G3DSA:1.10.287.130 76 188 1.2E-21 T 12-10-2018 BAMF_3329 f455b39a8d99cff9ab2b7fcda66ccee5 353 SUPERFAMILY SSF55874 184 347 1.23E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3329 f455b39a8d99cff9ab2b7fcda66ccee5 353 SUPERFAMILY SSF47384 111 193 1.18E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_3329 f455b39a8d99cff9ab2b7fcda66ccee5 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 293 303 1.2E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3329 f455b39a8d99cff9ab2b7fcda66ccee5 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 275 289 1.2E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3329 f455b39a8d99cff9ab2b7fcda66ccee5 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 326 1.2E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3329 f455b39a8d99cff9ab2b7fcda66ccee5 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 345 1.2E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3329 f455b39a8d99cff9ab2b7fcda66ccee5 353 SMART SM00387 238 348 2.0E-41 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2108 a14e0e3b9f8c73bc9d3f5e077ecbba5f 102 Gene3D G3DSA:1.10.10.10 1 102 1.8E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2108 a14e0e3b9f8c73bc9d3f5e077ecbba5f 102 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 3 83 3.2E-22 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BAMF_2108 a14e0e3b9f8c73bc9d3f5e077ecbba5f 102 SUPERFAMILY SSF46767 3 84 4.32E-20 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 BAMF_1918 8114ef493a2d3a010be865bb9cdfe311 233 Pfam PF01144 Coenzyme A transferase 9 217 1.8E-73 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BAMF_1918 8114ef493a2d3a010be865bb9cdfe311 233 SUPERFAMILY SSF100950 5 229 1.2E-86 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BAMF_1918 8114ef493a2d3a010be865bb9cdfe311 233 SMART SM00882 7 218 9.3E-91 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BAMF_1918 8114ef493a2d3a010be865bb9cdfe311 233 Gene3D G3DSA:3.40.1080.10 2 228 1.9E-100 T 12-10-2018 BAMF_1918 8114ef493a2d3a010be865bb9cdfe311 233 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 5 218 6.4E-78 T 12-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 BAMF_1918 8114ef493a2d3a010be865bb9cdfe311 233 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 19 34 - T 12-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SUPERFAMILY SSF53901 2576 3009 5.77E-91 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SUPERFAMILY SSF51735 2183 2413 3.86E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SMART SM01294 2456 2522 3.9E-6 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SMART SM01294 3932 4002 5.4E-7 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.10.129.120 1837 1996 3.7E-41 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF13193 AMP-binding enzyme C-terminal domain 907 980 2.2E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.40.47.10 1108 1691 3.6E-195 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:1.10.1200.10 2448 2529 7.3E-20 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.10.129.110 4679 4958 1.9E-81 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.10.129.110 3206 3486 2.6E-77 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 516 921 1.5E-131 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SMART SM00826 1705 1870 2.1E-5 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SMART SM00826 3200 3364 1.2E-24 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SMART SM00826 4673 4840 2.1E-7 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SUPERFAMILY SSF47336 1003 1074 4.32E-15 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SUPERFAMILY SSF53901 4053 4487 4.78E-91 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SUPERFAMILY SSF56801 483 1020 1.31E-151 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.40.47.10 4058 4652 1.7E-241 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.40.50.720 3487 3907 5.6E-143 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.40.50.720 2004 2428 9.3E-146 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.30.300.30 892 994 4.7E-32 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.30.559.30 212 462 1.5E-110 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF00501 AMP-binding enzyme 495 898 8.8E-105 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:1.10.1200.10 996 1081 1.5E-19 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SUPERFAMILY SSF47336 3934 4069 1.57E-16 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.30.70.3050 3063 3158 3.1E-252 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.30.70.3050 4537 4633 1.7E-241 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF00668 Condensation domain 34 462 4.7E-105 T 12-10-2018 IPR001242 Condensation domain BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SUPERFAMILY SSF51735 4986 5158 4.28E-19 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SUPERFAMILY SSF51735 5169 5387 1.33E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.30.559.10 35 408 1.5E-110 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 4310 4434 2.7E-40 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2834 2955 1.2E-40 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1363 1481 6.0E-39 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF08659 KR domain 3665 3850 7.1E-57 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF08659 KR domain 5171 5349 6.0E-40 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF08659 KR domain 2186 2371 1.7E-51 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.40.50.720 4959 5408 2.4E-85 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1032 1047 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SUPERFAMILY SSF51735 3661 3889 6.95E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF14765 Polyketide synthase dehydratase 4673 4955 1.4E-59 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF14765 Polyketide synthase dehydratase 3200 3481 1.1E-63 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF14765 Polyketide synthase dehydratase 1705 1996 8.4E-47 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:1.10.1200.10 3927 4011 1.2E-22 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SUPERFAMILY SSF53901 1105 1530 7.44E-72 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.40.47.10 2580 3177 3.1E-252 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.10.129.10 1698 1822 1.0E-22 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SUPERFAMILY SSF47336 2453 2592 3.66E-14 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2578 2826 9.8E-91 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1106 1355 6.0E-61 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4056 4302 2.6E-87 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SUPERFAMILY SSF52777 217 462 3.45E-48 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2959 3072 5.9E-15 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 4438 4556 7.5E-16 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1484 1598 9.3E-15 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.30.70.3050 1581 1670 3.6E-195 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 ProSitePatterns PS00455 Putative AMP-binding domain signature. 637 648 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SMART SM00825 Beta-ketoacyl synthase 4058 4493 4.3E-187 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SMART SM00825 Beta-ketoacyl synthase 1108 1534 4.2E-139 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SMART SM00825 Beta-ketoacyl synthase 2580 3014 4.8E-200 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SMART SM00823 Phosphopantetheine attachment site 2455 2526 7.6E-13 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SMART SM00823 Phosphopantetheine attachment site 1008 1077 8.2E-4 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SMART SM00823 Phosphopantetheine attachment site 3935 4006 1.6E-16 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SUPERFAMILY SSF52777 36 208 5.56E-34 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2739 2755 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 4215 4231 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2186 2372 6.6E-44 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3665 3851 6.4E-55 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5171 5351 4.1E-33 T 12-10-2018 BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF00550 Phosphopantetheine attachment site 2458 2521 9.8E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF00550 Phosphopantetheine attachment site 3938 4002 2.0E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Pfam PF00550 Phosphopantetheine attachment site 1010 1073 1.4E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1789 862025809f8a9ffc7aa8443f7f43cc48 5437 Gene3D G3DSA:3.40.50.12780 484 890 1.3E-135 T 12-10-2018 BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 SMART SM00387 488 602 1.4E-43 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 Gene3D G3DSA:1.10.287.130 368 447 2.2E-29 T 12-10-2018 BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 Gene3D G3DSA:3.30.450.20 271 367 9.2E-22 T 12-10-2018 BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 SUPERFAMILY SSF55874 432 600 2.1E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 SMART SM00304 204 256 9.1E-14 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 SUPERFAMILY SSF47384 362 443 1.63E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 SMART SM00388 376 443 1.1E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 SUPERFAMILY SSF103190 52 177 2.75E-6 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 Gene3D G3DSA:3.30.450.20 32 182 4.0E-39 T 12-10-2018 BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 Pfam PF00512 His Kinase A (phospho-acceptor) domain 377 442 4.9E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 489 600 7.3E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 Gene3D G3DSA:1.10.8.500 203 255 7.8E-9 T 12-10-2018 BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 Pfam PF13426 PAS domain 274 369 9.5E-8 T 12-10-2018 IPR000014 PAS domain BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 Pfam PF00672 HAMP domain 204 252 3.1E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 SMART SM00091 263 329 1.4E-5 T 12-10-2018 IPR000014 PAS domain BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 SUPERFAMILY SSF55785 250 368 1.31E-10 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 SUPERFAMILY SSF158472 204 253 8.24E-10 T 12-10-2018 BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 555 4.9E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 4.9E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 541 4.9E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 4.9E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3858 76d7d719bafdc556d0f2c35c040f55e7 611 Gene3D G3DSA:3.30.565.10 450 601 1.0E-50 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 289 1.3E-103 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 Gene3D G3DSA:3.40.50.1370 7 285 2.5E-107 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 291 39.074 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 242 251 7.4E-23 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 7.4E-23 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 7.4E-23 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 277 7.4E-23 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 Gene3D G3DSA:3.40.50.1370 127 268 2.5E-107 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 SUPERFAMILY SSF53671 1 289 2.36E-91 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 207 216 1.5E-34 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 1.5E-34 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 126 143 1.5E-34 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 270 284 1.5E-34 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 71 80 1.5E-34 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 PRINTS PR00101 Aspartate carbamoyltransferase signature 246 251 1.5E-34 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 43 50 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 146 285 7.4E-23 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BAMF_1620 71f46ab2c196c171c0578c8397b69bc0 304 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 140 9.4E-43 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BAMF_2372 406e713d6ca6fa46da98668f3331bf77 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 31 3.5E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site BAMF_2372 406e713d6ca6fa46da98668f3331bf77 145 PIRSF PIRSF021292 6 145 2.8E-38 T 12-10-2018 IPR016785 ComG operon protein 4 GO:0030420 BAMF_2372 406e713d6ca6fa46da98668f3331bf77 145 SUPERFAMILY SSF54523 11 80 1.8E-5 T 12-10-2018 BAMF_2372 406e713d6ca6fa46da98668f3331bf77 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 7.8E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site BAMF_0254 6cec63c4b559e79498bc00011e609bd6 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 1.8E-66 T 12-10-2018 BAMF_0254 6cec63c4b559e79498bc00011e609bd6 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_0254 6cec63c4b559e79498bc00011e609bd6 259 Gene3D G3DSA:3.40.50.720 1 257 7.4E-83 T 12-10-2018 BAMF_0254 6cec63c4b559e79498bc00011e609bd6 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0254 6cec63c4b559e79498bc00011e609bd6 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0254 6cec63c4b559e79498bc00011e609bd6 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0254 6cec63c4b559e79498bc00011e609bd6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.0E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0254 6cec63c4b559e79498bc00011e609bd6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.0E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0254 6cec63c4b559e79498bc00011e609bd6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.0E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0254 6cec63c4b559e79498bc00011e609bd6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.0E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0254 6cec63c4b559e79498bc00011e609bd6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.0E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0254 6cec63c4b559e79498bc00011e609bd6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.0E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0254 6cec63c4b559e79498bc00011e609bd6 259 SUPERFAMILY SSF51735 6 253 1.83E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1120 9c38402bfe10cda39c649386d4433c10 286 Gene3D G3DSA:3.40.50.1980 116 283 2.0E-34 T 12-10-2018 BAMF_1120 9c38402bfe10cda39c649386d4433c10 286 SUPERFAMILY SSF53807 28 276 6.28E-47 T 12-10-2018 BAMF_1120 9c38402bfe10cda39c649386d4433c10 286 Gene3D G3DSA:3.40.50.1980 21 115 1.0E-19 T 12-10-2018 BAMF_1120 9c38402bfe10cda39c649386d4433c10 286 Pfam PF01497 Periplasmic binding protein 70 255 4.5E-22 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BAMF_2078 2a543ce7e57ca960edb061e32a03802c 422 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BAMF_2078 2a543ce7e57ca960edb061e32a03802c 422 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 421 1.7E-28 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BAMF_2078 2a543ce7e57ca960edb061e32a03802c 422 SUPERFAMILY SSF53686 13 366 1.57E-101 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BAMF_2078 2a543ce7e57ca960edb061e32a03802c 422 Gene3D G3DSA:3.40.50.1100 59 158 2.9E-118 T 12-10-2018 BAMF_2078 2a543ce7e57ca960edb061e32a03802c 422 TIGRFAM TIGR02079 THD1: threonine dehydratase 14 422 2.1E-195 T 12-10-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BAMF_2078 2a543ce7e57ca960edb061e32a03802c 422 Gene3D G3DSA:3.40.50.1100 23 326 2.9E-118 T 12-10-2018 BAMF_2078 2a543ce7e57ca960edb061e32a03802c 422 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 316 7.0E-76 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BAMF_3632 2a5f4e8e17d109dbc032191585a717d7 268 Gene3D G3DSA:3.90.550.10 1 235 4.8E-42 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3632 2a5f4e8e17d109dbc032191585a717d7 268 Pfam PF00535 Glycosyl transferase family 2 4 162 6.3E-31 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BAMF_3632 2a5f4e8e17d109dbc032191585a717d7 268 SUPERFAMILY SSF53448 3 207 1.82E-46 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_1048 d628e54c668aa25fef48b06fa9da4032 444 Pfam PF00571 CBS domain 217 272 1.1E-4 T 12-10-2018 IPR000644 CBS domain BAMF_1048 d628e54c668aa25fef48b06fa9da4032 444 Pfam PF00571 CBS domain 290 338 4.0E-5 T 12-10-2018 IPR000644 CBS domain BAMF_1048 d628e54c668aa25fef48b06fa9da4032 444 Pfam PF01595 Domain of unknown function DUF21 7 201 7.5E-48 T 12-10-2018 IPR002550 CNNM, transmembrane domain BAMF_1048 d628e54c668aa25fef48b06fa9da4032 444 Gene3D G3DSA:3.30.465.10 348 428 1.1E-13 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BAMF_1048 d628e54c668aa25fef48b06fa9da4032 444 SMART SM01091 354 431 1.8E-19 T 12-10-2018 IPR005170 Transporter-associated domain BAMF_1048 d628e54c668aa25fef48b06fa9da4032 444 Gene3D G3DSA:3.10.580.10 195 347 3.0E-48 T 12-10-2018 BAMF_1048 d628e54c668aa25fef48b06fa9da4032 444 SUPERFAMILY SSF56176 352 430 1.55E-15 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BAMF_1048 d628e54c668aa25fef48b06fa9da4032 444 SUPERFAMILY SSF54631 204 341 4.17E-29 T 12-10-2018 BAMF_1048 d628e54c668aa25fef48b06fa9da4032 444 Pfam PF03471 Transporter associated domain 355 430 1.2E-15 T 12-10-2018 IPR005170 Transporter-associated domain BAMF_0711 db2a328814ac42cb79564542606f6345 518 SUPERFAMILY SSF52540 307 507 4.08E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0711 db2a328814ac42cb79564542606f6345 518 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0711 db2a328814ac42cb79564542606f6345 518 SMART SM00382 28 252 3.9E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0711 db2a328814ac42cb79564542606f6345 518 SMART SM00382 349 518 5.6E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0711 db2a328814ac42cb79564542606f6345 518 SUPERFAMILY SSF52540 4 244 1.1E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0711 db2a328814ac42cb79564542606f6345 518 Gene3D G3DSA:3.40.50.300 289 515 4.2E-44 T 12-10-2018 BAMF_0711 db2a328814ac42cb79564542606f6345 518 Pfam PF00005 ABC transporter 20 191 1.6E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0711 db2a328814ac42cb79564542606f6345 518 Pfam PF00005 ABC transporter 342 469 5.7E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0711 db2a328814ac42cb79564542606f6345 518 Gene3D G3DSA:3.40.50.300 3 285 5.8E-66 T 12-10-2018 BAMF_0711 db2a328814ac42cb79564542606f6345 518 Pfam PF12848 ABC transporter 230 315 2.9E-21 T 12-10-2018 IPR032781 ABC-transporter extension domain BAMF_0711 db2a328814ac42cb79564542606f6345 518 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SUPERFAMILY SSF51735 3935 4110 1.18E-7 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SUPERFAMILY SSF52777 863 1132 6.0E-45 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SUPERFAMILY SSF47336 1646 1764 3.01E-17 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1674 1689 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SUPERFAMILY SSF53901 4530 4879 1.04E-67 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:3.30.559.10 685 1056 3.2E-96 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:1.10.1200.10 1638 1722 1.3E-19 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:3.30.70.3050 3796 3894 3.3E-250 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:3.40.50.720 3916 4383 2.3E-116 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:1.10.1200.10 580 684 4.7E-13 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:3.40.47.10 4529 4951 9.9E-132 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:3.40.50.12780 1139 1533 4.5E-130 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SUPERFAMILY SSF47336 3097 3169 1.57E-13 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SUPERFAMILY SSF47336 3191 3321 8.51E-15 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2129 2240 2.6E-10 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 3692 3808 3.0E-14 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SUPERFAMILY SSF52777 684 856 1.56E-31 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SUPERFAMILY SSF47336 4415 4546 2.09E-14 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF14765 Polyketide synthase dehydratase 2358 2644 5.3E-60 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF13193 AMP-binding enzyme C-terminal domain 1549 1623 3.0E-13 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 3564 3688 3.4E-41 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2008 2126 1.8E-39 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 4772 4886 1.9E-31 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SUPERFAMILY SSF53901 1749 2175 6.07E-76 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF08659 KR domain 4130 4326 1.8E-41 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF08659 KR domain 2829 3014 3.7E-55 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:3.30.300.30 451 559 1.1E-34 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SUPERFAMILY SSF56801 25 561 2.09E-98 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SMART SM00825 Beta-ketoacyl synthase 1753 2179 7.3E-137 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SMART SM00825 Beta-ketoacyl synthase 4534 4938 1.4E-106 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SMART SM00825 Beta-ketoacyl synthase 3309 3747 9.0E-200 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:3.30.70.3290 2180 2333 2.8E-57 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 ProSitePatterns PS00012 Phosphopantetheine attachment site. 612 627 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SUPERFAMILY SSF47336 583 669 5.5E-13 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:3.10.129.110 2365 2647 1.2E-71 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:3.40.50.12780 15 449 6.2E-131 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2829 3015 1.5E-49 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4128 4327 4.0E-42 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:3.40.47.10 1747 2179 1.0E-148 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SUPERFAMILY SSF56801 1105 1662 5.36E-154 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SMART SM00823 Phosphopantetheine attachment site 1650 1719 2.4E-8 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SMART SM00823 Phosphopantetheine attachment site 586 657 0.0015 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SMART SM00823 Phosphopantetheine attachment site 4417 4488 9.1E-8 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SMART SM00823 Phosphopantetheine attachment site 3189 3260 2.6E-12 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SMART SM00823 Phosphopantetheine attachment site 3096 3167 3.2E-13 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1290 1301 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4443 4458 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:3.30.559.30 860 1112 3.2E-96 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SMART SM01294 4418 4484 3.1E-8 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SMART SM01294 3097 3163 5.8E-5 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SMART SM01294 3190 3256 2.4E-4 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SUPERFAMILY SSF53901 3304 3741 1.52E-90 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SUPERFAMILY SSF51735 2828 3045 9.76E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SMART SM00826 2358 2523 3.3E-20 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:1.10.1200.10 4406 4486 8.5E-19 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF00668 Condensation domain 683 1127 1.4E-105 T 12-10-2018 IPR001242 Condensation domain BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 SUPERFAMILY SSF51735 4126 4422 2.37E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 3469 3485 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 4677 4693 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:3.30.300.30 1534 1637 1.6E-32 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF00550 Phosphopantetheine attachment site 3192 3256 1.9E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF00550 Phosphopantetheine attachment site 592 652 1.3E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF00550 Phosphopantetheine attachment site 3098 3163 6.6E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF00550 Phosphopantetheine attachment site 1652 1715 8.6E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF00550 Phosphopantetheine attachment site 4418 4484 1.6E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:1.10.1200.10 3181 3263 9.6E-19 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:1.10.1200.10 3090 3171 2.3E-19 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:3.40.50.720 2651 3071 6.2E-147 T 12-10-2018 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF00501 AMP-binding enzyme 1146 1540 1.7E-105 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF00501 AMP-binding enzyme 52 456 3.0E-66 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1167 1564 1.6E-125 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Gene3D G3DSA:3.40.47.10 3309 3913 3.3E-250 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1751 2000 2.6E-61 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3307 3556 4.4E-89 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_1786 8beda46a46278990e8ade9da55410c21 4983 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4532 4764 3.1E-63 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_2031 e77379a5874f856ef74cf9f5b7a89dc4 492 SUPERFAMILY SSF51445 98 426 1.43E-64 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_2031 e77379a5874f856ef74cf9f5b7a89dc4 492 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 425 486 1.3E-12 T 12-10-2018 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BAMF_2031 e77379a5874f856ef74cf9f5b7a89dc4 492 PRINTS PR00843 Glycosyl hydrolase family 30 signature 87 107 7.6E-9 T 12-10-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BAMF_2031 e77379a5874f856ef74cf9f5b7a89dc4 492 PRINTS PR00843 Glycosyl hydrolase family 30 signature 123 149 7.6E-9 T 12-10-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BAMF_2031 e77379a5874f856ef74cf9f5b7a89dc4 492 PRINTS PR00843 Glycosyl hydrolase family 30 signature 221 238 7.6E-9 T 12-10-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BAMF_2031 e77379a5874f856ef74cf9f5b7a89dc4 492 Gene3D G3DSA:3.20.20.80 76 424 5.7E-98 T 12-10-2018 BAMF_2031 e77379a5874f856ef74cf9f5b7a89dc4 492 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 98 358 6.7E-33 T 12-10-2018 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BAMF_2031 e77379a5874f856ef74cf9f5b7a89dc4 492 Gene3D G3DSA:2.60.40.1180 425 491 3.2E-8 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta BAMF_0067 85980714802f0a90c436894bf527266c 486 Gene3D G3DSA:3.40.50.620 20 250 2.0E-67 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_0067 85980714802f0a90c436894bf527266c 486 Pfam PF01171 PP-loop family 34 216 6.9E-62 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 BAMF_0067 85980714802f0a90c436894bf527266c 486 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 399 444 7.7E-19 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BAMF_0067 85980714802f0a90c436894bf527266c 486 Pfam PF09179 TilS substrate binding domain 272 337 3.4E-5 T 12-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BAMF_0067 85980714802f0a90c436894bf527266c 486 SUPERFAMILY SSF82829 227 336 4.45E-11 T 12-10-2018 BAMF_0067 85980714802f0a90c436894bf527266c 486 SUPERFAMILY SSF56037 390 456 1.91E-16 T 12-10-2018 BAMF_0067 85980714802f0a90c436894bf527266c 486 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 34 220 8.7E-61 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BAMF_0067 85980714802f0a90c436894bf527266c 486 Pfam PF11734 TilS substrate C-terminal domain 399 457 7.5E-14 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BAMF_0067 85980714802f0a90c436894bf527266c 486 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 25 331 24.763 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BAMF_0067 85980714802f0a90c436894bf527266c 486 SUPERFAMILY SSF52402 21 249 1.96E-53 T 12-10-2018 BAMF_0067 85980714802f0a90c436894bf527266c 486 Gene3D G3DSA:1.20.59.30 258 343 3.1E-29 T 12-10-2018 BAMF_0067 85980714802f0a90c436894bf527266c 486 SMART SM00977 399 474 3.3E-22 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BAMF_1841 7c9c13586f3a2978db776f8b49c36445 339 SUPERFAMILY SSF53901 54 287 2.7E-15 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1841 7c9c13586f3a2978db776f8b49c36445 339 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 4 332 7.7E-155 T 12-10-2018 IPR010894 Stage V sporulation AD BAMF_1841 7c9c13586f3a2978db776f8b49c36445 339 PIRSF PIRSF011570 1 335 8.4E-158 T 12-10-2018 IPR010894 Stage V sporulation AD BAMF_1841 7c9c13586f3a2978db776f8b49c36445 339 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 5 332 4.2E-155 T 12-10-2018 IPR010894 Stage V sporulation AD BAMF_1841 7c9c13586f3a2978db776f8b49c36445 339 Gene3D G3DSA:3.40.47.40 1 339 5.6E-148 T 12-10-2018 IPR038369 Stage V sporulation AD superfamily BAMF_3820 7c9c13586f3a2978db776f8b49c36445 339 SUPERFAMILY SSF53901 54 287 2.7E-15 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_3820 7c9c13586f3a2978db776f8b49c36445 339 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 4 332 7.7E-155 T 12-10-2018 IPR010894 Stage V sporulation AD BAMF_3820 7c9c13586f3a2978db776f8b49c36445 339 PIRSF PIRSF011570 1 335 8.4E-158 T 12-10-2018 IPR010894 Stage V sporulation AD BAMF_3820 7c9c13586f3a2978db776f8b49c36445 339 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 5 332 4.2E-155 T 12-10-2018 IPR010894 Stage V sporulation AD BAMF_3820 7c9c13586f3a2978db776f8b49c36445 339 Gene3D G3DSA:3.40.47.40 1 339 5.6E-148 T 12-10-2018 IPR038369 Stage V sporulation AD superfamily BAMF_1963 7c9c13586f3a2978db776f8b49c36445 339 SUPERFAMILY SSF53901 54 287 2.7E-15 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1963 7c9c13586f3a2978db776f8b49c36445 339 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 4 332 7.7E-155 T 12-10-2018 IPR010894 Stage V sporulation AD BAMF_1963 7c9c13586f3a2978db776f8b49c36445 339 PIRSF PIRSF011570 1 335 8.4E-158 T 12-10-2018 IPR010894 Stage V sporulation AD BAMF_1963 7c9c13586f3a2978db776f8b49c36445 339 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 5 332 4.2E-155 T 12-10-2018 IPR010894 Stage V sporulation AD BAMF_1963 7c9c13586f3a2978db776f8b49c36445 339 Gene3D G3DSA:3.40.47.40 1 339 5.6E-148 T 12-10-2018 IPR038369 Stage V sporulation AD superfamily BAMF_1044 542b65bd00b2999c1ef53c2544f91572 96 Pfam PF17453 Sigma-M inhibitor protein 1 96 3.8E-58 T 12-10-2018 IPR020496 Probable anti-sigma M factor YhdK BAMF_1044 542b65bd00b2999c1ef53c2544f91572 96 ProDom PD065873 YHDK TRANSCRIPTION ANTI-SIGMA-M REPRESSOR TRANSMEMBRANE MEMBRANE PROBABLE REGULATION FACTOR 1 96 4.0E-43 T 12-10-2018 IPR020496 Probable anti-sigma M factor YhdK BAMF_0065 adb6a73289dcb0e5163def58ad3f89f0 245 Pfam PF00092 von Willebrand factor type A domain 7 77 2.3E-5 T 12-10-2018 IPR002035 von Willebrand factor, type A BAMF_0065 adb6a73289dcb0e5163def58ad3f89f0 245 SUPERFAMILY SSF53300 133 226 2.67E-10 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BAMF_0065 adb6a73289dcb0e5163def58ad3f89f0 245 SUPERFAMILY SSF53300 3 71 2.37E-9 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BAMF_0065 adb6a73289dcb0e5163def58ad3f89f0 245 Gene3D G3DSA:3.40.50.410 1 240 4.7E-58 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BAMF_3444 6926862e23a576970e1c39bf17306071 255 PIRSF PIRSF001332 2 252 1.9E-97 T 12-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 BAMF_3444 6926862e23a576970e1c39bf17306071 255 Gene3D G3DSA:3.30.1330.80 97 219 1.7E-79 T 12-10-2018 BAMF_3444 6926862e23a576970e1c39bf17306071 255 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 21 251 1.2E-104 T 12-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 BAMF_3444 6926862e23a576970e1c39bf17306071 255 Gene3D G3DSA:3.30.1330.80 22 238 1.7E-79 T 12-10-2018 BAMF_3444 6926862e23a576970e1c39bf17306071 255 Pfam PF03306 Alpha-acetolactate decarboxylase 22 239 6.7E-82 T 12-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 BAMF_3444 6926862e23a576970e1c39bf17306071 255 SUPERFAMILY SSF117856 20 251 6.28E-85 T 12-10-2018 BAMF_1379 c15a74a71a65c46cc8a23bf4d047a549 517 Pfam PF07690 Major Facilitator Superfamily 55 276 9.5E-22 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_1379 c15a74a71a65c46cc8a23bf4d047a549 517 Gene3D G3DSA:1.20.1250.20 2 192 3.8E-17 T 12-10-2018 BAMF_1379 c15a74a71a65c46cc8a23bf4d047a549 517 SUPERFAMILY SSF103473 1 468 2.09E-24 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_1379 c15a74a71a65c46cc8a23bf4d047a549 517 Gene3D G3DSA:1.20.1250.20 263 507 1.5E-5 T 12-10-2018 BAMF_2593 9e63775295c45ffb6b959f861664204f 521 SUPERFAMILY SSF46977 410 504 3.4E-20 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_2593 9e63775295c45ffb6b959f861664204f 521 Gene3D G3DSA:3.90.700.10 230 335 9.8E-127 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_2593 9e63775295c45ffb6b959f861664204f 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 332 354 6.9E-5 T 12-10-2018 BAMF_2593 9e63775295c45ffb6b959f861664204f 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.9E-5 T 12-10-2018 BAMF_2593 9e63775295c45ffb6b959f861664204f 521 Gene3D G3DSA:3.50.50.60 6 381 9.8E-127 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_2593 9e63775295c45ffb6b959f861664204f 521 Pfam PF02910 Fumarate reductase flavoprotein C-term 412 499 2.4E-11 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_2593 9e63775295c45ffb6b959f861664204f 521 SUPERFAMILY SSF56425 220 329 4.49E-29 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_2593 9e63775295c45ffb6b959f861664204f 521 Gene3D G3DSA:1.20.58.100 390 487 5.7E-18 T 12-10-2018 BAMF_2593 9e63775295c45ffb6b959f861664204f 521 SUPERFAMILY SSF51905 6 392 2.6E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_2593 9e63775295c45ffb6b959f861664204f 521 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 3 487 1.1E-183 T 12-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 BAMF_2593 9e63775295c45ffb6b959f861664204f 521 Pfam PF00890 FAD binding domain 6 369 1.6E-81 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_1626 3ba8a7621481652c99fb1cb48d80e9e6 239 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 12-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_1626 3ba8a7621481652c99fb1cb48d80e9e6 239 SUPERFAMILY SSF51366 1 231 1.66E-68 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BAMF_1626 3ba8a7621481652c99fb1cb48d80e9e6 239 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 231 2.0E-60 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_1626 3ba8a7621481652c99fb1cb48d80e9e6 239 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 230 7.6E-46 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_1626 3ba8a7621481652c99fb1cb48d80e9e6 239 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 235 38.274 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_1626 3ba8a7621481652c99fb1cb48d80e9e6 239 SMART SM00934 5 230 6.0E-86 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_1626 3ba8a7621481652c99fb1cb48d80e9e6 239 Gene3D G3DSA:3.20.20.70 1 239 2.1E-79 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_3527 8095b10614028c27b8205f781b1d2e82 415 Pfam PF00464 Serine hydroxymethyltransferase 6 380 1.3E-184 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BAMF_3527 8095b10614028c27b8205f781b1d2e82 415 Gene3D G3DSA:3.40.640.10 33 283 1.7E-186 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_3527 8095b10614028c27b8205f781b1d2e82 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BAMF_3527 8095b10614028c27b8205f781b1d2e82 415 PIRSF PIRSF000412 1 414 1.0E-171 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BAMF_3527 8095b10614028c27b8205f781b1d2e82 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 411 53.274 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BAMF_3527 8095b10614028c27b8205f781b1d2e82 415 Gene3D G3DSA:3.90.1150.10 7 389 1.7E-186 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_3527 8095b10614028c27b8205f781b1d2e82 415 SUPERFAMILY SSF53383 2 411 2.06E-181 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_1975 6b69eb4ab47cce99e0f255e9be62ce06 192 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 106 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BAMF_1975 6b69eb4ab47cce99e0f255e9be62ce06 192 SMART SM00347 33 133 9.2E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1975 6b69eb4ab47cce99e0f255e9be62ce06 192 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 6.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1975 6b69eb4ab47cce99e0f255e9be62ce06 192 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 6.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1975 6b69eb4ab47cce99e0f255e9be62ce06 192 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 6.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1975 6b69eb4ab47cce99e0f255e9be62ce06 192 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 6.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1975 6b69eb4ab47cce99e0f255e9be62ce06 192 SUPERFAMILY SSF46785 10 147 1.04E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1975 6b69eb4ab47cce99e0f255e9be62ce06 192 Gene3D G3DSA:1.10.10.10 2 192 3.2E-50 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1975 6b69eb4ab47cce99e0f255e9be62ce06 192 Pfam PF12802 MarR family 37 97 1.2E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_2617 8d3a7f14cebef227c47857e77ee50f3f 340 SUPERFAMILY SSF56112 2 313 3.67E-13 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BAMF_2617 8d3a7f14cebef227c47857e77ee50f3f 340 Gene3D G3DSA:3.30.200.20 1 90 1.9E-9 T 12-10-2018 BAMF_2617 8d3a7f14cebef227c47857e77ee50f3f 340 Gene3D G3DSA:3.90.1200.10 91 320 4.6E-17 T 12-10-2018 BAMF_2617 8d3a7f14cebef227c47857e77ee50f3f 340 TIGRFAM TIGR02904 spore_ysxE: spore coat protein YsxE 4 310 2.8E-106 T 12-10-2018 IPR014253 Spore coat protein YsxE BAMF_1119 f65bdf1b445f3ccd6d6816b83d769932 382 Gene3D G3DSA:3.30.70.80 30 109 1.5E-27 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BAMF_1119 f65bdf1b445f3ccd6d6816b83d769932 382 PRINTS PR00723 Subtilisin serine protease family (S8) signature 325 341 7.7E-24 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_1119 f65bdf1b445f3ccd6d6816b83d769932 382 PRINTS PR00723 Subtilisin serine protease family (S8) signature 130 149 7.7E-24 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_1119 f65bdf1b445f3ccd6d6816b83d769932 382 PRINTS PR00723 Subtilisin serine protease family (S8) signature 167 180 7.7E-24 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_1119 f65bdf1b445f3ccd6d6816b83d769932 382 Gene3D G3DSA:3.40.50.200 110 382 2.8E-118 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BAMF_1119 f65bdf1b445f3ccd6d6816b83d769932 382 Pfam PF00082 Subtilase family 130 373 9.1E-65 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BAMF_1119 f65bdf1b445f3ccd6d6816b83d769932 382 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 326 336 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BAMF_1119 f65bdf1b445f3ccd6d6816b83d769932 382 Pfam PF05922 Peptidase inhibitor I9 39 105 9.6E-5 T 12-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BAMF_1119 f65bdf1b445f3ccd6d6816b83d769932 382 SUPERFAMILY SSF52743 108 381 6.94E-95 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BAMF_1119 f65bdf1b445f3ccd6d6816b83d769932 382 SUPERFAMILY SSF54897 37 106 1.7E-23 T 12-10-2018 BAMF_1119 f65bdf1b445f3ccd6d6816b83d769932 382 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 135 146 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BAMF_1119 f65bdf1b445f3ccd6d6816b83d769932 382 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 171 181 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 PRINTS PR00359 B-class P450 signature 148 163 3.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 PRINTS PR00359 B-class P450 signature 292 319 3.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 PRINTS PR00359 B-class P450 signature 350 361 3.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 PRINTS PR00359 B-class P450 signature 194 216 3.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 PRINTS PR00359 B-class P450 signature 131 147 3.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 PRINTS PR00359 B-class P450 signature 320 335 3.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 PRINTS PR00359 B-class P450 signature 341 350 3.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 PRINTS PR00359 B-class P450 signature 85 96 3.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 PRINTS PR00359 B-class P450 signature 275 286 3.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 SUPERFAMILY SSF48264 24 391 4.45E-92 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 Pfam PF00067 Cytochrome P450 47 386 1.6E-36 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 Gene3D G3DSA:1.10.630.10 2 405 4.3E-126 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 PRINTS PR00385 P450 superfamily signature 240 257 2.3E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 PRINTS PR00385 P450 superfamily signature 275 286 2.3E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 PRINTS PR00385 P450 superfamily signature 350 361 2.3E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 PRINTS PR00385 P450 superfamily signature 341 350 2.3E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1310 61e006b8ed2069a5a96056ecbe41e461 406 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 343 352 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 BAMF_2821 c047544b930b70fdecf29bdfc7adb90e 351 SMART SM00387 233 343 1.2E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2821 c047544b930b70fdecf29bdfc7adb90e 351 Gene3D G3DSA:3.30.565.10 192 340 8.1E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2821 c047544b930b70fdecf29bdfc7adb90e 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 340 2.3E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2821 c047544b930b70fdecf29bdfc7adb90e 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 297 2.3E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2821 c047544b930b70fdecf29bdfc7adb90e 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 269 283 2.3E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2821 c047544b930b70fdecf29bdfc7adb90e 351 Gene3D G3DSA:1.10.287.130 140 191 8.1E-34 T 12-10-2018 BAMF_2821 c047544b930b70fdecf29bdfc7adb90e 351 SUPERFAMILY SSF55874 192 340 4.19E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2821 c047544b930b70fdecf29bdfc7adb90e 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 342 2.0E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2794 fc5cbb4493b50bfdc8a4e8b6abddd092 310 PIRSF PIRSF012560 1 310 2.5E-119 T 12-10-2018 IPR012397 Pullulan 6-glucanohydrolase BAMF_3648 21b16bc7164bf90aaffd5a70f3b213b2 165 SUPERFAMILY SSF55729 14 163 8.23E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_3648 21b16bc7164bf90aaffd5a70f3b213b2 165 Gene3D G3DSA:3.40.630.30 14 165 1.6E-40 T 12-10-2018 BAMF_3648 21b16bc7164bf90aaffd5a70f3b213b2 165 Pfam PF00583 Acetyltransferase (GNAT) family 50 142 4.4E-13 T 12-10-2018 IPR000182 GNAT domain BAMF_0064 b3bd33194c59b2dd9d90e0a277efdc80 832 Gene3D G3DSA:3.60.40.10 591 832 3.0E-55 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_0064 b3bd33194c59b2dd9d90e0a277efdc80 832 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 625 809 7.2E-36 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_0064 b3bd33194c59b2dd9d90e0a277efdc80 832 SMART SM00331 597 809 4.0E-43 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_0064 b3bd33194c59b2dd9d90e0a277efdc80 832 SMART SM00332 325 807 1.1E-11 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_0064 b3bd33194c59b2dd9d90e0a277efdc80 832 SUPERFAMILY SSF81606 598 810 1.7E-21 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_0064 b3bd33194c59b2dd9d90e0a277efdc80 832 TIGRFAM TIGR02865 spore_II_E: stage II sporulation protein E 47 809 4.1E-304 T 12-10-2018 IPR014221 Sporulation stage II, protein E KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_3157 5945446b75349c45c97b3fd2f77d704b 408 Gene3D G3DSA:3.40.50.300 1 256 2.3E-72 T 12-10-2018 BAMF_3157 5945446b75349c45c97b3fd2f77d704b 408 Pfam PF00005 ABC transporter 18 166 4.4E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3157 5945446b75349c45c97b3fd2f77d704b 408 SMART SM00382 26 216 3.0E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3157 5945446b75349c45c97b3fd2f77d704b 408 SUPERFAMILY SSF52540 2 230 1.67E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1802 dda24fccb907d214227a64371565fdee 314 Gene3D G3DSA:3.40.50.300 12 290 2.8E-105 T 12-10-2018 BAMF_1802 dda24fccb907d214227a64371565fdee 314 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 306 31.004 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BAMF_1802 dda24fccb907d214227a64371565fdee 314 Pfam PF01715 IPP transferase 41 285 4.1E-87 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BAMF_1802 dda24fccb907d214227a64371565fdee 314 Gene3D G3DSA:1.10.20.140 115 187 2.8E-105 T 12-10-2018 BAMF_1802 dda24fccb907d214227a64371565fdee 314 SUPERFAMILY SSF52540 9 155 3.52E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1802 dda24fccb907d214227a64371565fdee 314 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 8 293 4.8E-119 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BAMF_1802 dda24fccb907d214227a64371565fdee 314 SUPERFAMILY SSF52540 6 224 5.7E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1342 d5285b08d2fd9c089f9cc09177a36f56 432 Gene3D G3DSA:3.40.50.300 5 232 4.4E-55 T 12-10-2018 BAMF_1342 d5285b08d2fd9c089f9cc09177a36f56 432 Pfam PF04466 Phage terminase large subunit 19 231 3.3E-79 T 12-10-2018 IPR035412 Phage terminase large subunit, N-terminal BAMF_1342 d5285b08d2fd9c089f9cc09177a36f56 432 Pfam PF17288 Terminase RNAseH like domain 268 410 7.3E-42 T 12-10-2018 IPR035413 Phage terminase large subunit, C-terminal BAMF_1342 d5285b08d2fd9c089f9cc09177a36f56 432 Gene3D G3DSA:3.30.420.280 238 415 1.1E-38 T 12-10-2018 BAMF_1342 d5285b08d2fd9c089f9cc09177a36f56 432 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 20 417 4.7E-90 T 12-10-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 BAMF_3088 b5b336919e4f85923124869300000ade 408 Gene3D G3DSA:1.20.1270.210 40 302 1.8E-5 T 12-10-2018 BAMF_3088 b5b336919e4f85923124869300000ade 408 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 33 368 1.1E-78 T 12-10-2018 IPR006427 Phage portal protein, HK97 BAMF_3088 b5b336919e4f85923124869300000ade 408 Gene3D G3DSA:2.40.500.30 55 310 1.8E-5 T 12-10-2018 BAMF_3088 b5b336919e4f85923124869300000ade 408 Pfam PF04860 Phage portal protein 38 359 1.8E-63 T 12-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein BAMF_3088 b5b336919e4f85923124869300000ade 408 Gene3D G3DSA:3.30.1120.70 196 247 1.8E-5 T 12-10-2018 BAMF_1045 0d6865a43808f10e0be462f693ddf227 357 Pfam PF13800 Sigma factor regulator N-terminal 59 153 1.7E-21 T 12-10-2018 IPR029101 Sigma factor regulator, N-terminal BAMF_1045 0d6865a43808f10e0be462f693ddf227 357 Pfam PF13791 Sigma factor regulator C-terminal 205 351 4.4E-37 T 12-10-2018 IPR025672 Sigma factor regulator C-terminal domain BAMF_1244 81ce0a30bbeb356c3f110ba80697270e 336 Gene3D G3DSA:3.40.50.720 1 246 8.3E-72 T 12-10-2018 BAMF_1244 81ce0a30bbeb356c3f110ba80697270e 336 Pfam PF00899 ThiF family 5 239 2.0E-55 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BAMF_1244 81ce0a30bbeb356c3f110ba80697270e 336 SUPERFAMILY SSF69572 3 327 1.16E-80 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BAMF_1819 1d2a771c48fe0cf013a37b519e35d96c 169 Pfam PF14568 SMI1-KNR4 cell-wall 40 141 2.1E-13 T 12-10-2018 BAMF_1819 1d2a771c48fe0cf013a37b519e35d96c 169 SMART SM00860 36 144 3.7E-14 T 12-10-2018 IPR018958 Knr4/Smi1-like domain BAMF_1819 1d2a771c48fe0cf013a37b519e35d96c 169 SUPERFAMILY SSF160631 28 157 1.44E-24 T 12-10-2018 BAMF_1819 1d2a771c48fe0cf013a37b519e35d96c 169 Gene3D G3DSA:3.40.1580.10 25 162 2.1E-24 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily BAMF_3288 28b09b5bb48d14cbcb9865da4de8f6cf 226 Gene3D G3DSA:3.40.50.300 2 226 8.0E-70 T 12-10-2018 BAMF_3288 28b09b5bb48d14cbcb9865da4de8f6cf 226 Pfam PF13614 AAA domain 51 205 9.8E-12 T 12-10-2018 IPR025669 AAA domain BAMF_3288 28b09b5bb48d14cbcb9865da4de8f6cf 226 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 26 225 1.7E-64 T 12-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 BAMF_3288 28b09b5bb48d14cbcb9865da4de8f6cf 226 SUPERFAMILY SSF52540 45 219 3.96E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2338 62fd1b4adb2ec9d97155a7a49fa582af 450 SUPERFAMILY SSF52440 1 113 3.74E-51 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BAMF_2338 62fd1b4adb2ec9d97155a7a49fa582af 450 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_2338 62fd1b4adb2ec9d97155a7a49fa582af 450 SMART SM00878 337 443 3.0E-70 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BAMF_2338 62fd1b4adb2ec9d97155a7a49fa582af 450 SUPERFAMILY SSF56059 83 351 2.3E-71 T 12-10-2018 BAMF_2338 62fd1b4adb2ec9d97155a7a49fa582af 450 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_2338 62fd1b4adb2ec9d97155a7a49fa582af 450 Pfam PF02785 Biotin carboxylase C-terminal domain 337 443 1.7E-43 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BAMF_2338 62fd1b4adb2ec9d97155a7a49fa582af 450 Gene3D G3DSA:3.30.470.130 1 448 2.4E-201 T 12-10-2018 BAMF_2338 62fd1b4adb2ec9d97155a7a49fa582af 450 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 449 4.6E-248 T 12-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 BAMF_2338 62fd1b4adb2ec9d97155a7a49fa582af 450 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 4.1E-83 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_2338 62fd1b4adb2ec9d97155a7a49fa582af 450 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.0E-47 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BAMF_2338 62fd1b4adb2ec9d97155a7a49fa582af 450 SUPERFAMILY SSF51246 332 445 3.61E-47 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BAMF_2050 ed4eca0c465b106ad3e79d4972071623 433 SUPERFAMILY SSF55031 203 311 3.89E-15 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BAMF_2050 ed4eca0c465b106ad3e79d4972071623 433 Pfam PF07687 Peptidase dimerisation domain 201 313 2.5E-17 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain BAMF_2050 ed4eca0c465b106ad3e79d4972071623 433 SUPERFAMILY SSF53187 6 419 3.43E-58 T 12-10-2018 BAMF_2050 ed4eca0c465b106ad3e79d4972071623 433 Gene3D G3DSA:3.40.630.10 30 419 2.1E-137 T 12-10-2018 BAMF_2050 ed4eca0c465b106ad3e79d4972071623 433 Gene3D G3DSA:3.30.70.360 204 330 2.1E-137 T 12-10-2018 BAMF_2050 ed4eca0c465b106ad3e79d4972071623 433 Pfam PF01546 Peptidase family M20/M25/M40 97 415 1.1E-38 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BAMF_2050 ed4eca0c465b106ad3e79d4972071623 433 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 20 409 1.1E-129 T 12-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase BAMF_3246 8b8385f46fab8db45a10980135ab61f6 293 SUPERFAMILY SSF55729 132 286 1.17E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_3246 8b8385f46fab8db45a10980135ab61f6 293 Pfam PF13480 Acetyltransferase (GNAT) domain 145 268 6.8E-10 T 12-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 BAMF_3246 8b8385f46fab8db45a10980135ab61f6 293 Gene3D G3DSA:3.40.630.30 98 284 1.0E-17 T 12-10-2018 BAMF_1739 caa93a2817ad4544d9d371f837c5e4da 313 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 21 86 9.1E-11 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BAMF_1739 caa93a2817ad4544d9d371f837c5e4da 313 Gene3D G3DSA:2.40.30.30 190 313 3.8E-44 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 BAMF_1739 caa93a2817ad4544d9d371f837c5e4da 313 Gene3D G3DSA:3.40.50.620 1 189 2.9E-52 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_1739 caa93a2817ad4544d9d371f837c5e4da 313 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 21 312 6.4E-116 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BAMF_1739 caa93a2817ad4544d9d371f837c5e4da 313 PIRSF PIRSF004491 3 313 2.2E-109 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BAMF_1739 caa93a2817ad4544d9d371f837c5e4da 313 SUPERFAMILY SSF82114 175 312 2.03E-47 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 BAMF_1739 caa93a2817ad4544d9d371f837c5e4da 313 SUPERFAMILY SSF52374 21 181 9.85E-27 T 12-10-2018 BAMF_1739 caa93a2817ad4544d9d371f837c5e4da 313 Pfam PF06574 FAD synthetase 14 168 3.7E-47 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BAMF_1739 caa93a2817ad4544d9d371f837c5e4da 313 Pfam PF01687 Riboflavin kinase 186 310 3.4E-39 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 BAMF_1739 caa93a2817ad4544d9d371f837c5e4da 313 SMART SM00904 185 312 1.2E-64 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 BAMF_1471 18b3beb5d50e474beed3cfc9ab1eced2 692 Gene3D G3DSA:1.10.8.500 334 387 8.1E-9 T 12-10-2018 BAMF_1471 18b3beb5d50e474beed3cfc9ab1eced2 692 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 485 644 1.9E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_1471 18b3beb5d50e474beed3cfc9ab1eced2 692 Pfam PF00672 HAMP domain 335 382 9.0E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_1471 18b3beb5d50e474beed3cfc9ab1eced2 692 Gene3D G3DSA:3.30.450.20 135 219 5.2E-39 T 12-10-2018 BAMF_1471 18b3beb5d50e474beed3cfc9ab1eced2 692 SMART SM00304 335 387 1.9E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_1471 18b3beb5d50e474beed3cfc9ab1eced2 692 SUPERFAMILY SSF103190 136 230 8.89E-10 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BAMF_1471 18b3beb5d50e474beed3cfc9ab1eced2 692 Gene3D G3DSA:1.10.287.950 407 691 2.5E-58 T 12-10-2018 BAMF_1471 18b3beb5d50e474beed3cfc9ab1eced2 692 Gene3D G3DSA:3.30.450.20 220 304 5.2E-39 T 12-10-2018 BAMF_1471 18b3beb5d50e474beed3cfc9ab1eced2 692 SMART SM00283 416 677 3.3E-79 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_1471 18b3beb5d50e474beed3cfc9ab1eced2 692 Pfam PF02743 Cache domain 73 296 1.5E-30 T 12-10-2018 IPR033479 Double Cache domain 1 BAMF_1471 18b3beb5d50e474beed3cfc9ab1eced2 692 SUPERFAMILY SSF58104 355 690 1.83E-65 T 12-10-2018 BAMF_0612 148f4e0ab9609eca51a0e9b1b0c1485f 253 Pfam PF04536 TPM domain 36 150 3.8E-22 T 12-10-2018 IPR007621 TPM domain BAMF_0612 148f4e0ab9609eca51a0e9b1b0c1485f 253 Gene3D G3DSA:3.10.310.50 23 165 1.6E-20 T 12-10-2018 BAMF_0490 39e4b24edf646d03c9dc8bb55e7b1bff 378 Gene3D G3DSA:3.40.50.720 169 338 2.7E-129 T 12-10-2018 BAMF_0490 39e4b24edf646d03c9dc8bb55e7b1bff 378 Pfam PF00107 Zinc-binding dehydrogenase 189 257 1.3E-8 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BAMF_0490 39e4b24edf646d03c9dc8bb55e7b1bff 378 SUPERFAMILY SSF51735 157 340 6.48E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0490 39e4b24edf646d03c9dc8bb55e7b1bff 378 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BAMF_0490 39e4b24edf646d03c9dc8bb55e7b1bff 378 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 1.3E-11 T 12-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated BAMF_0490 39e4b24edf646d03c9dc8bb55e7b1bff 378 SUPERFAMILY SSF50129 1 186 7.0E-58 T 12-10-2018 IPR011032 GroES-like superfamily BAMF_0490 39e4b24edf646d03c9dc8bb55e7b1bff 378 Gene3D G3DSA:3.90.180.10 4 365 2.7E-129 T 12-10-2018 BAMF_0490 39e4b24edf646d03c9dc8bb55e7b1bff 378 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 139 1.6E-28 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BAMF_2790 1c9ce64e9dcc4709de59239521621297 217 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 24 212 2.0E-68 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 BAMF_2790 1c9ce64e9dcc4709de59239521621297 217 SUPERFAMILY SSF53335 29 209 1.31E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_2790 1c9ce64e9dcc4709de59239521621297 217 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 212 28.846 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 BAMF_2790 1c9ce64e9dcc4709de59239521621297 217 Pfam PF02390 Putative methyltransferase 38 207 1.9E-51 T 12-10-2018 BAMF_2790 1c9ce64e9dcc4709de59239521621297 217 Gene3D G3DSA:3.40.50.150 1 213 1.3E-72 T 12-10-2018 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 SUPERFAMILY SSF50447 455 554 8.42E-19 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BAMF_2549 bd842476acfa19a403da3e0471320e20 878 SUPERFAMILY SSF101353 246 459 8.11E-69 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 Gene3D G3DSA:3.30.930.10 3 242 1.2E-95 T 12-10-2018 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 SMART SM00863 655 698 1.3E-21 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 SUPERFAMILY SSF55681 5 245 1.22E-89 T 12-10-2018 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 698 1.5E-18 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 Gene3D G3DSA:3.10.310.40 765 876 8.1E-36 T 12-10-2018 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 186.984 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 Gene3D G3DSA:3.30.980.10 564 699 5.6E-52 T 12-10-2018 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 SUPERFAMILY SSF55186 554 710 6.02E-52 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 Pfam PF02272 DHHA1 domain 735 874 7.1E-30 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 300 313 4.5E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 4.5E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 4.5E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 276 292 4.5E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 4.5E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 857 0.0 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 Gene3D G3DSA:3.30.54.20 626 679 5.6E-52 T 12-10-2018 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 Gene3D G3DSA:2.40.30.130 460 554 1.5E-10 T 12-10-2018 BAMF_2549 bd842476acfa19a403da3e0471320e20 878 Pfam PF01411 tRNA synthetases class II (A) 8 557 4.9E-219 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 BAMF_2552 f5bcac1fd4a55d77b355ae5f15ec9091 275 SMART SM00062 49 272 5.7E-84 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BAMF_2552 f5bcac1fd4a55d77b355ae5f15ec9091 275 SMART SM00079 49 271 5.0E-5 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 BAMF_2552 f5bcac1fd4a55d77b355ae5f15ec9091 275 Gene3D G3DSA:3.40.190.10 137 234 8.8E-84 T 12-10-2018 BAMF_2552 f5bcac1fd4a55d77b355ae5f15ec9091 275 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 73 86 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site BAMF_2552 f5bcac1fd4a55d77b355ae5f15ec9091 275 Gene3D G3DSA:3.40.190.10 50 268 8.8E-84 T 12-10-2018 BAMF_2552 f5bcac1fd4a55d77b355ae5f15ec9091 275 SUPERFAMILY SSF53850 6 271 1.0E-68 T 12-10-2018 BAMF_2552 f5bcac1fd4a55d77b355ae5f15ec9091 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 270 7.4E-60 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BAMF_1682 0fdd74f6d6b030301fd6774d5f4a59ba 299 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 72 284 2.9E-83 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 BAMF_1682 0fdd74f6d6b030301fd6774d5f4a59ba 299 Pfam PF02481 DNA recombination-mediator protein A 73 278 8.0E-74 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 BAMF_1682 0fdd74f6d6b030301fd6774d5f4a59ba 299 SUPERFAMILY SSF102405 83 283 2.9E-37 T 12-10-2018 BAMF_1682 0fdd74f6d6b030301fd6774d5f4a59ba 299 Gene3D G3DSA:3.40.50.450 34 292 1.0E-88 T 12-10-2018 BAMF_3482 5176145aed31a8c9dc2b83f47207e049 273 SUPERFAMILY SSF117143 109 234 2.48E-13 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BAMF_3482 5176145aed31a8c9dc2b83f47207e049 273 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 144 3.3E-20 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BAMF_3482 5176145aed31a8c9dc2b83f47207e049 273 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 157 255 1.2E-21 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BAMF_3482 5176145aed31a8c9dc2b83f47207e049 273 Pfam PF00460 Flagella basal body rod protein 5 35 1.4E-11 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BAMF_3482 5176145aed31a8c9dc2b83f47207e049 273 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 193 270 5.0E-19 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BAMF_3482 5176145aed31a8c9dc2b83f47207e049 273 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BAMF_1132 a860c824b476762310989c0deba42138 403 SUPERFAMILY SSF55729 7 295 8.86E-77 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_1132 a860c824b476762310989c0deba42138 403 Gene3D G3DSA:3.40.630.30 15 296 9.8E-143 T 12-10-2018 BAMF_1132 a860c824b476762310989c0deba42138 403 Gene3D G3DSA:3.40.630.30 142 403 9.8E-143 T 12-10-2018 BAMF_1132 a860c824b476762310989c0deba42138 403 SUPERFAMILY SSF55718 296 403 1.57E-24 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BAMF_1132 a860c824b476762310989c0deba42138 403 Gene3D G3DSA:3.30.1050.10 297 393 9.8E-143 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BAMF_1132 a860c824b476762310989c0deba42138 403 Pfam PF13527 Acetyltransferase (GNAT) domain 9 142 7.4E-41 T 12-10-2018 BAMF_1132 a860c824b476762310989c0deba42138 403 Pfam PF13530 Sterol carrier protein domain 187 399 6.3E-55 T 12-10-2018 IPR025559 Enhanced intracellular survival protein domain BAMF_0442 31dea2a1706bda4eb2f4a3a78c3b344e 93 SUPERFAMILY SSF47598 9 47 5.44E-6 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BAMF_0442 31dea2a1706bda4eb2f4a3a78c3b344e 93 Pfam PF01402 Ribbon-helix-helix protein, copG family 12 45 5.2E-6 T 12-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 BAMF_0442 31dea2a1706bda4eb2f4a3a78c3b344e 93 Gene3D G3DSA:1.10.1220.10 1 93 1.2E-40 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 Gene3D G3DSA:1.10.287.130 383 457 1.6E-18 T 12-10-2018 BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 Pfam PF08447 PAS fold 28 96 1.2E-6 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 Gene3D G3DSA:3.30.450.20 10 117 1.9E-20 T 12-10-2018 BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 501 605 1.1E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 Gene3D G3DSA:3.30.565.10 460 606 9.2E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 585 8.6E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 552 8.6E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 604 8.6E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 566 8.6E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 SUPERFAMILY SSF55785 158 263 1.17E-13 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 SMART SM00388 395 458 1.0E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 SMART SM00086 215 255 0.19 T 12-10-2018 IPR001610 PAC motif BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 SMART SM00086 74 117 23.0 T 12-10-2018 IPR001610 PAC motif BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 SUPERFAMILY SSF55874 448 605 1.83E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 264 385 1.6E-10 T 12-10-2018 IPR000014 PAS domain BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 145 259 5.8E-12 T 12-10-2018 IPR000014 PAS domain BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 4 96 1.7E-5 T 12-10-2018 IPR000014 PAS domain BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 Gene3D G3DSA:3.30.450.20 126 252 2.9E-12 T 12-10-2018 BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 Pfam PF00512 His Kinase A (phospho-acceptor) domain 397 456 1.4E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 SMART SM00387 501 606 1.1E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 Gene3D G3DSA:3.30.450.20 259 382 1.2E-11 T 12-10-2018 BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 SMART SM00091 143 209 6.7E-5 T 12-10-2018 IPR000014 PAS domain BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 SMART SM00091 5 71 2.1E-6 T 12-10-2018 IPR000014 PAS domain BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 SMART SM00091 267 333 5.0E-8 T 12-10-2018 IPR000014 PAS domain BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 SUPERFAMILY SSF55785 16 99 4.19E-11 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 SUPERFAMILY SSF47384 391 458 1.31E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 Pfam PF00989 PAS fold 267 377 3.0E-14 T 12-10-2018 IPR013767 PAS fold GO:0006355 BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 Pfam PF00989 PAS fold 144 249 1.2E-14 T 12-10-2018 IPR013767 PAS fold GO:0006355 BAMF_1475 7b5699da7e4300f1441f3a44ba3bb58a 606 SUPERFAMILY SSF55785 252 378 1.2E-12 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_2929 7ec163c833f4b4356dc66e12ccc58853 225 Pfam PF04298 Putative neutral zinc metallopeptidase 4 218 1.5E-87 T 12-10-2018 IPR007395 Putative neutral zinc metallopeptidase BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 SMART SM01192 139 427 4.0E-229 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 426 3.2E-145 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 PRINTS PR00148 Enolase signature 313 324 6.7E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 PRINTS PR00148 Enolase signature 336 350 6.7E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 PRINTS PR00148 Enolase signature 161 174 6.7E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 PRINTS PR00148 Enolase signature 37 51 6.7E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 PRINTS PR00148 Enolase signature 107 123 6.7E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 PRINTS PR00148 Enolase signature 365 382 6.7E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 ProSitePatterns PS00164 Enolase signature. 336 349 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 Gene3D G3DSA:3.20.20.120 128 430 1.5E-139 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 Gene3D G3DSA:3.30.390.10 3 127 1.1E-60 T 12-10-2018 IPR029017 Enolase-like, N-terminal BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 SMART SM01193 4 134 9.1E-101 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 SUPERFAMILY SSF54826 3 138 3.54E-61 T 12-10-2018 BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 6.3E-224 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 Pfam PF03952 Enolase, N-terminal domain 4 134 8.2E-63 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 PIRSF PIRSF001400 1 427 5.2E-198 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 SUPERFAMILY SSF51604 139 428 1.13E-130 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BAMF_3252 c111d8815e89c8de11db7fce42e8dc31 430 Hamap MF_00318 Enolase [eno]. 2 413 45.96 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_0041 b4f2ece43e81742ed6418f07a58df7b6 187 Pfam PF13662 Toprim domain 4 71 1.4E-6 T 12-10-2018 IPR006171 TOPRIM domain BAMF_0041 b4f2ece43e81742ed6418f07a58df7b6 187 SMART SM00493 4 77 1.8E-8 T 12-10-2018 IPR006171 TOPRIM domain BAMF_0041 b4f2ece43e81742ed6418f07a58df7b6 187 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 2 177 8.2E-76 T 12-10-2018 IPR004466 Ribonuclease M5 GO:0043822 BAMF_0041 b4f2ece43e81742ed6418f07a58df7b6 187 Gene3D G3DSA:3.40.1360.20 1 117 5.2E-25 T 12-10-2018 BAMF_0041 b4f2ece43e81742ed6418f07a58df7b6 187 SUPERFAMILY SSF110455 1 115 1.86E-35 T 12-10-2018 BAMF_0041 b4f2ece43e81742ed6418f07a58df7b6 187 Hamap MF_01469 Ribonuclease M5 [rnmV]. 3 178 32.271 T 12-10-2018 IPR004466 Ribonuclease M5 GO:0043822 BAMF_0041 b4f2ece43e81742ed6418f07a58df7b6 187 Pfam PF13331 Domain of unknown function (DUF4093) 93 176 2.6E-27 T 12-10-2018 IPR025156 Ribonuclease M5, C-terminal domain BAMF_2155 224e60a4597027c55cb565b99db7df07 255 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 181 249 1.6E-13 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_2155 224e60a4597027c55cb565b99db7df07 255 SUPERFAMILY SSF46626 133 251 2.47E-15 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BAMF_2155 224e60a4597027c55cb565b99db7df07 255 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 71 158 3.1E-8 T 12-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BAMF_2155 224e60a4597027c55cb565b99db7df07 255 PIRSF PIRSF036636 1 255 6.8E-149 T 12-10-2018 IPR012049 Menaquinone:cytochrome c reductase, cytochrome b/c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 BAMF_2155 224e60a4597027c55cb565b99db7df07 255 SUPERFAMILY SSF81648 21 156 3.79E-30 T 12-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BAMF_2155 224e60a4597027c55cb565b99db7df07 255 Gene3D G3DSA:1.20.810.10 14 170 1.2E-24 T 12-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 BAMF_2155 224e60a4597027c55cb565b99db7df07 255 Gene3D G3DSA:1.10.760.10 182 253 1.2E-15 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BAMF_0239 3a1a4a1a69318fe7d3da203446ca6780 241 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 219 3.5E-55 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BAMF_0239 3a1a4a1a69318fe7d3da203446ca6780 241 Pfam PF00902 Sec-independent protein translocase protein (TatC) 11 214 8.5E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BAMF_0239 3a1a4a1a69318fe7d3da203446ca6780 241 ProSitePatterns PS01218 TatC family signature. 147 166 - T 12-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site BAMF_0239 3a1a4a1a69318fe7d3da203446ca6780 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 122 1.1E-34 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BAMF_0239 3a1a4a1a69318fe7d3da203446ca6780 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 147 175 1.1E-34 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BAMF_0239 3a1a4a1a69318fe7d3da203446ca6780 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 1.1E-34 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BAMF_0239 3a1a4a1a69318fe7d3da203446ca6780 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 78 96 1.1E-34 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BAMF_0239 3a1a4a1a69318fe7d3da203446ca6780 241 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 233 14.61 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BAMF_1809 c44777053799323b738d2535b9294ecc 206 Gene3D G3DSA:3.90.79.10 1 206 7.5E-60 T 12-10-2018 BAMF_1809 c44777053799323b738d2535b9294ecc 206 SUPERFAMILY SSF55811 64 198 3.88E-7 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BAMF_0608 88d4480de0cf93ed3838f06c9dbf6216 318 Gene3D G3DSA:3.40.1190.20 2 318 7.7E-88 T 12-10-2018 IPR029056 Ribokinase-like BAMF_0608 88d4480de0cf93ed3838f06c9dbf6216 318 SUPERFAMILY SSF53613 5 315 2.03E-77 T 12-10-2018 IPR029056 Ribokinase-like BAMF_0608 88d4480de0cf93ed3838f06c9dbf6216 318 Pfam PF00294 pfkB family carbohydrate kinase 4 310 1.5E-78 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB BAMF_0608 88d4480de0cf93ed3838f06c9dbf6216 318 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 35 59 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BAMF_0608 88d4480de0cf93ed3838f06c9dbf6216 318 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 252 265 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BAMF_0134 db79bd5df674f1cb28ec63f6b39adbfc 59 Gene3D G3DSA:3.30.1390.20 1 58 2.5E-27 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BAMF_0134 db79bd5df674f1cb28ec63f6b39adbfc 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 7.7E-26 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0134 db79bd5df674f1cb28ec63f6b39adbfc 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 12-10-2018 IPR018038 Ribosomal protein L30, conserved site BAMF_0134 db79bd5df674f1cb28ec63f6b39adbfc 59 SUPERFAMILY SSF55129 1 58 4.84E-21 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BAMF_0134 db79bd5df674f1cb28ec63f6b39adbfc 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 3.0E-20 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BAMF_0134 db79bd5df674f1cb28ec63f6b39adbfc 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.58 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0134 db79bd5df674f1cb28ec63f6b39adbfc 59 PIRSF PIRSF002211 1 59 2.9E-28 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1788 f183e77062822f524f137574db1055ba 3513 Gene3D G3DSA:3.40.50.720 3006 3352 2.4E-85 T 12-10-2018 BAMF_1788 f183e77062822f524f137574db1055ba 3513 Gene3D G3DSA:3.40.47.10 391 975 7.6E-252 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1788 f183e77062822f524f137574db1055ba 3513 Gene3D G3DSA:3.10.129.110 998 1284 5.2E-84 T 12-10-2018 BAMF_1788 f183e77062822f524f137574db1055ba 3513 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 390 640 3.1E-91 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_1788 f183e77062822f524f137574db1055ba 3513 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2287 2521 1.9E-80 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_1788 f183e77062822f524f137574db1055ba 3513 SUPERFAMILY SSF51735 1501 1719 2.48E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1788 f183e77062822f524f137574db1055ba 3513 SUPERFAMILY SSF47336 2163 2236 2.49E-13 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1788 f183e77062822f524f137574db1055ba 3513 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2189 2204 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1788 f183e77062822f524f137574db1055ba 3513 SUPERFAMILY SSF51735 1298 1489 1.38E-19 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1788 f183e77062822f524f137574db1055ba 3513 Gene3D G3DSA:3.40.50.720 1286 1733 6.2E-75 T 12-10-2018 BAMF_1788 f183e77062822f524f137574db1055ba 3513 Gene3D G3DSA:1.10.1200.10 3365 3458 5.5E-10 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1788 f183e77062822f524f137574db1055ba 3513 SMART SM01294 290 356 9.6E-6 T 12-10-2018 BAMF_1788 f183e77062822f524f137574db1055ba 3513 Gene3D G3DSA:3.40.50.150 1824 2105 2.1E-47 T 12-10-2018 BAMF_1788 f183e77062822f524f137574db1055ba 3513 SMART SM00825 Beta-ketoacyl synthase 2289 2704 4.9E-183 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1788 f183e77062822f524f137574db1055ba 3513 SMART SM00825 Beta-ketoacyl synthase 391 827 2.0E-202 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1788 f183e77062822f524f137574db1055ba 3513 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 769 889 1.5E-13 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1788 f183e77062822f524f137574db1055ba 3513 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2650 2762 1.2E-10 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1788 f183e77062822f524f137574db1055ba 3513 SUPERFAMILY SSF53901 386 756 7.83E-93 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1788 f183e77062822f524f137574db1055ba 3513 Gene3D G3DSA:3.10.129.110 1 261 9.0E-72 T 12-10-2018 BAMF_1788 f183e77062822f524f137574db1055ba 3513 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1503 1683 3.3E-23 T 12-10-2018 BAMF_1788 f183e77062822f524f137574db1055ba 3513 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3115 3296 1.4E-36 T 12-10-2018 BAMF_1788 f183e77062822f524f137574db1055ba 3513 SMART SM00823 Phosphopantetheine attachment site 2163 2233 1.2E-10 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1788 f183e77062822f524f137574db1055ba 3513 SMART SM00823 Phosphopantetheine attachment site 289 360 0.0022 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1788 f183e77062822f524f137574db1055ba 3513 SMART SM00823 Phosphopantetheine attachment site 3383 3454 0.0066 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1788 f183e77062822f524f137574db1055ba 3513 Gene3D G3DSA:1.10.1200.10 275 360 4.5E-15 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1788 f183e77062822f524f137574db1055ba 3513 Gene3D G3DSA:1.10.1200.10 2149 2232 1.3E-17 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1788 f183e77062822f524f137574db1055ba 3513 SUPERFAMILY SSF53901 2283 2699 3.95E-89 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1788 f183e77062822f524f137574db1055ba 3513 SUPERFAMILY SSF47336 284 402 1.44E-13 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1788 f183e77062822f524f137574db1055ba 3513 Pfam PF08659 KR domain 3115 3294 2.1E-45 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1788 f183e77062822f524f137574db1055ba 3513 Pfam PF08659 KR domain 1503 1681 1.8E-37 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1788 f183e77062822f524f137574db1055ba 3513 SUPERFAMILY SSF47336 3377 3454 9.95E-10 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1788 f183e77062822f524f137574db1055ba 3513 Pfam PF00550 Phosphopantetheine attachment site 3385 3449 5.3E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1788 f183e77062822f524f137574db1055ba 3513 Pfam PF00550 Phosphopantetheine attachment site 2164 2229 1.2E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1788 f183e77062822f524f137574db1055ba 3513 Pfam PF00550 Phosphopantetheine attachment site 292 356 5.3E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1788 f183e77062822f524f137574db1055ba 3513 SMART SM00826 992 1157 3.8E-20 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1788 f183e77062822f524f137574db1055ba 3513 SUPERFAMILY SSF51735 3113 3340 1.1E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1788 f183e77062822f524f137574db1055ba 3513 SUPERFAMILY SSF53335 1909 2099 7.52E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_1788 f183e77062822f524f137574db1055ba 3513 Pfam PF14765 Polyketide synthase dehydratase 11 264 2.2E-20 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1788 f183e77062822f524f137574db1055ba 3513 Pfam PF14765 Polyketide synthase dehydratase 992 1278 6.6E-63 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1788 f183e77062822f524f137574db1055ba 3513 Gene3D G3DSA:3.30.70.3290 842 963 7.6E-252 T 12-10-2018 BAMF_1788 f183e77062822f524f137574db1055ba 3513 Gene3D G3DSA:3.30.70.3290 2718 2856 6.4E-241 T 12-10-2018 BAMF_1788 f183e77062822f524f137574db1055ba 3513 ProSitePatterns PS00012 Phosphopantetheine attachment site. 315 330 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1788 f183e77062822f524f137574db1055ba 3513 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 2434 2450 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site BAMF_1788 f183e77062822f524f137574db1055ba 3513 Pfam PF08242 Methyltransferase domain 1939 2043 6.4E-18 T 12-10-2018 IPR013217 Methyltransferase type 12 BAMF_1788 f183e77062822f524f137574db1055ba 3513 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 648 764 8.1E-41 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1788 f183e77062822f524f137574db1055ba 3513 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2529 2645 3.4E-40 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1788 f183e77062822f524f137574db1055ba 3513 Gene3D G3DSA:3.40.47.10 2289 2868 6.4E-241 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_3848 ca4b834256432f80d43459819e041d92 502 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 53 166 1.5E-8 T 12-10-2018 IPR000014 PAS domain BAMF_3848 ca4b834256432f80d43459819e041d92 502 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 396 405 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BAMF_3848 ca4b834256432f80d43459819e041d92 502 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 269 284 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BAMF_3848 ca4b834256432f80d43459819e041d92 502 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 479 499 1.3E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BAMF_3848 ca4b834256432f80d43459819e041d92 502 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 462 479 1.3E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BAMF_3848 ca4b834256432f80d43459819e041d92 502 Pfam PF00158 Sigma-54 interaction domain 184 349 6.8E-62 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BAMF_3848 ca4b834256432f80d43459819e041d92 502 SMART SM00382 204 346 1.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3848 ca4b834256432f80d43459819e041d92 502 Gene3D G3DSA:1.10.8.60 354 421 1.2E-21 T 12-10-2018 BAMF_3848 ca4b834256432f80d43459819e041d92 502 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 208 221 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BAMF_3848 ca4b834256432f80d43459819e041d92 502 Gene3D G3DSA:3.30.450.20 49 161 6.6E-12 T 12-10-2018 BAMF_3848 ca4b834256432f80d43459819e041d92 502 Pfam PF02954 Bacterial regulatory protein, Fis family 456 496 5.0E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BAMF_3848 ca4b834256432f80d43459819e041d92 502 SUPERFAMILY SSF52540 184 426 3.13E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3848 ca4b834256432f80d43459819e041d92 502 Pfam PF13426 PAS domain 63 162 6.7E-8 T 12-10-2018 IPR000014 PAS domain BAMF_3848 ca4b834256432f80d43459819e041d92 502 SUPERFAMILY SSF55785 53 155 1.16E-8 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_3848 ca4b834256432f80d43459819e041d92 502 Gene3D G3DSA:1.10.10.60 424 500 4.8E-16 T 12-10-2018 BAMF_3848 ca4b834256432f80d43459819e041d92 502 SUPERFAMILY SSF46689 396 498 6.45E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_3848 ca4b834256432f80d43459819e041d92 502 Gene3D G3DSA:3.40.50.300 169 353 1.2E-60 T 12-10-2018 BAMF_0787 c2cd8703096c62ae8a4d234ce1cb1346 449 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 1.2E-70 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_0787 c2cd8703096c62ae8a4d234ce1cb1346 449 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 417 1.4E-50 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 BAMF_0787 c2cd8703096c62ae8a4d234ce1cb1346 449 Gene3D G3DSA:3.90.110.10 169 449 1.8E-111 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BAMF_0787 c2cd8703096c62ae8a4d234ce1cb1346 449 SUPERFAMILY SSF56327 170 441 1.76E-93 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BAMF_0787 c2cd8703096c62ae8a4d234ce1cb1346 449 Gene3D G3DSA:3.40.50.720 3 168 3.0E-60 T 12-10-2018 BAMF_0787 c2cd8703096c62ae8a4d234ce1cb1346 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 2.6E-59 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_0787 c2cd8703096c62ae8a4d234ce1cb1346 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 76 92 2.6E-59 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_0787 c2cd8703096c62ae8a4d234ce1cb1346 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 2.6E-59 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_0787 c2cd8703096c62ae8a4d234ce1cb1346 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 2.6E-59 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_0787 c2cd8703096c62ae8a4d234ce1cb1346 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 111 131 2.6E-59 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_0787 c2cd8703096c62ae8a4d234ce1cb1346 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 140 157 2.6E-59 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_0787 c2cd8703096c62ae8a4d234ce1cb1346 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 2.6E-59 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_0787 c2cd8703096c62ae8a4d234ce1cb1346 449 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 140 171 - T 12-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 BAMF_0787 c2cd8703096c62ae8a4d234ce1cb1346 449 SUPERFAMILY SSF51735 5 166 1.13E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3517 f8f34a23102d2931b3e000133791dd68 132 SUPERFAMILY SSF51344 3 84 6.02E-25 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3517 f8f34a23102d2931b3e000133791dd68 132 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 82 3.5E-30 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3517 f8f34a23102d2931b3e000133791dd68 132 SUPERFAMILY SSF46604 87 130 7.59E-10 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3517 f8f34a23102d2931b3e000133791dd68 132 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 86 4.0E-36 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3517 f8f34a23102d2931b3e000133791dd68 132 Gene3D G3DSA:1.20.5.440 89 131 6.4E-15 T 12-10-2018 BAMF_3517 f8f34a23102d2931b3e000133791dd68 132 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 86 131 2.0E-15 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain BAMF_3517 f8f34a23102d2931b3e000133791dd68 132 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 130 1.1E-42 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3517 f8f34a23102d2931b3e000133791dd68 132 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 129 23.668 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3517 f8f34a23102d2931b3e000133791dd68 132 Gene3D G3DSA:2.60.15.10 1 88 8.5E-33 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_0270 a97bc3e3273561cf115165aaaab761db 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 265 5.3E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_0270 a97bc3e3273561cf115165aaaab761db 282 SUPERFAMILY SSF161098 86 269 3.14E-38 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_0270 a97bc3e3273561cf115165aaaab761db 282 Gene3D G3DSA:1.10.3720.10 86 275 3.8E-34 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 ProSitePatterns PS00450 Aconitase family signature 1. 409 425 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 SUPERFAMILY SSF52016 613 872 5.69E-88 T 12-10-2018 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 Pfam PF00330 Aconitase family (aconitate hydratase) 52 544 2.3E-173 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 Gene3D G3DSA:3.20.19.10 637 874 4.8E-103 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 6 873 0.0 T 12-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 ProSitePatterns PS01244 Aconitase family signature 2. 475 488 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 SUPERFAMILY SSF53732 8 609 2.62E-217 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 Gene3D G3DSA:3.30.499.10 348 572 2.2E-98 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 Gene3D G3DSA:3.30.499.20 1 347 4.8E-155 T 12-10-2018 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 PRINTS PR00415 Aconitase family signature 144 152 2.4E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 PRINTS PR00415 Aconitase family signature 177 190 2.4E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 PRINTS PR00415 Aconitase family signature 253 266 2.4E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 PRINTS PR00415 Aconitase family signature 191 206 2.4E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 PRINTS PR00415 Aconitase family signature 347 361 2.4E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 PRINTS PR00415 Aconitase family signature 475 488 2.4E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 PRINTS PR00415 Aconitase family signature 120 133 2.4E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 PRINTS PR00415 Aconitase family signature 413 424 2.4E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 PRINTS PR00415 Aconitase family signature 267 280 2.4E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 Gene3D G3DSA:1.10.1440.20 573 634 1.1E-23 T 12-10-2018 BAMF_1886 2e694dfa2fbf95e907a40d588feb6550 875 Pfam PF00694 Aconitase C-terminal domain 674 801 2.7E-46 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 BAMF_1680 c5e84513a38de5ea5de248fab911ebb0 385 Gene3D G3DSA:3.30.1490.20 21 104 2.7E-96 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BAMF_1680 c5e84513a38de5ea5de248fab911ebb0 385 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 12-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BAMF_1680 c5e84513a38de5ea5de248fab911ebb0 385 SUPERFAMILY SSF56059 1 238 1.79E-85 T 12-10-2018 BAMF_1680 c5e84513a38de5ea5de248fab911ebb0 385 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 384 1.0E-167 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BAMF_1680 c5e84513a38de5ea5de248fab911ebb0 385 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 385 44.53 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BAMF_1680 c5e84513a38de5ea5de248fab911ebb0 385 Gene3D G3DSA:3.30.470.20 1 234 2.7E-96 T 12-10-2018 BAMF_1680 c5e84513a38de5ea5de248fab911ebb0 385 Pfam PF00549 CoA-ligase 262 381 3.8E-26 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BAMF_1680 c5e84513a38de5ea5de248fab911ebb0 385 SUPERFAMILY SSF52210 239 384 1.96E-54 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BAMF_1680 c5e84513a38de5ea5de248fab911ebb0 385 PIRSF PIRSF001554 1 385 4.1E-155 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BAMF_1680 c5e84513a38de5ea5de248fab911ebb0 385 Gene3D G3DSA:3.40.50.261 240 385 2.1E-57 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BAMF_1680 c5e84513a38de5ea5de248fab911ebb0 385 Pfam PF08442 ATP-grasp domain 2 203 7.7E-85 T 12-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BAMF_1324 e33b53e5ff34edb05b517892471a027f 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 442 1.6E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1324 e33b53e5ff34edb05b517892471a027f 450 SUPERFAMILY SSF55874 298 442 3.67E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1324 e33b53e5ff34edb05b517892471a027f 450 SMART SM00387 354 448 8.6E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1324 e33b53e5ff34edb05b517892471a027f 450 SMART SM00388 244 309 6.8E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_1324 e33b53e5ff34edb05b517892471a027f 450 SUPERFAMILY SSF47384 228 310 1.24E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_1324 e33b53e5ff34edb05b517892471a027f 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 308 9.1E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_1324 e33b53e5ff34edb05b517892471a027f 450 Gene3D G3DSA:1.10.287.130 181 302 9.7E-17 T 12-10-2018 BAMF_1324 e33b53e5ff34edb05b517892471a027f 450 Gene3D G3DSA:3.30.565.10 303 444 1.7E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2453 661102516d162664933777a1fe7025f0 340 Gene3D G3DSA:1.10.8.60 144 213 2.3E-28 T 12-10-2018 BAMF_2453 661102516d162664933777a1fe7025f0 340 SUPERFAMILY SSF48019 217 336 3.06E-27 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BAMF_2453 661102516d162664933777a1fe7025f0 340 Gene3D G3DSA:1.20.272.10 214 338 1.4E-41 T 12-10-2018 BAMF_2453 661102516d162664933777a1fe7025f0 340 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 15 336 1.8E-88 T 12-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 BAMF_2453 661102516d162664933777a1fe7025f0 340 Gene3D G3DSA:3.40.50.300 1 143 1.8E-47 T 12-10-2018 BAMF_2453 661102516d162664933777a1fe7025f0 340 SUPERFAMILY SSF52540 4 214 7.44E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2453 661102516d162664933777a1fe7025f0 340 Pfam PF06144 DNA polymerase III, delta subunit 18 193 6.8E-51 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 BAMF_1755 3bbd380f9c682918f522908930a8bda7 409 Pfam PF07690 Major Facilitator Superfamily 19 305 7.5E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_1755 3bbd380f9c682918f522908930a8bda7 409 Gene3D G3DSA:1.20.1250.20 3 396 2.1E-64 T 12-10-2018 BAMF_1755 3bbd380f9c682918f522908930a8bda7 409 SUPERFAMILY SSF103473 4 403 2.75E-66 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_1755 3bbd380f9c682918f522908930a8bda7 409 PRINTS PR01035 Tetracycline resistance protein signature 346 369 4.6E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_1755 3bbd380f9c682918f522908930a8bda7 409 PRINTS PR01035 Tetracycline resistance protein signature 170 190 4.6E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_1755 3bbd380f9c682918f522908930a8bda7 409 PRINTS PR01035 Tetracycline resistance protein signature 142 164 4.6E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_1755 3bbd380f9c682918f522908930a8bda7 409 PRINTS PR01035 Tetracycline resistance protein signature 20 36 4.6E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_0607 dea20fbed044af9a84cf3e8a9c89949c 459 SUPERFAMILY SSF103473 20 445 6.15E-42 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0607 dea20fbed044af9a84cf3e8a9c89949c 459 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 23 456 2.0E-150 T 12-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 BAMF_0607 dea20fbed044af9a84cf3e8a9c89949c 459 Gene3D G3DSA:1.20.1250.20 25 439 1.5E-28 T 12-10-2018 BAMF_0607 dea20fbed044af9a84cf3e8a9c89949c 459 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 74 99 - T 12-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 BAMF_0607 dea20fbed044af9a84cf3e8a9c89949c 459 Pfam PF13347 MFS/sugar transport protein 25 443 4.5E-94 T 12-10-2018 BAMF_0132 9b7226fc35730a71e443e0fdf09c3826 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 120 2.5E-49 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0132 9b7226fc35730a71e443e0fdf09c3826 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 120 30.866 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0132 9b7226fc35730a71e443e0fdf09c3826 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 120 1.3E-53 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0132 9b7226fc35730a71e443e0fdf09c3826 120 SUPERFAMILY SSF53137 7 118 6.92E-57 T 12-10-2018 BAMF_0132 9b7226fc35730a71e443e0fdf09c3826 120 Gene3D G3DSA:3.30.420.100 5 120 1.0E-47 T 12-10-2018 BAMF_1063 8757e429f23279f87bd903ba95ef8575 166 Gene3D G3DSA:3.40.50.620 3 166 4.3E-34 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_1063 8757e429f23279f87bd903ba95ef8575 166 SUPERFAMILY SSF52402 5 166 2.76E-30 T 12-10-2018 BAMF_1063 8757e429f23279f87bd903ba95ef8575 166 PRINTS PR01438 Universal stress protein signature 4 22 2.0E-14 T 12-10-2018 IPR006015 Universal stress protein A BAMF_1063 8757e429f23279f87bd903ba95ef8575 166 PRINTS PR01438 Universal stress protein signature 144 166 2.0E-14 T 12-10-2018 IPR006015 Universal stress protein A BAMF_1063 8757e429f23279f87bd903ba95ef8575 166 PRINTS PR01438 Universal stress protein signature 126 138 2.0E-14 T 12-10-2018 IPR006015 Universal stress protein A BAMF_1063 8757e429f23279f87bd903ba95ef8575 166 Pfam PF00582 Universal stress protein family 5 166 7.8E-36 T 12-10-2018 IPR006016 UspA BAMF_1115 bc49584d9ef6b918380d2e3f154a8acd 215 Gene3D G3DSA:3.40.50.720 3 215 6.3E-55 T 12-10-2018 BAMF_1115 bc49584d9ef6b918380d2e3f154a8acd 215 Pfam PF13460 NAD(P)H-binding 8 192 3.9E-50 T 12-10-2018 IPR016040 NAD(P)-binding domain BAMF_1115 bc49584d9ef6b918380d2e3f154a8acd 215 SUPERFAMILY SSF51735 1 202 5.89E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2843 2d75fff0716cc6fda44f6f1875bd74b4 260 SMART SM00382 32 212 7.2E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2843 2d75fff0716cc6fda44f6f1875bd74b4 260 SUPERFAMILY SSF52540 4 227 3.71E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2843 2d75fff0716cc6fda44f6f1875bd74b4 260 Pfam PF00005 ABC transporter 24 162 1.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_2843 2d75fff0716cc6fda44f6f1875bd74b4 260 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_2843 2d75fff0716cc6fda44f6f1875bd74b4 260 Gene3D G3DSA:3.40.50.300 2 228 5.8E-57 T 12-10-2018 BAMF_3556 fd01101e33de36b1a55ade05eb2d6a68 320 Gene3D G3DSA:3.20.20.150 3 308 8.7E-93 T 12-10-2018 BAMF_3556 fd01101e33de36b1a55ade05eb2d6a68 320 SUPERFAMILY SSF51658 61 253 4.97E-18 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily BAMF_3556 fd01101e33de36b1a55ade05eb2d6a68 320 Hamap MF_00606 UV DNA damage endonuclease [uvsE]. 12 304 39.124 T 12-10-2018 IPR023520 UV-endonuclease UvdE, bacterial GO:0004519|GO:0009411 BAMF_3556 fd01101e33de36b1a55ade05eb2d6a68 320 Pfam PF03851 UV-endonuclease UvdE 5 274 2.3E-111 T 12-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 BAMF_3556 fd01101e33de36b1a55ade05eb2d6a68 320 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 1 303 1.2E-130 T 12-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 BAMF_2468 28bd120a7fe211e9a52f384732f02236 243 Gene3D G3DSA:3.40.50.1110 17 237 3.0E-40 T 12-10-2018 IPR036514 SGNH hydrolase superfamily BAMF_2468 28bd120a7fe211e9a52f384732f02236 243 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 27 230 1.0E-23 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain BAMF_2468 28bd120a7fe211e9a52f384732f02236 243 SUPERFAMILY SSF52266 23 236 8.33E-38 T 12-10-2018 BAMF_3376 7c23a965eecd120eeff450ad2a024ac8 506 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 225 492 8.4E-50 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 BAMF_3376 7c23a965eecd120eeff450ad2a024ac8 506 Pfam PF07196 Flagellin hook IN motif 123 185 6.5E-7 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BAMF_3376 7c23a965eecd120eeff450ad2a024ac8 506 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 104 1.4E-23 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 PRINTS PR00473 Galactokinase signature 26 44 4.2E-26 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 PRINTS PR00473 Galactokinase signature 91 102 4.2E-26 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 PRINTS PR00473 Galactokinase signature 112 130 4.2E-26 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 PRINTS PR00473 Galactokinase signature 269 283 4.2E-26 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 PIRSF PIRSF000530 1 388 2.3E-117 T 12-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 SUPERFAMILY SSF54211 3 202 4.02E-61 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 ProSitePatterns PS00106 Galactokinase signature. 26 37 - T 12-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 Pfam PF08544 GHMP kinases C terminal 291 364 8.6E-10 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 TIGRFAM TIGR00131 gal_kin: galactokinase 3 386 5.2E-138 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 PRINTS PR00959 Mevalonate kinase family signature 333 350 4.9E-43 T 12-10-2018 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 PRINTS PR00959 Mevalonate kinase family signature 24 48 4.9E-43 T 12-10-2018 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 PRINTS PR00959 Mevalonate kinase family signature 119 141 4.9E-43 T 12-10-2018 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 PRINTS PR00959 Mevalonate kinase family signature 162 181 4.9E-43 T 12-10-2018 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 Pfam PF00288 GHMP kinases N terminal domain 114 181 3.2E-13 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 Gene3D G3DSA:3.30.230.10 21 201 7.4E-132 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 Hamap MF_00246 Galactokinase [galK]. 24 386 45.297 T 12-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 Gene3D G3DSA:3.30.70.890 202 360 7.4E-132 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 Pfam PF10509 Galactokinase galactose-binding signature 8 56 1.0E-22 T 12-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BAMF_3656 a872714fb9e7575a2db6adf0460de95f 394 SUPERFAMILY SSF55060 205 385 1.27E-51 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BAMF_1181 458f59ce1b6d2410d7ea0da612597144 283 Gene3D G3DSA:3.40.50.10440 5 136 1.6E-45 T 12-10-2018 BAMF_1181 458f59ce1b6d2410d7ea0da612597144 283 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 281 2.2E-86 T 12-10-2018 IPR003797 DegV BAMF_1181 458f59ce1b6d2410d7ea0da612597144 283 Gene3D G3DSA:3.30.1180.10 156 283 1.4E-45 T 12-10-2018 BAMF_1181 458f59ce1b6d2410d7ea0da612597144 283 SUPERFAMILY SSF82549 1 282 4.19E-87 T 12-10-2018 BAMF_1181 458f59ce1b6d2410d7ea0da612597144 283 Gene3D G3DSA:2.20.28.50 28 62 1.6E-45 T 12-10-2018 BAMF_1181 458f59ce1b6d2410d7ea0da612597144 283 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 280 3.3E-93 T 12-10-2018 IPR003797 DegV BAMF_3787 79097b875ef2ca006de8c8b3cd969f2c 271 Gene3D G3DSA:2.60.120.10 18 126 5.5E-36 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_3787 79097b875ef2ca006de8c8b3cd969f2c 271 Hamap MF_01673 5-deoxy-glucuronate isomerase [iolB]. 1 271 62.225 T 12-10-2018 IPR023770 5-deoxy-glucuronate isomerase, Bacilli GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 BAMF_3787 79097b875ef2ca006de8c8b3cd969f2c 271 SUPERFAMILY SSF51182 5 257 1.09E-71 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BAMF_3787 79097b875ef2ca006de8c8b3cd969f2c 271 Gene3D G3DSA:2.60.120.10 127 271 6.5E-60 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_3787 79097b875ef2ca006de8c8b3cd969f2c 271 Pfam PF04962 KduI/IolB family 12 268 1.1E-107 T 12-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BAMF_3787 79097b875ef2ca006de8c8b3cd969f2c 271 PIRSF PIRSF036628 1 271 3.1E-114 T 12-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 BAMF_3787 79097b875ef2ca006de8c8b3cd969f2c 271 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 21 268 5.6E-109 T 12-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 BAMF_0896 24263dd6fc1d90c207f16bb73206506d 79 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 70 1.3E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_0896 24263dd6fc1d90c207f16bb73206506d 79 Gene3D G3DSA:1.10.260.40 8 71 2.1E-11 T 12-10-2018 BAMF_0896 24263dd6fc1d90c207f16bb73206506d 79 SMART SM00530 11 66 1.4E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_0896 24263dd6fc1d90c207f16bb73206506d 79 SUPERFAMILY SSF47413 11 71 1.69E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_0509 ab45e321c9632f5c83ac21ed36e02843 231 Gene3D G3DSA:1.20.120.530 78 225 3.8E-26 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BAMF_0509 ab45e321c9632f5c83ac21ed36e02843 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 5.2E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0509 ab45e321c9632f5c83ac21ed36e02843 231 Pfam PF07729 FCD domain 84 208 3.8E-24 T 12-10-2018 IPR011711 GntR, C-terminal BAMF_0509 ab45e321c9632f5c83ac21ed36e02843 231 Gene3D G3DSA:1.10.10.10 11 74 5.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0509 ab45e321c9632f5c83ac21ed36e02843 231 SMART SM00895 84 209 1.8E-17 T 12-10-2018 IPR011711 GntR, C-terminal BAMF_0509 ab45e321c9632f5c83ac21ed36e02843 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.2E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0509 ab45e321c9632f5c83ac21ed36e02843 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.2E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0509 ab45e321c9632f5c83ac21ed36e02843 231 SUPERFAMILY SSF46785 6 78 3.29E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0509 ab45e321c9632f5c83ac21ed36e02843 231 SUPERFAMILY SSF48008 80 217 1.15E-26 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BAMF_0509 ab45e321c9632f5c83ac21ed36e02843 231 SMART SM00345 16 74 1.0E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_2516 a0d51a0152e4e17a2011b22460655f86 652 Gene3D G3DSA:3.40.50.2300 1 104 1.4E-42 T 12-10-2018 BAMF_2516 a0d51a0152e4e17a2011b22460655f86 652 SUPERFAMILY SSF55804 503 650 1.03E-38 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BAMF_2516 a0d51a0152e4e17a2011b22460655f86 652 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 509 635 2.4E-38 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 BAMF_2516 a0d51a0152e4e17a2011b22460655f86 652 Pfam PF02378 Phosphotransferase system, EIIC 128 403 7.8E-19 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BAMF_2516 a0d51a0152e4e17a2011b22460655f86 652 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 112 458 6.0E-94 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 BAMF_2516 a0d51a0152e4e17a2011b22460655f86 652 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 7.3E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BAMF_2516 a0d51a0152e4e17a2011b22460655f86 652 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 553 569 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain BAMF_2516 a0d51a0152e4e17a2011b22460655f86 652 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 650 9.3E-35 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BAMF_2516 a0d51a0152e4e17a2011b22460655f86 652 Gene3D G3DSA:3.40.930.10 497 652 6.1E-42 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BAMF_2516 a0d51a0152e4e17a2011b22460655f86 652 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 86 4.0E-31 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 BAMF_2516 a0d51a0152e4e17a2011b22460655f86 652 SUPERFAMILY SSF52794 2 103 5.76E-38 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BAMF_0792 17489b50a5c1c156dba7c658b8fce46a 605 SUPERFAMILY SSF90123 32 349 1.02E-86 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_0792 17489b50a5c1c156dba7c658b8fce46a 605 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0792 17489b50a5c1c156dba7c658b8fce46a 605 Pfam PF00005 ABC transporter 382 531 1.1E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0792 17489b50a5c1c156dba7c658b8fce46a 605 Pfam PF00664 ABC transporter transmembrane region 50 320 2.3E-64 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BAMF_0792 17489b50a5c1c156dba7c658b8fce46a 605 SMART SM00382 391 577 2.0E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0792 17489b50a5c1c156dba7c658b8fce46a 605 SUPERFAMILY SSF52540 355 602 6.63E-90 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0792 17489b50a5c1c156dba7c658b8fce46a 605 Gene3D G3DSA:1.20.1560.10 15 352 8.7E-109 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_0792 17489b50a5c1c156dba7c658b8fce46a 605 Gene3D G3DSA:3.40.50.300 357 605 4.9E-90 T 12-10-2018 BAMF_2284 1bf17220b13905af55b170304af7780b 308 Gene3D G3DSA:3.60.15.10 1 305 2.7E-108 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_2284 1bf17220b13905af55b170304af7780b 308 Pfam PF12706 Beta-lactamase superfamily domain 35 151 1.2E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_2284 1bf17220b13905af55b170304af7780b 308 Pfam PF12706 Beta-lactamase superfamily domain 201 270 8.9E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_2284 1bf17220b13905af55b170304af7780b 308 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 304 1.8E-120 T 12-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 BAMF_2284 1bf17220b13905af55b170304af7780b 308 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 41.946 T 12-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 BAMF_2284 1bf17220b13905af55b170304af7780b 308 SUPERFAMILY SSF56281 2 305 8.12E-88 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_2283 493072d5ce3abcc6e97282ec868fcfa0 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2283 493072d5ce3abcc6e97282ec868fcfa0 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 2.4E-19 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2283 493072d5ce3abcc6e97282ec868fcfa0 49 Pfam PF00471 Ribosomal protein L33 3 49 2.4E-22 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2283 493072d5ce3abcc6e97282ec868fcfa0 49 Gene3D G3DSA:2.20.28.120 1 49 4.4E-23 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2283 493072d5ce3abcc6e97282ec868fcfa0 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 18.331 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2283 493072d5ce3abcc6e97282ec868fcfa0 49 SUPERFAMILY SSF57829 1 49 1.71E-18 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BAMF_0811 ed6cc2486ed0752a22d39916caae9b48 104 Pfam PF08838 Protein of unknown function (DUF1811) 3 101 2.1E-41 T 12-10-2018 IPR014938 Protein of unknown function DUF1811 BAMF_0811 ed6cc2486ed0752a22d39916caae9b48 104 SUPERFAMILY SSF101697 1 103 5.62E-46 T 12-10-2018 IPR036289 Hypothetical protein YfhH BAMF_0811 ed6cc2486ed0752a22d39916caae9b48 104 Gene3D G3DSA:1.10.287.880 1 50 1.3E-27 T 12-10-2018 BAMF_0811 ed6cc2486ed0752a22d39916caae9b48 104 Gene3D G3DSA:2.30.30.340 51 104 3.0E-25 T 12-10-2018 BAMF_1104 797fac3e9abbc3e336621c38c0e67711 713 Pfam PF00912 Transglycosylase 55 229 2.9E-65 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_1104 797fac3e9abbc3e336621c38c0e67711 713 Gene3D G3DSA:3.90.1310.20 50 503 4.4E-197 T 12-10-2018 BAMF_1104 797fac3e9abbc3e336621c38c0e67711 713 Gene3D G3DSA:1.10.3810.10 65 254 4.4E-197 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_1104 797fac3e9abbc3e336621c38c0e67711 713 SUPERFAMILY SSF53955 44 253 1.97E-74 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BAMF_1104 797fac3e9abbc3e336621c38c0e67711 713 SUPERFAMILY SSF56601 211 611 2.21E-104 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_1104 797fac3e9abbc3e336621c38c0e67711 713 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 597 2.4E-183 T 12-10-2018 BAMF_1104 797fac3e9abbc3e336621c38c0e67711 713 Gene3D G3DSA:3.40.710.10 295 607 4.4E-197 T 12-10-2018 BAMF_1104 797fac3e9abbc3e336621c38c0e67711 713 Pfam PF00905 Penicillin binding protein transpeptidase domain 321 593 4.0E-44 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BAMF_1504 4133707d72bf1bd1be56e4ec49ecdb5d 430 SMART SM00852 189 327 2.2E-35 T 12-10-2018 IPR001453 MoaB/Mog domain BAMF_1504 4133707d72bf1bd1be56e4ec49ecdb5d 430 Pfam PF00994 Probable molybdopterin binding domain 189 326 2.8E-23 T 12-10-2018 IPR001453 MoaB/Mog domain BAMF_1504 4133707d72bf1bd1be56e4ec49ecdb5d 430 Gene3D G3DSA:2.40.340.10 337 406 2.0E-116 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BAMF_1504 4133707d72bf1bd1be56e4ec49ecdb5d 430 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 176 9.9E-41 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BAMF_1504 4133707d72bf1bd1be56e4ec49ecdb5d 430 Gene3D G3DSA:3.90.105.10 26 183 2.0E-116 T 12-10-2018 BAMF_1504 4133707d72bf1bd1be56e4ec49ecdb5d 430 SUPERFAMILY SSF63882 8 185 4.58E-52 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BAMF_1504 4133707d72bf1bd1be56e4ec49ecdb5d 430 SUPERFAMILY SSF53218 186 328 3.53E-37 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily BAMF_1504 4133707d72bf1bd1be56e4ec49ecdb5d 430 SUPERFAMILY SSF63867 339 413 5.1E-18 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BAMF_1504 4133707d72bf1bd1be56e4ec49ecdb5d 430 Pfam PF03454 MoeA C-terminal region (domain IV) 341 410 1.3E-17 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BAMF_1504 4133707d72bf1bd1be56e4ec49ecdb5d 430 Gene3D G3DSA:3.40.980.10 184 336 2.0E-116 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily BAMF_1504 4133707d72bf1bd1be56e4ec49ecdb5d 430 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 186 323 4.5E-31 T 12-10-2018 IPR001453 MoaB/Mog domain BAMF_1504 4133707d72bf1bd1be56e4ec49ecdb5d 430 Gene3D G3DSA:2.170.190.11 50 150 2.0E-116 T 12-10-2018 BAMF_1640 b0da3d5e1952e828ceebd5981b6e8443 204 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 37.182 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 BAMF_1640 b0da3d5e1952e828ceebd5981b6e8443 204 SUPERFAMILY SSF52540 3 192 2.15E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1640 b0da3d5e1952e828ceebd5981b6e8443 204 Gene3D G3DSA:3.30.63.10 37 96 6.5E-69 T 12-10-2018 BAMF_1640 b0da3d5e1952e828ceebd5981b6e8443 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 4.9E-74 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 BAMF_1640 b0da3d5e1952e828ceebd5981b6e8443 204 SMART SM00072 4 187 1.3E-82 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BAMF_1640 b0da3d5e1952e828ceebd5981b6e8443 204 Pfam PF00625 Guanylate kinase 7 183 1.3E-54 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BAMF_1640 b0da3d5e1952e828ceebd5981b6e8443 204 Gene3D G3DSA:3.40.50.300 9 183 6.5E-69 T 12-10-2018 BAMF_1640 b0da3d5e1952e828ceebd5981b6e8443 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 12-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 BAMF_2984 6750aa6afa19b8e336b924358ae25c9f 1491 SUPERFAMILY SSF52540 954 1167 4.3E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2984 6750aa6afa19b8e336b924358ae25c9f 1491 Gene3D G3DSA:3.40.50.300 956 1243 1.5E-62 T 12-10-2018 BAMF_2984 6750aa6afa19b8e336b924358ae25c9f 1491 Gene3D G3DSA:3.40.50.300 1255 1483 5.4E-21 T 12-10-2018 BAMF_2984 6750aa6afa19b8e336b924358ae25c9f 1491 Pfam PF12538 DNA transporter 3 121 9.4E-23 T 12-10-2018 IPR022206 Firmicutes EssC, N-terminal BAMF_2984 6750aa6afa19b8e336b924358ae25c9f 1491 TIGRFAM TIGR03928 T7_EssCb_Firm: type VII secretion protein EssC 206 1481 0.0 T 12-10-2018 IPR023839 Firmicutes EssC, C-terminal BAMF_2984 6750aa6afa19b8e336b924358ae25c9f 1491 Pfam PF01580 FtsK/SpoIIIE family 640 852 2.3E-30 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 BAMF_2984 6750aa6afa19b8e336b924358ae25c9f 1491 Pfam PF01580 FtsK/SpoIIIE family 1260 1371 1.9E-6 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 BAMF_2984 6750aa6afa19b8e336b924358ae25c9f 1491 Pfam PF01580 FtsK/SpoIIIE family 982 1162 4.6E-24 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 BAMF_2984 6750aa6afa19b8e336b924358ae25c9f 1491 SUPERFAMILY SSF52540 639 897 8.8E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2984 6750aa6afa19b8e336b924358ae25c9f 1491 Gene3D G3DSA:3.40.50.300 617 947 3.3E-78 T 12-10-2018 BAMF_2984 6750aa6afa19b8e336b924358ae25c9f 1491 SUPERFAMILY SSF52540 1238 1389 7.83E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2711 6b5cf94daf162679f132a7df3d10e9e0 278 Pfam PF06827 Zinc finger found in FPG and IleRS 249 276 5.9E-12 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 BAMF_2711 6b5cf94daf162679f132a7df3d10e9e0 278 ProSitePatterns PS01242 Zinc finger FPG-type signature. 251 275 - T 12-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 BAMF_2711 6b5cf94daf162679f132a7df3d10e9e0 278 SMART SM00898 4 120 2.1E-51 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BAMF_2711 6b5cf94daf162679f132a7df3d10e9e0 278 Gene3D G3DSA:1.10.8.50 138 277 1.4E-50 T 12-10-2018 BAMF_2711 6b5cf94daf162679f132a7df3d10e9e0 278 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 3 275 6.8E-116 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 BAMF_2711 6b5cf94daf162679f132a7df3d10e9e0 278 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 4 119 3.2E-33 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BAMF_2711 6b5cf94daf162679f132a7df3d10e9e0 278 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 3 276 44.888 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 BAMF_2711 6b5cf94daf162679f132a7df3d10e9e0 278 Gene3D G3DSA:3.20.190.10 4 131 2.8E-41 T 12-10-2018 IPR035937 MutM-like, N-terminal BAMF_2711 6b5cf94daf162679f132a7df3d10e9e0 278 SUPERFAMILY SSF57716 225 276 6.32E-17 T 12-10-2018 BAMF_2711 6b5cf94daf162679f132a7df3d10e9e0 278 SMART SM01232 136 228 8.4E-50 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BAMF_2711 6b5cf94daf162679f132a7df3d10e9e0 278 SUPERFAMILY SSF81624 4 140 3.01E-42 T 12-10-2018 IPR035937 MutM-like, N-terminal BAMF_2711 6b5cf94daf162679f132a7df3d10e9e0 278 SUPERFAMILY SSF46946 136 225 1.18E-30 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BAMF_2711 6b5cf94daf162679f132a7df3d10e9e0 278 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 136 225 5.1E-33 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BAMF_0094 b10e38e032d3a2601c5c3e029ea8014e 466 SUPERFAMILY SSF47323 320 464 1.08E-35 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_0094 b10e38e032d3a2601c5c3e029ea8014e 466 SMART SM00840 353 416 3.2E-18 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BAMF_0094 b10e38e032d3a2601c5c3e029ea8014e 466 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 464 7.9E-199 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 BAMF_0094 b10e38e032d3a2601c5c3e029ea8014e 466 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 465 38.998 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 BAMF_0094 b10e38e032d3a2601c5c3e029ea8014e 466 Gene3D G3DSA:1.20.120.640 306 464 4.1E-36 T 12-10-2018 BAMF_0094 b10e38e032d3a2601c5c3e029ea8014e 466 Pfam PF09190 DALR domain 353 412 1.1E-16 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BAMF_0094 b10e38e032d3a2601c5c3e029ea8014e 466 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 313 2.5E-140 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 BAMF_0094 b10e38e032d3a2601c5c3e029ea8014e 466 Gene3D G3DSA:3.40.50.620 1 305 2.4E-134 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_0094 b10e38e032d3a2601c5c3e029ea8014e 466 SUPERFAMILY SSF52374 4 314 5.09E-103 T 12-10-2018 BAMF_0094 b10e38e032d3a2601c5c3e029ea8014e 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 4.9E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BAMF_0094 b10e38e032d3a2601c5c3e029ea8014e 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 4.9E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BAMF_0094 b10e38e032d3a2601c5c3e029ea8014e 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 4.9E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BAMF_0094 b10e38e032d3a2601c5c3e029ea8014e 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 4.9E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BAMF_0848 96b81e9e183019e890e053a408c61d8a 240 Pfam PF00574 Clp protease 56 190 1.2E-33 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BAMF_0848 96b81e9e183019e890e053a408c61d8a 240 Gene3D G3DSA:3.90.226.10 4 194 6.1E-47 T 12-10-2018 BAMF_0848 96b81e9e183019e890e053a408c61d8a 240 SUPERFAMILY SSF52096 21 194 1.41E-46 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_0848 96b81e9e183019e890e053a408c61d8a 240 PRINTS PR00127 Clp protease catalytic subunit P signature 58 78 2.5E-12 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BAMF_0848 96b81e9e183019e890e053a408c61d8a 240 PRINTS PR00127 Clp protease catalytic subunit P signature 167 186 2.5E-12 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BAMF_0848 96b81e9e183019e890e053a408c61d8a 240 PRINTS PR00127 Clp protease catalytic subunit P signature 89 106 2.5E-12 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BAMF_3524 7c046aca572b4189acd7381f2b83764c 244 Gene3D G3DSA:1.20.120.220 70 244 1.4E-41 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3524 7c046aca572b4189acd7381f2b83764c 244 SUPERFAMILY SSF81336 72 237 1.01E-41 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3524 7c046aca572b4189acd7381f2b83764c 244 Pfam PF00119 ATP synthase A chain 20 237 5.0E-58 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3524 7c046aca572b4189acd7381f2b83764c 244 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 15 239 3.9E-53 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3524 7c046aca572b4189acd7381f2b83764c 244 PRINTS PR00123 ATP synthase A subunit signature 78 94 2.5E-18 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3524 7c046aca572b4189acd7381f2b83764c 244 PRINTS PR00123 ATP synthase A subunit signature 146 161 2.5E-18 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3524 7c046aca572b4189acd7381f2b83764c 244 PRINTS PR00123 ATP synthase A subunit signature 162 184 2.5E-18 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3524 7c046aca572b4189acd7381f2b83764c 244 PRINTS PR00123 ATP synthase A subunit signature 223 238 2.5E-18 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3524 7c046aca572b4189acd7381f2b83764c 244 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 243 14.321 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3524 7c046aca572b4189acd7381f2b83764c 244 ProSitePatterns PS00449 ATP synthase a subunit signature. 165 174 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_2399 65a8c156c3119791ef3f583cc4f0b64b 716 Gene3D G3DSA:1.10.10.1230 93 195 9.0E-234 T 12-10-2018 BAMF_2399 65a8c156c3119791ef3f583cc4f0b64b 716 SUPERFAMILY SSF56519 63 319 1.44E-36 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BAMF_2399 65a8c156c3119791ef3f583cc4f0b64b 716 Gene3D G3DSA:3.40.710.10 320 666 9.0E-234 T 12-10-2018 BAMF_2399 65a8c156c3119791ef3f583cc4f0b64b 716 Pfam PF00905 Penicillin binding protein transpeptidase domain 353 680 7.6E-72 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BAMF_2399 65a8c156c3119791ef3f583cc4f0b64b 716 Gene3D G3DSA:3.90.1310.30 68 573 9.0E-234 T 12-10-2018 BAMF_2399 65a8c156c3119791ef3f583cc4f0b64b 716 SUPERFAMILY SSF56601 320 664 7.44E-63 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_2399 65a8c156c3119791ef3f583cc4f0b64b 716 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 305 6.7E-36 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 SUPERFAMILY SSF52540 802 1009 5.21E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 Gene3D G3DSA:3.90.1150.50 1020 1177 6.6E-43 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 Gene3D G3DSA:3.40.50.300 562 801 2.6E-246 T 12-10-2018 BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 Gene3D G3DSA:3.40.50.300 498 1009 2.6E-246 T 12-10-2018 BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 157 1097 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 Pfam PF00270 DEAD/DEAH box helicase 625 784 3.4E-17 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 SMART SM01058 499 596 2.7E-50 T 12-10-2018 IPR003711 CarD-like/TRCF domain BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 SMART SM00490 846 930 5.3E-20 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 Pfam PF03461 TRCF domain 1026 1117 1.4E-25 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 SUPERFAMILY SSF141259 491 568 2.22E-26 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 SUPERFAMILY SSF52540 377 490 1.59E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 Pfam PF02559 CarD-like/TRCF domain 500 595 1.4E-31 T 12-10-2018 IPR003711 CarD-like/TRCF domain BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 Gene3D G3DSA:3.40.50.11180 35 331 6.8E-68 T 12-10-2018 BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 SUPERFAMILY SSF143517 1011 1169 3.92E-36 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 SMART SM00487 620 810 1.8E-35 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 Gene3D G3DSA:3.30.2060.10 140 225 6.8E-68 T 12-10-2018 BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 SUPERFAMILY SSF52540 543 803 2.37E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 Pfam PF00271 Helicase conserved C-terminal domain 828 929 3.9E-18 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 SUPERFAMILY SSF52540 14 368 1.29E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 Gene3D G3DSA:2.30.30.840 503 561 2.6E-246 T 12-10-2018 BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 42 1118 28.993 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 BAMF_0055 a3f0ae4f68a33b290d6ebb84012820c2 1177 SMART SM00982 1024 1124 8.5E-35 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BAMF_1627 27e51b75d86ae2eac5be5e66fcf536ec 210 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 7 177 2.0E-54 T 12-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_1627 27e51b75d86ae2eac5be5e66fcf536ec 210 SUPERFAMILY SSF53271 7 204 2.23E-54 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BAMF_1627 27e51b75d86ae2eac5be5e66fcf536ec 210 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 210 30.686 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_1627 27e51b75d86ae2eac5be5e66fcf536ec 210 Pfam PF00156 Phosphoribosyl transferase domain 44 158 2.2E-18 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BAMF_1627 27e51b75d86ae2eac5be5e66fcf536ec 210 Gene3D G3DSA:3.40.50.2020 1 210 6.7E-65 T 12-10-2018 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 Gene3D G3DSA:3.30.470.90 74 314 4.8E-104 T 12-10-2018 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 663 2.2E-285 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 Gene3D G3DSA:1.10.287.610 2 73 4.1E-29 T 12-10-2018 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 594 664 1.2E-13 T 12-10-2018 IPR001357 BRCT domain BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 319 395 1.4E-33 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 SMART SM00278 442 461 200.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 SMART SM00278 540 559 1.6 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 SMART SM00278 476 495 140.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 Gene3D G3DSA:1.10.150.20 501 579 3.2E-26 T 12-10-2018 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 328 343 - T 12-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 SUPERFAMILY SSF47781 401 580 7.78E-65 T 12-10-2018 IPR010994 RuvA domain 2-like BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 SUPERFAMILY SSF50249 314 397 5.31E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 SMART SM00532 6 444 2.7E-297 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 Gene3D G3DSA:1.10.150.20 428 500 5.8E-30 T 12-10-2018 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 Hamap MF_01588 DNA ligase [ligA]. 5 667 54.245 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 Gene3D G3DSA:2.20.70.80 388 425 1.1E-11 T 12-10-2018 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 SUPERFAMILY SSF52113 590 667 5.67E-20 T 12-10-2018 IPR036420 BRCT domain superfamily BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 Pfam PF12826 Helix-hairpin-helix motif 506 568 5.5E-25 T 12-10-2018 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 Gene3D G3DSA:3.40.50.10190 580 668 2.8E-26 T 12-10-2018 IPR036420 BRCT domain superfamily BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 SMART SM00292 593 669 4.2E-11 T 12-10-2018 IPR001357 BRCT domain BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 6 315 2.3E-138 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 405 430 4.4E-9 T 12-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 PIRSF PIRSF001604 1 669 1.5E-263 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 SUPERFAMILY SSF56091 2 313 8.32E-124 T 12-10-2018 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 Gene3D G3DSA:2.40.50.140 315 387 6.7E-30 T 12-10-2018 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 Pfam PF14520 Helix-hairpin-helix domain 444 498 5.5E-4 T 12-10-2018 BAMF_0657 88a45d548a68bdc73bcb8e5543ef3763 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 12-10-2018 IPR018239 NAD-dependent DNA ligase, active site BAMF_3359 0b92d7b4160dff62ef68bb9abac88dd7 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 2.5E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_3359 0b92d7b4160dff62ef68bb9abac88dd7 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 2.5E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_3359 0b92d7b4160dff62ef68bb9abac88dd7 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 7.4E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_3359 0b92d7b4160dff62ef68bb9abac88dd7 189 SUPERFAMILY SSF46689 3 67 1.39E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_3359 0b92d7b4160dff62ef68bb9abac88dd7 189 Gene3D G3DSA:1.10.357.10 2 186 3.3E-27 T 12-10-2018 BAMF_1576 bc97ae2a4c10698630abc6b7b7110cf5 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 4.4E-52 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BAMF_1576 bc97ae2a4c10698630abc6b7b7110cf5 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 4.4E-52 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BAMF_1576 bc97ae2a4c10698630abc6b7b7110cf5 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 4.4E-52 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BAMF_1576 bc97ae2a4c10698630abc6b7b7110cf5 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 4.4E-52 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BAMF_1576 bc97ae2a4c10698630abc6b7b7110cf5 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 4.4E-52 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BAMF_1576 bc97ae2a4c10698630abc6b7b7110cf5 160 Gene3D G3DSA:3.40.50.620 1 160 1.9E-57 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_1576 bc97ae2a4c10698630abc6b7b7110cf5 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 3.3E-18 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BAMF_1576 bc97ae2a4c10698630abc6b7b7110cf5 160 SUPERFAMILY SSF52374 4 157 1.49E-42 T 12-10-2018 BAMF_1576 bc97ae2a4c10698630abc6b7b7110cf5 160 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 0.005 T 12-10-2018 BAMF_1576 bc97ae2a4c10698630abc6b7b7110cf5 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.502 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BAMF_1576 bc97ae2a4c10698630abc6b7b7110cf5 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 158 1.0E-61 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BAMF_1576 bc97ae2a4c10698630abc6b7b7110cf5 160 Pfam PF01467 Cytidylyltransferase-like 7 134 1.3E-19 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BAMF_2653 29c4b1170681b2e4c6bdb38c879127bf 409 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_2653 29c4b1170681b2e4c6bdb38c879127bf 409 SUPERFAMILY SSF55021 330 403 5.8E-23 T 12-10-2018 BAMF_2653 29c4b1170681b2e4c6bdb38c879127bf 409 Gene3D G3DSA:3.40.1160.10 1 253 2.2E-90 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BAMF_2653 29c4b1170681b2e4c6bdb38c879127bf 409 Pfam PF13840 ACT domain 335 398 1.0E-15 T 12-10-2018 IPR027795 CASTOR, ACT domain BAMF_2653 29c4b1170681b2e4c6bdb38c879127bf 409 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 59 401 5.8E-126 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_2653 29c4b1170681b2e4c6bdb38c879127bf 409 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 402 4.3E-157 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_2653 29c4b1170681b2e4c6bdb38c879127bf 409 PIRSF PIRSF000726 53 409 3.7E-140 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_2653 29c4b1170681b2e4c6bdb38c879127bf 409 PIRSF PIRSF000726 1 60 4.4E-21 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_2653 29c4b1170681b2e4c6bdb38c879127bf 409 SUPERFAMILY SSF53633 3 242 1.14E-72 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BAMF_2653 29c4b1170681b2e4c6bdb38c879127bf 409 Gene3D G3DSA:3.30.70.260 260 337 4.1E-49 T 12-10-2018 BAMF_2653 29c4b1170681b2e4c6bdb38c879127bf 409 Gene3D G3DSA:3.30.70.260 254 402 4.1E-49 T 12-10-2018 BAMF_2653 29c4b1170681b2e4c6bdb38c879127bf 409 Pfam PF01842 ACT domain 275 326 2.4E-8 T 12-10-2018 IPR002912 ACT domain BAMF_2653 29c4b1170681b2e4c6bdb38c879127bf 409 Pfam PF00696 Amino acid kinase family 3 229 1.4E-53 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BAMF_2653 29c4b1170681b2e4c6bdb38c879127bf 409 SUPERFAMILY SSF55021 249 325 3.1E-14 T 12-10-2018 BAMF_0712 56530560728f044c36339a4d3398837f 376 Pfam PF00270 DEAD/DEAH box helicase 28 192 9.7E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BAMF_0712 56530560728f044c36339a4d3398837f 376 Gene3D G3DSA:3.40.50.300 211 370 2.7E-37 T 12-10-2018 BAMF_0712 56530560728f044c36339a4d3398837f 376 SUPERFAMILY SSF52540 72 354 3.06E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0712 56530560728f044c36339a4d3398837f 376 Pfam PF00271 Helicase conserved C-terminal domain 230 335 4.0E-22 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_0712 56530560728f044c36339a4d3398837f 376 SMART SM00487 23 220 4.7E-51 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_0712 56530560728f044c36339a4d3398837f 376 SMART SM00490 255 335 2.3E-22 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_0712 56530560728f044c36339a4d3398837f 376 Gene3D G3DSA:3.40.50.300 3 208 8.0E-62 T 12-10-2018 BAMF_0603 e4d26617d9564412fab1dd28cb902f2e 761 SUPERFAMILY SSF47090 217 273 3.77E-14 T 12-10-2018 IPR036365 PGBD-like superfamily BAMF_0603 e4d26617d9564412fab1dd28cb902f2e 761 SUPERFAMILY SSF51445 282 459 7.79E-36 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_0603 e4d26617d9564412fab1dd28cb902f2e 761 Pfam PF08924 Domain of unknown function (DUF1906) 294 414 3.8E-33 T 12-10-2018 IPR015020 Protein of unknown function DUF1906 BAMF_0603 e4d26617d9564412fab1dd28cb902f2e 761 Gene3D G3DSA:3.20.20.80 278 484 1.1E-52 T 12-10-2018 BAMF_0603 e4d26617d9564412fab1dd28cb902f2e 761 SUPERFAMILY SSF47090 77 136 3.27E-13 T 12-10-2018 IPR036365 PGBD-like superfamily BAMF_0603 e4d26617d9564412fab1dd28cb902f2e 761 Pfam PF01471 Putative peptidoglycan binding domain 217 271 1.1E-11 T 12-10-2018 IPR002477 Peptidoglycan binding-like BAMF_0603 e4d26617d9564412fab1dd28cb902f2e 761 Pfam PF01471 Putative peptidoglycan binding domain 79 135 1.2E-9 T 12-10-2018 IPR002477 Peptidoglycan binding-like BAMF_0603 e4d26617d9564412fab1dd28cb902f2e 761 Gene3D G3DSA:1.10.101.10 69 143 8.6E-10 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BAMF_0603 e4d26617d9564412fab1dd28cb902f2e 761 Gene3D G3DSA:1.10.101.10 203 277 9.7E-13 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BAMF_3300 6d5f9e893cc9cc156ce5d24ad469eabe 104 Pfam PF07252 Protein of unknown function (DUF1433) 25 77 1.1E-11 T 12-10-2018 IPR009881 Protein of unknown function DUF1433 BAMF_3300 6d5f9e893cc9cc156ce5d24ad469eabe 104 Gene3D G3DSA:3.10.450.130 22 102 5.6E-13 T 12-10-2018 BAMF_3346 e1356cef4b16bae01c9218d90a1196cb 241 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 226 3.8E-18 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 BAMF_3346 e1356cef4b16bae01c9218d90a1196cb 241 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 241 43.917 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 BAMF_3346 e1356cef4b16bae01c9218d90a1196cb 241 Gene3D G3DSA:3.40.50.1360 1 239 8.9E-105 T 12-10-2018 BAMF_3346 e1356cef4b16bae01c9218d90a1196cb 241 SUPERFAMILY SSF100950 1 238 8.37E-92 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BAMF_3346 e1356cef4b16bae01c9218d90a1196cb 241 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 238 1.3E-101 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 BAMF_0487 8958faf469cc6b21da995d5d74e487c3 463 Gene3D G3DSA:3.40.640.10 93 456 9.1E-120 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_0487 8958faf469cc6b21da995d5d74e487c3 463 SMART SM00345 19 78 2.1E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0487 8958faf469cc6b21da995d5d74e487c3 463 SUPERFAMILY SSF46785 9 78 8.89E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0487 8958faf469cc6b21da995d5d74e487c3 463 Gene3D G3DSA:1.10.10.10 1 85 1.6E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0487 8958faf469cc6b21da995d5d74e487c3 463 SUPERFAMILY SSF53383 95 461 2.01E-76 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_0487 8958faf469cc6b21da995d5d74e487c3 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 5.6E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0487 8958faf469cc6b21da995d5d74e487c3 463 Pfam PF00155 Aminotransferase class I and II 142 456 1.3E-11 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_0487 8958faf469cc6b21da995d5d74e487c3 463 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 4.3E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0487 8958faf469cc6b21da995d5d74e487c3 463 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 4.3E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_2379 9a6cf321f0ae8fbee5d43d06d43a25ed 126 Gene3D G3DSA:3.40.30.10 4 121 6.4E-38 T 12-10-2018 BAMF_2379 9a6cf321f0ae8fbee5d43d06d43a25ed 126 Pfam PF03960 ArsC family 7 112 2.3E-20 T 12-10-2018 IPR006660 Arsenate reductase-like BAMF_2379 9a6cf321f0ae8fbee5d43d06d43a25ed 126 SUPERFAMILY SSF52833 4 115 1.12E-33 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_2379 9a6cf321f0ae8fbee5d43d06d43a25ed 126 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 115 1.3E-40 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 SUPERFAMILY SSF48557 3 427 3.61E-142 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 427 1.2E-24 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 1.7E-10 T 12-10-2018 BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 1.7E-10 T 12-10-2018 BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 1.7E-10 T 12-10-2018 BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 1.7E-10 T 12-10-2018 BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 Gene3D G3DSA:1.10.40.30 349 430 1.7E-33 T 12-10-2018 BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 SMART SM00998 349 429 6.9E-40 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 3.9E-27 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 3.9E-27 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 3.9E-27 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 3.9E-27 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 Gene3D G3DSA:1.10.275.10 1 92 1.8E-39 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 5.1E-185 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 Pfam PF00206 Lyase 7 286 6.0E-84 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal BAMF_0638 2e7eaffd205711e172cc81ed3e807705 430 Gene3D G3DSA:1.20.200.10 93 348 7.5E-103 T 12-10-2018 BAMF_1764 51844bf672ae14167b93a46c2143de4a 193 PIRSF PIRSF000847 1 193 2.5E-53 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 BAMF_1764 51844bf672ae14167b93a46c2143de4a 193 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 82 2.6E-18 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BAMF_1764 51844bf672ae14167b93a46c2143de4a 193 Gene3D G3DSA:1.20.120.1760 4 183 8.5E-10 T 12-10-2018 BAMF_1764 51844bf672ae14167b93a46c2143de4a 193 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 191 2.0E-68 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 BAMF_1764 51844bf672ae14167b93a46c2143de4a 193 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 60 82 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BAMF_1046 d3f25295ad64d2fe5c8d893dc874952e 163 SUPERFAMILY SSF88659 93 156 7.1E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_1046 d3f25295ad64d2fe5c8d893dc874952e 163 Gene3D G3DSA:1.10.10.10 97 158 7.9E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1046 d3f25295ad64d2fe5c8d893dc874952e 163 Pfam PF04542 Sigma-70 region 2 6 72 4.7E-19 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_1046 d3f25295ad64d2fe5c8d893dc874952e 163 TIGRFAM TIGR02950 SigM_subfam: RNA polymerase sigma factor, SigM family 2 156 2.3E-70 T 12-10-2018 IPR014296 RNA polymerase sigma-M, bacillaceae GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_1046 d3f25295ad64d2fe5c8d893dc874952e 163 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 28 58 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_1046 d3f25295ad64d2fe5c8d893dc874952e 163 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 153 9.0E-30 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_1046 d3f25295ad64d2fe5c8d893dc874952e 163 Gene3D G3DSA:1.10.1740.10 2 74 6.3E-22 T 12-10-2018 BAMF_1046 d3f25295ad64d2fe5c8d893dc874952e 163 SUPERFAMILY SSF88946 4 81 4.19E-22 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_1046 d3f25295ad64d2fe5c8d893dc874952e 163 Pfam PF08281 Sigma-70, region 4 105 152 4.6E-12 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_0718 39efce1f1b858702ca06d5ccf1940000 478 PIRSF PIRSF002457 1 478 1.2E-171 T 12-10-2018 IPR030676 Citrate carrier CitT-related BAMF_0718 39efce1f1b858702ca06d5ccf1940000 478 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 32 472 2.6E-135 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BAMF_0718 39efce1f1b858702ca06d5ccf1940000 478 Pfam PF00939 Sodium:sulfate symporter transmembrane region 14 478 8.2E-182 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BAMF_1762 e82bae90b7d0e9cbfd93733bb4c224bd 263 PIRSF PIRSF021288 1 262 3.5E-145 T 12-10-2018 IPR016784 Uncharacterised protein UCP021288 with ACT domain BAMF_1762 e82bae90b7d0e9cbfd93733bb4c224bd 263 Pfam PF11868 Protein of unknown function (DUF3388) 72 261 1.2E-104 T 12-10-2018 IPR024514 Domain of unknown function DUF3388 BAMF_1762 e82bae90b7d0e9cbfd93733bb4c224bd 263 SUPERFAMILY SSF55021 6 71 4.58E-7 T 12-10-2018 BAMF_0500 1fbd34f1d09c573a38728a1024200d03 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 245 1.3E-60 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_0500 1fbd34f1d09c573a38728a1024200d03 411 PIRSF PIRSF000447 1 411 2.8E-166 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BAMF_0500 1fbd34f1d09c573a38728a1024200d03 411 SUPERFAMILY SSF53901 1 250 1.28E-75 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_0500 1fbd34f1d09c573a38728a1024200d03 411 Gene3D G3DSA:3.40.47.10 255 399 7.0E-49 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_0500 1fbd34f1d09c573a38728a1024200d03 411 Gene3D G3DSA:3.40.47.10 1 253 8.7E-89 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_0500 1fbd34f1d09c573a38728a1024200d03 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 367 2.0E-34 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_0500 1fbd34f1d09c573a38728a1024200d03 411 SUPERFAMILY SSF53901 213 410 7.84E-68 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_0500 1fbd34f1d09c573a38728a1024200d03 411 SMART SM00825 Beta-ketoacyl synthase 4 411 3.6E-17 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_0500 1fbd34f1d09c573a38728a1024200d03 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 408 9.0E-172 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BAMF_0967 67422b055c781eba50259e09391383be 476 Pfam PF03553 Na+/H+ antiporter family 107 473 1.6E-35 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:3.40.50.12780 1495 1896 9.7E-128 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SUPERFAMILY SSF52777 1226 1467 3.22E-62 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SUPERFAMILY SSF52777 2093 2281 8.89E-46 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:3.30.559.10 2098 2457 1.1E-148 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:3.30.559.10 1058 1413 1.1E-148 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SUPERFAMILY SSF56801 1462 2023 1.31E-148 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 ProSitePatterns PS00455 Putative AMP-binding domain signature. 611 622 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Pfam PF00668 Condensation domain 7 450 2.0E-135 T 12-10-2018 IPR001242 Condensation domain BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Pfam PF00668 Condensation domain 3120 3569 2.8E-123 T 12-10-2018 IPR001242 Condensation domain BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Pfam PF00668 Condensation domain 2094 2528 6.8E-141 T 12-10-2018 IPR001242 Condensation domain BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Pfam PF00668 Condensation domain 1054 1484 8.3E-140 T 12-10-2018 IPR001242 Condensation domain BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3066 3081 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:3.30.559.10 12 382 1.3E-132 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 3428 3576 1.1E-50 T 12-10-2018 IPR010060 Non-ribosomal peptide synthase BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SUPERFAMILY SSF52777 1060 1222 3.78E-44 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:1.10.1200.10 2000 2083 1.5E-23 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SUPERFAMILY SSF52777 3116 3295 8.89E-37 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SMART SM00823 Phosphopantetheine attachment site 971 1039 0.0023 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SMART SM00823 Phosphopantetheine attachment site 3042 3110 0.0013 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SMART SM00823 Phosphopantetheine attachment site 2011 2080 0.0041 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:3.30.300.30 2931 3027 1.9E-32 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:3.30.300.30 859 960 2.1E-32 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SUPERFAMILY SSF52777 3306 3557 2.11E-39 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:3.30.559.30 1224 1468 1.1E-148 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:3.30.559.30 3291 3559 1.3E-73 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Pfam PF00501 AMP-binding enzyme 1503 1904 5.7E-104 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Pfam PF00501 AMP-binding enzyme 471 864 2.2E-100 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Pfam PF00501 AMP-binding enzyme 2548 2936 5.9E-95 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:1.10.1200.10 3028 3111 2.7E-25 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2035 2050 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SUPERFAMILY SSF52777 190 434 4.67E-49 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:3.40.50.12780 456 858 2.6E-134 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:3.40.50.12780 2534 2930 1.0E-123 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:3.30.559.30 191 446 1.3E-132 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1642 1653 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2693 2704 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:1.10.1200.10 961 1044 8.8E-23 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SUPERFAMILY SSF56801 431 984 6.02E-152 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 492 887 3.5E-132 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1523 1928 1.4E-132 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2570 2960 2.8E-120 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SUPERFAMILY SSF52777 2269 2511 4.56E-58 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 ProSitePatterns PS00012 Phosphopantetheine attachment site. 994 1009 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Pfam PF00550 Phosphopantetheine attachment site 972 1035 6.1E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Pfam PF00550 Phosphopantetheine attachment site 3045 3106 2.3E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Pfam PF00550 Phosphopantetheine attachment site 2012 2075 4.8E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SUPERFAMILY SSF47336 2005 2110 1.57E-17 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SUPERFAMILY SSF56801 2507 3055 8.9E-149 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Pfam PF13193 AMP-binding enzyme C-terminal domain 2944 3016 3.7E-11 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Pfam PF13193 AMP-binding enzyme C-terminal domain 1912 1984 3.5E-7 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Pfam PF13193 AMP-binding enzyme C-terminal domain 872 945 9.7E-7 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SUPERFAMILY SSF47336 963 1070 7.33E-18 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:3.30.300.30 1899 1999 8.6E-30 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:3.30.559.10 3112 3290 7.5E-59 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SUPERFAMILY SSF47336 3035 3107 5.37E-20 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 SUPERFAMILY SSF52777 12 189 1.48E-42 T 12-10-2018 BAMF_0313 edabd0a5c2a4e59cd77ec59400d224ba 3586 Gene3D G3DSA:3.30.559.30 2267 2513 1.1E-148 T 12-10-2018 BAMF_2714 bbda5a2b44a3d97836d8ca59945154ea 239 Gene3D G3DSA:1.10.10.10 136 238 2.1E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2714 bbda5a2b44a3d97836d8ca59945154ea 239 Pfam PF00072 Response regulator receiver domain 5 114 1.7E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2714 bbda5a2b44a3d97836d8ca59945154ea 239 SUPERFAMILY SSF46894 133 233 2.38E-30 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_2714 bbda5a2b44a3d97836d8ca59945154ea 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 3.9E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_2714 bbda5a2b44a3d97836d8ca59945154ea 239 SMART SM00862 156 232 1.0E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_2714 bbda5a2b44a3d97836d8ca59945154ea 239 Gene3D G3DSA:3.40.50.2300 1 135 1.0E-40 T 12-10-2018 BAMF_2714 bbda5a2b44a3d97836d8ca59945154ea 239 SMART SM00448 3 114 1.5E-49 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2714 bbda5a2b44a3d97836d8ca59945154ea 239 SUPERFAMILY SSF52172 2 122 8.11E-44 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_2781 7775c630e22b98890b147dd7024e3367 201 Gene3D G3DSA:2.40.50.140 5 199 3.8E-76 T 12-10-2018 BAMF_2781 7775c630e22b98890b147dd7024e3367 201 Pfam PF14794 Domain of unknown function (DUF4479) 23 91 4.1E-27 T 12-10-2018 IPR027855 Domain of unknown function DUF4479 BAMF_2781 7775c630e22b98890b147dd7024e3367 201 Gene3D G3DSA:3.30.1940.10 18 92 3.8E-76 T 12-10-2018 IPR037154 YtpR-like superfamily BAMF_2781 7775c630e22b98890b147dd7024e3367 201 SUPERFAMILY SSF50249 92 199 5.14E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_2781 7775c630e22b98890b147dd7024e3367 201 Pfam PF01588 Putative tRNA binding domain 96 197 1.3E-26 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BAMF_2237 d36d270d9cf7b08451cd1f4dcafd6f35 338 PIRSF PIRSF011570 1 335 6.9E-167 T 12-10-2018 IPR010894 Stage V sporulation AD BAMF_2237 d36d270d9cf7b08451cd1f4dcafd6f35 338 SUPERFAMILY SSF53901 57 313 1.92E-16 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_2237 d36d270d9cf7b08451cd1f4dcafd6f35 338 Gene3D G3DSA:3.40.47.40 1 338 2.9E-160 T 12-10-2018 IPR038369 Stage V sporulation AD superfamily BAMF_2237 d36d270d9cf7b08451cd1f4dcafd6f35 338 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 5 332 1.1E-152 T 12-10-2018 IPR010894 Stage V sporulation AD BAMF_2237 d36d270d9cf7b08451cd1f4dcafd6f35 338 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 6 332 2.0E-167 T 12-10-2018 IPR010894 Stage V sporulation AD BAMF_2740 3a06c0d2247713b64aacdb7f2987c5e3 328 Pfam PF02384 N-6 DNA Methylase 97 307 4.5E-16 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 BAMF_2740 3a06c0d2247713b64aacdb7f2987c5e3 328 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 121 135 8.2E-8 T 12-10-2018 BAMF_2740 3a06c0d2247713b64aacdb7f2987c5e3 328 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 217 241 8.2E-8 T 12-10-2018 BAMF_2740 3a06c0d2247713b64aacdb7f2987c5e3 328 PIRSF PIRSF026567 1 328 8.9E-139 T 12-10-2018 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted BAMF_2740 3a06c0d2247713b64aacdb7f2987c5e3 328 Gene3D G3DSA:3.40.50.150 88 328 6.3E-60 T 12-10-2018 BAMF_2740 3a06c0d2247713b64aacdb7f2987c5e3 328 SUPERFAMILY SSF53335 27 310 3.82E-51 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_2740 3a06c0d2247713b64aacdb7f2987c5e3 328 Gene3D G3DSA:1.10.150.470 1 85 1.9E-18 T 12-10-2018 BAMF_1916 e8ec8c7641a6a542a0d2fed178f05ac0 261 Gene3D G3DSA:3.40.50.720 2 261 1.3E-82 T 12-10-2018 BAMF_1916 e8ec8c7641a6a542a0d2fed178f05ac0 261 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 8 261 7.2E-109 T 12-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 BAMF_1916 e8ec8c7641a6a542a0d2fed178f05ac0 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 259 6.9E-66 T 12-10-2018 BAMF_1916 e8ec8c7641a6a542a0d2fed178f05ac0 261 SUPERFAMILY SSF51735 6 260 3.08E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1916 e8ec8c7641a6a542a0d2fed178f05ac0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.2E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1916 e8ec8c7641a6a542a0d2fed178f05ac0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 3.2E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1916 e8ec8c7641a6a542a0d2fed178f05ac0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.2E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1916 e8ec8c7641a6a542a0d2fed178f05ac0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.2E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1916 e8ec8c7641a6a542a0d2fed178f05ac0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.2E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1916 e8ec8c7641a6a542a0d2fed178f05ac0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.2E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1916 e8ec8c7641a6a542a0d2fed178f05ac0 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1916 e8ec8c7641a6a542a0d2fed178f05ac0 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1916 e8ec8c7641a6a542a0d2fed178f05ac0 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.0E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1916 e8ec8c7641a6a542a0d2fed178f05ac0 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_1695 51413e25bf2526041d1819e973e676ee 438 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 20 433 2.0E-206 T 12-10-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_1695 51413e25bf2526041d1819e973e676ee 438 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 434 5.5E-206 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_1695 51413e25bf2526041d1819e973e676ee 438 SMART SM00382 157 338 5.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1695 51413e25bf2526041d1819e973e676ee 438 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 345 354 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_1695 51413e25bf2526041d1819e973e676ee 438 SUPERFAMILY SSF52540 92 359 9.83E-97 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1695 51413e25bf2526041d1819e973e676ee 438 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 22 88 2.2E-5 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_1695 51413e25bf2526041d1819e973e676ee 438 Gene3D G3DSA:3.40.50.12240 11 436 2.0E-153 T 12-10-2018 BAMF_1695 51413e25bf2526041d1819e973e676ee 438 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 145 354 9.2E-77 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_2255 475294a03b8d930f8d7c26466da7c064 329 Pfam PF00710 Asparaginase, N-terminal 3 186 3.7E-65 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 BAMF_2255 475294a03b8d930f8d7c26466da7c064 329 PIRSF PIRSF500176 1 325 1.1E-109 T 12-10-2018 BAMF_2255 475294a03b8d930f8d7c26466da7c064 329 SUPERFAMILY SSF53774 1 327 1.24E-100 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 BAMF_2255 475294a03b8d930f8d7c26466da7c064 329 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 BAMF_2255 475294a03b8d930f8d7c26466da7c064 329 PIRSF PIRSF001220 1 327 6.1E-101 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BAMF_2255 475294a03b8d930f8d7c26466da7c064 329 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 7.3E-16 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BAMF_2255 475294a03b8d930f8d7c26466da7c064 329 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 7.3E-16 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BAMF_2255 475294a03b8d930f8d7c26466da7c064 329 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 7.3E-16 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BAMF_2255 475294a03b8d930f8d7c26466da7c064 329 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 78 88 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 BAMF_2255 475294a03b8d930f8d7c26466da7c064 329 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 1 328 1.1E-141 T 12-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 BAMF_2255 475294a03b8d930f8d7c26466da7c064 329 Gene3D G3DSA:3.40.50.40 200 328 1.1E-35 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 BAMF_2255 475294a03b8d930f8d7c26466da7c064 329 SMART SM00870 3 316 1.3E-120 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BAMF_2255 475294a03b8d930f8d7c26466da7c064 329 Gene3D G3DSA:3.40.50.1170 1 198 5.2E-69 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 BAMF_2466 e5bb6c6d85f0f338a4b60ec4fc669cdb 182 SUPERFAMILY SSF56784 26 161 4.46E-25 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_2466 e5bb6c6d85f0f338a4b60ec4fc669cdb 182 Gene3D G3DSA:3.40.50.1000 28 163 1.7E-22 T 12-10-2018 IPR023214 HAD superfamily BAMF_2466 e5bb6c6d85f0f338a4b60ec4fc669cdb 182 Pfam PF08282 haloacid dehalogenase-like hydrolase 41 96 1.2E-5 T 12-10-2018 BAMF_2466 e5bb6c6d85f0f338a4b60ec4fc669cdb 182 Pfam PF13242 HAD-hyrolase-like 102 147 1.8E-10 T 12-10-2018 BAMF_2466 e5bb6c6d85f0f338a4b60ec4fc669cdb 182 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 39 149 3.1E-24 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 BAMF_2466 e5bb6c6d85f0f338a4b60ec4fc669cdb 182 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 71 139 2.3E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_2466 e5bb6c6d85f0f338a4b60ec4fc669cdb 182 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 14 179 3.3E-66 T 12-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like BAMF_1110 8c1078f61e82dd23c02096531ae55b88 325 Gene3D G3DSA:3.40.47.10 1 325 1.7E-116 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1110 8c1078f61e82dd23c02096531ae55b88 325 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 183 3.1E-26 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BAMF_1110 8c1078f61e82dd23c02096531ae55b88 325 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 323 1.9E-102 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BAMF_1110 8c1078f61e82dd23c02096531ae55b88 325 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 323 61.833 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BAMF_1110 8c1078f61e82dd23c02096531ae55b88 325 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 234 323 2.0E-32 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BAMF_1110 8c1078f61e82dd23c02096531ae55b88 325 SUPERFAMILY SSF53901 2 323 1.08E-63 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1816 00719923876e954f70e83cf11aa9b87c 381 Pfam PF14657 Arm DNA-binding domain 10 53 1.6E-7 T 12-10-2018 IPR028259 AP2-like integrase, N-terminal domain BAMF_1816 00719923876e954f70e83cf11aa9b87c 381 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 63 119 2.5E-15 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BAMF_1816 00719923876e954f70e83cf11aa9b87c 381 SUPERFAMILY SSF56349 63 363 5.0E-63 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BAMF_1816 00719923876e954f70e83cf11aa9b87c 381 Pfam PF00589 Phage integrase family 173 361 3.3E-30 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BAMF_1816 00719923876e954f70e83cf11aa9b87c 381 Gene3D G3DSA:1.10.443.10 168 374 5.9E-49 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BAMF_1816 00719923876e954f70e83cf11aa9b87c 381 Gene3D G3DSA:1.10.150.130 59 167 5.0E-26 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal BAMF_1704 34c09a98bf77eb219a480a08c6f0adb1 377 SUPERFAMILY SSF101801 294 375 1.96E-24 T 12-10-2018 IPR036429 SpoA-like superfamily BAMF_1704 34c09a98bf77eb219a480a08c6f0adb1 377 Pfam PF04509 CheC-like family 36 71 5.5E-15 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 BAMF_1704 34c09a98bf77eb219a480a08c6f0adb1 377 Pfam PF04509 CheC-like family 132 168 4.9E-16 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 BAMF_1704 34c09a98bf77eb219a480a08c6f0adb1 377 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 297 367 6.2E-25 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) BAMF_1704 34c09a98bf77eb219a480a08c6f0adb1 377 PRINTS PR00956 Flagellar motor switch protein FliN signature 343 358 1.6E-29 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BAMF_1704 34c09a98bf77eb219a480a08c6f0adb1 377 PRINTS PR00956 Flagellar motor switch protein FliN signature 330 343 1.6E-29 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BAMF_1704 34c09a98bf77eb219a480a08c6f0adb1 377 PRINTS PR00956 Flagellar motor switch protein FliN signature 297 313 1.6E-29 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BAMF_1704 34c09a98bf77eb219a480a08c6f0adb1 377 PRINTS PR00956 Flagellar motor switch protein FliN signature 314 330 1.6E-29 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BAMF_1704 34c09a98bf77eb219a480a08c6f0adb1 377 SUPERFAMILY SSF103039 31 220 3.75E-51 T 12-10-2018 IPR028976 CheC-like superfamily BAMF_1704 34c09a98bf77eb219a480a08c6f0adb1 377 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 294 369 4.6E-31 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 BAMF_1704 34c09a98bf77eb219a480a08c6f0adb1 377 Gene3D G3DSA:2.30.330.10 284 377 6.9E-35 T 12-10-2018 IPR036429 SpoA-like superfamily BAMF_1704 34c09a98bf77eb219a480a08c6f0adb1 377 Gene3D G3DSA:3.40.1550.10 30 226 2.1E-55 T 12-10-2018 IPR028976 CheC-like superfamily BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 Gene3D G3DSA:3.40.50.140 1 134 1.8E-54 T 12-10-2018 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 642 56.886 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 SMART SM00437 242 510 6.7E-141 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 Gene3D G3DSA:1.10.460.10 135 550 1.7E-170 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 Pfam PF01751 Toprim domain 5 113 1.2E-29 T 12-10-2018 IPR006171 TOPRIM domain BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 SUPERFAMILY SSF56712 4 561 1.7E-203 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 Pfam PF01131 DNA topoisomerase 128 547 2.5E-139 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 SMART SM00493 3 103 5.3E-34 T 12-10-2018 IPR006171 TOPRIM domain BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 SMART SM00436 104 192 6.2E-54 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 2.2E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 473 487 2.2E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 2.2E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 293 302 2.2E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 2.2E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 611 2.9E-277 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 SUPERFAMILY SSF57783 569 613 9.52E-14 T 12-10-2018 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 302 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 Gene3D G3DSA:3.30.65.10 559 617 4.2E-14 T 12-10-2018 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 Gene3D G3DSA:2.70.20.10 184 457 1.7E-170 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 577 613 3.9E-16 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 616 655 2.3E-14 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 658 689 0.083 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BAMF_1683 2f1d7ab21e6a39ccdda84e286be87ef9 691 Gene3D G3DSA:1.10.290.10 250 385 1.7E-170 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BAMF_0136 454705ba55be44d229606009a78e957c 431 Gene3D G3DSA:1.10.3370.10 1 425 1.4E-155 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BAMF_0136 454705ba55be44d229606009a78e957c 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 146 171 3.8E-101 T 12-10-2018 BAMF_0136 454705ba55be44d229606009a78e957c 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 364 382 3.8E-101 T 12-10-2018 BAMF_0136 454705ba55be44d229606009a78e957c 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 67 87 3.8E-101 T 12-10-2018 BAMF_0136 454705ba55be44d229606009a78e957c 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 309 331 3.8E-101 T 12-10-2018 BAMF_0136 454705ba55be44d229606009a78e957c 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 3.8E-101 T 12-10-2018 BAMF_0136 454705ba55be44d229606009a78e957c 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 269 288 3.8E-101 T 12-10-2018 BAMF_0136 454705ba55be44d229606009a78e957c 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 3.8E-101 T 12-10-2018 BAMF_0136 454705ba55be44d229606009a78e957c 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 172 195 3.8E-101 T 12-10-2018 BAMF_0136 454705ba55be44d229606009a78e957c 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 398 416 3.8E-101 T 12-10-2018 BAMF_0136 454705ba55be44d229606009a78e957c 431 SUPERFAMILY SSF103491 2 420 2.62E-126 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BAMF_0136 454705ba55be44d229606009a78e957c 431 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 429 29.056 T 12-10-2018 IPR026593 Protein translocase subunit SecY BAMF_0136 454705ba55be44d229606009a78e957c 431 PIRSF PIRSF004557 1 431 1.5E-123 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BAMF_0136 454705ba55be44d229606009a78e957c 431 ProSitePatterns PS00755 Protein secY signature 1. 68 87 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BAMF_0136 454705ba55be44d229606009a78e957c 431 Pfam PF00344 SecY translocase 68 413 2.1E-111 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BAMF_0136 454705ba55be44d229606009a78e957c 431 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 425 2.6E-152 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BAMF_0136 454705ba55be44d229606009a78e957c 431 ProSitePatterns PS00756 Protein secY signature 2. 165 182 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BAMF_0135 1ecd9bd62ef41e55fbc5f6e19320e7d8 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0135 1ecd9bd62ef41e55fbc5f6e19320e7d8 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.4E-56 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0135 1ecd9bd62ef41e55fbc5f6e19320e7d8 146 SUPERFAMILY SSF52080 4 143 4.84E-50 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily BAMF_0135 1ecd9bd62ef41e55fbc5f6e19320e7d8 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 1.3E-38 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P BAMF_0135 1ecd9bd62ef41e55fbc5f6e19320e7d8 146 Gene3D G3DSA:3.100.10.10 66 146 7.6E-28 T 12-10-2018 BAMF_0135 1ecd9bd62ef41e55fbc5f6e19320e7d8 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 22.892 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 BAMF_1598 e40955b2109facf042ee9a677fe8db05 262 Pfam PF08478 POTRA domain, FtsQ-type 54 123 2.0E-18 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type BAMF_1598 e40955b2109facf042ee9a677fe8db05 262 Hamap MF_00912 Cell division protein DivIB [divIB]. 13 259 30.383 T 12-10-2018 IPR026580 Cell division protein DivIB BAMF_1598 e40955b2109facf042ee9a677fe8db05 262 Gene3D G3DSA:3.40.50.10960 122 236 2.3E-39 T 12-10-2018 BAMF_1598 e40955b2109facf042ee9a677fe8db05 262 Gene3D G3DSA:3.10.20.310 50 121 4.7E-7 T 12-10-2018 BAMF_1598 e40955b2109facf042ee9a677fe8db05 262 Pfam PF03799 Cell division protein FtsQ 127 235 5.9E-9 T 12-10-2018 IPR005548 Cell division protein FtsQ/DivIB BAMF_0525 c27eeb9210d86f782eaad744b43bc7ce 333 Gene3D G3DSA:3.90.180.10 20 329 1.2E-119 T 12-10-2018 BAMF_0525 c27eeb9210d86f782eaad744b43bc7ce 333 SMART SM00829 13 328 3.4E-7 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BAMF_0525 c27eeb9210d86f782eaad744b43bc7ce 333 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 6 330 8.1E-142 T 12-10-2018 IPR014188 Acrylyl-CoA reductase AcuI BAMF_0525 c27eeb9210d86f782eaad744b43bc7ce 333 SUPERFAMILY SSF51735 119 294 1.39E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0525 c27eeb9210d86f782eaad744b43bc7ce 333 SUPERFAMILY SSF50129 5 145 7.76E-43 T 12-10-2018 IPR011032 GroES-like superfamily BAMF_0525 c27eeb9210d86f782eaad744b43bc7ce 333 Gene3D G3DSA:3.40.50.720 129 297 1.2E-119 T 12-10-2018 BAMF_0525 c27eeb9210d86f782eaad744b43bc7ce 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 90 2.7E-5 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BAMF_0525 c27eeb9210d86f782eaad744b43bc7ce 333 Pfam PF00107 Zinc-binding dehydrogenase 162 272 2.4E-14 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BAMF_3554 44feaf32bd646de3738f27e007728136 702 SUPERFAMILY SSF103501 6 238 7.72E-18 T 12-10-2018 IPR036197 NarG-like superfamily BAMF_3554 44feaf32bd646de3738f27e007728136 702 SUPERFAMILY SSF46548 252 399 4.19E-19 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BAMF_3554 44feaf32bd646de3738f27e007728136 702 Pfam PF13183 4Fe-4S dicluster domain 274 383 1.1E-11 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BAMF_3554 44feaf32bd646de3738f27e007728136 702 Pfam PF02754 Cysteine-rich domain 458 541 1.9E-5 T 12-10-2018 IPR004017 Cysteine-rich domain BAMF_3554 44feaf32bd646de3738f27e007728136 702 Pfam PF02754 Cysteine-rich domain 580 667 1.0E-16 T 12-10-2018 IPR004017 Cysteine-rich domain BAMF_3554 44feaf32bd646de3738f27e007728136 702 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 371 382 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BAMF_0216 c0db6f0cda2f65d3486dced6301806fc 322 Pfam PF00581 Rhodanese-like domain 117 210 5.6E-12 T 12-10-2018 IPR001763 Rhodanese-like domain BAMF_0216 c0db6f0cda2f65d3486dced6301806fc 322 SMART SM00450 115 216 7.6E-21 T 12-10-2018 IPR001763 Rhodanese-like domain BAMF_0216 c0db6f0cda2f65d3486dced6301806fc 322 Gene3D G3DSA:3.30.70.100 1 97 1.2E-30 T 12-10-2018 BAMF_0216 c0db6f0cda2f65d3486dced6301806fc 322 SUPERFAMILY SSF52821 90 247 2.23E-34 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BAMF_0216 c0db6f0cda2f65d3486dced6301806fc 322 Gene3D G3DSA:3.40.250.10 102 250 5.4E-45 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BAMF_0216 c0db6f0cda2f65d3486dced6301806fc 322 Pfam PF12368 Rhodanase C-terminal 222 288 8.5E-14 T 12-10-2018 IPR022111 Rhodanase, C-terminal BAMF_0216 c0db6f0cda2f65d3486dced6301806fc 322 Hamap MF_00469 UPF0176 protein YceA [yceA]. 3 267 40.365 T 12-10-2018 IPR020936 Uncharacterised protein family UPF0176 BAMF_0785 8d4684952e0a1a79e07d2fe7bff7fe88 602 SUPERFAMILY SSF52540 293 521 2.57E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0785 8d4684952e0a1a79e07d2fe7bff7fe88 602 Gene3D G3DSA:1.10.10.60 537 599 5.9E-12 T 12-10-2018 BAMF_0785 8d4684952e0a1a79e07d2fe7bff7fe88 602 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 378 393 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BAMF_0785 8d4684952e0a1a79e07d2fe7bff7fe88 602 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 500 509 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BAMF_0785 8d4684952e0a1a79e07d2fe7bff7fe88 602 Pfam PF02954 Bacterial regulatory protein, Fis family 556 595 4.1E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BAMF_0785 8d4684952e0a1a79e07d2fe7bff7fe88 602 Pfam PF01590 GAF domain 89 190 4.9E-6 T 12-10-2018 IPR003018 GAF domain GO:0005515 BAMF_0785 8d4684952e0a1a79e07d2fe7bff7fe88 602 Gene3D G3DSA:3.40.50.300 279 462 1.9E-62 T 12-10-2018 BAMF_0785 8d4684952e0a1a79e07d2fe7bff7fe88 602 Pfam PF00158 Sigma-54 interaction domain 293 459 6.5E-66 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BAMF_0785 8d4684952e0a1a79e07d2fe7bff7fe88 602 Gene3D G3DSA:1.10.8.60 463 523 9.6E-11 T 12-10-2018 BAMF_0785 8d4684952e0a1a79e07d2fe7bff7fe88 602 SUPERFAMILY SSF46689 500 597 2.56E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_0785 8d4684952e0a1a79e07d2fe7bff7fe88 602 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 561 578 2.8E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BAMF_0785 8d4684952e0a1a79e07d2fe7bff7fe88 602 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 578 598 2.8E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BAMF_0785 8d4684952e0a1a79e07d2fe7bff7fe88 602 SMART SM00382 311 455 2.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0785 8d4684952e0a1a79e07d2fe7bff7fe88 602 Gene3D G3DSA:3.30.450.40 18 204 5.9E-56 T 12-10-2018 IPR029016 GAF-like domain superfamily BAMF_2638 da50dd948cfafb49926d64bac4760f3e 597 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 41 595 2.8E-279 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BAMF_2638 da50dd948cfafb49926d64bac4760f3e 597 Gene3D G3DSA:3.40.50.1220 224 389 9.9E-61 T 12-10-2018 BAMF_2638 da50dd948cfafb49926d64bac4760f3e 597 SUPERFAMILY SSF52518 38 215 2.86E-61 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_2638 da50dd948cfafb49926d64bac4760f3e 597 SUPERFAMILY SSF52467 223 391 1.02E-61 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BAMF_2638 da50dd948cfafb49926d64bac4760f3e 597 Gene3D G3DSA:3.40.50.970 34 213 1.0E-70 T 12-10-2018 BAMF_2638 da50dd948cfafb49926d64bac4760f3e 597 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 41 205 1.8E-55 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BAMF_2638 da50dd948cfafb49926d64bac4760f3e 597 Gene3D G3DSA:3.40.50.970 392 596 1.2E-70 T 12-10-2018 BAMF_2638 da50dd948cfafb49926d64bac4760f3e 597 SUPERFAMILY SSF52518 400 595 1.34E-67 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_2638 da50dd948cfafb49926d64bac4760f3e 597 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 230 365 2.2E-44 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BAMF_2638 da50dd948cfafb49926d64bac4760f3e 597 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 423 571 6.6E-53 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BAMF_2635 194f23e567ac5d245b557cf8070eb332 531 Pfam PF08502 LeuA allosteric (dimerisation) domain 381 513 4.4E-36 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BAMF_2635 194f23e567ac5d245b557cf8070eb332 531 Gene3D G3DSA:3.30.160.270 405 514 1.2E-10 T 12-10-2018 BAMF_2635 194f23e567ac5d245b557cf8070eb332 531 SUPERFAMILY SSF110921 408 512 3.79E-20 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BAMF_2635 194f23e567ac5d245b557cf8070eb332 531 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 24 40 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BAMF_2635 194f23e567ac5d245b557cf8070eb332 531 Gene3D G3DSA:1.10.238.260 292 404 1.8E-38 T 12-10-2018 BAMF_2635 194f23e567ac5d245b557cf8070eb332 531 SMART SM00917 381 514 3.8E-34 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BAMF_2635 194f23e567ac5d245b557cf8070eb332 531 Gene3D G3DSA:3.20.20.70 13 288 9.6E-113 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_2635 194f23e567ac5d245b557cf8070eb332 531 Pfam PF00682 HMGL-like 16 285 1.6E-94 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BAMF_2635 194f23e567ac5d245b557cf8070eb332 531 SUPERFAMILY SSF51569 15 303 3.48E-96 T 12-10-2018 BAMF_2635 194f23e567ac5d245b557cf8070eb332 531 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 14 523 42.62 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BAMF_2635 194f23e567ac5d245b557cf8070eb332 531 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 211 224 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BAMF_2635 194f23e567ac5d245b557cf8070eb332 531 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 16 511 2.1E-244 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 Gene3D G3DSA:1.20.890.40 1153 1194 3.7E-67 T 12-10-2018 BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 Gene3D G3DSA:3.30.559.10 13 386 1.2E-136 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 SUPERFAMILY SSF47336 965 1037 4.97E-19 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 SUPERFAMILY SSF53474 1042 1255 2.74E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 Pfam PF00550 Phosphopantetheine attachment site 974 1035 2.1E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 Gene3D G3DSA:3.40.50.1820 1053 1256 3.7E-67 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 Gene3D G3DSA:1.10.1200.10 964 1042 1.3E-21 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 Pfam PF00975 Thioesterase domain 1060 1166 6.9E-22 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 Gene3D G3DSA:3.40.50.12780 460 861 2.2E-129 T 12-10-2018 BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 Pfam PF13193 AMP-binding enzyme C-terminal domain 875 946 2.4E-8 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 496 891 2.1E-123 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 Gene3D G3DSA:3.30.559.30 194 451 1.2E-136 T 12-10-2018 BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 SUPERFAMILY SSF52777 13 192 2.45E-44 T 12-10-2018 BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 SMART SM00824 Thioesterase 1062 1203 0.0036 T 12-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 ProSitePatterns PS00455 Putative AMP-binding domain signature. 614 625 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 Pfam PF00668 Condensation domain 8 454 1.8E-123 T 12-10-2018 IPR001242 Condensation domain BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 PIRSF PIRSF001617 830 915 4.3E-11 T 12-10-2018 BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 PIRSF PIRSF001617 586 833 2.1E-16 T 12-10-2018 BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 PIRSF PIRSF001617 908 1060 4.0E-22 T 12-10-2018 BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 PIRSF PIRSF001617 196 580 2.0E-11 T 12-10-2018 BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 Gene3D G3DSA:3.30.300.30 862 963 2.5E-28 T 12-10-2018 BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 PRINTS PR00154 AMP-binding signature 609 620 1.2E-5 T 12-10-2018 IPR020459 AMP-binding BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 PRINTS PR00154 AMP-binding signature 621 629 1.2E-5 T 12-10-2018 IPR020459 AMP-binding BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 SUPERFAMILY SSF52777 193 443 1.33E-49 T 12-10-2018 BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 SUPERFAMILY SSF56801 435 984 1.06E-143 T 12-10-2018 BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 ProSitePatterns PS00012 Phosphopantetheine attachment site. 996 1011 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1938 9285571f93e0eb17347df23d59c3843d 1268 Pfam PF00501 AMP-binding enzyme 475 867 4.1E-96 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_0046 4a5d2de4af6e50ea076c185f615d8fa0 289 PIRSF PIRSF010376 1 288 1.2E-99 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BAMF_0046 4a5d2de4af6e50ea076c185f615d8fa0 289 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 279 35.735 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BAMF_0046 4a5d2de4af6e50ea076c185f615d8fa0 289 Gene3D G3DSA:3.30.70.890 162 286 5.2E-30 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BAMF_0046 4a5d2de4af6e50ea076c185f615d8fa0 289 SUPERFAMILY SSF54211 2 157 3.64E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_0046 4a5d2de4af6e50ea076c185f615d8fa0 289 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1 287 6.3E-121 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BAMF_0046 4a5d2de4af6e50ea076c185f615d8fa0 289 Gene3D G3DSA:3.30.230.10 1 159 8.4E-61 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BAMF_0046 4a5d2de4af6e50ea076c185f615d8fa0 289 Pfam PF08544 GHMP kinases C terminal 197 270 1.7E-8 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain BAMF_0046 4a5d2de4af6e50ea076c185f615d8fa0 289 Pfam PF00288 GHMP kinases N terminal domain 87 144 1.5E-12 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BAMF_0046 4a5d2de4af6e50ea076c185f615d8fa0 289 SUPERFAMILY SSF55060 161 281 2.12E-32 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BAMF_2624 e19bc4f27c6410691234c8571867fe71 455 SUPERFAMILY SSF69075 318 420 2.62E-14 T 12-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BAMF_2624 e19bc4f27c6410691234c8571867fe71 455 SUPERFAMILY SSF51735 162 315 1.7E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2624 e19bc4f27c6410691234c8571867fe71 455 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.2E-45 T 12-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BAMF_2624 e19bc4f27c6410691234c8571867fe71 455 PIRSF PIRSF000445 1 434 6.1E-157 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BAMF_2624 e19bc4f27c6410691234c8571867fe71 455 Gene3D G3DSA:3.30.460.30 1 158 9.7E-54 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BAMF_2624 e19bc4f27c6410691234c8571867fe71 455 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 417 30.129 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BAMF_2624 e19bc4f27c6410691234c8571867fe71 455 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 12-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BAMF_2624 e19bc4f27c6410691234c8571867fe71 455 SUPERFAMILY SSF69742 1 158 9.81E-46 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BAMF_2624 e19bc4f27c6410691234c8571867fe71 455 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 171 306 2.8E-46 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BAMF_2624 e19bc4f27c6410691234c8571867fe71 455 Gene3D G3DSA:3.40.50.720 161 313 5.2E-47 T 12-10-2018 BAMF_2624 e19bc4f27c6410691234c8571867fe71 455 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 420 1.5E-170 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BAMF_2624 e19bc4f27c6410691234c8571867fe71 455 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 418 3.8E-19 T 12-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BAMF_3479 7e6921312eadd1a637cc058c5f4823e4 131 SUPERFAMILY SSF81330 10 120 1.31E-34 T 12-10-2018 IPR036019 Gated mechanosensitive channel BAMF_3479 7e6921312eadd1a637cc058c5f4823e4 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 93 2.2E-11 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BAMF_3479 7e6921312eadd1a637cc058c5f4823e4 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 2.2E-11 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BAMF_3479 7e6921312eadd1a637cc058c5f4823e4 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 75 83 2.2E-11 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BAMF_3479 7e6921312eadd1a637cc058c5f4823e4 131 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 124 6.0E-46 T 12-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L BAMF_3479 7e6921312eadd1a637cc058c5f4823e4 131 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 125 3.4E-56 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BAMF_3479 7e6921312eadd1a637cc058c5f4823e4 131 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 12-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site BAMF_3479 7e6921312eadd1a637cc058c5f4823e4 131 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 125 24.09 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BAMF_3479 7e6921312eadd1a637cc058c5f4823e4 131 Gene3D G3DSA:1.10.1200.120 1 127 1.9E-42 T 12-10-2018 IPR036019 Gated mechanosensitive channel BAMF_2244 2ce29ca1563b31dede92fb2d75e486a7 272 SUPERFAMILY SSF53167 3 269 6.28E-101 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BAMF_2244 2ce29ca1563b31dede92fb2d75e486a7 272 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 74 115 - T 12-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 BAMF_2244 2ce29ca1563b31dede92fb2d75e486a7 272 PIRSF PIRSF000477 1 270 6.2E-124 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 BAMF_2244 2ce29ca1563b31dede92fb2d75e486a7 272 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 21 267 4.8E-110 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 BAMF_2244 2ce29ca1563b31dede92fb2d75e486a7 272 Gene3D G3DSA:3.40.50.1580 1 270 2.3E-118 T 12-10-2018 BAMF_2244 2ce29ca1563b31dede92fb2d75e486a7 272 Pfam PF01048 Phosphorylase superfamily 21 268 3.9E-58 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BAMF_2244 2ce29ca1563b31dede92fb2d75e486a7 272 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 21 268 5.9E-124 T 12-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 BAMF_3836 4de805281e495ebeffb5d8ee40332c59 56 TIGRFAM TIGR04129 CxxH_BA5709: CxxH/CxxC protein, BA_5709 family 5 53 9.9E-21 T 12-10-2018 IPR025626 YyzF-like protein BAMF_3836 4de805281e495ebeffb5d8ee40332c59 56 Pfam PF14116 YyzF-like protein 7 54 1.0E-18 T 12-10-2018 IPR025626 YyzF-like protein BAMF_3408 3972c7a54c08d6f455570602530f0c8d 292 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 264 5.7E-125 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 BAMF_3408 3972c7a54c08d6f455570602530f0c8d 292 Gene3D G3DSA:3.90.550.10 1 290 4.2E-93 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3408 3972c7a54c08d6f455570602530f0c8d 292 SUPERFAMILY SSF53448 3 268 1.01E-68 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3408 3972c7a54c08d6f455570602530f0c8d 292 Pfam PF00483 Nucleotidyl transferase 6 260 1.3E-33 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BAMF_0794 e824a7b2ee7bf9cf730330274be25435 271 Gene3D G3DSA:3.10.180.10 154 269 1.5E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_0794 e824a7b2ee7bf9cf730330274be25435 271 Gene3D G3DSA:3.10.180.10 1 131 1.2E-27 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_0794 e824a7b2ee7bf9cf730330274be25435 271 SUPERFAMILY SSF54593 156 261 8.11E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_0794 e824a7b2ee7bf9cf730330274be25435 271 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 89 108 - T 12-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 BAMF_0794 e824a7b2ee7bf9cf730330274be25435 271 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 109 4.9E-14 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BAMF_0794 e824a7b2ee7bf9cf730330274be25435 271 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 156 249 6.4E-8 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BAMF_0794 e824a7b2ee7bf9cf730330274be25435 271 SUPERFAMILY SSF54593 1 155 4.56E-36 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_0082 a63477ddc688b08fe17e9cad9d8ec3ce 154 Gene3D G3DSA:1.10.1200.150 74 154 1.2E-28 T 12-10-2018 BAMF_0082 a63477ddc688b08fe17e9cad9d8ec3ce 154 Gene3D G3DSA:1.10.10.1240 3 73 4.5E-36 T 12-10-2018 BAMF_0082 a63477ddc688b08fe17e9cad9d8ec3ce 154 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 4 151 1.3E-57 T 12-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 BAMF_0082 a63477ddc688b08fe17e9cad9d8ec3ce 154 PIRSF PIRSF010607 1 154 5.2E-67 T 12-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 BAMF_0228 4bfde05114a3fed0bf4fa11bf4d6aeca 54 Pfam PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein 1 52 6.2E-22 T 12-10-2018 IPR031538 Tryptophan RNA-binding attenuator protein inhibitory protein BAMF_0228 4bfde05114a3fed0bf4fa11bf4d6aeca 54 SUPERFAMILY SSF57938 8 43 3.66E-6 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily BAMF_0228 4bfde05114a3fed0bf4fa11bf4d6aeca 54 Gene3D G3DSA:2.10.230.20 1 54 5.5E-26 T 12-10-2018 BAMF_2358 3891ccb9a8a7e0fc27b729ca4b32c2b5 491 Gene3D G3DSA:3.40.640.10 86 332 3.2E-58 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_2358 3891ccb9a8a7e0fc27b729ca4b32c2b5 491 Pfam PF02347 Glycine cleavage system P-protein 44 300 3.6E-9 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BAMF_2358 3891ccb9a8a7e0fc27b729ca4b32c2b5 491 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 7 485 60.308 T 12-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 BAMF_2358 3891ccb9a8a7e0fc27b729ca4b32c2b5 491 SUPERFAMILY SSF53383 9 483 2.39E-113 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_2358 3891ccb9a8a7e0fc27b729ca4b32c2b5 491 Gene3D G3DSA:3.90.1150.10 338 470 8.9E-48 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_0261 3dea0932d47dcff79a3ac3c9797c4c07 331 Gene3D G3DSA:3.20.20.30 1 331 8.0E-96 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_0261 3dea0932d47dcff79a3ac3c9797c4c07 331 SUPERFAMILY SSF51679 2 328 4.71E-72 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_0261 3dea0932d47dcff79a3ac3c9797c4c07 331 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 328 2.6E-117 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 BAMF_0261 3dea0932d47dcff79a3ac3c9797c4c07 331 Pfam PF00296 Luciferase-like monooxygenase 16 299 1.2E-32 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BAMF_2357 c960a1f83bb38190bfe154c91d98060f 127 Pfam PF00581 Rhodanese-like domain 41 119 1.5E-20 T 12-10-2018 IPR001763 Rhodanese-like domain BAMF_2357 c960a1f83bb38190bfe154c91d98060f 127 Gene3D G3DSA:3.40.250.10 29 127 5.0E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BAMF_2357 c960a1f83bb38190bfe154c91d98060f 127 SMART SM00450 29 124 1.1E-32 T 12-10-2018 IPR001763 Rhodanese-like domain BAMF_2357 c960a1f83bb38190bfe154c91d98060f 127 SUPERFAMILY SSF52821 8 119 3.01E-35 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BAMF_1209 9cd667309dfec3be39e02e968787bc3e 328 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_1209 9cd667309dfec3be39e02e968787bc3e 328 Gene3D G3DSA:3.40.50.300 1 328 1.8E-101 T 12-10-2018 BAMF_1209 9cd667309dfec3be39e02e968787bc3e 328 SUPERFAMILY SSF52540 4 254 2.08E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1209 9cd667309dfec3be39e02e968787bc3e 328 SMART SM00382 33 234 3.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1209 9cd667309dfec3be39e02e968787bc3e 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 9.0E-29 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BAMF_1209 9cd667309dfec3be39e02e968787bc3e 328 Pfam PF00005 ABC transporter 25 183 1.9E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1209 9cd667309dfec3be39e02e968787bc3e 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 8.6E-21 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BAMF_3543 3dbc7f6706fcae5b1211a83e72384fd3 196 Gene3D G3DSA:3.40.50.300 1 141 3.5E-57 T 12-10-2018 BAMF_3543 3dbc7f6706fcae5b1211a83e72384fd3 196 Gene3D G3DSA:3.30.60.20 142 196 4.7E-27 T 12-10-2018 BAMF_3543 3dbc7f6706fcae5b1211a83e72384fd3 196 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 174 187 - T 12-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BAMF_3543 3dbc7f6706fcae5b1211a83e72384fd3 196 SUPERFAMILY SSF52540 8 142 7.12E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3543 3dbc7f6706fcae5b1211a83e72384fd3 196 PIRSF PIRSF035805 5 196 1.1E-64 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BAMF_3543 3dbc7f6706fcae5b1211a83e72384fd3 196 SUPERFAMILY SSF57716 142 192 2.07E-16 T 12-10-2018 BAMF_3543 3dbc7f6706fcae5b1211a83e72384fd3 196 Pfam PF00265 Thymidine kinase 8 187 1.3E-60 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BAMF_3543 3dbc7f6706fcae5b1211a83e72384fd3 196 Hamap MF_00124 Thymidine kinase [tdk]. 7 190 37.477 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BAMF_3759 487677e617254fe313d4f199f3df9324 554 ProSitePatterns PS01233 Urocanase signature. 438 453 - T 12-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BAMF_3759 487677e617254fe313d4f199f3df9324 554 PIRSF PIRSF001423 1 554 1.3E-297 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BAMF_3759 487677e617254fe313d4f199f3df9324 554 TIGRFAM TIGR01228 hutU: urocanate hydratase 6 550 0.0 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BAMF_3759 487677e617254fe313d4f199f3df9324 554 Gene3D G3DSA:3.40.1770.10 16 538 1.4E-257 T 12-10-2018 BAMF_3759 487677e617254fe313d4f199f3df9324 554 Pfam PF17391 Urocanase N-terminal domain 8 134 7.9E-61 T 12-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BAMF_3759 487677e617254fe313d4f199f3df9324 554 Gene3D G3DSA:3.40.50.10730 138 345 1.4E-257 T 12-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BAMF_3759 487677e617254fe313d4f199f3df9324 554 Hamap MF_00577 Urocanate hydratase [hutU]. 1 552 51.895 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BAMF_3759 487677e617254fe313d4f199f3df9324 554 Pfam PF01175 Urocanase Rossmann-like domain 137 345 1.7E-89 T 12-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BAMF_3759 487677e617254fe313d4f199f3df9324 554 Pfam PF17392 Urocanase C-terminal domain 348 542 8.8E-96 T 12-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BAMF_3759 487677e617254fe313d4f199f3df9324 554 SUPERFAMILY SSF111326 6 551 5.75E-258 T 12-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BAMF_0508 0710f51a599db7774eb836d24ceb6ebd 351 SMART SM01329 5 345 1.2E-163 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BAMF_0508 0710f51a599db7774eb836d24ceb6ebd 351 Gene3D G3DSA:3.40.718.10 1 351 2.4E-124 T 12-10-2018 BAMF_0508 0710f51a599db7774eb836d24ceb6ebd 351 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 345 2.7E-80 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BAMF_0508 0710f51a599db7774eb836d24ceb6ebd 351 SUPERFAMILY SSF53659 1 348 9.98E-113 T 12-10-2018 BAMF_0508 0710f51a599db7774eb836d24ceb6ebd 351 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 349 1.7E-187 T 12-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 BAMF_0508 0710f51a599db7774eb836d24ceb6ebd 351 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 239 258 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 BAMF_3548 27e50026780f4865017006034df83fa0 212 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 6.8E-106 T 12-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BAMF_3548 27e50026780f4865017006034df83fa0 212 Hamap MF_00494 Probable transaldolase [tal]. 1 211 45.894 T 12-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BAMF_3548 27e50026780f4865017006034df83fa0 212 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BAMF_3548 27e50026780f4865017006034df83fa0 212 ProSitePatterns PS00958 Transaldolase active site. 81 98 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BAMF_3548 27e50026780f4865017006034df83fa0 212 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 203 3.0E-57 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BAMF_3548 27e50026780f4865017006034df83fa0 212 Gene3D G3DSA:3.20.20.70 1 212 1.7E-92 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_3548 27e50026780f4865017006034df83fa0 212 SUPERFAMILY SSF51569 1 212 3.04E-76 T 12-10-2018 BAMF_2192 14f8054bdc9224e19a57b838dbb92d0e 218 Pfam PF07238 PilZ domain 98 205 3.5E-11 T 12-10-2018 IPR009875 PilZ domain GO:0035438 BAMF_2192 14f8054bdc9224e19a57b838dbb92d0e 218 Gene3D G3DSA:2.40.10.220 94 216 4.8E-11 T 12-10-2018 BAMF_2192 14f8054bdc9224e19a57b838dbb92d0e 218 Pfam PF12945 Flagellar protein YcgR 4 89 1.9E-13 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal BAMF_2192 14f8054bdc9224e19a57b838dbb92d0e 218 SUPERFAMILY SSF141371 97 201 5.49E-7 T 12-10-2018 BAMF_2106 8932729332fa2dab0217b4abb46f59be 366 Gene3D G3DSA:3.40.47.10 1 212 6.0E-62 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_2106 8932729332fa2dab0217b4abb46f59be 366 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 2 205 1.0E-19 T 12-10-2018 IPR001099 Chalcone/stilbene synthase, N-terminal BAMF_2106 8932729332fa2dab0217b4abb46f59be 366 SUPERFAMILY SSF53901 219 361 8.06E-36 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_2106 8932729332fa2dab0217b4abb46f59be 366 PIRSF PIRSF000451 1 364 1.6E-124 T 12-10-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 BAMF_2106 8932729332fa2dab0217b4abb46f59be 366 Gene3D G3DSA:3.40.47.10 218 362 8.7E-38 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_2106 8932729332fa2dab0217b4abb46f59be 366 SUPERFAMILY SSF53901 1 207 4.13E-45 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_2106 8932729332fa2dab0217b4abb46f59be 366 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 223 358 1.6E-17 T 12-10-2018 IPR012328 Chalcone/stilbene synthase, C-terminal BAMF_1721 26dd73881c440a2e75ab5dc2e1b7bfaa 246 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BAMF_1721 26dd73881c440a2e75ab5dc2e1b7bfaa 246 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 3.6E-114 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1721 26dd73881c440a2e75ab5dc2e1b7bfaa 246 Gene3D G3DSA:1.10.287.610 97 152 2.4E-97 T 12-10-2018 BAMF_1721 26dd73881c440a2e75ab5dc2e1b7bfaa 246 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.6E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_1721 26dd73881c440a2e75ab5dc2e1b7bfaa 246 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.6E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_1721 26dd73881c440a2e75ab5dc2e1b7bfaa 246 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.6E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_1721 26dd73881c440a2e75ab5dc2e1b7bfaa 246 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.6E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_1721 26dd73881c440a2e75ab5dc2e1b7bfaa 246 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.6E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_1721 26dd73881c440a2e75ab5dc2e1b7bfaa 246 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.6E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_1721 26dd73881c440a2e75ab5dc2e1b7bfaa 246 Pfam PF00318 Ribosomal protein S2 9 224 1.8E-102 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_1721 26dd73881c440a2e75ab5dc2e1b7bfaa 246 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 228 44.277 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1721 26dd73881c440a2e75ab5dc2e1b7bfaa 246 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BAMF_1721 26dd73881c440a2e75ab5dc2e1b7bfaa 246 SUPERFAMILY SSF52313 6 231 2.22E-101 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily BAMF_1721 26dd73881c440a2e75ab5dc2e1b7bfaa 246 Gene3D G3DSA:3.40.50.10490 10 215 2.4E-97 T 12-10-2018 BAMF_1109 76a8965cba81b743516b9a07842679e2 777 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 562 764 3.1E-73 T 12-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal BAMF_1109 76a8965cba81b743516b9a07842679e2 777 Pfam PF12698 ABC-2 family transporter protein 21 155 1.4E-10 T 12-10-2018 BAMF_1109 76a8965cba81b743516b9a07842679e2 777 Pfam PF12698 ABC-2 family transporter protein 541 758 1.5E-13 T 12-10-2018 BAMF_1109 76a8965cba81b743516b9a07842679e2 777 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 7 170 3.5E-60 T 12-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal BAMF_1109 76a8965cba81b743516b9a07842679e2 777 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 468 494 2.3E-4 T 12-10-2018 IPR023908 xxxLxxG heptad repeat BAMF_1109 76a8965cba81b743516b9a07842679e2 777 SUPERFAMILY SSF57997 199 370 3.92E-7 T 12-10-2018 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 SUPERFAMILY SSF51905 143 306 6.04E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 SUPERFAMILY SSF51905 4 191 3.51E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 626 762 5.0E-26 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 SUPERFAMILY SSF56014 627 793 2.62E-48 T 12-10-2018 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 Gene3D G3DSA:3.30.413.10 625 795 6.1E-38 T 12-10-2018 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.6E-23 T 12-10-2018 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.6E-23 T 12-10-2018 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.6E-23 T 12-10-2018 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 1.6E-23 T 12-10-2018 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 1.6E-23 T 12-10-2018 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 791 0.0 T 12-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 Gene3D G3DSA:3.30.390.30 316 399 1.7E-12 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 SUPERFAMILY SSF55124 514 635 1.06E-23 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.2E-14 T 12-10-2018 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.2E-14 T 12-10-2018 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 1.2E-14 T 12-10-2018 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 1.2E-14 T 12-10-2018 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 Gene3D G3DSA:3.50.50.60 110 244 3.2E-92 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 Gene3D G3DSA:1.10.10.1100 416 470 3.6E-11 T 12-10-2018 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 556 618 2.4E-13 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 282 1.4E-58 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 PRINTS PR00397 Sirohaem Fe-binding site signature 673 691 1.5E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 PRINTS PR00397 Sirohaem Fe-binding site signature 630 648 1.5E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 Pfam PF04324 BFD-like [2Fe-2S] binding domain 416 465 2.0E-13 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 Pfam PF04324 BFD-like [2Fe-2S] binding domain 481 530 2.5E-12 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 PIRSF PIRSF037149 1 805 0.0 T 12-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 BAMF_0300 84193eec515c8e32fcf885cdfa2ecb14 805 Gene3D G3DSA:3.50.50.60 7 280 3.2E-92 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_2847 7aea160617a715e9c597fa39ae98333a 145 Pfam PF00210 Ferritin-like domain 7 145 6.7E-32 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BAMF_2847 7aea160617a715e9c597fa39ae98333a 145 PIRSF PIRSF005900 1 145 4.1E-46 T 12-10-2018 IPR002177 DNA-binding protein Dps BAMF_2847 7aea160617a715e9c597fa39ae98333a 145 SUPERFAMILY SSF47240 3 145 1.13E-46 T 12-10-2018 IPR009078 Ferritin-like superfamily BAMF_2847 7aea160617a715e9c597fa39ae98333a 145 ProSitePatterns PS00818 Dps protein family signature 1. 27 43 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 BAMF_2847 7aea160617a715e9c597fa39ae98333a 145 ProSitePatterns PS00819 Dps protein family signature 2. 53 67 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 BAMF_2847 7aea160617a715e9c597fa39ae98333a 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 1.0E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps BAMF_2847 7aea160617a715e9c597fa39ae98333a 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 122 140 1.0E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps BAMF_2847 7aea160617a715e9c597fa39ae98333a 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 27 43 1.0E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps BAMF_2847 7aea160617a715e9c597fa39ae98333a 145 Gene3D G3DSA:1.20.1260.10 1 145 5.7E-54 T 12-10-2018 IPR012347 Ferritin-like BAMF_3881 8c9dfae2e8d436b2564d9ead18555c2e 514 SUPERFAMILY SSF75005 37 354 1.92E-82 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BAMF_3881 8c9dfae2e8d436b2564d9ead18555c2e 514 Gene3D G3DSA:2.115.10.20 42 357 5.7E-100 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BAMF_3881 8c9dfae2e8d436b2564d9ead18555c2e 514 SMART SM00640 45 473 6.5E-121 T 12-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 BAMF_3881 8c9dfae2e8d436b2564d9ead18555c2e 514 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 45 350 4.5E-81 T 12-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal BAMF_3881 8c9dfae2e8d436b2564d9ead18555c2e 514 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 356 506 2.8E-28 T 12-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal BAMF_3881 8c9dfae2e8d436b2564d9ead18555c2e 514 SUPERFAMILY SSF49899 354 512 5.8E-29 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BAMF_3881 8c9dfae2e8d436b2564d9ead18555c2e 514 Gene3D G3DSA:2.60.120.560 359 513 5.5E-39 T 12-10-2018 BAMF_3210 91dea3b184c09843da89b3d82d1488c6 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 259 1.4E-47 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BAMF_3210 91dea3b184c09843da89b3d82d1488c6 269 SMART SM00062 34 261 4.7E-68 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BAMF_3210 91dea3b184c09843da89b3d82d1488c6 269 Gene3D G3DSA:3.40.190.10 37 259 2.0E-78 T 12-10-2018 BAMF_3210 91dea3b184c09843da89b3d82d1488c6 269 Gene3D G3DSA:3.40.190.10 103 223 2.0E-78 T 12-10-2018 BAMF_3210 91dea3b184c09843da89b3d82d1488c6 269 SUPERFAMILY SSF53850 34 262 1.48E-49 T 12-10-2018 BAMF_0622 f2332ef48cdae2d578a0176ddbc037e9 512 SUPERFAMILY SSF49503 367 508 8.84E-34 T 12-10-2018 IPR008972 Cupredoxin BAMF_0622 f2332ef48cdae2d578a0176ddbc037e9 512 Gene3D G3DSA:2.60.40.420 1 174 1.5E-68 T 12-10-2018 IPR008972 Cupredoxin BAMF_0622 f2332ef48cdae2d578a0176ddbc037e9 512 Pfam PF07732 Multicopper oxidase 101 178 1.6E-5 T 12-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 BAMF_0622 f2332ef48cdae2d578a0176ddbc037e9 512 Pfam PF07732 Multicopper oxidase 45 81 1.3E-5 T 12-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 BAMF_0622 f2332ef48cdae2d578a0176ddbc037e9 512 Gene3D G3DSA:2.60.40.420 357 511 1.6E-56 T 12-10-2018 IPR008972 Cupredoxin BAMF_0622 f2332ef48cdae2d578a0176ddbc037e9 512 SUPERFAMILY SSF49503 3 179 8.35E-35 T 12-10-2018 IPR008972 Cupredoxin BAMF_0622 f2332ef48cdae2d578a0176ddbc037e9 512 Gene3D G3DSA:2.60.40.420 176 356 1.0E-68 T 12-10-2018 IPR008972 Cupredoxin BAMF_0622 f2332ef48cdae2d578a0176ddbc037e9 512 Pfam PF00394 Multicopper oxidase 243 323 1.7E-6 T 12-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 BAMF_0622 f2332ef48cdae2d578a0176ddbc037e9 512 SUPERFAMILY SSF49503 183 308 4.82E-28 T 12-10-2018 IPR008972 Cupredoxin BAMF_0622 f2332ef48cdae2d578a0176ddbc037e9 512 Pfam PF07731 Multicopper oxidase 374 511 1.2E-24 T 12-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 BAMF_0298 2c166de99cc6b345f1c33b1b33fd81ca 479 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BAMF_0298 2c166de99cc6b345f1c33b1b33fd81ca 479 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 241 1.4E-92 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BAMF_0298 2c166de99cc6b345f1c33b1b33fd81ca 479 Gene3D G3DSA:3.30.950.10 120 267 1.1E-47 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BAMF_0298 2c166de99cc6b345f1c33b1b33fd81ca 479 SUPERFAMILY SSF69618 253 447 3.01E-9 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_0298 2c166de99cc6b345f1c33b1b33fd81ca 479 Gene3D G3DSA:3.40.1010.10 2 119 6.6E-41 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BAMF_0298 2c166de99cc6b345f1c33b1b33fd81ca 479 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BAMF_0298 2c166de99cc6b345f1c33b1b33fd81ca 479 PIRSF PIRSF036426 1 254 2.6E-93 T 12-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BAMF_0298 2c166de99cc6b345f1c33b1b33fd81ca 479 SUPERFAMILY SSF53790 2 254 1.01E-77 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BAMF_0298 2c166de99cc6b345f1c33b1b33fd81ca 479 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 217 2.1E-44 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BAMF_3680 bb12d34a836d8f2e1e269905013041b2 311 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 18 305 19.029 T 12-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BAMF_3680 bb12d34a836d8f2e1e269905013041b2 311 Pfam PF01040 UbiA prenyltransferase family 35 266 6.2E-37 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BAMF_3680 bb12d34a836d8f2e1e269905013041b2 311 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 27 301 1.1E-32 T 12-10-2018 BAMF_3680 bb12d34a836d8f2e1e269905013041b2 311 PIRSF PIRSF005355 10 310 2.2E-94 T 12-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 BAMF_0461 08d2c925c4730a3f81673fb8518d3e8e 189 Pfam PF11193 Protein of unknown function (DUF2812) 9 113 2.3E-25 T 12-10-2018 IPR021359 Protein of unknown function DUF2812 BAMF_3259 7f98e8cd46e8118614e43df9249c59a8 362 SUPERFAMILY SSF53822 80 358 3.93E-61 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BAMF_3259 7f98e8cd46e8118614e43df9249c59a8 362 SUPERFAMILY SSF46785 3 71 6.5E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3259 7f98e8cd46e8118614e43df9249c59a8 362 SMART SM00345 8 67 1.5E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3259 7f98e8cd46e8118614e43df9249c59a8 362 Pfam PF13377 Periplasmic binding protein-like domain 194 357 1.1E-31 T 12-10-2018 BAMF_3259 7f98e8cd46e8118614e43df9249c59a8 362 Gene3D G3DSA:3.40.50.2300 82 349 4.5E-98 T 12-10-2018 BAMF_3259 7f98e8cd46e8118614e43df9249c59a8 362 Gene3D G3DSA:1.10.10.10 1 68 4.2E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3259 7f98e8cd46e8118614e43df9249c59a8 362 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 3.7E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3259 7f98e8cd46e8118614e43df9249c59a8 362 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 3.7E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3259 7f98e8cd46e8118614e43df9249c59a8 362 Gene3D G3DSA:3.40.50.2300 185 354 4.5E-98 T 12-10-2018 BAMF_3259 7f98e8cd46e8118614e43df9249c59a8 362 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 67 2.4E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3916 1b56c366266883b0f0b947a5cac4cc3d 239 SUPERFAMILY SSF53335 1 237 4.85E-49 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_3916 1b56c366266883b0f0b947a5cac4cc3d 239 Gene3D G3DSA:3.40.50.150 1 239 1.3E-89 T 12-10-2018 BAMF_3916 1b56c366266883b0f0b947a5cac4cc3d 239 Pfam PF02527 rRNA small subunit methyltransferase G 21 204 3.3E-60 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BAMF_3916 1b56c366266883b0f0b947a5cac4cc3d 239 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 216 1.4E-50 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BAMF_3916 1b56c366266883b0f0b947a5cac4cc3d 239 PIRSF PIRSF003078 1 220 4.1E-56 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BAMF_3916 1b56c366266883b0f0b947a5cac4cc3d 239 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 214 28.204 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BAMF_0168 d9c786c9c782ac774f2a2c23774f76d7 531 SUPERFAMILY SSF46689 165 214 2.33E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_0168 d9c786c9c782ac774f2a2c23774f76d7 531 Gene3D G3DSA:3.40.50.1980 380 529 3.2E-23 T 12-10-2018 BAMF_0168 d9c786c9c782ac774f2a2c23774f76d7 531 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 232 247 2.1E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BAMF_0168 d9c786c9c782ac774f2a2c23774f76d7 531 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 263 2.1E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BAMF_0168 d9c786c9c782ac774f2a2c23774f76d7 531 Gene3D G3DSA:1.10.10.2730 218 260 7.4E-15 T 12-10-2018 BAMF_0168 d9c786c9c782ac774f2a2c23774f76d7 531 SUPERFAMILY SSF46689 216 268 1.21E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_0168 d9c786c9c782ac774f2a2c23774f76d7 531 SMART SM00342 180 263 7.6E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BAMF_0168 d9c786c9c782ac774f2a2c23774f76d7 531 SUPERFAMILY SSF53807 268 523 1.45E-34 T 12-10-2018 BAMF_0168 d9c786c9c782ac774f2a2c23774f76d7 531 Pfam PF12833 Helix-turn-helix domain 186 264 7.0E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BAMF_0168 d9c786c9c782ac774f2a2c23774f76d7 531 Gene3D G3DSA:3.40.50.1980 261 377 1.4E-5 T 12-10-2018 BAMF_0168 d9c786c9c782ac774f2a2c23774f76d7 531 Gene3D G3DSA:1.10.10.60 161 217 8.6E-13 T 12-10-2018 BAMF_0168 d9c786c9c782ac774f2a2c23774f76d7 531 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 217 259 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BAMF_0168 d9c786c9c782ac774f2a2c23774f76d7 531 Pfam PF01497 Periplasmic binding protein 293 501 2.5E-19 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BAMF_1259 184f99c7a7dfe8c3806325c428691f69 250 SMART SM00849 59 230 3.4E-24 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_1259 184f99c7a7dfe8c3806325c428691f69 250 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 103 122 - T 12-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 BAMF_1259 184f99c7a7dfe8c3806325c428691f69 250 SUPERFAMILY SSF56281 23 244 1.26E-40 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_1259 184f99c7a7dfe8c3806325c428691f69 250 Pfam PF00753 Metallo-beta-lactamase superfamily 57 230 9.5E-14 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_1259 184f99c7a7dfe8c3806325c428691f69 250 Gene3D G3DSA:3.60.15.10 18 250 6.2E-73 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_1259 184f99c7a7dfe8c3806325c428691f69 250 ProSitePatterns PS00744 Beta-lactamases class B signature 2. 179 191 - T 12-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 BAMF_3180 c1d4cdd430ed4a73dc985fe96a009733 264 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 43 260 1.7E-67 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 BAMF_3180 c1d4cdd430ed4a73dc985fe96a009733 264 Pfam PF13531 Bacterial extracellular solute-binding protein 38 261 9.1E-53 T 12-10-2018 BAMF_3180 c1d4cdd430ed4a73dc985fe96a009733 264 Gene3D G3DSA:3.40.190.10 40 261 3.9E-81 T 12-10-2018 BAMF_3180 c1d4cdd430ed4a73dc985fe96a009733 264 PIRSF PIRSF004846 2 264 7.4E-91 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 BAMF_3180 c1d4cdd430ed4a73dc985fe96a009733 264 SUPERFAMILY SSF53850 37 262 2.15E-68 T 12-10-2018 BAMF_3180 c1d4cdd430ed4a73dc985fe96a009733 264 Gene3D G3DSA:3.40.190.10 117 224 3.9E-81 T 12-10-2018 BAMF_1559 96edd512bfcfb3d16c0477bfe52ee4e2 403 Pfam PF01098 Cell cycle protein 13 376 3.3E-116 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_1559 96edd512bfcfb3d16c0477bfe52ee4e2 403 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 333 357 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_2690 bad157a078b6487f071453d0e8d18da0 119 Gene3D G3DSA:1.10.1900.20 56 118 3.4E-29 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2690 bad157a078b6487f071453d0e8d18da0 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2690 bad157a078b6487f071453d0e8d18da0 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 4.0E-14 T 12-10-2018 BAMF_2690 bad157a078b6487f071453d0e8d18da0 119 Pfam PF00453 Ribosomal protein L20 3 109 4.4E-50 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2690 bad157a078b6487f071453d0e8d18da0 119 SUPERFAMILY SSF74731 2 116 1.24E-50 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2690 bad157a078b6487f071453d0e8d18da0 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.05 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2690 bad157a078b6487f071453d0e8d18da0 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 4.0E-51 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2690 bad157a078b6487f071453d0e8d18da0 119 Gene3D G3DSA:1.10.720.90 2 55 9.3E-27 T 12-10-2018 BAMF_2690 bad157a078b6487f071453d0e8d18da0 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.8E-41 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2690 bad157a078b6487f071453d0e8d18da0 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.8E-41 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2690 bad157a078b6487f071453d0e8d18da0 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.8E-41 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2464 c14fbf720721d8fc7294dfe69fd181cc 280 Gene3D G3DSA:3.40.50.720 101 241 1.1E-94 T 12-10-2018 BAMF_2464 c14fbf720721d8fc7294dfe69fd181cc 280 SUPERFAMILY SSF53223 2 101 2.13E-34 T 12-10-2018 BAMF_2464 c14fbf720721d8fc7294dfe69fd181cc 280 Gene3D G3DSA:3.40.50.10860 5 262 1.1E-94 T 12-10-2018 BAMF_2464 c14fbf720721d8fc7294dfe69fd181cc 280 SUPERFAMILY SSF51735 102 273 5.05E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2464 c14fbf720721d8fc7294dfe69fd181cc 280 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 272 35.144 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BAMF_2464 c14fbf720721d8fc7294dfe69fd181cc 280 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 117 194 5.4E-11 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BAMF_2464 c14fbf720721d8fc7294dfe69fd181cc 280 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 4.6E-30 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BAMF_2464 c14fbf720721d8fc7294dfe69fd181cc 280 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 275 1.7E-103 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BAMF_2753 cf86462d3a4362c9e5b6f5a73ff10371 563 Pfam PF06160 Septation ring formation regulator, EzrA 4 558 1.3E-169 T 12-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 BAMF_2753 cf86462d3a4362c9e5b6f5a73ff10371 563 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 1 563 22.514 T 12-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 BAMF_2285 85c83243fab6e58a9655b0e84defdd31 489 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 178 184 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BAMF_2285 85c83243fab6e58a9655b0e84defdd31 489 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 8 488 2.2E-208 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BAMF_2285 85c83243fab6e58a9655b0e84defdd31 489 Gene3D G3DSA:3.40.50.720 5 176 2.5E-58 T 12-10-2018 BAMF_2285 85c83243fab6e58a9655b0e84defdd31 489 SUPERFAMILY SSF51735 7 185 2.95E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2285 85c83243fab6e58a9655b0e84defdd31 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 220 237 2.5E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BAMF_2285 85c83243fab6e58a9655b0e84defdd31 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 144 157 2.5E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BAMF_2285 85c83243fab6e58a9655b0e84defdd31 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 329 355 2.5E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BAMF_2285 85c83243fab6e58a9655b0e84defdd31 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 238 254 2.5E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BAMF_2285 85c83243fab6e58a9655b0e84defdd31 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 168 196 2.5E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BAMF_2285 85c83243fab6e58a9655b0e84defdd31 489 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 8 488 90.373 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BAMF_2285 85c83243fab6e58a9655b0e84defdd31 489 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 12 188 3.1E-61 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BAMF_2285 85c83243fab6e58a9655b0e84defdd31 489 SUPERFAMILY SSF55347 183 487 1.14E-115 T 12-10-2018 BAMF_2285 85c83243fab6e58a9655b0e84defdd31 489 Gene3D G3DSA:3.30.360.10 177 488 1.4E-124 T 12-10-2018 BAMF_2285 85c83243fab6e58a9655b0e84defdd31 489 PIRSF PIRSF000110 1 489 2.1E-187 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BAMF_2285 85c83243fab6e58a9655b0e84defdd31 489 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 486 2.5E-114 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BAMF_1815 8607d70f17e09c2fb1a9d7897f97155b 444 SUPERFAMILY SSF55931 105 442 3.92E-129 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BAMF_1815 8607d70f17e09c2fb1a9d7897f97155b 444 Pfam PF00120 Glutamine synthetase, catalytic domain 106 440 3.0E-141 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BAMF_1815 8607d70f17e09c2fb1a9d7897f97155b 444 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 441 2.7E-191 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BAMF_1815 8607d70f17e09c2fb1a9d7897f97155b 444 Gene3D G3DSA:3.10.20.70 2 107 8.4E-47 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BAMF_1815 8607d70f17e09c2fb1a9d7897f97155b 444 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 234 249 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BAMF_1815 8607d70f17e09c2fb1a9d7897f97155b 444 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 99 1.0E-33 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BAMF_1815 8607d70f17e09c2fb1a9d7897f97155b 444 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 361 373 - T 12-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BAMF_1815 8607d70f17e09c2fb1a9d7897f97155b 444 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BAMF_1815 8607d70f17e09c2fb1a9d7897f97155b 444 SMART SM01230 105 354 1.5E-139 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BAMF_1815 8607d70f17e09c2fb1a9d7897f97155b 444 SUPERFAMILY SSF54368 5 104 4.71E-36 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BAMF_1815 8607d70f17e09c2fb1a9d7897f97155b 444 Gene3D G3DSA:3.30.590.10 108 444 8.5E-149 T 12-10-2018 BAMF_0287 3efafbb0ed6649ac063e8e8538238eca 263 Gene3D G3DSA:3.20.20.150 1 260 1.5E-58 T 12-10-2018 BAMF_0287 3efafbb0ed6649ac063e8e8538238eca 263 SUPERFAMILY SSF51658 1 252 1.23E-44 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily BAMF_0287 3efafbb0ed6649ac063e8e8538238eca 263 Pfam PF01261 Xylose isomerase-like TIM barrel 20 217 5.9E-31 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain BAMF_2940 95acddef06e29af5a2d5aeb783f03ead 389 Gene3D G3DSA:3.90.1150.10 32 380 5.5E-131 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_2940 95acddef06e29af5a2d5aeb783f03ead 389 SUPERFAMILY SSF53383 7 387 4.44E-121 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_2940 95acddef06e29af5a2d5aeb783f03ead 389 Gene3D G3DSA:3.40.640.10 63 284 5.5E-131 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_2940 95acddef06e29af5a2d5aeb783f03ead 389 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BAMF_2940 95acddef06e29af5a2d5aeb783f03ead 389 Pfam PF00155 Aminotransferase class I and II 32 381 4.1E-69 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_2188 835637623dc8058c25861eaa95cd5825 349 SUPERFAMILY SSF51395 23 346 3.3E-89 T 12-10-2018 BAMF_2188 835637623dc8058c25861eaa95cd5825 349 Pfam PF01070 FMN-dependent dehydrogenase 167 324 4.4E-19 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 BAMF_2188 835637623dc8058c25861eaa95cd5825 349 Pfam PF01070 FMN-dependent dehydrogenase 17 96 2.4E-6 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 BAMF_2188 835637623dc8058c25861eaa95cd5825 349 Gene3D G3DSA:3.20.20.70 2 349 3.4E-128 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_2188 835637623dc8058c25861eaa95cd5825 349 PIRSF PIRSF003314 1 340 1.3E-124 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 BAMF_2188 835637623dc8058c25861eaa95cd5825 349 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 5 329 2.9E-122 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 BAMF_2188 835637623dc8058c25861eaa95cd5825 349 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 3 330 38.859 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 BAMF_3264 ae1f5c4227dd56e83febc2c2a0733163 285 Gene3D G3DSA:3.40.50.10490 99 284 7.8E-55 T 12-10-2018 BAMF_3264 ae1f5c4227dd56e83febc2c2a0733163 285 SUPERFAMILY SSF53697 99 282 1.67E-48 T 12-10-2018 BAMF_3264 ae1f5c4227dd56e83febc2c2a0733163 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 11 81 4.0E-19 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BAMF_3264 ae1f5c4227dd56e83febc2c2a0733163 285 Gene3D G3DSA:1.10.10.10 3 85 1.8E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3264 ae1f5c4227dd56e83febc2c2a0733163 285 Pfam PF01380 SIS domain 130 258 4.2E-22 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BAMF_3264 ae1f5c4227dd56e83febc2c2a0733163 285 SUPERFAMILY SSF46689 9 82 9.68E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_2364 a8c0120ca6f47474b8c06bdbde65bfb4 113 SUPERFAMILY SSF47406 76 109 1.31E-12 T 12-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 BAMF_2364 a8c0120ca6f47474b8c06bdbde65bfb4 113 Gene3D G3DSA:1.10.260.40 3 113 9.5E-34 T 12-10-2018 BAMF_2364 a8c0120ca6f47474b8c06bdbde65bfb4 113 Pfam PF08671 Anti-repressor SinI 76 103 8.4E-13 T 12-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 BAMF_2364 a8c0120ca6f47474b8c06bdbde65bfb4 113 Pfam PF01381 Helix-turn-helix 8 60 3.3E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_2364 a8c0120ca6f47474b8c06bdbde65bfb4 113 SMART SM00530 7 63 2.5E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_2364 a8c0120ca6f47474b8c06bdbde65bfb4 113 SUPERFAMILY SSF47413 2 69 1.69E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 Gene3D G3DSA:2.40.40.20 835 959 1.1E-27 T 12-10-2018 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 Gene3D G3DSA:2.20.25.90 278 333 4.7E-18 T 12-10-2018 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 Pfam PF01568 Molydopterin dinucleotide binding domain 841 948 1.1E-20 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 SMART SM00926 278 332 9.7E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 SUPERFAMILY SSF50692 814 953 2.94E-34 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 103 140 8.1E-12 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 Gene3D G3DSA:3.30.70.20 145 229 2.8E-20 T 12-10-2018 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 279 332 2.0E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 SMART SM00929 101 142 2.1E-14 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 SUPERFAMILY SSF54292 22 144 2.95E-31 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 Pfam PF12838 4Fe-4S dicluster domain 167 225 6.4E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 SUPERFAMILY SSF54862 154 235 7.32E-17 T 12-10-2018 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 283 951 3.7E-245 T 12-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 Gene3D G3DSA:3.40.228.10 413 612 1.7E-164 T 12-10-2018 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 Gene3D G3DSA:3.10.20.740 22 142 6.5E-32 T 12-10-2018 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 211 222 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 21 92 6.5E-16 T 12-10-2018 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 SUPERFAMILY SSF53706 272 802 5.89E-193 T 12-10-2018 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 Pfam PF00384 Molybdopterin oxidoreductase 335 758 1.9E-85 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 Gene3D G3DSA:3.40.50.740 340 792 1.7E-164 T 12-10-2018 BAMF_2530 bccb04eb20600ba141e1dd6172d1ff6c 995 PIRSF PIRSF036643 17 985 0.0 T 12-10-2018 BAMF_1108 8206993f5e19a789ad385aaa09a50cbc 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_1108 8206993f5e19a789ad385aaa09a50cbc 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_1108 8206993f5e19a789ad385aaa09a50cbc 190 SUPERFAMILY SSF46689 4 77 2.64E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_1108 8206993f5e19a789ad385aaa09a50cbc 190 Gene3D G3DSA:1.10.357.10 2 187 1.4E-36 T 12-10-2018 BAMF_1108 8206993f5e19a789ad385aaa09a50cbc 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 4.4E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_1108 8206993f5e19a789ad385aaa09a50cbc 190 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 51 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BAMF_1108 8206993f5e19a789ad385aaa09a50cbc 190 SUPERFAMILY SSF48498 81 183 1.47E-11 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BAMF_1421 2af7a317782a6a93507acf3303f1d622 611 Pfam PF01068 ATP dependent DNA ligase domain 16 208 6.7E-34 T 12-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 BAMF_1421 2af7a317782a6a93507acf3303f1d622 611 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 5 310 1.1E-80 T 12-10-2018 IPR014146 DNA ligase D, ligase domain BAMF_1421 2af7a317782a6a93507acf3303f1d622 611 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 13 592 1.1E-191 T 12-10-2018 IPR014143 DNA ligase D BAMF_1421 2af7a317782a6a93507acf3303f1d622 611 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 325 564 4.8E-84 T 12-10-2018 IPR014145 DNA ligase D, polymerase domain BAMF_1421 2af7a317782a6a93507acf3303f1d622 611 SUPERFAMILY SSF56091 12 208 7.2E-38 T 12-10-2018 BAMF_1421 2af7a317782a6a93507acf3303f1d622 611 Gene3D G3DSA:3.30.470.30 4 208 4.5E-38 T 12-10-2018 BAMF_1421 2af7a317782a6a93507acf3303f1d622 611 Gene3D G3DSA:3.90.920.30 331 604 1.2E-80 T 12-10-2018 BAMF_1421 2af7a317782a6a93507acf3303f1d622 611 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 22 30 - T 12-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 BAMF_0075 5b0a598b33e74823dff13db80fd9d180 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 7.9E-92 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_0075 5b0a598b33e74823dff13db80fd9d180 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.7E-35 T 12-10-2018 BAMF_0075 5b0a598b33e74823dff13db80fd9d180 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.7E-35 T 12-10-2018 BAMF_0075 5b0a598b33e74823dff13db80fd9d180 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.7E-35 T 12-10-2018 BAMF_0075 5b0a598b33e74823dff13db80fd9d180 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.7E-35 T 12-10-2018 BAMF_0075 5b0a598b33e74823dff13db80fd9d180 195 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.7E-35 T 12-10-2018 BAMF_0075 5b0a598b33e74823dff13db80fd9d180 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.7E-35 T 12-10-2018 BAMF_0075 5b0a598b33e74823dff13db80fd9d180 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.1E-13 T 12-10-2018 BAMF_0075 5b0a598b33e74823dff13db80fd9d180 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.1E-13 T 12-10-2018 BAMF_0075 5b0a598b33e74823dff13db80fd9d180 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 4.1E-13 T 12-10-2018 BAMF_0075 5b0a598b33e74823dff13db80fd9d180 195 Gene3D G3DSA:3.40.50.880 1 190 1.0E-62 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_0075 5b0a598b33e74823dff13db80fd9d180 195 Pfam PF00117 Glutamine amidotransferase class-I 4 185 2.5E-55 T 12-10-2018 IPR017926 Glutamine amidotransferase BAMF_0075 5b0a598b33e74823dff13db80fd9d180 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 7.5E-7 T 12-10-2018 BAMF_0075 5b0a598b33e74823dff13db80fd9d180 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 7.5E-7 T 12-10-2018 BAMF_0075 5b0a598b33e74823dff13db80fd9d180 195 SUPERFAMILY SSF52317 1 189 7.64E-57 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_1667 a3b7f1bfa79a5ec7139d1f4405a648e1 329 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 46 321 66.039 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BAMF_1667 a3b7f1bfa79a5ec7139d1f4405a648e1 329 Gene3D G3DSA:1.20.120.140 20 318 3.4E-115 T 12-10-2018 BAMF_1667 a3b7f1bfa79a5ec7139d1f4405a648e1 329 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 294 307 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BAMF_1667 a3b7f1bfa79a5ec7139d1f4405a648e1 329 Pfam PF00448 SRP54-type protein, GTPase domain 121 320 2.0E-80 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BAMF_1667 a3b7f1bfa79a5ec7139d1f4405a648e1 329 Pfam PF02881 SRP54-type protein, helical bundle domain 33 99 1.4E-15 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BAMF_1667 a3b7f1bfa79a5ec7139d1f4405a648e1 329 SMART SM00962 120 321 1.2E-120 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BAMF_1667 a3b7f1bfa79a5ec7139d1f4405a648e1 329 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 46 320 7.5E-119 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BAMF_1667 a3b7f1bfa79a5ec7139d1f4405a648e1 329 Gene3D G3DSA:3.40.50.300 112 309 3.4E-115 T 12-10-2018 BAMF_1667 a3b7f1bfa79a5ec7139d1f4405a648e1 329 SUPERFAMILY SSF52540 119 320 2.0E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1667 a3b7f1bfa79a5ec7139d1f4405a648e1 329 SMART SM00963 22 103 1.1E-27 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BAMF_1667 a3b7f1bfa79a5ec7139d1f4405a648e1 329 SUPERFAMILY SSF47364 18 96 5.1E-22 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 BAMF_1667 a3b7f1bfa79a5ec7139d1f4405a648e1 329 SMART SM00382 119 320 1.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2796 89583f9c9b1d6409a53d1a0e771fc1f4 353 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 336 6.0E-68 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BAMF_2796 89583f9c9b1d6409a53d1a0e771fc1f4 353 TIGRFAM TIGR01136 cysKM: cysteine synthase 51 350 1.6E-125 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BAMF_2796 89583f9c9b1d6409a53d1a0e771fc1f4 353 Gene3D G3DSA:3.40.50.1100 88 189 3.2E-115 T 12-10-2018 BAMF_2796 89583f9c9b1d6409a53d1a0e771fc1f4 353 SUPERFAMILY SSF53686 45 350 2.88E-96 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BAMF_2796 89583f9c9b1d6409a53d1a0e771fc1f4 353 Gene3D G3DSA:3.40.50.1100 52 345 3.2E-115 T 12-10-2018 BAMF_2796 89583f9c9b1d6409a53d1a0e771fc1f4 353 TIGRFAM TIGR01139 cysK: cysteine synthase A 51 350 1.1E-133 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BAMF_2796 89583f9c9b1d6409a53d1a0e771fc1f4 353 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 76 94 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BAMF_2717 05ca96aac03ae854d932f64040c616ca 372 PIRSF PIRSF001369 1 372 1.0E-160 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type BAMF_2717 05ca96aac03ae854d932f64040c616ca 372 ProSitePatterns PS00480 Citrate synthase signature. 254 266 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BAMF_2717 05ca96aac03ae854d932f64040c616ca 372 Gene3D G3DSA:1.10.230.10 220 318 2.9E-127 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain BAMF_2717 05ca96aac03ae854d932f64040c616ca 372 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 5 371 1.7E-170 T 12-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 BAMF_2717 05ca96aac03ae854d932f64040c616ca 372 Pfam PF00285 Citrate synthase, C-terminal domain 6 354 4.4E-128 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_2717 05ca96aac03ae854d932f64040c616ca 372 Gene3D G3DSA:1.10.580.10 25 351 2.9E-127 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BAMF_2717 05ca96aac03ae854d932f64040c616ca 372 PRINTS PR00143 Citrate synthase signature 123 136 1.5E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_2717 05ca96aac03ae854d932f64040c616ca 372 PRINTS PR00143 Citrate synthase signature 172 187 1.5E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_2717 05ca96aac03ae854d932f64040c616ca 372 PRINTS PR00143 Citrate synthase signature 304 320 1.5E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_2717 05ca96aac03ae854d932f64040c616ca 372 PRINTS PR00143 Citrate synthase signature 324 338 1.5E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_2717 05ca96aac03ae854d932f64040c616ca 372 PRINTS PR00143 Citrate synthase signature 194 222 1.5E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_2717 05ca96aac03ae854d932f64040c616ca 372 PRINTS PR00143 Citrate synthase signature 247 267 1.5E-43 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_2717 05ca96aac03ae854d932f64040c616ca 372 SUPERFAMILY SSF48256 2 371 1.7E-135 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 BAMF_0888 755f4f4ffcdd975b2c19fe62ac33dec2 82 SUPERFAMILY SSF55174 3 74 2.09E-9 T 12-10-2018 BAMF_0371 7c00df37c4b7a224338d5509f4136b36 249 SUPERFAMILY SSF56784 9 248 8.8E-69 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_0371 7c00df37c4b7a224338d5509f4136b36 249 Gene3D G3DSA:3.40.50.1000 175 244 2.3E-35 T 12-10-2018 IPR023214 HAD superfamily BAMF_0371 7c00df37c4b7a224338d5509f4136b36 249 ProSitePatterns PS01229 Hypothetical cof family signature 2. 198 220 - T 12-10-2018 BAMF_0371 7c00df37c4b7a224338d5509f4136b36 249 Gene3D G3DSA:3.40.50.1000 11 89 3.4E-26 T 12-10-2018 IPR023214 HAD superfamily BAMF_0371 7c00df37c4b7a224338d5509f4136b36 249 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 221 233 2.2E-5 T 12-10-2018 BAMF_0371 7c00df37c4b7a224338d5509f4136b36 249 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 14 28 2.2E-5 T 12-10-2018 BAMF_0371 7c00df37c4b7a224338d5509f4136b36 249 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 198 217 2.2E-5 T 12-10-2018 BAMF_0371 7c00df37c4b7a224338d5509f4136b36 249 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 12-10-2018 BAMF_0371 7c00df37c4b7a224338d5509f4136b36 249 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 217 6.7E-29 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BAMF_0371 7c00df37c4b7a224338d5509f4136b36 249 Gene3D G3DSA:3.30.1240.10 90 119 3.4E-26 T 12-10-2018 BAMF_0371 7c00df37c4b7a224338d5509f4136b36 249 Gene3D G3DSA:3.30.1240.10 129 174 2.3E-35 T 12-10-2018 BAMF_0371 7c00df37c4b7a224338d5509f4136b36 249 TIGRFAM TIGR01482 SPP-subfamily: sucrose-phosphate phosphatase subfamily 13 244 6.4E-33 T 12-10-2018 BAMF_0371 7c00df37c4b7a224338d5509f4136b36 249 Pfam PF08282 haloacid dehalogenase-like hydrolase 126 244 9.5E-32 T 12-10-2018 BAMF_2061 f18f9b5e4447b84d267baef73bd76197 318 Pfam PF12996 DUF based on E. rectale Gene description (DUF3880) 80 152 1.2E-12 T 12-10-2018 IPR024542 Domain of unknown function DUF3880 BAMF_2061 f18f9b5e4447b84d267baef73bd76197 318 Pfam PF13524 Glycosyl transferases group 1 212 304 2.9E-12 T 12-10-2018 BAMF_2061 f18f9b5e4447b84d267baef73bd76197 318 SUPERFAMILY SSF53756 41 217 1.02E-9 T 12-10-2018 BAMF_1662 11a9badbb269ffee47be9af71c14fec5 317 Gene3D G3DSA:3.30.70.250 126 199 3.3E-100 T 12-10-2018 BAMF_1662 11a9badbb269ffee47be9af71c14fec5 317 Gene3D G3DSA:3.40.366.10 6 286 3.3E-100 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 BAMF_1662 11a9badbb269ffee47be9af71c14fec5 317 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 314 2.6E-39 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain BAMF_1662 11a9badbb269ffee47be9af71c14fec5 317 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 8.0E-128 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BAMF_1662 11a9badbb269ffee47be9af71c14fec5 317 SUPERFAMILY SSF52151 4 310 6.54E-79 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BAMF_1662 11a9badbb269ffee47be9af71c14fec5 317 SUPERFAMILY SSF55048 128 193 5.75E-15 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BAMF_1662 11a9badbb269ffee47be9af71c14fec5 317 PIRSF PIRSF000446 1 311 3.5E-137 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BAMF_1662 11a9badbb269ffee47be9af71c14fec5 317 Pfam PF00698 Acyl transferase domain 6 291 7.5E-44 T 12-10-2018 IPR014043 Acyl transferase BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 6 802 33.277 T 12-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 Gene3D G3DSA:1.10.268.10 368 456 6.8E-199 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 549 598 3.9E-6 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 656 696 2.8E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 704 752 3.5E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 606 650 2.4E-8 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 507 519 1.5 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 Gene3D G3DSA:3.90.199.10 31 485 6.8E-199 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 793 9.1E-271 T 12-10-2018 BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 7 744 0.0 T 12-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 31 467 1.8E-152 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 SUPERFAMILY SSF101904 499 804 7.72E-96 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 SUPERFAMILY SSF56719 30 485 1.96E-170 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 Gene3D G3DSA:3.30.1360.40 235 331 6.8E-199 T 12-10-2018 BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 Gene3D G3DSA:2.120.10.90 499 807 1.7E-103 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BAMF_1897 f30ff72f6b73f5f489d986025b44ac66 807 SMART SM00434 10 463 9.9E-265 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BAMF_2512 9ddce5f2c7c06bf627e443dc17a38d13 139 Gene3D G3DSA:3.30.1240.10 2 58 7.3E-40 T 12-10-2018 BAMF_2512 9ddce5f2c7c06bf627e443dc17a38d13 139 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 128 5.2E-34 T 12-10-2018 BAMF_2512 9ddce5f2c7c06bf627e443dc17a38d13 139 Gene3D G3DSA:3.40.50.1000 59 128 7.3E-40 T 12-10-2018 IPR023214 HAD superfamily BAMF_2512 9ddce5f2c7c06bf627e443dc17a38d13 139 SUPERFAMILY SSF56784 4 132 3.12E-37 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_1955 bc17ef5a7896a353f215a6caf9480f76 125 PIRSF PIRSF021424 4 125 1.0E-75 T 12-10-2018 IPR003432 Replication terminator protein GO:0003677|GO:0006274 BAMF_1955 bc17ef5a7896a353f215a6caf9480f76 125 ProDom PD077583 REPLICATION TRANSCRIPTION DNA-BINDING TERMINATOR REGULATION TERMINATION 3D-STRUCTURE 14 125 4.0E-58 T 12-10-2018 IPR003432 Replication terminator protein GO:0003677|GO:0006274 BAMF_1955 bc17ef5a7896a353f215a6caf9480f76 125 Pfam PF02334 Replication terminator protein 4 125 4.4E-79 T 12-10-2018 IPR003432 Replication terminator protein GO:0003677|GO:0006274 BAMF_1955 bc17ef5a7896a353f215a6caf9480f76 125 Gene3D G3DSA:1.10.10.10 4 125 5.6E-50 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1955 bc17ef5a7896a353f215a6caf9480f76 125 SUPERFAMILY SSF46785 10 124 1.32E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3445 2b0f93b224595dc24f811f046448d0ce 571 Gene3D G3DSA:3.40.50.970 368 571 3.8E-62 T 12-10-2018 BAMF_3445 2b0f93b224595dc24f811f046448d0ce 571 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 17 554 3.5E-271 T 12-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BAMF_3445 2b0f93b224595dc24f811f046448d0ce 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 16 181 3.5E-52 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BAMF_3445 2b0f93b224595dc24f811f046448d0ce 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 397 543 3.7E-43 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BAMF_3445 2b0f93b224595dc24f811f046448d0ce 571 SUPERFAMILY SSF52518 16 189 3.34E-49 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_3445 2b0f93b224595dc24f811f046448d0ce 571 SUPERFAMILY SSF52467 195 339 2.32E-33 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BAMF_3445 2b0f93b224595dc24f811f046448d0ce 571 Gene3D G3DSA:3.40.50.1220 193 367 4.7E-39 T 12-10-2018 BAMF_3445 2b0f93b224595dc24f811f046448d0ce 571 SUPERFAMILY SSF52518 374 554 5.47E-58 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_3445 2b0f93b224595dc24f811f046448d0ce 571 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 202 335 1.7E-26 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BAMF_3445 2b0f93b224595dc24f811f046448d0ce 571 Gene3D G3DSA:3.40.50.970 1 192 1.8E-70 T 12-10-2018 BAMF_3445 2b0f93b224595dc24f811f046448d0ce 571 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 434 453 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 BAMF_3287 db475115827285ab34ac5e8bfd2ab773 597 Pfam PF13727 CoA-binding domain 64 226 2.7E-17 T 12-10-2018 BAMF_3287 db475115827285ab34ac5e8bfd2ab773 597 Pfam PF02719 Polysaccharide biosynthesis protein 271 552 1.4E-121 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BAMF_3287 db475115827285ab34ac5e8bfd2ab773 597 SUPERFAMILY SSF51735 129 258 9.45E-14 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3287 db475115827285ab34ac5e8bfd2ab773 597 Gene3D G3DSA:3.40.50.720 266 589 2.7E-114 T 12-10-2018 BAMF_3287 db475115827285ab34ac5e8bfd2ab773 597 Gene3D G3DSA:3.40.50.720 126 252 3.0E-30 T 12-10-2018 BAMF_3287 db475115827285ab34ac5e8bfd2ab773 597 SUPERFAMILY SSF51735 268 532 5.72E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0523 31d53b9a85445676410bf07c6e2e3035 284 Pfam PF05067 Manganese containing catalase 2 276 1.2E-67 T 12-10-2018 IPR007760 Manganese catalase BAMF_0523 31d53b9a85445676410bf07c6e2e3035 284 Gene3D G3DSA:1.20.1260.130 4 284 7.1E-102 T 12-10-2018 BAMF_0523 31d53b9a85445676410bf07c6e2e3035 284 SUPERFAMILY SSF47240 2 283 2.88E-86 T 12-10-2018 IPR009078 Ferritin-like superfamily BAMF_0349 f8d52d9776ac0d4162f31ceae4923b9d 315 Pfam PF01032 FecCD transport family 36 310 8.1E-53 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BAMF_0349 f8d52d9776ac0d4162f31ceae4923b9d 315 SUPERFAMILY SSF81345 6 310 5.75E-58 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_0349 f8d52d9776ac0d4162f31ceae4923b9d 315 Gene3D G3DSA:1.10.3470.10 6 314 2.5E-55 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_0138 da9febdf52be5beabecedf2dbe4411c6 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 2.0E-24 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_0138 da9febdf52be5beabecedf2dbe4411c6 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 2.0E-24 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_0138 da9febdf52be5beabecedf2dbe4411c6 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 2.0E-24 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_0138 da9febdf52be5beabecedf2dbe4411c6 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 2.0E-24 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_0138 da9febdf52be5beabecedf2dbe4411c6 248 SUPERFAMILY SSF55920 1 247 2.22E-90 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like BAMF_0138 da9febdf52be5beabecedf2dbe4411c6 248 Gene3D G3DSA:3.90.230.10 1 248 8.8E-109 T 12-10-2018 BAMF_0138 da9febdf52be5beabecedf2dbe4411c6 248 Pfam PF00557 Metallopeptidase family M24 13 239 6.4E-57 T 12-10-2018 IPR000994 Peptidase M24 BAMF_0138 da9febdf52be5beabecedf2dbe4411c6 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 43.405 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_0138 da9febdf52be5beabecedf2dbe4411c6 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_0138 da9febdf52be5beabecedf2dbe4411c6 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 3.7E-104 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_3364 fb6e8656806f70039ae7949eedb04170 466 Gene3D G3DSA:2.30.42.10 98 185 9.2E-90 T 12-10-2018 BAMF_3364 fb6e8656806f70039ae7949eedb04170 466 SMART SM00245 171 362 1.1E-78 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BAMF_3364 fb6e8656806f70039ae7949eedb04170 466 SUPERFAMILY SSF50156 69 189 1.58E-23 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BAMF_3364 fb6e8656806f70039ae7949eedb04170 466 Pfam PF03572 Peptidase family S41 200 361 4.5E-49 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BAMF_3364 fb6e8656806f70039ae7949eedb04170 466 SMART SM00228 98 169 7.6E-18 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_3364 fb6e8656806f70039ae7949eedb04170 466 Pfam PF13180 PDZ domain 99 175 4.5E-15 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_3364 fb6e8656806f70039ae7949eedb04170 466 SUPERFAMILY SSF47090 371 445 1.44E-14 T 12-10-2018 IPR036365 PGBD-like superfamily BAMF_3364 fb6e8656806f70039ae7949eedb04170 466 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 50 368 1.6E-130 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 BAMF_3364 fb6e8656806f70039ae7949eedb04170 466 Pfam PF01471 Putative peptidoglycan binding domain 384 439 1.2E-11 T 12-10-2018 IPR002477 Peptidoglycan binding-like BAMF_3364 fb6e8656806f70039ae7949eedb04170 466 SUPERFAMILY SSF52096 38 366 1.13E-69 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_3364 fb6e8656806f70039ae7949eedb04170 466 Gene3D G3DSA:1.10.101.10 371 451 3.7E-13 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BAMF_3364 fb6e8656806f70039ae7949eedb04170 466 Gene3D G3DSA:3.30.750.44 48 337 9.2E-90 T 12-10-2018 BAMF_3364 fb6e8656806f70039ae7949eedb04170 466 Gene3D G3DSA:3.90.226.10 186 359 9.2E-90 T 12-10-2018 BAMF_3755 bc9917f615c977da6614f2ac18e903f8 603 Pfam PF10592 AIPR protein 239 568 1.6E-64 T 12-10-2018 IPR018891 Abortive bacteriophage infection, resistance BAMF_3582 b833a628cd95b3e05581ff6645ede296 460 Gene3D G3DSA:1.20.1740.10 21 460 1.2E-121 T 12-10-2018 BAMF_3582 b833a628cd95b3e05581ff6645ede296 460 Pfam PF13520 Amino acid permease 30 434 1.3E-59 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_3582 b833a628cd95b3e05581ff6645ede296 460 PIRSF PIRSF006060 6 460 9.0E-85 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_1530 955759193f76dda4d11a863a7b9d1d1e 184 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 180 6.6E-54 T 12-10-2018 IPR023635 Peptide deformylase BAMF_1530 955759193f76dda4d11a863a7b9d1d1e 184 Pfam PF01327 Polypeptide deformylase 4 171 5.5E-46 T 12-10-2018 IPR023635 Peptide deformylase BAMF_1530 955759193f76dda4d11a863a7b9d1d1e 184 Gene3D G3DSA:3.90.45.10 1 184 9.4E-67 T 12-10-2018 IPR036821 Peptide deformylase superfamily BAMF_1530 955759193f76dda4d11a863a7b9d1d1e 184 PRINTS PR01576 Peptide deformylase signature 121 139 6.0E-30 T 12-10-2018 IPR023635 Peptide deformylase BAMF_1530 955759193f76dda4d11a863a7b9d1d1e 184 PRINTS PR01576 Peptide deformylase signature 108 119 6.0E-30 T 12-10-2018 IPR023635 Peptide deformylase BAMF_1530 955759193f76dda4d11a863a7b9d1d1e 184 PRINTS PR01576 Peptide deformylase signature 47 76 6.0E-30 T 12-10-2018 IPR023635 Peptide deformylase BAMF_1530 955759193f76dda4d11a863a7b9d1d1e 184 PRINTS PR01576 Peptide deformylase signature 140 169 6.0E-30 T 12-10-2018 IPR023635 Peptide deformylase BAMF_1530 955759193f76dda4d11a863a7b9d1d1e 184 Hamap MF_00163 Peptide deformylase [def]. 3 182 27.453 T 12-10-2018 IPR023635 Peptide deformylase BAMF_1530 955759193f76dda4d11a863a7b9d1d1e 184 PIRSF PIRSF004749 2 184 2.1E-47 T 12-10-2018 IPR023635 Peptide deformylase BAMF_1530 955759193f76dda4d11a863a7b9d1d1e 184 SUPERFAMILY SSF56420 2 182 5.76E-58 T 12-10-2018 IPR036821 Peptide deformylase superfamily BAMF_1895 adb2a32b8780c5045591a56ce9ac5e40 135 Pfam PF13380 CoA binding domain 17 130 1.1E-33 T 12-10-2018 IPR003781 CoA-binding GO:0048037 BAMF_1895 adb2a32b8780c5045591a56ce9ac5e40 135 Gene3D G3DSA:3.40.50.720 1 134 4.9E-37 T 12-10-2018 BAMF_1895 adb2a32b8780c5045591a56ce9ac5e40 135 SUPERFAMILY SSF51735 6 131 1.21E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1895 adb2a32b8780c5045591a56ce9ac5e40 135 SMART SM00881 12 105 8.3E-16 T 12-10-2018 IPR003781 CoA-binding GO:0048037 BAMF_0072 cd382f3424334414444722b32a814f72 296 Gene3D G3DSA:3.10.50.40 154 247 8.6E-30 T 12-10-2018 BAMF_0072 cd382f3424334414444722b32a814f72 296 SUPERFAMILY SSF54534 146 245 4.55E-19 T 12-10-2018 BAMF_0072 cd382f3424334414444722b32a814f72 296 Pfam PF13145 PPIC-type PPIASE domain 134 259 2.3E-19 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 BAMF_0072 cd382f3424334414444722b32a814f72 296 Gene3D G3DSA:1.10.4030.30 40 153 8.6E-30 T 12-10-2018 BAMF_0072 cd382f3424334414444722b32a814f72 296 SUPERFAMILY SSF109998 37 182 4.71E-24 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily BAMF_0072 cd382f3424334414444722b32a814f72 296 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 182 203 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 BAMF_0072 cd382f3424334414444722b32a814f72 296 Pfam PF13624 SurA N-terminal domain 7 127 8.3E-7 T 12-10-2018 BAMF_0883 85df270205229cfd6a570a3a7cf6706d 294 Gene3D G3DSA:1.20.120.330 115 232 1.8E-48 T 12-10-2018 BAMF_0883 85df270205229cfd6a570a3a7cf6706d 294 ProDom PD128250 YGXA BH0953 1 279 1.0E-141 T 12-10-2018 BAMF_0883 85df270205229cfd6a570a3a7cf6706d 294 Pfam PF14540 Nucleotidyltransferase-like 1 118 2.1E-48 T 12-10-2018 IPR029348 Nucleotidyltransferase-like domain BAMF_0883 85df270205229cfd6a570a3a7cf6706d 294 Gene3D G3DSA:3.30.460.10 1 114 5.8E-45 T 12-10-2018 BAMF_1225 aa24152af98bba028b866d590db444a2 249 Pfam PF05389 Negative regulator of genetic competence (MecA) 32 242 2.3E-53 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA BAMF_1225 aa24152af98bba028b866d590db444a2 249 PIRSF PIRSF029008 32 249 2.0E-75 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA BAMF_1225 aa24152af98bba028b866d590db444a2 249 Hamap MF_01124 Adapter protein MecA [mecA]. 32 247 27.81 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA BAMF_1225 aa24152af98bba028b866d590db444a2 249 Gene3D G3DSA:3.30.70.1950 152 249 2.8E-33 T 12-10-2018 IPR038471 MecA, C-terminal domain superfamily BAMF_2533 efa96b04da8434cd506be0208a77098d 380 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 376 3.1E-156 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BAMF_2533 efa96b04da8434cd506be0208a77098d 380 Gene3D G3DSA:3.90.1150.10 246 379 1.6E-50 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_2533 efa96b04da8434cd506be0208a77098d 380 PIRSF PIRSF001434 1 380 1.9E-145 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BAMF_2533 efa96b04da8434cd506be0208a77098d 380 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BAMF_2533 efa96b04da8434cd506be0208a77098d 380 SUPERFAMILY SSF53383 12 378 1.48E-119 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_2533 efa96b04da8434cd506be0208a77098d 380 Gene3D G3DSA:3.40.640.10 2 245 3.9E-95 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_0096 4cb81f71e6508ce6ce07bddd318526be 249 Pfam PF00588 SpoU rRNA Methylase family 98 238 5.4E-39 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BAMF_0096 4cb81f71e6508ce6ce07bddd318526be 249 SUPERFAMILY SSF55315 2 78 4.47E-19 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BAMF_0096 4cb81f71e6508ce6ce07bddd318526be 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 244 5.0E-93 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 BAMF_0096 4cb81f71e6508ce6ce07bddd318526be 249 SUPERFAMILY SSF75217 69 245 1.11E-48 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases BAMF_0096 4cb81f71e6508ce6ce07bddd318526be 249 Gene3D G3DSA:3.40.1280.10 77 245 1.8E-57 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BAMF_0096 4cb81f71e6508ce6ce07bddd318526be 249 Gene3D G3DSA:3.30.1330.30 1 76 7.7E-15 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BAMF_0096 4cb81f71e6508ce6ce07bddd318526be 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 81 1.2E-21 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BAMF_0096 4cb81f71e6508ce6ce07bddd318526be 249 SMART SM00967 7 81 3.6E-20 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BAMF_1105 aee098cac76b6b1fdb3157a7231fdc66 353 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BAMF_1105 aee098cac76b6b1fdb3157a7231fdc66 353 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 24 33 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BAMF_1105 aee098cac76b6b1fdb3157a7231fdc66 353 Gene3D G3DSA:3.20.20.210 1 353 4.7E-148 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BAMF_1105 aee098cac76b6b1fdb3157a7231fdc66 353 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 10 342 3.5E-125 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BAMF_1105 aee098cac76b6b1fdb3157a7231fdc66 353 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 8 344 46.306 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BAMF_1105 aee098cac76b6b1fdb3157a7231fdc66 353 SUPERFAMILY SSF51726 7 345 3.14E-100 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BAMF_1105 aee098cac76b6b1fdb3157a7231fdc66 353 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 8 343 1.7E-119 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 SUPERFAMILY SSF54106 166 207 1.96E-8 T 12-10-2018 BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 SUPERFAMILY SSF54106 233 276 2.88E-12 T 12-10-2018 BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 Pfam PF00877 NlpC/P60 family 380 480 6.5E-29 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 Gene3D G3DSA:3.10.350.10 162 215 5.1E-14 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 Gene3D G3DSA:3.10.350.10 88 143 9.8E-19 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 Gene3D G3DSA:3.10.350.10 230 283 8.0E-19 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 Gene3D G3DSA:3.10.350.10 296 350 6.5E-19 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 SUPERFAMILY SSF54106 93 135 3.92E-11 T 12-10-2018 BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 SUPERFAMILY SSF54001 364 482 1.57E-36 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 SUPERFAMILY SSF54106 27 71 2.49E-10 T 12-10-2018 BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 Gene3D G3DSA:3.10.350.10 17 82 5.2E-16 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 Pfam PF01476 LysM domain 167 207 1.0E-11 T 12-10-2018 IPR018392 LysM domain BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 Pfam PF01476 LysM domain 235 276 3.1E-16 T 12-10-2018 IPR018392 LysM domain BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 Pfam PF01476 LysM domain 30 71 1.1E-14 T 12-10-2018 IPR018392 LysM domain BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 Pfam PF01476 LysM domain 94 135 3.6E-14 T 12-10-2018 IPR018392 LysM domain BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 Pfam PF01476 LysM domain 302 343 2.1E-15 T 12-10-2018 IPR018392 LysM domain BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 SMART SM00257 166 209 1.7E-13 T 12-10-2018 IPR018392 LysM domain BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 SMART SM00257 93 136 1.3E-16 T 12-10-2018 IPR018392 LysM domain BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 SMART SM00257 234 277 5.9E-18 T 12-10-2018 IPR018392 LysM domain BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 SMART SM00257 301 344 6.6E-18 T 12-10-2018 IPR018392 LysM domain BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 SMART SM00257 28 71 6.1E-17 T 12-10-2018 IPR018392 LysM domain BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 SUPERFAMILY SSF54106 300 343 2.22E-12 T 12-10-2018 BAMF_1033 561b1cc9496048ac52f3d9c6f4f8071f 483 Gene3D G3DSA:3.90.1720.10 361 483 1.5E-35 T 12-10-2018 BAMF_2928 5e83ff2306d39012de8e0999b8947bf3 429 Gene3D G3DSA:3.10.580.10 195 345 1.2E-53 T 12-10-2018 BAMF_2928 5e83ff2306d39012de8e0999b8947bf3 429 Pfam PF00571 CBS domain 282 335 1.7E-6 T 12-10-2018 IPR000644 CBS domain BAMF_2928 5e83ff2306d39012de8e0999b8947bf3 429 Pfam PF00571 CBS domain 218 272 5.1E-8 T 12-10-2018 IPR000644 CBS domain BAMF_2928 5e83ff2306d39012de8e0999b8947bf3 429 Gene3D G3DSA:3.30.465.10 346 429 1.4E-15 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BAMF_2928 5e83ff2306d39012de8e0999b8947bf3 429 SMART SM01091 351 428 1.5E-20 T 12-10-2018 IPR005170 Transporter-associated domain BAMF_2928 5e83ff2306d39012de8e0999b8947bf3 429 SUPERFAMILY SSF54631 204 338 1.77E-34 T 12-10-2018 BAMF_2928 5e83ff2306d39012de8e0999b8947bf3 429 Pfam PF03471 Transporter associated domain 352 427 1.7E-16 T 12-10-2018 IPR005170 Transporter-associated domain BAMF_2928 5e83ff2306d39012de8e0999b8947bf3 429 Pfam PF01595 Domain of unknown function DUF21 7 201 1.5E-46 T 12-10-2018 IPR002550 CNNM, transmembrane domain BAMF_2928 5e83ff2306d39012de8e0999b8947bf3 429 SUPERFAMILY SSF56176 349 427 7.63E-16 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BAMF_2928 5e83ff2306d39012de8e0999b8947bf3 429 SMART SM00116 225 274 12.0 T 12-10-2018 IPR000644 CBS domain BAMF_2928 5e83ff2306d39012de8e0999b8947bf3 429 SMART SM00116 287 335 1.9 T 12-10-2018 IPR000644 CBS domain BAMF_3476 dd49c76d631a48bed9047ba505df3ffe 113 Gene3D G3DSA:2.40.50.140 1 112 7.0E-44 T 12-10-2018 BAMF_3476 dd49c76d631a48bed9047ba505df3ffe 113 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 31.581 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BAMF_3476 dd49c76d631a48bed9047ba505df3ffe 113 SUPERFAMILY SSF50249 2 108 1.75E-39 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_3476 dd49c76d631a48bed9047ba505df3ffe 113 PIRSF PIRSF002070 2 112 7.3E-30 T 12-10-2018 BAMF_3476 dd49c76d631a48bed9047ba505df3ffe 113 Pfam PF00436 Single-strand binding protein family 2 103 8.8E-33 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 BAMF_3476 dd49c76d631a48bed9047ba505df3ffe 113 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 108 3.0E-34 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BAMF_1803 6ea120e8ab8b2a7d35b27d29bd8fa1bf 73 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 2 64 29.964 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BAMF_1803 6ea120e8ab8b2a7d35b27d29bd8fa1bf 73 SUPERFAMILY SSF50182 5 63 3.89E-24 T 12-10-2018 IPR010920 LSM domain superfamily BAMF_1803 6ea120e8ab8b2a7d35b27d29bd8fa1bf 73 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 5.8E-32 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BAMF_1803 6ea120e8ab8b2a7d35b27d29bd8fa1bf 73 Gene3D G3DSA:2.30.30.100 1 73 1.7E-35 T 12-10-2018 BAMF_1803 6ea120e8ab8b2a7d35b27d29bd8fa1bf 73 Pfam PF17209 Hfq protein 6 68 4.3E-33 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BAMF_2931 6ca81b3dd2f776c8c9e769f67091ed93 84 Pfam PF11458 Membrane-integrating protein Mistic 1 81 2.0E-44 T 12-10-2018 IPR021078 Membrane-integrating protein Mistic BAMF_2931 6ca81b3dd2f776c8c9e769f67091ed93 84 Gene3D G3DSA:1.10.220.90 1 75 3.2E-35 T 12-10-2018 IPR038193 Mistic superfamily BAMF_2570 818a5c4353c2ae62a39f861564174245 734 Gene3D G3DSA:3.30.460.10 198 329 1.5E-53 T 12-10-2018 BAMF_2570 818a5c4353c2ae62a39f861564174245 734 Gene3D G3DSA:3.10.20.30 387 459 9.9E-32 T 12-10-2018 IPR012675 Beta-grasp domain superfamily BAMF_2570 818a5c4353c2ae62a39f861564174245 734 Pfam PF13291 ACT domain 655 731 4.6E-20 T 12-10-2018 IPR002912 ACT domain BAMF_2570 818a5c4353c2ae62a39f861564174245 734 Pfam PF02824 TGS domain 394 453 1.8E-23 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BAMF_2570 818a5c4353c2ae62a39f861564174245 734 SMART SM00954 240 350 3.0E-70 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 BAMF_2570 818a5c4353c2ae62a39f861564174245 734 Gene3D G3DSA:3.30.70.260 655 734 4.5E-17 T 12-10-2018 BAMF_2570 818a5c4353c2ae62a39f861564174245 734 Gene3D G3DSA:1.10.3210.10 1 196 8.1E-88 T 12-10-2018 BAMF_2570 818a5c4353c2ae62a39f861564174245 734 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 731 5.0E-259 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 BAMF_2570 818a5c4353c2ae62a39f861564174245 734 SUPERFAMILY SSF109604 10 196 4.39E-76 T 12-10-2018 BAMF_2570 818a5c4353c2ae62a39f861564174245 734 SUPERFAMILY SSF81271 381 454 8.72E-23 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BAMF_2570 818a5c4353c2ae62a39f861564174245 734 SMART SM00471 46 158 3.0E-8 T 12-10-2018 IPR003607 HD/PDEase domain BAMF_2570 818a5c4353c2ae62a39f861564174245 734 SUPERFAMILY SSF81301 185 398 7.19E-67 T 12-10-2018 BAMF_2570 818a5c4353c2ae62a39f861564174245 734 Pfam PF13328 HD domain 31 180 1.6E-50 T 12-10-2018 IPR003607 HD/PDEase domain BAMF_2570 818a5c4353c2ae62a39f861564174245 734 SUPERFAMILY SSF55021 657 734 4.08E-12 T 12-10-2018 BAMF_2570 818a5c4353c2ae62a39f861564174245 734 Pfam PF04607 Region found in RelA / SpoT proteins 240 350 3.2E-39 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 SUPERFAMILY SSF101904 500 817 3.79E-114 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 Gene3D G3DSA:2.120.10.90 497 807 1.0E-126 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 SUPERFAMILY SSF56719 31 488 1.7E-183 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 SMART SM00434 12 465 8.5E-298 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 551 4.8E-15 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 760 806 8.8E-10 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 604 7.0E-11 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 660 705 2.2E-14 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 710 754 4.4E-13 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 612 655 2.9E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 472 1.6E-162 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 Gene3D G3DSA:3.90.199.10 33 486 7.3E-222 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 Gene3D G3DSA:3.30.1360.40 237 333 7.3E-222 T 12-10-2018 BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 808 25.234 T 12-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 Gene3D G3DSA:1.10.268.10 370 459 7.3E-222 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BAMF_0007 e2863111804ea58fb6996a968eca43a3 819 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 807 0.0 T 12-10-2018 BAMF_2875 418aaa1d6a78ab2e73a738a0840d3ab2 222 Gene3D G3DSA:3.30.70.1450 142 222 1.0E-25 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BAMF_2875 418aaa1d6a78ab2e73a738a0840d3ab2 222 SUPERFAMILY SSF116726 137 218 1.1E-16 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BAMF_2875 418aaa1d6a78ab2e73a738a0840d3ab2 222 SUPERFAMILY SSF51735 7 133 4.6E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2875 418aaa1d6a78ab2e73a738a0840d3ab2 222 Pfam PF02254 TrkA-N domain 9 124 7.0E-27 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BAMF_2875 418aaa1d6a78ab2e73a738a0840d3ab2 222 Gene3D G3DSA:3.40.50.720 1 141 1.4E-37 T 12-10-2018 BAMF_2875 418aaa1d6a78ab2e73a738a0840d3ab2 222 Pfam PF02080 TrkA-C domain 154 218 2.9E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BAMF_0116 c57b126ac4154369d53b6398ff984cf8 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 206 39.298 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0116 c57b126ac4154369d53b6398ff984cf8 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site BAMF_0116 c57b126ac4154369d53b6398ff984cf8 209 Gene3D G3DSA:2.40.30.10 131 209 3.0E-17 T 12-10-2018 BAMF_0116 c57b126ac4154369d53b6398ff984cf8 209 Pfam PF00297 Ribosomal protein L3 99 181 1.4E-16 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0116 c57b126ac4154369d53b6398ff984cf8 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 203 1.5E-86 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0116 c57b126ac4154369d53b6398ff984cf8 209 Gene3D G3DSA:2.40.50.620 33 96 4.8E-15 T 12-10-2018 BAMF_0116 c57b126ac4154369d53b6398ff984cf8 209 SUPERFAMILY SSF50447 1 207 5.3E-81 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BAMF_1015 5981611c894ce9fe46ddf1a55a75c148 687 SUPERFAMILY SSF56300 51 367 5.06E-71 T 12-10-2018 BAMF_1015 5981611c894ce9fe46ddf1a55a75c148 687 ProSitePatterns PS00786 5'-nucleotidase signature 2. 140 151 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_1015 5981611c894ce9fe46ddf1a55a75c148 687 Gene3D G3DSA:3.90.780.10 370 552 8.2E-42 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_1015 5981611c894ce9fe46ddf1a55a75c148 687 Gene3D G3DSA:3.60.21.10 55 368 2.1E-78 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BAMF_1015 5981611c894ce9fe46ddf1a55a75c148 687 Pfam PF00149 Calcineurin-like phosphoesterase 57 295 5.9E-11 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BAMF_1015 5981611c894ce9fe46ddf1a55a75c148 687 SUPERFAMILY SSF55816 366 553 2.09E-42 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_1015 5981611c894ce9fe46ddf1a55a75c148 687 Pfam PF02872 5'-nucleotidase, C-terminal domain 369 508 2.0E-31 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_1015 5981611c894ce9fe46ddf1a55a75c148 687 PRINTS PR01607 Apyrase family signature 278 301 4.1E-24 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_1015 5981611c894ce9fe46ddf1a55a75c148 687 PRINTS PR01607 Apyrase family signature 55 73 4.1E-24 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_1015 5981611c894ce9fe46ddf1a55a75c148 687 PRINTS PR01607 Apyrase family signature 304 324 4.1E-24 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_1015 5981611c894ce9fe46ddf1a55a75c148 687 PRINTS PR01607 Apyrase family signature 421 444 4.1E-24 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_1015 5981611c894ce9fe46ddf1a55a75c148 687 PRINTS PR01607 Apyrase family signature 489 508 4.1E-24 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_1015 5981611c894ce9fe46ddf1a55a75c148 687 PRINTS PR01607 Apyrase family signature 250 267 4.1E-24 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_3614 e37251912aef63f02eaf7853d5b924ae 428 Gene3D G3DSA:1.10.8.1210 382 428 1.1E-15 T 12-10-2018 BAMF_3614 e37251912aef63f02eaf7853d5b924ae 428 SUPERFAMILY SSF51735 195 427 1.84E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3614 e37251912aef63f02eaf7853d5b924ae 428 SUPERFAMILY SSF53223 18 197 1.25E-67 T 12-10-2018 BAMF_3614 e37251912aef63f02eaf7853d5b924ae 428 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 114 127 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_3614 e37251912aef63f02eaf7853d5b924ae 428 PIRSF PIRSF000185 11 428 3.8E-167 T 12-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 BAMF_3614 e37251912aef63f02eaf7853d5b924ae 428 Gene3D G3DSA:3.40.50.10860 47 182 8.9E-182 T 12-10-2018 BAMF_3614 e37251912aef63f02eaf7853d5b924ae 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 106 120 1.3E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_3614 e37251912aef63f02eaf7853d5b924ae 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 186 208 1.3E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_3614 e37251912aef63f02eaf7853d5b924ae 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 228 248 1.3E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_3614 e37251912aef63f02eaf7853d5b924ae 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 354 365 1.3E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_3614 e37251912aef63f02eaf7853d5b924ae 428 Gene3D G3DSA:3.40.50.720 202 355 8.9E-182 T 12-10-2018 BAMF_3614 e37251912aef63f02eaf7853d5b924ae 428 SMART SM00839 197 426 4.4E-93 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_3614 e37251912aef63f02eaf7853d5b924ae 428 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 195 426 8.8E-75 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_3614 e37251912aef63f02eaf7853d5b924ae 428 Gene3D G3DSA:1.10.8.1210 23 356 8.9E-182 T 12-10-2018 BAMF_3614 e37251912aef63f02eaf7853d5b924ae 428 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 49 177 3.8E-55 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_3598 947644493e80fd7d06055be1d0f21d55 323 SUPERFAMILY SSF53659 5 322 8.22E-95 T 12-10-2018 BAMF_3598 947644493e80fd7d06055be1d0f21d55 323 Gene3D G3DSA:3.40.50.10750 142 295 9.8E-137 T 12-10-2018 BAMF_3598 947644493e80fd7d06055be1d0f21d55 323 Gene3D G3DSA:3.40.50.10950 18 319 9.8E-137 T 12-10-2018 BAMF_3598 947644493e80fd7d06055be1d0f21d55 323 PIRSF PIRSF000428 1 323 8.7E-112 T 12-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BAMF_3598 947644493e80fd7d06055be1d0f21d55 323 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 19 319 1.5E-134 T 12-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BAMF_3598 947644493e80fd7d06055be1d0f21d55 323 Pfam PF01515 Phosphate acetyl/butaryl transferase 5 319 5.1E-132 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BAMF_1746 5fc2a5870575b8dedbd59589ed51f7a1 196 PIRSF PIRSF001390 1 196 8.6E-75 T 12-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B BAMF_1746 5fc2a5870575b8dedbd59589ed51f7a1 196 Gene3D G3DSA:3.40.50.1950 1 196 5.5E-57 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BAMF_1746 5fc2a5870575b8dedbd59589ed51f7a1 196 Pfam PF02441 Flavoprotein 6 164 2.1E-18 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BAMF_1746 5fc2a5870575b8dedbd59589ed51f7a1 196 TIGRFAM TIGR02852 spore_dpaB: dipicolinic acid synthetase, B subunit 6 192 6.2E-100 T 12-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B BAMF_1746 5fc2a5870575b8dedbd59589ed51f7a1 196 SUPERFAMILY SSF52507 6 192 9.03E-30 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BAMF_3047 c5c6d0dea0e9be27000b18b77da2800a 417 SUPERFAMILY SSF53383 10 391 2.45E-96 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_3047 c5c6d0dea0e9be27000b18b77da2800a 417 Pfam PF00266 Aminotransferase class-V 35 355 1.8E-33 T 12-10-2018 IPR000192 Aminotransferase class V domain BAMF_3047 c5c6d0dea0e9be27000b18b77da2800a 417 PIRSF PIRSF000524 5 413 1.0E-141 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 BAMF_3047 c5c6d0dea0e9be27000b18b77da2800a 417 Gene3D G3DSA:3.90.1150.10 9 384 4.5E-146 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_3047 c5c6d0dea0e9be27000b18b77da2800a 417 Gene3D G3DSA:3.40.640.10 23 286 4.5E-146 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_3047 c5c6d0dea0e9be27000b18b77da2800a 417 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BAMF_3788 5239761a626e92189801b1ee0c912c15 487 Gene3D G3DSA:3.40.309.10 252 450 2.1E-165 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BAMF_3788 5239761a626e92189801b1ee0c912c15 487 Pfam PF00171 Aldehyde dehydrogenase family 15 477 9.9E-157 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BAMF_3788 5239761a626e92189801b1ee0c912c15 487 SUPERFAMILY SSF53720 4 482 3.01E-152 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BAMF_3788 5239761a626e92189801b1ee0c912c15 487 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 8 481 4.0E-184 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 BAMF_3788 5239761a626e92189801b1ee0c912c15 487 Hamap MF_01670 Malonate-semialdehyde dehydrogenase [iolA]. 1 481 73.247 T 12-10-2018 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642 BAMF_3788 5239761a626e92189801b1ee0c912c15 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BAMF_3788 5239761a626e92189801b1ee0c912c15 487 Gene3D G3DSA:3.40.605.10 22 458 2.1E-165 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BAMF_3372 72ea0ba6468f36e245107120ab84d671 187 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 127 182 7.0E-30 T 12-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal BAMF_3372 72ea0ba6468f36e245107120ab84d671 187 Gene3D G3DSA:3.30.505.50 140 186 4.4E-27 T 12-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily BAMF_3372 72ea0ba6468f36e245107120ab84d671 187 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 95 8.1E-29 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BAMF_3372 72ea0ba6468f36e245107120ab84d671 187 Gene3D G3DSA:3.30.160.100 1 110 4.7E-30 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like BAMF_3372 72ea0ba6468f36e245107120ab84d671 187 SUPERFAMILY SSF69754 2 109 2.75E-32 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like BAMF_3372 72ea0ba6468f36e245107120ab84d671 187 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 186 25.16 T 12-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid BAMF_3372 72ea0ba6468f36e245107120ab84d671 187 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 4.5E-37 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BAMF_2922 8b4331599316bb68aaeec0489cdffaf4 662 SMART SM00319 33 151 1.2E-11 T 12-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 BAMF_2922 8b4331599316bb68aaeec0489cdffaf4 662 SMART SM00304 303 355 3.2E-18 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_2922 8b4331599316bb68aaeec0489cdffaf4 662 Pfam PF00672 HAMP domain 303 351 1.6E-15 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_2922 8b4331599316bb68aaeec0489cdffaf4 662 Gene3D G3DSA:1.10.287.950 353 659 7.2E-71 T 12-10-2018 BAMF_2922 8b4331599316bb68aaeec0489cdffaf4 662 Pfam PF02743 Cache domain 42 263 1.1E-25 T 12-10-2018 IPR033479 Double Cache domain 1 BAMF_2922 8b4331599316bb68aaeec0489cdffaf4 662 SMART SM00283 384 659 2.4E-97 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_2922 8b4331599316bb68aaeec0489cdffaf4 662 Gene3D G3DSA:3.30.450.20 78 183 4.9E-31 T 12-10-2018 BAMF_2922 8b4331599316bb68aaeec0489cdffaf4 662 SUPERFAMILY SSF58104 323 659 1.19E-71 T 12-10-2018 BAMF_2922 8b4331599316bb68aaeec0489cdffaf4 662 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 612 7.9E-55 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_2922 8b4331599316bb68aaeec0489cdffaf4 662 Gene3D G3DSA:3.30.450.20 184 268 4.9E-31 T 12-10-2018 BAMF_2922 8b4331599316bb68aaeec0489cdffaf4 662 Gene3D G3DSA:1.10.8.500 303 352 4.4E-12 T 12-10-2018 BAMF_2922 8b4331599316bb68aaeec0489cdffaf4 662 SUPERFAMILY SSF103190 106 192 1.73E-10 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BAMF_2312 057b1988d93581df8fb931c2609919ac 377 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 214 8.1E-27 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BAMF_2312 057b1988d93581df8fb931c2609919ac 377 Gene3D G3DSA:1.10.540.10 1 118 5.5E-44 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BAMF_2312 057b1988d93581df8fb931c2609919ac 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 2.7E-38 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BAMF_2312 057b1988d93581df8fb931c2609919ac 377 PIRSF PIRSF016578 3 368 3.7E-19 T 12-10-2018 BAMF_2312 057b1988d93581df8fb931c2609919ac 377 SUPERFAMILY SSF56645 2 238 7.59E-87 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BAMF_2312 057b1988d93581df8fb931c2609919ac 377 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BAMF_2312 057b1988d93581df8fb931c2609919ac 377 Gene3D G3DSA:2.40.110.10 119 232 5.7E-44 T 12-10-2018 BAMF_2312 057b1988d93581df8fb931c2609919ac 377 Gene3D G3DSA:1.20.140.10 233 377 4.6E-56 T 12-10-2018 BAMF_2312 057b1988d93581df8fb931c2609919ac 377 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BAMF_2312 057b1988d93581df8fb931c2609919ac 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 8.7E-53 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BAMF_2312 057b1988d93581df8fb931c2609919ac 377 SUPERFAMILY SSF47203 225 376 5.8E-60 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BAMF_2451 305680d5972f25b49603dfae9cf9cb53 368 PIRSF PIRSF019549 4 368 1.6E-184 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 BAMF_2451 305680d5972f25b49603dfae9cf9cb53 368 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 10 368 0.0 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 BAMF_2451 305680d5972f25b49603dfae9cf9cb53 368 Pfam PF03418 Germination protease 18 367 9.7E-188 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 BAMF_2451 305680d5972f25b49603dfae9cf9cb53 368 Hamap MF_00626 Germination protease [gpr]. 1 368 161.922 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 BAMF_2451 305680d5972f25b49603dfae9cf9cb53 368 TIGRFAM TIGR01441 GPR: GPR endopeptidase 12 368 3.1E-196 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 BAMF_2451 305680d5972f25b49603dfae9cf9cb53 368 SUPERFAMILY SSF53163 5 367 1.33E-128 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily BAMF_0954 f89e87a867d7332eb58cca79dc7b3867 474 Gene3D G3DSA:4.10.80.30 57 82 2.9E-48 T 12-10-2018 BAMF_0954 f89e87a867d7332eb58cca79dc7b3867 474 SMART SM00047 2 153 1.5E-45 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BAMF_0954 f89e87a867d7332eb58cca79dc7b3867 474 Pfam PF05709 Phage tail protein 225 472 4.3E-42 T 12-10-2018 IPR008841 Siphovirus-type tail component BAMF_0954 f89e87a867d7332eb58cca79dc7b3867 474 PRINTS PR01002 Flagellar protein FlgJ signature 130 148 1.0E-5 T 12-10-2018 BAMF_0954 f89e87a867d7332eb58cca79dc7b3867 474 PRINTS PR01002 Flagellar protein FlgJ signature 25 43 1.0E-5 T 12-10-2018 BAMF_0954 f89e87a867d7332eb58cca79dc7b3867 474 PRINTS PR01002 Flagellar protein FlgJ signature 110 129 1.0E-5 T 12-10-2018 BAMF_0954 f89e87a867d7332eb58cca79dc7b3867 474 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 12 149 8.8E-21 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BAMF_0954 f89e87a867d7332eb58cca79dc7b3867 474 Gene3D G3DSA:1.10.530.10 6 153 2.9E-48 T 12-10-2018 BAMF_2496 798981fd4ca67f0aa1d149d67747d576 283 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BAMF_2496 798981fd4ca67f0aa1d149d67747d576 283 PRINTS PR00069 Aldo-keto reductase signature 35 59 4.3E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2496 798981fd4ca67f0aa1d149d67747d576 283 PRINTS PR00069 Aldo-keto reductase signature 120 137 4.3E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2496 798981fd4ca67f0aa1d149d67747d576 283 PRINTS PR00069 Aldo-keto reductase signature 193 217 4.3E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2496 798981fd4ca67f0aa1d149d67747d576 283 PRINTS PR00069 Aldo-keto reductase signature 91 109 4.3E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2496 798981fd4ca67f0aa1d149d67747d576 283 PRINTS PR00069 Aldo-keto reductase signature 154 183 4.3E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2496 798981fd4ca67f0aa1d149d67747d576 283 Pfam PF00248 Aldo/keto reductase family 17 257 3.8E-47 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain BAMF_2496 798981fd4ca67f0aa1d149d67747d576 283 PIRSF PIRSF000097 111 267 1.6E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2496 798981fd4ca67f0aa1d149d67747d576 283 PIRSF PIRSF000097 1 115 4.7E-41 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2496 798981fd4ca67f0aa1d149d67747d576 283 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BAMF_2496 798981fd4ca67f0aa1d149d67747d576 283 SUPERFAMILY SSF51430 2 263 2.1E-90 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_2496 798981fd4ca67f0aa1d149d67747d576 283 Gene3D G3DSA:3.20.20.100 1 283 4.7E-121 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_1781 0f76a696bd5235ebcaedda468e6477bd 746 Gene3D G3DSA:3.30.70.250 118 186 3.0E-97 T 12-10-2018 BAMF_1781 0f76a696bd5235ebcaedda468e6477bd 746 TIGRFAM TIGR02814 pfaD_fam: PfaD family protein 299 737 2.3E-208 T 12-10-2018 IPR014179 PfaD family protein KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BAMF_1781 0f76a696bd5235ebcaedda468e6477bd 746 SUPERFAMILY SSF51412 312 597 1.65E-23 T 12-10-2018 BAMF_1781 0f76a696bd5235ebcaedda468e6477bd 746 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 280 2.8E-112 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BAMF_1781 0f76a696bd5235ebcaedda468e6477bd 746 Pfam PF00698 Acyl transferase domain 4 287 5.1E-34 T 12-10-2018 IPR014043 Acyl transferase BAMF_1781 0f76a696bd5235ebcaedda468e6477bd 746 SUPERFAMILY SSF52151 3 282 3.4E-60 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BAMF_1781 0f76a696bd5235ebcaedda468e6477bd 746 Gene3D G3DSA:3.20.20.70 307 657 3.3E-46 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_1781 0f76a696bd5235ebcaedda468e6477bd 746 Gene3D G3DSA:3.40.366.10 4 271 3.0E-97 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 BAMF_1781 0f76a696bd5235ebcaedda468e6477bd 746 SUPERFAMILY SSF55048 119 187 1.31E-13 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BAMF_1781 0f76a696bd5235ebcaedda468e6477bd 746 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 307 6.6E-37 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain BAMF_2169 655b629d212739335f291fe7492db1fa 515 PRINTS PR00095 Anthranilate synthase component I signature 332 345 4.0E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_2169 655b629d212739335f291fe7492db1fa 515 PRINTS PR00095 Anthranilate synthase component I signature 441 455 4.0E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_2169 655b629d212739335f291fe7492db1fa 515 PRINTS PR00095 Anthranilate synthase component I signature 426 440 4.0E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_2169 655b629d212739335f291fe7492db1fa 515 PRINTS PR00095 Anthranilate synthase component I signature 346 359 4.0E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_2169 655b629d212739335f291fe7492db1fa 515 Pfam PF00425 chorismate binding enzyme 231 484 3.5E-93 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BAMF_2169 655b629d212739335f291fe7492db1fa 515 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 29 492 1.9E-181 T 12-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_2169 655b629d212739335f291fe7492db1fa 515 SUPERFAMILY SSF56322 18 497 2.09E-145 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BAMF_2169 655b629d212739335f291fe7492db1fa 515 Gene3D G3DSA:3.60.120.10 1 502 8.6E-163 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BAMF_2169 655b629d212739335f291fe7492db1fa 515 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 167 1.8E-27 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 SUPERFAMILY SSF49401 546 691 7.95E-21 T 12-10-2018 IPR008966 Adhesion domain superfamily BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 SUPERFAMILY SSF49478 1711 1765 1.61E-5 T 12-10-2018 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Pfam PF00746 LPXTG cell wall anchor motif 1927 1966 3.6E-5 T 12-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 SUPERFAMILY SSF49478 1334 1396 8.63E-6 T 12-10-2018 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 SUPERFAMILY SSF49478 1428 1493 1.06E-6 T 12-10-2018 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 SUPERFAMILY SSF49401 692 814 1.86E-18 T 12-10-2018 IPR008966 Adhesion domain superfamily BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1932 1966 3.8E-6 T 12-10-2018 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 SUPERFAMILY SSF49478 1234 1304 6.28E-6 T 12-10-2018 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 SUPERFAMILY SSF49401 51 189 8.7E-10 T 12-10-2018 IPR008966 Adhesion domain superfamily BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 SUPERFAMILY SSF49401 828 966 3.35E-23 T 12-10-2018 IPR008966 Adhesion domain superfamily BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 SUPERFAMILY SSF49478 1143 1202 9.02E-8 T 12-10-2018 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 SUPERFAMILY SSF49478 1522 1587 1.14E-6 T 12-10-2018 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Pfam PF05737 Collagen binding domain 696 806 3.1E-6 T 12-10-2018 IPR008456 Collagen binding domain GO:0005518 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Pfam PF05737 Collagen binding domain 557 676 8.3E-10 T 12-10-2018 IPR008456 Collagen binding domain GO:0005518 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Pfam PF05737 Collagen binding domain 981 1112 3.0E-12 T 12-10-2018 IPR008456 Collagen binding domain GO:0005518 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Pfam PF05737 Collagen binding domain 829 955 1.8E-15 T 12-10-2018 IPR008456 Collagen binding domain GO:0005518 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Pfam PF05737 Collagen binding domain 411 535 2.3E-17 T 12-10-2018 IPR008456 Collagen binding domain GO:0005518 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 SUPERFAMILY SSF49401 972 1116 9.19E-21 T 12-10-2018 IPR008966 Adhesion domain superfamily BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 SUPERFAMILY SSF49478 1613 1680 1.41E-6 T 12-10-2018 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Gene3D G3DSA:2.60.40.1280 254 409 7.1E-21 T 12-10-2018 IPR011252 Fibrogen-binding domain 1 GO:0007155 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Gene3D G3DSA:2.60.40.1280 39 196 2.4E-8 T 12-10-2018 IPR011252 Fibrogen-binding domain 1 GO:0007155 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 SUPERFAMILY SSF49478 1802 1879 1.61E-7 T 12-10-2018 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Gene3D G3DSA:2.60.40.740 691 817 2.4E-6 T 12-10-2018 BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 SUPERFAMILY SSF49401 411 544 5.22E-19 T 12-10-2018 IPR008966 Adhesion domain superfamily BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 SUPERFAMILY SSF49401 264 407 1.74E-24 T 12-10-2018 IPR008966 Adhesion domain superfamily BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Gene3D G3DSA:2.60.40.10 1606 1699 1.8E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Gene3D G3DSA:2.60.40.10 1418 1511 2.3E-28 T 12-10-2018 IPR013783 Immunoglobulin-like fold BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Gene3D G3DSA:2.60.40.10 1129 1220 2.3E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Gene3D G3DSA:2.60.40.10 1512 1605 2.3E-28 T 12-10-2018 IPR013783 Immunoglobulin-like fold BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Gene3D G3DSA:2.60.40.10 1790 1902 3.5E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Gene3D G3DSA:2.60.40.10 1225 1324 1.9E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Gene3D G3DSA:2.60.40.10 1325 1417 3.7E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold BAMF_0724 606c83ee100a0c06b53c2d53a89347a2 1970 Gene3D G3DSA:2.60.40.10 1700 1789 1.2E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold BAMF_2207 dc93fc04d7fca7feeee2a69304a4cea7 525 SUPERFAMILY SSF52283 14 126 2.65E-33 T 12-10-2018 BAMF_2207 dc93fc04d7fca7feeee2a69304a4cea7 525 SUPERFAMILY SSF51735 95 279 3.36E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2207 dc93fc04d7fca7feeee2a69304a4cea7 525 Gene3D G3DSA:3.40.50.720 91 280 4.4E-114 T 12-10-2018 BAMF_2207 dc93fc04d7fca7feeee2a69304a4cea7 525 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 218 234 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BAMF_2207 dc93fc04d7fca7feeee2a69304a4cea7 525 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 310 3.0E-34 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BAMF_2207 dc93fc04d7fca7feeee2a69304a4cea7 525 Gene3D G3DSA:3.30.70.260 451 525 2.8E-21 T 12-10-2018 BAMF_2207 dc93fc04d7fca7feeee2a69304a4cea7 525 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 189 211 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BAMF_2207 dc93fc04d7fca7feeee2a69304a4cea7 525 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 278 5.0E-61 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BAMF_2207 dc93fc04d7fca7feeee2a69304a4cea7 525 Gene3D G3DSA:3.40.50.720 4 289 4.4E-114 T 12-10-2018 BAMF_2207 dc93fc04d7fca7feeee2a69304a4cea7 525 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 524 8.8E-225 T 12-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 BAMF_2207 dc93fc04d7fca7feeee2a69304a4cea7 525 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 141 168 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BAMF_2207 dc93fc04d7fca7feeee2a69304a4cea7 525 Pfam PF01842 ACT domain 452 513 1.8E-9 T 12-10-2018 IPR002912 ACT domain BAMF_2207 dc93fc04d7fca7feeee2a69304a4cea7 525 SUPERFAMILY SSF143548 316 446 7.85E-34 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BAMF_2207 dc93fc04d7fca7feeee2a69304a4cea7 525 Gene3D G3DSA:3.30.1330.90 317 450 3.7E-34 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BAMF_2207 dc93fc04d7fca7feeee2a69304a4cea7 525 SUPERFAMILY SSF55021 440 522 2.08E-18 T 12-10-2018 BAMF_2592 87a3864207cdf03c8db13ab6e109ab8a 282 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 10 274 1.2E-97 T 12-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 BAMF_2592 87a3864207cdf03c8db13ab6e109ab8a 282 SUPERFAMILY SSF54675 5 107 1.69E-27 T 12-10-2018 BAMF_2592 87a3864207cdf03c8db13ab6e109ab8a 282 SUPERFAMILY SSF51690 108 274 2.0E-57 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BAMF_2592 87a3864207cdf03c8db13ab6e109ab8a 282 Gene3D G3DSA:3.90.1170.20 13 272 5.1E-100 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 BAMF_2592 87a3864207cdf03c8db13ab6e109ab8a 282 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 106 5.4E-26 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 BAMF_2592 87a3864207cdf03c8db13ab6e109ab8a 282 Gene3D G3DSA:3.20.20.70 122 264 5.1E-100 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_2592 87a3864207cdf03c8db13ab6e109ab8a 282 PIRSF PIRSF006250 1 277 7.6E-100 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 BAMF_2592 87a3864207cdf03c8db13ab6e109ab8a 282 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 108 273 2.8E-59 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 BAMF_0401 1ecca4d0d1b680b3e47133379b7ecca3 145 SUPERFAMILY SSF55729 1 134 3.55E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_0401 1ecca4d0d1b680b3e47133379b7ecca3 145 Pfam PF00583 Acetyltransferase (GNAT) family 24 134 1.4E-15 T 12-10-2018 IPR000182 GNAT domain BAMF_0401 1ecca4d0d1b680b3e47133379b7ecca3 145 Gene3D G3DSA:3.40.630.30 2 137 3.8E-32 T 12-10-2018 BAMF_1398 f18787ddb2e0dd44dcb65c9265aa622f 141 SUPERFAMILY SSF82784 5 137 6.28E-34 T 12-10-2018 IPR036102 OsmC/Ohr superfamily BAMF_1398 f18787ddb2e0dd44dcb65c9265aa622f 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 5 137 6.9E-49 T 12-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 BAMF_1398 f18787ddb2e0dd44dcb65c9265aa622f 141 Gene3D G3DSA:2.20.25.10 4 41 5.5E-13 T 12-10-2018 BAMF_1398 f18787ddb2e0dd44dcb65c9265aa622f 141 Pfam PF02566 OsmC-like protein 44 136 1.4E-18 T 12-10-2018 IPR003718 OsmC/Ohr family BAMF_1398 f18787ddb2e0dd44dcb65c9265aa622f 141 Gene3D G3DSA:3.30.300.20 47 138 2.2E-32 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BAMF_1758 289c2f307a8abd7cb40575c23628d32d 426 SUPERFAMILY SSF63411 246 414 7.83E-32 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BAMF_1758 289c2f307a8abd7cb40575c23628d32d 426 Gene3D G3DSA:3.30.830.10 6 234 2.0E-62 T 12-10-2018 BAMF_1758 289c2f307a8abd7cb40575c23628d32d 426 Gene3D G3DSA:3.30.830.10 240 424 6.5E-44 T 12-10-2018 BAMF_1758 289c2f307a8abd7cb40575c23628d32d 426 Pfam PF05193 Peptidase M16 inactive domain 185 357 1.2E-26 T 12-10-2018 IPR007863 Peptidase M16, C-terminal BAMF_1758 289c2f307a8abd7cb40575c23628d32d 426 SUPERFAMILY SSF63411 26 231 1.91E-25 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BAMF_2518 b2b05b4470f7b85767d2f178f7d04184 305 Gene3D G3DSA:3.60.15.10 25 305 2.8E-86 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_2518 b2b05b4470f7b85767d2f178f7d04184 305 PIRSF PIRSF038896 2 305 2.2E-96 T 12-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 BAMF_2518 b2b05b4470f7b85767d2f178f7d04184 305 SUPERFAMILY SSF56281 57 268 3.01E-39 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_2518 b2b05b4470f7b85767d2f178f7d04184 305 Pfam PF12706 Beta-lactamase superfamily domain 74 263 6.3E-44 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_2518 b2b05b4470f7b85767d2f178f7d04184 305 SMART SM00849 62 262 0.0031 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_1400 e766a67bd660787eb39a67e3597170c9 136 Gene3D G3DSA:2.20.25.10 1 42 3.6E-22 T 12-10-2018 BAMF_1400 e766a67bd660787eb39a67e3597170c9 136 SUPERFAMILY SSF82784 3 135 1.01E-38 T 12-10-2018 IPR036102 OsmC/Ohr superfamily BAMF_1400 e766a67bd660787eb39a67e3597170c9 136 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 3 134 1.9E-50 T 12-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 BAMF_1400 e766a67bd660787eb39a67e3597170c9 136 Gene3D G3DSA:3.30.300.20 43 136 3.5E-33 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BAMF_1400 e766a67bd660787eb39a67e3597170c9 136 Pfam PF02566 OsmC-like protein 39 134 1.2E-19 T 12-10-2018 IPR003718 OsmC/Ohr family BAMF_3332 f060a708bcc7f44c154e6ec141df250f 206 Gene3D G3DSA:1.10.287.1080 112 204 4.6E-34 T 12-10-2018 BAMF_3332 f060a708bcc7f44c154e6ec141df250f 206 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 102 5.8E-34 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BAMF_3332 f060a708bcc7f44c154e6ec141df250f 206 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 5 203 38.085 T 12-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 BAMF_3332 f060a708bcc7f44c154e6ec141df250f 206 Gene3D G3DSA:3.10.20.400 1 93 8.4E-40 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 BAMF_3332 f060a708bcc7f44c154e6ec141df250f 206 SUPERFAMILY SSF141734 4 104 8.89E-46 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 BAMF_3332 f060a708bcc7f44c154e6ec141df250f 206 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 52 101 6.0E-21 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BAMF_3332 f060a708bcc7f44c154e6ec141df250f 206 SUPERFAMILY SSF101386 114 202 5.23E-28 T 12-10-2018 BAMF_3332 f060a708bcc7f44c154e6ec141df250f 206 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 3 106 28.473 T 12-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BAMF_3332 f060a708bcc7f44c154e6ec141df250f 206 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 115 202 8.0E-19 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 BAMF_3332 f060a708bcc7f44c154e6ec141df250f 206 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 20.884 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 BAMF_3332 f060a708bcc7f44c154e6ec141df250f 206 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 198 2.1E-32 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 BAMF_2446 d126880258d207b00dcdd352770ebaa1 343 Gene3D G3DSA:1.10.10.10 1 85 2.4E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2446 d126880258d207b00dcdd352770ebaa1 343 Gene3D G3DSA:3.30.450.40 104 337 1.1E-60 T 12-10-2018 IPR029016 GAF-like domain superfamily BAMF_2446 d126880258d207b00dcdd352770ebaa1 343 Gene3D G3DSA:3.30.390.60 128 230 1.1E-60 T 12-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily BAMF_2446 d126880258d207b00dcdd352770ebaa1 343 SUPERFAMILY SSF46785 1 84 5.57E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2446 d126880258d207b00dcdd352770ebaa1 343 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 336 5.4E-119 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 BAMF_2446 d126880258d207b00dcdd352770ebaa1 343 PIRSF PIRSF005485 1 341 9.0E-128 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 BAMF_2446 d126880258d207b00dcdd352770ebaa1 343 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 330 33.81 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 BAMF_2446 d126880258d207b00dcdd352770ebaa1 343 Pfam PF01628 HrcA protein C terminal domain 104 323 2.7E-66 T 12-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 BAMF_2446 d126880258d207b00dcdd352770ebaa1 343 SUPERFAMILY SSF55781 71 340 4.9E-71 T 12-10-2018 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 SUPERFAMILY SSF88659 115 191 1.31E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 PRINTS PR00046 Major sigma-70 factor signature 91 99 1.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 PRINTS PR00046 Major sigma-70 factor signature 211 223 1.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 PRINTS PR00046 Major sigma-70 factor signature 228 243 1.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 PRINTS PR00046 Major sigma-70 factor signature 243 254 1.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 PRINTS PR00046 Major sigma-70 factor signature 67 80 1.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 Gene3D G3DSA:1.20.120.1810 3 111 2.4E-27 T 12-10-2018 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 SUPERFAMILY SSF88946 12 111 1.57E-33 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 257 2.2E-35 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 228 254 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 Gene3D G3DSA:1.10.10.10 112 165 5.2E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 Gene3D G3DSA:1.10.10.10 186 260 7.4E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 67 80 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 PIRSF PIRSF000770 13 260 2.2E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 Pfam PF04545 Sigma-70, region 4 208 254 2.8E-13 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 Pfam PF04542 Sigma-70 region 2 43 111 4.7E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 4 258 1.4E-156 T 12-10-2018 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 37 258 8.2E-85 T 12-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 SUPERFAMILY SSF88659 176 258 1.83E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_1604 d3692d4876225b446c3a590ca3e8e166 260 Pfam PF04539 Sigma-70 region 3 125 176 2.5E-8 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BAMF_1408 16cdb8afee2a641a09d759a94812ed29 319 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 244 254 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BAMF_1408 16cdb8afee2a641a09d759a94812ed29 319 PRINTS PR00723 Subtilisin serine protease family (S8) signature 243 259 5.3E-22 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_1408 16cdb8afee2a641a09d759a94812ed29 319 PRINTS PR00723 Subtilisin serine protease family (S8) signature 83 96 5.3E-22 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_1408 16cdb8afee2a641a09d759a94812ed29 319 PRINTS PR00723 Subtilisin serine protease family (S8) signature 41 60 5.3E-22 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_1408 16cdb8afee2a641a09d759a94812ed29 319 Pfam PF00082 Subtilase family 41 284 1.1E-60 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BAMF_1408 16cdb8afee2a641a09d759a94812ed29 319 SUPERFAMILY SSF52743 22 297 4.97E-87 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BAMF_1408 16cdb8afee2a641a09d759a94812ed29 319 Gene3D G3DSA:3.40.50.200 3 308 7.6E-111 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BAMF_1408 16cdb8afee2a641a09d759a94812ed29 319 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 46 57 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BAMF_1408 16cdb8afee2a641a09d759a94812ed29 319 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 87 97 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BAMF_2987 1588b2e4ce2edc5b2136696f0d637317 97 Gene3D G3DSA:1.10.287.1060 1 97 5.1E-27 T 12-10-2018 BAMF_2987 1588b2e4ce2edc5b2136696f0d637317 97 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 5 93 1.6E-26 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like BAMF_2987 1588b2e4ce2edc5b2136696f0d637317 97 Pfam PF06013 Proteins of 100 residues with WXG 5 89 3.3E-25 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like BAMF_2987 1588b2e4ce2edc5b2136696f0d637317 97 SUPERFAMILY SSF140453 4 97 1.19E-23 T 12-10-2018 IPR036689 ESAT-6-like superfamily BAMF_0986 cdf31113039b08667df2fc85038f9214 68 Pfam PF01381 Helix-turn-helix 6 60 3.6E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_0986 cdf31113039b08667df2fc85038f9214 68 SUPERFAMILY SSF47413 2 64 1.29E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_0986 cdf31113039b08667df2fc85038f9214 68 SMART SM00530 5 60 3.1E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_0986 cdf31113039b08667df2fc85038f9214 68 Gene3D G3DSA:1.10.260.40 1 66 1.3E-22 T 12-10-2018 BAMF_2634 7460ecaedf4d1f4ba523381da89877fa 365 SUPERFAMILY SSF53659 4 356 9.22E-123 T 12-10-2018 BAMF_2634 7460ecaedf4d1f4ba523381da89877fa 365 SMART SM01329 4 352 3.6E-198 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BAMF_2634 7460ecaedf4d1f4ba523381da89877fa 365 Gene3D G3DSA:3.40.718.10 2 365 9.3E-152 T 12-10-2018 BAMF_2634 7460ecaedf4d1f4ba523381da89877fa 365 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 351 6.3E-169 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 BAMF_2634 7460ecaedf4d1f4ba523381da89877fa 365 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 352 2.1E-142 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BAMF_2634 7460ecaedf4d1f4ba523381da89877fa 365 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 356 50.423 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 BAMF_2634 7460ecaedf4d1f4ba523381da89877fa 365 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 BAMF_0098 ab653b82e45f799ce80cd33c63d18868 206 Pfam PF08281 Sigma-70, region 4 152 195 3.1E-9 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_0098 ab653b82e45f799ce80cd33c63d18868 206 SUPERFAMILY SSF88946 8 95 1.05E-21 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_0098 ab653b82e45f799ce80cd33c63d18868 206 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 50 63 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_0098 ab653b82e45f799ce80cd33c63d18868 206 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 4 200 8.9E-111 T 12-10-2018 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_0098 ab653b82e45f799ce80cd33c63d18868 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 199 6.3E-28 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_0098 ab653b82e45f799ce80cd33c63d18868 206 SUPERFAMILY SSF88659 113 199 3.4E-11 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_0098 ab653b82e45f799ce80cd33c63d18868 206 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_0098 ab653b82e45f799ce80cd33c63d18868 206 Pfam PF04542 Sigma-70 region 2 26 95 1.8E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_0098 ab653b82e45f799ce80cd33c63d18868 206 PIRSF PIRSF002939 1 206 3.0E-109 T 12-10-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 BAMF_3122 ae79dea210117965b69cdbe65315d192 594 Gene3D G3DSA:1.10.540.10 1 145 3.8E-42 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BAMF_3122 ae79dea210117965b69cdbe65315d192 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 147 239 1.9E-22 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BAMF_3122 ae79dea210117965b69cdbe65315d192 594 Gene3D G3DSA:1.20.140.10 252 422 4.1E-50 T 12-10-2018 BAMF_3122 ae79dea210117965b69cdbe65315d192 594 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 149 161 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BAMF_3122 ae79dea210117965b69cdbe65315d192 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 142 2.1E-28 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BAMF_3122 ae79dea210117965b69cdbe65315d192 594 Gene3D G3DSA:1.20.140.10 423 594 1.7E-51 T 12-10-2018 BAMF_3122 ae79dea210117965b69cdbe65315d192 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 252 416 7.2E-35 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BAMF_3122 ae79dea210117965b69cdbe65315d192 594 SUPERFAMILY SSF56645 21 263 3.53E-73 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BAMF_3122 ae79dea210117965b69cdbe65315d192 594 SUPERFAMILY SSF47203 257 422 1.14E-42 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BAMF_3122 ae79dea210117965b69cdbe65315d192 594 Gene3D G3DSA:2.40.110.10 146 251 1.1E-34 T 12-10-2018 BAMF_3122 ae79dea210117965b69cdbe65315d192 594 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 378 397 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BAMF_3603 d66c85fd92234d0c96e343a40658f224 393 SUPERFAMILY SSF103473 10 376 6.28E-32 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3603 d66c85fd92234d0c96e343a40658f224 393 Gene3D G3DSA:1.20.1250.20 9 376 2.2E-22 T 12-10-2018 BAMF_3603 d66c85fd92234d0c96e343a40658f224 393 PRINTS PR01988 Putative bacilysin exporter bacE signature 349 372 3.8E-143 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_3603 d66c85fd92234d0c96e343a40658f224 393 PRINTS PR01988 Putative bacilysin exporter bacE signature 71 89 3.8E-143 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_3603 d66c85fd92234d0c96e343a40658f224 393 PRINTS PR01988 Putative bacilysin exporter bacE signature 210 232 3.8E-143 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_3603 d66c85fd92234d0c96e343a40658f224 393 PRINTS PR01988 Putative bacilysin exporter bacE signature 133 154 3.8E-143 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_3603 d66c85fd92234d0c96e343a40658f224 393 PRINTS PR01988 Putative bacilysin exporter bacE signature 286 309 3.8E-143 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_3603 d66c85fd92234d0c96e343a40658f224 393 PRINTS PR01988 Putative bacilysin exporter bacE signature 160 177 3.8E-143 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_3603 d66c85fd92234d0c96e343a40658f224 393 PRINTS PR01988 Putative bacilysin exporter bacE signature 247 264 3.8E-143 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_3603 d66c85fd92234d0c96e343a40658f224 393 PRINTS PR01988 Putative bacilysin exporter bacE signature 10 32 3.8E-143 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_3603 d66c85fd92234d0c96e343a40658f224 393 PRINTS PR01988 Putative bacilysin exporter bacE signature 45 63 3.8E-143 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_3603 d66c85fd92234d0c96e343a40658f224 393 PRINTS PR01988 Putative bacilysin exporter bacE signature 94 112 3.8E-143 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_3603 d66c85fd92234d0c96e343a40658f224 393 Pfam PF07690 Major Facilitator Superfamily 11 347 4.2E-17 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_2797 4b21996ee1e60a62fffb050c0cd098c3 464 Gene3D G3DSA:3.30.70.360 184 378 1.8E-170 T 12-10-2018 BAMF_2797 4b21996ee1e60a62fffb050c0cd098c3 464 SUPERFAMILY SSF55031 184 366 2.42E-49 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BAMF_2797 4b21996ee1e60a62fffb050c0cd098c3 464 Pfam PF01546 Peptidase family M20/M25/M40 84 460 2.5E-34 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BAMF_2797 4b21996ee1e60a62fffb050c0cd098c3 464 SUPERFAMILY SSF53187 10 463 3.01E-68 T 12-10-2018 BAMF_2797 4b21996ee1e60a62fffb050c0cd098c3 464 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 11 459 7.1E-172 T 12-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 BAMF_2797 4b21996ee1e60a62fffb050c0cd098c3 464 Gene3D G3DSA:3.30.70.360 205 292 1.8E-170 T 12-10-2018 BAMF_2797 4b21996ee1e60a62fffb050c0cd098c3 464 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 114 152 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BAMF_2797 4b21996ee1e60a62fffb050c0cd098c3 464 Gene3D G3DSA:3.40.630.10 13 462 1.8E-170 T 12-10-2018 BAMF_1405 0e0a4eb2304899c0aabdd30584c47b32 394 PIRSF PIRSF004925 1 388 2.9E-71 T 12-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter BAMF_1405 0e0a4eb2304899c0aabdd30584c47b32 394 Pfam PF12832 MFS_1 like family 6 357 5.4E-31 T 12-10-2018 IPR024989 Major facilitator superfamily associated domain BAMF_1405 0e0a4eb2304899c0aabdd30584c47b32 394 Gene3D G3DSA:1.20.1250.20 2 184 1.2E-13 T 12-10-2018 BAMF_1405 0e0a4eb2304899c0aabdd30584c47b32 394 Gene3D G3DSA:1.20.1250.20 192 387 1.1E-25 T 12-10-2018 BAMF_1405 0e0a4eb2304899c0aabdd30584c47b32 394 SUPERFAMILY SSF103473 5 383 1.31E-33 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3223 1e3a40266117b695f101fb3935515d66 467 SUPERFAMILY SSF55874 292 456 1.24E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3223 1e3a40266117b695f101fb3935515d66 467 Gene3D G3DSA:3.30.565.10 297 456 2.3E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3223 1e3a40266117b695f101fb3935515d66 467 Gene3D G3DSA:1.10.287.130 205 296 7.6E-12 T 12-10-2018 BAMF_3223 1e3a40266117b695f101fb3935515d66 467 SMART SM00388 236 301 4.3E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_3223 1e3a40266117b695f101fb3935515d66 467 PRINTS PR01780 Lantibiotic regulatory protein signature 208 222 2.8E-11 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 BAMF_3223 1e3a40266117b695f101fb3935515d66 467 PRINTS PR01780 Lantibiotic regulatory protein signature 386 402 2.8E-11 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 BAMF_3223 1e3a40266117b695f101fb3935515d66 467 PRINTS PR01780 Lantibiotic regulatory protein signature 407 422 2.8E-11 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 BAMF_3223 1e3a40266117b695f101fb3935515d66 467 PRINTS PR01780 Lantibiotic regulatory protein signature 245 261 2.8E-11 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 BAMF_3223 1e3a40266117b695f101fb3935515d66 467 PRINTS PR01780 Lantibiotic regulatory protein signature 73 88 2.8E-11 T 12-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 BAMF_3223 1e3a40266117b695f101fb3935515d66 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 457 1.2E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3223 1e3a40266117b695f101fb3935515d66 467 SUPERFAMILY SSF47384 221 299 3.14E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_3223 1e3a40266117b695f101fb3935515d66 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 300 1.8E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_3223 1e3a40266117b695f101fb3935515d66 467 SMART SM00387 347 458 5.0E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2872 f6690a72fe97f44a00c6921469905d04 490 Gene3D G3DSA:3.40.309.10 253 446 6.7E-193 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BAMF_2872 f6690a72fe97f44a00c6921469905d04 490 SUPERFAMILY SSF53720 4 480 2.36E-171 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BAMF_2872 f6690a72fe97f44a00c6921469905d04 490 Gene3D G3DSA:3.40.605.10 10 471 6.7E-193 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BAMF_2872 f6690a72fe97f44a00c6921469905d04 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 6 474 7.4E-238 T 12-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 BAMF_2872 f6690a72fe97f44a00c6921469905d04 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BAMF_2872 f6690a72fe97f44a00c6921469905d04 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BAMF_2872 f6690a72fe97f44a00c6921469905d04 490 Pfam PF00171 Aldehyde dehydrogenase family 11 476 3.6E-181 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BAMF_2945 ea2c7e41a63cf01464afcb01d3a1716b 425 SUPERFAMILY SSF47384 206 276 7.26E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_2945 ea2c7e41a63cf01464afcb01d3a1716b 425 Pfam PF00512 His Kinase A (phospho-acceptor) domain 213 276 1.8E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_2945 ea2c7e41a63cf01464afcb01d3a1716b 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 422 7.1E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2945 ea2c7e41a63cf01464afcb01d3a1716b 425 SMART SM00388 211 278 2.2E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_2945 ea2c7e41a63cf01464afcb01d3a1716b 425 Gene3D G3DSA:1.10.287.130 197 277 4.9E-17 T 12-10-2018 BAMF_2945 ea2c7e41a63cf01464afcb01d3a1716b 425 SMART SM00387 317 424 2.6E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2945 ea2c7e41a63cf01464afcb01d3a1716b 425 SUPERFAMILY SSF55874 269 422 1.13E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2945 ea2c7e41a63cf01464afcb01d3a1716b 425 Gene3D G3DSA:3.30.565.10 279 423 2.7E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2945 ea2c7e41a63cf01464afcb01d3a1716b 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 402 5.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2945 ea2c7e41a63cf01464afcb01d3a1716b 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 5.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2945 ea2c7e41a63cf01464afcb01d3a1716b 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 421 5.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1889 ee0783f19cd692250ac377c73559af1c 48 Pfam PF08177 Small acid-soluble spore protein N family 1 47 3.5E-22 T 12-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 BAMF_1889 ee0783f19cd692250ac377c73559af1c 48 Hamap MF_01505 Small, acid-soluble spore protein N [sspN]. 2 48 19.055 T 12-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 BAMF_3559 5b0d2e71f28ca4e56be204f33a1b6556 501 SUPERFAMILY SSF56024 133 331 2.92E-49 T 12-10-2018 BAMF_3559 5b0d2e71f28ca4e56be204f33a1b6556 501 Gene3D G3DSA:3.30.870.10 131 327 3.7E-43 T 12-10-2018 BAMF_3559 5b0d2e71f28ca4e56be204f33a1b6556 501 Hamap MF_01916 Cardiolipin synthase. 34 501 38.06 T 12-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 BAMF_3559 5b0d2e71f28ca4e56be204f33a1b6556 501 Pfam PF13091 PLD-like domain 155 297 1.9E-13 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BAMF_3559 5b0d2e71f28ca4e56be204f33a1b6556 501 Pfam PF13091 PLD-like domain 342 466 3.0E-30 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BAMF_3559 5b0d2e71f28ca4e56be204f33a1b6556 501 Gene3D G3DSA:3.30.870.10 329 476 4.0E-31 T 12-10-2018 BAMF_3559 5b0d2e71f28ca4e56be204f33a1b6556 501 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 38 501 2.3E-135 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 BAMF_3559 5b0d2e71f28ca4e56be204f33a1b6556 501 SMART SM00155 237 264 4.5E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BAMF_3559 5b0d2e71f28ca4e56be204f33a1b6556 501 SMART SM00155 414 441 2.6E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BAMF_3559 5b0d2e71f28ca4e56be204f33a1b6556 501 Pfam PF13396 Phospholipase_D-nuclease N-terminal 42 82 4.5E-7 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal BAMF_3559 5b0d2e71f28ca4e56be204f33a1b6556 501 SUPERFAMILY SSF56024 320 487 2.47E-42 T 12-10-2018 BAMF_1357 a24a3dfb9e8f40dde2f299c015906771 325 SUPERFAMILY SSF69279 18 150 5.1E-13 T 12-10-2018 BAMF_2333 5e7834ed58de1ec8ffc5f3034a80011f 84 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 11 50 1.0E-15 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BAMF_2333 5e7834ed58de1ec8ffc5f3034a80011f 84 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 11 66 1.4E-22 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BAMF_2333 5e7834ed58de1ec8ffc5f3034a80011f 84 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 11 71 14.484 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BAMF_2333 5e7834ed58de1ec8ffc5f3034a80011f 84 Gene3D G3DSA:1.10.287.1040 5 82 1.5E-22 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 BAMF_2333 5e7834ed58de1ec8ffc5f3034a80011f 84 SUPERFAMILY SSF116842 5 74 1.7E-21 T 12-10-2018 BAMF_2333 5e7834ed58de1ec8ffc5f3034a80011f 84 Pfam PF02609 Exonuclease VII small subunit 12 61 1.1E-20 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BAMF_2333 5e7834ed58de1ec8ffc5f3034a80011f 84 PIRSF PIRSF006488 1 83 1.8E-20 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BAMF_3383 45a943b5ab6302b672d9bcbf15b64e55 160 Gene3D G3DSA:1.20.58.300 2 130 6.4E-9 T 12-10-2018 BAMF_3383 45a943b5ab6302b672d9bcbf15b64e55 160 Pfam PF05130 FlgN protein 1 146 3.6E-27 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 BAMF_3383 45a943b5ab6302b672d9bcbf15b64e55 160 SUPERFAMILY SSF140566 2 129 3.14E-19 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 BAMF_1472 e9f19cdb385252d5b47117308ebd013a 288 Gene3D G3DSA:3.40.50.720 1 163 1.4E-55 T 12-10-2018 BAMF_1472 e9f19cdb385252d5b47117308ebd013a 288 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 286 2.4E-35 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 BAMF_1472 e9f19cdb385252d5b47117308ebd013a 288 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 161 1.7E-53 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 BAMF_1472 e9f19cdb385252d5b47117308ebd013a 288 SUPERFAMILY SSF48179 164 286 1.7E-38 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_1472 e9f19cdb385252d5b47117308ebd013a 288 PIRSF PIRSF000103 1 287 4.4E-72 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 BAMF_1472 e9f19cdb385252d5b47117308ebd013a 288 Gene3D G3DSA:1.10.1040.10 164 288 2.0E-40 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BAMF_1472 e9f19cdb385252d5b47117308ebd013a 288 SUPERFAMILY SSF51735 3 164 1.18E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1472 e9f19cdb385252d5b47117308ebd013a 288 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 BAMF_3683 0fab80a848f584ba29ccfd3787766dea 394 PIRSF PIRSF500216 1 394 1.1E-169 T 12-10-2018 IPR024024 D-alanyl transfer protein DltB BAMF_3683 0fab80a848f584ba29ccfd3787766dea 394 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 143 376 1.2E-15 T 12-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT BAMF_3683 0fab80a848f584ba29ccfd3787766dea 394 PIRSF PIRSF016636 2 393 3.4E-86 T 12-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB BAMF_3683 0fab80a848f584ba29ccfd3787766dea 394 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 3 389 1.0E-158 T 12-10-2018 IPR024024 D-alanyl transfer protein DltB BAMF_1056 19c993f152fc3a6f67bb5f712788d551 34 Pfam PF17444 Uncharacterized protein YhdX 1 33 1.5E-21 T 12-10-2018 IPR035384 Uncharacterized protein YhdX BAMF_1056 19c993f152fc3a6f67bb5f712788d551 34 ProDom PD047280 YHDX 1 33 8.0E-9 T 12-10-2018 IPR035384 Uncharacterized protein YhdX BAMF_0323 3e8e668b48e1ae344d3b216eae270343 206 Pfam PF02441 Flavoprotein 15 177 4.0E-27 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BAMF_0323 3e8e668b48e1ae344d3b216eae270343 206 SUPERFAMILY SSF52507 15 198 8.63E-62 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BAMF_0323 3e8e668b48e1ae344d3b216eae270343 206 Gene3D G3DSA:3.40.50.1950 15 204 1.2E-78 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BAMF_0323 3e8e668b48e1ae344d3b216eae270343 206 Hamap MF_01986 Probable UbiX-like flavin prenyltransferase. 15 202 50.545 T 12-10-2018 IPR032901 Probable UbiX-like flavin prenyltransferase BAMF_0323 3e8e668b48e1ae344d3b216eae270343 206 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 15 198 37.267 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like BAMF_0323 3e8e668b48e1ae344d3b216eae270343 206 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 16 196 1.6E-88 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like BAMF_3182 7c90420366b8a31a515da920a03bf425 215 Gene3D G3DSA:3.40.50.12740 3 211 2.4E-58 T 12-10-2018 BAMF_3182 7c90420366b8a31a515da920a03bf425 215 SMART SM00448 3 115 5.9E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3182 7c90420366b8a31a515da920a03bf425 215 Pfam PF00072 Response regulator receiver domain 5 116 2.3E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3182 7c90420366b8a31a515da920a03bf425 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.4E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3182 7c90420366b8a31a515da920a03bf425 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.4E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3182 7c90420366b8a31a515da920a03bf425 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.4E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3182 7c90420366b8a31a515da920a03bf425 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 205 9.9E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3182 7c90420366b8a31a515da920a03bf425 215 SMART SM00421 149 206 3.2E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3182 7c90420366b8a31a515da920a03bf425 215 SUPERFAMILY SSF52172 1 132 6.12E-31 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_3182 7c90420366b8a31a515da920a03bf425 215 SUPERFAMILY SSF46894 144 207 1.33E-15 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_0143 773cf736d127e9b0d9cda0ea8cd8557b 314 Gene3D G3DSA:1.10.150.20 237 314 1.5E-34 T 12-10-2018 BAMF_0143 773cf736d127e9b0d9cda0ea8cd8557b 314 SUPERFAMILY SSF55257 5 230 8.04E-31 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0143 773cf736d127e9b0d9cda0ea8cd8557b 314 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 305 1.9E-29 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0143 773cf736d127e9b0d9cda0ea8cd8557b 314 Gene3D G3DSA:2.170.120.12 50 170 5.3E-87 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0143 773cf736d127e9b0d9cda0ea8cd8557b 314 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 37.104 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0143 773cf736d127e9b0d9cda0ea8cd8557b 314 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 6.6E-23 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0143 773cf736d127e9b0d9cda0ea8cd8557b 314 Gene3D G3DSA:3.30.1360.10 17 221 5.3E-87 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0143 773cf736d127e9b0d9cda0ea8cd8557b 314 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 310 1.0E-25 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0143 773cf736d127e9b0d9cda0ea8cd8557b 314 SMART SM00662 20 227 3.9E-102 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0143 773cf736d127e9b0d9cda0ea8cd8557b 314 SUPERFAMILY SSF47789 247 313 7.85E-25 T 12-10-2018 BAMF_0143 773cf736d127e9b0d9cda0ea8cd8557b 314 SUPERFAMILY SSF56553 50 171 9.94E-44 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0143 773cf736d127e9b0d9cda0ea8cd8557b 314 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 313 7.7E-125 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0143 773cf736d127e9b0d9cda0ea8cd8557b 314 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 152 4.5E-24 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_1808 09dfc82c6a92f9c0d03ede22ff740cb2 329 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 5 322 2.8E-146 T 12-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BAMF_1808 09dfc82c6a92f9c0d03ede22ff740cb2 329 PIRSF PIRSF000355 1 319 2.4E-95 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_1808 09dfc82c6a92f9c0d03ede22ff740cb2 329 Gene3D G3DSA:1.10.620.20 3 293 1.9E-114 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 BAMF_1808 09dfc82c6a92f9c0d03ede22ff740cb2 329 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 96 113 - T 12-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_1808 09dfc82c6a92f9c0d03ede22ff740cb2 329 Pfam PF00268 Ribonucleotide reductase, small chain 8 284 2.3E-81 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_1808 09dfc82c6a92f9c0d03ede22ff740cb2 329 SUPERFAMILY SSF47240 4 322 1.7E-91 T 12-10-2018 IPR009078 Ferritin-like superfamily BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 SUPERFAMILY SSF55874 1 197 1.11E-59 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 Gene3D G3DSA:1.20.120.790 483 614 3.2E-36 T 12-10-2018 IPR037196 HSP90, C-terminal domain BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 PRINTS PR00775 90kDa heat shock protein signature 60 77 5.9E-49 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 PRINTS PR00775 90kDa heat shock protein signature 78 95 5.9E-49 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 PRINTS PR00775 90kDa heat shock protein signature 176 194 5.9E-49 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 PRINTS PR00775 90kDa heat shock protein signature 11 33 5.9E-49 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 PRINTS PR00775 90kDa heat shock protein signature 103 125 5.9E-49 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 PRINTS PR00775 90kDa heat shock protein signature 153 170 5.9E-49 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 SMART SM00387 12 165 1.4E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 Pfam PF00183 Hsp90 protein 204 613 1.2E-111 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 Pfam PF00183 Hsp90 protein 172 217 1.3E-6 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 614 26.233 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 PIRSF PIRSF002583 1 614 4.9E-201 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 14 138 1.1E-12 T 12-10-2018 BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 Gene3D G3DSA:3.30.230.80 223 395 1.5E-54 T 12-10-2018 BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 Gene3D G3DSA:3.40.50.11260 396 482 4.5E-27 T 12-10-2018 BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 Gene3D G3DSA:3.30.565.10 1 216 9.3E-71 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 SUPERFAMILY SSF54211 224 476 1.44E-81 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 SUPERFAMILY SSF110942 499 613 3.01E-29 T 12-10-2018 IPR037196 HSP90, C-terminal domain BAMF_3792 856c6ffcf2e6f5e8d411e6bf4736d28d 614 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 10 19 - T 12-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 BAMF_0578 31618c604abda0b19c9f231aed7954e3 424 Gene3D G3DSA:3.40.50.300 10 235 1.8E-55 T 12-10-2018 BAMF_0578 31618c604abda0b19c9f231aed7954e3 424 Pfam PF04466 Phage terminase large subunit 31 232 1.3E-47 T 12-10-2018 IPR035412 Phage terminase large subunit, N-terminal BAMF_0578 31618c604abda0b19c9f231aed7954e3 424 Gene3D G3DSA:3.30.420.280 238 423 2.8E-55 T 12-10-2018 BAMF_0578 31618c604abda0b19c9f231aed7954e3 424 Pfam PF17288 Terminase RNAseH like domain 267 411 4.5E-19 T 12-10-2018 IPR035413 Phage terminase large subunit, C-terminal BAMF_0578 31618c604abda0b19c9f231aed7954e3 424 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 30 413 1.7E-52 T 12-10-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 BAMF_0100 620ef5a1eb1571a091befd61d2fa1cb5 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 5 57 1.7E-20 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BAMF_0100 620ef5a1eb1571a091befd61d2fa1cb5 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 3 58 6.2E-24 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BAMF_0100 620ef5a1eb1571a091befd61d2fa1cb5 59 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 6 34 - T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BAMF_0100 620ef5a1eb1571a091befd61d2fa1cb5 59 Gene3D G3DSA:1.20.5.1030 1 58 1.5E-18 T 12-10-2018 IPR038379 SecE superfamily BAMF_0100 620ef5a1eb1571a091befd61d2fa1cb5 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 1 56 12.738 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BAMF_2751 5562960b016e683782f5e6bfe83ac726 381 Gene3D G3DSA:3.90.1150.10 2 367 3.4E-126 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_2751 5562960b016e683782f5e6bfe83ac726 381 PIRSF PIRSF005572 1 380 1.2E-107 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BAMF_2751 5562960b016e683782f5e6bfe83ac726 381 SUPERFAMILY SSF53383 1 375 4.26E-97 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_2751 5562960b016e683782f5e6bfe83ac726 381 Gene3D G3DSA:1.10.260.50 13 279 3.4E-126 T 12-10-2018 BAMF_2751 5562960b016e683782f5e6bfe83ac726 381 Pfam PF00266 Aminotransferase class-V 2 360 4.6E-76 T 12-10-2018 IPR000192 Aminotransferase class V domain BAMF_2751 5562960b016e683782f5e6bfe83ac726 381 Gene3D G3DSA:3.40.640.10 59 235 3.4E-126 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_2258 d902cbe0d883c70d640a5aceada5a4ef 185 ProSitePatterns PS00893 Nudix box signature. 78 99 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BAMF_2258 d902cbe0d883c70d640a5aceada5a4ef 185 PRINTS PR00502 NUDIX hydrolase family signature 73 87 1.1E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BAMF_2258 d902cbe0d883c70d640a5aceada5a4ef 185 PRINTS PR00502 NUDIX hydrolase family signature 87 102 1.1E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BAMF_2258 d902cbe0d883c70d640a5aceada5a4ef 185 SUPERFAMILY SSF55811 8 178 3.38E-50 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BAMF_2258 d902cbe0d883c70d640a5aceada5a4ef 185 Gene3D G3DSA:3.90.79.10 4 184 3.1E-56 T 12-10-2018 BAMF_2258 d902cbe0d883c70d640a5aceada5a4ef 185 Pfam PF00293 NUDIX domain 43 159 1.2E-19 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BAMF_1528 e4607380ece07a36191bb71be55210c0 69 Hamap MF_01553 UPF0356 protein . 1 69 22.637 T 12-10-2018 IPR009907 Protein of unknown function DUF1447 BAMF_1528 e4607380ece07a36191bb71be55210c0 69 Pfam PF07288 Protein of unknown function (DUF1447) 2 68 3.2E-30 T 12-10-2018 IPR009907 Protein of unknown function DUF1447 BAMF_1528 e4607380ece07a36191bb71be55210c0 69 Gene3D G3DSA:3.10.20.730 1 58 1.3E-27 T 12-10-2018 BAMF_1528 e4607380ece07a36191bb71be55210c0 69 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 68 1.0E-30 T 12-10-2018 IPR009907 Protein of unknown function DUF1447 BAMF_2122 a3f5ea1011573456b6fdd12da117c2bb 748 SMART SM00490 302 389 5.6E-14 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_2122 a3f5ea1011573456b6fdd12da117c2bb 748 SMART SM00487 51 255 2.7E-32 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_2122 a3f5ea1011573456b6fdd12da117c2bb 748 Pfam PF00271 Helicase conserved C-terminal domain 285 388 3.3E-13 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_2122 a3f5ea1011573456b6fdd12da117c2bb 748 SUPERFAMILY SSF52540 101 408 3.74E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2122 a3f5ea1011573456b6fdd12da117c2bb 748 Gene3D G3DSA:3.40.50.300 21 244 1.1E-47 T 12-10-2018 BAMF_2122 a3f5ea1011573456b6fdd12da117c2bb 748 Gene3D G3DSA:3.40.50.300 266 471 4.0E-20 T 12-10-2018 BAMF_2122 a3f5ea1011573456b6fdd12da117c2bb 748 Pfam PF09369 Domain of unknown function (DUF1998) 649 728 2.9E-19 T 12-10-2018 IPR018973 DEAD/DEAH-box helicase, putative BAMF_2122 a3f5ea1011573456b6fdd12da117c2bb 748 Pfam PF00270 DEAD/DEAH box helicase 58 226 1.0E-26 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BAMF_1319 8e30dba24a0ce63a318d72d5544e82fe 134 Pfam PF02614 Glucuronate isomerase 1 117 1.2E-60 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 BAMF_1319 8e30dba24a0ce63a318d72d5544e82fe 134 Gene3D G3DSA:1.10.2020.10 25 110 1.6E-41 T 12-10-2018 BAMF_1319 8e30dba24a0ce63a318d72d5544e82fe 134 Gene3D G3DSA:3.20.20.140 1 24 2.0E-6 T 12-10-2018 BAMF_1319 8e30dba24a0ce63a318d72d5544e82fe 134 SUPERFAMILY SSF51556 1 116 3.1E-49 T 12-10-2018 IPR032466 Metal-dependent hydrolase BAMF_0466 37d5d926753dc0c5243cee901bd9ec1e 109 SUPERFAMILY SSF52151 4 77 6.28E-12 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BAMF_0466 37d5d926753dc0c5243cee901bd9ec1e 109 Gene3D G3DSA:3.40.1090.10 2 109 4.0E-10 T 12-10-2018 BAMF_0466 37d5d926753dc0c5243cee901bd9ec1e 109 Pfam PF01734 Patatin-like phospholipase 8 75 7.2E-11 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 BAMF_2431 ec592c786cc4e8746a214adb249dc127 319 Gene3D G3DSA:3.40.50.300 110 316 3.5E-77 T 12-10-2018 BAMF_2431 ec592c786cc4e8746a214adb249dc127 319 Pfam PF02562 PhoH-like protein 113 316 6.3E-96 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 BAMF_2431 ec592c786cc4e8746a214adb249dc127 319 SUPERFAMILY SSF52540 67 278 5.69E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3899 946e26772cefef729d14e11bcaa53d3f 181 Gene3D G3DSA:3.40.50.2300 26 148 1.3E-17 T 12-10-2018 BAMF_3899 946e26772cefef729d14e11bcaa53d3f 181 Gene3D G3DSA:3.40.50.2300 7 163 1.3E-17 T 12-10-2018 BAMF_3899 946e26772cefef729d14e11bcaa53d3f 181 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 6 164 1.9E-21 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain BAMF_3899 946e26772cefef729d14e11bcaa53d3f 181 SUPERFAMILY SSF53822 8 164 5.89E-18 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BAMF_0975 338ea8b49835c7f07914317e218ba88e 328 SUPERFAMILY SSF52540 5 254 8.67E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0975 338ea8b49835c7f07914317e218ba88e 328 Gene3D G3DSA:3.40.50.300 3 328 2.2E-99 T 12-10-2018 BAMF_0975 338ea8b49835c7f07914317e218ba88e 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 300 4.0E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BAMF_0975 338ea8b49835c7f07914317e218ba88e 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 320 6.6E-28 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BAMF_0975 338ea8b49835c7f07914317e218ba88e 328 Pfam PF00005 ABC transporter 26 183 1.7E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0975 338ea8b49835c7f07914317e218ba88e 328 SMART SM00382 34 233 1.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0932 3557dd32b0b53850377b35a819ab80fc 76 SUPERFAMILY SSF47413 7 58 3.66E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_0932 3557dd32b0b53850377b35a819ab80fc 76 SMART SM00530 6 62 1.9E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_0932 3557dd32b0b53850377b35a819ab80fc 76 Pfam PF01381 Helix-turn-helix 9 61 1.1E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_0932 3557dd32b0b53850377b35a819ab80fc 76 Gene3D G3DSA:1.10.260.40 2 62 1.3E-11 T 12-10-2018 BAMF_1266 d727e810e499cef0d7d830b511f07d16 373 Gene3D G3DSA:3.40.640.10 3 246 4.3E-84 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_1266 d727e810e499cef0d7d830b511f07d16 373 Gene3D G3DSA:3.90.1150.10 280 364 1.5E-22 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1266 d727e810e499cef0d7d830b511f07d16 373 Gene3D G3DSA:3.90.1150.10 247 279 1.7E-7 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1266 d727e810e499cef0d7d830b511f07d16 373 PIRSF PIRSF001434 1 366 1.3E-119 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BAMF_1266 d727e810e499cef0d7d830b511f07d16 373 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 189 203 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BAMF_1266 d727e810e499cef0d7d830b511f07d16 373 SUPERFAMILY SSF53383 20 365 3.54E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_1266 d727e810e499cef0d7d830b511f07d16 373 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 363 1.6E-132 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BAMF_3290 fbabbf5dff17b26b16f907223a972bbc 151 Pfam PF08671 Anti-repressor SinI 123 148 2.3E-10 T 12-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 BAMF_3290 fbabbf5dff17b26b16f907223a972bbc 151 SMART SM00530 5 61 1.2E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_3290 fbabbf5dff17b26b16f907223a972bbc 151 SUPERFAMILY SSF47413 2 65 2.28E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_3290 fbabbf5dff17b26b16f907223a972bbc 151 Pfam PF01381 Helix-turn-helix 6 61 3.5E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_3290 fbabbf5dff17b26b16f907223a972bbc 151 Gene3D G3DSA:1.10.260.40 1 109 7.5E-20 T 12-10-2018 BAMF_3290 fbabbf5dff17b26b16f907223a972bbc 151 SUPERFAMILY SSF47406 123 147 1.83E-5 T 12-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 BAMF_2412 26fa5669d3db07d2f5c119abb355cfef 438 SMART SM00487 23 223 1.9E-54 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_2412 26fa5669d3db07d2f5c119abb355cfef 438 SUPERFAMILY SSF52540 73 361 1.04E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2412 26fa5669d3db07d2f5c119abb355cfef 438 Pfam PF00270 DEAD/DEAH box helicase 28 195 2.8E-43 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BAMF_2412 26fa5669d3db07d2f5c119abb355cfef 438 Gene3D G3DSA:3.40.50.300 216 402 1.7E-43 T 12-10-2018 BAMF_2412 26fa5669d3db07d2f5c119abb355cfef 438 Pfam PF00271 Helicase conserved C-terminal domain 235 340 3.2E-27 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_2412 26fa5669d3db07d2f5c119abb355cfef 438 Gene3D G3DSA:3.40.50.300 2 215 3.5E-66 T 12-10-2018 BAMF_2412 26fa5669d3db07d2f5c119abb355cfef 438 SMART SM00490 259 340 8.1E-31 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_2412 26fa5669d3db07d2f5c119abb355cfef 438 Hamap MF_01494 DEAD-box ATP-dependent RNA helicase CshB [cshB]. 4 437 50.414 T 12-10-2018 IPR030881 DEAD-box ATP-dependent RNA helicase CshB GO:0004386|GO:0009409 BAMF_2452 f75a136c4adaf017951e799834734223 88 Gene3D G3DSA:1.20.58.110 1 87 1.5E-29 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2452 f75a136c4adaf017951e799834734223 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 88 3.0E-32 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2452 f75a136c4adaf017951e799834734223 88 Pfam PF01649 Ribosomal protein S20 2 84 6.1E-27 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2452 f75a136c4adaf017951e799834734223 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 1.1E-33 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2452 f75a136c4adaf017951e799834734223 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.128 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2452 f75a136c4adaf017951e799834734223 88 SUPERFAMILY SSF46992 3 86 3.01E-28 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0048 f4f8fcc26e63d2454a765e06bc7a4222 126 Gene3D G3DSA:3.30.1330.40 2 125 1.8E-56 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BAMF_0048 f4f8fcc26e63d2454a765e06bc7a4222 126 Pfam PF01042 Endoribonuclease L-PSP 7 123 2.9E-48 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BAMF_0048 f4f8fcc26e63d2454a765e06bc7a4222 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 123 3.2E-56 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 BAMF_0048 f4f8fcc26e63d2454a765e06bc7a4222 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 100 118 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 BAMF_0048 f4f8fcc26e63d2454a765e06bc7a4222 126 SUPERFAMILY SSF55298 2 125 1.48E-47 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BAMF_1329 a02ef9988426b29095197faaecd7237e 317 SUPERFAMILY SSF55846 7 158 5.47E-47 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_1329 a02ef9988426b29095197faaecd7237e 317 SMART SM00644 15 153 3.9E-42 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_1329 a02ef9988426b29095197faaecd7237e 317 Gene3D G3DSA:3.10.350.10 172 237 3.0E-18 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1329 a02ef9988426b29095197faaecd7237e 317 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 24 142 8.2E-18 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_1329 a02ef9988426b29095197faaecd7237e 317 Gene3D G3DSA:3.40.80.10 3 165 8.4E-51 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_1329 a02ef9988426b29095197faaecd7237e 317 SMART SM00257 178 222 1.0E-16 T 12-10-2018 IPR018392 LysM domain BAMF_1329 a02ef9988426b29095197faaecd7237e 317 Pfam PF01471 Putative peptidoglycan binding domain 252 312 5.2E-17 T 12-10-2018 IPR002477 Peptidoglycan binding-like BAMF_1329 a02ef9988426b29095197faaecd7237e 317 Gene3D G3DSA:1.10.101.10 240 317 7.7E-19 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BAMF_1329 a02ef9988426b29095197faaecd7237e 317 Pfam PF01476 LysM domain 179 222 3.8E-15 T 12-10-2018 IPR018392 LysM domain BAMF_1329 a02ef9988426b29095197faaecd7237e 317 SUPERFAMILY SSF54106 178 222 6.54E-11 T 12-10-2018 BAMF_1329 a02ef9988426b29095197faaecd7237e 317 SUPERFAMILY SSF47090 243 313 5.76E-16 T 12-10-2018 IPR036365 PGBD-like superfamily BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 SMART SM00400 36 90 8.0E-36 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 SMART SM00493 262 333 6.4E-17 T 12-10-2018 IPR006171 TOPRIM domain BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 Gene3D G3DSA:3.90.580.10 1 100 1.3E-41 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 Pfam PF10410 DnaB-helicase binding domain of primase 371 425 5.5E-11 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 Pfam PF01807 CHC2 zinc finger 6 99 6.9E-40 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 Gene3D G3DSA:3.90.980.10 112 243 2.0E-54 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 SUPERFAMILY SSF48024 462 563 1.02E-8 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 Pfam PF08275 DNA primase catalytic core, N-terminal domain 128 255 3.5E-46 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 SUPERFAMILY SSF57783 4 98 1.7E-36 T 12-10-2018 BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 PIRSF PIRSF002811 2 603 1.2E-203 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 Gene3D G3DSA:1.10.860.10 467 563 7.7E-31 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 Pfam PF13155 Toprim-like 265 350 1.2E-18 T 12-10-2018 BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 Hamap MF_00974 DNA primase [dnaG]. 4 593 30.08 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 TIGRFAM TIGR01391 dnaG: DNA primase 4 420 1.8E-151 T 12-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 SUPERFAMILY SSF56731 117 426 7.06E-103 T 12-10-2018 BAMF_2419 d8d34e82fc41917b084ca1d50e5141d8 603 Gene3D G3DSA:3.40.1360.10 244 368 3.7E-38 T 12-10-2018 BAMF_3868 1cfa8eb186b8adc18bf00fce28dc5212 395 SUPERFAMILY SSF56059 114 316 4.77E-25 T 12-10-2018 BAMF_3868 1cfa8eb186b8adc18bf00fce28dc5212 395 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 308 1.1E-8 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_3868 1cfa8eb186b8adc18bf00fce28dc5212 395 Gene3D G3DSA:3.30.470.130 87 335 1.3E-18 T 12-10-2018 BAMF_0101 f7f97f577f651c00e6eb300073b1bb02 177 Gene3D G3DSA:2.30.30.30 119 177 1.5E-24 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 BAMF_0101 f7f97f577f651c00e6eb300073b1bb02 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 2.3E-21 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BAMF_0101 f7f97f577f651c00e6eb300073b1bb02 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 2.3E-21 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BAMF_0101 f7f97f577f651c00e6eb300073b1bb02 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 2.3E-21 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BAMF_0101 f7f97f577f651c00e6eb300073b1bb02 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 12-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site BAMF_0101 f7f97f577f651c00e6eb300073b1bb02 177 SUPERFAMILY SSF82679 2 114 2.09E-41 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BAMF_0101 f7f97f577f651c00e6eb300073b1bb02 177 SUPERFAMILY SSF50104 121 177 1.12E-19 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily BAMF_0101 f7f97f577f651c00e6eb300073b1bb02 177 Pfam PF00467 KOW motif 128 158 3.4E-8 T 12-10-2018 IPR005824 KOW BAMF_0101 f7f97f577f651c00e6eb300073b1bb02 177 Pfam PF02357 Transcription termination factor nusG 3 109 1.5E-28 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BAMF_0101 f7f97f577f651c00e6eb300073b1bb02 177 SMART SM00739 123 150 2.2E-6 T 12-10-2018 IPR005824 KOW BAMF_0101 f7f97f577f651c00e6eb300073b1bb02 177 Gene3D G3DSA:3.30.70.940 1 118 9.2E-46 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BAMF_0101 f7f97f577f651c00e6eb300073b1bb02 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 30.556 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BAMF_0101 f7f97f577f651c00e6eb300073b1bb02 177 SMART SM00738 2 113 7.4E-55 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BAMF_0101 f7f97f577f651c00e6eb300073b1bb02 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 7.5E-69 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BAMF_0376 0ce32bc59f075f286db82b56d560787f 337 SMART SM00797 24 323 3.2E-139 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B BAMF_0376 0ce32bc59f075f286db82b56d560787f 337 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 332 2.4E-89 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B BAMF_0376 0ce32bc59f075f286db82b56d560787f 337 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 306 3.1E-91 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B BAMF_0376 0ce32bc59f075f286db82b56d560787f 337 Gene3D G3DSA:2.40.100.10 196 335 6.8E-51 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily BAMF_0376 0ce32bc59f075f286db82b56d560787f 337 SUPERFAMILY SSF50891 207 313 6.83E-7 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily BAMF_0978 c04398bfadf5d4375ed1ba7aefc0b6c3 311 Gene3D G3DSA:3.20.20.140 7 306 4.1E-52 T 12-10-2018 BAMF_0978 c04398bfadf5d4375ed1ba7aefc0b6c3 311 SUPERFAMILY SSF51556 10 305 3.71E-44 T 12-10-2018 IPR032466 Metal-dependent hydrolase BAMF_0978 c04398bfadf5d4375ed1ba7aefc0b6c3 311 Pfam PF04909 Amidohydrolase 73 301 9.7E-36 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BAMF_1747 b292d4756fdfe6aa79d53fc3dcd5aa15 346 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 341 37.529 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_1747 b292d4756fdfe6aa79d53fc3dcd5aa15 346 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 237 251 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_1747 b292d4756fdfe6aa79d53fc3dcd5aa15 346 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 342 1.1E-163 T 12-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_1747 b292d4756fdfe6aa79d53fc3dcd5aa15 346 SUPERFAMILY SSF51735 5 157 9.04E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1747 b292d4756fdfe6aa79d53fc3dcd5aa15 346 SMART SM00859 6 121 2.1E-40 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BAMF_1747 b292d4756fdfe6aa79d53fc3dcd5aa15 346 Gene3D G3DSA:3.40.50.720 7 338 5.3E-141 T 12-10-2018 BAMF_1747 b292d4756fdfe6aa79d53fc3dcd5aa15 346 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 327 1.6E-59 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BAMF_1747 b292d4756fdfe6aa79d53fc3dcd5aa15 346 SUPERFAMILY SSF55347 129 328 7.14E-74 T 12-10-2018 BAMF_1747 b292d4756fdfe6aa79d53fc3dcd5aa15 346 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 120 8.3E-34 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BAMF_1747 b292d4756fdfe6aa79d53fc3dcd5aa15 346 Gene3D G3DSA:3.30.360.10 128 324 5.3E-141 T 12-10-2018 BAMF_1747 b292d4756fdfe6aa79d53fc3dcd5aa15 346 PIRSF PIRSF000148 4 346 1.9E-128 T 12-10-2018 BAMF_0601 e3532b49a8556721d93ea7c80605a3b4 323 Gene3D G3DSA:3.40.80.10 3 163 9.9E-49 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_0601 e3532b49a8556721d93ea7c80605a3b4 323 Gene3D G3DSA:3.10.350.10 177 241 1.9E-18 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_0601 e3532b49a8556721d93ea7c80605a3b4 323 Pfam PF01476 LysM domain 184 226 2.4E-14 T 12-10-2018 IPR018392 LysM domain BAMF_0601 e3532b49a8556721d93ea7c80605a3b4 323 SMART SM00644 15 153 6.4E-38 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_0601 e3532b49a8556721d93ea7c80605a3b4 323 SMART SM00257 183 227 4.5E-16 T 12-10-2018 IPR018392 LysM domain BAMF_0601 e3532b49a8556721d93ea7c80605a3b4 323 Pfam PF01471 Putative peptidoglycan binding domain 256 318 3.3E-17 T 12-10-2018 IPR002477 Peptidoglycan binding-like BAMF_0601 e3532b49a8556721d93ea7c80605a3b4 323 Gene3D G3DSA:1.10.101.10 249 323 3.5E-18 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BAMF_0601 e3532b49a8556721d93ea7c80605a3b4 323 SUPERFAMILY SSF55846 6 158 2.88E-45 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_0601 e3532b49a8556721d93ea7c80605a3b4 323 SUPERFAMILY SSF54106 183 226 5.36E-10 T 12-10-2018 BAMF_0601 e3532b49a8556721d93ea7c80605a3b4 323 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 24 142 5.9E-17 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_0601 e3532b49a8556721d93ea7c80605a3b4 323 SUPERFAMILY SSF47090 248 318 9.16E-18 T 12-10-2018 IPR036365 PGBD-like superfamily BAMF_2203 10a717fecd303f20804243dd9dfbacbc 496 SUPERFAMILY SSF52540 57 346 3.52E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2203 10a717fecd303f20804243dd9dfbacbc 496 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 349 1.5E-106 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 BAMF_2203 10a717fecd303f20804243dd9dfbacbc 496 SMART SM00490 242 324 3.3E-23 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_2203 10a717fecd303f20804243dd9dfbacbc 496 Pfam PF00270 DEAD/DEAH box helicase 20 178 4.4E-20 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BAMF_2203 10a717fecd303f20804243dd9dfbacbc 496 SMART SM00487 13 210 2.4E-25 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_2203 10a717fecd303f20804243dd9dfbacbc 496 Gene3D G3DSA:3.40.50.300 1 197 5.3E-70 T 12-10-2018 BAMF_2203 10a717fecd303f20804243dd9dfbacbc 496 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 131 140 - T 12-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site BAMF_2203 10a717fecd303f20804243dd9dfbacbc 496 Pfam PF00271 Helicase conserved C-terminal domain 216 323 3.7E-16 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_0730 ad4b29308d0d1a30d1cc963c4e3d1ad8 105 Pfam PF00753 Metallo-beta-lactamase superfamily 9 81 5.1E-9 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_0730 ad4b29308d0d1a30d1cc963c4e3d1ad8 105 Gene3D G3DSA:3.60.15.10 6 103 1.6E-15 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_0730 ad4b29308d0d1a30d1cc963c4e3d1ad8 105 SUPERFAMILY SSF56281 9 96 1.02E-14 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_1644 415a408343d77f58157e59d21992257f 160 Gene3D G3DSA:3.90.45.10 1 156 4.1E-61 T 12-10-2018 IPR036821 Peptide deformylase superfamily BAMF_1644 415a408343d77f58157e59d21992257f 160 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 158 6.1E-57 T 12-10-2018 IPR023635 Peptide deformylase BAMF_1644 415a408343d77f58157e59d21992257f 160 PIRSF PIRSF004749 1 160 6.1E-51 T 12-10-2018 IPR023635 Peptide deformylase BAMF_1644 415a408343d77f58157e59d21992257f 160 Pfam PF01327 Polypeptide deformylase 3 147 1.1E-49 T 12-10-2018 IPR023635 Peptide deformylase BAMF_1644 415a408343d77f58157e59d21992257f 160 SUPERFAMILY SSF56420 2 152 2.88E-56 T 12-10-2018 IPR036821 Peptide deformylase superfamily BAMF_1644 415a408343d77f58157e59d21992257f 160 Hamap MF_00163 Peptide deformylase [def]. 2 158 29.978 T 12-10-2018 IPR023635 Peptide deformylase BAMF_1644 415a408343d77f58157e59d21992257f 160 PRINTS PR01576 Peptide deformylase signature 119 148 2.8E-37 T 12-10-2018 IPR023635 Peptide deformylase BAMF_1644 415a408343d77f58157e59d21992257f 160 PRINTS PR01576 Peptide deformylase signature 88 99 2.8E-37 T 12-10-2018 IPR023635 Peptide deformylase BAMF_1644 415a408343d77f58157e59d21992257f 160 PRINTS PR01576 Peptide deformylase signature 33 62 2.8E-37 T 12-10-2018 IPR023635 Peptide deformylase BAMF_1644 415a408343d77f58157e59d21992257f 160 PRINTS PR01576 Peptide deformylase signature 100 118 2.8E-37 T 12-10-2018 IPR023635 Peptide deformylase BAMF_0195 99a0f0ce0e1e05fe47b1c4ff056236cf 311 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0195 99a0f0ce0e1e05fe47b1c4ff056236cf 311 SMART SM00382 26 210 1.0E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0195 99a0f0ce0e1e05fe47b1c4ff056236cf 311 Pfam PF00005 ABC transporter 18 160 2.3E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0195 99a0f0ce0e1e05fe47b1c4ff056236cf 311 Gene3D G3DSA:3.40.50.300 1 240 2.3E-71 T 12-10-2018 BAMF_0195 99a0f0ce0e1e05fe47b1c4ff056236cf 311 SUPERFAMILY SSF52540 2 224 1.6E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3400 c35882fd83cced3f60e207ba321c7878 398 Pfam PF13439 Glycosyltransferase Family 4 23 197 5.6E-18 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BAMF_3400 c35882fd83cced3f60e207ba321c7878 398 SUPERFAMILY SSF53756 1 387 1.18E-67 T 12-10-2018 BAMF_3400 c35882fd83cced3f60e207ba321c7878 398 Pfam PF00534 Glycosyl transferases group 1 206 346 1.2E-29 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 BAMF_3400 c35882fd83cced3f60e207ba321c7878 398 Gene3D G3DSA:3.40.50.2000 1 208 5.5E-30 T 12-10-2018 BAMF_3400 c35882fd83cced3f60e207ba321c7878 398 Gene3D G3DSA:3.40.50.2000 209 387 6.9E-30 T 12-10-2018 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 892 1010 2.2E-9 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1849 1961 2.6E-13 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 SMART SM00823 Phosphopantetheine attachment site 2087 2143 0.17 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 SMART SM00823 Phosphopantetheine attachment site 381 451 8.9E-9 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 SMART SM00823 Phosphopantetheine attachment site 1373 1444 2.2E-9 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Gene3D G3DSA:3.40.47.10 1487 2066 2.3E-191 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 SMART SM01294 382 447 2.2E-4 T 12-10-2018 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Gene3D G3DSA:1.10.1200.10 2089 2153 1.4E-8 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Gene3D G3DSA:3.40.50.150 71 334 7.7E-47 T 12-10-2018 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 SUPERFAMILY SSF53901 1485 1897 2.58E-75 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 SUPERFAMILY SSF47336 379 468 9.68E-13 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 SUPERFAMILY SSF53335 126 327 4.26E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Pfam PF08242 Methyltransferase domain 165 269 4.4E-16 T 12-10-2018 IPR013217 Methyltransferase type 12 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 SUPERFAMILY SSF47336 1370 1447 3.27E-11 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 771 888 1.0E-33 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1725 1839 1.6E-33 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Gene3D G3DSA:3.30.70.3290 962 1066 4.6E-178 T 12-10-2018 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 SUPERFAMILY SSF47336 2091 2161 5.76E-10 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Gene3D G3DSA:3.10.129.110 1088 1342 8.5E-39 T 12-10-2018 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 SMART SM00825 Beta-ketoacyl synthase 515 948 1.4E-117 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 SMART SM00825 Beta-ketoacyl synthase 1487 1901 1.8E-126 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Pfam PF00975 Thioesterase domain 2178 2452 1.8E-44 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 SUPERFAMILY SSF53474 2163 2440 4.42E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 SUPERFAMILY SSF53901 509 942 1.48E-65 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Pfam PF14765 Polyketide synthase dehydratase 1095 1346 8.4E-25 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Gene3D G3DSA:3.30.70.3050 1954 2055 2.3E-191 T 12-10-2018 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Gene3D G3DSA:1.10.1200.10 1360 1446 2.1E-14 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Gene3D G3DSA:1.10.1200.10 374 455 3.4E-17 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1486 1715 5.2E-73 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 513 763 9.0E-67 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 677 693 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Gene3D G3DSA:3.40.47.10 515 1075 4.6E-178 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Pfam PF00550 Phosphopantetheine attachment site 383 447 2.9E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Pfam PF00550 Phosphopantetheine attachment site 1375 1439 3.2E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1790 b24b23b12c22bc0387031711838e79d3 2481 Pfam PF00550 Phosphopantetheine attachment site 2092 2149 2.5E-8 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 7.7E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 7.7E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 7.7E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 7.7E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 7.7E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 7.7E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 7.7E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 SUPERFAMILY SSF53223 1 121 2.78E-40 T 12-10-2018 BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 Gene3D G3DSA:3.40.50.720 6 258 7.5E-118 T 12-10-2018 BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 Gene3D G3DSA:3.40.50.10860 8 276 7.5E-118 T 12-10-2018 BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 SUPERFAMILY SSF51735 122 280 2.49E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 40.297 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 6.1E-40 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BAMF_2335 1fb5a486cc71b4703f33a9f38fe7c968 283 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 280 2.0E-75 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BAMF_1419 16baf0f3d4b102d4b97cc9f057ff33ce 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 1.9E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1419 16baf0f3d4b102d4b97cc9f057ff33ce 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 1.9E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1419 16baf0f3d4b102d4b97cc9f057ff33ce 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 1.9E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1419 16baf0f3d4b102d4b97cc9f057ff33ce 154 ProSitePatterns PS01117 MarR-type HTH domain signature. 73 107 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BAMF_1419 16baf0f3d4b102d4b97cc9f057ff33ce 154 Pfam PF01047 MarR family 42 99 8.6E-19 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1419 16baf0f3d4b102d4b97cc9f057ff33ce 154 Gene3D G3DSA:1.10.10.10 4 145 2.0E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1419 16baf0f3d4b102d4b97cc9f057ff33ce 154 SMART SM00347 34 134 6.0E-33 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1419 16baf0f3d4b102d4b97cc9f057ff33ce 154 SUPERFAMILY SSF46785 13 144 8.2E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 Pfam PF00158 Sigma-54 interaction domain 368 535 3.1E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 392 405 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 119 227 1.3E-12 T 12-10-2018 IPR000014 PAS domain BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 235 349 2.8E-17 T 12-10-2018 IPR000014 PAS domain BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 Gene3D G3DSA:3.40.50.720 2 81 4.3E-7 T 12-10-2018 BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 Pfam PF02954 Bacterial regulatory protein, Fis family 641 681 4.4E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 Gene3D G3DSA:3.30.450.20 104 219 1.9E-19 T 12-10-2018 BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 Gene3D G3DSA:3.30.450.20 223 339 5.0E-16 T 12-10-2018 BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 SMART SM00382 388 532 7.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 SUPERFAMILY SSF46689 631 683 1.52E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 455 470 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 SUPERFAMILY SSF55785 104 215 7.15E-16 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 SMART SM00091 117 183 5.8E-9 T 12-10-2018 IPR000014 PAS domain BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 SMART SM00091 236 301 1.9E-5 T 12-10-2018 IPR000014 PAS domain BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 SUPERFAMILY SSF55785 217 336 1.92E-14 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 Pfam PF00989 PAS fold 237 339 5.6E-14 T 12-10-2018 IPR013767 PAS fold GO:0006355 BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 Pfam PF00989 PAS fold 120 218 1.2E-15 T 12-10-2018 IPR013767 PAS fold GO:0006355 BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 Gene3D G3DSA:1.10.8.60 540 619 4.2E-22 T 12-10-2018 BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 582 591 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 SUPERFAMILY SSF52540 367 601 2.06E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 Gene3D G3DSA:3.40.50.300 355 539 9.5E-65 T 12-10-2018 BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 647 664 5.3E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 664 684 5.3E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 SUPERFAMILY SSF51735 1 98 4.1E-14 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2307 b8cfbfac031bd69efbb0c2e87827ed8d 689 Gene3D G3DSA:1.10.10.60 632 685 1.7E-16 T 12-10-2018 BAMF_3285 71a4d632d060ec44e060145faed5969e 280 Gene3D G3DSA:3.90.550.10 2 246 1.4E-59 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3285 71a4d632d060ec44e060145faed5969e 280 Pfam PF00535 Glycosyl transferase family 2 10 139 4.5E-32 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BAMF_3285 71a4d632d060ec44e060145faed5969e 280 SUPERFAMILY SSF53448 7 227 1.34E-55 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3615 b6d6e157b94ff18a22708f1ac0dc63cd 154 Gene3D G3DSA:2.60.40.3490 28 154 1.6E-41 T 12-10-2018 IPR038480 YuaB-like superfamily BAMF_3615 b6d6e157b94ff18a22708f1ac0dc63cd 154 ProDom PD034110 YWEA MEMBRANE YUAB TRANSMEMBRANE ORF-1 24 154 2.0E-59 T 12-10-2018 IPR034650 YuaB-like BAMF_3681 5ac324ba1fbb4ad65a62b305ed81a38b 49 Pfam PF12459 D-Ala-teichoic acid biosynthesis protein 9 49 2.3E-16 T 12-10-2018 IPR021008 Protein of unknown function DUF3687 BAMF_1436 644135dcc77cd2548bbc9eb18d819ae0 165 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 5 75 5.6E-6 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BAMF_1436 644135dcc77cd2548bbc9eb18d819ae0 165 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 128 134 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BAMF_1436 644135dcc77cd2548bbc9eb18d819ae0 165 SUPERFAMILY SSF53155 4 83 2.75E-12 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BAMF_1436 644135dcc77cd2548bbc9eb18d819ae0 165 Gene3D G3DSA:1.10.10.10 77 163 8.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1436 644135dcc77cd2548bbc9eb18d819ae0 165 SUPERFAMILY SSF46767 77 160 6.28E-29 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 BAMF_1436 644135dcc77cd2548bbc9eb18d819ae0 165 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 159 1.0E-28 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BAMF_1436 644135dcc77cd2548bbc9eb18d819ae0 165 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 5 159 36.845 T 12-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 BAMF_1436 644135dcc77cd2548bbc9eb18d819ae0 165 Gene3D G3DSA:3.30.160.70 1 73 1.4E-12 T 12-10-2018 BAMF_1436 644135dcc77cd2548bbc9eb18d819ae0 165 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 158 1.7E-34 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BAMF_1230 4c13dc2d55c11cea9110420567db67e0 132 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 52 76 - T 12-10-2018 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 BAMF_1230 4c13dc2d55c11cea9110420567db67e0 132 Gene3D G3DSA:1.10.490.10 1 132 6.6E-56 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 BAMF_1230 4c13dc2d55c11cea9110420567db67e0 132 SUPERFAMILY SSF46458 8 124 3.6E-38 T 12-10-2018 IPR009050 Globin-like superfamily BAMF_1230 4c13dc2d55c11cea9110420567db67e0 132 Pfam PF01152 Bacterial-like globin 9 121 2.8E-31 T 12-10-2018 IPR001486 Truncated hemoglobin GO:0019825 BAMF_2862 0b2d12bd7d094d93c605433edc78ad07 578 Gene3D G3DSA:3.40.50.970 377 578 2.2E-72 T 12-10-2018 BAMF_2862 0b2d12bd7d094d93c605433edc78ad07 578 Gene3D G3DSA:3.40.50.970 1 195 8.5E-69 T 12-10-2018 BAMF_2862 0b2d12bd7d094d93c605433edc78ad07 578 Gene3D G3DSA:3.40.50.1220 196 375 6.4E-63 T 12-10-2018 BAMF_2862 0b2d12bd7d094d93c605433edc78ad07 578 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 430 548 4.2E-7 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BAMF_2862 0b2d12bd7d094d93c605433edc78ad07 578 SUPERFAMILY SSF52518 382 570 5.38E-30 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_2862 0b2d12bd7d094d93c605433edc78ad07 578 Pfam PF16582 Middle domain of thiamine pyrophosphate 217 400 8.1E-18 T 12-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BAMF_2862 0b2d12bd7d094d93c605433edc78ad07 578 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 9 442 6.5E-159 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BAMF_2862 0b2d12bd7d094d93c605433edc78ad07 578 PIRSF PIRSF004983 1 575 4.7E-208 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BAMF_2862 0b2d12bd7d094d93c605433edc78ad07 578 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 2 568 37.782 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BAMF_2862 0b2d12bd7d094d93c605433edc78ad07 578 SUPERFAMILY SSF52518 13 185 3.15E-33 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_2862 0b2d12bd7d094d93c605433edc78ad07 578 SUPERFAMILY SSF52467 165 368 2.58E-11 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BAMF_2862 0b2d12bd7d094d93c605433edc78ad07 578 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 176 5.9E-36 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BAMF_3452 120237abe0a968611687ca29ba903d92 228 Pfam PF01613 Flavin reductase like domain 45 192 2.2E-16 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 BAMF_3452 120237abe0a968611687ca29ba903d92 228 SMART SM00903 42 200 1.7E-25 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 BAMF_3452 120237abe0a968611687ca29ba903d92 228 Gene3D G3DSA:2.30.110.10 23 228 2.3E-60 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BAMF_3452 120237abe0a968611687ca29ba903d92 228 SUPERFAMILY SSF50475 22 223 4.56E-39 T 12-10-2018 BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 SUPERFAMILY SSF52374 1 640 3.84E-154 T 12-10-2018 BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 Gene3D G3DSA:1.10.730.20 632 918 1.6E-90 T 12-10-2018 BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 553 562 1.8E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 391 406 1.8E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 519 532 1.8E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 229 252 1.8E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 1.8E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 SUPERFAMILY SSF50677 203 393 3.03E-63 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 Gene3D G3DSA:3.90.740.10 194 398 2.0E-263 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 SUPERFAMILY SSF47323 644 917 7.29E-73 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 Gene3D G3DSA:3.40.50.620 24 621 2.0E-263 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 630 2.5E-221 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 916 20.621 T 12-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 Pfam PF08264 Anticodon-binding domain of tRNA 677 830 8.4E-31 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BAMF_1614 2693ee15a17dcff2ac6c7a159df719ee 921 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 832 0.0 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:2.30.38.10 1821 1898 7.5E-32 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2040 2055 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 ProSitePatterns PS00455 Putative AMP-binding domain signature. 602 613 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SUPERFAMILY SSF47336 2008 2082 7.59E-20 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:3.30.559.30 214 438 5.7E-38 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SUPERFAMILY SSF52777 8 185 1.67E-27 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1653 1664 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 3427 3580 6.9E-51 T 12-10-2018 IPR010060 Non-ribosomal peptide synthase BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1001 1016 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:3.30.300.30 862 965 1.4E-31 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1533 1932 2.0E-126 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 487 891 6.4E-128 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2572 2963 1.3E-121 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:3.30.559.10 1064 1420 3.1E-151 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:3.30.559.10 3115 3288 5.3E-59 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SUPERFAMILY SSF52777 1234 1475 2.33E-63 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:1.10.1200.10 3031 3114 2.7E-25 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:1.10.1200.10 2002 2091 2.4E-26 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Pfam PF00501 AMP-binding enzyme 2551 2939 5.1E-97 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Pfam PF00501 AMP-binding enzyme 466 867 2.1E-103 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Pfam PF00501 AMP-binding enzyme 1512 1908 6.4E-98 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:3.40.50.12780 452 861 1.5E-126 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:3.40.50.12780 2537 2933 1.3E-125 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2696 2707 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SUPERFAMILY SSF47336 970 1041 1.44E-19 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SUPERFAMILY SSF52777 3308 3556 1.89E-36 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SMART SM00823 Phosphopantetheine attachment site 977 1046 1.3E-4 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SMART SM00823 Phosphopantetheine attachment site 2016 2085 0.0064 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SMART SM00823 Phosphopantetheine attachment site 3045 3113 0.0013 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:3.40.50.980 1517 1820 1.0E-96 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:3.30.559.30 2270 2515 8.9E-145 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SUPERFAMILY SSF56801 1471 2028 1.19E-150 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:3.30.559.10 2102 2460 8.9E-145 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:3.30.559.30 1232 1477 3.1E-151 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:3.30.559.10 8 208 3.1E-38 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SUPERFAMILY SSF52777 191 434 9.34E-43 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:3.30.300.30 1902 2001 7.9E-34 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SUPERFAMILY SSF56801 2510 3058 2.22E-151 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Pfam PF13193 AMP-binding enzyme C-terminal domain 875 950 5.8E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Pfam PF13193 AMP-binding enzyme C-terminal domain 1916 1989 1.9E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Pfam PF13193 AMP-binding enzyme C-terminal domain 2947 3019 3.7E-11 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SUPERFAMILY SSF52777 3119 3293 2.11E-36 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Pfam PF00668 Condensation domain 4 446 7.1E-111 T 12-10-2018 IPR001242 Condensation domain BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Pfam PF00668 Condensation domain 1060 1488 1.5E-139 T 12-10-2018 IPR001242 Condensation domain BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Pfam PF00668 Condensation domain 2098 2531 1.7E-140 T 12-10-2018 IPR001242 Condensation domain BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Pfam PF00668 Condensation domain 3123 3572 1.2E-124 T 12-10-2018 IPR001242 Condensation domain BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:3.30.559.30 3289 3559 6.8E-73 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Pfam PF00550 Phosphopantetheine attachment site 979 1041 2.3E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Pfam PF00550 Phosphopantetheine attachment site 2017 2081 1.9E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Pfam PF00550 Phosphopantetheine attachment site 3048 3109 2.3E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SUPERFAMILY SSF52777 2272 2519 1.06E-59 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3069 3084 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SUPERFAMILY SSF56801 424 989 1.31E-150 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SUPERFAMILY SSF52777 2096 2267 6.45E-41 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:3.30.300.30 2934 3030 1.9E-32 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:1.10.1200.10 966 1048 1.5E-25 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 Gene3D G3DSA:3.40.50.980 1534 1668 1.0E-96 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SUPERFAMILY SSF52777 1058 1247 3.45E-43 T 12-10-2018 BAMF_0312 4b985f7a17acb03ded360c2b9984aa6e 3584 SUPERFAMILY SSF47336 3038 3110 5.37E-20 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_0527 a893786fa4c3ffada51bcda811da8901 279 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 139 1.3E-20 T 12-10-2018 IPR016188 PurM-like, N-terminal domain BAMF_0527 a893786fa4c3ffada51bcda811da8901 279 SUPERFAMILY SSF56042 144 273 3.89E-25 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BAMF_0527 a893786fa4c3ffada51bcda811da8901 279 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 273 2.7E-99 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BAMF_0527 a893786fa4c3ffada51bcda811da8901 279 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 278 24.712 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BAMF_0527 a893786fa4c3ffada51bcda811da8901 279 SUPERFAMILY SSF55326 3 143 1.15E-32 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BAMF_0527 a893786fa4c3ffada51bcda811da8901 279 Gene3D G3DSA:3.30.1330.10 1 145 1.1E-41 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BAMF_0527 a893786fa4c3ffada51bcda811da8901 279 PIRSF PIRSF005303 1 276 9.2E-93 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BAMF_0527 a893786fa4c3ffada51bcda811da8901 279 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 249 1.1E-6 T 12-10-2018 IPR010918 PurM-like, C-terminal domain BAMF_0527 a893786fa4c3ffada51bcda811da8901 279 Gene3D G3DSA:3.90.650.10 146 276 2.2E-35 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BAMF_0876 e907d7d0cf918d7668af5e596dc03cc9 176 Pfam PF04167 Protein of unknown function (DUF402) 60 124 5.5E-17 T 12-10-2018 IPR007295 Domain of unknown function DUF402 BAMF_0876 e907d7d0cf918d7668af5e596dc03cc9 176 Gene3D G3DSA:2.40.380.10 14 169 3.8E-11 T 12-10-2018 IPR035930 FomD-like superfamily BAMF_0876 e907d7d0cf918d7668af5e596dc03cc9 176 Hamap MF_01568 UPF0374 protein . 1 175 49.453 T 12-10-2018 IPR016882 Uncharacterised protein family UPF0374 BAMF_0876 e907d7d0cf918d7668af5e596dc03cc9 176 SUPERFAMILY SSF159234 3 171 2.22E-32 T 12-10-2018 IPR035930 FomD-like superfamily BAMF_0876 e907d7d0cf918d7668af5e596dc03cc9 176 PIRSF PIRSF028345 1 176 2.1E-79 T 12-10-2018 IPR016882 Uncharacterised protein family UPF0374 BAMF_0178 a98c966943128417530469c34f1ec133 273 SUPERFAMILY SSF143597 40 239 1.05E-72 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily BAMF_0178 a98c966943128417530469c34f1ec133 273 Gene3D G3DSA:3.40.1700.10 101 254 3.9E-64 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily BAMF_0178 a98c966943128417530469c34f1ec133 273 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 118 235 1.2E-44 T 12-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal BAMF_0178 a98c966943128417530469c34f1ec133 273 PIRSF PIRSF004793 2 268 1.1E-99 T 12-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 BAMF_0178 a98c966943128417530469c34f1ec133 273 Hamap MF_01499 Diadenylate cyclase [dacA]. 1 254 34.957 T 12-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 BAMF_0178 a98c966943128417530469c34f1ec133 273 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 3 256 1.9E-114 T 12-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 BAMF_3041 ccdf2036003ef1a77af380e9705dcfad 283 Gene3D G3DSA:3.20.20.410 1 282 7.5E-97 T 12-10-2018 IPR036520 UPF0759 superfamily BAMF_3041 ccdf2036003ef1a77af380e9705dcfad 283 Pfam PF01904 Protein of unknown function DUF72 16 265 9.2E-60 T 12-10-2018 IPR002763 Protein of unknown function DUF72 BAMF_3041 ccdf2036003ef1a77af380e9705dcfad 283 SUPERFAMILY SSF117396 2 269 6.28E-86 T 12-10-2018 IPR036520 UPF0759 superfamily BAMF_0610 f27e9941df7fe6e9f0d6f5b81c6b21dc 228 Pfam PF04012 PspA/IM30 family 3 220 1.5E-39 T 12-10-2018 IPR007157 PspA/IM30 BAMF_1091 69b26c5d5024b41dc3cb4df3684d8b80 113 ProDom PD073069 YHAI 3D-STRUCTURE 10 113 7.0E-39 T 12-10-2018 IPR015058 Protein of unknown function DUF1878 BAMF_1091 69b26c5d5024b41dc3cb4df3684d8b80 113 Pfam PF08963 Protein of unknown function (DUF1878) 1 110 3.2E-45 T 12-10-2018 IPR015058 Protein of unknown function DUF1878 BAMF_1091 69b26c5d5024b41dc3cb4df3684d8b80 113 SUPERFAMILY SSF109915 2 113 1.31E-48 T 12-10-2018 IPR035945 YhaI-like superfamily BAMF_1091 69b26c5d5024b41dc3cb4df3684d8b80 113 Gene3D G3DSA:1.10.3750.10 1 113 3.3E-45 T 12-10-2018 IPR035945 YhaI-like superfamily BAMF_3319 b7e3b6c19692f864376f7ae7e12ce381 157 PRINTS PR00117 Barnase signature 115 134 2.1E-55 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BAMF_3319 b7e3b6c19692f864376f7ae7e12ce381 157 PRINTS PR00117 Barnase signature 137 155 2.1E-55 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BAMF_3319 b7e3b6c19692f864376f7ae7e12ce381 157 PRINTS PR00117 Barnase signature 94 112 2.1E-55 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BAMF_3319 b7e3b6c19692f864376f7ae7e12ce381 157 PRINTS PR00117 Barnase signature 54 71 2.1E-55 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BAMF_3319 b7e3b6c19692f864376f7ae7e12ce381 157 PRINTS PR00117 Barnase signature 74 91 2.1E-55 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BAMF_3319 b7e3b6c19692f864376f7ae7e12ce381 157 Gene3D G3DSA:3.10.450.30 42 157 4.5E-48 T 12-10-2018 BAMF_3319 b7e3b6c19692f864376f7ae7e12ce381 157 SUPERFAMILY SSF53933 50 157 8.22E-39 T 12-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 BAMF_3319 b7e3b6c19692f864376f7ae7e12ce381 157 Pfam PF00545 ribonuclease 67 154 7.0E-23 T 12-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 BAMF_3319 b7e3b6c19692f864376f7ae7e12ce381 157 PIRSF PIRSF001013 8 157 1.7E-77 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BAMF_1355 4c89dc4ac1f96d13900540f34f0270f9 1422 Gene3D G3DSA:1.10.530.10 1190 1297 1.2E-7 T 12-10-2018 BAMF_1355 4c89dc4ac1f96d13900540f34f0270f9 1422 SUPERFAMILY SSF53955 1205 1277 4.3E-12 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BAMF_1355 4c89dc4ac1f96d13900540f34f0270f9 1422 Pfam PF01464 Transglycosylase SLT domain 1194 1316 1.2E-20 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 BAMF_2788 a6868a40e308b75e613652dc81b30463 150 Pfam PF00390 Malic enzyme, N-terminal domain 82 146 5.7E-18 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BAMF_2788 a6868a40e308b75e613652dc81b30463 150 SUPERFAMILY SSF53223 4 137 1.65E-44 T 12-10-2018 BAMF_2788 a6868a40e308b75e613652dc81b30463 150 SMART SM01274 82 147 6.3E-5 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BAMF_2788 a6868a40e308b75e613652dc81b30463 150 Gene3D G3DSA:3.40.50.10380 16 150 1.3E-44 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 BAMF_3086 92bcce763eb67cba372b7d8e7fb3346f 399 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 6 382 2.4E-52 T 12-10-2018 IPR024455 Phage capsid BAMF_3086 92bcce763eb67cba372b7d8e7fb3346f 399 SUPERFAMILY SSF56563 125 383 1.83E-25 T 12-10-2018 BAMF_3086 92bcce763eb67cba372b7d8e7fb3346f 399 Pfam PF05065 Phage capsid family 135 377 2.9E-17 T 12-10-2018 IPR024455 Phage capsid BAMF_1666 0fa613a86a00aa3c9127b7710a8180a5 1186 SUPERFAMILY SSF52540 1 1163 1.0E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1666 0fa613a86a00aa3c9127b7710a8180a5 1186 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1180 24.723 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 BAMF_1666 0fa613a86a00aa3c9127b7710a8180a5 1186 Gene3D G3DSA:3.40.50.300 1 243 2.2E-59 T 12-10-2018 BAMF_1666 0fa613a86a00aa3c9127b7710a8180a5 1186 Gene3D G3DSA:3.40.50.300 951 1186 8.1E-53 T 12-10-2018 BAMF_1666 0fa613a86a00aa3c9127b7710a8180a5 1186 SMART SM00968 518 637 3.0E-41 T 12-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 BAMF_1666 0fa613a86a00aa3c9127b7710a8180a5 1186 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1178 0.0 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 BAMF_1666 0fa613a86a00aa3c9127b7710a8180a5 1186 Gene3D G3DSA:3.30.70.1620 578 667 1.9E-66 T 12-10-2018 BAMF_1666 0fa613a86a00aa3c9127b7710a8180a5 1186 Gene3D G3DSA:1.20.1060.20 495 679 1.9E-66 T 12-10-2018 BAMF_1666 0fa613a86a00aa3c9127b7710a8180a5 1186 SUPERFAMILY SSF75553 484 685 1.31E-55 T 12-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 BAMF_1666 0fa613a86a00aa3c9127b7710a8180a5 1186 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1171 8.9E-74 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal BAMF_1666 0fa613a86a00aa3c9127b7710a8180a5 1186 PIRSF PIRSF005719 1 1186 0.0 T 12-10-2018 IPR024704 Structural maintenance of chromosomes protein BAMF_1666 0fa613a86a00aa3c9127b7710a8180a5 1186 SUPERFAMILY SSF57997 670 863 5.04E-6 T 12-10-2018 BAMF_1666 0fa613a86a00aa3c9127b7710a8180a5 1186 Pfam PF06470 SMC proteins Flexible Hinge Domain 519 637 1.2E-29 T 12-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 BAMF_2999 f78aa9e3e9f014b0a42f0b6df12ac56c 197 Gene3D G3DSA:1.10.1760.20 1 190 5.1E-43 T 12-10-2018 BAMF_2999 f78aa9e3e9f014b0a42f0b6df12ac56c 197 PIRSF PIRSF016661 1 192 5.1E-42 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 BAMF_2999 f78aa9e3e9f014b0a42f0b6df12ac56c 197 Pfam PF02632 BioY family 38 183 7.8E-29 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 BAMF_3194 4502d4dc24bf87af211444195c354c06 266 Pfam PF13688 Metallo-peptidase family M12 98 239 2.7E-27 T 12-10-2018 BAMF_3194 4502d4dc24bf87af211444195c354c06 266 SUPERFAMILY SSF55486 99 256 2.53E-20 T 12-10-2018 BAMF_3194 4502d4dc24bf87af211444195c354c06 266 Gene3D G3DSA:3.40.390.10 84 261 2.7E-14 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BAMF_0206 9f793cb3f62e64d17c1f680fe334e3fc 80 ProDom PD060054 MEMBRANE SPANNING TRANSMEMBRANE YBEF 2 73 4.0E-17 T 12-10-2018 IPR020258 Uncharacterised protein family YbeF BAMF_0206 9f793cb3f62e64d17c1f680fe334e3fc 80 Pfam PF10852 Protein of unknown function (DUF2651) 8 78 1.3E-20 T 12-10-2018 IPR020258 Uncharacterised protein family YbeF BAMF_2197 84d4b65e21261b2af4870347c9137b35 424 Gene3D G3DSA:1.10.8.1210 378 424 2.5E-17 T 12-10-2018 BAMF_2197 84d4b65e21261b2af4870347c9137b35 424 Gene3D G3DSA:3.40.50.720 198 351 5.6E-146 T 12-10-2018 BAMF_2197 84d4b65e21261b2af4870347c9137b35 424 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 191 422 2.2E-77 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2197 84d4b65e21261b2af4870347c9137b35 424 Gene3D G3DSA:3.40.50.10860 43 197 5.6E-146 T 12-10-2018 BAMF_2197 84d4b65e21261b2af4870347c9137b35 424 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 47 173 1.1E-53 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2197 84d4b65e21261b2af4870347c9137b35 424 Gene3D G3DSA:1.10.8.1210 18 352 5.6E-146 T 12-10-2018 BAMF_2197 84d4b65e21261b2af4870347c9137b35 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 182 204 1.0E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2197 84d4b65e21261b2af4870347c9137b35 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 224 244 1.0E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2197 84d4b65e21261b2af4870347c9137b35 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 102 116 1.0E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2197 84d4b65e21261b2af4870347c9137b35 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 350 361 1.0E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2197 84d4b65e21261b2af4870347c9137b35 424 SMART SM00839 193 422 5.4E-93 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2197 84d4b65e21261b2af4870347c9137b35 424 SUPERFAMILY SSF51735 191 423 2.06E-77 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2197 84d4b65e21261b2af4870347c9137b35 424 PIRSF PIRSF000185 12 424 1.1E-170 T 12-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 BAMF_2197 84d4b65e21261b2af4870347c9137b35 424 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 110 123 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2197 84d4b65e21261b2af4870347c9137b35 424 SUPERFAMILY SSF53223 15 193 3.01E-65 T 12-10-2018 BAMF_2456 351e90b969f6fb49595dedb49d5a006c 189 TIGRFAM TIGR02571 ComEB: ComE operon protein 2 2 150 1.0E-81 T 12-10-2018 IPR013404 Competence operon E, ComEB BAMF_2456 351e90b969f6fb49595dedb49d5a006c 189 SUPERFAMILY SSF53927 8 140 6.96E-40 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BAMF_2456 351e90b969f6fb49595dedb49d5a006c 189 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 116 3.4E-28 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BAMF_2456 351e90b969f6fb49595dedb49d5a006c 189 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 70 106 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BAMF_2456 351e90b969f6fb49595dedb49d5a006c 189 Gene3D G3DSA:3.40.140.10 2 149 1.1E-47 T 12-10-2018 BAMF_2456 351e90b969f6fb49595dedb49d5a006c 189 PIRSF PIRSF006019 1 151 1.2E-63 T 12-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BAMF_3253 5330530c7c9635ed2899ea0e250c435c 511 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 299 5.7E-87 T 12-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3253 5330530c7c9635ed2899ea0e250c435c 511 Pfam PF01676 Metalloenzyme superfamily 4 499 2.9E-79 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 BAMF_3253 5330530c7c9635ed2899ea0e250c435c 511 SUPERFAMILY SSF53649 4 509 4.89E-76 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BAMF_3253 5330530c7c9635ed2899ea0e250c435c 511 Gene3D G3DSA:3.40.720.10 5 509 2.9E-235 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BAMF_3253 5330530c7c9635ed2899ea0e250c435c 511 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 509 2.5E-215 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3253 5330530c7c9635ed2899ea0e250c435c 511 Gene3D G3DSA:3.40.1450.10 77 312 2.9E-235 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3253 5330530c7c9635ed2899ea0e250c435c 511 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 510 50.672 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3253 5330530c7c9635ed2899ea0e250c435c 511 PIRSF PIRSF001492 1 511 2.0E-209 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_3253 5330530c7c9635ed2899ea0e250c435c 511 SUPERFAMILY SSF64158 77 310 2.22E-93 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BAMF_2563 317fea5a3e874703e90593544b6d95ee 422 Gene3D G3DSA:3.40.50.300 1 147 3.8E-38 T 12-10-2018 BAMF_2563 317fea5a3e874703e90593544b6d95ee 422 Gene3D G3DSA:1.10.3710.10 330 422 6.5E-25 T 12-10-2018 BAMF_2563 317fea5a3e874703e90593544b6d95ee 422 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 125 9.8E-16 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 BAMF_2563 317fea5a3e874703e90593544b6d95ee 422 Pfam PF12002 MgsA AAA+ ATPase C terminal 252 417 1.5E-67 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal BAMF_2563 317fea5a3e874703e90593544b6d95ee 422 SUPERFAMILY SSF52540 2 228 1.61E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2563 317fea5a3e874703e90593544b6d95ee 422 Gene3D G3DSA:1.10.8.60 149 224 1.3E-19 T 12-10-2018 BAMF_2563 317fea5a3e874703e90593544b6d95ee 422 Gene3D G3DSA:1.20.272.10 227 329 2.0E-42 T 12-10-2018 BAMF_2563 317fea5a3e874703e90593544b6d95ee 422 SMART SM00382 37 149 5.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2563 317fea5a3e874703e90593544b6d95ee 422 Pfam PF16193 AAA C-terminal domain 172 251 2.6E-27 T 12-10-2018 IPR032423 AAA C-terminal domain BAMF_2563 317fea5a3e874703e90593544b6d95ee 422 SUPERFAMILY SSF48019 237 420 4.36E-73 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BAMF_2563 317fea5a3e874703e90593544b6d95ee 422 Pfam PF03215 Rad17 cell cycle checkpoint protein 141 204 2.4E-5 T 12-10-2018 BAMF_0994 36e007f35787b82d8341dc07c8ec2b3c 631 SUPERFAMILY SSF52540 68 456 1.3E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0994 36e007f35787b82d8341dc07c8ec2b3c 631 Pfam PF08298 PrkA AAA domain 22 371 2.4E-158 T 12-10-2018 IPR013153 PrkA AAA domain BAMF_0994 36e007f35787b82d8341dc07c8ec2b3c 631 PIRSF PIRSF000549 1 631 4.9E-269 T 12-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 BAMF_0994 36e007f35787b82d8341dc07c8ec2b3c 631 SMART SM00763 21 371 2.1E-197 T 12-10-2018 IPR013153 PrkA AAA domain BAMF_0994 36e007f35787b82d8341dc07c8ec2b3c 631 Pfam PF06798 PrkA serine protein kinase C-terminal domain 375 624 1.7E-92 T 12-10-2018 IPR010650 PrkA C-terminal domain BAMF_0814 ad3312e93191d76a974eeb3a1c879c6b 304 ProSitePatterns PS00672 Serine proteases, V8 family, histidine active site. 123 137 - T 12-10-2018 IPR028301 Serine proteases, V8 family, histidine active site BAMF_0814 ad3312e93191d76a974eeb3a1c879c6b 304 SUPERFAMILY SSF50494 89 298 7.5E-32 T 12-10-2018 IPR009003 Peptidase S1, PA clan BAMF_0814 ad3312e93191d76a974eeb3a1c879c6b 304 ProSitePatterns PS00673 Serine proteases, V8 family, serine active site. 253 263 - T 12-10-2018 IPR000126 Serine proteases, V8 family, serine active site GO:0006508|GO:0008236 BAMF_0814 ad3312e93191d76a974eeb3a1c879c6b 304 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 133 138 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 BAMF_0814 ad3312e93191d76a974eeb3a1c879c6b 304 Gene3D G3DSA:2.40.10.10 89 280 4.3E-57 T 12-10-2018 BAMF_0814 ad3312e93191d76a974eeb3a1c879c6b 304 Gene3D G3DSA:2.40.10.10 102 203 4.3E-57 T 12-10-2018 BAMF_0814 ad3312e93191d76a974eeb3a1c879c6b 304 PRINTS PR00839 V8 serine protease family signature 122 139 1.4E-29 T 12-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BAMF_0814 ad3312e93191d76a974eeb3a1c879c6b 304 PRINTS PR00839 V8 serine protease family signature 152 164 1.4E-29 T 12-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BAMF_0814 ad3312e93191d76a974eeb3a1c879c6b 304 PRINTS PR00839 V8 serine protease family signature 214 227 1.4E-29 T 12-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BAMF_0814 ad3312e93191d76a974eeb3a1c879c6b 304 PRINTS PR00839 V8 serine protease family signature 247 263 1.4E-29 T 12-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BAMF_0814 ad3312e93191d76a974eeb3a1c879c6b 304 PRINTS PR00839 V8 serine protease family signature 268 280 1.4E-29 T 12-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BAMF_0814 ad3312e93191d76a974eeb3a1c879c6b 304 PRINTS PR00839 V8 serine protease family signature 92 109 1.4E-29 T 12-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BAMF_0814 ad3312e93191d76a974eeb3a1c879c6b 304 Pfam PF00089 Trypsin 99 284 2.6E-20 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BAMF_3467 0c1db01a49972cac84b3e6f9446a493f 441 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 313 412 2.1E-27 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BAMF_3467 0c1db01a49972cac84b3e6f9446a493f 441 SMART SM00984 313 415 5.8E-40 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BAMF_3467 0c1db01a49972cac84b3e6f9446a493f 441 SUPERFAMILY SSF51735 1 188 2.07E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3467 0c1db01a49972cac84b3e6f9446a493f 441 SUPERFAMILY SSF52413 299 425 8.11E-33 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 BAMF_3467 0c1db01a49972cac84b3e6f9446a493f 441 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 411 5.0E-142 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BAMF_3467 0c1db01a49972cac84b3e6f9446a493f 441 PIRSF PIRSF000124 1 430 3.8E-142 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BAMF_3467 0c1db01a49972cac84b3e6f9446a493f 441 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 290 8.8E-39 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BAMF_3467 0c1db01a49972cac84b3e6f9446a493f 441 Gene3D G3DSA:3.40.50.720 1 198 4.5E-74 T 12-10-2018 BAMF_3467 0c1db01a49972cac84b3e6f9446a493f 441 PIRSF PIRSF500134 1 433 7.8E-179 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 BAMF_3467 0c1db01a49972cac84b3e6f9446a493f 441 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 182 2.4E-69 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BAMF_3467 0c1db01a49972cac84b3e6f9446a493f 441 SUPERFAMILY SSF48179 197 295 3.06E-32 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_3467 0c1db01a49972cac84b3e6f9446a493f 441 Gene3D G3DSA:1.20.5.100 199 228 5.4E-18 T 12-10-2018 BAMF_3467 0c1db01a49972cac84b3e6f9446a493f 441 Gene3D G3DSA:3.40.50.720 229 440 1.7E-71 T 12-10-2018 BAMF_1951 42530d503d78ea2c4ff98707818a66a4 1519 Pfam PF04898 Glutamate synthase central domain 464 740 8.8E-115 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 BAMF_1951 42530d503d78ea2c4ff98707818a66a4 1519 Gene3D G3DSA:3.60.20.10 22 552 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BAMF_1951 42530d503d78ea2c4ff98707818a66a4 1519 Pfam PF00310 Glutamine amidotransferases class-II 22 438 1.0E-187 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BAMF_1951 42530d503d78ea2c4ff98707818a66a4 1519 SUPERFAMILY SSF69336 1214 1478 1.7E-90 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 BAMF_1951 42530d503d78ea2c4ff98707818a66a4 1519 Gene3D G3DSA:2.160.20.60 1216 1490 2.0E-106 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 BAMF_1951 42530d503d78ea2c4ff98707818a66a4 1519 Gene3D G3DSA:3.20.20.70 443 798 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_1951 42530d503d78ea2c4ff98707818a66a4 1519 SUPERFAMILY SSF56235 22 441 3.54E-152 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BAMF_1951 42530d503d78ea2c4ff98707818a66a4 1519 Pfam PF01645 Conserved region in glutamate synthase 799 1167 9.7E-163 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 BAMF_1951 42530d503d78ea2c4ff98707818a66a4 1519 SUPERFAMILY SSF51395 459 1204 4.48E-264 T 12-10-2018 BAMF_1951 42530d503d78ea2c4ff98707818a66a4 1519 Gene3D G3DSA:3.20.20.70 490 1183 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_1951 42530d503d78ea2c4ff98707818a66a4 1519 Pfam PF01493 GXGXG motif 1245 1433 7.4E-83 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 BAMF_0336 53561812b88b6589989f4828f59ddc14 216 Gene3D G3DSA:1.10.3720.10 1 212 2.0E-56 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_0336 53561812b88b6589989f4828f59ddc14 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 105 9.2E-27 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BAMF_0336 53561812b88b6589989f4828f59ddc14 216 SUPERFAMILY SSF161098 6 196 6.15E-44 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_0336 53561812b88b6589989f4828f59ddc14 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 211 9.9E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_3686 e690929fcefb8cff06eadd41f0652e33 362 ProSitePatterns PS00770 Aminotransferases class-IV signature. 232 261 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 BAMF_3686 e690929fcefb8cff06eadd41f0652e33 362 Gene3D G3DSA:3.30.470.10 24 351 2.4E-137 T 12-10-2018 BAMF_3686 e690929fcefb8cff06eadd41f0652e33 362 Pfam PF01063 Amino-transferase class IV 69 311 2.7E-34 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BAMF_3686 e690929fcefb8cff06eadd41f0652e33 362 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 43 355 1.3E-123 T 12-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 BAMF_3686 e690929fcefb8cff06eadd41f0652e33 362 Gene3D G3DSA:3.20.10.10 170 338 2.4E-137 T 12-10-2018 BAMF_3686 e690929fcefb8cff06eadd41f0652e33 362 PIRSF PIRSF006468 1 357 9.1E-136 T 12-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 BAMF_3686 e690929fcefb8cff06eadd41f0652e33 362 SUPERFAMILY SSF56752 5 352 1.57E-115 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BAMF_2903 4953b4ac2812111e37e7bf1619765e5b 397 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 14 384 2.2E-56 T 12-10-2018 IPR024455 Phage capsid BAMF_2903 4953b4ac2812111e37e7bf1619765e5b 397 SUPERFAMILY SSF56563 130 386 8.63E-28 T 12-10-2018 BAMF_2903 4953b4ac2812111e37e7bf1619765e5b 397 Pfam PF05065 Phage capsid family 135 379 9.3E-20 T 12-10-2018 IPR024455 Phage capsid BAMF_2095 e8d9de58a529847f7843aac717df491b 85 ProDom PD062992 CYTOSOLIC YPZA BH2151 12 82 2.0E-17 T 12-10-2018 IPR020314 Uncharacterised protein family YpzA BAMF_2095 e8d9de58a529847f7843aac717df491b 85 Pfam PF10819 Protein of unknown function (DUF2564) 9 85 2.8E-26 T 12-10-2018 IPR020314 Uncharacterised protein family YpzA BAMF_1454 756112758b55f36b1db966f96a313455 243 Pfam PF04055 Radical SAM superfamily 29 143 1.6E-12 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BAMF_1454 756112758b55f36b1db966f96a313455 243 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 4 243 1.1E-117 T 12-10-2018 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BAMF_1454 756112758b55f36b1db966f96a313455 243 PIRSF PIRSF000370 3 243 8.0E-52 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BAMF_1454 756112758b55f36b1db966f96a313455 243 Gene3D G3DSA:3.20.20.70 5 193 1.6E-30 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_1454 756112758b55f36b1db966f96a313455 243 Pfam PF13394 4Fe-4S single cluster domain 27 114 1.1E-8 T 12-10-2018 BAMF_1454 756112758b55f36b1db966f96a313455 243 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 5 240 38.502 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BAMF_1454 756112758b55f36b1db966f96a313455 243 SUPERFAMILY SSF102114 27 122 1.83E-13 T 12-10-2018 BAMF_2429 9e742d900cbb9feb1c2fb2b3e2b2559d 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 156 24.273 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BAMF_2429 9e742d900cbb9feb1c2fb2b3e2b2559d 157 Gene3D G3DSA:3.40.390.30 3 157 6.9E-48 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 BAMF_2429 9e742d900cbb9feb1c2fb2b3e2b2559d 157 SUPERFAMILY SSF55486 3 156 5.86E-46 T 12-10-2018 BAMF_2429 9e742d900cbb9feb1c2fb2b3e2b2559d 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 153 7.4E-42 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BAMF_2429 9e742d900cbb9feb1c2fb2b3e2b2559d 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 122 132 - T 12-10-2018 IPR020549 Endoribonuclease YbeY, conserved site BAMF_2429 9e742d900cbb9feb1c2fb2b3e2b2559d 157 Pfam PF02130 Uncharacterized protein family UPF0054 15 152 6.1E-49 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BAMF_2035 347bfbc66f43644e9788ba28fb37cb23 222 Pfam PF08241 Methyltransferase domain 40 133 1.3E-19 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BAMF_2035 347bfbc66f43644e9788ba28fb37cb23 222 SUPERFAMILY SSF53335 16 189 1.47E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_2035 347bfbc66f43644e9788ba28fb37cb23 222 Gene3D G3DSA:3.40.50.150 22 206 3.4E-31 T 12-10-2018 BAMF_2668 a69c57211582f8e0c64199e6d05adc51 313 Pfam PF01351 Ribonuclease HII 97 301 6.8E-57 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain BAMF_2668 a69c57211582f8e0c64199e6d05adc51 313 Gene3D G3DSA:3.30.310.10 1 86 3.4E-27 T 12-10-2018 IPR012295 TBP domain superfamily BAMF_2668 a69c57211582f8e0c64199e6d05adc51 313 Pfam PF11858 Domain of unknown function (DUF3378) 3 76 1.7E-26 T 12-10-2018 IPR024568 Ribonuclease HIII, N-terminal BAMF_2668 a69c57211582f8e0c64199e6d05adc51 313 Gene3D G3DSA:3.30.420.10 94 312 4.6E-79 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BAMF_2668 a69c57211582f8e0c64199e6d05adc51 313 PIRSF PIRSF037748 1 309 4.4E-119 T 12-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 BAMF_2668 a69c57211582f8e0c64199e6d05adc51 313 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 5 300 2.3E-124 T 12-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 BAMF_2668 a69c57211582f8e0c64199e6d05adc51 313 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 308 34.747 T 12-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 BAMF_2668 a69c57211582f8e0c64199e6d05adc51 313 SUPERFAMILY SSF53098 95 307 8.19E-50 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BAMF_2313 c95c1d2cd05d71f5dea20d48cdd4d1e2 91 SUPERFAMILY SSF48179 2 89 7.06E-29 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_2313 c95c1d2cd05d71f5dea20d48cdd4d1e2 91 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 1 89 8.7E-30 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BAMF_2313 c95c1d2cd05d71f5dea20d48cdd4d1e2 91 Gene3D G3DSA:1.10.1040.10 1 85 4.1E-36 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BAMF_0648 cbc5211ade7d03feb7cc42e19852035b 146 Pfam PF01037 Lrp/AsnC ligand binding domain 75 136 2.2E-9 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BAMF_0648 cbc5211ade7d03feb7cc42e19852035b 146 SMART SM00344 7 111 1.0E-27 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BAMF_0648 cbc5211ade7d03feb7cc42e19852035b 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 2.0E-16 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BAMF_0648 cbc5211ade7d03feb7cc42e19852035b 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 2.0E-16 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BAMF_0648 cbc5211ade7d03feb7cc42e19852035b 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 2.0E-16 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BAMF_0648 cbc5211ade7d03feb7cc42e19852035b 146 SUPERFAMILY SSF46785 6 65 7.27E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0648 cbc5211ade7d03feb7cc42e19852035b 146 SUPERFAMILY SSF54909 69 138 1.31E-11 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BAMF_0648 cbc5211ade7d03feb7cc42e19852035b 146 Gene3D G3DSA:1.10.10.10 1 58 1.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0648 cbc5211ade7d03feb7cc42e19852035b 146 Gene3D G3DSA:3.30.70.920 59 142 1.5E-15 T 12-10-2018 BAMF_0648 cbc5211ade7d03feb7cc42e19852035b 146 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BAMF_0648 cbc5211ade7d03feb7cc42e19852035b 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 54 9.5E-17 T 12-10-2018 BAMF_0755 8c0bef2af7ba54793206725124cad1ad 303 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 26 108 1.9E-28 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BAMF_0755 8c0bef2af7ba54793206725124cad1ad 303 SUPERFAMILY SSF53223 17 120 2.13E-34 T 12-10-2018 BAMF_0755 8c0bef2af7ba54793206725124cad1ad 303 SUPERFAMILY SSF51735 121 301 5.91E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0755 8c0bef2af7ba54793206725124cad1ad 303 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 21 303 32.883 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BAMF_0755 8c0bef2af7ba54793206725124cad1ad 303 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 23 301 1.0E-61 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BAMF_0755 8c0bef2af7ba54793206725124cad1ad 303 Gene3D G3DSA:3.40.50.10860 25 292 1.2E-92 T 12-10-2018 BAMF_0755 8c0bef2af7ba54793206725124cad1ad 303 Gene3D G3DSA:3.40.50.720 122 275 1.2E-92 T 12-10-2018 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Pfam PF04563 RNA polymerase beta subunit 28 454 3.1E-30 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Gene3D G3DSA:2.40.270.10 981 1047 4.7E-25 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Gene3D G3DSA:3.90.1110.10 154 269 3.4E-8 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 ProSitePatterns PS01166 RNA polymerases beta chain signature. 922 934 - T 12-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Gene3D G3DSA:3.90.1100.10 389 584 6.3E-74 T 12-10-2018 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 SUPERFAMILY SSF64484 13 1157 0.0 T 12-10-2018 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Gene3D G3DSA:2.40.50.150 791 930 9.6E-61 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Pfam PF04561 RNA polymerase Rpb2, domain 2 371 410 1.4E-6 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 290 1.7E-27 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Gene3D G3DSA:2.40.50.100 672 751 3.0E-27 T 12-10-2018 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Gene3D G3DSA:3.90.1100.10 20 153 2.2E-53 T 12-10-2018 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Gene3D G3DSA:3.90.1100.10 601 671 3.5E-19 T 12-10-2018 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Pfam PF00562 RNA polymerase Rpb2, domain 6 676 1069 2.2E-164 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Pfam PF10385 RNA polymerase beta subunit external 1 domain 547 614 6.1E-25 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 204 896 0.0 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Gene3D G3DSA:2.40.270.10 752 790 4.3E-6 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Gene3D G3DSA:3.90.1800.10 1057 1110 1.1E-10 T 12-10-2018 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1147 12.587 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Pfam PF04565 RNA polymerase Rpb2, domain 3 469 537 3.5E-30 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0107 e141c9cba2deb3e45694eae473e334e1 1193 Pfam PF04560 RNA polymerase Rpb2, domain 7 1071 1145 4.1E-27 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_1196 15439b0d2570736ab964270c093a392b 352 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 346 42.762 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1196 15439b0d2570736ab964270c093a392b 352 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 342 6.1E-135 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1196 15439b0d2570736ab964270c093a392b 352 SUPERFAMILY SSF52021 1 133 3.27E-48 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1196 15439b0d2570736ab964270c093a392b 352 Pfam PF00117 Glutamine amidotransferase class-I 165 340 7.6E-47 T 12-10-2018 IPR017926 Glutamine amidotransferase BAMF_1196 15439b0d2570736ab964270c093a392b 352 SUPERFAMILY SSF52317 152 343 6.7E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_1196 15439b0d2570736ab964270c093a392b 352 PRINTS PR00097 Anthranilate synthase component II signature 317 330 2.0E-7 T 12-10-2018 BAMF_1196 15439b0d2570736ab964270c093a392b 352 PRINTS PR00097 Anthranilate synthase component II signature 204 213 2.0E-7 T 12-10-2018 BAMF_1196 15439b0d2570736ab964270c093a392b 352 PRINTS PR00097 Anthranilate synthase component II signature 231 242 2.0E-7 T 12-10-2018 BAMF_1196 15439b0d2570736ab964270c093a392b 352 Gene3D G3DSA:3.50.30.20 1 143 4.2E-51 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1196 15439b0d2570736ab964270c093a392b 352 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 128 5.0E-48 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1196 15439b0d2570736ab964270c093a392b 352 Gene3D G3DSA:3.40.50.880 162 342 9.6E-35 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_1196 15439b0d2570736ab964270c093a392b 352 PRINTS PR00096 Glutamine amidotransferase superfamily signature 231 242 8.7E-12 T 12-10-2018 BAMF_1196 15439b0d2570736ab964270c093a392b 352 PRINTS PR00096 Glutamine amidotransferase superfamily signature 204 213 8.7E-12 T 12-10-2018 BAMF_1196 15439b0d2570736ab964270c093a392b 352 PRINTS PR00096 Glutamine amidotransferase superfamily signature 317 330 8.7E-12 T 12-10-2018 BAMF_1196 15439b0d2570736ab964270c093a392b 352 SMART SM01097 1 130 3.5E-70 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1196 15439b0d2570736ab964270c093a392b 352 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 231 247 3.0E-33 T 12-10-2018 BAMF_1196 15439b0d2570736ab964270c093a392b 352 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 163 177 3.0E-33 T 12-10-2018 BAMF_1196 15439b0d2570736ab964270c093a392b 352 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 248 265 3.0E-33 T 12-10-2018 BAMF_1196 15439b0d2570736ab964270c093a392b 352 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 201 215 3.0E-33 T 12-10-2018 BAMF_1196 15439b0d2570736ab964270c093a392b 352 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 273 284 3.0E-33 T 12-10-2018 BAMF_0698 dc5871d28bf9c51f26cd4e8b2003823d 322 Gene3D G3DSA:3.40.50.720 2 182 3.7E-50 T 12-10-2018 BAMF_0698 dc5871d28bf9c51f26cd4e8b2003823d 322 Gene3D G3DSA:3.90.25.10 183 322 1.8E-39 T 12-10-2018 BAMF_0698 dc5871d28bf9c51f26cd4e8b2003823d 322 SUPERFAMILY SSF51735 3 319 4.5E-85 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0698 dc5871d28bf9c51f26cd4e8b2003823d 322 Pfam PF16363 GDP-mannose 4,6 dehydratase 10 312 1.4E-55 T 12-10-2018 IPR016040 NAD(P)-binding domain BAMF_2920 d1d5cf5f9938f39d9cf095d472d94c0a 668 Pfam PF00672 HAMP domain 303 351 7.7E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_2920 d1d5cf5f9938f39d9cf095d472d94c0a 668 Gene3D G3DSA:1.10.287.950 359 659 9.9E-70 T 12-10-2018 BAMF_2920 d1d5cf5f9938f39d9cf095d472d94c0a 668 Gene3D G3DSA:3.30.450.20 61 264 1.4E-34 T 12-10-2018 BAMF_2920 d1d5cf5f9938f39d9cf095d472d94c0a 668 SMART SM00304 303 355 3.9E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_2920 d1d5cf5f9938f39d9cf095d472d94c0a 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 612 1.4E-54 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_2920 d1d5cf5f9938f39d9cf095d472d94c0a 668 SUPERFAMILY SSF58104 323 658 3.01E-71 T 12-10-2018 BAMF_2920 d1d5cf5f9938f39d9cf095d472d94c0a 668 Pfam PF02743 Cache domain 44 265 3.9E-25 T 12-10-2018 IPR033479 Double Cache domain 1 BAMF_2920 d1d5cf5f9938f39d9cf095d472d94c0a 668 SMART SM00283 384 659 3.1E-91 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_2920 d1d5cf5f9938f39d9cf095d472d94c0a 668 SUPERFAMILY SSF103190 83 190 1.18E-10 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BAMF_2920 d1d5cf5f9938f39d9cf095d472d94c0a 668 SMART SM00319 33 151 1.9E-17 T 12-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 BAMF_2920 d1d5cf5f9938f39d9cf095d472d94c0a 668 Gene3D G3DSA:1.20.1480.50 271 358 4.7E-13 T 12-10-2018 BAMF_2920 d1d5cf5f9938f39d9cf095d472d94c0a 668 Gene3D G3DSA:3.30.450.20 72 183 1.4E-34 T 12-10-2018 BAMF_1573 3ab113f28d29d17ec6291059b79bd462 149 Gene3D G3DSA:1.20.1500.10 3 126 1.9E-30 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily BAMF_1573 3ab113f28d29d17ec6291059b79bd462 149 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 12 115 8.0E-22 T 12-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA BAMF_1573 3ab113f28d29d17ec6291059b79bd462 149 SUPERFAMILY SSF158622 5 126 1.7E-35 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily BAMF_1632 097db3831db7c61d64c1fed8e4f42a5f 257 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 214 1.6E-51 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BAMF_1632 097db3831db7c61d64c1fed8e4f42a5f 257 SUPERFAMILY SSF53790 1 246 5.63E-83 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BAMF_1632 097db3831db7c61d64c1fed8e4f42a5f 257 Gene3D G3DSA:3.40.1010.10 1 117 1.3E-46 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BAMF_1632 097db3831db7c61d64c1fed8e4f42a5f 257 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BAMF_1632 097db3831db7c61d64c1fed8e4f42a5f 257 Gene3D G3DSA:3.30.950.10 118 255 4.6E-44 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BAMF_1632 097db3831db7c61d64c1fed8e4f42a5f 257 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 82 115 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BAMF_1632 097db3831db7c61d64c1fed8e4f42a5f 257 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 2 238 2.3E-101 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BAMF_3149 fddb44f2b306d39f5b554be1451b24c7 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 4.3E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3149 fddb44f2b306d39f5b554be1451b24c7 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3149 fddb44f2b306d39f5b554be1451b24c7 210 Pfam PF00072 Response regulator receiver domain 4 116 2.7E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3149 fddb44f2b306d39f5b554be1451b24c7 210 SMART SM00448 2 115 1.6E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3149 fddb44f2b306d39f5b554be1451b24c7 210 SUPERFAMILY SSF46894 138 209 2.86E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_3149 fddb44f2b306d39f5b554be1451b24c7 210 SMART SM00421 146 203 6.2E-30 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3149 fddb44f2b306d39f5b554be1451b24c7 210 SUPERFAMILY SSF52172 2 131 2.13E-32 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_3149 fddb44f2b306d39f5b554be1451b24c7 210 Gene3D G3DSA:3.40.50.12740 2 209 2.3E-72 T 12-10-2018 BAMF_3149 fddb44f2b306d39f5b554be1451b24c7 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 9.7E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3149 fddb44f2b306d39f5b554be1451b24c7 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 9.7E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3149 fddb44f2b306d39f5b554be1451b24c7 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 9.7E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_0616 92d15a26d57a79340f3fd1204e6d99ed 165 SUPERFAMILY SSF88946 19 91 4.32E-15 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_0616 92d15a26d57a79340f3fd1204e6d99ed 165 Pfam PF04542 Sigma-70 region 2 20 80 4.1E-12 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_0616 92d15a26d57a79340f3fd1204e6d99ed 165 SUPERFAMILY SSF88659 101 159 1.76E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_0616 92d15a26d57a79340f3fd1204e6d99ed 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 158 3.5E-25 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_0616 92d15a26d57a79340f3fd1204e6d99ed 165 Gene3D G3DSA:1.10.1740.10 2 81 1.5E-16 T 12-10-2018 BAMF_0616 92d15a26d57a79340f3fd1204e6d99ed 165 Gene3D G3DSA:1.10.10.10 97 161 1.4E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0616 92d15a26d57a79340f3fd1204e6d99ed 165 Pfam PF08281 Sigma-70, region 4 104 154 5.7E-14 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_1944 29f7c27b34c25f063ee4ac9a2c65c228 181 SUPERFAMILY SSF56349 6 179 2.15E-39 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BAMF_1944 29f7c27b34c25f063ee4ac9a2c65c228 181 Pfam PF00589 Phage integrase family 13 164 3.5E-25 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BAMF_1944 29f7c27b34c25f063ee4ac9a2c65c228 181 Gene3D G3DSA:1.10.443.10 6 179 3.1E-33 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BAMF_0786 52eb0855356ef51fab95f7107ba8d28b 60 Pfam PF08141 Small acid-soluble spore protein H family 2 58 2.1E-20 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 BAMF_0786 52eb0855356ef51fab95f7107ba8d28b 60 TIGRFAM TIGR02861 SASP_H: small acid-soluble spore protein, H-type 2 58 1.4E-21 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 BAMF_0786 52eb0855356ef51fab95f7107ba8d28b 60 ProDom PD052450 H SPORE ACID-SOLUBLE SMALL SASP SPORULATION SMALL PROTEIN-RELATED SOLUBLE RBL04815 1 59 1.0E-15 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 BAMF_0786 52eb0855356ef51fab95f7107ba8d28b 60 Hamap MF_00667 Small, acid-soluble spore protein H [sspH]. 1 59 18.945 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 BAMF_2715 b174dcdfdda60d32a4235c7a2d1792ec 312 Gene3D G3DSA:3.40.50.720 1 149 1.4E-60 T 12-10-2018 BAMF_2715 b174dcdfdda60d32a4235c7a2d1792ec 312 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 5 311 3.2E-172 T 12-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 BAMF_2715 b174dcdfdda60d32a4235c7a2d1792ec 312 PIRSF PIRSF000102 2 311 5.2E-105 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BAMF_2715 b174dcdfdda60d32a4235c7a2d1792ec 312 SUPERFAMILY SSF51735 4 147 3.29E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2715 b174dcdfdda60d32a4235c7a2d1792ec 312 Gene3D G3DSA:3.90.110.10 150 310 2.8E-61 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BAMF_2715 b174dcdfdda60d32a4235c7a2d1792ec 312 SUPERFAMILY SSF56327 151 309 1.15E-53 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BAMF_2715 b174dcdfdda60d32a4235c7a2d1792ec 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 147 1.6E-41 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 BAMF_2715 b174dcdfdda60d32a4235c7a2d1792ec 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 309 4.5E-28 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 BAMF_2715 b174dcdfdda60d32a4235c7a2d1792ec 312 Hamap MF_00487 Malate dehydrogenase [mdh]. 5 312 46.799 T 12-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 BAMF_2715 b174dcdfdda60d32a4235c7a2d1792ec 312 PRINTS PR00086 L-lactate dehydrogenase signature 175 188 1.6E-31 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BAMF_2715 b174dcdfdda60d32a4235c7a2d1792ec 312 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 1.6E-31 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BAMF_2715 b174dcdfdda60d32a4235c7a2d1792ec 312 PRINTS PR00086 L-lactate dehydrogenase signature 121 141 1.6E-31 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BAMF_2715 b174dcdfdda60d32a4235c7a2d1792ec 312 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 1.6E-31 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BAMF_2715 b174dcdfdda60d32a4235c7a2d1792ec 312 PRINTS PR00086 L-lactate dehydrogenase signature 145 163 1.6E-31 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BAMF_0828 8a2a06878c2a2b8183b6e4f9e16a0e79 66 SUPERFAMILY SSF47413 2 43 3.75E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_0828 8a2a06878c2a2b8183b6e4f9e16a0e79 66 Gene3D G3DSA:1.10.260.40 1 61 2.8E-6 T 12-10-2018 BAMF_0828 8a2a06878c2a2b8183b6e4f9e16a0e79 66 Pfam PF01381 Helix-turn-helix 10 42 8.9E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_0343 85da402dadb53d7919504eec486555be 474 Gene3D G3DSA:1.10.287.130 244 315 4.4E-21 T 12-10-2018 BAMF_0343 85da402dadb53d7919504eec486555be 474 Pfam PF00672 HAMP domain 191 236 8.1E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_0343 85da402dadb53d7919504eec486555be 474 SMART SM00304 188 240 1.9E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_0343 85da402dadb53d7919504eec486555be 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 313 7.9E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_0343 85da402dadb53d7919504eec486555be 474 SUPERFAMILY SSF47384 231 315 7.06E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_0343 85da402dadb53d7919504eec486555be 474 Gene3D G3DSA:1.20.1480.50 152 243 1.3E-13 T 12-10-2018 BAMF_0343 85da402dadb53d7919504eec486555be 474 SUPERFAMILY SSF55874 305 469 3.41E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0343 85da402dadb53d7919504eec486555be 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 2.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0343 85da402dadb53d7919504eec486555be 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 2.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0343 85da402dadb53d7919504eec486555be 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 2.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0343 85da402dadb53d7919504eec486555be 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 423 2.7E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0343 85da402dadb53d7919504eec486555be 474 SMART SM00388 248 314 1.8E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_0343 85da402dadb53d7919504eec486555be 474 Gene3D G3DSA:3.30.565.10 316 474 1.6E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0343 85da402dadb53d7919504eec486555be 474 SMART SM00387 359 471 1.7E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0343 85da402dadb53d7919504eec486555be 474 SUPERFAMILY SSF158472 191 237 1.02E-9 T 12-10-2018 BAMF_0343 85da402dadb53d7919504eec486555be 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 470 9.2E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3139 5fd9145eb0ff9008069dd605f8770db6 453 Pfam PF13365 Trypsin-like peptidase domain 164 308 4.9E-31 T 12-10-2018 BAMF_3139 5fd9145eb0ff9008069dd605f8770db6 453 Gene3D G3DSA:2.40.10.10 229 345 4.3E-41 T 12-10-2018 BAMF_3139 5fd9145eb0ff9008069dd605f8770db6 453 SUPERFAMILY SSF50156 330 445 3.55E-22 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BAMF_3139 5fd9145eb0ff9008069dd605f8770db6 453 Gene3D G3DSA:2.30.42.10 346 452 8.9E-27 T 12-10-2018 BAMF_3139 5fd9145eb0ff9008069dd605f8770db6 453 PRINTS PR00834 HtrA/DegQ protease family signature 176 188 1.6E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_3139 5fd9145eb0ff9008069dd605f8770db6 453 PRINTS PR00834 HtrA/DegQ protease family signature 197 217 1.6E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_3139 5fd9145eb0ff9008069dd605f8770db6 453 PRINTS PR00834 HtrA/DegQ protease family signature 393 405 1.6E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_3139 5fd9145eb0ff9008069dd605f8770db6 453 PRINTS PR00834 HtrA/DegQ protease family signature 279 296 1.6E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_3139 5fd9145eb0ff9008069dd605f8770db6 453 PRINTS PR00834 HtrA/DegQ protease family signature 238 262 1.6E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_3139 5fd9145eb0ff9008069dd605f8770db6 453 PRINTS PR00834 HtrA/DegQ protease family signature 301 318 1.6E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_3139 5fd9145eb0ff9008069dd605f8770db6 453 SMART SM00228 346 436 7.1E-15 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_3139 5fd9145eb0ff9008069dd605f8770db6 453 SUPERFAMILY SSF50494 121 343 1.37E-57 T 12-10-2018 IPR009003 Peptidase S1, PA clan BAMF_3139 5fd9145eb0ff9008069dd605f8770db6 453 Pfam PF13180 PDZ domain 346 445 3.2E-20 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_3139 5fd9145eb0ff9008069dd605f8770db6 453 Gene3D G3DSA:2.40.10.10 111 227 4.7E-27 T 12-10-2018 BAMF_1709 0578df97853a4dc85807973a40cdeec9 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 17 38 2.6E-29 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BAMF_1709 0578df97853a4dc85807973a40cdeec9 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 178 200 2.6E-29 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BAMF_1709 0578df97853a4dc85807973a40cdeec9 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 200 219 2.6E-29 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BAMF_1709 0578df97853a4dc85807973a40cdeec9 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 75 94 2.6E-29 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BAMF_1709 0578df97853a4dc85807973a40cdeec9 259 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 10 253 7.1E-69 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 BAMF_1709 0578df97853a4dc85807973a40cdeec9 259 Pfam PF01311 Bacterial export proteins, family 1 9 243 2.2E-72 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BAMF_0214 31129e92024e8328fa9e6ef92ca1a04e 271 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 11 263 36.573 T 12-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 BAMF_0214 31129e92024e8328fa9e6ef92ca1a04e 271 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 51 262 3.1E-70 T 12-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 BAMF_0214 31129e92024e8328fa9e6ef92ca1a04e 271 Pfam PF02666 Phosphatidylserine decarboxylase 63 261 3.5E-55 T 12-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 BAMF_3909 cbe6f98b5b6d25e03709cec6f8261964 68 PIRSF PIRSF037263 1 66 7.6E-36 T 12-10-2018 IPR009296 Protein of unknown function DUF951 BAMF_3909 cbe6f98b5b6d25e03709cec6f8261964 68 Pfam PF06107 Bacterial protein of unknown function (DUF951) 7 59 2.2E-31 T 12-10-2018 IPR009296 Protein of unknown function DUF951 BAMF_1236 236a989ce0139ea717e64e5f018721b1 297 Pfam PF00849 RNA pseudouridylate synthase 90 240 4.1E-26 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_1236 236a989ce0139ea717e64e5f018721b1 297 SUPERFAMILY SSF55120 75 295 4.8E-68 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_1236 236a989ce0139ea717e64e5f018721b1 297 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 41 295 9.9E-72 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_1236 236a989ce0139ea717e64e5f018721b1 297 Gene3D G3DSA:3.30.2350.10 83 297 7.1E-67 T 12-10-2018 BAMF_1236 236a989ce0139ea717e64e5f018721b1 297 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 133 147 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_0129 74be2f7d785ba7e3f49c9ced117aa06d 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 1.3E-25 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0129 74be2f7d785ba7e3f49c9ced117aa06d 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0129 74be2f7d785ba7e3f49c9ced117aa06d 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.948 T 12-10-2018 IPR023053 Ribosomal protein S14, type Z BAMF_0129 74be2f7d785ba7e3f49c9ced117aa06d 61 Gene3D G3DSA:4.10.830.10 1 61 1.8E-30 T 12-10-2018 BAMF_0129 74be2f7d785ba7e3f49c9ced117aa06d 61 SUPERFAMILY SSF57716 3 61 6.99E-22 T 12-10-2018 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 SUPERFAMILY SSF53738 257 365 1.41E-32 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 Gene3D G3DSA:3.40.120.10 3 155 2.5E-58 T 12-10-2018 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 5.4E-43 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 Gene3D G3DSA:3.40.120.10 256 339 1.8E-72 T 12-10-2018 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 444 45.208 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 442 2.7E-187 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 Gene3D G3DSA:3.30.310.50 370 448 8.8E-30 T 12-10-2018 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 SUPERFAMILY SSF53738 157 256 1.37E-26 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 Gene3D G3DSA:3.40.120.10 174 362 1.8E-72 T 12-10-2018 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 368 3.3E-35 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 253 9.7E-16 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 SUPERFAMILY SSF55957 357 446 4.32E-27 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 5.4E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 5.4E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 5.4E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 1.4E-19 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_0180 dcb6c058e73635cad3703355f52f0186 448 SUPERFAMILY SSF53738 3 180 2.04E-46 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_3202 74a32c1bc2e4e77b5e619d426bea38a7 222 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 13 222 27.839 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 BAMF_3202 74a32c1bc2e4e77b5e619d426bea38a7 222 Pfam PF02525 Flavodoxin-like fold 14 217 1.1E-44 T 12-10-2018 IPR003680 Flavodoxin-like fold BAMF_3202 74a32c1bc2e4e77b5e619d426bea38a7 222 Gene3D G3DSA:3.40.50.360 12 222 1.4E-61 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_3202 74a32c1bc2e4e77b5e619d426bea38a7 222 SUPERFAMILY SSF52218 12 220 7.74E-52 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_2331 c7d0f7ef699e6a597f923fcb63200b0e 633 Gene3D G3DSA:3.40.50.970 313 489 2.4E-65 T 12-10-2018 BAMF_2331 c7d0f7ef699e6a597f923fcb63200b0e 633 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 4 623 0.0 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BAMF_2331 c7d0f7ef699e6a597f923fcb63200b0e 633 SUPERFAMILY SSF52922 490 621 3.8E-33 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BAMF_2331 c7d0f7ef699e6a597f923fcb63200b0e 633 SUPERFAMILY SSF52518 315 503 5.14E-54 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_2331 c7d0f7ef699e6a597f923fcb63200b0e 633 Gene3D G3DSA:3.40.50.920 493 625 1.0E-37 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BAMF_2331 c7d0f7ef699e6a597f923fcb63200b0e 633 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BAMF_2331 c7d0f7ef699e6a597f923fcb63200b0e 633 SUPERFAMILY SSF52518 6 378 6.24E-71 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_2331 c7d0f7ef699e6a597f923fcb63200b0e 633 Pfam PF02780 Transketolase, C-terminal domain 493 615 2.3E-33 T 12-10-2018 IPR033248 Transketolase, C-terminal domain BAMF_2331 c7d0f7ef699e6a597f923fcb63200b0e 633 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 624 44.806 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BAMF_2331 c7d0f7ef699e6a597f923fcb63200b0e 633 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BAMF_2331 c7d0f7ef699e6a597f923fcb63200b0e 633 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 278 4.9E-116 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BAMF_2331 c7d0f7ef699e6a597f923fcb63200b0e 633 Pfam PF02779 Transketolase, pyrimidine binding domain 316 477 6.7E-39 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BAMF_2331 c7d0f7ef699e6a597f923fcb63200b0e 633 SMART SM00861 316 481 6.2E-63 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BAMF_2594 a65db25c5568659a98131f777a59eb22 383 Pfam PF00266 Aminotransferase class-V 2 366 2.7E-78 T 12-10-2018 IPR000192 Aminotransferase class V domain BAMF_2594 a65db25c5568659a98131f777a59eb22 383 Gene3D G3DSA:1.10.260.50 13 276 4.9E-114 T 12-10-2018 BAMF_2594 a65db25c5568659a98131f777a59eb22 383 SUPERFAMILY SSF53383 1 375 3.03E-89 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_2594 a65db25c5568659a98131f777a59eb22 383 Gene3D G3DSA:3.90.1150.10 2 370 4.9E-114 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_2594 a65db25c5568659a98131f777a59eb22 383 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BAMF_2594 a65db25c5568659a98131f777a59eb22 383 PIRSF PIRSF005572 1 381 4.4E-118 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BAMF_2594 a65db25c5568659a98131f777a59eb22 383 Gene3D G3DSA:3.40.640.10 59 233 4.9E-114 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_2643 882d0e6176b23e82ae87ca63c422fd05 245 Gene3D G3DSA:3.30.230.70 1 245 2.2E-62 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BAMF_2643 882d0e6176b23e82ae87ca63c422fd05 245 Pfam PF03725 3' exoribonuclease family, domain 2 159 225 1.2E-8 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BAMF_2643 882d0e6176b23e82ae87ca63c422fd05 245 Hamap MF_00564 Ribonuclease PH [rph]. 11 238 44.072 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 BAMF_2643 882d0e6176b23e82ae87ca63c422fd05 245 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 12-10-2018 IPR018336 Ribonuclease PH, conserved site BAMF_2643 882d0e6176b23e82ae87ca63c422fd05 245 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 5.3E-23 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BAMF_2643 882d0e6176b23e82ae87ca63c422fd05 245 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 237 1.4E-115 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 BAMF_2643 882d0e6176b23e82ae87ca63c422fd05 245 SUPERFAMILY SSF54211 1 182 1.57E-44 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_2643 882d0e6176b23e82ae87ca63c422fd05 245 SUPERFAMILY SSF55666 154 237 3.01E-23 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BAMF_2509 909f940d3fbc9a770a54bb8ff0829575 166 Pfam PF05163 DinB family 1 159 1.9E-40 T 12-10-2018 IPR007837 DNA damage-inducible protein DinB BAMF_2509 909f940d3fbc9a770a54bb8ff0829575 166 Gene3D G3DSA:1.20.120.450 1 150 8.0E-43 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BAMF_2509 909f940d3fbc9a770a54bb8ff0829575 166 SUPERFAMILY SSF109854 8 152 4.43E-32 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BAMF_2082 70acee0c210521ddf2ac36a206f3f230 161 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 12-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 BAMF_2082 70acee0c210521ddf2ac36a206f3f230 161 SUPERFAMILY SSF53597 1 160 3.8E-62 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BAMF_2082 70acee0c210521ddf2ac36a206f3f230 161 Pfam PF00186 Dihydrofolate reductase 1 159 4.0E-63 T 12-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 BAMF_2082 70acee0c210521ddf2ac36a206f3f230 161 PIRSF PIRSF000194 1 161 2.0E-62 T 12-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 BAMF_2082 70acee0c210521ddf2ac36a206f3f230 161 PRINTS PR00070 Dihydrofolate reductase signature 27 35 1.6E-15 T 12-10-2018 BAMF_2082 70acee0c210521ddf2ac36a206f3f230 161 PRINTS PR00070 Dihydrofolate reductase signature 13 23 1.6E-15 T 12-10-2018 BAMF_2082 70acee0c210521ddf2ac36a206f3f230 161 PRINTS PR00070 Dihydrofolate reductase signature 40 51 1.6E-15 T 12-10-2018 BAMF_2082 70acee0c210521ddf2ac36a206f3f230 161 PRINTS PR00070 Dihydrofolate reductase signature 91 105 1.6E-15 T 12-10-2018 BAMF_2082 70acee0c210521ddf2ac36a206f3f230 161 Gene3D G3DSA:3.40.430.10 1 161 1.2E-63 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BAMF_0665 7458f0de0d9b9b95f2f8bf2f2ab71957 284 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BAMF_0665 7458f0de0d9b9b95f2f8bf2f2ab71957 284 Gene3D G3DSA:1.10.357.10 1 192 6.3E-31 T 12-10-2018 BAMF_0665 7458f0de0d9b9b95f2f8bf2f2ab71957 284 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 6.3E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_0665 7458f0de0d9b9b95f2f8bf2f2ab71957 284 SUPERFAMILY SSF46689 3 68 1.6E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_0665 7458f0de0d9b9b95f2f8bf2f2ab71957 284 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 4.1E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_0665 7458f0de0d9b9b95f2f8bf2f2ab71957 284 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 4.1E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_1052 0f72dd7ef9fb30e29dcd57f11873dd4c 462 Pfam PF03471 Transporter associated domain 358 431 5.7E-15 T 12-10-2018 IPR005170 Transporter-associated domain BAMF_1052 0f72dd7ef9fb30e29dcd57f11873dd4c 462 SUPERFAMILY SSF54631 205 344 3.05E-28 T 12-10-2018 BAMF_1052 0f72dd7ef9fb30e29dcd57f11873dd4c 462 Gene3D G3DSA:3.30.465.10 351 430 2.1E-15 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BAMF_1052 0f72dd7ef9fb30e29dcd57f11873dd4c 462 Pfam PF00571 CBS domain 292 341 9.3E-4 T 12-10-2018 IPR000644 CBS domain BAMF_1052 0f72dd7ef9fb30e29dcd57f11873dd4c 462 Pfam PF00571 CBS domain 219 272 1.2E-4 T 12-10-2018 IPR000644 CBS domain BAMF_1052 0f72dd7ef9fb30e29dcd57f11873dd4c 462 SMART SM01091 357 433 1.5E-20 T 12-10-2018 IPR005170 Transporter-associated domain BAMF_1052 0f72dd7ef9fb30e29dcd57f11873dd4c 462 Gene3D G3DSA:3.10.580.10 197 350 1.0E-46 T 12-10-2018 BAMF_1052 0f72dd7ef9fb30e29dcd57f11873dd4c 462 Pfam PF01595 Domain of unknown function DUF21 9 202 2.4E-48 T 12-10-2018 IPR002550 CNNM, transmembrane domain BAMF_1052 0f72dd7ef9fb30e29dcd57f11873dd4c 462 SUPERFAMILY SSF56176 355 430 1.15E-13 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BAMF_3640 e6f301f5ff483b021cf537e8fd8d5f86 803 Pfam PF13860 FlgD Ig-like domain 714 788 2.7E-7 T 12-10-2018 IPR025965 FlgD Ig-like domain BAMF_3640 e6f301f5ff483b021cf537e8fd8d5f86 803 SUPERFAMILY SSF52025 375 468 3.4E-19 T 12-10-2018 BAMF_3640 e6f301f5ff483b021cf537e8fd8d5f86 803 Gene3D G3DSA:3.50.30.30 356 476 5.7E-29 T 12-10-2018 BAMF_3640 e6f301f5ff483b021cf537e8fd8d5f86 803 Pfam PF05922 Peptidase inhibitor I9 54 139 5.6E-10 T 12-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BAMF_3640 e6f301f5ff483b021cf537e8fd8d5f86 803 Pfam PF00082 Subtilase family 177 583 2.5E-81 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BAMF_3640 e6f301f5ff483b021cf537e8fd8d5f86 803 SUPERFAMILY SSF52743 158 593 7.86E-85 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BAMF_3640 e6f301f5ff483b021cf537e8fd8d5f86 803 Pfam PF02225 PA domain 382 458 1.1E-14 T 12-10-2018 IPR003137 PA domain BAMF_3640 e6f301f5ff483b021cf537e8fd8d5f86 803 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 529 539 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BAMF_3640 e6f301f5ff483b021cf537e8fd8d5f86 803 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 230 240 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BAMF_3640 e6f301f5ff483b021cf537e8fd8d5f86 803 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 182 193 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BAMF_3640 e6f301f5ff483b021cf537e8fd8d5f86 803 Gene3D G3DSA:2.60.40.4070 712 796 2.9E-7 T 12-10-2018 BAMF_3640 e6f301f5ff483b021cf537e8fd8d5f86 803 Gene3D G3DSA:3.30.70.80 48 139 7.9E-7 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BAMF_3640 e6f301f5ff483b021cf537e8fd8d5f86 803 PRINTS PR00723 Subtilisin serine protease family (S8) signature 528 544 1.0E-20 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_3640 e6f301f5ff483b021cf537e8fd8d5f86 803 PRINTS PR00723 Subtilisin serine protease family (S8) signature 226 239 1.0E-20 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_3640 e6f301f5ff483b021cf537e8fd8d5f86 803 PRINTS PR00723 Subtilisin serine protease family (S8) signature 177 196 1.0E-20 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_2200 336746d0a5cfbbf09dbb6aed3fa1f628 152 Pfam PF10864 Protein of unknown function (DUF2663) 19 150 2.4E-48 T 12-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane BAMF_2200 336746d0a5cfbbf09dbb6aed3fa1f628 152 ProDom PD089241 YPBF MEMBRANE BH1610 TRANSMEMBRANE 17 150 2.0E-51 T 12-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane BAMF_3545 4e88df62c43ceb1ea55d8e240742588f 428 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 158 362 1.6E-19 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_3545 4e88df62c43ceb1ea55d8e240742588f 428 TIGRFAM TIGR00767 rho: transcription termination factor Rho 5 414 1.4E-206 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BAMF_3545 4e88df62c43ceb1ea55d8e240742588f 428 SUPERFAMILY SSF68912 5 49 2.59E-10 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily BAMF_3545 4e88df62c43ceb1ea55d8e240742588f 428 SMART SM00382 169 354 4.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3545 4e88df62c43ceb1ea55d8e240742588f 428 Gene3D G3DSA:2.40.50.140 50 125 9.2E-29 T 12-10-2018 BAMF_3545 4e88df62c43ceb1ea55d8e240742588f 428 Pfam PF07497 Rho termination factor, RNA-binding domain 54 127 3.3E-31 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 BAMF_3545 4e88df62c43ceb1ea55d8e240742588f 428 SMART SM00357 55 120 7.8E-20 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 BAMF_3545 4e88df62c43ceb1ea55d8e240742588f 428 Gene3D G3DSA:3.40.50.300 132 414 3.7E-122 T 12-10-2018 BAMF_3545 4e88df62c43ceb1ea55d8e240742588f 428 Pfam PF07498 Rho termination factor, N-terminal domain 9 49 8.4E-15 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 BAMF_3545 4e88df62c43ceb1ea55d8e240742588f 428 SMART SM00959 8 50 2.7E-14 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 BAMF_3545 4e88df62c43ceb1ea55d8e240742588f 428 SUPERFAMILY SSF50249 52 127 4.57E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_3545 4e88df62c43ceb1ea55d8e240742588f 428 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 416 221.833 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BAMF_3545 4e88df62c43ceb1ea55d8e240742588f 428 Gene3D G3DSA:1.10.720.10 1 48 8.2E-22 T 12-10-2018 BAMF_3545 4e88df62c43ceb1ea55d8e240742588f 428 SUPERFAMILY SSF52540 92 370 1.33E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3914 43ee0f3b1c2a9353f55b408fc4d9d281 259 PRINTS PR00091 Nitrogenase component II signature 15 28 9.0E-5 T 12-10-2018 BAMF_3914 43ee0f3b1c2a9353f55b408fc4d9d281 259 PRINTS PR00091 Nitrogenase component II signature 37 52 9.0E-5 T 12-10-2018 BAMF_3914 43ee0f3b1c2a9353f55b408fc4d9d281 259 SUPERFAMILY SSF52540 8 257 4.06E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3914 43ee0f3b1c2a9353f55b408fc4d9d281 259 Pfam PF13614 AAA domain 8 184 2.7E-73 T 12-10-2018 IPR025669 AAA domain BAMF_3914 43ee0f3b1c2a9353f55b408fc4d9d281 259 Gene3D G3DSA:3.40.50.300 6 258 6.4E-85 T 12-10-2018 BAMF_2174 daa4e6a380bf513ca1aea65fd1c159d0 148 Pfam PF00334 Nucleoside diphosphate kinase 2 135 5.7E-59 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BAMF_2174 daa4e6a380bf513ca1aea65fd1c159d0 148 Gene3D G3DSA:3.30.70.141 1 148 1.6E-64 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BAMF_2174 daa4e6a380bf513ca1aea65fd1c159d0 148 SMART SM00562 1 138 5.9E-91 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BAMF_2174 daa4e6a380bf513ca1aea65fd1c159d0 148 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 12-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_2174 daa4e6a380bf513ca1aea65fd1c159d0 148 SUPERFAMILY SSF54919 1 148 5.5E-62 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BAMF_2174 daa4e6a380bf513ca1aea65fd1c159d0 148 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 37.311 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BAMF_2174 daa4e6a380bf513ca1aea65fd1c159d0 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 2.5E-52 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BAMF_2174 daa4e6a380bf513ca1aea65fd1c159d0 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 2.5E-52 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BAMF_2174 daa4e6a380bf513ca1aea65fd1c159d0 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 2.5E-52 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BAMF_2174 daa4e6a380bf513ca1aea65fd1c159d0 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 2.5E-52 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BAMF_2174 daa4e6a380bf513ca1aea65fd1c159d0 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 2.5E-52 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 Gene3D G3DSA:1.10.150.20 176 249 7.0E-99 T 12-10-2018 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 SMART SM00475 5 264 2.6E-150 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 SMART SM00474 298 469 1.5E-24 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 Gene3D G3DSA:3.40.50.1010 7 280 7.0E-99 T 12-10-2018 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 Gene3D G3DSA:3.30.70.370 614 875 9.9E-110 T 12-10-2018 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 Gene3D G3DSA:1.20.1060.10 494 608 7.7E-45 T 12-10-2018 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 172 1.4E-52 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 SMART SM00482 636 843 2.6E-124 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 TIGRFAM TIGR00593 pola: DNA polymerase I 7 879 0.0 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 Pfam PF00476 DNA polymerase family A 501 877 4.9E-162 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 SUPERFAMILY SSF88723 4 172 3.14E-54 T 12-10-2018 IPR029060 PIN-like domain superfamily BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 ProSitePatterns PS00447 DNA polymerase family A signature. 705 724 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 Gene3D G3DSA:1.10.150.20 660 803 9.9E-110 T 12-10-2018 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 SUPERFAMILY SSF53098 303 471 1.02E-43 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 SUPERFAMILY SSF56672 472 879 3.34E-160 T 12-10-2018 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 174 268 4.6E-35 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 SMART SM00279 175 210 6.3E-17 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 694 7.2E-83 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 764 775 7.2E-83 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 628 643 7.2E-83 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 605 627 7.2E-83 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 705 730 7.2E-83 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 742 753 7.2E-83 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 651 674 7.2E-83 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 796 812 7.2E-83 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 826 839 7.2E-83 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 SUPERFAMILY SSF47807 173 287 7.78E-34 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BAMF_2712 94fb8c80daecf0a7d00274afcf650f64 879 Gene3D G3DSA:3.30.420.10 300 492 5.2E-63 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 SUPERFAMILY SSF54211 223 393 1.61E-51 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 Pfam PF01751 Toprim domain 424 525 4.2E-17 T 12-10-2018 IPR006171 TOPRIM domain BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 8 643 0.0 T 12-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 ProSitePatterns PS00177 DNA topoisomerase II signature. 427 435 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 SUPERFAMILY SSF56719 399 634 9.42E-87 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 155 3.2E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 Gene3D G3DSA:3.30.230.10 222 403 2.4E-69 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 Pfam PF00204 DNA gyrase B 223 393 5.8E-57 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 7 639 48.322 T 12-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 569 630 2.2E-30 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 Gene3D G3DSA:3.30.565.10 6 221 4.9E-88 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR01159 DNA gyrase subunit B signature 363 377 2.0E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR01159 DNA gyrase subunit B signature 377 397 2.0E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR01159 DNA gyrase subunit B signature 610 626 2.0E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR01159 DNA gyrase subunit B signature 198 211 2.0E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR01159 DNA gyrase subunit B signature 222 244 2.0E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR01159 DNA gyrase subunit B signature 475 484 2.0E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR01159 DNA gyrase subunit B signature 313 329 2.0E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR01159 DNA gyrase subunit B signature 183 198 2.0E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR01159 DNA gyrase subunit B signature 9 19 2.0E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR01159 DNA gyrase subunit B signature 594 606 2.0E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR00418 DNA topoisomerase II family signature 73 86 4.9E-70 T 12-10-2018 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR00418 DNA topoisomerase II family signature 509 526 4.9E-70 T 12-10-2018 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR00418 DNA topoisomerase II family signature 573 589 4.9E-70 T 12-10-2018 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR00418 DNA topoisomerase II family signature 38 53 4.9E-70 T 12-10-2018 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR00418 DNA topoisomerase II family signature 529 541 4.9E-70 T 12-10-2018 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR00418 DNA topoisomerase II family signature 269 282 4.9E-70 T 12-10-2018 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR00418 DNA topoisomerase II family signature 115 129 4.9E-70 T 12-10-2018 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR00418 DNA topoisomerase II family signature 425 439 4.9E-70 T 12-10-2018 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 PRINTS PR00418 DNA topoisomerase II family signature 491 507 4.9E-70 T 12-10-2018 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 Gene3D G3DSA:3.40.50.670 411 643 2.4E-102 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 SMART SM00433 38 634 0.0 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 SMART SM00387 34 178 1.3E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1896 9cd0c3d4ec21487567c11ddf5f161d26 655 SUPERFAMILY SSF55874 9 220 7.2E-69 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3181 49bbde78e94a6f3704b0d1e275f4cc1d 227 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 19 223 1.7E-69 T 12-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 BAMF_3181 49bbde78e94a6f3704b0d1e275f4cc1d 227 SUPERFAMILY SSF161098 9 223 2.35E-49 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3181 49bbde78e94a6f3704b0d1e275f4cc1d 227 Gene3D G3DSA:1.10.3720.10 2 225 9.4E-53 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3181 49bbde78e94a6f3704b0d1e275f4cc1d 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 222 2.1E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_0299 cb8fef5605ff5d93ece9661837716140 106 Gene3D G3DSA:2.102.10.10 4 106 4.5E-28 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BAMF_0299 cb8fef5605ff5d93ece9661837716140 106 Pfam PF13806 Rieske-like [2Fe-2S] domain 10 103 1.8E-15 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 BAMF_0299 cb8fef5605ff5d93ece9661837716140 106 SUPERFAMILY SSF50022 6 105 1.3E-31 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BAMF_0299 cb8fef5605ff5d93ece9661837716140 106 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 7 105 7.9E-32 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 320 2.4E-69 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 SUPERFAMILY SSF51905 4 365 8.91E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 3.8E-36 T 12-10-2018 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 3.8E-36 T 12-10-2018 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 273 3.8E-36 T 12-10-2018 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 3.8E-36 T 12-10-2018 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 3.8E-36 T 12-10-2018 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 Gene3D G3DSA:3.50.50.60 3 325 3.5E-114 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 SUPERFAMILY SSF55424 335 457 2.06E-33 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 Gene3D G3DSA:3.30.390.30 338 458 5.3E-37 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 457 3.8E-160 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 447 2.2E-31 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 400 415 2.5E-61 T 12-10-2018 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 2.5E-61 T 12-10-2018 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 34 49 2.5E-61 T 12-10-2018 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 2.5E-61 T 12-10-2018 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 2.5E-61 T 12-10-2018 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 2.5E-61 T 12-10-2018 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 2.5E-61 T 12-10-2018 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 422 442 2.5E-61 T 12-10-2018 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 258 272 2.5E-61 T 12-10-2018 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 35 45 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 Gene3D G3DSA:3.50.50.60 148 267 3.5E-114 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0784 dbb993e0f1be1ed7caf257632fe25f27 459 PIRSF PIRSF000350 1 452 1.5E-86 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BAMF_3213 7b656e9cdde6ca1e1625fa52038407fd 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.4E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3213 7b656e9cdde6ca1e1625fa52038407fd 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.4E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3213 7b656e9cdde6ca1e1625fa52038407fd 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.4E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3213 7b656e9cdde6ca1e1625fa52038407fd 265 SUPERFAMILY SSF51735 7 260 5.56E-65 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3213 7b656e9cdde6ca1e1625fa52038407fd 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 6.1E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3213 7b656e9cdde6ca1e1625fa52038407fd 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.1E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3213 7b656e9cdde6ca1e1625fa52038407fd 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 6.1E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3213 7b656e9cdde6ca1e1625fa52038407fd 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.1E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3213 7b656e9cdde6ca1e1625fa52038407fd 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.1E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3213 7b656e9cdde6ca1e1625fa52038407fd 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.1E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3213 7b656e9cdde6ca1e1625fa52038407fd 265 Gene3D G3DSA:3.40.50.720 2 265 6.0E-77 T 12-10-2018 BAMF_3213 7b656e9cdde6ca1e1625fa52038407fd 265 Pfam PF00106 short chain dehydrogenase 9 195 1.2E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2881 6262c5565ec66d88ac4ad51ffa1965eb 376 SMART SM00028 138 171 30.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2881 6262c5565ec66d88ac4ad51ffa1965eb 376 SMART SM00028 179 212 230.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2881 6262c5565ec66d88ac4ad51ffa1965eb 376 SMART SM00028 220 253 0.0087 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2881 6262c5565ec66d88ac4ad51ffa1965eb 376 SMART SM00028 98 131 40.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2881 6262c5565ec66d88ac4ad51ffa1965eb 376 SUPERFAMILY SSF48452 80 287 2.97E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_2881 6262c5565ec66d88ac4ad51ffa1965eb 376 Pfam PF13424 Tetratricopeptide repeat 193 252 4.7E-10 T 12-10-2018 BAMF_2881 6262c5565ec66d88ac4ad51ffa1965eb 376 Gene3D G3DSA:1.25.40.10 1 376 1.2E-121 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_0956 5e3a5a4ab485c0217812bfac4496995d 854 Pfam PF12708 Pectate lyase superfamily protein 121 350 7.9E-15 T 12-10-2018 IPR024535 Pectate lyase superfamily protein BAMF_0956 5e3a5a4ab485c0217812bfac4496995d 854 Gene3D G3DSA:4.10.80.40 740 778 1.0E-60 T 12-10-2018 BAMF_0956 5e3a5a4ab485c0217812bfac4496995d 854 SMART SM00710 333 354 300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0956 5e3a5a4ab485c0217812bfac4496995d 854 SMART SM00710 276 298 670.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0956 5e3a5a4ab485c0217812bfac4496995d 854 SMART SM00710 299 331 130.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0956 5e3a5a4ab485c0217812bfac4496995d 854 SMART SM00710 487 509 41.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0956 5e3a5a4ab485c0217812bfac4496995d 854 SMART SM00710 458 480 1400.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0956 5e3a5a4ab485c0217812bfac4496995d 854 SUPERFAMILY SSF51126 117 407 1.57E-33 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BAMF_0956 5e3a5a4ab485c0217812bfac4496995d 854 Gene3D G3DSA:2.160.20.10 112 566 1.7E-113 T 12-10-2018 IPR012334 Pectin lyase fold BAMF_0956 5e3a5a4ab485c0217812bfac4496995d 854 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 632 850 7.4E-72 T 12-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain BAMF_0956 5e3a5a4ab485c0217812bfac4496995d 854 Gene3D G3DSA:2.40.300.10 687 848 1.0E-60 T 12-10-2018 BAMF_2983 1686a8fac03a29e44b9b9ddd9ec685fe 1040 TIGRFAM TIGR03929 T7_esaA_Nterm: type VII secretion protein EsaA 11 206 1.6E-74 T 12-10-2018 IPR023838 Type VII secretion system EsaA GO:0016021 BAMF_2983 1686a8fac03a29e44b9b9ddd9ec685fe 1040 SUPERFAMILY SSF57997 513 589 7.85E-5 T 12-10-2018 BAMF_2983 1686a8fac03a29e44b9b9ddd9ec685fe 1040 Gene3D G3DSA:3.90.20.10 508 620 3.1E-5 T 12-10-2018 BAMF_2983 1686a8fac03a29e44b9b9ddd9ec685fe 1040 Pfam PF12698 ABC-2 family transporter protein 8 185 5.7E-8 T 12-10-2018 BAMF_1175 0583f302089ff3de1d9df68697b50935 613 Gene3D G3DSA:3.20.20.220 311 598 4.6E-48 T 12-10-2018 BAMF_1175 0583f302089ff3de1d9df68697b50935 613 Gene3D G3DSA:3.20.20.330 2 293 1.8E-86 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BAMF_1175 0583f302089ff3de1d9df68697b50935 613 Pfam PF02219 Methylenetetrahydrofolate reductase 314 573 1.1E-25 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BAMF_1175 0583f302089ff3de1d9df68697b50935 613 SUPERFAMILY SSF82282 2 360 8.89E-98 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BAMF_1175 0583f302089ff3de1d9df68697b50935 613 SUPERFAMILY SSF51730 314 601 1.0E-63 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like BAMF_1175 0583f302089ff3de1d9df68697b50935 613 Pfam PF02574 Homocysteine S-methyltransferase 12 280 2.5E-58 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.4E-8 T 12-10-2018 BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 378 5.4E-8 T 12-10-2018 BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 39 48 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 SUPERFAMILY SSF56425 231 353 3.74E-31 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 6 579 5.0E-283 T 12-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 Gene3D G3DSA:1.20.58.100 423 539 3.1E-34 T 12-10-2018 BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 PIRSF PIRSF000171 343 574 2.7E-16 T 12-10-2018 BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 PIRSF PIRSF000171 1 240 1.6E-20 T 12-10-2018 BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 2.0E-6 T 12-10-2018 BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.0E-6 T 12-10-2018 BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 Gene3D G3DSA:3.90.700.10 258 367 6.6E-124 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 SUPERFAMILY SSF51905 6 425 1.11E-62 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 Pfam PF02910 Fumarate reductase flavoprotein C-term 452 579 2.4E-40 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 Gene3D G3DSA:3.50.50.60 6 403 6.6E-124 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 SUPERFAMILY SSF46977 443 579 2.62E-44 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_2650 a377b7a26b6af19b18ab30f4649d37c5 586 Pfam PF00890 FAD binding domain 6 392 1.3E-86 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_1406 d7ee4e3f7dda72a998c4650176e56fb1 223 SUPERFAMILY SSF46785 150 218 3.63E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1406 d7ee4e3f7dda72a998c4650176e56fb1 223 Gene3D G3DSA:2.60.120.1460 25 219 5.4E-23 T 12-10-2018 BAMF_1406 d7ee4e3f7dda72a998c4650176e56fb1 223 Pfam PF00027 Cyclic nucleotide-binding domain 33 114 1.3E-14 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain BAMF_1406 d7ee4e3f7dda72a998c4650176e56fb1 223 SUPERFAMILY SSF51206 27 140 6.42E-24 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like BAMF_1406 d7ee4e3f7dda72a998c4650176e56fb1 223 SMART SM00100 14 132 2.3E-10 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain BAMF_0646 f2715a1419c122959cb37737fd9465c6 512 Gene3D G3DSA:3.40.140.20 204 361 1.1E-58 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BAMF_0646 f2715a1419c122959cb37737fd9465c6 512 SUPERFAMILY SSF53927 208 512 4.41E-126 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BAMF_0646 f2715a1419c122959cb37737fd9465c6 512 Gene3D G3DSA:3.40.140.20 386 512 2.1E-57 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BAMF_0646 f2715a1419c122959cb37737fd9465c6 512 SMART SM00851 15 130 1.3E-54 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain BAMF_0646 f2715a1419c122959cb37737fd9465c6 512 SMART SM00798 135 447 1.0E-200 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BAMF_0646 f2715a1419c122959cb37737fd9465c6 512 Gene3D G3DSA:3.40.50.1380 1 198 1.1E-88 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BAMF_0646 f2715a1419c122959cb37737fd9465c6 512 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 446 3.7E-120 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BAMF_0646 f2715a1419c122959cb37737fd9465c6 512 SUPERFAMILY SSF52335 3 194 1.31E-71 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BAMF_0646 f2715a1419c122959cb37737fd9465c6 512 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 512 45.045 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BAMF_0646 f2715a1419c122959cb37737fd9465c6 512 Pfam PF02142 MGS-like domain 16 129 2.3E-28 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain BAMF_0646 f2715a1419c122959cb37737fd9465c6 512 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4 512 3.0E-253 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BAMF_0646 f2715a1419c122959cb37737fd9465c6 512 PIRSF PIRSF000414 1 512 3.8E-214 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BAMF_3345 6a5ad5d466e4ee02b2921148112419fb 396 Gene3D G3DSA:3.20.20.140 58 358 9.8E-147 T 12-10-2018 BAMF_3345 6a5ad5d466e4ee02b2921148112419fb 396 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 2 385 4.0E-136 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BAMF_3345 6a5ad5d466e4ee02b2921148112419fb 396 SUPERFAMILY SSF51556 58 358 9.83E-97 T 12-10-2018 IPR032466 Metal-dependent hydrolase BAMF_3345 6a5ad5d466e4ee02b2921148112419fb 396 PIRSF PIRSF038994 3 391 6.3E-134 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BAMF_3345 6a5ad5d466e4ee02b2921148112419fb 396 Pfam PF01979 Amidohydrolase family 55 376 1.0E-31 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BAMF_3345 6a5ad5d466e4ee02b2921148112419fb 396 Gene3D G3DSA:2.30.40.10 12 385 9.8E-147 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_3345 6a5ad5d466e4ee02b2921148112419fb 396 SUPERFAMILY SSF51338 4 391 7.72E-15 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_0507 15062fbe13937562c53f7722dae2d700 302 Pfam PF00561 alpha/beta hydrolase fold 35 287 5.4E-22 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_0507 15062fbe13937562c53f7722dae2d700 302 Gene3D G3DSA:3.40.50.1820 12 298 1.0E-85 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_0507 15062fbe13937562c53f7722dae2d700 302 SUPERFAMILY SSF53474 6 297 4.02E-76 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_0507 15062fbe13937562c53f7722dae2d700 302 PRINTS PR00412 Epoxide hydrolase signature 106 119 3.4E-12 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BAMF_0507 15062fbe13937562c53f7722dae2d700 302 PRINTS PR00412 Epoxide hydrolase signature 275 297 3.4E-12 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BAMF_0507 15062fbe13937562c53f7722dae2d700 302 PRINTS PR00412 Epoxide hydrolase signature 41 59 3.4E-12 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BAMF_2974 6e37a663feeec61cc2b0e38ae3f8494f 487 SUPERFAMILY SSF51690 141 479 1.1E-130 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BAMF_2974 6e37a663feeec61cc2b0e38ae3f8494f 487 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 159 348 4.4E-13 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 BAMF_2974 6e37a663feeec61cc2b0e38ae3f8494f 487 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 11 466 3.4E-181 T 12-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 BAMF_2974 6e37a663feeec61cc2b0e38ae3f8494f 487 SUPERFAMILY SSF54675 8 140 2.21E-50 T 12-10-2018 BAMF_2974 6e37a663feeec61cc2b0e38ae3f8494f 487 Gene3D G3DSA:3.20.20.70 153 320 2.8E-206 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_2974 6e37a663feeec61cc2b0e38ae3f8494f 487 Gene3D G3DSA:3.20.140.10 12 471 2.8E-206 T 12-10-2018 BAMF_2974 6e37a663feeec61cc2b0e38ae3f8494f 487 PIRSF PIRSF000484 5 481 6.2E-155 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 BAMF_0159 e5a2d67b5027324bb42306a0cc525058 422 Pfam PF00202 Aminotransferase class-III 19 417 1.1E-97 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_0159 e5a2d67b5027324bb42306a0cc525058 422 Gene3D G3DSA:3.40.640.10 53 316 2.4E-126 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_0159 e5a2d67b5027324bb42306a0cc525058 422 Gene3D G3DSA:3.90.1150.10 24 409 2.4E-126 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_0159 e5a2d67b5027324bb42306a0cc525058 422 SUPERFAMILY SSF53383 13 421 1.17E-111 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_0159 e5a2d67b5027324bb42306a0cc525058 422 PIRSF PIRSF000521 4 145 3.0E-8 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_0159 e5a2d67b5027324bb42306a0cc525058 422 PIRSF PIRSF000521 153 421 1.7E-36 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_0737 02ff2feac6298c8ea8a9ce7020d13068 249 Pfam PF00557 Metallopeptidase family M24 11 240 3.3E-40 T 12-10-2018 IPR000994 Peptidase M24 BAMF_0737 02ff2feac6298c8ea8a9ce7020d13068 249 SUPERFAMILY SSF55920 2 248 1.44E-65 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like BAMF_0737 02ff2feac6298c8ea8a9ce7020d13068 249 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 1 248 2.8E-99 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_0737 02ff2feac6298c8ea8a9ce7020d13068 249 Gene3D G3DSA:3.90.230.10 1 249 5.3E-82 T 12-10-2018 BAMF_0737 02ff2feac6298c8ea8a9ce7020d13068 249 Hamap MF_01974 Methionine aminopeptidase [map]. 1 249 34.827 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_0737 02ff2feac6298c8ea8a9ce7020d13068 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 1.4E-17 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_0737 02ff2feac6298c8ea8a9ce7020d13068 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 1.4E-17 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_0737 02ff2feac6298c8ea8a9ce7020d13068 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 1.4E-17 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_0737 02ff2feac6298c8ea8a9ce7020d13068 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 1.4E-17 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_1318 c286357b84a741ca182c0a3324c73867 392 Gene3D G3DSA:3.50.50.100 1 391 1.1E-115 T 12-10-2018 BAMF_1318 c286357b84a741ca182c0a3324c73867 392 SUPERFAMILY SSF51905 1 330 1.74E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1318 c286357b84a741ca182c0a3324c73867 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.4E-6 T 12-10-2018 BAMF_1318 c286357b84a741ca182c0a3324c73867 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 290 297 1.4E-6 T 12-10-2018 BAMF_1318 c286357b84a741ca182c0a3324c73867 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 181 1.4E-6 T 12-10-2018 BAMF_1318 c286357b84a741ca182c0a3324c73867 392 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 318 2.9E-42 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BAMF_1318 c286357b84a741ca182c0a3324c73867 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.2E-10 T 12-10-2018 BAMF_1318 c286357b84a741ca182c0a3324c73867 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 1.2E-10 T 12-10-2018 BAMF_1318 c286357b84a741ca182c0a3324c73867 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.2E-10 T 12-10-2018 BAMF_1318 c286357b84a741ca182c0a3324c73867 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.2E-10 T 12-10-2018 BAMF_1967 624d56e8d3cc2252d8765d0af2c060cb 191 Pfam PF00239 Resolvase, N terminal domain 4 139 1.9E-37 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BAMF_1967 624d56e8d3cc2252d8765d0af2c060cb 191 Gene3D G3DSA:3.40.50.1390 2 128 1.9E-34 T 12-10-2018 BAMF_1967 624d56e8d3cc2252d8765d0af2c060cb 191 Pfam PF02796 Helix-turn-helix domain of resolvase 142 188 7.1E-17 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 BAMF_1967 624d56e8d3cc2252d8765d0af2c060cb 191 SUPERFAMILY SSF53041 3 139 6.8E-37 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BAMF_1967 624d56e8d3cc2252d8765d0af2c060cb 191 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 BAMF_1967 624d56e8d3cc2252d8765d0af2c060cb 191 SMART SM00857 3 140 1.8E-42 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BAMF_3813 624d56e8d3cc2252d8765d0af2c060cb 191 Pfam PF00239 Resolvase, N terminal domain 4 139 1.9E-37 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BAMF_3813 624d56e8d3cc2252d8765d0af2c060cb 191 Gene3D G3DSA:3.40.50.1390 2 128 1.9E-34 T 12-10-2018 BAMF_3813 624d56e8d3cc2252d8765d0af2c060cb 191 Pfam PF02796 Helix-turn-helix domain of resolvase 142 188 7.1E-17 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 BAMF_3813 624d56e8d3cc2252d8765d0af2c060cb 191 SUPERFAMILY SSF53041 3 139 6.8E-37 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BAMF_3813 624d56e8d3cc2252d8765d0af2c060cb 191 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 BAMF_3813 624d56e8d3cc2252d8765d0af2c060cb 191 SMART SM00857 3 140 1.8E-42 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BAMF_1836 624d56e8d3cc2252d8765d0af2c060cb 191 Pfam PF00239 Resolvase, N terminal domain 4 139 1.9E-37 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BAMF_1836 624d56e8d3cc2252d8765d0af2c060cb 191 Gene3D G3DSA:3.40.50.1390 2 128 1.9E-34 T 12-10-2018 BAMF_1836 624d56e8d3cc2252d8765d0af2c060cb 191 Pfam PF02796 Helix-turn-helix domain of resolvase 142 188 7.1E-17 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 BAMF_1836 624d56e8d3cc2252d8765d0af2c060cb 191 SUPERFAMILY SSF53041 3 139 6.8E-37 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BAMF_1836 624d56e8d3cc2252d8765d0af2c060cb 191 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 BAMF_1836 624d56e8d3cc2252d8765d0af2c060cb 191 SMART SM00857 3 140 1.8E-42 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BAMF_0770 b71d0ea0c72e7ee71e403e9b19d41c50 65 SUPERFAMILY SSF48179 1 64 2.04E-13 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_0770 b71d0ea0c72e7ee71e403e9b19d41c50 65 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 4 63 4.8E-9 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 BAMF_0770 b71d0ea0c72e7ee71e403e9b19d41c50 65 Gene3D G3DSA:1.10.1040.10 1 65 7.1E-17 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BAMF_2927 cb1690949b8b07e4b7640a5e2cbcd1ea 552 Gene3D G3DSA:3.20.20.80 1 109 1.4E-44 T 12-10-2018 BAMF_2927 cb1690949b8b07e4b7640a5e2cbcd1ea 552 Pfam PF00128 Alpha amylase, catalytic domain 28 372 3.5E-112 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BAMF_2927 cb1690949b8b07e4b7640a5e2cbcd1ea 552 Pfam PF16657 Maltogenic Amylase, C-terminal domain 475 548 5.3E-8 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal BAMF_2927 cb1690949b8b07e4b7640a5e2cbcd1ea 552 SUPERFAMILY SSF51445 3 472 3.36E-151 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_2927 cb1690949b8b07e4b7640a5e2cbcd1ea 552 SUPERFAMILY SSF51011 475 551 2.7E-15 T 12-10-2018 BAMF_2927 cb1690949b8b07e4b7640a5e2cbcd1ea 552 Gene3D G3DSA:2.60.40.1180 476 552 2.3E-18 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta BAMF_2927 cb1690949b8b07e4b7640a5e2cbcd1ea 552 Gene3D G3DSA:3.20.20.80 170 475 1.1E-118 T 12-10-2018 BAMF_2927 cb1690949b8b07e4b7640a5e2cbcd1ea 552 Gene3D G3DSA:3.90.400.10 110 169 9.3E-34 T 12-10-2018 BAMF_2927 cb1690949b8b07e4b7640a5e2cbcd1ea 552 PRINTS PR00110 Alpha-amylase signature 92 103 1.4E-5 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BAMF_2927 cb1690949b8b07e4b7640a5e2cbcd1ea 552 PRINTS PR00110 Alpha-amylase signature 316 328 1.4E-5 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BAMF_2927 cb1690949b8b07e4b7640a5e2cbcd1ea 552 PRINTS PR00110 Alpha-amylase signature 193 204 1.4E-5 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 BAMF_2927 cb1690949b8b07e4b7640a5e2cbcd1ea 552 SMART SM00642 13 414 5.2E-157 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BAMF_0103 1e6fc392671053985d5aaea806c6b593 232 SUPERFAMILY SSF56808 6 226 2.35E-85 T 12-10-2018 IPR023674 Ribosomal protein L1-like BAMF_0103 1e6fc392671053985d5aaea806c6b593 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 44.808 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BAMF_0103 1e6fc392671053985d5aaea806c6b593 232 Gene3D G3DSA:3.40.50.790 68 159 2.9E-85 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich BAMF_0103 1e6fc392671053985d5aaea806c6b593 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0103 1e6fc392671053985d5aaea806c6b593 232 PIRSF PIRSF002155 1 227 1.1E-81 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0103 1e6fc392671053985d5aaea806c6b593 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.7E-108 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BAMF_0103 1e6fc392671053985d5aaea806c6b593 232 Gene3D G3DSA:3.30.190.20 21 225 2.9E-85 T 12-10-2018 BAMF_0103 1e6fc392671053985d5aaea806c6b593 232 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 5.2E-56 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein BAMF_1920 46b7960146da04d6b614151769c914f8 339 SUPERFAMILY SSF102114 16 320 8.24E-71 T 12-10-2018 BAMF_1920 46b7960146da04d6b614151769c914f8 339 Gene3D G3DSA:3.20.20.70 15 324 2.1E-106 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_1920 46b7960146da04d6b614151769c914f8 339 TIGRFAM TIGR00433 bioB: biotin synthase 27 320 7.7E-119 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BAMF_1920 46b7960146da04d6b614151769c914f8 339 Hamap MF_01694 Biotin synthase [bioB]. 15 322 40.721 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BAMF_1920 46b7960146da04d6b614151769c914f8 339 SMART SM00876 231 321 1.5E-32 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BAMF_1920 46b7960146da04d6b614151769c914f8 339 PIRSF PIRSF001619 1 328 9.6E-127 T 12-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BAMF_1920 46b7960146da04d6b614151769c914f8 339 SMART SM00729 55 263 5.0E-34 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BAMF_1920 46b7960146da04d6b614151769c914f8 339 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 231 320 9.8E-15 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BAMF_1920 46b7960146da04d6b614151769c914f8 339 Pfam PF04055 Radical SAM superfamily 65 220 3.6E-16 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BAMF_3387 1bead2b261bc4d0c89cd3b2dead38bc7 94 Pfam PF10719 Late competence development protein ComFB 4 84 2.5E-12 T 12-10-2018 IPR019657 Late competence development protein ComFB BAMF_1290 88cbc2a7d553e2822f73cb8633aaee54 470 Pfam PF07690 Major Facilitator Superfamily 23 416 1.5E-44 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_1290 88cbc2a7d553e2822f73cb8633aaee54 470 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 425 5.8E-88 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BAMF_1290 88cbc2a7d553e2822f73cb8633aaee54 470 SUPERFAMILY SSF103473 7 465 1.12E-66 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_1290 88cbc2a7d553e2822f73cb8633aaee54 470 Gene3D G3DSA:1.20.1250.20 261 469 2.1E-21 T 12-10-2018 BAMF_1290 88cbc2a7d553e2822f73cb8633aaee54 470 Gene3D G3DSA:1.20.1720.10 19 254 2.6E-42 T 12-10-2018 BAMF_2746 9a02a95e19ffe120cbca4912516987b6 276 Gene3D G3DSA:3.40.50.10330 44 275 1.6E-74 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BAMF_2746 9a02a95e19ffe120cbca4912516987b6 276 SUPERFAMILY SSF111331 18 274 1.96E-54 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BAMF_2746 9a02a95e19ffe120cbca4912516987b6 276 Pfam PF01513 ATP-NAD kinase 26 260 2.3E-12 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BAMF_2746 9a02a95e19ffe120cbca4912516987b6 276 Gene3D G3DSA:2.60.200.30 117 253 1.6E-74 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BAMF_2746 9a02a95e19ffe120cbca4912516987b6 276 Hamap MF_00361 NAD kinase [nadK]. 14 276 21.659 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BAMF_0232 cda42ef43b60c2911c3e36e8a5f34803 312 Gene3D G3DSA:3.10.180.10 7 303 1.9E-121 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_0232 cda42ef43b60c2911c3e36e8a5f34803 312 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 266 1.0E-36 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BAMF_0232 cda42ef43b60c2911c3e36e8a5f34803 312 Gene3D G3DSA:3.10.180.10 67 210 1.9E-121 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_0232 cda42ef43b60c2911c3e36e8a5f34803 312 SUPERFAMILY SSF54593 4 282 2.96E-47 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_1652 458d417509ca524413f092f80942609e 214 SUPERFAMILY SSF63862 133 211 8.24E-14 T 12-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 BAMF_1652 458d417509ca524413f092f80942609e 214 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 144 207 9.1E-15 T 12-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 BAMF_1652 458d417509ca524413f092f80942609e 214 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 4 210 4.1E-66 T 12-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 BAMF_1652 458d417509ca524413f092f80942609e 214 SMART SM00983 142 208 4.3E-25 T 12-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 BAMF_1652 458d417509ca524413f092f80942609e 214 SUPERFAMILY SSF63999 1 131 1.26E-35 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 BAMF_1652 458d417509ca524413f092f80942609e 214 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 22 125 5.9E-21 T 12-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 BAMF_1652 458d417509ca524413f092f80942609e 214 Gene3D G3DSA:3.40.50.10240 1 214 3.2E-79 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 BAMF_1399 3d42d2813ece0892c116ff0b733732f3 169 Gene3D G3DSA:1.10.10.10 23 168 3.1E-39 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1399 3d42d2813ece0892c116ff0b733732f3 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 109 2.1E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1399 3d42d2813ece0892c116ff0b733732f3 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 129 2.1E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1399 3d42d2813ece0892c116ff0b733732f3 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 77 93 2.1E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1399 3d42d2813ece0892c116ff0b733732f3 169 SMART SM00347 53 151 5.4E-24 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1399 3d42d2813ece0892c116ff0b733732f3 169 SUPERFAMILY SSF46785 25 167 3.8E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1399 3d42d2813ece0892c116ff0b733732f3 169 Pfam PF01047 MarR family 61 118 2.4E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_2758 750f35d5e0b236b40cba6db00f78447b 200 SMART SM01390 3 91 4.3E-46 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 BAMF_2758 750f35d5e0b236b40cba6db00f78447b 200 Pfam PF01479 S4 domain 93 139 3.9E-21 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_2758 750f35d5e0b236b40cba6db00f78447b 200 SUPERFAMILY SSF55174 2 200 2.22E-67 T 12-10-2018 BAMF_2758 750f35d5e0b236b40cba6db00f78447b 200 Gene3D G3DSA:1.10.1050.10 6 200 1.6E-76 T 12-10-2018 BAMF_2758 750f35d5e0b236b40cba6db00f78447b 200 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 90 2.9E-28 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 BAMF_2758 750f35d5e0b236b40cba6db00f78447b 200 ProSitePatterns PS00632 Ribosomal protein S4 signature. 90 114 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_2758 750f35d5e0b236b40cba6db00f78447b 200 SMART SM00363 92 156 2.5E-18 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_2758 750f35d5e0b236b40cba6db00f78447b 200 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 200 36.265 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BAMF_2758 750f35d5e0b236b40cba6db00f78447b 200 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 200 7.7E-86 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BAMF_2758 750f35d5e0b236b40cba6db00f78447b 200 Gene3D G3DSA:3.10.290.10 91 185 1.6E-76 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BAMF_2018 fc3c7ab6397017cdecf7abb8862043d3 221 Pfam PF02585 GlcNAc-PI de-N-acetylase 6 135 1.8E-25 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 BAMF_2018 fc3c7ab6397017cdecf7abb8862043d3 221 SUPERFAMILY SSF102588 2 212 3.66E-50 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 BAMF_2018 fc3c7ab6397017cdecf7abb8862043d3 221 TIGRFAM TIGR04000 thiol_BshB2: bacillithiol biosynthesis deacetylase BshB2 3 219 8.7E-110 T 12-10-2018 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 BAMF_2018 fc3c7ab6397017cdecf7abb8862043d3 221 Gene3D G3DSA:3.40.50.10320 1 214 5.6E-47 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 BAMF_0272 8b60106484c382977188dfc3f1fa5168 373 PIRSF PIRSF005962 1 373 3.4E-106 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BAMF_0272 8b60106484c382977188dfc3f1fa5168 373 Pfam PF01546 Peptidase family M20/M25/M40 69 368 1.4E-24 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BAMF_0272 8b60106484c382977188dfc3f1fa5168 373 Gene3D G3DSA:3.40.630.10 13 355 1.8E-86 T 12-10-2018 BAMF_0272 8b60106484c382977188dfc3f1fa5168 373 Pfam PF07687 Peptidase dimerisation domain 174 267 7.0E-10 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain BAMF_0272 8b60106484c382977188dfc3f1fa5168 373 SUPERFAMILY SSF53187 5 369 2.86E-63 T 12-10-2018 BAMF_0272 8b60106484c382977188dfc3f1fa5168 373 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 12 359 3.8E-104 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BAMF_0272 8b60106484c382977188dfc3f1fa5168 373 Gene3D G3DSA:3.30.70.360 169 281 1.8E-86 T 12-10-2018 BAMF_0272 8b60106484c382977188dfc3f1fa5168 373 SUPERFAMILY SSF55031 172 283 1.33E-20 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 SMART SM00874 411 479 1.1E-27 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 Gene3D G3DSA:3.30.930.10 495 698 6.9E-60 T 12-10-2018 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 SUPERFAMILY SSF55681 475 697 1.99E-50 T 12-10-2018 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 Gene3D G3DSA:3.50.40.10 204 405 5.0E-82 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 SUPERFAMILY SSF56037 209 405 9.15E-71 T 12-10-2018 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 Gene3D G3DSA:3.30.56.10 4 189 3.7E-68 T 12-10-2018 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 SMART SM00896 710 803 4.0E-45 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 803 2.3E-268 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 797 46.046 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 Gene3D G3DSA:3.30.56.10 410 483 2.0E-25 T 12-10-2018 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 SUPERFAMILY SSF54991 705 803 1.44E-31 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 Pfam PF03147 Ferredoxin-fold anticodon binding domain 710 803 3.9E-29 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 SMART SM00873 221 394 4.8E-90 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 Pfam PF01588 Putative tRNA binding domain 46 152 4.0E-27 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 Pfam PF03483 B3/4 domain 222 394 1.2E-64 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 SUPERFAMILY SSF46955 413 483 1.92E-19 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 Gene3D G3DSA:3.30.70.380 711 803 2.5E-31 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 Gene3D G3DSA:2.40.50.140 40 161 3.7E-68 T 12-10-2018 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 Pfam PF03484 tRNA synthetase B5 domain 414 479 2.0E-20 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BAMF_2669 074d51d5d7bebf95d757ef50f36563db 804 SUPERFAMILY SSF50249 36 199 5.63E-46 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_3237 433150352daa36b33b88ebef5dffee19 185 PIRSF PIRSF006707 2 184 2.2E-47 T 12-10-2018 IPR026282 DNA-binding protein, MJ1563 type BAMF_3237 433150352daa36b33b88ebef5dffee19 185 SUPERFAMILY SSF46785 9 160 3.64E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3237 433150352daa36b33b88ebef5dffee19 185 Gene3D G3DSA:1.10.10.10 7 91 3.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3237 433150352daa36b33b88ebef5dffee19 185 Pfam PF12802 MarR family 28 79 2.4E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 Pfam PF01624 MutS domain I 6 117 6.2E-47 T 12-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 677 693 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 SMART SM00533 271 579 4.0E-114 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 Gene3D G3DSA:1.10.1420.10 388 524 7.0E-101 T 12-10-2018 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 Pfam PF05192 MutS domain III 259 548 2.8E-45 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 5 853 25.446 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 SUPERFAMILY SSF53150 115 267 2.49E-28 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 SUPERFAMILY SSF48334 254 553 1.44E-87 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 Gene3D G3DSA:3.40.1170.10 1 118 3.1E-49 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 Gene3D G3DSA:3.30.420.110 125 248 1.5E-11 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 SMART SM00534 596 783 8.4E-125 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 5 859 0.0 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 Gene3D G3DSA:1.10.1420.10 253 548 7.0E-101 T 12-10-2018 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 SUPERFAMILY SSF52540 556 787 4.04E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 Pfam PF00488 MutS domain V 600 786 4.4E-85 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 PIRSF PIRSF037677 171 841 9.3E-130 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 PIRSF PIRSF037677 1 177 2.6E-30 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 Pfam PF05190 MutS family domain IV 416 507 4.9E-29 T 12-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 SUPERFAMILY SSF55271 3 113 1.31E-42 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 Pfam PF05188 MutS domain II 126 240 1.7E-10 T 12-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 BAMF_1776 68d835f9c93b71c8f46638b29b656080 862 Gene3D G3DSA:3.40.50.300 558 862 1.4E-102 T 12-10-2018 BAMF_1763 3254e18d8294d483c01f020e0c59a4fe 295 SUPERFAMILY SSF47413 3 75 8.89E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_1763 3254e18d8294d483c01f020e0c59a4fe 295 SMART SM00530 7 68 6.6E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_1763 3254e18d8294d483c01f020e0c59a4fe 295 Pfam PF13413 Helix-turn-helix domain 7 67 1.1E-22 T 12-10-2018 BAMF_1763 3254e18d8294d483c01f020e0c59a4fe 295 Pfam PF13464 Domain of unknown function (DUF4115) 215 275 3.0E-11 T 12-10-2018 IPR025194 Domain of unknown function DUF4115 BAMF_1763 3254e18d8294d483c01f020e0c59a4fe 295 Gene3D G3DSA:1.10.260.40 1 104 4.5E-29 T 12-10-2018 BAMF_3643 6832da75b9a936ad59747851e247a350 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 163 1.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3643 6832da75b9a936ad59747851e247a350 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 100 111 1.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3643 6832da75b9a936ad59747851e247a350 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 194 1.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3643 6832da75b9a936ad59747851e247a350 283 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 42 278 1.0E-50 T 12-10-2018 BAMF_3643 6832da75b9a936ad59747851e247a350 283 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 162 190 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_3643 6832da75b9a936ad59747851e247a350 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 165 4.1E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3643 6832da75b9a936ad59747851e247a350 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 100 111 4.1E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3643 6832da75b9a936ad59747851e247a350 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 35 52 4.1E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3643 6832da75b9a936ad59747851e247a350 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 213 4.1E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3643 6832da75b9a936ad59747851e247a350 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 243 263 4.1E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3643 6832da75b9a936ad59747851e247a350 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 194 4.1E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3643 6832da75b9a936ad59747851e247a350 283 SUPERFAMILY SSF51735 33 279 1.44E-70 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3643 6832da75b9a936ad59747851e247a350 283 Gene3D G3DSA:3.40.50.720 27 282 1.7E-74 T 12-10-2018 BAMF_2441 0039c6cd735c392055083a6cb99cff05 256 Pfam PF04452 RNA methyltransferase 20 247 1.4E-75 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BAMF_2441 0039c6cd735c392055083a6cb99cff05 256 Gene3D G3DSA:3.40.1280.10 1 256 5.9E-98 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BAMF_2441 0039c6cd735c392055083a6cb99cff05 256 SUPERFAMILY SSF75217 74 251 1.35E-54 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases BAMF_2441 0039c6cd735c392055083a6cb99cff05 256 PIRSF PIRSF015601 1 251 2.7E-63 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BAMF_2441 0039c6cd735c392055083a6cb99cff05 256 SUPERFAMILY SSF88697 2 71 1.09E-14 T 12-10-2018 IPR015947 PUA-like superfamily BAMF_2441 0039c6cd735c392055083a6cb99cff05 256 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 251 1.2E-82 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BAMF_0762 c2b4acee3a4a0841f3427562a28f9acf 392 Gene3D G3DSA:1.20.1250.20 3 181 1.0E-21 T 12-10-2018 BAMF_0762 c2b4acee3a4a0841f3427562a28f9acf 392 Pfam PF07690 Major Facilitator Superfamily 211 386 8.8E-24 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0762 c2b4acee3a4a0841f3427562a28f9acf 392 SUPERFAMILY SSF103473 4 379 3.53E-54 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0762 c2b4acee3a4a0841f3427562a28f9acf 392 Pfam PF00083 Sugar (and other) transporter 41 176 1.5E-5 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BAMF_0762 c2b4acee3a4a0841f3427562a28f9acf 392 Gene3D G3DSA:1.20.1250.20 198 391 1.5E-25 T 12-10-2018 BAMF_2002 d63b2e0c078110ad3a816486a0bdceaa 495 Pfam PF00171 Aldehyde dehydrogenase family 29 489 2.1E-191 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BAMF_2002 d63b2e0c078110ad3a816486a0bdceaa 495 PIRSF PIRSF036492 42 494 1.5E-84 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 BAMF_2002 d63b2e0c078110ad3a816486a0bdceaa 495 SUPERFAMILY SSF53720 12 492 9.82E-186 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BAMF_2002 d63b2e0c078110ad3a816486a0bdceaa 495 Gene3D G3DSA:3.40.605.10 24 487 4.5E-203 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BAMF_2002 d63b2e0c078110ad3a816486a0bdceaa 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BAMF_2002 d63b2e0c078110ad3a816486a0bdceaa 495 Gene3D G3DSA:3.40.309.10 270 459 4.5E-203 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BAMF_0783 497a02bbc54d1ba9a25c3e02397ca16e 397 SUPERFAMILY SSF47005 112 156 1.11E-10 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BAMF_0783 497a02bbc54d1ba9a25c3e02397ca16e 397 Gene3D G3DSA:3.30.559.10 158 394 9.9E-86 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_0783 497a02bbc54d1ba9a25c3e02397ca16e 397 SUPERFAMILY SSF51230 1 96 2.09E-24 T 12-10-2018 IPR011053 Single hybrid motif BAMF_0783 497a02bbc54d1ba9a25c3e02397ca16e 397 Gene3D G3DSA:2.40.50.100 2 100 4.7E-26 T 12-10-2018 BAMF_0783 497a02bbc54d1ba9a25c3e02397ca16e 397 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 171 396 2.2E-80 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BAMF_0783 497a02bbc54d1ba9a25c3e02397ca16e 397 Gene3D G3DSA:4.10.320.10 112 157 1.3E-13 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BAMF_0783 497a02bbc54d1ba9a25c3e02397ca16e 397 Pfam PF00364 Biotin-requiring enzyme 4 76 1.5E-16 T 12-10-2018 IPR000089 Biotin/lipoyl attachment BAMF_0783 497a02bbc54d1ba9a25c3e02397ca16e 397 SUPERFAMILY SSF52777 172 396 2.71E-79 T 12-10-2018 BAMF_0783 497a02bbc54d1ba9a25c3e02397ca16e 397 Pfam PF02817 e3 binding domain 117 151 8.3E-12 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BAMF_2791 0bc10e226101ef85f6cd809b0212b121 92 Pfam PF14165 YtzH-like protein 3 88 3.3E-36 T 12-10-2018 IPR025547 YtzH-like protein BAMF_2822 30ae25b203cf77f906407ce75db35e66 231 SMART SM00862 148 223 2.2E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_2822 30ae25b203cf77f906407ce75db35e66 231 SUPERFAMILY SSF46894 131 222 4.54E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_2822 30ae25b203cf77f906407ce75db35e66 231 SMART SM00448 2 112 3.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2822 30ae25b203cf77f906407ce75db35e66 231 SUPERFAMILY SSF52172 1 128 2.56E-32 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_2822 30ae25b203cf77f906407ce75db35e66 231 Gene3D G3DSA:1.10.10.10 130 228 1.2E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2822 30ae25b203cf77f906407ce75db35e66 231 Gene3D G3DSA:3.40.50.2300 1 121 9.3E-27 T 12-10-2018 BAMF_2822 30ae25b203cf77f906407ce75db35e66 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 222 8.1E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_2822 30ae25b203cf77f906407ce75db35e66 231 Pfam PF00072 Response regulator receiver domain 4 113 5.4E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_1928 bda4e69a27974dd0d83ca459680351a2 509 Gene3D G3DSA:3.90.226.10 246 508 1.6E-82 T 12-10-2018 BAMF_1928 bda4e69a27974dd0d83ca459680351a2 509 Pfam PF01039 Carboxyl transferase domain 26 506 3.8E-161 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 BAMF_1928 bda4e69a27974dd0d83ca459680351a2 509 SUPERFAMILY SSF52096 236 508 7.33E-81 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_1928 bda4e69a27974dd0d83ca459680351a2 509 SUPERFAMILY SSF52096 8 249 2.28E-65 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_1928 bda4e69a27974dd0d83ca459680351a2 509 Gene3D G3DSA:3.90.226.10 2 245 1.4E-75 T 12-10-2018 BAMF_2079 07ba6e90ed01001a067247ce19830423 328 Gene3D G3DSA:1.10.8.60 158 231 5.8E-12 T 12-10-2018 BAMF_2079 07ba6e90ed01001a067247ce19830423 328 Gene3D G3DSA:3.40.50.300 10 157 2.3E-31 T 12-10-2018 BAMF_2079 07ba6e90ed01001a067247ce19830423 328 Pfam PF00158 Sigma-54 interaction domain 14 150 2.2E-21 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BAMF_2079 07ba6e90ed01001a067247ce19830423 328 SUPERFAMILY SSF52540 15 225 3.55E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2079 07ba6e90ed01001a067247ce19830423 328 SUPERFAMILY SSF46785 266 319 2.4E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2079 07ba6e90ed01001a067247ce19830423 328 Gene3D G3DSA:1.10.10.10 235 328 2.7E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3110 4cbbe166daa9a976ed8f3ce2fe21127a 261 Pfam PF00005 ABC transporter 21 173 2.2E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3110 4cbbe166daa9a976ed8f3ce2fe21127a 261 SUPERFAMILY SSF52540 6 232 1.08E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3110 4cbbe166daa9a976ed8f3ce2fe21127a 261 SMART SM00382 30 225 6.5E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3110 4cbbe166daa9a976ed8f3ce2fe21127a 261 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 6 246 9.4E-114 T 12-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 BAMF_3110 4cbbe166daa9a976ed8f3ce2fe21127a 261 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3110 4cbbe166daa9a976ed8f3ce2fe21127a 261 Gene3D G3DSA:3.40.50.300 5 250 1.0E-54 T 12-10-2018 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 Gene3D G3DSA:1.10.8.60 715 811 2.5E-27 T 12-10-2018 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 8.3E-17 T 12-10-2018 IPR004176 Clp, N-terminal BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 144 2.0E-18 T 12-10-2018 IPR004176 Clp, N-terminal BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 572 590 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 SUPERFAMILY SSF52540 162 469 2.38E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 SUPERFAMILY SSF52540 487 803 6.75E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 663 1.0E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 616 634 1.0E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 542 560 1.0E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 587 605 1.0E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 Gene3D G3DSA:3.40.50.300 490 713 1.4E-90 T 12-10-2018 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 Pfam PF07724 AAA domain (Cdc48 subfamily) 537 709 2.4E-57 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 Gene3D G3DSA:1.10.1780.10 1 151 1.2E-60 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 SUPERFAMILY SSF81923 5 150 3.34E-33 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 Gene3D G3DSA:4.10.860.10 410 468 7.0E-54 T 12-10-2018 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 Gene3D G3DSA:1.10.8.60 347 482 7.0E-54 T 12-10-2018 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 Pfam PF02151 UvrB/uvrC motif 418 453 5.0E-7 T 12-10-2018 IPR001943 UVR domain GO:0005515 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 Gene3D G3DSA:3.40.50.300 153 344 3.4E-72 T 12-10-2018 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 206 318 1.6E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 SMART SM01086 715 804 4.9E-35 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 SMART SM00382 538 716 3.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 SMART SM00382 201 345 1.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0085 fef0ef514f2e7f8772ca352d2ba00db8 811 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 715 794 9.3E-25 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BAMF_2539 2bb6a84218c7f52c3a7921bdf08de6b2 584 SUPERFAMILY SSF56601 188 579 8.64E-62 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_2539 2bb6a84218c7f52c3a7921bdf08de6b2 584 Gene3D G3DSA:3.40.710.10 237 584 6.3E-70 T 12-10-2018 BAMF_2539 2bb6a84218c7f52c3a7921bdf08de6b2 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 573 1.3E-58 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BAMF_2539 2bb6a84218c7f52c3a7921bdf08de6b2 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 219 1.8E-5 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BAMF_2539 2bb6a84218c7f52c3a7921bdf08de6b2 584 SUPERFAMILY SSF56519 50 223 3.01E-20 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BAMF_2539 2bb6a84218c7f52c3a7921bdf08de6b2 584 Gene3D G3DSA:3.90.1310.30 50 232 9.6E-16 T 12-10-2018 BAMF_3691 d19c5d67a9ae04c4f2596ab7d4ee02f7 651 Pfam PF08279 HTH domain 5 63 2.7E-11 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BAMF_3691 d19c5d67a9ae04c4f2596ab7d4ee02f7 651 SUPERFAMILY SSF63520 185 281 1.44E-15 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BAMF_3691 d19c5d67a9ae04c4f2596ab7d4ee02f7 651 SUPERFAMILY SSF52794 409 487 7.85E-6 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BAMF_3691 d19c5d67a9ae04c4f2596ab7d4ee02f7 651 SUPERFAMILY SSF46785 2 64 6.8E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3691 d19c5d67a9ae04c4f2596ab7d4ee02f7 651 Pfam PF05043 Mga helix-turn-helix domain 78 166 8.3E-18 T 12-10-2018 IPR007737 Mga helix-turn-helix domain BAMF_3691 d19c5d67a9ae04c4f2596ab7d4ee02f7 651 Gene3D G3DSA:1.10.10.10 3 149 3.4E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3691 d19c5d67a9ae04c4f2596ab7d4ee02f7 651 Pfam PF00874 PRD domain 203 281 3.3E-14 T 12-10-2018 IPR011608 PRD domain GO:0006355 BAMF_3691 d19c5d67a9ae04c4f2596ab7d4ee02f7 651 Pfam PF00874 PRD domain 309 398 3.4E-23 T 12-10-2018 IPR011608 PRD domain GO:0006355 BAMF_3691 d19c5d67a9ae04c4f2596ab7d4ee02f7 651 Gene3D G3DSA:3.40.930.10 498 640 2.1E-28 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BAMF_3691 d19c5d67a9ae04c4f2596ab7d4ee02f7 651 SUPERFAMILY SSF55804 499 638 2.88E-30 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BAMF_3691 d19c5d67a9ae04c4f2596ab7d4ee02f7 651 Gene3D G3DSA:1.10.1790.10 188 283 3.0E-11 T 12-10-2018 BAMF_3691 d19c5d67a9ae04c4f2596ab7d4ee02f7 651 Gene3D G3DSA:1.10.1790.10 300 400 1.7E-24 T 12-10-2018 BAMF_3691 d19c5d67a9ae04c4f2596ab7d4ee02f7 651 SUPERFAMILY SSF63520 299 402 2.35E-24 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BAMF_3691 d19c5d67a9ae04c4f2596ab7d4ee02f7 651 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 501 638 5.4E-32 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BAMF_3691 d19c5d67a9ae04c4f2596ab7d4ee02f7 651 Gene3D G3DSA:3.40.50.2300 409 497 3.3E-8 T 12-10-2018 BAMF_3060 edc2fc3d55ad83e92e967d06a0dd675d 160 TIGRFAM TIGR04034 export_SdpA: antimicrobial peptide system protein, SdpA family 11 158 3.6E-34 T 12-10-2018 IPR023902 Sporulation delaying protein SdpA BAMF_3060 edc2fc3d55ad83e92e967d06a0dd675d 160 Pfam PF17418 Sporulation delaying protein SdpA 26 159 6.6E-33 T 12-10-2018 IPR023902 Sporulation delaying protein SdpA BAMF_3060 edc2fc3d55ad83e92e967d06a0dd675d 160 ProDom PD034336 YITP MEMBRANE YVAW TRANSMEMBRANE 23 157 1.0E-21 T 12-10-2018 IPR023902 Sporulation delaying protein SdpA BAMF_2631 766216ca07c0b74d00055d8fc246bfb6 334 SUPERFAMILY SSF48452 14 121 2.02E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_2631 766216ca07c0b74d00055d8fc246bfb6 334 Gene3D G3DSA:1.25.40.10 6 190 8.9E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_2631 766216ca07c0b74d00055d8fc246bfb6 334 Pfam PF14559 Tetratricopeptide repeat 27 81 5.7E-10 T 12-10-2018 BAMF_2631 766216ca07c0b74d00055d8fc246bfb6 334 SUPERFAMILY SSF116965 82 291 8.89E-8 T 12-10-2018 BAMF_1111 ea26aaddb7a94d03243f5c20921879bf 346 PIRSF PIRSF001123 4 343 2.9E-39 T 12-10-2018 IPR008007 Peptidase M42 BAMF_1111 ea26aaddb7a94d03243f5c20921879bf 346 SUPERFAMILY SSF53187 6 342 3.73E-55 T 12-10-2018 BAMF_1111 ea26aaddb7a94d03243f5c20921879bf 346 SUPERFAMILY SSF101821 73 185 3.51E-32 T 12-10-2018 BAMF_1111 ea26aaddb7a94d03243f5c20921879bf 346 Gene3D G3DSA:3.40.630.10 13 341 1.2E-123 T 12-10-2018 BAMF_1111 ea26aaddb7a94d03243f5c20921879bf 346 Pfam PF05343 M42 glutamyl aminopeptidase 48 336 4.0E-88 T 12-10-2018 IPR008007 Peptidase M42 BAMF_1111 ea26aaddb7a94d03243f5c20921879bf 346 Gene3D G3DSA:2.40.30.40 76 170 1.2E-123 T 12-10-2018 IPR023367 Peptidase M42, domain 2 BAMF_0573 9cf0e5e1d41467cf1d239d17f3405819 171 Gene3D G3DSA:1.10.10.10 82 165 1.3E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0573 9cf0e5e1d41467cf1d239d17f3405819 171 SUPERFAMILY SSF88659 95 163 1.51E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_0573 9cf0e5e1d41467cf1d239d17f3405819 171 Pfam PF08281 Sigma-70, region 4 107 159 2.8E-15 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_0573 9cf0e5e1d41467cf1d239d17f3405819 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 162 2.8E-15 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 Gene3D G3DSA:1.10.460.10 160 591 2.9E-147 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 SMART SM00436 126 216 9.5E-45 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 305 314 1.4E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 511 525 1.4E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 1.4E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 186 204 1.4E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 387 403 1.4E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 SMART SM00493 3 126 5.9E-22 T 12-10-2018 IPR006171 TOPRIM domain BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 Pfam PF01751 Toprim domain 5 134 4.9E-14 T 12-10-2018 IPR006171 TOPRIM domain BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 Gene3D G3DSA:2.70.20.10 210 476 2.9E-147 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 SUPERFAMILY SSF56712 3 598 1.06E-175 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 Gene3D G3DSA:3.40.50.140 3 154 1.7E-52 T 12-10-2018 BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 Pfam PF01131 DNA topoisomerase 152 582 1.7E-123 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 Gene3D G3DSA:1.10.290.10 271 401 2.9E-147 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 Hamap MF_00953 DNA topoisomerase 3 [topB]. 3 637 69.281 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 728 0.0 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 299 314 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 BAMF_0392 19355bd17e3bc41709747cc7266349e7 728 SMART SM00437 262 548 3.4E-112 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 BAMF_2097 08a638364fb0bbdd6fd04b1cc92c51ea 223 Pfam PF13456 Reverse transcriptase-like 79 204 1.6E-16 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 BAMF_2097 08a638364fb0bbdd6fd04b1cc92c51ea 223 SUPERFAMILY SSF53098 73 208 3.92E-21 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BAMF_2097 08a638364fb0bbdd6fd04b1cc92c51ea 223 Gene3D G3DSA:3.30.420.10 74 216 5.4E-28 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BAMF_3774 913fec71d46318162be7e0cf5693aa14 115 SUPERFAMILY SSF159121 29 115 2.22E-27 T 12-10-2018 IPR036166 YxeA-like superfamily BAMF_3774 913fec71d46318162be7e0cf5693aa14 115 Pfam PF06486 Protein of unknown function (DUF1093) 34 103 1.5E-20 T 12-10-2018 IPR006542 Protein of unknown function DUF1093 BAMF_3774 913fec71d46318162be7e0cf5693aa14 115 Gene3D G3DSA:2.40.50.480 29 115 1.3E-34 T 12-10-2018 IPR036166 YxeA-like superfamily BAMF_3774 913fec71d46318162be7e0cf5693aa14 115 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 1 114 1.4E-41 T 12-10-2018 IPR006542 Protein of unknown function DUF1093 BAMF_2166 cef2c9fa09cc627cf0d5a32f7f867697 217 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 7 206 1.9E-46 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 BAMF_2166 cef2c9fa09cc627cf0d5a32f7f867697 217 SUPERFAMILY SSF51366 6 208 1.88E-43 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BAMF_2166 cef2c9fa09cc627cf0d5a32f7f867697 217 Gene3D G3DSA:3.20.20.70 5 213 9.3E-51 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_2166 cef2c9fa09cc627cf0d5a32f7f867697 217 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 212 31.351 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 BAMF_0822 3d6457a25d2e3cc75b5b1d2264421520 326 SUPERFAMILY SSF53448 3 251 1.9E-38 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0822 3d6457a25d2e3cc75b5b1d2264421520 326 Gene3D G3DSA:3.90.550.10 1 194 9.9E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0822 3d6457a25d2e3cc75b5b1d2264421520 326 Pfam PF00535 Glycosyl transferase family 2 7 168 1.1E-34 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BAMF_0428 b181a4d0ffae0cc9679823de0ee17522 381 SUPERFAMILY SSF47203 235 370 7.89E-26 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BAMF_0428 b181a4d0ffae0cc9679823de0ee17522 381 Gene3D G3DSA:2.40.110.10 134 224 3.7E-20 T 12-10-2018 BAMF_0428 b181a4d0ffae0cc9679823de0ee17522 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 216 2.3E-13 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BAMF_0428 b181a4d0ffae0cc9679823de0ee17522 381 PIRSF PIRSF016578 134 380 1.2E-27 T 12-10-2018 BAMF_0428 b181a4d0ffae0cc9679823de0ee17522 381 PIRSF PIRSF016578 1 108 3.0E-11 T 12-10-2018 BAMF_0428 b181a4d0ffae0cc9679823de0ee17522 381 Gene3D G3DSA:1.10.540.10 5 121 1.8E-24 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BAMF_0428 b181a4d0ffae0cc9679823de0ee17522 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 95 5.1E-13 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BAMF_0428 b181a4d0ffae0cc9679823de0ee17522 381 SUPERFAMILY SSF56645 19 224 1.2E-43 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BAMF_0428 b181a4d0ffae0cc9679823de0ee17522 381 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 242 360 1.4E-18 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain BAMF_0428 b181a4d0ffae0cc9679823de0ee17522 381 Gene3D G3DSA:1.20.140.10 236 376 7.1E-30 T 12-10-2018 BAMF_1216 c51018e0e4342ef977c303e05c46114e 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 466 1.9E-87 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain BAMF_1216 c51018e0e4342ef977c303e05c46114e 544 SUPERFAMILY SSF53850 35 540 7.42E-135 T 12-10-2018 BAMF_1216 c51018e0e4342ef977c303e05c46114e 544 Gene3D G3DSA:3.90.76.10 71 193 4.2E-171 T 12-10-2018 BAMF_1216 c51018e0e4342ef977c303e05c46114e 544 Gene3D G3DSA:3.40.190.10 51 530 4.2E-171 T 12-10-2018 BAMF_1216 c51018e0e4342ef977c303e05c46114e 544 PIRSF PIRSF002741 1 544 1.2E-145 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BAMF_1216 c51018e0e4342ef977c303e05c46114e 544 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 109 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site BAMF_1216 c51018e0e4342ef977c303e05c46114e 544 Gene3D G3DSA:3.10.105.10 299 517 4.2E-171 T 12-10-2018 BAMF_0051 bf635712c7a8bbcdc51ed9e3ddbabe6a 317 SUPERFAMILY SSF53271 75 308 1.14E-68 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BAMF_0051 bf635712c7a8bbcdc51ed9e3ddbabe6a 317 Gene3D G3DSA:3.40.50.2020 153 293 2.9E-128 T 12-10-2018 BAMF_0051 bf635712c7a8bbcdc51ed9e3ddbabe6a 317 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 10 317 51.37 T 12-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 BAMF_0051 bf635712c7a8bbcdc51ed9e3ddbabe6a 317 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 134 149 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 BAMF_0051 bf635712c7a8bbcdc51ed9e3ddbabe6a 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 11 317 6.7E-132 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BAMF_0051 bf635712c7a8bbcdc51ed9e3ddbabe6a 317 SMART SM01400 10 126 1.9E-82 T 12-10-2018 BAMF_0051 bf635712c7a8bbcdc51ed9e3ddbabe6a 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 206 316 6.2E-27 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BAMF_0051 bf635712c7a8bbcdc51ed9e3ddbabe6a 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 126 1.4E-52 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BAMF_0051 bf635712c7a8bbcdc51ed9e3ddbabe6a 317 Gene3D G3DSA:3.40.50.2020 13 305 2.9E-128 T 12-10-2018 BAMF_3190 6ec11b73fd16bbfa3bb2174d7c612320 571 SUPERFAMILY SSF56014 429 561 5.5E-36 T 12-10-2018 BAMF_3190 6ec11b73fd16bbfa3bb2174d7c612320 571 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 431 559 4.8E-4 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_3190 6ec11b73fd16bbfa3bb2174d7c612320 571 Gene3D G3DSA:3.30.413.10 427 568 4.1E-38 T 12-10-2018 BAMF_3190 6ec11b73fd16bbfa3bb2174d7c612320 571 PRINTS PR00397 Sirohaem Fe-binding site signature 479 497 1.6E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_3190 6ec11b73fd16bbfa3bb2174d7c612320 571 PRINTS PR00397 Sirohaem Fe-binding site signature 431 449 1.6E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_3190 6ec11b73fd16bbfa3bb2174d7c612320 571 SUPERFAMILY SSF55124 346 422 6.21E-22 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_3190 6ec11b73fd16bbfa3bb2174d7c612320 571 SUPERFAMILY SSF55124 13 145 8.18E-33 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_3190 6ec11b73fd16bbfa3bb2174d7c612320 571 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 479 495 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_3190 6ec11b73fd16bbfa3bb2174d7c612320 571 SUPERFAMILY SSF56014 146 344 5.23E-58 T 12-10-2018 BAMF_3190 6ec11b73fd16bbfa3bb2174d7c612320 571 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 17 560 1.8E-285 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_3190 6ec11b73fd16bbfa3bb2174d7c612320 571 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 170 330 5.1E-47 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_3190 6ec11b73fd16bbfa3bb2174d7c612320 571 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 417 1.7E-13 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_3190 6ec11b73fd16bbfa3bb2174d7c612320 571 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 75 136 1.1E-13 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_3190 6ec11b73fd16bbfa3bb2174d7c612320 571 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 8 571 58.385 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_1314 8760a209d791b91bd296b11f6459941c 88 SUPERFAMILY SSF52540 22 75 2.39E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1314 8760a209d791b91bd296b11f6459941c 88 Gene3D G3DSA:3.40.50.300 1 86 1.2E-16 T 12-10-2018 BAMF_1314 8760a209d791b91bd296b11f6459941c 88 Pfam PF00005 ABC transporter 27 77 1.3E-11 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_2356 63b5fe1c2fc81b78231a86d2a3c36f8c 278 Gene3D G3DSA:3.30.930.10 5 278 6.8E-70 T 12-10-2018 BAMF_2356 63b5fe1c2fc81b78231a86d2a3c36f8c 278 SUPERFAMILY SSF55681 5 278 2.15E-70 T 12-10-2018 BAMF_2356 63b5fe1c2fc81b78231a86d2a3c36f8c 278 Hamap MF_02118 Octanoyltransferase LipM [lipM]. 3 278 69.101 T 12-10-2018 IPR024898 Octanoyltransferase LipM GO:0009107|GO:0009249|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BAMF_2356 63b5fe1c2fc81b78231a86d2a3c36f8c 278 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 189 3.3E-31 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BAMF_2780 6e973222c9c92bf8bcc947e53223d7a6 860 SUPERFAMILY SSF52540 477 767 4.6E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2780 6e973222c9c92bf8bcc947e53223d7a6 860 Pfam PF01580 FtsK/SpoIIIE family 504 642 1.1E-49 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 BAMF_2780 6e973222c9c92bf8bcc947e53223d7a6 860 SMART SM00843 790 855 1.8E-40 T 12-10-2018 IPR018541 FtsK gamma domain BAMF_2780 6e973222c9c92bf8bcc947e53223d7a6 860 SUPERFAMILY SSF46785 791 855 9.07E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2780 6e973222c9c92bf8bcc947e53223d7a6 860 Gene3D G3DSA:3.30.980.40 397 499 1.6E-36 T 12-10-2018 BAMF_2780 6e973222c9c92bf8bcc947e53223d7a6 860 Gene3D G3DSA:3.40.50.300 501 780 3.3E-112 T 12-10-2018 BAMF_2780 6e973222c9c92bf8bcc947e53223d7a6 860 Pfam PF09397 Ftsk gamma domain 792 853 1.4E-30 T 12-10-2018 IPR018541 FtsK gamma domain BAMF_2780 6e973222c9c92bf8bcc947e53223d7a6 860 Gene3D G3DSA:1.10.10.10 785 851 5.8E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2780 6e973222c9c92bf8bcc947e53223d7a6 860 SMART SM00382 539 716 0.0021 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 389 396 7.7E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 551 559 7.7E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 484 493 7.7E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 528 544 7.7E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 268 278 7.7E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 497 508 7.7E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 459 478 7.7E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 Gene3D G3DSA:2.40.30.10 230 442 1.5E-74 T 12-10-2018 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 Pfam PF00258 Flavodoxin 67 198 2.8E-33 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 Gene3D G3DSA:3.40.50.360 56 216 5.3E-51 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 PIRSF PIRSF000207 1 602 1.3E-271 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 Pfam PF00175 Oxidoreductase NAD-binding domain 460 566 3.2E-18 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 Pfam PF00667 FAD binding domain 230 425 1.7E-33 T 12-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 Gene3D G3DSA:1.20.990.10 278 387 1.5E-74 T 12-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 Gene3D G3DSA:3.40.50.80 448 602 5.2E-61 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 SUPERFAMILY SSF52343 447 602 7.33E-53 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 PRINTS PR00369 Flavodoxin signature 66 79 4.6E-15 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 PRINTS PR00369 Flavodoxin signature 146 156 4.6E-15 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 PRINTS PR00369 Flavodoxin signature 114 125 4.6E-15 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 PRINTS PR00369 Flavodoxin signature 170 189 4.6E-15 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 SUPERFAMILY SSF52218 63 206 1.37E-49 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 SUPERFAMILY SSF63380 227 448 1.2E-65 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BAMF_3191 a7422ec6114052ac51ef1b08d4923bee 602 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 6 602 1.8E-271 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BAMF_1074 4bd94fceda7c7119d27034e954a3abe1 500 SMART SM00729 171 395 1.4E-46 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BAMF_1074 4bd94fceda7c7119d27034e954a3abe1 500 Pfam PF04055 Radical SAM superfamily 179 351 1.7E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BAMF_1074 4bd94fceda7c7119d27034e954a3abe1 500 Gene3D G3DSA:3.80.30.20 131 490 7.8E-67 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BAMF_1074 4bd94fceda7c7119d27034e954a3abe1 500 SUPERFAMILY SSF102114 155 482 4.45E-70 T 12-10-2018 BAMF_1074 4bd94fceda7c7119d27034e954a3abe1 500 TIGRFAM TIGR03994 rSAM_HemZ: coproporphyrinogen dehydrogenase HemZ 88 490 4.9E-150 T 12-10-2018 IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ BAMF_2515 ab4c1afd44c305f0b8621a063faa2b39 315 PIRSF PIRSF036894 3 315 2.1E-130 T 12-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 BAMF_2515 ab4c1afd44c305f0b8621a063faa2b39 315 SUPERFAMILY SSF51182 4 313 2.23E-105 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BAMF_2515 ab4c1afd44c305f0b8621a063faa2b39 315 Gene3D G3DSA:2.60.120.10 1 225 6.6E-95 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_2515 ab4c1afd44c305f0b8621a063faa2b39 315 Pfam PF01238 Phosphomannose isomerase type I 9 196 1.4E-39 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BAMF_2515 ab4c1afd44c305f0b8621a063faa2b39 315 Gene3D G3DSA:2.60.120.10 228 315 1.9E-25 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_2515 ab4c1afd44c305f0b8621a063faa2b39 315 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 101 314 2.5E-56 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BAMF_0377 19420533a1b51272f9b444af7634302f 249 Gene3D G3DSA:1.10.10.10 4 76 2.2E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0377 19420533a1b51272f9b444af7634302f 249 Gene3D G3DSA:3.30.450.40 77 249 2.9E-52 T 12-10-2018 IPR029016 GAF-like domain superfamily BAMF_0377 19420533a1b51272f9b444af7634302f 249 SMART SM00346 5 93 1.5E-26 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BAMF_0377 19420533a1b51272f9b444af7634302f 249 SUPERFAMILY SSF46785 7 76 1.52E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0377 19420533a1b51272f9b444af7634302f 249 Pfam PF01614 Bacterial transcriptional regulator 120 245 1.8E-34 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal BAMF_0377 19420533a1b51272f9b444af7634302f 249 Pfam PF09339 IclR helix-turn-helix domain 8 55 6.3E-10 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BAMF_0377 19420533a1b51272f9b444af7634302f 249 SUPERFAMILY SSF55781 61 249 3.04E-47 T 12-10-2018 BAMF_2941 289a3d024a1cf0abab51426e5eeea95d 166 Pfam PF01037 Lrp/AsnC ligand binding domain 72 144 1.5E-13 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BAMF_2941 289a3d024a1cf0abab51426e5eeea95d 166 SUPERFAMILY SSF46785 3 61 1.48E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2941 289a3d024a1cf0abab51426e5eeea95d 166 Gene3D G3DSA:1.10.10.10 3 54 1.5E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2941 289a3d024a1cf0abab51426e5eeea95d 166 SMART SM00344 3 114 3.3E-5 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BAMF_2941 289a3d024a1cf0abab51426e5eeea95d 166 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 49 6.0E-5 T 12-10-2018 BAMF_2941 289a3d024a1cf0abab51426e5eeea95d 166 Gene3D G3DSA:3.30.70.920 55 153 7.3E-21 T 12-10-2018 BAMF_2941 289a3d024a1cf0abab51426e5eeea95d 166 SUPERFAMILY SSF54909 66 147 2.01E-17 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BAMF_1673 16ab6d4d17e5e48c4c784a4774ff662c 174 Gene3D G3DSA:2.40.30.60 6 94 1.3E-19 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 BAMF_1673 16ab6d4d17e5e48c4c784a4774ff662c 174 Pfam PF05239 PRC-barrel domain 98 171 4.5E-16 T 12-10-2018 IPR027275 PRC-barrel domain BAMF_1673 16ab6d4d17e5e48c4c784a4774ff662c 174 Gene3D G3DSA:2.30.30.240 96 174 3.9E-23 T 12-10-2018 BAMF_1673 16ab6d4d17e5e48c4c784a4774ff662c 174 SUPERFAMILY SSF50447 5 93 9.54E-21 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BAMF_1673 16ab6d4d17e5e48c4c784a4774ff662c 174 SUPERFAMILY SSF50346 101 171 3.61E-20 T 12-10-2018 IPR011033 PRC-barrel-like superfamily BAMF_1673 16ab6d4d17e5e48c4c784a4774ff662c 174 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 5 171 23.524 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BAMF_1673 16ab6d4d17e5e48c4c784a4774ff662c 174 Pfam PF01782 RimM N-terminal domain 8 92 1.4E-21 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 BAMF_1673 16ab6d4d17e5e48c4c784a4774ff662c 174 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 171 2.3E-52 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BAMF_1403 7526a1bc27bed94b8e27d620a56d4e32 375 SUPERFAMILY SSF53448 8 105 3.66E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_1403 7526a1bc27bed94b8e27d620a56d4e32 375 Gene3D G3DSA:3.90.550.10 2 140 4.3E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_1403 7526a1bc27bed94b8e27d620a56d4e32 375 Gene3D G3DSA:1.25.40.10 142 236 4.3E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_1403 7526a1bc27bed94b8e27d620a56d4e32 375 Gene3D G3DSA:1.25.40.10 237 375 1.1E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_1403 7526a1bc27bed94b8e27d620a56d4e32 375 SMART SM00028 245 278 11.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_1403 7526a1bc27bed94b8e27d620a56d4e32 375 SMART SM00028 324 357 25.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_1403 7526a1bc27bed94b8e27d620a56d4e32 375 SMART SM00028 279 312 0.012 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_1403 7526a1bc27bed94b8e27d620a56d4e32 375 Pfam PF00535 Glycosyl transferase family 2 11 95 8.7E-22 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BAMF_1403 7526a1bc27bed94b8e27d620a56d4e32 375 SUPERFAMILY SSF48452 205 359 2.86E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 39.401 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 293 2.1E-20 T 12-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 Gene3D G3DSA:3.40.190.10 4 209 1.2E-87 T 12-10-2018 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 SUPERFAMILY SSF53850 2 216 2.97E-83 T 12-10-2018 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 3.7E-50 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 3.7E-50 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 3.7E-50 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 3.7E-50 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 3.7E-50 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 211 7.2E-82 T 12-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 SUPERFAMILY SSF54782 220 309 2.48E-22 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 Gene3D G3DSA:3.40.190.10 101 201 1.2E-87 T 12-10-2018 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 PIRSF PIRSF001438 1 310 2.8E-124 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 12-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 Gene3D G3DSA:3.30.160.40 220 304 3.8E-28 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_2622 265d2c88ad00628b269b9f4c3d75225e 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 5.5E-112 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_3833 db6a330fcc6cc10c39cf1d36cc991292 517 Pfam PF13245 AAA domain 4 219 4.1E-20 T 12-10-2018 BAMF_3833 db6a330fcc6cc10c39cf1d36cc991292 517 Gene3D G3DSA:3.40.50.300 3 237 5.0E-31 T 12-10-2018 BAMF_3833 db6a330fcc6cc10c39cf1d36cc991292 517 SUPERFAMILY SSF52540 3 483 3.27E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3882 2522d21e60ac930bc7fca1308f560860 219 SMART SM00895 87 211 2.9E-9 T 12-10-2018 IPR011711 GntR, C-terminal BAMF_3882 2522d21e60ac930bc7fca1308f560860 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 75 2.4E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3882 2522d21e60ac930bc7fca1308f560860 219 SUPERFAMILY SSF46785 15 81 9.34E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3882 2522d21e60ac930bc7fca1308f560860 219 Gene3D G3DSA:1.10.10.10 12 78 6.2E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3882 2522d21e60ac930bc7fca1308f560860 219 Gene3D G3DSA:1.20.120.530 81 219 2.3E-19 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BAMF_3882 2522d21e60ac930bc7fca1308f560860 219 Pfam PF07729 FCD domain 89 206 5.4E-18 T 12-10-2018 IPR011711 GntR, C-terminal BAMF_3882 2522d21e60ac930bc7fca1308f560860 219 SMART SM00345 19 77 2.0E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3882 2522d21e60ac930bc7fca1308f560860 219 SUPERFAMILY SSF48008 83 217 1.94E-19 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BAMF_3882 2522d21e60ac930bc7fca1308f560860 219 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 48 67 7.0E-5 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BAMF_3882 2522d21e60ac930bc7fca1308f560860 219 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 48 7.0E-5 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BAMF_3882 2522d21e60ac930bc7fca1308f560860 219 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 4.0E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3882 2522d21e60ac930bc7fca1308f560860 219 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 4.0E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0141 eef8e12edafd89c201e1b546fa7d812a 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.837 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0141 eef8e12edafd89c201e1b546fa7d812a 121 Gene3D G3DSA:1.10.8.50 1 71 1.7E-29 T 12-10-2018 BAMF_0141 eef8e12edafd89c201e1b546fa7d812a 121 Gene3D G3DSA:4.10.910.10 72 121 7.2E-25 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0141 eef8e12edafd89c201e1b546fa7d812a 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0141 eef8e12edafd89c201e1b546fa7d812a 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 8.4E-34 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0141 eef8e12edafd89c201e1b546fa7d812a 121 SUPERFAMILY SSF46946 2 114 3.93E-45 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BAMF_0141 eef8e12edafd89c201e1b546fa7d812a 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.5E-52 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0141 eef8e12edafd89c201e1b546fa7d812a 121 PIRSF PIRSF002134 1 121 7.3E-42 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_2350 51b038c2bd999f925b0d3f3ac0962c25 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 223 4.5E-7 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_2350 51b038c2bd999f925b0d3f3ac0962c25 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 305 317 4.5E-7 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_2350 51b038c2bd999f925b0d3f3ac0962c25 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 274 286 4.5E-7 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_2350 51b038c2bd999f925b0d3f3ac0962c25 353 Pfam PF00557 Metallopeptidase family M24 136 337 5.8E-67 T 12-10-2018 IPR000994 Peptidase M24 BAMF_2350 51b038c2bd999f925b0d3f3ac0962c25 353 Gene3D G3DSA:3.90.230.10 128 353 3.4E-87 T 12-10-2018 BAMF_2350 51b038c2bd999f925b0d3f3ac0962c25 353 Pfam PF01321 Creatinase/Prolidase N-terminal domain 3 127 1.9E-28 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 BAMF_2350 51b038c2bd999f925b0d3f3ac0962c25 353 SUPERFAMILY SSF55920 82 348 3.93E-82 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like BAMF_2350 51b038c2bd999f925b0d3f3ac0962c25 353 Gene3D G3DSA:3.40.350.10 1 127 1.2E-36 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BAMF_1096 8045c95369d561ab8361c9326e63b8e0 359 SUPERFAMILY SSF53383 1 357 1.17E-108 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_1096 8045c95369d561ab8361c9326e63b8e0 359 Gene3D G3DSA:3.40.640.10 16 255 3.1E-85 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_1096 8045c95369d561ab8361c9326e63b8e0 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 358 47.489 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BAMF_1096 8045c95369d561ab8361c9326e63b8e0 359 Gene3D G3DSA:3.90.1150.10 256 358 1.3E-38 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1096 8045c95369d561ab8361c9326e63b8e0 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 185 204 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BAMF_1096 8045c95369d561ab8361c9326e63b8e0 359 Pfam PF00266 Aminotransferase class-V 6 347 7.6E-50 T 12-10-2018 IPR000192 Aminotransferase class V domain BAMF_1096 8045c95369d561ab8361c9326e63b8e0 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 357 2.7E-152 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BAMF_1096 8045c95369d561ab8361c9326e63b8e0 359 PIRSF PIRSF000525 1 359 4.3E-148 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BAMF_0860 4942693e830af84ad807a40eade0919c 336 SUPERFAMILY SSF52266 130 328 7.99E-39 T 12-10-2018 BAMF_0860 4942693e830af84ad807a40eade0919c 336 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 138 322 8.7E-17 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain BAMF_0860 4942693e830af84ad807a40eade0919c 336 Gene3D G3DSA:3.40.50.1110 130 334 3.9E-42 T 12-10-2018 IPR036514 SGNH hydrolase superfamily BAMF_3299 17ce3cd6f89f3235baea3d11b9ce2a70 142 Pfam PF11578 Protein of unknown function (DUF3237) 2 141 1.7E-32 T 12-10-2018 IPR020915 Uncharacterised protein family UPF0311 BAMF_3299 17ce3cd6f89f3235baea3d11b9ce2a70 142 Gene3D G3DSA:2.40.160.20 1 142 5.9E-47 T 12-10-2018 BAMF_3299 17ce3cd6f89f3235baea3d11b9ce2a70 142 Hamap MF_00775 UPF0311 protein . 1 142 20.422 T 12-10-2018 IPR020915 Uncharacterised protein family UPF0311 BAMF_3921 33f4fc71daf51c841ef2325348e77f45 116 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 100 6.0E-39 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BAMF_3921 33f4fc71daf51c841ef2325348e77f45 116 Pfam PF00825 Ribonuclease P 2 107 7.5E-34 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BAMF_3921 33f4fc71daf51c841ef2325348e77f45 116 SUPERFAMILY SSF54211 2 111 1.01E-33 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_3921 33f4fc71daf51c841ef2325348e77f45 116 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 110 20.126 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BAMF_3921 33f4fc71daf51c841ef2325348e77f45 116 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 1 110 6.3E-36 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BAMF_3921 33f4fc71daf51c841ef2325348e77f45 116 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 51 65 - T 12-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 BAMF_3921 33f4fc71daf51c841ef2325348e77f45 116 Gene3D G3DSA:3.30.230.10 1 116 2.8E-41 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 235 351 2.4E-6 T 12-10-2018 IPR000014 PAS domain BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 SUPERFAMILY SSF55785 235 339 4.19E-10 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 Pfam PF00512 His Kinase A (phospho-acceptor) domain 353 418 3.7E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 SUPERFAMILY SSF47384 338 420 1.96E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 Gene3D G3DSA:3.30.450.20 225 347 1.8E-14 T 12-10-2018 BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 Gene3D G3DSA:1.10.287.130 348 421 9.3E-27 T 12-10-2018 BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 Pfam PF16736 Single Cache-like 37 141 1.3E-11 T 12-10-2018 IPR031967 PhoR, single Cache-like domain BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 SMART SM00388 352 419 4.0E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 Gene3D G3DSA:3.30.565.10 422 576 2.0E-50 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 575 1.9E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 Pfam PF00989 PAS fold 239 343 4.7E-14 T 12-10-2018 IPR013767 PAS fold GO:0006355 BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 SUPERFAMILY SSF55874 408 575 7.86E-52 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 SMART SM00091 236 302 0.002 T 12-10-2018 IPR000014 PAS domain BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 Gene3D G3DSA:3.30.450.20 30 152 6.9E-17 T 12-10-2018 BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 530 4.9E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 516 4.9E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 574 4.9E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 555 4.9E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2713 91aed842647c489a51fbf7fffcd8a01b 579 SMART SM00387 465 577 9.5E-42 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1754 97e52e5051d2e3b34eeac72eef377173 241 SUPERFAMILY SSF46785 2 84 9.46E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1754 97e52e5051d2e3b34eeac72eef377173 241 SMART SM00866 95 233 2.6E-26 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BAMF_1754 97e52e5051d2e3b34eeac72eef377173 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 3.9E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_1754 97e52e5051d2e3b34eeac72eef377173 241 Gene3D G3DSA:3.40.1410.10 77 239 1.1E-31 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BAMF_1754 97e52e5051d2e3b34eeac72eef377173 241 Pfam PF07702 UTRA domain 96 233 1.2E-30 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BAMF_1754 97e52e5051d2e3b34eeac72eef377173 241 SMART SM00345 14 73 9.9E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_1754 97e52e5051d2e3b34eeac72eef377173 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.3E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_1754 97e52e5051d2e3b34eeac72eef377173 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.3E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_1754 97e52e5051d2e3b34eeac72eef377173 241 SUPERFAMILY SSF64288 62 239 1.3E-39 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BAMF_1754 97e52e5051d2e3b34eeac72eef377173 241 Gene3D G3DSA:1.10.10.10 2 74 4.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3484 3e25b374383dad81901674f940f5f416 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 41 59 5.8E-59 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_3484 3e25b374383dad81901674f940f5f416 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 292 318 5.8E-59 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_3484 3e25b374383dad81901674f940f5f416 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 124 143 5.8E-59 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_3484 3e25b374383dad81901674f940f5f416 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 61 84 5.8E-59 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_3484 3e25b374383dad81901674f940f5f416 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 179 199 5.8E-59 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_3484 3e25b374383dad81901674f940f5f416 333 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 2 327 1.1E-136 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_3484 3e25b374383dad81901674f940f5f416 333 SUPERFAMILY SSF53067 143 325 1.53E-49 T 12-10-2018 BAMF_3484 3e25b374383dad81901674f940f5f416 333 Gene3D G3DSA:3.90.640.10 178 251 2.9E-127 T 12-10-2018 BAMF_3484 3e25b374383dad81901674f940f5f416 333 Gene3D G3DSA:3.30.420.40 146 309 2.9E-127 T 12-10-2018 BAMF_3484 3e25b374383dad81901674f940f5f416 333 Pfam PF06723 MreB/Mbl protein 4 327 9.4E-150 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_3484 3e25b374383dad81901674f940f5f416 333 SUPERFAMILY SSF53067 3 140 2.45E-39 T 12-10-2018 BAMF_3484 3e25b374383dad81901674f940f5f416 333 Gene3D G3DSA:3.30.420.40 6 319 2.9E-127 T 12-10-2018 BAMF_0356 9b8234ade8c2e9242a3279f8c154db53 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 2.7E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_0356 9b8234ade8c2e9242a3279f8c154db53 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 2.7E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_0356 9b8234ade8c2e9242a3279f8c154db53 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 2.7E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_0356 9b8234ade8c2e9242a3279f8c154db53 104 SUPERFAMILY SSF46785 4 94 7.02E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0356 9b8234ade8c2e9242a3279f8c154db53 104 Gene3D G3DSA:1.10.10.10 4 101 6.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0356 9b8234ade8c2e9242a3279f8c154db53 104 SMART SM00418 16 94 6.0E-24 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_0356 9b8234ade8c2e9242a3279f8c154db53 104 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 1.1E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_2607 b1a28156bd33c21e9ec6a40171a11052 163 Pfam PF04093 rod shape-determining protein MreD 1 153 4.3E-39 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 BAMF_2607 b1a28156bd33c21e9ec6a40171a11052 163 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 2 150 3.0E-28 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 BAMF_2145 3f36c04a2bcb7f3f98c0b2e6d9f08427 396 SUPERFAMILY SSF81891 140 393 3.14E-50 T 12-10-2018 BAMF_2145 3f36c04a2bcb7f3f98c0b2e6d9f08427 396 Hamap MF_01263 CCA-adding enzyme [cca]. 2 394 39.336 T 12-10-2018 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 BAMF_2145 3f36c04a2bcb7f3f98c0b2e6d9f08427 396 Gene3D G3DSA:1.10.110.30 145 240 4.0E-29 T 12-10-2018 BAMF_2145 3f36c04a2bcb7f3f98c0b2e6d9f08427 396 Gene3D G3DSA:3.30.460.10 2 144 3.8E-52 T 12-10-2018 BAMF_2145 3f36c04a2bcb7f3f98c0b2e6d9f08427 396 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 169 227 7.3E-13 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BAMF_2145 3f36c04a2bcb7f3f98c0b2e6d9f08427 396 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 245 389 3.0E-32 T 12-10-2018 IPR032810 CCA-adding enzyme, C-terminal BAMF_2145 3f36c04a2bcb7f3f98c0b2e6d9f08427 396 Pfam PF01743 Poly A polymerase head domain 22 142 8.4E-39 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BAMF_2145 3f36c04a2bcb7f3f98c0b2e6d9f08427 396 Gene3D G3DSA:1.20.58.560 241 337 3.4E-10 T 12-10-2018 BAMF_2145 3f36c04a2bcb7f3f98c0b2e6d9f08427 396 SUPERFAMILY SSF81301 7 138 5.56E-41 T 12-10-2018 BAMF_2145 3f36c04a2bcb7f3f98c0b2e6d9f08427 396 Gene3D G3DSA:1.10.246.80 338 396 2.3E-17 T 12-10-2018 BAMF_2380 e412468aefec4c7c09d4da546a0a40a3 81 Pfam PF11117 Protein of unknown function (DUF2626) 1 74 2.0E-36 T 12-10-2018 IPR020254 Protein of unknown function DUF2626 BAMF_2380 e412468aefec4c7c09d4da546a0a40a3 81 ProDom PD059814 YQGY TRANSMEMBRANE MEMBRANE PRECURSOR BH2821 SIGNAL 1 79 2.0E-35 T 12-10-2018 IPR020254 Protein of unknown function DUF2626 BAMF_2629 c11a5c123d668b6f1ea98b4f91918b8e 417 SMART SM00382 108 259 3.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2629 c11a5c123d668b6f1ea98b4f91918b8e 417 SMART SM01086 311 407 9.6E-34 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BAMF_2629 c11a5c123d668b6f1ea98b4f91918b8e 417 Pfam PF06689 ClpX C4-type zinc finger 12 48 2.6E-20 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BAMF_2629 c11a5c123d668b6f1ea98b4f91918b8e 417 SUPERFAMILY SSF57716 11 46 1.71E-11 T 12-10-2018 BAMF_2629 c11a5c123d668b6f1ea98b4f91918b8e 417 SMART SM00994 10 49 8.0E-24 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BAMF_2629 c11a5c123d668b6f1ea98b4f91918b8e 417 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 389 2.6E-18 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BAMF_2629 c11a5c123d668b6f1ea98b4f91918b8e 417 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 409 53.531 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BAMF_2629 c11a5c123d668b6f1ea98b4f91918b8e 417 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 305 2.7E-51 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BAMF_2629 c11a5c123d668b6f1ea98b4f91918b8e 417 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 1 406 8.7E-217 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BAMF_2629 c11a5c123d668b6f1ea98b4f91918b8e 417 Gene3D G3DSA:1.10.8.60 310 416 2.2E-37 T 12-10-2018 BAMF_2629 c11a5c123d668b6f1ea98b4f91918b8e 417 SUPERFAMILY SSF52540 59 392 1.45E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2629 c11a5c123d668b6f1ea98b4f91918b8e 417 Gene3D G3DSA:3.30.50.30 3 50 1.0E-21 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily BAMF_2629 c11a5c123d668b6f1ea98b4f91918b8e 417 Gene3D G3DSA:3.40.50.300 53 309 2.4E-107 T 12-10-2018 BAMF_3355 2359140c863fb3e83ba9dba1f9ba50f5 957 Gene3D G3DSA:3.40.50.300 8 594 7.2E-256 T 12-10-2018 BAMF_3355 2359140c863fb3e83ba9dba1f9ba50f5 957 SUPERFAMILY SSF52540 10 569 7.25E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3355 2359140c863fb3e83ba9dba1f9ba50f5 957 SUPERFAMILY SSF52540 613 912 2.05E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3355 2359140c863fb3e83ba9dba1f9ba50f5 957 SMART SM00382 631 906 5.7E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3355 2359140c863fb3e83ba9dba1f9ba50f5 957 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3355 2359140c863fb3e83ba9dba1f9ba50f5 957 Pfam PF00005 ABC transporter 622 858 5.0E-10 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3355 2359140c863fb3e83ba9dba1f9ba50f5 957 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 922 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 BAMF_3355 2359140c863fb3e83ba9dba1f9ba50f5 957 Gene3D G3DSA:1.20.1580.10 92 492 7.2E-256 T 12-10-2018 BAMF_3355 2359140c863fb3e83ba9dba1f9ba50f5 957 Gene3D G3DSA:3.30.190.20 132 241 7.2E-256 T 12-10-2018 BAMF_3355 2359140c863fb3e83ba9dba1f9ba50f5 957 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 938 23.834 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 BAMF_3355 2359140c863fb3e83ba9dba1f9ba50f5 957 Gene3D G3DSA:1.10.8.280 286 403 7.2E-256 T 12-10-2018 BAMF_3355 2359140c863fb3e83ba9dba1f9ba50f5 957 Gene3D G3DSA:3.40.50.300 612 934 1.5E-146 T 12-10-2018 BAMF_3355 2359140c863fb3e83ba9dba1f9ba50f5 957 Gene3D G3DSA:1.20.1580.10 691 828 1.5E-146 T 12-10-2018 BAMF_3355 2359140c863fb3e83ba9dba1f9ba50f5 957 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3903 f968c82fa92aa5526333a098697f449b 195 PIRSF PIRSF000408 3 189 2.8E-81 T 12-10-2018 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA BAMF_3903 f968c82fa92aa5526333a098697f449b 195 Pfam PF12833 Helix-turn-helix domain 105 183 4.9E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BAMF_3903 f968c82fa92aa5526333a098697f449b 195 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 166 182 2.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BAMF_3903 f968c82fa92aa5526333a098697f449b 195 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 151 166 2.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BAMF_3903 f968c82fa92aa5526333a098697f449b 195 SMART SM00342 99 182 2.3E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BAMF_3903 f968c82fa92aa5526333a098697f449b 195 Gene3D G3DSA:1.10.10.60 81 132 6.9E-15 T 12-10-2018 BAMF_3903 f968c82fa92aa5526333a098697f449b 195 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 136 178 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BAMF_3903 f968c82fa92aa5526333a098697f449b 195 SUPERFAMILY SSF46689 83 133 3.76E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_3903 f968c82fa92aa5526333a098697f449b 195 Gene3D G3DSA:1.10.10.60 133 186 1.2E-15 T 12-10-2018 BAMF_3903 f968c82fa92aa5526333a098697f449b 195 Pfam PF02805 Metal binding domain of Ada 11 74 8.7E-31 T 12-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 BAMF_3903 f968c82fa92aa5526333a098697f449b 195 SUPERFAMILY SSF46689 136 184 1.16E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_3903 f968c82fa92aa5526333a098697f449b 195 Gene3D G3DSA:3.40.10.10 1 76 1.1E-31 T 12-10-2018 IPR035451 Ada-like domain superfamily BAMF_3903 f968c82fa92aa5526333a098697f449b 195 SUPERFAMILY SSF57884 7 90 1.7E-32 T 12-10-2018 IPR035451 Ada-like domain superfamily BAMF_3256 6971077534b6d5643f921807b60b819d 335 SMART SM00846 3 152 2.1E-99 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3256 6971077534b6d5643f921807b60b819d 335 PIRSF PIRSF000149 1 334 5.2E-143 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3256 6971077534b6d5643f921807b60b819d 335 SUPERFAMILY SSF55347 152 314 1.55E-74 T 12-10-2018 BAMF_3256 6971077534b6d5643f921807b60b819d 335 Gene3D G3DSA:3.40.50.720 4 329 5.2E-161 T 12-10-2018 BAMF_3256 6971077534b6d5643f921807b60b819d 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 2.8E-141 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3256 6971077534b6d5643f921807b60b819d 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3256 6971077534b6d5643f921807b60b819d 335 SUPERFAMILY SSF51735 3 168 3.21E-69 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3256 6971077534b6d5643f921807b60b819d 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.3E-40 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3256 6971077534b6d5643f921807b60b819d 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 2.0E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3256 6971077534b6d5643f921807b60b819d 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 2.0E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3256 6971077534b6d5643f921807b60b819d 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 2.0E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3256 6971077534b6d5643f921807b60b819d 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 2.0E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3256 6971077534b6d5643f921807b60b819d 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.0E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3256 6971077534b6d5643f921807b60b819d 335 Gene3D G3DSA:3.30.360.10 151 315 5.2E-161 T 12-10-2018 BAMF_3256 6971077534b6d5643f921807b60b819d 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.6E-72 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_0120 d48e274fe6a31501d4887f4975c5cd5d 92 Pfam PF00203 Ribosomal protein S19 3 83 8.4E-36 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0120 d48e274fe6a31501d4887f4975c5cd5d 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.8E-24 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0120 d48e274fe6a31501d4887f4975c5cd5d 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.8E-24 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0120 d48e274fe6a31501d4887f4975c5cd5d 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.8E-24 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0120 d48e274fe6a31501d4887f4975c5cd5d 92 Gene3D G3DSA:3.30.860.10 1 92 3.3E-40 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0120 d48e274fe6a31501d4887f4975c5cd5d 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.418 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0120 d48e274fe6a31501d4887f4975c5cd5d 92 PIRSF PIRSF002144 1 92 4.6E-32 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0120 d48e274fe6a31501d4887f4975c5cd5d 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0120 d48e274fe6a31501d4887f4975c5cd5d 92 SUPERFAMILY SSF54570 3 84 2.35E-35 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0120 d48e274fe6a31501d4887f4975c5cd5d 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 5.7E-48 T 12-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 BAMF_1160 bb22622c15b6b0a68420526ff15cdebe 301 Gene3D G3DSA:3.90.850.10 87 301 1.4E-88 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BAMF_1160 bb22622c15b6b0a68420526ff15cdebe 301 SUPERFAMILY SSF56529 80 300 7.06E-81 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BAMF_1160 bb22622c15b6b0a68420526ff15cdebe 301 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 93 300 5.4E-73 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 BAMF_3090 6393ce36d0924f132891aa0fe80cd581 161 Pfam PF05119 Phage terminase, small subunit 48 142 4.9E-23 T 12-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family BAMF_3090 6393ce36d0924f132891aa0fe80cd581 161 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 39 149 1.4E-21 T 12-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family BAMF_1464 d3246dc69b04f5db4c76df201f28853f 321 Gene3D G3DSA:3.40.50.2300 62 301 3.5E-57 T 12-10-2018 BAMF_1464 d3246dc69b04f5db4c76df201f28853f 321 SUPERFAMILY SSF47413 1 58 6.14E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_1464 d3246dc69b04f5db4c76df201f28853f 321 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 BAMF_1464 d3246dc69b04f5db4c76df201f28853f 321 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 7.1E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_1464 d3246dc69b04f5db4c76df201f28853f 321 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 7.1E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_1464 d3246dc69b04f5db4c76df201f28853f 321 Pfam PF13377 Periplasmic binding protein-like domain 165 321 1.3E-26 T 12-10-2018 BAMF_1464 d3246dc69b04f5db4c76df201f28853f 321 Gene3D G3DSA:1.10.260.40 1 58 4.0E-22 T 12-10-2018 BAMF_1464 d3246dc69b04f5db4c76df201f28853f 321 SUPERFAMILY SSF53822 61 321 2.55E-55 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BAMF_1464 d3246dc69b04f5db4c76df201f28853f 321 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.0E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_1464 d3246dc69b04f5db4c76df201f28853f 321 SMART SM00354 1 71 1.1E-32 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_1464 d3246dc69b04f5db4c76df201f28853f 321 Gene3D G3DSA:3.40.50.2300 156 283 3.5E-57 T 12-10-2018 BAMF_0351 a379f7dc1b545bfa24a46952a009ba99 316 Gene3D G3DSA:3.40.50.12250 47 299 6.4E-101 T 12-10-2018 BAMF_0351 a379f7dc1b545bfa24a46952a009ba99 316 Pfam PF01497 Periplasmic binding protein 57 290 1.1E-37 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BAMF_0351 a379f7dc1b545bfa24a46952a009ba99 316 SUPERFAMILY SSF53807 37 305 5.1E-67 T 12-10-2018 BAMF_0351 a379f7dc1b545bfa24a46952a009ba99 316 Gene3D G3DSA:3.40.50.12260 186 288 6.4E-101 T 12-10-2018 BAMF_0286 f7f0e544dad6f73676b8170889d93d7a 272 Gene3D G3DSA:3.40.50.620 1 272 6.3E-86 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_0286 f7f0e544dad6f73676b8170889d93d7a 272 Pfam PF02540 NAD synthase 23 263 1.0E-79 T 12-10-2018 IPR022310 NAD/GMP synthase BAMF_0286 f7f0e544dad6f73676b8170889d93d7a 272 SUPERFAMILY SSF52402 4 271 3.2E-83 T 12-10-2018 BAMF_0286 f7f0e544dad6f73676b8170889d93d7a 272 TIGRFAM TIGR00552 nadE: NAD+ synthetase 17 272 7.5E-86 T 12-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 BAMF_0286 f7f0e544dad6f73676b8170889d93d7a 272 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 18 266 49.559 T 12-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 BAMF_1596 0ab4bd73840994b69a1fb75c584acad7 363 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 143 9.6E-51 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_1596 0ab4bd73840994b69a1fb75c584acad7 363 Gene3D G3DSA:3.40.50.2000 164 346 1.1E-109 T 12-10-2018 BAMF_1596 0ab4bd73840994b69a1fb75c584acad7 363 SUPERFAMILY SSF53756 1 361 2.9E-108 T 12-10-2018 BAMF_1596 0ab4bd73840994b69a1fb75c584acad7 363 Gene3D G3DSA:3.40.50.2000 5 352 1.1E-109 T 12-10-2018 BAMF_1596 0ab4bd73840994b69a1fb75c584acad7 363 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 357 5.8E-112 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_1596 0ab4bd73840994b69a1fb75c584acad7 363 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 188 353 1.4E-43 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 BAMF_1596 0ab4bd73840994b69a1fb75c584acad7 363 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 362 33.686 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_2600 e92c8534ee9098f939abf170cc50e39a 94 Gene3D G3DSA:2.40.50.100 28 93 1.3E-26 T 12-10-2018 BAMF_2600 e92c8534ee9098f939abf170cc50e39a 94 SUPERFAMILY SSF110324 10 91 1.43E-32 T 12-10-2018 BAMF_2600 e92c8534ee9098f939abf170cc50e39a 94 PRINTS PR00063 Ribosomal protein L27 signature 12 36 5.1E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2600 e92c8534ee9098f939abf170cc50e39a 94 PRINTS PR00063 Ribosomal protein L27 signature 62 86 5.1E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2600 e92c8534ee9098f939abf170cc50e39a 94 PRINTS PR00063 Ribosomal protein L27 signature 37 61 5.1E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2600 e92c8534ee9098f939abf170cc50e39a 94 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 89 3.2E-41 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2600 e92c8534ee9098f939abf170cc50e39a 94 Pfam PF01016 Ribosomal L27 protein 10 89 3.6E-35 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2600 e92c8534ee9098f939abf170cc50e39a 94 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 27.333 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2600 e92c8534ee9098f939abf170cc50e39a 94 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 2.0E-17 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2600 e92c8534ee9098f939abf170cc50e39a 94 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0274 533638eff6303de298f29278f9a93e2a 67 Pfam PF03606 C4-dicarboxylate anaerobic carrier 4 60 2.5E-11 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 BAMF_1059 9ed890c426cdd192b203190e2e26f880 282 Pfam PF01522 Polysaccharide deacetylase 80 205 2.4E-28 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BAMF_1059 9ed890c426cdd192b203190e2e26f880 282 Gene3D G3DSA:3.20.20.370 44 279 3.0E-55 T 12-10-2018 BAMF_1059 9ed890c426cdd192b203190e2e26f880 282 SUPERFAMILY SSF88713 80 275 3.21E-48 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BAMF_0866 ebe8918dc2401e1d1fa21928710e4717 385 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 23 168 2.7E-20 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_0866 ebe8918dc2401e1d1fa21928710e4717 385 Pfam PF01471 Putative peptidoglycan binding domain 318 380 1.3E-18 T 12-10-2018 IPR002477 Peptidoglycan binding-like BAMF_0866 ebe8918dc2401e1d1fa21928710e4717 385 Gene3D G3DSA:1.10.101.10 312 384 3.3E-19 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BAMF_0866 ebe8918dc2401e1d1fa21928710e4717 385 Gene3D G3DSA:2.30.30.40 213 287 3.8E-8 T 12-10-2018 BAMF_0866 ebe8918dc2401e1d1fa21928710e4717 385 SUPERFAMILY SSF55846 7 185 5.1E-31 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_0866 ebe8918dc2401e1d1fa21928710e4717 385 SMART SM00644 14 187 3.3E-26 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_0866 ebe8918dc2401e1d1fa21928710e4717 385 Gene3D G3DSA:3.40.80.10 12 200 7.4E-37 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_0866 ebe8918dc2401e1d1fa21928710e4717 385 SUPERFAMILY SSF47090 312 380 3.4E-18 T 12-10-2018 IPR036365 PGBD-like superfamily BAMF_1827 cd3923961bc5a327b6f86b26ae44cd4d 242 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 11 242 2.9E-62 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 BAMF_1827 cd3923961bc5a327b6f86b26ae44cd4d 242 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 2 242 33.599 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 BAMF_1827 cd3923961bc5a327b6f86b26ae44cd4d 242 Pfam PF13847 Methyltransferase domain 56 162 1.8E-16 T 12-10-2018 IPR025714 Methyltransferase domain BAMF_1827 cd3923961bc5a327b6f86b26ae44cd4d 242 Gene3D G3DSA:3.40.50.150 18 242 4.4E-57 T 12-10-2018 BAMF_1827 cd3923961bc5a327b6f86b26ae44cd4d 242 PIRSF PIRSF006325 1 242 2.6E-70 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 BAMF_1827 cd3923961bc5a327b6f86b26ae44cd4d 242 SUPERFAMILY SSF53335 18 241 1.22E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_3277 f826c1583121cfe5331f74e06d6a75ae 215 Gene3D G3DSA:2.160.10.10 85 215 1.4E-27 T 12-10-2018 BAMF_3277 f826c1583121cfe5331f74e06d6a75ae 215 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 3 205 5.3E-61 T 12-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like BAMF_3277 f826c1583121cfe5331f74e06d6a75ae 215 Gene3D G3DSA:3.40.50.20 1 84 3.2E-13 T 12-10-2018 BAMF_3277 f826c1583121cfe5331f74e06d6a75ae 215 SUPERFAMILY SSF51161 2 208 1.52E-42 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily BAMF_3277 f826c1583121cfe5331f74e06d6a75ae 215 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 134 3.4E-4 T 12-10-2018 IPR001451 Hexapeptide repeat BAMF_3277 f826c1583121cfe5331f74e06d6a75ae 215 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 156 189 8.1E-5 T 12-10-2018 IPR001451 Hexapeptide repeat BAMF_2861 d1ee7bb494e1d6f31107aff227f28a4e 274 SUPERFAMILY SSF53474 10 273 1.04E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2861 d1ee7bb494e1d6f31107aff227f28a4e 274 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 24 272 3.1E-86 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 BAMF_2861 d1ee7bb494e1d6f31107aff227f28a4e 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 2.6E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_2861 d1ee7bb494e1d6f31107aff227f28a4e 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 2.6E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_2861 d1ee7bb494e1d6f31107aff227f28a4e 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 2.6E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_2861 d1ee7bb494e1d6f31107aff227f28a4e 274 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 14 272 36.187 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 BAMF_2861 d1ee7bb494e1d6f31107aff227f28a4e 274 Gene3D G3DSA:3.40.50.1820 11 272 6.1E-64 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2861 d1ee7bb494e1d6f31107aff227f28a4e 274 Pfam PF00561 alpha/beta hydrolase fold 26 259 2.5E-23 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_0410 6a9a7ed0dfa1d2bf200598bb26b35d39 424 Pfam PF01566 Natural resistance-associated macrophage protein 49 398 3.4E-120 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BAMF_0410 6a9a7ed0dfa1d2bf200598bb26b35d39 424 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 28 391 5.5E-131 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BAMF_0410 6a9a7ed0dfa1d2bf200598bb26b35d39 424 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 12 423 38.106 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BAMF_0410 6a9a7ed0dfa1d2bf200598bb26b35d39 424 PRINTS PR00447 Natural resistance-associated macrophage protein signature 108 134 1.9E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BAMF_0410 6a9a7ed0dfa1d2bf200598bb26b35d39 424 PRINTS PR00447 Natural resistance-associated macrophage protein signature 161 182 1.9E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BAMF_0410 6a9a7ed0dfa1d2bf200598bb26b35d39 424 PRINTS PR00447 Natural resistance-associated macrophage protein signature 211 234 1.9E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BAMF_0410 6a9a7ed0dfa1d2bf200598bb26b35d39 424 PRINTS PR00447 Natural resistance-associated macrophage protein signature 313 332 1.9E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BAMF_0410 6a9a7ed0dfa1d2bf200598bb26b35d39 424 PRINTS PR00447 Natural resistance-associated macrophage protein signature 136 155 1.9E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BAMF_2257 693fa15e4d7af334338f638c404c82c1 387 Gene3D G3DSA:1.10.150.20 313 368 3.1E-7 T 12-10-2018 BAMF_2257 693fa15e4d7af334338f638c404c82c1 387 Pfam PF13263 PHP-associated 195 237 4.8E-5 T 12-10-2018 BAMF_2257 693fa15e4d7af334338f638c404c82c1 387 TIGRFAM TIGR00375 TIGR00375: TIGR00375 family protein 27 385 5.0E-112 T 12-10-2018 IPR005287 Conserved hypothetical protein CHP00375 BAMF_2257 693fa15e4d7af334338f638c404c82c1 387 SUPERFAMILY SSF47781 310 368 1.04E-7 T 12-10-2018 IPR010994 RuvA domain 2-like BAMF_2257 693fa15e4d7af334338f638c404c82c1 387 Gene3D G3DSA:3.20.20.140 1 242 6.7E-11 T 12-10-2018 BAMF_2257 693fa15e4d7af334338f638c404c82c1 387 SUPERFAMILY SSF89550 2 242 8.44E-11 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BAMF_0702 9b8fa72621c720359a59a4f7db08160a 409 SUPERFAMILY SSF103473 12 400 1.18E-52 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0702 9b8fa72621c720359a59a4f7db08160a 409 Gene3D G3DSA:1.20.1250.20 214 403 6.7E-22 T 12-10-2018 BAMF_0702 9b8fa72621c720359a59a4f7db08160a 409 Pfam PF07690 Major Facilitator Superfamily 28 365 8.0E-27 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0702 9b8fa72621c720359a59a4f7db08160a 409 Gene3D G3DSA:1.20.1250.20 10 197 7.6E-20 T 12-10-2018 BAMF_0747 752ecfe87c14506c3762fab856463ab5 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 8 557 3.5E-266 T 12-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 BAMF_0747 752ecfe87c14506c3762fab856463ab5 561 Gene3D G3DSA:2.60.40.1180 481 561 1.3E-19 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta BAMF_0747 752ecfe87c14506c3762fab856463ab5 561 Pfam PF00128 Alpha amylase, catalytic domain 31 377 1.6E-128 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BAMF_0747 752ecfe87c14506c3762fab856463ab5 561 SUPERFAMILY SSF51445 7 475 6.22E-154 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_0747 752ecfe87c14506c3762fab856463ab5 561 SUPERFAMILY SSF51011 480 558 3.53E-18 T 12-10-2018 BAMF_0747 752ecfe87c14506c3762fab856463ab5 561 Gene3D G3DSA:3.90.400.10 108 178 5.6E-202 T 12-10-2018 BAMF_0747 752ecfe87c14506c3762fab856463ab5 561 SMART SM00642 16 419 5.1E-162 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BAMF_0747 752ecfe87c14506c3762fab856463ab5 561 Gene3D G3DSA:3.20.20.80 8 472 5.6E-202 T 12-10-2018 BAMF_0747 752ecfe87c14506c3762fab856463ab5 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 552 8.3E-14 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal BAMF_3709 41884d804df823e92732d6b8bdd89502 219 Pfam PF01256 Carbohydrate kinase 33 213 7.5E-57 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BAMF_3709 41884d804df823e92732d6b8bdd89502 219 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 19 217 9.6E-63 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 BAMF_3709 41884d804df823e92732d6b8bdd89502 219 SUPERFAMILY SSF53613 13 217 1.34E-51 T 12-10-2018 IPR029056 Ribokinase-like BAMF_3709 41884d804df823e92732d6b8bdd89502 219 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 155 165 - T 12-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site BAMF_3709 41884d804df823e92732d6b8bdd89502 219 Gene3D G3DSA:3.40.1190.20 2 219 2.3E-62 T 12-10-2018 IPR029056 Ribokinase-like BAMF_3308 9fc8b31c53983264dd1f1c3a00f680e3 198 Pfam PF00574 Clp protease 13 192 8.4E-87 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BAMF_3308 9fc8b31c53983264dd1f1c3a00f680e3 198 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.338 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BAMF_3308 9fc8b31c53983264dd1f1c3a00f680e3 198 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 7.1E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BAMF_3308 9fc8b31c53983264dd1f1c3a00f680e3 198 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 7.1E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BAMF_3308 9fc8b31c53983264dd1f1c3a00f680e3 198 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 7.1E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BAMF_3308 9fc8b31c53983264dd1f1c3a00f680e3 198 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 7.1E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BAMF_3308 9fc8b31c53983264dd1f1c3a00f680e3 198 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 7.1E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BAMF_3308 9fc8b31c53983264dd1f1c3a00f680e3 198 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 12-10-2018 IPR018215 ClpP, Ser active site BAMF_3308 9fc8b31c53983264dd1f1c3a00f680e3 198 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 12-10-2018 IPR033135 ClpP, histidine active site BAMF_3308 9fc8b31c53983264dd1f1c3a00f680e3 198 Gene3D G3DSA:3.90.226.10 1 196 1.7E-83 T 12-10-2018 BAMF_3308 9fc8b31c53983264dd1f1c3a00f680e3 198 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 2.9E-109 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BAMF_3308 9fc8b31c53983264dd1f1c3a00f680e3 198 SUPERFAMILY SSF52096 10 193 4.56E-73 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_0591 6cc2411bba59f0a6d811fa05c0d88780 168 Pfam PF12363 Phage tail assembly chaperone protein, TAC 4 113 9.2E-17 T 12-10-2018 IPR024410 Phage tail assembly chaperone protein, TAC BAMF_0591 6cc2411bba59f0a6d811fa05c0d88780 168 PIRSF PIRSF024865 1 167 2.8E-37 T 12-10-2018 IPR024410 Phage tail assembly chaperone protein, TAC BAMF_1616 ad0b3618a1f256b01c4613b077fee9a2 153 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 2 150 16.201 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BAMF_1616 ad0b3618a1f256b01c4613b077fee9a2 153 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 125 141 2.2E-17 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BAMF_1616 ad0b3618a1f256b01c4613b077fee9a2 153 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 89 104 2.2E-17 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BAMF_1616 ad0b3618a1f256b01c4613b077fee9a2 153 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 45 53 2.2E-17 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BAMF_1616 ad0b3618a1f256b01c4613b077fee9a2 153 TIGRFAM TIGR00077 lspA: signal peptidase II 2 152 7.4E-53 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BAMF_1616 ad0b3618a1f256b01c4613b077fee9a2 153 Pfam PF01252 Signal peptidase (SPase) II 6 145 2.2E-37 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BAMF_3544 1365da38ab99dd43f9381595b4f6c7c4 66 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.6E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_3544 1365da38ab99dd43f9381595b4f6c7c4 66 PRINTS PR01249 Ribosomal protein L31 signature 30 45 3.6E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_3544 1365da38ab99dd43f9381595b4f6c7c4 66 PRINTS PR01249 Ribosomal protein L31 signature 45 63 3.6E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_3544 1365da38ab99dd43f9381595b4f6c7c4 66 Gene3D G3DSA:2.30.170.50 1 66 5.0E-32 T 12-10-2018 BAMF_3544 1365da38ab99dd43f9381595b4f6c7c4 66 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_3544 1365da38ab99dd43f9381595b4f6c7c4 66 SUPERFAMILY SSF143800 1 65 1.96E-25 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3544 1365da38ab99dd43f9381595b4f6c7c4 66 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 4.4E-31 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_3544 1365da38ab99dd43f9381595b4f6c7c4 66 Pfam PF01197 Ribosomal protein L31 1 64 1.7E-31 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_3544 1365da38ab99dd43f9381595b4f6c7c4 66 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 66 28.649 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_3161 dc0a3930707fa5bef7795769ca5cb05b 292 Gene3D G3DSA:2.120.10.30 2 290 3.3E-98 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BAMF_3161 dc0a3930707fa5bef7795769ca5cb05b 292 SUPERFAMILY SSF63829 8 287 1.5E-61 T 12-10-2018 BAMF_3161 dc0a3930707fa5bef7795769ca5cb05b 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 237 255 1.1E-47 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BAMF_3161 dc0a3930707fa5bef7795769ca5cb05b 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 194 211 1.1E-47 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BAMF_3161 dc0a3930707fa5bef7795769ca5cb05b 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 154 174 1.1E-47 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BAMF_3161 dc0a3930707fa5bef7795769ca5cb05b 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 14 31 1.1E-47 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BAMF_3161 dc0a3930707fa5bef7795769ca5cb05b 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 90 111 1.1E-47 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BAMF_3161 dc0a3930707fa5bef7795769ca5cb05b 292 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 131 153 1.1E-47 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) BAMF_3161 dc0a3930707fa5bef7795769ca5cb05b 292 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 14 256 2.2E-79 T 12-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region BAMF_2457 61962c81d1773e7b15e76a987f1d0593 204 SUPERFAMILY SSF47781 126 203 1.33E-29 T 12-10-2018 IPR010994 RuvA domain 2-like BAMF_2457 61962c81d1773e7b15e76a987f1d0593 204 Gene3D G3DSA:1.10.150.310 151 204 1.3E-16 T 12-10-2018 BAMF_2457 61962c81d1773e7b15e76a987f1d0593 204 Gene3D G3DSA:3.10.560.10 55 150 3.2E-10 T 12-10-2018 BAMF_2457 61962c81d1773e7b15e76a987f1d0593 204 Pfam PF10531 SLBB domain 67 122 5.0E-14 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_2457 61962c81d1773e7b15e76a987f1d0593 204 SMART SM00278 181 200 1.2 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BAMF_2457 61962c81d1773e7b15e76a987f1d0593 204 SMART SM00278 151 170 0.0055 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BAMF_2457 61962c81d1773e7b15e76a987f1d0593 204 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 139 203 4.2E-30 T 12-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain BAMF_2457 61962c81d1773e7b15e76a987f1d0593 204 Pfam PF12836 Helix-hairpin-helix motif 141 202 9.8E-24 T 12-10-2018 BAMF_3340 2d060f560a36bcdb00cdddb9c9390560 241 Pfam PF13529 Peptidase_C39 like family 53 213 4.2E-43 T 12-10-2018 IPR039564 Peptidase C39-like BAMF_3340 2d060f560a36bcdb00cdddb9c9390560 241 SUPERFAMILY SSF54001 128 210 5.12E-5 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BAMF_3340 2d060f560a36bcdb00cdddb9c9390560 241 Gene3D G3DSA:3.90.70.10 50 241 6.9E-67 T 12-10-2018 BAMF_3340 2d060f560a36bcdb00cdddb9c9390560 241 PIRSF PIRSF032442 1 241 1.9E-74 T 12-10-2018 IPR016997 Uncharacterised conserved protein UCP032442 BAMF_1795 6e2fc73eeb51224890a675102325cb8d 442 Gene3D G3DSA:3.40.50.200 118 441 1.3E-103 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BAMF_1795 6e2fc73eeb51224890a675102325cb8d 442 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 151 161 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BAMF_1795 6e2fc73eeb51224890a675102325cb8d 442 SUPERFAMILY SSF52743 143 439 2.75E-85 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BAMF_1795 6e2fc73eeb51224890a675102325cb8d 442 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 187 197 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BAMF_1795 6e2fc73eeb51224890a675102325cb8d 442 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 382 392 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BAMF_1795 6e2fc73eeb51224890a675102325cb8d 442 Pfam PF00082 Subtilase family 146 431 3.5E-57 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BAMF_1795 6e2fc73eeb51224890a675102325cb8d 442 PRINTS PR00723 Subtilisin serine protease family (S8) signature 146 165 6.7E-19 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_1795 6e2fc73eeb51224890a675102325cb8d 442 PRINTS PR00723 Subtilisin serine protease family (S8) signature 183 196 6.7E-19 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_1795 6e2fc73eeb51224890a675102325cb8d 442 PRINTS PR00723 Subtilisin serine protease family (S8) signature 381 397 6.7E-19 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_1154 fdaefd962bc9450f6765523208464e4e 131 ProDom PD031981 GERMINATION SPORE GERPE PE PROBABLE SPORULATION 5 120 4.0E-42 T 12-10-2018 IPR024496 Spore germination protein GerPE BAMF_1154 fdaefd962bc9450f6765523208464e4e 131 Pfam PF10970 Spore germination protein GerPE 5 126 1.8E-44 T 12-10-2018 IPR024496 Spore germination protein GerPE BAMF_2628 92b8526c69d1ae1e4656995fda21cfb2 552 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 343 534 4.2E-33 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 BAMF_2628 92b8526c69d1ae1e4656995fda21cfb2 552 SUPERFAMILY SSF54211 350 532 1.52E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_2628 92b8526c69d1ae1e4656995fda21cfb2 552 SMART SM00382 89 267 4.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2628 92b8526c69d1ae1e4656995fda21cfb2 552 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 368 3.2E-32 T 12-10-2018 BAMF_2628 92b8526c69d1ae1e4656995fda21cfb2 552 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 439 458 3.2E-32 T 12-10-2018 BAMF_2628 92b8526c69d1ae1e4656995fda21cfb2 552 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 97 116 3.2E-32 T 12-10-2018 BAMF_2628 92b8526c69d1ae1e4656995fda21cfb2 552 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 469 488 3.2E-32 T 12-10-2018 BAMF_2628 92b8526c69d1ae1e4656995fda21cfb2 552 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 510 3.2E-32 T 12-10-2018 BAMF_2628 92b8526c69d1ae1e4656995fda21cfb2 552 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 5 533 2.3E-291 T 12-10-2018 IPR014251 Sporulation protease LonB BAMF_2628 92b8526c69d1ae1e4656995fda21cfb2 552 SUPERFAMILY SSF52540 56 328 1.7E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2628 92b8526c69d1ae1e4656995fda21cfb2 552 Gene3D G3DSA:3.30.230.10 344 550 1.2E-51 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BAMF_2628 92b8526c69d1ae1e4656995fda21cfb2 552 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 93 266 5.5E-19 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BAMF_2628 92b8526c69d1ae1e4656995fda21cfb2 552 Gene3D G3DSA:3.40.50.300 53 263 2.1E-33 T 12-10-2018 BAMF_2628 92b8526c69d1ae1e4656995fda21cfb2 552 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 442 450 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 SUPERFAMILY SSF47384 512 579 7.85E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 Pfam PF13426 PAS domain 164 261 0.0057 T 12-10-2018 IPR000014 PAS domain BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 625 728 1.0E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 SUPERFAMILY SSF55785 259 371 1.01E-16 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 SMART SM00388 517 581 8.6E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 Gene3D G3DSA:3.30.450.20 380 500 2.5E-13 T 12-10-2018 BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 SMART SM00091 274 342 7.5E-8 T 12-10-2018 IPR000014 PAS domain BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 SMART SM00091 32 98 3.9E-5 T 12-10-2018 IPR000014 PAS domain BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 SMART SM00091 394 462 0.05 T 12-10-2018 IPR000014 PAS domain BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 SMART SM00091 153 219 0.025 T 12-10-2018 IPR000014 PAS domain BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 Gene3D G3DSA:1.10.287.130 502 580 4.3E-16 T 12-10-2018 BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 Gene3D G3DSA:3.30.565.10 583 738 1.5E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 Pfam PF13188 PAS domain 395 447 3.9E-4 T 12-10-2018 IPR000014 PAS domain BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 SUPERFAMILY SSF55785 20 139 2.58E-13 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 Pfam PF00989 PAS fold 274 371 1.9E-8 T 12-10-2018 IPR013767 PAS fold GO:0006355 BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 708 4.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 675 4.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 714 727 4.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 689 4.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 Pfam PF00512 His Kinase A (phospho-acceptor) domain 519 579 5.0E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 SUPERFAMILY SSF55874 576 729 6.29E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 SUPERFAMILY SSF55785 138 260 3.14E-13 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 Pfam PF08448 PAS fold 40 139 3.8E-6 T 12-10-2018 IPR013656 PAS fold-4 BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 SUPERFAMILY SSF55785 379 451 1.77E-13 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 Gene3D G3DSA:3.30.450.20 149 273 1.7E-14 T 12-10-2018 BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 SMART SM00387 623 730 2.3E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 272 389 3.1E-12 T 12-10-2018 IPR000014 PAS domain BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 390 509 2.5E-8 T 12-10-2018 IPR000014 PAS domain BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 31 147 1.3E-7 T 12-10-2018 IPR000014 PAS domain BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 269 2.9E-9 T 12-10-2018 IPR000014 PAS domain BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 Gene3D G3DSA:3.30.450.20 274 379 2.7E-17 T 12-10-2018 BAMF_1435 3f70dbb147b2a54f6397ec4b2645ecc9 739 Gene3D G3DSA:3.30.450.20 31 140 9.5E-15 T 12-10-2018 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 SUPERFAMILY SSF52777 9 183 1.1E-36 T 12-10-2018 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Gene3D G3DSA:3.30.559.10 1046 1418 4.7E-150 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Gene3D G3DSA:3.40.50.1820 2029 2370 8.6E-117 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Pfam PF13193 AMP-binding enzyme C-terminal domain 1937 2012 1.7E-14 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Pfam PF13193 AMP-binding enzyme C-terminal domain 863 936 2.7E-9 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 SUPERFAMILY SSF47336 2031 2102 1.57E-20 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Gene3D G3DSA:3.40.50.12780 446 847 1.4E-140 T 12-10-2018 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 SUPERFAMILY SSF52777 1047 1219 2.67E-48 T 12-10-2018 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Gene3D G3DSA:3.30.300.30 850 950 1.1E-32 T 12-10-2018 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1664 1675 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Pfam PF00975 Thioesterase domain 2125 2259 4.2E-31 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 SUPERFAMILY SSF52777 1232 1482 2.45E-58 T 12-10-2018 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Gene3D G3DSA:1.10.1200.10 951 1033 5.5E-26 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1535 1953 2.2E-138 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 478 879 7.4E-133 T 12-10-2018 IPR010071 Amino acid adenylation domain BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 SUPERFAMILY SSF47336 956 1026 1.09E-18 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Gene3D G3DSA:3.30.559.30 206 426 2.6E-64 T 12-10-2018 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Gene3D G3DSA:3.30.559.30 1228 1480 4.7E-150 T 12-10-2018 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Pfam PF00501 AMP-binding enzyme 457 855 1.3E-106 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Pfam PF00501 AMP-binding enzyme 1514 1929 5.9E-104 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 SUPERFAMILY SSF56801 1473 2050 1.28E-167 T 12-10-2018 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Pfam PF00550 Phosphopantetheine attachment site 2040 2102 7.7E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Pfam PF00550 Phosphopantetheine attachment site 964 1025 1.7E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 ProSitePatterns PS00455 Putative AMP-binding domain signature. 603 614 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 SUPERFAMILY SSF52777 192 443 3.89E-36 T 12-10-2018 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Gene3D G3DSA:3.40.50.12780 1499 1923 4.3E-145 T 12-10-2018 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Gene3D G3DSA:3.30.300.30 1924 2028 5.0E-38 T 12-10-2018 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 SMART SM00823 Phosphopantetheine attachment site 961 1030 4.9E-4 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 SMART SM00823 Phosphopantetheine attachment site 2037 2106 5.6E-8 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Gene3D G3DSA:3.30.559.10 9 205 1.7E-60 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 SUPERFAMILY SSF56801 419 974 5.49E-160 T 12-10-2018 BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 SUPERFAMILY SSF53474 2105 2368 2.51E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Pfam PF00668 Condensation domain 1043 1495 2.5E-98 T 12-10-2018 IPR001242 Condensation domain BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 Pfam PF00668 Condensation domain 5 434 1.1E-65 T 12-10-2018 IPR001242 Condensation domain BAMF_2992 d84edf9c072ca16476d9c2d2c1fae7de 2375 SMART SM00824 Thioesterase 2127 2364 5.5E-5 T 12-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 BAMF_1771 6f800c41fb7902e4854fa4992d276328 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BAMF_1771 6f800c41fb7902e4854fa4992d276328 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 343 54.343 T 12-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 BAMF_1771 6f800c41fb7902e4854fa4992d276328 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 342 7.5E-173 T 12-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 BAMF_1771 6f800c41fb7902e4854fa4992d276328 343 Gene3D G3DSA:3.90.180.10 17 334 6.2E-117 T 12-10-2018 BAMF_1771 6f800c41fb7902e4854fa4992d276328 343 Gene3D G3DSA:3.40.50.720 153 288 6.2E-117 T 12-10-2018 BAMF_1771 6f800c41fb7902e4854fa4992d276328 343 SMART SM00829 12 341 3.4E-7 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BAMF_1771 6f800c41fb7902e4854fa4992d276328 343 Pfam PF00107 Zinc-binding dehydrogenase 175 303 1.7E-29 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BAMF_1771 6f800c41fb7902e4854fa4992d276328 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 3.2E-34 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BAMF_1771 6f800c41fb7902e4854fa4992d276328 343 SUPERFAMILY SSF50129 1 174 4.26E-52 T 12-10-2018 IPR011032 GroES-like superfamily BAMF_1771 6f800c41fb7902e4854fa4992d276328 343 SUPERFAMILY SSF51735 142 301 2.76E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2738 a316bc5aa8979d5094061ce06b049d6d 170 Pfam PF00994 Probable molybdopterin binding domain 18 161 3.5E-35 T 12-10-2018 IPR001453 MoaB/Mog domain BAMF_2738 a316bc5aa8979d5094061ce06b049d6d 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 14 157 1.6E-37 T 12-10-2018 IPR001453 MoaB/Mog domain BAMF_2738 a316bc5aa8979d5094061ce06b049d6d 170 Gene3D G3DSA:3.40.980.10 1 169 4.5E-50 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily BAMF_2738 a316bc5aa8979d5094061ce06b049d6d 170 SUPERFAMILY SSF53218 8 167 7.2E-42 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily BAMF_2738 a316bc5aa8979d5094061ce06b049d6d 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 75 88 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 BAMF_2738 a316bc5aa8979d5094061ce06b049d6d 170 PIRSF PIRSF006443 1 170 4.6E-67 T 12-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 BAMF_2738 a316bc5aa8979d5094061ce06b049d6d 170 SMART SM00852 17 162 4.1E-26 T 12-10-2018 IPR001453 MoaB/Mog domain BAMF_1924 80ba266761560c05602561f80b1a5046 256 Hamap MF_00668 6-carboxyhexanoate--CoA ligase [bioW]. 6 251 56.556 T 12-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 BAMF_1924 80ba266761560c05602561f80b1a5046 256 Pfam PF03744 6-carboxyhexanoate--CoA ligase 7 250 1.7E-85 T 12-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 BAMF_1924 80ba266761560c05602561f80b1a5046 256 TIGRFAM TIGR01204 bioW: 6-carboxyhexanoate--CoA ligase 20 251 2.6E-92 T 12-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 BAMF_1924 80ba266761560c05602561f80b1a5046 256 ProDom PD017229 LIGASE SYNTHASE BIOTIN MAGNESIUM PIMELOYL-COA 6-CARBOXYHEXANOATE--COA BIOSYNTHESIS 6-CARBOXYHEXANOATE-COA BIOW COA 7 224 2.0E-115 T 12-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 526 4.0E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 SUPERFAMILY SSF55890 323 407 1.44E-16 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 322 377 2.3E-13 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 Gene3D G3DSA:3.30.450.20 31 170 1.2E-43 T 12-10-2018 BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 SUPERFAMILY SSF55874 393 526 1.11E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 Gene3D G3DSA:3.30.450.20 199 313 1.2E-21 T 12-10-2018 BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 Pfam PF17203 Single cache domain 3 36 170 1.1E-25 T 12-10-2018 IPR033463 Single cache domain 3 BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 Pfam PF00989 PAS fold 212 312 4.7E-5 T 12-10-2018 IPR013767 PAS fold GO:0006355 BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 SMART SM00091 212 280 0.001 T 12-10-2018 IPR000014 PAS domain BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 SUPERFAMILY SSF103190 36 169 2.31E-36 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 SMART SM00387 419 527 3.6E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 3.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 486 3.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 3.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 3.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 Gene3D G3DSA:1.10.287.130 314 379 3.5E-7 T 12-10-2018 BAMF_2952 14e3cfe8682cf37948a3a8c495222192 533 Gene3D G3DSA:3.30.565.10 384 532 3.1E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3421 5d3117d0b6abc75b5b00a87317043263 459 Gene3D G3DSA:3.90.550.10 1 224 3.5E-55 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3421 5d3117d0b6abc75b5b00a87317043263 459 SUPERFAMILY SSF53335 243 425 2.5E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_3421 5d3117d0b6abc75b5b00a87317043263 459 Gene3D G3DSA:3.40.50.150 249 459 2.2E-46 T 12-10-2018 BAMF_3421 5d3117d0b6abc75b5b00a87317043263 459 Pfam PF13489 Methyltransferase domain 249 402 9.9E-19 T 12-10-2018 BAMF_3421 5d3117d0b6abc75b5b00a87317043263 459 SUPERFAMILY SSF53448 2 244 5.72E-56 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3421 5d3117d0b6abc75b5b00a87317043263 459 Pfam PF00535 Glycosyl transferase family 2 4 133 3.1E-26 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BAMF_0643 c31bb3ad9839d26f9023adec8a8e41f3 476 PIRSF PIRSF000485 8 473 2.6E-190 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BAMF_0643 c31bb3ad9839d26f9023adec8a8e41f3 476 Pfam PF00156 Phosphoribosyl transferase domain 281 382 3.2E-7 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BAMF_0643 c31bb3ad9839d26f9023adec8a8e41f3 476 SUPERFAMILY SSF56235 12 237 7.29E-70 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BAMF_0643 c31bb3ad9839d26f9023adec8a8e41f3 476 Pfam PF13522 Glutamine amidotransferase domain 69 205 1.7E-21 T 12-10-2018 BAMF_0643 c31bb3ad9839d26f9023adec8a8e41f3 476 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 456 47.277 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BAMF_0643 c31bb3ad9839d26f9023adec8a8e41f3 476 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 457 8.0E-174 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BAMF_0643 c31bb3ad9839d26f9023adec8a8e41f3 476 Gene3D G3DSA:3.40.50.2020 271 435 3.8E-177 T 12-10-2018 BAMF_0643 c31bb3ad9839d26f9023adec8a8e41f3 476 Gene3D G3DSA:3.60.20.10 12 458 3.8E-177 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BAMF_0643 c31bb3ad9839d26f9023adec8a8e41f3 476 SUPERFAMILY SSF53271 247 469 8.39E-76 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BAMF_3835 75262e8a0c93ef20ee2d2115ad34bcf1 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 159 7.6E-79 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BAMF_3835 75262e8a0c93ef20ee2d2115ad34bcf1 159 PIRSF PIRSF004505 1 159 2.4E-54 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BAMF_3835 75262e8a0c93ef20ee2d2115ad34bcf1 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 30.804 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BAMF_3835 75262e8a0c93ef20ee2d2115ad34bcf1 159 Pfam PF02590 Predicted SPOUT methyltransferase 2 158 9.8E-60 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BAMF_3835 75262e8a0c93ef20ee2d2115ad34bcf1 159 SUPERFAMILY SSF75217 2 157 1.36E-63 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases BAMF_3835 75262e8a0c93ef20ee2d2115ad34bcf1 159 Gene3D G3DSA:3.40.1280.10 1 159 5.0E-70 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BAMF_2354 ab455dbd3b57dfede27a593dae859b08 291 Gene3D G3DSA:3.40.1090.20 4 107 1.4E-22 T 12-10-2018 BAMF_2354 ab455dbd3b57dfede27a593dae859b08 291 SUPERFAMILY SSF52151 6 288 1.96E-42 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BAMF_2354 ab455dbd3b57dfede27a593dae859b08 291 Gene3D G3DSA:3.40.1090.10 108 289 7.7E-20 T 12-10-2018 BAMF_2354 ab455dbd3b57dfede27a593dae859b08 291 Pfam PF01734 Patatin-like phospholipase 6 195 9.7E-30 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 Gene3D G3DSA:1.20.1270.10 477 579 3.8E-25 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.1E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 PRINTS PR00301 70kDa heat shock protein signature 304 320 2.1E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 PRINTS PR00301 70kDa heat shock protein signature 439 455 2.1E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 PRINTS PR00301 70kDa heat shock protein signature 358 377 2.1E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.1E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 PRINTS PR00301 70kDa heat shock protein signature 112 132 2.1E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 PRINTS PR00301 70kDa heat shock protein signature 335 355 2.1E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 PRINTS PR00301 70kDa heat shock protein signature 53 61 2.1E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 PRINTS PR00301 70kDa heat shock protein signature 172 182 2.1E-79 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 Gene3D G3DSA:3.30.420.40 5 347 1.1E-151 T 12-10-2018 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 Pfam PF00012 Hsp70 protein 76 573 3.4E-222 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 Gene3D G3DSA:3.90.640.10 198 279 1.1E-151 T 12-10-2018 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 SUPERFAMILY SSF100920 354 510 5.49E-62 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 9.2E-286 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 Gene3D G3DSA:2.60.34.10 348 476 1.4E-58 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 SUPERFAMILY SSF53067 2 157 9.5E-58 T 12-10-2018 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 SUPERFAMILY SSF100934 477 575 8.37E-13 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 SUPERFAMILY SSF53067 160 351 2.3E-67 T 12-10-2018 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 Gene3D G3DSA:3.30.420.40 159 337 1.1E-151 T 12-10-2018 BAMF_2444 38e05f6c53fb13a499cbea3d8702309b 612 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 605 37.123 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 BAMF_1390 9bccb40bbd3573a6d1bcb7fefbd29978 286 Gene3D G3DSA:3.75.10.10 8 286 3.5E-79 T 12-10-2018 BAMF_1390 9bccb40bbd3573a6d1bcb7fefbd29978 286 SUPERFAMILY SSF55909 11 285 4.46E-76 T 12-10-2018 BAMF_1390 9bccb40bbd3573a6d1bcb7fefbd29978 286 Pfam PF02274 Amidinotransferase 26 284 6.1E-47 T 12-10-2018 BAMF_0664 1a4dcd9a7208ae28cfbd33c3d429bab0 476 Gene3D G3DSA:1.10.10.410 413 476 8.1E-24 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal BAMF_0664 1a4dcd9a7208ae28cfbd33c3d429bab0 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 473 2.8E-182 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 BAMF_0664 1a4dcd9a7208ae28cfbd33c3d429bab0 476 Pfam PF02934 GatB/GatE catalytic domain 5 286 2.1E-112 T 12-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 BAMF_0664 1a4dcd9a7208ae28cfbd33c3d429bab0 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 142 156 - T 12-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 BAMF_0664 1a4dcd9a7208ae28cfbd33c3d429bab0 476 SUPERFAMILY SSF89095 295 400 6.93E-37 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 BAMF_0664 1a4dcd9a7208ae28cfbd33c3d429bab0 476 Gene3D G3DSA:1.10.150.380 298 411 5.7E-40 T 12-10-2018 BAMF_0664 1a4dcd9a7208ae28cfbd33c3d429bab0 476 SUPERFAMILY SSF55931 4 294 4.97E-122 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BAMF_0664 1a4dcd9a7208ae28cfbd33c3d429bab0 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 474 39.26 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 BAMF_0664 1a4dcd9a7208ae28cfbd33c3d429bab0 476 SMART SM00845 326 473 6.2E-76 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 BAMF_0664 1a4dcd9a7208ae28cfbd33c3d429bab0 476 Pfam PF02637 GatB domain 326 473 9.4E-55 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 BAMF_2748 02c859db9a069fb550d787ad7ec17642 560 Pfam PF00501 AMP-binding enzyme 56 454 1.3E-84 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_2748 02c859db9a069fb550d787ad7ec17642 560 Gene3D G3DSA:3.40.50.12780 28 447 6.8E-114 T 12-10-2018 BAMF_2748 02c859db9a069fb550d787ad7ec17642 560 ProSitePatterns PS00455 Putative AMP-binding domain signature. 206 217 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_2748 02c859db9a069fb550d787ad7ec17642 560 SUPERFAMILY SSF56801 55 552 1.83E-141 T 12-10-2018 BAMF_2748 02c859db9a069fb550d787ad7ec17642 560 Pfam PF13193 AMP-binding enzyme C-terminal domain 463 541 2.4E-23 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_2748 02c859db9a069fb550d787ad7ec17642 560 Gene3D G3DSA:3.30.300.310 450 556 2.5E-28 T 12-10-2018 BAMF_1193 becaab2626e0406af4c6d7aa5eeee5cb 405 Pfam PF01960 ArgJ family 23 405 4.8E-146 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 BAMF_1193 becaab2626e0406af4c6d7aa5eeee5cb 405 Gene3D G3DSA:3.60.70.12 4 191 3.0E-65 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 BAMF_1193 becaab2626e0406af4c6d7aa5eeee5cb 405 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 11 405 3.1E-172 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 BAMF_1193 becaab2626e0406af4c6d7aa5eeee5cb 405 SUPERFAMILY SSF56266 18 401 1.7E-133 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 BAMF_1193 becaab2626e0406af4c6d7aa5eeee5cb 405 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 405 141.102 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 BAMF_1193 becaab2626e0406af4c6d7aa5eeee5cb 405 Gene3D G3DSA:3.10.20.340 277 405 6.1E-46 T 12-10-2018 BAMF_1193 becaab2626e0406af4c6d7aa5eeee5cb 405 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 34 405 4.0E-180 T 12-10-2018 BAMF_1193 becaab2626e0406af4c6d7aa5eeee5cb 405 Gene3D G3DSA:3.30.2330.10 192 276 4.2E-33 T 12-10-2018 BAMF_0124 cb5cc3a5fc0650741768f0402dc689c4 66 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.203 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0124 cb5cc3a5fc0650741768f0402dc689c4 66 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 5.7E-25 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0124 cb5cc3a5fc0650741768f0402dc689c4 66 Pfam PF00831 Ribosomal L29 protein 4 60 1.3E-26 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0124 cb5cc3a5fc0650741768f0402dc689c4 66 Gene3D G3DSA:1.10.287.310 1 66 3.9E-31 T 12-10-2018 BAMF_0124 cb5cc3a5fc0650741768f0402dc689c4 66 SUPERFAMILY SSF46561 1 63 4.84E-24 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0124 cb5cc3a5fc0650741768f0402dc689c4 66 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 12-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_3852 cb575531a082797dda257c898aca8d29 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 223 4.2E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_3852 cb575531a082797dda257c898aca8d29 227 SMART SM00448 7 117 6.6E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3852 cb575531a082797dda257c898aca8d29 227 Gene3D G3DSA:3.40.50.2300 2 127 1.1E-35 T 12-10-2018 BAMF_3852 cb575531a082797dda257c898aca8d29 227 SUPERFAMILY SSF52172 5 182 1.08E-40 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_3852 cb575531a082797dda257c898aca8d29 227 Pfam PF00072 Response regulator receiver domain 9 117 1.2E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3852 cb575531a082797dda257c898aca8d29 227 SMART SM00862 150 224 1.3E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_3852 cb575531a082797dda257c898aca8d29 227 Gene3D G3DSA:1.10.10.10 129 227 5.4E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2993 7a86b477b0211bfc171c9d549f848c46 306 Pfam PF00857 Isochorismatase family 32 202 1.0E-40 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 BAMF_2993 7a86b477b0211bfc171c9d549f848c46 306 SUPERFAMILY SSF47336 224 295 3.01E-9 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_2993 7a86b477b0211bfc171c9d549f848c46 306 Pfam PF00550 Phosphopantetheine attachment site 228 288 1.4E-6 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_2993 7a86b477b0211bfc171c9d549f848c46 306 Gene3D G3DSA:1.10.1200.10 221 296 1.9E-28 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_2993 7a86b477b0211bfc171c9d549f848c46 306 SUPERFAMILY SSF52499 2 217 4.45E-62 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BAMF_2993 7a86b477b0211bfc171c9d549f848c46 306 PRINTS PR01398 Isochorismatase signature 168 186 4.2E-48 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BAMF_2993 7a86b477b0211bfc171c9d549f848c46 306 PRINTS PR01398 Isochorismatase signature 63 80 4.2E-48 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BAMF_2993 7a86b477b0211bfc171c9d549f848c46 306 PRINTS PR01398 Isochorismatase signature 2 14 4.2E-48 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BAMF_2993 7a86b477b0211bfc171c9d549f848c46 306 PRINTS PR01398 Isochorismatase signature 80 99 4.2E-48 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BAMF_2993 7a86b477b0211bfc171c9d549f848c46 306 PRINTS PR01398 Isochorismatase signature 112 134 4.2E-48 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BAMF_2993 7a86b477b0211bfc171c9d549f848c46 306 PRINTS PR01398 Isochorismatase signature 186 203 4.2E-48 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BAMF_2993 7a86b477b0211bfc171c9d549f848c46 306 PIRSF PIRSF001111 1 300 7.8E-133 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BAMF_2993 7a86b477b0211bfc171c9d549f848c46 306 Gene3D G3DSA:3.40.50.850 1 207 3.4E-75 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 Pfam PF00682 HMGL-like 534 806 5.9E-25 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 Pfam PF00364 Biotin-requiring enzyme 1079 1145 6.3E-17 T 12-10-2018 IPR000089 Biotin/lipoyl attachment BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 Gene3D G3DSA:1.10.10.2790 944 979 1.3E-287 T 12-10-2018 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 Gene3D G3DSA:3.10.600.10 510 1061 1.3E-287 T 12-10-2018 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 326 3.0E-79 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 Pfam PF00289 Biotin carboxylase, N-terminal domain 6 114 2.0E-43 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 SMART SM00878 346 453 9.0E-50 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 SUPERFAMILY SSF51230 1071 1146 7.98E-21 T 12-10-2018 IPR011053 Single hybrid motif BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 SUPERFAMILY SSF51246 341 460 1.41E-37 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 Pfam PF02436 Conserved carboxylase domain 829 1029 2.2E-77 T 12-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 Gene3D G3DSA:3.10.600.10 464 504 2.2E-7 T 12-10-2018 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 8 1146 0.0 T 12-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 SUPERFAMILY SSF89000 834 1011 4.71E-58 T 12-10-2018 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 PIRSF PIRSF001594 1 1147 0.0 T 12-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 Gene3D G3DSA:2.40.50.100 1069 1148 1.4E-24 T 12-10-2018 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 SUPERFAMILY SSF52440 5 117 3.24E-45 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 SUPERFAMILY SSF51569 526 837 9.89E-81 T 12-10-2018 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 Pfam PF02785 Biotin carboxylase C-terminal domain 346 453 1.2E-31 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 SUPERFAMILY SSF56059 88 335 9.02E-72 T 12-10-2018 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 Gene3D G3DSA:3.30.470.130 1 461 1.5E-197 T 12-10-2018 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 Gene3D G3DSA:1.10.472.90 819 943 1.3E-287 T 12-10-2018 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 Gene3D G3DSA:3.20.20.70 514 818 1.3E-287 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_1560 68e4a55c3d3a736a23ef7ca85cb45a0b 1148 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_3807 02d949d8547b6ea8e24038d61238e6eb 410 SUPERFAMILY SSF63829 121 374 1.31E-19 T 12-10-2018 BAMF_3807 02d949d8547b6ea8e24038d61238e6eb 410 Gene3D G3DSA:2.120.10.30 58 400 2.1E-85 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BAMF_3807 02d949d8547b6ea8e24038d61238e6eb 410 Pfam PF03022 Major royal jelly protein 122 380 6.6E-32 T 12-10-2018 IPR017996 Major royal jelly protein/protein yellow BAMF_3807 02d949d8547b6ea8e24038d61238e6eb 410 PRINTS PR01366 Major royal jelly protein family signature 152 176 7.3E-8 T 12-10-2018 IPR017996 Major royal jelly protein/protein yellow BAMF_3807 02d949d8547b6ea8e24038d61238e6eb 410 PRINTS PR01366 Major royal jelly protein family signature 78 99 7.3E-8 T 12-10-2018 IPR017996 Major royal jelly protein/protein yellow BAMF_3807 02d949d8547b6ea8e24038d61238e6eb 410 PRINTS PR01366 Major royal jelly protein family signature 32 53 7.3E-8 T 12-10-2018 IPR017996 Major royal jelly protein/protein yellow BAMF_0546 e0be02dbe4d55d3a1634e1af7a2c20a5 190 Pfam PF01381 Helix-turn-helix 16 63 8.9E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_0546 e0be02dbe4d55d3a1634e1af7a2c20a5 190 Gene3D G3DSA:1.10.260.40 6 77 1.5E-6 T 12-10-2018 BAMF_0546 e0be02dbe4d55d3a1634e1af7a2c20a5 190 SUPERFAMILY SSF47413 9 63 1.49E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_2497 471f96803865c499c821a0efe2590969 147 Pfam PF13411 MerR HTH family regulatory protein 3 69 3.2E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_2497 471f96803865c499c821a0efe2590969 147 SUPERFAMILY SSF46955 3 116 1.25E-26 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BAMF_2497 471f96803865c499c821a0efe2590969 147 Gene3D G3DSA:1.10.1660.10 2 138 4.3E-28 T 12-10-2018 BAMF_2497 471f96803865c499c821a0efe2590969 147 SMART SM00422 2 71 1.5E-14 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_3812 974af655af17184d4391a64b56a6818e 988 Pfam PF01526 Tn3 transposase DDE domain 583 969 1.6E-150 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 BAMF_3812 974af655af17184d4391a64b56a6818e 988 Pfam PF13700 Domain of unknown function (DUF4158) 9 172 3.8E-49 T 12-10-2018 IPR025296 Domain of unknown function DUF4158 BAMF_1968 974af655af17184d4391a64b56a6818e 988 Pfam PF01526 Tn3 transposase DDE domain 583 969 1.6E-150 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 BAMF_1968 974af655af17184d4391a64b56a6818e 988 Pfam PF13700 Domain of unknown function (DUF4158) 9 172 3.8E-49 T 12-10-2018 IPR025296 Domain of unknown function DUF4158 BAMF_1835 974af655af17184d4391a64b56a6818e 988 Pfam PF01526 Tn3 transposase DDE domain 583 969 1.6E-150 T 12-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 BAMF_1835 974af655af17184d4391a64b56a6818e 988 Pfam PF13700 Domain of unknown function (DUF4158) 9 172 3.8E-49 T 12-10-2018 IPR025296 Domain of unknown function DUF4158 BAMF_3608 0ec98c2495ef69dac30d7384fea5dc4d 412 SUPERFAMILY SSF103473 8 400 4.32E-72 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3608 0ec98c2495ef69dac30d7384fea5dc4d 412 Pfam PF07690 Major Facilitator Superfamily 24 335 2.8E-50 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_3608 0ec98c2495ef69dac30d7384fea5dc4d 412 Gene3D G3DSA:1.20.1250.20 9 396 1.6E-63 T 12-10-2018 BAMF_1872 2d32679b8d9fac76611e8fd6fd3313e0 103 Pfam PF01476 LysM domain 39 88 7.7E-9 T 12-10-2018 IPR018392 LysM domain BAMF_1872 2d32679b8d9fac76611e8fd6fd3313e0 103 Gene3D G3DSA:3.10.350.10 26 96 9.1E-9 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1872 2d32679b8d9fac76611e8fd6fd3313e0 103 Hamap MF_02014 Cell division suppressor protein YneA [yneA]. 1 102 28.739 T 12-10-2018 IPR022887 Cell division suppressor protein, YneA BAMF_1872 2d32679b8d9fac76611e8fd6fd3313e0 103 SMART SM00257 37 88 9.2E-4 T 12-10-2018 IPR018392 LysM domain BAMF_1970 6e70b1c749b6b357a627eded78263420 488 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 243 8.3E-38 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BAMF_1970 6e70b1c749b6b357a627eded78263420 488 PIRSF PIRSF000538 4 487 3.0E-66 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BAMF_1970 6e70b1c749b6b357a627eded78263420 488 SUPERFAMILY SSF53067 7 244 9.07E-44 T 12-10-2018 BAMF_1970 6e70b1c749b6b357a627eded78263420 488 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 346 440 1.9E-11 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BAMF_1970 6e70b1c749b6b357a627eded78263420 488 Gene3D G3DSA:3.30.420.40 243 487 5.1E-31 T 12-10-2018 BAMF_1970 6e70b1c749b6b357a627eded78263420 488 Gene3D G3DSA:3.30.420.40 4 242 3.2E-48 T 12-10-2018 BAMF_1970 6e70b1c749b6b357a627eded78263420 488 SUPERFAMILY SSF53067 250 460 3.19E-26 T 12-10-2018 BAMF_1990 b93e80940c703748a9c82be5b4739d36 290 Pfam PF06725 3D domain 229 289 9.4E-22 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 BAMF_1990 b93e80940c703748a9c82be5b4739d36 290 SUPERFAMILY SSF50685 231 278 4.88E-9 T 12-10-2018 IPR036908 RlpA-like domain superfamily BAMF_1990 b93e80940c703748a9c82be5b4739d36 290 Pfam PF01476 LysM domain 80 121 3.4E-16 T 12-10-2018 IPR018392 LysM domain BAMF_1990 b93e80940c703748a9c82be5b4739d36 290 Pfam PF01476 LysM domain 28 69 5.5E-13 T 12-10-2018 IPR018392 LysM domain BAMF_1990 b93e80940c703748a9c82be5b4739d36 290 SMART SM00257 27 70 8.5E-15 T 12-10-2018 IPR018392 LysM domain BAMF_1990 b93e80940c703748a9c82be5b4739d36 290 SMART SM00257 79 122 4.4E-18 T 12-10-2018 IPR018392 LysM domain BAMF_1990 b93e80940c703748a9c82be5b4739d36 290 Gene3D G3DSA:2.40.40.10 126 283 8.2E-8 T 12-10-2018 IPR036908 RlpA-like domain superfamily BAMF_1990 b93e80940c703748a9c82be5b4739d36 290 Gene3D G3DSA:3.10.350.10 24 75 1.8E-16 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1990 b93e80940c703748a9c82be5b4739d36 290 Gene3D G3DSA:3.10.350.10 76 125 4.1E-20 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1990 b93e80940c703748a9c82be5b4739d36 290 SUPERFAMILY SSF54106 79 121 3.66E-12 T 12-10-2018 BAMF_1990 b93e80940c703748a9c82be5b4739d36 290 SUPERFAMILY SSF54106 27 69 3.27E-10 T 12-10-2018 BAMF_1999 e58d6c89a2d5d0c3adfe3772703330ff 114 Gene3D G3DSA:2.30.29.50 4 113 1.2E-29 T 12-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily BAMF_1999 e58d6c89a2d5d0c3adfe3772703330ff 114 Pfam PF08000 Bacterial PH domain 11 111 7.5E-24 T 12-10-2018 IPR012544 Bacterial Pleckstrin homology domain BAMF_1999 e58d6c89a2d5d0c3adfe3772703330ff 114 SUPERFAMILY SSF50729 11 113 2.06E-27 T 12-10-2018 BAMF_1019 13d2361122b3c03f8c69f4680f8b4b94 140 Gene3D G3DSA:3.10.580.10 1 128 3.0E-40 T 12-10-2018 BAMF_1019 13d2361122b3c03f8c69f4680f8b4b94 140 Pfam PF00571 CBS domain 8 54 2.4E-13 T 12-10-2018 IPR000644 CBS domain BAMF_1019 13d2361122b3c03f8c69f4680f8b4b94 140 Pfam PF00571 CBS domain 68 118 1.9E-11 T 12-10-2018 IPR000644 CBS domain BAMF_1019 13d2361122b3c03f8c69f4680f8b4b94 140 SUPERFAMILY SSF54631 3 117 2.4E-35 T 12-10-2018 BAMF_1019 13d2361122b3c03f8c69f4680f8b4b94 140 SMART SM00116 11 58 2.7E-14 T 12-10-2018 IPR000644 CBS domain BAMF_1019 13d2361122b3c03f8c69f4680f8b4b94 140 SMART SM00116 75 122 7.0E-12 T 12-10-2018 IPR000644 CBS domain BAMF_2140 e6392f25af7187cedc2609d2e5fd5c21 928 Pfam PF04851 Type III restriction enzyme, res subunit 256 468 4.9E-6 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BAMF_2140 e6392f25af7187cedc2609d2e5fd5c21 928 SMART SM00491 762 896 1.1E-44 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BAMF_2140 e6392f25af7187cedc2609d2e5fd5c21 928 Pfam PF13307 Helicase C-terminal domain 751 908 1.7E-36 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BAMF_2140 e6392f25af7187cedc2609d2e5fd5c21 928 Pfam PF00929 Exonuclease 7 162 1.1E-37 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BAMF_2140 e6392f25af7187cedc2609d2e5fd5c21 928 SMART SM00479 5 172 1.2E-50 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BAMF_2140 e6392f25af7187cedc2609d2e5fd5c21 928 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 2 172 1.8E-29 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2140 e6392f25af7187cedc2609d2e5fd5c21 928 Gene3D G3DSA:3.30.420.10 1 172 5.6E-50 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BAMF_2140 e6392f25af7187cedc2609d2e5fd5c21 928 SUPERFAMILY SSF52540 272 890 2.21E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2140 e6392f25af7187cedc2609d2e5fd5c21 928 SUPERFAMILY SSF53098 5 191 2.76E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BAMF_2140 e6392f25af7187cedc2609d2e5fd5c21 928 Gene3D G3DSA:3.40.50.300 255 506 2.0E-39 T 12-10-2018 BAMF_2140 e6392f25af7187cedc2609d2e5fd5c21 928 Hamap MF_02206 3'-5' exonuclease DinG [dinG]. 2 928 26.455 T 12-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 BAMF_2140 e6392f25af7187cedc2609d2e5fd5c21 928 Gene3D G3DSA:3.40.50.300 715 919 8.6E-39 T 12-10-2018 BAMF_2140 e6392f25af7187cedc2609d2e5fd5c21 928 SMART SM00487 253 525 0.0018 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_2140 e6392f25af7187cedc2609d2e5fd5c21 928 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 5 910 5.9E-245 T 12-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 BAMF_0160 0a2946e0d59e3d5e1b6936321e9c717d 316 SUPERFAMILY SSF56655 33 304 8.64E-26 T 12-10-2018 BAMF_0160 0a2946e0d59e3d5e1b6936321e9c717d 316 Gene3D G3DSA:3.30.540.10 2 137 2.2E-15 T 12-10-2018 BAMF_0160 0a2946e0d59e3d5e1b6936321e9c717d 316 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 5.6E-9 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BAMF_0160 0a2946e0d59e3d5e1b6936321e9c717d 316 PRINTS PR00377 Inositol monophosphatase superfamily signature 241 265 5.6E-9 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BAMF_0160 0a2946e0d59e3d5e1b6936321e9c717d 316 PRINTS PR00377 Inositol monophosphatase superfamily signature 36 56 5.6E-9 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BAMF_0160 0a2946e0d59e3d5e1b6936321e9c717d 316 Gene3D G3DSA:3.40.190.80 173 299 5.4E-13 T 12-10-2018 BAMF_0160 0a2946e0d59e3d5e1b6936321e9c717d 316 Pfam PF00459 Inositol monophosphatase family 7 300 3.5E-18 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BAMF_2918 227153d29afd494c63f5a9c8e39d46ce 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 7.7E-24 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BAMF_2918 227153d29afd494c63f5a9c8e39d46ce 328 SUPERFAMILY SSF55347 127 292 1.44E-28 T 12-10-2018 BAMF_2918 227153d29afd494c63f5a9c8e39d46ce 328 Gene3D G3DSA:3.30.360.10 135 327 5.5E-63 T 12-10-2018 BAMF_2918 227153d29afd494c63f5a9c8e39d46ce 328 SUPERFAMILY SSF51735 2 152 1.16E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2918 227153d29afd494c63f5a9c8e39d46ce 328 Gene3D G3DSA:3.40.50.720 1 134 2.6E-37 T 12-10-2018 BAMF_1380 9e6df64fc9b4258d979a9519a6000725 274 Gene3D G3DSA:3.40.50.10780 1 209 8.8E-77 T 12-10-2018 IPR027476 D-aminopeptidase, N-terminal BAMF_1380 9e6df64fc9b4258d979a9519a6000725 274 PIRSF PIRSF015853 1 271 1.5E-105 T 12-10-2018 IPR007035 Peptidase M55, D-aminopeptidase BAMF_1380 9e6df64fc9b4258d979a9519a6000725 274 SUPERFAMILY SSF63992 1 274 1.7E-100 T 12-10-2018 IPR036177 Peptidase M55, D-aminopeptidase superfamily BAMF_1380 9e6df64fc9b4258d979a9519a6000725 274 Pfam PF04951 D-aminopeptidase 1 262 8.9E-92 T 12-10-2018 IPR007035 Peptidase M55, D-aminopeptidase BAMF_1380 9e6df64fc9b4258d979a9519a6000725 274 Gene3D G3DSA:3.30.1360.130 210 274 5.7E-29 T 12-10-2018 BAMF_2291 8c977cf822f776cd11db8df36be4f2fa 507 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 190 201 5.3E-7 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2291 8c977cf822f776cd11db8df36be4f2fa 507 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 91 105 5.3E-7 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2291 8c977cf822f776cd11db8df36be4f2fa 507 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 125 143 5.3E-7 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2291 8c977cf822f776cd11db8df36be4f2fa 507 SUPERFAMILY SSF52096 3 249 4.07E-78 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_2291 8c977cf822f776cd11db8df36be4f2fa 507 Gene3D G3DSA:3.90.226.10 254 507 9.5E-85 T 12-10-2018 BAMF_2291 8c977cf822f776cd11db8df36be4f2fa 507 Pfam PF01039 Carboxyl transferase domain 28 505 3.3E-180 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 BAMF_2291 8c977cf822f776cd11db8df36be4f2fa 507 SUPERFAMILY SSF52096 239 507 3.77E-80 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_2291 8c977cf822f776cd11db8df36be4f2fa 507 Gene3D G3DSA:3.90.226.10 2 253 1.8E-92 T 12-10-2018 BAMF_3418 00871a8e5ca4c671e4c71c2e98b97cf7 483 PIRSF PIRSF005690 1 483 2.8E-183 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BAMF_3418 00871a8e5ca4c671e4c71c2e98b97cf7 483 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 13 472 3.0E-170 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BAMF_3293 0825805c47df1ea7672ce01e419baa84 176 SUPERFAMILY SSF53597 5 167 5.37E-37 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BAMF_3293 0825805c47df1ea7672ce01e419baa84 176 Pfam PF01872 RibD C-terminal domain 6 166 7.9E-19 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 BAMF_3293 0825805c47df1ea7672ce01e419baa84 176 Gene3D G3DSA:3.40.430.10 3 176 6.1E-48 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BAMF_0071 f677048a71caf8f62a7857c3fcdf9f44 291 SUPERFAMILY SSF64397 1 239 2.22E-78 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 BAMF_0071 f677048a71caf8f62a7857c3fcdf9f44 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 1 289 41.229 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BAMF_0071 f677048a71caf8f62a7857c3fcdf9f44 291 PIRSF PIRSF005261 1 290 2.0E-77 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BAMF_0071 f677048a71caf8f62a7857c3fcdf9f44 291 SUPERFAMILY SSF118352 229 288 3.01E-22 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 BAMF_0071 f677048a71caf8f62a7857c3fcdf9f44 291 Gene3D G3DSA:3.55.30.10 1 234 4.2E-99 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 BAMF_0071 f677048a71caf8f62a7857c3fcdf9f44 291 Pfam PF01430 Hsp33 protein 2 278 5.8E-91 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BAMF_0071 f677048a71caf8f62a7857c3fcdf9f44 291 Gene3D G3DSA:3.90.1280.10 235 291 4.4E-25 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 BAMF_0289 bc7bc9b3a160a07ee2c9be2d87f1791b 240 Gene3D G3DSA:1.20.1250.20 39 236 6.3E-31 T 12-10-2018 BAMF_0289 bc7bc9b3a160a07ee2c9be2d87f1791b 240 SUPERFAMILY SSF103473 8 236 8.89E-33 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0289 bc7bc9b3a160a07ee2c9be2d87f1791b 240 Pfam PF07690 Major Facilitator Superfamily 16 196 2.3E-16 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_3854 b4a03af29e77a85fe1c51a363e1291e6 398 Pfam PF13365 Trypsin-like peptidase domain 108 255 5.4E-31 T 12-10-2018 BAMF_3854 b4a03af29e77a85fe1c51a363e1291e6 398 Gene3D G3DSA:2.30.42.10 296 397 1.6E-24 T 12-10-2018 BAMF_3854 b4a03af29e77a85fe1c51a363e1291e6 398 PRINTS PR00834 HtrA/DegQ protease family signature 339 351 1.0E-35 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_3854 b4a03af29e77a85fe1c51a363e1291e6 398 PRINTS PR00834 HtrA/DegQ protease family signature 120 132 1.0E-35 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_3854 b4a03af29e77a85fe1c51a363e1291e6 398 PRINTS PR00834 HtrA/DegQ protease family signature 141 161 1.0E-35 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_3854 b4a03af29e77a85fe1c51a363e1291e6 398 PRINTS PR00834 HtrA/DegQ protease family signature 226 243 1.0E-35 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_3854 b4a03af29e77a85fe1c51a363e1291e6 398 PRINTS PR00834 HtrA/DegQ protease family signature 248 265 1.0E-35 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_3854 b4a03af29e77a85fe1c51a363e1291e6 398 PRINTS PR00834 HtrA/DegQ protease family signature 182 206 1.0E-35 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_3854 b4a03af29e77a85fe1c51a363e1291e6 398 Gene3D G3DSA:2.40.10.10 174 295 5.7E-37 T 12-10-2018 BAMF_3854 b4a03af29e77a85fe1c51a363e1291e6 398 SMART SM00228 293 381 1.2E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_3854 b4a03af29e77a85fe1c51a363e1291e6 398 SUPERFAMILY SSF50494 76 289 1.35E-54 T 12-10-2018 IPR009003 Peptidase S1, PA clan BAMF_3854 b4a03af29e77a85fe1c51a363e1291e6 398 Gene3D G3DSA:2.40.10.10 63 173 2.1E-25 T 12-10-2018 BAMF_3854 b4a03af29e77a85fe1c51a363e1291e6 398 Pfam PF13180 PDZ domain 293 390 6.2E-22 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_3854 b4a03af29e77a85fe1c51a363e1291e6 398 SUPERFAMILY SSF50156 292 390 5.26E-18 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 SUPERFAMILY SSF81442 14 523 2.75E-177 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 245 299 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 289 304 2.8E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 376 395 2.8E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 17 42 2.8E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 366 2.8E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 313 334 2.8E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 163 181 2.8E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 64 87 2.8E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 133 145 2.8E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 192 211 2.8E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 426 447 2.8E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 91 115 2.8E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 243 264 2.8E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 18 521 9.2E-207 T 12-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 Gene3D G3DSA:1.20.210.10 3 530 9.4E-204 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1564 27fb3bd98b21350c2e780d5ac8e07b71 622 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 26 469 4.9E-147 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 Gene3D G3DSA:2.40.37.10 11 369 1.8E-131 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 Hamap MF_01201 Alanine racemase. 7 370 35.005 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 SUPERFAMILY SSF50621 240 380 9.07E-50 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 38 48 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 TIGRFAM TIGR00492 alr: alanine racemase 8 370 9.2E-144 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 SMART SM01005 245 370 9.0E-65 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 PRINTS PR00992 Alanine racemase signature 33 49 9.2E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 PRINTS PR00992 Alanine racemase signature 261 276 9.2E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 PRINTS PR00992 Alanine racemase signature 69 87 9.2E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 PRINTS PR00992 Alanine racemase signature 163 174 9.2E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 PRINTS PR00992 Alanine racemase signature 298 315 9.2E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 PRINTS PR00992 Alanine racemase signature 352 365 9.2E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 PRINTS PR00992 Alanine racemase signature 128 140 9.2E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 PRINTS PR00992 Alanine racemase signature 278 293 9.2E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 PRINTS PR00992 Alanine racemase signature 203 230 9.2E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 SUPERFAMILY SSF51419 14 245 2.62E-66 T 12-10-2018 IPR029066 PLP-binding barrel BAMF_0441 181f7361829adf368c21d0b9643b685b 389 Pfam PF00842 Alanine racemase, C-terminal domain 246 368 1.9E-43 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_0441 181f7361829adf368c21d0b9643b685b 389 Gene3D G3DSA:3.20.20.10 16 233 1.8E-131 T 12-10-2018 IPR029066 PLP-binding barrel BAMF_0441 181f7361829adf368c21d0b9643b685b 389 Pfam PF01168 Alanine racemase, N-terminal domain 14 230 1.6E-68 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_0660 daba5e22bcaeb9c5b9a0bbd43cccf443 230 PRINTS PR01837 MgtC/SapB protein signature 97 121 5.8E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BAMF_0660 daba5e22bcaeb9c5b9a0bbd43cccf443 230 PRINTS PR01837 MgtC/SapB protein signature 69 91 5.8E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BAMF_0660 daba5e22bcaeb9c5b9a0bbd43cccf443 230 PRINTS PR01837 MgtC/SapB protein signature 16 35 5.8E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BAMF_0660 daba5e22bcaeb9c5b9a0bbd43cccf443 230 PRINTS PR01837 MgtC/SapB protein signature 35 53 5.8E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BAMF_0660 daba5e22bcaeb9c5b9a0bbd43cccf443 230 Pfam PF02308 MgtC family 13 141 1.1E-32 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 11 94 1.0E-25 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 7 556 4.8E-189 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 SUPERFAMILY SSF52374 118 448 2.08E-98 T 12-10-2018 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 Pfam PF05746 DALR anticodon binding domain 438 556 7.5E-39 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 Gene3D G3DSA:3.30.1360.70 3 114 2.5E-29 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 Gene3D G3DSA:3.40.50.620 124 431 7.5E-178 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 134 143 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 SMART SM01016 5 95 3.2E-36 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 SMART SM00836 437 556 1.9E-57 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 1.3E-23 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 1.3E-23 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 1.3E-23 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 1.3E-23 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 SUPERFAMILY SSF47323 432 556 9.16E-38 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 SUPERFAMILY SSF55190 5 115 1.31E-28 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 Pfam PF00750 tRNA synthetases class I (R) 104 400 2.8E-26 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 Gene3D G3DSA:1.10.730.10 432 556 7.5E-178 T 12-10-2018 BAMF_3568 128b46e7b25e3c5ea524921070cb04c8 556 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 556 28.853 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BAMF_3108 0c1761be86ca3cbf21c2543ca3acccde 406 Pfam PF00266 Aminotransferase class-V 23 391 1.0E-163 T 12-10-2018 IPR000192 Aminotransferase class V domain BAMF_3108 0c1761be86ca3cbf21c2543ca3acccde 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 5 402 5.4E-193 T 12-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BAMF_3108 0c1761be86ca3cbf21c2543ca3acccde 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 215 234 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BAMF_3108 0c1761be86ca3cbf21c2543ca3acccde 406 SUPERFAMILY SSF53383 2 398 4.44E-134 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_3108 0c1761be86ca3cbf21c2543ca3acccde 406 Gene3D G3DSA:3.40.640.10 34 294 6.7E-185 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_3108 0c1761be86ca3cbf21c2543ca3acccde 406 Gene3D G3DSA:3.90.1150.10 6 395 6.7E-185 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_3108 0c1761be86ca3cbf21c2543ca3acccde 406 PIRSF PIRSF005572 20 404 1.5E-49 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BAMF_0732 580f6be8121cfecbe9fd7aaec19def99 90 Pfam PF00708 Acylphosphatase 5 88 1.3E-26 T 12-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BAMF_0732 580f6be8121cfecbe9fd7aaec19def99 90 PRINTS PR00112 Acylphosphatase signature 3 18 7.7E-5 T 12-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BAMF_0732 580f6be8121cfecbe9fd7aaec19def99 90 PRINTS PR00112 Acylphosphatase signature 24 49 7.7E-5 T 12-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BAMF_0732 580f6be8121cfecbe9fd7aaec19def99 90 Gene3D G3DSA:3.30.70.100 1 90 7.7E-34 T 12-10-2018 BAMF_0732 580f6be8121cfecbe9fd7aaec19def99 90 SUPERFAMILY SSF54975 2 89 2.05E-27 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BAMF_0732 580f6be8121cfecbe9fd7aaec19def99 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 32 48 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BAMF_3826 dcb7af2a2a81d9f24313f33f3e183621 161 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 55 4.4E-6 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 BAMF_3826 dcb7af2a2a81d9f24313f33f3e183621 161 Gene3D G3DSA:1.10.150.120 80 157 4.5E-28 T 12-10-2018 BAMF_3826 dcb7af2a2a81d9f24313f33f3e183621 161 Gene3D G3DSA:3.10.20.30 2 78 6.5E-29 T 12-10-2018 IPR012675 Beta-grasp domain superfamily BAMF_3826 dcb7af2a2a81d9f24313f33f3e183621 161 SUPERFAMILY SSF54292 4 88 6.95E-23 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BAMF_3826 dcb7af2a2a81d9f24313f33f3e183621 161 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 BAMF_3826 dcb7af2a2a81d9f24313f33f3e183621 161 SUPERFAMILY SSF47741 75 154 1.96E-29 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily BAMF_3826 dcb7af2a2a81d9f24313f33f3e183621 161 Pfam PF01799 [2Fe-2S] binding domain 75 144 1.2E-26 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 BAMF_0248 3b128f24dc9efd46601c0f0750d7f057 310 PRINTS PR00069 Aldo-keto reductase signature 111 129 6.2E-15 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_0248 3b128f24dc9efd46601c0f0750d7f057 310 PRINTS PR00069 Aldo-keto reductase signature 242 266 6.2E-15 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_0248 3b128f24dc9efd46601c0f0750d7f057 310 PRINTS PR00069 Aldo-keto reductase signature 142 159 6.2E-15 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_0248 3b128f24dc9efd46601c0f0750d7f057 310 PRINTS PR00069 Aldo-keto reductase signature 45 69 6.2E-15 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_0248 3b128f24dc9efd46601c0f0750d7f057 310 Gene3D G3DSA:3.20.20.100 3 310 1.4E-114 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_0248 3b128f24dc9efd46601c0f0750d7f057 310 Pfam PF00248 Aldo/keto reductase family 16 308 6.4E-76 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain BAMF_0248 3b128f24dc9efd46601c0f0750d7f057 310 SUPERFAMILY SSF51430 3 309 2.23E-96 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_1456 de9dfb863945470d84d86e2de7864498 91 Gene3D G3DSA:2.40.30.80 1 91 1.7E-31 T 12-10-2018 IPR023105 YkvR-like superfamily BAMF_1456 de9dfb863945470d84d86e2de7864498 91 SUPERFAMILY SSF159173 2 91 1.16E-40 T 12-10-2018 IPR023105 YkvR-like superfamily BAMF_1456 de9dfb863945470d84d86e2de7864498 91 Pfam PF11514 Protein of unknown function (DUF3219) 4 91 8.5E-34 T 12-10-2018 IPR021596 Protein of unknown function DUF3219 BAMF_1688 6fb9f0d9399000a187fe79563e4bccb9 259 PIRSF PIRSF011572 1 257 6.0E-124 T 12-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 BAMF_1688 6fb9f0d9399000a187fe79563e4bccb9 259 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 3 253 1.5E-130 T 12-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 BAMF_1688 6fb9f0d9399000a187fe79563e4bccb9 259 SUPERFAMILY SSF46785 167 256 4.85E-42 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1688 6fb9f0d9399000a187fe79563e4bccb9 259 Gene3D G3DSA:3.30.450.40 1 159 1.6E-73 T 12-10-2018 IPR029016 GAF-like domain superfamily BAMF_1688 6fb9f0d9399000a187fe79563e4bccb9 259 Gene3D G3DSA:1.10.10.10 160 259 1.0E-47 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1688 6fb9f0d9399000a187fe79563e4bccb9 259 Pfam PF06018 CodY GAF-like domain 3 178 4.3E-83 T 12-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 BAMF_1688 6fb9f0d9399000a187fe79563e4bccb9 259 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 259 149.863 T 12-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 BAMF_1688 6fb9f0d9399000a187fe79563e4bccb9 259 Pfam PF08222 CodY helix-turn-helix domain 198 257 5.4E-37 T 12-10-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 SMART SM00865 207 324 5.4E-54 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 SUPERFAMILY SSF52490 13 208 9.03E-72 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 Gene3D G3DSA:3.30.1330.20 221 330 7.7E-42 T 12-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 SUPERFAMILY SSF55307 204 315 6.41E-43 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 352 39.249 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 173 9.2E-45 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 PRINTS PR00423 Cell division protein FtsZ signature 189 211 1.5E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 PRINTS PR00423 Cell division protein FtsZ signature 98 118 1.5E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 PRINTS PR00423 Cell division protein FtsZ signature 126 147 1.5E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 PRINTS PR00423 Cell division protein FtsZ signature 212 233 1.5E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 Pfam PF12327 FtsZ family, C-terminal domain 222 315 3.7E-32 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 Gene3D G3DSA:3.40.50.1440 6 220 1.4E-83 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 SMART SM00864 13 205 1.4E-116 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BAMF_1600 aad46e6a108e30f99207b6c203bf8b4d 382 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 331 2.5E-141 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 BAMF_0881 7de5c92e93dcd84962a7a05e4eb84485 145 Pfam PF01475 Ferric uptake regulator family 16 133 1.4E-40 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BAMF_0881 7de5c92e93dcd84962a7a05e4eb84485 145 SUPERFAMILY SSF46785 8 137 1.64E-42 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0881 7de5c92e93dcd84962a7a05e4eb84485 145 Gene3D G3DSA:1.10.10.10 1 87 1.4E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0881 7de5c92e93dcd84962a7a05e4eb84485 145 Gene3D G3DSA:3.30.1490.190 88 145 9.6E-26 T 12-10-2018 BAMF_0279 c9bac40dc658c8885fc53eb3a879feaf 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 1.3E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0279 c9bac40dc658c8885fc53eb3a879feaf 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 1.3E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0279 c9bac40dc658c8885fc53eb3a879feaf 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 1.3E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0279 c9bac40dc658c8885fc53eb3a879feaf 153 SUPERFAMILY SSF46785 9 149 2.5E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0279 c9bac40dc658c8885fc53eb3a879feaf 153 Gene3D G3DSA:1.10.10.10 2 153 4.6E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0279 c9bac40dc658c8885fc53eb3a879feaf 153 SMART SM00347 31 131 3.3E-23 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0279 c9bac40dc658c8885fc53eb3a879feaf 153 Pfam PF01047 MarR family 48 96 3.7E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1514 d7569d17a1ae33923d6e07200b116c81 634 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 133 1.9E-39 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 BAMF_1514 d7569d17a1ae33923d6e07200b116c81 634 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 299 628 4.9E-129 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 BAMF_1514 d7569d17a1ae33923d6e07200b116c81 634 Gene3D G3DSA:3.40.50.2300 169 273 8.3E-43 T 12-10-2018 BAMF_1514 d7569d17a1ae33923d6e07200b116c81 634 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 148 1.1E-39 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BAMF_1514 d7569d17a1ae33923d6e07200b116c81 634 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 174 255 4.0E-31 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 BAMF_1514 d7569d17a1ae33923d6e07200b116c81 634 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 174 263 8.7E-18 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BAMF_1514 d7569d17a1ae33923d6e07200b116c81 634 SUPERFAMILY SSF55804 2 148 7.85E-45 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BAMF_1514 d7569d17a1ae33923d6e07200b116c81 634 SUPERFAMILY SSF52794 171 273 7.85E-38 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BAMF_1514 d7569d17a1ae33923d6e07200b116c81 634 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain BAMF_1514 d7569d17a1ae33923d6e07200b116c81 634 Gene3D G3DSA:3.40.930.10 1 151 3.1E-48 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BAMF_2055 8ba8458e06e5d2bba6931403d5d01b62 149 Gene3D G3DSA:3.20.80.10 1 149 2.9E-35 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BAMF_2055 8ba8458e06e5d2bba6931403d5d01b62 149 SMART SM00871 1 149 2.2E-30 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding BAMF_2055 8ba8458e06e5d2bba6931403d5d01b62 149 Pfam PF06445 GyrI-like small molecule binding domain 3 148 6.0E-28 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain BAMF_2055 8ba8458e06e5d2bba6931403d5d01b62 149 SUPERFAMILY SSF55136 2 149 2.62E-29 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BAMF_2415 f574ebf8d0751f38449b073ec2127cce 373 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 369 6.3E-106 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BAMF_2415 f574ebf8d0751f38449b073ec2127cce 373 PIRSF PIRSF037489 3 373 9.2E-159 T 12-10-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria BAMF_2415 f574ebf8d0751f38449b073ec2127cce 373 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 9 349 4.8E-81 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BAMF_2415 f574ebf8d0751f38449b073ec2127cce 373 Gene3D G3DSA:3.30.70.120 133 240 1.2E-43 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BAMF_2415 f574ebf8d0751f38449b073ec2127cce 373 Gene3D G3DSA:3.40.1390.30 4 122 2.7E-41 T 12-10-2018 BAMF_2415 f574ebf8d0751f38449b073ec2127cce 373 SUPERFAMILY SSF102705 6 372 2.49E-135 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily BAMF_3901 3e9340ffc9c6ac3d43593f3db26b30fb 252 Gene3D G3DSA:3.60.10.10 1 251 2.0E-98 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BAMF_3901 3e9340ffc9c6ac3d43593f3db26b30fb 252 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 250 1.5E-103 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 BAMF_3901 3e9340ffc9c6ac3d43593f3db26b30fb 252 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 12-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 BAMF_3901 3e9340ffc9c6ac3d43593f3db26b30fb 252 SUPERFAMILY SSF56219 1 252 1.44E-82 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BAMF_3901 3e9340ffc9c6ac3d43593f3db26b30fb 252 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 243 2.4E-26 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase BAMF_3901 3e9340ffc9c6ac3d43593f3db26b30fb 252 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 250 4.8E-104 T 12-10-2018 BAMF_1770 849a87241b573bca23bf54d5366520bc 86 Gene3D G3DSA:3.30.110.20 1 86 8.6E-37 T 12-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 BAMF_1770 849a87241b573bca23bf54d5366520bc 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 84 2.2E-40 T 12-10-2018 IPR007347 Sporulation stage V, protein S BAMF_1770 849a87241b573bca23bf54d5366520bc 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 8.0E-33 T 12-10-2018 IPR007347 Sporulation stage V, protein S BAMF_2782 7b34ad8c0f2d74842490028d90c04af3 269 PIRSF PIRSF012562 1 268 1.2E-136 T 12-10-2018 IPR010838 Protein of unknown unction DUF1444 BAMF_2782 7b34ad8c0f2d74842490028d90c04af3 269 Pfam PF07285 Protein of unknown function (DUF1444) 3 267 2.0E-128 T 12-10-2018 IPR010838 Protein of unknown unction DUF1444 BAMF_2782 7b34ad8c0f2d74842490028d90c04af3 269 Hamap MF_01548 UPF0354 protein . 3 268 47.397 T 12-10-2018 IPR010838 Protein of unknown unction DUF1444 BAMF_0727 6eddb9d78c9f8951aeecde74d5c7e6aa 254 Pfam PF00072 Response regulator receiver domain 32 141 2.0E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0727 6eddb9d78c9f8951aeecde74d5c7e6aa 254 SMART SM00448 30 143 4.9E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0727 6eddb9d78c9f8951aeecde74d5c7e6aa 254 Pfam PF08279 HTH domain 190 227 1.7E-4 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BAMF_0727 6eddb9d78c9f8951aeecde74d5c7e6aa 254 PIRSF PIRSF006171 28 254 2.7E-76 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 BAMF_0727 6eddb9d78c9f8951aeecde74d5c7e6aa 254 Gene3D G3DSA:3.40.50.12740 30 236 2.7E-30 T 12-10-2018 BAMF_0727 6eddb9d78c9f8951aeecde74d5c7e6aa 254 SUPERFAMILY SSF52172 31 163 1.85E-29 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 295 4.1E-53 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.9E-37 T 12-10-2018 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 2.9E-37 T 12-10-2018 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 2.9E-37 T 12-10-2018 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.9E-37 T 12-10-2018 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 2.9E-37 T 12-10-2018 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 306 1.6E-122 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 9.2E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 9.2E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 9.2E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 9.2E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 196 212 9.2E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 287 9.2E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 42 57 9.2E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 235 256 9.2E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 9.2E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 SUPERFAMILY SSF51905 3 303 1.84E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 Gene3D G3DSA:3.50.50.60 9 302 2.3E-115 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 BAMF_3326 27ddb4a35d845c6c7aeeeb4aae28ab2c 317 Gene3D G3DSA:3.50.50.60 118 241 2.3E-115 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0013 bae5e3d3d9d00a08d9312e41ec940993 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 2.7E-31 T 12-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 BAMF_0013 bae5e3d3d9d00a08d9312e41ec940993 425 SUPERFAMILY SSF55681 117 422 2.76E-105 T 12-10-2018 BAMF_0013 bae5e3d3d9d00a08d9312e41ec940993 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 44.184 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BAMF_0013 bae5e3d3d9d00a08d9312e41ec940993 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 220 400 1.9E-38 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_0013 bae5e3d3d9d00a08d9312e41ec940993 425 SUPERFAMILY SSF46589 1 113 4.6E-31 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BAMF_0013 bae5e3d3d9d00a08d9312e41ec940993 425 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 2.0E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BAMF_0013 bae5e3d3d9d00a08d9312e41ec940993 425 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 2.0E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BAMF_0013 bae5e3d3d9d00a08d9312e41ec940993 425 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 2.0E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BAMF_0013 bae5e3d3d9d00a08d9312e41ec940993 425 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 2.0E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BAMF_0013 bae5e3d3d9d00a08d9312e41ec940993 425 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 2.0E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BAMF_0013 bae5e3d3d9d00a08d9312e41ec940993 425 Gene3D G3DSA:1.10.287.40 1 105 6.7E-26 T 12-10-2018 BAMF_0013 bae5e3d3d9d00a08d9312e41ec940993 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 8.0E-188 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BAMF_0013 bae5e3d3d9d00a08d9312e41ec940993 425 Gene3D G3DSA:3.30.930.10 106 425 5.1E-129 T 12-10-2018 BAMF_0013 bae5e3d3d9d00a08d9312e41ec940993 425 PIRSF PIRSF001529 1 425 1.3E-190 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BAMF_1367 ac50137a7c8b8150dae52d2585fa6122 87 Pfam PF10779 Haemolysin XhlA 10 72 4.0E-18 T 12-10-2018 IPR019715 Haemolysin XhlA BAMF_3758 f302b604b43d6d723da6d68496ef966d 513 Gene3D G3DSA:1.10.275.10 2 196 4.7E-69 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal BAMF_3758 f302b604b43d6d723da6d68496ef966d 513 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 154 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 BAMF_3758 f302b604b43d6d723da6d68496ef966d 513 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 2 501 45.319 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BAMF_3758 f302b604b43d6d723da6d68496ef966d 513 SUPERFAMILY SSF48557 2 496 1.33E-191 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 BAMF_3758 f302b604b43d6d723da6d68496ef966d 513 Pfam PF00221 Aromatic amino acid lyase 10 467 2.8E-193 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 BAMF_3758 f302b604b43d6d723da6d68496ef966d 513 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 3 500 3.0E-229 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BAMF_3758 f302b604b43d6d723da6d68496ef966d 513 Gene3D G3DSA:1.20.200.10 197 503 4.9E-122 T 12-10-2018 BAMF_3454 a229f9731c9bc8039baf0817f2d154a2 525 Gene3D G3DSA:1.10.246.130 234 339 4.1E-31 T 12-10-2018 BAMF_3454 a229f9731c9bc8039baf0817f2d154a2 525 SUPERFAMILY SSF56235 5 524 5.4E-167 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BAMF_3454 a229f9731c9bc8039baf0817f2d154a2 525 Gene3D G3DSA:3.60.20.40 340 525 8.2E-69 T 12-10-2018 BAMF_3454 a229f9731c9bc8039baf0817f2d154a2 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 102 120 6.6E-42 T 12-10-2018 BAMF_3454 a229f9731c9bc8039baf0817f2d154a2 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 32 57 6.6E-42 T 12-10-2018 BAMF_3454 a229f9731c9bc8039baf0817f2d154a2 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 218 234 6.6E-42 T 12-10-2018 BAMF_3454 a229f9731c9bc8039baf0817f2d154a2 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 339 357 6.6E-42 T 12-10-2018 BAMF_3454 a229f9731c9bc8039baf0817f2d154a2 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 421 438 6.6E-42 T 12-10-2018 BAMF_3454 a229f9731c9bc8039baf0817f2d154a2 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 247 266 6.6E-42 T 12-10-2018 BAMF_3454 a229f9731c9bc8039baf0817f2d154a2 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 363 381 6.6E-42 T 12-10-2018 BAMF_3454 a229f9731c9bc8039baf0817f2d154a2 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 394 409 6.6E-42 T 12-10-2018 BAMF_3454 a229f9731c9bc8039baf0817f2d154a2 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 120 139 6.6E-42 T 12-10-2018 BAMF_3454 a229f9731c9bc8039baf0817f2d154a2 525 Pfam PF01019 Gamma-glutamyltranspeptidase 26 520 2.0E-159 T 12-10-2018 BAMF_3454 a229f9731c9bc8039baf0817f2d154a2 525 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 10 517 4.7E-187 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 BAMF_0791 284c14b896a2f6a987bf43481bd67a84 577 SUPERFAMILY SSF52540 323 565 3.51E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0791 284c14b896a2f6a987bf43481bd67a84 577 Gene3D G3DSA:1.20.1560.10 1 313 8.0E-81 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_0791 284c14b896a2f6a987bf43481bd67a84 577 Gene3D G3DSA:3.40.50.300 322 576 1.0E-86 T 12-10-2018 BAMF_0791 284c14b896a2f6a987bf43481bd67a84 577 SMART SM00382 356 540 5.6E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0791 284c14b896a2f6a987bf43481bd67a84 577 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0791 284c14b896a2f6a987bf43481bd67a84 577 Pfam PF00664 ABC transporter transmembrane region 17 285 6.1E-42 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BAMF_0791 284c14b896a2f6a987bf43481bd67a84 577 SUPERFAMILY SSF90123 5 316 6.41E-71 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_0791 284c14b896a2f6a987bf43481bd67a84 577 Pfam PF00005 ABC transporter 347 496 1.9E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0165 148b9978e3a0aa4b3c974bdb61c639d9 339 SUPERFAMILY SSF81345 4 332 6.8E-75 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_0165 148b9978e3a0aa4b3c974bdb61c639d9 339 Gene3D G3DSA:1.10.3470.10 2 337 2.8E-91 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_0165 148b9978e3a0aa4b3c974bdb61c639d9 339 Pfam PF01032 FecCD transport family 14 332 5.4E-82 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BAMF_2463 5a2078b6bb98b2adb9e28339d4dbc55a 96 SUPERFAMILY SSF75471 1 94 4.71E-32 T 12-10-2018 IPR035920 YhbY-like superfamily BAMF_2463 5a2078b6bb98b2adb9e28339d4dbc55a 96 Gene3D G3DSA:3.30.110.60 1 96 6.2E-39 T 12-10-2018 IPR035920 YhbY-like superfamily BAMF_2463 5a2078b6bb98b2adb9e28339d4dbc55a 96 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 1.7E-23 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BAMF_2463 5a2078b6bb98b2adb9e28339d4dbc55a 96 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 8 96 4.0E-45 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BAMF_2463 5a2078b6bb98b2adb9e28339d4dbc55a 96 SMART SM01103 2 85 1.3E-44 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BAMF_2463 5a2078b6bb98b2adb9e28339d4dbc55a 96 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 96 1.3E-46 T 12-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 BAMF_2829 3b3ded6aeca2fff86e0394423fecb116 130 SMART SM00345 16 75 9.3E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_2829 3b3ded6aeca2fff86e0394423fecb116 130 Gene3D G3DSA:1.10.10.10 8 127 2.4E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2829 3b3ded6aeca2fff86e0394423fecb116 130 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 3.3E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_2829 3b3ded6aeca2fff86e0394423fecb116 130 SUPERFAMILY SSF46785 5 79 6.83E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1534 4e0cd880384785e86ef5042d223775b0 325 SUPERFAMILY SSF52518 2 204 2.41E-66 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_1534 4e0cd880384785e86ef5042d223775b0 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 1.6E-40 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BAMF_1534 4e0cd880384785e86ef5042d223775b0 325 SUPERFAMILY SSF52922 188 325 5.1E-42 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BAMF_1534 4e0cd880384785e86ef5042d223775b0 325 Gene3D G3DSA:3.40.50.920 193 325 1.2E-48 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BAMF_1534 4e0cd880384785e86ef5042d223775b0 325 SMART SM00861 4 179 4.6E-63 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BAMF_1534 4e0cd880384785e86ef5042d223775b0 325 Pfam PF02780 Transketolase, C-terminal domain 194 314 3.7E-40 T 12-10-2018 IPR033248 Transketolase, C-terminal domain BAMF_1534 4e0cd880384785e86ef5042d223775b0 325 Gene3D G3DSA:3.40.50.970 1 192 6.6E-81 T 12-10-2018 BAMF_3779 73de168c34346d402e7fa6c591960c29 290 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BAMF_3779 73de168c34346d402e7fa6c591960c29 290 PIRSF PIRSF001359 1 284 2.0E-120 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BAMF_3779 73de168c34346d402e7fa6c591960c29 290 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 284 2.4E-113 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BAMF_3779 73de168c34346d402e7fa6c591960c29 290 Gene3D G3DSA:3.20.20.70 1 289 8.2E-106 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_3779 73de168c34346d402e7fa6c591960c29 290 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BAMF_3779 73de168c34346d402e7fa6c591960c29 290 SUPERFAMILY SSF51569 1 284 1.13E-95 T 12-10-2018 BAMF_3779 73de168c34346d402e7fa6c591960c29 290 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 284 3.4E-127 T 12-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 BAMF_3779 73de168c34346d402e7fa6c591960c29 290 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 283 5.9E-96 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BAMF_2484 7e7ab95ed43aba01d50243f26879c3d2 330 SUPERFAMILY SSF53474 43 321 1.87E-26 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2484 7e7ab95ed43aba01d50243f26879c3d2 330 Gene3D G3DSA:1.10.1200.10 17 82 8.9E-16 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_2484 7e7ab95ed43aba01d50243f26879c3d2 330 Pfam PF12697 Alpha/beta hydrolase family 136 316 1.2E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_2484 7e7ab95ed43aba01d50243f26879c3d2 330 Pfam PF00550 Phosphopantetheine attachment site 17 77 4.3E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_2484 7e7ab95ed43aba01d50243f26879c3d2 330 Gene3D G3DSA:3.40.50.1820 89 325 1.3E-24 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1081 bfc1357f905933fda1a32db111570c3b 298 Pfam PF00005 ABC transporter 17 157 7.8E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1081 bfc1357f905933fda1a32db111570c3b 298 Pfam PF13732 Domain of unknown function (DUF4162) 211 293 2.9E-21 T 12-10-2018 IPR025302 Domain of unknown function DUF4162 BAMF_1081 bfc1357f905933fda1a32db111570c3b 298 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_1081 bfc1357f905933fda1a32db111570c3b 298 SMART SM00382 26 205 5.9E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1081 bfc1357f905933fda1a32db111570c3b 298 SUPERFAMILY SSF52540 2 223 3.47E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1081 bfc1357f905933fda1a32db111570c3b 298 Gene3D G3DSA:3.40.50.300 1 232 1.2E-58 T 12-10-2018 BAMF_2101 b346cb20b1f0fd98a70798f5375ccae5 295 SMART SM00279 176 211 5.5E-18 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 BAMF_2101 b346cb20b1f0fd98a70798f5375ccae5 295 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 174 261 6.7E-27 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 BAMF_2101 b346cb20b1f0fd98a70798f5375ccae5 295 SUPERFAMILY SSF88723 3 156 1.13E-44 T 12-10-2018 IPR029060 PIN-like domain superfamily BAMF_2101 b346cb20b1f0fd98a70798f5375ccae5 295 Gene3D G3DSA:1.10.150.20 177 249 2.5E-80 T 12-10-2018 BAMF_2101 b346cb20b1f0fd98a70798f5375ccae5 295 Gene3D G3DSA:3.40.50.1010 5 261 2.5E-80 T 12-10-2018 BAMF_2101 b346cb20b1f0fd98a70798f5375ccae5 295 SMART SM00475 3 264 1.6E-129 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 BAMF_2101 b346cb20b1f0fd98a70798f5375ccae5 295 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 171 7.5E-48 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 BAMF_2101 b346cb20b1f0fd98a70798f5375ccae5 295 SUPERFAMILY SSF47807 174 286 1.11E-26 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BAMF_0004 de72691629df0c1d7e7630a226df4e8f 370 SUPERFAMILY SSF52540 2 350 1.69E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0004 de72691629df0c1d7e7630a226df4e8f 370 Gene3D G3DSA:3.40.50.300 6 345 2.8E-110 T 12-10-2018 BAMF_0004 de72691629df0c1d7e7630a226df4e8f 370 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 BAMF_0004 de72691629df0c1d7e7630a226df4e8f 370 Gene3D G3DSA:1.20.1050.90 119 311 2.8E-110 T 12-10-2018 BAMF_0004 de72691629df0c1d7e7630a226df4e8f 370 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 BAMF_0004 de72691629df0c1d7e7630a226df4e8f 370 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 366 6.8E-143 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 BAMF_0004 de72691629df0c1d7e7630a226df4e8f 370 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 348 2.3E-19 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal BAMF_0004 de72691629df0c1d7e7630a226df4e8f 370 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 370 104.909 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 BAMF_3677 9d31d6e38c5d5c20100da917d3fc50ef 582 PRINTS PR00723 Subtilisin serine protease family (S8) signature 131 150 8.7E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_3677 9d31d6e38c5d5c20100da917d3fc50ef 582 PRINTS PR00723 Subtilisin serine protease family (S8) signature 166 179 8.7E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_3677 9d31d6e38c5d5c20100da917d3fc50ef 582 PRINTS PR00723 Subtilisin serine protease family (S8) signature 321 337 8.7E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_3677 9d31d6e38c5d5c20100da917d3fc50ef 582 SUPERFAMILY SSF52743 113 377 9.95E-86 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BAMF_3677 9d31d6e38c5d5c20100da917d3fc50ef 582 Gene3D G3DSA:1.10.10.1270 527 581 1.7E-6 T 12-10-2018 BAMF_3677 9d31d6e38c5d5c20100da917d3fc50ef 582 Gene3D G3DSA:1.10.10.1270 427 483 5.5E-7 T 12-10-2018 BAMF_3677 9d31d6e38c5d5c20100da917d3fc50ef 582 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 322 332 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BAMF_3677 9d31d6e38c5d5c20100da917d3fc50ef 582 SUPERFAMILY SSF54897 32 91 4.51E-8 T 12-10-2018 BAMF_3677 9d31d6e38c5d5c20100da917d3fc50ef 582 Pfam PF00082 Subtilase family 131 372 3.9E-53 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BAMF_3677 9d31d6e38c5d5c20100da917d3fc50ef 582 Gene3D G3DSA:3.40.50.200 91 381 2.0E-88 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BAMF_3677 9d31d6e38c5d5c20100da917d3fc50ef 582 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 170 180 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BAMF_3677 9d31d6e38c5d5c20100da917d3fc50ef 582 Gene3D G3DSA:3.30.70.80 25 90 3.3E-12 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BAMF_3677 9d31d6e38c5d5c20100da917d3fc50ef 582 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 136 147 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BAMF_3586 1baef6fc1361c86474b2478fc838af50 256 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 3 79 5.3E-44 T 12-10-2018 IPR014243 Transcription factor, RsfA BAMF_0984 84b3a48de1a63876479c1b58a2f0f9b8 89 SUPERFAMILY SSF57716 2 89 4.99E-32 T 12-10-2018 BAMF_0984 84b3a48de1a63876479c1b58a2f0f9b8 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 7.6E-29 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0984 84b3a48de1a63876479c1b58a2f0f9b8 89 Gene3D G3DSA:4.10.830.10 28 89 5.2E-26 T 12-10-2018 BAMF_0984 84b3a48de1a63876479c1b58a2f0f9b8 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 51 73 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0984 84b3a48de1a63876479c1b58a2f0f9b8 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 25.106 T 12-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid BAMF_2765 3bfbd9242bd49dfa03282e87b01ab775 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 104 7.0E-22 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD BAMF_2923 bb7265bda58f8a65002bc11ca1da75bd 661 Gene3D G3DSA:3.30.450.20 60 264 1.4E-38 T 12-10-2018 BAMF_2923 bb7265bda58f8a65002bc11ca1da75bd 661 SMART SM00304 303 355 1.9E-15 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_2923 bb7265bda58f8a65002bc11ca1da75bd 661 SUPERFAMILY SSF58104 323 659 8.5E-72 T 12-10-2018 BAMF_2923 bb7265bda58f8a65002bc11ca1da75bd 661 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 612 5.2E-56 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_2923 bb7265bda58f8a65002bc11ca1da75bd 661 Gene3D G3DSA:1.10.8.500 302 352 1.5E-8 T 12-10-2018 BAMF_2923 bb7265bda58f8a65002bc11ca1da75bd 661 Pfam PF00672 HAMP domain 303 351 5.0E-14 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_2923 bb7265bda58f8a65002bc11ca1da75bd 661 Pfam PF02743 Cache domain 48 263 4.4E-26 T 12-10-2018 IPR033479 Double Cache domain 1 BAMF_2923 bb7265bda58f8a65002bc11ca1da75bd 661 Gene3D G3DSA:1.10.287.950 353 659 7.3E-71 T 12-10-2018 BAMF_2923 bb7265bda58f8a65002bc11ca1da75bd 661 Gene3D G3DSA:3.30.450.20 72 183 1.4E-38 T 12-10-2018 BAMF_2923 bb7265bda58f8a65002bc11ca1da75bd 661 SMART SM00283 384 659 6.1E-93 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_2923 bb7265bda58f8a65002bc11ca1da75bd 661 SUPERFAMILY SSF103190 98 194 7.38E-12 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BAMF_2923 bb7265bda58f8a65002bc11ca1da75bd 661 SMART SM00319 33 151 1.4E-29 T 12-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 BAMF_0761 28e4251c19511f07f5a9af79fc5f5600 279 PIRSF PIRSF035875 1 277 2.0E-80 T 12-10-2018 IPR017039 Virulence factor BrkB BAMF_0761 28e4251c19511f07f5a9af79fc5f5600 279 Pfam PF03631 Virulence factor BrkB 14 265 3.7E-70 T 12-10-2018 IPR017039 Virulence factor BrkB BAMF_0761 28e4251c19511f07f5a9af79fc5f5600 279 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 2 264 4.7E-81 T 12-10-2018 IPR017039 Virulence factor BrkB BAMF_3808 7775609ff799d01d26af81b2c95806f3 450 Pfam PF00324 Amino acid permease 14 448 9.7E-105 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BAMF_3808 7775609ff799d01d26af81b2c95806f3 450 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BAMF_3808 7775609ff799d01d26af81b2c95806f3 450 Gene3D G3DSA:1.20.1740.10 5 450 1.4E-62 T 12-10-2018 BAMF_3808 7775609ff799d01d26af81b2c95806f3 450 PIRSF PIRSF006060 1 449 5.1E-70 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_2355 46594c09c8daf13e4a71b08d2611dca8 142 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 1 60 8.0E-27 T 12-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 BAMF_2355 46594c09c8daf13e4a71b08d2611dca8 142 Gene3D G3DSA:1.10.60.10 74 141 7.5E-35 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 BAMF_2355 46594c09c8daf13e4a71b08d2611dca8 142 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 63 126 1.3E-18 T 12-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 BAMF_2355 46594c09c8daf13e4a71b08d2611dca8 142 SMART SM00529 24 123 4.1E-46 T 12-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 BAMF_2355 46594c09c8daf13e4a71b08d2611dca8 142 Gene3D G3DSA:1.10.10.10 1 73 3.0E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2355 46594c09c8daf13e4a71b08d2611dca8 142 SUPERFAMILY SSF46785 3 62 2.93E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2355 46594c09c8daf13e4a71b08d2611dca8 142 SUPERFAMILY SSF47979 63 133 4.32E-19 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 BAMF_2355 46594c09c8daf13e4a71b08d2611dca8 142 Hamap MF_00732 Transcriptional regulator MntR [mntR]. 1 139 45.06 T 12-10-2018 IPR022897 HTH-type transcription regulator MntR BAMF_1050 ccb41f247e84cb669a3b923ad1845e01 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 234 258 6.2E-11 T 12-10-2018 BAMF_1050 ccb41f247e84cb669a3b923ad1845e01 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 99 119 6.2E-11 T 12-10-2018 BAMF_1050 ccb41f247e84cb669a3b923ad1845e01 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 166 190 6.2E-11 T 12-10-2018 BAMF_1050 ccb41f247e84cb669a3b923ad1845e01 394 SUPERFAMILY SSF53383 18 390 7.98E-81 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_1050 ccb41f247e84cb669a3b923ad1845e01 394 Gene3D G3DSA:3.90.1150.10 19 376 4.9E-115 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1050 ccb41f247e84cb669a3b923ad1845e01 394 Pfam PF00155 Aminotransferase class I and II 38 379 1.0E-53 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_1050 ccb41f247e84cb669a3b923ad1845e01 394 Gene3D G3DSA:3.40.640.10 69 298 4.9E-115 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_1050 ccb41f247e84cb669a3b923ad1845e01 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 240 253 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BAMF_2994 edfb2e70a061f3b24099035dd309ee80 541 Gene3D G3DSA:3.40.50.980 182 353 8.6E-61 T 12-10-2018 BAMF_2994 edfb2e70a061f3b24099035dd309ee80 541 Gene3D G3DSA:3.40.50.980 22 179 3.1E-58 T 12-10-2018 BAMF_2994 edfb2e70a061f3b24099035dd309ee80 541 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 4 526 2.8E-259 T 12-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 BAMF_2994 edfb2e70a061f3b24099035dd309ee80 541 Pfam PF00501 AMP-binding enzyme 32 435 7.2E-86 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_2994 edfb2e70a061f3b24099035dd309ee80 541 SUPERFAMILY SSF56801 8 531 1.57E-141 T 12-10-2018 BAMF_2994 edfb2e70a061f3b24099035dd309ee80 541 Gene3D G3DSA:3.30.300.310 431 534 2.5E-32 T 12-10-2018 BAMF_2994 edfb2e70a061f3b24099035dd309ee80 541 Gene3D G3DSA:2.30.38.10 354 429 3.6E-32 T 12-10-2018 BAMF_2994 edfb2e70a061f3b24099035dd309ee80 541 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_2994 edfb2e70a061f3b24099035dd309ee80 541 Pfam PF13193 AMP-binding enzyme C-terminal domain 444 519 2.4E-15 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_2011 e311a5c7323064ec3940c6b79dba8e89 296 SMART SM00382 56 202 0.0017 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2011 e311a5c7323064ec3940c6b79dba8e89 296 Pfam PF07728 AAA domain (dynein-related subfamily) 59 196 2.7E-29 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 BAMF_2011 e311a5c7323064ec3940c6b79dba8e89 296 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 132 150 2.5E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BAMF_2011 e311a5c7323064ec3940c6b79dba8e89 296 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 60 78 2.5E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BAMF_2011 e311a5c7323064ec3940c6b79dba8e89 296 Gene3D G3DSA:3.40.50.300 42 213 1.1E-34 T 12-10-2018 BAMF_2011 e311a5c7323064ec3940c6b79dba8e89 296 SUPERFAMILY SSF52540 45 279 6.68E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1176 d94d00883b49d19e89fde3513516b40a 163 Gene3D G3DSA:3.30.70.860 6 163 1.6E-61 T 12-10-2018 IPR035571 UPF0234-like, C-terminal BAMF_1176 d94d00883b49d19e89fde3513516b40a 163 SUPERFAMILY SSF89963 6 90 8.63E-29 T 12-10-2018 IPR036183 YajQ-like superfamily BAMF_1176 d94d00883b49d19e89fde3513516b40a 163 SUPERFAMILY SSF89963 92 163 3.66E-26 T 12-10-2018 IPR036183 YajQ-like superfamily BAMF_1176 d94d00883b49d19e89fde3513516b40a 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 163 26.16 T 12-10-2018 IPR007551 Protein of unknown function DUF520 BAMF_1176 d94d00883b49d19e89fde3513516b40a 163 Pfam PF04461 Protein of unknown function (DUF520) 5 163 1.2E-61 T 12-10-2018 IPR007551 Protein of unknown function DUF520 BAMF_1176 d94d00883b49d19e89fde3513516b40a 163 Gene3D G3DSA:3.30.70.990 12 101 1.6E-61 T 12-10-2018 IPR035570 UPF0234, N-terminal BAMF_3268 d6064ac4e21c358871686e96d68cad0d 476 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BAMF_3268 d6064ac4e21c358871686e96d68cad0d 476 Pfam PF13183 4Fe-4S dicluster domain 311 377 2.2E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BAMF_3268 d6064ac4e21c358871686e96d68cad0d 476 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 455 4.1E-222 T 12-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 BAMF_3268 d6064ac4e21c358871686e96d68cad0d 476 Pfam PF02589 LUD domain 70 295 1.3E-57 T 12-10-2018 IPR003741 LUD domain BAMF_3268 d6064ac4e21c358871686e96d68cad0d 476 SUPERFAMILY SSF100950 65 296 2.34E-40 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BAMF_3268 d6064ac4e21c358871686e96d68cad0d 476 SUPERFAMILY SSF46548 272 392 1.17E-15 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BAMF_3268 d6064ac4e21c358871686e96d68cad0d 476 Hamap MF_02103 Lactate utilization protein B [lutB]. 1 475 68.986 T 12-10-2018 IPR022825 Lactate utilization protein B BAMF_3268 d6064ac4e21c358871686e96d68cad0d 476 Pfam PF11870 Domain of unknown function (DUF3390) 385 470 4.6E-21 T 12-10-2018 IPR024569 4Fe-4S binding protein, C-terminal BAMF_3268 d6064ac4e21c358871686e96d68cad0d 476 Gene3D G3DSA:3.40.50.10420 122 295 1.9E-15 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BAMF_3219 9af3d3af15438d2a35b4ce4439e1ba2f 76 Gene3D G3DSA:1.10.260.40 3 69 7.4E-8 T 12-10-2018 BAMF_3219 9af3d3af15438d2a35b4ce4439e1ba2f 76 Pfam PF01381 Helix-turn-helix 15 65 1.2E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_3219 9af3d3af15438d2a35b4ce4439e1ba2f 76 SMART SM00530 11 66 1.6E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_3219 9af3d3af15438d2a35b4ce4439e1ba2f 76 SUPERFAMILY SSF47413 11 70 1.39E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_3028 6bde16457d59ceb0d5b67d039fa6b98c 309 PRINTS PR00958 Homoserine kinase signature 97 112 2.9E-39 T 12-10-2018 BAMF_3028 6bde16457d59ceb0d5b67d039fa6b98c 309 PRINTS PR00958 Homoserine kinase signature 131 144 2.9E-39 T 12-10-2018 BAMF_3028 6bde16457d59ceb0d5b67d039fa6b98c 309 PRINTS PR00958 Homoserine kinase signature 169 186 2.9E-39 T 12-10-2018 BAMF_3028 6bde16457d59ceb0d5b67d039fa6b98c 309 PRINTS PR00958 Homoserine kinase signature 15 30 2.9E-39 T 12-10-2018 BAMF_3028 6bde16457d59ceb0d5b67d039fa6b98c 309 PRINTS PR00958 Homoserine kinase signature 249 264 2.9E-39 T 12-10-2018 BAMF_3028 6bde16457d59ceb0d5b67d039fa6b98c 309 Pfam PF08544 GHMP kinases C terminal 205 282 1.1E-9 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain BAMF_3028 6bde16457d59ceb0d5b67d039fa6b98c 309 TIGRFAM TIGR00191 thrB: homoserine kinase 8 305 2.5E-101 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BAMF_3028 6bde16457d59ceb0d5b67d039fa6b98c 309 Gene3D G3DSA:3.30.230.10 6 165 2.3E-43 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BAMF_3028 6bde16457d59ceb0d5b67d039fa6b98c 309 SUPERFAMILY SSF54211 4 159 1.59E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_3028 6bde16457d59ceb0d5b67d039fa6b98c 309 Pfam PF00288 GHMP kinases N terminal domain 83 144 2.5E-13 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BAMF_3028 6bde16457d59ceb0d5b67d039fa6b98c 309 PIRSF PIRSF000676 4 301 9.6E-93 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BAMF_3028 6bde16457d59ceb0d5b67d039fa6b98c 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 BAMF_3028 6bde16457d59ceb0d5b67d039fa6b98c 309 Gene3D G3DSA:3.30.70.890 166 288 1.8E-36 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BAMF_3028 6bde16457d59ceb0d5b67d039fa6b98c 309 SUPERFAMILY SSF55060 164 285 2.16E-33 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BAMF_3028 6bde16457d59ceb0d5b67d039fa6b98c 309 Hamap MF_00384 Homoserine kinase [thrB]. 10 299 29.498 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BAMF_0809 c815c074f6b6c0d0c05d85bc51db0107 299 SUPERFAMILY SSF51735 1 274 7.72E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0809 c815c074f6b6c0d0c05d85bc51db0107 299 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 216 4.1E-19 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BAMF_0809 c815c074f6b6c0d0c05d85bc51db0107 299 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 4.7E-107 T 12-10-2018 IPR010099 Epimerase family protein SDR39U1 BAMF_0809 c815c074f6b6c0d0c05d85bc51db0107 299 Gene3D G3DSA:3.40.50.720 1 287 9.4E-74 T 12-10-2018 BAMF_0809 c815c074f6b6c0d0c05d85bc51db0107 299 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 1.2E-15 T 12-10-2018 IPR013549 Domain of unknown function DUF1731 BAMF_2398 f3a4f9a03f4d56575f1a770ff7cd2279 300 Pfam PF12849 PBP superfamily domain 36 271 4.4E-43 T 12-10-2018 IPR024370 PBP domain BAMF_2398 f3a4f9a03f4d56575f1a770ff7cd2279 300 SUPERFAMILY SSF53850 46 294 1.15E-73 T 12-10-2018 BAMF_2398 f3a4f9a03f4d56575f1a770ff7cd2279 300 Gene3D G3DSA:3.40.190.10 48 286 2.0E-86 T 12-10-2018 BAMF_2398 f3a4f9a03f4d56575f1a770ff7cd2279 300 Gene3D G3DSA:3.40.190.10 120 242 2.0E-86 T 12-10-2018 BAMF_2398 f3a4f9a03f4d56575f1a770ff7cd2279 300 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 4 286 3.2E-81 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 BAMF_1922 af8136e6526df960c6bc13bd31140d74 386 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 230 239 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 BAMF_1922 af8136e6526df960c6bc13bd31140d74 386 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 24 375 3.7E-141 T 12-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 BAMF_1922 af8136e6526df960c6bc13bd31140d74 386 Gene3D G3DSA:3.90.1150.10 40 372 1.1E-129 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1922 af8136e6526df960c6bc13bd31140d74 386 Pfam PF00155 Aminotransferase class I and II 40 374 3.2E-61 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_1922 af8136e6526df960c6bc13bd31140d74 386 Gene3D G3DSA:3.40.640.10 53 281 1.1E-129 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_1922 af8136e6526df960c6bc13bd31140d74 386 SUPERFAMILY SSF53383 9 383 3.36E-101 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_1887 d9804399411b8198951180dfc627a6c9 169 Pfam PF00578 AhpC/TSA family 36 151 3.4E-29 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BAMF_1887 d9804399411b8198951180dfc627a6c9 169 SUPERFAMILY SSF52833 10 166 1.49E-39 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_1887 d9804399411b8198951180dfc627a6c9 169 Gene3D G3DSA:3.40.30.10 22 169 3.7E-46 T 12-10-2018 BAMF_2560 a044a063c02f3ded4123f95b8d4c78ea 371 Pfam PF03054 tRNA methyl transferase 9 358 2.7E-150 T 12-10-2018 BAMF_2560 a044a063c02f3ded4123f95b8d4c78ea 371 Gene3D G3DSA:2.40.30.10 279 371 7.8E-27 T 12-10-2018 BAMF_2560 a044a063c02f3ded4123f95b8d4c78ea 371 Gene3D G3DSA:3.40.50.620 1 213 4.4E-98 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_2560 a044a063c02f3ded4123f95b8d4c78ea 371 Gene3D G3DSA:2.30.30.280 214 277 9.8E-25 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 BAMF_2560 a044a063c02f3ded4123f95b8d4c78ea 371 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 8 359 40.513 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 BAMF_2560 a044a063c02f3ded4123f95b8d4c78ea 371 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 9 358 4.5E-138 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 BAMF_2560 a044a063c02f3ded4123f95b8d4c78ea 371 SUPERFAMILY SSF52402 7 244 6.62E-60 T 12-10-2018 BAMF_0457 44f9ff844971f678d4ad12f4926a238d 216 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 207 25.749 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 BAMF_0457 44f9ff844971f678d4ad12f4926a238d 216 Pfam PF02525 Flavodoxin-like fold 3 205 1.8E-37 T 12-10-2018 IPR003680 Flavodoxin-like fold BAMF_0457 44f9ff844971f678d4ad12f4926a238d 216 Gene3D G3DSA:3.40.50.360 1 215 6.7E-60 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_0457 44f9ff844971f678d4ad12f4926a238d 216 SUPERFAMILY SSF52218 1 211 7.91E-42 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_2172 e425c01276299c9d52892cd50740e427 390 SUPERFAMILY SSF103263 1 388 1.02E-148 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BAMF_2172 e425c01276299c9d52892cd50740e427 390 ProSitePatterns PS00789 Chorismate synthase signature 3. 339 355 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BAMF_2172 e425c01276299c9d52892cd50740e427 390 TIGRFAM TIGR00033 aroC: chorismate synthase 1 369 4.9E-128 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BAMF_2172 e425c01276299c9d52892cd50740e427 390 Hamap MF_00300 Chorismate synthase [aroC]. 1 372 36.399 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BAMF_2172 e425c01276299c9d52892cd50740e427 390 Pfam PF01264 Chorismate synthase 1 364 1.8E-123 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BAMF_2172 e425c01276299c9d52892cd50740e427 390 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BAMF_2172 e425c01276299c9d52892cd50740e427 390 ProSitePatterns PS00788 Chorismate synthase signature 2. 131 147 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BAMF_2172 e425c01276299c9d52892cd50740e427 390 PIRSF PIRSF001456 1 384 1.8E-131 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BAMF_2172 e425c01276299c9d52892cd50740e427 390 Gene3D G3DSA:3.60.150.10 1 389 7.1E-155 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BAMF_1245 336ad5cc6d1e725b141bda98300b5a76 270 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 260 1.4E-98 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_1245 336ad5cc6d1e725b141bda98300b5a76 270 Pfam PF08543 Phosphomethylpyrimidine kinase 13 258 1.1E-92 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BAMF_1245 336ad5cc6d1e725b141bda98300b5a76 270 Gene3D G3DSA:3.40.1190.20 1 269 3.3E-100 T 12-10-2018 IPR029056 Ribokinase-like BAMF_1245 336ad5cc6d1e725b141bda98300b5a76 270 SUPERFAMILY SSF53613 4 262 1.54E-79 T 12-10-2018 IPR029056 Ribokinase-like BAMF_3751 2cdc969decffa2ebc17334aceb7b47c2 597 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 9 25 9.4E-9 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BAMF_3751 2cdc969decffa2ebc17334aceb7b47c2 597 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 127 141 9.4E-9 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BAMF_3751 2cdc969decffa2ebc17334aceb7b47c2 597 Gene3D G3DSA:3.40.50.150 7 204 2.2E-40 T 12-10-2018 BAMF_3751 2cdc969decffa2ebc17334aceb7b47c2 597 SUPERFAMILY SSF53335 338 581 1.38E-38 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_3751 2cdc969decffa2ebc17334aceb7b47c2 597 SUPERFAMILY SSF53335 8 148 9.46E-34 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_3751 2cdc969decffa2ebc17334aceb7b47c2 597 Gene3D G3DSA:3.90.120.10 398 565 1.9E-27 T 12-10-2018 BAMF_3751 2cdc969decffa2ebc17334aceb7b47c2 597 Pfam PF00145 C-5 cytosine-specific DNA methylase 343 577 3.7E-29 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BAMF_3751 2cdc969decffa2ebc17334aceb7b47c2 597 Pfam PF00145 C-5 cytosine-specific DNA methylase 8 145 7.9E-28 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BAMF_3751 2cdc969decffa2ebc17334aceb7b47c2 597 Gene3D G3DSA:3.40.50.150 332 397 2.1E-9 T 12-10-2018 BAMF_3563 a6293c5b40bddce664f087041063663f 1228 Gene3D G3DSA:3.40.50.12440 48 1228 0.0 T 12-10-2018 BAMF_3563 a6293c5b40bddce664f087041063663f 1228 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 7 1227 0.0 T 12-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 BAMF_3563 a6293c5b40bddce664f087041063663f 1228 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 52 70 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 BAMF_3563 a6293c5b40bddce664f087041063663f 1228 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1117 1144 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 BAMF_3563 a6293c5b40bddce664f087041063663f 1228 Pfam PF01568 Molydopterin dinucleotide binding domain 1080 1194 6.9E-21 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BAMF_3563 a6293c5b40bddce664f087041063663f 1228 SUPERFAMILY SSF50692 1074 1226 2.17E-44 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BAMF_3563 a6293c5b40bddce664f087041063663f 1228 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 9 44 3.9E-14 T 12-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 BAMF_3563 a6293c5b40bddce664f087041063663f 1228 SUPERFAMILY SSF53706 8 1065 0.0 T 12-10-2018 BAMF_3563 a6293c5b40bddce664f087041063663f 1228 SMART SM00926 47 109 6.0E-7 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_3563 a6293c5b40bddce664f087041063663f 1228 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 768 785 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 BAMF_3563 a6293c5b40bddce664f087041063663f 1228 Pfam PF00384 Molybdopterin oxidoreductase 112 824 2.1E-186 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_0458 e671e0f59ca503bb8bec75c78ba42684 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.8E-31 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BAMF_0458 e671e0f59ca503bb8bec75c78ba42684 66 Gene3D G3DSA:2.40.50.140 1 66 4.4E-30 T 12-10-2018 BAMF_0458 e671e0f59ca503bb8bec75c78ba42684 66 PRINTS PR00050 Cold shock protein signature 4 19 2.5E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BAMF_0458 e671e0f59ca503bb8bec75c78ba42684 66 PRINTS PR00050 Cold shock protein signature 24 33 2.5E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BAMF_0458 e671e0f59ca503bb8bec75c78ba42684 66 PRINTS PR00050 Cold shock protein signature 39 57 2.5E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BAMF_0458 e671e0f59ca503bb8bec75c78ba42684 66 SUPERFAMILY SSF50249 1 64 3.6E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_0458 e671e0f59ca503bb8bec75c78ba42684 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 12-10-2018 IPR019844 Cold-shock conserved site BAMF_0458 e671e0f59ca503bb8bec75c78ba42684 66 PIRSF PIRSF002599 1 66 9.1E-25 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 BAMF_0458 e671e0f59ca503bb8bec75c78ba42684 66 SMART SM00357 3 66 2.4E-32 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 Pfam PF12838 4Fe-4S dicluster domain 147 205 3.6E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 Gene3D G3DSA:3.30.70.20 126 209 3.7E-21 T 12-10-2018 BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 SUPERFAMILY SSF54292 6 74 6.58E-15 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 Pfam PF00384 Molybdopterin oxidoreductase 315 710 1.8E-64 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 Gene3D G3DSA:2.20.25.90 258 313 1.3E-19 T 12-10-2018 BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 Gene3D G3DSA:3.10.20.740 4 125 1.3E-27 T 12-10-2018 BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 Gene3D G3DSA:3.40.228.10 393 592 4.0E-141 T 12-10-2018 BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 191 202 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 SUPERFAMILY SSF53706 252 710 5.23E-174 T 12-10-2018 BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 6 75 1.1E-11 T 12-10-2018 BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 SMART SM00929 84 125 5.9E-10 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 SMART SM00926 258 312 9.2E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 258 312 1.6E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 Gene3D G3DSA:3.40.50.740 320 710 4.0E-141 T 12-10-2018 BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 123 1.7E-8 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_1305 e87e8b7ad4ba4d3e65e3044492e92c3e 781 SUPERFAMILY SSF54862 77 211 9.63E-30 T 12-10-2018 BAMF_3912 35cf447f4b9bc436834efd6c6489f0a9 204 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 42 181 1.8E-69 T 12-10-2018 IPR009665 Protein of unknown function DUF1256 BAMF_3912 35cf447f4b9bc436834efd6c6489f0a9 204 Pfam PF06866 Protein of unknown function (DUF1256) 17 179 5.8E-67 T 12-10-2018 IPR009665 Protein of unknown function DUF1256 BAMF_3912 35cf447f4b9bc436834efd6c6489f0a9 204 SUPERFAMILY SSF53163 13 194 4.71E-56 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 Pfam PF00391 PEP-utilising enzyme, mobile domain 153 225 5.8E-23 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 540 2.2E-129 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 Gene3D G3DSA:3.20.20.60 236 569 2.0E-126 T 12-10-2018 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 Gene3D G3DSA:1.10.274.10 23 146 1.8E-79 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 Gene3D G3DSA:3.50.30.10 6 235 1.8E-79 T 12-10-2018 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 SUPERFAMILY SSF47831 23 143 4.84E-36 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 PIRSF PIRSF000732 1 571 1.8E-226 T 12-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 1.8E-32 T 12-10-2018 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 1.8E-32 T 12-10-2018 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 1.8E-32 T 12-10-2018 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 1.8E-32 T 12-10-2018 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 Pfam PF05524 PEP-utilising enzyme, N-terminal 5 126 2.0E-33 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 4 566 1.9E-273 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 SUPERFAMILY SSF52009 125 246 2.09E-36 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BAMF_1468 cbc5a84d87fab6da099001000780a6fb 571 SUPERFAMILY SSF51621 249 547 6.54E-113 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BAMF_2756 c21cd1108c41ab45dd7a19a003094218 160 Pfam PF13185 GAF domain 53 155 9.7E-12 T 12-10-2018 IPR003018 GAF domain GO:0005515 BAMF_2756 c21cd1108c41ab45dd7a19a003094218 160 Gene3D G3DSA:3.30.450.40 10 160 2.3E-66 T 12-10-2018 IPR029016 GAF-like domain superfamily BAMF_2756 c21cd1108c41ab45dd7a19a003094218 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 12-10-2018 IPR000614 Free Met sulfoxide reductase conserved site BAMF_2756 c21cd1108c41ab45dd7a19a003094218 160 SUPERFAMILY SSF55781 8 155 1.72E-42 T 12-10-2018 BAMF_1812 61b7e5965c132e235e3c913cd548b89f 420 PIRSF PIRSF006809 2 420 5.0E-143 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 BAMF_1812 61b7e5965c132e235e3c913cd548b89f 420 Gene3D G3DSA:3.40.50.300 202 374 1.0E-28 T 12-10-2018 BAMF_1812 61b7e5965c132e235e3c913cd548b89f 420 Pfam PF01926 50S ribosome-binding GTPase 203 321 3.4E-18 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_1812 61b7e5965c132e235e3c913cd548b89f 420 Pfam PF16360 GTP-binding GTPase Middle Region 117 195 1.0E-30 T 12-10-2018 IPR032305 GTP-binding protein, middle domain BAMF_1812 61b7e5965c132e235e3c913cd548b89f 420 SUPERFAMILY SSF52540 201 362 7.41E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1812 61b7e5965c132e235e3c913cd548b89f 420 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 358 4.6E-142 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 BAMF_1812 61b7e5965c132e235e3c913cd548b89f 420 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 270 288 1.6E-8 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_1812 61b7e5965c132e235e3c913cd548b89f 420 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 203 223 1.6E-8 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_1812 61b7e5965c132e235e3c913cd548b89f 420 Hamap MF_00900 GTPase HflX [hflX]. 30 389 47.608 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 BAMF_1812 61b7e5965c132e235e3c913cd548b89f 420 Pfam PF13167 GTP-binding GTPase N-terminal 28 115 1.1E-33 T 12-10-2018 IPR025121 GTPase HflX, N-terminal BAMF_1812 61b7e5965c132e235e3c913cd548b89f 420 Gene3D G3DSA:3.40.50.11060 20 141 1.7E-41 T 12-10-2018 BAMF_1594 dc6d308529967aca375dbd5b2de10acf 451 Gene3D G3DSA:3.90.190.20 316 449 3.1E-41 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BAMF_1594 dc6d308529967aca375dbd5b2de10acf 451 Gene3D G3DSA:3.40.50.720 10 96 2.8E-26 T 12-10-2018 BAMF_1594 dc6d308529967aca375dbd5b2de10acf 451 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 448 1.1E-149 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_1594 dc6d308529967aca375dbd5b2de10acf 451 Pfam PF08245 Mur ligase middle domain 118 292 8.4E-30 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BAMF_1594 dc6d308529967aca375dbd5b2de10acf 451 SUPERFAMILY SSF53244 311 450 1.28E-41 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BAMF_1594 dc6d308529967aca375dbd5b2de10acf 451 SUPERFAMILY SSF53623 104 309 1.48E-51 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BAMF_1594 dc6d308529967aca375dbd5b2de10acf 451 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 450 36.034 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_1594 dc6d308529967aca375dbd5b2de10acf 451 Gene3D G3DSA:3.40.1190.10 103 309 1.6E-60 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BAMF_1594 dc6d308529967aca375dbd5b2de10acf 451 SUPERFAMILY SSF51984 10 101 5.62E-16 T 12-10-2018 BAMF_1594 dc6d308529967aca375dbd5b2de10acf 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 375 2.8E-8 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BAMF_3411 5fa0b390ccffc26a9cb98efe681e1657 721 Gene3D G3DSA:3.40.50.11820 351 712 6.5E-146 T 12-10-2018 BAMF_3411 5fa0b390ccffc26a9cb98efe681e1657 721 SUPERFAMILY SSF53756 463 717 3.3E-11 T 12-10-2018 BAMF_3411 5fa0b390ccffc26a9cb98efe681e1657 721 Gene3D G3DSA:3.40.50.12580 523 705 6.5E-146 T 12-10-2018 BAMF_3411 5fa0b390ccffc26a9cb98efe681e1657 721 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 345 719 1.3E-135 T 12-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 BAMF_2575 b56ecd932966f5c7b545887befedd320 739 PRINTS PR01755 Bacterial translocase SecF protein signature 474 489 1.0E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BAMF_2575 b56ecd932966f5c7b545887befedd320 739 PRINTS PR01755 Bacterial translocase SecF protein signature 584 598 1.0E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BAMF_2575 b56ecd932966f5c7b545887befedd320 739 PRINTS PR01755 Bacterial translocase SecF protein signature 632 650 1.0E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BAMF_2575 b56ecd932966f5c7b545887befedd320 739 PRINTS PR01755 Bacterial translocase SecF protein signature 667 682 1.0E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BAMF_2575 b56ecd932966f5c7b545887befedd320 739 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 476 719 8.9E-69 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BAMF_2575 b56ecd932966f5c7b545887befedd320 739 SUPERFAMILY SSF82866 550 732 4.84E-36 T 12-10-2018 BAMF_2575 b56ecd932966f5c7b545887befedd320 739 Gene3D G3DSA:1.20.1640.10 249 421 1.6E-17 T 12-10-2018 BAMF_2575 b56ecd932966f5c7b545887befedd320 739 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 447 730 24.992 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BAMF_2575 b56ecd932966f5c7b545887befedd320 739 Gene3D G3DSA:3.30.70.3400 33 121 8.3E-21 T 12-10-2018 BAMF_2575 b56ecd932966f5c7b545887befedd320 739 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 554 716 1.9E-50 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BAMF_2575 b56ecd932966f5c7b545887befedd320 739 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 179 398 9.0E-60 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BAMF_2575 b56ecd932966f5c7b545887befedd320 739 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 33 405 4.9E-119 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BAMF_2575 b56ecd932966f5c7b545887befedd320 739 Pfam PF07549 SecD/SecF GG Motif 469 492 5.5E-5 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BAMF_2575 b56ecd932966f5c7b545887befedd320 739 Pfam PF02355 Protein export membrane protein 241 408 2.6E-15 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BAMF_2575 b56ecd932966f5c7b545887befedd320 739 Pfam PF02355 Protein export membrane protein 551 727 1.8E-65 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BAMF_2575 b56ecd932966f5c7b545887befedd320 739 Gene3D G3DSA:1.20.1640.10 425 473 1.6E-17 T 12-10-2018 BAMF_2575 b56ecd932966f5c7b545887befedd320 739 Gene3D G3DSA:1.20.1640.10 529 736 2.3E-7 T 12-10-2018 BAMF_2575 b56ecd932966f5c7b545887befedd320 739 SUPERFAMILY SSF82866 215 413 2.88E-42 T 12-10-2018 BAMF_2575 b56ecd932966f5c7b545887befedd320 739 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 420 33.995 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BAMF_3794 cf8c87d2b4b24e468c3449aa1194d274 199 SMART SM00421 135 192 6.8E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3794 cf8c87d2b4b24e468c3449aa1194d274 199 SUPERFAMILY SSF52172 1 129 1.17E-29 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_3794 cf8c87d2b4b24e468c3449aa1194d274 199 Pfam PF00072 Response regulator receiver domain 4 114 1.3E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3794 cf8c87d2b4b24e468c3449aa1194d274 199 Gene3D G3DSA:3.40.50.12740 2 197 2.3E-59 T 12-10-2018 BAMF_3794 cf8c87d2b4b24e468c3449aa1194d274 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 7.7E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3794 cf8c87d2b4b24e468c3449aa1194d274 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 2.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3794 cf8c87d2b4b24e468c3449aa1194d274 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 2.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3794 cf8c87d2b4b24e468c3449aa1194d274 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 2.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3794 cf8c87d2b4b24e468c3449aa1194d274 199 SUPERFAMILY SSF46894 122 198 2.89E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_3794 cf8c87d2b4b24e468c3449aa1194d274 199 SMART SM00448 2 113 7.4E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0501 fda36b6cd9f4c8f732c020e63e5cc5c9 279 SMART SM00530 13 85 2.2E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_0501 fda36b6cd9f4c8f732c020e63e5cc5c9 279 Gene3D G3DSA:1.10.260.40 14 86 3.8E-7 T 12-10-2018 BAMF_0501 fda36b6cd9f4c8f732c020e63e5cc5c9 279 SUPERFAMILY SSF47413 27 84 1.41E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_0501 fda36b6cd9f4c8f732c020e63e5cc5c9 279 Pfam PF13560 Helix-turn-helix domain 32 88 4.9E-16 T 12-10-2018 BAMF_0501 fda36b6cd9f4c8f732c020e63e5cc5c9 279 Gene3D G3DSA:3.30.450.180 110 278 6.4E-21 T 12-10-2018 BAMF_2032 217301632a46d782d219656920a2762c 480 Pfam PF00232 Glycosyl hydrolase family 1 3 476 1.9E-133 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_2032 217301632a46d782d219656920a2762c 480 SUPERFAMILY SSF51445 2 473 3.21E-163 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_2032 217301632a46d782d219656920a2762c 480 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BAMF_2032 217301632a46d782d219656920a2762c 480 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 373 381 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site BAMF_2032 217301632a46d782d219656920a2762c 480 Gene3D G3DSA:3.20.20.80 2 478 2.0E-162 T 12-10-2018 BAMF_2032 217301632a46d782d219656920a2762c 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 405 3.4E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_2032 217301632a46d782d219656920a2762c 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 441 453 3.4E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_2032 217301632a46d782d219656920a2762c 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 3.4E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_2032 217301632a46d782d219656920a2762c 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 381 3.4E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_2032 217301632a46d782d219656920a2762c 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 3.4E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_1291 aefbe501160f86c8bc8861ca7710fdb0 157 SUPERFAMILY SSF46785 6 148 9.93E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1291 aefbe501160f86c8bc8861ca7710fdb0 157 SMART SM00347 28 129 1.3E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1291 aefbe501160f86c8bc8861ca7710fdb0 157 Gene3D G3DSA:1.10.10.10 1 146 3.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1291 aefbe501160f86c8bc8861ca7710fdb0 157 Pfam PF01047 MarR family 35 91 1.1E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1291 aefbe501160f86c8bc8861ca7710fdb0 157 ProSitePatterns PS01117 MarR-type HTH domain signature. 65 99 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BAMF_0589 c14547b022ac542ac9e6f98b9f42eabf 170 TIGRFAM TIGR02126 phgtail_TP901_1: phage major tail protein, TP901-1 family 5 134 6.8E-31 T 12-10-2018 IPR011855 Phage major tail protein TP901-1 BAMF_0589 c14547b022ac542ac9e6f98b9f42eabf 170 Pfam PF06199 Phage tail tube protein 5 135 5.3E-22 T 12-10-2018 IPR011855 Phage major tail protein TP901-1 BAMF_2425 8743a48cb0a758503121342039b6d20c 255 Hamap MF_00201 DNA repair protein RecO [recO]. 1 243 29.957 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BAMF_2425 8743a48cb0a758503121342039b6d20c 255 SUPERFAMILY SSF57863 81 231 8.63E-47 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger BAMF_2425 8743a48cb0a758503121342039b6d20c 255 SUPERFAMILY SSF50249 1 75 1.88E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_2425 8743a48cb0a758503121342039b6d20c 255 TIGRFAM TIGR00613 reco: DNA repair protein RecO 3 243 5.3E-85 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BAMF_2425 8743a48cb0a758503121342039b6d20c 255 Gene3D G3DSA:1.20.1440.120 88 225 3.4E-19 T 12-10-2018 BAMF_2425 8743a48cb0a758503121342039b6d20c 255 Pfam PF11967 Recombination protein O N terminal 1 76 1.2E-25 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal BAMF_2425 8743a48cb0a758503121342039b6d20c 255 Gene3D G3DSA:3.30.60.100 146 185 3.4E-19 T 12-10-2018 BAMF_2425 8743a48cb0a758503121342039b6d20c 255 Gene3D G3DSA:2.40.50.140 3 76 9.1E-15 T 12-10-2018 BAMF_2425 8743a48cb0a758503121342039b6d20c 255 Pfam PF02565 Recombination protein O C terminal 82 238 2.4E-41 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BAMF_1630 f465eaf307f609b33f3ffd2c0c765bce 382 Pfam PF01747 ATP-sulfurylase 161 371 3.6E-94 T 12-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BAMF_1630 f465eaf307f609b33f3ffd2c0c765bce 382 Pfam PF14306 PUA-like domain 4 153 4.3E-49 T 12-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BAMF_1630 f465eaf307f609b33f3ffd2c0c765bce 382 Gene3D G3DSA:3.40.50.620 161 373 1.6E-96 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_1630 f465eaf307f609b33f3ffd2c0c765bce 382 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 5 371 5.3E-147 T 12-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BAMF_1630 f465eaf307f609b33f3ffd2c0c765bce 382 Gene3D G3DSA:3.10.400.10 3 153 8.4E-46 T 12-10-2018 BAMF_1630 f465eaf307f609b33f3ffd2c0c765bce 382 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 20 375 52.945 T 12-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BAMF_1630 f465eaf307f609b33f3ffd2c0c765bce 382 SUPERFAMILY SSF88697 4 156 3.68E-47 T 12-10-2018 IPR015947 PUA-like superfamily BAMF_1630 f465eaf307f609b33f3ffd2c0c765bce 382 SUPERFAMILY SSF52374 159 371 1.66E-85 T 12-10-2018 BAMF_1714 8b9efef936ffa69ba331c4bafd596166 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 343 35.487 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BAMF_1714 8b9efef936ffa69ba331c4bafd596166 349 Pfam PF01339 CheB methylesterase 166 329 3.2E-52 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BAMF_1714 8b9efef936ffa69ba331c4bafd596166 349 Gene3D G3DSA:3.40.50.2300 1 135 2.5E-34 T 12-10-2018 BAMF_1714 8b9efef936ffa69ba331c4bafd596166 349 SUPERFAMILY SSF52738 162 329 3.14E-56 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal BAMF_1714 8b9efef936ffa69ba331c4bafd596166 349 SMART SM00448 2 125 1.0E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_1714 8b9efef936ffa69ba331c4bafd596166 349 PIRSF PIRSF000876 1 336 2.8E-127 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BAMF_1714 8b9efef936ffa69ba331c4bafd596166 349 Gene3D G3DSA:3.40.50.180 158 336 1.1E-60 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal BAMF_1714 8b9efef936ffa69ba331c4bafd596166 349 SUPERFAMILY SSF52172 2 109 3.27E-30 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_1714 8b9efef936ffa69ba331c4bafd596166 349 Pfam PF00072 Response regulator receiver domain 4 109 6.1E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2117 d3b0ae39efd2baff02836c80c519f907 382 Pfam PF01170 Putative RNA methylase family UPF0020 164 368 1.4E-67 T 12-10-2018 IPR000241 Putative RNA methylase domain BAMF_2117 d3b0ae39efd2baff02836c80c519f907 382 SMART SM00981 57 156 7.3E-10 T 12-10-2018 IPR004114 THUMP domain GO:0003723 BAMF_2117 d3b0ae39efd2baff02836c80c519f907 382 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 301 307 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BAMF_2117 d3b0ae39efd2baff02836c80c519f907 382 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 197 208 - T 12-10-2018 IPR000241 Putative RNA methylase domain BAMF_2117 d3b0ae39efd2baff02836c80c519f907 382 Gene3D G3DSA:3.30.2130.30 8 247 3.6E-124 T 12-10-2018 BAMF_2117 d3b0ae39efd2baff02836c80c519f907 382 Pfam PF02926 THUMP domain 18 155 1.6E-19 T 12-10-2018 IPR004114 THUMP domain GO:0003723 BAMF_2117 d3b0ae39efd2baff02836c80c519f907 382 SUPERFAMILY SSF53335 145 362 3.11E-39 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_2117 d3b0ae39efd2baff02836c80c519f907 382 Gene3D G3DSA:3.40.50.150 162 366 3.6E-124 T 12-10-2018 BAMF_2886 321aa41e357e397a1bcad0608fa72809 471 SUPERFAMILY SSF53474 11 262 1.36E-10 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_0877 ee9ab0abf30c642636811a8b89423735 580 SUPERFAMILY SSF90123 5 327 3.01E-81 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_0877 ee9ab0abf30c642636811a8b89423735 580 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0877 ee9ab0abf30c642636811a8b89423735 580 Gene3D G3DSA:3.40.50.300 331 580 4.6E-94 T 12-10-2018 BAMF_0877 ee9ab0abf30c642636811a8b89423735 580 SMART SM00382 367 553 8.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0877 ee9ab0abf30c642636811a8b89423735 580 Pfam PF00664 ABC transporter transmembrane region 19 289 1.6E-46 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BAMF_0877 ee9ab0abf30c642636811a8b89423735 580 Gene3D G3DSA:1.20.1560.10 3 323 5.4E-109 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_0877 ee9ab0abf30c642636811a8b89423735 580 Pfam PF00005 ABC transporter 358 507 1.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0877 ee9ab0abf30c642636811a8b89423735 580 SUPERFAMILY SSF52540 331 577 2.0E-96 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3136 4fe58b5ca6e77d457850c49275b30020 593 Gene3D G3DSA:1.20.140.70 22 169 2.9E-8 T 12-10-2018 BAMF_3136 4fe58b5ca6e77d457850c49275b30020 593 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 9 591 1.1E-200 T 12-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 BAMF_3136 4fe58b5ca6e77d457850c49275b30020 593 Gene3D G3DSA:1.10.1370.20 224 593 1.6E-115 T 12-10-2018 BAMF_3136 4fe58b5ca6e77d457850c49275b30020 593 Pfam PF08439 Oligopeptidase F 117 183 1.4E-11 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain BAMF_3136 4fe58b5ca6e77d457850c49275b30020 593 SUPERFAMILY SSF55486 8 578 9.29E-97 T 12-10-2018 BAMF_3136 4fe58b5ca6e77d457850c49275b30020 593 Pfam PF01432 Peptidase family M3 199 553 5.6E-22 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 BAMF_2151 8306bd8c9186dda253801214e8a34ed6 290 PIRSF PIRSF006483 1 284 2.6E-100 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BAMF_2151 8306bd8c9186dda253801214e8a34ed6 290 Gene3D G3DSA:3.30.70.120 193 269 1.6E-26 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BAMF_2151 8306bd8c9186dda253801214e8a34ed6 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 217 6.5E-65 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BAMF_2151 8306bd8c9186dda253801214e8a34ed6 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 222 276 3.9E-23 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 BAMF_2405 10b50a4e03559b805dc7453266755963 375 Gene3D G3DSA:3.20.20.20 1 259 1.2E-110 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BAMF_2405 10b50a4e03559b805dc7453266755963 375 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 5 355 34.876 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BAMF_2405 10b50a4e03559b805dc7453266755963 375 SUPERFAMILY SSF51717 15 214 3.22E-17 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BAMF_2405 10b50a4e03559b805dc7453266755963 375 Pfam PF04551 GcpE protein 10 351 6.6E-141 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BAMF_2405 10b50a4e03559b805dc7453266755963 375 SUPERFAMILY SSF56014 263 357 5.07E-14 T 12-10-2018 BAMF_2405 10b50a4e03559b805dc7453266755963 375 Gene3D G3DSA:3.30.413.10 261 360 3.7E-36 T 12-10-2018 BAMF_2405 10b50a4e03559b805dc7453266755963 375 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 7 350 1.6E-131 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BAMF_2405 10b50a4e03559b805dc7453266755963 375 PIRSF PIRSF004640 1 361 5.1E-157 T 12-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BAMF_3025 c412b9149e96657466fd9493007d6f01 78 Pfam PF01106 NifU-like domain 10 75 4.7E-28 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BAMF_3025 c412b9149e96657466fd9493007d6f01 78 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 14 65 1.0E-22 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BAMF_3025 c412b9149e96657466fd9493007d6f01 78 Gene3D G3DSA:3.30.300.130 1 78 2.0E-32 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BAMF_3025 c412b9149e96657466fd9493007d6f01 78 SUPERFAMILY SSF117916 2 77 9.81E-27 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BAMF_1593 2a662520b2c4c5bc4b624e1c38f372dc 324 ProSitePatterns PS01347 MraY family signature 1. 48 60 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_1593 2a662520b2c4c5bc4b624e1c38f372dc 324 Pfam PF00953 Glycosyl transferase family 4 82 248 9.4E-39 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 BAMF_1593 2a662520b2c4c5bc4b624e1c38f372dc 324 ProSitePatterns PS01348 MraY family signature 2. 168 179 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_1593 2a662520b2c4c5bc4b624e1c38f372dc 324 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 48 60 1.4E-5 T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_1593 2a662520b2c4c5bc4b624e1c38f372dc 324 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 5 322 24.637 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_1593 2a662520b2c4c5bc4b624e1c38f372dc 324 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 17 323 4.8E-129 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_2569 084fedf1514f9c495d8b1630fb9b8284 147 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 35.451 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 BAMF_2569 084fedf1514f9c495d8b1630fb9b8284 147 SUPERFAMILY SSF69500 1 145 3.01E-59 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily BAMF_2569 084fedf1514f9c495d8b1630fb9b8284 147 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 146 5.1E-67 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 BAMF_2569 084fedf1514f9c495d8b1630fb9b8284 147 Gene3D G3DSA:3.50.80.10 1 147 5.1E-60 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily BAMF_2569 084fedf1514f9c495d8b1630fb9b8284 147 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 2.2E-57 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 BAMF_0972 69d768ed8732b0d58140154c16217a0c 575 Gene3D G3DSA:3.40.190.10 85 557 5.4E-124 T 12-10-2018 BAMF_0972 69d768ed8732b0d58140154c16217a0c 575 Gene3D G3DSA:3.10.105.10 329 543 5.4E-124 T 12-10-2018 BAMF_0972 69d768ed8732b0d58140154c16217a0c 575 SUPERFAMILY SSF53850 70 564 2.53E-120 T 12-10-2018 BAMF_0972 69d768ed8732b0d58140154c16217a0c 575 PIRSF PIRSF002741 9 574 4.4E-114 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BAMF_0972 69d768ed8732b0d58140154c16217a0c 575 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 114 484 6.6E-82 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain BAMF_0972 69d768ed8732b0d58140154c16217a0c 575 Gene3D G3DSA:3.90.76.10 103 235 5.4E-124 T 12-10-2018 BAMF_2894 3e2e9c3867e4132465bc9124cc9d6c6b 862 Gene3D G3DSA:2.40.300.10 689 859 2.3E-63 T 12-10-2018 BAMF_2894 3e2e9c3867e4132465bc9124cc9d6c6b 862 SMART SM00710 278 300 18.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_2894 3e2e9c3867e4132465bc9124cc9d6c6b 862 SMART SM00710 202 226 3200.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_2894 3e2e9c3867e4132465bc9124cc9d6c6b 862 SMART SM00710 489 511 1600.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_2894 3e2e9c3867e4132465bc9124cc9d6c6b 862 SMART SM00710 238 260 230.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_2894 3e2e9c3867e4132465bc9124cc9d6c6b 862 SMART SM00710 335 356 1500.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_2894 3e2e9c3867e4132465bc9124cc9d6c6b 862 SMART SM00710 460 482 7400.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_2894 3e2e9c3867e4132465bc9124cc9d6c6b 862 SMART SM00710 301 333 570.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_2894 3e2e9c3867e4132465bc9124cc9d6c6b 862 SUPERFAMILY SSF51126 118 410 8.88E-39 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BAMF_2894 3e2e9c3867e4132465bc9124cc9d6c6b 862 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 635 862 1.8E-79 T 12-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain BAMF_2894 3e2e9c3867e4132465bc9124cc9d6c6b 862 Pfam PF12708 Pectate lyase superfamily protein 121 340 1.8E-17 T 12-10-2018 IPR024535 Pectate lyase superfamily protein BAMF_2894 3e2e9c3867e4132465bc9124cc9d6c6b 862 Gene3D G3DSA:4.10.80.40 742 789 2.3E-63 T 12-10-2018 BAMF_2894 3e2e9c3867e4132465bc9124cc9d6c6b 862 Gene3D G3DSA:2.160.20.10 109 568 1.3E-118 T 12-10-2018 IPR012334 Pectin lyase fold BAMF_3341 bc0cbd512a9204483ede8b2fce43eaab 172 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 107 139 5.1E-9 T 12-10-2018 IPR001451 Hexapeptide repeat BAMF_3341 bc0cbd512a9204483ede8b2fce43eaab 172 Gene3D G3DSA:2.160.10.10 17 169 4.5E-29 T 12-10-2018 BAMF_3341 bc0cbd512a9204483ede8b2fce43eaab 172 SUPERFAMILY SSF51161 9 158 4.44E-33 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily BAMF_2180 b6acc7c928a58dea98a1223257dc0366 92 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.2E-22 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BAMF_2180 b6acc7c928a58dea98a1223257dc0366 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.2E-22 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BAMF_2180 b6acc7c928a58dea98a1223257dc0366 92 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.2E-22 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BAMF_2180 b6acc7c928a58dea98a1223257dc0366 92 Gene3D G3DSA:4.10.520.10 1 92 2.1E-41 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BAMF_2180 b6acc7c928a58dea98a1223257dc0366 92 SMART SM00411 1 90 7.2E-54 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BAMF_2180 b6acc7c928a58dea98a1223257dc0366 92 SUPERFAMILY SSF47729 1 90 1.62E-36 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BAMF_2180 b6acc7c928a58dea98a1223257dc0366 92 Pfam PF00216 Bacterial DNA-binding protein 1 89 1.3E-38 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BAMF_2180 b6acc7c928a58dea98a1223257dc0366 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BAMF_1356 d8f43f04dfabd95ec38809ba609e9c21 219 SMART SM00257 160 218 1.1E-9 T 12-10-2018 IPR018392 LysM domain BAMF_1356 d8f43f04dfabd95ec38809ba609e9c21 219 Gene3D G3DSA:3.10.350.10 159 217 8.3E-15 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1356 d8f43f04dfabd95ec38809ba609e9c21 219 Pfam PF01476 LysM domain 161 218 7.7E-21 T 12-10-2018 IPR018392 LysM domain BAMF_1356 d8f43f04dfabd95ec38809ba609e9c21 219 SUPERFAMILY SSF54106 158 218 4.45E-8 T 12-10-2018 BAMF_0840 708a37fbe5ea4b73c84d242c71b7554c 171 SUPERFAMILY SSF88659 93 165 3.36E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_0840 708a37fbe5ea4b73c84d242c71b7554c 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 74 162 2.9E-15 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_0840 708a37fbe5ea4b73c84d242c71b7554c 171 Gene3D G3DSA:1.10.10.10 85 165 5.9E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0840 708a37fbe5ea4b73c84d242c71b7554c 171 Pfam PF08281 Sigma-70, region 4 107 159 5.9E-16 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_2193 897b293622ed6d4d805df5f5f7b16364 449 Pfam PF03413 Peptidase propeptide and YPEB domain 377 436 3.2E-4 T 12-10-2018 IPR025711 PepSY domain BAMF_2193 897b293622ed6d4d805df5f5f7b16364 449 TIGRFAM TIGR02889 spore_YpeB: germination protein YpeB 3 439 3.3E-164 T 12-10-2018 IPR014239 Spore germination YpeB GO:0009847 BAMF_2193 897b293622ed6d4d805df5f5f7b16364 449 Pfam PF14620 YpeB sporulation 14 373 5.2E-133 T 12-10-2018 IPR014239 Spore germination YpeB GO:0009847 BAMF_1203 f5f5dc518d65768f404936cd7fa32d55 317 Gene3D G3DSA:3.40.50.2300 41 282 8.1E-74 T 12-10-2018 BAMF_1203 f5f5dc518d65768f404936cd7fa32d55 317 SUPERFAMILY SSF53822 25 267 4.77E-18 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BAMF_1203 f5f5dc518d65768f404936cd7fa32d55 317 Gene3D G3DSA:3.40.50.2300 132 298 8.1E-74 T 12-10-2018 BAMF_1203 f5f5dc518d65768f404936cd7fa32d55 317 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 27 317 2.0E-77 T 12-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 BAMF_2876 97116e5742ddbc34b79f72cd89e6c532 281 SUPERFAMILY SSF82057 198 277 6.1E-16 T 12-10-2018 BAMF_2876 97116e5742ddbc34b79f72cd89e6c532 281 Gene3D G3DSA:2.30.30.170 197 277 1.2E-13 T 12-10-2018 IPR038200 GW domain superfamily KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 BAMF_2876 97116e5742ddbc34b79f72cd89e6c532 281 SMART SM00047 39 197 3.8E-64 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BAMF_2876 97116e5742ddbc34b79f72cd89e6c532 281 Pfam PF13457 SH3-like domain 205 275 4.2E-11 T 12-10-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 BAMF_2876 97116e5742ddbc34b79f72cd89e6c532 281 PRINTS PR01002 Flagellar protein FlgJ signature 154 173 8.0E-9 T 12-10-2018 BAMF_2876 97116e5742ddbc34b79f72cd89e6c532 281 PRINTS PR01002 Flagellar protein FlgJ signature 69 87 8.0E-9 T 12-10-2018 BAMF_2876 97116e5742ddbc34b79f72cd89e6c532 281 PRINTS PR01002 Flagellar protein FlgJ signature 174 192 8.0E-9 T 12-10-2018 BAMF_2876 97116e5742ddbc34b79f72cd89e6c532 281 Gene3D G3DSA:4.10.80.30 101 126 6.8E-51 T 12-10-2018 BAMF_2876 97116e5742ddbc34b79f72cd89e6c532 281 Gene3D G3DSA:1.10.530.10 50 196 6.8E-51 T 12-10-2018 BAMF_2876 97116e5742ddbc34b79f72cd89e6c532 281 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 58 193 2.5E-23 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BAMF_1375 9ef2ec70d17a0894a7b088bbc8d1ad61 316 Gene3D G3DSA:3.10.180.10 65 219 3.5E-115 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_1375 9ef2ec70d17a0894a7b088bbc8d1ad61 316 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 104 3.9E-18 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BAMF_1375 9ef2ec70d17a0894a7b088bbc8d1ad61 316 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 154 275 9.5E-21 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BAMF_1375 9ef2ec70d17a0894a7b088bbc8d1ad61 316 Gene3D G3DSA:3.10.180.10 4 314 3.5E-115 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_1375 9ef2ec70d17a0894a7b088bbc8d1ad61 316 SUPERFAMILY SSF54593 1 292 1.54E-51 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_2660 e4b4c2205f6634f4418fb213003534df 196 SUPERFAMILY SSF46689 7 84 1.94E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_2660 e4b4c2205f6634f4418fb213003534df 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.2E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_2660 e4b4c2205f6634f4418fb213003534df 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.2E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_2660 e4b4c2205f6634f4418fb213003534df 196 Gene3D G3DSA:1.10.10.60 2 51 1.8E-24 T 12-10-2018 BAMF_2660 e4b4c2205f6634f4418fb213003534df 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 5.8E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_2660 e4b4c2205f6634f4418fb213003534df 196 Gene3D G3DSA:1.10.357.10 52 196 5.5E-39 T 12-10-2018 BAMF_2660 e4b4c2205f6634f4418fb213003534df 196 SUPERFAMILY SSF48498 80 193 6.02E-28 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BAMF_2660 e4b4c2205f6634f4418fb213003534df 196 Pfam PF08359 YsiA-like protein, C-terminal region 60 192 4.3E-61 T 12-10-2018 IPR013570 Transcription regulator YsiA, C-terminal BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 351 7.7E-145 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 SMART SM01097 1 131 8.5E-89 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 Gene3D G3DSA:3.40.50.880 164 359 4.4E-35 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 PRINTS PR00097 Anthranilate synthase component II signature 214 223 1.3E-6 T 12-10-2018 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 PRINTS PR00097 Anthranilate synthase component II signature 241 252 1.3E-6 T 12-10-2018 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 PRINTS PR00097 Anthranilate synthase component II signature 325 338 1.3E-6 T 12-10-2018 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 354 48.702 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 SUPERFAMILY SSF52021 1 145 1.26E-57 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 129 8.7E-53 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 SUPERFAMILY SSF52317 138 351 7.34E-57 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 Gene3D G3DSA:3.50.30.20 1 148 3.5E-56 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 283 294 9.3E-37 T 12-10-2018 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 172 186 9.3E-37 T 12-10-2018 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 211 225 9.3E-37 T 12-10-2018 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 258 275 9.3E-37 T 12-10-2018 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 241 257 9.3E-37 T 12-10-2018 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 PRINTS PR00096 Glutamine amidotransferase superfamily signature 214 223 7.3E-12 T 12-10-2018 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 PRINTS PR00096 Glutamine amidotransferase superfamily signature 325 338 7.3E-12 T 12-10-2018 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 PRINTS PR00096 Glutamine amidotransferase superfamily signature 241 252 7.3E-12 T 12-10-2018 BAMF_1622 3089b45fbc2cddf5565040cc8f22bac9 364 Pfam PF00117 Glutamine amidotransferase class-I 174 348 3.3E-46 T 12-10-2018 IPR017926 Glutamine amidotransferase BAMF_3113 2ee4c9f2fad9f0505a553e320a50d6b3 271 Gene3D G3DSA:3.40.190.10 32 268 1.5E-94 T 12-10-2018 BAMF_3113 2ee4c9f2fad9f0505a553e320a50d6b3 271 SUPERFAMILY SSF53850 29 269 2.12E-74 T 12-10-2018 BAMF_3113 2ee4c9f2fad9f0505a553e320a50d6b3 271 Gene3D G3DSA:3.40.190.10 112 219 1.5E-94 T 12-10-2018 BAMF_3113 2ee4c9f2fad9f0505a553e320a50d6b3 271 PIRSF PIRSF002854 1 270 1.5E-88 T 12-10-2018 IPR004872 Lipoprotein NlpA family BAMF_3113 2ee4c9f2fad9f0505a553e320a50d6b3 271 Pfam PF03180 NLPA lipoprotein 30 269 1.7E-83 T 12-10-2018 IPR004872 Lipoprotein NlpA family BAMF_0348 74ded51808d7d18dba7471dba7c5113b 317 Pfam PF01032 FecCD transport family 9 311 1.3E-65 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BAMF_0348 74ded51808d7d18dba7471dba7c5113b 317 SUPERFAMILY SSF81345 3 312 3.79E-67 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_0348 74ded51808d7d18dba7471dba7c5113b 317 Gene3D G3DSA:1.10.3470.10 1 316 3.0E-62 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_0090 66ffa9fb5f2775864aca098ec8025017 158 Gene3D G3DSA:3.30.1330.50 1 158 1.2E-69 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BAMF_0090 66ffa9fb5f2775864aca098ec8025017 158 Pfam PF02542 YgbB family 2 156 1.6E-66 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BAMF_0090 66ffa9fb5f2775864aca098ec8025017 158 SUPERFAMILY SSF69765 1 157 6.93E-68 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BAMF_0090 66ffa9fb5f2775864aca098ec8025017 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 2.7E-73 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BAMF_0090 66ffa9fb5f2775864aca098ec8025017 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BAMF_0090 66ffa9fb5f2775864aca098ec8025017 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 37.301 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BAMF_1971 9f403903f38a727ae06d963fc0dd9625 290 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 70 248 2.8E-57 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BAMF_1971 9f403903f38a727ae06d963fc0dd9625 290 Gene3D G3DSA:3.40.50.720 58 248 6.5E-81 T 12-10-2018 BAMF_1971 9f403903f38a727ae06d963fc0dd9625 290 SUPERFAMILY SSF51735 63 248 8.86E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1971 9f403903f38a727ae06d963fc0dd9625 290 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 157 179 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BAMF_1971 9f403903f38a727ae06d963fc0dd9625 290 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 69 6.2E-8 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BAMF_1971 9f403903f38a727ae06d963fc0dd9625 290 Gene3D G3DSA:3.40.50.720 6 273 6.5E-81 T 12-10-2018 BAMF_1971 9f403903f38a727ae06d963fc0dd9625 290 SUPERFAMILY SSF52283 7 95 1.49E-15 T 12-10-2018 BAMF_1041 052df12a7a87b9a7f4d741fc4881672d 289 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 181 209 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_1041 052df12a7a87b9a7f4d741fc4881672d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 133 5.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1041 052df12a7a87b9a7f4d741fc4881672d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 249 269 5.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1041 052df12a7a87b9a7f4d741fc4881672d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 47 64 5.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1041 052df12a7a87b9a7f4d741fc4881672d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 232 5.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1041 052df12a7a87b9a7f4d741fc4881672d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 213 5.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1041 052df12a7a87b9a7f4d741fc4881672d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 184 5.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1041 052df12a7a87b9a7f4d741fc4881672d 289 SUPERFAMILY SSF51735 44 286 3.61E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1041 052df12a7a87b9a7f4d741fc4881672d 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 182 2.7E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1041 052df12a7a87b9a7f4d741fc4881672d 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 194 213 2.7E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1041 052df12a7a87b9a7f4d741fc4881672d 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 133 2.7E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1041 052df12a7a87b9a7f4d741fc4881672d 289 Gene3D G3DSA:3.40.50.720 1 287 4.4E-90 T 12-10-2018 BAMF_1041 052df12a7a87b9a7f4d741fc4881672d 289 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 55 284 9.2E-66 T 12-10-2018 BAMF_2864 994e05706d30ad8d1b4138c229f30add 239 Gene3D G3DSA:1.20.120.910 1 128 3.0E-28 T 12-10-2018 BAMF_2864 994e05706d30ad8d1b4138c229f30add 239 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 89 113 4.6E-7 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 BAMF_2864 994e05706d30ad8d1b4138c229f30add 239 SUPERFAMILY SSF109635 2 90 2.22E-16 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily BAMF_2864 994e05706d30ad8d1b4138c229f30add 239 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 5 163 5.6E-58 T 12-10-2018 IPR014240 Regulatory protein, YteA family BAMF_3485 8df5b5a0229651c6ee4c51f9d708ed2e 93 Pfam PF12116 Stage III sporulation protein D 2 82 6.2E-41 T 12-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID BAMF_3485 8df5b5a0229651c6ee4c51f9d708ed2e 93 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BAMF_3485 8df5b5a0229651c6ee4c51f9d708ed2e 93 Gene3D G3DSA:1.10.10.60 1 93 1.2E-45 T 12-10-2018 BAMF_3485 8df5b5a0229651c6ee4c51f9d708ed2e 93 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 2 81 2.6E-46 T 12-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID BAMF_0532 4ad6b56f088ff772b95e737209572a29 642 Gene3D G3DSA:1.10.287.380 568 642 2.9E-6 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 BAMF_0532 4ad6b56f088ff772b95e737209572a29 642 Pfam PF00005 ABC transporter 343 473 6.8E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0532 4ad6b56f088ff772b95e737209572a29 642 Pfam PF16326 ABC transporter C-terminal domain 574 639 1.7E-12 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 BAMF_0532 4ad6b56f088ff772b95e737209572a29 642 SMART SM00382 28 245 1.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0532 4ad6b56f088ff772b95e737209572a29 642 SMART SM00382 352 518 1.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0532 4ad6b56f088ff772b95e737209572a29 642 Gene3D G3DSA:3.40.50.300 1 285 1.2E-65 T 12-10-2018 BAMF_0532 4ad6b56f088ff772b95e737209572a29 642 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0532 4ad6b56f088ff772b95e737209572a29 642 SUPERFAMILY SSF52540 4 234 3.1E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0532 4ad6b56f088ff772b95e737209572a29 642 Pfam PF00005 ABC transporter 19 191 3.0E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0532 4ad6b56f088ff772b95e737209572a29 642 SUPERFAMILY SSF52540 313 533 2.85E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0532 4ad6b56f088ff772b95e737209572a29 642 Pfam PF12848 ABC transporter 231 316 6.2E-25 T 12-10-2018 IPR032781 ABC-transporter extension domain BAMF_0532 4ad6b56f088ff772b95e737209572a29 642 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0532 4ad6b56f088ff772b95e737209572a29 642 Gene3D G3DSA:3.40.50.300 289 554 1.1E-65 T 12-10-2018 BAMF_0167 6365509bb40706f98baa7f45f4f83123 318 Gene3D G3DSA:3.40.50.1980 37 162 2.4E-28 T 12-10-2018 BAMF_0167 6365509bb40706f98baa7f45f4f83123 318 Pfam PF01497 Periplasmic binding protein 86 289 7.7E-36 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BAMF_0167 6365509bb40706f98baa7f45f4f83123 318 Gene3D G3DSA:3.40.50.1980 163 318 3.4E-46 T 12-10-2018 BAMF_0167 6365509bb40706f98baa7f45f4f83123 318 SUPERFAMILY SSF53807 44 312 1.69E-58 T 12-10-2018 BAMF_1935 6a090bd57fd5f37d7f81984f91fc1f12 380 SUPERFAMILY SSF56645 1 243 3.14E-85 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BAMF_1935 6a090bd57fd5f37d7f81984f91fc1f12 380 Gene3D G3DSA:1.10.540.10 1 120 1.9E-42 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BAMF_1935 6a090bd57fd5f37d7f81984f91fc1f12 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BAMF_1935 6a090bd57fd5f37d7f81984f91fc1f12 380 SUPERFAMILY SSF47203 229 380 3.7E-60 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BAMF_1935 6a090bd57fd5f37d7f81984f91fc1f12 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 3.0E-36 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BAMF_1935 6a090bd57fd5f37d7f81984f91fc1f12 380 Gene3D G3DSA:1.20.140.10 235 380 1.1E-57 T 12-10-2018 BAMF_1935 6a090bd57fd5f37d7f81984f91fc1f12 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 218 2.1E-27 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BAMF_1935 6a090bd57fd5f37d7f81984f91fc1f12 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BAMF_1935 6a090bd57fd5f37d7f81984f91fc1f12 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 379 2.9E-52 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BAMF_1935 6a090bd57fd5f37d7f81984f91fc1f12 380 PIRSF PIRSF016578 2 380 7.2E-28 T 12-10-2018 BAMF_1935 6a090bd57fd5f37d7f81984f91fc1f12 380 Gene3D G3DSA:2.40.110.10 121 234 2.5E-41 T 12-10-2018 BAMF_3208 a7b3b45acc6a438f90bfd85ae4301cbc 240 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 118 7.1E-21 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BAMF_3208 a7b3b45acc6a438f90bfd85ae4301cbc 240 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 225 5.5E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_3208 a7b3b45acc6a438f90bfd85ae4301cbc 240 Gene3D G3DSA:1.10.3720.10 4 229 8.6E-49 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3208 a7b3b45acc6a438f90bfd85ae4301cbc 240 SUPERFAMILY SSF161098 15 215 1.2E-38 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1906 c2e576f3edd7edd060b64c1c931b95a5 103 ProDom PD070949 MEMBRANE PROTEIN YVLA SPANNING SIMILAR SE2241 LMO0604 LMO2177 LIN2280 INTEGRAL 1 99 3.0E-24 T 12-10-2018 BAMF_1906 c2e576f3edd7edd060b64c1c931b95a5 103 Pfam PF09685 Domain of unknown function (DUF4870) 5 95 1.1E-7 T 12-10-2018 IPR019109 Protein of unknown function DUF4870 BAMF_2165 60f8c97f75b7540aafdb6f1050dd2bfb 400 Gene3D G3DSA:3.40.50.1100 56 385 2.8E-182 T 12-10-2018 BAMF_2165 60f8c97f75b7540aafdb6f1050dd2bfb 400 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 392 52.206 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BAMF_2165 60f8c97f75b7540aafdb6f1050dd2bfb 400 PIRSF PIRSF001413 2 398 4.5E-161 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BAMF_2165 60f8c97f75b7540aafdb6f1050dd2bfb 400 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 379 1.3E-51 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BAMF_2165 60f8c97f75b7540aafdb6f1050dd2bfb 400 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 390 2.5E-186 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BAMF_2165 60f8c97f75b7540aafdb6f1050dd2bfb 400 SUPERFAMILY SSF53686 5 390 3.67E-143 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BAMF_2165 60f8c97f75b7540aafdb6f1050dd2bfb 400 Gene3D G3DSA:3.40.50.1100 12 208 2.8E-182 T 12-10-2018 BAMF_2165 60f8c97f75b7540aafdb6f1050dd2bfb 400 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BAMF_2440 5ee46bc2782b014bb17e18b8ea56ee8f 451 SUPERFAMILY SSF102114 127 363 2.88E-58 T 12-10-2018 BAMF_2440 5ee46bc2782b014bb17e18b8ea56ee8f 451 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 423 4.0E-143 T 12-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 BAMF_2440 5ee46bc2782b014bb17e18b8ea56ee8f 451 Pfam PF04055 Radical SAM superfamily 149 319 3.4E-29 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BAMF_2440 5ee46bc2782b014bb17e18b8ea56ee8f 451 Pfam PF01938 TRAM domain 388 434 2.0E-6 T 12-10-2018 IPR002792 TRAM domain BAMF_2440 5ee46bc2782b014bb17e18b8ea56ee8f 451 Gene3D G3DSA:3.40.50.12160 3 132 3.2E-24 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily BAMF_2440 5ee46bc2782b014bb17e18b8ea56ee8f 451 Pfam PF00919 Uncharacterized protein family UPF0004 4 98 6.3E-26 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 BAMF_2440 5ee46bc2782b014bb17e18b8ea56ee8f 451 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 BAMF_2440 5ee46bc2782b014bb17e18b8ea56ee8f 451 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 431 6.4E-154 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 BAMF_2440 5ee46bc2782b014bb17e18b8ea56ee8f 451 Gene3D G3DSA:3.80.30.20 140 374 8.3E-88 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BAMF_2440 5ee46bc2782b014bb17e18b8ea56ee8f 451 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 6 426 3.7E-107 T 12-10-2018 BAMF_2440 5ee46bc2782b014bb17e18b8ea56ee8f 451 SMART SM00729 143 361 3.7E-61 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BAMF_1527 a961b5e3dcf16675cda6321f3833be91 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 360 408 5.1E-8 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain BAMF_1527 a961b5e3dcf16675cda6321f3833be91 555 Gene3D G3DSA:3.10.20.580 449 555 5.4E-39 T 12-10-2018 BAMF_1527 a961b5e3dcf16675cda6321f3833be91 555 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 12-10-2018 IPR001587 Ribonuclease J, conserved site BAMF_1527 a961b5e3dcf16675cda6321f3833be91 555 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 10 553 4.1E-236 T 12-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 BAMF_1527 a961b5e3dcf16675cda6321f3833be91 555 Pfam PF00753 Metallo-beta-lactamase superfamily 20 167 1.1E-14 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_1527 a961b5e3dcf16675cda6321f3833be91 555 Gene3D G3DSA:3.60.15.10 12 442 2.1E-194 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_1527 a961b5e3dcf16675cda6321f3833be91 555 SMART SM00849 21 215 4.9E-23 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_1527 a961b5e3dcf16675cda6321f3833be91 555 SUPERFAMILY SSF56281 11 423 9.39E-96 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_1527 a961b5e3dcf16675cda6321f3833be91 555 Gene3D G3DSA:3.40.50.10710 207 357 2.1E-194 T 12-10-2018 BAMF_1527 a961b5e3dcf16675cda6321f3833be91 555 Hamap MF_01491 Ribonuclease J [rnj]. 4 555 47.788 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 BAMF_1527 a961b5e3dcf16675cda6321f3833be91 555 PIRSF PIRSF004803 1 555 1.0E-247 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 BAMF_1847 4f4254499974e32913f2f49cd7e725e9 169 Pfam PF05163 DinB family 2 164 1.5E-26 T 12-10-2018 IPR007837 DNA damage-inducible protein DinB BAMF_1847 4f4254499974e32913f2f49cd7e725e9 169 SUPERFAMILY SSF109854 2 149 7.51E-31 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BAMF_1847 4f4254499974e32913f2f49cd7e725e9 169 Gene3D G3DSA:1.20.120.450 1 162 2.1E-39 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BAMF_3518 736337e95fd944b17170cb38ce2969c2 473 SUPERFAMILY SSF50615 2 82 9.94E-27 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_3518 736337e95fd944b17170cb38ce2969c2 473 Gene3D G3DSA:3.40.50.300 84 352 5.1E-113 T 12-10-2018 BAMF_3518 736337e95fd944b17170cb38ce2969c2 473 SUPERFAMILY SSF52540 84 354 4.92E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3518 736337e95fd944b17170cb38ce2969c2 473 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 80 1.9E-23 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_3518 736337e95fd944b17170cb38ce2969c2 473 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 138 351 6.0E-67 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_3518 736337e95fd944b17170cb38ce2969c2 473 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 469 57.505 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 BAMF_3518 736337e95fd944b17170cb38ce2969c2 473 SUPERFAMILY SSF47917 354 469 1.46E-51 T 12-10-2018 BAMF_3518 736337e95fd944b17170cb38ce2969c2 473 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 469 8.9E-258 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 BAMF_3518 736337e95fd944b17170cb38ce2969c2 473 Gene3D G3DSA:2.40.10.170 1 82 5.6E-32 T 12-10-2018 BAMF_3518 736337e95fd944b17170cb38ce2969c2 473 SMART SM00382 150 335 1.0E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3518 736337e95fd944b17170cb38ce2969c2 473 Gene3D G3DSA:1.10.1140.10 354 472 2.8E-55 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_3518 736337e95fd944b17170cb38ce2969c2 473 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_3666 c82d1366d88b6b89e163c6f1b7b06122 222 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 14 210 1.1E-68 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_3666 c82d1366d88b6b89e163c6f1b7b06122 222 SUPERFAMILY SSF51391 7 214 1.57E-69 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_3666 c82d1366d88b6b89e163c6f1b7b06122 222 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 13 216 29.305 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_3666 c82d1366d88b6b89e163c6f1b7b06122 222 Pfam PF02581 Thiamine monophosphate synthase 15 198 1.1E-60 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_3666 c82d1366d88b6b89e163c6f1b7b06122 222 Gene3D G3DSA:3.20.20.70 1 221 5.7E-81 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_0550 f96b579a17c8a0b75c4ac0f0217ed5e9 167 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 11 163 1.5E-36 T 12-10-2018 IPR017482 Putative phage-type endonuclease BAMF_0550 f96b579a17c8a0b75c4ac0f0217ed5e9 167 SUPERFAMILY SSF52980 13 163 4.66E-35 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BAMF_0550 f96b579a17c8a0b75c4ac0f0217ed5e9 167 Pfam PF09588 YqaJ-like viral recombinase domain 16 147 1.3E-30 T 12-10-2018 IPR019080 YqaJ viral recombinase BAMF_0550 f96b579a17c8a0b75c4ac0f0217ed5e9 167 Gene3D G3DSA:3.90.320.10 12 166 6.4E-32 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal BAMF_0172 4fffe1ac38a77bd52aa7837bfeaf59f7 455 Gene3D G3DSA:3.30.1360.60 3 80 1.2E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BAMF_0172 4fffe1ac38a77bd52aa7837bfeaf59f7 455 Pfam PF02378 Phosphotransferase system, EIIC 119 389 5.1E-38 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BAMF_0172 4fffe1ac38a77bd52aa7837bfeaf59f7 455 Pfam PF00367 phosphotransferase system, EIIB 12 45 8.5E-12 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BAMF_0172 4fffe1ac38a77bd52aa7837bfeaf59f7 455 SUPERFAMILY SSF55604 10 84 4.58E-16 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BAMF_2009 c980fcfcae321949b3cb88cb244b866f 944 Gene3D G3DSA:3.40.50.970 153 536 4.8E-137 T 12-10-2018 BAMF_2009 c980fcfcae321949b3cb88cb244b866f 944 Gene3D G3DSA:3.40.50.11610 731 938 7.2E-152 T 12-10-2018 BAMF_2009 c980fcfcae321949b3cb88cb244b866f 944 Pfam PF00676 Dehydrogenase E1 component 220 532 4.4E-95 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BAMF_2009 c980fcfcae321949b3cb88cb244b866f 944 PIRSF PIRSF000157 1 942 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BAMF_2009 c980fcfcae321949b3cb88cb244b866f 944 Gene3D G3DSA:3.40.50.12470 553 813 7.2E-152 T 12-10-2018 BAMF_2009 c980fcfcae321949b3cb88cb244b866f 944 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 796 939 1.3E-38 T 12-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BAMF_2009 c980fcfcae321949b3cb88cb244b866f 944 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 16 939 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BAMF_2009 c980fcfcae321949b3cb88cb244b866f 944 Pfam PF02779 Transketolase, pyrimidine binding domain 594 791 3.0E-57 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BAMF_2009 c980fcfcae321949b3cb88cb244b866f 944 SMART SM00861 595 791 8.3E-43 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BAMF_2009 c980fcfcae321949b3cb88cb244b866f 944 Hamap MF_01169 2-oxoglutarate dehydrogenase E1 component [odhA]. 2 942 23.755 T 12-10-2018 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BAMF_2009 c980fcfcae321949b3cb88cb244b866f 944 SUPERFAMILY SSF52518 577 798 1.96E-42 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_2009 c980fcfcae321949b3cb88cb244b866f 944 SUPERFAMILY SSF52518 150 530 6.26E-73 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_3502 d69b74b088159001e08ae8a13e6cb126 213 Gene3D G3DSA:3.40.50.720 1 211 4.5E-51 T 12-10-2018 BAMF_3502 d69b74b088159001e08ae8a13e6cb126 213 Pfam PF13460 NAD(P)H-binding 7 199 1.3E-21 T 12-10-2018 IPR016040 NAD(P)-binding domain BAMF_3502 d69b74b088159001e08ae8a13e6cb126 213 SUPERFAMILY SSF51735 1 211 1.1E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0647 249d26096dba99946584ee2f893fd01d 422 SUPERFAMILY SSF56059 102 322 1.7E-62 T 12-10-2018 BAMF_0647 249d26096dba99946584ee2f893fd01d 422 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 417 42.505 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BAMF_0647 249d26096dba99946584ee2f893fd01d 422 Gene3D G3DSA:3.40.50.20 1 93 1.6E-34 T 12-10-2018 BAMF_0647 249d26096dba99946584ee2f893fd01d 422 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 2 417 4.9E-173 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BAMF_0647 249d26096dba99946584ee2f893fd01d 422 SUPERFAMILY SSF52440 2 101 1.15E-32 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BAMF_0647 249d26096dba99946584ee2f893fd01d 422 SMART SM01210 325 417 4.3E-43 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BAMF_0647 249d26096dba99946584ee2f893fd01d 422 Gene3D G3DSA:3.90.600.10 325 421 3.6E-33 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BAMF_0647 249d26096dba99946584ee2f893fd01d 422 SMART SM01209 101 293 8.5E-131 T 12-10-2018 BAMF_0647 249d26096dba99946584ee2f893fd01d 422 Gene3D G3DSA:3.30.1490.20 119 188 9.1E-28 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BAMF_0647 249d26096dba99946584ee2f893fd01d 422 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 12-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BAMF_0647 249d26096dba99946584ee2f893fd01d 422 Gene3D G3DSA:3.30.470.20 189 324 2.9E-59 T 12-10-2018 BAMF_0647 249d26096dba99946584ee2f893fd01d 422 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 326 414 3.2E-26 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BAMF_0647 249d26096dba99946584ee2f893fd01d 422 SUPERFAMILY SSF51246 324 417 7.32E-28 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BAMF_0647 249d26096dba99946584ee2f893fd01d 422 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 9.6E-86 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BAMF_0647 249d26096dba99946584ee2f893fd01d 422 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 2 100 4.9E-31 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BAMF_2779 31ec4f499c1b4b75c8c762f754cd36e0 432 Pfam PF01225 Mur ligase family, catalytic domain 4 101 7.4E-25 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BAMF_2779 31ec4f499c1b4b75c8c762f754cd36e0 432 SUPERFAMILY SSF53623 87 293 1.83E-58 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BAMF_2779 31ec4f499c1b4b75c8c762f754cd36e0 432 Pfam PF08245 Mur ligase middle domain 106 275 7.4E-25 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BAMF_2779 31ec4f499c1b4b75c8c762f754cd36e0 432 SUPERFAMILY SSF53244 294 428 1.58E-37 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BAMF_2779 31ec4f499c1b4b75c8c762f754cd36e0 432 Pfam PF02875 Mur ligase family, glutamate ligase domain 295 377 9.4E-19 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BAMF_2779 31ec4f499c1b4b75c8c762f754cd36e0 432 Gene3D G3DSA:3.40.50.720 3 89 1.1E-21 T 12-10-2018 BAMF_2779 31ec4f499c1b4b75c8c762f754cd36e0 432 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 432 34.666 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_2779 31ec4f499c1b4b75c8c762f754cd36e0 432 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 4 430 3.4E-146 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_2779 31ec4f499c1b4b75c8c762f754cd36e0 432 Gene3D G3DSA:3.40.1190.10 91 292 1.8E-53 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BAMF_2779 31ec4f499c1b4b75c8c762f754cd36e0 432 Gene3D G3DSA:3.90.190.20 293 430 1.7E-39 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BAMF_2779 31ec4f499c1b4b75c8c762f754cd36e0 432 SUPERFAMILY SSF51984 4 88 3.92E-21 T 12-10-2018 BAMF_1909 98d97dc5740c88845bc153e3eb890daf 423 Gene3D G3DSA:2.60.40.1180 38 420 4.6E-175 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta BAMF_1909 98d97dc5740c88845bc153e3eb890daf 423 SUPERFAMILY SSF51445 48 331 1.91E-50 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_1909 98d97dc5740c88845bc153e3eb890daf 423 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 334 419 3.7E-5 T 12-10-2018 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BAMF_1909 98d97dc5740c88845bc153e3eb890daf 423 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 107 176 1.0E-4 T 12-10-2018 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BAMF_1909 98d97dc5740c88845bc153e3eb890daf 423 SUPERFAMILY SSF51011 327 422 2.22E-27 T 12-10-2018 BAMF_1909 98d97dc5740c88845bc153e3eb890daf 423 Gene3D G3DSA:3.20.20.80 49 331 4.6E-175 T 12-10-2018 BAMF_2148 26b9d63ab4d05e23330010e307ed8a77 137 SUPERFAMILY SSF52335 1 127 1.96E-50 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BAMF_2148 26b9d63ab4d05e23330010e307ed8a77 137 Pfam PF02142 MGS-like domain 14 107 2.7E-18 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain BAMF_2148 26b9d63ab4d05e23330010e307ed8a77 137 PIRSF PIRSF006614 1 132 5.8E-60 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BAMF_2148 26b9d63ab4d05e23330010e307ed8a77 137 ProSitePatterns PS01335 Methylglyoxal synthase active site. 54 62 - T 12-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BAMF_2148 26b9d63ab4d05e23330010e307ed8a77 137 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 1 119 1.4E-63 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BAMF_2148 26b9d63ab4d05e23330010e307ed8a77 137 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 1 120 34.011 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BAMF_2148 26b9d63ab4d05e23330010e307ed8a77 137 SMART SM00851 14 107 8.8E-23 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain BAMF_2148 26b9d63ab4d05e23330010e307ed8a77 137 Gene3D G3DSA:3.40.50.1380 1 130 3.7E-55 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BAMF_1064 ff7d5c105cfb4fe3ff9f223673c08453 585 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_1064 ff7d5c105cfb4fe3ff9f223673c08453 585 SMART SM00382 363 549 4.8E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1064 ff7d5c105cfb4fe3ff9f223673c08453 585 Gene3D G3DSA:3.40.50.300 329 582 1.2E-86 T 12-10-2018 BAMF_1064 ff7d5c105cfb4fe3ff9f223673c08453 585 Gene3D G3DSA:1.20.1560.10 2 320 5.3E-80 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_1064 ff7d5c105cfb4fe3ff9f223673c08453 585 SUPERFAMILY SSF52540 332 574 2.76E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1064 ff7d5c105cfb4fe3ff9f223673c08453 585 Pfam PF00005 ABC transporter 354 501 1.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1064 ff7d5c105cfb4fe3ff9f223673c08453 585 Pfam PF00664 ABC transporter transmembrane region 21 292 5.1E-42 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BAMF_1064 ff7d5c105cfb4fe3ff9f223673c08453 585 SUPERFAMILY SSF90123 6 325 4.05E-73 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_3821 6b3e377661eeb3e1166590100c246fb6 116 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 3 111 4.2E-41 T 12-10-2018 IPR005562 SpoVA BAMF_3821 6b3e377661eeb3e1166590100c246fb6 116 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 6.6E-51 T 12-10-2018 IPR014204 Sporulation stage V, protein AE BAMF_1842 6b3e377661eeb3e1166590100c246fb6 116 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 3 111 4.2E-41 T 12-10-2018 IPR005562 SpoVA BAMF_1842 6b3e377661eeb3e1166590100c246fb6 116 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 6.6E-51 T 12-10-2018 IPR014204 Sporulation stage V, protein AE BAMF_1962 6b3e377661eeb3e1166590100c246fb6 116 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 3 111 4.2E-41 T 12-10-2018 IPR005562 SpoVA BAMF_1962 6b3e377661eeb3e1166590100c246fb6 116 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 6.6E-51 T 12-10-2018 IPR014204 Sporulation stage V, protein AE BAMF_2479 b7da889ce25a22338f6248145b866102 466 Gene3D G3DSA:3.60.120.10 70 465 3.3E-105 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BAMF_2479 b7da889ce25a22338f6248145b866102 466 Pfam PF00425 chorismate binding enzyme 207 454 6.1E-79 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BAMF_2479 b7da889ce25a22338f6248145b866102 466 PRINTS PR00095 Anthranilate synthase component I signature 396 410 1.7E-9 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_2479 b7da889ce25a22338f6248145b866102 466 PRINTS PR00095 Anthranilate synthase component I signature 302 315 1.7E-9 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_2479 b7da889ce25a22338f6248145b866102 466 PRINTS PR00095 Anthranilate synthase component I signature 411 425 1.7E-9 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_2479 b7da889ce25a22338f6248145b866102 466 PRINTS PR00095 Anthranilate synthase component I signature 316 329 1.7E-9 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_2479 b7da889ce25a22338f6248145b866102 466 SUPERFAMILY SSF56322 27 463 9.29E-102 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BAMF_1760 e7f9f9becb9f5e781d62e723eb538fe3 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 8.9E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1760 e7f9f9becb9f5e781d62e723eb538fe3 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 8.9E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1760 e7f9f9becb9f5e781d62e723eb538fe3 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 8.9E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1760 e7f9f9becb9f5e781d62e723eb538fe3 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 6.7E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1760 e7f9f9becb9f5e781d62e723eb538fe3 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 6.7E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1760 e7f9f9becb9f5e781d62e723eb538fe3 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.7E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1760 e7f9f9becb9f5e781d62e723eb538fe3 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 6.7E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1760 e7f9f9becb9f5e781d62e723eb538fe3 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 6.7E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1760 e7f9f9becb9f5e781d62e723eb538fe3 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 6.7E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1760 e7f9f9becb9f5e781d62e723eb538fe3 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 241 8.9E-53 T 12-10-2018 BAMF_1760 e7f9f9becb9f5e781d62e723eb538fe3 242 Gene3D G3DSA:3.40.50.720 1 242 3.6E-71 T 12-10-2018 BAMF_1760 e7f9f9becb9f5e781d62e723eb538fe3 242 SUPERFAMILY SSF51735 3 241 1.64E-71 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0588 052bd9a865541cb3ed83613383a17e0c 132 Gene3D G3DSA:3.30.2000.30 1 132 2.4E-50 T 12-10-2018 BAMF_0588 052bd9a865541cb3ed83613383a17e0c 132 Pfam PF11367 Protein of unknown function (DUF3168) 11 125 3.2E-22 T 12-10-2018 IPR021508 Tail completion protein BAMF_0966 b6de72b634cd728e74656034dad1753e 269 Pfam PF13730 Helix-turn-helix domain 32 84 2.9E-7 T 12-10-2018 BAMF_3898 6335e0e2ebdeb078e009709363d53e1b 126 SUPERFAMILY SSF54593 1 125 4.56E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_3898 6335e0e2ebdeb078e009709363d53e1b 126 Gene3D G3DSA:3.10.180.10 1 126 4.7E-36 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_3898 6335e0e2ebdeb078e009709363d53e1b 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 124 5.4E-14 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BAMF_3215 394e04fa36f8c48447673c47997b722e 156 Pfam PF01668 SmpB protein 10 150 2.5E-64 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 BAMF_3215 394e04fa36f8c48447673c47997b722e 156 Gene3D G3DSA:2.40.280.10 3 129 5.9E-53 T 12-10-2018 IPR023620 Small protein B BAMF_3215 394e04fa36f8c48447673c47997b722e 156 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 149 7.3E-61 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 BAMF_3215 394e04fa36f8c48447673c47997b722e 156 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 79.519 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 BAMF_3215 394e04fa36f8c48447673c47997b722e 156 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site BAMF_3215 394e04fa36f8c48447673c47997b722e 156 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 132 1.0E-64 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 BAMF_3215 394e04fa36f8c48447673c47997b722e 156 SUPERFAMILY SSF74982 4 132 2.22E-54 T 12-10-2018 IPR023620 Small protein B BAMF_1177 103e8d1d63290b0624d714540ae38d4d 282 SUPERFAMILY SSF50249 149 210 2.21E-5 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_1177 103e8d1d63290b0624d714540ae38d4d 282 Pfam PF13509 S1 domain 4 62 3.1E-21 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain BAMF_1177 103e8d1d63290b0624d714540ae38d4d 282 Gene3D G3DSA:2.40.50.140 151 218 4.0E-20 T 12-10-2018 BAMF_1177 103e8d1d63290b0624d714540ae38d4d 282 Gene3D G3DSA:1.10.10.10 220 279 2.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1177 103e8d1d63290b0624d714540ae38d4d 282 PIRSF PIRSF012524 1 282 9.8E-118 T 12-10-2018 IPR014464 Conserved virulence factor B BAMF_1177 103e8d1d63290b0624d714540ae38d4d 282 Gene3D G3DSA:2.40.50.140 71 148 6.5E-26 T 12-10-2018 BAMF_1177 103e8d1d63290b0624d714540ae38d4d 282 SMART SM00316 149 211 5.1E-4 T 12-10-2018 IPR022967 RNA-binding domain, S1 BAMF_1177 103e8d1d63290b0624d714540ae38d4d 282 SMART SM00316 2 62 1.6 T 12-10-2018 IPR022967 RNA-binding domain, S1 BAMF_1518 026a718451dab4fca1bdd8fc190de7cd 302 SUPERFAMILY SSF48179 176 300 3.26E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_1518 026a718451dab4fca1bdd8fc190de7cd 302 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 150 2.9E-38 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain BAMF_1518 026a718451dab4fca1bdd8fc190de7cd 302 Gene3D G3DSA:1.10.1040.10 176 301 4.2E-29 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BAMF_1518 026a718451dab4fca1bdd8fc190de7cd 302 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 301 1.1E-74 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 BAMF_1518 026a718451dab4fca1bdd8fc190de7cd 302 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 176 299 1.8E-23 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain BAMF_1518 026a718451dab4fca1bdd8fc190de7cd 302 SUPERFAMILY SSF51735 1 173 2.87E-14 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1518 026a718451dab4fca1bdd8fc190de7cd 302 Gene3D G3DSA:3.40.50.720 1 172 2.6E-50 T 12-10-2018 BAMF_3330 34338e7c2a9f9f3abcfd9dbbe9958eec 225 Gene3D G3DSA:3.40.50.2300 2 117 1.3E-38 T 12-10-2018 BAMF_3330 34338e7c2a9f9f3abcfd9dbbe9958eec 225 SMART SM00448 2 112 2.5E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3330 34338e7c2a9f9f3abcfd9dbbe9958eec 225 SUPERFAMILY SSF46894 121 222 2.1E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_3330 34338e7c2a9f9f3abcfd9dbbe9958eec 225 SMART SM00862 146 221 1.3E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_3330 34338e7c2a9f9f3abcfd9dbbe9958eec 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 221 5.1E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_3330 34338e7c2a9f9f3abcfd9dbbe9958eec 225 SUPERFAMILY SSF52172 3 152 1.38E-42 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_3330 34338e7c2a9f9f3abcfd9dbbe9958eec 225 Gene3D G3DSA:1.10.10.10 118 224 1.5E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3330 34338e7c2a9f9f3abcfd9dbbe9958eec 225 Pfam PF00072 Response regulator receiver domain 4 112 1.7E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2210 71fb7f552663de9e450974b3a537f046 593 Gene3D G3DSA:3.30.450.20 249 359 2.1E-12 T 12-10-2018 BAMF_2210 71fb7f552663de9e450974b3a537f046 593 SUPERFAMILY SSF158472 195 242 8.89E-10 T 12-10-2018 BAMF_2210 71fb7f552663de9e450974b3a537f046 593 SUPERFAMILY SSF55785 246 356 1.15E-8 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_2210 71fb7f552663de9e450974b3a537f046 593 SUPERFAMILY SSF47384 348 432 3.73E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_2210 71fb7f552663de9e450974b3a537f046 593 SUPERFAMILY SSF55874 420 587 1.96E-49 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2210 71fb7f552663de9e450974b3a537f046 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 542 2.1E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2210 71fb7f552663de9e450974b3a537f046 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 586 2.1E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2210 71fb7f552663de9e450974b3a537f046 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 528 2.1E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2210 71fb7f552663de9e450974b3a537f046 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 2.1E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_2210 71fb7f552663de9e450974b3a537f046 593 SMART SM00387 477 589 5.0E-41 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2210 71fb7f552663de9e450974b3a537f046 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 587 1.0E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2210 71fb7f552663de9e450974b3a537f046 593 Pfam PF00989 PAS fold 253 355 6.4E-11 T 12-10-2018 IPR013767 PAS fold GO:0006355 BAMF_2210 71fb7f552663de9e450974b3a537f046 593 Pfam PF00672 HAMP domain 195 241 1.6E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_2210 71fb7f552663de9e450974b3a537f046 593 Gene3D G3DSA:1.10.287.130 360 435 7.2E-26 T 12-10-2018 BAMF_2210 71fb7f552663de9e450974b3a537f046 593 SMART SM00304 194 246 2.1E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_2210 71fb7f552663de9e450974b3a537f046 593 Pfam PF00512 His Kinase A (phospho-acceptor) domain 365 431 1.4E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_2210 71fb7f552663de9e450974b3a537f046 593 SMART SM00091 253 320 1.3E-6 T 12-10-2018 IPR000014 PAS domain BAMF_2210 71fb7f552663de9e450974b3a537f046 593 Gene3D G3DSA:1.20.1480.50 155 248 1.3E-17 T 12-10-2018 BAMF_2210 71fb7f552663de9e450974b3a537f046 593 SMART SM00388 364 431 4.5E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_2210 71fb7f552663de9e450974b3a537f046 593 Gene3D G3DSA:3.30.565.10 436 591 2.7E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2871 f7a956b9f8fd4208e1cb46e5257fec77 402 Gene3D G3DSA:3.40.50.1970 3 197 1.2E-58 T 12-10-2018 BAMF_2871 f7a956b9f8fd4208e1cb46e5257fec77 402 Pfam PF00465 Iron-containing alcohol dehydrogenase 19 385 2.4E-116 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BAMF_2871 f7a956b9f8fd4208e1cb46e5257fec77 402 Gene3D G3DSA:1.20.1090.10 199 397 2.9E-60 T 12-10-2018 BAMF_2871 f7a956b9f8fd4208e1cb46e5257fec77 402 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 186 214 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BAMF_2871 f7a956b9f8fd4208e1cb46e5257fec77 402 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 273 293 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BAMF_2871 f7a956b9f8fd4208e1cb46e5257fec77 402 SUPERFAMILY SSF56796 12 395 1.83E-119 T 12-10-2018 BAMF_1166 4a05b2667c16c5d4dd94cc7f053833a8 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 27 426 2.1E-62 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BAMF_1166 4a05b2667c16c5d4dd94cc7f053833a8 455 PIRSF PIRSF006603 9 455 1.1E-83 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BAMF_1166 4a05b2667c16c5d4dd94cc7f053833a8 455 Pfam PF01554 MatE 27 187 2.0E-33 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BAMF_1166 4a05b2667c16c5d4dd94cc7f053833a8 455 Pfam PF01554 MatE 252 413 1.1E-34 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BAMF_1692 9dfc90614ccbce9a9f330ff3f5f3003b 536 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 536 1.9E-191 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BAMF_1692 9dfc90614ccbce9a9f330ff3f5f3003b 536 Gene3D G3DSA:3.30.300.30 133 223 5.5E-10 T 12-10-2018 BAMF_1692 9dfc90614ccbce9a9f330ff3f5f3003b 536 PIRSF PIRSF004862 1 536 4.0E-114 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BAMF_1692 9dfc90614ccbce9a9f330ff3f5f3003b 536 Pfam PF01514 Secretory protein of YscJ/FliF family 31 221 8.7E-62 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF BAMF_1692 9dfc90614ccbce9a9f330ff3f5f3003b 536 PRINTS PR01009 Flagellar M-ring protein signature 122 140 1.5E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BAMF_1692 9dfc90614ccbce9a9f330ff3f5f3003b 536 PRINTS PR01009 Flagellar M-ring protein signature 270 288 1.5E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BAMF_1692 9dfc90614ccbce9a9f330ff3f5f3003b 536 PRINTS PR01009 Flagellar M-ring protein signature 349 373 1.5E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BAMF_1692 9dfc90614ccbce9a9f330ff3f5f3003b 536 PRINTS PR01009 Flagellar M-ring protein signature 154 168 1.5E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BAMF_1692 9dfc90614ccbce9a9f330ff3f5f3003b 536 PRINTS PR01009 Flagellar M-ring protein signature 198 216 1.5E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BAMF_1692 9dfc90614ccbce9a9f330ff3f5f3003b 536 Pfam PF08345 Flagellar M-ring protein C-terminal 257 402 4.2E-24 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal BAMF_1580 4a67a4975e3bd23245e3243c480639e8 415 Hamap MF_01539 UPF0348 protein . 2 404 39.921 T 12-10-2018 IPR008513 Uncharacterised protein family UPF0348 BAMF_1580 4a67a4975e3bd23245e3243c480639e8 415 Gene3D G3DSA:3.40.50.620 1 159 6.3E-39 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_1580 4a67a4975e3bd23245e3243c480639e8 415 SUPERFAMILY SSF52374 10 237 6.17E-15 T 12-10-2018 BAMF_1580 4a67a4975e3bd23245e3243c480639e8 415 Pfam PF05636 HIGH Nucleotidyl Transferase 1 388 4.5E-134 T 12-10-2018 IPR008513 Uncharacterised protein family UPF0348 BAMF_3891 ef8ee7bba2a363c676ebe94c3438fc48 281 SUPERFAMILY SSF53474 9 280 6.24E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_3891 ef8ee7bba2a363c676ebe94c3438fc48 281 Gene3D G3DSA:3.40.50.1820 6 280 1.2E-63 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_3891 ef8ee7bba2a363c676ebe94c3438fc48 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 9.5E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_3891 ef8ee7bba2a363c676ebe94c3438fc48 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 225 239 9.5E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_3891 ef8ee7bba2a363c676ebe94c3438fc48 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 9.5E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_3891 ef8ee7bba2a363c676ebe94c3438fc48 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 9.5E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_3891 ef8ee7bba2a363c676ebe94c3438fc48 281 Pfam PF00561 alpha/beta hydrolase fold 41 265 1.5E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_3262 45da49db28da700cc77f48664a3aeff8 305 SUPERFAMILY SSF103481 207 289 5.62E-11 T 12-10-2018 BAMF_3262 45da49db28da700cc77f48664a3aeff8 305 SUPERFAMILY SSF103481 43 143 4.45E-16 T 12-10-2018 BAMF_3262 45da49db28da700cc77f48664a3aeff8 305 Pfam PF00892 EamA-like transporter family 151 286 8.4E-22 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BAMF_3262 45da49db28da700cc77f48664a3aeff8 305 Pfam PF00892 EamA-like transporter family 11 140 2.2E-25 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BAMF_1077 5e8d38633cd0ed53e425de25a453303a 165 SUPERFAMILY SSF116726 79 159 1.7E-17 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BAMF_1077 5e8d38633cd0ed53e425de25a453303a 165 Gene3D G3DSA:3.30.70.1450 84 160 2.5E-18 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BAMF_1077 5e8d38633cd0ed53e425de25a453303a 165 Pfam PF02080 TrkA-C domain 90 156 6.4E-14 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BAMF_1077 5e8d38633cd0ed53e425de25a453303a 165 PIRSF PIRSF005028 1 163 6.7E-59 T 12-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT BAMF_1923 88bcc1ae4b8ed7781e38cada2f12b08a 448 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 440 9.8E-170 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 BAMF_1923 88bcc1ae4b8ed7781e38cada2f12b08a 448 Gene3D G3DSA:3.40.640.10 62 338 4.6E-164 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_1923 88bcc1ae4b8ed7781e38cada2f12b08a 448 PIRSF PIRSF000521 28 443 4.4E-29 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_1923 88bcc1ae4b8ed7781e38cada2f12b08a 448 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 248 285 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_1923 88bcc1ae4b8ed7781e38cada2f12b08a 448 Pfam PF00202 Aminotransferase class-III 23 440 4.1E-115 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_1923 88bcc1ae4b8ed7781e38cada2f12b08a 448 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 443 53.412 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 BAMF_1923 88bcc1ae4b8ed7781e38cada2f12b08a 448 Gene3D G3DSA:3.90.1150.10 10 440 4.6E-164 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1923 88bcc1ae4b8ed7781e38cada2f12b08a 448 SUPERFAMILY SSF53383 10 442 3.14E-126 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_0053 159e7f5e69a6e9f753981816d7f43287 188 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 186 3.1E-73 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BAMF_0053 159e7f5e69a6e9f753981816d7f43287 188 SUPERFAMILY SSF53178 1 185 4.97E-69 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 BAMF_0053 159e7f5e69a6e9f753981816d7f43287 188 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 36.83 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BAMF_0053 159e7f5e69a6e9f753981816d7f43287 188 Gene3D G3DSA:3.40.50.1470 1 188 4.6E-71 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 BAMF_0053 159e7f5e69a6e9f753981816d7f43287 188 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 BAMF_0053 159e7f5e69a6e9f753981816d7f43287 188 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 BAMF_0053 159e7f5e69a6e9f753981816d7f43287 188 Pfam PF01195 Peptidyl-tRNA hydrolase 3 185 1.6E-58 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BAMF_3227 9ab5cd9f1999270108818599b285a900 237 SMART SM00382 29 211 8.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3227 9ab5cd9f1999270108818599b285a900 237 Gene3D G3DSA:3.40.50.300 1 231 4.1E-58 T 12-10-2018 BAMF_3227 9ab5cd9f1999270108818599b285a900 237 SUPERFAMILY SSF52540 4 212 1.81E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3227 9ab5cd9f1999270108818599b285a900 237 Pfam PF00005 ABC transporter 21 157 1.9E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3227 9ab5cd9f1999270108818599b285a900 237 TIGRFAM TIGR03740 galliderm_ABC: lantibiotic protection ABC transporter, ATP-binding subunit 5 227 2.9E-112 T 12-10-2018 IPR022501 Gallidermin ABC transporter, ATP-binding subunit BAMF_2219 a5d63591c0b7e4b0d5d2eff733892a16 161 Pfam PF13047 Protein of unknown function (DUF3907) 10 152 3.4E-57 T 12-10-2018 IPR025013 Protein of unknown function DUF3907 BAMF_2757 737686fc10a147881d44924cfdb2ac60 582 SUPERFAMILY SSF55073 429 577 4.0E-41 T 12-10-2018 IPR029787 Nucleotide cyclase BAMF_2757 737686fc10a147881d44924cfdb2ac60 582 Gene3D G3DSA:3.30.450.40 129 267 6.4E-9 T 12-10-2018 IPR029016 GAF-like domain superfamily BAMF_2757 737686fc10a147881d44924cfdb2ac60 582 Pfam PF00990 Diguanylate cyclase, GGDEF domain 425 572 1.9E-42 T 12-10-2018 IPR000160 GGDEF domain BAMF_2757 737686fc10a147881d44924cfdb2ac60 582 SUPERFAMILY SSF55781 126 279 6.32E-10 T 12-10-2018 BAMF_2757 737686fc10a147881d44924cfdb2ac60 582 Gene3D G3DSA:3.30.450.40 268 418 7.4E-11 T 12-10-2018 IPR029016 GAF-like domain superfamily BAMF_2757 737686fc10a147881d44924cfdb2ac60 582 SMART SM00267 413 576 5.8E-55 T 12-10-2018 IPR000160 GGDEF domain BAMF_2757 737686fc10a147881d44924cfdb2ac60 582 SUPERFAMILY SSF55781 270 425 1.11E-10 T 12-10-2018 BAMF_2757 737686fc10a147881d44924cfdb2ac60 582 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 420 575 4.1E-41 T 12-10-2018 IPR000160 GGDEF domain BAMF_2757 737686fc10a147881d44924cfdb2ac60 582 Gene3D G3DSA:3.30.70.270 419 575 2.4E-47 T 12-10-2018 BAMF_0387 8297e58ef168e12d500dccb19b18c482 207 Gene3D G3DSA:3.40.630.30 1 182 2.4E-51 T 12-10-2018 BAMF_0387 8297e58ef168e12d500dccb19b18c482 207 Pfam PF13302 Acetyltransferase (GNAT) domain 9 151 1.7E-24 T 12-10-2018 IPR000182 GNAT domain BAMF_0387 8297e58ef168e12d500dccb19b18c482 207 SUPERFAMILY SSF55729 8 176 1.63E-39 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_1087 e8bf19e3acbc51015300631e30559547 285 Pfam PF13616 PPIC-type PPIASE domain 134 224 2.1E-27 T 12-10-2018 BAMF_1087 e8bf19e3acbc51015300631e30559547 285 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 37 115 1.5E-5 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 BAMF_1087 e8bf19e3acbc51015300631e30559547 285 Gene3D G3DSA:3.10.50.40 134 224 1.4E-39 T 12-10-2018 BAMF_1087 e8bf19e3acbc51015300631e30559547 285 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 163 183 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 BAMF_1087 e8bf19e3acbc51015300631e30559547 285 Hamap MF_01145 Foldase protein PrsA [prsA]. 2 278 21.63 T 12-10-2018 IPR023059 Foldase protein PrsA GO:0003755 BAMF_1087 e8bf19e3acbc51015300631e30559547 285 SUPERFAMILY SSF54534 118 222 4.64E-34 T 12-10-2018 BAMF_1087 e8bf19e3acbc51015300631e30559547 285 SUPERFAMILY SSF109998 25 164 4.71E-18 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily BAMF_2008 333380e0f3618451284bd12597b5a713 415 Gene3D G3DSA:2.40.50.100 1 103 4.3E-26 T 12-10-2018 BAMF_2008 333380e0f3618451284bd12597b5a713 415 Pfam PF02817 e3 binding domain 123 157 9.5E-13 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BAMF_2008 333380e0f3618451284bd12597b5a713 415 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 185 413 5.3E-78 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BAMF_2008 333380e0f3618451284bd12597b5a713 415 Gene3D G3DSA:3.30.559.10 184 414 2.7E-88 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_2008 333380e0f3618451284bd12597b5a713 415 Gene3D G3DSA:4.10.320.10 123 161 8.1E-15 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BAMF_2008 333380e0f3618451284bd12597b5a713 415 Pfam PF00364 Biotin-requiring enzyme 3 75 2.0E-23 T 12-10-2018 IPR000089 Biotin/lipoyl attachment BAMF_2008 333380e0f3618451284bd12597b5a713 415 SUPERFAMILY SSF52777 184 413 1.82E-85 T 12-10-2018 BAMF_2008 333380e0f3618451284bd12597b5a713 415 SUPERFAMILY SSF47005 117 160 2.09E-9 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BAMF_2008 333380e0f3618451284bd12597b5a713 415 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 414 2.1E-175 T 12-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BAMF_2008 333380e0f3618451284bd12597b5a713 415 SUPERFAMILY SSF51230 2 94 2.36E-26 T 12-10-2018 IPR011053 Single hybrid motif BAMF_2008 333380e0f3618451284bd12597b5a713 415 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BAMF_1161 b196b21ee72e5b49b9bb5cb1c100912e 118 ProDom PD067392 MEMBRANE UPF0344 TRANSMEMBRANE MW0851 BCE1257 SIMILAR YISL SAR0931 BCE33L1051 BT9727_1053 1 94 1.0E-41 T 12-10-2018 IPR010899 Protein of unknown function UPF0344 BAMF_1161 b196b21ee72e5b49b9bb5cb1c100912e 118 Hamap MF_01536 UPF0344 protein . 1 118 17.36 T 12-10-2018 IPR010899 Protein of unknown function UPF0344 BAMF_1161 b196b21ee72e5b49b9bb5cb1c100912e 118 Pfam PF07457 Protein of unknown function (DUF1516) 2 108 9.8E-37 T 12-10-2018 IPR010899 Protein of unknown function UPF0344 BAMF_2913 5f0328b67f3d8e2006e085d706c70e8d 320 SUPERFAMILY SSF48452 127 292 1.19E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_2913 5f0328b67f3d8e2006e085d706c70e8d 320 Gene3D G3DSA:1.25.40.10 92 263 1.2E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_3857 b5dabdca7e934fa499fc9e5c84c5ad6d 452 Gene3D G3DSA:3.10.450.310 208 413 5.0E-71 T 12-10-2018 BAMF_3857 b5dabdca7e934fa499fc9e5c84c5ad6d 452 Gene3D G3DSA:3.30.310.160 230 376 5.0E-71 T 12-10-2018 BAMF_3857 b5dabdca7e934fa499fc9e5c84c5ad6d 452 Pfam PF07435 YycH protein 4 452 1.0E-141 T 12-10-2018 IPR009996 Regulatory protein YycH BAMF_2858 4329fca0b6cdf5a075843c4b33173446 371 Gene3D G3DSA:3.20.20.120 119 347 9.8E-143 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BAMF_2858 4329fca0b6cdf5a075843c4b33173446 371 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 2 360 47.145 T 12-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 BAMF_2858 4329fca0b6cdf5a075843c4b33173446 371 SUPERFAMILY SSF54826 2 127 6.11E-35 T 12-10-2018 BAMF_2858 4329fca0b6cdf5a075843c4b33173446 371 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 126 9.8E-15 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BAMF_2858 4329fca0b6cdf5a075843c4b33173446 371 Gene3D G3DSA:3.30.390.10 9 360 9.8E-143 T 12-10-2018 IPR029017 Enolase-like, N-terminal BAMF_2858 4329fca0b6cdf5a075843c4b33173446 371 SUPERFAMILY SSF51604 125 360 6.42E-75 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BAMF_2858 4329fca0b6cdf5a075843c4b33173446 371 SMART SM00922 143 235 4.4E-24 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BAMF_2858 4329fca0b6cdf5a075843c4b33173446 371 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 10 334 4.7E-155 T 12-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 BAMF_2858 4329fca0b6cdf5a075843c4b33173446 371 Pfam PF13378 Enolase C-terminal domain-like 145 355 5.4E-51 T 12-10-2018 IPR029065 Enolase C-terminal domain-like BAMF_2021 8f3fc10b903735548c9054ed6882d438 298 TIGRFAM TIGR00688 rarD: protein RarD 8 262 1.9E-102 T 12-10-2018 IPR004626 RarD protein GO:0005887 BAMF_2021 8f3fc10b903735548c9054ed6882d438 298 SUPERFAMILY SSF103481 209 288 1.12E-8 T 12-10-2018 BAMF_2021 8f3fc10b903735548c9054ed6882d438 298 SUPERFAMILY SSF103481 42 147 4.45E-10 T 12-10-2018 BAMF_2021 8f3fc10b903735548c9054ed6882d438 298 Pfam PF00892 EamA-like transporter family 8 146 1.2E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BAMF_2021 8f3fc10b903735548c9054ed6882d438 298 Pfam PF00892 EamA-like transporter family 156 285 2.7E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BAMF_0777 00dec4bed53a038751032717bfe0f7fd 427 SUPERFAMILY SSF52540 168 415 3.33E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0777 00dec4bed53a038751032717bfe0f7fd 427 Pfam PF00005 ABC transporter 194 344 5.3E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0777 00dec4bed53a038751032717bfe0f7fd 427 Pfam PF00664 ABC transporter transmembrane region 1 132 1.3E-19 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BAMF_0777 00dec4bed53a038751032717bfe0f7fd 427 ProSitePatterns PS00211 ABC transporters family signature. 316 330 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0777 00dec4bed53a038751032717bfe0f7fd 427 Gene3D G3DSA:3.40.50.300 166 422 5.4E-84 T 12-10-2018 BAMF_0777 00dec4bed53a038751032717bfe0f7fd 427 SMART SM00382 203 390 1.7E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0777 00dec4bed53a038751032717bfe0f7fd 427 SUPERFAMILY SSF90123 1 156 5.36E-35 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_0777 00dec4bed53a038751032717bfe0f7fd 427 Gene3D G3DSA:1.20.1560.10 1 163 8.2E-36 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_3725 8b8bdbc93b34d7bdf51cad1023e73f42 293 PIRSF PIRSF018249 5 291 9.6E-75 T 12-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 BAMF_3725 8b8bdbc93b34d7bdf51cad1023e73f42 293 SUPERFAMILY SSF53335 21 271 9.47E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_3725 8b8bdbc93b34d7bdf51cad1023e73f42 293 Pfam PF13649 Methyltransferase domain 104 191 7.3E-12 T 12-10-2018 BAMF_3725 8b8bdbc93b34d7bdf51cad1023e73f42 293 Gene3D G3DSA:3.40.50.150 18 291 2.2E-62 T 12-10-2018 BAMF_2703 9b4bd81eaabc2717d461394981d1b707 152 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.7E-74 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 BAMF_2703 9b4bd81eaabc2717d461394981d1b707 152 Pfam PF03477 ATP cone domain 50 136 2.1E-17 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 BAMF_2703 9b4bd81eaabc2717d461394981d1b707 152 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 152 84.028 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 BAMF_3258 5c605d51138b3a86635e4e43aa417bb4 418 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 13 399 3.7E-95 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3258 5c605d51138b3a86635e4e43aa417bb4 418 Gene3D G3DSA:1.20.1250.20 16 411 7.9E-110 T 12-10-2018 BAMF_3258 5c605d51138b3a86635e4e43aa417bb4 418 ProSitePatterns PS00216 Sugar transport proteins signature 1. 321 338 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_3258 5c605d51138b3a86635e4e43aa417bb4 418 Pfam PF00083 Sugar (and other) transporter 30 399 3.7E-95 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BAMF_3258 5c605d51138b3a86635e4e43aa417bb4 418 ProSitePatterns PS00216 Sugar transport proteins signature 1. 80 97 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_3258 5c605d51138b3a86635e4e43aa417bb4 418 PRINTS PR00171 Sugar transporter signature 277 287 1.7E-20 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3258 5c605d51138b3a86635e4e43aa417bb4 418 PRINTS PR00171 Sugar transporter signature 386 398 1.7E-20 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3258 5c605d51138b3a86635e4e43aa417bb4 418 PRINTS PR00171 Sugar transporter signature 117 136 1.7E-20 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3258 5c605d51138b3a86635e4e43aa417bb4 418 PRINTS PR00171 Sugar transporter signature 34 44 1.7E-20 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3258 5c605d51138b3a86635e4e43aa417bb4 418 PRINTS PR00171 Sugar transporter signature 363 384 1.7E-20 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3258 5c605d51138b3a86635e4e43aa417bb4 418 ProSitePatterns PS00217 Sugar transport proteins signature 2. 122 147 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_3258 5c605d51138b3a86635e4e43aa417bb4 418 SUPERFAMILY SSF103473 15 406 7.19E-64 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3407 0cc47950f03da4c6df002ded5e909c7a 379 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 25 363 1.2E-121 T 12-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BAMF_3407 0cc47950f03da4c6df002ded5e909c7a 379 SUPERFAMILY SSF53756 3 368 1.48E-139 T 12-10-2018 BAMF_3407 0cc47950f03da4c6df002ded5e909c7a 379 Gene3D G3DSA:3.40.50.2000 191 351 2.4E-156 T 12-10-2018 BAMF_3407 0cc47950f03da4c6df002ded5e909c7a 379 Gene3D G3DSA:3.40.50.2000 6 360 2.4E-156 T 12-10-2018 BAMF_3407 0cc47950f03da4c6df002ded5e909c7a 379 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 366 1.3E-174 T 12-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 BAMF_2975 f84169698321d15793a6b8d3e6fa1f90 183 Pfam PF00857 Isochorismatase family 4 181 1.4E-38 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 BAMF_2975 f84169698321d15793a6b8d3e6fa1f90 183 Gene3D G3DSA:3.40.50.850 1 183 6.9E-56 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BAMF_2975 f84169698321d15793a6b8d3e6fa1f90 183 SUPERFAMILY SSF52499 2 181 6.67E-52 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 Gene3D G3DSA:3.90.1440.10 227 348 0.0 T 12-10-2018 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 SUPERFAMILY SSF81886 571 829 2.88E-78 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 Pfam PF02810 SEC-C motif 821 839 7.7E-8 T 12-10-2018 IPR004027 SEC-C motif BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 SUPERFAMILY SSF52540 6 395 8.86E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 SMART SM00958 226 338 1.6E-69 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 Gene3D G3DSA:1.10.1200.230 621 705 0.0 T 12-10-2018 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 Gene3D G3DSA:3.40.50.300 397 570 0.0 T 12-10-2018 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 SUPERFAMILY SSF81767 225 348 3.14E-48 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 ProSitePatterns PS01312 SecA family signature. 480 495 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 PRINTS PR00906 SecA protein signature 393 406 4.0E-71 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 PRINTS PR00906 SecA protein signature 99 113 4.0E-71 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 PRINTS PR00906 SecA protein signature 168 188 4.0E-71 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 PRINTS PR00906 SecA protein signature 61 85 4.0E-71 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 PRINTS PR00906 SecA protein signature 356 373 4.0E-71 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 PRINTS PR00906 SecA protein signature 115 125 4.0E-71 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 PRINTS PR00906 SecA protein signature 319 341 4.0E-71 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 SUPERFAMILY SSF52540 397 568 8.78E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 Gene3D G3DSA:1.10.3060.10 571 777 0.0 T 12-10-2018 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 496 5.7E-246 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 781 19.646 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 Gene3D G3DSA:3.40.50.300 14 396 0.0 T 12-10-2018 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 Pfam PF01043 SecA preprotein cross-linking domain 230 338 1.3E-42 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 Pfam PF07517 SecA DEAD-like domain 6 382 2.8E-129 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 SMART SM00957 5 382 9.6E-283 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BAMF_3371 779288979c062fe77c2ffe9455d1804b 841 Pfam PF07516 SecA Wing and Scaffold domain 568 778 3.1E-64 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 BAMF_3504 eb77580ac76ef3dce55f8d88963bc49b 569 ProSitePatterns PS01120 Urease nickel ligands signature. 130 143 - T 12-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3504 eb77580ac76ef3dce55f8d88963bc49b 569 Gene3D G3DSA:2.30.40.10 2 482 1.1E-294 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_3504 eb77580ac76ef3dce55f8d88963bc49b 569 Pfam PF00449 Urease alpha-subunit, N-terminal domain 1 122 3.7E-57 T 12-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3504 eb77580ac76ef3dce55f8d88963bc49b 569 Gene3D G3DSA:3.20.20.140 132 550 1.1E-294 T 12-10-2018 BAMF_3504 eb77580ac76ef3dce55f8d88963bc49b 569 SUPERFAMILY SSF51338 424 479 1.87E-5 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_3504 eb77580ac76ef3dce55f8d88963bc49b 569 Pfam PF01979 Amidohydrolase family 128 455 4.5E-77 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BAMF_3504 eb77580ac76ef3dce55f8d88963bc49b 569 Hamap MF_01953 Urease subunit alpha [ureC]. 1 569 57.718 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3504 eb77580ac76ef3dce55f8d88963bc49b 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 429 442 5.1E-32 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3504 eb77580ac76ef3dce55f8d88963bc49b 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 298 315 5.1E-32 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3504 eb77580ac76ef3dce55f8d88963bc49b 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 337 353 5.1E-32 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3504 eb77580ac76ef3dce55f8d88963bc49b 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 403 418 5.1E-32 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3504 eb77580ac76ef3dce55f8d88963bc49b 569 ProSitePatterns PS00145 Urease active site. 320 336 - T 12-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3504 eb77580ac76ef3dce55f8d88963bc49b 569 SUPERFAMILY SSF51556 133 569 1.97E-191 T 12-10-2018 IPR032466 Metal-dependent hydrolase BAMF_3504 eb77580ac76ef3dce55f8d88963bc49b 569 SUPERFAMILY SSF51338 2 180 4.89E-66 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_3504 eb77580ac76ef3dce55f8d88963bc49b 569 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 2 569 1.3E-294 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_0880 cac3b827b4a7486f43651d3bfa2f6f2e 157 Gene3D G3DSA:3.40.30.10 2 155 5.5E-53 T 12-10-2018 BAMF_0880 cac3b827b4a7486f43651d3bfa2f6f2e 157 SUPERFAMILY SSF52833 3 154 2.69E-52 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_0880 cac3b827b4a7486f43651d3bfa2f6f2e 157 PIRSF PIRSF000239 1 157 4.7E-29 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BAMF_0880 cac3b827b4a7486f43651d3bfa2f6f2e 157 Pfam PF00578 AhpC/TSA family 5 132 5.6E-40 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BAMF_1264 364525704529be1178b0f9450f4e223f 171 SUPERFAMILY SSF55144 1 170 4.53E-34 T 12-10-2018 IPR009097 Cyclic phosphodiesterase BAMF_1264 364525704529be1178b0f9450f4e223f 171 Hamap MF_01444 Putative phosphoesterase . 1 168 39.409 T 12-10-2018 IPR022932 Putative phosphoesterase YjcG BAMF_1264 364525704529be1178b0f9450f4e223f 171 Pfam PF13563 2'-5' RNA ligase superfamily 11 154 2.4E-21 T 12-10-2018 BAMF_1264 364525704529be1178b0f9450f4e223f 171 Gene3D G3DSA:3.90.1140.10 1 171 5.7E-42 T 12-10-2018 BAMF_1952 c8555b8b8330e84d4afcc12cc5cd34d5 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.4E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_1952 c8555b8b8330e84d4afcc12cc5cd34d5 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_1952 c8555b8b8330e84d4afcc12cc5cd34d5 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_1952 c8555b8b8330e84d4afcc12cc5cd34d5 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_1952 c8555b8b8330e84d4afcc12cc5cd34d5 300 Gene3D G3DSA:3.40.190.290 90 298 3.6E-53 T 12-10-2018 BAMF_1952 c8555b8b8330e84d4afcc12cc5cd34d5 300 SUPERFAMILY SSF46785 1 84 1.28E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1952 c8555b8b8330e84d4afcc12cc5cd34d5 300 Gene3D G3DSA:1.10.10.10 1 84 7.9E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1952 c8555b8b8330e84d4afcc12cc5cd34d5 300 SUPERFAMILY SSF53850 88 296 3.14E-41 T 12-10-2018 BAMF_1952 c8555b8b8330e84d4afcc12cc5cd34d5 300 Pfam PF03466 LysR substrate binding domain 89 291 7.9E-47 T 12-10-2018 IPR005119 LysR, substrate-binding BAMF_2839 03ccb0e8a45758b9bd5fe9ce2b72dc8f 527 Gene3D G3DSA:3.40.449.10 28 213 9.4E-227 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BAMF_2839 03ccb0e8a45758b9bd5fe9ce2b72dc8f 527 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 250 265 - T 12-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BAMF_2839 03ccb0e8a45758b9bd5fe9ce2b72dc8f 527 Pfam PF01293 Phosphoenolpyruvate carboxykinase 18 481 1.2E-225 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BAMF_2839 03ccb0e8a45758b9bd5fe9ce2b72dc8f 527 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 12 527 55.796 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BAMF_2839 03ccb0e8a45758b9bd5fe9ce2b72dc8f 527 SUPERFAMILY SSF53795 213 522 1.6E-135 T 12-10-2018 BAMF_2839 03ccb0e8a45758b9bd5fe9ce2b72dc8f 527 SUPERFAMILY SSF68923 11 212 4.71E-80 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BAMF_2839 03ccb0e8a45758b9bd5fe9ce2b72dc8f 527 Gene3D G3DSA:2.170.8.10 38 330 9.4E-227 T 12-10-2018 BAMF_2839 03ccb0e8a45758b9bd5fe9ce2b72dc8f 527 Gene3D G3DSA:3.90.228.20 214 513 9.4E-227 T 12-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BAMF_2839 03ccb0e8a45758b9bd5fe9ce2b72dc8f 527 PIRSF PIRSF006294 3 526 3.5E-242 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BAMF_2839 03ccb0e8a45758b9bd5fe9ce2b72dc8f 527 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 2 526 2.6E-267 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BAMF_1053 21eb5b4948c997af737df59e0f1dc6e3 119 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 113 3.0E-22 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BAMF_1053 21eb5b4948c997af737df59e0f1dc6e3 119 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 118 16.864 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BAMF_1053 21eb5b4948c997af737df59e0f1dc6e3 119 TIGRFAM TIGR00494 crcB: protein CrcB 6 116 5.9E-31 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BAMF_1312 f7dee17beb5cf7ff01fe09d89c9604dd 179 Gene3D G3DSA:2.40.40.20 1 117 6.6E-27 T 12-10-2018 BAMF_1312 f7dee17beb5cf7ff01fe09d89c9604dd 179 SUPERFAMILY SSF50692 2 136 3.32E-30 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BAMF_1312 f7dee17beb5cf7ff01fe09d89c9604dd 179 Pfam PF01568 Molydopterin dinucleotide binding domain 2 105 1.3E-21 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 Gene3D G3DSA:3.40.50.200 190 515 3.3E-79 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 Pfam PF05547 Immune inhibitor A peptidase M6 697 789 2.0E-10 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 Gene3D G3DSA:2.60.40.1120 909 984 5.8E-11 T 12-10-2018 BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 Gene3D G3DSA:2.60.40.1120 830 903 1.4E-10 T 12-10-2018 BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 Pfam PF05922 Peptidase inhibitor I9 68 177 1.5E-6 T 12-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 450 460 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 Pfam PF13620 Carboxypeptidase regulatory-like domain 908 977 1.5E-9 T 12-10-2018 BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 SUPERFAMILY SSF49464 834 902 2.94E-8 T 12-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 274 284 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 Gene3D G3DSA:2.60.40.10 1239 1320 9.3E-14 T 12-10-2018 IPR013783 Immunoglobulin-like fold BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 Gene3D G3DSA:2.60.40.10 1156 1236 5.8E-10 T 12-10-2018 IPR013783 Immunoglobulin-like fold BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 SUPERFAMILY SSF49899 636 789 4.59E-8 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 PIRSF PIRSF015477 1 1429 0.0 T 12-10-2018 IPR012103 Peptidase S8A, bacillopeptidase F BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 Pfam PF13715 CarboxypepD_reg-like domain 835 903 4.9E-8 T 12-10-2018 BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 PRINTS PR00723 Subtilisin serine protease family (S8) signature 270 283 1.7E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 PRINTS PR00723 Subtilisin serine protease family (S8) signature 218 237 1.7E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 PRINTS PR00723 Subtilisin serine protease family (S8) signature 449 465 1.7E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 SUPERFAMILY SSF49464 908 998 8.24E-13 T 12-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 Pfam PF00082 Subtilase family 218 504 2.8E-51 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BAMF_1601 305d2ecdceb5498034c98f913c189aa8 1429 SUPERFAMILY SSF52743 163 515 7.07E-70 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BAMF_0130 dc468fcc1e00d40f1e3ed51c8736fca2 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 33.253 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0130 dc468fcc1e00d40f1e3ed51c8736fca2 132 Pfam PF00410 Ribosomal protein S8 5 132 1.7E-55 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0130 dc468fcc1e00d40f1e3ed51c8736fca2 132 Gene3D G3DSA:3.30.1490.10 75 132 5.5E-27 T 12-10-2018 BAMF_0130 dc468fcc1e00d40f1e3ed51c8736fca2 132 Gene3D G3DSA:3.30.1370.30 4 74 3.2E-34 T 12-10-2018 BAMF_0130 dc468fcc1e00d40f1e3ed51c8736fca2 132 SUPERFAMILY SSF56047 2 132 1.57E-50 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0130 dc468fcc1e00d40f1e3ed51c8736fca2 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_3014 456df2617b1382ba7b2d19c7cb770dda 99 Gene3D G3DSA:1.20.225.10 36 99 3.6E-25 T 12-10-2018 IPR009086 Bacteriocin AS-48 BAMF_3014 456df2617b1382ba7b2d19c7cb770dda 99 TIGRFAM TIGR03651 circ_ocin_uber: circular bacteriocin, circularin A/uberolysin family 34 99 7.2E-20 T 12-10-2018 IPR020038 Circular bacteriocin, circularin A/uberolysin family BAMF_3014 456df2617b1382ba7b2d19c7cb770dda 99 Pfam PF09221 Bacteriocin class IId cyclical uberolysin-like 37 99 6.0E-20 T 12-10-2018 IPR020038 Circular bacteriocin, circularin A/uberolysin family BAMF_0268 12e6b6bcd457cbfcab56b78c5b3b44f1 400 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_0268 12e6b6bcd457cbfcab56b78c5b3b44f1 400 Pfam PF07690 Major Facilitator Superfamily 21 265 1.1E-37 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0268 12e6b6bcd457cbfcab56b78c5b3b44f1 400 Gene3D G3DSA:1.20.1250.20 10 400 3.1E-87 T 12-10-2018 BAMF_0268 12e6b6bcd457cbfcab56b78c5b3b44f1 400 SUPERFAMILY SSF103473 8 397 1.83E-83 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0381 972fffe3d6fd7d3c48e1993fb3087750 667 SUPERFAMILY SSF56519 148 333 2.22E-37 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BAMF_0381 972fffe3d6fd7d3c48e1993fb3087750 667 Pfam PF03717 Penicillin-binding Protein dimerisation domain 154 321 2.9E-34 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BAMF_0381 972fffe3d6fd7d3c48e1993fb3087750 667 Gene3D G3DSA:3.30.1390.30 175 248 1.5E-48 T 12-10-2018 BAMF_0381 972fffe3d6fd7d3c48e1993fb3087750 667 SUPERFAMILY SSF54427 27 145 4.29E-29 T 12-10-2018 IPR032710 NTF2-like domain superfamily BAMF_0381 972fffe3d6fd7d3c48e1993fb3087750 667 Gene3D G3DSA:3.40.710.10 333 667 1.2E-84 T 12-10-2018 BAMF_0381 972fffe3d6fd7d3c48e1993fb3087750 667 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 25 146 1.6E-33 T 12-10-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 BAMF_0381 972fffe3d6fd7d3c48e1993fb3087750 667 SUPERFAMILY SSF56601 334 665 2.07E-76 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_0381 972fffe3d6fd7d3c48e1993fb3087750 667 Gene3D G3DSA:3.10.450.100 23 141 4.5E-17 T 12-10-2018 BAMF_0381 972fffe3d6fd7d3c48e1993fb3087750 667 Pfam PF00905 Penicillin binding protein transpeptidase domain 351 662 6.4E-73 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BAMF_0381 972fffe3d6fd7d3c48e1993fb3087750 667 Gene3D G3DSA:3.90.1310.10 155 329 1.5E-48 T 12-10-2018 BAMF_3106 46926922cd15a5e5237737694bced4ce 465 Pfam PF01458 Uncharacterized protein family (UPF0051) 211 436 2.5E-74 T 12-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 BAMF_3106 46926922cd15a5e5237737694bced4ce 465 SUPERFAMILY SSF101960 32 462 2.48E-140 T 12-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BAMF_3106 46926922cd15a5e5237737694bced4ce 465 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 10 456 6.0E-232 T 12-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 BAMF_0552 ba9c91dd33c31967284306665f8b5ec1 279 Pfam PF03837 RecT family 49 235 5.4E-50 T 12-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 BAMF_0552 ba9c91dd33c31967284306665f8b5ec1 279 TIGRFAM TIGR00616 rect: recombinase, phage RecT family 1 229 4.6E-99 T 12-10-2018 IPR004590 DNA single-strand annealing protein RecT GO:0003677|GO:0006259 BAMF_1192 3c595675f792f372f965863862b0fdd9 345 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 12-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BAMF_1192 3c595675f792f372f965863862b0fdd9 345 SUPERFAMILY SSF55347 149 313 2.18E-55 T 12-10-2018 BAMF_1192 3c595675f792f372f965863862b0fdd9 345 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 345 5.1E-138 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BAMF_1192 3c595675f792f372f965863862b0fdd9 345 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 140 1.1E-32 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BAMF_1192 3c595675f792f372f965863862b0fdd9 345 SUPERFAMILY SSF51735 2 175 3.43E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1192 3c595675f792f372f965863862b0fdd9 345 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 158 316 1.4E-28 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BAMF_1192 3c595675f792f372f965863862b0fdd9 345 Gene3D G3DSA:3.30.360.10 147 313 3.9E-125 T 12-10-2018 BAMF_1192 3c595675f792f372f965863862b0fdd9 345 Gene3D G3DSA:3.40.50.720 2 331 3.9E-125 T 12-10-2018 BAMF_1192 3c595675f792f372f965863862b0fdd9 345 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 339 42.871 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BAMF_1192 3c595675f792f372f965863862b0fdd9 345 SMART SM00859 2 141 3.6E-45 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BAMF_0771 119a8e748bfbd667463df107bf432da4 189 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 157 6.0E-39 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 BAMF_0771 119a8e748bfbd667463df107bf432da4 189 SUPERFAMILY SSF51735 1 157 2.99E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0771 119a8e748bfbd667463df107bf432da4 189 Gene3D G3DSA:3.40.50.720 1 158 3.4E-47 T 12-10-2018 BAMF_3706 40a019fac2113c86ccd8dff3f804ea41 537 PIRSF PIRSF038928 14 509 4.0E-180 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3706 40a019fac2113c86ccd8dff3f804ea41 537 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 357 365 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3706 40a019fac2113c86ccd8dff3f804ea41 537 Pfam PF00199 Catalase 26 415 1.9E-172 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3706 40a019fac2113c86ccd8dff3f804ea41 537 SUPERFAMILY SSF56634 18 505 2.62E-196 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3706 40a019fac2113c86ccd8dff3f804ea41 537 Pfam PF06628 Catalase-related immune-responsive 441 503 1.1E-20 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3706 40a019fac2113c86ccd8dff3f804ea41 537 ProSitePatterns PS00438 Catalase proximal active site signature. 62 78 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3706 40a019fac2113c86ccd8dff3f804ea41 537 SMART SM01060 26 419 5.0E-252 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3706 40a019fac2113c86ccd8dff3f804ea41 537 PRINTS PR00067 Catalase signature 107 125 1.9E-64 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3706 40a019fac2113c86ccd8dff3f804ea41 537 PRINTS PR00067 Catalase signature 344 370 1.9E-64 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3706 40a019fac2113c86ccd8dff3f804ea41 537 PRINTS PR00067 Catalase signature 312 339 1.9E-64 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3706 40a019fac2113c86ccd8dff3f804ea41 537 PRINTS PR00067 Catalase signature 147 165 1.9E-64 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3706 40a019fac2113c86ccd8dff3f804ea41 537 PRINTS PR00067 Catalase signature 128 145 1.9E-64 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3706 40a019fac2113c86ccd8dff3f804ea41 537 PRINTS PR00067 Catalase signature 39 62 1.9E-64 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3706 40a019fac2113c86ccd8dff3f804ea41 537 Gene3D G3DSA:2.40.180.10 22 524 1.2E-223 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 BAMF_2579 0076565aa0e4c4dc78775815879f70f8 128 Pfam PF12670 Protein of unknown function (DUF3792) 9 119 8.9E-22 T 12-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane BAMF_2579 0076565aa0e4c4dc78775815879f70f8 128 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 10 122 2.6E-28 T 12-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane BAMF_3847 421d8ce9306682604e382373554e2102 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 3.6E-15 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_3847 421d8ce9306682604e382373554e2102 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 52 3.6E-15 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_3847 421d8ce9306682604e382373554e2102 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 5 20 3.6E-15 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_3847 421d8ce9306682604e382373554e2102 95 SUPERFAMILY SSF46785 3 83 3.69E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3847 421d8ce9306682604e382373554e2102 95 Pfam PF01022 Bacterial regulatory protein, arsR family 10 55 5.0E-18 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_3847 421d8ce9306682604e382373554e2102 95 Gene3D G3DSA:1.10.10.10 1 92 1.0E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3847 421d8ce9306682604e382373554e2102 95 SMART SM00418 3 81 2.2E-29 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_0079 359c143db0e5c491e59d8d40b24ab12a 167 SUPERFAMILY SSF55083 3 140 1.07E-53 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BAMF_0079 359c143db0e5c491e59d8d40b24ab12a 167 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 134 9.7E-40 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BAMF_0079 359c143db0e5c491e59d8d40b24ab12a 167 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BAMF_0079 359c143db0e5c491e59d8d40b24ab12a 167 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 134 1.8E-49 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BAMF_0079 359c143db0e5c491e59d8d40b24ab12a 167 Gene3D G3DSA:3.30.70.560 2 164 3.4E-58 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BAMF_3159 d8a501ea23eccd92a911b1fa4663a0f3 314 SUPERFAMILY SSF53807 39 309 5.1E-67 T 12-10-2018 BAMF_3159 d8a501ea23eccd92a911b1fa4663a0f3 314 Pfam PF01497 Periplasmic binding protein 62 287 1.7E-41 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BAMF_3159 d8a501ea23eccd92a911b1fa4663a0f3 314 Gene3D G3DSA:3.40.50.1980 184 310 1.9E-38 T 12-10-2018 BAMF_3159 d8a501ea23eccd92a911b1fa4663a0f3 314 Gene3D G3DSA:3.40.50.1980 46 180 8.5E-40 T 12-10-2018 BAMF_1748 1df56723d088261af9a96d344ab59caf 404 SUPERFAMILY SSF53633 3 247 6.02E-68 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BAMF_1748 1df56723d088261af9a96d344ab59caf 404 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_1748 1df56723d088261af9a96d344ab59caf 404 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 67 401 1.6E-92 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_1748 1df56723d088261af9a96d344ab59caf 404 Gene3D G3DSA:3.40.1160.10 1 256 6.4E-83 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BAMF_1748 1df56723d088261af9a96d344ab59caf 404 SUPERFAMILY SSF55021 260 346 5.95E-12 T 12-10-2018 BAMF_1748 1df56723d088261af9a96d344ab59caf 404 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 403 1.9E-149 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_1748 1df56723d088261af9a96d344ab59caf 404 SUPERFAMILY SSF55021 334 403 4.24E-16 T 12-10-2018 BAMF_1748 1df56723d088261af9a96d344ab59caf 404 Gene3D G3DSA:3.30.2130.10 257 404 6.8E-32 T 12-10-2018 BAMF_1748 1df56723d088261af9a96d344ab59caf 404 PIRSF PIRSF000726 1 65 2.0E-7 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_1748 1df56723d088261af9a96d344ab59caf 404 PIRSF PIRSF000726 60 404 3.0E-88 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_1748 1df56723d088261af9a96d344ab59caf 404 Pfam PF13840 ACT domain 336 398 5.8E-22 T 12-10-2018 IPR027795 CASTOR, ACT domain BAMF_1748 1df56723d088261af9a96d344ab59caf 404 Pfam PF00696 Amino acid kinase family 2 235 5.5E-48 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BAMF_0338 c81949d6d9f5d86b76186ff44ba1eadd 383 Gene3D G3DSA:3.30.70.360 180 294 1.6E-135 T 12-10-2018 BAMF_0338 c81949d6d9f5d86b76186ff44ba1eadd 383 Pfam PF07687 Peptidase dimerisation domain 184 277 5.6E-12 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain BAMF_0338 c81949d6d9f5d86b76186ff44ba1eadd 383 Gene3D G3DSA:3.40.630.10 13 364 1.6E-135 T 12-10-2018 BAMF_0338 c81949d6d9f5d86b76186ff44ba1eadd 383 SUPERFAMILY SSF53187 4 380 9.57E-84 T 12-10-2018 BAMF_0338 c81949d6d9f5d86b76186ff44ba1eadd 383 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 367 3.7E-122 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BAMF_0338 c81949d6d9f5d86b76186ff44ba1eadd 383 SUPERFAMILY SSF55031 182 295 1.44E-30 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BAMF_0338 c81949d6d9f5d86b76186ff44ba1eadd 383 Pfam PF01546 Peptidase family M20/M25/M40 72 376 5.1E-37 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BAMF_0338 c81949d6d9f5d86b76186ff44ba1eadd 383 PIRSF PIRSF005962 1 383 1.6E-125 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BAMF_1783 4eed05b0025668e3e09f2d656e763db6 420 SUPERFAMILY SSF53901 186 419 1.05E-61 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1783 4eed05b0025668e3e09f2d656e763db6 420 Gene3D G3DSA:3.40.47.10 189 340 7.8E-178 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1783 4eed05b0025668e3e09f2d656e763db6 420 Gene3D G3DSA:3.40.47.10 5 418 7.8E-178 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1783 4eed05b0025668e3e09f2d656e763db6 420 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 266 415 6.7E-12 T 12-10-2018 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: R-HSA-1989781 BAMF_1783 4eed05b0025668e3e09f2d656e763db6 420 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 4 180 2.5E-11 T 12-10-2018 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: R-HSA-1989781 BAMF_1783 4eed05b0025668e3e09f2d656e763db6 420 SUPERFAMILY SSF53901 4 181 1.19E-33 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_2143 5fac4c6e4ab1dd5f072ac1d518b90858 277 Pfam PF02548 Ketopantoate hydroxymethyltransferase 5 259 2.5E-110 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BAMF_2143 5fac4c6e4ab1dd5f072ac1d518b90858 277 SUPERFAMILY SSF51621 3 263 1.35E-105 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BAMF_2143 5fac4c6e4ab1dd5f072ac1d518b90858 277 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 263 42.707 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BAMF_2143 5fac4c6e4ab1dd5f072ac1d518b90858 277 Gene3D G3DSA:3.20.20.60 2 271 1.4E-111 T 12-10-2018 BAMF_2143 5fac4c6e4ab1dd5f072ac1d518b90858 277 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 264 1.3E-130 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BAMF_2143 5fac4c6e4ab1dd5f072ac1d518b90858 277 PIRSF PIRSF000388 1 266 8.7E-110 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BAMF_1411 0a9508fdb1703e319c1d46dafd933289 545 SMART SM00382 34 246 4.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1411 0a9508fdb1703e319c1d46dafd933289 545 SMART SM00382 317 506 1.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1411 0a9508fdb1703e319c1d46dafd933289 545 SUPERFAMILY SSF52540 283 511 9.69E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1411 0a9508fdb1703e319c1d46dafd933289 545 Gene3D G3DSA:3.40.50.300 283 520 2.2E-67 T 12-10-2018 BAMF_1411 0a9508fdb1703e319c1d46dafd933289 545 Pfam PF00005 ABC transporter 26 175 2.5E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1411 0a9508fdb1703e319c1d46dafd933289 545 Pfam PF00005 ABC transporter 309 449 6.4E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1411 0a9508fdb1703e319c1d46dafd933289 545 SUPERFAMILY SSF52540 6 239 1.3E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1411 0a9508fdb1703e319c1d46dafd933289 545 ProSitePatterns PS00211 ABC transporters family signature. 422 436 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_1411 0a9508fdb1703e319c1d46dafd933289 545 Gene3D G3DSA:3.40.50.300 4 246 6.4E-63 T 12-10-2018 BAMF_0384 c1b78a7f1367c8e0dc74db73929a8f3b 504 SUPERFAMILY SSF56801 5 501 3.01E-135 T 12-10-2018 BAMF_0384 c1b78a7f1367c8e0dc74db73929a8f3b 504 Pfam PF13193 AMP-binding enzyme C-terminal domain 418 491 9.2E-15 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_0384 c1b78a7f1367c8e0dc74db73929a8f3b 504 Gene3D G3DSA:3.30.300.310 404 503 1.8E-28 T 12-10-2018 BAMF_0384 c1b78a7f1367c8e0dc74db73929a8f3b 504 ProSitePatterns PS00455 Putative AMP-binding domain signature. 164 175 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_0384 c1b78a7f1367c8e0dc74db73929a8f3b 504 Gene3D G3DSA:3.40.50.12780 1 401 4.2E-105 T 12-10-2018 BAMF_0384 c1b78a7f1367c8e0dc74db73929a8f3b 504 Pfam PF00501 AMP-binding enzyme 17 408 9.1E-96 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 Gene3D G3DSA:1.10.8.60 490 582 1.1E-34 T 12-10-2018 BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 SMART SM00464 8 200 1.3E-73 T 12-10-2018 IPR003111 Lon, substrate-binding domain BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 350 487 9.6E-24 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 354 373 6.2E-53 T 12-10-2018 BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 701 720 6.2E-53 T 12-10-2018 BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 724 742 6.2E-53 T 12-10-2018 BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 671 690 6.2E-53 T 12-10-2018 BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 593 609 6.2E-53 T 12-10-2018 BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 SUPERFAMILY SSF54211 593 768 4.17E-58 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 568 770 2.1E-100 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 PIRSF PIRSF001174 1 773 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 Gene3D G3DSA:2.30.130.40 1 115 6.7E-32 T 12-10-2018 BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 Gene3D G3DSA:3.40.50.300 311 489 8.4E-69 T 12-10-2018 BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 SMART SM00382 346 491 1.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 SUPERFAMILY SSF52540 308 586 1.85E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 674 682 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 9 196 4.8E-39 T 12-10-2018 IPR003111 Lon, substrate-binding domain BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 Gene3D G3DSA:1.20.58.1480 119 243 3.5E-43 T 12-10-2018 BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 Gene3D G3DSA:3.30.230.10 591 774 8.3E-88 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 TIGRFAM TIGR00763 lon: endopeptidase La 10 769 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 SUPERFAMILY SSF88697 9 198 5.22E-45 T 12-10-2018 IPR015947 PUA-like superfamily BAMF_2627 bb22bdf2308a58542d75e766414249a6 774 Hamap MF_01973 Lon protease [lon]. 9 770 73.325 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 BAMF_1972 f170193ece4267aa43b8b1969e94ef4c 684 SMART SM00926 9 64 8.4E-18 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_1972 f170193ece4267aa43b8b1969e94ef4c 684 Gene3D G3DSA:3.30.2070.10 433 521 5.1E-152 T 12-10-2018 BAMF_1972 f170193ece4267aa43b8b1969e94ef4c 684 Pfam PF00384 Molybdopterin oxidoreductase 67 472 3.5E-65 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_1972 f170193ece4267aa43b8b1969e94ef4c 684 Gene3D G3DSA:2.20.25.90 4 69 5.0E-15 T 12-10-2018 BAMF_1972 f170193ece4267aa43b8b1969e94ef4c 684 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 418 435 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 BAMF_1972 f170193ece4267aa43b8b1969e94ef4c 684 SUPERFAMILY SSF50692 559 681 2.03E-28 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BAMF_1972 f170193ece4267aa43b8b1969e94ef4c 684 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 11 63 6.1E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_1972 f170193ece4267aa43b8b1969e94ef4c 684 Gene3D G3DSA:2.40.40.20 546 683 6.4E-25 T 12-10-2018 BAMF_1972 f170193ece4267aa43b8b1969e94ef4c 684 Gene3D G3DSA:3.40.50.740 78 478 5.1E-152 T 12-10-2018 BAMF_1972 f170193ece4267aa43b8b1969e94ef4c 684 SUPERFAMILY SSF53706 12 556 1.31E-159 T 12-10-2018 BAMF_1972 f170193ece4267aa43b8b1969e94ef4c 684 Pfam PF01568 Molydopterin dinucleotide binding domain 566 667 4.1E-18 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BAMF_1972 f170193ece4267aa43b8b1969e94ef4c 684 Gene3D G3DSA:3.40.228.10 145 544 5.1E-152 T 12-10-2018 BAMF_1322 4721290ca7f9511a554ab81a7c0b567f 305 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 1 304 9.9E-121 T 12-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 BAMF_1227 eaa8fb60f3760bee81d318012c8ec2fe 609 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 13 601 1.1E-231 T 12-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 BAMF_1227 eaa8fb60f3760bee81d318012c8ec2fe 609 SUPERFAMILY SSF55486 10 587 2.78E-144 T 12-10-2018 BAMF_1227 eaa8fb60f3760bee81d318012c8ec2fe 609 Pfam PF08439 Oligopeptidase F 120 189 2.3E-24 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain BAMF_1227 eaa8fb60f3760bee81d318012c8ec2fe 609 Gene3D G3DSA:1.10.287.830 187 233 1.4E-22 T 12-10-2018 BAMF_1227 eaa8fb60f3760bee81d318012c8ec2fe 609 Gene3D G3DSA:1.20.140.70 30 185 3.4E-56 T 12-10-2018 BAMF_1227 eaa8fb60f3760bee81d318012c8ec2fe 609 Pfam PF01432 Peptidase family M3 211 590 2.6E-86 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 BAMF_1227 eaa8fb60f3760bee81d318012c8ec2fe 609 Gene3D G3DSA:1.10.1370.20 234 608 1.6E-147 T 12-10-2018 BAMF_0495 f55180e6951968d99040240461b52c9d 543 Gene3D G3DSA:3.40.50.300 250 511 1.3E-51 T 12-10-2018 BAMF_0495 f55180e6951968d99040240461b52c9d 543 Gene3D G3DSA:3.40.50.300 5 85 1.1E-13 T 12-10-2018 BAMF_0495 f55180e6951968d99040240461b52c9d 543 Gene3D G3DSA:3.40.50.300 86 229 3.3E-31 T 12-10-2018 BAMF_0495 f55180e6951968d99040240461b52c9d 543 Pfam PF12848 ABC transporter 173 251 1.1E-9 T 12-10-2018 IPR032781 ABC-transporter extension domain BAMF_0495 f55180e6951968d99040240461b52c9d 543 SUPERFAMILY SSF52540 4 205 4.6E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0495 f55180e6951968d99040240461b52c9d 543 Pfam PF00005 ABC transporter 21 133 2.6E-16 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0495 f55180e6951968d99040240461b52c9d 543 SUPERFAMILY SSF52540 279 484 6.69E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0495 f55180e6951968d99040240461b52c9d 543 Pfam PF00005 ABC transporter 309 437 5.6E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0495 f55180e6951968d99040240461b52c9d 543 SMART SM00382 29 179 4.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0495 f55180e6951968d99040240461b52c9d 543 SMART SM00382 317 482 6.9E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 SUPERFAMILY SSF53784 1 315 1.28E-121 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 299 1.6E-144 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 Gene3D G3DSA:3.40.50.450 3 279 7.6E-123 T 12-10-2018 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 Pfam PF00365 Phosphofructokinase 3 275 1.6E-114 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 1.2E-89 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 1.2E-89 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 1.2E-89 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 1.2E-89 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 1.2E-89 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 1.2E-89 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 1.2E-89 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 1.2E-89 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 1.2E-89 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 12-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 Gene3D G3DSA:3.40.50.460 142 251 7.6E-123 T 12-10-2018 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 49.778 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 BAMF_2722 e18c3b9da585f1224fe7d2b017193e5f 319 PIRSF PIRSF000532 1 319 7.8E-126 T 12-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 BAMF_1768 3261f0676e26284a1fe90f5ad63441ca 519 SUPERFAMILY SSF54791 207 303 7.03E-16 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BAMF_1768 3261f0676e26284a1fe90f5ad63441ca 519 Pfam PF01966 HD domain 336 427 5.9E-19 T 12-10-2018 IPR006674 HD domain BAMF_1768 3261f0676e26284a1fe90f5ad63441ca 519 SMART SM00322 207 274 1.1E-6 T 12-10-2018 IPR004087 K Homology domain GO:0003676 BAMF_1768 3261f0676e26284a1fe90f5ad63441ca 519 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 7 519 1.6E-246 T 12-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 BAMF_1768 3261f0676e26284a1fe90f5ad63441ca 519 TIGRFAM TIGR00277 HDIG: HDIG domain 331 408 9.9E-27 T 12-10-2018 IPR006675 HDIG domain BAMF_1768 3261f0676e26284a1fe90f5ad63441ca 519 Pfam PF12072 Domain of unknown function (DUF3552) 5 204 5.5E-76 T 12-10-2018 IPR022711 Ribonuclease Y, N-terminal BAMF_1768 3261f0676e26284a1fe90f5ad63441ca 519 Pfam PF00013 KH domain 212 266 3.4E-6 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 BAMF_1768 3261f0676e26284a1fe90f5ad63441ca 519 Gene3D G3DSA:3.30.1370.10 207 304 1.2E-8 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BAMF_1768 3261f0676e26284a1fe90f5ad63441ca 519 SUPERFAMILY SSF109604 315 466 2.92E-32 T 12-10-2018 BAMF_1768 3261f0676e26284a1fe90f5ad63441ca 519 Hamap MF_00335 Ribonuclease Y [rny]. 4 519 25.917 T 12-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 BAMF_1768 3261f0676e26284a1fe90f5ad63441ca 519 SMART SM00471 331 437 5.3E-14 T 12-10-2018 IPR003607 HD/PDEase domain BAMF_1768 3261f0676e26284a1fe90f5ad63441ca 519 Gene3D G3DSA:1.10.3210.10 318 472 7.0E-20 T 12-10-2018 BAMF_2805 263012d2eb353e8761cc7d241374fd0d 512 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 9 489 4.8E-199 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 BAMF_2805 263012d2eb353e8761cc7d241374fd0d 512 ProSitePatterns PS01303 BCCT family of transporters signature. 312 321 - T 12-10-2018 IPR018093 BCCT transporter, conserved site BAMF_2805 263012d2eb353e8761cc7d241374fd0d 512 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 47 490 2.0E-183 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 BAMF_0163 aedce1bcf8a4ef77fddf24f12ec75553 327 Gene3D G3DSA:1.20.1530.20 8 315 5.0E-59 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily BAMF_0163 aedce1bcf8a4ef77fddf24f12ec75553 327 Pfam PF01758 Sodium Bile acid symporter family 46 215 2.7E-20 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 BAMF_0651 0c6dd316040b7a325e322593dfe7b090 580 Gene3D G3DSA:2.30.40.10 27 360 1.1E-78 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_0651 0c6dd316040b7a325e322593dfe7b090 580 SUPERFAMILY SSF51338 21 360 6.48E-13 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_0651 0c6dd316040b7a325e322593dfe7b090 580 Pfam PF01979 Amidohydrolase family 78 356 2.4E-23 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BAMF_0651 0c6dd316040b7a325e322593dfe7b090 580 SUPERFAMILY SSF51556 82 328 3.63E-11 T 12-10-2018 IPR032466 Metal-dependent hydrolase BAMF_0651 0c6dd316040b7a325e322593dfe7b090 580 Pfam PF13382 Adenine deaminase C-terminal domain 419 571 3.0E-35 T 12-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 BAMF_0651 0c6dd316040b7a325e322593dfe7b090 580 Gene3D G3DSA:3.20.20.140 82 325 1.1E-78 T 12-10-2018 BAMF_2475 c15804a4158543d6a79eb5efbded4cd0 243 Gene3D G3DSA:3.40.50.720 1 242 2.9E-72 T 12-10-2018 BAMF_2475 c15804a4158543d6a79eb5efbded4cd0 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 238 1.9E-56 T 12-10-2018 BAMF_2475 c15804a4158543d6a79eb5efbded4cd0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 1.5E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2475 c15804a4158543d6a79eb5efbded4cd0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.5E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2475 c15804a4158543d6a79eb5efbded4cd0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.5E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2475 c15804a4158543d6a79eb5efbded4cd0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.5E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2475 c15804a4158543d6a79eb5efbded4cd0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.5E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2475 c15804a4158543d6a79eb5efbded4cd0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.5E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2475 c15804a4158543d6a79eb5efbded4cd0 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 9.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2475 c15804a4158543d6a79eb5efbded4cd0 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 9.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2475 c15804a4158543d6a79eb5efbded4cd0 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 9.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2475 c15804a4158543d6a79eb5efbded4cd0 243 SUPERFAMILY SSF51735 2 241 6.96E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1426 257d6a9148a294071063a56bf43b03b7 251 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 229 2.4E-13 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_1426 257d6a9148a294071063a56bf43b03b7 251 TIGRFAM TIGR02895 spore_sigI: RNA polymerase sigma-I factor 22 245 1.1E-87 T 12-10-2018 IPR014244 RNA polymerase sigma-I type BAMF_1426 257d6a9148a294071063a56bf43b03b7 251 Gene3D G3DSA:1.10.1740.10 21 103 1.6E-9 T 12-10-2018 BAMF_1426 257d6a9148a294071063a56bf43b03b7 251 Pfam PF04542 Sigma-70 region 2 36 107 2.5E-11 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_1426 257d6a9148a294071063a56bf43b03b7 251 PIRSF PIRSF038953 7 251 1.2E-72 T 12-10-2018 IPR014244 RNA polymerase sigma-I type BAMF_1426 257d6a9148a294071063a56bf43b03b7 251 Hamap MF_02064 RNA polymerase sigma factor SigI [sigI]. 17 247 29.736 T 12-10-2018 IPR014244 RNA polymerase sigma-I type BAMF_1426 257d6a9148a294071063a56bf43b03b7 251 SUPERFAMILY SSF88946 23 104 2.98E-18 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_0344 22e95d0b3124256017b13d071aff11b9 382 SUPERFAMILY SSF48452 104 293 4.49E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_0344 22e95d0b3124256017b13d071aff11b9 382 SMART SM00028 142 175 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0344 22e95d0b3124256017b13d071aff11b9 382 SMART SM00028 263 296 0.25 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0344 22e95d0b3124256017b13d071aff11b9 382 SMART SM00028 183 216 12.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0344 22e95d0b3124256017b13d071aff11b9 382 SMART SM00028 223 256 2.7E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0344 22e95d0b3124256017b13d071aff11b9 382 Pfam PF13424 Tetratricopeptide repeat 223 294 2.3E-10 T 12-10-2018 BAMF_0344 22e95d0b3124256017b13d071aff11b9 382 Gene3D G3DSA:1.25.40.10 2 382 4.4E-134 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_1636 35550fad216b52a25a609ade1e29bcae 568 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 444 4.4E-166 T 12-10-2018 BAMF_1636 35550fad216b52a25a609ade1e29bcae 568 Gene3D G3DSA:1.10.8.50 167 236 1.1E-23 T 12-10-2018 BAMF_1636 35550fad216b52a25a609ade1e29bcae 568 Gene3D G3DSA:3.40.970.40 241 288 2.7E-20 T 12-10-2018 BAMF_1636 35550fad216b52a25a609ade1e29bcae 568 Pfam PF05670 Domain of unknown function (DUF814) 454 537 1.2E-29 T 12-10-2018 IPR008532 Domain of unknown function DUF814 BAMF_1636 35550fad216b52a25a609ade1e29bcae 568 Gene3D G3DSA:2.30.310.10 1 166 2.1E-68 T 12-10-2018 BAMF_0109 09ec2950100713d0fd387e2e67f982b8 82 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5 80 2.6E-15 T 12-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 BAMF_0109 09ec2950100713d0fd387e2e67f982b8 82 Hamap MF_00574 Putative ribosomal protein L7Ae-like. 2 82 23.354 T 12-10-2018 IPR023460 Ribosomal protein L7Ae, putative BAMF_0109 09ec2950100713d0fd387e2e67f982b8 82 SUPERFAMILY SSF55315 5 81 1.52E-19 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BAMF_0109 09ec2950100713d0fd387e2e67f982b8 82 Gene3D G3DSA:3.30.1330.30 1 82 5.8E-24 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BAMF_1854 0e6aad5f2f7a10fe3f1bd48433aef969 180 Gene3D G3DSA:3.40.630.30 2 179 8.4E-31 T 12-10-2018 BAMF_1854 0e6aad5f2f7a10fe3f1bd48433aef969 180 Pfam PF13302 Acetyltransferase (GNAT) domain 8 140 4.4E-18 T 12-10-2018 IPR000182 GNAT domain BAMF_1854 0e6aad5f2f7a10fe3f1bd48433aef969 180 SUPERFAMILY SSF55729 3 149 4.34E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_1983 86d6b0ffce58d51361b2a35f535876c7 110 SMART SM00418 27 105 2.7E-35 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_1983 86d6b0ffce58d51361b2a35f535876c7 110 Gene3D G3DSA:1.10.10.10 5 110 2.6E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1983 86d6b0ffce58d51361b2a35f535876c7 110 Pfam PF01022 Bacterial regulatory protein, arsR family 34 80 2.5E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_1983 86d6b0ffce58d51361b2a35f535876c7 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 59 3.5E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_1983 86d6b0ffce58d51361b2a35f535876c7 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 3.5E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_1983 86d6b0ffce58d51361b2a35f535876c7 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 44 3.5E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_1983 86d6b0ffce58d51361b2a35f535876c7 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 76 91 3.5E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_1983 86d6b0ffce58d51361b2a35f535876c7 110 SUPERFAMILY SSF46785 15 108 1.82E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3895 b940ad4b748e8a7855bc4b84dd6aa6cb 432 SUPERFAMILY SSF48208 34 285 1.78E-48 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BAMF_3895 b940ad4b748e8a7855bc4b84dd6aa6cb 432 Gene3D G3DSA:1.50.10.10 144 352 1.1E-11 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BAMF_2209 98f57232db2c2c51d44a1a6787e948b3 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 165 1.7E-31 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_2209 98f57232db2c2c51d44a1a6787e948b3 194 SUPERFAMILY SSF88946 3 90 3.34E-22 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_2209 98f57232db2c2c51d44a1a6787e948b3 194 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 30 61 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_2209 98f57232db2c2c51d44a1a6787e948b3 194 SUPERFAMILY SSF88659 92 166 4.67E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_2209 98f57232db2c2c51d44a1a6787e948b3 194 Gene3D G3DSA:1.10.1740.10 1 71 3.8E-24 T 12-10-2018 BAMF_2209 98f57232db2c2c51d44a1a6787e948b3 194 Pfam PF08281 Sigma-70, region 4 110 160 1.8E-11 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_2209 98f57232db2c2c51d44a1a6787e948b3 194 Gene3D G3DSA:1.10.10.10 89 167 8.5E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2209 98f57232db2c2c51d44a1a6787e948b3 194 Pfam PF04542 Sigma-70 region 2 8 74 1.3E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_1877 5550d1b59c010251aff6cc912acb8f5e 72 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 1 41 1.0E-6 T 12-10-2018 IPR005359 Protein with unknown function UPF0154 BAMF_1877 5550d1b59c010251aff6cc912acb8f5e 72 Hamap MF_00363 UPF0154 protein . 2 72 22.651 T 12-10-2018 IPR005359 Protein with unknown function UPF0154 BAMF_1877 5550d1b59c010251aff6cc912acb8f5e 72 Pfam PF03672 Uncharacterised protein family (UPF0154) 11 69 3.1E-31 T 12-10-2018 IPR005359 Protein with unknown function UPF0154 BAMF_1635 083980d9a8ce92722654013660cf05ba 514 Pfam PF09154 Domain of unknown function (DUF1939) 467 511 1.9E-7 T 12-10-2018 IPR015237 Alpha-amylase C-terminal, prokaryotic GO:0004553 BAMF_1635 083980d9a8ce92722654013660cf05ba 514 SMART SM00642 34 422 5.7E-74 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BAMF_1635 083980d9a8ce92722654013660cf05ba 514 SUPERFAMILY SSF51445 35 416 4.65E-109 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_1635 083980d9a8ce92722654013660cf05ba 514 Gene3D G3DSA:2.40.30.140 133 236 3.4E-168 T 12-10-2018 BAMF_1635 083980d9a8ce92722654013660cf05ba 514 Gene3D G3DSA:3.20.20.80 38 402 3.4E-168 T 12-10-2018 BAMF_1635 083980d9a8ce92722654013660cf05ba 514 PIRSF PIRSF001021 6 514 8.2E-241 T 12-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 BAMF_1635 083980d9a8ce92722654013660cf05ba 514 Gene3D G3DSA:2.60.40.1180 428 514 3.4E-34 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta BAMF_1635 083980d9a8ce92722654013660cf05ba 514 Pfam PF00128 Alpha amylase, catalytic domain 60 403 2.1E-28 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BAMF_1635 083980d9a8ce92722654013660cf05ba 514 SUPERFAMILY SSF51011 425 514 2.88E-34 T 12-10-2018 BAMF_0060 ef00f05cd76f545b81fd903da1f10a7d 100 Gene3D G3DSA:2.60.40.2000 25 82 1.2E-23 T 12-10-2018 IPR038705 YabP superfamily BAMF_0060 ef00f05cd76f545b81fd903da1f10a7d 100 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 16 100 1.0E-42 T 12-10-2018 IPR012504 Sporulation protein YabP BAMF_0060 ef00f05cd76f545b81fd903da1f10a7d 100 Pfam PF07873 YabP family 17 82 4.5E-21 T 12-10-2018 IPR022476 Sporulation protein YabP/YqfC BAMF_0060 ef00f05cd76f545b81fd903da1f10a7d 100 PIRSF PIRSF011576 1 100 5.1E-57 T 12-10-2018 IPR012504 Sporulation protein YabP BAMF_0060 ef00f05cd76f545b81fd903da1f10a7d 100 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 17 100 1.8E-33 T 12-10-2018 IPR012504 Sporulation protein YabP BAMF_0028 61d58d39b475a351eb6440d8d5979f42 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 207 31.022 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BAMF_0028 61d58d39b475a351eb6440d8d5979f42 212 Pfam PF02223 Thymidylate kinase 8 197 2.3E-58 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 BAMF_0028 61d58d39b475a351eb6440d8d5979f42 212 ProSitePatterns PS01331 Thymidylate kinase signature. 93 105 - T 12-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BAMF_0028 61d58d39b475a351eb6440d8d5979f42 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 197 5.4E-66 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BAMF_0028 61d58d39b475a351eb6440d8d5979f42 212 SUPERFAMILY SSF52540 1 210 9.0E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0028 61d58d39b475a351eb6440d8d5979f42 212 Gene3D G3DSA:3.40.50.300 1 211 3.4E-68 T 12-10-2018 BAMF_0433 86c6b4b1dfa8a9c7b00fc523ccd00bbc 361 Pfam PF01820 D-ala D-ala ligase N-terminus 5 124 1.1E-30 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_0433 86c6b4b1dfa8a9c7b00fc523ccd00bbc 361 Gene3D G3DSA:3.30.470.20 124 350 2.6E-84 T 12-10-2018 BAMF_0433 86c6b4b1dfa8a9c7b00fc523ccd00bbc 361 Gene3D G3DSA:3.40.50.20 1 123 1.1E-35 T 12-10-2018 BAMF_0433 86c6b4b1dfa8a9c7b00fc523ccd00bbc 361 SUPERFAMILY SSF56059 135 353 8.49E-65 T 12-10-2018 BAMF_0433 86c6b4b1dfa8a9c7b00fc523ccd00bbc 361 SUPERFAMILY SSF52440 2 134 5.28E-35 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BAMF_0433 86c6b4b1dfa8a9c7b00fc523ccd00bbc 361 PIRSF PIRSF039102 1 356 3.0E-117 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_0433 86c6b4b1dfa8a9c7b00fc523ccd00bbc 361 Gene3D G3DSA:3.30.1490.20 150 222 2.6E-84 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BAMF_0433 86c6b4b1dfa8a9c7b00fc523ccd00bbc 361 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 290 318 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_0433 86c6b4b1dfa8a9c7b00fc523ccd00bbc 361 Pfam PF07478 D-ala D-ala ligase C-terminus 142 345 3.6E-86 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_0433 86c6b4b1dfa8a9c7b00fc523ccd00bbc 361 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 102 113 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_0433 86c6b4b1dfa8a9c7b00fc523ccd00bbc 361 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 348 42.185 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_0433 86c6b4b1dfa8a9c7b00fc523ccd00bbc 361 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 347 1.4E-122 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_2870 7e6f0b5e1178554da1f7405c4bcdb572 193 Pfam PF03473 MOSC domain 62 176 2.2E-5 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 BAMF_2870 7e6f0b5e1178554da1f7405c4bcdb572 193 SUPERFAMILY SSF50800 2 179 7.85E-47 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BAMF_2870 7e6f0b5e1178554da1f7405c4bcdb572 193 Gene3D G3DSA:2.40.33.20 1 193 7.6E-78 T 12-10-2018 BAMF_1829 d5f314990490ce3d5b1002ad3dc70602 388 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 146 329 6.9E-31 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BAMF_1829 d5f314990490ce3d5b1002ad3dc70602 388 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 243 263 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BAMF_1829 d5f314990490ce3d5b1002ad3dc70602 388 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 135 1.9E-32 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BAMF_1829 d5f314990490ce3d5b1002ad3dc70602 388 TIGRFAM TIGR01312 XylB: xylulokinase 3 372 1.0E-138 T 12-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 BAMF_1829 d5f314990490ce3d5b1002ad3dc70602 388 SUPERFAMILY SSF53067 137 377 1.92E-66 T 12-10-2018 BAMF_1829 d5f314990490ce3d5b1002ad3dc70602 388 Gene3D G3DSA:3.30.420.40 1 136 1.3E-41 T 12-10-2018 BAMF_1829 d5f314990490ce3d5b1002ad3dc70602 388 SUPERFAMILY SSF53067 5 137 9.06E-36 T 12-10-2018 BAMF_1829 d5f314990490ce3d5b1002ad3dc70602 388 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 20 32 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BAMF_1829 d5f314990490ce3d5b1002ad3dc70602 388 Gene3D G3DSA:3.30.420.40 137 379 9.8E-76 T 12-10-2018 BAMF_1759 b47bcc00fe202285a3f9d0c360d4007a 428 SUPERFAMILY SSF63411 15 221 3.49E-42 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BAMF_1759 b47bcc00fe202285a3f9d0c360d4007a 428 Gene3D G3DSA:3.30.830.10 239 426 4.2E-38 T 12-10-2018 BAMF_1759 b47bcc00fe202285a3f9d0c360d4007a 428 Pfam PF05193 Peptidase M16 inactive domain 183 361 1.6E-17 T 12-10-2018 IPR007863 Peptidase M16, C-terminal BAMF_1759 b47bcc00fe202285a3f9d0c360d4007a 428 Pfam PF00675 Insulinase (Peptidase family M16) 65 176 6.5E-18 T 12-10-2018 IPR011765 Peptidase M16, N-terminal BAMF_1759 b47bcc00fe202285a3f9d0c360d4007a 428 Gene3D G3DSA:3.30.830.10 8 238 5.8E-60 T 12-10-2018 BAMF_1759 b47bcc00fe202285a3f9d0c360d4007a 428 SUPERFAMILY SSF63411 283 423 4.71E-18 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BAMF_3192 78db105b8f8c180f4287720409b11f61 743 Gene3D G3DSA:3.40.50.300 576 743 4.5E-57 T 12-10-2018 BAMF_3192 78db105b8f8c180f4287720409b11f61 743 Pfam PF13538 UvrD-like helicase C-terminal domain 676 724 1.4E-12 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain BAMF_3192 78db105b8f8c180f4287720409b11f61 743 Gene3D G3DSA:3.40.50.300 177 322 1.0E-9 T 12-10-2018 BAMF_3192 78db105b8f8c180f4287720409b11f61 743 SUPERFAMILY SSF52540 177 738 6.06E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3192 78db105b8f8c180f4287720409b11f61 743 Pfam PF13245 AAA domain 189 552 7.2E-9 T 12-10-2018 BAMF_3192 78db105b8f8c180f4287720409b11f61 743 Gene3D G3DSA:3.40.50.300 478 566 2.7E-9 T 12-10-2018 BAMF_3027 21b787526ecc094b9a1060619f220a01 148 Gene3D G3DSA:2.120.10.30 4 143 8.3E-29 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BAMF_3027 21b787526ecc094b9a1060619f220a01 148 SUPERFAMILY SSF82171 12 127 9.55E-24 T 12-10-2018 BAMF_3027 21b787526ecc094b9a1060619f220a01 148 Pfam PF07676 WD40-like Beta Propeller Repeat 59 93 4.6E-12 T 12-10-2018 IPR011659 WD40-like Beta Propeller BAMF_2375 e4da16010d7bf429c400418b8353b473 356 Gene3D G3DSA:3.30.450.90 1 110 4.5E-27 T 12-10-2018 BAMF_2375 e4da16010d7bf429c400418b8353b473 356 SUPERFAMILY SSF52540 4 308 4.6E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2375 e4da16010d7bf429c400418b8353b473 356 Pfam PF00437 Type II/IV secretion system protein 12 275 4.0E-77 T 12-10-2018 IPR001482 Type II/IV secretion system protein BAMF_2375 e4da16010d7bf429c400418b8353b473 356 Gene3D G3DSA:3.40.50.300 111 338 7.4E-65 T 12-10-2018 BAMF_2375 e4da16010d7bf429c400418b8353b473 356 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 204 218 - T 12-10-2018 IPR001482 Type II/IV secretion system protein BAMF_2375 e4da16010d7bf429c400418b8353b473 356 SMART SM00382 136 259 2.1E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1910 df5ff8d9307637afefb847cc58204d3e 511 SMART SM00606 375 510 6.6E-55 T 12-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 BAMF_1910 df5ff8d9307637afefb847cc58204d3e 511 Gene3D G3DSA:2.60.120.260 373 511 9.4E-49 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily BAMF_1910 df5ff8d9307637afefb847cc58204d3e 511 Gene3D G3DSA:2.115.10.20 30 372 5.4E-119 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BAMF_1910 df5ff8d9307637afefb847cc58204d3e 511 Pfam PF03422 Carbohydrate binding module (family 6) 383 510 8.1E-38 T 12-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 BAMF_1910 df5ff8d9307637afefb847cc58204d3e 511 SUPERFAMILY SSF49785 376 509 2.89E-30 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily BAMF_1910 df5ff8d9307637afefb847cc58204d3e 511 SUPERFAMILY SSF75005 37 382 3.14E-55 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BAMF_1910 df5ff8d9307637afefb847cc58204d3e 511 Pfam PF04616 Glycosyl hydrolases family 43 44 359 2.6E-31 T 12-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 BAMF_0417 334c5c9fb858bf432ff825c0cff1d3a9 113 Gene3D G3DSA:2.60.120.10 2 106 4.9E-27 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_0417 334c5c9fb858bf432ff825c0cff1d3a9 113 SUPERFAMILY SSF51182 12 102 8.91E-20 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BAMF_0417 334c5c9fb858bf432ff825c0cff1d3a9 113 Pfam PF07883 Cupin domain 41 88 4.3E-13 T 12-10-2018 IPR013096 Cupin 2, conserved barrel BAMF_2557 ededc59577591706062c0f9da10ad78f 179 SUPERFAMILY SSF50346 109 157 1.23E-5 T 12-10-2018 IPR011033 PRC-barrel-like superfamily BAMF_0778 d85b85daa1201570673b713179f5a251 865 SMART SM00220 226 569 1.1E-4 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BAMF_0778 d85b85daa1201570673b713179f5a251 865 SUPERFAMILY SSF56112 224 433 4.78E-26 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BAMF_0778 d85b85daa1201570673b713179f5a251 865 Pfam PF00069 Protein kinase domain 238 393 8.2E-17 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BAMF_0778 d85b85daa1201570673b713179f5a251 865 Pfam PF05147 Lanthionine synthetase C-like protein 658 700 1.0E-5 T 12-10-2018 IPR007822 Lanthionine synthetase C-like BAMF_0778 d85b85daa1201570673b713179f5a251 865 SUPERFAMILY SSF158745 513 847 7.85E-26 T 12-10-2018 BAMF_0778 d85b85daa1201570673b713179f5a251 865 Gene3D G3DSA:1.10.510.10 313 419 5.7E-20 T 12-10-2018 BAMF_0778 d85b85daa1201570673b713179f5a251 865 SMART SM01260 520 847 2.0E-5 T 12-10-2018 IPR007822 Lanthionine synthetase C-like BAMF_0778 d85b85daa1201570673b713179f5a251 865 Gene3D G3DSA:3.30.200.20 215 312 5.7E-20 T 12-10-2018 BAMF_2381 587eed44ff296689e12d34205c646143 207 SUPERFAMILY SSF56281 7 203 1.97E-50 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_2381 587eed44ff296689e12d34205c646143 207 Pfam PF00753 Metallo-beta-lactamase superfamily 4 186 7.5E-33 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_2381 587eed44ff296689e12d34205c646143 207 SMART SM00849 7 186 2.9E-40 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_2381 587eed44ff296689e12d34205c646143 207 Gene3D G3DSA:3.60.15.10 1 206 2.7E-61 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_0529 5d93c79fd97117c4142198a46dec1c4e 229 Gene3D G3DSA:3.30.420.40 3 216 2.8E-49 T 12-10-2018 BAMF_0529 5d93c79fd97117c4142198a46dec1c4e 229 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 1.8E-52 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 BAMF_0529 5d93c79fd97117c4142198a46dec1c4e 229 SUPERFAMILY SSF53067 108 214 1.14E-13 T 12-10-2018 BAMF_0529 5d93c79fd97117c4142198a46dec1c4e 229 Gene3D G3DSA:3.30.420.40 95 189 2.8E-49 T 12-10-2018 BAMF_0529 5d93c79fd97117c4142198a46dec1c4e 229 Pfam PF00814 Glycoprotease family 32 224 1.5E-34 T 12-10-2018 IPR000905 Gcp-like domain BAMF_0529 5d93c79fd97117c4142198a46dec1c4e 229 SUPERFAMILY SSF53067 1 102 1.25E-26 T 12-10-2018 BAMF_1330 8d949efeed1c58785e7b4b0e86b4c824 125 Gene3D G3DSA:2.30.29.50 1 125 2.0E-50 T 12-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily BAMF_1330 8d949efeed1c58785e7b4b0e86b4c824 125 SUPERFAMILY SSF50729 6 124 9.02E-42 T 12-10-2018 BAMF_1330 8d949efeed1c58785e7b4b0e86b4c824 125 Pfam PF08000 Bacterial PH domain 3 123 4.6E-49 T 12-10-2018 IPR012544 Bacterial Pleckstrin homology domain BAMF_2811 541502410c8fbab1c6a90a27e0f6eaaf 432 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 169 - T 12-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 BAMF_2811 541502410c8fbab1c6a90a27e0f6eaaf 432 Pfam PF02056 Family 4 glycosyl hydrolase 3 184 1.4E-74 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_2811 541502410c8fbab1c6a90a27e0f6eaaf 432 Gene3D G3DSA:3.90.1820.20 2 428 4.1E-142 T 12-10-2018 BAMF_2811 541502410c8fbab1c6a90a27e0f6eaaf 432 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 194 404 1.4E-63 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 BAMF_2811 541502410c8fbab1c6a90a27e0f6eaaf 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 190 202 1.8E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_2811 541502410c8fbab1c6a90a27e0f6eaaf 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 1.8E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_2811 541502410c8fbab1c6a90a27e0f6eaaf 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 1.8E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_2811 541502410c8fbab1c6a90a27e0f6eaaf 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 3 18 1.8E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_2811 541502410c8fbab1c6a90a27e0f6eaaf 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 94 107 1.8E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_2811 541502410c8fbab1c6a90a27e0f6eaaf 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 72 88 1.8E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_2811 541502410c8fbab1c6a90a27e0f6eaaf 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 1.8E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_2811 541502410c8fbab1c6a90a27e0f6eaaf 432 SUPERFAMILY SSF56327 168 431 2.07E-71 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BAMF_2811 541502410c8fbab1c6a90a27e0f6eaaf 432 SUPERFAMILY SSF51735 3 167 2.91E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1382 61799ca18c2c213cd9b37d5cc36b658f 315 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 37 89 3.0E-18 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BAMF_1382 61799ca18c2c213cd9b37d5cc36b658f 315 Gene3D G3DSA:1.10.3720.10 101 315 2.8E-20 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1382 61799ca18c2c213cd9b37d5cc36b658f 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 315 5.6E-29 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_1382 61799ca18c2c213cd9b37d5cc36b658f 315 SUPERFAMILY SSF161098 107 314 2.62E-25 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 SUPERFAMILY SSF52540 3 208 6.64E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 Pfam PF14492 Elongation Factor G, domain II 330 379 9.8E-7 T 12-10-2018 BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 Pfam PF00679 Elongation factor G C-terminus 399 479 5.6E-25 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 146 1.6E-22 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 Gene3D G3DSA:3.40.50.300 4 200 4.1E-67 T 12-10-2018 BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 Gene3D G3DSA:3.30.70.870 308 592 7.7E-129 T 12-10-2018 BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 SMART SM00838 397 485 5.4E-5 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 Gene3D G3DSA:3.30.70.240 391 484 7.7E-129 T 12-10-2018 BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 Gene3D G3DSA:2.40.30.10 201 301 2.3E-34 T 12-10-2018 BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 Gene3D G3DSA:2.40.50.250 485 601 7.7E-129 T 12-10-2018 BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 PRINTS PR00315 GTP-binding elongation factor signature 89 100 3.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 PRINTS PR00315 GTP-binding elongation factor signature 125 134 3.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 PRINTS PR00315 GTP-binding elongation factor signature 9 22 3.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 PRINTS PR00315 GTP-binding elongation factor signature 53 61 3.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 PRINTS PR00315 GTP-binding elongation factor signature 73 83 3.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 Pfam PF03144 Elongation factor Tu domain 2 221 291 6.6E-14 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 Pfam PF00009 Elongation factor Tu GTP binding domain 6 197 2.5E-56 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 SUPERFAMILY SSF54980 304 389 1.22E-15 T 12-10-2018 IPR035647 EF-G domain III/V-like BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 601 1.5E-290 T 12-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 SUPERFAMILY SSF54980 400 515 1.1E-29 T 12-10-2018 IPR035647 EF-G domain III/V-like BAMF_1551 1eb48868b81ab441825d26db0f818e3b 612 SUPERFAMILY SSF50447 154 301 1.29E-33 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BAMF_3704 3efe997f188074c2ab3187f6b64c0de1 314 Gene3D G3DSA:2.60.120.10 227 310 6.2E-21 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_3704 3efe997f188074c2ab3187f6b64c0de1 314 Gene3D G3DSA:2.60.120.10 1 226 1.2E-93 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_3704 3efe997f188074c2ab3187f6b64c0de1 314 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 101 310 2.3E-46 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BAMF_3704 3efe997f188074c2ab3187f6b64c0de1 314 SUPERFAMILY SSF51182 1 310 4.75E-105 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BAMF_3704 3efe997f188074c2ab3187f6b64c0de1 314 Pfam PF01238 Phosphomannose isomerase type I 5 199 1.6E-37 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BAMF_3704 3efe997f188074c2ab3187f6b64c0de1 314 PIRSF PIRSF036894 2 312 6.9E-128 T 12-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 BAMF_1327 d5b008d957cb3b1b39cd32dd9c1a0cc4 376 Pfam PF13424 Tetratricopeptide repeat 197 252 4.5E-9 T 12-10-2018 BAMF_1327 d5b008d957cb3b1b39cd32dd9c1a0cc4 376 SUPERFAMILY SSF48452 103 305 6.32E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_1327 d5b008d957cb3b1b39cd32dd9c1a0cc4 376 SMART SM00028 334 367 280.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_1327 d5b008d957cb3b1b39cd32dd9c1a0cc4 376 SMART SM00028 259 292 130.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_1327 d5b008d957cb3b1b39cd32dd9c1a0cc4 376 SMART SM00028 220 253 4.8E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_1327 d5b008d957cb3b1b39cd32dd9c1a0cc4 376 Gene3D G3DSA:1.25.40.10 1 376 1.8E-125 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_3525 8e76c052a07c8ad6d3a14761479efcf2 127 Pfam PF03899 ATP synthase I chain 10 105 5.4E-20 T 12-10-2018 IPR005598 ATP synthase protein I BAMF_3525 8e76c052a07c8ad6d3a14761479efcf2 127 ProDom PD020811 ATP SYNTHASE I ION HYDROLASE SUBUNIT I CF0 MEMBRANE HYDROGEN 23 127 9.0E-45 T 12-10-2018 BAMF_3534 323771b486f7b9903c0985ab8ba1e876 226 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 40 165 3.0E-49 T 12-10-2018 IPR014202 Sporulation stage II, protein R BAMF_3534 323771b486f7b9903c0985ab8ba1e876 226 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 3 170 4.7E-71 T 12-10-2018 IPR014202 Sporulation stage II, protein R BAMF_3526 1debbf0c9b7d9304dfe45b724aa07bdc 239 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 33 239 48.014 T 12-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BAMF_3526 1debbf0c9b7d9304dfe45b724aa07bdc 239 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 33 239 2.0E-92 T 12-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BAMF_3526 1debbf0c9b7d9304dfe45b724aa07bdc 239 Gene3D G3DSA:3.40.50.2020 22 239 1.9E-83 T 12-10-2018 BAMF_3526 1debbf0c9b7d9304dfe45b724aa07bdc 239 Pfam PF14681 Uracil phosphoribosyltransferase 36 238 1.7E-75 T 12-10-2018 BAMF_3526 1debbf0c9b7d9304dfe45b724aa07bdc 239 SUPERFAMILY SSF53271 34 237 2.1E-71 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BAMF_0463 e5d1583b24181ab0f8d4ba3a51e79748 462 Pfam PF00155 Aminotransferase class I and II 131 448 2.1E-20 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_0463 e5d1583b24181ab0f8d4ba3a51e79748 462 Gene3D G3DSA:1.10.10.10 13 88 1.5E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0463 e5d1583b24181ab0f8d4ba3a51e79748 462 Gene3D G3DSA:3.90.1150.10 102 454 1.9E-52 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_0463 e5d1583b24181ab0f8d4ba3a51e79748 462 Gene3D G3DSA:3.40.640.10 140 356 1.9E-52 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_0463 e5d1583b24181ab0f8d4ba3a51e79748 462 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 87 1.2E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0463 e5d1583b24181ab0f8d4ba3a51e79748 462 SMART SM00345 28 87 6.5E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0463 e5d1583b24181ab0f8d4ba3a51e79748 462 SUPERFAMILY SSF53383 98 461 1.6E-62 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_0463 e5d1583b24181ab0f8d4ba3a51e79748 462 SUPERFAMILY SSF46785 21 91 7.43E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0556 ff604c0fd875d39f1df00d74c5a37f69 150 SUPERFAMILY SSF159006 2 145 7.32E-27 T 12-10-2018 BAMF_0556 ff604c0fd875d39f1df00d74c5a37f69 150 Pfam PF09643 YopX protein 38 144 5.2E-20 T 12-10-2018 IPR019096 YopX protein BAMF_0556 ff604c0fd875d39f1df00d74c5a37f69 150 TIGRFAM TIGR01671 phage_TIGR01671: phage conserved hypothetical protein TIGR01671 48 145 3.4E-15 T 12-10-2018 IPR010024 Conserved hypothetical protein CHP1671 BAMF_0556 ff604c0fd875d39f1df00d74c5a37f69 150 Gene3D G3DSA:2.30.30.290 60 150 9.1E-21 T 12-10-2018 IPR023385 YopX-like, C-terminal BAMF_0047 42a18da2f2344f4d0d84ad0ebedeadd7 285 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 9 74 7.0E-32 T 12-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 BAMF_0047 42a18da2f2344f4d0d84ad0ebedeadd7 285 SUPERFAMILY SSF53271 93 264 1.56E-41 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BAMF_0047 42a18da2f2344f4d0d84ad0ebedeadd7 285 Pfam PF00156 Phosphoribosyl transferase domain 109 244 2.3E-21 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BAMF_0047 42a18da2f2344f4d0d84ad0ebedeadd7 285 Pfam PF09182 Bacterial purine repressor, N-terminal 4 73 3.2E-31 T 12-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 BAMF_0047 42a18da2f2344f4d0d84ad0ebedeadd7 285 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 3 270 7.0E-136 T 12-10-2018 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 BAMF_0047 42a18da2f2344f4d0d84ad0ebedeadd7 285 Gene3D G3DSA:1.10.10.10 1 73 1.3E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0047 42a18da2f2344f4d0d84ad0ebedeadd7 285 Gene3D G3DSA:3.40.50.2020 74 274 8.9E-65 T 12-10-2018 BAMF_0047 42a18da2f2344f4d0d84ad0ebedeadd7 285 SUPERFAMILY SSF46785 2 73 1.2E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0226 d7ddee58c0aeac676094fac6c5b90dd0 315 SMART SM00448 1 114 1.3E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0226 d7ddee58c0aeac676094fac6c5b90dd0 315 Pfam PF00072 Response regulator receiver domain 4 114 5.3E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0226 d7ddee58c0aeac676094fac6c5b90dd0 315 Gene3D G3DSA:3.40.50.12740 1 166 7.2E-22 T 12-10-2018 BAMF_0226 d7ddee58c0aeac676094fac6c5b90dd0 315 Pfam PF08664 YcbB domain 160 296 1.3E-45 T 12-10-2018 IPR013972 YcbB domain BAMF_0226 d7ddee58c0aeac676094fac6c5b90dd0 315 SUPERFAMILY SSF52172 2 139 1.1E-22 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_1038 9476e0cd5b5830f61e0f516c61527443 276 Gene3D G3DSA:3.10.350.10 24 76 1.2E-15 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1038 9476e0cd5b5830f61e0f516c61527443 276 Gene3D G3DSA:3.10.350.10 83 136 8.5E-20 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1038 9476e0cd5b5830f61e0f516c61527443 276 Gene3D G3DSA:3.90.1720.10 151 276 1.8E-33 T 12-10-2018 BAMF_1038 9476e0cd5b5830f61e0f516c61527443 276 Pfam PF01476 LysM domain 29 69 1.0E-12 T 12-10-2018 IPR018392 LysM domain BAMF_1038 9476e0cd5b5830f61e0f516c61527443 276 Pfam PF01476 LysM domain 88 129 1.4E-15 T 12-10-2018 IPR018392 LysM domain BAMF_1038 9476e0cd5b5830f61e0f516c61527443 276 SMART SM00257 27 70 1.1E-14 T 12-10-2018 IPR018392 LysM domain BAMF_1038 9476e0cd5b5830f61e0f516c61527443 276 SMART SM00257 87 130 1.6E-18 T 12-10-2018 IPR018392 LysM domain BAMF_1038 9476e0cd5b5830f61e0f516c61527443 276 SUPERFAMILY SSF54001 156 276 1.08E-33 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BAMF_1038 9476e0cd5b5830f61e0f516c61527443 276 SUPERFAMILY SSF54106 26 70 2.88E-10 T 12-10-2018 BAMF_1038 9476e0cd5b5830f61e0f516c61527443 276 Pfam PF00877 NlpC/P60 family 174 274 6.0E-28 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BAMF_1038 9476e0cd5b5830f61e0f516c61527443 276 SUPERFAMILY SSF54106 86 130 3.53E-12 T 12-10-2018 BAMF_2551 93a69a41346bdf76a6438c5d026fae8f 242 Gene3D G3DSA:3.40.50.300 1 240 1.8E-78 T 12-10-2018 BAMF_2551 93a69a41346bdf76a6438c5d026fae8f 242 PIRSF PIRSF039085 1 241 1.0E-117 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BAMF_2551 93a69a41346bdf76a6438c5d026fae8f 242 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_2551 93a69a41346bdf76a6438c5d026fae8f 242 SMART SM00382 26 213 3.5E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2551 93a69a41346bdf76a6438c5d026fae8f 242 SUPERFAMILY SSF52540 1 234 7.14E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2551 93a69a41346bdf76a6438c5d026fae8f 242 Pfam PF00005 ABC transporter 17 165 2.4E-38 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0066 899ed0ebca4af5644173ed476d2233c7 333 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 34 55 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 BAMF_0066 899ed0ebca4af5644173ed476d2233c7 333 Pfam PF00069 Protein kinase domain 28 235 1.0E-14 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BAMF_0066 899ed0ebca4af5644173ed476d2233c7 333 SUPERFAMILY SSF56112 17 235 2.6E-24 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BAMF_0066 899ed0ebca4af5644173ed476d2233c7 333 SMART SM00220 28 265 4.0E-6 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BAMF_0066 899ed0ebca4af5644173ed476d2233c7 333 Gene3D G3DSA:1.10.510.10 111 263 7.2E-24 T 12-10-2018 BAMF_0066 899ed0ebca4af5644173ed476d2233c7 333 Gene3D G3DSA:3.30.200.20 12 110 7.2E-24 T 12-10-2018 BAMF_3746 7817847351a2f0fd55c300c8e8738f47 303 Pfam PF00892 EamA-like transporter family 10 140 2.5E-20 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BAMF_3746 7817847351a2f0fd55c300c8e8738f47 303 Pfam PF00892 EamA-like transporter family 154 285 2.9E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BAMF_3746 7817847351a2f0fd55c300c8e8738f47 303 SUPERFAMILY SSF103481 189 289 5.62E-12 T 12-10-2018 BAMF_3746 7817847351a2f0fd55c300c8e8738f47 303 SUPERFAMILY SSF103481 41 141 2.48E-12 T 12-10-2018 BAMF_2171 e8410705fda74641b12b5bee8a0658be 362 Gene3D G3DSA:1.20.1090.10 173 358 2.2E-49 T 12-10-2018 BAMF_2171 e8410705fda74641b12b5bee8a0658be 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 359 63.901 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BAMF_2171 e8410705fda74641b12b5bee8a0658be 362 Gene3D G3DSA:3.40.50.1970 1 172 7.3E-59 T 12-10-2018 BAMF_2171 e8410705fda74641b12b5bee8a0658be 362 SUPERFAMILY SSF56796 7 356 2.36E-94 T 12-10-2018 BAMF_2171 e8410705fda74641b12b5bee8a0658be 362 PIRSF PIRSF001455 3 362 1.1E-98 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BAMF_2171 e8410705fda74641b12b5bee8a0658be 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 348 8.4E-116 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BAMF_2171 e8410705fda74641b12b5bee8a0658be 362 Pfam PF01761 3-dehydroquinate synthase 68 323 1.3E-94 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BAMF_2138 a8af8c97db595663b9ae9f9feb555c78 161 Gene3D G3DSA:3.10.450.40 99 161 2.5E-27 T 12-10-2018 BAMF_2138 a8af8c97db595663b9ae9f9feb555c78 161 SUPERFAMILY SSF54403 35 99 5.19E-16 T 12-10-2018 BAMF_2138 a8af8c97db595663b9ae9f9feb555c78 161 Gene3D G3DSA:3.10.450.40 27 98 7.9E-30 T 12-10-2018 BAMF_2138 a8af8c97db595663b9ae9f9feb555c78 161 SUPERFAMILY SSF54403 99 160 3.83E-16 T 12-10-2018 BAMF_2138 a8af8c97db595663b9ae9f9feb555c78 161 Pfam PF03413 Peptidase propeptide and YPEB domain 100 158 6.5E-5 T 12-10-2018 IPR025711 PepSY domain BAMF_1589 c0a4851291f5f36118bed9d4614d6fbf 117 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 34 116 9.2E-22 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BAMF_1589 c0a4851291f5f36118bed9d4614d6fbf 117 Hamap MF_00910 Cell division protein FtsL [ftsL]. 34 116 13.489 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BAMF_1589 c0a4851291f5f36118bed9d4614d6fbf 117 Pfam PF04977 Septum formation initiator 41 106 1.4E-6 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC BAMF_3637 25e85bf1641b5c6cd40f6b166ac21129 460 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 153 439 6.9E-91 T 12-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 BAMF_3637 25e85bf1641b5c6cd40f6b166ac21129 460 Gene3D G3DSA:3.30.1360.60 1 77 1.5E-27 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BAMF_3637 25e85bf1641b5c6cd40f6b166ac21129 460 Pfam PF00367 phosphotransferase system, EIIB 8 40 1.8E-13 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BAMF_3637 25e85bf1641b5c6cd40f6b166ac21129 460 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 450 4.3E-190 T 12-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 BAMF_3637 25e85bf1641b5c6cd40f6b166ac21129 460 Pfam PF02378 Phosphotransferase system, EIIC 110 394 5.9E-49 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BAMF_3637 25e85bf1641b5c6cd40f6b166ac21129 460 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 111 3.3E-19 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BAMF_3637 25e85bf1641b5c6cd40f6b166ac21129 460 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BAMF_3637 25e85bf1641b5c6cd40f6b166ac21129 460 SUPERFAMILY SSF55604 5 80 5.49E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BAMF_0725 54ec36ea1b24cff803b0803f1f419f80 217 TIGRFAM TIGR01076 sortase_fam: sortase 82 206 4.6E-16 T 12-10-2018 IPR005754 Sortase family BAMF_0725 54ec36ea1b24cff803b0803f1f419f80 217 Pfam PF04203 Sortase family 84 204 1.6E-21 T 12-10-2018 IPR005754 Sortase family BAMF_0725 54ec36ea1b24cff803b0803f1f419f80 217 SUPERFAMILY SSF63817 72 206 1.7E-36 T 12-10-2018 IPR023365 Sortase domain superfamily BAMF_0725 54ec36ea1b24cff803b0803f1f419f80 217 Gene3D G3DSA:2.40.260.10 51 215 1.2E-37 T 12-10-2018 IPR023365 Sortase domain superfamily BAMF_0826 dce18e24449539f3c5a53a248ce6a666 154 Pfam PF06114 IrrE N-terminal-like domain 31 122 4.7E-7 T 12-10-2018 IPR010359 IrrE N-terminal-like domain BAMF_2723 68c2d2f554b6dd3ebb2e26c0c0327eaf 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 3.5E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2723 68c2d2f554b6dd3ebb2e26c0c0327eaf 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 3.5E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2723 68c2d2f554b6dd3ebb2e26c0c0327eaf 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 3.5E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2723 68c2d2f554b6dd3ebb2e26c0c0327eaf 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 3.5E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2723 68c2d2f554b6dd3ebb2e26c0c0327eaf 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 3.5E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2723 68c2d2f554b6dd3ebb2e26c0c0327eaf 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 3.5E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2723 68c2d2f554b6dd3ebb2e26c0c0327eaf 325 Gene3D G3DSA:3.90.226.10 2 316 1.2E-121 T 12-10-2018 BAMF_2723 68c2d2f554b6dd3ebb2e26c0c0327eaf 325 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 49.161 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2723 68c2d2f554b6dd3ebb2e26c0c0327eaf 325 SUPERFAMILY SSF52096 6 313 8.04E-99 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_2723 68c2d2f554b6dd3ebb2e26c0c0327eaf 325 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 147 1.3E-65 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2723 68c2d2f554b6dd3ebb2e26c0c0327eaf 325 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 4.5E-165 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_0451 66c78974ced2f7bda33f7720111152ba 200 SMART SM00332 6 196 9.2E-4 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_0451 66c78974ced2f7bda33f7720111152ba 200 Gene3D G3DSA:3.60.40.10 1 198 1.9E-45 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_0451 66c78974ced2f7bda33f7720111152ba 200 SUPERFAMILY SSF81606 15 195 3.92E-13 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_0451 66c78974ced2f7bda33f7720111152ba 200 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 36 158 1.2E-13 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_0451 66c78974ced2f7bda33f7720111152ba 200 SMART SM00331 9 198 2.7E-45 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_1674 dd041cfc358430c8f5ca939f23f88f18 243 Gene3D G3DSA:1.10.1270.20 166 243 4.7E-34 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BAMF_1674 dd041cfc358430c8f5ca939f23f88f18 243 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 243 114.462 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BAMF_1674 dd041cfc358430c8f5ca939f23f88f18 243 SUPERFAMILY SSF75217 1 242 3.07E-103 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases BAMF_1674 dd041cfc358430c8f5ca939f23f88f18 243 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 3.1E-77 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BAMF_1674 dd041cfc358430c8f5ca939f23f88f18 243 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 235 8.2E-109 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BAMF_1674 dd041cfc358430c8f5ca939f23f88f18 243 PIRSF PIRSF000386 1 242 3.0E-104 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BAMF_1674 dd041cfc358430c8f5ca939f23f88f18 243 Gene3D G3DSA:3.40.1280.10 1 165 9.4E-70 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 210 227 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 Pfam PF01472 PUA domain 281 351 1.1E-8 T 12-10-2018 IPR002478 PUA domain GO:0003723 BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 SUPERFAMILY SSF53633 8 258 1.03E-67 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 SMART SM00359 281 355 4.9E-7 T 12-10-2018 IPR002478 PUA domain GO:0003723 BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 8 262 37.593 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 SUPERFAMILY SSF88697 281 344 9.94E-10 T 12-10-2018 IPR015947 PUA-like superfamily BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 8 355 3.7E-120 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 PIRSF PIRSF000729 3 369 1.1E-134 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 Gene3D G3DSA:2.30.130.10 270 366 2.5E-15 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 Pfam PF00696 Amino acid kinase family 8 234 9.3E-45 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 Gene3D G3DSA:3.40.1160.10 2 263 2.0E-85 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 PRINTS PR00474 Glutamate 5-kinase family signature 212 232 1.1E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 PRINTS PR00474 Glutamate 5-kinase family signature 45 59 1.1E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 PRINTS PR00474 Glutamate 5-kinase family signature 79 107 1.1E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 PRINTS PR00474 Glutamate 5-kinase family signature 119 140 1.1E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BAMF_1953 4009c1a397195d6435c92a91f03a5e95 372 PRINTS PR00474 Glutamate 5-kinase family signature 151 178 1.1E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BAMF_0368 a09436c2c70ece93e79a3b61e6c9bba7 373 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 149 161 - T 12-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BAMF_0368 a09436c2c70ece93e79a3b61e6c9bba7 373 Gene3D G3DSA:1.10.1040.10 204 372 7.1E-58 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BAMF_0368 a09436c2c70ece93e79a3b61e6c9bba7 373 SUPERFAMILY SSF48179 201 358 1.5E-41 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_0368 a09436c2c70ece93e79a3b61e6c9bba7 373 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 147 356 1.9E-54 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 BAMF_0368 a09436c2c70ece93e79a3b61e6c9bba7 373 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 2 122 1.3E-26 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 BAMF_0368 a09436c2c70ece93e79a3b61e6c9bba7 373 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 371 40.71 T 12-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BAMF_0368 a09436c2c70ece93e79a3b61e6c9bba7 373 SUPERFAMILY SSF51735 3 199 2.0E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0368 a09436c2c70ece93e79a3b61e6c9bba7 373 Gene3D G3DSA:3.40.50.720 2 202 3.9E-75 T 12-10-2018 BAMF_0368 a09436c2c70ece93e79a3b61e6c9bba7 373 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 1.3E-20 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BAMF_0368 a09436c2c70ece93e79a3b61e6c9bba7 373 PRINTS PR00084 Mannitol dehydrogenase signature 113 126 1.3E-20 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BAMF_0368 a09436c2c70ece93e79a3b61e6c9bba7 373 PRINTS PR00084 Mannitol dehydrogenase signature 149 162 1.3E-20 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BAMF_0368 a09436c2c70ece93e79a3b61e6c9bba7 373 PRINTS PR00084 Mannitol dehydrogenase signature 167 182 1.3E-20 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BAMF_1984 1b785f453766591ab673723127d42dd0 206 Gene3D G3DSA:1.10.530.10 33 188 6.9E-46 T 12-10-2018 BAMF_1984 1b785f453766591ab673723127d42dd0 206 SUPERFAMILY SSF53955 39 145 1.86E-8 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BAMF_1984 1b785f453766591ab673723127d42dd0 206 Pfam PF13702 Lysozyme-like 35 188 1.6E-57 T 12-10-2018 BAMF_2215 d8e2f3644dfcb5b24471cdb76899ba77 244 Pfam PF00849 RNA pseudouridylate synthase 62 196 3.1E-25 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_2215 d8e2f3644dfcb5b24471cdb76899ba77 244 Gene3D G3DSA:3.30.70.1560 128 215 7.3E-28 T 12-10-2018 BAMF_2215 d8e2f3644dfcb5b24471cdb76899ba77 244 SMART SM00363 2 63 7.1E-16 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_2215 d8e2f3644dfcb5b24471cdb76899ba77 244 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BAMF_2215 d8e2f3644dfcb5b24471cdb76899ba77 244 SUPERFAMILY SSF55174 2 67 1.94E-16 T 12-10-2018 BAMF_2215 d8e2f3644dfcb5b24471cdb76899ba77 244 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 226 1.3E-52 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BAMF_2215 d8e2f3644dfcb5b24471cdb76899ba77 244 Gene3D G3DSA:3.10.290.10 1 54 2.8E-21 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BAMF_2215 d8e2f3644dfcb5b24471cdb76899ba77 244 Pfam PF01479 S4 domain 2 48 7.6E-16 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_2215 d8e2f3644dfcb5b24471cdb76899ba77 244 Gene3D G3DSA:3.30.70.580 55 127 7.2E-28 T 12-10-2018 BAMF_2215 d8e2f3644dfcb5b24471cdb76899ba77 244 SUPERFAMILY SSF55120 46 238 2.06E-46 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_2458 9426d38f5e727f87a9dfab89f8bb75eb 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 97 2.1E-22 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BAMF_2458 9426d38f5e727f87a9dfab89f8bb75eb 273 Gene3D G3DSA:3.40.50.720 1 161 3.3E-35 T 12-10-2018 BAMF_2458 9426d38f5e727f87a9dfab89f8bb75eb 273 Gene3D G3DSA:1.10.3730.10 162 262 5.8E-15 T 12-10-2018 BAMF_2458 9426d38f5e727f87a9dfab89f8bb75eb 273 PIRSF PIRSF000193 1 265 5.6E-78 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BAMF_2458 9426d38f5e727f87a9dfab89f8bb75eb 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 220 242 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BAMF_2458 9426d38f5e727f87a9dfab89f8bb75eb 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 261 3.9E-17 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BAMF_2458 9426d38f5e727f87a9dfab89f8bb75eb 273 SUPERFAMILY SSF51735 2 156 6.43E-25 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2458 9426d38f5e727f87a9dfab89f8bb75eb 273 SUPERFAMILY SSF48179 162 262 2.38E-18 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_2087 c50f631379c5ba37d6cad7bf39d27918 558 Pfam PF00920 Dehydratase family 34 553 1.6E-228 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BAMF_2087 c50f631379c5ba37d6cad7bf39d27918 558 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BAMF_2087 c50f631379c5ba37d6cad7bf39d27918 558 SUPERFAMILY SSF143975 3 376 4.18E-141 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BAMF_2087 c50f631379c5ba37d6cad7bf39d27918 558 SUPERFAMILY SSF52016 377 556 1.33E-62 T 12-10-2018 BAMF_2087 c50f631379c5ba37d6cad7bf39d27918 558 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 17 557 7.5E-271 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BAMF_2087 c50f631379c5ba37d6cad7bf39d27918 558 Gene3D G3DSA:3.50.30.80 377 528 2.0E-54 T 12-10-2018 BAMF_2087 c50f631379c5ba37d6cad7bf39d27918 558 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BAMF_2087 c50f631379c5ba37d6cad7bf39d27918 558 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 557 48.019 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BAMF_3032 7f79e0f999ca534d8a20b82b6710d508 166 Pfam PF04608 Phosphatidylglycerophosphatase A 23 159 1.2E-18 T 12-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 BAMF_3032 7f79e0f999ca534d8a20b82b6710d508 166 PIRSF PIRSF019587 5 166 1.3E-83 T 12-10-2018 IPR026038 Putative phosphatidylglycerophosphatase BAMF_3032 7f79e0f999ca534d8a20b82b6710d508 166 SUPERFAMILY SSF101307 13 162 8.11E-55 T 12-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 BAMF_3032 7f79e0f999ca534d8a20b82b6710d508 166 Gene3D G3DSA:1.10.3760.10 1 166 7.3E-76 T 12-10-2018 BAMF_3144 34a4f8f3536e8cdfc15c53c6d4e9c4a7 462 Pfam PF00206 Lyase 11 340 2.3E-121 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal BAMF_3144 34a4f8f3536e8cdfc15c53c6d4e9c4a7 462 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 460 89.844 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BAMF_3144 34a4f8f3536e8cdfc15c53c6d4e9c4a7 462 Gene3D G3DSA:1.20.200.10 137 405 1.0E-115 T 12-10-2018 BAMF_3144 34a4f8f3536e8cdfc15c53c6d4e9c4a7 462 Gene3D G3DSA:1.10.40.30 406 462 1.2E-28 T 12-10-2018 BAMF_3144 34a4f8f3536e8cdfc15c53c6d4e9c4a7 462 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 1.3E-34 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_3144 34a4f8f3536e8cdfc15c53c6d4e9c4a7 462 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 1.3E-34 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_3144 34a4f8f3536e8cdfc15c53c6d4e9c4a7 462 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 1.3E-34 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_3144 34a4f8f3536e8cdfc15c53c6d4e9c4a7 462 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 1.3E-34 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_3144 34a4f8f3536e8cdfc15c53c6d4e9c4a7 462 Gene3D G3DSA:1.10.275.10 4 136 1.4E-54 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal BAMF_3144 34a4f8f3536e8cdfc15c53c6d4e9c4a7 462 PRINTS PR00145 Argininosuccinate lyase family signature 173 193 1.3E-5 T 12-10-2018 BAMF_3144 34a4f8f3536e8cdfc15c53c6d4e9c4a7 462 PRINTS PR00145 Argininosuccinate lyase family signature 315 331 1.3E-5 T 12-10-2018 BAMF_3144 34a4f8f3536e8cdfc15c53c6d4e9c4a7 462 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BAMF_3144 34a4f8f3536e8cdfc15c53c6d4e9c4a7 462 SUPERFAMILY SSF48557 2 458 7.23E-156 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 BAMF_3144 34a4f8f3536e8cdfc15c53c6d4e9c4a7 462 Pfam PF10415 Fumarase C C-terminus 406 459 1.3E-26 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BAMF_3144 34a4f8f3536e8cdfc15c53c6d4e9c4a7 462 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 458 7.1E-251 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BAMF_1879 a9a56819462cd6f1540d9d05bb647244 234 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 8 213 5.4E-67 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 BAMF_2026 ca9aae44b2613be5303d42cb486f1cdc 203 Pfam PF00881 Nitroreductase family 10 183 2.2E-28 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BAMF_2026 ca9aae44b2613be5303d42cb486f1cdc 203 Gene3D G3DSA:3.40.109.10 1 203 2.2E-49 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BAMF_2026 ca9aae44b2613be5303d42cb486f1cdc 203 SUPERFAMILY SSF55469 2 202 6.67E-52 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BAMF_0144 bb141308cb8a2d6af3a1fd029d1e177b 120 Gene3D G3DSA:3.90.1030.10 1 120 2.9E-51 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0144 bb141308cb8a2d6af3a1fd029d1e177b 120 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 120 29.088 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0144 bb141308cb8a2d6af3a1fd029d1e177b 120 TIGRFAM TIGR00059 L17: ribosomal protein bL17 2 120 2.9E-50 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0144 bb141308cb8a2d6af3a1fd029d1e177b 120 Pfam PF01196 Ribosomal protein L17 16 120 5.1E-40 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0144 bb141308cb8a2d6af3a1fd029d1e177b 120 SUPERFAMILY SSF64263 2 120 4.19E-46 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0144 bb141308cb8a2d6af3a1fd029d1e177b 120 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 SUPERFAMILY SSF52540 386 689 3.72E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 Pfam PF02151 UvrB/uvrC motif 325 359 4.0E-5 T 12-10-2018 IPR001943 UVR domain GO:0005515 BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 115 246 3.5E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 205 217 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 608 679 2.2E-22 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 Gene3D G3DSA:3.40.50.300 367 606 9.2E-90 T 12-10-2018 BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 471 489 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 Gene3D G3DSA:1.10.8.60 608 698 1.1E-22 T 12-10-2018 BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 Gene3D G3DSA:3.40.50.300 60 252 2.0E-66 T 12-10-2018 BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 SMART SM00382 110 254 1.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 SMART SM00382 437 609 3.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 SUPERFAMILY SSF52540 72 323 3.0E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 Pfam PF07724 AAA domain (Cdc48 subfamily) 436 602 6.3E-52 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 Gene3D G3DSA:1.10.8.60 253 340 3.5E-28 T 12-10-2018 BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 486 504 4.1E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 441 459 4.1E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 515 533 4.1E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 548 562 4.1E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BAMF_1449 c58a19f0afbd82f38e47a2631aa7ec24 698 SMART SM01086 608 695 1.1E-29 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BAMF_1950 be45018fa84c780e7680b8d38ab3f680 493 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 153 475 6.3E-25 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BAMF_1950 be45018fa84c780e7680b8d38ab3f680 493 Gene3D G3DSA:3.50.50.60 289 488 3.2E-15 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1950 be45018fa84c780e7680b8d38ab3f680 493 Gene3D G3DSA:3.50.50.60 153 279 5.3E-35 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1950 be45018fa84c780e7680b8d38ab3f680 493 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 493 5.2E-258 T 12-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 BAMF_1950 be45018fa84c780e7680b8d38ab3f680 493 Gene3D G3DSA:1.10.1060.10 8 152 1.5E-19 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BAMF_1950 be45018fa84c780e7680b8d38ab3f680 493 SUPERFAMILY SSF51971 151 421 3.53E-62 T 12-10-2018 BAMF_1950 be45018fa84c780e7680b8d38ab3f680 493 SUPERFAMILY SSF46548 2 163 3.4E-36 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BAMF_1950 be45018fa84c780e7680b8d38ab3f680 493 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 140 1.3E-21 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 BAMF_1950 be45018fa84c780e7680b8d38ab3f680 493 PRINTS PR00419 Adrenodoxin reductase family signature 295 309 7.4E-25 T 12-10-2018 BAMF_1950 be45018fa84c780e7680b8d38ab3f680 493 PRINTS PR00419 Adrenodoxin reductase family signature 154 176 7.4E-25 T 12-10-2018 BAMF_1950 be45018fa84c780e7680b8d38ab3f680 493 PRINTS PR00419 Adrenodoxin reductase family signature 219 229 7.4E-25 T 12-10-2018 BAMF_1950 be45018fa84c780e7680b8d38ab3f680 493 PRINTS PR00419 Adrenodoxin reductase family signature 177 190 7.4E-25 T 12-10-2018 BAMF_3523 b6963ad52c5360a9a725016ca58df5b7 70 PRINTS PR00124 ATP synthase C subunit signature 43 68 5.6E-20 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3523 b6963ad52c5360a9a725016ca58df5b7 70 PRINTS PR00124 ATP synthase C subunit signature 5 24 5.6E-20 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3523 b6963ad52c5360a9a725016ca58df5b7 70 PRINTS PR00124 ATP synthase C subunit signature 26 41 5.6E-20 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3523 b6963ad52c5360a9a725016ca58df5b7 70 Pfam PF00137 ATP synthase subunit C 4 66 9.4E-15 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 BAMF_3523 b6963ad52c5360a9a725016ca58df5b7 70 SUPERFAMILY SSF81333 3 69 1.83E-19 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily BAMF_3523 b6963ad52c5360a9a725016ca58df5b7 70 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 14 69 1.0E-20 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BAMF_3523 b6963ad52c5360a9a725016ca58df5b7 70 Hamap MF_01396 ATP synthase subunit c [atpH]. 3 68 15.863 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3523 b6963ad52c5360a9a725016ca58df5b7 70 Gene3D G3DSA:1.20.20.10 1 68 1.6E-27 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3523 b6963ad52c5360a9a725016ca58df5b7 70 ProSitePatterns PS00605 ATP synthase c subunit signature. 33 54 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3306 e4d557fadbeb7c6b94a13edd7cbd9176 410 Gene3D G3DSA:1.20.1250.20 197 396 1.4E-63 T 12-10-2018 BAMF_3306 e4d557fadbeb7c6b94a13edd7cbd9176 410 Gene3D G3DSA:1.20.1250.20 4 196 8.1E-39 T 12-10-2018 BAMF_3306 e4d557fadbeb7c6b94a13edd7cbd9176 410 PRINTS PR00174 LacY proton/sugar symporter family signature 207 235 1.5E-87 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 BAMF_3306 e4d557fadbeb7c6b94a13edd7cbd9176 410 PRINTS PR00174 LacY proton/sugar symporter family signature 308 327 1.5E-87 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 BAMF_3306 e4d557fadbeb7c6b94a13edd7cbd9176 410 PRINTS PR00174 LacY proton/sugar symporter family signature 253 274 1.5E-87 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 BAMF_3306 e4d557fadbeb7c6b94a13edd7cbd9176 410 PRINTS PR00174 LacY proton/sugar symporter family signature 277 303 1.5E-87 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 BAMF_3306 e4d557fadbeb7c6b94a13edd7cbd9176 410 PRINTS PR00174 LacY proton/sugar symporter family signature 102 124 1.5E-87 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 BAMF_3306 e4d557fadbeb7c6b94a13edd7cbd9176 410 PRINTS PR00174 LacY proton/sugar symporter family signature 144 162 1.5E-87 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 BAMF_3306 e4d557fadbeb7c6b94a13edd7cbd9176 410 PRINTS PR00174 LacY proton/sugar symporter family signature 339 359 1.5E-87 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 BAMF_3306 e4d557fadbeb7c6b94a13edd7cbd9176 410 PRINTS PR00174 LacY proton/sugar symporter family signature 67 96 1.5E-87 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 BAMF_3306 e4d557fadbeb7c6b94a13edd7cbd9176 410 Pfam PF01306 LacY proton/sugar symporter 6 398 7.0E-140 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 BAMF_3306 e4d557fadbeb7c6b94a13edd7cbd9176 410 SUPERFAMILY SSF103473 9 398 3.66E-39 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3306 e4d557fadbeb7c6b94a13edd7cbd9176 410 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 7 393 6.4E-141 T 12-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 BAMF_3634 32d79d0ed865bbdaa75ed9a52fee79d7 270 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 9.7E-89 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BAMF_3634 32d79d0ed865bbdaa75ed9a52fee79d7 270 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 1.2E-86 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_3634 32d79d0ed865bbdaa75ed9a52fee79d7 270 Gene3D G3DSA:3.40.1190.20 1 269 1.9E-94 T 12-10-2018 IPR029056 Ribokinase-like BAMF_3634 32d79d0ed865bbdaa75ed9a52fee79d7 270 SUPERFAMILY SSF53613 1 264 2.96E-75 T 12-10-2018 IPR029056 Ribokinase-like BAMF_1288 b775818c397d2ef5156baf08d4b5a40d 304 Gene3D G3DSA:3.40.710.10 37 303 4.4E-81 T 12-10-2018 BAMF_1288 b775818c397d2ef5156baf08d4b5a40d 304 Pfam PF13354 Beta-lactamase enzyme family 71 276 9.7E-35 T 12-10-2018 BAMF_1288 b775818c397d2ef5156baf08d4b5a40d 304 ProSitePatterns PS00146 Beta-lactamase class-A active site. 83 98 - T 12-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 BAMF_1288 b775818c397d2ef5156baf08d4b5a40d 304 SUPERFAMILY SSF56601 49 300 1.82E-76 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_1288 b775818c397d2ef5156baf08d4b5a40d 304 PRINTS PR00118 Beta-lactamase class A signature 81 98 5.1E-70 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BAMF_1288 b775818c397d2ef5156baf08d4b5a40d 304 PRINTS PR00118 Beta-lactamase class A signature 219 234 5.1E-70 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BAMF_1288 b775818c397d2ef5156baf08d4b5a40d 304 PRINTS PR00118 Beta-lactamase class A signature 121 146 5.1E-70 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BAMF_1288 b775818c397d2ef5156baf08d4b5a40d 304 PRINTS PR00118 Beta-lactamase class A signature 236 251 5.1E-70 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BAMF_1288 b775818c397d2ef5156baf08d4b5a40d 304 PRINTS PR00118 Beta-lactamase class A signature 157 181 5.1E-70 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BAMF_1288 b775818c397d2ef5156baf08d4b5a40d 304 PRINTS PR00118 Beta-lactamase class A signature 50 74 5.1E-70 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BAMF_1288 b775818c397d2ef5156baf08d4b5a40d 304 PRINTS PR00118 Beta-lactamase class A signature 183 208 5.1E-70 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 BAMF_3688 8dddb465b2fdd65946f82675538bddc4 110 PIRSF PIRSF000699 1 105 7.2E-38 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BAMF_3688 8dddb465b2fdd65946f82675538bddc4 110 Gene3D G3DSA:1.20.58.280 1 106 2.0E-39 T 12-10-2018 BAMF_3688 8dddb465b2fdd65946f82675538bddc4 110 SUPERFAMILY SSF46973 2 101 5.1E-37 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 BAMF_3688 8dddb465b2fdd65946f82675538bddc4 110 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 100 2.1E-36 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BAMF_0237 75d11466403378f1aad80ae0da1ed94a 583 Gene3D G3DSA:2.60.40.380 57 165 1.6E-43 T 12-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 BAMF_0237 75d11466403378f1aad80ae0da1ed94a 583 Pfam PF09423 PhoD-like phosphatase 175 512 1.1E-118 T 12-10-2018 IPR018946 Alkaline phosphatase D-related BAMF_0237 75d11466403378f1aad80ae0da1ed94a 583 Gene3D G3DSA:3.60.21.70 166 583 2.5E-183 T 12-10-2018 IPR038607 PhoD-like superfamily BAMF_0237 75d11466403378f1aad80ae0da1ed94a 583 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 67 162 3.0E-33 T 12-10-2018 IPR032093 Phospholipase D, N-terminal BAMF_0237 75d11466403378f1aad80ae0da1ed94a 583 SUPERFAMILY SSF56300 168 515 5.87E-42 T 12-10-2018 BAMF_0217 8c4dc18caefdb0bd772e093a35db76b2 417 Gene3D G3DSA:1.10.3860.10 1 411 7.8E-119 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BAMF_0217 8c4dc18caefdb0bd772e093a35db76b2 417 SUPERFAMILY SSF118215 6 396 1.1E-109 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BAMF_0217 8c4dc18caefdb0bd772e093a35db76b2 417 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 1.3E-33 T 12-10-2018 BAMF_0217 8c4dc18caefdb0bd772e093a35db76b2 417 PRINTS PR00173 Glutamate-aspartate symporter signature 349 369 1.3E-33 T 12-10-2018 BAMF_0217 8c4dc18caefdb0bd772e093a35db76b2 417 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.3E-33 T 12-10-2018 BAMF_0217 8c4dc18caefdb0bd772e093a35db76b2 417 PRINTS PR00173 Glutamate-aspartate symporter signature 140 162 1.3E-33 T 12-10-2018 BAMF_0217 8c4dc18caefdb0bd772e093a35db76b2 417 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 1.3E-33 T 12-10-2018 BAMF_0217 8c4dc18caefdb0bd772e093a35db76b2 417 PRINTS PR00173 Glutamate-aspartate symporter signature 70 95 1.3E-33 T 12-10-2018 BAMF_0217 8c4dc18caefdb0bd772e093a35db76b2 417 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 1.3E-33 T 12-10-2018 BAMF_0217 8c4dc18caefdb0bd772e093a35db76b2 417 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 1.3E-33 T 12-10-2018 BAMF_0217 8c4dc18caefdb0bd772e093a35db76b2 417 Pfam PF00375 Sodium:dicarboxylate symporter family 6 395 1.0E-115 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BAMF_0217 8c4dc18caefdb0bd772e093a35db76b2 417 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 32 47 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BAMF_0217 8c4dc18caefdb0bd772e093a35db76b2 417 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 290 313 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BAMF_1690 3849fc7572c258e18987d3299e6f4c57 150 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 100 146 2.7E-10 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BAMF_1690 3849fc7572c258e18987d3299e6f4c57 150 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BAMF_1690 3849fc7572c258e18987d3299e6f4c57 150 Pfam PF00460 Flagella basal body rod protein 7 37 5.3E-12 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BAMF_1690 3849fc7572c258e18987d3299e6f4c57 150 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 150 2.8E-51 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 BAMF_3377 ffa45abb1764c23876b9939b48f62bb5 328 PRINTS PR00207 Flagellin signature 35 52 5.3E-22 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BAMF_3377 ffa45abb1764c23876b9939b48f62bb5 328 PRINTS PR00207 Flagellin signature 109 132 5.3E-22 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BAMF_3377 ffa45abb1764c23876b9939b48f62bb5 328 PRINTS PR00207 Flagellin signature 74 93 5.3E-22 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BAMF_3377 ffa45abb1764c23876b9939b48f62bb5 328 SUPERFAMILY SSF64518 1 327 1.02E-98 T 12-10-2018 BAMF_3377 ffa45abb1764c23876b9939b48f62bb5 328 Gene3D G3DSA:1.10.8.410 279 327 8.7E-29 T 12-10-2018 BAMF_3377 ffa45abb1764c23876b9939b48f62bb5 328 Gene3D G3DSA:1.20.1330.10 48 190 1.6E-47 T 12-10-2018 BAMF_3377 ffa45abb1764c23876b9939b48f62bb5 328 Gene3D G3DSA:1.20.1330.10 191 278 5.9E-18 T 12-10-2018 BAMF_3377 ffa45abb1764c23876b9939b48f62bb5 328 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 1.8E-43 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BAMF_3377 ffa45abb1764c23876b9939b48f62bb5 328 Pfam PF00700 Bacterial flagellin C-terminal helical region 242 326 2.8E-29 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BAMF_2275 eaf2ce20857417e50396f7afb31fdc5f 258 Gene3D G3DSA:3.40.50.720 1 257 2.4E-64 T 12-10-2018 BAMF_2275 eaf2ce20857417e50396f7afb31fdc5f 258 SUPERFAMILY SSF51735 1 249 6.0E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2275 eaf2ce20857417e50396f7afb31fdc5f 258 Pfam PF00106 short chain dehydrogenase 7 190 9.3E-52 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2275 eaf2ce20857417e50396f7afb31fdc5f 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.6E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2275 eaf2ce20857417e50396f7afb31fdc5f 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.6E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2275 eaf2ce20857417e50396f7afb31fdc5f 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.6E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2275 eaf2ce20857417e50396f7afb31fdc5f 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_2275 eaf2ce20857417e50396f7afb31fdc5f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 4.4E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2275 eaf2ce20857417e50396f7afb31fdc5f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.4E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2275 eaf2ce20857417e50396f7afb31fdc5f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.4E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2275 eaf2ce20857417e50396f7afb31fdc5f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 4.4E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2275 eaf2ce20857417e50396f7afb31fdc5f 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.4E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2597 ac73b37fa889ef1572e3e33a8fb48a39 149 Gene3D G3DSA:3.30.70.260 69 145 1.1E-7 T 12-10-2018 BAMF_2597 ac73b37fa889ef1572e3e33a8fb48a39 149 Pfam PF01842 ACT domain 72 135 1.6E-8 T 12-10-2018 IPR002912 ACT domain BAMF_2597 ac73b37fa889ef1572e3e33a8fb48a39 149 SUPERFAMILY SSF55021 72 145 1.55E-10 T 12-10-2018 BAMF_2597 ac73b37fa889ef1572e3e33a8fb48a39 149 PIRSF PIRSF025624 1 148 5.3E-63 T 12-10-2018 IPR008310 UPF0735 ACT domain-containing protein BAMF_2597 ac73b37fa889ef1572e3e33a8fb48a39 149 Hamap MF_00707 UPF0735 ACT domain-containing protein . 4 148 31.946 T 12-10-2018 IPR008310 UPF0735 ACT domain-containing protein BAMF_0179 0cd4b77a6d14f76dc2d0acc4eb9212bd 476 Gene3D G3DSA:2.170.120.30 323 420 1.4E-16 T 12-10-2018 BAMF_0179 0cd4b77a6d14f76dc2d0acc4eb9212bd 476 Pfam PF07949 YbbR-like protein 143 228 1.7E-15 T 12-10-2018 IPR012505 YbbR-like BAMF_0179 0cd4b77a6d14f76dc2d0acc4eb9212bd 476 Pfam PF07949 YbbR-like protein 55 135 5.6E-11 T 12-10-2018 IPR012505 YbbR-like BAMF_0179 0cd4b77a6d14f76dc2d0acc4eb9212bd 476 Pfam PF07949 YbbR-like protein 239 316 4.1E-15 T 12-10-2018 IPR012505 YbbR-like BAMF_0179 0cd4b77a6d14f76dc2d0acc4eb9212bd 476 Gene3D G3DSA:2.170.120.30 42 145 6.3E-28 T 12-10-2018 BAMF_0179 0cd4b77a6d14f76dc2d0acc4eb9212bd 476 Gene3D G3DSA:2.170.120.40 146 231 3.6E-9 T 12-10-2018 BAMF_0179 0cd4b77a6d14f76dc2d0acc4eb9212bd 476 Gene3D G3DSA:2.170.120.40 234 319 1.3E-17 T 12-10-2018 BAMF_0754 8bacf1f6dc895901cc33ccf7a3265133 362 SUPERFAMILY SSF47413 26 85 2.53E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_0754 8bacf1f6dc895901cc33ccf7a3265133 362 Gene3D G3DSA:1.10.260.40 18 84 5.4E-21 T 12-10-2018 BAMF_0754 8bacf1f6dc895901cc33ccf7a3265133 362 SMART SM00354 27 97 3.1E-28 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_0754 8bacf1f6dc895901cc33ccf7a3265133 362 Pfam PF00356 Bacterial regulatory proteins, lacI family 29 72 9.3E-16 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_0754 8bacf1f6dc895901cc33ccf7a3265133 362 SUPERFAMILY SSF53822 87 357 1.58E-76 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BAMF_0754 8bacf1f6dc895901cc33ccf7a3265133 362 Pfam PF13377 Periplasmic binding protein-like domain 195 356 3.6E-38 T 12-10-2018 BAMF_0754 8bacf1f6dc895901cc33ccf7a3265133 362 Gene3D G3DSA:3.40.50.2300 187 353 2.8E-79 T 12-10-2018 BAMF_0754 8bacf1f6dc895901cc33ccf7a3265133 362 Gene3D G3DSA:3.40.50.2300 88 348 2.8E-79 T 12-10-2018 BAMF_0083 767ccb4801e3f11d11a9a1a1cee09c99 185 Pfam PF02151 UvrB/uvrC motif 145 174 3.9E-6 T 12-10-2018 IPR001943 UVR domain GO:0005515 BAMF_0083 767ccb4801e3f11d11a9a1a1cee09c99 185 PIRSF PIRSF015034 1 182 2.4E-74 T 12-10-2018 IPR025542 YacH protein BAMF_0083 767ccb4801e3f11d11a9a1a1cee09c99 185 Gene3D G3DSA:4.10.860.10 136 185 6.8E-6 T 12-10-2018 BAMF_0083 767ccb4801e3f11d11a9a1a1cee09c99 185 SUPERFAMILY SSF46600 140 175 4.84E-6 T 12-10-2018 IPR036876 UVR domain superfamily BAMF_1742 b4755ba84db4ef7155161f01f7eb61f5 319 SUPERFAMILY SSF88713 110 313 3.34E-58 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BAMF_1742 b4755ba84db4ef7155161f01f7eb61f5 319 TIGRFAM TIGR02873 spore_ylxY: probable sporulation protein, polysaccharide deacetylase family 46 313 5.1E-144 T 12-10-2018 IPR014228 Sporulation protein, polysaccharide deacetylase, YlxY BAMF_1742 b4755ba84db4ef7155161f01f7eb61f5 319 Pfam PF01522 Polysaccharide deacetylase 126 245 1.4E-26 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BAMF_1742 b4755ba84db4ef7155161f01f7eb61f5 319 Gene3D G3DSA:3.20.20.370 82 316 3.3E-58 T 12-10-2018 BAMF_0486 f064567228680ce1ff5b3cc9e85e5f39 294 SUPERFAMILY SSF103481 43 131 2.75E-7 T 12-10-2018 BAMF_0486 f064567228680ce1ff5b3cc9e85e5f39 294 Pfam PF00892 EamA-like transporter family 7 128 3.1E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BAMF_0486 f064567228680ce1ff5b3cc9e85e5f39 294 Pfam PF00892 EamA-like transporter family 149 277 1.5E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BAMF_0486 f064567228680ce1ff5b3cc9e85e5f39 294 SUPERFAMILY SSF103481 183 280 4.97E-7 T 12-10-2018 BAMF_1753 7e8928a7921899e389f6ef9353400983 781 Gene3D G3DSA:1.10.10.10 702 770 5.1E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1753 7e8928a7921899e389f6ef9353400983 781 SMART SM00382 453 635 1.2E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1753 7e8928a7921899e389f6ef9353400983 781 SUPERFAMILY SSF52540 391 686 7.79E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1753 7e8928a7921899e389f6ef9353400983 781 Pfam PF01580 FtsK/SpoIIIE family 418 614 6.5E-65 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 BAMF_1753 7e8928a7921899e389f6ef9353400983 781 Pfam PF09397 Ftsk gamma domain 712 771 2.7E-29 T 12-10-2018 IPR018541 FtsK gamma domain BAMF_1753 7e8928a7921899e389f6ef9353400983 781 SUPERFAMILY SSF46785 710 776 9.52E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1753 7e8928a7921899e389f6ef9353400983 781 SMART SM00843 709 774 2.4E-40 T 12-10-2018 IPR018541 FtsK gamma domain BAMF_1753 7e8928a7921899e389f6ef9353400983 781 Gene3D G3DSA:3.30.980.40 310 413 1.8E-38 T 12-10-2018 BAMF_1753 7e8928a7921899e389f6ef9353400983 781 Gene3D G3DSA:3.40.50.300 415 700 2.3E-111 T 12-10-2018 BAMF_2655 378d97d5d8f0e0bea7e67203d1356e90 104 SUPERFAMILY SSF52833 3 104 4.02E-37 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_2655 378d97d5d8f0e0bea7e67203d1356e90 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 103 8.5E-40 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BAMF_2655 378d97d5d8f0e0bea7e67203d1356e90 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BAMF_2655 378d97d5d8f0e0bea7e67203d1356e90 104 Gene3D G3DSA:3.40.30.10 1 104 5.6E-37 T 12-10-2018 BAMF_2655 378d97d5d8f0e0bea7e67203d1356e90 104 PIRSF PIRSF000077 1 104 8.8E-43 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BAMF_2655 378d97d5d8f0e0bea7e67203d1356e90 104 PRINTS PR00421 Thioredoxin family signature 20 28 1.3E-8 T 12-10-2018 BAMF_2655 378d97d5d8f0e0bea7e67203d1356e90 104 PRINTS PR00421 Thioredoxin family signature 68 79 1.3E-8 T 12-10-2018 BAMF_2655 378d97d5d8f0e0bea7e67203d1356e90 104 PRINTS PR00421 Thioredoxin family signature 28 37 1.3E-8 T 12-10-2018 BAMF_2655 378d97d5d8f0e0bea7e67203d1356e90 104 Pfam PF00085 Thioredoxin 3 103 9.9E-31 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 BAMF_1057 14ac2247971fb34b485e1621092bd7f4 371 Gene3D G3DSA:3.30.70.100 247 345 2.7E-18 T 12-10-2018 BAMF_1057 14ac2247971fb34b485e1621092bd7f4 371 Pfam PF00924 Mechanosensitive ion channel 139 341 2.0E-64 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BAMF_1057 14ac2247971fb34b485e1621092bd7f4 371 SUPERFAMILY SSF50182 181 247 3.27E-18 T 12-10-2018 IPR010920 LSM domain superfamily BAMF_1057 14ac2247971fb34b485e1621092bd7f4 371 Gene3D G3DSA:2.30.30.60 197 246 1.4E-13 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BAMF_1057 14ac2247971fb34b485e1621092bd7f4 371 SUPERFAMILY SSF82689 248 352 6.02E-19 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BAMF_1057 14ac2247971fb34b485e1621092bd7f4 371 SUPERFAMILY SSF82861 96 180 1.83E-11 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BAMF_0524 68d3663ff3cb7edd11b43f367b8b2836 155 SUPERFAMILY SSF55961 17 151 1.27E-33 T 12-10-2018 BAMF_0524 68d3663ff3cb7edd11b43f367b8b2836 155 Gene3D G3DSA:3.30.530.20 12 155 1.0E-34 T 12-10-2018 IPR023393 START-like domain superfamily BAMF_0524 68d3663ff3cb7edd11b43f367b8b2836 155 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 29 150 2.2E-9 T 12-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like BAMF_3674 11229840528085dfcc8745f8baed37e6 411 SUPERFAMILY SSF88697 17 85 2.15E-17 T 12-10-2018 IPR015947 PUA-like superfamily BAMF_3674 11229840528085dfcc8745f8baed37e6 411 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 118 392 1.4E-36 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 BAMF_3674 11229840528085dfcc8745f8baed37e6 411 Gene3D G3DSA:2.30.130.10 17 86 3.9E-24 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 BAMF_3674 11229840528085dfcc8745f8baed37e6 411 SUPERFAMILY SSF53335 94 408 5.75E-67 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_3674 11229840528085dfcc8745f8baed37e6 411 Gene3D G3DSA:3.30.750.80 88 193 8.9E-34 T 12-10-2018 BAMF_3674 11229840528085dfcc8745f8baed37e6 411 Gene3D G3DSA:3.40.50.150 196 411 4.6E-60 T 12-10-2018 BAMF_3674 11229840528085dfcc8745f8baed37e6 411 SMART SM00359 18 103 5.2E-6 T 12-10-2018 IPR002478 PUA domain GO:0003723 BAMF_1597 2ae66a4f71aff847bf5cf9d6c2fb367f 303 Gene3D G3DSA:3.30.43.10 1 88 3.1E-30 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 BAMF_1597 2ae66a4f71aff847bf5cf9d6c2fb367f 303 Gene3D G3DSA:3.90.78.10 217 303 8.6E-35 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_1597 2ae66a4f71aff847bf5cf9d6c2fb367f 303 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 201 299 4.1E-29 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_1597 2ae66a4f71aff847bf5cf9d6c2fb367f 303 SUPERFAMILY SSF56194 197 300 3.14E-36 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_1597 2ae66a4f71aff847bf5cf9d6c2fb367f 303 Pfam PF01565 FAD binding domain 35 164 1.1E-24 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BAMF_1597 2ae66a4f71aff847bf5cf9d6c2fb367f 303 Gene3D G3DSA:3.30.465.10 89 216 6.6E-49 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BAMF_1597 2ae66a4f71aff847bf5cf9d6c2fb367f 303 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 303 90.252 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_1597 2ae66a4f71aff847bf5cf9d6c2fb367f 303 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 22 300 4.2E-112 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_1597 2ae66a4f71aff847bf5cf9d6c2fb367f 303 SUPERFAMILY SSF56176 14 193 1.35E-43 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BAMF_1792 3e1bd3cce55bc975226de3241770fa6d 144 Pfam PF14040 Deoxyribonuclease NucA/NucB 50 137 5.0E-11 T 12-10-2018 IPR029476 Deoxyribonuclease NucA/NucB BAMF_0623 725c9aae69177d5cbdbeaeca767c2344 461 TIGRFAM TIGR01773 GABAperm: GABA permease 3 449 5.8E-224 T 12-10-2018 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 BAMF_0623 725c9aae69177d5cbdbeaeca767c2344 461 Pfam PF00324 Amino acid permease 15 453 1.0E-127 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BAMF_0623 725c9aae69177d5cbdbeaeca767c2344 461 Gene3D G3DSA:1.20.1740.10 6 460 4.6E-73 T 12-10-2018 BAMF_0623 725c9aae69177d5cbdbeaeca767c2344 461 PIRSF PIRSF006060 1 459 5.5E-78 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_0623 725c9aae69177d5cbdbeaeca767c2344 461 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BAMF_0264 4615e348cabcbdb03171423474734eb4 192 Gene3D G3DSA:2.60.60.30 19 187 3.1E-70 T 12-10-2018 BAMF_0264 4615e348cabcbdb03171423474734eb4 192 Pfam PF02342 TerD domain 1 188 2.8E-83 T 12-10-2018 IPR003325 TerD domain BAMF_3908 9093e1026da61f383f888a7e85a424b0 667 Gene3D G3DSA:2.40.40.20 530 667 1.7E-23 T 12-10-2018 BAMF_3908 9093e1026da61f383f888a7e85a424b0 667 Gene3D G3DSA:3.40.228.10 133 526 2.7E-132 T 12-10-2018 BAMF_3908 9093e1026da61f383f888a7e85a424b0 667 Gene3D G3DSA:3.40.50.740 69 465 2.7E-132 T 12-10-2018 BAMF_3908 9093e1026da61f383f888a7e85a424b0 667 SMART SM00926 2 56 1.7E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_3908 9093e1026da61f383f888a7e85a424b0 667 Pfam PF01568 Molydopterin dinucleotide binding domain 563 650 1.3E-12 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BAMF_3908 9093e1026da61f383f888a7e85a424b0 667 SUPERFAMILY SSF50692 512 666 2.19E-24 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BAMF_3908 9093e1026da61f383f888a7e85a424b0 667 Gene3D G3DSA:3.30.2070.10 419 504 2.7E-132 T 12-10-2018 BAMF_3908 9093e1026da61f383f888a7e85a424b0 667 Gene3D G3DSA:2.20.25.90 1 62 9.2E-14 T 12-10-2018 BAMF_3908 9093e1026da61f383f888a7e85a424b0 667 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 3 53 7.6E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_3908 9093e1026da61f383f888a7e85a424b0 667 Pfam PF00384 Molybdopterin oxidoreductase 60 461 1.3E-55 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_3908 9093e1026da61f383f888a7e85a424b0 667 SUPERFAMILY SSF53706 3 557 6.02E-148 T 12-10-2018 BAMF_1118 21f25a397a991c058ca59df2d1bccfc4 416 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 46 203 9.3E-16 T 12-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 BAMF_1118 21f25a397a991c058ca59df2d1bccfc4 416 Gene3D G3DSA:3.30.2010.10 203 285 3.4E-27 T 12-10-2018 BAMF_1118 21f25a397a991c058ca59df2d1bccfc4 416 Pfam PF01435 Peptidase family M48 207 415 1.5E-39 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BAMF_1467 84702c5692d3eb35ff694687624db347 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.3E-26 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BAMF_1467 84702c5692d3eb35ff694687624db347 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.3E-26 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BAMF_1467 84702c5692d3eb35ff694687624db347 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.3E-26 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BAMF_1467 84702c5692d3eb35ff694687624db347 88 Gene3D G3DSA:3.30.1340.10 1 88 9.3E-38 T 12-10-2018 IPR035895 HPr-like superfamily BAMF_1467 84702c5692d3eb35ff694687624db347 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 6.4E-33 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BAMF_1467 84702c5692d3eb35ff694687624db347 88 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BAMF_1467 84702c5692d3eb35ff694687624db347 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BAMF_1467 84702c5692d3eb35ff694687624db347 88 SUPERFAMILY SSF55594 1 83 1.57E-28 T 12-10-2018 IPR035895 HPr-like superfamily BAMF_1467 84702c5692d3eb35ff694687624db347 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.8E-30 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BAMF_2834 40041e1d9351ae161e4ee47169881b6d 259 SUPERFAMILY SSF53474 5 258 3.41E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2834 40041e1d9351ae161e4ee47169881b6d 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 3.3E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_2834 40041e1d9351ae161e4ee47169881b6d 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 198 212 3.3E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_2834 40041e1d9351ae161e4ee47169881b6d 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 37 52 3.3E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_2834 40041e1d9351ae161e4ee47169881b6d 259 Gene3D G3DSA:3.40.50.1820 1 258 2.8E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2834 40041e1d9351ae161e4ee47169881b6d 259 Pfam PF12146 Serine aminopeptidase, S33 8 243 1.0E-59 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 BAMF_1167 b6696680c17f6fbe42d4bfdd30d4ccb2 287 SMART SM00342 196 279 1.6E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BAMF_1167 b6696680c17f6fbe42d4bfdd30d4ccb2 287 SUPERFAMILY SSF46689 183 230 2.91E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_1167 b6696680c17f6fbe42d4bfdd30d4ccb2 287 Pfam PF02311 AraC-like ligand binding domain 28 93 3.9E-8 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BAMF_1167 b6696680c17f6fbe42d4bfdd30d4ccb2 287 SUPERFAMILY SSF51215 2 170 5.1E-21 T 12-10-2018 IPR037923 Transcription regulator HTH-like BAMF_1167 b6696680c17f6fbe42d4bfdd30d4ccb2 287 Pfam PF12833 Helix-turn-helix domain 202 280 1.7E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BAMF_1167 b6696680c17f6fbe42d4bfdd30d4ccb2 287 Gene3D G3DSA:1.10.10.60 178 230 2.8E-10 T 12-10-2018 BAMF_1167 b6696680c17f6fbe42d4bfdd30d4ccb2 287 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 233 275 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BAMF_1167 b6696680c17f6fbe42d4bfdd30d4ccb2 287 SUPERFAMILY SSF46689 232 280 2.28E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_1167 b6696680c17f6fbe42d4bfdd30d4ccb2 287 Gene3D G3DSA:1.10.10.60 231 285 1.0E-16 T 12-10-2018 BAMF_3439 ad6c0d0da3909337c4235dc2881c5896 497 Gene3D G3DSA:3.40.50.300 239 495 1.3E-43 T 12-10-2018 BAMF_3439 ad6c0d0da3909337c4235dc2881c5896 497 Gene3D G3DSA:3.40.50.300 2 237 6.8E-60 T 12-10-2018 BAMF_3439 ad6c0d0da3909337c4235dc2881c5896 497 SMART SM00382 27 216 6.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3439 ad6c0d0da3909337c4235dc2881c5896 497 SMART SM00382 276 470 2.4E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3439 ad6c0d0da3909337c4235dc2881c5896 497 SUPERFAMILY SSF52540 239 472 1.43E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3439 ad6c0d0da3909337c4235dc2881c5896 497 SUPERFAMILY SSF52540 3 222 7.88E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3439 ad6c0d0da3909337c4235dc2881c5896 497 ProSitePatterns PS00211 ABC transporters family signature. 394 408 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3439 ad6c0d0da3909337c4235dc2881c5896 497 Pfam PF00005 ABC transporter 268 421 3.3E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3439 ad6c0d0da3909337c4235dc2881c5896 497 Pfam PF00005 ABC transporter 18 168 7.2E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3439 ad6c0d0da3909337c4235dc2881c5896 497 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_1985 a43d5fab796d402c2ae18a81802d8b19 178 Pfam PF04238 Protein of unknown function (DUF420) 46 174 4.0E-46 T 12-10-2018 IPR007352 Protein of unknown function DUF420 BAMF_2386 45ae7238779da4a45e2b63d204a2f274 320 Gene3D G3DSA:3.30.420.40 8 307 1.1E-101 T 12-10-2018 BAMF_2386 45ae7238779da4a45e2b63d204a2f274 320 ProSitePatterns PS01125 ROK family signature. 137 164 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BAMF_2386 45ae7238779da4a45e2b63d204a2f274 320 SUPERFAMILY SSF53067 6 313 9.9E-70 T 12-10-2018 BAMF_2386 45ae7238779da4a45e2b63d204a2f274 320 Pfam PF00480 ROK family 7 312 1.5E-76 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BAMF_2386 45ae7238779da4a45e2b63d204a2f274 320 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 7 320 1.2E-143 T 12-10-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 BAMF_2386 45ae7238779da4a45e2b63d204a2f274 320 Gene3D G3DSA:3.30.420.40 128 296 1.1E-101 T 12-10-2018 BAMF_2541 5d90fa37b417ff6174546430f7ba8705 211 TIGRFAM TIGR00235 udk: uridine kinase 4 206 8.6E-97 T 12-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 BAMF_2541 5d90fa37b417ff6174546430f7ba8705 211 Gene3D G3DSA:3.40.50.300 2 211 1.5E-66 T 12-10-2018 BAMF_2541 5d90fa37b417ff6174546430f7ba8705 211 PRINTS PR00988 Uridine kinase signature 35 46 5.3E-38 T 12-10-2018 BAMF_2541 5d90fa37b417ff6174546430f7ba8705 211 PRINTS PR00988 Uridine kinase signature 150 161 5.3E-38 T 12-10-2018 BAMF_2541 5d90fa37b417ff6174546430f7ba8705 211 PRINTS PR00988 Uridine kinase signature 5 22 5.3E-38 T 12-10-2018 BAMF_2541 5d90fa37b417ff6174546430f7ba8705 211 PRINTS PR00988 Uridine kinase signature 172 185 5.3E-38 T 12-10-2018 BAMF_2541 5d90fa37b417ff6174546430f7ba8705 211 PRINTS PR00988 Uridine kinase signature 136 146 5.3E-38 T 12-10-2018 BAMF_2541 5d90fa37b417ff6174546430f7ba8705 211 PRINTS PR00988 Uridine kinase signature 80 95 5.3E-38 T 12-10-2018 BAMF_2541 5d90fa37b417ff6174546430f7ba8705 211 SUPERFAMILY SSF52540 3 197 7.43E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2541 5d90fa37b417ff6174546430f7ba8705 211 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 192 3.6E-44 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 BAMF_2541 5d90fa37b417ff6174546430f7ba8705 211 Hamap MF_00551 Uridine kinase [udk]. 2 206 42.37 T 12-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 BAMF_3291 824536a21e15a5401c38e346fe91ca65 482 Gene3D G3DSA:3.40.50.1820 2 482 9.9E-172 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_3291 824536a21e15a5401c38e346fe91ca65 482 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 177 192 - T 12-10-2018 IPR019826 Carboxylesterase type B, active site BAMF_3291 824536a21e15a5401c38e346fe91ca65 482 PRINTS PR00878 Cholinesterase signature 105 134 5.3E-5 T 12-10-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 BAMF_3291 824536a21e15a5401c38e346fe91ca65 482 PRINTS PR00878 Cholinesterase signature 395 407 5.3E-5 T 12-10-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 BAMF_3291 824536a21e15a5401c38e346fe91ca65 482 SUPERFAMILY SSF53474 4 462 6.8E-135 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_3291 824536a21e15a5401c38e346fe91ca65 482 Pfam PF00135 Carboxylesterase family 4 466 4.9E-125 T 12-10-2018 IPR002018 Carboxylesterase, type B BAMF_3291 824536a21e15a5401c38e346fe91ca65 482 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 81 91 - T 12-10-2018 IPR019819 Carboxylesterase type B, conserved site BAMF_1112 2b6c6180f576f918fd491a08c34e1786 429 Gene3D G3DSA:1.10.3860.10 1 418 1.2E-135 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BAMF_1112 2b6c6180f576f918fd491a08c34e1786 429 PRINTS PR00173 Glutamate-aspartate symporter signature 330 349 3.8E-46 T 12-10-2018 BAMF_1112 2b6c6180f576f918fd491a08c34e1786 429 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 3.8E-46 T 12-10-2018 BAMF_1112 2b6c6180f576f918fd491a08c34e1786 429 PRINTS PR00173 Glutamate-aspartate symporter signature 357 377 3.8E-46 T 12-10-2018 BAMF_1112 2b6c6180f576f918fd491a08c34e1786 429 PRINTS PR00173 Glutamate-aspartate symporter signature 2 22 3.8E-46 T 12-10-2018 BAMF_1112 2b6c6180f576f918fd491a08c34e1786 429 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 3.8E-46 T 12-10-2018 BAMF_1112 2b6c6180f576f918fd491a08c34e1786 429 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 3.8E-46 T 12-10-2018 BAMF_1112 2b6c6180f576f918fd491a08c34e1786 429 PRINTS PR00173 Glutamate-aspartate symporter signature 225 244 3.8E-46 T 12-10-2018 BAMF_1112 2b6c6180f576f918fd491a08c34e1786 429 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 3.8E-46 T 12-10-2018 BAMF_1112 2b6c6180f576f918fd491a08c34e1786 429 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 3.8E-46 T 12-10-2018 BAMF_1112 2b6c6180f576f918fd491a08c34e1786 429 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 298 321 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BAMF_1112 2b6c6180f576f918fd491a08c34e1786 429 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 38 53 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BAMF_1112 2b6c6180f576f918fd491a08c34e1786 429 Pfam PF00375 Sodium:dicarboxylate symporter family 8 403 3.9E-125 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BAMF_1112 2b6c6180f576f918fd491a08c34e1786 429 SUPERFAMILY SSF118215 8 404 6.28E-123 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BAMF_1818 2357534e2edea3bf0739281849818f7a 321 SMART SM00318 80 213 6.7E-38 T 12-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 BAMF_1818 2357534e2edea3bf0739281849818f7a 321 SUPERFAMILY SSF50199 78 216 2.75E-34 T 12-10-2018 BAMF_1818 2357534e2edea3bf0739281849818f7a 321 Pfam PF05901 Excalibur calcium-binding domain 284 319 3.1E-13 T 12-10-2018 IPR008613 Excalibur calcium-binding domain BAMF_1818 2357534e2edea3bf0739281849818f7a 321 Pfam PF00565 Staphylococcal nuclease homologue 105 213 1.5E-30 T 12-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 BAMF_1818 2357534e2edea3bf0739281849818f7a 321 Gene3D G3DSA:2.40.50.90 72 219 3.8E-48 T 12-10-2018 IPR035437 SNase-like, OB-fold superfamily BAMF_1818 2357534e2edea3bf0739281849818f7a 321 ProSitePatterns PS01284 Thermonuclease family signature 2. 154 164 - T 12-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 BAMF_1818 2357534e2edea3bf0739281849818f7a 321 SMART SM00894 283 319 3.7E-13 T 12-10-2018 IPR008613 Excalibur calcium-binding domain BAMF_3006 046d0b157297f9100b6cd48b8a8e7249 406 SUPERFAMILY SSF51905 4 336 5.37E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_3006 046d0b157297f9100b6cd48b8a8e7249 406 Gene3D G3DSA:3.50.50.100 3 406 3.8E-144 T 12-10-2018 BAMF_3006 046d0b157297f9100b6cd48b8a8e7249 406 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 327 9.1E-45 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BAMF_3006 046d0b157297f9100b6cd48b8a8e7249 406 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.6E-5 T 12-10-2018 BAMF_3006 046d0b157297f9100b6cd48b8a8e7249 406 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.6E-5 T 12-10-2018 BAMF_3006 046d0b157297f9100b6cd48b8a8e7249 406 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 1.6E-5 T 12-10-2018 BAMF_0359 f1a1d3109f31ee79cd0a320a2b8ff473 462 Gene3D G3DSA:3.40.605.10 4 452 2.7E-182 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BAMF_0359 f1a1d3109f31ee79cd0a320a2b8ff473 462 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 7 456 8.8E-227 T 12-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 BAMF_0359 f1a1d3109f31ee79cd0a320a2b8ff473 462 PIRSF PIRSF036492 14 459 7.4E-86 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 BAMF_0359 f1a1d3109f31ee79cd0a320a2b8ff473 462 Gene3D G3DSA:3.40.309.10 238 430 2.7E-182 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BAMF_0359 f1a1d3109f31ee79cd0a320a2b8ff473 462 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 259 270 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BAMF_0359 f1a1d3109f31ee79cd0a320a2b8ff473 462 SUPERFAMILY SSF53720 4 460 6.54E-171 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BAMF_0359 f1a1d3109f31ee79cd0a320a2b8ff473 462 Pfam PF00171 Aldehyde dehydrogenase family 4 457 5.9E-175 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BAMF_3904 52454941f69160d58d53af63fe5e8e90 81 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 27 78 7.0E-23 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3904 52454941f69160d58d53af63fe5e8e90 81 TIGRFAM TIGR00165 S18: ribosomal protein bS18 12 79 1.8E-37 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3904 52454941f69160d58d53af63fe5e8e90 81 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 9 80 22.443 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3904 52454941f69160d58d53af63fe5e8e90 81 ProSitePatterns PS00057 Ribosomal protein S18 signature. 28 51 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3904 52454941f69160d58d53af63fe5e8e90 81 Gene3D G3DSA:4.10.640.10 3 80 6.0E-31 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3904 52454941f69160d58d53af63fe5e8e90 81 PRINTS PR00974 Ribosomal protein S18 family signature 35 45 2.9E-21 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3904 52454941f69160d58d53af63fe5e8e90 81 PRINTS PR00974 Ribosomal protein S18 family signature 67 77 2.9E-21 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3904 52454941f69160d58d53af63fe5e8e90 81 PRINTS PR00974 Ribosomal protein S18 family signature 53 67 2.9E-21 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3904 52454941f69160d58d53af63fe5e8e90 81 PRINTS PR00974 Ribosomal protein S18 family signature 45 52 2.9E-21 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3904 52454941f69160d58d53af63fe5e8e90 81 SUPERFAMILY SSF46911 8 80 4.45E-31 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3904 52454941f69160d58d53af63fe5e8e90 81 Pfam PF01084 Ribosomal protein S18 25 75 3.4E-28 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3123 cf4b60f9563d4e2af512bf791c305422 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 BAMF_3123 cf4b60f9563d4e2af512bf791c305422 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 BAMF_3123 cf4b60f9563d4e2af512bf791c305422 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 1.2E-140 T 12-10-2018 IPR002155 Thiolase GO:0016747 BAMF_3123 cf4b60f9563d4e2af512bf791c305422 391 SUPERFAMILY SSF53901 1 264 5.91E-77 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_3123 cf4b60f9563d4e2af512bf791c305422 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 BAMF_3123 cf4b60f9563d4e2af512bf791c305422 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 1.2E-48 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BAMF_3123 cf4b60f9563d4e2af512bf791c305422 391 Gene3D G3DSA:3.40.47.10 128 387 6.1E-151 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_3123 cf4b60f9563d4e2af512bf791c305422 391 Gene3D G3DSA:3.40.47.10 5 274 6.1E-151 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_3123 cf4b60f9563d4e2af512bf791c305422 391 Pfam PF00108 Thiolase, N-terminal domain 5 260 1.5E-78 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BAMF_3123 cf4b60f9563d4e2af512bf791c305422 391 SUPERFAMILY SSF53901 270 390 8.16E-43 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_3123 cf4b60f9563d4e2af512bf791c305422 391 PIRSF PIRSF000429 1 391 1.3E-132 T 12-10-2018 IPR002155 Thiolase GO:0016747 BAMF_3762 7ac676505e32e9a8c7378a9bf3f3bf8b 472 PIRSF PIRSF006060 1 468 8.0E-78 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_3762 7ac676505e32e9a8c7378a9bf3f3bf8b 472 ProSitePatterns PS00218 Amino acid permeases signature. 43 74 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BAMF_3762 7ac676505e32e9a8c7378a9bf3f3bf8b 472 Pfam PF00324 Amino acid permease 18 460 3.4E-130 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BAMF_3762 7ac676505e32e9a8c7378a9bf3f3bf8b 472 Gene3D G3DSA:1.20.1740.10 9 469 4.3E-62 T 12-10-2018 BAMF_3658 53b6669d438d498c92948a44064c77b6 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 6.9E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_3658 53b6669d438d498c92948a44064c77b6 207 SUPERFAMILY SSF46689 5 67 8.74E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_3658 53b6669d438d498c92948a44064c77b6 207 Gene3D G3DSA:1.10.357.10 2 204 1.4E-22 T 12-10-2018 BAMF_3658 53b6669d438d498c92948a44064c77b6 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_3658 53b6669d438d498c92948a44064c77b6 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_0176 ac469f3e537fa0232dd2d0fea4d06378 187 Pfam PF04542 Sigma-70 region 2 24 89 4.3E-22 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_0176 ac469f3e537fa0232dd2d0fea4d06378 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 184 1.3E-35 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_0176 ac469f3e537fa0232dd2d0fea4d06378 187 Gene3D G3DSA:1.10.1740.10 5 109 1.5E-32 T 12-10-2018 BAMF_0176 ac469f3e537fa0232dd2d0fea4d06378 187 TIGRFAM TIGR02948 SigW_bacill: RNA polymerase sigma-W factor 1 187 5.0E-109 T 12-10-2018 IPR014294 RNA polymerase sigma-W, bacillaceae BAMF_0176 ac469f3e537fa0232dd2d0fea4d06378 187 SUPERFAMILY SSF88659 117 185 3.18E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_0176 ac469f3e537fa0232dd2d0fea4d06378 187 SUPERFAMILY SSF88946 8 98 9.1E-31 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_0176 ac469f3e537fa0232dd2d0fea4d06378 187 Pfam PF08281 Sigma-70, region 4 130 180 6.0E-15 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_0176 ac469f3e537fa0232dd2d0fea4d06378 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 45 76 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_0176 ac469f3e537fa0232dd2d0fea4d06378 187 Gene3D G3DSA:1.10.10.10 121 187 8.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1575 7b6e8182affa4ad1b6dc675cf589b8ff 184 SUPERFAMILY SSF53335 1 181 5.67E-49 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_1575 7b6e8182affa4ad1b6dc675cf589b8ff 184 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BAMF_1575 7b6e8182affa4ad1b6dc675cf589b8ff 184 PIRSF PIRSF004553 1 183 2.2E-50 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 BAMF_1575 7b6e8182affa4ad1b6dc675cf589b8ff 184 Gene3D G3DSA:3.40.50.150 1 183 3.9E-58 T 12-10-2018 BAMF_1575 7b6e8182affa4ad1b6dc675cf589b8ff 184 Pfam PF03602 Conserved hypothetical protein 95 1 181 2.2E-58 T 12-10-2018 BAMF_1575 7b6e8182affa4ad1b6dc675cf589b8ff 184 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 181 1.8E-61 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 BAMF_1533 bf32b5fd912b6a388169eee2c041325e 371 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 24 364 1.5E-141 T 12-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BAMF_1533 bf32b5fd912b6a388169eee2c041325e 371 Pfam PF00676 Dehydrogenase E1 component 53 343 3.3E-102 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BAMF_1533 bf32b5fd912b6a388169eee2c041325e 371 SUPERFAMILY SSF52518 10 365 6.59E-99 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_1533 bf32b5fd912b6a388169eee2c041325e 371 Gene3D G3DSA:3.40.50.970 5 371 6.3E-121 T 12-10-2018 BAMF_3460 eb6fdb3e96429c97c2e39a32a80fe105 146 SMART SM00860 16 132 1.3E-7 T 12-10-2018 IPR018958 Knr4/Smi1-like domain BAMF_3460 eb6fdb3e96429c97c2e39a32a80fe105 146 Gene3D G3DSA:3.40.1580.10 3 142 2.8E-12 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily BAMF_3460 eb6fdb3e96429c97c2e39a32a80fe105 146 SUPERFAMILY SSF160631 6 144 8.63E-15 T 12-10-2018 BAMF_3460 eb6fdb3e96429c97c2e39a32a80fe105 146 Pfam PF14568 SMI1-KNR4 cell-wall 19 130 7.8E-11 T 12-10-2018 BAMF_1168 819205f929f67d505edb071a7b2d9325 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 5.4E-22 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_1168 819205f929f67d505edb071a7b2d9325 341 Pfam PF13377 Periplasmic binding protein-like domain 172 332 7.3E-47 T 12-10-2018 BAMF_1168 819205f929f67d505edb071a7b2d9325 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 2.1E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_1168 819205f929f67d505edb071a7b2d9325 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 2.1E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_1168 819205f929f67d505edb071a7b2d9325 341 Gene3D G3DSA:1.10.260.40 1 59 1.5E-23 T 12-10-2018 BAMF_1168 819205f929f67d505edb071a7b2d9325 341 SMART SM00354 2 72 3.1E-37 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_1168 819205f929f67d505edb071a7b2d9325 341 SUPERFAMILY SSF47413 2 61 4.74E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_1168 819205f929f67d505edb071a7b2d9325 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 BAMF_1168 819205f929f67d505edb071a7b2d9325 341 SUPERFAMILY SSF53822 62 337 8.08E-87 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BAMF_1168 819205f929f67d505edb071a7b2d9325 341 Gene3D G3DSA:3.40.50.2300 63 324 4.4E-88 T 12-10-2018 BAMF_1168 819205f929f67d505edb071a7b2d9325 341 Gene3D G3DSA:3.40.50.2300 164 329 4.4E-88 T 12-10-2018 BAMF_2863 5a4f363b32a165362a5a1dd357c78a26 470 Hamap MF_01935 Isochorismate synthase MenF [menF]. 1 467 30.237 T 12-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 BAMF_2863 5a4f363b32a165362a5a1dd357c78a26 470 SUPERFAMILY SSF56322 49 466 1.96E-100 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BAMF_2863 5a4f363b32a165362a5a1dd357c78a26 470 Gene3D G3DSA:3.60.120.10 3 469 2.8E-113 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BAMF_2863 5a4f363b32a165362a5a1dd357c78a26 470 Pfam PF00425 chorismate binding enzyme 205 457 1.7E-74 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BAMF_2863 5a4f363b32a165362a5a1dd357c78a26 470 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 116 465 5.5E-109 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 BAMF_3437 67110b30e43326e20a16ae770d986289 293 Hamap MF_01987 Ribokinase [rbsK]. 2 291 24.366 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 BAMF_3437 67110b30e43326e20a16ae770d986289 293 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 236 249 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BAMF_3437 67110b30e43326e20a16ae770d986289 293 Pfam PF00294 pfkB family carbohydrate kinase 1 284 5.5E-75 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB BAMF_3437 67110b30e43326e20a16ae770d986289 293 Gene3D G3DSA:3.40.1190.20 1 293 3.8E-92 T 12-10-2018 IPR029056 Ribokinase-like BAMF_3437 67110b30e43326e20a16ae770d986289 293 PRINTS PR00990 Ribokinase signature 207 218 2.6E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BAMF_3437 67110b30e43326e20a16ae770d986289 293 PRINTS PR00990 Ribokinase signature 6 27 2.6E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BAMF_3437 67110b30e43326e20a16ae770d986289 293 PRINTS PR00990 Ribokinase signature 104 117 2.6E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BAMF_3437 67110b30e43326e20a16ae770d986289 293 PRINTS PR00990 Ribokinase signature 172 187 2.6E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BAMF_3437 67110b30e43326e20a16ae770d986289 293 PRINTS PR00990 Ribokinase signature 33 52 2.6E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BAMF_3437 67110b30e43326e20a16ae770d986289 293 SUPERFAMILY SSF53613 1 292 5.92E-79 T 12-10-2018 IPR029056 Ribokinase-like BAMF_3437 67110b30e43326e20a16ae770d986289 293 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 290 7.2E-104 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 BAMF_1510 db5d678bfe1d4fa435ec6bca3d50fd74 230 Gene3D G3DSA:3.40.50.300 1 228 8.7E-68 T 12-10-2018 BAMF_1510 db5d678bfe1d4fa435ec6bca3d50fd74 230 SUPERFAMILY SSF52540 1 224 1.3E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1510 db5d678bfe1d4fa435ec6bca3d50fd74 230 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_1510 db5d678bfe1d4fa435ec6bca3d50fd74 230 SMART SM00382 30 217 1.7E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1510 db5d678bfe1d4fa435ec6bca3d50fd74 230 Pfam PF00005 ABC transporter 21 169 1.5E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1131 ed544963d7a21f40f13f2c3ec32c6a18 123 Gene3D G3DSA:1.10.10.810 1 115 1.0E-47 T 12-10-2018 BAMF_1131 ed544963d7a21f40f13f2c3ec32c6a18 123 SUPERFAMILY SSF159888 1 123 2.35E-37 T 12-10-2018 BAMF_1131 ed544963d7a21f40f13f2c3ec32c6a18 123 Pfam PF08818 Domain of unknown function (DU1801) 19 110 3.2E-10 T 12-10-2018 IPR014922 Domain of unknown function DUF1801 BAMF_3339 4f44a4417b8e1eb45092ac1151b8ae65 390 Gene3D G3DSA:3.30.930.10 1 321 3.1E-101 T 12-10-2018 BAMF_3339 4f44a4417b8e1eb45092ac1151b8ae65 390 Gene3D G3DSA:3.40.50.12590 322 389 6.1E-16 T 12-10-2018 BAMF_3339 4f44a4417b8e1eb45092ac1151b8ae65 390 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 370 34.458 T 12-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 BAMF_3339 4f44a4417b8e1eb45092ac1151b8ae65 390 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 11 320 2.8E-95 T 12-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 BAMF_3339 4f44a4417b8e1eb45092ac1151b8ae65 390 Pfam PF13393 Histidyl-tRNA synthetase 9 316 2.1E-75 T 12-10-2018 BAMF_3339 4f44a4417b8e1eb45092ac1151b8ae65 390 PIRSF PIRSF001549 1 385 4.8E-80 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 BAMF_3339 4f44a4417b8e1eb45092ac1151b8ae65 390 SUPERFAMILY SSF55681 4 320 9.76E-63 T 12-10-2018 BAMF_2841 ff8dc37f6e16a1f767f55a05efaf70f4 257 SUPERFAMILY SSF53474 8 256 3.11E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2841 ff8dc37f6e16a1f767f55a05efaf70f4 257 Gene3D G3DSA:3.40.50.1820 19 257 1.0E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2841 ff8dc37f6e16a1f767f55a05efaf70f4 257 Pfam PF00326 Prolyl oligopeptidase family 64 255 9.8E-24 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BAMF_2841 ff8dc37f6e16a1f767f55a05efaf70f4 257 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 97 127 - T 12-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 BAMF_0181 f907ff18586a0434d2be2955629d5c38 600 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 600 1.2E-230 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BAMF_0181 f907ff18586a0434d2be2955629d5c38 600 Gene3D G3DSA:3.40.50.10490 243 442 2.4E-61 T 12-10-2018 BAMF_0181 f907ff18586a0434d2be2955629d5c38 600 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 600 38.8 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BAMF_0181 f907ff18586a0434d2be2955629d5c38 600 Gene3D G3DSA:3.60.20.10 2 239 3.0E-69 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BAMF_0181 f907ff18586a0434d2be2955629d5c38 600 Pfam PF13522 Glutamine amidotransferase domain 59 191 2.2E-19 T 12-10-2018 BAMF_0181 f907ff18586a0434d2be2955629d5c38 600 SUPERFAMILY SSF56235 2 234 1.24E-64 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BAMF_0181 f907ff18586a0434d2be2955629d5c38 600 SUPERFAMILY SSF53697 244 600 7.05E-97 T 12-10-2018 BAMF_0181 f907ff18586a0434d2be2955629d5c38 600 Pfam PF01380 SIS domain 457 582 7.4E-22 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BAMF_0181 f907ff18586a0434d2be2955629d5c38 600 Pfam PF01380 SIS domain 288 413 1.6E-35 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BAMF_0181 f907ff18586a0434d2be2955629d5c38 600 Gene3D G3DSA:3.40.50.10490 444 600 4.2E-62 T 12-10-2018 BAMF_2017 114ecbe386727f24239ef7fa8373c7c7 278 SUPERFAMILY SSF52091 164 272 4.12E-17 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_2017 114ecbe386727f24239ef7fa8373c7c7 278 Gene3D G3DSA:3.30.750.24 163 277 1.6E-32 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_2017 114ecbe386727f24239ef7fa8373c7c7 278 Pfam PF01740 STAS domain 173 271 5.5E-14 T 12-10-2018 IPR002645 STAS domain BAMF_1219 0306658511cff1d7f07ddd4f554d4c55 358 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 298 4.6E-13 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BAMF_1219 0306658511cff1d7f07ddd4f554d4c55 358 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 3.3E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BAMF_1219 0306658511cff1d7f07ddd4f554d4c55 358 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_1219 0306658511cff1d7f07ddd4f554d4c55 358 Gene3D G3DSA:3.40.50.300 1 329 1.7E-99 T 12-10-2018 BAMF_1219 0306658511cff1d7f07ddd4f554d4c55 358 Pfam PF00005 ABC transporter 25 183 2.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1219 0306658511cff1d7f07ddd4f554d4c55 358 SUPERFAMILY SSF52540 4 254 4.28E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1219 0306658511cff1d7f07ddd4f554d4c55 358 SMART SM00382 33 233 2.3E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2591 ff2192a9fd54a5062510d15813c52e69 367 SUPERFAMILY SSF142754 35 365 1.83E-95 T 12-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BAMF_2591 ff2192a9fd54a5062510d15813c52e69 367 Gene3D G3DSA:3.40.50.10800 29 347 6.4E-82 T 12-10-2018 BAMF_2591 ff2192a9fd54a5062510d15813c52e69 367 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 21 365 1.7E-124 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BAMF_2591 ff2192a9fd54a5062510d15813c52e69 367 Gene3D G3DSA:3.40.50.10800 112 364 6.4E-82 T 12-10-2018 BAMF_2591 ff2192a9fd54a5062510d15813c52e69 367 Gene3D G3DSA:3.40.50.10800 229 317 6.4E-82 T 12-10-2018 BAMF_2591 ff2192a9fd54a5062510d15813c52e69 367 Pfam PF02445 Quinolinate synthetase A protein 29 364 6.4E-106 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BAMF_2591 ff2192a9fd54a5062510d15813c52e69 367 Hamap MF_00569 Quinolinate synthase A [nadA]. 22 366 55.731 T 12-10-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BAMF_3565 106f6b288b184398fe5aa6fd75f66456 238 Pfam PF14256 YwiC-like protein 5 129 9.8E-40 T 12-10-2018 IPR025576 YwiC-like protein BAMF_3455 c4e42732e1ac429081b1af4dfec86f1c 158 Gene3D G3DSA:3.30.70.920 66 158 2.7E-15 T 12-10-2018 BAMF_3455 c4e42732e1ac429081b1af4dfec86f1c 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BAMF_3455 c4e42732e1ac429081b1af4dfec86f1c 158 Pfam PF13404 AsnC-type helix-turn-helix domain 12 52 1.5E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BAMF_3455 c4e42732e1ac429081b1af4dfec86f1c 158 Gene3D G3DSA:1.10.10.10 3 65 8.9E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3455 c4e42732e1ac429081b1af4dfec86f1c 158 Pfam PF01037 Lrp/AsnC ligand binding domain 79 148 1.2E-10 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BAMF_3455 c4e42732e1ac429081b1af4dfec86f1c 158 SUPERFAMILY SSF46785 11 71 2.38E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3455 c4e42732e1ac429081b1af4dfec86f1c 158 SMART SM00344 12 118 6.8E-42 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BAMF_3455 c4e42732e1ac429081b1af4dfec86f1c 158 SUPERFAMILY SSF54909 74 156 4.02E-12 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BAMF_3455 c4e42732e1ac429081b1af4dfec86f1c 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 4.5E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BAMF_3455 c4e42732e1ac429081b1af4dfec86f1c 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 4.5E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BAMF_3455 c4e42732e1ac429081b1af4dfec86f1c 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 4.5E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BAMF_1784 7c936149cf447fbd063543435214c3c0 257 SUPERFAMILY SSF52096 2 252 2.07E-46 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_1784 7c936149cf447fbd063543435214c3c0 257 Gene3D G3DSA:3.90.226.10 1 257 1.1E-76 T 12-10-2018 BAMF_1784 7c936149cf447fbd063543435214c3c0 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 253 1.7E-64 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BAMF_2455 520c85e4077833bd6a9153d3971de2c9 745 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 191 361 7.7E-41 T 12-10-2018 IPR004477 ComEC/Rec2-related protein BAMF_2455 520c85e4077833bd6a9153d3971de2c9 745 SUPERFAMILY SSF56281 466 717 9.8E-48 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_2455 520c85e4077833bd6a9153d3971de2c9 745 Pfam PF13567 Domain of unknown function (DUF4131) 10 133 1.8E-16 T 12-10-2018 IPR025405 Domain of unknown function DUF4131 BAMF_2455 520c85e4077833bd6a9153d3971de2c9 745 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 31 711 1.3E-191 T 12-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 BAMF_2455 520c85e4077833bd6a9153d3971de2c9 745 SMART SM00849 471 682 9.4E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_2455 520c85e4077833bd6a9153d3971de2c9 745 Pfam PF00753 Metallo-beta-lactamase superfamily 470 681 3.8E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_2455 520c85e4077833bd6a9153d3971de2c9 745 Pfam PF03772 Competence protein 170 430 6.0E-62 T 12-10-2018 IPR004477 ComEC/Rec2-related protein BAMF_2455 520c85e4077833bd6a9153d3971de2c9 745 Gene3D G3DSA:3.60.15.10 463 724 7.2E-69 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 Pfam PF00570 HRDC domain 519 584 1.5E-22 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 Gene3D G3DSA:3.40.50.300 203 334 9.3E-39 T 12-10-2018 BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 Gene3D G3DSA:3.40.50.300 1 202 2.2E-74 T 12-10-2018 BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 SMART SM00487 14 210 1.2E-29 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 Pfam PF16124 RecQ zinc-binding 337 398 6.3E-18 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 SUPERFAMILY SSF47819 515 590 4.11E-25 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 Gene3D G3DSA:1.10.150.80 512 592 1.6E-25 T 12-10-2018 BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 SMART SM00490 244 325 1.4E-26 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 Pfam PF09382 RQC domain 403 508 2.3E-31 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 SMART SM00341 514 592 5.0E-21 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 458 9.3E-147 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 SUPERFAMILY SSF46785 397 539 4.76E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 Pfam PF00270 DEAD/DEAH box helicase 21 182 3.3E-17 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 SUPERFAMILY SSF52540 59 346 1.54E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 587 1.5E-232 T 12-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 Pfam PF00271 Helicase conserved C-terminal domain 217 324 1.6E-17 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 Gene3D G3DSA:1.10.10.10 335 511 1.4E-48 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1991 a94129fa8314eeaada824f6ab167af2a 592 SMART SM00956 406 509 2.7E-40 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BAMF_0641 bb6ec3dda6679a4dc6bd3a91dd9562c4 227 SUPERFAMILY SSF52317 2 219 2.5E-75 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_0641 bb6ec3dda6679a4dc6bd3a91dd9562c4 227 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 217 43.549 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BAMF_0641 bb6ec3dda6679a4dc6bd3a91dd9562c4 227 PIRSF PIRSF001586 1 222 1.6E-85 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BAMF_0641 bb6ec3dda6679a4dc6bd3a91dd9562c4 227 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 218 1.8E-91 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BAMF_0641 bb6ec3dda6679a4dc6bd3a91dd9562c4 227 Gene3D G3DSA:3.40.50.880 1 220 2.9E-70 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_0641 bb6ec3dda6679a4dc6bd3a91dd9562c4 227 SMART SM01211 1 219 1.0E-132 T 12-10-2018 BAMF_0641 bb6ec3dda6679a4dc6bd3a91dd9562c4 227 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 203 3.7E-42 T 12-10-2018 BAMF_1265 e5272fdeca42e50f1dcf3856e5778232 240 SUPERFAMILY SSF53474 8 237 6.77E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1265 e5272fdeca42e50f1dcf3856e5778232 240 Pfam PF00756 Putative esterase 15 238 2.4E-59 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 BAMF_1265 e5272fdeca42e50f1dcf3856e5778232 240 Gene3D G3DSA:3.40.50.1820 2 240 2.8E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1114 7f2d27f6fca644bb839af36190142b19 331 SUPERFAMILY SSF82649 245 331 4.6E-28 T 12-10-2018 BAMF_1114 7f2d27f6fca644bb839af36190142b19 331 SUPERFAMILY SSF55681 2 244 2.06E-81 T 12-10-2018 BAMF_1114 7f2d27f6fca644bb839af36190142b19 331 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 246 330 1.9E-32 T 12-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 BAMF_1114 7f2d27f6fca644bb839af36190142b19 331 Gene3D G3DSA:3.30.390.50 245 331 1.4E-32 T 12-10-2018 BAMF_1114 7f2d27f6fca644bb839af36190142b19 331 Pfam PF03099 Biotin/lipoate A/B protein ligase family 48 153 7.8E-12 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BAMF_1114 7f2d27f6fca644bb839af36190142b19 331 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 2 323 4.2E-139 T 12-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 BAMF_1114 7f2d27f6fca644bb839af36190142b19 331 Gene3D G3DSA:3.30.930.10 3 244 4.9E-81 T 12-10-2018 BAMF_3786 03792ef830d7a75259de69b5f2463317 330 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 11 320 2.8E-119 T 12-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 BAMF_3786 03792ef830d7a75259de69b5f2463317 330 SUPERFAMILY SSF53613 10 321 1.54E-73 T 12-10-2018 IPR029056 Ribokinase-like BAMF_3786 03792ef830d7a75259de69b5f2463317 330 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 265 278 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BAMF_3786 03792ef830d7a75259de69b5f2463317 330 Gene3D G3DSA:3.40.1190.20 14 300 7.0E-104 T 12-10-2018 IPR029056 Ribokinase-like BAMF_3786 03792ef830d7a75259de69b5f2463317 330 Hamap MF_01668 5-dehydro-2-deoxygluconokinase [iolC]. 7 325 55.758 T 12-10-2018 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes GO:0016310|GO:0047590 KEGG: 00562+2.7.1.92 BAMF_3786 03792ef830d7a75259de69b5f2463317 330 Gene3D G3DSA:2.20.150.10 19 115 7.0E-104 T 12-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 BAMF_3786 03792ef830d7a75259de69b5f2463317 330 Pfam PF00294 pfkB family carbohydrate kinase 12 313 8.5E-67 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB BAMF_1811 40b622f5d5ecdce1fffb964ea7801416 321 Gene3D G3DSA:1.10.8.60 226 315 2.1E-19 T 12-10-2018 BAMF_1811 40b622f5d5ecdce1fffb964ea7801416 321 SUPERFAMILY SSF52540 40 315 2.12E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1811 40b622f5d5ecdce1fffb964ea7801416 321 Gene3D G3DSA:3.40.50.300 25 225 7.3E-58 T 12-10-2018 BAMF_1811 40b622f5d5ecdce1fffb964ea7801416 321 TIGRFAM TIGR02881 spore_V_K: stage V sporulation protein K 50 311 9.6E-141 T 12-10-2018 IPR014232 Sporulation stage V, protein K BAMF_1811 40b622f5d5ecdce1fffb964ea7801416 321 SMART SM00382 90 228 8.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1811 40b622f5d5ecdce1fffb964ea7801416 321 PRINTS PR00819 CbxX/CfqX superfamily signature 175 187 3.6E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BAMF_1811 40b622f5d5ecdce1fffb964ea7801416 321 PRINTS PR00819 CbxX/CfqX superfamily signature 131 145 3.6E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BAMF_1811 40b622f5d5ecdce1fffb964ea7801416 321 PRINTS PR00819 CbxX/CfqX superfamily signature 145 164 3.6E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BAMF_1811 40b622f5d5ecdce1fffb964ea7801416 321 PRINTS PR00819 CbxX/CfqX superfamily signature 273 285 3.6E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BAMF_1811 40b622f5d5ecdce1fffb964ea7801416 321 PRINTS PR00819 CbxX/CfqX superfamily signature 53 67 3.6E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BAMF_1811 40b622f5d5ecdce1fffb964ea7801416 321 PRINTS PR00819 CbxX/CfqX superfamily signature 213 232 3.6E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BAMF_1811 40b622f5d5ecdce1fffb964ea7801416 321 PRINTS PR00819 CbxX/CfqX superfamily signature 196 213 3.6E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BAMF_1811 40b622f5d5ecdce1fffb964ea7801416 321 PRINTS PR00819 CbxX/CfqX superfamily signature 93 108 3.6E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BAMF_1811 40b622f5d5ecdce1fffb964ea7801416 321 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 94 225 3.4E-19 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BAMF_3054 d24fba4bfab77aa3142d0b0c16c9c296 296 SUPERFAMILY SSF161098 54 285 6.15E-59 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3054 d24fba4bfab77aa3142d0b0c16c9c296 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 286 3.6E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_3054 d24fba4bfab77aa3142d0b0c16c9c296 296 Gene3D G3DSA:1.10.3720.10 50 294 5.2E-72 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1761 4ab0dde34440214ae5cc33afbf29c4a1 85 Pfam PF11588 Protein of unknown function (DUF3243) 2 80 8.7E-35 T 12-10-2018 IPR021637 Protein of unknown function DUF3243 BAMF_1761 4ab0dde34440214ae5cc33afbf29c4a1 85 Gene3D G3DSA:1.10.760.20 1 82 2.2E-31 T 12-10-2018 IPR038292 YmfJ/YflH superfamily BAMF_1761 4ab0dde34440214ae5cc33afbf29c4a1 85 PIRSF PIRSF004764 1 85 6.0E-28 T 12-10-2018 IPR024702 Uncharacterised conserved protein YmfJ BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 Gene3D G3DSA:3.10.350.10 84 137 1.4E-18 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 Gene3D G3DSA:3.10.350.10 25 79 2.7E-14 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 Gene3D G3DSA:3.10.350.10 149 203 3.3E-18 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 SUPERFAMILY SSF54106 88 130 2.88E-11 T 12-10-2018 BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 SMART SM00257 88 131 6.4E-16 T 12-10-2018 IPR018392 LysM domain BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 SMART SM00257 28 71 3.9E-14 T 12-10-2018 IPR018392 LysM domain BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 SMART SM00257 153 196 5.7E-17 T 12-10-2018 IPR018392 LysM domain BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 SMART SM00257 220 263 6.8E-17 T 12-10-2018 IPR018392 LysM domain BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 SUPERFAMILY SSF54106 218 263 3.01E-11 T 12-10-2018 BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 Pfam PF00877 NlpC/P60 family 309 409 1.2E-28 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 SUPERFAMILY SSF54106 27 71 3.79E-9 T 12-10-2018 BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 Gene3D G3DSA:3.90.1720.10 290 412 2.2E-33 T 12-10-2018 BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 SUPERFAMILY SSF54106 153 194 7.46E-11 T 12-10-2018 BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 Pfam PF01476 LysM domain 221 262 9.6E-15 T 12-10-2018 IPR018392 LysM domain BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 Pfam PF01476 LysM domain 30 71 2.0E-11 T 12-10-2018 IPR018392 LysM domain BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 Pfam PF01476 LysM domain 154 194 1.0E-14 T 12-10-2018 IPR018392 LysM domain BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 Pfam PF01476 LysM domain 89 130 5.1E-15 T 12-10-2018 IPR018392 LysM domain BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 SUPERFAMILY SSF54001 290 411 2.21E-33 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BAMF_2013 b552519b9f8e2714d807591813c6ac22 412 Gene3D G3DSA:3.10.350.10 206 274 8.6E-17 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_0827 baa087b4d06c3c4faf0aff48be5ef67e 101 Gene3D G3DSA:1.10.260.40 5 101 8.4E-15 T 12-10-2018 BAMF_0827 baa087b4d06c3c4faf0aff48be5ef67e 101 SMART SM00530 6 59 6.3E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_0827 baa087b4d06c3c4faf0aff48be5ef67e 101 SUPERFAMILY SSF47413 5 66 1.04E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_0827 baa087b4d06c3c4faf0aff48be5ef67e 101 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 7 61 2.3E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_2426 82fb1c8b9545dd325543ef3a4412ed4d 301 Gene3D G3DSA:3.30.300.20 186 300 5.2E-44 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BAMF_2426 82fb1c8b9545dd325543ef3a4412ed4d 301 Gene3D G3DSA:3.40.50.300 3 185 2.1E-47 T 12-10-2018 BAMF_2426 82fb1c8b9545dd325543ef3a4412ed4d 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 169 1.3E-27 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BAMF_2426 82fb1c8b9545dd325543ef3a4412ed4d 301 SUPERFAMILY SSF54814 182 297 2.52E-43 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BAMF_2426 82fb1c8b9545dd325543ef3a4412ed4d 301 Hamap MF_00367 GTPase Era [era]. 6 296 38.895 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2426 82fb1c8b9545dd325543ef3a4412ed4d 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 279 1.1E-118 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2426 82fb1c8b9545dd325543ef3a4412ed4d 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 102 2.8E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_2426 82fb1c8b9545dd325543ef3a4412ed4d 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 2.8E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_2426 82fb1c8b9545dd325543ef3a4412ed4d 301 Pfam PF07650 KH domain 208 285 3.9E-22 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_2426 82fb1c8b9545dd325543ef3a4412ed4d 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 2.7E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_2426 82fb1c8b9545dd325543ef3a4412ed4d 301 SUPERFAMILY SSF52540 11 206 2.96E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2334 dd9c5e8b4a2d51bc62887889aa3a955a 453 Pfam PF02601 Exonuclease VII, large subunit 131 444 4.3E-103 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 BAMF_2334 dd9c5e8b4a2d51bc62887889aa3a955a 453 Pfam PF13742 OB-fold nucleic acid binding domain 14 108 2.3E-31 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 BAMF_2334 dd9c5e8b4a2d51bc62887889aa3a955a 453 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 10 447 30.816 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 BAMF_2334 dd9c5e8b4a2d51bc62887889aa3a955a 453 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 14 364 5.2E-141 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 BAMF_1852 f2e852c171ea96f9a77b5d79398b9148 132 ProDom PD015812 YOPD YWLA YOAG 12 131 5.0E-37 T 12-10-2018 IPR031374 Uncharacterised protein family UPF0715 BAMF_1852 f2e852c171ea96f9a77b5d79398b9148 132 Pfam PF17094 Uncharacterised protein family (UPF0715) 12 130 1.2E-38 T 12-10-2018 IPR031374 Uncharacterised protein family UPF0715 BAMF_2697 0e755fa988abaa7473c3db70a5afd499 264 Gene3D G3DSA:1.20.120.1600 16 128 6.3E-47 T 12-10-2018 BAMF_2697 0e755fa988abaa7473c3db70a5afd499 264 Gene3D G3DSA:3.40.50.1000 2 251 6.3E-47 T 12-10-2018 IPR023214 HAD superfamily BAMF_2697 0e755fa988abaa7473c3db70a5afd499 264 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 117 231 9.9E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_2697 0e755fa988abaa7473c3db70a5afd499 264 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 231 5.8E-24 T 12-10-2018 BAMF_2697 0e755fa988abaa7473c3db70a5afd499 264 SUPERFAMILY SSF56784 1 259 5.65E-42 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_2697 0e755fa988abaa7473c3db70a5afd499 264 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 225 1.7E-13 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_0157 3786f83540f9a20726f1e099d4a0a4c8 254 Gene3D G3DSA:3.20.20.370 47 254 1.3E-57 T 12-10-2018 BAMF_0157 3786f83540f9a20726f1e099d4a0a4c8 254 TIGRFAM TIGR02764 spore_ybaN_pdaB: polysaccharide deacetylase family sporulation protein PdaB 53 243 4.0E-80 T 12-10-2018 IPR014132 Sporulation polysaccharide deacetylase, PdaB BAMF_0157 3786f83540f9a20726f1e099d4a0a4c8 254 Pfam PF01522 Polysaccharide deacetylase 52 174 3.7E-26 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BAMF_0157 3786f83540f9a20726f1e099d4a0a4c8 254 SUPERFAMILY SSF88713 22 243 4.2E-51 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BAMF_1749 f8548ef2bd9b63b7cfb0a4b1ed829b29 289 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 288 8.0E-123 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BAMF_1749 f8548ef2bd9b63b7cfb0a4b1ed829b29 289 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 288 64.005 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BAMF_1749 f8548ef2bd9b63b7cfb0a4b1ed829b29 289 PIRSF PIRSF001365 1 289 2.6E-96 T 12-10-2018 IPR002220 DapA-like GO:0016829 BAMF_1749 f8548ef2bd9b63b7cfb0a4b1ed829b29 289 SUPERFAMILY SSF51569 5 286 3.77E-101 T 12-10-2018 BAMF_1749 f8548ef2bd9b63b7cfb0a4b1ed829b29 289 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BAMF_1749 f8548ef2bd9b63b7cfb0a4b1ed829b29 289 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 BAMF_1749 f8548ef2bd9b63b7cfb0a4b1ed829b29 289 Gene3D G3DSA:3.20.20.70 1 289 9.2E-113 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_1749 f8548ef2bd9b63b7cfb0a4b1ed829b29 289 Pfam PF00701 Dihydrodipicolinate synthetase family 4 288 7.0E-122 T 12-10-2018 IPR002220 DapA-like GO:0016829 BAMF_1749 f8548ef2bd9b63b7cfb0a4b1ed829b29 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 6.6E-37 T 12-10-2018 IPR002220 DapA-like GO:0016829 BAMF_1749 f8548ef2bd9b63b7cfb0a4b1ed829b29 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 6.6E-37 T 12-10-2018 IPR002220 DapA-like GO:0016829 BAMF_1749 f8548ef2bd9b63b7cfb0a4b1ed829b29 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 6.6E-37 T 12-10-2018 IPR002220 DapA-like GO:0016829 BAMF_1749 f8548ef2bd9b63b7cfb0a4b1ed829b29 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 6.6E-37 T 12-10-2018 IPR002220 DapA-like GO:0016829 BAMF_1749 f8548ef2bd9b63b7cfb0a4b1ed829b29 289 SMART SM01130 2 289 2.4E-135 T 12-10-2018 IPR002220 DapA-like GO:0016829 BAMF_0373 409768f301a0647e5641e6c435dc42a4 404 Pfam PF01566 Natural resistance-associated macrophage protein 51 371 1.1E-20 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 Gene3D G3DSA:1.10.3500.10 114 493 3.1E-156 T 12-10-2018 IPR023323 Tex-like domain superfamily BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 Pfam PF00575 S1 RNA binding domain 646 717 2.4E-18 T 12-10-2018 IPR003029 S1 domain GO:0003676 BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 Pfam PF09371 Tex-like protein N-terminal domain 11 195 7.7E-69 T 12-10-2018 IPR018974 Tex-like protein, N-terminal BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 SUPERFAMILY SSF50249 633 717 8.95E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 Gene3D G3DSA:1.10.10.650 4 111 1.5E-37 T 12-10-2018 IPR023319 Tex-like protein, HTH domain superfamily BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 Pfam PF12836 Helix-hairpin-helix motif 486 550 8.5E-26 T 12-10-2018 BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 Gene3D G3DSA:2.40.50.140 632 719 1.5E-25 T 12-10-2018 BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 Gene3D G3DSA:3.30.420.140 320 446 3.1E-156 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 Pfam PF16921 Tex protein YqgF-like domain 321 446 7.7E-59 T 12-10-2018 IPR032639 Tex protein, YqgF-like domain BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 SUPERFAMILY SSF47781 556 630 1.45E-13 T 12-10-2018 IPR010994 RuvA domain 2-like BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 SMART SM00732 321 419 9.2E-39 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 SUPERFAMILY SSF53098 317 464 2.88E-51 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 Gene3D G3DSA:1.10.150.310 494 628 3.7E-44 T 12-10-2018 BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 SUPERFAMILY SSF158832 9 316 1.1E-108 T 12-10-2018 BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 SUPERFAMILY SSF47781 465 553 2.0E-26 T 12-10-2018 IPR010994 RuvA domain 2-like BAMF_0452 b9c219cb273fe85cd6c446e338c89f63 719 SMART SM00316 647 718 1.2E-23 T 12-10-2018 IPR022967 RNA-binding domain, S1 BAMF_1965 4e452e23d7712d6743af26108aa0e179 157 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 41 147 2.0E-7 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like BAMF_1839 4e452e23d7712d6743af26108aa0e179 157 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 41 147 2.0E-7 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like BAMF_3818 4e452e23d7712d6743af26108aa0e179 157 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 41 147 2.0E-7 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like BAMF_0380 99523434f0d19fd696821a50ef195e98 106 Gene3D G3DSA:3.30.70.100 1 95 2.3E-36 T 12-10-2018 BAMF_0380 99523434f0d19fd696821a50ef195e98 106 SUPERFAMILY SSF54909 1 95 2.74E-26 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BAMF_0380 99523434f0d19fd696821a50ef195e98 106 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 3.4E-13 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain BAMF_0446 dc53c2b920169130b591630f5f181803 133 SUPERFAMILY SSF55874 21 127 8.03E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0446 dc53c2b920169130b591630f5f181803 133 SMART SM00387 34 133 0.0015 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0446 dc53c2b920169130b591630f5f181803 133 Pfam PF13581 Histidine kinase-like ATPase domain 16 130 3.7E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0446 dc53c2b920169130b591630f5f181803 133 Gene3D G3DSA:3.30.565.10 6 130 1.8E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0056 155093f3f957ce3a93798c4d8c19d361 178 PIRSF PIRSF026579 1 178 1.1E-96 T 12-10-2018 IPR014213 Sporulation stage V, protein T BAMF_0056 155093f3f957ce3a93798c4d8c19d361 178 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 2 177 1.9E-90 T 12-10-2018 IPR014213 Sporulation stage V, protein T BAMF_0056 155093f3f957ce3a93798c4d8c19d361 178 Gene3D G3DSA:3.30.450.40 56 178 3.8E-47 T 12-10-2018 IPR029016 GAF-like domain superfamily BAMF_0056 155093f3f957ce3a93798c4d8c19d361 178 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 51 1.1E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BAMF_0056 155093f3f957ce3a93798c4d8c19d361 178 SMART SM00966 8 52 1.1E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BAMF_0056 155093f3f957ce3a93798c4d8c19d361 178 SUPERFAMILY SSF55781 107 177 3.07E-5 T 12-10-2018 BAMF_0056 155093f3f957ce3a93798c4d8c19d361 178 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 54 177 1.9E-46 T 12-10-2018 IPR039472 Sporulation stage V protein T, GAF domain BAMF_0056 155093f3f957ce3a93798c4d8c19d361 178 SUPERFAMILY SSF89447 1 52 9.03E-15 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily BAMF_0056 155093f3f957ce3a93798c4d8c19d361 178 Gene3D G3DSA:2.10.260.10 1 49 3.8E-24 T 12-10-2018 BAMF_0056 155093f3f957ce3a93798c4d8c19d361 178 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 1.2E-15 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BAMF_3922 6b28e8f76ddbd446b8e61ad3efd9b3f5 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 26 9.0E-8 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3922 6b28e8f76ddbd446b8e61ad3efd9b3f5 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.77 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3922 6b28e8f76ddbd446b8e61ad3efd9b3f5 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 12-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_3922 6b28e8f76ddbd446b8e61ad3efd9b3f5 44 Pfam PF00468 Ribosomal protein L34 1 44 5.7E-23 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3922 6b28e8f76ddbd446b8e61ad3efd9b3f5 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 2.1E-20 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2630 9dcd0056eae37454ea00fe08a776bd33 424 SUPERFAMILY SSF54534 89 243 9.62E-38 T 12-10-2018 BAMF_2630 9dcd0056eae37454ea00fe08a776bd33 424 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 239 3.7E-15 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BAMF_2630 9dcd0056eae37454ea00fe08a776bd33 424 SUPERFAMILY SSF102735 1 130 3.14E-39 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 BAMF_2630 9dcd0056eae37454ea00fe08a776bd33 424 Gene3D G3DSA:1.10.3120.10 115 423 3.7E-95 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 BAMF_2630 9dcd0056eae37454ea00fe08a776bd33 424 Gene3D G3DSA:3.10.50.40 151 248 3.7E-95 T 12-10-2018 BAMF_2630 9dcd0056eae37454ea00fe08a776bd33 424 Gene3D G3DSA:3.30.70.1050 3 114 3.7E-32 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 BAMF_2630 9dcd0056eae37454ea00fe08a776bd33 424 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 1.3E-45 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 BAMF_2630 9dcd0056eae37454ea00fe08a776bd33 424 Hamap MF_00303 Trigger factor [tig]. 1 424 23.5 T 12-10-2018 IPR005215 Trigger factor GO:0015031 BAMF_2630 9dcd0056eae37454ea00fe08a776bd33 424 SUPERFAMILY SSF109998 250 423 1.31E-41 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily BAMF_2630 9dcd0056eae37454ea00fe08a776bd33 424 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 422 8.4E-46 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 BAMF_2630 9dcd0056eae37454ea00fe08a776bd33 424 TIGRFAM TIGR00115 tig: trigger factor 12 421 5.3E-143 T 12-10-2018 IPR005215 Trigger factor GO:0015031 BAMF_2630 9dcd0056eae37454ea00fe08a776bd33 424 PIRSF PIRSF003095 1 424 3.3E-137 T 12-10-2018 IPR005215 Trigger factor GO:0015031 BAMF_3605 7098d5e84a4ac17fcf07131ef7957f3d 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 251 8.6E-71 T 12-10-2018 BAMF_3605 7098d5e84a4ac17fcf07131ef7957f3d 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_3605 7098d5e84a4ac17fcf07131ef7957f3d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.9E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3605 7098d5e84a4ac17fcf07131ef7957f3d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.9E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3605 7098d5e84a4ac17fcf07131ef7957f3d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.9E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3605 7098d5e84a4ac17fcf07131ef7957f3d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.9E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3605 7098d5e84a4ac17fcf07131ef7957f3d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.9E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3605 7098d5e84a4ac17fcf07131ef7957f3d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.9E-47 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3605 7098d5e84a4ac17fcf07131ef7957f3d 253 SUPERFAMILY SSF51735 5 252 2.14E-85 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3605 7098d5e84a4ac17fcf07131ef7957f3d 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.7E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3605 7098d5e84a4ac17fcf07131ef7957f3d 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.7E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3605 7098d5e84a4ac17fcf07131ef7957f3d 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.7E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3605 7098d5e84a4ac17fcf07131ef7957f3d 253 Gene3D G3DSA:3.40.50.720 1 253 4.0E-92 T 12-10-2018 BAMF_1025 d583451663dae3f8a689f7624735cdba 496 PIRSF PIRSF000538 2 495 5.4E-183 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BAMF_1025 d583451663dae3f8a689f7624735cdba 496 SUPERFAMILY SSF53067 4 254 5.95E-100 T 12-10-2018 BAMF_1025 d583451663dae3f8a689f7624735cdba 496 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BAMF_1025 d583451663dae3f8a689f7624735cdba 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BAMF_1025 d583451663dae3f8a689f7624735cdba 496 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 493 9.8E-229 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 BAMF_1025 d583451663dae3f8a689f7624735cdba 496 SUPERFAMILY SSF53067 254 492 7.03E-88 T 12-10-2018 BAMF_1025 d583451663dae3f8a689f7624735cdba 496 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 59.706 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 BAMF_1025 d583451663dae3f8a689f7624735cdba 496 Gene3D G3DSA:3.30.420.40 253 496 7.6E-93 T 12-10-2018 BAMF_1025 d583451663dae3f8a689f7624735cdba 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 8.4E-95 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BAMF_1025 d583451663dae3f8a689f7624735cdba 496 Gene3D G3DSA:3.30.420.40 1 252 6.0E-115 T 12-10-2018 BAMF_1025 d583451663dae3f8a689f7624735cdba 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 449 3.6E-66 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BAMF_0210 311cca0d542f570e4b5af0e4c3246a50 355 Gene3D G3DSA:1.20.1090.10 154 354 6.8E-56 T 12-10-2018 BAMF_0210 311cca0d542f570e4b5af0e4c3246a50 355 PIRSF PIRSF000112 1 354 1.1E-108 T 12-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 BAMF_0210 311cca0d542f570e4b5af0e4c3246a50 355 Gene3D G3DSA:3.40.50.1970 8 151 2.7E-23 T 12-10-2018 BAMF_0210 311cca0d542f570e4b5af0e4c3246a50 355 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 330 4.2E-48 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BAMF_0210 311cca0d542f570e4b5af0e4c3246a50 355 SUPERFAMILY SSF56796 11 347 2.88E-57 T 12-10-2018 BAMF_0040 03823840aa32945fd9e2212667c7c280 445 SUPERFAMILY SSF50685 385 427 1.92E-8 T 12-10-2018 IPR036908 RlpA-like domain superfamily BAMF_0040 03823840aa32945fd9e2212667c7c280 445 Pfam PF07501 G5 domain 256 328 3.5E-19 T 12-10-2018 IPR011098 G5 domain BAMF_0040 03823840aa32945fd9e2212667c7c280 445 SMART SM01208 251 329 3.5E-25 T 12-10-2018 IPR011098 G5 domain BAMF_0040 03823840aa32945fd9e2212667c7c280 445 Pfam PF06725 3D domain 384 445 1.5E-20 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 BAMF_0040 03823840aa32945fd9e2212667c7c280 445 Pfam PF03990 Domain of unknown function (DUF348) 197 236 1.9E-12 T 12-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 BAMF_0040 03823840aa32945fd9e2212667c7c280 445 Pfam PF03990 Domain of unknown function (DUF348) 143 180 5.6E-9 T 12-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 BAMF_0040 03823840aa32945fd9e2212667c7c280 445 Pfam PF03990 Domain of unknown function (DUF348) 83 121 3.6E-12 T 12-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 BAMF_0040 03823840aa32945fd9e2212667c7c280 445 Gene3D G3DSA:2.20.230.10 252 329 1.0E-16 T 12-10-2018 BAMF_0040 03823840aa32945fd9e2212667c7c280 445 Gene3D G3DSA:2.40.40.10 353 433 1.2E-5 T 12-10-2018 IPR036908 RlpA-like domain superfamily BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1181 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 Gene3D G3DSA:1.10.40.90 363 405 1.3E-23 T 12-10-2018 BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 331 8.1E-90 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 Gene3D G3DSA:1.10.150.390 1130 1190 1.8E-28 T 12-10-2018 BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 Gene3D G3DSA:1.10.1790.20 950 1128 3.2E-66 T 12-10-2018 BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 386 5.5E-9 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 Pfam PF00623 RNA polymerase Rpb1, domain 2 378 474 2.0E-29 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 SUPERFAMILY SSF64484 5 1181 0.0 T 12-10-2018 BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 Gene3D G3DSA:1.10.274.100 479 659 4.0E-47 T 12-10-2018 BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 663 3.4E-36 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 Pfam PF04998 RNA polymerase Rpb1, domain 5 770 1129 4.4E-67 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 Pfam PF05000 RNA polymerase Rpb1, domain 4 692 759 2.6E-14 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 Gene3D G3DSA:2.40.50.100 966 1029 3.2E-66 T 12-10-2018 BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1192 18.73 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 Gene3D G3DSA:1.10.132.30 660 794 2.9E-60 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_0108 c144f1e7859c7b253206a5e150dbaea6 1199 SMART SM00663 224 503 2.2E-185 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_2754 12555e8ca5af91f49acde7805a75e640 270 SUPERFAMILY SSF89550 4 265 5.49E-36 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BAMF_2754 12555e8ca5af91f49acde7805a75e640 270 Pfam PF13263 PHP-associated 236 261 1.4E-5 T 12-10-2018 BAMF_2754 12555e8ca5af91f49acde7805a75e640 270 Gene3D G3DSA:3.20.20.140 2 270 3.0E-70 T 12-10-2018 BAMF_2754 12555e8ca5af91f49acde7805a75e640 270 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 4 265 2.8E-84 T 12-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 BAMF_2754 12555e8ca5af91f49acde7805a75e640 270 Pfam PF02811 PHP domain 5 218 1.2E-13 T 12-10-2018 IPR004013 PHP domain GO:0003824 BAMF_0322 86cb229253be5db82fc9e7134b3c592a 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.1E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_0322 86cb229253be5db82fc9e7134b3c592a 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.1E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_0322 86cb229253be5db82fc9e7134b3c592a 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.1E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_0322 86cb229253be5db82fc9e7134b3c592a 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.5E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_0322 86cb229253be5db82fc9e7134b3c592a 290 Pfam PF03466 LysR substrate binding domain 88 289 5.8E-34 T 12-10-2018 IPR005119 LysR, substrate-binding BAMF_0322 86cb229253be5db82fc9e7134b3c592a 290 Gene3D G3DSA:1.10.10.10 1 81 5.5E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0322 86cb229253be5db82fc9e7134b3c592a 290 SUPERFAMILY SSF53850 90 289 5.97E-32 T 12-10-2018 BAMF_0322 86cb229253be5db82fc9e7134b3c592a 290 Gene3D G3DSA:3.40.190.290 92 290 3.4E-37 T 12-10-2018 BAMF_0322 86cb229253be5db82fc9e7134b3c592a 290 SUPERFAMILY SSF46785 1 88 1.64E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3321 9967933a3f8061ff8898f6f1b9919344 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.3E-22 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BAMF_3321 9967933a3f8061ff8898f6f1b9919344 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.3E-22 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BAMF_3321 9967933a3f8061ff8898f6f1b9919344 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.3E-22 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BAMF_3321 9967933a3f8061ff8898f6f1b9919344 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 8.4E-32 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BAMF_3321 9967933a3f8061ff8898f6f1b9919344 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 5.1E-32 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BAMF_3321 9967933a3f8061ff8898f6f1b9919344 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BAMF_3321 9967933a3f8061ff8898f6f1b9919344 85 SUPERFAMILY SSF55594 3 84 2.75E-28 T 12-10-2018 IPR035895 HPr-like superfamily BAMF_3321 9967933a3f8061ff8898f6f1b9919344 85 Gene3D G3DSA:3.30.1340.10 1 85 3.0E-37 T 12-10-2018 IPR035895 HPr-like superfamily BAMF_1981 4841a12b821b430b3bed17db541c4f5c 239 Gene3D G3DSA:3.60.15.10 5 235 4.2E-37 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_1981 4841a12b821b430b3bed17db541c4f5c 239 SUPERFAMILY SSF56281 7 227 2.1E-40 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_1981 4841a12b821b430b3bed17db541c4f5c 239 Pfam PF00753 Metallo-beta-lactamase superfamily 19 212 2.4E-28 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_1981 4841a12b821b430b3bed17db541c4f5c 239 SMART SM00849 20 212 1.2E-28 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_0666 58d1ee6b62137b84d04f27e5e3db145a 1047 SUPERFAMILY SSF82693 134 340 4.71E-17 T 12-10-2018 BAMF_0666 58d1ee6b62137b84d04f27e5e3db145a 1047 SUPERFAMILY SSF82693 41 133 2.59E-21 T 12-10-2018 BAMF_0666 58d1ee6b62137b84d04f27e5e3db145a 1047 SUPERFAMILY SSF82866 319 520 6.15E-44 T 12-10-2018 BAMF_0666 58d1ee6b62137b84d04f27e5e3db145a 1047 SUPERFAMILY SSF82714 184 248 3.53E-5 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BAMF_0666 58d1ee6b62137b84d04f27e5e3db145a 1047 Pfam PF00873 AcrB/AcrD/AcrF family 4 245 2.4E-46 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BAMF_0666 58d1ee6b62137b84d04f27e5e3db145a 1047 Pfam PF00873 AcrB/AcrD/AcrF family 283 1033 7.1E-164 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BAMF_0666 58d1ee6b62137b84d04f27e5e3db145a 1047 SUPERFAMILY SSF82866 816 1040 2.75E-45 T 12-10-2018 BAMF_0666 58d1ee6b62137b84d04f27e5e3db145a 1047 SUPERFAMILY SSF82714 731 814 2.88E-13 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BAMF_0666 58d1ee6b62137b84d04f27e5e3db145a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 8.0E-45 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BAMF_0666 58d1ee6b62137b84d04f27e5e3db145a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 413 437 8.0E-45 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BAMF_0666 58d1ee6b62137b84d04f27e5e3db145a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 8.0E-45 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BAMF_0666 58d1ee6b62137b84d04f27e5e3db145a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 8.0E-45 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BAMF_0666 58d1ee6b62137b84d04f27e5e3db145a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 358 381 8.0E-45 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BAMF_0666 58d1ee6b62137b84d04f27e5e3db145a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 494 517 8.0E-45 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BAMF_0666 58d1ee6b62137b84d04f27e5e3db145a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 385 406 8.0E-45 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BAMF_2024 3e0a3bbbbbf3c460740dec31fd95ca3c 129 SUPERFAMILY SSF55331 2 127 2.59E-40 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily BAMF_2024 3e0a3bbbbbf3c460740dec31fd95ca3c 129 Pfam PF14552 Tautomerase enzyme 38 118 6.2E-32 T 12-10-2018 IPR037479 Tautomerase, MSAD family BAMF_2024 3e0a3bbbbbf3c460740dec31fd95ca3c 129 Gene3D G3DSA:3.30.429.10 1 129 3.7E-48 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily BAMF_3636 dc9b10b187c7d28ef63b80baf005d147 479 SMART SM00640 33 444 6.0E-137 T 12-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 BAMF_3636 dc9b10b187c7d28ef63b80baf005d147 479 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 17 454 3.8E-172 T 12-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 BAMF_3636 dc9b10b187c7d28ef63b80baf005d147 479 SUPERFAMILY SSF49899 340 478 2.29E-16 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BAMF_3636 dc9b10b187c7d28ef63b80baf005d147 479 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 394 476 2.2E-9 T 12-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal BAMF_3636 dc9b10b187c7d28ef63b80baf005d147 479 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 33 46 - T 12-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 BAMF_3636 dc9b10b187c7d28ef63b80baf005d147 479 Gene3D G3DSA:2.115.10.20 2 351 2.3E-115 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BAMF_3636 dc9b10b187c7d28ef63b80baf005d147 479 Gene3D G3DSA:2.60.120.560 352 478 6.5E-12 T 12-10-2018 BAMF_3636 dc9b10b187c7d28ef63b80baf005d147 479 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 33 338 1.4E-102 T 12-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal BAMF_3636 dc9b10b187c7d28ef63b80baf005d147 479 SUPERFAMILY SSF75005 24 338 1.41E-110 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BAMF_0995 5ba7f7e78101baa0f1aa8e1c24accc6d 392 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 7 385 31.332 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 BAMF_0995 5ba7f7e78101baa0f1aa8e1c24accc6d 392 Pfam PF04285 Protein of unknown function (DUF444) 195 383 1.6E-67 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 BAMF_0995 5ba7f7e78101baa0f1aa8e1c24accc6d 392 Pfam PF04285 Protein of unknown function (DUF444) 11 186 4.8E-34 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 BAMF_0995 5ba7f7e78101baa0f1aa8e1c24accc6d 392 TIGRFAM TIGR02877 spore_yhbH: sporulation protein YhbH 9 380 6.8E-187 T 12-10-2018 IPR014230 Sporulation protein YhbH BAMF_1716 ae4964e184e781958e677cd3723af867 157 SMART SM00260 6 143 3.7E-40 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BAMF_1716 ae4964e184e781958e677cd3723af867 157 SUPERFAMILY SSF50341 10 144 4.84E-34 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BAMF_1716 ae4964e184e781958e677cd3723af867 157 Pfam PF01584 CheW-like domain 11 144 5.9E-32 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BAMF_1716 ae4964e184e781958e677cd3723af867 157 Gene3D G3DSA:2.40.50.180 29 138 1.8E-37 T 12-10-2018 BAMF_1716 ae4964e184e781958e677cd3723af867 157 Gene3D G3DSA:2.30.30.40 12 137 1.8E-37 T 12-10-2018 BAMF_2231 6623380e0f2de6d4ba3c379adb3327a4 162 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 26 155 5.5E-41 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BAMF_2231 6623380e0f2de6d4ba3c379adb3327a4 162 Gene3D G3DSA:2.40.100.10 18 162 7.6E-58 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily BAMF_2231 6623380e0f2de6d4ba3c379adb3327a4 162 SUPERFAMILY SSF50891 26 156 5.55E-47 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily BAMF_2231 6623380e0f2de6d4ba3c379adb3327a4 162 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 58 75 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 BAMF_2231 6623380e0f2de6d4ba3c379adb3327a4 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 146 1.9E-23 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BAMF_2231 6623380e0f2de6d4ba3c379adb3327a4 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 118 1.9E-23 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BAMF_2231 6623380e0f2de6d4ba3c379adb3327a4 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 37 52 1.9E-23 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BAMF_2231 6623380e0f2de6d4ba3c379adb3327a4 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 63 75 1.9E-23 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BAMF_2231 6623380e0f2de6d4ba3c379adb3327a4 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 130 1.9E-23 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BAMF_2231 6623380e0f2de6d4ba3c379adb3327a4 162 PIRSF PIRSF001467 7 161 8.4E-41 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 BAMF_2049 f071b2349611073b1b42a3dfc1eaa289 285 TIGRFAM TIGR03827 GNAT_ablB: putative beta-lysine N-acetyltransferase 17 280 1.1E-91 T 12-10-2018 IPR022525 Beta-lysine N-acetyltransferase GO:0016407 BAMF_2049 f071b2349611073b1b42a3dfc1eaa289 285 SUPERFAMILY SSF55729 130 280 3.37E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_2049 f071b2349611073b1b42a3dfc1eaa289 285 Gene3D G3DSA:3.40.630.30 20 262 3.3E-11 T 12-10-2018 BAMF_2049 f071b2349611073b1b42a3dfc1eaa289 285 Pfam PF00583 Acetyltransferase (GNAT) family 168 239 1.1E-7 T 12-10-2018 IPR000182 GNAT domain BAMF_0534 9f8f6a9035a58ace3d402ccbf31d0e7b 215 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 3 209 37.911 T 12-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 BAMF_0534 9f8f6a9035a58ace3d402ccbf31d0e7b 215 Gene3D G3DSA:1.10.10.10 1 82 3.5E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0534 9f8f6a9035a58ace3d402ccbf31d0e7b 215 Pfam PF06971 Putative DNA-binding protein N-terminus 7 55 1.4E-19 T 12-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 BAMF_0534 9f8f6a9035a58ace3d402ccbf31d0e7b 215 SUPERFAMILY SSF46785 9 80 2.9E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0534 9f8f6a9035a58ace3d402ccbf31d0e7b 215 SMART SM00881 81 180 2.8E-16 T 12-10-2018 IPR003781 CoA-binding GO:0048037 BAMF_0534 9f8f6a9035a58ace3d402ccbf31d0e7b 215 Gene3D G3DSA:3.40.50.720 83 215 1.3E-49 T 12-10-2018 BAMF_0534 9f8f6a9035a58ace3d402ccbf31d0e7b 215 SUPERFAMILY SSF51735 84 207 6.17E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0534 9f8f6a9035a58ace3d402ccbf31d0e7b 215 Pfam PF02629 CoA binding domain 83 178 3.3E-29 T 12-10-2018 IPR003781 CoA-binding GO:0048037 BAMF_3273 d2fd34da3543a3d841752e1618af1dd0 437 PRINTS PR00045 Sigma-54 factor signature 147 164 1.0E-24 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BAMF_3273 d2fd34da3543a3d841752e1618af1dd0 437 PRINTS PR00045 Sigma-54 factor signature 351 362 1.0E-24 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BAMF_3273 d2fd34da3543a3d841752e1618af1dd0 437 PRINTS PR00045 Sigma-54 factor signature 335 347 1.0E-24 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BAMF_3273 d2fd34da3543a3d841752e1618af1dd0 437 PRINTS PR00045 Sigma-54 factor signature 410 428 1.0E-24 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BAMF_3273 d2fd34da3543a3d841752e1618af1dd0 437 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 415 422 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BAMF_3273 d2fd34da3543a3d841752e1618af1dd0 437 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 49 5.0E-12 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BAMF_3273 d2fd34da3543a3d841752e1618af1dd0 437 Pfam PF04963 Sigma-54 factor, core binding domain 78 262 5.3E-48 T 12-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 BAMF_3273 d2fd34da3543a3d841752e1618af1dd0 437 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 323 342 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BAMF_3273 d2fd34da3543a3d841752e1618af1dd0 437 Gene3D G3DSA:1.10.10.1330 81 196 8.7E-28 T 12-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily BAMF_3273 d2fd34da3543a3d841752e1618af1dd0 437 PIRSF PIRSF000774 1 437 4.0E-122 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BAMF_3273 d2fd34da3543a3d841752e1618af1dd0 437 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 12 434 2.1E-134 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BAMF_3273 d2fd34da3543a3d841752e1618af1dd0 437 Gene3D G3DSA:1.10.10.60 376 434 3.2E-22 T 12-10-2018 BAMF_3273 d2fd34da3543a3d841752e1618af1dd0 437 Pfam PF04552 Sigma-54, DNA binding domain 276 435 1.8E-60 T 12-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding BAMF_1607 3bdf1cc4d9615ecf1e088bb2bf13108d 83 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 4 75 2.3E-26 T 12-10-2018 IPR014238 Sporulation protein YlmC/YmxH BAMF_1607 3bdf1cc4d9615ecf1e088bb2bf13108d 83 Pfam PF05239 PRC-barrel domain 2 77 4.1E-14 T 12-10-2018 IPR027275 PRC-barrel domain BAMF_1607 3bdf1cc4d9615ecf1e088bb2bf13108d 83 Gene3D G3DSA:2.30.30.240 1 78 2.0E-12 T 12-10-2018 BAMF_1607 3bdf1cc4d9615ecf1e088bb2bf13108d 83 SUPERFAMILY SSF50346 1 74 2.35E-14 T 12-10-2018 IPR011033 PRC-barrel-like superfamily BAMF_3550 3bb9ade974b0dc2033b261e7c097c82a 124 Pfam PF00072 Response regulator receiver domain 6 116 4.4E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3550 3bb9ade974b0dc2033b261e7c097c82a 124 Gene3D G3DSA:3.40.50.2300 1 124 3.4E-44 T 12-10-2018 BAMF_3550 3bb9ade974b0dc2033b261e7c097c82a 124 SUPERFAMILY SSF52172 4 120 5.55E-36 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_3550 3bb9ade974b0dc2033b261e7c097c82a 124 SMART SM00448 4 115 1.3E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3849 af5849258ade9637611c44a5d4c69ab5 396 Gene3D G3DSA:1.20.1250.20 2 380 7.4E-43 T 12-10-2018 BAMF_3849 af5849258ade9637611c44a5d4c69ab5 396 SUPERFAMILY SSF103473 9 385 2.62E-45 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3849 af5849258ade9637611c44a5d4c69ab5 396 ProSitePatterns PS00216 Sugar transport proteins signature 1. 55 71 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_3849 af5849258ade9637611c44a5d4c69ab5 396 Pfam PF07690 Major Facilitator Superfamily 11 228 1.2E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_3575 1be07926a64ee4c8cf2929fbef7ee4e8 276 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 80 93 - T 12-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BAMF_3575 1be07926a64ee4c8cf2929fbef7ee4e8 276 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 4 276 41.706 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BAMF_3575 1be07926a64ee4c8cf2929fbef7ee4e8 276 Pfam PF01564 Spermine/spermidine synthase domain 59 237 1.0E-69 T 12-10-2018 BAMF_3575 1be07926a64ee4c8cf2929fbef7ee4e8 276 TIGRFAM TIGR00417 speE: spermidine synthase 5 270 1.8E-124 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BAMF_3575 1be07926a64ee4c8cf2929fbef7ee4e8 276 Pfam PF17284 Spermidine synthase tetramerisation domain 4 56 1.9E-21 T 12-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BAMF_3575 1be07926a64ee4c8cf2929fbef7ee4e8 276 Gene3D G3DSA:3.40.50.150 54 275 6.2E-76 T 12-10-2018 BAMF_3575 1be07926a64ee4c8cf2929fbef7ee4e8 276 Gene3D G3DSA:2.30.140.10 2 53 3.6E-26 T 12-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BAMF_3575 1be07926a64ee4c8cf2929fbef7ee4e8 276 SUPERFAMILY SSF53335 4 275 1.85E-89 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_2320 c5bfcc7a6f367a4f0955d8a17c47c639 210 Gene3D G3DSA:1.10.260.40 9 127 4.2E-10 T 12-10-2018 BAMF_2320 c5bfcc7a6f367a4f0955d8a17c47c639 210 Pfam PF06803 Protein of unknown function (DUF1232) 167 200 1.1E-8 T 12-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 BAMF_2320 c5bfcc7a6f367a4f0955d8a17c47c639 210 Pfam PF01381 Helix-turn-helix 13 67 3.0E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_2320 c5bfcc7a6f367a4f0955d8a17c47c639 210 SUPERFAMILY SSF47413 6 71 1.66E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_2320 c5bfcc7a6f367a4f0955d8a17c47c639 210 SMART SM00530 12 67 1.9E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_1017 5607dc1c449ab515208bd269ffec3b28 302 Gene3D G3DSA:3.30.2350.10 83 300 1.1E-70 T 12-10-2018 BAMF_1017 5607dc1c449ab515208bd269ffec3b28 302 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 299 6.3E-90 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_1017 5607dc1c449ab515208bd269ffec3b28 302 Pfam PF00849 RNA pseudouridylate synthase 91 244 7.4E-34 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_1017 5607dc1c449ab515208bd269ffec3b28 302 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_1017 5607dc1c449ab515208bd269ffec3b28 302 SUPERFAMILY SSF55120 76 298 2.24E-68 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_2671 8ee2200c49d94afb922648de8e5c1c4d 257 Gene3D G3DSA:3.40.1280.10 108 257 1.8E-48 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BAMF_2671 8ee2200c49d94afb922648de8e5c1c4d 257 SUPERFAMILY SSF55315 11 106 3.77E-22 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BAMF_2671 8ee2200c49d94afb922648de8e5c1c4d 257 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 40 107 2.3E-7 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BAMF_2671 8ee2200c49d94afb922648de8e5c1c4d 257 SMART SM00967 40 108 2.0E-11 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BAMF_2671 8ee2200c49d94afb922648de8e5c1c4d 257 Gene3D G3DSA:3.30.1330.30 11 106 2.1E-23 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BAMF_2671 8ee2200c49d94afb922648de8e5c1c4d 257 Pfam PF00588 SpoU rRNA Methylase family 116 253 1.3E-33 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BAMF_2671 8ee2200c49d94afb922648de8e5c1c4d 257 SUPERFAMILY SSF75217 109 256 2.81E-39 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases BAMF_2387 3ff7f811803e68347636682e2a2909ae 70 Gene3D G3DSA:1.10.287.760 1 68 6.4E-25 T 12-10-2018 IPR023164 YqgQ-like superfamily BAMF_2387 3ff7f811803e68347636682e2a2909ae 70 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 59 7.8E-25 T 12-10-2018 IPR009256 Protein of unknown function DUF910 BAMF_2387 3ff7f811803e68347636682e2a2909ae 70 SUPERFAMILY SSF158379 1 59 1.96E-21 T 12-10-2018 IPR023164 YqgQ-like superfamily BAMF_0637 11e56e0c98415bfbd6c2246218c3a01a 393 Pfam PF02222 ATP-grasp domain 130 299 1.3E-60 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BAMF_0637 11e56e0c98415bfbd6c2246218c3a01a 393 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 25 374 42.17 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 BAMF_0637 11e56e0c98415bfbd6c2246218c3a01a 393 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 26 379 4.0E-139 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 BAMF_0637 11e56e0c98415bfbd6c2246218c3a01a 393 Gene3D G3DSA:3.30.1490.20 131 199 1.7E-26 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BAMF_0637 11e56e0c98415bfbd6c2246218c3a01a 393 Gene3D G3DSA:3.30.470.20 200 387 5.4E-72 T 12-10-2018 BAMF_0637 11e56e0c98415bfbd6c2246218c3a01a 393 SUPERFAMILY SSF52440 21 107 2.59E-25 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BAMF_0637 11e56e0c98415bfbd6c2246218c3a01a 393 SUPERFAMILY SSF56059 121 319 2.42E-62 T 12-10-2018 BAMF_0637 11e56e0c98415bfbd6c2246218c3a01a 393 Gene3D G3DSA:3.40.50.20 12 130 6.3E-45 T 12-10-2018 BAMF_0637 11e56e0c98415bfbd6c2246218c3a01a 393 SUPERFAMILY SSF51246 323 386 5.26E-13 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BAMF_0637 11e56e0c98415bfbd6c2246218c3a01a 393 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 26 87 2.5E-4 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 BAMF_2276 0895b9932bb6af36b87c6b8f91023a37 319 Pfam PF00753 Metallo-beta-lactamase superfamily 21 231 3.2E-21 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_2276 0895b9932bb6af36b87c6b8f91023a37 319 SMART SM00849 19 231 1.0E-20 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_2276 0895b9932bb6af36b87c6b8f91023a37 319 Gene3D G3DSA:3.60.15.10 2 258 7.0E-49 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_2276 0895b9932bb6af36b87c6b8f91023a37 319 SUPERFAMILY SSF56281 5 302 3.67E-45 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_3561 bc157735dc109eb1c717350675f78885 184 Pfam PF02613 Nitrate reductase delta subunit 41 155 2.8E-7 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone BAMF_3561 bc157735dc109eb1c717350675f78885 184 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 14 165 1.2E-62 T 12-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 BAMF_3561 bc157735dc109eb1c717350675f78885 184 Gene3D G3DSA:1.20.120.700 13 163 2.2E-12 T 12-10-2018 BAMF_3561 bc157735dc109eb1c717350675f78885 184 Gene3D G3DSA:1.10.4070.10 72 154 2.2E-12 T 12-10-2018 BAMF_3561 bc157735dc109eb1c717350675f78885 184 SUPERFAMILY SSF89155 6 169 3.01E-30 T 12-10-2018 IPR036411 TorD-like superfamily BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 Gene3D G3DSA:1.10.287.130 268 343 2.9E-18 T 12-10-2018 BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 Gene3D G3DSA:3.30.565.10 344 497 5.8E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 SMART SM00387 392 498 2.0E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 Gene3D G3DSA:3.30.450.20 48 225 1.9E-60 T 12-10-2018 BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 476 3.4E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 495 3.4E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 443 3.4E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 457 3.4E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 SUPERFAMILY SSF55874 350 495 6.94E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 Pfam PF00512 His Kinase A (phospho-acceptor) domain 286 347 3.7E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 SMART SM00388 284 349 3.5E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 496 1.3E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 SUPERFAMILY SSF103190 79 183 7.85E-13 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 Gene3D G3DSA:3.30.450.20 77 175 1.9E-60 T 12-10-2018 BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 Pfam PF02743 Cache domain 50 203 8.7E-20 T 12-10-2018 IPR033479 Double Cache domain 1 BAMF_1445 e72fa4e434cc4da798308ce2391da061 499 SUPERFAMILY SSF47384 274 349 3.92E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_2034 7daf5b7bc5caf8daa1c3310e7ccb314f 468 SMART SM00228 104 175 4.1E-18 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_2034 7daf5b7bc5caf8daa1c3310e7ccb314f 468 Gene3D G3DSA:2.30.42.10 104 190 3.6E-96 T 12-10-2018 BAMF_2034 7daf5b7bc5caf8daa1c3310e7ccb314f 468 Gene3D G3DSA:3.30.750.44 49 339 3.6E-96 T 12-10-2018 BAMF_2034 7daf5b7bc5caf8daa1c3310e7ccb314f 468 Pfam PF03572 Peptidase family S41 202 363 1.6E-49 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BAMF_2034 7daf5b7bc5caf8daa1c3310e7ccb314f 468 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 55 380 1.2E-123 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 BAMF_2034 7daf5b7bc5caf8daa1c3310e7ccb314f 468 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 104 171 2.5E-13 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_2034 7daf5b7bc5caf8daa1c3310e7ccb314f 468 Gene3D G3DSA:1.10.101.10 373 452 6.8E-14 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BAMF_2034 7daf5b7bc5caf8daa1c3310e7ccb314f 468 Pfam PF01471 Putative peptidoglycan binding domain 386 440 7.6E-13 T 12-10-2018 IPR002477 Peptidoglycan binding-like BAMF_2034 7daf5b7bc5caf8daa1c3310e7ccb314f 468 SMART SM00245 176 364 3.3E-77 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BAMF_2034 7daf5b7bc5caf8daa1c3310e7ccb314f 468 SUPERFAMILY SSF52096 42 368 1.46E-71 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_2034 7daf5b7bc5caf8daa1c3310e7ccb314f 468 SUPERFAMILY SSF47090 375 444 7.72E-14 T 12-10-2018 IPR036365 PGBD-like superfamily BAMF_2034 7daf5b7bc5caf8daa1c3310e7ccb314f 468 SUPERFAMILY SSF50156 99 175 1.53E-17 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BAMF_2034 7daf5b7bc5caf8daa1c3310e7ccb314f 468 Gene3D G3DSA:3.90.226.10 191 361 3.6E-96 T 12-10-2018 BAMF_1470 e2e0d3aa27c2cd4a60f43ed96d12c6fa 342 Gene3D G3DSA:3.80.30.30 116 342 1.7E-91 T 12-10-2018 BAMF_1470 e2e0d3aa27c2cd4a60f43ed96d12c6fa 342 SUPERFAMILY SSF102114 85 311 5.36E-7 T 12-10-2018 BAMF_1470 e2e0d3aa27c2cd4a60f43ed96d12c6fa 342 Gene3D G3DSA:3.40.50.12110 3 115 2.4E-46 T 12-10-2018 BAMF_1470 e2e0d3aa27c2cd4a60f43ed96d12c6fa 342 TIGRFAM TIGR04070 photo_TT_lyase: spore photoproduct lyase 5 342 8.2E-156 T 12-10-2018 IPR023897 Spore photoproduct lyase GO:0003913 BAMF_1479 ae1bc4c0ab50616ba541cccacfd6c84a 154 Pfam PF14177 YkyB-like protein 13 150 2.1E-69 T 12-10-2018 IPR025552 YkyB-like protein BAMF_3500 b4bef2b00c405edf8eef07e05559a5f0 482 Pfam PF13091 PLD-like domain 323 449 6.8E-28 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BAMF_3500 b4bef2b00c405edf8eef07e05559a5f0 482 Pfam PF13091 PLD-like domain 134 277 2.9E-15 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BAMF_3500 b4bef2b00c405edf8eef07e05559a5f0 482 SMART SM00155 395 422 9.7E-7 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BAMF_3500 b4bef2b00c405edf8eef07e05559a5f0 482 SMART SM00155 217 244 6.1E-7 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BAMF_3500 b4bef2b00c405edf8eef07e05559a5f0 482 Pfam PF13396 Phospholipase_D-nuclease N-terminal 13 55 2.6E-12 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal BAMF_3500 b4bef2b00c405edf8eef07e05559a5f0 482 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 7 482 6.1E-195 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 BAMF_3500 b4bef2b00c405edf8eef07e05559a5f0 482 Hamap MF_01916 Cardiolipin synthase. 8 482 47.086 T 12-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 BAMF_3500 b4bef2b00c405edf8eef07e05559a5f0 482 SUPERFAMILY SSF56024 80 312 3.77E-58 T 12-10-2018 BAMF_3500 b4bef2b00c405edf8eef07e05559a5f0 482 Gene3D G3DSA:3.30.870.10 110 302 3.6E-47 T 12-10-2018 BAMF_3500 b4bef2b00c405edf8eef07e05559a5f0 482 PIRSF PIRSF000850 385 477 0.17 T 12-10-2018 BAMF_3500 b4bef2b00c405edf8eef07e05559a5f0 482 PIRSF PIRSF000850 107 278 0.11 T 12-10-2018 BAMF_3500 b4bef2b00c405edf8eef07e05559a5f0 482 PIRSF PIRSF000850 305 395 0.64 T 12-10-2018 BAMF_3500 b4bef2b00c405edf8eef07e05559a5f0 482 SUPERFAMILY SSF56024 269 468 2.47E-52 T 12-10-2018 BAMF_3500 b4bef2b00c405edf8eef07e05559a5f0 482 Gene3D G3DSA:3.30.870.10 311 457 1.1E-27 T 12-10-2018 BAMF_1796 47f419eaa7e086083c7d0284d7508007 235 Pfam PF05908 Poly-gamma-glutamate hydrolase 36 224 5.1E-71 T 12-10-2018 IPR008585 Poly-gamma-glutamate hydrolase BAMF_1796 47f419eaa7e086083c7d0284d7508007 235 Gene3D G3DSA:3.40.630.100 31 235 9.4E-61 T 12-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily BAMF_3409 24157499a3c7f9e1931f48271e5cfd44 517 Gene3D G3DSA:3.40.50.300 2 287 7.3E-47 T 12-10-2018 BAMF_3409 24157499a3c7f9e1931f48271e5cfd44 517 Pfam PF00005 ABC transporter 40 170 1.9E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3409 24157499a3c7f9e1931f48271e5cfd44 517 SUPERFAMILY SSF52540 24 233 6.37E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3409 24157499a3c7f9e1931f48271e5cfd44 517 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3409 24157499a3c7f9e1931f48271e5cfd44 517 SMART SM00382 48 236 1.1E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0431 510e86886bc4610ca2d79d3430747702 297 Gene3D G3DSA:1.20.1510.10 12 208 1.6E-53 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BAMF_0431 510e86886bc4610ca2d79d3430747702 297 SUPERFAMILY SSF161111 8 209 4.18E-53 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BAMF_0431 510e86886bc4610ca2d79d3430747702 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 288 3.7E-70 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BAMF_0431 510e86886bc4610ca2d79d3430747702 297 Pfam PF01545 Cation efflux family 16 207 4.7E-49 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BAMF_0431 510e86886bc4610ca2d79d3430747702 297 SUPERFAMILY SSF160240 214 287 1.1E-16 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BAMF_0431 510e86886bc4610ca2d79d3430747702 297 Gene3D G3DSA:3.30.70.1350 209 288 3.6E-15 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BAMF_0431 510e86886bc4610ca2d79d3430747702 297 Pfam PF16916 Dimerisation domain of Zinc Transporter 216 288 2.7E-17 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain BAMF_2677 2e36c8cdf1d1b9e57c1a5ddfda9a761f 499 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 291 490 9.1E-39 T 12-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 BAMF_2677 2e36c8cdf1d1b9e57c1a5ddfda9a761f 499 SUPERFAMILY SSF51445 17 381 5.86E-116 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_2677 2e36c8cdf1d1b9e57c1a5ddfda9a761f 499 Gene3D G3DSA:2.60.40.1180 7 494 6.2E-226 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta BAMF_2677 2e36c8cdf1d1b9e57c1a5ddfda9a761f 499 Gene3D G3DSA:3.20.20.80 18 381 6.2E-226 T 12-10-2018 BAMF_2677 2e36c8cdf1d1b9e57c1a5ddfda9a761f 499 SUPERFAMILY SSF51011 369 497 7.19E-42 T 12-10-2018 BAMF_2677 2e36c8cdf1d1b9e57c1a5ddfda9a761f 499 SMART SM00813 291 490 9.2E-87 T 12-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 BAMF_1592 4f73a0ea98d8e97db4b693c40aa55985 490 Pfam PF01225 Mur ligase family, catalytic domain 24 94 6.2E-14 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BAMF_1592 4f73a0ea98d8e97db4b693c40aa55985 490 Gene3D G3DSA:3.90.190.20 338 490 2.3E-59 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BAMF_1592 4f73a0ea98d8e97db4b693c40aa55985 490 Pfam PF08245 Mur ligase middle domain 107 313 3.6E-58 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BAMF_1592 4f73a0ea98d8e97db4b693c40aa55985 490 Gene3D G3DSA:3.40.1190.10 98 337 7.4E-93 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BAMF_1592 4f73a0ea98d8e97db4b693c40aa55985 490 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 417 6.2E-24 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BAMF_1592 4f73a0ea98d8e97db4b693c40aa55985 490 SUPERFAMILY SSF53623 98 332 2.75E-78 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BAMF_1592 4f73a0ea98d8e97db4b693c40aa55985 490 SUPERFAMILY SSF63418 15 98 3.14E-25 T 12-10-2018 IPR035911 MurE/MurF, N-terminal BAMF_1592 4f73a0ea98d8e97db4b693c40aa55985 490 SUPERFAMILY SSF53244 333 486 6.93E-47 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BAMF_1592 4f73a0ea98d8e97db4b693c40aa55985 490 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 484 36.885 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 BAMF_1592 4f73a0ea98d8e97db4b693c40aa55985 490 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 484 2.0E-182 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 BAMF_1592 4f73a0ea98d8e97db4b693c40aa55985 490 Gene3D G3DSA:3.40.1390.10 2 97 1.9E-28 T 12-10-2018 BAMF_1002 df9f613887ef03b7b99a351cfcc18bc7 125 Gene3D G3DSA:1.10.10.10 7 125 5.3E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1002 df9f613887ef03b7b99a351cfcc18bc7 125 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 5.9E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_1002 df9f613887ef03b7b99a351cfcc18bc7 125 SMART SM00345 15 74 2.1E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_1002 df9f613887ef03b7b99a351cfcc18bc7 125 SUPERFAMILY SSF46785 5 78 3.54E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3261 e83ea5a47c12d7516cb093cbe6dfba97 231 SUPERFAMILY SSF53850 91 210 1.86E-23 T 12-10-2018 BAMF_3261 e83ea5a47c12d7516cb093cbe6dfba97 231 SUPERFAMILY SSF46785 1 111 5.39E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3261 e83ea5a47c12d7516cb093cbe6dfba97 231 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3261 e83ea5a47c12d7516cb093cbe6dfba97 231 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3261 e83ea5a47c12d7516cb093cbe6dfba97 231 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3261 e83ea5a47c12d7516cb093cbe6dfba97 231 Gene3D G3DSA:3.40.190.10 160 211 7.3E-30 T 12-10-2018 BAMF_3261 e83ea5a47c12d7516cb093cbe6dfba97 231 Gene3D G3DSA:3.40.190.10 92 159 7.3E-30 T 12-10-2018 BAMF_3261 e83ea5a47c12d7516cb093cbe6dfba97 231 Pfam PF03466 LysR substrate binding domain 88 211 1.1E-23 T 12-10-2018 IPR005119 LysR, substrate-binding BAMF_3261 e83ea5a47c12d7516cb093cbe6dfba97 231 Gene3D G3DSA:1.10.10.10 1 84 5.7E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3261 e83ea5a47c12d7516cb093cbe6dfba97 231 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.0E-22 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_0152 9257481f30ad86ab37449afcfe7feb97 149 Pfam PF10730 Protein of unknown function (DUF2521) 3 149 1.2E-54 T 12-10-2018 IPR019667 Uncharacterised protein family YbaK BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 SUPERFAMILY SSF50447 619 716 4.2E-33 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 SUPERFAMILY SSF52540 212 391 1.83E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 Gene3D G3DSA:3.40.50.300 216 389 2.5E-74 T 12-10-2018 BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 221 377 5.5E-44 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 Gene3D G3DSA:1.10.10.2480 1 70 2.5E-15 T 12-10-2018 BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 Gene3D G3DSA:2.40.30.10 620 717 3.4E-33 T 12-10-2018 BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 SUPERFAMILY SSF52156 496 625 1.31E-40 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 716 17.541 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 134 716 1.5E-290 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 SUPERFAMILY SSF50447 390 473 6.86E-26 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 5.4E-13 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 144 192 3.1E-15 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 ProSitePatterns PS01176 Initiation factor 2 signature. 669 691 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 Gene3D G3DSA:3.40.50.10050 512 619 4.3E-40 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 Pfam PF11987 Translation-initiation factor 2 504 608 3.1E-38 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 Gene3D G3DSA:2.40.30.10 390 507 2.1E-42 T 12-10-2018 BAMF_1735 9efda247d7a96c4022a10db0d8f6192e 717 Pfam PF00009 Elongation factor Tu GTP binding domain 223 378 1.8E-35 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_3046 3467ac5f8ce968d9d3fcac69e03a5fb9 398 Gene3D G3DSA:1.20.1250.20 5 385 1.4E-76 T 12-10-2018 BAMF_3046 3467ac5f8ce968d9d3fcac69e03a5fb9 398 PRINTS PR01035 Tetracycline resistance protein signature 277 298 5.8E-25 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_3046 3467ac5f8ce968d9d3fcac69e03a5fb9 398 PRINTS PR01035 Tetracycline resistance protein signature 337 360 5.8E-25 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_3046 3467ac5f8ce968d9d3fcac69e03a5fb9 398 PRINTS PR01035 Tetracycline resistance protein signature 73 97 5.8E-25 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_3046 3467ac5f8ce968d9d3fcac69e03a5fb9 398 PRINTS PR01035 Tetracycline resistance protein signature 16 32 5.8E-25 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_3046 3467ac5f8ce968d9d3fcac69e03a5fb9 398 PRINTS PR01035 Tetracycline resistance protein signature 131 153 5.8E-25 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_3046 3467ac5f8ce968d9d3fcac69e03a5fb9 398 PRINTS PR01035 Tetracycline resistance protein signature 249 269 5.8E-25 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_3046 3467ac5f8ce968d9d3fcac69e03a5fb9 398 PRINTS PR01035 Tetracycline resistance protein signature 159 179 5.8E-25 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_3046 3467ac5f8ce968d9d3fcac69e03a5fb9 398 Pfam PF07690 Major Facilitator Superfamily 10 266 6.5E-49 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_3046 3467ac5f8ce968d9d3fcac69e03a5fb9 398 SUPERFAMILY SSF103473 8 393 5.62E-75 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_1141 85b34839f38032c9de778ea6a3787005 492 SUPERFAMILY SSF51905 3 346 2.97E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1141 85b34839f38032c9de778ea6a3787005 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.3E-40 T 12-10-2018 BAMF_1141 85b34839f38032c9de778ea6a3787005 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 322 1.3E-40 T 12-10-2018 BAMF_1141 85b34839f38032c9de778ea6a3787005 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 302 1.3E-40 T 12-10-2018 BAMF_1141 85b34839f38032c9de778ea6a3787005 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 1.3E-40 T 12-10-2018 BAMF_1141 85b34839f38032c9de778ea6a3787005 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 271 286 1.3E-40 T 12-10-2018 BAMF_1141 85b34839f38032c9de778ea6a3787005 492 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 322 338 1.3E-40 T 12-10-2018 BAMF_1141 85b34839f38032c9de778ea6a3787005 492 Gene3D G3DSA:3.40.30.120 380 490 1.5E-18 T 12-10-2018 BAMF_1141 85b34839f38032c9de778ea6a3787005 492 Gene3D G3DSA:3.30.70.2450 187 258 5.0E-19 T 12-10-2018 BAMF_1141 85b34839f38032c9de778ea6a3787005 492 Gene3D G3DSA:3.50.50.60 1 186 3.0E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1141 85b34839f38032c9de778ea6a3787005 492 Pfam PF01494 FAD binding domain 2 335 4.1E-92 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 BAMF_1141 85b34839f38032c9de778ea6a3787005 492 Gene3D G3DSA:3.50.50.60 259 374 3.2E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0012 8d281ea64c8621b6ba772af0f76025c1 196 Pfam PF01174 SNO glutamine amidotransferase family 6 188 3.5E-81 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BAMF_0012 8d281ea64c8621b6ba772af0f76025c1 196 SUPERFAMILY SSF52317 3 188 2.5E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_0012 8d281ea64c8621b6ba772af0f76025c1 196 ProSitePatterns PS01236 PdxT/SNO family family signature. 41 51 - T 12-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BAMF_0012 8d281ea64c8621b6ba772af0f76025c1 196 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 186 37.151 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BAMF_0012 8d281ea64c8621b6ba772af0f76025c1 196 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 4 185 4.2E-83 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BAMF_0012 8d281ea64c8621b6ba772af0f76025c1 196 PIRSF PIRSF005639 1 191 1.6E-73 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BAMF_0012 8d281ea64c8621b6ba772af0f76025c1 196 Gene3D G3DSA:3.40.50.880 1 196 9.7E-72 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_2118 5c9a3bd2e7b182e879d6c2cbb704e3ca 99 Hamap MF_02011 Cell cycle protein GpsB [gpsB]. 3 94 24.219 T 12-10-2018 IPR011229 Cell cycle protein GpsB BAMF_2118 5c9a3bd2e7b182e879d6c2cbb704e3ca 99 Pfam PF05103 DivIVA protein 8 68 2.2E-16 T 12-10-2018 IPR007793 DivIVA family BAMF_2118 5c9a3bd2e7b182e879d6c2cbb704e3ca 99 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 41 3.4E-14 T 12-10-2018 IPR019933 DivIVA domain BAMF_2118 5c9a3bd2e7b182e879d6c2cbb704e3ca 99 PIRSF PIRSF029938 1 98 3.9E-39 T 12-10-2018 IPR011229 Cell cycle protein GpsB BAMF_1929 2d189d90c79c9ac33ea24119bf68bbc6 259 SUPERFAMILY SSF52096 3 258 2.58E-85 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_1929 2d189d90c79c9ac33ea24119bf68bbc6 259 Gene3D G3DSA:3.90.226.10 4 200 6.0E-71 T 12-10-2018 BAMF_1929 2d189d90c79c9ac33ea24119bf68bbc6 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BAMF_1929 2d189d90c79c9ac33ea24119bf68bbc6 259 Gene3D G3DSA:1.10.12.10 201 259 1.7E-26 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal BAMF_1929 2d189d90c79c9ac33ea24119bf68bbc6 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 258 3.0E-67 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BAMF_2136 d53a6c270947049f1e9c4e4ef37b9fc6 430 Gene3D G3DSA:3.30.930.10 102 430 1.2E-117 T 12-10-2018 BAMF_2136 d53a6c270947049f1e9c4e4ef37b9fc6 430 Pfam PF00152 tRNA synthetases class II (D, K and N) 111 424 3.7E-85 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2136 d53a6c270947049f1e9c4e4ef37b9fc6 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 385 399 8.1E-15 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2136 d53a6c270947049f1e9c4e4ef37b9fc6 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 180 192 8.1E-15 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2136 d53a6c270947049f1e9c4e4ef37b9fc6 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 209 8.1E-15 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2136 d53a6c270947049f1e9c4e4ef37b9fc6 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 345 361 8.1E-15 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2136 d53a6c270947049f1e9c4e4ef37b9fc6 430 SUPERFAMILY SSF55681 110 424 1.78E-97 T 12-10-2018 BAMF_2136 d53a6c270947049f1e9c4e4ef37b9fc6 430 Gene3D G3DSA:2.40.50.140 2 101 4.1E-24 T 12-10-2018 BAMF_2136 d53a6c270947049f1e9c4e4ef37b9fc6 430 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 2 429 2.9E-174 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 BAMF_2136 d53a6c270947049f1e9c4e4ef37b9fc6 430 SUPERFAMILY SSF50249 9 102 9.43E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_2136 d53a6c270947049f1e9c4e4ef37b9fc6 430 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 1 430 42.182 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 BAMF_2136 d53a6c270947049f1e9c4e4ef37b9fc6 430 Pfam PF01336 OB-fold nucleic acid binding domain 16 95 6.7E-16 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BAMF_2699 92adf412f9d35d8cbf7f48bb27d086c4 276 Pfam PF08812 YtxC-like family 51 261 5.4E-53 T 12-10-2018 IPR014199 Sporulation protein YtxC BAMF_2699 92adf412f9d35d8cbf7f48bb27d086c4 276 TIGRFAM TIGR02834 spo_ytxC: putative sporulation protein YtxC 3 262 7.6E-77 T 12-10-2018 IPR014199 Sporulation protein YtxC BAMF_2699 92adf412f9d35d8cbf7f48bb27d086c4 276 PIRSF PIRSF012563 1 275 2.4E-94 T 12-10-2018 IPR014199 Sporulation protein YtxC BAMF_3282 41e2aae27826d5a3c1edc184d818db34 345 SUPERFAMILY SSF53448 4 228 4.5E-58 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3282 41e2aae27826d5a3c1edc184d818db34 345 Gene3D G3DSA:3.90.550.10 1 245 1.6E-58 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3282 41e2aae27826d5a3c1edc184d818db34 345 Pfam PF00535 Glycosyl transferase family 2 7 153 1.5E-38 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BAMF_2747 3aeb302677fad2bd484fcfd4821621d1 531 Gene3D G3DSA:2.30.40.10 8 502 3.4E-137 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_2747 3aeb302677fad2bd484fcfd4821621d1 531 Pfam PF07969 Amidohydrolase family 49 525 3.8E-127 T 12-10-2018 IPR013108 Amidohydrolase 3 BAMF_2747 3aeb302677fad2bd484fcfd4821621d1 531 Gene3D G3DSA:3.20.20.140 61 484 3.4E-137 T 12-10-2018 BAMF_2747 3aeb302677fad2bd484fcfd4821621d1 531 Gene3D G3DSA:3.10.310.70 79 195 3.4E-137 T 12-10-2018 BAMF_2747 3aeb302677fad2bd484fcfd4821621d1 531 SUPERFAMILY SSF51556 60 484 3.12E-28 T 12-10-2018 IPR032466 Metal-dependent hydrolase BAMF_2747 3aeb302677fad2bd484fcfd4821621d1 531 SUPERFAMILY SSF51338 3 526 3.12E-18 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_3625 2e90dcc0d9cfe84be04db4db4f9a911d 474 Gene3D G3DSA:3.40.50.2000 255 286 3.5E-6 T 12-10-2018 BAMF_3625 2e90dcc0d9cfe84be04db4db4f9a911d 474 SUPERFAMILY SSF53756 191 443 6.57E-20 T 12-10-2018 BAMF_3625 2e90dcc0d9cfe84be04db4db4f9a911d 474 Pfam PF05159 Capsule polysaccharide biosynthesis protein 307 392 1.4E-7 T 12-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 BAMF_3625 2e90dcc0d9cfe84be04db4db4f9a911d 474 Gene3D G3DSA:3.40.50.2000 287 442 3.5E-6 T 12-10-2018 BAMF_1535 6baaab4a6d7afd1300169b35481e2757 442 SUPERFAMILY SSF51230 3 88 2.75E-25 T 12-10-2018 IPR011053 Single hybrid motif BAMF_1535 6baaab4a6d7afd1300169b35481e2757 442 Gene3D G3DSA:3.30.559.10 192 439 3.1E-90 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_1535 6baaab4a6d7afd1300169b35481e2757 442 Gene3D G3DSA:2.40.50.100 2 81 1.1E-25 T 12-10-2018 BAMF_1535 6baaab4a6d7afd1300169b35481e2757 442 SUPERFAMILY SSF52777 201 440 4.45E-88 T 12-10-2018 BAMF_1535 6baaab4a6d7afd1300169b35481e2757 442 Pfam PF00364 Biotin-requiring enzyme 4 75 1.6E-22 T 12-10-2018 IPR000089 Biotin/lipoyl attachment BAMF_1535 6baaab4a6d7afd1300169b35481e2757 442 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 212 440 1.5E-88 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BAMF_1535 6baaab4a6d7afd1300169b35481e2757 442 Gene3D G3DSA:4.10.320.10 129 182 1.1E-22 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BAMF_1535 6baaab4a6d7afd1300169b35481e2757 442 SUPERFAMILY SSF47005 134 180 1.57E-13 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BAMF_1535 6baaab4a6d7afd1300169b35481e2757 442 Pfam PF02817 e3 binding domain 140 174 7.2E-15 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BAMF_1535 6baaab4a6d7afd1300169b35481e2757 442 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BAMF_2602 f154704ec8a72c49fe783e0ea090f01c 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 9.6E-42 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2602 f154704ec8a72c49fe783e0ea090f01c 102 SUPERFAMILY SSF141091 1 101 2.62E-38 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2602 f154704ec8a72c49fe783e0ea090f01c 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2602 f154704ec8a72c49fe783e0ea090f01c 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 2.1E-40 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2602 f154704ec8a72c49fe783e0ea090f01c 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 26.814 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1413 29568177f4bf696d6fd0dc0d1fbb8c28 420 SMART SM00636 101 403 8.8E-27 T 12-10-2018 IPR011583 Chitinase II GO:0008061 BAMF_1413 29568177f4bf696d6fd0dc0d1fbb8c28 420 Gene3D G3DSA:3.10.350.10 2 46 8.2E-15 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1413 29568177f4bf696d6fd0dc0d1fbb8c28 420 Pfam PF01476 LysM domain 50 93 7.1E-9 T 12-10-2018 IPR018392 LysM domain BAMF_1413 29568177f4bf696d6fd0dc0d1fbb8c28 420 Pfam PF01476 LysM domain 4 46 2.1E-12 T 12-10-2018 IPR018392 LysM domain BAMF_1413 29568177f4bf696d6fd0dc0d1fbb8c28 420 Gene3D G3DSA:3.20.20.80 129 400 1.8E-108 T 12-10-2018 BAMF_1413 29568177f4bf696d6fd0dc0d1fbb8c28 420 SUPERFAMILY SSF54106 49 93 9.02E-8 T 12-10-2018 BAMF_1413 29568177f4bf696d6fd0dc0d1fbb8c28 420 Gene3D G3DSA:3.10.350.10 48 93 3.0E-12 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1413 29568177f4bf696d6fd0dc0d1fbb8c28 420 SUPERFAMILY SSF51445 120 417 1.29E-44 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_1413 29568177f4bf696d6fd0dc0d1fbb8c28 420 Gene3D G3DSA:3.10.50.10 318 374 1.8E-108 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily BAMF_1413 29568177f4bf696d6fd0dc0d1fbb8c28 420 SMART SM00257 49 93 1.1E-11 T 12-10-2018 IPR018392 LysM domain BAMF_1413 29568177f4bf696d6fd0dc0d1fbb8c28 420 SMART SM00257 3 46 1.5E-13 T 12-10-2018 IPR018392 LysM domain BAMF_1413 29568177f4bf696d6fd0dc0d1fbb8c28 420 Pfam PF00704 Glycosyl hydrolases family 18 179 400 1.8E-26 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 BAMF_1413 29568177f4bf696d6fd0dc0d1fbb8c28 420 SUPERFAMILY SSF54106 2 46 1.83E-11 T 12-10-2018 BAMF_3426 17bd85f27461cd2afebfc0f30e1f239b 411 Pfam PF00877 NlpC/P60 family 179 284 9.0E-30 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BAMF_3426 17bd85f27461cd2afebfc0f30e1f239b 411 Pfam PF00877 NlpC/P60 family 47 154 3.4E-21 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BAMF_3426 17bd85f27461cd2afebfc0f30e1f239b 411 Pfam PF00877 NlpC/P60 family 307 408 1.7E-20 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BAMF_3426 17bd85f27461cd2afebfc0f30e1f239b 411 SUPERFAMILY SSF54001 164 286 9.48E-38 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BAMF_3426 17bd85f27461cd2afebfc0f30e1f239b 411 SUPERFAMILY SSF54001 295 410 1.18E-29 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BAMF_3426 17bd85f27461cd2afebfc0f30e1f239b 411 Gene3D G3DSA:3.90.1720.10 288 411 6.3E-34 T 12-10-2018 BAMF_3426 17bd85f27461cd2afebfc0f30e1f239b 411 Gene3D G3DSA:3.90.1720.10 161 287 1.0E-41 T 12-10-2018 BAMF_3426 17bd85f27461cd2afebfc0f30e1f239b 411 Gene3D G3DSA:3.90.1720.10 25 160 2.6E-34 T 12-10-2018 BAMF_3426 17bd85f27461cd2afebfc0f30e1f239b 411 SUPERFAMILY SSF54001 34 158 1.83E-30 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BAMF_1143 eed55a7164eb7e206ea135669d6b21a9 385 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 206 365 4.2E-35 T 12-10-2018 IPR017516 AbrB duplication BAMF_1143 eed55a7164eb7e206ea135669d6b21a9 385 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 11 172 2.6E-37 T 12-10-2018 IPR017516 AbrB duplication BAMF_1143 eed55a7164eb7e206ea135669d6b21a9 385 PIRSF PIRSF038991 1 374 7.0E-99 T 12-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 BAMF_1143 eed55a7164eb7e206ea135669d6b21a9 385 Pfam PF05145 Transition state regulatory protein AbrB 33 365 5.1E-83 T 12-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 BAMF_1422 2f12646aec7ee6a225d2493fca682df6 293 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 1 255 32.796 T 12-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type BAMF_1422 2f12646aec7ee6a225d2493fca682df6 293 Gene3D G3DSA:2.40.290.10 2 174 4.2E-19 T 12-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily BAMF_1422 2f12646aec7ee6a225d2493fca682df6 293 SUPERFAMILY SSF100939 2 260 5.69E-54 T 12-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily BAMF_1422 2f12646aec7ee6a225d2493fca682df6 293 Pfam PF02735 Ku70/Ku80 beta-barrel domain 11 189 6.6E-41 T 12-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 BAMF_1422 2f12646aec7ee6a225d2493fca682df6 293 TIGRFAM TIGR02772 Ku_bact: Ku protein 1 257 5.7E-98 T 12-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type BAMF_1422 2f12646aec7ee6a225d2493fca682df6 293 SMART SM00559 52 181 1.6E-48 T 12-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 BAMF_1422 2f12646aec7ee6a225d2493fca682df6 293 PIRSF PIRSF006493 1 291 8.7E-109 T 12-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type BAMF_2938 bff4dff613c9b90ccfaa9e63bbc4058f 78 Pfam PF04070 Domain of unknown function (DUF378) 3 61 5.0E-27 T 12-10-2018 IPR007211 Protein of unknown function DUF378 BAMF_0445 8ea7f4ef0b3f2c6d9ab48d70afad1e91 121 SUPERFAMILY SSF52091 5 115 4.32E-20 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_0445 8ea7f4ef0b3f2c6d9ab48d70afad1e91 121 Pfam PF01740 STAS domain 12 101 1.0E-12 T 12-10-2018 IPR002645 STAS domain BAMF_0445 8ea7f4ef0b3f2c6d9ab48d70afad1e91 121 Gene3D G3DSA:3.30.750.24 3 119 8.0E-34 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_1058 8f4e08df10d3d4034a476399ed364c51 247 Pfam PF02146 Sir2 family 19 198 1.1E-51 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 BAMF_1058 8f4e08df10d3d4034a476399ed364c51 247 Gene3D G3DSA:3.40.50.1220 10 242 6.1E-69 T 12-10-2018 BAMF_1058 8f4e08df10d3d4034a476399ed364c51 247 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 3 244 57.682 T 12-10-2018 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 BAMF_1058 8f4e08df10d3d4034a476399ed364c51 247 SUPERFAMILY SSF52467 2 244 1.74E-72 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BAMF_1058 8f4e08df10d3d4034a476399ed364c51 247 Gene3D G3DSA:3.30.1600.10 28 170 6.1E-69 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily BAMF_0123 f3527853780abeced6befc2565a4e57a 144 SUPERFAMILY SSF54686 1 137 1.7E-59 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 BAMF_0123 f3527853780abeced6befc2565a4e57a 144 Gene3D G3DSA:3.90.1170.10 1 143 6.8E-56 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 BAMF_0123 f3527853780abeced6befc2565a4e57a 144 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 41.632 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0123 f3527853780abeced6befc2565a4e57a 144 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.6E-53 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 BAMF_0123 f3527853780abeced6befc2565a4e57a 144 PRINTS PR00060 Ribosomal protein L16 signature 24 36 8.4E-41 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0123 f3527853780abeced6befc2565a4e57a 144 PRINTS PR00060 Ribosomal protein L16 signature 58 87 8.4E-41 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0123 f3527853780abeced6befc2565a4e57a 144 PRINTS PR00060 Ribosomal protein L16 signature 42 53 8.4E-41 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0123 f3527853780abeced6befc2565a4e57a 144 PRINTS PR00060 Ribosomal protein L16 signature 88 117 8.4E-41 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0123 f3527853780abeced6befc2565a4e57a 144 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0123 f3527853780abeced6befc2565a4e57a 144 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 5.8E-64 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0123 f3527853780abeced6befc2565a4e57a 144 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2460 6538c7a6e9163c225fb2409832740354 118 SUPERFAMILY SSF81301 2 113 4.58E-41 T 12-10-2018 BAMF_2460 6538c7a6e9163c225fb2409832740354 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 105 25.754 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BAMF_2460 6538c7a6e9163c225fb2409832740354 118 Gene3D G3DSA:3.30.460.10 1 108 2.3E-40 T 12-10-2018 BAMF_2460 6538c7a6e9163c225fb2409832740354 118 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 6.1E-28 T 12-10-2018 BAMF_2460 6538c7a6e9163c225fb2409832740354 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 1.4E-37 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BAMF_1684 8e7d26e946575f8e808f9517f10bcc3e 435 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 4 435 8.4E-250 T 12-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 BAMF_1684 8e7d26e946575f8e808f9517f10bcc3e 435 SUPERFAMILY SSF51905 4 367 4.07E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1684 8e7d26e946575f8e808f9517f10bcc3e 435 Gene3D G3DSA:3.50.50.60 3 178 1.9E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1684 8e7d26e946575f8e808f9517f10bcc3e 435 Gene3D G3DSA:3.50.50.60 291 435 4.1E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1684 8e7d26e946575f8e808f9517f10bcc3e 435 Pfam PF01134 Glucose inhibited division protein A 6 367 3.4E-118 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 BAMF_1684 8e7d26e946575f8e808f9517f10bcc3e 435 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 337 360 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BAMF_1684 8e7d26e946575f8e808f9517f10bcc3e 435 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 6 434 36.916 T 12-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 BAMF_2214 7b23fa1ac56fd4b5983c68e270c8ffe7 179 Gene3D G3DSA:3.40.30.10 38 178 2.3E-47 T 12-10-2018 BAMF_2214 7b23fa1ac56fd4b5983c68e270c8ffe7 179 ProSitePatterns PS00194 Thioredoxin family active site. 67 85 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BAMF_2214 7b23fa1ac56fd4b5983c68e270c8ffe7 179 SUPERFAMILY SSF52833 39 172 1.8E-43 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_2214 7b23fa1ac56fd4b5983c68e270c8ffe7 179 Pfam PF00578 AhpC/TSA family 40 155 1.1E-35 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BAMF_2656 70ac38c9631827913420f2f168d22439 496 SUPERFAMILY SSF51011 357 491 3.96E-30 T 12-10-2018 BAMF_2656 70ac38c9631827913420f2f168d22439 496 SUPERFAMILY SSF51445 17 375 3.71E-98 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_2656 70ac38c9631827913420f2f168d22439 496 Gene3D G3DSA:2.60.40.1180 15 488 1.2E-194 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta BAMF_2656 70ac38c9631827913420f2f168d22439 496 SMART SM00813 294 485 7.7E-80 T 12-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 BAMF_2656 70ac38c9631827913420f2f168d22439 496 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 294 484 8.1E-43 T 12-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 BAMF_2656 70ac38c9631827913420f2f168d22439 496 Gene3D G3DSA:3.20.20.80 18 376 1.2E-194 T 12-10-2018 BAMF_3153 dad8a7ede9db73ab849f91fb8d3ed40f 225 Pfam PF04012 PspA/IM30 family 1 215 1.3E-58 T 12-10-2018 IPR007157 PspA/IM30 BAMF_2025 0aa390530d3bd1a8a2af563b205690a6 110 Gene3D G3DSA:1.10.10.10 1 107 2.1E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2025 0aa390530d3bd1a8a2af563b205690a6 110 Pfam PF01638 HxlR-like helix-turn-helix 11 99 5.2E-36 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type BAMF_2025 0aa390530d3bd1a8a2af563b205690a6 110 SUPERFAMILY SSF46785 5 98 1.21E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3801 8a7eaf454d85fba42315ee1c5f7d8370 103 Gene3D G3DSA:1.10.10.10 2 103 4.6E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3801 8a7eaf454d85fba42315ee1c5f7d8370 103 SMART SM00418 5 101 0.0022 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_3801 8a7eaf454d85fba42315ee1c5f7d8370 103 SUPERFAMILY SSF46785 4 100 2.61E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1381 1398a99a2fa2a5fac60f698145a88c56 308 SUPERFAMILY SSF161098 90 286 4.91E-19 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1381 1398a99a2fa2a5fac60f698145a88c56 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 2.0E-38 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_1381 1398a99a2fa2a5fac60f698145a88c56 308 Gene3D G3DSA:1.10.3720.10 83 300 7.9E-22 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3513 f879bd904c70fc7f54bb1e7f6c3fb122 436 SUPERFAMILY SSF55205 2 417 8.37E-141 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BAMF_3513 f879bd904c70fc7f54bb1e7f6c3fb122 436 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 3.5E-122 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 BAMF_3513 f879bd904c70fc7f54bb1e7f6c3fb122 436 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 416 2.6E-181 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_3513 f879bd904c70fc7f54bb1e7f6c3fb122 436 Gene3D G3DSA:3.65.10.10 6 415 2.3E-173 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BAMF_3513 f879bd904c70fc7f54bb1e7f6c3fb122 436 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 45.496 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_3513 f879bd904c70fc7f54bb1e7f6c3fb122 436 Gene3D G3DSA:3.65.10.10 20 231 2.3E-173 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BAMF_3017 4c4e9020e897c285348add28f3727111 98 SUPERFAMILY SSF55729 4 98 1.06E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_3017 4c4e9020e897c285348add28f3727111 98 Gene3D G3DSA:3.40.630.30 2 98 2.3E-13 T 12-10-2018 BAMF_2695 ba2e78bc016aa11627b189aa7bcfc286 244 Pfam PF04397 LytTr DNA-binding domain 146 241 3.3E-29 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BAMF_2695 ba2e78bc016aa11627b189aa7bcfc286 244 SMART SM00448 2 113 1.8E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2695 ba2e78bc016aa11627b189aa7bcfc286 244 SUPERFAMILY SSF52172 1 126 1.99E-28 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_2695 ba2e78bc016aa11627b189aa7bcfc286 244 Gene3D G3DSA:2.20.25.10 206 243 2.2E-9 T 12-10-2018 BAMF_2695 ba2e78bc016aa11627b189aa7bcfc286 244 SMART SM00850 145 242 4.1E-36 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BAMF_2695 ba2e78bc016aa11627b189aa7bcfc286 244 Pfam PF00072 Response regulator receiver domain 4 113 9.8E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2695 ba2e78bc016aa11627b189aa7bcfc286 244 Gene3D G3DSA:3.40.50.2300 1 130 2.1E-30 T 12-10-2018 BAMF_2695 ba2e78bc016aa11627b189aa7bcfc286 244 Gene3D G3DSA:2.40.50.40 135 205 2.4E-12 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 SUPERFAMILY SSF56784 500 801 7.61E-59 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 SUPERFAMILY SSF81665 259 768 2.09E-11 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 ProSitePatterns PS01047 Heavy-metal-associated domain. 14 43 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 SUPERFAMILY SSF81653 304 400 4.97E-29 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 214 804 1.3E-182 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 ProSitePatterns PS01047 Heavy-metal-associated domain. 82 111 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 Pfam PF00403 Heavy-metal-associated domain 11 72 4.5E-14 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 Pfam PF00403 Heavy-metal-associated domain 80 139 4.1E-15 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 648 658 2.1E-27 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 724 736 2.1E-27 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 350 364 2.1E-27 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 637 2.1E-27 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 701 720 2.1E-27 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 502 516 2.1E-27 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 Gene3D G3DSA:3.40.50.1000 483 753 1.7E-92 T 12-10-2018 IPR023214 HAD superfamily BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 Gene3D G3DSA:2.70.150.20 293 405 1.9E-41 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 273 785 8.9E-90 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 504 510 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 SUPERFAMILY SSF55008 76 145 3.14E-20 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 SUPERFAMILY SSF55008 5 75 1.44E-18 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 77 141 5.9E-12 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 10 73 7.1E-11 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 Pfam PF00122 E1-E2 ATPase 300 481 2.2E-57 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 Gene3D G3DSA:3.30.70.100 76 150 3.4E-22 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 Pfam PF00702 haloacid dehalogenase-like hydrolase 499 715 1.3E-47 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 PRINTS PR00942 Copper-transporting ATPase 1 signature 9 34 2.5E-19 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 PRINTS PR00942 Copper-transporting ATPase 1 signature 35 58 2.5E-19 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 PRINTS PR00942 Copper-transporting ATPase 1 signature 196 216 2.5E-19 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 PRINTS PR00942 Copper-transporting ATPase 1 signature 216 241 2.5E-19 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 233 803 8.6E-201 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 Gene3D G3DSA:3.30.70.100 3 75 4.5E-20 T 12-10-2018 BAMF_3198 88ef2b46918cd1b638585ebe7ef4bfb9 812 Gene3D G3DSA:3.40.1110.10 513 633 1.7E-92 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BAMF_3601 ed0367f176241e3ccfa50fae01acd82a 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 254 4.0E-41 T 12-10-2018 BAMF_3601 ed0367f176241e3ccfa50fae01acd82a 259 Gene3D G3DSA:3.40.50.720 2 259 3.8E-70 T 12-10-2018 BAMF_3601 ed0367f176241e3ccfa50fae01acd82a 259 SUPERFAMILY SSF51735 3 255 1.61E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3601 ed0367f176241e3ccfa50fae01acd82a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.4E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3601 ed0367f176241e3ccfa50fae01acd82a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.4E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3601 ed0367f176241e3ccfa50fae01acd82a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.4E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3601 ed0367f176241e3ccfa50fae01acd82a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.4E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3601 ed0367f176241e3ccfa50fae01acd82a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.4E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3601 ed0367f176241e3ccfa50fae01acd82a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.4E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3519 5a61b77c294015ddf60eaf8b4e804b6c 287 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 9.6E-42 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3519 5a61b77c294015ddf60eaf8b4e804b6c 287 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 9.6E-42 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3519 5a61b77c294015ddf60eaf8b4e804b6c 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 9.6E-42 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3519 5a61b77c294015ddf60eaf8b4e804b6c 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 9.6E-42 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3519 5a61b77c294015ddf60eaf8b4e804b6c 287 Gene3D G3DSA:1.10.287.80 6 282 1.8E-103 T 12-10-2018 BAMF_3519 5a61b77c294015ddf60eaf8b4e804b6c 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 2 286 9.7E-115 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3519 5a61b77c294015ddf60eaf8b4e804b6c 287 Pfam PF00231 ATP synthase 3 286 1.4E-100 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3519 5a61b77c294015ddf60eaf8b4e804b6c 287 Gene3D G3DSA:3.40.1380.10 61 205 1.8E-103 T 12-10-2018 BAMF_3519 5a61b77c294015ddf60eaf8b4e804b6c 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3519 5a61b77c294015ddf60eaf8b4e804b6c 287 SUPERFAMILY SSF52943 2 286 1.31E-92 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3519 5a61b77c294015ddf60eaf8b4e804b6c 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 36.087 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_0173 acd3bbfe89fef0f5d6f05f5881723fa4 309 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 189 206 - T 12-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 BAMF_0173 acd3bbfe89fef0f5d6f05f5881723fa4 309 Pfam PF01380 SIS domain 133 200 3.2E-11 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BAMF_0173 acd3bbfe89fef0f5d6f05f5881723fa4 309 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 6 299 40.929 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 BAMF_0173 acd3bbfe89fef0f5d6f05f5881723fa4 309 Gene3D G3DSA:1.10.8.1080 223 301 8.5E-28 T 12-10-2018 BAMF_0173 acd3bbfe89fef0f5d6f05f5881723fa4 309 Gene3D G3DSA:3.40.50.10490 3 222 3.2E-77 T 12-10-2018 BAMF_0173 acd3bbfe89fef0f5d6f05f5881723fa4 309 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 10 300 7.1E-134 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 BAMF_0173 acd3bbfe89fef0f5d6f05f5881723fa4 309 SUPERFAMILY SSF53697 10 252 3.03E-67 T 12-10-2018 BAMF_2619 92c0f39ed25431c4aa43d31e56fdaca2 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 427 104.251 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BAMF_2619 92c0f39ed25431c4aa43d31e56fdaca2 429 SUPERFAMILY SSF53383 3 425 1.53E-130 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_2619 92c0f39ed25431c4aa43d31e56fdaca2 429 Pfam PF00202 Aminotransferase class-III 34 398 1.5E-74 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_2619 92c0f39ed25431c4aa43d31e56fdaca2 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 3.3E-203 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BAMF_2619 92c0f39ed25431c4aa43d31e56fdaca2 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_2619 92c0f39ed25431c4aa43d31e56fdaca2 429 Gene3D G3DSA:3.90.1150.10 10 421 1.2E-184 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_2619 92c0f39ed25431c4aa43d31e56fdaca2 429 Gene3D G3DSA:3.40.640.10 72 319 1.2E-184 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_2363 cf58fffb22c93b0d777dd7a77debe777 57 SUPERFAMILY SSF47406 10 38 9.81E-13 T 12-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 BAMF_2363 cf58fffb22c93b0d777dd7a77debe777 57 Pfam PF08671 Anti-repressor SinI 11 36 1.1E-11 T 12-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 BAMF_2363 cf58fffb22c93b0d777dd7a77debe777 57 Gene3D G3DSA:1.10.1660.10 2 55 2.3E-5 T 12-10-2018 BAMF_1893 2b2e4977fc43567ce8a208481c17c83a 95 SUPERFAMILY SSF89360 1 86 1.1E-10 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BAMF_1893 2b2e4977fc43567ce8a208481c17c83a 95 PIRSF PIRSF034852 1 95 8.2E-41 T 12-10-2018 IPR008326 Uncharacterised conserved protein UCP034852 BAMF_1774 83c31f82c8170b803a99b8b593d26a5f 143 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 9 113 1.3E-20 T 12-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA BAMF_1774 83c31f82c8170b803a99b8b593d26a5f 143 SUPERFAMILY SSF158622 4 123 3.4E-33 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily BAMF_1774 83c31f82c8170b803a99b8b593d26a5f 143 PIRSF PIRSF021287 1 123 5.2E-52 T 12-10-2018 IPR016783 Biofilm formation YmcA BAMF_1774 83c31f82c8170b803a99b8b593d26a5f 143 Gene3D G3DSA:1.20.1500.10 1 124 8.2E-35 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily BAMF_3053 52eb5e087d03a7d59c20d4474d8c340a 294 SUPERFAMILY SSF161098 25 294 1.05E-72 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3053 52eb5e087d03a7d59c20d4474d8c340a 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 287 9.0E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_3053 52eb5e087d03a7d59c20d4474d8c340a 294 Gene3D G3DSA:1.10.3720.10 19 281 1.5E-62 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2762 12c46c60ee738ac1284529d8397609c6 290 Gene3D G3DSA:1.20.1510.10 5 202 2.8E-63 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BAMF_2762 12c46c60ee738ac1284529d8397609c6 290 Pfam PF16916 Dimerisation domain of Zinc Transporter 207 285 5.6E-21 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain BAMF_2762 12c46c60ee738ac1284529d8397609c6 290 Gene3D G3DSA:3.30.70.1350 203 290 1.1E-27 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BAMF_2762 12c46c60ee738ac1284529d8397609c6 290 Pfam PF01545 Cation efflux family 10 202 1.9E-51 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BAMF_2762 12c46c60ee738ac1284529d8397609c6 290 SUPERFAMILY SSF160240 207 285 1.01E-19 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BAMF_2762 12c46c60ee738ac1284529d8397609c6 290 SUPERFAMILY SSF161111 5 204 3.4E-58 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BAMF_2762 12c46c60ee738ac1284529d8397609c6 290 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 6 286 8.5E-73 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BAMF_0674 6586fc0e10c6dfb26cf975cf26e7f15c 157 SUPERFAMILY SSF160424 4 156 4.71E-50 T 12-10-2018 IPR036170 Probable antitoxin YezG superfamily BAMF_0674 6586fc0e10c6dfb26cf975cf26e7f15c 157 Gene3D G3DSA:3.30.500.20 1 118 2.8E-41 T 12-10-2018 BAMF_0674 6586fc0e10c6dfb26cf975cf26e7f15c 157 Pfam PF04634 Protein of unknown function, DUF600 6 151 1.0E-53 T 12-10-2018 IPR006728 Protein of unknown function DUF600 BAMF_0674 6586fc0e10c6dfb26cf975cf26e7f15c 157 TIGRFAM TIGR01741 staph_tand_hypo: conserved hypothetical protein 1 154 2.5E-50 T 12-10-2018 IPR006728 Protein of unknown function DUF600 BAMF_0303 466313959f8ca2bed58a1dc876e8cc55 385 Gene3D G3DSA:3.90.180.10 11 373 2.5E-126 T 12-10-2018 BAMF_0303 466313959f8ca2bed58a1dc876e8cc55 385 Pfam PF00107 Zinc-binding dehydrogenase 197 264 5.0E-11 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BAMF_0303 466313959f8ca2bed58a1dc876e8cc55 385 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 145 4.9E-30 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BAMF_0303 466313959f8ca2bed58a1dc876e8cc55 385 Gene3D G3DSA:3.40.50.720 177 345 2.5E-126 T 12-10-2018 BAMF_0303 466313959f8ca2bed58a1dc876e8cc55 385 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 65 79 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BAMF_0303 466313959f8ca2bed58a1dc876e8cc55 385 Pfam PF13823 Alcohol dehydrogenase GroES-associated 9 30 1.1E-8 T 12-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated BAMF_0303 466313959f8ca2bed58a1dc876e8cc55 385 SUPERFAMILY SSF51735 164 346 6.5E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0303 466313959f8ca2bed58a1dc876e8cc55 385 SUPERFAMILY SSF50129 8 185 1.12E-59 T 12-10-2018 IPR011032 GroES-like superfamily BAMF_3274 ebe00c261cf355ec9a15f3b00b0cb605 72 SUPERFAMILY SSF158388 3 69 1.24E-33 T 12-10-2018 IPR037247 YvfG domain superfamily BAMF_3274 ebe00c261cf355ec9a15f3b00b0cb605 72 Pfam PF09628 YvfG protein 3 69 9.9E-38 T 12-10-2018 IPR018590 Uncharacterised domain YvfG BAMF_3819 f5fddf0e387d82589f89d2778e2efb49 159 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 14 153 1.3E-63 T 12-10-2018 IPR014203 Sporulation stage V, protein AC BAMF_3819 f5fddf0e387d82589f89d2778e2efb49 159 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 32 149 1.0E-39 T 12-10-2018 IPR005562 SpoVA BAMF_1840 f5fddf0e387d82589f89d2778e2efb49 159 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 14 153 1.3E-63 T 12-10-2018 IPR014203 Sporulation stage V, protein AC BAMF_1840 f5fddf0e387d82589f89d2778e2efb49 159 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 32 149 1.0E-39 T 12-10-2018 IPR005562 SpoVA BAMF_1964 f5fddf0e387d82589f89d2778e2efb49 159 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 14 153 1.3E-63 T 12-10-2018 IPR014203 Sporulation stage V, protein AC BAMF_1964 f5fddf0e387d82589f89d2778e2efb49 159 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 32 149 1.0E-39 T 12-10-2018 IPR005562 SpoVA BAMF_2576 0c9319fd9f56174332d08d7478ce4050 98 Pfam PF13797 Post-transcriptional regulator 7 87 1.2E-32 T 12-10-2018 IPR025716 Post-transcriptional regulator BAMF_3790 bea0f55b3b5631f82406441909aadade 310 PRINTS PR00069 Aldo-keto reductase signature 44 68 1.7E-13 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_3790 bea0f55b3b5631f82406441909aadade 310 PRINTS PR00069 Aldo-keto reductase signature 140 157 1.7E-13 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_3790 bea0f55b3b5631f82406441909aadade 310 PRINTS PR00069 Aldo-keto reductase signature 109 127 1.7E-13 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_3790 bea0f55b3b5631f82406441909aadade 310 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 140 157 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BAMF_3790 bea0f55b3b5631f82406441909aadade 310 SUPERFAMILY SSF51430 1 309 3.14E-96 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_3790 bea0f55b3b5631f82406441909aadade 310 Pfam PF00248 Aldo/keto reductase family 15 308 6.0E-75 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain BAMF_3790 bea0f55b3b5631f82406441909aadade 310 Gene3D G3DSA:3.20.20.100 2 310 1.3E-127 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_2734 c4931dfbc1d56003bd09ebc96cafee19 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.0E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2734 c4931dfbc1d56003bd09ebc96cafee19 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.0E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2734 c4931dfbc1d56003bd09ebc96cafee19 255 Gene3D G3DSA:3.40.50.720 1 254 5.2E-66 T 12-10-2018 BAMF_2734 c4931dfbc1d56003bd09ebc96cafee19 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 247 1.3E-46 T 12-10-2018 BAMF_2734 c4931dfbc1d56003bd09ebc96cafee19 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.5E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2734 c4931dfbc1d56003bd09ebc96cafee19 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.5E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2734 c4931dfbc1d56003bd09ebc96cafee19 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.5E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2734 c4931dfbc1d56003bd09ebc96cafee19 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.5E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2734 c4931dfbc1d56003bd09ebc96cafee19 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.5E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2734 c4931dfbc1d56003bd09ebc96cafee19 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.5E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2734 c4931dfbc1d56003bd09ebc96cafee19 255 SUPERFAMILY SSF51735 2 248 7.02E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3894 8aeb12a6180bd6d9099011ffdac3d799 305 Gene3D G3DSA:3.40.30.10 5 173 2.0E-72 T 12-10-2018 BAMF_3894 8aeb12a6180bd6d9099011ffdac3d799 305 SUPERFAMILY SSF52833 6 134 1.66E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_3894 8aeb12a6180bd6d9099011ffdac3d799 305 Pfam PF03190 Protein of unknown function, DUF255 8 168 3.2E-77 T 12-10-2018 IPR004879 Domain of unknown function DUF255 BAMF_3894 8aeb12a6180bd6d9099011ffdac3d799 305 SUPERFAMILY SSF48208 190 288 1.79E-31 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BAMF_0706 3a21d551adc878246c3a6b92fc6546e4 299 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 61 296 1.6E-52 T 12-10-2018 BAMF_0706 3a21d551adc878246c3a6b92fc6546e4 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 191 1.6E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0706 3a21d551adc878246c3a6b92fc6546e4 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 239 1.6E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0706 3a21d551adc878246c3a6b92fc6546e4 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 260 280 1.6E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0706 3a21d551adc878246c3a6b92fc6546e4 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 53 70 1.6E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0706 3a21d551adc878246c3a6b92fc6546e4 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 140 1.6E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0706 3a21d551adc878246c3a6b92fc6546e4 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 220 1.6E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0706 3a21d551adc878246c3a6b92fc6546e4 299 SUPERFAMILY SSF51735 50 296 1.75E-71 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0706 3a21d551adc878246c3a6b92fc6546e4 299 Gene3D G3DSA:3.40.50.720 4 296 7.5E-87 T 12-10-2018 BAMF_0706 3a21d551adc878246c3a6b92fc6546e4 299 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 188 216 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_3322 27c6a0127e36b5ed13972271aad8b9bb 316 Gene3D G3DSA:1.10.10.10 215 309 5.0E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3322 27c6a0127e36b5ed13972271aad8b9bb 316 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 18 103 5.8E-37 T 12-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain BAMF_3322 27c6a0127e36b5ed13972271aad8b9bb 316 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 305 1.9E-131 T 12-10-2018 IPR033981 Sporulation regulator WhiA-like BAMF_3322 27c6a0127e36b5ed13972271aad8b9bb 316 Pfam PF02650 WhiA C-terminal HTH domain 220 304 1.9E-35 T 12-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal BAMF_3322 27c6a0127e36b5ed13972271aad8b9bb 316 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 307 35.544 T 12-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 BAMF_3322 27c6a0127e36b5ed13972271aad8b9bb 316 SUPERFAMILY SSF55608 119 221 3.51E-19 T 12-10-2018 IPR027434 Homing endonuclease BAMF_3322 27c6a0127e36b5ed13972271aad8b9bb 316 Pfam PF14527 WhiA LAGLIDADG-like domain 125 217 1.6E-36 T 12-10-2018 IPR039518 WhiA, LAGLIDADG-like domain BAMF_3322 27c6a0127e36b5ed13972271aad8b9bb 316 Gene3D G3DSA:3.10.28.10 1 214 1.0E-67 T 12-10-2018 IPR027434 Homing endonuclease BAMF_2430 6f335f3d650cca58bb5bf0051e5aa038 710 SUPERFAMILY SSF109604 499 658 3.77E-15 T 12-10-2018 BAMF_2430 6f335f3d650cca58bb5bf0051e5aa038 710 Pfam PF07698 7TM receptor with intracellular HD hydrolase 276 475 6.1E-51 T 12-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain BAMF_2430 6f335f3d650cca58bb5bf0051e5aa038 710 Pfam PF01966 HD domain 500 641 2.1E-19 T 12-10-2018 IPR006674 HD domain BAMF_2430 6f335f3d650cca58bb5bf0051e5aa038 710 SMART SM00471 496 651 1.0E-11 T 12-10-2018 IPR003607 HD/PDEase domain BAMF_2430 6f335f3d650cca58bb5bf0051e5aa038 710 TIGRFAM TIGR00277 HDIG: HDIG domain 497 595 3.2E-29 T 12-10-2018 IPR006675 HDIG domain BAMF_2430 6f335f3d650cca58bb5bf0051e5aa038 710 Pfam PF07697 7TM-HD extracellular 53 269 4.7E-39 T 12-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain BAMF_2430 6f335f3d650cca58bb5bf0051e5aa038 710 Gene3D G3DSA:1.10.3210.10 473 667 9.3E-27 T 12-10-2018 BAMF_3620 d750af93d2fe4baa59982b07cccf224e 334 Gene3D G3DSA:3.40.50.11190 1 145 9.2E-13 T 12-10-2018 BAMF_3620 d750af93d2fe4baa59982b07cccf224e 334 Pfam PF00534 Glycosyl transferases group 1 161 262 3.5E-6 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 BAMF_3620 d750af93d2fe4baa59982b07cccf224e 334 Gene3D G3DSA:3.40.50.2000 146 287 1.0E-28 T 12-10-2018 BAMF_3620 d750af93d2fe4baa59982b07cccf224e 334 SUPERFAMILY SSF53756 1 331 2.92E-14 T 12-10-2018 BAMF_3331 35928f6938f22ff4edea3debc17d39c7 589 Gene3D G3DSA:1.20.1560.10 2 328 2.7E-79 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_3331 35928f6938f22ff4edea3debc17d39c7 589 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3331 35928f6938f22ff4edea3debc17d39c7 589 SUPERFAMILY SSF52540 335 577 5.65E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3331 35928f6938f22ff4edea3debc17d39c7 589 Pfam PF00664 ABC transporter transmembrane region 31 297 1.4E-44 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BAMF_3331 35928f6938f22ff4edea3debc17d39c7 589 SMART SM00382 366 553 1.6E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3331 35928f6938f22ff4edea3debc17d39c7 589 SUPERFAMILY SSF90123 12 326 4.97E-73 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_3331 35928f6938f22ff4edea3debc17d39c7 589 Pfam PF00005 ABC transporter 357 507 1.6E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3331 35928f6938f22ff4edea3debc17d39c7 589 Gene3D G3DSA:3.40.50.300 331 586 2.1E-88 T 12-10-2018 BAMF_2123 5cb48611e0878f6c890eca7a3300996b 168 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 19 142 1.6E-51 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BAMF_2123 5cb48611e0878f6c890eca7a3300996b 168 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 82 94 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BAMF_2123 5cb48611e0878f6c890eca7a3300996b 168 Gene3D G3DSA:2.70.70.10 9 167 2.3E-58 T 12-10-2018 IPR011055 Duplicated hybrid motif BAMF_2123 5cb48611e0878f6c890eca7a3300996b 168 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 20 140 5.0E-45 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BAMF_2123 5cb48611e0878f6c890eca7a3300996b 168 SUPERFAMILY SSF51261 14 164 1.13E-54 T 12-10-2018 IPR011055 Duplicated hybrid motif BAMF_0102 f51ce1251ab0398978107ae4d0907227 141 SUPERFAMILY SSF46906 67 140 8.24E-28 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BAMF_0102 f51ce1251ab0398978107ae4d0907227 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 12-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0102 f51ce1251ab0398978107ae4d0907227 141 SMART SM00649 9 140 3.7E-89 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BAMF_0102 f51ce1251ab0398978107ae4d0907227 141 Gene3D G3DSA:1.10.10.250 72 140 2.6E-30 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BAMF_0102 f51ce1251ab0398978107ae4d0907227 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 1.9E-31 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal BAMF_0102 f51ce1251ab0398978107ae4d0907227 141 SUPERFAMILY SSF54747 2 84 7.72E-31 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BAMF_0102 f51ce1251ab0398978107ae4d0907227 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 2.3E-26 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 BAMF_0102 f51ce1251ab0398978107ae4d0907227 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 32.064 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BAMF_0102 f51ce1251ab0398978107ae4d0907227 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 2.0E-16 T 12-10-2018 BAMF_0102 f51ce1251ab0398978107ae4d0907227 141 Gene3D G3DSA:3.30.1550.10 2 71 6.1E-35 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BAMF_0102 f51ce1251ab0398978107ae4d0907227 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.8E-65 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1871 d016107f7ef1ce2fe955e7ffa234a7c6 206 TIGRFAM TIGR00498 lexA: repressor LexA 1 205 2.4E-85 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BAMF_1871 d016107f7ef1ce2fe955e7ffa234a7c6 206 Pfam PF00717 Peptidase S24-like 123 189 1.7E-16 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BAMF_1871 d016107f7ef1ce2fe955e7ffa234a7c6 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 120 130 1.4E-9 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BAMF_1871 d016107f7ef1ce2fe955e7ffa234a7c6 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 160 172 1.4E-9 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BAMF_1871 d016107f7ef1ce2fe955e7ffa234a7c6 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 131 142 1.4E-9 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BAMF_1871 d016107f7ef1ce2fe955e7ffa234a7c6 206 Hamap MF_00015 LexA repressor [lexA]. 3 205 34.389 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BAMF_1871 d016107f7ef1ce2fe955e7ffa234a7c6 206 SUPERFAMILY SSF51306 82 203 3.66E-36 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BAMF_1871 d016107f7ef1ce2fe955e7ffa234a7c6 206 Gene3D G3DSA:2.10.109.10 88 205 4.2E-43 T 12-10-2018 BAMF_1871 d016107f7ef1ce2fe955e7ffa234a7c6 206 SUPERFAMILY SSF46785 3 70 1.17E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1871 d016107f7ef1ce2fe955e7ffa234a7c6 206 Pfam PF01726 LexA DNA binding domain 1 65 8.4E-29 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 BAMF_1871 d016107f7ef1ce2fe955e7ffa234a7c6 206 Gene3D G3DSA:1.10.10.10 2 68 1.4E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0871 b31e1888993d945544d62d900e612ebe 365 SUPERFAMILY SSF55811 229 359 1.52E-23 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BAMF_0871 b31e1888993d945544d62d900e612ebe 365 SMART SM00478 48 199 2.3E-53 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BAMF_0871 b31e1888993d945544d62d900e612ebe 365 Pfam PF14815 NUDIX domain 244 357 9.3E-24 T 12-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BAMF_0871 b31e1888993d945544d62d900e612ebe 365 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 15 280 3.5E-117 T 12-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 BAMF_0871 b31e1888993d945544d62d900e612ebe 365 SUPERFAMILY SSF48150 13 231 2.98E-71 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BAMF_0871 b31e1888993d945544d62d900e612ebe 365 SMART SM00525 200 220 0.0012 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BAMF_0871 b31e1888993d945544d62d900e612ebe 365 Gene3D G3DSA:3.90.79.10 233 362 3.1E-26 T 12-10-2018 BAMF_0871 b31e1888993d945544d62d900e612ebe 365 Gene3D G3DSA:1.10.340.30 30 141 1.9E-87 T 12-10-2018 BAMF_0871 b31e1888993d945544d62d900e612ebe 365 Gene3D G3DSA:1.10.1670.10 19 222 1.9E-87 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BAMF_0871 b31e1888993d945544d62d900e612ebe 365 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 44 175 4.3E-21 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BAMF_2125 30baedb240495281c44574376e3b84e2 169 Pfam PF14179 YppG-like protein 23 168 5.1E-18 T 12-10-2018 IPR025555 YppG-like protein BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 SMART SM00710 100 138 1600.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 SMART SM00710 259 281 1600.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 SMART SM00710 331 353 630.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 SMART SM00710 139 161 0.81 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 SMART SM00710 173 195 8.1 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 SMART SM00710 424 452 570.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 SMART SM00710 403 423 1800.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 SMART SM00710 310 330 140.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 SMART SM00710 526 551 2500.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 SMART SM00710 354 390 520.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 SMART SM00710 196 225 170.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 SMART SM00710 236 258 7500.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 SUPERFAMILY SSF51126 3 298 5.14E-36 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 Pfam PF12708 Pectate lyase superfamily protein 6 97 1.9E-10 T 12-10-2018 IPR024535 Pectate lyase superfamily protein BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 Pfam PF13229 Right handed beta helix region 173 287 5.9E-6 T 12-10-2018 IPR039448 Right handed beta helix domain BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 Pfam PF13229 Right handed beta helix region 308 433 8.8E-13 T 12-10-2018 IPR039448 Right handed beta helix domain BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 Gene3D G3DSA:2.160.20.10 330 517 2.1E-10 T 12-10-2018 IPR012334 Pectin lyase fold BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 SUPERFAMILY SSF51126 276 487 9.31E-16 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BAMF_0328 a6e4b6a2d9a0602137ebbdab1b3044b5 581 Gene3D G3DSA:2.160.20.10 6 329 1.3E-41 T 12-10-2018 IPR012334 Pectin lyase fold BAMF_0241 9a637a90d406bef5b286358621607f46 375 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 218 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BAMF_0241 9a637a90d406bef5b286358621607f46 375 Gene3D G3DSA:3.90.1150.10 15 362 6.5E-79 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_0241 9a637a90d406bef5b286358621607f46 375 SUPERFAMILY SSF53383 7 372 2.29E-70 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_0241 9a637a90d406bef5b286358621607f46 375 Gene3D G3DSA:3.40.640.10 30 284 6.5E-79 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_0241 9a637a90d406bef5b286358621607f46 375 Pfam PF00266 Aminotransferase class-V 52 340 9.0E-48 T 12-10-2018 IPR000192 Aminotransferase class V domain BAMF_3867 99a639b0318c921d6f27d8d3aeca983f 383 Pfam PF02958 Ecdysteroid kinase 120 298 3.0E-9 T 12-10-2018 IPR004119 Protein of unknown function DUF227 BAMF_3867 99a639b0318c921d6f27d8d3aeca983f 383 Gene3D G3DSA:3.90.1200.10 144 349 2.3E-7 T 12-10-2018 BAMF_3867 99a639b0318c921d6f27d8d3aeca983f 383 SUPERFAMILY SSF56112 56 343 3.18E-26 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BAMF_2191 8a8c5d5e3894db476b0848d3af9181c5 58 Pfam PF17313 Family of unknown function (DUF5359) 1 56 3.8E-23 T 12-10-2018 IPR035281 Protein of unknown function DUF5359 BAMF_2191 8a8c5d5e3894db476b0848d3af9181c5 58 ProDom PD052359 YPFB 1 57 5.0E-16 T 12-10-2018 IPR035281 Protein of unknown function DUF5359 BAMF_3655 dbe5723b78616794a6befbedd00a4ab0 513 ProSitePatterns PS01163 Galactose-1-phosphate uridyl transferase family 2 signature. 262 279 - T 12-10-2018 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BAMF_3655 dbe5723b78616794a6befbedd00a4ab0 513 TIGRFAM TIGR01239 galT_2: galactose-1-phosphate uridylyltransferase 6 502 4.1E-229 T 12-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BAMF_3655 dbe5723b78616794a6befbedd00a4ab0 513 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 250 450 4.2E-38 T 12-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BAMF_3655 dbe5723b78616794a6befbedd00a4ab0 513 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 513 255.241 T 12-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BAMF_3655 dbe5723b78616794a6befbedd00a4ab0 513 PIRSF PIRSF006005 1 506 3.1E-217 T 12-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BAMF_3655 dbe5723b78616794a6befbedd00a4ab0 513 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 54 234 3.7E-32 T 12-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BAMF_0728 1d7de22227462d5655aae80defc80e94 320 SUPERFAMILY SSF53850 64 288 1.21E-14 T 12-10-2018 BAMF_0728 1d7de22227462d5655aae80defc80e94 320 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 58 316 7.7E-22 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 BAMF_0728 1d7de22227462d5655aae80defc80e94 320 Gene3D G3DSA:3.40.190.150 31 314 3.7E-59 T 12-10-2018 BAMF_0728 1d7de22227462d5655aae80defc80e94 320 PIRSF PIRSF017082 1 320 4.1E-93 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 BAMF_0728 1d7de22227462d5655aae80defc80e94 320 Gene3D G3DSA:3.40.190.10 123 249 3.7E-59 T 12-10-2018 BAMF_1301 d69176cdc384d97f831c552f51c6b6e5 211 PRINTS PR01837 MgtC/SapB protein signature 92 116 2.9E-48 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BAMF_1301 d69176cdc384d97f831c552f51c6b6e5 211 PRINTS PR01837 MgtC/SapB protein signature 31 49 2.9E-48 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BAMF_1301 d69176cdc384d97f831c552f51c6b6e5 211 PRINTS PR01837 MgtC/SapB protein signature 65 87 2.9E-48 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BAMF_1301 d69176cdc384d97f831c552f51c6b6e5 211 PRINTS PR01837 MgtC/SapB protein signature 12 31 2.9E-48 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BAMF_1301 d69176cdc384d97f831c552f51c6b6e5 211 Pfam PF02308 MgtC family 9 136 6.0E-38 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 Gene3D G3DSA:2.30.210.10 572 587 3.4E-278 T 12-10-2018 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 Pfam PF08264 Anticodon-binding domain of tRNA 655 765 1.3E-19 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 SUPERFAMILY SSF52374 6 625 8.35E-145 T 12-10-2018 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 Pfam PF09334 tRNA synthetases class I (M) 39 170 9.9E-18 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 219 399 6.7E-69 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 412 603 7.0E-19 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 803 0.0 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 SUPERFAMILY SSF47323 619 803 6.11E-40 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 Gene3D G3DSA:3.10.20.590 744 803 9.0E-22 T 12-10-2018 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 213 232 2.1E-57 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 2.1E-57 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 2.1E-57 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 2.1E-57 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 2.1E-57 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 2.1E-57 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 2.1E-57 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 SUPERFAMILY SSF50677 224 410 6.8E-55 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 Gene3D G3DSA:1.10.730.10 599 740 4.6E-47 T 12-10-2018 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 803 23.248 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 Gene3D G3DSA:3.40.50.620 32 571 3.4E-278 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_2814 1edd90e98423358291e43f4f850bf2dc 804 Gene3D G3DSA:3.90.740.10 226 410 3.4E-278 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BAMF_1415 d0b8f27c3611d0b380d5506b3883ebbc 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 4 450 7.9E-208 T 12-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 BAMF_1415 d0b8f27c3611d0b380d5506b3883ebbc 451 SUPERFAMILY SSF54631 136 266 1.07E-29 T 12-10-2018 BAMF_1415 d0b8f27c3611d0b380d5506b3883ebbc 451 SMART SM00924 33 136 4.8E-26 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BAMF_1415 d0b8f27c3611d0b380d5506b3883ebbc 451 Pfam PF00571 CBS domain 137 192 6.8E-6 T 12-10-2018 IPR000644 CBS domain BAMF_1415 d0b8f27c3611d0b380d5506b3883ebbc 451 Pfam PF00571 CBS domain 200 254 8.8E-7 T 12-10-2018 IPR000644 CBS domain BAMF_1415 d0b8f27c3611d0b380d5506b3883ebbc 451 Pfam PF03448 MgtE intracellular N domain 33 133 2.0E-20 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BAMF_1415 d0b8f27c3611d0b380d5506b3883ebbc 451 SUPERFAMILY SSF158791 8 132 4.19E-26 T 12-10-2018 BAMF_1415 d0b8f27c3611d0b380d5506b3883ebbc 451 Pfam PF01769 Divalent cation transporter 320 441 5.1E-31 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 BAMF_1415 d0b8f27c3611d0b380d5506b3883ebbc 451 Gene3D G3DSA:1.10.357.20 272 449 4.0E-60 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain BAMF_1415 d0b8f27c3611d0b380d5506b3883ebbc 451 SMART SM00116 143 196 12.0 T 12-10-2018 IPR000644 CBS domain BAMF_1415 d0b8f27c3611d0b380d5506b3883ebbc 451 SMART SM00116 207 255 2.5E-4 T 12-10-2018 IPR000644 CBS domain BAMF_1415 d0b8f27c3611d0b380d5506b3883ebbc 451 SUPERFAMILY SSF161093 281 448 3.01E-53 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 BAMF_1415 d0b8f27c3611d0b380d5506b3883ebbc 451 Gene3D G3DSA:1.25.60.10 2 131 6.8E-19 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily BAMF_1415 d0b8f27c3611d0b380d5506b3883ebbc 451 Gene3D G3DSA:3.10.580.10 133 259 4.6E-41 T 12-10-2018 BAMF_3549 3ce9eef161618c27092922af14d730bf 285 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BAMF_3549 3ce9eef161618c27092922af14d730bf 285 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 7.7E-119 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BAMF_3549 3ce9eef161618c27092922af14d730bf 285 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 284 1.4E-104 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BAMF_3549 3ce9eef161618c27092922af14d730bf 285 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 285 7.9E-134 T 12-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 BAMF_3549 3ce9eef161618c27092922af14d730bf 285 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BAMF_3549 3ce9eef161618c27092922af14d730bf 285 PIRSF PIRSF001359 1 285 1.2E-127 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BAMF_3549 3ce9eef161618c27092922af14d730bf 285 Gene3D G3DSA:3.20.20.70 1 285 8.2E-114 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_3549 3ce9eef161618c27092922af14d730bf 285 SUPERFAMILY SSF51569 1 285 1.38E-105 T 12-10-2018 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 Gene3D G3DSA:1.10.10.10 289 373 2.7E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 PRINTS PR00046 Major sigma-70 factor signature 188 196 2.8E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 PRINTS PR00046 Major sigma-70 factor signature 348 359 2.8E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 PRINTS PR00046 Major sigma-70 factor signature 164 177 2.8E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 PRINTS PR00046 Major sigma-70 factor signature 333 348 2.8E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 PRINTS PR00046 Major sigma-70 factor signature 312 324 2.8E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 9 373 34.098 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 Gene3D G3DSA:1.10.601.10 100 135 7.0E-11 T 12-10-2018 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 Gene3D G3DSA:1.10.601.10 136 212 3.5E-51 T 12-10-2018 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 Pfam PF03979 Sigma-70 factor, region 1.1 16 85 1.7E-15 T 12-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 Pfam PF04539 Sigma-70 region 3 219 295 4.1E-33 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 138 361 1.0E-39 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 SUPERFAMILY SSF88946 101 210 4.32E-53 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 SUPERFAMILY SSF88659 270 371 5.42E-30 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 SUPERFAMILY SSF88659 213 286 1.29E-23 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 164 177 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 Gene3D G3DSA:1.10.10.10 213 288 3.9E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 Pfam PF04542 Sigma-70 region 2 140 209 3.3E-22 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 137 372 1.0E-125 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 Gene3D G3DSA:1.10.220.120 14 74 5.3E-9 T 12-10-2018 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 Pfam PF04545 Sigma-70, region 4 308 361 5.1E-20 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 333 359 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2418 15380e9ad3b518036345c2e16f7cc3d0 373 Pfam PF00140 Sigma-70 factor, region 1.2 102 135 5.2E-16 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_3558 a00c55e817dd10a671fbdde6f363b1f8 574 Gene3D G3DSA:3.40.50.300 329 572 8.8E-93 T 12-10-2018 BAMF_3558 a00c55e817dd10a671fbdde6f363b1f8 574 Pfam PF00664 ABC transporter transmembrane region 17 286 1.2E-62 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BAMF_3558 a00c55e817dd10a671fbdde6f363b1f8 574 Gene3D G3DSA:1.20.1560.10 1 315 9.3E-83 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_3558 a00c55e817dd10a671fbdde6f363b1f8 574 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3558 a00c55e817dd10a671fbdde6f363b1f8 574 SUPERFAMILY SSF90123 3 319 2.49E-79 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_3558 a00c55e817dd10a671fbdde6f363b1f8 574 SMART SM00382 358 544 2.6E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3558 a00c55e817dd10a671fbdde6f363b1f8 574 SUPERFAMILY SSF52540 323 569 1.66E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3558 a00c55e817dd10a671fbdde6f363b1f8 574 Pfam PF00005 ABC transporter 349 498 3.0E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3701 75cb054ec862ed10d4f657fa22991148 439 PIRSF PIRSF006351 1 432 9.3E-144 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 BAMF_3701 75cb054ec862ed10d4f657fa22991148 439 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 9 425 3.2E-183 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 BAMF_3701 75cb054ec862ed10d4f657fa22991148 439 Pfam PF02378 Phosphotransferase system, EIIC 26 350 9.1E-73 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BAMF_3701 75cb054ec862ed10d4f657fa22991148 439 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 9 425 3.2E-183 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 BAMF_2991 00832faaf0859502cdde85c4e96f23ea 71 SUPERFAMILY SSF160582 1 66 1.44E-28 T 12-10-2018 IPR038020 MbtH-like domain superfamily BAMF_2991 00832faaf0859502cdde85c4e96f23ea 71 SMART SM00923 3 53 2.5E-26 T 12-10-2018 IPR005153 MbtH-like domain BAMF_2991 00832faaf0859502cdde85c4e96f23ea 71 Gene3D G3DSA:3.90.820.10 1 70 4.5E-29 T 12-10-2018 BAMF_2991 00832faaf0859502cdde85c4e96f23ea 71 Pfam PF03621 MbtH-like protein 1 52 2.6E-24 T 12-10-2018 IPR005153 MbtH-like domain BAMF_0998 111795b80481f5f88dc82684afd5fe18 531 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 1.4E-11 T 12-10-2018 BAMF_0998 111795b80481f5f88dc82684afd5fe18 531 PRINTS PR01036 Tetracycline resistance protein TetB signature 302 326 1.4E-11 T 12-10-2018 BAMF_0998 111795b80481f5f88dc82684afd5fe18 531 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 1.4E-11 T 12-10-2018 BAMF_0998 111795b80481f5f88dc82684afd5fe18 531 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 1.4E-11 T 12-10-2018 BAMF_0998 111795b80481f5f88dc82684afd5fe18 531 SUPERFAMILY SSF103473 12 513 5.62E-75 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0998 111795b80481f5f88dc82684afd5fe18 531 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 503 1.5E-192 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BAMF_0998 111795b80481f5f88dc82684afd5fe18 531 Gene3D G3DSA:1.20.1720.10 14 250 6.2E-43 T 12-10-2018 BAMF_0998 111795b80481f5f88dc82684afd5fe18 531 Pfam PF07690 Major Facilitator Superfamily 19 409 4.1E-56 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_1777 578f09087fd3d77b60991bf13f29a80e 625 Pfam PF08676 MutL C terminal dimerisation domain 440 581 1.4E-46 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 BAMF_1777 578f09087fd3d77b60991bf13f29a80e 625 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 306 1.7E-100 T 12-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 BAMF_1777 578f09087fd3d77b60991bf13f29a80e 625 SUPERFAMILY SSF54211 190 326 1.02E-35 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_1777 578f09087fd3d77b60991bf13f29a80e 625 SMART SM00853 439 581 8.9E-53 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 BAMF_1777 578f09087fd3d77b60991bf13f29a80e 625 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 12-10-2018 IPR014762 DNA mismatch repair, conserved site BAMF_1777 578f09087fd3d77b60991bf13f29a80e 625 Gene3D G3DSA:2.30.42.20 440 623 1.7E-66 T 12-10-2018 BAMF_1777 578f09087fd3d77b60991bf13f29a80e 625 Gene3D G3DSA:3.30.565.10 4 212 1.0E-61 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1777 578f09087fd3d77b60991bf13f29a80e 625 SUPERFAMILY SSF55874 4 213 8.12E-52 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1777 578f09087fd3d77b60991bf13f29a80e 625 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 325 1.9E-35 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 BAMF_1777 578f09087fd3d77b60991bf13f29a80e 625 Gene3D G3DSA:3.30.1370.100 481 574 1.7E-66 T 12-10-2018 BAMF_1777 578f09087fd3d77b60991bf13f29a80e 625 SUPERFAMILY SSF118116 435 623 1.07E-53 T 12-10-2018 IPR037198 MutL, C-terminal domain superfamily BAMF_1777 578f09087fd3d77b60991bf13f29a80e 625 SMART SM01340 208 326 3.5E-51 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 BAMF_1777 578f09087fd3d77b60991bf13f29a80e 625 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 621 27.515 T 12-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 BAMF_1777 578f09087fd3d77b60991bf13f29a80e 625 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 97 3.4E-11 T 12-10-2018 BAMF_1777 578f09087fd3d77b60991bf13f29a80e 625 Gene3D G3DSA:3.30.230.10 213 325 9.1E-31 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BAMF_3763 70e7895a1fe7d64efebc67674072d0ef 433 SUPERFAMILY SSF47648 1 69 4.71E-22 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_3763 70e7895a1fe7d64efebc67674072d0ef 433 SUPERFAMILY SSF54680 331 431 2.09E-30 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_3763 70e7895a1fe7d64efebc67674072d0ef 433 Pfam PF00591 Glycosyl transferase family, a/b domain 78 306 3.4E-51 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_3763 70e7895a1fe7d64efebc67674072d0ef 433 PIRSF PIRSF000478 1 433 2.8E-173 T 12-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_3763 70e7895a1fe7d64efebc67674072d0ef 433 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 3 417 3.7E-184 T 12-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_3763 70e7895a1fe7d64efebc67674072d0ef 433 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 418 9.4E-29 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_3763 70e7895a1fe7d64efebc67674072d0ef 433 SUPERFAMILY SSF52418 69 329 2.35E-93 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_3763 70e7895a1fe7d64efebc67674072d0ef 433 Gene3D G3DSA:3.40.1030.10 69 335 1.2E-119 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_3763 70e7895a1fe7d64efebc67674072d0ef 433 Gene3D G3DSA:1.20.970.10 1 67 1.5E-29 T 12-10-2018 BAMF_3763 70e7895a1fe7d64efebc67674072d0ef 433 Gene3D G3DSA:3.90.1170.30 336 423 2.7E-36 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_3763 70e7895a1fe7d64efebc67674072d0ef 433 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 66 2.1E-20 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_3763 70e7895a1fe7d64efebc67674072d0ef 433 SMART SM00941 345 418 1.5E-33 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_3763 70e7895a1fe7d64efebc67674072d0ef 433 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 12-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 Gene3D G3DSA:3.20.20.10 14 230 1.1E-70 T 12-10-2018 IPR029066 PLP-binding barrel BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 SUPERFAMILY SSF51419 12 249 1.6E-63 T 12-10-2018 IPR029066 PLP-binding barrel BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 Pfam PF01168 Alanine racemase, N-terminal domain 12 235 4.2E-65 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 TIGRFAM TIGR00492 alr: alanine racemase 6 378 5.0E-145 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 SMART SM01005 250 378 3.4E-56 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 36 46 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 Hamap MF_01201 Alanine racemase. 5 378 34.419 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 PRINTS PR00992 Alanine racemase signature 305 322 7.7E-67 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 PRINTS PR00992 Alanine racemase signature 67 85 7.7E-67 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 PRINTS PR00992 Alanine racemase signature 208 235 7.7E-67 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 PRINTS PR00992 Alanine racemase signature 360 373 7.7E-67 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 PRINTS PR00992 Alanine racemase signature 284 299 7.7E-67 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 PRINTS PR00992 Alanine racemase signature 130 142 7.7E-67 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 PRINTS PR00992 Alanine racemase signature 31 47 7.7E-67 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 PRINTS PR00992 Alanine racemase signature 267 282 7.7E-67 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 PRINTS PR00992 Alanine racemase signature 165 176 7.7E-67 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 SUPERFAMILY SSF50621 245 385 1.33E-45 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 Gene3D G3DSA:2.40.37.10 239 393 8.8E-57 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BAMF_2325 ebbf491ceb79a8e5982c4eb2f617f399 393 Pfam PF00842 Alanine racemase, C-terminal domain 250 377 7.9E-40 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_1144 1cfbf3de3a7fa1a126af9b55335d25ea 398 PRINTS PR01035 Tetracycline resistance protein signature 341 364 5.8E-18 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_1144 1cfbf3de3a7fa1a126af9b55335d25ea 398 PRINTS PR01035 Tetracycline resistance protein signature 136 158 5.8E-18 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_1144 1cfbf3de3a7fa1a126af9b55335d25ea 398 PRINTS PR01035 Tetracycline resistance protein signature 164 184 5.8E-18 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_1144 1cfbf3de3a7fa1a126af9b55335d25ea 398 PRINTS PR01035 Tetracycline resistance protein signature 21 37 5.8E-18 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_1144 1cfbf3de3a7fa1a126af9b55335d25ea 398 Pfam PF07690 Major Facilitator Superfamily 16 352 1.2E-53 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_1144 1cfbf3de3a7fa1a126af9b55335d25ea 398 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_1144 1cfbf3de3a7fa1a126af9b55335d25ea 398 Gene3D G3DSA:1.20.1250.20 4 390 1.6E-70 T 12-10-2018 BAMF_1144 1cfbf3de3a7fa1a126af9b55335d25ea 398 SUPERFAMILY SSF103473 1 390 7.72E-74 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_1368 b48c06c838eae5c2fba9ca41c6628489 87 Pfam PF04688 SPP1 phage holin 5 81 3.9E-29 T 12-10-2018 IPR006479 Holin BAMF_1368 b48c06c838eae5c2fba9ca41c6628489 87 ProDom PD008023 HOLIN TRANSMEMBRANE MEMBRANE PROPHAGE FAMILY BHLB SPP1 5'REGION HOLIN ORF050 5 87 2.0E-22 T 12-10-2018 IPR006479 Holin BAMF_1368 b48c06c838eae5c2fba9ca41c6628489 87 TIGRFAM TIGR01592 holin_SPP1: holin, SPP1 family 5 84 2.2E-31 T 12-10-2018 IPR006479 Holin BAMF_3470 33f5c79e9af1c4cd1659f90c918106df 248 Pfam PF02706 Chain length determinant protein 6 94 3.6E-21 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 BAMF_3470 33f5c79e9af1c4cd1659f90c918106df 248 Pfam PF13807 G-rich domain on putative tyrosine kinase 142 194 1.4E-6 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain BAMF_0119 059205cfeae83aba168bdd4fb5a3b074 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 4.5E-57 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BAMF_0119 059205cfeae83aba168bdd4fb5a3b074 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 12-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0119 059205cfeae83aba168bdd4fb5a3b074 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 4.1E-141 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 BAMF_0119 059205cfeae83aba168bdd4fb5a3b074 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 49.764 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 BAMF_0119 059205cfeae83aba168bdd4fb5a3b074 277 SMART SM01383 42 118 7.8E-45 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0119 059205cfeae83aba168bdd4fb5a3b074 277 Gene3D G3DSA:2.30.30.30 118 196 8.5E-35 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 BAMF_0119 059205cfeae83aba168bdd4fb5a3b074 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 8.3E-33 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0119 059205cfeae83aba168bdd4fb5a3b074 277 SMART SM01382 124 253 3.0E-92 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BAMF_0119 059205cfeae83aba168bdd4fb5a3b074 277 Gene3D G3DSA:2.40.50.140 1 114 2.3E-48 T 12-10-2018 BAMF_0119 059205cfeae83aba168bdd4fb5a3b074 277 PIRSF PIRSF002158 3 276 7.0E-99 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0119 059205cfeae83aba168bdd4fb5a3b074 277 SUPERFAMILY SSF50249 2 125 5.83E-51 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_0119 059205cfeae83aba168bdd4fb5a3b074 277 SUPERFAMILY SSF50104 126 273 5.54E-61 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily BAMF_0119 059205cfeae83aba168bdd4fb5a3b074 277 Gene3D G3DSA:4.10.950.10 197 276 9.1E-36 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_2107 1f37ca8513427e49959d2d5982286baa 220 Gene3D G3DSA:3.40.630.30 13 218 1.8E-39 T 12-10-2018 BAMF_2107 1f37ca8513427e49959d2d5982286baa 220 Pfam PF13302 Acetyltransferase (GNAT) domain 31 175 2.3E-13 T 12-10-2018 IPR000182 GNAT domain BAMF_2107 1f37ca8513427e49959d2d5982286baa 220 SUPERFAMILY SSF55729 19 201 6.42E-32 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_3176 39e8ba6a5093c281723bb33311bd8be7 160 PIRSF PIRSF030780 1 158 7.5E-21 T 12-10-2018 IPR016956 Inner membrane protein YdjM BAMF_3176 39e8ba6a5093c281723bb33311bd8be7 160 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 151 1.3E-32 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase BAMF_3055 bda607d8287a56ba3e48ec091d2b1261 429 Pfam PF01547 Bacterial extracellular solute-binding protein 49 338 3.6E-47 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein BAMF_3055 bda607d8287a56ba3e48ec091d2b1261 429 SUPERFAMILY SSF53850 25 423 7.91E-86 T 12-10-2018 BAMF_3055 bda607d8287a56ba3e48ec091d2b1261 429 Gene3D G3DSA:3.40.190.10 155 411 1.1E-99 T 12-10-2018 BAMF_3055 bda607d8287a56ba3e48ec091d2b1261 429 Gene3D G3DSA:3.40.190.10 56 381 1.1E-99 T 12-10-2018 BAMF_1060 391dea57376b3eaa7eb4709268bb1ee5 283 ProSitePatterns PS00770 Aminotransferases class-IV signature. 176 205 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 BAMF_1060 391dea57376b3eaa7eb4709268bb1ee5 283 TIGRFAM TIGR01121 D_amino_aminoT: D-amino-acid transaminase 2 276 1.5E-130 T 12-10-2018 IPR005784 D-amino acid aminotransferase GO:0008483|GO:0030170|GO:0046416 KEGG: 00310+2.6.1.21|KEGG: 00330+2.6.1.21|KEGG: 00360+2.6.1.21|KEGG: 00472+2.6.1.21|KEGG: 00473+2.6.1.21 BAMF_1060 391dea57376b3eaa7eb4709268bb1ee5 283 Pfam PF01063 Amino-transferase class IV 29 248 8.9E-47 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BAMF_1060 391dea57376b3eaa7eb4709268bb1ee5 283 SUPERFAMILY SSF56752 2 275 1.11E-75 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BAMF_1060 391dea57376b3eaa7eb4709268bb1ee5 283 Gene3D G3DSA:3.20.10.10 118 281 2.6E-57 T 12-10-2018 BAMF_1060 391dea57376b3eaa7eb4709268bb1ee5 283 Gene3D G3DSA:3.30.470.10 1 116 4.8E-34 T 12-10-2018 BAMF_2531 18d6cde9dfa74c1e841a53c8aafe08ad 163 Pfam PF07849 Protein of unknown function (DUF1641) 119 155 2.5E-15 T 12-10-2018 IPR012440 Protein of unknown function DUF1641 BAMF_2366 fee6136fa2edd3616a8c4669fdf33f00 194 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 105 116 3.4E-7 T 12-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 BAMF_2366 fee6136fa2edd3616a8c4669fdf33f00 194 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 47 62 3.4E-7 T 12-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 BAMF_2366 fee6136fa2edd3616a8c4669fdf33f00 194 Pfam PF00717 Peptidase S24-like 47 99 2.1E-9 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BAMF_2366 fee6136fa2edd3616a8c4669fdf33f00 194 SUPERFAMILY SSF51306 40 96 2.93E-9 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BAMF_2366 fee6136fa2edd3616a8c4669fdf33f00 194 TIGRFAM TIGR02228 sigpep_I_arch: signal peptidase I 6 168 1.3E-53 T 12-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 BAMF_0366 5f8fd842219081e2489e5cbe4d3b2bc4 477 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 390 474 3.5E-13 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BAMF_0366 5f8fd842219081e2489e5cbe4d3b2bc4 477 Pfam PF02378 Phosphotransferase system, EIIC 22 280 5.5E-18 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BAMF_0366 5f8fd842219081e2489e5cbe4d3b2bc4 477 SUPERFAMILY SSF52794 389 476 2.88E-27 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BAMF_0366 5f8fd842219081e2489e5cbe4d3b2bc4 477 Gene3D G3DSA:3.40.50.2300 378 477 2.2E-39 T 12-10-2018 BAMF_0366 5f8fd842219081e2489e5cbe4d3b2bc4 477 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 12 350 1.2E-187 T 12-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 BAMF_0977 8e512ff295f6cd9648214f8b6cb85139 481 Pfam PF00199 Catalase 7 388 3.4E-199 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_0977 8e512ff295f6cd9648214f8b6cb85139 481 SMART SM01060 7 391 1.0E-297 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_0977 8e512ff295f6cd9648214f8b6cb85139 481 PRINTS PR00067 Catalase signature 288 315 1.6E-76 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_0977 8e512ff295f6cd9648214f8b6cb85139 481 PRINTS PR00067 Catalase signature 320 346 1.6E-76 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_0977 8e512ff295f6cd9648214f8b6cb85139 481 PRINTS PR00067 Catalase signature 20 43 1.6E-76 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_0977 8e512ff295f6cd9648214f8b6cb85139 481 PRINTS PR00067 Catalase signature 123 141 1.6E-76 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_0977 8e512ff295f6cd9648214f8b6cb85139 481 PRINTS PR00067 Catalase signature 104 121 1.6E-76 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_0977 8e512ff295f6cd9648214f8b6cb85139 481 PRINTS PR00067 Catalase signature 83 101 1.6E-76 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_0977 8e512ff295f6cd9648214f8b6cb85139 481 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_0977 8e512ff295f6cd9648214f8b6cb85139 481 PIRSF PIRSF038928 1 478 4.2E-228 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_0977 8e512ff295f6cd9648214f8b6cb85139 481 Gene3D G3DSA:2.40.180.10 2 477 2.2E-233 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 BAMF_0977 8e512ff295f6cd9648214f8b6cb85139 481 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_0977 8e512ff295f6cd9648214f8b6cb85139 481 SUPERFAMILY SSF56634 4 480 9.68E-219 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_0977 8e512ff295f6cd9648214f8b6cb85139 481 Pfam PF06628 Catalase-related immune-responsive 413 475 1.4E-26 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_0652 d4a0c9f45f7aec6de7514836f89935cc 331 Pfam PF17479 Protein of unknown function (DUF3048) C-terminal domain 210 314 7.8E-22 T 12-10-2018 IPR035328 Protein of unknown function DUF3048, C-terminal domain BAMF_0652 d4a0c9f45f7aec6de7514836f89935cc 331 SUPERFAMILY SSF159774 35 324 4.18E-95 T 12-10-2018 IPR023158 YerB-like superfamily BAMF_0652 d4a0c9f45f7aec6de7514836f89935cc 331 Pfam PF11258 Protein of unknown function (DUF3048) N-terminal domain 37 179 1.2E-51 T 12-10-2018 IPR021416 Protein of unknown function DUF3048, N-terminal BAMF_0652 d4a0c9f45f7aec6de7514836f89935cc 331 Gene3D G3DSA:3.50.90.10 21 331 3.1E-124 T 12-10-2018 IPR023158 YerB-like superfamily BAMF_3349 0221e64158e3fbc12d64bd8fa4c623e2 1289 Pfam PF00932 Lamin Tail Domain 152 283 1.2E-8 T 12-10-2018 IPR001322 Lamin tail domain BAMF_3349 0221e64158e3fbc12d64bd8fa4c623e2 1289 SUPERFAMILY SSF56300 918 1118 6.84E-30 T 12-10-2018 BAMF_3349 0221e64158e3fbc12d64bd8fa4c623e2 1289 Pfam PF00149 Calcineurin-like phosphoesterase 922 1117 1.6E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BAMF_3349 0221e64158e3fbc12d64bd8fa4c623e2 1289 PIRSF PIRSF036444 4 1289 0.0 T 12-10-2018 IPR011401 Phosphoesterase, YvnB BAMF_3349 0221e64158e3fbc12d64bd8fa4c623e2 1289 Gene3D G3DSA:3.60.21.10 921 1131 4.5E-18 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BAMF_3349 0221e64158e3fbc12d64bd8fa4c623e2 1289 Gene3D G3DSA:2.60.40.10 658 739 3.3E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold BAMF_2682 1d961f1d9fdf6ab18b9457fe9c705083 265 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 9 233 5.7E-37 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA BAMF_2682 1d961f1d9fdf6ab18b9457fe9c705083 265 Gene3D G3DSA:3.40.50.1000 8 236 7.3E-66 T 12-10-2018 IPR023214 HAD superfamily BAMF_2682 1d961f1d9fdf6ab18b9457fe9c705083 265 SUPERFAMILY SSF56784 8 256 1.66E-56 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_2682 1d961f1d9fdf6ab18b9457fe9c705083 265 Pfam PF13344 Haloacid dehalogenase-like hydrolase 9 108 2.6E-22 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA BAMF_2682 1d961f1d9fdf6ab18b9457fe9c705083 265 Gene3D G3DSA:3.40.50.1000 86 184 7.3E-66 T 12-10-2018 IPR023214 HAD superfamily BAMF_2682 1d961f1d9fdf6ab18b9457fe9c705083 265 Pfam PF13242 HAD-hyrolase-like 183 254 1.5E-17 T 12-10-2018 BAMF_2326 370c17066e2f7bc81d65743b2e0f97fd 266 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 155 265 2.0E-59 T 12-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 BAMF_2326 370c17066e2f7bc81d65743b2e0f97fd 266 SMART SM00448 4 119 1.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2326 370c17066e2f7bc81d65743b2e0f97fd 266 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 2 266 2.9E-130 T 12-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 BAMF_2326 370c17066e2f7bc81d65743b2e0f97fd 266 SUPERFAMILY SSF46894 150 264 4.08E-48 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_2326 370c17066e2f7bc81d65743b2e0f97fd 266 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 156 259 7.1E-45 T 12-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 BAMF_2326 370c17066e2f7bc81d65743b2e0f97fd 266 Gene3D G3DSA:1.10.10.10 147 266 2.3E-55 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2326 370c17066e2f7bc81d65743b2e0f97fd 266 PIRSF PIRSF002937 1 266 7.6E-135 T 12-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 BAMF_2326 370c17066e2f7bc81d65743b2e0f97fd 266 SUPERFAMILY SSF52172 2 126 4.7E-32 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_2326 370c17066e2f7bc81d65743b2e0f97fd 266 Gene3D G3DSA:3.40.50.2300 1 133 5.4E-32 T 12-10-2018 BAMF_2326 370c17066e2f7bc81d65743b2e0f97fd 266 Pfam PF00072 Response regulator receiver domain 6 119 3.0E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0953 cd40c8b4926ab8faff583afc9edff2dd 741 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 1 209 1.2E-50 T 12-10-2018 IPR010090 Phage tail tape measure protein BAMF_0953 cd40c8b4926ab8faff583afc9edff2dd 741 Pfam PF10145 Phage-related minor tail protein 1 102 2.7E-23 T 12-10-2018 IPR010090 Phage tail tape measure protein BAMF_3107 930ec831aaf11cbd17287b559923900b 147 SUPERFAMILY SSF82649 2 142 2.88E-51 T 12-10-2018 BAMF_3107 930ec831aaf11cbd17287b559923900b 147 Pfam PF01592 NifU-like N terminal domain 11 128 3.1E-39 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 BAMF_3107 930ec831aaf11cbd17287b559923900b 147 Gene3D G3DSA:3.90.1010.10 1 147 3.4E-64 T 12-10-2018 BAMF_3107 930ec831aaf11cbd17287b559923900b 147 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 7 140 3.4E-58 T 12-10-2018 BAMF_0976 3afa67b5818ca39aa3e4c80ede4539c1 321 SMART SM00382 41 241 6.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0976 3afa67b5818ca39aa3e4c80ede4539c1 321 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0976 3afa67b5818ca39aa3e4c80ede4539c1 321 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 1.4E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BAMF_0976 3afa67b5818ca39aa3e4c80ede4539c1 321 SUPERFAMILY SSF52540 5 254 3.55E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0976 3afa67b5818ca39aa3e4c80ede4539c1 321 Pfam PF00005 ABC transporter 33 184 1.5E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0976 3afa67b5818ca39aa3e4c80ede4539c1 321 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 300 1.0E-18 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BAMF_0976 3afa67b5818ca39aa3e4c80ede4539c1 321 Gene3D G3DSA:3.40.50.300 3 321 3.6E-97 T 12-10-2018 BAMF_3173 fed81887c4cfe8f132a2a7f8a129fbcc 304 SUPERFAMILY SSF53335 7 303 3.12E-53 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_3173 fed81887c4cfe8f132a2a7f8a129fbcc 304 Gene3D G3DSA:3.40.50.150 2 303 3.5E-41 T 12-10-2018 BAMF_3173 fed81887c4cfe8f132a2a7f8a129fbcc 304 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 8 283 2.6E-39 T 12-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 BAMF_3173 fed81887c4cfe8f132a2a7f8a129fbcc 304 Pfam PF04072 Leucine carboxyl methyltransferase 11 206 1.1E-42 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 BAMF_2967 52610a737eb6228ca337910a9ce9c064 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_2967 52610a737eb6228ca337910a9ce9c064 214 SMART SM00421 151 208 3.4E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_2967 52610a737eb6228ca337910a9ce9c064 214 SMART SM00448 2 117 6.6E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2967 52610a737eb6228ca337910a9ce9c064 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.5E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_2967 52610a737eb6228ca337910a9ce9c064 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.5E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_2967 52610a737eb6228ca337910a9ce9c064 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.5E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_2967 52610a737eb6228ca337910a9ce9c064 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 9.2E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_2967 52610a737eb6228ca337910a9ce9c064 214 Gene3D G3DSA:3.40.50.12740 3 214 1.1E-43 T 12-10-2018 BAMF_2967 52610a737eb6228ca337910a9ce9c064 214 SUPERFAMILY SSF46894 147 210 1.5E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_2967 52610a737eb6228ca337910a9ce9c064 214 SUPERFAMILY SSF52172 1 129 4.84E-20 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_2967 52610a737eb6228ca337910a9ce9c064 214 Pfam PF00072 Response regulator receiver domain 4 117 1.2E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0247 4e1b19d56de05dfd9d59fd89bde13d7c 356 Pfam PF05225 helix-turn-helix, Psq domain 294 344 5.8E-16 T 12-10-2018 IPR007889 DNA binding HTH domain, Psq-type GO:0003677 BAMF_0247 4e1b19d56de05dfd9d59fd89bde13d7c 356 SUPERFAMILY SSF47954 269 339 7.31E-7 T 12-10-2018 IPR036915 Cyclin-like superfamily BAMF_0247 4e1b19d56de05dfd9d59fd89bde13d7c 356 Gene3D G3DSA:3.10.450.50 1 25 2.4E-6 T 12-10-2018 BAMF_0247 4e1b19d56de05dfd9d59fd89bde13d7c 356 Pfam PF02810 SEC-C motif 6 23 1.1E-9 T 12-10-2018 IPR004027 SEC-C motif BAMF_0247 4e1b19d56de05dfd9d59fd89bde13d7c 356 SUPERFAMILY SSF103642 4 24 2.29E-7 T 12-10-2018 BAMF_3546 319ee6cb80421cd9bcc6b299b27aa0d9 321 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 320 3.2E-162 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BAMF_3546 319ee6cb80421cd9bcc6b299b27aa0d9 321 Gene3D G3DSA:3.30.540.10 7 309 8.8E-132 T 12-10-2018 BAMF_3546 319ee6cb80421cd9bcc6b299b27aa0d9 321 SUPERFAMILY SSF56655 1 312 1.1E-109 T 12-10-2018 BAMF_3546 319ee6cb80421cd9bcc6b299b27aa0d9 321 PIRSF PIRSF004532 1 320 3.8E-149 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BAMF_3546 319ee6cb80421cd9bcc6b299b27aa0d9 321 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 309 4.9E-141 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BAMF_3546 319ee6cb80421cd9bcc6b299b27aa0d9 321 Gene3D G3DSA:3.40.190.90 122 283 8.8E-132 T 12-10-2018 BAMF_1061 9cfc88eed44c46c9d2c30b7f90333a0a 194 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BAMF_1061 9cfc88eed44c46c9d2c30b7f90333a0a 194 SUPERFAMILY SSF46689 3 83 6.14E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_1061 9cfc88eed44c46c9d2c30b7f90333a0a 194 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 82 193 1.5E-19 T 12-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal BAMF_1061 9cfc88eed44c46c9d2c30b7f90333a0a 194 Gene3D G3DSA:1.10.357.10 1 193 9.3E-50 T 12-10-2018 BAMF_1061 9cfc88eed44c46c9d2c30b7f90333a0a 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 7.3E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_1061 9cfc88eed44c46c9d2c30b7f90333a0a 194 SUPERFAMILY SSF48498 79 193 2.56E-25 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 Gene3D G3DSA:1.10.220.30 199 338 7.1E-50 T 12-10-2018 BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 PIRSF PIRSF003161 3 338 1.4E-126 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 Gene3D G3DSA:1.10.220.30 107 198 7.1E-34 T 12-10-2018 BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 230 250 5.5E-79 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 9 25 5.5E-79 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 252 272 5.5E-79 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 38 64 5.5E-79 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 118 141 5.5E-79 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 276 302 5.5E-79 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 199 224 5.5E-79 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 SUPERFAMILY SSF48029 118 329 8.5E-70 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 Pfam PF14842 FliG N-terminal domain 8 111 5.1E-36 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 Gene3D G3DSA:1.10.220.30 1 88 3.6E-19 T 12-10-2018 BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 SUPERFAMILY SSF48029 9 104 2.62E-20 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 338 1.0E-163 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 Pfam PF01706 FliG C-terminal domain 222 328 1.7E-42 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal BAMF_1693 617cc0e76317477e47c72af99d2231b1 338 Pfam PF14841 FliG middle domain 119 193 7.6E-31 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 7.7E-150 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 PIRSF PIRSF001553 1 291 2.2E-134 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 SMART SM00881 4 100 2.5E-36 T 12-10-2018 IPR003781 CoA-binding GO:0048037 BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 SUPERFAMILY SSF51735 1 122 4.28E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 12-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 12-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 Pfam PF00549 CoA-ligase 151 267 3.1E-19 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 SUPERFAMILY SSF52210 123 287 7.59E-55 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 Pfam PF02629 CoA binding domain 6 99 1.5E-31 T 12-10-2018 IPR003781 CoA-binding GO:0048037 BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 Gene3D G3DSA:3.40.50.261 124 289 6.4E-72 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 Gene3D G3DSA:3.40.50.720 1 123 7.4E-53 T 12-10-2018 BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.93 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.2E-40 T 12-10-2018 BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.2E-40 T 12-10-2018 BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.2E-40 T 12-10-2018 BAMF_1681 b5432f6b896bcdb54ca8039657c83978 300 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.2E-40 T 12-10-2018 BAMF_0031 3321441e3907c492576dc607f6602761 329 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 17 199 1.4E-66 T 12-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_0031 3321441e3907c492576dc607f6602761 329 SUPERFAMILY SSF52540 12 198 4.38E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0031 3321441e3907c492576dc607f6602761 329 Gene3D G3DSA:3.40.50.300 7 169 3.6E-54 T 12-10-2018 BAMF_0031 3321441e3907c492576dc607f6602761 329 Pfam PF13177 DNA polymerase III, delta subunit 12 169 1.8E-59 T 12-10-2018 BAMF_0031 3321441e3907c492576dc607f6602761 329 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 240 326 4.9E-7 T 12-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2837 0800ea7f49ab54f206f2d9d9e3b259fe 632 SUPERFAMILY SSF52402 228 605 6.9E-87 T 12-10-2018 BAMF_2837 0800ea7f49ab54f206f2d9d9e3b259fe 632 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 547 2.4E-182 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BAMF_2837 0800ea7f49ab54f206f2d9d9e3b259fe 632 Pfam PF13537 Glutamine amidotransferase domain 51 168 4.7E-45 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BAMF_2837 0800ea7f49ab54f206f2d9d9e3b259fe 632 PIRSF PIRSF001589 1 628 7.5E-196 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BAMF_2837 0800ea7f49ab54f206f2d9d9e3b259fe 632 SUPERFAMILY SSF56235 1 222 7.89E-60 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BAMF_2837 0800ea7f49ab54f206f2d9d9e3b259fe 632 Gene3D G3DSA:3.60.20.10 3 188 4.2E-63 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BAMF_2837 0800ea7f49ab54f206f2d9d9e3b259fe 632 Pfam PF00733 Asparagine synthase 240 610 6.5E-112 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 BAMF_1722 1a4d9be4fffa5f4556a1515699ffcd99 293 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 293 6.3E-129 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BAMF_1722 1a4d9be4fffa5f4556a1515699ffcd99 293 Gene3D G3DSA:1.10.286.20 199 236 5.4E-20 T 12-10-2018 BAMF_1722 1a4d9be4fffa5f4556a1515699ffcd99 293 SUPERFAMILY SSF54713 152 292 4.97E-52 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BAMF_1722 1a4d9be4fffa5f4556a1515699ffcd99 293 Hamap MF_00050 Elongation factor Ts [tsf]. 1 291 82.535 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BAMF_1722 1a4d9be4fffa5f4556a1515699ffcd99 293 Gene3D G3DSA:1.10.8.10 1 55 1.5E-27 T 12-10-2018 BAMF_1722 1a4d9be4fffa5f4556a1515699ffcd99 293 Gene3D G3DSA:3.30.479.20 56 147 7.5E-26 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BAMF_1722 1a4d9be4fffa5f4556a1515699ffcd99 293 Pfam PF00889 Elongation factor TS 70 274 2.1E-76 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 BAMF_1722 1a4d9be4fffa5f4556a1515699ffcd99 293 SUPERFAMILY SSF54713 55 144 7.59E-23 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BAMF_1722 1a4d9be4fffa5f4556a1515699ffcd99 293 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BAMF_1722 1a4d9be4fffa5f4556a1515699ffcd99 293 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BAMF_1722 1a4d9be4fffa5f4556a1515699ffcd99 293 SUPERFAMILY SSF46934 3 54 1.8E-20 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 BAMF_2411 d236373c3b3d60c5ae21fda410bba6b7 297 SMART SM00518 3 285 2.1E-133 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BAMF_2411 d236373c3b3d60c5ae21fda410bba6b7 297 SUPERFAMILY SSF51658 2 294 1.05E-102 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily BAMF_2411 d236373c3b3d60c5ae21fda410bba6b7 297 Gene3D G3DSA:3.20.20.150 1 297 9.7E-104 T 12-10-2018 BAMF_2411 d236373c3b3d60c5ae21fda410bba6b7 297 Pfam PF01261 Xylose isomerase-like TIM barrel 21 237 4.2E-39 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain BAMF_2411 d236373c3b3d60c5ae21fda410bba6b7 297 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 213 229 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BAMF_2411 d236373c3b3d60c5ae21fda410bba6b7 297 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 285 42.355 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BAMF_2411 d236373c3b3d60c5ae21fda410bba6b7 297 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 282 1.6E-104 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BAMF_2411 d236373c3b3d60c5ae21fda410bba6b7 297 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BAMF_2411 d236373c3b3d60c5ae21fda410bba6b7 297 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BAMF_0476 221f533a4db6c930ca7230dbfb174da1 348 SUPERFAMILY SSF102114 104 303 2.45E-9 T 12-10-2018 BAMF_0476 221f533a4db6c930ca7230dbfb174da1 348 Gene3D G3DSA:1.10.150.530 5 57 1.9E-6 T 12-10-2018 BAMF_0476 221f533a4db6c930ca7230dbfb174da1 348 TIGRFAM TIGR04432 rSAM_Cfr: 23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr 3 342 6.8E-193 T 12-10-2018 IPR022881 Ribosomal RNA large subunit methyltransferase, Cfr GO:0070475 MetaCyc: PWY-6828 BAMF_0476 221f533a4db6c930ca7230dbfb174da1 348 PIRSF PIRSF006004 4 348 5.4E-96 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 BAMF_0476 221f533a4db6c930ca7230dbfb174da1 348 Pfam PF04055 Radical SAM superfamily 105 262 6.5E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BAMF_0476 221f533a4db6c930ca7230dbfb174da1 348 Hamap MF_01873 Ribosomal RNA large subunit methyltransferase Cfr [cfr]. 1 345 61.606 T 12-10-2018 IPR022881 Ribosomal RNA large subunit methyltransferase, Cfr GO:0070475 MetaCyc: PWY-6828 BAMF_0476 221f533a4db6c930ca7230dbfb174da1 348 Gene3D G3DSA:3.20.20.70 62 329 6.3E-82 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_3781 c4884ff43cde9ec036dee2616c62b469 289 Gene3D G3DSA:3.20.20.150 1 285 2.2E-46 T 12-10-2018 BAMF_3781 c4884ff43cde9ec036dee2616c62b469 289 Pfam PF01261 Xylose isomerase-like TIM barrel 23 241 1.7E-38 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain BAMF_3781 c4884ff43cde9ec036dee2616c62b469 289 SUPERFAMILY SSF51658 1 286 3.01E-54 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily BAMF_1466 8757320f61b455e34f5adb90cbd68734 698 Pfam PF02378 Phosphotransferase system, EIIC 14 354 3.1E-99 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BAMF_1466 8757320f61b455e34f5adb90cbd68734 698 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 515 5.0E-249 T 12-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 BAMF_1466 8757320f61b455e34f5adb90cbd68734 698 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 613 625 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BAMF_1466 8757320f61b455e34f5adb90cbd68734 698 SUPERFAMILY SSF51261 545 691 1.41E-52 T 12-10-2018 IPR011055 Duplicated hybrid motif BAMF_1466 8757320f61b455e34f5adb90cbd68734 698 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 551 672 1.6E-48 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BAMF_1466 8757320f61b455e34f5adb90cbd68734 698 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 64 365 1.1E-99 T 12-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 BAMF_1466 8757320f61b455e34f5adb90cbd68734 698 SUPERFAMILY SSF55604 442 512 3.01E-19 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BAMF_1466 8757320f61b455e34f5adb90cbd68734 698 Gene3D G3DSA:3.30.1360.60 438 516 1.4E-27 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BAMF_1466 8757320f61b455e34f5adb90cbd68734 698 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 413 499 1.2E-26 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BAMF_1466 8757320f61b455e34f5adb90cbd68734 698 Pfam PF00367 phosphotransferase system, EIIB 443 475 1.6E-13 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BAMF_1466 8757320f61b455e34f5adb90cbd68734 698 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 453 470 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BAMF_1466 8757320f61b455e34f5adb90cbd68734 698 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 552 671 2.9E-46 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BAMF_1466 8757320f61b455e34f5adb90cbd68734 698 Gene3D G3DSA:2.70.70.10 537 698 2.7E-63 T 12-10-2018 IPR011055 Duplicated hybrid motif BAMF_3713 b2819084366cf7180e9488c64d6d6573 468 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 442 1.4E-169 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BAMF_3713 b2819084366cf7180e9488c64d6d6573 468 PIRSF PIRSF006446 1 468 9.6E-192 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BAMF_0969 304ecae9a696a1d6ebceefc86ffe781d 590 Pfam PF13667 ThiC-associated domain 17 93 3.1E-32 T 12-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BAMF_0969 304ecae9a696a1d6ebceefc86ffe781d 590 Pfam PF01964 Radical SAM ThiC family 133 553 1.3E-205 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BAMF_0969 304ecae9a696a1d6ebceefc86ffe781d 590 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 132 556 4.4E-227 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BAMF_0969 304ecae9a696a1d6ebceefc86ffe781d 590 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 132 558 100.424 T 12-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BAMF_0969 304ecae9a696a1d6ebceefc86ffe781d 590 Gene3D G3DSA:3.20.20.540 176 489 1.9E-157 T 12-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 8 445 2.0E-190 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 Pfam PF11638 DnaA N-terminal domain 7 66 2.0E-18 T 12-10-2018 IPR024633 DnaA N-terminal domain BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 SMART SM00382 143 271 1.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 Gene3D G3DSA:1.10.1750.10 346 446 6.9E-36 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 144 164 7.8E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 176 190 7.8E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 242 269 7.8E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 405 424 7.8E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 208 222 7.8E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 Pfam PF00308 Bacterial dnaA protein 111 327 1.4E-107 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 ProSitePatterns PS01008 DnaA protein signature. 405 424 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 Gene3D G3DSA:3.40.50.300 93 275 3.2E-55 T 12-10-2018 BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 SMART SM00760 355 424 4.7E-42 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 SUPERFAMILY SSF48295 342 446 1.86E-36 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 SUPERFAMILY SSF52540 111 323 4.07E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 Gene3D G3DSA:3.30.300.180 1 82 2.1E-33 T 12-10-2018 IPR038454 DnaA, N-terminal domain superfamily BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 356 424 6.2E-31 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 Gene3D G3DSA:1.10.8.60 277 345 3.2E-30 T 12-10-2018 BAMF_0001 74ff51bf2d26094ad902499d06dc1b8c 446 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 446 35.319 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BAMF_1712 6d00a6fe14fc86277db33928a8d72aad 363 Gene3D G3DSA:3.40.50.300 167 351 7.9E-82 T 12-10-2018 BAMF_1712 6d00a6fe14fc86277db33928a8d72aad 363 Pfam PF00448 SRP54-type protein, GTPase domain 173 362 5.3E-45 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BAMF_1712 6d00a6fe14fc86277db33928a8d72aad 363 SUPERFAMILY SSF52540 173 362 7.01E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1712 6d00a6fe14fc86277db33928a8d72aad 363 SMART SM00962 172 363 1.3E-50 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BAMF_1712 6d00a6fe14fc86277db33928a8d72aad 363 Gene3D G3DSA:1.20.120.1380 116 354 7.9E-82 T 12-10-2018 BAMF_1712 6d00a6fe14fc86277db33928a8d72aad 363 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 259 7.9E-59 T 12-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 BAMF_3217 2fe4a0d2dee7119c2fcf8d6128632748 246 Pfam PF12146 Serine aminopeptidase, S33 16 229 1.8E-18 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 BAMF_3217 2fe4a0d2dee7119c2fcf8d6128632748 246 Gene3D G3DSA:3.40.50.1820 1 246 3.6E-62 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_3217 2fe4a0d2dee7119c2fcf8d6128632748 246 SUPERFAMILY SSF53474 11 245 6.31E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_3217 2fe4a0d2dee7119c2fcf8d6128632748 246 PIRSF PIRSF017388 1 246 1.5E-99 T 12-10-2018 IPR012354 Esterase/lipase GO:0052689 BAMF_1579 4ba6577a985a2b5b5e501cd3d6420ec9 340 SUPERFAMILY SSF54211 212 332 2.77E-22 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_1579 4ba6577a985a2b5b5e501cd3d6420ec9 340 Pfam PF13180 PDZ domain 127 194 1.4E-14 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_1579 4ba6577a985a2b5b5e501cd3d6420ec9 340 Gene3D G3DSA:3.30.230.10 204 340 5.3E-19 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BAMF_1579 4ba6577a985a2b5b5e501cd3d6420ec9 340 Gene3D G3DSA:2.30.42.10 127 203 1.1E-28 T 12-10-2018 BAMF_1579 4ba6577a985a2b5b5e501cd3d6420ec9 340 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 230 330 2.5E-12 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 BAMF_1579 4ba6577a985a2b5b5e501cd3d6420ec9 340 SUPERFAMILY SSF50156 127 212 2.8E-16 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BAMF_3791 9373fd06e4b7c4d2847c398d11ea4f3d 462 ProSitePatterns PS00217 Sugar transport proteins signature 2. 106 131 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_3791 9373fd06e4b7c4d2847c398d11ea4f3d 462 ProSitePatterns PS00216 Sugar transport proteins signature 1. 64 81 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_3791 9373fd06e4b7c4d2847c398d11ea4f3d 462 Pfam PF00083 Sugar (and other) transporter 13 439 1.0E-121 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BAMF_3791 9373fd06e4b7c4d2847c398d11ea4f3d 462 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 5 437 4.8E-116 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3791 9373fd06e4b7c4d2847c398d11ea4f3d 462 PRINTS PR00171 Sugar transporter signature 101 120 6.3E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3791 9373fd06e4b7c4d2847c398d11ea4f3d 462 PRINTS PR00171 Sugar transporter signature 253 263 6.3E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3791 9373fd06e4b7c4d2847c398d11ea4f3d 462 PRINTS PR00171 Sugar transporter signature 365 377 6.3E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3791 9373fd06e4b7c4d2847c398d11ea4f3d 462 PRINTS PR00171 Sugar transporter signature 18 28 6.3E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3791 9373fd06e4b7c4d2847c398d11ea4f3d 462 PRINTS PR00171 Sugar transporter signature 342 363 6.3E-27 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3791 9373fd06e4b7c4d2847c398d11ea4f3d 462 ProSitePatterns PS00216 Sugar transport proteins signature 1. 297 314 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_3791 9373fd06e4b7c4d2847c398d11ea4f3d 462 SUPERFAMILY SSF103473 5 438 2.62E-82 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3791 9373fd06e4b7c4d2847c398d11ea4f3d 462 Gene3D G3DSA:1.20.1250.20 2 445 2.3E-136 T 12-10-2018 BAMF_2198 67af920f84f7f9c61581f079f3bfa950 194 Gene3D G3DSA:3.30.70.1950 104 194 4.5E-32 T 12-10-2018 IPR038471 MecA, C-terminal domain superfamily BAMF_2198 67af920f84f7f9c61581f079f3bfa950 194 PIRSF PIRSF029008 1 194 3.0E-62 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA BAMF_2198 67af920f84f7f9c61581f079f3bfa950 194 Hamap MF_01124 Adapter protein MecA [mecA]. 1 193 24.531 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA BAMF_2198 67af920f84f7f9c61581f079f3bfa950 194 Pfam PF05389 Negative regulator of genetic competence (MecA) 101 189 6.1E-13 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA BAMF_2198 67af920f84f7f9c61581f079f3bfa950 194 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 89 1.3E-25 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA BAMF_3810 d31c3c769b8422fab6991ee0e0022e11 161 Gene3D G3DSA:3.20.80.10 2 161 7.8E-16 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BAMF_3810 d31c3c769b8422fab6991ee0e0022e11 161 Pfam PF14526 Integron-associated effector binding protein 5 158 2.6E-30 T 12-10-2018 IPR029441 Integron-associated effector binding protein BAMF_3710 c0ee594c89ea68e6e80fc2994aa03297 576 Pfam PF00005 ABC transporter 353 500 4.4E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3710 c0ee594c89ea68e6e80fc2994aa03297 576 Gene3D G3DSA:3.40.50.300 328 572 9.6E-77 T 12-10-2018 BAMF_3710 c0ee594c89ea68e6e80fc2994aa03297 576 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3710 c0ee594c89ea68e6e80fc2994aa03297 576 Gene3D G3DSA:1.20.1560.10 5 314 9.9E-25 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_3710 c0ee594c89ea68e6e80fc2994aa03297 576 Pfam PF00664 ABC transporter transmembrane region 18 277 4.9E-9 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BAMF_3710 c0ee594c89ea68e6e80fc2994aa03297 576 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 5 531 1.9E-177 T 12-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 BAMF_3710 c0ee594c89ea68e6e80fc2994aa03297 576 SMART SM00382 362 547 9.3E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3710 c0ee594c89ea68e6e80fc2994aa03297 576 SUPERFAMILY SSF90123 3 490 1.57E-40 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_3710 c0ee594c89ea68e6e80fc2994aa03297 576 SUPERFAMILY SSF52540 331 570 1.36E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2919 ed124ea90b52415307e88e7cc9762f24 174 SUPERFAMILY SSF52317 5 173 1.15E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_2919 ed124ea90b52415307e88e7cc9762f24 174 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 7 171 1.2E-48 T 12-10-2018 IPR006286 Deglycase PfpI BAMF_2919 ed124ea90b52415307e88e7cc9762f24 174 Pfam PF01965 DJ-1/PfpI family 6 168 1.6E-45 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BAMF_2919 ed124ea90b52415307e88e7cc9762f24 174 Gene3D G3DSA:3.40.50.880 2 174 1.7E-49 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_2088 431932f7ba0fd11d9b4ef43652ae9518 377 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 6 83 2.5E-18 T 12-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal BAMF_2088 431932f7ba0fd11d9b4ef43652ae9518 377 Pfam PF13769 Virulence factor 108 187 4.1E-30 T 12-10-2018 IPR025989 Virulence factor domain BAMF_2088 431932f7ba0fd11d9b4ef43652ae9518 377 Pfam PF13646 HEAT repeats 270 343 6.3E-12 T 12-10-2018 BAMF_2088 431932f7ba0fd11d9b4ef43652ae9518 377 SMART SM00567 E-Z type HEAT repeats 279 308 0.049 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 BAMF_2088 431932f7ba0fd11d9b4ef43652ae9518 377 SMART SM00567 E-Z type HEAT repeats 219 246 1000.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 BAMF_2088 431932f7ba0fd11d9b4ef43652ae9518 377 SMART SM00567 E-Z type HEAT repeats 248 277 0.028 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 BAMF_2088 431932f7ba0fd11d9b4ef43652ae9518 377 SMART SM00567 E-Z type HEAT repeats 310 339 3.0E-4 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 BAMF_2088 431932f7ba0fd11d9b4ef43652ae9518 377 SMART SM00932 4 90 3.2E-27 T 12-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal BAMF_2088 431932f7ba0fd11d9b4ef43652ae9518 377 SUPERFAMILY SSF48371 202 373 4.97E-34 T 12-10-2018 IPR016024 Armadillo-type fold BAMF_2088 431932f7ba0fd11d9b4ef43652ae9518 377 SUPERFAMILY SSF110836 1 84 5.89E-22 T 12-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily BAMF_2088 431932f7ba0fd11d9b4ef43652ae9518 377 Gene3D G3DSA:1.25.10.10 223 372 2.2E-27 T 12-10-2018 IPR011989 Armadillo-like helical BAMF_2088 431932f7ba0fd11d9b4ef43652ae9518 377 Gene3D G3DSA:3.30.1370.70 1 92 2.3E-27 T 12-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily BAMF_3860 b76a92b8b51da01de7f91e601141f4b1 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 427 8.2E-202 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BAMF_3860 b76a92b8b51da01de7f91e601141f4b1 430 SMART SM00788 3 422 9.5E-292 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BAMF_3860 b76a92b8b51da01de7f91e601141f4b1 430 Gene3D G3DSA:3.40.440.10 5 252 1.9E-104 T 12-10-2018 BAMF_3860 b76a92b8b51da01de7f91e601141f4b1 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 12-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BAMF_3860 b76a92b8b51da01de7f91e601141f4b1 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 212.093 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BAMF_3860 b76a92b8b51da01de7f91e601141f4b1 430 Gene3D G3DSA:1.10.300.10 100 199 1.9E-104 T 12-10-2018 BAMF_3860 b76a92b8b51da01de7f91e601141f4b1 430 Pfam PF00709 Adenylosuccinate synthetase 4 420 1.3E-184 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BAMF_3860 b76a92b8b51da01de7f91e601141f4b1 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 12-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BAMF_3860 b76a92b8b51da01de7f91e601141f4b1 430 Gene3D G3DSA:3.90.170.10 265 429 5.0E-71 T 12-10-2018 BAMF_3860 b76a92b8b51da01de7f91e601141f4b1 430 SUPERFAMILY SSF52540 1 427 1.17E-174 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2978 997258cafadfbe678796fa4d2f50f6bd 73 Pfam PF10676 Spore germination protein gerPA/gerPF 1 72 1.3E-23 T 12-10-2018 IPR019618 Spore germination protein GerPA/GerPF BAMF_3357 c11b6ce4d2624089b8afbaff14f8a9f9 78 Pfam PF09964 Uncharacterized protein conserved in bacteria (DUF2198) 4 75 9.8E-30 T 12-10-2018 IPR019242 Protein of unknown function DUF2198 BAMF_2119 1c8bda2078495e15f8a15616d59d7cd1 182 PIRSF PIRSF021290 1 179 2.8E-70 T 12-10-2018 IPR010697 Protein of unknown function DUF1273 BAMF_2119 1c8bda2078495e15f8a15616d59d7cd1 182 Pfam PF06908 Protein of unknown function (DUF1273) 4 171 5.8E-70 T 12-10-2018 IPR010697 Protein of unknown function DUF1273 BAMF_2119 1c8bda2078495e15f8a15616d59d7cd1 182 SUPERFAMILY SSF102405 1 177 2.93E-62 T 12-10-2018 BAMF_2119 1c8bda2078495e15f8a15616d59d7cd1 182 Hamap MF_01575 UPF0398 protein . 1 177 35.409 T 12-10-2018 IPR010697 Protein of unknown function DUF1273 BAMF_2119 1c8bda2078495e15f8a15616d59d7cd1 182 Gene3D G3DSA:3.40.50.450 1 180 1.7E-68 T 12-10-2018 BAMF_3201 d8d77502c8e1898676914e82d5a91ca2 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 240 1.2E-15 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 BAMF_3201 d8d77502c8e1898676914e82d5a91ca2 346 SUPERFAMILY SSF51735 2 201 1.38E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3201 d8d77502c8e1898676914e82d5a91ca2 346 Gene3D G3DSA:3.30.360.10 122 339 3.2E-132 T 12-10-2018 BAMF_3201 d8d77502c8e1898676914e82d5a91ca2 346 Gene3D G3DSA:3.40.50.720 6 316 3.2E-132 T 12-10-2018 BAMF_3201 d8d77502c8e1898676914e82d5a91ca2 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 1.9E-22 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BAMF_0192 97032e825f9887b8da626abb23d6994a 237 SUPERFAMILY SSF56784 4 227 2.14E-44 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_0192 97032e825f9887b8da626abb23d6994a 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 199 1.1E-19 T 12-10-2018 BAMF_0192 97032e825f9887b8da626abb23d6994a 237 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 227 1.7E-86 T 12-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 BAMF_0192 97032e825f9887b8da626abb23d6994a 237 Gene3D G3DSA:1.10.150.240 17 100 2.7E-79 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BAMF_0192 97032e825f9887b8da626abb23d6994a 237 Gene3D G3DSA:3.40.50.1000 6 223 2.7E-79 T 12-10-2018 IPR023214 HAD superfamily BAMF_0192 97032e825f9887b8da626abb23d6994a 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 194 4.5E-13 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_1297 77dea79aba40080881ce1ad27a8d8cc1 253 SMART SM01134 74 233 8.9E-62 T 12-10-2018 BAMF_1297 77dea79aba40080881ce1ad27a8d8cc1 253 Gene3D G3DSA:1.10.10.10 1 63 1.7E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1297 77dea79aba40080881ce1ad27a8d8cc1 253 Pfam PF00455 DeoR C terminal sensor domain 76 231 8.1E-46 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain BAMF_1297 77dea79aba40080881ce1ad27a8d8cc1 253 SMART SM00420 6 58 4.0E-20 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_1297 77dea79aba40080881ce1ad27a8d8cc1 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BAMF_1297 77dea79aba40080881ce1ad27a8d8cc1 253 SUPERFAMILY SSF46785 4 70 5.88E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1297 77dea79aba40080881ce1ad27a8d8cc1 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 5.2E-19 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_1297 77dea79aba40080881ce1ad27a8d8cc1 253 SUPERFAMILY SSF100950 76 232 1.47E-28 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BAMF_1297 77dea79aba40080881ce1ad27a8d8cc1 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.2E-10 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_1297 77dea79aba40080881ce1ad27a8d8cc1 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.2E-10 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_0027 7893acf15fc9533228ddd33445bd7545 477 Gene3D G3DSA:3.90.105.10 410 466 8.8E-18 T 12-10-2018 BAMF_0027 7893acf15fc9533228ddd33445bd7545 477 Gene3D G3DSA:3.90.1150.150 276 360 1.1E-110 T 12-10-2018 BAMF_0027 7893acf15fc9533228ddd33445bd7545 477 Gene3D G3DSA:3.40.640.10 45 275 1.1E-110 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_0027 7893acf15fc9533228ddd33445bd7545 477 SUPERFAMILY SSF55904 334 467 1.01E-19 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 BAMF_0027 7893acf15fc9533228ddd33445bd7545 477 SUPERFAMILY SSF53383 3 357 1.5E-81 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_0027 7893acf15fc9533228ddd33445bd7545 477 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 3 306 2.6E-95 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BAMF_0027 7893acf15fc9533228ddd33445bd7545 477 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 313 360 1.7E-6 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BAMF_0027 7893acf15fc9533228ddd33445bd7545 477 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 402 461 1.6E-8 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 BAMF_2659 c275ec1059e9eea78fc751d00c56c225 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 257 1.3E-61 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BAMF_2659 c275ec1059e9eea78fc751d00c56c225 259 SUPERFAMILY SSF52096 3 258 1.23E-81 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_2659 c275ec1059e9eea78fc751d00c56c225 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BAMF_2659 c275ec1059e9eea78fc751d00c56c225 259 Gene3D G3DSA:3.90.226.10 1 258 1.1E-86 T 12-10-2018 BAMF_0222 1a919a0cc0b1e7055b49b9e32975281e 173 Gene3D G3DSA:3.40.710.10 55 173 2.0E-79 T 12-10-2018 BAMF_0222 1a919a0cc0b1e7055b49b9e32975281e 173 Pfam PF04960 Glutaminase 3 173 9.6E-60 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BAMF_0222 1a919a0cc0b1e7055b49b9e32975281e 173 Gene3D G3DSA:1.10.1500.10 1 54 2.0E-79 T 12-10-2018 BAMF_0222 1a919a0cc0b1e7055b49b9e32975281e 173 SUPERFAMILY SSF56601 1 173 3.38E-65 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_2601 ed4981bffc05ed9f891a513373bd97e7 98 Pfam PF04327 Cysteine protease Prp 2 91 4.0E-20 T 12-10-2018 IPR007422 Cysteine protease Prp BAMF_2601 ed4981bffc05ed9f891a513373bd97e7 98 Gene3D G3DSA:3.30.70.1490 1 97 7.3E-28 T 12-10-2018 IPR036764 Cysteine protease Prp superfamily BAMF_2601 ed4981bffc05ed9f891a513373bd97e7 98 SUPERFAMILY SSF118010 2 94 8.89E-26 T 12-10-2018 IPR036764 Cysteine protease Prp superfamily BAMF_2806 5442301df53d6f2a62e91dd2315e9969 60 Pfam PF10957 Sporulation protein Cse60 1 60 5.6E-35 T 12-10-2018 IPR020296 Sporulation protein Cse60 BAMF_2806 5442301df53d6f2a62e91dd2315e9969 60 ProDom PD052690 CSE60 CYTOSOLIC YTEV LJ928 SPORULATION ORF85 PROPHAGE 1 59 5.0E-27 T 12-10-2018 IPR020296 Sporulation protein Cse60 BAMF_1655 a94f6ed2965f459e4b7471ad938021fd 120 Pfam PF03780 Asp23 family, cell envelope-related function 9 116 6.1E-36 T 12-10-2018 IPR005531 Alkaline shock protein Asp23 BAMF_0423 055243e7948f09106ee95a8a43a061f7 436 Gene3D G3DSA:1.10.3860.10 19 434 2.0E-129 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BAMF_0423 055243e7948f09106ee95a8a43a061f7 436 Pfam PF00375 Sodium:dicarboxylate symporter family 25 415 9.6E-118 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BAMF_0423 055243e7948f09106ee95a8a43a061f7 436 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 52 67 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BAMF_0423 055243e7948f09106ee95a8a43a061f7 436 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 310 333 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BAMF_0423 055243e7948f09106ee95a8a43a061f7 436 SUPERFAMILY SSF118215 25 417 7.59E-123 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BAMF_0423 055243e7948f09106ee95a8a43a061f7 436 PRINTS PR00173 Glutamate-aspartate symporter signature 90 115 7.2E-32 T 12-10-2018 BAMF_0423 055243e7948f09106ee95a8a43a061f7 436 PRINTS PR00173 Glutamate-aspartate symporter signature 23 43 7.2E-32 T 12-10-2018 BAMF_0423 055243e7948f09106ee95a8a43a061f7 436 PRINTS PR00173 Glutamate-aspartate symporter signature 307 333 7.2E-32 T 12-10-2018 BAMF_0423 055243e7948f09106ee95a8a43a061f7 436 PRINTS PR00173 Glutamate-aspartate symporter signature 342 361 7.2E-32 T 12-10-2018 BAMF_0423 055243e7948f09106ee95a8a43a061f7 436 PRINTS PR00173 Glutamate-aspartate symporter signature 160 182 7.2E-32 T 12-10-2018 BAMF_0423 055243e7948f09106ee95a8a43a061f7 436 PRINTS PR00173 Glutamate-aspartate symporter signature 234 253 7.2E-32 T 12-10-2018 BAMF_3520 fd34697eee8ca3ecb1d7d342103afe1d 502 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 1.6E-73 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_3520 fd34697eee8ca3ecb1d7d342103afe1d 502 SUPERFAMILY SSF52540 95 370 3.29E-98 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3520 fd34697eee8ca3ecb1d7d342103afe1d 502 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 499 1.1E-264 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3520 fd34697eee8ca3ecb1d7d342103afe1d 502 Gene3D G3DSA:1.20.150.20 372 499 2.6E-52 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3520 fd34697eee8ca3ecb1d7d342103afe1d 502 Gene3D G3DSA:3.40.50.300 94 371 6.1E-128 T 12-10-2018 BAMF_3520 fd34697eee8ca3ecb1d7d342103afe1d 502 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_3520 fd34697eee8ca3ecb1d7d342103afe1d 502 SUPERFAMILY SSF47917 372 499 2.62E-48 T 12-10-2018 BAMF_3520 fd34697eee8ca3ecb1d7d342103afe1d 502 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 51.607 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3520 fd34697eee8ca3ecb1d7d342103afe1d 502 PIRSF PIRSF039088 1 501 9.1E-252 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3520 fd34697eee8ca3ecb1d7d342103afe1d 502 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 491 1.9E-47 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_3520 fd34697eee8ca3ecb1d7d342103afe1d 502 SUPERFAMILY SSF50615 10 94 1.31E-31 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_3520 fd34697eee8ca3ecb1d7d342103afe1d 502 Gene3D G3DSA:2.40.30.20 1 93 4.9E-38 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_3520 fd34697eee8ca3ecb1d7d342103afe1d 502 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 1.3E-20 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_0494 902ec392193d1da95c37dbf5bfb83f1a 240 SUPERFAMILY SSF52317 28 238 6.73E-37 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_0494 902ec392193d1da95c37dbf5bfb83f1a 240 Pfam PF07722 Peptidase C26 5 218 1.7E-67 T 12-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 BAMF_0494 902ec392193d1da95c37dbf5bfb83f1a 240 Gene3D G3DSA:3.40.50.880 1 240 4.1E-78 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_2287 229b1744fd4484fb394caac3f38770ee 422 Hamap MF_01113 DNA polymerase IV [dinB]. 13 365 38.374 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BAMF_2287 229b1744fd4484fb394caac3f38770ee 422 Gene3D G3DSA:3.30.70.270 16 176 3.1E-59 T 12-10-2018 BAMF_2287 229b1744fd4484fb394caac3f38770ee 422 Pfam PF11799 impB/mucB/samB family C-terminal domain 255 358 7.8E-18 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BAMF_2287 229b1744fd4484fb394caac3f38770ee 422 Gene3D G3DSA:1.10.150.20 188 241 1.7E-14 T 12-10-2018 BAMF_2287 229b1744fd4484fb394caac3f38770ee 422 Pfam PF00817 impB/mucB/samB family 19 166 2.1E-51 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BAMF_2287 229b1744fd4484fb394caac3f38770ee 422 Gene3D G3DSA:2.30.40.20 33 86 3.1E-59 T 12-10-2018 BAMF_2287 229b1744fd4484fb394caac3f38770ee 422 SUPERFAMILY SSF100879 253 350 8.83E-25 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BAMF_2287 229b1744fd4484fb394caac3f38770ee 422 Gene3D G3DSA:3.30.1490.100 255 362 1.3E-24 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BAMF_2287 229b1744fd4484fb394caac3f38770ee 422 Pfam PF11798 IMS family HHH motif 180 209 4.1E-8 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BAMF_2287 229b1744fd4484fb394caac3f38770ee 422 SUPERFAMILY SSF56672 12 246 8.27E-84 T 12-10-2018 BAMF_2287 229b1744fd4484fb394caac3f38770ee 422 PIRSF PIRSF036603 132 422 4.5E-18 T 12-10-2018 BAMF_2287 229b1744fd4484fb394caac3f38770ee 422 PIRSF PIRSF036603 9 144 7.2E-27 T 12-10-2018 BAMF_0369 09913d2ab7b56d0930f5ec8b8daca0c1 131 Pfam PF07977 FabA-like domain 6 123 1.7E-9 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BAMF_0369 09913d2ab7b56d0930f5ec8b8daca0c1 131 Gene3D G3DSA:3.10.129.10 2 130 2.6E-29 T 12-10-2018 BAMF_0369 09913d2ab7b56d0930f5ec8b8daca0c1 131 SUPERFAMILY SSF54637 4 128 2.96E-27 T 12-10-2018 IPR029069 HotDog domain superfamily BAMF_2572 a8efb8d3c2fd25b730dbe8f6d866825c 785 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 566 768 1.3E-65 T 12-10-2018 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal BAMF_2572 a8efb8d3c2fd25b730dbe8f6d866825c 785 Gene3D G3DSA:3.10.310.30 319 442 7.5E-36 T 12-10-2018 BAMF_2572 a8efb8d3c2fd25b730dbe8f6d866825c 785 Pfam PF01368 DHH family 83 225 3.6E-11 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BAMF_2572 a8efb8d3c2fd25b730dbe8f6d866825c 785 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 28 559 4.0E-182 T 12-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 BAMF_2572 a8efb8d3c2fd25b730dbe8f6d866825c 785 Gene3D G3DSA:3.90.1640.30 57 318 1.1E-95 T 12-10-2018 BAMF_2572 a8efb8d3c2fd25b730dbe8f6d866825c 785 Pfam PF02272 DHHA1 domain 315 437 7.2E-21 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BAMF_2572 a8efb8d3c2fd25b730dbe8f6d866825c 785 SUPERFAMILY SSF64182 57 450 3.14E-123 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily BAMF_2396 055b52532d7404df0c42094e0df77aeb 294 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 8 286 2.4E-77 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 BAMF_2396 055b52532d7404df0c42094e0df77aeb 294 Gene3D G3DSA:1.10.3720.10 58 289 2.7E-33 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2396 055b52532d7404df0c42094e0df77aeb 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 292 2.9E-51 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_2396 055b52532d7404df0c42094e0df77aeb 294 SUPERFAMILY SSF161098 17 278 1.12E-39 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1606 45ef1ce95fa852c4a88bb867c9eb9360 426 Pfam PF07687 Peptidase dimerisation domain 186 305 1.3E-24 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain BAMF_1606 45ef1ce95fa852c4a88bb867c9eb9360 426 Pfam PF01546 Peptidase family M20/M25/M40 84 415 5.6E-32 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BAMF_1606 45ef1ce95fa852c4a88bb867c9eb9360 426 SUPERFAMILY SSF55031 213 303 2.39E-8 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BAMF_1606 45ef1ce95fa852c4a88bb867c9eb9360 426 Gene3D G3DSA:3.40.630.10 35 418 9.1E-94 T 12-10-2018 BAMF_1606 45ef1ce95fa852c4a88bb867c9eb9360 426 Gene3D G3DSA:3.30.70.360 189 323 9.1E-94 T 12-10-2018 BAMF_1606 45ef1ce95fa852c4a88bb867c9eb9360 426 SUPERFAMILY SSF53187 7 419 3.71E-61 T 12-10-2018 BAMF_1606 45ef1ce95fa852c4a88bb867c9eb9360 426 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 19 409 3.4E-126 T 12-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase BAMF_2226 755396fc7710bcc69b8da6bdd205ae4d 215 Pfam PF00677 Lumazine binding domain 99 183 1.4E-21 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BAMF_2226 755396fc7710bcc69b8da6bdd205ae4d 215 Pfam PF00677 Lumazine binding domain 3 86 1.9E-25 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BAMF_2226 755396fc7710bcc69b8da6bdd205ae4d 215 Gene3D G3DSA:2.40.30.20 1 88 1.9E-31 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_2226 755396fc7710bcc69b8da6bdd205ae4d 215 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 2.1E-83 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BAMF_2226 755396fc7710bcc69b8da6bdd205ae4d 215 SUPERFAMILY SSF63380 1 89 9.35E-28 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BAMF_2226 755396fc7710bcc69b8da6bdd205ae4d 215 SUPERFAMILY SSF63380 92 195 3.15E-31 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BAMF_2226 755396fc7710bcc69b8da6bdd205ae4d 215 Gene3D G3DSA:2.40.30.20 101 204 4.9E-32 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BAMF_2226 755396fc7710bcc69b8da6bdd205ae4d 215 PIRSF PIRSF000498 1 210 2.0E-79 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BAMF_2543 761eebfcd27f7f3244b6a9350b8fe770 309 Pfam PF01136 Peptidase family U32 75 306 9.0E-68 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 369 1.2E-9 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 SUPERFAMILY SSF103190 40 168 1.18E-30 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 Gene3D G3DSA:3.30.450.20 32 168 1.3E-34 T 12-10-2018 BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 SUPERFAMILY SSF55785 212 307 3.81E-6 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 2.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 2.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 2.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 SUPERFAMILY SSF55874 398 528 2.23E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 SMART SM00091 213 278 1.0E-4 T 12-10-2018 IPR000014 PAS domain BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 Pfam PF13596 PAS domain 219 310 8.5E-5 T 12-10-2018 BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 SUPERFAMILY SSF55890 320 376 1.57E-11 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 Gene3D G3DSA:3.30.565.10 370 535 1.5E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 SMART SM00387 417 528 5.1E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 Gene3D G3DSA:3.30.450.20 200 312 5.5E-24 T 12-10-2018 BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 526 3.9E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0421 cdca8e64f6d9f20510e7308347b16c48 540 Pfam PF17203 Single cache domain 3 40 163 7.5E-18 T 12-10-2018 IPR033463 Single cache domain 3 BAMF_0293 7049442a37c66c024c71552a22d0e788 325 Gene3D G3DSA:3.20.20.530 39 325 2.7E-88 T 12-10-2018 BAMF_0293 7049442a37c66c024c71552a22d0e788 325 PIRSF PIRSF000196 21 325 5.0E-125 T 12-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 BAMF_0293 7049442a37c66c024c71552a22d0e788 325 SUPERFAMILY SSF51730 58 320 1.84E-72 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like BAMF_0293 7049442a37c66c024c71552a22d0e788 325 Pfam PF01619 Proline dehydrogenase 65 314 6.2E-36 T 12-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 BAMF_2759 de136f61aff7d40341d34382cb945b3a 396 SUPERFAMILY SSF46458 1 144 3.82E-42 T 12-10-2018 IPR009050 Globin-like superfamily BAMF_2759 de136f61aff7d40341d34382cb945b3a 396 SUPERFAMILY SSF52343 255 389 1.57E-33 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BAMF_2759 de136f61aff7d40341d34382cb945b3a 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 371 1.7E-18 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BAMF_2759 de136f61aff7d40341d34382cb945b3a 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 395 53.836 T 12-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 BAMF_2759 de136f61aff7d40341d34382cb945b3a 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 5.7E-10 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BAMF_2759 de136f61aff7d40341d34382cb945b3a 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 357 365 5.7E-10 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BAMF_2759 de136f61aff7d40341d34382cb945b3a 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 5.7E-10 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BAMF_2759 de136f61aff7d40341d34382cb945b3a 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 5.7E-10 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BAMF_2759 de136f61aff7d40341d34382cb945b3a 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 288 297 5.7E-10 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BAMF_2759 de136f61aff7d40341d34382cb945b3a 396 Pfam PF00970 Oxidoreductase FAD-binding domain 157 252 4.9E-10 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BAMF_2759 de136f61aff7d40341d34382cb945b3a 396 Gene3D G3DSA:1.10.490.10 1 145 3.9E-58 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 BAMF_2759 de136f61aff7d40341d34382cb945b3a 396 SUPERFAMILY SSF63380 151 254 9.5E-27 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BAMF_2759 de136f61aff7d40341d34382cb945b3a 396 Gene3D G3DSA:3.40.50.80 254 396 3.7E-34 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BAMF_2759 de136f61aff7d40341d34382cb945b3a 396 Gene3D G3DSA:2.40.30.10 152 253 3.3E-35 T 12-10-2018 BAMF_2759 de136f61aff7d40341d34382cb945b3a 396 Pfam PF00042 Globin 7 102 1.2E-10 T 12-10-2018 IPR000971 Globin GO:0020037 BAMF_3336 8c8a1f4469524a3dc48a2c66650a039c 194 Gene3D G3DSA:3.30.230.40 1 89 3.8E-35 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 BAMF_3336 8c8a1f4469524a3dc48a2c66650a039c 194 SUPERFAMILY SSF54211 87 178 6.2E-35 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_3336 8c8a1f4469524a3dc48a2c66650a039c 194 SUPERFAMILY SSF54211 1 86 1.9E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_3336 8c8a1f4469524a3dc48a2c66650a039c 194 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BAMF_3336 8c8a1f4469524a3dc48a2c66650a039c 194 Gene3D G3DSA:3.30.230.40 90 194 5.3E-40 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 BAMF_3336 8c8a1f4469524a3dc48a2c66650a039c 194 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BAMF_3336 8c8a1f4469524a3dc48a2c66650a039c 194 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 2.8E-63 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BAMF_3336 8c8a1f4469524a3dc48a2c66650a039c 194 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 194 41.641 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BAMF_2508 d9580ce8653a1688139d8316662ca98a 173 SUPERFAMILY SSF55729 42 150 1.83E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_2508 d9580ce8653a1688139d8316662ca98a 173 Gene3D G3DSA:3.40.630.30 1 173 7.3E-32 T 12-10-2018 BAMF_2508 d9580ce8653a1688139d8316662ca98a 173 PRINTS PR01754 Streptothricin acetyltransferase signature 138 154 3.3E-23 T 12-10-2018 IPR008125 Streptothricin acetyltransferase BAMF_2508 d9580ce8653a1688139d8316662ca98a 173 PRINTS PR01754 Streptothricin acetyltransferase signature 93 108 3.3E-23 T 12-10-2018 IPR008125 Streptothricin acetyltransferase BAMF_2508 d9580ce8653a1688139d8316662ca98a 173 PRINTS PR01754 Streptothricin acetyltransferase signature 117 132 3.3E-23 T 12-10-2018 IPR008125 Streptothricin acetyltransferase BAMF_2508 d9580ce8653a1688139d8316662ca98a 173 PRINTS PR01754 Streptothricin acetyltransferase signature 160 173 3.3E-23 T 12-10-2018 IPR008125 Streptothricin acetyltransferase BAMF_2508 d9580ce8653a1688139d8316662ca98a 173 Pfam PF00583 Acetyltransferase (GNAT) family 46 146 2.2E-16 T 12-10-2018 IPR000182 GNAT domain BAMF_0861 fa2feeee18d3d85b1d3755844de5182d 428 Pfam PF10651 Domain of unknown function (DUF2479) 3 146 2.9E-27 T 12-10-2018 IPR018913 Domain of unknown function DUF2479 BAMF_0861 fa2feeee18d3d85b1d3755844de5182d 428 SUPERFAMILY SSF58100 139 239 7.06E-5 T 12-10-2018 BAMF_0861 fa2feeee18d3d85b1d3755844de5182d 428 Gene3D G3DSA:2.60.40.3350 15 131 4.3E-5 T 12-10-2018 BAMF_0740 5a42501ca0c0d695f3181eece3d63579 645 PIRSF PIRSF005091 1 620 6.6E-187 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like BAMF_0740 5a42501ca0c0d695f3181eece3d63579 645 Pfam PF00884 Sulfatase 245 536 3.0E-45 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BAMF_0740 5a42501ca0c0d695f3181eece3d63579 645 Gene3D G3DSA:3.40.720.10 237 546 2.0E-83 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BAMF_0740 5a42501ca0c0d695f3181eece3d63579 645 SUPERFAMILY SSF53649 243 635 1.06E-76 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 Gene3D G3DSA:3.30.1370.10 551 622 1.1E-21 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 Pfam PF01138 3' exoribonuclease family, domain 1 324 457 3.1E-18 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 2.8E-20 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 PIRSF PIRSF005499 2 705 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 SUPERFAMILY SSF54211 293 488 1.16E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 SMART SM00322 553 618 1.8E-13 T 12-10-2018 IPR004087 K Homology domain GO:0003676 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 1.5E-16 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 Pfam PF03725 3' exoribonuclease family, domain 2 460 530 1.0E-7 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 Pfam PF00013 KH domain 557 615 2.8E-10 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 SUPERFAMILY SSF54211 7 144 2.83E-49 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 Gene3D G3DSA:3.30.230.70 1 230 3.0E-85 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 SUPERFAMILY SSF50249 621 703 2.29E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 31.182 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 SUPERFAMILY SSF55666 145 235 1.31E-31 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 SUPERFAMILY SSF55666 454 561 2.75E-28 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 SMART SM00316 621 691 1.3E-24 T 12-10-2018 IPR022967 RNA-binding domain, S1 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 Gene3D G3DSA:2.40.50.140 623 694 5.7E-26 T 12-10-2018 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 SUPERFAMILY SSF54791 556 641 6.83E-24 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 Pfam PF00575 S1 RNA binding domain 620 691 5.3E-19 T 12-10-2018 IPR003029 S1 domain GO:0003676 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 Gene3D G3DSA:3.30.230.70 235 550 9.0E-120 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BAMF_1741 5bd056779b5a0715313bc8f5570722c9 705 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 3.8E-19 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BAMF_3703 c40e7b031135b7c5a7a871966fbf26fb 293 ProSitePatterns PS01125 ROK family signature. 128 153 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BAMF_3703 c40e7b031135b7c5a7a871966fbf26fb 293 Pfam PF00480 ROK family 3 282 2.7E-73 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BAMF_3703 c40e7b031135b7c5a7a871966fbf26fb 293 Gene3D G3DSA:3.30.420.40 1 102 1.5E-31 T 12-10-2018 BAMF_3703 c40e7b031135b7c5a7a871966fbf26fb 293 SUPERFAMILY SSF53067 3 284 3.19E-46 T 12-10-2018 BAMF_3703 c40e7b031135b7c5a7a871966fbf26fb 293 Gene3D G3DSA:3.30.420.40 103 292 4.6E-71 T 12-10-2018 BAMF_2137 29707959ca606a2ca4318a77e5e34179 391 SUPERFAMILY SSF53383 2 389 8.38E-120 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_2137 29707959ca606a2ca4318a77e5e34179 391 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 232 245 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BAMF_2137 29707959ca606a2ca4318a77e5e34179 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 90 110 1.8E-16 T 12-10-2018 BAMF_2137 29707959ca606a2ca4318a77e5e34179 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 226 250 1.8E-16 T 12-10-2018 BAMF_2137 29707959ca606a2ca4318a77e5e34179 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 112 133 1.8E-16 T 12-10-2018 BAMF_2137 29707959ca606a2ca4318a77e5e34179 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 159 183 1.8E-16 T 12-10-2018 BAMF_2137 29707959ca606a2ca4318a77e5e34179 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 195 218 1.8E-16 T 12-10-2018 BAMF_2137 29707959ca606a2ca4318a77e5e34179 391 Gene3D G3DSA:3.40.640.10 60 282 2.8E-143 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_2137 29707959ca606a2ca4318a77e5e34179 391 Pfam PF00155 Aminotransferase class I and II 29 383 1.5E-80 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_2137 29707959ca606a2ca4318a77e5e34179 391 Gene3D G3DSA:3.90.1150.10 23 383 2.8E-143 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_2004 72ed5578ed4e3d701f3908b01888529a 281 Gene3D G3DSA:1.10.287.990 97 160 2.0E-23 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2004 72ed5578ed4e3d701f3908b01888529a 281 SUPERFAMILY SSF54719 159 274 1.7E-41 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2004 72ed5578ed4e3d701f3908b01888529a 281 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 167 269 1.4E-34 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2004 72ed5578ed4e3d701f3908b01888529a 281 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 236 243 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2004 72ed5578ed4e3d701f3908b01888529a 281 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 79 159 2.0E-26 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2004 72ed5578ed4e3d701f3908b01888529a 281 PRINTS PR01703 Manganese superoxide dismutase signature 83 94 7.8E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2004 72ed5578ed4e3d701f3908b01888529a 281 PRINTS PR01703 Manganese superoxide dismutase signature 196 204 7.8E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2004 72ed5578ed4e3d701f3908b01888529a 281 PRINTS PR01703 Manganese superoxide dismutase signature 143 156 7.8E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2004 72ed5578ed4e3d701f3908b01888529a 281 PRINTS PR01703 Manganese superoxide dismutase signature 234 246 7.8E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2004 72ed5578ed4e3d701f3908b01888529a 281 PRINTS PR01703 Manganese superoxide dismutase signature 104 117 7.8E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2004 72ed5578ed4e3d701f3908b01888529a 281 Gene3D G3DSA:2.40.500.20 161 280 2.7E-43 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2004 72ed5578ed4e3d701f3908b01888529a 281 SUPERFAMILY SSF46609 74 161 6.81E-31 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BAMF_2540 43f4af10a922eb624f7c37a50e0fd373 157 Gene3D G3DSA:3.10.50.30 79 157 3.3E-26 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 BAMF_2540 43f4af10a922eb624f7c37a50e0fd373 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 157 5.5E-27 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BAMF_2540 43f4af10a922eb624f7c37a50e0fd373 157 Gene3D G3DSA:1.10.287.180 5 78 2.2E-32 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BAMF_2540 43f4af10a922eb624f7c37a50e0fd373 157 SUPERFAMILY SSF54534 84 156 1.57E-21 T 12-10-2018 BAMF_2540 43f4af10a922eb624f7c37a50e0fd373 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BAMF_2540 43f4af10a922eb624f7c37a50e0fd373 157 SUPERFAMILY SSF46557 6 80 5.23E-28 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BAMF_2540 43f4af10a922eb624f7c37a50e0fd373 157 Pfam PF03449 Transcription elongation factor, N-terminal 8 77 2.4E-32 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BAMF_2540 43f4af10a922eb624f7c37a50e0fd373 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 122 138 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BAMF_2540 43f4af10a922eb624f7c37a50e0fd373 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 157 3.1E-59 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 BAMF_2540 43f4af10a922eb624f7c37a50e0fd373 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 157 33.702 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 BAMF_2540 43f4af10a922eb624f7c37a50e0fd373 157 PIRSF PIRSF006092 1 157 5.4E-52 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BAMF_2674 b879aca357dd70123f561c4dcdfa95a0 470 Gene3D G3DSA:3.30.70.2740 336 417 1.5E-14 T 12-10-2018 BAMF_2674 b879aca357dd70123f561c4dcdfa95a0 470 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 44 456 7.0E-189 T 12-10-2018 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 BAMF_2674 b879aca357dd70123f561c4dcdfa95a0 470 SUPERFAMILY SSF56176 6 217 1.73E-71 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BAMF_2674 b879aca357dd70123f561c4dcdfa95a0 470 Gene3D G3DSA:1.10.45.10 418 458 8.7E-12 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 BAMF_2674 b879aca357dd70123f561c4dcdfa95a0 470 SUPERFAMILY SSF55103 220 460 2.45E-66 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 BAMF_2674 b879aca357dd70123f561c4dcdfa95a0 470 Pfam PF01565 FAD binding domain 41 180 3.8E-42 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BAMF_2674 b879aca357dd70123f561c4dcdfa95a0 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 457 1.2E-74 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 BAMF_2674 b879aca357dd70123f561c4dcdfa95a0 470 Gene3D G3DSA:3.30.465.40 5 237 1.2E-77 T 12-10-2018 BAMF_2147 66b7d6ce1e27ac726ef12fcc89fdaf9f 237 SUPERFAMILY SSF102588 6 227 1.31E-54 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 BAMF_2147 66b7d6ce1e27ac726ef12fcc89fdaf9f 237 Gene3D G3DSA:3.40.50.10320 3 237 1.4E-82 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 BAMF_2147 66b7d6ce1e27ac726ef12fcc89fdaf9f 237 Pfam PF02585 GlcNAc-PI de-N-acetylase 8 124 1.7E-22 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 BAMF_2147 66b7d6ce1e27ac726ef12fcc89fdaf9f 237 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 5 225 8.8E-97 T 12-10-2018 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 BAMF_3420 ce27e75b9eb317ed61263cd0edb90d59 319 Gene3D G3DSA:3.10.450.290 25 91 9.3E-33 T 12-10-2018 BAMF_3420 ce27e75b9eb317ed61263cd0edb90d59 319 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 7 318 2.0E-81 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 BAMF_3420 ce27e75b9eb317ed61263cd0edb90d59 319 Gene3D G3DSA:3.30.300.210 222 319 5.8E-25 T 12-10-2018 IPR038501 Spore germination GerAC superfamily BAMF_3420 ce27e75b9eb317ed61263cd0edb90d59 319 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 204 318 7.5E-20 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 BAMF_3838 b37b74f58915c2ef7eeac1f3de2df410 387 SUPERFAMILY SSF50998 212 364 9.42E-6 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BAMF_3838 b37b74f58915c2ef7eeac1f3de2df410 387 Gene3D G3DSA:2.130.10.10 178 383 2.1E-6 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BAMF_0078 dbdd1c4af6dbc3da90ede079f632f3c6 120 TIGRFAM TIGR00526 folB_dom: FolB domain 1 119 2.3E-41 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BAMF_0078 dbdd1c4af6dbc3da90ede079f632f3c6 120 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 117 3.1E-46 T 12-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BAMF_0078 dbdd1c4af6dbc3da90ede079f632f3c6 120 SUPERFAMILY SSF55620 2 119 3.72E-41 T 12-10-2018 BAMF_0078 dbdd1c4af6dbc3da90ede079f632f3c6 120 Gene3D G3DSA:3.30.1130.10 1 120 1.9E-47 T 12-10-2018 BAMF_0078 dbdd1c4af6dbc3da90ede079f632f3c6 120 Pfam PF02152 Dihydroneopterin aldolase 4 116 5.0E-36 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BAMF_0078 dbdd1c4af6dbc3da90ede079f632f3c6 120 SMART SM00905 4 117 3.9E-53 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BAMF_3132 7f22341e8ae033a47db3b8d08333cb78 423 Pfam PF01555 DNA methylase 138 349 4.8E-43 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 BAMF_3132 7f22341e8ae033a47db3b8d08333cb78 423 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 322 336 5.8E-20 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 BAMF_3132 7f22341e8ae033a47db3b8d08333cb78 423 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 173 192 5.8E-20 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 BAMF_3132 7f22341e8ae033a47db3b8d08333cb78 423 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 138 150 5.8E-20 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 BAMF_3132 7f22341e8ae033a47db3b8d08333cb78 423 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 299 321 5.8E-20 T 12-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 BAMF_3132 7f22341e8ae033a47db3b8d08333cb78 423 SUPERFAMILY SSF53335 112 361 2.52E-55 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_3132 7f22341e8ae033a47db3b8d08333cb78 423 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 141 147 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BAMF_3132 7f22341e8ae033a47db3b8d08333cb78 423 Gene3D G3DSA:3.40.50.150 118 390 4.3E-59 T 12-10-2018 BAMF_1540 c8a3c6f05a8da2e02917b57fb8cd4b04 490 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 221 235 - T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BAMF_1540 c8a3c6f05a8da2e02917b57fb8cd4b04 490 Gene3D G3DSA:3.40.640.10 6 282 2.2E-94 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_1540 c8a3c6f05a8da2e02917b57fb8cd4b04 490 SUPERFAMILY SSF55904 341 487 2.09E-41 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 BAMF_1540 c8a3c6f05a8da2e02917b57fb8cd4b04 490 SUPERFAMILY SSF53383 6 385 7.34E-95 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_1540 c8a3c6f05a8da2e02917b57fb8cd4b04 490 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 6 368 1.4E-120 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BAMF_1540 c8a3c6f05a8da2e02917b57fb8cd4b04 490 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 385 457 4.4E-12 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 BAMF_1540 c8a3c6f05a8da2e02917b57fb8cd4b04 490 Gene3D G3DSA:3.90.105.10 420 477 4.9E-19 T 12-10-2018 BAMF_1540 c8a3c6f05a8da2e02917b57fb8cd4b04 490 Gene3D G3DSA:3.90.1150.10 313 405 2.2E-6 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1164 d37f949e85c3b68c98656f26993ac2a5 613 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 532 1.3E-177 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BAMF_1164 d37f949e85c3b68c98656f26993ac2a5 613 SUPERFAMILY SSF52402 231 576 1.47E-74 T 12-10-2018 BAMF_1164 d37f949e85c3b68c98656f26993ac2a5 613 PIRSF PIRSF001589 1 610 9.6E-149 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BAMF_1164 d37f949e85c3b68c98656f26993ac2a5 613 Pfam PF13537 Glutamine amidotransferase domain 48 169 5.3E-47 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BAMF_1164 d37f949e85c3b68c98656f26993ac2a5 613 Gene3D G3DSA:3.60.20.10 2 184 1.4E-63 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BAMF_1164 d37f949e85c3b68c98656f26993ac2a5 613 Pfam PF00733 Asparagine synthase 242 604 4.1E-99 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 BAMF_1164 d37f949e85c3b68c98656f26993ac2a5 613 SUPERFAMILY SSF56235 1 226 1.89E-64 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BAMF_0358 59efd636779973a887f74eb9087f9eab 435 PIRSF PIRSF000521 34 137 3.1E-8 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_0358 59efd636779973a887f74eb9087f9eab 435 PIRSF PIRSF000521 131 435 2.3E-36 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_0358 59efd636779973a887f74eb9087f9eab 435 Gene3D G3DSA:3.40.640.10 66 333 1.3E-160 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_0358 59efd636779973a887f74eb9087f9eab 435 SUPERFAMILY SSF53383 33 435 4.3E-131 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_0358 59efd636779973a887f74eb9087f9eab 435 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 287 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_0358 59efd636779973a887f74eb9087f9eab 435 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 16 435 1.3E-223 T 12-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 BAMF_0358 59efd636779973a887f74eb9087f9eab 435 Pfam PF00202 Aminotransferase class-III 33 435 5.5E-124 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_0358 59efd636779973a887f74eb9087f9eab 435 Gene3D G3DSA:3.90.1150.10 14 431 1.3E-160 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 SUPERFAMILY SSF56112 8 267 1.75E-84 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 Gene3D G3DSA:1.10.510.10 92 277 3.0E-55 T 12-10-2018 BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 Gene3D G3DSA:3.30.200.20 1 90 7.7E-31 T 12-10-2018 BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 130 142 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 Pfam PF03793 PASTA domain 495 556 4.0E-13 T 12-10-2018 IPR005543 PASTA domain BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 Pfam PF03793 PASTA domain 431 489 1.2E-15 T 12-10-2018 IPR005543 PASTA domain BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 Pfam PF03793 PASTA domain 358 419 2.8E-12 T 12-10-2018 IPR005543 PASTA domain BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 Pfam PF00069 Protein kinase domain 11 260 1.4E-56 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 Gene3D G3DSA:3.30.10.20 353 424 8.9E-14 T 12-10-2018 BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 SMART SM00220 11 271 2.9E-78 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 Gene3D G3DSA:2.60.40.2560 564 642 3.5E-16 T 12-10-2018 BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 Gene3D G3DSA:3.30.10.20 425 491 2.0E-15 T 12-10-2018 BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 Gene3D G3DSA:3.30.10.20 494 559 3.0E-15 T 12-10-2018 BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 17 40 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 SMART SM00740 354 422 3.0E-15 T 12-10-2018 IPR005543 PASTA domain BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 SMART SM00740 491 557 5.4E-17 T 12-10-2018 IPR005543 PASTA domain BAMF_1649 883b60290eb47769c80c23c588ab9c6f 647 SMART SM00740 423 490 1.4E-15 T 12-10-2018 IPR005543 PASTA domain BAMF_3468 dd4b6e2a125f2a61bbad936d0a9eba59 254 SUPERFAMILY SSF89550 1 213 1.0E-19 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BAMF_3468 dd4b6e2a125f2a61bbad936d0a9eba59 254 PIRSF PIRSF016557 1 254 3.8E-99 T 12-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 BAMF_3468 dd4b6e2a125f2a61bbad936d0a9eba59 254 Gene3D G3DSA:3.20.20.140 1 254 1.7E-97 T 12-10-2018 BAMF_1650 f3153978fd3f15a957dfdb93b14b28d4 296 Gene3D G3DSA:2.40.50.140 1 63 1.3E-28 T 12-10-2018 BAMF_1650 f3153978fd3f15a957dfdb93b14b28d4 296 SUPERFAMILY SSF52540 66 294 1.63E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1650 f3153978fd3f15a957dfdb93b14b28d4 296 SUPERFAMILY SSF50249 1 64 3.0E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_1650 f3153978fd3f15a957dfdb93b14b28d4 296 Gene3D G3DSA:1.10.40.50 229 296 8.8E-26 T 12-10-2018 BAMF_1650 f3153978fd3f15a957dfdb93b14b28d4 296 Pfam PF16745 RsgA N-terminal domain 3 58 5.0E-24 T 12-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal BAMF_1650 f3153978fd3f15a957dfdb93b14b28d4 296 Gene3D G3DSA:3.40.50.300 64 228 2.8E-49 T 12-10-2018 BAMF_1650 f3153978fd3f15a957dfdb93b14b28d4 296 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 2 293 39.044 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 BAMF_1650 f3153978fd3f15a957dfdb93b14b28d4 296 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 41 286 1.2E-93 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 BAMF_1650 f3153978fd3f15a957dfdb93b14b28d4 296 Pfam PF03193 RsgA GTPase 61 228 2.4E-62 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 BAMF_1440 070926e3702f6934d9ea42cbabd79906 398 Gene3D G3DSA:3.40.640.10 44 285 7.0E-115 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_1440 070926e3702f6934d9ea42cbabd79906 398 Gene3D G3DSA:3.90.1150.10 26 383 7.0E-115 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1440 070926e3702f6934d9ea42cbabd79906 398 SUPERFAMILY SSF53383 5 386 9.11E-106 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_1440 070926e3702f6934d9ea42cbabd79906 398 Pfam PF00155 Aminotransferase class I and II 32 383 1.0E-69 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_0952 c870cb58623252298061d5547c251771 202 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 57 191 3.3E-30 T 12-10-2018 IPR010090 Phage tail tape measure protein BAMF_0952 c870cb58623252298061d5547c251771 202 Pfam PF10145 Phage-related minor tail protein 98 191 1.5E-21 T 12-10-2018 IPR010090 Phage tail tape measure protein BAMF_1476 603da802ba223229400575a1031fd21d 389 Gene3D G3DSA:3.40.640.10 58 278 1.0E-130 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_1476 603da802ba223229400575a1031fd21d 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 113 134 2.2E-11 T 12-10-2018 BAMF_1476 603da802ba223229400575a1031fd21d 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 159 183 2.2E-11 T 12-10-2018 BAMF_1476 603da802ba223229400575a1031fd21d 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 195 218 2.2E-11 T 12-10-2018 BAMF_1476 603da802ba223229400575a1031fd21d 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 91 111 2.2E-11 T 12-10-2018 BAMF_1476 603da802ba223229400575a1031fd21d 389 Pfam PF00155 Aminotransferase class I and II 29 375 1.6E-64 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_1476 603da802ba223229400575a1031fd21d 389 Gene3D G3DSA:3.90.1150.10 29 375 1.0E-130 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1476 603da802ba223229400575a1031fd21d 389 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 228 241 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BAMF_1476 603da802ba223229400575a1031fd21d 389 SUPERFAMILY SSF53383 4 379 4.71E-114 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_0425 b42bc8f203661d3f53155f9b5f64fed8 308 Pfam PF00005 ABC transporter 21 162 2.4E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0425 b42bc8f203661d3f53155f9b5f64fed8 308 SMART SM00382 30 211 8.0E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0425 b42bc8f203661d3f53155f9b5f64fed8 308 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0425 b42bc8f203661d3f53155f9b5f64fed8 308 Gene3D G3DSA:3.40.50.300 2 245 7.0E-61 T 12-10-2018 BAMF_0425 b42bc8f203661d3f53155f9b5f64fed8 308 SUPERFAMILY SSF52540 3 213 2.15E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2936 e2f28d1b680688792c75de2b7e5960e9 390 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 368 2.6E-99 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BAMF_2936 e2f28d1b680688792c75de2b7e5960e9 390 Gene3D G3DSA:3.40.50.1970 1 184 4.8E-56 T 12-10-2018 BAMF_2936 e2f28d1b680688792c75de2b7e5960e9 390 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BAMF_2936 e2f28d1b680688792c75de2b7e5960e9 390 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BAMF_2936 e2f28d1b680688792c75de2b7e5960e9 390 SUPERFAMILY SSF56796 1 388 1.23E-115 T 12-10-2018 BAMF_2936 e2f28d1b680688792c75de2b7e5960e9 390 Gene3D G3DSA:1.20.1090.10 185 389 1.4E-44 T 12-10-2018 BAMF_3753 1338effd0c66fa3c162dfdbf7df0a4fa 891 Pfam PF10593 Z1 domain 407 633 1.0E-75 T 12-10-2018 IPR018310 Putative endonuclease, Z1 domain BAMF_3753 1338effd0c66fa3c162dfdbf7df0a4fa 891 SUPERFAMILY SSF52540 138 329 7.97E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0636 7c2a35b83b84d340a9d89cd3774824d0 162 SUPERFAMILY SSF52255 4 160 5.62E-69 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 BAMF_0636 7c2a35b83b84d340a9d89cd3774824d0 162 SMART SM01001 3 154 1.7E-107 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BAMF_0636 7c2a35b83b84d340a9d89cd3774824d0 162 Pfam PF00731 AIR carboxylase 6 152 7.4E-66 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BAMF_0636 7c2a35b83b84d340a9d89cd3774824d0 162 Gene3D G3DSA:3.40.50.7700 1 162 1.9E-73 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 BAMF_0636 7c2a35b83b84d340a9d89cd3774824d0 162 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 161 3.0E-68 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BAMF_0636 7c2a35b83b84d340a9d89cd3774824d0 162 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 33.345 T 12-10-2018 IPR033747 Class I PurE BAMF_0636 7c2a35b83b84d340a9d89cd3774824d0 162 PIRSF PIRSF001338 1 162 6.2E-69 T 12-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 BAMF_0988 94b65c826dfe7c8a05991ff0517f39af 386 Gene3D G3DSA:1.25.10.10 265 382 1.2E-9 T 12-10-2018 IPR011989 Armadillo-like helical BAMF_0988 94b65c826dfe7c8a05991ff0517f39af 386 SMART SM00567 E-Z type HEAT repeats 330 359 1.3E-4 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 BAMF_0988 94b65c826dfe7c8a05991ff0517f39af 386 SMART SM00567 E-Z type HEAT repeats 298 327 270.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 BAMF_0988 94b65c826dfe7c8a05991ff0517f39af 386 Pfam PF08331 Domain of unknown function (DUF1730) 57 135 8.7E-18 T 12-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 BAMF_0988 94b65c826dfe7c8a05991ff0517f39af 386 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 11 342 7.4E-126 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 BAMF_0988 94b65c826dfe7c8a05991ff0517f39af 386 SUPERFAMILY SSF48371 265 372 8.42E-11 T 12-10-2018 IPR016024 Armadillo-type fold BAMF_0988 94b65c826dfe7c8a05991ff0517f39af 386 Pfam PF13646 HEAT repeats 300 364 1.1E-10 T 12-10-2018 BAMF_0988 94b65c826dfe7c8a05991ff0517f39af 386 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 309 42.397 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 BAMF_0988 94b65c826dfe7c8a05991ff0517f39af 386 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BAMF_0988 94b65c826dfe7c8a05991ff0517f39af 386 Pfam PF13484 4Fe-4S double cluster binding domain 188 250 2.2E-17 T 12-10-2018 BAMF_0988 94b65c826dfe7c8a05991ff0517f39af 386 SUPERFAMILY SSF54862 164 250 4.18E-14 T 12-10-2018 BAMF_2681 f756f6695bba3bfb0fd8fd9914d5865d 394 Gene3D G3DSA:1.20.1090.10 179 391 1.1E-57 T 12-10-2018 BAMF_2681 f756f6695bba3bfb0fd8fd9914d5865d 394 Pfam PF13685 Iron-containing alcohol dehydrogenase 29 295 4.7E-71 T 12-10-2018 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 BAMF_2681 f756f6695bba3bfb0fd8fd9914d5865d 394 Hamap MF_00497_B Glycerol-1-phosphate dehydrogenase [NAD(P)+] [egsA]. 3 384 56.485 T 12-10-2018 IPR023003 Glycerol-1-phosphate dehydrogenase, bacteria GO:0050492|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 BAMF_2681 f756f6695bba3bfb0fd8fd9914d5865d 394 Gene3D G3DSA:3.40.50.1970 17 178 2.6E-34 T 12-10-2018 BAMF_2681 f756f6695bba3bfb0fd8fd9914d5865d 394 SUPERFAMILY SSF56796 23 384 2.49E-60 T 12-10-2018 BAMF_3147 cfeda859c9c0e2ea16e51df7fcba02b7 366 Gene3D G3DSA:1.20.1740.10 4 365 1.3E-10 T 12-10-2018 BAMF_3147 cfeda859c9c0e2ea16e51df7fcba02b7 366 Pfam PF03845 Spore germination protein 9 330 6.6E-97 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BAMF_3147 cfeda859c9c0e2ea16e51df7fcba02b7 366 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 9 363 2.2E-99 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BAMF_3522 60062da0bde53483e60070ba76e3d921 170 SUPERFAMILY SSF81573 74 131 5.36E-10 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily BAMF_3522 60062da0bde53483e60070ba76e3d921 170 Pfam PF00430 ATP synthase B/B' CF(0) 17 147 2.7E-37 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BAMF_3522 60062da0bde53483e60070ba76e3d921 170 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 20 166 7.7E-50 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 BAMF_3522 60062da0bde53483e60070ba76e3d921 170 Hamap MF_01398 ATP synthase subunit b [atpF]. 10 148 13.488 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BAMF_0703 dd14b2bf66e9b865837fc65737e47df3 461 PIRSF PIRSF006060 11 461 6.1E-90 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_0703 dd14b2bf66e9b865837fc65737e47df3 461 Gene3D G3DSA:1.20.1740.10 21 460 1.6E-130 T 12-10-2018 BAMF_0703 dd14b2bf66e9b865837fc65737e47df3 461 Pfam PF13520 Amino acid permease 26 428 4.8E-60 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_3878 f93887dc6f915c4dc05a8b3277b5e76b 309 SMART SM01131 181 307 5.4E-59 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BAMF_3878 f93887dc6f915c4dc05a8b3277b5e76b 309 SUPERFAMILY SSF64182 1 307 1.7E-86 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily BAMF_3878 f93887dc6f915c4dc05a8b3277b5e76b 309 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 3 309 48.805 T 12-10-2018 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BAMF_3878 f93887dc6f915c4dc05a8b3277b5e76b 309 Gene3D G3DSA:3.10.310.20 190 308 1.3E-39 T 12-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BAMF_3878 f93887dc6f915c4dc05a8b3277b5e76b 309 Pfam PF02833 DHHA2 domain 183 306 3.2E-23 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BAMF_3878 f93887dc6f915c4dc05a8b3277b5e76b 309 Gene3D G3DSA:3.90.1640.10 1 188 1.7E-85 T 12-10-2018 BAMF_3878 f93887dc6f915c4dc05a8b3277b5e76b 309 Pfam PF01368 DHH family 3 146 3.6E-32 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BAMF_1075 d2be3acae370fd3e703a296ff421320f 429 SUPERFAMILY SSF51905 1 161 1.13E-7 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1075 d2be3acae370fd3e703a296ff421320f 429 Gene3D G3DSA:3.50.50.60 1 422 2.7E-105 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1075 d2be3acae370fd3e703a296ff421320f 429 SUPERFAMILY SSF51905 125 342 1.83E-9 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1075 d2be3acae370fd3e703a296ff421320f 429 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 1 335 7.2E-108 T 12-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase BAMF_0389 29200e5ed65fbb1a732f7f5fafdee65f 269 Pfam PF10997 Alternate to MurJ 15 266 1.2E-97 T 12-10-2018 IPR021260 Lipid II flippase Amj BAMF_0389 29200e5ed65fbb1a732f7f5fafdee65f 269 Hamap MF_02077 Lipid II flippase Amj [amj]. 5 267 26.811 T 12-10-2018 IPR021260 Lipid II flippase Amj BAMF_3690 d53a1924d9e96c5d2bbea31e99c9075a 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 93 4.1E-22 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BAMF_3690 d53a1924d9e96c5d2bbea31e99c9075a 102 Gene3D G3DSA:3.40.50.2300 1 102 7.3E-38 T 12-10-2018 BAMF_3690 d53a1924d9e96c5d2bbea31e99c9075a 102 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 2 93 9.0E-38 T 12-10-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 BAMF_3690 d53a1924d9e96c5d2bbea31e99c9075a 102 SUPERFAMILY SSF52794 1 98 2.88E-35 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BAMF_3414 ccc739c0b20d3b844a52f550841187da 256 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 56 230 5.8E-71 T 12-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 BAMF_3414 ccc739c0b20d3b844a52f550841187da 256 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 60 224 6.9E-60 T 12-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 BAMF_3414 ccc739c0b20d3b844a52f550841187da 256 Hamap MF_02070 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase. 2 239 55.906 T 12-10-2018 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase GO:0047244 MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 BAMF_3621 71819c5a295e6357f1ac1ad16a303323 247 Gene3D G3DSA:3.90.550.10 5 214 1.1E-29 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3621 71819c5a295e6357f1ac1ad16a303323 247 Pfam PF02348 Cytidylyltransferase 7 209 3.0E-39 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 BAMF_3621 71819c5a295e6357f1ac1ad16a303323 247 SUPERFAMILY SSF53448 5 212 7.1E-23 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0212 b1cd2dfdfffa3c6cc08085bb47649cea 177 Gene3D G3DSA:1.20.120.1760 1 160 4.7E-10 T 12-10-2018 BAMF_0212 b1cd2dfdfffa3c6cc08085bb47649cea 177 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 45 67 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BAMF_0212 b1cd2dfdfffa3c6cc08085bb47649cea 177 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 67 1.4E-13 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BAMF_0212 b1cd2dfdfffa3c6cc08085bb47649cea 177 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 9 161 2.0E-60 T 12-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 BAMF_1237 45ad5a2ada6b2ff58ae0d223ff8c094d 249 Pfam PF00149 Calcineurin-like phosphoesterase 5 194 2.8E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BAMF_1237 45ad5a2ada6b2ff58ae0d223ff8c094d 249 SUPERFAMILY SSF56300 1 236 5.86E-40 T 12-10-2018 BAMF_1237 45ad5a2ada6b2ff58ae0d223ff8c094d 249 Hamap MF_01443 Bis(5'-nucleosyl)-tetraphosphatase PrpE [asymmetrical] [prpE]. 1 245 60.458 T 12-10-2018 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE GO:0004081|GO:0016151 KEGG: 00230+3.6.1.17|KEGG: 00240+3.6.1.17 BAMF_1237 45ad5a2ada6b2ff58ae0d223ff8c094d 249 Gene3D G3DSA:3.60.21.10 1 244 2.0E-62 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BAMF_0020 18021a73472407a67df67fdef82fbbc0 563 SUPERFAMILY SSF48019 244 362 8.08E-26 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BAMF_0020 18021a73472407a67df67fdef82fbbc0 563 Gene3D G3DSA:3.40.50.300 13 177 8.2E-105 T 12-10-2018 BAMF_0020 18021a73472407a67df67fdef82fbbc0 563 Gene3D G3DSA:1.20.272.10 242 361 7.9E-9 T 12-10-2018 BAMF_0020 18021a73472407a67df67fdef82fbbc0 563 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.5E-45 T 12-10-2018 BAMF_0020 18021a73472407a67df67fdef82fbbc0 563 SMART SM00382 37 179 2.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0020 18021a73472407a67df67fdef82fbbc0 563 SUPERFAMILY SSF52540 31 222 1.53E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0020 18021a73472407a67df67fdef82fbbc0 563 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 240 362 2.0E-11 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 BAMF_0020 18021a73472407a67df67fdef82fbbc0 563 Gene3D G3DSA:1.10.8.60 8 233 8.2E-105 T 12-10-2018 BAMF_0020 18021a73472407a67df67fdef82fbbc0 563 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 358 3.1E-144 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 BAMF_0020 18021a73472407a67df67fdef82fbbc0 563 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 3.5E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BAMF_0020 18021a73472407a67df67fdef82fbbc0 563 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 3.5E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BAMF_1508 cbf2c707c4a8605e8195c9264002361c 232 Pfam PF04893 Yip1 domain 21 216 1.5E-26 T 12-10-2018 IPR006977 Yip1 domain GO:0016020 BAMF_1351 27b4f8f6db736c73c7f4a2ab348c72a9 147 Gene3D G3DSA:2.30.110.40 1 142 1.2E-61 T 12-10-2018 IPR038628 XkdM-like superfamily BAMF_1351 27b4f8f6db736c73c7f4a2ab348c72a9 147 Pfam PF09393 Phage tail tube protein 2 141 5.0E-54 T 12-10-2018 IPR018989 Phage tail tube protein BAMF_1351 27b4f8f6db736c73c7f4a2ab348c72a9 147 SUPERFAMILY SSF69279 6 142 1.87E-49 T 12-10-2018 BAMF_3428 ce4d2e45e0018e5d856a33d4d2c8a3b7 382 Gene3D G3DSA:3.60.21.10 118 340 2.4E-11 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BAMF_3428 ce4d2e45e0018e5d856a33d4d2c8a3b7 382 SUPERFAMILY SSF56300 62 308 3.16E-42 T 12-10-2018 BAMF_3428 ce4d2e45e0018e5d856a33d4d2c8a3b7 382 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 62 300 3.4E-77 T 12-10-2018 IPR019079 Capsule synthesis protein, CapA BAMF_3428 ce4d2e45e0018e5d856a33d4d2c8a3b7 382 SMART SM00854 60 300 5.0E-92 T 12-10-2018 IPR019079 Capsule synthesis protein, CapA BAMF_3416 a59145f57340e696d787d7b6f4558d14 881 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 735 862 6.9E-11 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BAMF_3416 a59145f57340e696d787d7b6f4558d14 881 Gene3D G3DSA:2.30.30.40 629 702 1.7E-11 T 12-10-2018 BAMF_3416 a59145f57340e696d787d7b6f4558d14 881 Pfam PF05036 Sporulation related domain 244 306 2.4E-5 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 BAMF_3416 a59145f57340e696d787d7b6f4558d14 881 SMART SM00047 722 874 3.9E-58 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BAMF_3416 a59145f57340e696d787d7b6f4558d14 881 Pfam PF08239 Bacterial SH3 domain 638 694 2.1E-9 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_3416 a59145f57340e696d787d7b6f4558d14 881 SMART SM00287 629 699 1.4E-11 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_3416 a59145f57340e696d787d7b6f4558d14 881 Gene3D G3DSA:1.10.530.10 731 867 1.2E-6 T 12-10-2018 BAMF_0145 46ce9a129e2f55fe76c468b5ef3b8777 281 SMART SM00382 34 219 2.3E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0145 46ce9a129e2f55fe76c468b5ef3b8777 281 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 7 275 1.2E-118 T 12-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 BAMF_0145 46ce9a129e2f55fe76c468b5ef3b8777 281 Pfam PF00005 ABC transporter 25 171 1.3E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0145 46ce9a129e2f55fe76c468b5ef3b8777 281 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0145 46ce9a129e2f55fe76c468b5ef3b8777 281 SUPERFAMILY SSF52540 6 231 3.67E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0145 46ce9a129e2f55fe76c468b5ef3b8777 281 Gene3D G3DSA:3.40.50.300 3 279 3.0E-81 T 12-10-2018 BAMF_3685 b4994003b1c1e25ff99fd6e31bab83a1 394 Pfam PF04914 DltD protein 41 387 4.0E-115 T 12-10-2018 IPR006998 DltD BAMF_3685 b4994003b1c1e25ff99fd6e31bab83a1 394 SUPERFAMILY SSF52266 295 387 6.77E-6 T 12-10-2018 BAMF_3685 b4994003b1c1e25ff99fd6e31bab83a1 394 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 6 386 1.1E-131 T 12-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes BAMF_3685 b4994003b1c1e25ff99fd6e31bab83a1 394 PIRSF PIRSF021438 1 389 1.2E-145 T 12-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes BAMF_0680 3be177fd8d71a39683197ebca586baaa 82 Pfam PF11007 Spore coat associated protein JA (CotJA) 33 68 1.5E-12 T 12-10-2018 IPR020256 Spore coat protein CotJA BAMF_0680 3be177fd8d71a39683197ebca586baaa 82 ProDom PD059966 COTJA SPORE PROTEIN-RELATED COAT-ASSOCIATED COTJAA JA 10 75 4.0E-29 T 12-10-2018 IPR020256 Spore coat protein CotJA BAMF_3352 e162160b27f421a8479b22f4e2e40742 365 PIRSF PIRSF012569 1 365 2.4E-129 T 12-10-2018 IPR016599 Uncharacterised conserved protein UCP012569 BAMF_3352 e162160b27f421a8479b22f4e2e40742 365 Pfam PF13349 Putative adhesin 110 353 1.4E-19 T 12-10-2018 IPR025164 Putative adhesin BAMF_0750 5f3df1b68175c1a8eee292e4a3a4b63f 253 Pfam PF07907 YibE/F-like protein 4 244 4.3E-70 T 12-10-2018 IPR012507 YibE/F-like BAMF_0750 5f3df1b68175c1a8eee292e4a3a4b63f 253 PIRSF PIRSF031503 1 253 3.6E-81 T 12-10-2018 IPR014564 Uncharacterised conserved protein UCP031503, transmembrane BAMF_2819 fe99d92e1697717e4e65e8cf7fa897d8 646 PIRSF PIRSF018968 1 646 5.9E-147 T 12-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 BAMF_0990 2826ed632173b149f29278898faf727c 157 Pfam PF00588 SpoU rRNA Methylase family 3 145 2.6E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BAMF_0990 2826ed632173b149f29278898faf727c 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 2 156 2.9E-72 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BAMF_0990 2826ed632173b149f29278898faf727c 157 SUPERFAMILY SSF75217 3 155 2.09E-45 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases BAMF_0990 2826ed632173b149f29278898faf727c 157 Gene3D G3DSA:3.40.1280.10 1 157 4.5E-68 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BAMF_0990 2826ed632173b149f29278898faf727c 157 PIRSF PIRSF029256 2 157 1.8E-68 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BAMF_0990 2826ed632173b149f29278898faf727c 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 154 34.573 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BAMF_2955 26dbd97a162336464208b64dce69fa70 510 SUPERFAMILY SSF52540 256 488 5.53E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2955 26dbd97a162336464208b64dce69fa70 510 Pfam PF00005 ABC transporter 274 429 1.1E-17 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_2955 26dbd97a162336464208b64dce69fa70 510 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_2955 26dbd97a162336464208b64dce69fa70 510 SUPERFAMILY SSF52540 3 226 1.33E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2955 26dbd97a162336464208b64dce69fa70 510 SMART SM00382 29 217 2.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2955 26dbd97a162336464208b64dce69fa70 510 SMART SM00382 282 509 18.0 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2955 26dbd97a162336464208b64dce69fa70 510 Pfam PF00005 ABC transporter 21 169 3.3E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_2955 26dbd97a162336464208b64dce69fa70 510 Gene3D G3DSA:3.40.50.300 251 494 1.6E-39 T 12-10-2018 BAMF_2955 26dbd97a162336464208b64dce69fa70 510 Gene3D G3DSA:3.40.50.300 2 236 1.1E-55 T 12-10-2018 BAMF_2955 26dbd97a162336464208b64dce69fa70 510 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 Gene3D G3DSA:3.40.50.880 535 683 2.9E-42 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 SUPERFAMILY SSF52317 541 681 6.11E-19 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 PIRSF PIRSF038927 1 683 0.0 T 12-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 ProSitePatterns PS00438 Catalase proximal active site signature. 67 83 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 PRINTS PR00067 Catalase signature 316 343 4.5E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 PRINTS PR00067 Catalase signature 44 67 4.5E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 PRINTS PR00067 Catalase signature 107 125 4.5E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 PRINTS PR00067 Catalase signature 348 374 4.5E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 PRINTS PR00067 Catalase signature 128 145 4.5E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 PRINTS PR00067 Catalase signature 147 165 4.5E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 SUPERFAMILY SSF56634 12 535 1.83E-227 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 Pfam PF00199 Catalase 31 416 3.1E-181 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 Gene3D G3DSA:1.20.1370.20 442 534 5.3E-33 T 12-10-2018 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 Pfam PF01965 DJ-1/PfpI family 543 649 1.0E-13 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 361 369 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 SMART SM01060 31 419 3.8E-277 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 Pfam PF06628 Catalase-related immune-responsive 446 510 3.7E-23 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BAMF_3730 39a1a38b40fef2a7c0325d8236fc2565 683 Gene3D G3DSA:2.40.180.10 1 441 2.6E-213 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 BAMF_3236 040fedadcf51cb28054c54b32cb5b031 379 Gene3D G3DSA:3.40.50.300 1 240 2.3E-76 T 12-10-2018 BAMF_3236 040fedadcf51cb28054c54b32cb5b031 379 Gene3D G3DSA:3.10.580.10 247 372 2.6E-36 T 12-10-2018 BAMF_3236 040fedadcf51cb28054c54b32cb5b031 379 Pfam PF00571 CBS domain 311 363 1.6E-7 T 12-10-2018 IPR000644 CBS domain BAMF_3236 040fedadcf51cb28054c54b32cb5b031 379 Pfam PF00571 CBS domain 251 297 1.5E-8 T 12-10-2018 IPR000644 CBS domain BAMF_3236 040fedadcf51cb28054c54b32cb5b031 379 Pfam PF00005 ABC transporter 19 163 1.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3236 040fedadcf51cb28054c54b32cb5b031 379 SMART SM00116 318 366 4.5E-8 T 12-10-2018 IPR000644 CBS domain BAMF_3236 040fedadcf51cb28054c54b32cb5b031 379 SMART SM00116 258 306 4.9E-10 T 12-10-2018 IPR000644 CBS domain BAMF_3236 040fedadcf51cb28054c54b32cb5b031 379 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 13 371 7.9E-183 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 BAMF_3236 040fedadcf51cb28054c54b32cb5b031 379 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3236 040fedadcf51cb28054c54b32cb5b031 379 SUPERFAMILY SSF52540 1 240 2.58E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3236 040fedadcf51cb28054c54b32cb5b031 379 SUPERFAMILY SSF54631 250 374 2.17E-24 T 12-10-2018 BAMF_3236 040fedadcf51cb28054c54b32cb5b031 379 SMART SM00382 27 213 9.2E-22 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1992 22af39f72e2c30320ecea031285e45c6 208 Pfam PF02525 Flavodoxin-like fold 3 203 4.0E-43 T 12-10-2018 IPR003680 Flavodoxin-like fold BAMF_1992 22af39f72e2c30320ecea031285e45c6 208 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 208 28.898 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 BAMF_1992 22af39f72e2c30320ecea031285e45c6 208 SUPERFAMILY SSF52218 1 208 1.62E-48 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_1992 22af39f72e2c30320ecea031285e45c6 208 Gene3D G3DSA:3.40.50.360 1 208 3.6E-58 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_2595 a2dc82a808327c9afd217c68eedc5379 180 Gene3D G3DSA:1.10.10.10 1 67 1.1E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2595 a2dc82a808327c9afd217c68eedc5379 180 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 85 175 1.0E-38 T 12-10-2018 IPR004173 3H domain GO:0036094 BAMF_2595 a2dc82a808327c9afd217c68eedc5379 180 SUPERFAMILY SSF46785 10 66 3.01E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2595 a2dc82a808327c9afd217c68eedc5379 180 Pfam PF08279 HTH domain 13 64 2.8E-13 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BAMF_2595 a2dc82a808327c9afd217c68eedc5379 180 Gene3D G3DSA:3.30.1340.20 74 180 1.5E-36 T 12-10-2018 IPR035922 3H domain superfamily BAMF_2595 a2dc82a808327c9afd217c68eedc5379 180 SUPERFAMILY SSF75500 76 179 3.92E-37 T 12-10-2018 IPR035922 3H domain superfamily BAMF_2595 a2dc82a808327c9afd217c68eedc5379 180 PIRSF PIRSF037847 7 180 3.2E-67 T 12-10-2018 IPR026043 Transcription repressor NadR BAMF_2595 a2dc82a808327c9afd217c68eedc5379 180 Pfam PF02829 3H domain 81 177 1.1E-34 T 12-10-2018 IPR004173 3H domain GO:0036094 BAMF_2036 738cff44d694f70565b0c36cd7fc3c2d 83 ProDom PD710533 YODI TRANSMEMBRANE MEMBRANE 2 83 9.0E-12 T 12-10-2018 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 220 246 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 30 250 6.0E-88 T 12-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 61 74 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 Pfam PF04542 Sigma-70 region 2 37 104 1.2E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 Pfam PF04539 Sigma-70 region 3 115 183 4.0E-13 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 PRINTS PR00046 Major sigma-70 factor signature 235 246 2.6E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 PRINTS PR00046 Major sigma-70 factor signature 220 235 2.6E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 PRINTS PR00046 Major sigma-70 factor signature 203 215 2.6E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 PRINTS PR00046 Major sigma-70 factor signature 85 93 2.6E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 PRINTS PR00046 Major sigma-70 factor signature 61 74 2.6E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 22 249 1.5E-113 T 12-10-2018 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 Pfam PF04545 Sigma-70, region 4 199 247 4.1E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 Gene3D G3DSA:1.10.10.10 179 253 1.1E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2240 367df27e511a8aa911d009a08f09e356 255 PIRSF PIRSF000770 11 255 7.5E-36 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 SUPERFAMILY SSF88659 171 250 5.05E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_2240 367df27e511a8aa911d009a08f09e356 255 SUPERFAMILY SSF88946 7 105 4.97E-34 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 250 6.2E-37 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 Gene3D G3DSA:1.10.601.10 2 105 2.6E-28 T 12-10-2018 BAMF_2240 367df27e511a8aa911d009a08f09e356 255 SUPERFAMILY SSF88659 109 184 1.18E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_2240 367df27e511a8aa911d009a08f09e356 255 Gene3D G3DSA:1.10.10.10 106 160 8.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1009 b8d88dd49a1bb17c178a27e9f67928fc 463 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 1.5E-97 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BAMF_1009 b8d88dd49a1bb17c178a27e9f67928fc 463 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 6.0E-20 T 12-10-2018 BAMF_1009 b8d88dd49a1bb17c178a27e9f67928fc 463 PRINTS PR00173 Glutamate-aspartate symporter signature 106 131 6.0E-20 T 12-10-2018 BAMF_1009 b8d88dd49a1bb17c178a27e9f67928fc 463 PRINTS PR00173 Glutamate-aspartate symporter signature 28 48 6.0E-20 T 12-10-2018 BAMF_1009 b8d88dd49a1bb17c178a27e9f67928fc 463 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 6.0E-20 T 12-10-2018 BAMF_1009 b8d88dd49a1bb17c178a27e9f67928fc 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 6.0E-20 T 12-10-2018 BAMF_1009 b8d88dd49a1bb17c178a27e9f67928fc 463 PRINTS PR00173 Glutamate-aspartate symporter signature 76 96 6.0E-20 T 12-10-2018 BAMF_1009 b8d88dd49a1bb17c178a27e9f67928fc 463 SUPERFAMILY SSF118215 30 441 1.26E-90 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BAMF_1009 b8d88dd49a1bb17c178a27e9f67928fc 463 Gene3D G3DSA:1.10.3860.10 5 457 4.5E-97 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BAMF_0595 4ca78d9672a34c7cabb5994346db5a1c 1065 Pfam PF06605 Prophage endopeptidase tail 41 372 1.3E-25 T 12-10-2018 IPR010572 Prophage tail endopeptidase BAMF_0595 4ca78d9672a34c7cabb5994346db5a1c 1065 TIGRFAM TIGR01665 put_anti_recept: phage minor structural protein, N-terminal region 29 267 2.1E-14 T 12-10-2018 IPR007119 Phage minor structural protein, N-terminal domain BAMF_0595 4ca78d9672a34c7cabb5994346db5a1c 1065 TIGRFAM TIGR01665 put_anti_recept: phage minor structural protein, N-terminal region 286 370 5.1E-9 T 12-10-2018 IPR007119 Phage minor structural protein, N-terminal domain BAMF_0691 de1ee4af6209265481bd2fd642609508 214 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 207 1.4E-34 T 12-10-2018 IPR006214 Bax inhibitor 1-related BAMF_1123 3c1e1a3018a16fb5f6115c5b0ec1d182 472 Pfam PF00501 AMP-binding enzyme 10 381 2.0E-51 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_1123 3c1e1a3018a16fb5f6115c5b0ec1d182 472 Gene3D G3DSA:3.30.300.310 377 453 6.8E-12 T 12-10-2018 BAMF_1123 3c1e1a3018a16fb5f6115c5b0ec1d182 472 SUPERFAMILY SSF56801 8 438 1.83E-86 T 12-10-2018 BAMF_1123 3c1e1a3018a16fb5f6115c5b0ec1d182 472 Gene3D G3DSA:3.40.50.12780 1 372 3.6E-73 T 12-10-2018 BAMF_1123 3c1e1a3018a16fb5f6115c5b0ec1d182 472 Pfam PF13193 AMP-binding enzyme C-terminal domain 390 443 2.2E-8 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_1859 2ac7b4c7a71826c58ae42fb4b539e8bd 206 Gene3D G3DSA:2.70.50.50 28 205 2.6E-78 T 12-10-2018 BAMF_1859 2ac7b4c7a71826c58ae42fb4b539e8bd 206 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 28 202 2.8E-37 T 12-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal BAMF_1859 2ac7b4c7a71826c58ae42fb4b539e8bd 206 SUPERFAMILY SSF81296 28 205 1.39E-53 T 12-10-2018 IPR014756 Immunoglobulin E-set BAMF_3572 0a9a98b5fd4d305df0046df69dbd0e41 289 SUPERFAMILY SSF51004 170 257 2.09E-11 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily BAMF_3572 0a9a98b5fd4d305df0046df69dbd0e41 289 Gene3D G3DSA:2.130.10.10 132 264 2.3E-14 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BAMF_2774 516faea92153035b6744f1f3ade71efa 334 SUPERFAMILY SSF53822 63 333 1.26E-87 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BAMF_2774 516faea92153035b6744f1f3ade71efa 334 Gene3D G3DSA:1.10.260.40 3 61 1.6E-28 T 12-10-2018 BAMF_2774 516faea92153035b6744f1f3ade71efa 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 12-10-2018 BAMF_2774 516faea92153035b6744f1f3ade71efa 334 SMART SM00354 3 73 5.6E-39 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_2774 516faea92153035b6744f1f3ade71efa 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 4.4E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_2774 516faea92153035b6744f1f3ade71efa 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 4.4E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_2774 516faea92153035b6744f1f3ade71efa 334 Gene3D G3DSA:3.40.50.2300 64 311 3.3E-96 T 12-10-2018 BAMF_2774 516faea92153035b6744f1f3ade71efa 334 SUPERFAMILY SSF47413 3 61 1.0E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_2774 516faea92153035b6744f1f3ade71efa 334 Pfam PF13377 Periplasmic binding protein-like domain 172 332 6.5E-35 T 12-10-2018 BAMF_2774 516faea92153035b6744f1f3ade71efa 334 Gene3D G3DSA:3.40.50.2300 162 292 3.3E-96 T 12-10-2018 BAMF_2774 516faea92153035b6744f1f3ade71efa 334 TIGRFAM TIGR01481 ccpA: catabolite control protein A 3 333 2.3E-161 T 12-10-2018 IPR006377 Catabolite control protein A GO:0006355 BAMF_2774 516faea92153035b6744f1f3ade71efa 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 2.9E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_3305 d9d511776cafed15d795bd485c979db8 489 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 27 331 2.2E-113 T 12-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal BAMF_3305 d9d511776cafed15d795bd485c979db8 489 SUPERFAMILY SSF49899 331 486 4.35E-32 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BAMF_3305 d9d511776cafed15d795bd485c979db8 489 Gene3D G3DSA:2.115.10.20 1 347 1.1E-135 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BAMF_3305 d9d511776cafed15d795bd485c979db8 489 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 15 457 1.9E-152 T 12-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 BAMF_3305 d9d511776cafed15d795bd485c979db8 489 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 27 40 - T 12-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 BAMF_3305 d9d511776cafed15d795bd485c979db8 489 SMART SM00640 27 446 4.1E-154 T 12-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 BAMF_3305 d9d511776cafed15d795bd485c979db8 489 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 335 480 8.5E-28 T 12-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal BAMF_3305 d9d511776cafed15d795bd485c979db8 489 Gene3D G3DSA:2.60.120.560 348 483 6.3E-33 T 12-10-2018 BAMF_3305 d9d511776cafed15d795bd485c979db8 489 SUPERFAMILY SSF75005 19 332 3.49E-120 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BAMF_2227 d0f4e5fff1b930285e1e5e97a71a1349 371 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 6 355 3.0E-144 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 BAMF_2227 d0f4e5fff1b930285e1e5e97a71a1349 371 Pfam PF01872 RibD C-terminal domain 146 354 1.3E-65 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 BAMF_2227 d0f4e5fff1b930285e1e5e97a71a1349 371 SUPERFAMILY SSF53597 143 355 4.97E-62 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BAMF_2227 d0f4e5fff1b930285e1e5e97a71a1349 371 SUPERFAMILY SSF53927 1 144 8.03E-48 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BAMF_2227 d0f4e5fff1b930285e1e5e97a71a1349 371 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 145 356 1.1E-78 T 12-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 BAMF_2227 d0f4e5fff1b930285e1e5e97a71a1349 371 Gene3D G3DSA:3.40.140.10 1 134 1.4E-48 T 12-10-2018 BAMF_2227 d0f4e5fff1b930285e1e5e97a71a1349 371 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 98 6.7E-21 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BAMF_2227 d0f4e5fff1b930285e1e5e97a71a1349 371 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BAMF_2227 d0f4e5fff1b930285e1e5e97a71a1349 371 Gene3D G3DSA:3.40.430.10 135 361 9.1E-79 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BAMF_2227 d0f4e5fff1b930285e1e5e97a71a1349 371 PIRSF PIRSF006769 1 360 9.6E-132 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 BAMF_2946 c4fa54a788959ecfc6a8f93668b9b122 128 SUPERFAMILY SSF141251 3 125 3.01E-54 T 12-10-2018 IPR038080 Kinase associated protein B superfamily BAMF_2946 c4fa54a788959ecfc6a8f93668b9b122 128 SMART SM01298 14 126 2.7E-77 T 12-10-2018 IPR014916 Kinase associated protein B BAMF_2946 c4fa54a788959ecfc6a8f93668b9b122 128 Pfam PF08810 Kinase associated protein B 14 125 1.6E-48 T 12-10-2018 IPR014916 Kinase associated protein B BAMF_2946 c4fa54a788959ecfc6a8f93668b9b122 128 Gene3D G3DSA:2.30.30.430 1 125 1.9E-51 T 12-10-2018 IPR038080 Kinase associated protein B superfamily BAMF_2571 6fced2eb9a50ec3d1d82212d8b10c1a9 170 SUPERFAMILY SSF53271 2 164 6.25E-50 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BAMF_2571 6fced2eb9a50ec3d1d82212d8b10c1a9 170 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 1.1E-70 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 BAMF_2571 6fced2eb9a50ec3d1d82212d8b10c1a9 170 Pfam PF00156 Phosphoribosyl transferase domain 35 151 7.2E-16 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BAMF_2571 6fced2eb9a50ec3d1d82212d8b10c1a9 170 Gene3D G3DSA:3.40.50.2020 1 170 1.0E-58 T 12-10-2018 BAMF_2571 6fced2eb9a50ec3d1d82212d8b10c1a9 170 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 38.45 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 BAMF_2906 e58e91fb6f5dfc0d6a078376767484ee 157 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 33 151 1.1E-25 T 12-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family BAMF_2906 e58e91fb6f5dfc0d6a078376767484ee 157 Pfam PF05119 Phage terminase, small subunit 43 138 3.0E-22 T 12-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family BAMF_1643 cbc156220e933c137ddee80e9bde00ed 803 SUPERFAMILY SSF52540 236 448 6.88E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1643 cbc156220e933c137ddee80e9bde00ed 803 SMART SM00490 564 661 7.3E-9 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_1643 cbc156220e933c137ddee80e9bde00ed 803 Pfam PF00271 Helicase conserved C-terminal domain 561 660 4.1E-8 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_1643 cbc156220e933c137ddee80e9bde00ed 803 Hamap MF_00983 Probable primosomal protein N' [priA]. 9 802 26.173 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 BAMF_1643 cbc156220e933c137ddee80e9bde00ed 803 Pfam PF04851 Type III restriction enzyme, res subunit 265 429 1.7E-17 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BAMF_1643 cbc156220e933c137ddee80e9bde00ed 803 Gene3D G3DSA:3.40.50.300 252 448 1.7E-77 T 12-10-2018 BAMF_1643 cbc156220e933c137ddee80e9bde00ed 803 SUPERFAMILY SSF52540 530 706 2.28E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1643 cbc156220e933c137ddee80e9bde00ed 803 SMART SM00487 262 453 9.5E-27 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_1643 cbc156220e933c137ddee80e9bde00ed 803 TIGRFAM TIGR00595 priA: primosomal protein N' 290 800 2.7E-234 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 BAMF_1643 cbc156220e933c137ddee80e9bde00ed 803 Gene3D G3DSA:1.10.8.630 2 115 3.6E-27 T 12-10-2018 BAMF_0227 7273901eb79c3a5a2e9ecb7cfd88121e 306 SUPERFAMILY SSF56112 23 261 6.38E-31 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BAMF_0227 7273901eb79c3a5a2e9ecb7cfd88121e 306 Pfam PF01636 Phosphotransferase enzyme family 32 265 8.1E-24 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase BAMF_0227 7273901eb79c3a5a2e9ecb7cfd88121e 306 Gene3D G3DSA:3.90.1200.10 111 304 2.1E-24 T 12-10-2018 BAMF_0227 7273901eb79c3a5a2e9ecb7cfd88121e 306 Gene3D G3DSA:3.30.200.20 3 98 4.8E-5 T 12-10-2018 BAMF_2162 122042640ebd3eb6dd3e7a068c1a79cc 368 SUPERFAMILY SSF48179 175 283 1.25E-34 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_2162 122042640ebd3eb6dd3e7a068c1a79cc 368 SUPERFAMILY SSF55021 291 350 9.16E-9 T 12-10-2018 BAMF_2162 122042640ebd3eb6dd3e7a068c1a79cc 368 Gene3D G3DSA:1.10.3660.10 182 296 3.6E-36 T 12-10-2018 BAMF_2162 122042640ebd3eb6dd3e7a068c1a79cc 368 Gene3D G3DSA:3.40.50.720 1 180 2.2E-52 T 12-10-2018 BAMF_2162 122042640ebd3eb6dd3e7a068c1a79cc 368 Pfam PF01842 ACT domain 298 347 3.8E-10 T 12-10-2018 IPR002912 ACT domain BAMF_2162 122042640ebd3eb6dd3e7a068c1a79cc 368 Gene3D G3DSA:3.30.70.260 297 362 7.3E-7 T 12-10-2018 BAMF_2162 122042640ebd3eb6dd3e7a068c1a79cc 368 SUPERFAMILY SSF51735 5 171 1.64E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2162 122042640ebd3eb6dd3e7a068c1a79cc 368 Pfam PF02153 Prephenate dehydrogenase 17 275 5.6E-93 T 12-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 BAMF_1142 ab0ea661cf774d7f154985ec83308cc9 174 SUPERFAMILY SSF46785 39 163 2.94E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1142 ab0ea661cf774d7f154985ec83308cc9 174 Pfam PF01047 MarR family 52 110 5.4E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1142 ab0ea661cf774d7f154985ec83308cc9 174 SMART SM00347 45 148 2.3E-21 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1142 ab0ea661cf774d7f154985ec83308cc9 174 Gene3D G3DSA:1.10.10.10 7 163 1.5E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2377 42c333070367e368db1227987b5fa71a 433 SMART SM01091 356 433 2.8E-19 T 12-10-2018 IPR005170 Transporter-associated domain BAMF_2377 42c333070367e368db1227987b5fa71a 433 SUPERFAMILY SSF56176 351 430 2.4E-14 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BAMF_2377 42c333070367e368db1227987b5fa71a 433 SUPERFAMILY SSF54631 203 343 2.78E-26 T 12-10-2018 BAMF_2377 42c333070367e368db1227987b5fa71a 433 Pfam PF01595 Domain of unknown function DUF21 9 201 7.4E-47 T 12-10-2018 IPR002550 CNNM, transmembrane domain BAMF_2377 42c333070367e368db1227987b5fa71a 433 Gene3D G3DSA:3.10.580.10 197 351 4.7E-47 T 12-10-2018 BAMF_2377 42c333070367e368db1227987b5fa71a 433 Pfam PF00571 CBS domain 225 272 0.0017 T 12-10-2018 IPR000644 CBS domain BAMF_2377 42c333070367e368db1227987b5fa71a 433 Pfam PF00571 CBS domain 293 340 0.0044 T 12-10-2018 IPR000644 CBS domain BAMF_2377 42c333070367e368db1227987b5fa71a 433 Gene3D G3DSA:3.30.465.10 352 430 1.7E-15 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BAMF_2377 42c333070367e368db1227987b5fa71a 433 Pfam PF03471 Transporter associated domain 357 431 2.0E-14 T 12-10-2018 IPR005170 Transporter-associated domain BAMF_3325 5a33b2db812cbcf5f0258b05ff5054ee 155 PRINTS PR00502 NUDIX hydrolase family signature 26 40 9.9E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BAMF_3325 5a33b2db812cbcf5f0258b05ff5054ee 155 PRINTS PR00502 NUDIX hydrolase family signature 40 55 9.9E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BAMF_3325 5a33b2db812cbcf5f0258b05ff5054ee 155 Pfam PF00293 NUDIX domain 5 122 1.3E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BAMF_3325 5a33b2db812cbcf5f0258b05ff5054ee 155 SUPERFAMILY SSF55811 4 128 1.21E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BAMF_3325 5a33b2db812cbcf5f0258b05ff5054ee 155 Gene3D G3DSA:3.90.79.10 1 153 1.9E-41 T 12-10-2018 BAMF_1585 12b068d4248c7e7935c1fcf2f3c5c13a 306 SUPERFAMILY SSF51735 15 162 2.13E-16 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1585 12b068d4248c7e7935c1fcf2f3c5c13a 306 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 15 305 9.1E-69 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 BAMF_1585 12b068d4248c7e7935c1fcf2f3c5c13a 306 Pfam PF02558 Ketopantoate reductase PanE/ApbA 16 157 2.3E-25 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain BAMF_1585 12b068d4248c7e7935c1fcf2f3c5c13a 306 Gene3D G3DSA:3.40.50.720 13 183 1.5E-55 T 12-10-2018 BAMF_1585 12b068d4248c7e7935c1fcf2f3c5c13a 306 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 191 304 2.3E-27 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain BAMF_1585 12b068d4248c7e7935c1fcf2f3c5c13a 306 SUPERFAMILY SSF48179 184 304 2.28E-25 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_1585 12b068d4248c7e7935c1fcf2f3c5c13a 306 Gene3D G3DSA:1.10.1040.10 184 306 1.9E-42 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BAMF_1550 6b8c52b1bf587c5f408529ea8e8ad869 62 Pfam PF17259 Family of unknown function (DUF5325) 1 61 7.7E-26 T 12-10-2018 IPR035211 Protein of unknown function DUF5325 BAMF_1550 6b8c52b1bf587c5f408529ea8e8ad869 62 ProDom PD699877 YLAF TRANSMEMBRANE MEMBRANE BH2633 1 56 5.0E-11 T 12-10-2018 IPR035211 Protein of unknown function DUF5325 BAMF_1919 31288c0e59cfb6a9734edd60496a75ad 398 Pfam PF00067 Cytochrome P450 19 368 1.3E-33 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1919 31288c0e59cfb6a9734edd60496a75ad 398 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 341 350 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 BAMF_1919 31288c0e59cfb6a9734edd60496a75ad 398 Gene3D G3DSA:1.10.630.10 7 398 2.0E-119 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1919 31288c0e59cfb6a9734edd60496a75ad 398 PRINTS PR00359 B-class P450 signature 90 101 6.5E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1919 31288c0e59cfb6a9734edd60496a75ad 398 PRINTS PR00359 B-class P450 signature 153 168 6.5E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1919 31288c0e59cfb6a9734edd60496a75ad 398 PRINTS PR00359 B-class P450 signature 290 317 6.5E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1919 31288c0e59cfb6a9734edd60496a75ad 398 PRINTS PR00359 B-class P450 signature 273 284 6.5E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1919 31288c0e59cfb6a9734edd60496a75ad 398 PRINTS PR00359 B-class P450 signature 318 333 6.5E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1919 31288c0e59cfb6a9734edd60496a75ad 398 PRINTS PR00359 B-class P450 signature 136 152 6.5E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1919 31288c0e59cfb6a9734edd60496a75ad 398 PRINTS PR00359 B-class P450 signature 348 359 6.5E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1919 31288c0e59cfb6a9734edd60496a75ad 398 PRINTS PR00359 B-class P450 signature 339 348 6.5E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1919 31288c0e59cfb6a9734edd60496a75ad 398 PRINTS PR00359 B-class P450 signature 196 218 6.5E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1919 31288c0e59cfb6a9734edd60496a75ad 398 SUPERFAMILY SSF48264 8 397 1.57E-88 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_0296 08d990250e2d33aa321b982519839b30 411 Pfam PF13556 PucR C-terminal helix-turn-helix domain 349 405 4.0E-18 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BAMF_0296 08d990250e2d33aa321b982519839b30 411 Gene3D G3DSA:1.10.10.2840 279 411 1.2E-17 T 12-10-2018 BAMF_0586 1603f9d5e41c1880ba8c4b31f79edb51 112 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 5 104 8.0E-19 T 12-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor BAMF_0586 1603f9d5e41c1880ba8c4b31f79edb51 112 Pfam PF05521 Phage head-tail joining protein 8 102 3.2E-15 T 12-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor BAMF_0586 1603f9d5e41c1880ba8c4b31f79edb51 112 Gene3D G3DSA:2.40.10.270 2 110 6.2E-48 T 12-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily BAMF_1159 276dd35b356e7e20488423450f2eb8bf 72 SUPERFAMILY SSF140500 1 49 3.14E-12 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 BAMF_1159 276dd35b356e7e20488423450f2eb8bf 72 Gene3D G3DSA:1.20.58.990 1 54 7.3E-11 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 BAMF_1159 276dd35b356e7e20488423450f2eb8bf 72 Pfam PF09388 Spo0E like sporulation regulatory protein 3 38 1.9E-10 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 BAMF_2997 37afc70ae76a200fc0b709009af1200b 289 Pfam PF00756 Putative esterase 31 258 1.3E-19 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 BAMF_2997 37afc70ae76a200fc0b709009af1200b 289 SUPERFAMILY SSF53474 14 278 4.12E-58 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2997 37afc70ae76a200fc0b709009af1200b 289 Gene3D G3DSA:3.40.50.1820 17 278 7.6E-72 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1779 e5e6821efff94014d59cd46d28fa8056 289 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 289 2.3E-24 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain BAMF_1779 e5e6821efff94014d59cd46d28fa8056 289 Gene3D G3DSA:3.30.70.250 120 188 5.6E-97 T 12-10-2018 BAMF_1779 e5e6821efff94014d59cd46d28fa8056 289 Gene3D G3DSA:3.40.366.10 4 276 5.6E-97 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 BAMF_1779 e5e6821efff94014d59cd46d28fa8056 289 SUPERFAMILY SSF52151 1 285 1.23E-62 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BAMF_1779 e5e6821efff94014d59cd46d28fa8056 289 SUPERFAMILY SSF55048 121 176 4.71E-13 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BAMF_1779 e5e6821efff94014d59cd46d28fa8056 289 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 282 1.7E-119 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BAMF_1779 e5e6821efff94014d59cd46d28fa8056 289 Pfam PF00698 Acyl transferase domain 3 275 3.4E-35 T 12-10-2018 IPR014043 Acyl transferase BAMF_1779 e5e6821efff94014d59cd46d28fa8056 289 PIRSF PIRSF000446 1 289 1.0E-104 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BAMF_1215 c8fc79910cc0bc9b20b8b4f841c83989 330 Gene3D G3DSA:3.40.50.620 5 324 3.9E-136 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_1215 c8fc79910cc0bc9b20b8b4f841c83989 330 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 325 7.7E-124 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BAMF_1215 c8fc79910cc0bc9b20b8b4f841c83989 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 193 203 9.0E-29 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BAMF_1215 c8fc79910cc0bc9b20b8b4f841c83989 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 9.0E-29 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BAMF_1215 c8fc79910cc0bc9b20b8b4f841c83989 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 65 84 9.0E-29 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BAMF_1215 c8fc79910cc0bc9b20b8b4f841c83989 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 9.0E-29 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BAMF_1215 c8fc79910cc0bc9b20b8b4f841c83989 330 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_1215 c8fc79910cc0bc9b20b8b4f841c83989 330 SUPERFAMILY SSF52374 4 325 8.91E-98 T 12-10-2018 BAMF_1215 c8fc79910cc0bc9b20b8b4f841c83989 330 Gene3D G3DSA:1.10.240.10 184 294 3.9E-136 T 12-10-2018 BAMF_1215 c8fc79910cc0bc9b20b8b4f841c83989 330 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 326 42.051 T 12-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 BAMF_1215 c8fc79910cc0bc9b20b8b4f841c83989 330 Pfam PF00579 tRNA synthetases class I (W and Y) 4 281 2.8E-82 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_3020 a6e220814b39ec5af3a2e821902b8272 284 Gene3D G3DSA:3.10.310.10 6 280 7.9E-110 T 12-10-2018 BAMF_3020 a6e220814b39ec5af3a2e821902b8272 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 4 284 37.566 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BAMF_3020 a6e220814b39ec5af3a2e821902b8272 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 5 283 4.0E-99 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BAMF_3020 a6e220814b39ec5af3a2e821902b8272 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 67 81 - T 12-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BAMF_3020 a6e220814b39ec5af3a2e821902b8272 284 Pfam PF01678 Diaminopimelate epimerase 161 276 3.0E-33 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BAMF_3020 a6e220814b39ec5af3a2e821902b8272 284 Pfam PF01678 Diaminopimelate epimerase 6 130 1.1E-32 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BAMF_3020 a6e220814b39ec5af3a2e821902b8272 284 SUPERFAMILY SSF54506 3 280 1.57E-49 T 12-10-2018 BAMF_3020 a6e220814b39ec5af3a2e821902b8272 284 Gene3D G3DSA:3.10.310.10 126 274 7.9E-110 T 12-10-2018 BAMF_2642 51cc291b46bcfe4b7b040f97ff6dd57d 195 Gene3D G3DSA:3.90.950.10 1 195 1.4E-78 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BAMF_2642 51cc291b46bcfe4b7b040f97ff6dd57d 195 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 195 49.77 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 BAMF_2642 51cc291b46bcfe4b7b040f97ff6dd57d 195 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 193 5.1E-73 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 BAMF_2642 51cc291b46bcfe4b7b040f97ff6dd57d 195 Pfam PF01725 Ham1 family 5 191 1.7E-62 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 BAMF_2642 51cc291b46bcfe4b7b040f97ff6dd57d 195 SUPERFAMILY SSF52972 3 193 2.88E-70 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BAMF_2194 c39b5748d9a8aeff057b869bb0bb464c 289 Gene3D G3DSA:1.10.101.10 23 106 1.3E-20 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BAMF_2194 c39b5748d9a8aeff057b869bb0bb464c 289 TIGRFAM TIGR02869 spore_SleB: spore cortex-lytic enzyme 28 288 1.6E-95 T 12-10-2018 IPR014224 Spore cortex-lytic enzyme SleB GO:0003824|GO:0009847 BAMF_2194 c39b5748d9a8aeff057b869bb0bb464c 289 Pfam PF07486 Cell Wall Hydrolase 190 288 3.1E-26 T 12-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 BAMF_2194 c39b5748d9a8aeff057b869bb0bb464c 289 Gene3D G3DSA:1.10.10.2520 174 253 6.3E-31 T 12-10-2018 BAMF_2194 c39b5748d9a8aeff057b869bb0bb464c 289 Pfam PF01471 Putative peptidoglycan binding domain 39 96 2.3E-15 T 12-10-2018 IPR002477 Peptidoglycan binding-like BAMF_2194 c39b5748d9a8aeff057b869bb0bb464c 289 Gene3D G3DSA:2.40.10.420 254 289 1.1E-21 T 12-10-2018 BAMF_2194 c39b5748d9a8aeff057b869bb0bb464c 289 SUPERFAMILY SSF47090 29 96 1.22E-18 T 12-10-2018 IPR036365 PGBD-like superfamily BAMF_1187 926a4ccb255b531942d83b5a048eaeb3 255 SUPERFAMILY SSF53474 21 255 1.91E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1187 926a4ccb255b531942d83b5a048eaeb3 255 Gene3D G3DSA:3.40.50.1820 1 255 5.7E-56 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1187 926a4ccb255b531942d83b5a048eaeb3 255 Pfam PF00326 Prolyl oligopeptidase family 99 255 2.0E-9 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BAMF_2076 7be5d28f7572867ace4e9f8bce6149a7 193 Gene3D G3DSA:3.40.30.10 20 193 1.2E-59 T 12-10-2018 BAMF_2076 7be5d28f7572867ace4e9f8bce6149a7 193 Pfam PF02630 SCO1/SenC 1 172 1.6E-56 T 12-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_2076 7be5d28f7572867ace4e9f8bce6149a7 193 SUPERFAMILY SSF52833 28 189 7.68E-44 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_3581 57f9fd57bc0b97cea73dec2eeb8cb78c 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 5.0E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3581 57f9fd57bc0b97cea73dec2eeb8cb78c 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 5.0E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3581 57f9fd57bc0b97cea73dec2eeb8cb78c 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 5.0E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3581 57f9fd57bc0b97cea73dec2eeb8cb78c 139 SUPERFAMILY SSF46785 16 138 2.71E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3581 57f9fd57bc0b97cea73dec2eeb8cb78c 139 Pfam PF01047 MarR family 40 92 5.9E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3581 57f9fd57bc0b97cea73dec2eeb8cb78c 139 SMART SM00347 27 127 2.8E-22 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3581 57f9fd57bc0b97cea73dec2eeb8cb78c 139 Gene3D G3DSA:1.10.10.10 2 139 8.9E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3861 b6a8bbb1aee1ea6164f45bea0fe2f093 138 SUPERFAMILY SSF54593 13 134 1.48E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_3861 b6a8bbb1aee1ea6164f45bea0fe2f093 138 Gene3D G3DSA:3.10.180.10 2 138 2.2E-53 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_3861 b6a8bbb1aee1ea6164f45bea0fe2f093 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 130 8.6E-9 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BAMF_1629 32fbdd3b816c2c5adb05e39f9a2279ad 354 Pfam PF01384 Phosphate transporter family 16 305 2.2E-44 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 BAMF_0528 4e3696f98252f45dda2d27859f9ff694 158 Gene3D G3DSA:3.40.50.300 2 152 2.6E-42 T 12-10-2018 BAMF_0528 4e3696f98252f45dda2d27859f9ff694 158 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 138 2.1E-49 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 BAMF_0528 4e3696f98252f45dda2d27859f9ff694 158 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 132 2.9E-38 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 BAMF_0528 4e3696f98252f45dda2d27859f9ff694 158 SUPERFAMILY SSF52540 26 114 2.78E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0655 313dec3748e8bbe4665b83c59e90c0e6 229 TIGRFAM TIGR01768 GGGP-family: geranylgeranylglyceryl phosphate synthase family protein 9 223 2.6E-71 T 12-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 BAMF_0655 313dec3748e8bbe4665b83c59e90c0e6 229 Gene3D G3DSA:3.20.20.390 1 229 4.6E-93 T 12-10-2018 IPR038597 GGGP/HepGP synthase superfamily BAMF_0655 313dec3748e8bbe4665b83c59e90c0e6 229 SUPERFAMILY SSF51395 4 222 2.75E-51 T 12-10-2018 BAMF_0655 313dec3748e8bbe4665b83c59e90c0e6 229 Pfam PF01884 PcrB family 2 226 3.0E-97 T 12-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 BAMF_0655 313dec3748e8bbe4665b83c59e90c0e6 229 Hamap MF_00112 Geranylgeranylglyceryl phosphate synthase [pcrB]. 3 226 29.096 T 12-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 Pfam PF02824 TGS domain 5 64 8.5E-15 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 75 640 1.4E-244 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 472 500 3.1E-47 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 366 389 3.1E-47 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 515 528 3.1E-47 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 333 361 3.1E-47 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 542 554 3.1E-47 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 Gene3D G3DSA:3.30.980.10 72 224 5.8E-66 T 12-10-2018 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 Gene3D G3DSA:3.30.930.10 227 540 6.7E-115 T 12-10-2018 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 Gene3D G3DSA:3.30.54.20 133 189 5.8E-66 T 12-10-2018 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 SMART SM00863 172 221 2.8E-25 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 SUPERFAMILY SSF81271 5 64 1.26E-16 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 327 536 1.7E-34 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 221 1.1E-16 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 Gene3D G3DSA:3.40.50.800 541 643 1.5E-34 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 Gene3D G3DSA:3.10.20.30 2 66 1.0E-26 T 12-10-2018 IPR012675 Beta-grasp domain superfamily BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 SUPERFAMILY SSF55186 68 243 4.84E-66 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 Pfam PF03129 Anticodon binding domain 549 636 1.6E-25 T 12-10-2018 IPR004154 Anticodon-binding BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 SUPERFAMILY SSF55681 245 534 2.39E-95 T 12-10-2018 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 SUPERFAMILY SSF52954 535 638 5.29E-31 T 12-10-2018 BAMF_2698 afa7df4278ebede60f55e5d391aae847 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 69 643 35.179 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BAMF_2785 c45ba55a4bb60a4edb9fc84c2b4de418 357 Pfam PF05343 M42 glutamyl aminopeptidase 46 337 5.5E-111 T 12-10-2018 IPR008007 Peptidase M42 BAMF_2785 c45ba55a4bb60a4edb9fc84c2b4de418 357 SUPERFAMILY SSF101821 71 180 5.34E-31 T 12-10-2018 BAMF_2785 c45ba55a4bb60a4edb9fc84c2b4de418 357 SUPERFAMILY SSF53187 5 351 9.43E-69 T 12-10-2018 BAMF_2785 c45ba55a4bb60a4edb9fc84c2b4de418 357 Gene3D G3DSA:2.40.30.40 75 162 2.2E-115 T 12-10-2018 IPR023367 Peptidase M42, domain 2 BAMF_2785 c45ba55a4bb60a4edb9fc84c2b4de418 357 Gene3D G3DSA:3.40.630.10 11 339 2.2E-115 T 12-10-2018 BAMF_2785 c45ba55a4bb60a4edb9fc84c2b4de418 357 PIRSF PIRSF001123 2 356 4.8E-144 T 12-10-2018 IPR008007 Peptidase M42 BAMF_1599 1fe67022ee61078f89ab45121106bf14 437 Gene3D G3DSA:3.30.420.40 195 349 1.1E-110 T 12-10-2018 BAMF_1599 1fe67022ee61078f89ab45121106bf14 437 SMART SM00842 7 194 7.4E-90 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 BAMF_1599 1fe67022ee61078f89ab45121106bf14 437 Gene3D G3DSA:3.30.420.40 10 363 1.1E-110 T 12-10-2018 BAMF_1599 1fe67022ee61078f89ab45121106bf14 437 PIRSF PIRSF003101 1 436 1.4E-148 T 12-10-2018 IPR020823 Cell division protein FtsA BAMF_1599 1fe67022ee61078f89ab45121106bf14 437 Gene3D G3DSA:3.90.640.10 233 298 1.1E-110 T 12-10-2018 BAMF_1599 1fe67022ee61078f89ab45121106bf14 437 SUPERFAMILY SSF53067 5 195 2.29E-58 T 12-10-2018 BAMF_1599 1fe67022ee61078f89ab45121106bf14 437 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 369 7.5E-132 T 12-10-2018 IPR020823 Cell division protein FtsA BAMF_1599 1fe67022ee61078f89ab45121106bf14 437 Pfam PF02491 SHS2 domain inserted in FTSA 81 160 4.5E-23 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 BAMF_1599 1fe67022ee61078f89ab45121106bf14 437 Pfam PF14450 Cell division protein FtsA 9 187 1.2E-9 T 12-10-2018 BAMF_1599 1fe67022ee61078f89ab45121106bf14 437 Pfam PF14450 Cell division protein FtsA 205 366 5.4E-25 T 12-10-2018 BAMF_1599 1fe67022ee61078f89ab45121106bf14 437 SUPERFAMILY SSF53067 197 368 4.03E-42 T 12-10-2018 BAMF_1599 1fe67022ee61078f89ab45121106bf14 437 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 436 30.004 T 12-10-2018 IPR020823 Cell division protein FtsA BAMF_1599 1fe67022ee61078f89ab45121106bf14 437 Gene3D G3DSA:3.30.1490.110 83 167 1.1E-110 T 12-10-2018 BAMF_1554 67f22be8b98114987c63be9651c4fbdc 207 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 3 161 2.1E-45 T 12-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 BAMF_1554 67f22be8b98114987c63be9651c4fbdc 207 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 29 159 2.4E-17 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like BAMF_3752 3eb378ff3fe63bcb3232e85dfb082331 485 SUPERFAMILY SSF55874 24 192 2.88E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3752 3eb378ff3fe63bcb3232e85dfb082331 485 Gene3D G3DSA:3.30.565.10 18 214 1.3E-21 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3752 3eb378ff3fe63bcb3232e85dfb082331 485 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 147 9.8E-33 T 12-10-2018 BAMF_1724 c09ebfadbc831ebcb08d5a3282aaa122 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.895 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 BAMF_1724 c09ebfadbc831ebcb08d5a3282aaa122 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 6.2E-80 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 BAMF_1724 c09ebfadbc831ebcb08d5a3282aaa122 185 Gene3D G3DSA:3.30.1360.40 31 105 2.6E-70 T 12-10-2018 BAMF_1724 c09ebfadbc831ebcb08d5a3282aaa122 185 SUPERFAMILY SSF55194 3 185 1.31E-72 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 BAMF_1724 c09ebfadbc831ebcb08d5a3282aaa122 185 Gene3D G3DSA:1.10.132.20 12 182 2.6E-70 T 12-10-2018 BAMF_1724 c09ebfadbc831ebcb08d5a3282aaa122 185 Pfam PF01765 Ribosome recycling factor 21 183 4.0E-65 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 BAMF_0756 ef1654de2808901deb8f121bbe1ad6be 253 Pfam PF01487 Type I 3-dehydroquinase 20 246 2.3E-71 T 12-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BAMF_0756 ef1654de2808901deb8f121bbe1ad6be 253 Gene3D G3DSA:3.20.20.70 1 252 5.4E-93 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_0756 ef1654de2808901deb8f121bbe1ad6be 253 SUPERFAMILY SSF51569 1 250 4.76E-80 T 12-10-2018 BAMF_0756 ef1654de2808901deb8f121bbe1ad6be 253 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 17 249 41.407 T 12-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BAMF_0756 ef1654de2808901deb8f121bbe1ad6be 253 ProSitePatterns PS01028 Dehydroquinase class I active site. 114 144 - T 12-10-2018 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BAMF_0756 ef1654de2808901deb8f121bbe1ad6be 253 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 17 245 2.0E-73 T 12-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BAMF_0317 b85631c1f709748426f43f221349b62b 224 Gene3D G3DSA:3.90.470.20 14 220 6.0E-80 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BAMF_0317 b85631c1f709748426f43f221349b62b 224 SUPERFAMILY SSF56214 1 96 6.38E-28 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BAMF_0317 b85631c1f709748426f43f221349b62b 224 Gene3D G3DSA:3.90.470.20 104 206 6.0E-80 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BAMF_0317 b85631c1f709748426f43f221349b62b 224 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 101 224 1.2E-34 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BAMF_0317 b85631c1f709748426f43f221349b62b 224 SUPERFAMILY SSF56214 103 222 1.83E-31 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BAMF_0317 b85631c1f709748426f43f221349b62b 224 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 103 205 2.9E-19 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BAMF_1765 06de5748749e210dc3a0fc4480340105 416 SUPERFAMILY SSF53218 6 210 2.22E-41 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily BAMF_1765 06de5748749e210dc3a0fc4480340105 416 PIRSF PIRSF006728 4 416 5.6E-166 T 12-10-2018 IPR008135 Competence-induced protein CinA BAMF_1765 06de5748749e210dc3a0fc4480340105 416 Gene3D G3DSA:3.90.950.20 257 415 1.2E-51 T 12-10-2018 IPR036653 CinA-like, C-terminal BAMF_1765 06de5748749e210dc3a0fc4480340105 416 Gene3D G3DSA:3.40.980.10 4 173 1.8E-51 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily BAMF_1765 06de5748749e210dc3a0fc4480340105 416 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 416 170.28 T 12-10-2018 IPR008135 Competence-induced protein CinA BAMF_1765 06de5748749e210dc3a0fc4480340105 416 Pfam PF02464 Competence-damaged protein 261 413 8.0E-51 T 12-10-2018 IPR008136 CinA, C-terminal BAMF_1765 06de5748749e210dc3a0fc4480340105 416 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 5 416 8.1E-202 T 12-10-2018 IPR008135 Competence-induced protein CinA BAMF_1765 06de5748749e210dc3a0fc4480340105 416 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 6 169 1.7E-39 T 12-10-2018 IPR001453 MoaB/Mog domain BAMF_1765 06de5748749e210dc3a0fc4480340105 416 Pfam PF00994 Probable molybdopterin binding domain 8 172 2.0E-35 T 12-10-2018 IPR001453 MoaB/Mog domain BAMF_1765 06de5748749e210dc3a0fc4480340105 416 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 267 413 9.3E-54 T 12-10-2018 IPR008136 CinA, C-terminal BAMF_1765 06de5748749e210dc3a0fc4480340105 416 SMART SM00852 8 175 1.9E-43 T 12-10-2018 IPR001453 MoaB/Mog domain BAMF_1765 06de5748749e210dc3a0fc4480340105 416 SUPERFAMILY SSF142433 254 413 2.62E-47 T 12-10-2018 IPR036653 CinA-like, C-terminal BAMF_0080 3bc9e4ef9d99bfd9f923e5503a699201 333 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 322 2.6E-141 T 12-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 BAMF_0080 3bc9e4ef9d99bfd9f923e5503a699201 333 PIRSF PIRSF006621 1 330 2.4E-110 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BAMF_0080 3bc9e4ef9d99bfd9f923e5503a699201 333 SUPERFAMILY SSF51395 11 322 1.19E-90 T 12-10-2018 BAMF_0080 3bc9e4ef9d99bfd9f923e5503a699201 333 Gene3D G3DSA:1.10.1200.80 254 331 4.4E-19 T 12-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 BAMF_0080 3bc9e4ef9d99bfd9f923e5503a699201 333 Pfam PF01207 Dihydrouridine synthase (Dus) 14 320 5.3E-113 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BAMF_0080 3bc9e4ef9d99bfd9f923e5503a699201 333 Gene3D G3DSA:3.20.20.70 7 251 4.0E-83 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_0080 3bc9e4ef9d99bfd9f923e5503a699201 333 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BAMF_1883 f26fc46d642144ec53c3eb5f2ce67795 123 Gene3D G3DSA:2.60.40.790 28 110 3.1E-6 T 12-10-2018 IPR008978 HSP20-like chaperone BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 SMART SM00287 256 318 1.2E-14 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 SMART SM00287 178 240 1.6E-16 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 SMART SM00287 102 164 1.0E-12 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 SMART SM00287 29 91 1.5E-14 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 Gene3D G3DSA:2.30.30.40 99 164 1.3E-17 T 12-10-2018 BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 PIRSF PIRSF037846 1 209 1.7E-66 T 12-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 PIRSF PIRSF037846 167 516 1.8E-143 T 12-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 Pfam PF08239 Bacterial SH3 domain 39 87 4.5E-8 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 Pfam PF08239 Bacterial SH3 domain 112 160 6.2E-13 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 Pfam PF08239 Bacterial SH3 domain 186 236 1.5E-14 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 Pfam PF08239 Bacterial SH3 domain 264 315 2.5E-9 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 SMART SM00646 403 512 4.4E-32 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 SUPERFAMILY SSF53187 341 515 4.08E-50 T 12-10-2018 BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 Gene3D G3DSA:3.40.630.40 340 517 2.4E-51 T 12-10-2018 BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 Gene3D G3DSA:2.30.30.40 23 92 1.1E-15 T 12-10-2018 BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 Gene3D G3DSA:2.30.30.40 252 320 7.8E-13 T 12-10-2018 BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 Gene3D G3DSA:2.30.30.40 170 240 8.2E-17 T 12-10-2018 BAMF_2568 a5b557d2b487bf8fb75fc5c8a7f1708c 517 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 344 512 4.7E-43 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BAMF_1416 c6333c7a3034c83d72367001d630dccf 110 Pfam PF13411 MerR HTH family regulatory protein 15 76 6.3E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_1416 c6333c7a3034c83d72367001d630dccf 110 Gene3D G3DSA:1.10.1660.10 6 88 5.4E-23 T 12-10-2018 BAMF_1416 c6333c7a3034c83d72367001d630dccf 110 SUPERFAMILY SSF46955 15 103 1.74E-18 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BAMF_1416 c6333c7a3034c83d72367001d630dccf 110 SMART SM00422 14 82 3.5E-24 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_1416 c6333c7a3034c83d72367001d630dccf 110 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 26 1.5E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_1416 c6333c7a3034c83d72367001d630dccf 110 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 26 39 1.5E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_1416 c6333c7a3034c83d72367001d630dccf 110 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 49 69 1.5E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_2075 2919a1a306cd8fea2c98f7f3e3313cc4 251 Gene3D G3DSA:3.40.50.1110 18 246 3.5E-36 T 12-10-2018 IPR036514 SGNH hydrolase superfamily BAMF_2075 2919a1a306cd8fea2c98f7f3e3313cc4 251 SUPERFAMILY SSF52266 34 245 6.2E-36 T 12-10-2018 BAMF_2075 2919a1a306cd8fea2c98f7f3e3313cc4 251 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 41 234 5.5E-26 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain BAMF_1020 57fd03f096efbf64231411acd20c6747 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 2.1E-31 T 12-10-2018 BAMF_1020 57fd03f096efbf64231411acd20c6747 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 7.7E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_1020 57fd03f096efbf64231411acd20c6747 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 7.7E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_1020 57fd03f096efbf64231411acd20c6747 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 7.7E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_1020 57fd03f096efbf64231411acd20c6747 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 7.7E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_1020 57fd03f096efbf64231411acd20c6747 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 7.7E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_1020 57fd03f096efbf64231411acd20c6747 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 58 184 6.0E-18 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_1020 57fd03f096efbf64231411acd20c6747 229 Gene3D G3DSA:1.10.150.240 15 84 1.2E-52 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BAMF_1020 57fd03f096efbf64231411acd20c6747 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 77 178 1.6E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_1020 57fd03f096efbf64231411acd20c6747 229 SUPERFAMILY SSF56784 2 207 1.65E-47 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_1020 57fd03f096efbf64231411acd20c6747 229 Gene3D G3DSA:3.40.50.1000 3 202 1.2E-52 T 12-10-2018 IPR023214 HAD superfamily BAMF_0074 5f2276d6913b94ac9c211cab00a9303d 470 Gene3D G3DSA:3.60.120.10 2 470 7.4E-161 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BAMF_0074 5f2276d6913b94ac9c211cab00a9303d 470 SUPERFAMILY SSF56322 15 463 3.92E-145 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BAMF_0074 5f2276d6913b94ac9c211cab00a9303d 470 Pfam PF00425 chorismate binding enzyme 200 453 9.2E-98 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BAMF_0074 5f2276d6913b94ac9c211cab00a9303d 470 Pfam PF04715 Anthranilate synthase component I, N terminal region 18 150 5.6E-29 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_0074 5f2276d6913b94ac9c211cab00a9303d 470 TIGRFAM TIGR01824 PabB-clade2: aminodeoxychorismate synthase, component I 100 456 3.0E-123 T 12-10-2018 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I BAMF_0074 5f2276d6913b94ac9c211cab00a9303d 470 PRINTS PR00095 Anthranilate synthase component I signature 301 314 1.7E-19 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_0074 5f2276d6913b94ac9c211cab00a9303d 470 PRINTS PR00095 Anthranilate synthase component I signature 395 409 1.7E-19 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_0074 5f2276d6913b94ac9c211cab00a9303d 470 PRINTS PR00095 Anthranilate synthase component I signature 410 424 1.7E-19 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_0074 5f2276d6913b94ac9c211cab00a9303d 470 PRINTS PR00095 Anthranilate synthase component I signature 315 328 1.7E-19 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_1261 80e71ca5f3834d9dcd4be085d4afc02c 245 SUPERFAMILY SSF52540 3 224 1.27E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1261 80e71ca5f3834d9dcd4be085d4afc02c 245 Gene3D G3DSA:3.40.50.300 1 242 2.0E-70 T 12-10-2018 BAMF_1261 80e71ca5f3834d9dcd4be085d4afc02c 245 Pfam PF00005 ABC transporter 20 162 7.5E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1261 80e71ca5f3834d9dcd4be085d4afc02c 245 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_1261 80e71ca5f3834d9dcd4be085d4afc02c 245 SMART SM00382 28 210 3.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3348 bb12fb9ba13d4e8c6193684ebe858994 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 58 1.0E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_3348 bb12fb9ba13d4e8c6193684ebe858994 191 SUPERFAMILY SSF46689 7 72 4.98E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_3348 bb12fb9ba13d4e8c6193684ebe858994 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.5E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_3348 bb12fb9ba13d4e8c6193684ebe858994 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.5E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_3348 bb12fb9ba13d4e8c6193684ebe858994 191 Gene3D G3DSA:1.10.357.10 1 191 2.2E-61 T 12-10-2018 BAMF_3348 bb12fb9ba13d4e8c6193684ebe858994 191 SUPERFAMILY SSF48498 79 185 1.11E-23 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BAMF_3480 a2cd16e81924e2e827291b3589100334 141 SUPERFAMILY SSF54637 1 138 2.7E-48 T 12-10-2018 IPR029069 HotDog domain superfamily BAMF_3480 a2cd16e81924e2e827291b3589100334 141 Pfam PF07977 FabA-like domain 11 134 5.8E-37 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BAMF_3480 a2cd16e81924e2e827291b3589100334 141 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 141 34.624 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BAMF_3480 a2cd16e81924e2e827291b3589100334 141 Gene3D G3DSA:3.10.129.10 1 139 8.9E-60 T 12-10-2018 BAMF_3480 a2cd16e81924e2e827291b3589100334 141 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 138 6.8E-58 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BAMF_3320 146057674493fb4ee011774a5e3e913e 248 Pfam PF00797 N-acetyltransferase 21 243 4.3E-47 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 BAMF_3320 146057674493fb4ee011774a5e3e913e 248 Gene3D G3DSA:3.30.2140.20 1 248 6.0E-67 T 12-10-2018 BAMF_3320 146057674493fb4ee011774a5e3e913e 248 SUPERFAMILY SSF54001 2 247 4.91E-57 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BAMF_3384 25f687717e941b987a4fa9bcbe290f14 88 Pfam PF04316 Anti-sigma-28 factor, FlgM 32 83 5.9E-17 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal BAMF_3384 25f687717e941b987a4fa9bcbe290f14 88 SUPERFAMILY SSF101498 1 85 2.09E-19 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily BAMF_3384 25f687717e941b987a4fa9bcbe290f14 88 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 86 3.9E-19 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 BAMF_0240 f1fef8e9bb1622c113235a7460419e12 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 131 145 - T 12-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 BAMF_0240 f1fef8e9bb1622c113235a7460419e12 215 PIRSF PIRSF015592 2 213 4.0E-86 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BAMF_0240 f1fef8e9bb1622c113235a7460419e12 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 163 175 1.2E-51 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BAMF_0240 f1fef8e9bb1622c113235a7460419e12 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 63 75 1.2E-51 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BAMF_0240 f1fef8e9bb1622c113235a7460419e12 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 81 101 1.2E-51 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BAMF_0240 f1fef8e9bb1622c113235a7460419e12 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 133 149 1.2E-51 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BAMF_0240 f1fef8e9bb1622c113235a7460419e12 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 5 28 1.2E-51 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 BAMF_0240 f1fef8e9bb1622c113235a7460419e12 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 3 199 43.274 T 12-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 BAMF_0240 f1fef8e9bb1622c113235a7460419e12 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 70 86 - T 12-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 BAMF_0240 f1fef8e9bb1622c113235a7460419e12 215 Pfam PF01470 Pyroglutamyl peptidase 3 201 2.0E-86 T 12-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 BAMF_0240 f1fef8e9bb1622c113235a7460419e12 215 SUPERFAMILY SSF53182 2 206 1.7E-71 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 BAMF_0240 f1fef8e9bb1622c113235a7460419e12 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 215 6.5E-95 T 12-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 BAMF_0240 f1fef8e9bb1622c113235a7460419e12 215 Gene3D G3DSA:3.40.630.20 1 215 8.1E-95 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 BAMF_0319 d53afd1dedce4f0789c47f9f0f386d92 247 SMART SM00382 26 223 7.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0319 d53afd1dedce4f0789c47f9f0f386d92 247 PIRSF PIRSF039085 1 245 2.4E-112 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BAMF_0319 d53afd1dedce4f0789c47f9f0f386d92 247 Pfam PF00005 ABC transporter 17 169 6.7E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0319 d53afd1dedce4f0789c47f9f0f386d92 247 Gene3D G3DSA:3.40.50.300 1 245 3.1E-74 T 12-10-2018 BAMF_0319 d53afd1dedce4f0789c47f9f0f386d92 247 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0319 d53afd1dedce4f0789c47f9f0f386d92 247 SUPERFAMILY SSF52540 1 239 1.96E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3843 512cfdcc206657ac7559b7c605b5f093 296 TIGRFAM TIGR01229 rocF_arginase: arginase 6 296 6.2E-121 T 12-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 BAMF_3843 512cfdcc206657ac7559b7c605b5f093 296 Pfam PF00491 Arginase family 4 291 1.3E-82 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BAMF_3843 512cfdcc206657ac7559b7c605b5f093 296 SUPERFAMILY SSF52768 4 294 4.32E-95 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily BAMF_3843 512cfdcc206657ac7559b7c605b5f093 296 ProSitePatterns PS01053 Arginase family signature. 221 242 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 BAMF_3843 512cfdcc206657ac7559b7c605b5f093 296 PIRSF PIRSF036979 1 294 2.0E-39 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BAMF_3843 512cfdcc206657ac7559b7c605b5f093 296 PRINTS PR00116 Arginase signature 218 247 9.2E-43 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BAMF_3843 512cfdcc206657ac7559b7c605b5f093 296 PRINTS PR00116 Arginase signature 93 108 9.2E-43 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BAMF_3843 512cfdcc206657ac7559b7c605b5f093 296 PRINTS PR00116 Arginase signature 253 267 9.2E-43 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BAMF_3843 512cfdcc206657ac7559b7c605b5f093 296 PRINTS PR00116 Arginase signature 116 143 9.2E-43 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BAMF_3843 512cfdcc206657ac7559b7c605b5f093 296 PRINTS PR00116 Arginase signature 170 188 9.2E-43 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BAMF_3843 512cfdcc206657ac7559b7c605b5f093 296 Gene3D G3DSA:3.40.800.10 2 296 4.4E-115 T 12-10-2018 BAMF_0914 35ea57e0f99d6e27050b332969f41892 384 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 2 372 9.5E-103 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_0914 35ea57e0f99d6e27050b332969f41892 384 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 242 264 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_0914 35ea57e0f99d6e27050b332969f41892 384 Pfam PF02867 Ribonucleotide reductase, barrel domain 3 368 6.2E-85 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_0914 35ea57e0f99d6e27050b332969f41892 384 SUPERFAMILY SSF51998 2 373 1.01E-110 T 12-10-2018 BAMF_0914 35ea57e0f99d6e27050b332969f41892 384 Gene3D G3DSA:3.20.70.20 23 370 3.0E-122 T 12-10-2018 BAMF_0914 35ea57e0f99d6e27050b332969f41892 384 Gene3D G3DSA:1.10.1650.20 2 22 3.0E-122 T 12-10-2018 BAMF_0914 35ea57e0f99d6e27050b332969f41892 384 PRINTS PR01183 Ribonucleotide reductase large chain signature 253 280 1.7E-21 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_0914 35ea57e0f99d6e27050b332969f41892 384 PRINTS PR01183 Ribonucleotide reductase large chain signature 171 194 1.7E-21 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_0914 35ea57e0f99d6e27050b332969f41892 384 PRINTS PR01183 Ribonucleotide reductase large chain signature 60 71 1.7E-21 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_0914 35ea57e0f99d6e27050b332969f41892 384 PRINTS PR01183 Ribonucleotide reductase large chain signature 143 165 1.7E-21 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_1563 1f26444e4c205b66b9343ab6c70c1aae 356 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 174 228 - T 12-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1563 1f26444e4c205b66b9343ab6c70c1aae 356 Gene3D G3DSA:2.60.40.2600 126 356 4.6E-63 T 12-10-2018 BAMF_1563 1f26444e4c205b66b9343ab6c70c1aae 356 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 31 244 2.6E-50 T 12-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1563 1f26444e4c205b66b9343ab6c70c1aae 356 Gene3D G3DSA:1.10.287.90 27 112 5.4E-22 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1563 1f26444e4c205b66b9343ab6c70c1aae 356 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 47 106 9.9E-7 T 12-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1563 1f26444e4c205b66b9343ab6c70c1aae 356 Pfam PF00034 Cytochrome c 259 352 1.5E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1563 1f26444e4c205b66b9343ab6c70c1aae 356 SUPERFAMILY SSF81464 14 113 2.78E-18 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1563 1f26444e4c205b66b9343ab6c70c1aae 356 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 154 233 2.3E-10 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_1563 1f26444e4c205b66b9343ab6c70c1aae 356 SUPERFAMILY SSF46626 256 353 9.74E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BAMF_1563 1f26444e4c205b66b9343ab6c70c1aae 356 SUPERFAMILY SSF49503 127 280 9.52E-38 T 12-10-2018 IPR008972 Cupredoxin BAMF_2014 7154a140af0814fb5e4f1e2e640dc3c4 403 Gene3D G3DSA:3.40.50.2000 217 380 7.2E-123 T 12-10-2018 BAMF_2014 7154a140af0814fb5e4f1e2e640dc3c4 403 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 229 370 2.2E-15 T 12-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 BAMF_2014 7154a140af0814fb5e4f1e2e640dc3c4 403 Gene3D G3DSA:3.40.50.2000 7 391 7.2E-123 T 12-10-2018 BAMF_2014 7154a140af0814fb5e4f1e2e640dc3c4 403 SUPERFAMILY SSF53756 1 392 2.03E-73 T 12-10-2018 BAMF_2014 7154a140af0814fb5e4f1e2e640dc3c4 403 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 8 393 1.9E-110 T 12-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 BAMF_0812 36bcbf3ed3fbe7f76928a0be6062c95f 349 Pfam PF07690 Major Facilitator Superfamily 1 299 6.9E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0812 36bcbf3ed3fbe7f76928a0be6062c95f 349 Gene3D G3DSA:1.20.1250.20 1 333 8.3E-41 T 12-10-2018 BAMF_0812 36bcbf3ed3fbe7f76928a0be6062c95f 349 SUPERFAMILY SSF103473 2 334 3.53E-46 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3066 6cc47a9d959214c846cf1d2b4b46050a 278 Pfam PF01374 Glycosyl hydrolase family 46 49 265 1.0E-75 T 12-10-2018 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 BAMF_3066 6cc47a9d959214c846cf1d2b4b46050a 278 Gene3D G3DSA:3.30.386.10 60 153 3.6E-78 T 12-10-2018 IPR023099 Glycoside hydrolase, family 46, N-terminal GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 BAMF_3066 6cc47a9d959214c846cf1d2b4b46050a 278 Gene3D G3DSA:1.20.141.10 44 268 3.6E-78 T 12-10-2018 BAMF_3066 6cc47a9d959214c846cf1d2b4b46050a 278 SUPERFAMILY SSF53955 19 277 1.12E-83 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BAMF_3066 6cc47a9d959214c846cf1d2b4b46050a 278 ProSitePatterns PS60000 Chitosanases families 46 and 80 active sites signature. 48 88 - T 12-10-2018 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 BAMF_3066 6cc47a9d959214c846cf1d2b4b46050a 278 PIRSF PIRSF036551 1 278 1.3E-98 T 12-10-2018 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 BAMF_0093 d3e4ca559417c172fd0c6168c79eb04f 217 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BAMF_0093 d3e4ca559417c172fd0c6168c79eb04f 217 Gene3D G3DSA:2.160.10.10 68 185 1.1E-36 T 12-10-2018 BAMF_0093 d3e4ca559417c172fd0c6168c79eb04f 217 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 167 9.9E-78 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 BAMF_0093 d3e4ca559417c172fd0c6168c79eb04f 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 73 109 0.0014 T 12-10-2018 IPR001451 Hexapeptide repeat BAMF_0093 d3e4ca559417c172fd0c6168c79eb04f 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 6.0E-6 T 12-10-2018 IPR001451 Hexapeptide repeat BAMF_0093 d3e4ca559417c172fd0c6168c79eb04f 217 Gene3D G3DSA:1.10.3130.10 2 67 8.2E-27 T 12-10-2018 BAMF_0093 d3e4ca559417c172fd0c6168c79eb04f 217 SUPERFAMILY SSF51161 3 169 3.6E-56 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily BAMF_0093 d3e4ca559417c172fd0c6168c79eb04f 217 Pfam PF06426 Serine acetyltransferase, N-terminal 5 36 1.9E-4 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 BAMF_0093 d3e4ca559417c172fd0c6168c79eb04f 217 PIRSF PIRSF000441 1 217 1.8E-83 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 BAMF_1612 d8f6ec0c801b2acfc8d9391bddd432fb 256 SMART SM00363 180 237 4.9E-14 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_1612 d8f6ec0c801b2acfc8d9391bddd432fb 256 Gene3D G3DSA:3.10.290.10 169 230 1.7E-10 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BAMF_1612 d8f6ec0c801b2acfc8d9391bddd432fb 256 Pfam PF01479 S4 domain 181 225 1.6E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_1612 d8f6ec0c801b2acfc8d9391bddd432fb 256 SUPERFAMILY SSF55174 36 250 3.89E-35 T 12-10-2018 BAMF_1612 d8f6ec0c801b2acfc8d9391bddd432fb 256 Gene3D G3DSA:3.30.70.330 79 164 1.5E-26 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BAMF_1612 d8f6ec0c801b2acfc8d9391bddd432fb 256 Gene3D G3DSA:3.30.1370.160 3 78 3.9E-30 T 12-10-2018 BAMF_1134 0e1f79dd921b0c118818e35ba27397fc 89 Pfam PF05901 Excalibur calcium-binding domain 34 88 3.0E-14 T 12-10-2018 IPR008613 Excalibur calcium-binding domain BAMF_1134 0e1f79dd921b0c118818e35ba27397fc 89 SMART SM00894 33 88 6.9E-7 T 12-10-2018 IPR008613 Excalibur calcium-binding domain BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 SUPERFAMILY SSF63520 312 404 1.24E-18 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 Pfam PF00874 PRD domain 207 293 2.3E-19 T 12-10-2018 IPR011608 PRD domain GO:0006355 BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 Pfam PF00874 PRD domain 316 403 2.8E-19 T 12-10-2018 IPR011608 PRD domain GO:0006355 BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 SUPERFAMILY SSF63520 197 294 3.01E-20 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 Gene3D G3DSA:3.40.930.10 541 682 9.6E-9 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 Gene3D G3DSA:1.10.10.10 1 62 3.8E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 Gene3D G3DSA:1.10.10.10 71 149 3.7E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 Gene3D G3DSA:3.40.50.2300 412 498 5.9E-14 T 12-10-2018 BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 Gene3D G3DSA:1.10.1790.10 309 405 2.1E-17 T 12-10-2018 BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 Gene3D G3DSA:1.10.1790.10 201 295 2.2E-19 T 12-10-2018 BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 Pfam PF08279 HTH domain 6 63 1.2E-7 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 SUPERFAMILY SSF46785 1 45 4.24E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 SUPERFAMILY SSF46785 87 152 3.15E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 SUPERFAMILY SSF52794 412 496 4.55E-13 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 414 490 6.6E-6 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 556 681 1.9E-8 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 SUPERFAMILY SSF55804 536 681 9.59E-15 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BAMF_0383 47f814646ac71cc09ed2756af1a1442c 694 Pfam PF05043 Mga helix-turn-helix domain 85 158 7.2E-6 T 12-10-2018 IPR007737 Mga helix-turn-helix domain BAMF_2696 af654d6e0dde65c001b24d62d889c29a 593 SUPERFAMILY SSF55874 433 578 9.69E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2696 af654d6e0dde65c001b24d62d889c29a 593 Gene3D G3DSA:3.30.450.40 216 365 2.3E-6 T 12-10-2018 IPR029016 GAF-like domain superfamily BAMF_2696 af654d6e0dde65c001b24d62d889c29a 593 Pfam PF06580 Histidine kinase 378 455 9.2E-24 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 BAMF_2696 af654d6e0dde65c001b24d62d889c29a 593 SUPERFAMILY SSF55781 244 364 1.12E-7 T 12-10-2018 BAMF_2696 af654d6e0dde65c001b24d62d889c29a 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 579 7.5E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2696 af654d6e0dde65c001b24d62d889c29a 593 Gene3D G3DSA:3.30.565.10 433 586 1.6E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2696 af654d6e0dde65c001b24d62d889c29a 593 SMART SM00387 468 580 5.9E-4 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2696 af654d6e0dde65c001b24d62d889c29a 593 Pfam PF07694 5TMR of 5TMR-LYT 25 207 4.4E-59 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 BAMF_2696 af654d6e0dde65c001b24d62d889c29a 593 Pfam PF13492 GAF domain 259 364 4.0E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 BAMF_2696 af654d6e0dde65c001b24d62d889c29a 593 SMART SM00065 238 373 2.6E-13 T 12-10-2018 IPR003018 GAF domain GO:0005515 BAMF_0196 b6d4a3dbf7f08f25e410fda032e09a94 395 Pfam PF12698 ABC-2 family transporter protein 19 386 4.2E-41 T 12-10-2018 BAMF_1663 5762ae6c307e74be0fb4377fe5748948 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 7 245 1.4E-111 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BAMF_1663 5762ae6c307e74be0fb4377fe5748948 246 Gene3D G3DSA:3.40.50.720 4 246 2.2E-94 T 12-10-2018 BAMF_1663 5762ae6c307e74be0fb4377fe5748948 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 2.4E-73 T 12-10-2018 BAMF_1663 5762ae6c307e74be0fb4377fe5748948 246 SUPERFAMILY SSF51735 4 246 1.38E-94 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1663 5762ae6c307e74be0fb4377fe5748948 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 9.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1663 5762ae6c307e74be0fb4377fe5748948 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 9.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1663 5762ae6c307e74be0fb4377fe5748948 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 9.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1663 5762ae6c307e74be0fb4377fe5748948 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.0E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1663 5762ae6c307e74be0fb4377fe5748948 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.0E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1663 5762ae6c307e74be0fb4377fe5748948 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.0E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1663 5762ae6c307e74be0fb4377fe5748948 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 5.0E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1663 5762ae6c307e74be0fb4377fe5748948 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.0E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1663 5762ae6c307e74be0fb4377fe5748948 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.0E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1663 5762ae6c307e74be0fb4377fe5748948 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 185 6.9E-6 T 12-10-2018 BAMF_3514 4b792aa50c487cb3dcd67cb7bd665e33 246 Gene3D G3DSA:3.30.2030.10 31 170 1.6E-45 T 12-10-2018 BAMF_3514 4b792aa50c487cb3dcd67cb7bd665e33 246 Pfam PF08680 TATA-box binding 48 246 1.7E-57 T 12-10-2018 IPR014794 TATA-box binding BAMF_3514 4b792aa50c487cb3dcd67cb7bd665e33 246 Gene3D G3DSA:3.30.360.40 171 246 1.1E-30 T 12-10-2018 BAMF_3514 4b792aa50c487cb3dcd67cb7bd665e33 246 SUPERFAMILY SSF143842 32 244 1.57E-72 T 12-10-2018 IPR036209 YwmB-like superfamily BAMF_2645 fc01883e8c870b8dafca66227a4fd83f 272 Gene3D G3DSA:3.40.50.1860 96 208 1.8E-98 T 12-10-2018 BAMF_2645 fc01883e8c870b8dafca66227a4fd83f 272 SUPERFAMILY SSF53681 5 108 1.44E-36 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_2645 fc01883e8c870b8dafca66227a4fd83f 272 SUPERFAMILY SSF53681 110 264 1.06E-37 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_2645 fc01883e8c870b8dafca66227a4fd83f 272 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 181 191 - T 12-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_2645 fc01883e8c870b8dafca66227a4fd83f 272 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 71 79 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_2645 fc01883e8c870b8dafca66227a4fd83f 272 Hamap MF_00258 Glutamate racemase [murI]. 4 257 40.992 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_2645 fc01883e8c870b8dafca66227a4fd83f 272 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 216 1.6E-39 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_2645 fc01883e8c870b8dafca66227a4fd83f 272 TIGRFAM TIGR00067 glut_race: glutamate racemase 6 255 2.7E-102 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_2645 fc01883e8c870b8dafca66227a4fd83f 272 Gene3D G3DSA:3.40.50.1860 5 243 1.8E-98 T 12-10-2018 BAMF_3209 189edcf2405d86e548a5668b09bd7588 270 Gene3D G3DSA:3.40.190.10 106 226 2.6E-81 T 12-10-2018 BAMF_3209 189edcf2405d86e548a5668b09bd7588 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 262 1.1E-45 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BAMF_3209 189edcf2405d86e548a5668b09bd7588 270 Gene3D G3DSA:3.40.190.10 39 262 2.6E-81 T 12-10-2018 BAMF_3209 189edcf2405d86e548a5668b09bd7588 270 SMART SM00062 37 264 1.0E-61 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BAMF_3209 189edcf2405d86e548a5668b09bd7588 270 SUPERFAMILY SSF53850 2 264 3.37E-45 T 12-10-2018 BAMF_2254 4b9caa179451106f1f5d7ffc6f4a33ba 475 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BAMF_2254 4b9caa179451106f1f5d7ffc6f4a33ba 475 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 2.1E-32 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_2254 4b9caa179451106f1f5d7ffc6f4a33ba 475 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 2.1E-32 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_2254 4b9caa179451106f1f5d7ffc6f4a33ba 475 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 2.1E-32 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_2254 4b9caa179451106f1f5d7ffc6f4a33ba 475 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 2.1E-32 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_2254 4b9caa179451106f1f5d7ffc6f4a33ba 475 Gene3D G3DSA:1.10.40.30 411 462 3.2E-21 T 12-10-2018 BAMF_2254 4b9caa179451106f1f5d7ffc6f4a33ba 475 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 1.8E-6 T 12-10-2018 BAMF_2254 4b9caa179451106f1f5d7ffc6f4a33ba 475 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 1.8E-6 T 12-10-2018 BAMF_2254 4b9caa179451106f1f5d7ffc6f4a33ba 475 Gene3D G3DSA:1.10.275.10 9 142 7.1E-57 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal BAMF_2254 4b9caa179451106f1f5d7ffc6f4a33ba 475 Pfam PF00206 Lyase 16 345 8.0E-117 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal BAMF_2254 4b9caa179451106f1f5d7ffc6f4a33ba 475 Gene3D G3DSA:1.20.200.10 143 410 7.7E-115 T 12-10-2018 BAMF_2254 4b9caa179451106f1f5d7ffc6f4a33ba 475 SUPERFAMILY SSF48557 8 465 9.27E-149 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 BAMF_2254 4b9caa179451106f1f5d7ffc6f4a33ba 475 Pfam PF10415 Fumarase C C-terminus 412 464 2.9E-19 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BAMF_2254 4b9caa179451106f1f5d7ffc6f4a33ba 475 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 9 472 2.5E-252 T 12-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 BAMF_0911 de7454715c8ecc91b0816f2c7ce65544 118 SUPERFAMILY SSF52218 1 114 9.78E-19 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_0911 de7454715c8ecc91b0816f2c7ce65544 118 Pfam PF07972 NrdI Flavodoxin like 3 109 2.0E-29 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI BAMF_0911 de7454715c8ecc91b0816f2c7ce65544 118 Gene3D G3DSA:3.40.50.360 1 117 4.0E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_0911 de7454715c8ecc91b0816f2c7ce65544 118 TIGRFAM TIGR00333 nrdI: nrdI protein 3 109 2.6E-27 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI BAMF_0911 de7454715c8ecc91b0816f2c7ce65544 118 PIRSF PIRSF005087 1 118 1.4E-34 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI BAMF_1544 e63d6dfc6b2042cde09bc0f8d8ca44d0 265 Pfam PF00459 Inositol monophosphatase family 5 254 3.3E-67 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BAMF_1544 e63d6dfc6b2042cde09bc0f8d8ca44d0 265 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site BAMF_1544 e63d6dfc6b2042cde09bc0f8d8ca44d0 265 SUPERFAMILY SSF56655 3 257 8.12E-79 T 12-10-2018 BAMF_1544 e63d6dfc6b2042cde09bc0f8d8ca44d0 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 6.0E-38 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BAMF_1544 e63d6dfc6b2042cde09bc0f8d8ca44d0 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 6.0E-38 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BAMF_1544 e63d6dfc6b2042cde09bc0f8d8ca44d0 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 6.0E-38 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BAMF_1544 e63d6dfc6b2042cde09bc0f8d8ca44d0 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 6.0E-38 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BAMF_1544 e63d6dfc6b2042cde09bc0f8d8ca44d0 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 6.0E-38 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BAMF_1544 e63d6dfc6b2042cde09bc0f8d8ca44d0 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 6.0E-38 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BAMF_1544 e63d6dfc6b2042cde09bc0f8d8ca44d0 265 Gene3D G3DSA:3.40.190.80 144 263 4.2E-34 T 12-10-2018 BAMF_1544 e63d6dfc6b2042cde09bc0f8d8ca44d0 265 Gene3D G3DSA:3.30.540.10 1 143 1.1E-45 T 12-10-2018 BAMF_1544 e63d6dfc6b2042cde09bc0f8d8ca44d0 265 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 12-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 BAMF_3297 8c4e96f6494a18eb654c2c2b6b49cdd4 174 SUPERFAMILY SSF55729 3 166 1.16E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_3297 8c4e96f6494a18eb654c2c2b6b49cdd4 174 Pfam PF00583 Acetyltransferase (GNAT) family 29 149 1.8E-19 T 12-10-2018 IPR000182 GNAT domain BAMF_3297 8c4e96f6494a18eb654c2c2b6b49cdd4 174 Gene3D G3DSA:3.40.630.30 3 174 1.2E-52 T 12-10-2018 BAMF_1822 e49902cf14e8490bac2b9feda2ecb255 152 SMART SM00860 22 135 3.3E-10 T 12-10-2018 IPR018958 Knr4/Smi1-like domain BAMF_1822 e49902cf14e8490bac2b9feda2ecb255 152 SUPERFAMILY SSF160631 1 150 3.66E-38 T 12-10-2018 BAMF_1822 e49902cf14e8490bac2b9feda2ecb255 152 Gene3D G3DSA:3.40.1580.10 1 152 2.0E-41 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily BAMF_1822 e49902cf14e8490bac2b9feda2ecb255 152 Pfam PF14567 SMI1-KNR4 cell-wall 7 137 2.4E-31 T 12-10-2018 BAMF_2471 c056bfdec7c52af75dca4e948bf3c9ab 418 SUPERFAMILY SSF103473 1 405 3.27E-38 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_2471 c056bfdec7c52af75dca4e948bf3c9ab 418 Pfam PF07690 Major Facilitator Superfamily 16 361 8.6E-19 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_2471 c056bfdec7c52af75dca4e948bf3c9ab 418 Gene3D G3DSA:1.20.1250.20 5 397 1.3E-31 T 12-10-2018 BAMF_1525 b79991869f84286160399b5bcd739c71 221 Gene3D G3DSA:3.30.70.1450 137 217 2.9E-28 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BAMF_1525 b79991869f84286160399b5bcd739c71 221 SUPERFAMILY SSF51735 4 134 1.34E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1525 b79991869f84286160399b5bcd739c71 221 Pfam PF02254 TrkA-N domain 5 120 3.3E-29 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BAMF_1525 b79991869f84286160399b5bcd739c71 221 SUPERFAMILY SSF116726 131 215 4.05E-21 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BAMF_1525 b79991869f84286160399b5bcd739c71 221 Gene3D G3DSA:3.40.50.720 1 136 1.5E-37 T 12-10-2018 BAMF_1525 b79991869f84286160399b5bcd739c71 221 Pfam PF02080 TrkA-C domain 149 216 4.5E-15 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BAMF_0743 6db0a6245c63c9a09a60148580c95060 80 Pfam PF10676 Spore germination protein gerPA/gerPF 1 71 1.5E-18 T 12-10-2018 IPR019618 Spore germination protein GerPA/GerPF BAMF_3566 3ce0786f2557e318511acd05cd31d245 207 SUPERFAMILY SSF51206 17 145 8.38E-31 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like BAMF_3566 3ce0786f2557e318511acd05cd31d245 207 Pfam PF00027 Cyclic nucleotide-binding domain 29 114 5.6E-16 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain BAMF_3566 3ce0786f2557e318511acd05cd31d245 207 Gene3D G3DSA:2.60.120.10 8 145 8.5E-29 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_3566 3ce0786f2557e318511acd05cd31d245 207 Gene3D G3DSA:1.10.10.10 146 192 2.5E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3566 3ce0786f2557e318511acd05cd31d245 207 SMART SM00100 9 129 3.8E-17 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain BAMF_1174 8870dd303e4f12bad09c1006e32d494a 146 SUPERFAMILY SSF55729 8 145 1.06E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_1174 8870dd303e4f12bad09c1006e32d494a 146 Gene3D G3DSA:3.40.630.30 1 146 2.8E-38 T 12-10-2018 BAMF_1174 8870dd303e4f12bad09c1006e32d494a 146 Pfam PF13673 Acetyltransferase (GNAT) domain 37 141 1.3E-8 T 12-10-2018 IPR000182 GNAT domain BAMF_1217 c91b3d342aadd2b60ad8d5fd0ecd863e 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 4.9E-42 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_1217 c91b3d342aadd2b60ad8d5fd0ecd863e 311 Gene3D G3DSA:1.10.3720.10 84 300 4.5E-22 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1217 c91b3d342aadd2b60ad8d5fd0ecd863e 311 SUPERFAMILY SSF161098 88 291 1.59E-19 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3508 31d1589d2d6cfb4358347952a96fb75a 344 Pfam PF06463 Molybdenum Cofactor Synthesis C 195 320 2.7E-38 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BAMF_3508 31d1589d2d6cfb4358347952a96fb75a 344 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 8 341 42.392 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BAMF_3508 31d1589d2d6cfb4358347952a96fb75a 344 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 9 341 2.6E-120 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BAMF_3508 31d1589d2d6cfb4358347952a96fb75a 344 SMART SM00729 17 226 3.7E-23 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BAMF_3508 31d1589d2d6cfb4358347952a96fb75a 344 Pfam PF04055 Radical SAM superfamily 21 186 6.9E-33 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BAMF_3508 31d1589d2d6cfb4358347952a96fb75a 344 Pfam PF13353 4Fe-4S single cluster domain 25 132 5.4E-7 T 12-10-2018 BAMF_3508 31d1589d2d6cfb4358347952a96fb75a 344 Gene3D G3DSA:3.20.20.70 5 341 9.5E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_3508 31d1589d2d6cfb4358347952a96fb75a 344 SUPERFAMILY SSF102114 10 301 3.66E-82 T 12-10-2018 BAMF_3508 31d1589d2d6cfb4358347952a96fb75a 344 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 23 34 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BAMF_1584 09cd96142895adce444a1000cfc16563 160 Hamap MF_00824 Uncharacterized N-acetyltransferase . 1 148 41.495 T 12-10-2018 IPR017274 Putative N-acetyltransferase YlbP BAMF_1584 09cd96142895adce444a1000cfc16563 160 PIRSF PIRSF037732 1 160 1.9E-89 T 12-10-2018 IPR017274 Putative N-acetyltransferase YlbP BAMF_1584 09cd96142895adce444a1000cfc16563 160 SUPERFAMILY SSF55729 25 143 5.65E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_1584 09cd96142895adce444a1000cfc16563 160 Gene3D G3DSA:3.40.630.30 1 160 8.2E-64 T 12-10-2018 BAMF_1584 09cd96142895adce444a1000cfc16563 160 Pfam PF00583 Acetyltransferase (GNAT) family 27 104 3.5E-6 T 12-10-2018 IPR000182 GNAT domain BAMF_1641 676e72f51068612a4aebbe17e72ee434 67 SUPERFAMILY SSF63562 1 65 1.57E-20 T 12-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BAMF_1641 676e72f51068612a4aebbe17e72ee434 67 SMART SM01409 8 61 2.0E-11 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BAMF_1641 676e72f51068612a4aebbe17e72ee434 67 Gene3D G3DSA:3.90.940.10 1 67 5.0E-16 T 12-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BAMF_1641 676e72f51068612a4aebbe17e72ee434 67 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 2.8E-28 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_1641 676e72f51068612a4aebbe17e72ee434 67 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 13.772 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BAMF_1641 676e72f51068612a4aebbe17e72ee434 67 Pfam PF01192 RNA polymerase Rpb6 9 61 1.0E-11 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BAMF_1505 94f0172ca2732e39e330b83413d801f0 171 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 7 160 6.2E-24 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 BAMF_1505 94f0172ca2732e39e330b83413d801f0 171 SUPERFAMILY SSF52540 6 160 8.21E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1505 94f0172ca2732e39e330b83413d801f0 171 Gene3D G3DSA:3.40.50.300 5 170 1.6E-51 T 12-10-2018 BAMF_1505 94f0172ca2732e39e330b83413d801f0 171 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 7 136 1.8E-26 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 Gene3D G3DSA:3.30.930.10 11 462 2.9E-257 T 12-10-2018 BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 SUPERFAMILY SSF55681 9 475 8.0E-101 T 12-10-2018 BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 7.7E-17 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 7.7E-17 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 7.7E-17 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 7.7E-17 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 563 6.4E-257 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 SUPERFAMILY SSF55826 218 386 3.92E-34 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 Pfam PF03129 Anticodon binding domain 474 563 1.4E-19 T 12-10-2018 IPR004154 Anticodon-binding BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 PIRSF PIRSF001535 1 564 5.4E-260 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 Gene3D G3DSA:3.90.960.10 240 386 2.9E-257 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 564 41.225 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 Pfam PF04073 Aminoacyl-tRNA editing domain 257 371 6.0E-30 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 456 6.7E-54 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 SUPERFAMILY SSF52954 460 563 2.78E-28 T 12-10-2018 BAMF_1729 9fb69b9981b6100c57050f7b6a5edc88 564 Gene3D G3DSA:3.40.50.800 4 550 2.9E-257 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily BAMF_0357 f55bc029d8ddc18bdef241d6d684c741 469 Pfam PF00155 Aminotransferase class I and II 115 405 2.4E-21 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_0357 f55bc029d8ddc18bdef241d6d684c741 469 SMART SM00345 19 78 3.5E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0357 f55bc029d8ddc18bdef241d6d684c741 469 Gene3D G3DSA:1.10.10.10 1 92 7.4E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0357 f55bc029d8ddc18bdef241d6d684c741 469 SUPERFAMILY SSF46785 15 87 2.72E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0357 f55bc029d8ddc18bdef241d6d684c741 469 SUPERFAMILY SSF53383 102 465 7.71E-69 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_0357 f55bc029d8ddc18bdef241d6d684c741 469 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 1.6E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0357 f55bc029d8ddc18bdef241d6d684c741 469 Gene3D G3DSA:3.40.640.10 93 461 2.2E-135 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_1369 623a94440602d6316731e85310842ee6 292 Gene3D G3DSA:3.40.80.10 1 153 3.0E-58 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_1369 623a94440602d6316731e85310842ee6 292 Gene3D G3DSA:1.10.101.10 219 292 3.1E-16 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BAMF_1369 623a94440602d6316731e85310842ee6 292 SUPERFAMILY SSF55846 1 153 2.88E-48 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_1369 623a94440602d6316731e85310842ee6 292 SMART SM00257 160 204 2.0E-21 T 12-10-2018 IPR018392 LysM domain BAMF_1369 623a94440602d6316731e85310842ee6 292 SUPERFAMILY SSF54106 158 204 4.45E-14 T 12-10-2018 BAMF_1369 623a94440602d6316731e85310842ee6 292 SMART SM00644 13 153 4.0E-36 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_1369 623a94440602d6316731e85310842ee6 292 Gene3D G3DSA:3.10.350.10 154 209 9.4E-23 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1369 623a94440602d6316731e85310842ee6 292 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 25 140 9.9E-25 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_1369 623a94440602d6316731e85310842ee6 292 SUPERFAMILY SSF47090 220 289 5.97E-16 T 12-10-2018 IPR036365 PGBD-like superfamily BAMF_1369 623a94440602d6316731e85310842ee6 292 Pfam PF01471 Putative peptidoglycan binding domain 226 287 3.3E-15 T 12-10-2018 IPR002477 Peptidoglycan binding-like BAMF_1369 623a94440602d6316731e85310842ee6 292 Pfam PF01476 LysM domain 161 203 2.7E-18 T 12-10-2018 IPR018392 LysM domain BAMF_2783 706a199de449b6b79080e4efa60aadeb 107 Gene3D G3DSA:3.40.30.10 1 104 4.4E-23 T 12-10-2018 BAMF_2783 706a199de449b6b79080e4efa60aadeb 107 SUPERFAMILY SSF52833 2 102 4.84E-27 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_2783 706a199de449b6b79080e4efa60aadeb 107 Pfam PF00085 Thioredoxin 7 101 3.9E-17 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 BAMF_2385 1a79ff7734e6b679eac9555d3d72758a 374 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 129 143 2.1E-7 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BAMF_2385 1a79ff7734e6b679eac9555d3d72758a 374 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 108 120 2.1E-7 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BAMF_2385 1a79ff7734e6b679eac9555d3d72758a 374 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 226 234 2.1E-7 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BAMF_2385 1a79ff7734e6b679eac9555d3d72758a 374 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 280 293 2.1E-7 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BAMF_2385 1a79ff7734e6b679eac9555d3d72758a 374 Pfam PF00246 Zinc carboxypeptidase 103 361 5.3E-27 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BAMF_2385 1a79ff7734e6b679eac9555d3d72758a 374 SMART SM00631 84 365 1.2E-28 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BAMF_2385 1a79ff7734e6b679eac9555d3d72758a 374 SUPERFAMILY SSF53187 84 369 5.29E-50 T 12-10-2018 BAMF_2385 1a79ff7734e6b679eac9555d3d72758a 374 Gene3D G3DSA:3.40.630.10 98 365 5.9E-46 T 12-10-2018 BAMF_1170 8a03016ed2048f5ea487693c40405019 182 SUPERFAMILY SSF109854 18 172 1.56E-27 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BAMF_1170 8a03016ed2048f5ea487693c40405019 182 Pfam PF05163 DinB family 16 177 8.4E-29 T 12-10-2018 IPR007837 DNA damage-inducible protein DinB BAMF_1170 8a03016ed2048f5ea487693c40405019 182 Gene3D G3DSA:1.20.120.450 11 176 5.5E-41 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BAMF_0400 716c00b7f1e4efa4a75557f9d5079541 573 SUPERFAMILY SSF52467 187 350 2.07E-46 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BAMF_0400 716c00b7f1e4efa4a75557f9d5079541 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 1.1E-45 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BAMF_0400 716c00b7f1e4efa4a75557f9d5079541 573 Gene3D G3DSA:3.40.50.970 348 570 4.4E-61 T 12-10-2018 BAMF_0400 716c00b7f1e4efa4a75557f9d5079541 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 381 526 5.6E-44 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BAMF_0400 716c00b7f1e4efa4a75557f9d5079541 573 SUPERFAMILY SSF52518 4 180 6.26E-44 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_0400 716c00b7f1e4efa4a75557f9d5079541 573 SUPERFAMILY SSF52518 358 557 8.65E-62 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_0400 716c00b7f1e4efa4a75557f9d5079541 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 321 1.3E-35 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BAMF_0400 716c00b7f1e4efa4a75557f9d5079541 573 Gene3D G3DSA:3.40.50.970 2 183 4.4E-58 T 12-10-2018 BAMF_0400 716c00b7f1e4efa4a75557f9d5079541 573 Gene3D G3DSA:3.40.50.1220 184 335 5.7E-48 T 12-10-2018 BAMF_0400 716c00b7f1e4efa4a75557f9d5079541 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 BAMF_1645 959466c904ececf9ad5e50dfa3542f9e 317 SUPERFAMILY SSF50486 205 310 3.14E-35 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 BAMF_1645 959466c904ececf9ad5e50dfa3542f9e 317 Gene3D G3DSA:3.40.50.170 1 206 2.0E-86 T 12-10-2018 BAMF_1645 959466c904ececf9ad5e50dfa3542f9e 317 Pfam PF02911 Formyl transferase, C-terminal domain 204 302 4.6E-33 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BAMF_1645 959466c904ececf9ad5e50dfa3542f9e 317 SUPERFAMILY SSF53328 3 206 2.35E-67 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BAMF_1645 959466c904ececf9ad5e50dfa3542f9e 317 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 305 37.26 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 BAMF_1645 959466c904ececf9ad5e50dfa3542f9e 317 Pfam PF00551 Formyl transferase 3 180 9.7E-39 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BAMF_1645 959466c904ececf9ad5e50dfa3542f9e 317 Gene3D G3DSA:3.10.25.10 207 313 4.2E-41 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BAMF_1645 959466c904ececf9ad5e50dfa3542f9e 317 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 309 7.1E-121 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 BAMF_1645 959466c904ececf9ad5e50dfa3542f9e 317 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BAMF_0342 d28b18eec22ed25da5e9b9926e8f03ec 227 SMART SM00862 149 224 1.2E-29 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_0342 d28b18eec22ed25da5e9b9926e8f03ec 227 SMART SM00448 1 111 7.0E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0342 d28b18eec22ed25da5e9b9926e8f03ec 227 Gene3D G3DSA:3.40.50.2300 1 128 1.5E-35 T 12-10-2018 BAMF_0342 d28b18eec22ed25da5e9b9926e8f03ec 227 SUPERFAMILY SSF52172 1 125 2.56E-39 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_0342 d28b18eec22ed25da5e9b9926e8f03ec 227 SUPERFAMILY SSF46894 127 225 2.78E-30 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_0342 d28b18eec22ed25da5e9b9926e8f03ec 227 Gene3D G3DSA:1.10.10.10 129 227 7.4E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0342 d28b18eec22ed25da5e9b9926e8f03ec 227 Pfam PF00072 Response regulator receiver domain 3 112 3.6E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0342 d28b18eec22ed25da5e9b9926e8f03ec 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 224 4.7E-29 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_2953 520145b3f30da7982cbd87d6c88f6931 235 SUPERFAMILY SSF52172 1 137 7.83E-37 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_2953 520145b3f30da7982cbd87d6c88f6931 235 Gene3D G3DSA:3.40.50.2300 1 149 2.6E-33 T 12-10-2018 BAMF_2953 520145b3f30da7982cbd87d6c88f6931 235 SMART SM00448 2 115 2.5E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2953 520145b3f30da7982cbd87d6c88f6931 235 PIRSF PIRSF006171 1 227 6.4E-85 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 BAMF_2953 520145b3f30da7982cbd87d6c88f6931 235 Pfam PF00072 Response regulator receiver domain 4 115 1.1E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3267 b78d7848e512b0c8fda3b8bfaeb021c8 241 SUPERFAMILY SSF100950 49 238 1.63E-38 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BAMF_3267 b78d7848e512b0c8fda3b8bfaeb021c8 241 Pfam PF02589 LUD domain 117 238 2.2E-28 T 12-10-2018 IPR003741 LUD domain BAMF_3267 b78d7848e512b0c8fda3b8bfaeb021c8 241 Gene3D G3DSA:3.40.50.10420 47 239 3.6E-36 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BAMF_3267 b78d7848e512b0c8fda3b8bfaeb021c8 241 Hamap MF_02104 Lactate utilization protein C [lutC]. 6 238 46.78 T 12-10-2018 IPR022823 Lactate utilization protein C BAMF_3600 0cf97c9d1228b3d1122146d5bc797d7c 65 SMART SM00530 4 59 2.5E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_3600 0cf97c9d1228b3d1122146d5bc797d7c 65 Gene3D G3DSA:1.10.260.40 1 65 6.8E-25 T 12-10-2018 BAMF_3600 0cf97c9d1228b3d1122146d5bc797d7c 65 SUPERFAMILY SSF47413 2 63 2.44E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_3600 0cf97c9d1228b3d1122146d5bc797d7c 65 Pfam PF01381 Helix-turn-helix 5 57 1.6E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_1574 84958a9c79438906e0aa3142e649ffb1 90 PIRSF PIRSF031653 1 90 2.6E-34 T 12-10-2018 IPR016979 Protein of unknown function DUF2129 BAMF_1574 84958a9c79438906e0aa3142e649ffb1 90 Hamap MF_01126 UPF0298 protein . 1 78 22.575 T 12-10-2018 IPR016979 Protein of unknown function DUF2129 BAMF_1574 84958a9c79438906e0aa3142e649ffb1 90 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 5 74 9.6E-31 T 12-10-2018 IPR016979 Protein of unknown function DUF2129 BAMF_3446 70b2d1659146eef004030e0e40d7d860 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.0E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3446 70b2d1659146eef004030e0e40d7d860 302 Gene3D G3DSA:3.40.190.10 91 286 4.4E-64 T 12-10-2018 BAMF_3446 70b2d1659146eef004030e0e40d7d860 302 SUPERFAMILY SSF46785 1 85 1.77E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3446 70b2d1659146eef004030e0e40d7d860 302 SUPERFAMILY SSF53850 91 291 5.85E-39 T 12-10-2018 BAMF_3446 70b2d1659146eef004030e0e40d7d860 302 Pfam PF03466 LysR substrate binding domain 88 290 5.8E-44 T 12-10-2018 IPR005119 LysR, substrate-binding BAMF_3446 70b2d1659146eef004030e0e40d7d860 302 Gene3D G3DSA:1.10.10.10 1 90 8.1E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3446 70b2d1659146eef004030e0e40d7d860 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3446 70b2d1659146eef004030e0e40d7d860 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3446 70b2d1659146eef004030e0e40d7d860 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3446 70b2d1659146eef004030e0e40d7d860 302 Gene3D G3DSA:3.40.190.10 162 267 4.4E-64 T 12-10-2018 BAMF_3221 6239da3b39b410245fc15bbc78aadb5d 143 SMART SM00530 7 63 5.9E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_3221 6239da3b39b410245fc15bbc78aadb5d 143 Pfam PF13560 Helix-turn-helix domain 4 62 3.9E-15 T 12-10-2018 BAMF_3221 6239da3b39b410245fc15bbc78aadb5d 143 SUPERFAMILY SSF47413 2 66 4.23E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_3221 6239da3b39b410245fc15bbc78aadb5d 143 Gene3D G3DSA:1.10.260.40 1 89 1.2E-18 T 12-10-2018 BAMF_3473 07a7d7176ef7ce56a5f4faf73a80498e 924 Pfam PF00271 Helicase conserved C-terminal domain 751 862 1.3E-20 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_3473 07a7d7176ef7ce56a5f4faf73a80498e 924 Pfam PF00176 SNF2 family N-terminal domain 461 734 2.4E-58 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 BAMF_3473 07a7d7176ef7ce56a5f4faf73a80498e 924 Gene3D G3DSA:1.20.120.850 688 911 1.6E-86 T 12-10-2018 BAMF_3473 07a7d7176ef7ce56a5f4faf73a80498e 924 SUPERFAMILY SSF52540 668 920 5.14E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3473 07a7d7176ef7ce56a5f4faf73a80498e 924 Gene3D G3DSA:3.40.50.300 674 876 1.6E-86 T 12-10-2018 BAMF_3473 07a7d7176ef7ce56a5f4faf73a80498e 924 SMART SM00490 779 862 6.7E-22 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_3473 07a7d7176ef7ce56a5f4faf73a80498e 924 SUPERFAMILY SSF52540 427 664 1.66E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3473 07a7d7176ef7ce56a5f4faf73a80498e 924 Gene3D G3DSA:3.40.50.10810 451 665 3.6E-67 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily BAMF_3473 07a7d7176ef7ce56a5f4faf73a80498e 924 SMART SM00487 446 636 7.0E-30 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_3473 07a7d7176ef7ce56a5f4faf73a80498e 924 Pfam PF12419 SNF2 Helicase protein 267 392 1.7E-35 T 12-10-2018 IPR022138 Helicase SWF/SNF-related BAMF_0218 36a498d2e088490612f3062d7cd1c4ed 356 Pfam PF01063 Amino-transferase class IV 69 311 3.1E-35 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BAMF_0218 36a498d2e088490612f3062d7cd1c4ed 356 Gene3D G3DSA:3.30.470.10 25 352 1.5E-133 T 12-10-2018 BAMF_0218 36a498d2e088490612f3062d7cd1c4ed 356 SUPERFAMILY SSF56752 3 353 3.79E-114 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BAMF_0218 36a498d2e088490612f3062d7cd1c4ed 356 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 44 356 1.3E-131 T 12-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 BAMF_0218 36a498d2e088490612f3062d7cd1c4ed 356 ProSitePatterns PS00770 Aminotransferases class-IV signature. 233 262 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 BAMF_0218 36a498d2e088490612f3062d7cd1c4ed 356 PIRSF PIRSF006468 2 356 3.9E-126 T 12-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 BAMF_0218 36a498d2e088490612f3062d7cd1c4ed 356 Gene3D G3DSA:3.20.10.10 171 339 1.5E-133 T 12-10-2018 BAMF_1862 92322c8d2b1db699466e099d35adaf96 805 Gene3D G3DSA:2.160.20.10 68 527 1.1E-126 T 12-10-2018 IPR012334 Pectin lyase fold BAMF_1862 92322c8d2b1db699466e099d35adaf96 805 Pfam PF12708 Pectate lyase superfamily protein 82 310 8.4E-19 T 12-10-2018 IPR024535 Pectate lyase superfamily protein BAMF_1862 92322c8d2b1db699466e099d35adaf96 805 SUPERFAMILY SSF51126 376 517 2.75E-5 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BAMF_1862 92322c8d2b1db699466e099d35adaf96 805 Gene3D G3DSA:4.10.80.40 692 734 3.3E-55 T 12-10-2018 BAMF_1862 92322c8d2b1db699466e099d35adaf96 805 Gene3D G3DSA:2.40.300.10 640 802 3.3E-55 T 12-10-2018 BAMF_1862 92322c8d2b1db699466e099d35adaf96 805 SMART SM00710 448 470 750.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_1862 92322c8d2b1db699466e099d35adaf96 805 SMART SM00710 419 440 20.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_1862 92322c8d2b1db699466e099d35adaf96 805 SMART SM00710 357 383 6000.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_1862 92322c8d2b1db699466e099d35adaf96 805 SMART SM00710 149 170 1400.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_1862 92322c8d2b1db699466e099d35adaf96 805 SMART SM00710 199 221 100.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_1862 92322c8d2b1db699466e099d35adaf96 805 SMART SM00710 237 259 26.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_1862 92322c8d2b1db699466e099d35adaf96 805 SMART SM00710 294 315 350.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_1862 92322c8d2b1db699466e099d35adaf96 805 SMART SM00710 260 292 1000.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_1862 92322c8d2b1db699466e099d35adaf96 805 SUPERFAMILY SSF51126 80 368 3.14E-35 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BAMF_1862 92322c8d2b1db699466e099d35adaf96 805 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 593 805 2.8E-73 T 12-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain BAMF_0769 f6289548fa52b7c352c490cbc42126ae 263 TIGRFAM TIGR02884 spore_pdaA: delta-lactam-biosynthetic de-N-acetylase 30 253 3.9E-112 T 12-10-2018 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA BAMF_0769 f6289548fa52b7c352c490cbc42126ae 263 Gene3D G3DSA:3.20.20.370 24 263 2.3E-94 T 12-10-2018 BAMF_0769 f6289548fa52b7c352c490cbc42126ae 263 SUPERFAMILY SSF88713 33 253 7.41E-64 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BAMF_0769 f6289548fa52b7c352c490cbc42126ae 263 Pfam PF01522 Polysaccharide deacetylase 61 184 1.7E-34 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BAMF_0714 b311b2d2718a60f070d7e32ced4ecfe8 185 Pfam PF16884 N-terminal domain of oxidoreductase 7 111 3.0E-36 T 12-10-2018 BAMF_0714 b311b2d2718a60f070d7e32ced4ecfe8 185 Gene3D G3DSA:3.90.180.10 1 160 2.0E-46 T 12-10-2018 BAMF_0714 b311b2d2718a60f070d7e32ced4ecfe8 185 SUPERFAMILY SSF50129 5 142 1.91E-37 T 12-10-2018 IPR011032 GroES-like superfamily BAMF_0513 609eedd8342c9078cec797a20fcb4edb 452 Pfam PF00144 Beta-lactamase 9 338 4.7E-57 T 12-10-2018 IPR001466 Beta-lactamase-related BAMF_0513 609eedd8342c9078cec797a20fcb4edb 452 SUPERFAMILY SSF56601 9 332 4.23E-78 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_0513 609eedd8342c9078cec797a20fcb4edb 452 Gene3D G3DSA:3.40.710.10 19 348 4.0E-85 T 12-10-2018 BAMF_2260 34ba4e922b5b31b6bae4c0c8caf5bcc4 306 Gene3D G3DSA:3.20.20.100 1 296 1.3E-107 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_2260 34ba4e922b5b31b6bae4c0c8caf5bcc4 306 SUPERFAMILY SSF51430 1 297 2.1E-80 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_2260 34ba4e922b5b31b6bae4c0c8caf5bcc4 306 Pfam PF00248 Aldo/keto reductase family 15 294 6.0E-65 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain BAMF_2260 34ba4e922b5b31b6bae4c0c8caf5bcc4 306 PRINTS PR00069 Aldo-keto reductase signature 103 121 1.9E-6 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2260 34ba4e922b5b31b6bae4c0c8caf5bcc4 306 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.9E-6 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2260 34ba4e922b5b31b6bae4c0c8caf5bcc4 306 PRINTS PR00069 Aldo-keto reductase signature 134 151 1.9E-6 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2648 2e43c492b0fb36e2ebca601aee0fb699 145 SUPERFAMILY SSF54637 14 143 7.64E-33 T 12-10-2018 IPR029069 HotDog domain superfamily BAMF_2648 2e43c492b0fb36e2ebca601aee0fb699 145 Pfam PF03061 Thioesterase superfamily 34 114 1.3E-11 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BAMF_2648 2e43c492b0fb36e2ebca601aee0fb699 145 Gene3D G3DSA:3.10.129.10 10 144 4.9E-31 T 12-10-2018 BAMF_0324 bdfede7a287cfb72dc8c624983fb4566 473 Gene3D G3DSA:3.40.1670.10 326 440 1.1E-28 T 12-10-2018 BAMF_0324 bdfede7a287cfb72dc8c624983fb4566 473 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 441 6.1E-162 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 BAMF_0324 bdfede7a287cfb72dc8c624983fb4566 473 SUPERFAMILY SSF143968 311 462 5.75E-41 T 12-10-2018 BAMF_0324 bdfede7a287cfb72dc8c624983fb4566 473 SUPERFAMILY SSF50475 3 308 8.24E-87 T 12-10-2018 BAMF_0324 bdfede7a287cfb72dc8c624983fb4566 473 Hamap MF_01985 Phenolic acid decarboxylase subunit C. 1 472 73.735 T 12-10-2018 IPR032902 Phenolic acid decarboxylase subunit C GO:0016831 BAMF_0324 bdfede7a287cfb72dc8c624983fb4566 473 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 415 4.1E-116 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 BAMF_3846 fb5c0c722a0a9ec9bc831dec3cd1211e 211 PIRSF PIRSF038959 1 211 2.5E-51 T 12-10-2018 IPR026272 Immunity protein SdpI BAMF_3846 fb5c0c722a0a9ec9bc831dec3cd1211e 211 Pfam PF07853 Protein of unknown function (DUF1648) 10 57 9.4E-12 T 12-10-2018 IPR012867 Domain of unknown function DUF1648 BAMF_3846 fb5c0c722a0a9ec9bc831dec3cd1211e 211 Pfam PF13630 SdpI/YhfL protein family 133 197 1.4E-19 T 12-10-2018 IPR025962 SdpI/YhfL protein family BAMF_2052 986fe13aff8213f0d7c1522cd7bb916e 229 Gene3D G3DSA:3.40.1080.10 4 222 5.9E-75 T 12-10-2018 BAMF_2052 986fe13aff8213f0d7c1522cd7bb916e 229 SUPERFAMILY SSF100950 6 221 1.81E-72 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BAMF_2052 986fe13aff8213f0d7c1522cd7bb916e 229 SMART SM00882 7 219 2.4E-75 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BAMF_2052 986fe13aff8213f0d7c1522cd7bb916e 229 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 9 220 7.0E-68 T 12-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 BAMF_2052 986fe13aff8213f0d7c1522cd7bb916e 229 Pfam PF01144 Coenzyme A transferase 10 218 1.3E-67 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BAMF_3083 f0331a10f4d841b757b2d3882f53f518 108 Gene3D G3DSA:2.40.10.270 1 108 8.9E-12 T 12-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily BAMF_3083 f0331a10f4d841b757b2d3882f53f518 108 Pfam PF05521 Phage head-tail joining protein 7 102 2.3E-15 T 12-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor BAMF_3083 f0331a10f4d841b757b2d3882f53f518 108 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 6 105 3.4E-11 T 12-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor BAMF_0334 8020d15d39a6845ceb934156321980fc 163 SUPERFAMILY SSF55729 6 159 6.03E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_0334 8020d15d39a6845ceb934156321980fc 163 Gene3D G3DSA:3.40.630.30 1 161 6.6E-24 T 12-10-2018 BAMF_0334 8020d15d39a6845ceb934156321980fc 163 Pfam PF00583 Acetyltransferase (GNAT) family 46 140 6.2E-10 T 12-10-2018 IPR000182 GNAT domain BAMF_1772 cf3da143e71106ad943266538cb3debd 391 SUPERFAMILY SSF53383 3 388 7.61E-113 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_1772 cf3da143e71106ad943266538cb3debd 391 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 7 391 8.1E-200 T 12-10-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type BAMF_1772 cf3da143e71106ad943266538cb3debd 391 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 236 245 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 BAMF_1772 cf3da143e71106ad943266538cb3debd 391 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 381 8.0E-134 T 12-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 BAMF_1772 cf3da143e71106ad943266538cb3debd 391 Gene3D G3DSA:3.40.640.10 55 289 1.6E-147 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_1772 cf3da143e71106ad943266538cb3debd 391 Pfam PF00155 Aminotransferase class I and II 40 381 1.3E-68 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_1772 cf3da143e71106ad943266538cb3debd 391 Gene3D G3DSA:3.90.1150.10 35 381 1.6E-147 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_2445 0828ea3980a386700c3ebf78357ecf12 188 Gene3D G3DSA:3.90.20.20 1 131 2.8E-24 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 BAMF_2445 0828ea3980a386700c3ebf78357ecf12 188 PRINTS PR00773 GrpE protein signature 86 101 1.3E-30 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BAMF_2445 0828ea3980a386700c3ebf78357ecf12 188 PRINTS PR00773 GrpE protein signature 140 155 1.3E-30 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BAMF_2445 0828ea3980a386700c3ebf78357ecf12 188 PRINTS PR00773 GrpE protein signature 58 74 1.3E-30 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BAMF_2445 0828ea3980a386700c3ebf78357ecf12 188 PRINTS PR00773 GrpE protein signature 167 186 1.3E-30 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BAMF_2445 0828ea3980a386700c3ebf78357ecf12 188 ProSitePatterns PS01071 grpE protein signature. 143 186 - T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BAMF_2445 0828ea3980a386700c3ebf78357ecf12 188 SUPERFAMILY SSF58014 37 132 4.84E-26 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 BAMF_2445 0828ea3980a386700c3ebf78357ecf12 188 Gene3D G3DSA:2.30.22.10 132 188 2.0E-25 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 BAMF_2445 0828ea3980a386700c3ebf78357ecf12 188 SUPERFAMILY SSF51064 133 188 3.66E-19 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 BAMF_2445 0828ea3980a386700c3ebf78357ecf12 188 Hamap MF_01151 Protein GrpE [grpE]. 2 188 21.98 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BAMF_2445 0828ea3980a386700c3ebf78357ecf12 188 Pfam PF01025 GrpE 25 188 1.1E-52 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BAMF_0444 f8391961d2f4e31cfa436cfdc12dbd5a 273 Pfam PF08678 Rsbr N terminal 10 135 7.3E-30 T 12-10-2018 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain BAMF_0444 f8391961d2f4e31cfa436cfdc12dbd5a 273 Gene3D G3DSA:1.10.490.10 1 135 1.7E-41 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 BAMF_0444 f8391961d2f4e31cfa436cfdc12dbd5a 273 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 9 134 3.0E-34 T 12-10-2018 BAMF_0444 f8391961d2f4e31cfa436cfdc12dbd5a 273 Pfam PF01740 STAS domain 155 255 2.3E-14 T 12-10-2018 IPR002645 STAS domain BAMF_0444 f8391961d2f4e31cfa436cfdc12dbd5a 273 SUPERFAMILY SSF52091 149 243 3.34E-16 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_0444 f8391961d2f4e31cfa436cfdc12dbd5a 273 Gene3D G3DSA:3.30.750.24 147 267 3.5E-39 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_0174 e25d20768e80d1d426e3ecc010fd3dff 183 Gene3D G3DSA:3.40.630.30 1 123 6.4E-6 T 12-10-2018 BAMF_0174 e25d20768e80d1d426e3ecc010fd3dff 183 SUPERFAMILY SSF55729 1 122 1.9E-8 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_0095 dd1f4925c34e4ddec2a28190d706ea8c 143 Pfam PF00636 Ribonuclease III domain 17 116 1.2E-17 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BAMF_0095 dd1f4925c34e4ddec2a28190d706ea8c 143 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 7 133 30.529 T 12-10-2018 IPR008226 Mini-ribonuclease 3 family BAMF_0095 dd1f4925c34e4ddec2a28190d706ea8c 143 PIRSF PIRSF005520 1 139 6.2E-54 T 12-10-2018 IPR008226 Mini-ribonuclease 3 family BAMF_0095 dd1f4925c34e4ddec2a28190d706ea8c 143 Gene3D G3DSA:1.10.1520.10 4 143 1.7E-53 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BAMF_0095 dd1f4925c34e4ddec2a28190d706ea8c 143 SUPERFAMILY SSF69065 9 129 8.89E-42 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BAMF_0095 dd1f4925c34e4ddec2a28190d706ea8c 143 SMART SM00535 1 134 1.0E-16 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BAMF_0849 ab7a2e06e07bc8cd0392030638f2de84 401 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 5 384 2.8E-70 T 12-10-2018 IPR024455 Phage capsid BAMF_0849 ab7a2e06e07bc8cd0392030638f2de84 401 SUPERFAMILY SSF56563 111 386 2.22E-36 T 12-10-2018 BAMF_0849 ab7a2e06e07bc8cd0392030638f2de84 401 Pfam PF05065 Phage capsid family 115 384 1.7E-31 T 12-10-2018 IPR024455 Phage capsid BAMF_1631 7f87488a532a4334d83b01acf08aa84e 197 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 24 196 39.773 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BAMF_1631 7f87488a532a4334d83b01acf08aa84e 197 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 8 191 1.0E-94 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BAMF_1631 7f87488a532a4334d83b01acf08aa84e 197 Pfam PF01583 Adenylylsulphate kinase 26 178 1.8E-74 T 12-10-2018 BAMF_1631 7f87488a532a4334d83b01acf08aa84e 197 SUPERFAMILY SSF52540 22 194 9.25E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1631 7f87488a532a4334d83b01acf08aa84e 197 Gene3D G3DSA:3.40.50.300 3 196 5.9E-79 T 12-10-2018 BAMF_1497 0311946bd3ac655066a76ad2bb87054e 268 Pfam PF00924 Mechanosensitive ion channel 70 261 2.4E-47 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BAMF_1497 0311946bd3ac655066a76ad2bb87054e 268 Gene3D G3DSA:2.30.30.60 126 175 7.7E-22 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BAMF_1497 0311946bd3ac655066a76ad2bb87054e 268 Gene3D G3DSA:3.30.70.100 176 261 4.8E-22 T 12-10-2018 BAMF_1497 0311946bd3ac655066a76ad2bb87054e 268 SUPERFAMILY SSF82689 174 260 2.62E-8 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BAMF_1497 0311946bd3ac655066a76ad2bb87054e 268 SUPERFAMILY SSF50182 111 170 4.25E-15 T 12-10-2018 IPR010920 LSM domain superfamily BAMF_1497 0311946bd3ac655066a76ad2bb87054e 268 SUPERFAMILY SSF82861 21 109 1.57E-14 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BAMF_2480 ce624ad07961eb55576dafcb673ce182 440 SUPERFAMILY SSF56801 63 414 3.92E-24 T 12-10-2018 BAMF_2480 ce624ad07961eb55576dafcb673ce182 440 Gene3D G3DSA:3.30.300.30 336 438 1.2E-5 T 12-10-2018 BAMF_2480 ce624ad07961eb55576dafcb673ce182 440 Gene3D G3DSA:3.40.50.12780 23 335 5.9E-55 T 12-10-2018 BAMF_2382 a5d08caaaddf8e75d2e3b485bb45a193 57 ProDom PD052097 RELATED ALKALIPHILY YQGW MEMBRANE TRANSMEMBRANE SPANNING 24 57 9.0E-10 T 12-10-2018 IPR024490 Protein of unknown function DUF2759 BAMF_2382 a5d08caaaddf8e75d2e3b485bb45a193 57 Pfam PF10958 Protein of unknown function (DUF2759) 6 56 1.3E-23 T 12-10-2018 IPR024490 Protein of unknown function DUF2759 BAMF_0734 d5d0c20db7064853d75830e8cff963be 44 ProDom PD049467 YFLJ 1 43 1.0E-14 T 12-10-2018 IPR022580 Protein of unknown function DUF2639 BAMF_0734 d5d0c20db7064853d75830e8cff963be 44 Pfam PF11121 Protein of unknown function (DUF2639) 2 39 5.6E-20 T 12-10-2018 IPR022580 Protein of unknown function DUF2639 BAMF_1740 86244228c0cfb291becb7990ddb1af6a 89 SMART SM01387 8 88 7.5E-52 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_1740 86244228c0cfb291becb7990ddb1af6a 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 1.2E-42 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1740 86244228c0cfb291becb7990ddb1af6a 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 12 88 7.0E-38 T 12-10-2018 BAMF_1740 86244228c0cfb291becb7990ddb1af6a 89 SUPERFAMILY SSF47060 3 89 7.36E-37 T 12-10-2018 IPR009068 S15/NS1, RNA-binding BAMF_1740 86244228c0cfb291becb7990ddb1af6a 89 Pfam PF00312 Ribosomal protein S15 8 88 1.8E-38 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_1740 86244228c0cfb291becb7990ddb1af6a 89 Gene3D G3DSA:1.10.287.10 2 89 8.5E-38 T 12-10-2018 BAMF_1740 86244228c0cfb291becb7990ddb1af6a 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 23.218 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1740 86244228c0cfb291becb7990ddb1af6a 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 16 152 1.1E-51 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 312 1.6E-59 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 PRINTS PR00102 Ornithine carbamoyltransferase signature 55 69 1.4E-29 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 PRINTS PR00102 Ornithine carbamoyltransferase signature 293 304 1.4E-29 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 PRINTS PR00102 Ornithine carbamoyltransferase signature 128 142 1.4E-29 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 PRINTS PR00102 Ornithine carbamoyltransferase signature 231 241 1.4E-29 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 PRINTS PR00102 Ornithine carbamoyltransferase signature 88 101 1.4E-29 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 57 64 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 SUPERFAMILY SSF53671 11 314 8.64E-112 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 279 302 3.1E-28 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 57 76 3.1E-28 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 139 150 3.1E-28 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 3.1E-28 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 Gene3D G3DSA:3.40.50.1370 17 310 2.3E-122 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 15 315 80.644 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 16 314 2.8E-128 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BAMF_1198 0819e23983b5ef7313a0e6a9cd781a31 318 Gene3D G3DSA:3.40.50.1370 142 301 2.3E-122 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BAMF_2611 cf8688954eda98f42c06d3fcb436f133 189 PIRSF PIRSF006305 1 189 1.9E-64 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 BAMF_2611 cf8688954eda98f42c06d3fcb436f133 189 Gene3D G3DSA:3.90.950.10 1 189 3.8E-78 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BAMF_2611 cf8688954eda98f42c06d3fcb436f133 189 Pfam PF02545 Maf-like protein 4 184 1.6E-59 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 BAMF_2611 cf8688954eda98f42c06d3fcb436f133 189 Hamap MF_00528 Septum formation protein Maf [maf]. 4 189 32.359 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 BAMF_2611 cf8688954eda98f42c06d3fcb436f133 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 183 1.1E-70 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 BAMF_2611 cf8688954eda98f42c06d3fcb436f133 189 SUPERFAMILY SSF52972 2 184 3.01E-63 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 SUPERFAMILY SSF52374 6 575 5.86E-147 T 12-10-2018 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 TIGRFAM TIGR00422 valS: valine--tRNA ligase 8 861 0.0 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 879 16.273 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 Gene3D G3DSA:1.10.287.380 807 879 1.8E-24 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 SUPERFAMILY SSF46589 814 878 1.88E-17 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 Gene3D G3DSA:3.90.740.10 181 347 0.0 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 Gene3D G3DSA:1.10.730.10 8 741 0.0 T 12-10-2018 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 SUPERFAMILY SSF47323 577 829 3.18E-77 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 814 879 1.3E-23 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 21 565 1.0E-229 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 Pfam PF08264 Anticodon-binding domain of tRNA 608 756 1.3E-43 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 Gene3D G3DSA:3.40.50.620 28 526 0.0 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 SUPERFAMILY SSF50677 197 347 2.62E-65 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 PRINTS PR00986 Valyl-tRNA synthetase signature 445 466 6.6E-39 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 PRINTS PR00986 Valyl-tRNA synthetase signature 351 364 6.6E-39 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 6.6E-39 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 6.6E-39 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BAMF_2615 f709709ec92d8cdf9ba2c007d1acbe9c 880 PRINTS PR00986 Valyl-tRNA synthetase signature 477 495 6.6E-39 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BAMF_2802 1a1c593a1cada22ea9854775ca41fcb6 240 SUPERFAMILY SSF55120 48 236 2.72E-41 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_2802 1a1c593a1cada22ea9854775ca41fcb6 240 Pfam PF00849 RNA pseudouridylate synthase 63 196 1.2E-18 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_2802 1a1c593a1cada22ea9854775ca41fcb6 240 Pfam PF01479 S4 domain 2 45 2.0E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_2802 1a1c593a1cada22ea9854775ca41fcb6 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 67 229 9.7E-46 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BAMF_2802 1a1c593a1cada22ea9854775ca41fcb6 240 Gene3D G3DSA:3.30.70.580 64 232 9.3E-55 T 12-10-2018 BAMF_2802 1a1c593a1cada22ea9854775ca41fcb6 240 Gene3D G3DSA:3.10.290.10 1 63 1.3E-15 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BAMF_2802 1a1c593a1cada22ea9854775ca41fcb6 240 SUPERFAMILY SSF55174 2 60 5.69E-12 T 12-10-2018 BAMF_2802 1a1c593a1cada22ea9854775ca41fcb6 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 101 115 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BAMF_2802 1a1c593a1cada22ea9854775ca41fcb6 240 Gene3D G3DSA:3.30.70.1560 130 214 9.3E-55 T 12-10-2018 BAMF_2802 1a1c593a1cada22ea9854775ca41fcb6 240 SMART SM00363 2 60 1.1E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_2305 9262cb53cbf702185a2a110d93ab9f99 364 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 148 200 1.4E-6 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2305 9262cb53cbf702185a2a110d93ab9f99 364 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 218 298 2.9E-9 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2305 9262cb53cbf702185a2a110d93ab9f99 364 Gene3D G3DSA:3.40.50.10860 10 343 3.1E-153 T 12-10-2018 BAMF_2305 9262cb53cbf702185a2a110d93ab9f99 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 286 297 1.7E-22 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2305 9262cb53cbf702185a2a110d93ab9f99 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 132 154 1.7E-22 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2305 9262cb53cbf702185a2a110d93ab9f99 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 176 196 1.7E-22 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2305 9262cb53cbf702185a2a110d93ab9f99 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 1.7E-22 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2305 9262cb53cbf702185a2a110d93ab9f99 364 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2305 9262cb53cbf702185a2a110d93ab9f99 364 Gene3D G3DSA:3.40.50.720 134 336 3.1E-153 T 12-10-2018 BAMF_2305 9262cb53cbf702185a2a110d93ab9f99 364 SMART SM00839 144 351 5.5E-73 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2305 9262cb53cbf702185a2a110d93ab9f99 364 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 22 131 7.6E-28 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BAMF_2305 9262cb53cbf702185a2a110d93ab9f99 364 SUPERFAMILY SSF53223 4 143 1.15E-49 T 12-10-2018 BAMF_2305 9262cb53cbf702185a2a110d93ab9f99 364 SUPERFAMILY SSF51735 141 348 3.29E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2305 9262cb53cbf702185a2a110d93ab9f99 364 PIRSF PIRSF000188 1 353 1.7E-167 T 12-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 BAMF_0054 98aef32b7caf9d725bad1243ed166c80 76 ProDom PD057826 YABK 4 76 3.0E-32 T 12-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 BAMF_0054 98aef32b7caf9d725bad1243ed166c80 76 Pfam PF10955 Protein of unknown function (DUF2757) 1 76 1.1E-34 T 12-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 BAMF_3700 ae1aeef187a2eef91e71dabbc9ce5bdc 105 SUPERFAMILY SSF46973 2 101 3.92E-34 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 BAMF_3700 ae1aeef187a2eef91e71dabbc9ce5bdc 105 PIRSF PIRSF000699 1 105 2.7E-35 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BAMF_3700 ae1aeef187a2eef91e71dabbc9ce5bdc 105 Gene3D G3DSA:1.20.58.280 1 104 5.3E-36 T 12-10-2018 BAMF_3700 ae1aeef187a2eef91e71dabbc9ce5bdc 105 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 8 101 1.7E-33 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 SUPERFAMILY SSF81665 1 879 2.75E-135 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 Pfam PF00690 Cation transporter/ATPase, N-terminus 4 71 7.9E-20 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 Gene3D G3DSA:3.40.50.1000 321 676 0.0 T 12-10-2018 IPR023214 HAD superfamily BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 Pfam PF00122 E1-E2 ATPase 111 304 1.5E-53 T 12-10-2018 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 326 332 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 Pfam PF00702 haloacid dehalogenase-like hydrolase 322 645 4.9E-25 T 12-10-2018 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 SUPERFAMILY SSF56784 322 735 1.41E-66 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 SUPERFAMILY SSF81660 331 533 2.09E-59 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 161 175 8.6E-42 T 12-10-2018 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 655 667 8.6E-42 T 12-10-2018 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 324 338 8.6E-42 T 12-10-2018 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 551 561 8.6E-42 T 12-10-2018 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 650 8.6E-42 T 12-10-2018 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 540 8.6E-42 T 12-10-2018 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 Gene3D G3DSA:2.70.150.10 16 227 0.0 T 12-10-2018 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 SUPERFAMILY SSF81653 114 224 1.06E-31 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 Gene3D G3DSA:1.20.1110.10 54 875 0.0 T 12-10-2018 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 Gene3D G3DSA:3.40.1110.10 334 536 0.0 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 83 177 1.5E-18 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 600 721 8.2E-37 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 429 575 1.1E-19 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 210 346 6.6E-29 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 Pfam PF00689 Cation transporting ATPase, C-terminus 715 880 3.6E-53 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 TIGRFAM TIGR01116 ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 54 881 6.5E-217 T 12-10-2018 IPR005782 P-type ATPase, subfamily IIA, SERCA-type GO:0005388|GO:0006816|GO:0016021 Reactome: R-HSA-1912420|Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 SMART SM00831 2 76 6.6E-26 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 631 647 1.2E-18 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 663 688 1.2E-18 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 488 506 1.2E-18 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BAMF_1637 e5513676a1992acd8dd2845282fc480e 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 603 619 1.2E-18 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BAMF_1946 4dc6beb1f42c3def4401159628e8c756 590 SUPERFAMILY SSF56235 42 583 6.37E-174 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BAMF_1946 4dc6beb1f42c3def4401159628e8c756 590 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 405 429 - T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 BAMF_1946 4dc6beb1f42c3def4401159628e8c756 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 291 310 9.2E-78 T 12-10-2018 BAMF_1946 4dc6beb1f42c3def4401159628e8c756 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 71 96 9.2E-78 T 12-10-2018 BAMF_1946 4dc6beb1f42c3def4401159628e8c756 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 423 9.2E-78 T 12-10-2018 BAMF_1946 4dc6beb1f42c3def4401159628e8c756 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 164 183 9.2E-78 T 12-10-2018 BAMF_1946 4dc6beb1f42c3def4401159628e8c756 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 146 164 9.2E-78 T 12-10-2018 BAMF_1946 4dc6beb1f42c3def4401159628e8c756 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 447 9.2E-78 T 12-10-2018 BAMF_1946 4dc6beb1f42c3def4401159628e8c756 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 484 501 9.2E-78 T 12-10-2018 BAMF_1946 4dc6beb1f42c3def4401159628e8c756 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 261 277 9.2E-78 T 12-10-2018 BAMF_1946 4dc6beb1f42c3def4401159628e8c756 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 460 475 9.2E-78 T 12-10-2018 BAMF_1946 4dc6beb1f42c3def4401159628e8c756 590 Pfam PF01019 Gamma-glutamyltranspeptidase 64 578 9.0E-173 T 12-10-2018 BAMF_1946 4dc6beb1f42c3def4401159628e8c756 590 Gene3D G3DSA:3.60.20.40 405 582 3.0E-71 T 12-10-2018 BAMF_1946 4dc6beb1f42c3def4401159628e8c756 590 Gene3D G3DSA:1.10.246.130 277 404 7.3E-51 T 12-10-2018 BAMF_1946 4dc6beb1f42c3def4401159628e8c756 590 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 49 576 8.3E-213 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 BAMF_2807 a60579a35cdee94f420fc3953f0c3111 274 Gene3D G3DSA:3.40.50.2300 48 259 7.6E-50 T 12-10-2018 BAMF_2807 a60579a35cdee94f420fc3953f0c3111 274 Pfam PF13377 Periplasmic binding protein-like domain 102 268 4.5E-34 T 12-10-2018 BAMF_2807 a60579a35cdee94f420fc3953f0c3111 274 SUPERFAMILY SSF53822 46 262 2.55E-44 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BAMF_2807 a60579a35cdee94f420fc3953f0c3111 274 Gene3D G3DSA:3.40.50.2300 93 263 7.6E-50 T 12-10-2018 BAMF_3506 0ef6489f49ae50e097076b32a7f6f7ce 105 Pfam PF00547 Urease, gamma subunit 1 99 7.7E-45 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3506 0ef6489f49ae50e097076b32a7f6f7ce 105 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 102 4.6E-56 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3506 0ef6489f49ae50e097076b32a7f6f7ce 105 PIRSF PIRSF001223 1 100 1.2E-49 T 12-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3506 0ef6489f49ae50e097076b32a7f6f7ce 105 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.56 T 12-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3506 0ef6489f49ae50e097076b32a7f6f7ce 105 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 6.0E-44 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3506 0ef6489f49ae50e097076b32a7f6f7ce 105 SUPERFAMILY SSF54111 1 99 4.45E-44 T 12-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3506 0ef6489f49ae50e097076b32a7f6f7ce 105 Gene3D G3DSA:3.30.280.10 1 100 1.6E-46 T 12-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_2223 8f73e8b558b628d06fbe01a85f2334ad 124 Gene3D G3DSA:3.40.630.30 5 121 5.1E-15 T 12-10-2018 BAMF_2223 8f73e8b558b628d06fbe01a85f2334ad 124 SUPERFAMILY SSF55729 5 96 1.86E-14 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_2223 8f73e8b558b628d06fbe01a85f2334ad 124 Pfam PF00583 Acetyltransferase (GNAT) family 30 112 3.1E-12 T 12-10-2018 IPR000182 GNAT domain BAMF_2859 17224f85467db3e2fb9c07e2dc2c6d67 487 SUPERFAMILY SSF56801 6 483 1.83E-143 T 12-10-2018 BAMF_2859 17224f85467db3e2fb9c07e2dc2c6d67 487 Pfam PF00501 AMP-binding enzyme 11 390 7.7E-95 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_2859 17224f85467db3e2fb9c07e2dc2c6d67 487 ProSitePatterns PS00455 Putative AMP-binding domain signature. 150 161 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_2859 17224f85467db3e2fb9c07e2dc2c6d67 487 Gene3D G3DSA:3.30.300.310 388 485 4.3E-32 T 12-10-2018 BAMF_2859 17224f85467db3e2fb9c07e2dc2c6d67 487 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 5 481 50.398 T 12-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 BAMF_2859 17224f85467db3e2fb9c07e2dc2c6d67 487 Gene3D G3DSA:3.40.50.12780 1 387 3.0E-147 T 12-10-2018 BAMF_2859 17224f85467db3e2fb9c07e2dc2c6d67 487 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 30 477 7.1E-172 T 12-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 BAMF_2859 17224f85467db3e2fb9c07e2dc2c6d67 487 Pfam PF13193 AMP-binding enzyme C-terminal domain 399 472 1.1E-19 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_3606 df5664caad774aa0f0d7f47041f27ce9 237 Gene3D G3DSA:2.60.120.10 12 226 1.6E-102 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_3606 df5664caad774aa0f0d7f47041f27ce9 237 SUPERFAMILY SSF51182 4 225 1.49E-29 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BAMF_3606 df5664caad774aa0f0d7f47041f27ce9 237 Pfam PF07883 Cupin domain 152 216 1.6E-8 T 12-10-2018 IPR013096 Cupin 2, conserved barrel BAMF_3606 df5664caad774aa0f0d7f47041f27ce9 237 Pfam PF07883 Cupin domain 41 107 1.1E-10 T 12-10-2018 IPR013096 Cupin 2, conserved barrel BAMF_3606 df5664caad774aa0f0d7f47041f27ce9 237 Gene3D G3DSA:2.60.120.10 16 125 1.6E-102 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_0125 c6f3bf8f1d87adf40ef2ba996ea7e075 87 Gene3D G3DSA:2.40.50.140 6 86 6.6E-34 T 12-10-2018 BAMF_0125 c6f3bf8f1d87adf40ef2ba996ea7e075 87 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 5.7E-11 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0125 c6f3bf8f1d87adf40ef2ba996ea7e075 87 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 5.7E-11 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0125 c6f3bf8f1d87adf40ef2ba996ea7e075 87 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 5.7E-11 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0125 c6f3bf8f1d87adf40ef2ba996ea7e075 87 Pfam PF00366 Ribosomal protein S17 12 79 3.6E-31 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0125 c6f3bf8f1d87adf40ef2ba996ea7e075 87 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 78 8.0E-33 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0125 c6f3bf8f1d87adf40ef2ba996ea7e075 87 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 78 2.8E-34 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0125 c6f3bf8f1d87adf40ef2ba996ea7e075 87 SUPERFAMILY SSF50249 7 84 7.71E-31 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_0125 c6f3bf8f1d87adf40ef2ba996ea7e075 87 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 82 23.476 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0125 c6f3bf8f1d87adf40ef2ba996ea7e075 87 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 12-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_1942 a3452e8563fdcd3f521f2f88e093e34a 462 Pfam PF01554 MatE 27 186 3.6E-40 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BAMF_1942 a3452e8563fdcd3f521f2f88e093e34a 462 Pfam PF01554 MatE 256 417 7.6E-33 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BAMF_1942 a3452e8563fdcd3f521f2f88e093e34a 462 PIRSF PIRSF006603 2 462 5.0E-138 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BAMF_1942 a3452e8563fdcd3f521f2f88e093e34a 462 TIGRFAM TIGR00797 matE: MATE efflux family protein 27 430 8.9E-105 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BAMF_3675 4590d290c175f654e93c73b280a41ce5 127 Gene3D G3DSA:3.10.180.10 1 127 4.2E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_3675 4590d290c175f654e93c73b280a41ce5 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 4.2E-17 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BAMF_3675 4590d290c175f654e93c73b280a41ce5 127 SUPERFAMILY SSF54593 4 127 3.62E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_3675 4590d290c175f654e93c73b280a41ce5 127 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BAMF_2641 df4db8ed1856000421ca73ce5a3f5ded 169 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 145 3.0E-30 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 BAMF_2641 df4db8ed1856000421ca73ce5a3f5ded 169 Gene3D G3DSA:3.60.21.10 1 168 3.3E-43 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BAMF_2641 df4db8ed1856000421ca73ce5a3f5ded 169 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 146 3.5E-37 T 12-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 BAMF_2641 df4db8ed1856000421ca73ce5a3f5ded 169 SUPERFAMILY SSF56300 1 158 1.39E-41 T 12-10-2018 BAMF_2477 f7684c27c97775ceac471e167921ad02 482 Gene3D G3DSA:1.20.1720.10 20 227 1.2E-40 T 12-10-2018 BAMF_2477 f7684c27c97775ceac471e167921ad02 482 Pfam PF07690 Major Facilitator Superfamily 24 411 4.0E-45 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_2477 f7684c27c97775ceac471e167921ad02 482 SUPERFAMILY SSF103473 13 462 7.98E-55 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_2477 f7684c27c97775ceac471e167921ad02 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 169 193 5.6E-7 T 12-10-2018 BAMF_2477 f7684c27c97775ceac471e167921ad02 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 82 104 5.6E-7 T 12-10-2018 BAMF_2477 f7684c27c97775ceac471e167921ad02 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 22 46 5.6E-7 T 12-10-2018 BAMF_2477 f7684c27c97775ceac471e167921ad02 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 342 362 5.6E-7 T 12-10-2018 BAMF_2477 f7684c27c97775ceac471e167921ad02 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 5.6E-7 T 12-10-2018 BAMF_2477 f7684c27c97775ceac471e167921ad02 482 Gene3D G3DSA:1.20.1250.20 272 472 1.5E-12 T 12-10-2018 BAMF_0908 39db7f10ba2ae379da8ebad12d366ff4 187 SUPERFAMILY SSF53098 8 178 1.9E-9 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BAMF_0908 39db7f10ba2ae379da8ebad12d366ff4 187 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 129 148 1.7E-5 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BAMF_0908 39db7f10ba2ae379da8ebad12d366ff4 187 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 10 23 1.7E-5 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BAMF_0908 39db7f10ba2ae379da8ebad12d366ff4 187 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 161 173 1.7E-5 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BAMF_0908 39db7f10ba2ae379da8ebad12d366ff4 187 Gene3D G3DSA:3.30.420.10 9 177 2.5E-27 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BAMF_0154 ca551ba43c56175adb7077a7f66aa048 350 SUPERFAMILY SSF52540 107 347 4.28E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0154 ca551ba43c56175adb7077a7f66aa048 350 ProSitePatterns PS01215 Mrp family signature. 210 226 - T 12-10-2018 IPR000808 Mrp, conserved site GO:0005524 BAMF_0154 ca551ba43c56175adb7077a7f66aa048 350 Gene3D G3DSA:3.40.50.300 102 321 6.5E-67 T 12-10-2018 BAMF_0154 ca551ba43c56175adb7077a7f66aa048 350 Hamap MF_02040 Iron-sulfur cluster carrier protein. 97 345 33.306 T 12-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein BAMF_0154 ca551ba43c56175adb7077a7f66aa048 350 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 109 344 9.0E-84 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BAMF_3031 dcd802eb8badef89db1bdca060bb13eb 337 Gene3D G3DSA:3.90.1200.10 98 310 1.8E-22 T 12-10-2018 BAMF_3031 dcd802eb8badef89db1bdca060bb13eb 337 SUPERFAMILY SSF56112 3 315 1.43E-19 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BAMF_3031 dcd802eb8badef89db1bdca060bb13eb 337 TIGRFAM TIGR02905 spore_yutH: spore coat protein YutH 3 310 5.6E-116 T 12-10-2018 IPR014254 Spore coat protein YutH BAMF_1660 f78bc4b96444975cfcef413c26784998 188 PIRSF PIRSF037733 1 188 1.2E-84 T 12-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 BAMF_1660 f78bc4b96444975cfcef413c26784998 188 Hamap MF_01814 Transcription factor FapR [fapR]. 1 188 38.734 T 12-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 BAMF_1660 f78bc4b96444975cfcef413c26784998 188 SUPERFAMILY SSF54637 74 182 1.94E-26 T 12-10-2018 IPR029069 HotDog domain superfamily BAMF_1660 f78bc4b96444975cfcef413c26784998 188 Gene3D G3DSA:3.10.129.10 68 188 4.0E-41 T 12-10-2018 BAMF_1660 f78bc4b96444975cfcef413c26784998 188 Pfam PF03061 Thioesterase superfamily 108 166 6.5E-5 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BAMF_1660 f78bc4b96444975cfcef413c26784998 188 Gene3D G3DSA:1.10.10.10 1 60 3.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3798 a2b163617d6a99f7001d0ae3c65d0690 445 SUPERFAMILY SSF53720 7 442 1.83E-120 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BAMF_3798 a2b163617d6a99f7001d0ae3c65d0690 445 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 241 252 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BAMF_3798 a2b163617d6a99f7001d0ae3c65d0690 445 Pfam PF00171 Aldehyde dehydrogenase family 6 437 2.3E-97 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BAMF_3798 a2b163617d6a99f7001d0ae3c65d0690 445 PIRSF PIRSF036492 1 445 6.2E-165 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 BAMF_3798 a2b163617d6a99f7001d0ae3c65d0690 445 Gene3D G3DSA:3.40.605.10 20 439 1.7E-155 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BAMF_3798 a2b163617d6a99f7001d0ae3c65d0690 445 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 213 220 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BAMF_3798 a2b163617d6a99f7001d0ae3c65d0690 445 Gene3D G3DSA:3.40.309.10 217 419 1.7E-155 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BAMF_2561 0bdd118df250f3ce495be2e2c1be9452 379 PIRSF PIRSF005572 1 379 2.6E-125 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BAMF_2561 0bdd118df250f3ce495be2e2c1be9452 379 Gene3D G3DSA:3.40.640.10 61 235 7.3E-142 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_2561 0bdd118df250f3ce495be2e2c1be9452 379 SUPERFAMILY SSF53383 3 377 1.48E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_2561 0bdd118df250f3ce495be2e2c1be9452 379 Pfam PF00266 Aminotransferase class-V 4 365 1.4E-81 T 12-10-2018 IPR000192 Aminotransferase class V domain BAMF_2561 0bdd118df250f3ce495be2e2c1be9452 379 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BAMF_2561 0bdd118df250f3ce495be2e2c1be9452 379 Gene3D G3DSA:3.90.1150.10 4 371 7.3E-142 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_2561 0bdd118df250f3ce495be2e2c1be9452 379 Gene3D G3DSA:1.10.260.50 15 278 7.3E-142 T 12-10-2018 BAMF_3717 c4bb4dbf44728ce667e450480330540b 297 Gene3D G3DSA:1.10.10.2840 172 294 2.0E-13 T 12-10-2018 BAMF_3717 c4bb4dbf44728ce667e450480330540b 297 SUPERFAMILY SSF46689 224 269 3.94E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_3717 c4bb4dbf44728ce667e450480330540b 297 Pfam PF13556 PucR C-terminal helix-turn-helix domain 235 288 6.5E-14 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BAMF_3169 4f4ac9fe0ce0e88a65195dba469194a8 267 Gene3D G3DSA:3.40.50.300 3 257 8.5E-69 T 12-10-2018 BAMF_3169 4f4ac9fe0ce0e88a65195dba469194a8 267 SUPERFAMILY SSF52540 4 229 5.33E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3169 4f4ac9fe0ce0e88a65195dba469194a8 267 SMART SM00382 28 217 5.1E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3169 4f4ac9fe0ce0e88a65195dba469194a8 267 Pfam PF00005 ABC transporter 20 167 1.4E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3169 4f4ac9fe0ce0e88a65195dba469194a8 267 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_2206 241c44b124fcc9efbd404ab402f05baf 190 PIRSF PIRSF037778 1 186 2.7E-47 T 12-10-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 BAMF_2206 241c44b124fcc9efbd404ab402f05baf 190 Gene3D G3DSA:1.10.1760.20 1 189 1.6E-51 T 12-10-2018 BAMF_2206 241c44b124fcc9efbd404ab402f05baf 190 Pfam PF12822 ECF transporter, substrate-specific component 4 172 1.5E-23 T 12-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 BAMF_3183 151cb323ae8e1a0779986593d40e4dfd 370 Pfam PF07730 Histidine kinase 180 246 1.0E-14 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BAMF_3183 151cb323ae8e1a0779986593d40e4dfd 370 Gene3D G3DSA:3.30.565.10 252 369 9.0E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3183 151cb323ae8e1a0779986593d40e4dfd 370 SUPERFAMILY SSF55874 258 368 5.35E-8 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2850 852284657a6649cf109e78569471b48a 157 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 148 2.0E-76 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BAMF_2850 852284657a6649cf109e78569471b48a 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 3.8E-40 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BAMF_2850 852284657a6649cf109e78569471b48a 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 3.8E-40 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BAMF_2850 852284657a6649cf109e78569471b48a 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 3.8E-40 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BAMF_2850 852284657a6649cf109e78569471b48a 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 78 96 3.8E-40 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BAMF_2850 852284657a6649cf109e78569471b48a 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 119 138 3.8E-40 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BAMF_2850 852284657a6649cf109e78569471b48a 157 Gene3D G3DSA:3.30.1360.80 1 157 1.1E-62 T 12-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BAMF_2850 852284657a6649cf109e78569471b48a 157 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 157 32.424 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BAMF_2850 852284657a6649cf109e78569471b48a 157 SUPERFAMILY SSF63411 4 150 2.75E-58 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BAMF_2850 852284657a6649cf109e78569471b48a 157 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 150 1.0E-50 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BAMF_2850 852284657a6649cf109e78569471b48a 157 PIRSF PIRSF006160 1 156 9.7E-60 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BAMF_2693 1b8dba5d3a4acb28c01fd8cfc00e544c 227 Pfam PF04172 LrgB-like family 10 223 1.8E-69 T 12-10-2018 IPR007300 CidB/LrgB family BAMF_2693 1b8dba5d3a4acb28c01fd8cfc00e544c 227 Hamap MF_01142 Antiholin-like protein LrgB [lrgB]. 1 226 31.736 T 12-10-2018 IPR024891 Antiholin-like protein LrgB BAMF_2330 2aac5be4f4ebfd624a43250ec4d66377 281 SMART SM00363 6 71 1.1E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_2330 2aac5be4f4ebfd624a43250ec4d66377 281 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 7 239 3.7E-98 T 12-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 BAMF_2330 2aac5be4f4ebfd624a43250ec4d66377 281 Pfam PF01728 FtsJ-like methyltransferase 62 245 2.5E-16 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 BAMF_2330 2aac5be4f4ebfd624a43250ec4d66377 281 PIRSF PIRSF005578 1 268 2.1E-106 T 12-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 BAMF_2330 2aac5be4f4ebfd624a43250ec4d66377 281 SUPERFAMILY SSF53335 58 246 7.39E-20 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_2330 2aac5be4f4ebfd624a43250ec4d66377 281 SUPERFAMILY SSF55174 5 71 1.38E-11 T 12-10-2018 BAMF_2330 2aac5be4f4ebfd624a43250ec4d66377 281 Pfam PF01479 S4 domain 6 47 2.4E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_2330 2aac5be4f4ebfd624a43250ec4d66377 281 Gene3D G3DSA:3.10.290.10 2 64 1.4E-23 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BAMF_2330 2aac5be4f4ebfd624a43250ec4d66377 281 Gene3D G3DSA:3.40.50.150 65 280 6.2E-84 T 12-10-2018 BAMF_0992 4a303b80a9fd9fd31dbe59094f6b89c5 237 Pfam PF04519 Polymer-forming cytoskeletal 45 120 5.5E-9 T 12-10-2018 IPR007607 Bactofilin A/B BAMF_0992 4a303b80a9fd9fd31dbe59094f6b89c5 237 Pfam PF04519 Polymer-forming cytoskeletal 5 86 3.9E-8 T 12-10-2018 IPR007607 Bactofilin A/B BAMF_3225 c8d89c81ae0355f49781f9cdd7c1b8a6 257 TIGRFAM TIGR03733 lanti_perm_MutG: lantibiotic protection ABC transporter permease subunit, MutG family 6 253 4.0E-73 T 12-10-2018 IPR022294 Lantibiotic protection ABC transporter permease subunit, MutG family BAMF_3225 c8d89c81ae0355f49781f9cdd7c1b8a6 257 Pfam PF12730 ABC-2 family transporter protein 9 155 2.2E-12 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 BAMF_2851 8ef24775decaafaf20d2f0051ebaa214 75 SMART SM01234 1 68 3.0E-52 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BAMF_2851 8ef24775decaafaf20d2f0051ebaa214 75 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 26.531 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BAMF_2851 8ef24775decaafaf20d2f0051ebaa214 75 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 75 1.3E-40 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BAMF_2851 8ef24775decaafaf20d2f0051ebaa214 75 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 2.0E-24 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BAMF_2851 8ef24775decaafaf20d2f0051ebaa214 75 Pfam PF01809 Haemolytic domain 2 68 1.5E-33 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BAMF_3466 0257871aab6019d6a2b6503cc43f807d 263 SUPERFAMILY SSF103032 5 263 2.22E-85 T 12-10-2018 IPR035948 YwqG-like superfamily BAMF_3466 0257871aab6019d6a2b6503cc43f807d 263 Pfam PF09234 Domain of unknown function (DUF1963) 40 262 8.2E-66 T 12-10-2018 IPR015315 Protein of unknown function DUF1963 BAMF_3466 0257871aab6019d6a2b6503cc43f807d 263 Gene3D G3DSA:2.30.320.10 2 263 8.8E-103 T 12-10-2018 IPR035948 YwqG-like superfamily BAMF_0973 e8c4d70a17523bd9c72a93645d9d783f 318 Gene3D G3DSA:1.10.3720.10 82 311 1.7E-21 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_0973 e8c4d70a17523bd9c72a93645d9d783f 318 SUPERFAMILY SSF161098 89 304 1.31E-18 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_0973 e8c4d70a17523bd9c72a93645d9d783f 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 316 5.1E-43 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_0187 58aebfbb8ad64ca88295de4149dfad1b 281 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 127 144 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BAMF_0187 58aebfbb8ad64ca88295de4149dfad1b 281 PRINTS PR00069 Aldo-keto reductase signature 127 144 5.3E-41 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_0187 58aebfbb8ad64ca88295de4149dfad1b 281 PRINTS PR00069 Aldo-keto reductase signature 199 223 5.3E-41 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_0187 58aebfbb8ad64ca88295de4149dfad1b 281 PRINTS PR00069 Aldo-keto reductase signature 39 63 5.3E-41 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_0187 58aebfbb8ad64ca88295de4149dfad1b 281 PRINTS PR00069 Aldo-keto reductase signature 95 113 5.3E-41 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_0187 58aebfbb8ad64ca88295de4149dfad1b 281 PRINTS PR00069 Aldo-keto reductase signature 161 190 5.3E-41 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_0187 58aebfbb8ad64ca88295de4149dfad1b 281 Pfam PF00248 Aldo/keto reductase family 20 263 7.4E-44 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain BAMF_0187 58aebfbb8ad64ca88295de4149dfad1b 281 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 43 60 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BAMF_0187 58aebfbb8ad64ca88295de4149dfad1b 281 SUPERFAMILY SSF51430 12 267 2.36E-82 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_0187 58aebfbb8ad64ca88295de4149dfad1b 281 PIRSF PIRSF000097 2 281 1.6E-74 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_0187 58aebfbb8ad64ca88295de4149dfad1b 281 Gene3D G3DSA:3.20.20.100 1 278 4.2E-98 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_0187 58aebfbb8ad64ca88295de4149dfad1b 281 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 232 247 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BAMF_2769 584910f7ee7967083ec961594fcf7ad4 210 Gene3D G3DSA:3.40.630.30 1 210 8.1E-88 T 12-10-2018 BAMF_2769 584910f7ee7967083ec961594fcf7ad4 210 PIRSF PIRSF021278 2 210 2.2E-83 T 12-10-2018 IPR024699 Acetoin utilization protein AcuA GO:0019152|GO:0045150 BAMF_2769 584910f7ee7967083ec961594fcf7ad4 210 SUPERFAMILY SSF55729 37 118 2.2E-8 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_2769 584910f7ee7967083ec961594fcf7ad4 210 Pfam PF00583 Acetyltransferase (GNAT) family 45 118 5.6E-6 T 12-10-2018 IPR000182 GNAT domain BAMF_3254 815083449e2c15721135f390daed9b0b 253 Pfam PF00121 Triosephosphate isomerase 5 246 6.5E-95 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3254 815083449e2c15721135f390daed9b0b 253 SUPERFAMILY SSF51351 1 248 7.98E-94 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3254 815083449e2c15721135f390daed9b0b 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.7E-57 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3254 815083449e2c15721135f390daed9b0b 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 61.586 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3254 815083449e2c15721135f390daed9b0b 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3254 815083449e2c15721135f390daed9b0b 253 Gene3D G3DSA:3.20.20.70 2 252 4.9E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_1465 45564ba2850003083a5af0ef64e2b214 281 SUPERFAMILY SSF50151 5 57 2.88E-15 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BAMF_1465 45564ba2850003083a5af0ef64e2b214 281 Pfam PF00874 PRD domain 80 167 3.1E-26 T 12-10-2018 IPR011608 PRD domain GO:0006355 BAMF_1465 45564ba2850003083a5af0ef64e2b214 281 Pfam PF00874 PRD domain 185 275 6.3E-18 T 12-10-2018 IPR011608 PRD domain GO:0006355 BAMF_1465 45564ba2850003083a5af0ef64e2b214 281 SMART SM01061 5 63 1.4E-23 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BAMF_1465 45564ba2850003083a5af0ef64e2b214 281 SUPERFAMILY SSF63520 179 276 7.46E-22 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BAMF_1465 45564ba2850003083a5af0ef64e2b214 281 Gene3D G3DSA:1.10.1790.10 71 169 2.1E-35 T 12-10-2018 BAMF_1465 45564ba2850003083a5af0ef64e2b214 281 SUPERFAMILY SSF63520 59 170 2.09E-31 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BAMF_1465 45564ba2850003083a5af0ef64e2b214 281 Gene3D G3DSA:1.20.890.100 170 225 4.5E-24 T 12-10-2018 BAMF_1465 45564ba2850003083a5af0ef64e2b214 281 Gene3D G3DSA:1.20.58.1950 226 278 1.7E-25 T 12-10-2018 BAMF_1465 45564ba2850003083a5af0ef64e2b214 281 Pfam PF03123 CAT RNA binding domain 6 61 4.1E-21 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BAMF_1465 45564ba2850003083a5af0ef64e2b214 281 Gene3D G3DSA:2.30.24.10 1 70 2.0E-27 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BAMF_0127 e6fd825bab5d87761c28bb8a2b581183 103 SMART SM00739 2 29 5.3E-7 T 12-10-2018 IPR005824 KOW BAMF_0127 e6fd825bab5d87761c28bb8a2b581183 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0127 e6fd825bab5d87761c28bb8a2b581183 103 Pfam PF00467 KOW motif 5 36 7.3E-10 T 12-10-2018 IPR005824 KOW BAMF_0127 e6fd825bab5d87761c28bb8a2b581183 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 100 4.0E-42 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0127 e6fd825bab5d87761c28bb8a2b581183 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 100 1.2E-30 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0127 e6fd825bab5d87761c28bb8a2b581183 103 Gene3D G3DSA:2.30.30.30 1 100 2.3E-43 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 BAMF_0127 e6fd825bab5d87761c28bb8a2b581183 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 95 23.05 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0127 e6fd825bab5d87761c28bb8a2b581183 103 SUPERFAMILY SSF50104 1 100 4.96E-40 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily BAMF_3018 9b8b9f6e5ff2818ee0d2cdfc147f390b 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_3018 9b8b9f6e5ff2818ee0d2cdfc147f390b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.1E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3018 9b8b9f6e5ff2818ee0d2cdfc147f390b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.1E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3018 9b8b9f6e5ff2818ee0d2cdfc147f390b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.1E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3018 9b8b9f6e5ff2818ee0d2cdfc147f390b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.1E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3018 9b8b9f6e5ff2818ee0d2cdfc147f390b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.1E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3018 9b8b9f6e5ff2818ee0d2cdfc147f390b 253 Gene3D G3DSA:3.40.50.720 1 252 2.6E-50 T 12-10-2018 BAMF_3018 9b8b9f6e5ff2818ee0d2cdfc147f390b 253 SUPERFAMILY SSF51735 1 198 9.35E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3018 9b8b9f6e5ff2818ee0d2cdfc147f390b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 4.7E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3018 9b8b9f6e5ff2818ee0d2cdfc147f390b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.7E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3018 9b8b9f6e5ff2818ee0d2cdfc147f390b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.7E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3018 9b8b9f6e5ff2818ee0d2cdfc147f390b 253 Pfam PF00106 short chain dehydrogenase 6 192 1.8E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0043 41836568c0d36da0cc9b5a4b6fa7bddc 291 ProDom PD127708 YABG PROTEASE SPORULATION-SPECIFIC PEPTIDASE U57 BH0058 ORTHOLOG SPORE FAMILY B.SUBTILIS 4 283 7.0E-155 T 12-10-2018 IPR008764 Peptidase U57, YabG BAMF_0043 41836568c0d36da0cc9b5a4b6fa7bddc 291 TIGRFAM TIGR02855 spore_yabG: sporulation peptidase YabG 4 287 3.1E-142 T 12-10-2018 IPR008764 Peptidase U57, YabG BAMF_0043 41836568c0d36da0cc9b5a4b6fa7bddc 291 Pfam PF05582 YabG peptidase U57 4 286 3.6E-118 T 12-10-2018 IPR008764 Peptidase U57, YabG BAMF_0043 41836568c0d36da0cc9b5a4b6fa7bddc 291 PIRSF PIRSF011575 2 291 1.2E-136 T 12-10-2018 IPR008764 Peptidase U57, YabG BAMF_2962 52b545a931d1bd9b20675b3e2eace70c 493 Pfam PF00361 Proton-conducting membrane transporter 127 416 8.2E-48 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_2962 52b545a931d1bd9b20675b3e2eace70c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 8.2E-17 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_2962 52b545a931d1bd9b20675b3e2eace70c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 8.2E-17 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_2962 52b545a931d1bd9b20675b3e2eace70c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 8.2E-17 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_2962 52b545a931d1bd9b20675b3e2eace70c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 8.2E-17 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_2962 52b545a931d1bd9b20675b3e2eace70c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 8.2E-17 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_2962 52b545a931d1bd9b20675b3e2eace70c 493 TIGRFAM TIGR00944 2a6301s04: multicomponent K+:H+antiporter 3 463 2.8E-212 T 12-10-2018 IPR004775 Na(+)/H(+) antiporter subunit D1 GO:0006812|GO:0015386|GO:0016021 BAMF_0847 0f086c72ee7d9ed4d9d9e4d2089829c2 406 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 38 370 7.0E-57 T 12-10-2018 IPR006427 Phage portal protein, HK97 BAMF_0847 0f086c72ee7d9ed4d9d9e4d2089829c2 406 Pfam PF04860 Phage portal protein 40 363 2.0E-58 T 12-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein BAMF_3604 a2b28f5d36e3542590b9e1d9845c59b5 472 Gene3D G3DSA:3.40.50.20 1 136 5.6E-79 T 12-10-2018 BAMF_3604 a2b28f5d36e3542590b9e1d9845c59b5 472 SUPERFAMILY SSF56059 135 358 1.22E-32 T 12-10-2018 BAMF_3604 a2b28f5d36e3542590b9e1d9845c59b5 472 Pfam PF13535 ATP-grasp domain 172 333 3.2E-15 T 12-10-2018 BAMF_3604 a2b28f5d36e3542590b9e1d9845c59b5 472 Gene3D G3DSA:3.90.1170.60 373 468 5.6E-53 T 12-10-2018 BAMF_3604 a2b28f5d36e3542590b9e1d9845c59b5 472 Gene3D G3DSA:3.30.470.20 229 372 1.5E-55 T 12-10-2018 BAMF_3604 a2b28f5d36e3542590b9e1d9845c59b5 472 Gene3D G3DSA:3.30.1490.20 137 228 1.4E-22 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BAMF_1785 8700a24d38410ea050e9c53ac4f261af 249 SUPERFAMILY SSF52096 8 243 7.38E-44 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_1785 8700a24d38410ea050e9c53ac4f261af 249 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 244 3.2E-65 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BAMF_1785 8700a24d38410ea050e9c53ac4f261af 249 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BAMF_1785 8700a24d38410ea050e9c53ac4f261af 249 Gene3D G3DSA:3.90.226.10 1 224 3.3E-64 T 12-10-2018 BAMF_2092 0188771b926415a9b94fc3aa59e9596e 380 Hamap MF_01280 Processive diacylglycerol beta-glucosyltransferase [ugtP]. 1 380 54.201 T 12-10-2018 IPR023589 Processive diacylglycerol beta-glucosyltransferase GO:0047228 KEGG: 00561+2.4.1.315|MetaCyc: PWY-7817 BAMF_2092 0188771b926415a9b94fc3aa59e9596e 380 Pfam PF00534 Glycosyl transferases group 1 183 349 6.6E-18 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 BAMF_2092 0188771b926415a9b94fc3aa59e9596e 380 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 18 178 1.2E-46 T 12-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 BAMF_2092 0188771b926415a9b94fc3aa59e9596e 380 Gene3D G3DSA:3.40.50.2000 188 352 1.8E-34 T 12-10-2018 BAMF_2092 0188771b926415a9b94fc3aa59e9596e 380 SUPERFAMILY SSF53756 5 365 6.09E-44 T 12-10-2018 BAMF_1122 0d844a314cec72a80065da1f4e354368 363 SUPERFAMILY SSF53901 239 361 9.22E-30 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1122 0d844a314cec72a80065da1f4e354368 363 PIRSF PIRSF000429 1 363 1.8E-100 T 12-10-2018 IPR002155 Thiolase GO:0016747 BAMF_1122 0d844a314cec72a80065da1f4e354368 363 Pfam PF00108 Thiolase, N-terminal domain 4 231 1.4E-45 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BAMF_1122 0d844a314cec72a80065da1f4e354368 363 SUPERFAMILY SSF53901 3 238 8.93E-50 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1122 0d844a314cec72a80065da1f4e354368 363 Gene3D G3DSA:3.40.47.10 4 244 4.7E-112 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1122 0d844a314cec72a80065da1f4e354368 363 Pfam PF02803 Thiolase, C-terminal domain 239 360 4.8E-31 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BAMF_1122 0d844a314cec72a80065da1f4e354368 363 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 5 360 1.1E-103 T 12-10-2018 IPR002155 Thiolase GO:0016747 BAMF_1122 0d844a314cec72a80065da1f4e354368 363 Gene3D G3DSA:3.40.47.10 120 358 4.7E-112 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1122 0d844a314cec72a80065da1f4e354368 363 ProSitePatterns PS00737 Thiolases signature 2. 307 323 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 BAMF_0256 3f81f59b06d4b22d4df5854f58afa209 164 Pfam PF13826 Domain of unknown function (DUF4188) 20 135 3.9E-45 T 12-10-2018 IPR025444 Monooxygenase af470-like BAMF_2609 a8dfe172f3145ffded5c972576b93d1d 337 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 184 204 1.0E-60 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_2609 a8dfe172f3145ffded5c972576b93d1d 337 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 297 323 1.0E-60 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_2609 a8dfe172f3145ffded5c972576b93d1d 337 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 129 148 1.0E-60 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_2609 a8dfe172f3145ffded5c972576b93d1d 337 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 44 62 1.0E-60 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_2609 a8dfe172f3145ffded5c972576b93d1d 337 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 64 87 1.0E-60 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_2609 a8dfe172f3145ffded5c972576b93d1d 337 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 7 333 1.4E-162 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_2609 a8dfe172f3145ffded5c972576b93d1d 337 Gene3D G3DSA:3.30.420.40 9 324 1.0E-130 T 12-10-2018 BAMF_2609 a8dfe172f3145ffded5c972576b93d1d 337 Gene3D G3DSA:3.90.640.10 183 256 1.0E-130 T 12-10-2018 BAMF_2609 a8dfe172f3145ffded5c972576b93d1d 337 SUPERFAMILY SSF53067 147 329 8.99E-51 T 12-10-2018 BAMF_2609 a8dfe172f3145ffded5c972576b93d1d 337 Gene3D G3DSA:3.30.420.40 151 314 1.0E-130 T 12-10-2018 BAMF_2609 a8dfe172f3145ffded5c972576b93d1d 337 Pfam PF06723 MreB/Mbl protein 7 331 2.6E-151 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_2609 a8dfe172f3145ffded5c972576b93d1d 337 SUPERFAMILY SSF53067 8 144 1.64E-37 T 12-10-2018 BAMF_3378 4c0f2668a06135445c04245669f5eac5 74 SUPERFAMILY SSF117130 1 55 3.53E-20 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 BAMF_3378 4c0f2668a06135445c04245669f5eac5 74 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 66 2.1E-31 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BAMF_3378 4c0f2668a06135445c04245669f5eac5 74 Pfam PF02599 Global regulator protein family 1 51 1.9E-25 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BAMF_3378 4c0f2668a06135445c04245669f5eac5 74 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-17 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BAMF_3378 4c0f2668a06135445c04245669f5eac5 74 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 72 17.413 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BAMF_3378 4c0f2668a06135445c04245669f5eac5 74 Gene3D G3DSA:3.30.70.1680 1 63 1.3E-28 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 BAMF_2301 30f8bc70606620626fe62b0e5d9911a6 327 SUPERFAMILY SSF52922 188 325 1.7E-40 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BAMF_2301 30f8bc70606620626fe62b0e5d9911a6 327 SMART SM00861 4 179 2.3E-71 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BAMF_2301 30f8bc70606620626fe62b0e5d9911a6 327 Pfam PF02780 Transketolase, C-terminal domain 194 316 1.3E-41 T 12-10-2018 IPR033248 Transketolase, C-terminal domain BAMF_2301 30f8bc70606620626fe62b0e5d9911a6 327 Gene3D G3DSA:3.40.50.920 193 327 7.7E-43 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BAMF_2301 30f8bc70606620626fe62b0e5d9911a6 327 Gene3D G3DSA:3.40.50.970 1 192 2.6E-94 T 12-10-2018 BAMF_2301 30f8bc70606620626fe62b0e5d9911a6 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 2.3E-51 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BAMF_2301 30f8bc70606620626fe62b0e5d9911a6 327 SUPERFAMILY SSF52518 1 204 6.96E-74 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_2185 d8d9d29015d7c7c29db1eb055ac30cc8 436 SUPERFAMILY SSF52540 5 166 1.6E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2185 d8d9d29015d7c7c29db1eb055ac30cc8 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 4.6E-178 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BAMF_2185 d8d9d29015d7c7c29db1eb055ac30cc8 436 Gene3D G3DSA:3.40.50.300 1 163 1.4E-46 T 12-10-2018 BAMF_2185 d8d9d29015d7c7c29db1eb055ac30cc8 436 PIRSF PIRSF006485 2 436 4.9E-174 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BAMF_2185 d8d9d29015d7c7c29db1eb055ac30cc8 436 Gene3D G3DSA:3.40.50.300 169 352 3.1E-55 T 12-10-2018 BAMF_2185 d8d9d29015d7c7c29db1eb055ac30cc8 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 125 3.6E-23 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BAMF_2185 d8d9d29015d7c7c29db1eb055ac30cc8 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 180 324 5.4E-25 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BAMF_2185 d8d9d29015d7c7c29db1eb055ac30cc8 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 7.5E-26 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_2185 d8d9d29015d7c7c29db1eb055ac30cc8 436 Pfam PF01926 50S ribosome-binding GTPase 178 295 8.3E-25 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_2185 d8d9d29015d7c7c29db1eb055ac30cc8 436 SUPERFAMILY SSF52540 138 434 9.29E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2185 d8d9d29015d7c7c29db1eb055ac30cc8 436 Hamap MF_00195 GTPase Der [der]. 3 436 40.8 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BAMF_2185 d8d9d29015d7c7c29db1eb055ac30cc8 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 433 3.7E-35 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like BAMF_2185 d8d9d29015d7c7c29db1eb055ac30cc8 436 Gene3D G3DSA:3.30.300.20 353 436 5.6E-37 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BAMF_1438 7e7056ec30aae7a33e6641132ef15a12 394 PIRSF PIRSF031134 4 393 6.4E-152 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 BAMF_1438 7e7056ec30aae7a33e6641132ef15a12 394 Pfam PF01636 Phosphotransferase enzyme family 35 269 5.9E-14 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase BAMF_1438 7e7056ec30aae7a33e6641132ef15a12 394 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 36 390 4.7E-160 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 BAMF_1438 7e7056ec30aae7a33e6641132ef15a12 394 SUPERFAMILY SSF56112 7 389 2.04E-92 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BAMF_1438 7e7056ec30aae7a33e6641132ef15a12 394 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 394 186.956 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 BAMF_1438 7e7056ec30aae7a33e6641132ef15a12 394 Gene3D G3DSA:3.90.1200.10 120 394 7.3E-104 T 12-10-2018 BAMF_1438 7e7056ec30aae7a33e6641132ef15a12 394 Gene3D G3DSA:3.30.200.20 1 119 1.1E-48 T 12-10-2018 BAMF_1738 50c3bf764ca0dceac56365581a44ab67 309 Gene3D G3DSA:3.30.2350.10 1 244 8.6E-91 T 12-10-2018 BAMF_1738 50c3bf764ca0dceac56365581a44ab67 309 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 2 217 2.1E-89 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_1738 50c3bf764ca0dceac56365581a44ab67 309 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 179 237 1.4E-12 T 12-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 BAMF_1738 50c3bf764ca0dceac56365581a44ab67 309 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 24 178 2.3E-57 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 BAMF_1738 50c3bf764ca0dceac56365581a44ab67 309 SUPERFAMILY SSF55120 1 220 3.36E-79 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_1738 50c3bf764ca0dceac56365581a44ab67 309 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 303 19.059 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_2860 26100958c40197b7e0af722bd8295ed1 272 TIGRFAM TIGR01929 menB: naphthoate synthase 11 268 5.3E-131 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 BAMF_2860 26100958c40197b7e0af722bd8295ed1 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BAMF_2860 26100958c40197b7e0af722bd8295ed1 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 267 6.2E-92 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BAMF_2860 26100958c40197b7e0af722bd8295ed1 272 SUPERFAMILY SSF52096 8 267 1.42E-78 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_2860 26100958c40197b7e0af722bd8295ed1 272 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 5 271 55.7 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 BAMF_2860 26100958c40197b7e0af722bd8295ed1 272 Gene3D G3DSA:3.90.226.10 1 209 8.6E-78 T 12-10-2018 BAMF_2860 26100958c40197b7e0af722bd8295ed1 272 Gene3D G3DSA:1.10.12.10 210 260 2.8E-28 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal BAMF_0175 927b76f7a734f38aac9481e0b5654c58 150 Pfam PF04463 Protein of unknown function (DUF523) 2 146 1.3E-40 T 12-10-2018 IPR007553 Domain of unknown function DUF523 BAMF_2344 b1999c1294a4d21bb098bb5e3ffec505 100 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 2 98 2.0E-39 T 12-10-2018 IPR014211 Stage III sporulation protein AD BAMF_2344 b1999c1294a4d21bb098bb5e3ffec505 100 Pfam PF06686 Stage III sporulation protein AC/AD protein family 42 96 3.8E-20 T 12-10-2018 IPR025664 Stage III sporulation protein AC/AD family BAMF_1634 e8eff6390bc6dcbe2df0813db57b7278 162 Gene3D G3DSA:3.40.50.720 1 127 1.2E-39 T 12-10-2018 BAMF_1634 e8eff6390bc6dcbe2df0813db57b7278 162 SUPERFAMILY SSF75615 106 161 5.1E-11 T 12-10-2018 BAMF_1634 e8eff6390bc6dcbe2df0813db57b7278 162 SUPERFAMILY SSF51735 1 97 1.14E-18 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1634 e8eff6390bc6dcbe2df0813db57b7278 162 Pfam PF13241 Putative NAD(P)-binding 5 111 4.0E-26 T 12-10-2018 BAMF_1634 e8eff6390bc6dcbe2df0813db57b7278 162 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 2 160 4.4E-32 T 12-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BAMF_1483 24bedd7bda0ef5f4bbb11607f692b76a 254 SUPERFAMILY SSF51735 3 249 5.06E-79 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1483 24bedd7bda0ef5f4bbb11607f692b76a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.7E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1483 24bedd7bda0ef5f4bbb11607f692b76a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.7E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1483 24bedd7bda0ef5f4bbb11607f692b76a 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.7E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1483 24bedd7bda0ef5f4bbb11607f692b76a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.1E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1483 24bedd7bda0ef5f4bbb11607f692b76a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.1E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1483 24bedd7bda0ef5f4bbb11607f692b76a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.1E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1483 24bedd7bda0ef5f4bbb11607f692b76a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.1E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1483 24bedd7bda0ef5f4bbb11607f692b76a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.1E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1483 24bedd7bda0ef5f4bbb11607f692b76a 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1483 24bedd7bda0ef5f4bbb11607f692b76a 254 Gene3D G3DSA:3.40.50.720 1 250 1.2E-77 T 12-10-2018 BAMF_1483 24bedd7bda0ef5f4bbb11607f692b76a 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 2.9E-55 T 12-10-2018 BAMF_2523 5b2d3cd109409594514a5123f57da16a 188 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 53 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BAMF_2523 5b2d3cd109409594514a5123f57da16a 188 Gene3D G3DSA:1.10.357.10 2 187 1.9E-47 T 12-10-2018 BAMF_2523 5b2d3cd109409594514a5123f57da16a 188 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 57 186 3.2E-44 T 12-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal BAMF_2523 5b2d3cd109409594514a5123f57da16a 188 SUPERFAMILY SSF46689 4 69 4.54E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_2523 5b2d3cd109409594514a5123f57da16a 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 3.1E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_2523 5b2d3cd109409594514a5123f57da16a 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 3.1E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_2523 5b2d3cd109409594514a5123f57da16a 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 54 2.4E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_2261 d4580077ea60543253fe58080ea16a4d 75 Pfam PF13025 Protein of unknown function (DUF3886) 8 73 1.6E-21 T 12-10-2018 IPR024980 Protein of unknown function DUF3886 BAMF_1145 cdcec815684f77fa9ce6f6725c81f600 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.6E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_1145 cdcec815684f77fa9ce6f6725c81f600 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.6E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_1145 cdcec815684f77fa9ce6f6725c81f600 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 9.7E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_1145 cdcec815684f77fa9ce6f6725c81f600 206 Pfam PF08360 QacR-like protein, C-terminal region 73 196 6.1E-23 T 12-10-2018 IPR013571 Transcription regulator QacR, C-terminal GO:0003700|GO:0045892 BAMF_1145 cdcec815684f77fa9ce6f6725c81f600 206 Gene3D G3DSA:1.10.10.60 13 61 2.7E-19 T 12-10-2018 BAMF_1145 cdcec815684f77fa9ce6f6725c81f600 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 60 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BAMF_1145 cdcec815684f77fa9ce6f6725c81f600 206 Gene3D G3DSA:1.10.357.10 62 204 1.5E-34 T 12-10-2018 BAMF_1145 cdcec815684f77fa9ce6f6725c81f600 206 SUPERFAMILY SSF46689 10 89 1.85E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_1145 cdcec815684f77fa9ce6f6725c81f600 206 SUPERFAMILY SSF48498 85 196 6.23E-40 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BAMF_3913 a8b1edae3f50fbbd9811c5b32445d6cf 283 Gene3D G3DSA:3.90.1530.30 38 100 3.5E-28 T 12-10-2018 BAMF_3913 a8b1edae3f50fbbd9811c5b32445d6cf 283 SMART SM00470 25 114 2.1E-38 T 12-10-2018 IPR003115 ParB/Sulfiredoxin BAMF_3913 a8b1edae3f50fbbd9811c5b32445d6cf 283 SUPERFAMILY SSF109709 107 217 1.49E-34 T 12-10-2018 BAMF_3913 a8b1edae3f50fbbd9811c5b32445d6cf 283 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 21 197 1.6E-67 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 BAMF_3913 a8b1edae3f50fbbd9811c5b32445d6cf 283 Gene3D G3DSA:1.10.10.2830 101 215 7.9E-36 T 12-10-2018 BAMF_3913 a8b1edae3f50fbbd9811c5b32445d6cf 283 SUPERFAMILY SSF110849 25 116 1.07E-28 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily BAMF_3913 a8b1edae3f50fbbd9811c5b32445d6cf 283 Pfam PF02195 ParB-like nuclease domain 25 113 5.6E-27 T 12-10-2018 IPR003115 ParB/Sulfiredoxin BAMF_2500 de2ef8b38cb893f6d2d7bcc41785f769 280 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 5 225 1.0E-52 T 12-10-2018 IPR005181 Sialate O-acetylesterase domain BAMF_2500 de2ef8b38cb893f6d2d7bcc41785f769 280 SUPERFAMILY SSF52266 2 273 9.31E-79 T 12-10-2018 BAMF_2500 de2ef8b38cb893f6d2d7bcc41785f769 280 Gene3D G3DSA:3.40.50.1110 1 248 1.0E-86 T 12-10-2018 IPR036514 SGNH hydrolase superfamily BAMF_2500 de2ef8b38cb893f6d2d7bcc41785f769 280 Gene3D G3DSA:1.10.1200.110 249 279 3.2E-7 T 12-10-2018 BAMF_2132 e70cb6a9f1b3f95e335d8441634fdb97 926 Gene3D G3DSA:1.10.3810.10 97 289 1.0E-208 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_2132 e70cb6a9f1b3f95e335d8441634fdb97 926 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 97 650 6.2E-175 T 12-10-2018 BAMF_2132 e70cb6a9f1b3f95e335d8441634fdb97 926 Gene3D G3DSA:3.90.1310.20 82 545 1.0E-208 T 12-10-2018 BAMF_2132 e70cb6a9f1b3f95e335d8441634fdb97 926 Gene3D G3DSA:2.60.40.10 708 803 1.2E-10 T 12-10-2018 IPR013783 Immunoglobulin-like fold BAMF_2132 e70cb6a9f1b3f95e335d8441634fdb97 926 SUPERFAMILY SSF56601 244 708 8.83E-104 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_2132 e70cb6a9f1b3f95e335d8441634fdb97 926 Pfam PF00905 Penicillin binding protein transpeptidase domain 357 647 1.3E-49 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BAMF_2132 e70cb6a9f1b3f95e335d8441634fdb97 926 Gene3D G3DSA:3.40.710.10 333 661 1.0E-208 T 12-10-2018 BAMF_2132 e70cb6a9f1b3f95e335d8441634fdb97 926 Pfam PF00912 Transglycosylase 87 262 5.8E-63 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_2132 e70cb6a9f1b3f95e335d8441634fdb97 926 SUPERFAMILY SSF49265 711 790 1.52E-8 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 BAMF_2132 e70cb6a9f1b3f95e335d8441634fdb97 926 SUPERFAMILY SSF53955 75 281 3.37E-73 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BAMF_2132 e70cb6a9f1b3f95e335d8441634fdb97 926 SMART SM00060 710 785 8.6E-5 T 12-10-2018 IPR003961 Fibronectin type III GO:0005515 BAMF_3203 059e0d9417a34e34583aa9110aef101f 442 SUPERFAMILY SSF51679 7 431 1.7E-132 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_3203 059e0d9417a34e34583aa9110aef101f 442 PIRSF PIRSF000337 2 436 1.0E-141 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 BAMF_3203 059e0d9417a34e34583aa9110aef101f 442 Pfam PF00296 Luciferase-like monooxygenase 22 380 1.0E-62 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BAMF_3203 059e0d9417a34e34583aa9110aef101f 442 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 9 425 5.5E-160 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 BAMF_3203 059e0d9417a34e34583aa9110aef101f 442 Gene3D G3DSA:3.20.20.30 323 432 5.8E-31 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_3203 059e0d9417a34e34583aa9110aef101f 442 Gene3D G3DSA:3.20.20.30 1 316 1.8E-130 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_1933 3cf6f8639601d9116387738871b70c0f 449 Gene3D G3DSA:3.30.300.310 344 446 3.5E-34 T 12-10-2018 BAMF_1933 3cf6f8639601d9116387738871b70c0f 449 Gene3D G3DSA:3.40.50.980 115 257 4.5E-97 T 12-10-2018 BAMF_1933 3cf6f8639601d9116387738871b70c0f 449 Gene3D G3DSA:3.40.50.980 45 114 4.5E-97 T 12-10-2018 BAMF_1933 3cf6f8639601d9116387738871b70c0f 449 SUPERFAMILY SSF56801 2 443 3.79E-129 T 12-10-2018 BAMF_1933 3cf6f8639601d9116387738871b70c0f 449 Pfam PF13193 AMP-binding enzyme C-terminal domain 357 432 2.2E-20 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_1933 3cf6f8639601d9116387738871b70c0f 449 ProSitePatterns PS00455 Putative AMP-binding domain signature. 98 109 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_1933 3cf6f8639601d9116387738871b70c0f 449 Gene3D G3DSA:2.30.38.10 258 341 4.5E-97 T 12-10-2018 BAMF_1933 3cf6f8639601d9116387738871b70c0f 449 Pfam PF00501 AMP-binding enzyme 2 348 1.2E-81 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_2153 cec14faf7fa1a5c3a68dc549b7eb4311 260 Pfam PF09577 Sporulation protein YpjB (SpoYpjB) 28 253 4.1E-83 T 12-10-2018 IPR014231 Sporulation protein YpjB BAMF_2153 cec14faf7fa1a5c3a68dc549b7eb4311 260 TIGRFAM TIGR02878 spore_ypjB: sporulation protein YpjB 28 254 1.8E-88 T 12-10-2018 IPR014231 Sporulation protein YpjB BAMF_0238 5519d3700e3b7c3240bb5aaf16a6f590 65 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 47 7.4E-17 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BAMF_0238 5519d3700e3b7c3240bb5aaf16a6f590 65 Pfam PF02416 mttA/Hcf106 family 5 54 6.7E-21 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 BAMF_0238 5519d3700e3b7c3240bb5aaf16a6f590 65 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 1.7E-5 T 12-10-2018 BAMF_0238 5519d3700e3b7c3240bb5aaf16a6f590 65 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 1.7E-5 T 12-10-2018 BAMF_0238 5519d3700e3b7c3240bb5aaf16a6f590 65 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 64 16.758 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BAMF_0269 ec74057ec2623f598a6adb843d145f54 418 Pfam PF00005 ABC transporter 50 197 2.0E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0269 ec74057ec2623f598a6adb843d145f54 418 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 41 396 1.6E-175 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 BAMF_0269 ec74057ec2623f598a6adb843d145f54 418 SMART SM00382 58 247 3.7E-21 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0269 ec74057ec2623f598a6adb843d145f54 418 SMART SM00116 347 394 0.0033 T 12-10-2018 IPR000644 CBS domain BAMF_0269 ec74057ec2623f598a6adb843d145f54 418 SMART SM00116 287 335 3.2E-4 T 12-10-2018 IPR000644 CBS domain BAMF_0269 ec74057ec2623f598a6adb843d145f54 418 SUPERFAMILY SSF52540 40 275 9.93E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0269 ec74057ec2623f598a6adb843d145f54 418 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0269 ec74057ec2623f598a6adb843d145f54 418 Gene3D G3DSA:3.40.50.300 3 274 1.4E-71 T 12-10-2018 BAMF_0269 ec74057ec2623f598a6adb843d145f54 418 Pfam PF00571 CBS domain 282 333 0.0056 T 12-10-2018 IPR000644 CBS domain BAMF_0269 ec74057ec2623f598a6adb843d145f54 418 Pfam PF00571 CBS domain 342 394 3.7E-4 T 12-10-2018 IPR000644 CBS domain BAMF_0269 ec74057ec2623f598a6adb843d145f54 418 SUPERFAMILY SSF54631 279 395 1.89E-18 T 12-10-2018 BAMF_0269 ec74057ec2623f598a6adb843d145f54 418 Gene3D G3DSA:3.10.580.10 283 395 1.4E-16 T 12-10-2018 BAMF_2056 4e158ac9873e337cb6b130d509f9f62e 45 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 19 44 5.6E-13 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BAMF_2056 4e158ac9873e337cb6b130d509f9f62e 45 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 21 44 4.4E-11 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BAMF_1021 fb30b5dce662333db3ee14ff4bef092d 512 SUPERFAMILY SSF56317 228 495 5.49E-59 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BAMF_1021 fb30b5dce662333db3ee14ff4bef092d 512 Gene3D G3DSA:3.40.630.30 7 224 9.1E-63 T 12-10-2018 BAMF_1021 fb30b5dce662333db3ee14ff4bef092d 512 Pfam PF00583 Acetyltransferase (GNAT) family 25 147 1.1E-12 T 12-10-2018 IPR000182 GNAT domain BAMF_1021 fb30b5dce662333db3ee14ff4bef092d 512 Pfam PF00795 Carbon-nitrogen hydrolase 230 487 9.7E-31 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BAMF_1021 fb30b5dce662333db3ee14ff4bef092d 512 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 374 394 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site BAMF_1021 fb30b5dce662333db3ee14ff4bef092d 512 SUPERFAMILY SSF55729 16 144 2.57E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_1021 fb30b5dce662333db3ee14ff4bef092d 512 Gene3D G3DSA:3.60.110.10 227 511 6.4E-58 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BAMF_1090 6fd2e6460a4e4a7d8c55cfb37c3ba241 176 Pfam PF11667 Putative zincin peptidase 59 157 7.8E-19 T 12-10-2018 IPR021683 Putative zincin peptidase BAMF_1242 66031cff1867135fbf987a96369c7511 67 Pfam PF02597 ThiS family 7 67 1.6E-13 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 BAMF_1242 66031cff1867135fbf987a96369c7511 67 SUPERFAMILY SSF54285 3 66 3.6E-18 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BAMF_1242 66031cff1867135fbf987a96369c7511 67 Gene3D G3DSA:3.10.20.30 2 67 1.9E-20 T 12-10-2018 IPR012675 Beta-grasp domain superfamily BAMF_1242 66031cff1867135fbf987a96369c7511 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 67 1.1E-23 T 12-10-2018 IPR010035 ThiS, thiamine-biosynthesis BAMF_2966 52c7b0ce43471c38abc8438308f80fdf 127 SUPERFAMILY SSF54637 4 126 4.27E-32 T 12-10-2018 IPR029069 HotDog domain superfamily BAMF_2966 52c7b0ce43471c38abc8438308f80fdf 127 Pfam PF03061 Thioesterase superfamily 37 116 7.3E-19 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BAMF_2966 52c7b0ce43471c38abc8438308f80fdf 127 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 7 124 1.6E-43 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 BAMF_2966 52c7b0ce43471c38abc8438308f80fdf 127 Gene3D G3DSA:3.10.129.10 1 127 6.2E-50 T 12-10-2018 BAMF_0482 932e91f4f8e831e249ff000dec223ef8 460 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 3.8E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0482 932e91f4f8e831e249ff000dec223ef8 460 SUPERFAMILY SSF53383 82 458 4.87E-77 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_0482 932e91f4f8e831e249ff000dec223ef8 460 Gene3D G3DSA:1.10.10.10 6 84 4.4E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0482 932e91f4f8e831e249ff000dec223ef8 460 SUPERFAMILY SSF46785 8 81 1.41E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0482 932e91f4f8e831e249ff000dec223ef8 460 Gene3D G3DSA:3.40.640.10 90 453 3.1E-108 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_0482 932e91f4f8e831e249ff000dec223ef8 460 SMART SM00345 18 77 8.3E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_0482 932e91f4f8e831e249ff000dec223ef8 460 Pfam PF00155 Aminotransferase class I and II 113 451 1.7E-25 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_0447 179ed77f0f6574ddb3da9a2206390bc9 335 SUPERFAMILY SSF81606 127 332 6.67E-9 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_0447 179ed77f0f6574ddb3da9a2206390bc9 335 ProDom PD685490 RSBU REGULATOR SIGMA REGULATION FACTOR B PHOSPHATASE SIGMAB INDIRECT SIGMA-B 5 91 5.0E-43 T 12-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 BAMF_0447 179ed77f0f6574ddb3da9a2206390bc9 335 SUPERFAMILY SSF101215 2 84 3.27E-30 T 12-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 BAMF_0447 179ed77f0f6574ddb3da9a2206390bc9 335 Gene3D G3DSA:1.10.1240.30 1 84 1.2E-34 T 12-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 BAMF_0447 179ed77f0f6574ddb3da9a2206390bc9 335 SMART SM00331 119 333 9.9E-73 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_0447 179ed77f0f6574ddb3da9a2206390bc9 335 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 146 333 2.0E-51 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_0447 179ed77f0f6574ddb3da9a2206390bc9 335 Pfam PF08673 Phosphoserine phosphatase RsbU, N-terminal domain 9 83 2.3E-30 T 12-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 BAMF_0447 179ed77f0f6574ddb3da9a2206390bc9 335 Gene3D G3DSA:3.60.40.10 86 335 1.1E-56 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_2277 2f581e312781583ba2bf2371b7f31a80 280 SUPERFAMILY SSF51735 2 157 4.43E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2277 2f581e312781583ba2bf2371b7f31a80 280 Gene3D G3DSA:1.10.3730.10 163 270 1.1E-39 T 12-10-2018 BAMF_2277 2f581e312781583ba2bf2371b7f31a80 280 Gene3D G3DSA:3.40.50.720 1 162 3.0E-48 T 12-10-2018 BAMF_2277 2f581e312781583ba2bf2371b7f31a80 280 SUPERFAMILY SSF48179 160 268 1.17E-33 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_2277 2f581e312781583ba2bf2371b7f31a80 280 PIRSF PIRSF000193 1 268 1.2E-80 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BAMF_2277 2f581e312781583ba2bf2371b7f31a80 280 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 265 1.7E-84 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BAMF_2277 2f581e312781583ba2bf2371b7f31a80 280 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 161 264 5.6E-36 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BAMF_2277 2f581e312781583ba2bf2371b7f31a80 280 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 98 2.9E-22 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BAMF_2277 2f581e312781583ba2bf2371b7f31a80 280 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 221 243 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BAMF_2277 2f581e312781583ba2bf2371b7f31a80 280 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 265 26.06 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BAMF_1003 e6e81c053d59a1cd23754cb1860db73a 244 Gene3D G3DSA:3.40.50.300 1 241 6.7E-54 T 12-10-2018 BAMF_1003 e6e81c053d59a1cd23754cb1860db73a 244 SMART SM00382 33 209 6.0E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1003 e6e81c053d59a1cd23754cb1860db73a 244 Pfam PF00005 ABC transporter 25 159 1.1E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1003 e6e81c053d59a1cd23754cb1860db73a 244 SUPERFAMILY SSF52540 7 232 1.5E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1003 e6e81c053d59a1cd23754cb1860db73a 244 PRINTS PR01868 ABC transporter family E signature 90 116 1.2E-8 T 12-10-2018 IPR013283 RLI1 Reactome: R-HSA-909733 BAMF_1003 e6e81c053d59a1cd23754cb1860db73a 244 PRINTS PR01868 ABC transporter family E signature 38 63 1.2E-8 T 12-10-2018 IPR013283 RLI1 Reactome: R-HSA-909733 BAMF_0142 0d2715c142930f3e946f1b15ea062c80 131 Pfam PF00411 Ribosomal protein S11 21 130 8.0E-52 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BAMF_0142 0d2715c142930f3e946f1b15ea062c80 131 SUPERFAMILY SSF53137 16 131 2.55E-49 T 12-10-2018 BAMF_0142 0d2715c142930f3e946f1b15ea062c80 131 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 128 2.3E-58 T 12-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0142 0d2715c142930f3e946f1b15ea062c80 131 Gene3D G3DSA:3.30.420.80 3 131 4.8E-54 T 12-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 BAMF_0142 0d2715c142930f3e946f1b15ea062c80 131 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 5 131 34.341 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BAMF_0142 0d2715c142930f3e946f1b15ea062c80 131 PIRSF PIRSF002131 1 131 1.6E-53 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BAMF_0142 0d2715c142930f3e946f1b15ea062c80 131 ProSitePatterns PS00054 Ribosomal protein S11 signature. 99 121 - T 12-10-2018 IPR018102 Ribosomal S11, conserved site BAMF_0233 7161078583970a7ea796a0b33f4d673c 129 Pfam PF07681 DoxX 5 93 1.8E-19 T 12-10-2018 IPR032808 DoxX family BAMF_0658 3c8390bc06d1f9bf9e63b09174a25307 398 PIRSF PIRSF012509 2 398 4.6E-161 T 12-10-2018 IPR011426 CamS sex pheromone cAM373 BAMF_0658 3c8390bc06d1f9bf9e63b09174a25307 398 Pfam PF07537 CamS sex pheromone cAM373 precursor 62 391 2.1E-127 T 12-10-2018 IPR011426 CamS sex pheromone cAM373 BAMF_0658 3c8390bc06d1f9bf9e63b09174a25307 398 Gene3D G3DSA:3.10.570.10 59 398 7.3E-134 T 12-10-2018 BAMF_1969 c10e8ee97b87cfb18736195e10ecde8f 380 Gene3D G3DSA:1.20.1250.20 213 377 3.0E-12 T 12-10-2018 BAMF_1969 c10e8ee97b87cfb18736195e10ecde8f 380 Gene3D G3DSA:1.20.1250.20 9 203 2.3E-17 T 12-10-2018 BAMF_1969 c10e8ee97b87cfb18736195e10ecde8f 380 SUPERFAMILY SSF103473 9 375 1.24E-39 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_1969 c10e8ee97b87cfb18736195e10ecde8f 380 TIGRFAM TIGR00897 2A0118: polyol permease 1 376 1.3E-184 T 12-10-2018 IPR004748 Polyol permease GO:0016021|GO:0022857|GO:0055085 BAMF_1969 c10e8ee97b87cfb18736195e10ecde8f 380 Pfam PF07690 Major Facilitator Superfamily 15 363 1.5E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_2112 195d8e0ce8baa476de7c5ada2e49023b 500 Gene3D G3DSA:1.10.1370.30 1 500 3.4E-213 T 12-10-2018 BAMF_2112 195d8e0ce8baa476de7c5ada2e49023b 500 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 1 495 1.1E-303 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BAMF_2112 195d8e0ce8baa476de7c5ada2e49023b 500 SUPERFAMILY SSF55486 6 495 5.01E-112 T 12-10-2018 BAMF_2112 195d8e0ce8baa476de7c5ada2e49023b 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 228 244 3.3E-89 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BAMF_2112 195d8e0ce8baa476de7c5ada2e49023b 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 402 423 3.3E-89 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BAMF_2112 195d8e0ce8baa476de7c5ada2e49023b 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 265 284 3.3E-89 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BAMF_2112 195d8e0ce8baa476de7c5ada2e49023b 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 379 396 3.3E-89 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BAMF_2112 195d8e0ce8baa476de7c5ada2e49023b 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 333 352 3.3E-89 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BAMF_2112 195d8e0ce8baa476de7c5ada2e49023b 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 148 168 3.3E-89 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BAMF_2112 195d8e0ce8baa476de7c5ada2e49023b 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 447 465 3.3E-89 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BAMF_2112 195d8e0ce8baa476de7c5ada2e49023b 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 245 264 3.3E-89 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BAMF_2112 195d8e0ce8baa476de7c5ada2e49023b 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 292 308 3.3E-89 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BAMF_2112 195d8e0ce8baa476de7c5ada2e49023b 500 PIRSF PIRSF006615 2 500 4.1E-200 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BAMF_1229 4fdbf7198c620f8a56455c4c53e7247e 300 Gene3D G3DSA:3.40.30.10 26 196 1.8E-33 T 12-10-2018 BAMF_1229 4fdbf7198c620f8a56455c4c53e7247e 300 Gene3D G3DSA:1.10.472.60 61 186 1.8E-33 T 12-10-2018 BAMF_1229 4fdbf7198c620f8a56455c4c53e7247e 300 Pfam PF13743 Thioredoxin 24 216 1.1E-73 T 12-10-2018 BAMF_1229 4fdbf7198c620f8a56455c4c53e7247e 300 SUPERFAMILY SSF52833 19 224 1.66E-29 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 SUPERFAMILY SSF50998 82 266 5.81E-23 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 Gene3D G3DSA:2.40.10.480 80 136 2.8E-6 T 12-10-2018 BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 SUPERFAMILY SSF50998 210 407 3.41E-27 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 Pfam PF13570 PQQ-like domain 256 292 4.4E-6 T 12-10-2018 IPR025666 Pyrrolo-quinoline quinone-like domain BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 Pfam PF13570 PQQ-like domain 216 254 2.2E-5 T 12-10-2018 IPR025666 Pyrrolo-quinoline quinone-like domain BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 SMART SM00564 352 383 1.5E-8 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 SMART SM00564 105 136 0.0081 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 SMART SM00564 146 178 8.4E-4 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 SMART SM00564 272 303 1.0E-8 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 SMART SM00564 187 222 8.4E-5 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 SMART SM00564 312 343 8.8E-5 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 SMART SM00564 231 263 1.7E-6 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 Pfam PF13360 PQQ-like domain 295 410 4.9E-13 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 Pfam PF13360 PQQ-like domain 84 198 8.3E-9 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 Gene3D G3DSA:2.130.10.10 293 414 1.2E-26 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BAMF_3799 a8540ae7b07f69bce7ef2ed07310e6d6 415 Gene3D G3DSA:2.130.10.10 137 292 3.0E-29 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BAMF_0347 700ca8578b61e90071497ce3123bcd77 454 SUPERFAMILY SSF55021 372 449 4.45E-21 T 12-10-2018 BAMF_0347 700ca8578b61e90071497ce3123bcd77 454 Gene3D G3DSA:1.20.120.1320 39 135 1.4E-73 T 12-10-2018 BAMF_0347 700ca8578b61e90071497ce3123bcd77 454 SUPERFAMILY SSF53633 1 289 9.86E-67 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BAMF_0347 700ca8578b61e90071497ce3123bcd77 454 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_0347 700ca8578b61e90071497ce3123bcd77 454 Gene3D G3DSA:3.30.2130.10 290 451 4.6E-55 T 12-10-2018 BAMF_0347 700ca8578b61e90071497ce3123bcd77 454 SUPERFAMILY SSF55021 296 360 3.28E-7 T 12-10-2018 BAMF_0347 700ca8578b61e90071497ce3123bcd77 454 PIRSF PIRSF000726 1 451 3.4E-74 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_0347 700ca8578b61e90071497ce3123bcd77 454 Pfam PF00696 Amino acid kinase family 2 276 3.7E-39 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BAMF_0347 700ca8578b61e90071497ce3123bcd77 454 Pfam PF13840 ACT domain 381 444 6.8E-7 T 12-10-2018 IPR027795 CASTOR, ACT domain BAMF_0347 700ca8578b61e90071497ce3123bcd77 454 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 448 4.0E-76 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BAMF_0347 700ca8578b61e90071497ce3123bcd77 454 Gene3D G3DSA:3.40.1160.10 3 287 1.4E-73 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BAMF_0955 fe795443dee2c3ef713c9e03bb5c6524 466 Pfam PF06605 Prophage endopeptidase tail 32 333 2.6E-44 T 12-10-2018 IPR010572 Prophage tail endopeptidase BAMF_0955 fe795443dee2c3ef713c9e03bb5c6524 466 Gene3D G3DSA:3.55.50.40 91 175 6.8E-6 T 12-10-2018 BAMF_0955 fe795443dee2c3ef713c9e03bb5c6524 466 Gene3D G3DSA:2.40.10.280 2 85 5.3E-9 T 12-10-2018 BAMF_0955 fe795443dee2c3ef713c9e03bb5c6524 466 TIGRFAM TIGR01665 put_anti_recept: phage minor structural protein, N-terminal region 160 310 1.6E-8 T 12-10-2018 IPR007119 Phage minor structural protein, N-terminal domain BAMF_3827 3217dfc8df9ad457ee8871c8fd54bb25 280 SUPERFAMILY SSF56176 1 169 2.29E-32 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BAMF_3827 3217dfc8df9ad457ee8871c8fd54bb25 280 SUPERFAMILY SSF55447 178 277 2.75E-11 T 12-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily BAMF_3827 3217dfc8df9ad457ee8871c8fd54bb25 280 Gene3D G3DSA:3.30.465.10 4 172 2.8E-28 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BAMF_3827 3217dfc8df9ad457ee8871c8fd54bb25 280 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 169 2.2E-23 T 12-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 BAMF_3827 3217dfc8df9ad457ee8871c8fd54bb25 280 SMART SM01092 179 274 0.0015 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal BAMF_2905 d01acd155f4836ccc7bd03d2d111b767 567 Pfam PF03354 Phage Terminase 75 550 2.6E-84 T 12-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type BAMF_2905 d01acd155f4836ccc7bd03d2d111b767 567 Gene3D G3DSA:3.40.50.300 28 252 1.6E-14 T 12-10-2018 BAMF_3333 467e3b7b229ef6d6504d262313497c92 252 SUPERFAMILY SSF51366 1 252 5.26E-79 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BAMF_3333 467e3b7b229ef6d6504d262313497c92 252 Gene3D G3DSA:3.20.20.70 1 252 1.4E-102 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_3333 467e3b7b229ef6d6504d262313497c92 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 252 47.467 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 BAMF_3333 467e3b7b229ef6d6504d262313497c92 252 Pfam PF00977 Histidine biosynthesis protein 5 235 8.3E-85 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 BAMF_3333 467e3b7b229ef6d6504d262313497c92 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 252 1.5E-118 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 BAMF_1780 7dcd3503514c0f424c3d6d47f38d7458 324 SUPERFAMILY SSF55048 134 197 3.66E-6 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BAMF_1780 7dcd3503514c0f424c3d6d47f38d7458 324 Gene3D G3DSA:3.40.366.10 6 309 2.8E-71 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 BAMF_1780 7dcd3503514c0f424c3d6d47f38d7458 324 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 306 5.4E-40 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain BAMF_1780 7dcd3503514c0f424c3d6d47f38d7458 324 Pfam PF00698 Acyl transferase domain 6 308 1.4E-38 T 12-10-2018 IPR014043 Acyl transferase BAMF_1780 7dcd3503514c0f424c3d6d47f38d7458 324 SUPERFAMILY SSF52151 5 292 6.8E-52 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BAMF_0496 9e8206c347d0eb2b26a44a1d0894d576 175 Gene3D G3DSA:3.40.630.30 1 168 1.8E-55 T 12-10-2018 BAMF_0496 9e8206c347d0eb2b26a44a1d0894d576 175 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 1.9E-32 T 12-10-2018 IPR000182 GNAT domain BAMF_0496 9e8206c347d0eb2b26a44a1d0894d576 175 SUPERFAMILY SSF55729 2 165 8.41E-49 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_3184 61a95f76ac864edb570baad135e9e0df 311 Pfam PF00005 ABC transporter 20 162 6.8E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3184 61a95f76ac864edb570baad135e9e0df 311 SMART SM00382 28 217 1.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3184 61a95f76ac864edb570baad135e9e0df 311 Gene3D G3DSA:3.40.50.300 1 237 1.6E-69 T 12-10-2018 BAMF_3184 61a95f76ac864edb570baad135e9e0df 311 SUPERFAMILY SSF52540 3 222 2.07E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3184 61a95f76ac864edb570baad135e9e0df 311 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0133 cdb8538ffa2daf05b2e9f11d8393a3dc 168 SUPERFAMILY SSF54211 82 161 7.33E-26 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_0133 cdb8538ffa2daf05b2e9f11d8393a3dc 168 Gene3D G3DSA:3.30.230.10 76 168 3.0E-37 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BAMF_0133 cdb8538ffa2daf05b2e9f11d8393a3dc 168 Pfam PF03719 Ribosomal protein S5, C-terminal domain 89 159 2.0E-30 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 BAMF_0133 cdb8538ffa2daf05b2e9f11d8393a3dc 168 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 11 165 1.4E-73 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BAMF_0133 cdb8538ffa2daf05b2e9f11d8393a3dc 168 SUPERFAMILY SSF54768 11 78 5.76E-25 T 12-10-2018 BAMF_0133 cdb8538ffa2daf05b2e9f11d8393a3dc 168 Pfam PF00333 Ribosomal protein S5, N-terminal domain 13 77 2.1E-32 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 BAMF_0133 cdb8538ffa2daf05b2e9f11d8393a3dc 168 Gene3D G3DSA:3.30.160.20 3 75 2.8E-35 T 12-10-2018 BAMF_0133 cdb8538ffa2daf05b2e9f11d8393a3dc 168 ProSitePatterns PS00585 Ribosomal protein S5 signature. 30 62 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site BAMF_0133 cdb8538ffa2daf05b2e9f11d8393a3dc 168 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 3 165 37.395 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BAMF_1101 61c9793039fce9d030ca83beb2193076 395 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 382 1.8E-115 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BAMF_1101 61c9793039fce9d030ca83beb2193076 395 SUPERFAMILY SSF53187 9 393 5.97E-84 T 12-10-2018 BAMF_1101 61c9793039fce9d030ca83beb2193076 395 Pfam PF07687 Peptidase dimerisation domain 192 284 1.4E-7 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain BAMF_1101 61c9793039fce9d030ca83beb2193076 395 SUPERFAMILY SSF55031 188 306 9.03E-29 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BAMF_1101 61c9793039fce9d030ca83beb2193076 395 Gene3D G3DSA:3.40.630.10 21 379 8.4E-144 T 12-10-2018 BAMF_1101 61c9793039fce9d030ca83beb2193076 395 PIRSF PIRSF005962 5 395 5.4E-132 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BAMF_1101 61c9793039fce9d030ca83beb2193076 395 Gene3D G3DSA:3.30.70.360 188 302 8.4E-144 T 12-10-2018 BAMF_1101 61c9793039fce9d030ca83beb2193076 395 Pfam PF01546 Peptidase family M20/M25/M40 79 388 2.1E-31 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BAMF_1296 95f4854e876a7724b3f7749af7120252 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 1.0E-21 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_1296 95f4854e876a7724b3f7749af7120252 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 434 446 1.0E-21 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_1296 95f4854e876a7724b3f7749af7120252 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 369 377 1.0E-21 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_1296 95f4854e876a7724b3f7749af7120252 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 1.0E-21 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_1296 95f4854e876a7724b3f7749af7120252 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 1.0E-21 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_1296 95f4854e876a7724b3f7749af7120252 466 SUPERFAMILY SSF51445 2 463 1.01E-156 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_1296 95f4854e876a7724b3f7749af7120252 466 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 369 377 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site BAMF_1296 95f4854e876a7724b3f7749af7120252 466 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BAMF_1296 95f4854e876a7724b3f7749af7120252 466 Pfam PF00232 Glycosyl hydrolase family 1 4 463 6.8E-155 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_1296 95f4854e876a7724b3f7749af7120252 466 Gene3D G3DSA:3.20.20.80 2 466 1.6E-158 T 12-10-2018 BAMF_1296 95f4854e876a7724b3f7749af7120252 466 TIGRFAM TIGR01233 lacG: 6-phospho-beta-galactosidase 3 465 4.9E-216 T 12-10-2018 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85 BAMF_3075 bfc6157e7cfe36d8f554aa5d81424a45 572 PRINTS PR01002 Flagellar protein FlgJ signature 111 130 9.4E-9 T 12-10-2018 BAMF_3075 bfc6157e7cfe36d8f554aa5d81424a45 572 PRINTS PR01002 Flagellar protein FlgJ signature 25 43 9.4E-9 T 12-10-2018 BAMF_3075 bfc6157e7cfe36d8f554aa5d81424a45 572 PRINTS PR01002 Flagellar protein FlgJ signature 131 149 9.4E-9 T 12-10-2018 BAMF_3075 bfc6157e7cfe36d8f554aa5d81424a45 572 Gene3D G3DSA:3.55.50.40 289 377 4.3E-12 T 12-10-2018 BAMF_3075 bfc6157e7cfe36d8f554aa5d81424a45 572 SMART SM00047 2 154 8.4E-52 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BAMF_3075 bfc6157e7cfe36d8f554aa5d81424a45 572 Gene3D G3DSA:1.10.530.10 6 154 3.9E-50 T 12-10-2018 BAMF_3075 bfc6157e7cfe36d8f554aa5d81424a45 572 Gene3D G3DSA:4.10.80.30 57 83 3.9E-50 T 12-10-2018 BAMF_3075 bfc6157e7cfe36d8f554aa5d81424a45 572 Pfam PF06605 Prophage endopeptidase tail 228 551 9.1E-66 T 12-10-2018 IPR010572 Prophage tail endopeptidase BAMF_3075 bfc6157e7cfe36d8f554aa5d81424a45 572 TIGRFAM TIGR01665 put_anti_recept: phage minor structural protein, N-terminal region 254 531 1.1E-8 T 12-10-2018 IPR007119 Phage minor structural protein, N-terminal domain BAMF_3075 bfc6157e7cfe36d8f554aa5d81424a45 572 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 14 149 5.6E-23 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BAMF_2173 a3e1f8a65714f47f9c18d31bd981136f 256 Pfam PF01739 CheR methyltransferase, SAM binding domain 67 249 3.1E-64 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BAMF_2173 a3e1f8a65714f47f9c18d31bd981136f 256 Pfam PF03705 CheR methyltransferase, all-alpha domain 4 54 2.5E-11 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BAMF_2173 a3e1f8a65714f47f9c18d31bd981136f 256 SUPERFAMILY SSF47757 3 66 1.44E-10 T 12-10-2018 BAMF_2173 a3e1f8a65714f47f9c18d31bd981136f 256 SMART SM00138 1 254 3.3E-118 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BAMF_2173 a3e1f8a65714f47f9c18d31bd981136f 256 Gene3D G3DSA:3.40.50.150 66 256 5.0E-69 T 12-10-2018 BAMF_2173 a3e1f8a65714f47f9c18d31bd981136f 256 PRINTS PR00996 Glutamate methyltransferase family signature 195 209 7.2E-41 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BAMF_2173 a3e1f8a65714f47f9c18d31bd981136f 256 PRINTS PR00996 Glutamate methyltransferase family signature 96 116 7.2E-41 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BAMF_2173 a3e1f8a65714f47f9c18d31bd981136f 256 PRINTS PR00996 Glutamate methyltransferase family signature 128 144 7.2E-41 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BAMF_2173 a3e1f8a65714f47f9c18d31bd981136f 256 PRINTS PR00996 Glutamate methyltransferase family signature 60 72 7.2E-41 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BAMF_2173 a3e1f8a65714f47f9c18d31bd981136f 256 PRINTS PR00996 Glutamate methyltransferase family signature 214 237 7.2E-41 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BAMF_2173 a3e1f8a65714f47f9c18d31bd981136f 256 PRINTS PR00996 Glutamate methyltransferase family signature 23 36 7.2E-41 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BAMF_2173 a3e1f8a65714f47f9c18d31bd981136f 256 SUPERFAMILY SSF53335 67 239 8.88E-49 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_2184 178775271b4f47b64c602d7da6493db9 345 Gene3D G3DSA:3.40.50.720 1 184 9.0E-67 T 12-10-2018 BAMF_2184 178775271b4f47b64c602d7da6493db9 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 189 210 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BAMF_2184 178775271b4f47b64c602d7da6493db9 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 161 4.2E-55 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BAMF_2184 178775271b4f47b64c602d7da6493db9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 174 198 1.6E-47 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BAMF_2184 178775271b4f47b64c602d7da6493db9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 1.6E-47 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BAMF_2184 178775271b4f47b64c602d7da6493db9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 1.6E-47 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BAMF_2184 178775271b4f47b64c602d7da6493db9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 1.6E-47 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BAMF_2184 178775271b4f47b64c602d7da6493db9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 199 223 1.6E-47 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BAMF_2184 178775271b4f47b64c602d7da6493db9 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 1.6E-47 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BAMF_2184 178775271b4f47b64c602d7da6493db9 345 PIRSF PIRSF000114 1 333 5.1E-115 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BAMF_2184 178775271b4f47b64c602d7da6493db9 345 Gene3D G3DSA:1.10.1040.10 185 328 2.1E-54 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BAMF_2184 178775271b4f47b64c602d7da6493db9 345 SUPERFAMILY SSF48179 181 332 2.21E-58 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_2184 178775271b4f47b64c602d7da6493db9 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 323 39.778 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BAMF_2184 178775271b4f47b64c602d7da6493db9 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 181 321 4.4E-56 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BAMF_2184 178775271b4f47b64c602d7da6493db9 345 SUPERFAMILY SSF51735 3 179 1.0E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0797 ec0de4f2f1b5c7f8a06209a2d18483b3 183 Pfam PF03551 Transcriptional regulator PadR-like family 8 80 3.1E-16 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal BAMF_0797 ec0de4f2f1b5c7f8a06209a2d18483b3 183 Gene3D G3DSA:1.10.10.10 3 88 1.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0797 ec0de4f2f1b5c7f8a06209a2d18483b3 183 SUPERFAMILY SSF46785 4 181 6.62E-38 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0797 ec0de4f2f1b5c7f8a06209a2d18483b3 183 Pfam PF10400 Virulence activator alpha C-term 94 180 1.5E-17 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal BAMF_1609 96b072eeb7729afa64f8e1a9dbdff874 230 PIRSF PIRSF004848 1 226 1.2E-68 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BAMF_1609 96b072eeb7729afa64f8e1a9dbdff874 230 Gene3D G3DSA:3.20.20.10 1 226 1.2E-77 T 12-10-2018 IPR029066 PLP-binding barrel BAMF_1609 96b072eeb7729afa64f8e1a9dbdff874 230 Pfam PF01168 Alanine racemase, N-terminal domain 8 222 3.2E-20 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BAMF_1609 96b072eeb7729afa64f8e1a9dbdff874 230 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 223 29.615 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BAMF_1609 96b072eeb7729afa64f8e1a9dbdff874 230 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 6 223 9.8E-52 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BAMF_1609 96b072eeb7729afa64f8e1a9dbdff874 230 SUPERFAMILY SSF51419 3 222 6.15E-73 T 12-10-2018 IPR029066 PLP-binding barrel BAMF_1609 96b072eeb7729afa64f8e1a9dbdff874 230 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 74 88 - T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BAMF_1710 57794e103f0919453cdf171583bd7559 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 213 231 2.5E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BAMF_1710 57794e103f0919453cdf171583bd7559 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 233 250 2.5E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BAMF_1710 57794e103f0919453cdf171583bd7559 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 307 328 2.5E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BAMF_1710 57794e103f0919453cdf171583bd7559 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 277 292 2.5E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BAMF_1710 57794e103f0919453cdf171583bd7559 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 15 37 2.5E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BAMF_1710 57794e103f0919453cdf171583bd7559 359 Gene3D G3DSA:3.40.1690.10 223 359 2.9E-57 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BAMF_1710 57794e103f0919453cdf171583bd7559 359 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 13 358 3.7E-136 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 BAMF_1710 57794e103f0919453cdf171583bd7559 359 SUPERFAMILY SSF160544 249 356 1.22E-42 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BAMF_1710 57794e103f0919453cdf171583bd7559 359 Pfam PF01312 FlhB HrpN YscU SpaS Family 12 352 3.8E-133 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BAMF_2073 e1542674a363f36772e6dd2bea761063 141 SMART SM00347 27 127 1.3E-31 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_2073 e1542674a363f36772e6dd2bea761063 141 Gene3D G3DSA:1.10.10.10 2 140 1.8E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2073 e1542674a363f36772e6dd2bea761063 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 2.1E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_2073 e1542674a363f36772e6dd2bea761063 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 2.1E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_2073 e1542674a363f36772e6dd2bea761063 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 2.1E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_2073 e1542674a363f36772e6dd2bea761063 141 Pfam PF01047 MarR family 34 91 2.4E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_2073 e1542674a363f36772e6dd2bea761063 141 SUPERFAMILY SSF46785 10 137 9.39E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0454 b30e1c31bc53dac64d60b1978a0ed23f 149 Hamap MF_00745 Protein SprT-like. 4 148 39.96 T 12-10-2018 IPR023524 Uncharacterised protein family SprT-like BAMF_0454 b30e1c31bc53dac64d60b1978a0ed23f 149 Pfam PF10263 SprT-like family 8 97 2.4E-12 T 12-10-2018 IPR006640 SprT-like BAMF_0454 b30e1c31bc53dac64d60b1978a0ed23f 149 SMART SM00731 4 148 1.5E-59 T 12-10-2018 IPR006640 SprT-like BAMF_0454 b30e1c31bc53dac64d60b1978a0ed23f 149 Pfam PF17283 SprT-like zinc ribbon domain 112 146 5.4E-7 T 12-10-2018 IPR035240 SprT-like, zinc ribbon domain BAMF_0921 f1d6f4a05b957e2ba50b18b22f5c8e1c 406 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 106 122 5.8E-14 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BAMF_0921 f1d6f4a05b957e2ba50b18b22f5c8e1c 406 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 206 220 5.8E-14 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BAMF_0921 f1d6f4a05b957e2ba50b18b22f5c8e1c 406 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 252 265 5.8E-14 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BAMF_0921 f1d6f4a05b957e2ba50b18b22f5c8e1c 406 Gene3D G3DSA:3.40.50.150 108 393 2.2E-86 T 12-10-2018 BAMF_0921 f1d6f4a05b957e2ba50b18b22f5c8e1c 406 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 107 307 2.9E-62 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BAMF_0921 f1d6f4a05b957e2ba50b18b22f5c8e1c 406 Pfam PF00145 C-5 cytosine-specific DNA methylase 105 315 3.0E-65 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BAMF_0921 f1d6f4a05b957e2ba50b18b22f5c8e1c 406 Pfam PF00145 C-5 cytosine-specific DNA methylase 328 394 2.7E-9 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BAMF_0921 f1d6f4a05b957e2ba50b18b22f5c8e1c 406 SUPERFAMILY SSF53335 105 399 3.95E-91 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_0921 f1d6f4a05b957e2ba50b18b22f5c8e1c 406 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 167 179 - T 12-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 BAMF_0921 f1d6f4a05b957e2ba50b18b22f5c8e1c 406 Gene3D G3DSA:3.90.120.10 247 387 2.2E-86 T 12-10-2018 BAMF_3347 f101cab8bda38069755f9ba20d742d58 243 SMART SM00345 15 74 2.4E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3347 f101cab8bda38069755f9ba20d742d58 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 6.3E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3347 f101cab8bda38069755f9ba20d742d58 243 Gene3D G3DSA:1.10.10.10 9 77 2.3E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3347 f101cab8bda38069755f9ba20d742d58 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.3E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3347 f101cab8bda38069755f9ba20d742d58 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.3E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3347 f101cab8bda38069755f9ba20d742d58 243 SUPERFAMILY SSF46785 4 84 6.48E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3347 f101cab8bda38069755f9ba20d742d58 243 Pfam PF07702 UTRA domain 95 233 3.8E-39 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BAMF_3347 f101cab8bda38069755f9ba20d742d58 243 SUPERFAMILY SSF64288 62 240 1.51E-53 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BAMF_3347 f101cab8bda38069755f9ba20d742d58 243 Gene3D G3DSA:3.40.1410.10 78 242 7.4E-53 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BAMF_3347 f101cab8bda38069755f9ba20d742d58 243 SMART SM00866 95 234 4.3E-42 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BAMF_0191 144a94e8d9c63b07d567e0bc2ca903b0 489 Pfam PF00324 Amino acid permease 42 466 4.1E-105 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BAMF_0191 144a94e8d9c63b07d567e0bc2ca903b0 489 Gene3D G3DSA:1.20.1740.10 32 485 5.1E-59 T 12-10-2018 BAMF_0191 144a94e8d9c63b07d567e0bc2ca903b0 489 PIRSF PIRSF006060 26 488 3.2E-68 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_0191 144a94e8d9c63b07d567e0bc2ca903b0 489 ProSitePatterns PS00218 Amino acid permeases signature. 67 97 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BAMF_0923 e79216e56d1d696789ec3750d79aefab 129 SUPERFAMILY SSF88659 61 109 5.98E-10 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_0923 e79216e56d1d696789ec3750d79aefab 129 Gene3D G3DSA:1.10.10.10 44 111 5.6E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0923 e79216e56d1d696789ec3750d79aefab 129 Pfam PF04545 Sigma-70, region 4 61 107 8.1E-10 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BAMF_0005 f3254081f046bda83da09e619868b07c 81 Pfam PF04025 Domain of unknown function (DUF370) 3 72 2.0E-8 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.5E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 3.5E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 312 337 3.5E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 3.5E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.5E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 3.5E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 3.5E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 3.5E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 3.5E-98 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 Gene3D G3DSA:3.40.50.1260 1 170 3.3E-76 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 Pfam PF00162 Phosphoglycerate kinase 6 383 7.3E-165 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 SUPERFAMILY SSF53748 1 393 9.19E-165 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 Gene3D G3DSA:3.40.50.1260 182 393 2.3E-88 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 393 43.297 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 12-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3255 d5e910293d7b618ecf2a79de56d2cdf1 394 PIRSF PIRSF000724 1 394 1.9E-160 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BAMF_3747 0f91b98b20eff9d399691b93c69c4a92 148 PIRSF PIRSF006276 1 148 1.0E-17 T 12-10-2018 IPR006015 Universal stress protein A BAMF_3747 0f91b98b20eff9d399691b93c69c4a92 148 PRINTS PR01438 Universal stress protein signature 108 120 2.5E-21 T 12-10-2018 IPR006015 Universal stress protein A BAMF_3747 0f91b98b20eff9d399691b93c69c4a92 148 PRINTS PR01438 Universal stress protein signature 126 148 2.5E-21 T 12-10-2018 IPR006015 Universal stress protein A BAMF_3747 0f91b98b20eff9d399691b93c69c4a92 148 PRINTS PR01438 Universal stress protein signature 2 20 2.5E-21 T 12-10-2018 IPR006015 Universal stress protein A BAMF_3747 0f91b98b20eff9d399691b93c69c4a92 148 Gene3D G3DSA:3.40.50.620 1 148 9.6E-43 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_3747 0f91b98b20eff9d399691b93c69c4a92 148 Pfam PF00582 Universal stress protein family 1 148 4.7E-33 T 12-10-2018 IPR006016 UspA BAMF_3747 0f91b98b20eff9d399691b93c69c4a92 148 SUPERFAMILY SSF52402 2 148 2.51E-39 T 12-10-2018 BAMF_1646 cb981634a204fbbc775fa8eeae1cc2c5 447 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 256 266 3.4E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BAMF_1646 cb981634a204fbbc775fa8eeae1cc2c5 447 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 428 445 3.4E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BAMF_1646 cb981634a204fbbc775fa8eeae1cc2c5 447 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 227 241 3.4E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BAMF_1646 cb981634a204fbbc775fa8eeae1cc2c5 447 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 374 390 3.4E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BAMF_1646 cb981634a204fbbc775fa8eeae1cc2c5 447 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 324 336 3.4E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BAMF_1646 cb981634a204fbbc775fa8eeae1cc2c5 447 Gene3D G3DSA:3.40.50.150 145 445 4.3E-86 T 12-10-2018 BAMF_1646 cb981634a204fbbc775fa8eeae1cc2c5 447 SUPERFAMILY SSF53335 138 446 5.32E-78 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_1646 cb981634a204fbbc775fa8eeae1cc2c5 447 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 7 447 1.1E-190 T 12-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 BAMF_1646 cb981634a204fbbc775fa8eeae1cc2c5 447 Pfam PF01189 16S rRNA methyltransferase RsmB/F 245 443 1.1E-58 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 BAMF_1646 cb981634a204fbbc775fa8eeae1cc2c5 447 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 323 334 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 BAMF_1646 cb981634a204fbbc775fa8eeae1cc2c5 447 SUPERFAMILY SSF48013 5 154 2.49E-37 T 12-10-2018 IPR035926 NusB-like superfamily BAMF_1646 cb981634a204fbbc775fa8eeae1cc2c5 447 Gene3D G3DSA:1.10.940.10 1 141 8.8E-42 T 12-10-2018 IPR035926 NusB-like superfamily BAMF_1646 cb981634a204fbbc775fa8eeae1cc2c5 447 Pfam PF01029 NusB family 5 128 2.1E-32 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BAMF_2832 7deff4443e971f275e1218a6cd1c4c77 193 Pfam PF06962 Putative rRNA methylase 48 187 1.8E-49 T 12-10-2018 IPR010719 Putative rRNA methylase BAMF_2832 7deff4443e971f275e1218a6cd1c4c77 193 Gene3D G3DSA:3.40.50.150 1 191 9.9E-73 T 12-10-2018 BAMF_2832 7deff4443e971f275e1218a6cd1c4c77 193 SUPERFAMILY SSF53335 16 156 3.38E-22 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_3698 ab8b6bcba78faa9e9c75b0b96f43ce27 432 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 6 429 2.4E-219 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_3698 ab8b6bcba78faa9e9c75b0b96f43ce27 432 Pfam PF02040 Arsenical pump membrane protein 7 428 2.0E-233 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_3698 ab8b6bcba78faa9e9c75b0b96f43ce27 432 PRINTS PR00758 Arsenical pump membrane protein signature 400 424 7.6E-114 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_3698 ab8b6bcba78faa9e9c75b0b96f43ce27 432 PRINTS PR00758 Arsenical pump membrane protein signature 220 245 7.6E-114 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_3698 ab8b6bcba78faa9e9c75b0b96f43ce27 432 PRINTS PR00758 Arsenical pump membrane protein signature 147 171 7.6E-114 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_3698 ab8b6bcba78faa9e9c75b0b96f43ce27 432 PRINTS PR00758 Arsenical pump membrane protein signature 281 305 7.6E-114 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_3698 ab8b6bcba78faa9e9c75b0b96f43ce27 432 PRINTS PR00758 Arsenical pump membrane protein signature 180 203 7.6E-114 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_3698 ab8b6bcba78faa9e9c75b0b96f43ce27 432 PRINTS PR00758 Arsenical pump membrane protein signature 104 128 7.6E-114 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_3698 ab8b6bcba78faa9e9c75b0b96f43ce27 432 PRINTS PR00758 Arsenical pump membrane protein signature 367 392 7.6E-114 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_3698 ab8b6bcba78faa9e9c75b0b96f43ce27 432 PRINTS PR00758 Arsenical pump membrane protein signature 326 348 7.6E-114 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_0611 bf9a804c0faaffccb08adfe113614823 341 Pfam PF08271 TFIIB zinc-binding 5 37 3.3E-7 T 12-10-2018 IPR013137 Zinc finger, TFIIB-type BAMF_0611 bf9a804c0faaffccb08adfe113614823 341 Gene3D G3DSA:2.20.28.30 2 35 1.8E-5 T 12-10-2018 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 Gene3D G3DSA:2.40.50.140 2 94 1.3E-14 T 12-10-2018 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 SMART SM00316 14 84 1.4E-13 T 12-10-2018 IPR022967 RNA-binding domain, S1 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 SMART SM00316 271 342 2.9E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 SMART SM00316 100 167 8.3E-8 T 12-10-2018 IPR022967 RNA-binding domain, S1 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 SMART SM00316 186 256 1.6E-28 T 12-10-2018 IPR022967 RNA-binding domain, S1 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 SUPERFAMILY SSF50249 88 170 8.95E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 SUPERFAMILY SSF50249 10 109 2.65E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 PRINTS PR00681 Ribosomal protein S1 signature 325 343 6.2E-50 T 12-10-2018 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 PRINTS PR00681 Ribosomal protein S1 signature 81 100 6.2E-50 T 12-10-2018 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 PRINTS PR00681 Ribosomal protein S1 signature 105 121 6.2E-50 T 12-10-2018 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 PRINTS PR00681 Ribosomal protein S1 signature 286 305 6.2E-50 T 12-10-2018 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 PRINTS PR00681 Ribosomal protein S1 signature 151 171 6.2E-50 T 12-10-2018 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 PRINTS PR00681 Ribosomal protein S1 signature 208 229 6.2E-50 T 12-10-2018 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 PRINTS PR00681 Ribosomal protein S1 signature 122 139 6.2E-50 T 12-10-2018 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 PRINTS PR00681 Ribosomal protein S1 signature 16 34 6.2E-50 T 12-10-2018 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 Pfam PF00575 S1 RNA binding domain 185 256 2.3E-26 T 12-10-2018 IPR003029 S1 domain GO:0003676 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 Pfam PF00575 S1 RNA binding domain 269 342 6.0E-24 T 12-10-2018 IPR003029 S1 domain GO:0003676 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 Pfam PF00575 S1 RNA binding domain 98 167 3.5E-15 T 12-10-2018 IPR003029 S1 domain GO:0003676 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 Pfam PF00575 S1 RNA binding domain 13 83 9.3E-16 T 12-10-2018 IPR003029 S1 domain GO:0003676 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 SUPERFAMILY SSF50249 256 345 1.44E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 Gene3D G3DSA:2.40.50.140 183 265 4.7E-30 T 12-10-2018 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 Gene3D G3DSA:2.40.50.140 267 352 8.2E-29 T 12-10-2018 BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 SUPERFAMILY SSF50249 185 273 4.53E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_2189 a5e9b81773737d1c5792c4d18da4e159 382 Gene3D G3DSA:2.40.50.140 95 180 4.3E-11 T 12-10-2018 BAMF_3705 345e2687fda15eec7027bca38499735d 360 SUPERFAMILY SSF51445 27 327 2.74E-54 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_3705 345e2687fda15eec7027bca38499735d 360 Gene3D G3DSA:3.20.20.80 16 360 3.2E-133 T 12-10-2018 BAMF_3705 345e2687fda15eec7027bca38499735d 360 PIRSF PIRSF018168 1 359 1.3E-146 T 12-10-2018 IPR016714 Mannan endo-1,4-beta-mannosidase GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 BAMF_3705 345e2687fda15eec7027bca38499735d 360 PRINTS PR00739 Glycosyl hydrolase family 26 signature 218 241 3.3E-27 T 12-10-2018 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 BAMF_3705 345e2687fda15eec7027bca38499735d 360 PRINTS PR00739 Glycosyl hydrolase family 26 signature 254 266 3.3E-27 T 12-10-2018 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 BAMF_3705 345e2687fda15eec7027bca38499735d 360 PRINTS PR00739 Glycosyl hydrolase family 26 signature 116 130 3.3E-27 T 12-10-2018 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 BAMF_3705 345e2687fda15eec7027bca38499735d 360 PRINTS PR00739 Glycosyl hydrolase family 26 signature 183 200 3.3E-27 T 12-10-2018 IPR000805 Glycoside hydrolase family 26 GO:0006080|GO:0016985 KEGG: 00051+3.2.1.78|MetaCyc: PWY-7456 BAMF_3705 345e2687fda15eec7027bca38499735d 360 Pfam PF02156 Glycosyl hydrolase family 26 30 348 3.3E-111 T 12-10-2018 IPR022790 Glycosyl hydrolase family 26 domain GO:0004553 BAMF_1743 22ca5037d153e895ab14c5e4ee099d17 411 Gene3D G3DSA:3.30.830.10 1 212 2.9E-81 T 12-10-2018 BAMF_1743 22ca5037d153e895ab14c5e4ee099d17 411 Pfam PF00675 Insulinase (Peptidase family M16) 12 159 9.2E-51 T 12-10-2018 IPR011765 Peptidase M16, N-terminal BAMF_1743 22ca5037d153e895ab14c5e4ee099d17 411 Gene3D G3DSA:3.30.830.10 218 410 9.8E-55 T 12-10-2018 BAMF_1743 22ca5037d153e895ab14c5e4ee099d17 411 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 BAMF_1743 22ca5037d153e895ab14c5e4ee099d17 411 SUPERFAMILY SSF63411 3 204 5.94E-63 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BAMF_1743 22ca5037d153e895ab14c5e4ee099d17 411 SUPERFAMILY SSF63411 225 401 2.67E-45 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BAMF_1743 22ca5037d153e895ab14c5e4ee099d17 411 Pfam PF05193 Peptidase M16 inactive domain 166 338 5.8E-38 T 12-10-2018 IPR007863 Peptidase M16, C-terminal BAMF_1255 5bb448bf57e63920d13e1e0a5efa3005 53 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 27 51 3.5E-13 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BAMF_1255 5bb448bf57e63920d13e1e0a5efa3005 53 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 29 52 4.2E-11 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BAMF_2409 9ed80f104583254875fb0ef3d936849c 293 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 231 285 8.9E-22 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 BAMF_2409 9ed80f104583254875fb0ef3d936849c 293 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 19 225 2.4E-61 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BAMF_2409 9ed80f104583254875fb0ef3d936849c 293 Gene3D G3DSA:3.30.70.120 203 278 1.1E-24 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BAMF_2409 9ed80f104583254875fb0ef3d936849c 293 PIRSF PIRSF006483 1 292 4.6E-88 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BAMF_3024 39c8c8c0631c9e095d67c3dfd811205b 108 SUPERFAMILY SSF52833 1 105 6.6E-44 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_3024 39c8c8c0631c9e095d67c3dfd811205b 108 Gene3D G3DSA:3.40.30.30 1 105 6.1E-41 T 12-10-2018 IPR038218 YuzD-like superfamily BAMF_3024 39c8c8c0631c9e095d67c3dfd811205b 108 PIRSF PIRSF010603 1 106 5.8E-49 T 12-10-2018 IPR009190 Protein of unknown function DUF1462 BAMF_3024 39c8c8c0631c9e095d67c3dfd811205b 108 Pfam PF07315 Protein of unknown function (DUF1462) 9 100 3.7E-41 T 12-10-2018 IPR009190 Protein of unknown function DUF1462 BAMF_3676 3a235780fccbdde6f40c8621f2033296 444 PIRSF PIRSF006351 1 443 2.6E-153 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 BAMF_3676 3a235780fccbdde6f40c8621f2033296 444 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 435 5.9E-205 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 BAMF_3676 3a235780fccbdde6f40c8621f2033296 444 Pfam PF02378 Phosphotransferase system, EIIC 29 359 1.1E-75 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BAMF_3676 3a235780fccbdde6f40c8621f2033296 444 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 435 5.9E-205 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 BAMF_1098 193c460b742e011b576cf7542d7c5bc5 247 Gene3D G3DSA:3.40.50.300 1 245 7.7E-65 T 12-10-2018 BAMF_1098 193c460b742e011b576cf7542d7c5bc5 247 SMART SM00382 28 213 9.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1098 193c460b742e011b576cf7542d7c5bc5 247 Pfam PF00005 ABC transporter 19 162 1.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1098 193c460b742e011b576cf7542d7c5bc5 247 SUPERFAMILY SSF52540 3 231 3.66E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0504 d107de41ec90fdf871d83b38e77694c8 273 SUPERFAMILY SSF46955 9 119 8.79E-25 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BAMF_0504 d107de41ec90fdf871d83b38e77694c8 273 SUPERFAMILY SSF55136 146 270 7.32E-15 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BAMF_0504 d107de41ec90fdf871d83b38e77694c8 273 SMART SM00422 9 78 4.2E-22 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_0504 d107de41ec90fdf871d83b38e77694c8 273 Gene3D G3DSA:1.10.1660.10 7 135 7.7E-29 T 12-10-2018 BAMF_0504 d107de41ec90fdf871d83b38e77694c8 273 Pfam PF13411 MerR HTH family regulatory protein 9 76 2.9E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_1469 60e18ae85c261883d132fb3897103ca0 79 ProDom PD028055 SPLA TRANSCRIPTIONAL TRANSCRIPTION REGULATOR REGULATION 5 74 1.0E-30 T 12-10-2018 BAMF_1469 60e18ae85c261883d132fb3897103ca0 79 Pfam PF11132 Transcriptional regulator protein (SplA) 3 74 7.1E-39 T 12-10-2018 IPR022608 Transcription regulator SplA BAMF_2314 2cedabc543b94eb30bbd65f382c3f4b9 191 SUPERFAMILY SSF51735 1 177 1.1E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2314 2cedabc543b94eb30bbd65f382c3f4b9 191 Gene3D G3DSA:3.40.50.720 1 179 4.1E-62 T 12-10-2018 BAMF_2314 2cedabc543b94eb30bbd65f382c3f4b9 191 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 176 1.7E-58 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BAMF_3037 ebe1093265d6963e348b65e537668521 325 Pfam PF01551 Peptidase family M23 202 300 5.5E-21 T 12-10-2018 IPR016047 Peptidase M23 BAMF_3037 ebe1093265d6963e348b65e537668521 325 Gene3D G3DSA:2.70.70.10 158 324 3.1E-56 T 12-10-2018 IPR011055 Duplicated hybrid motif BAMF_3037 ebe1093265d6963e348b65e537668521 325 SUPERFAMILY SSF51261 128 313 5.75E-35 T 12-10-2018 IPR011055 Duplicated hybrid motif BAMF_2598 0581f3946879b180812435712193887f 428 SUPERFAMILY SSF102741 356 428 7.32E-24 T 12-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily BAMF_2598 0581f3946879b180812435712193887f 428 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 BAMF_2598 0581f3946879b180812435712193887f 428 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 328 3.3E-146 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BAMF_2598 0581f3946879b180812435712193887f 428 PIRSF PIRSF002401 1 376 1.7E-146 T 12-10-2018 IPR035101 GTP-binding protein, Obg-type BAMF_2598 0581f3946879b180812435712193887f 428 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 320 3.0E-13 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BAMF_2598 0581f3946879b180812435712193887f 428 Pfam PF09269 Domain of unknown function (DUF1967) 358 426 1.5E-24 T 12-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 BAMF_2598 0581f3946879b180812435712193887f 428 Gene3D G3DSA:2.40.240.60 357 428 1.1E-17 T 12-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily BAMF_2598 0581f3946879b180812435712193887f 428 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 358 426 5.2E-26 T 12-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 BAMF_2598 0581f3946879b180812435712193887f 428 Gene3D G3DSA:2.70.210.12 1 157 5.0E-64 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily BAMF_2598 0581f3946879b180812435712193887f 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 4.7E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_2598 0581f3946879b180812435712193887f 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 4.7E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_2598 0581f3946879b180812435712193887f 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 4.7E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_2598 0581f3946879b180812435712193887f 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 4.7E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_2598 0581f3946879b180812435712193887f 428 SUPERFAMILY SSF82051 1 157 1.83E-57 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily BAMF_2598 0581f3946879b180812435712193887f 428 Hamap MF_01454 GTPase Obg [obg]. 1 329 48.955 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BAMF_2598 0581f3946879b180812435712193887f 428 Gene3D G3DSA:3.40.50.300 158 341 4.0E-63 T 12-10-2018 BAMF_2598 0581f3946879b180812435712193887f 428 Pfam PF01926 50S ribosome-binding GTPase 160 283 1.1E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_2598 0581f3946879b180812435712193887f 428 SUPERFAMILY SSF52540 151 330 6.95E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2598 0581f3946879b180812435712193887f 428 Pfam PF01018 GTP1/OBG 3 157 4.3E-62 T 12-10-2018 IPR006169 GTP1/OBG domain BAMF_1512 8f580921ea279d4a83f05105d8772576 251 SUPERFAMILY SSF100950 75 230 6.59E-32 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BAMF_1512 8f580921ea279d4a83f05105d8772576 251 SMART SM00420 6 58 1.0E-19 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_1512 8f580921ea279d4a83f05105d8772576 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 2.1E-14 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_1512 8f580921ea279d4a83f05105d8772576 251 SMART SM01134 73 233 1.5E-63 T 12-10-2018 BAMF_1512 8f580921ea279d4a83f05105d8772576 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BAMF_1512 8f580921ea279d4a83f05105d8772576 251 SUPERFAMILY SSF46785 5 67 3.91E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1512 8f580921ea279d4a83f05105d8772576 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.1E-8 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_1512 8f580921ea279d4a83f05105d8772576 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.1E-8 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_1512 8f580921ea279d4a83f05105d8772576 251 Pfam PF00455 DeoR C terminal sensor domain 75 231 1.0E-47 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain BAMF_0081 a8770ee823297901873bfc10be38dc6f 499 SUPERFAMILY SSF50249 10 151 4.65E-46 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_0081 a8770ee823297901873bfc10be38dc6f 499 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 10 498 2.8E-234 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BAMF_0081 a8770ee823297901873bfc10be38dc6f 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 211 227 4.0E-40 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BAMF_0081 a8770ee823297901873bfc10be38dc6f 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 240 253 4.0E-40 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BAMF_0081 a8770ee823297901873bfc10be38dc6f 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 258 275 4.0E-40 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BAMF_0081 a8770ee823297901873bfc10be38dc6f 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 195 205 4.0E-40 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BAMF_0081 a8770ee823297901873bfc10be38dc6f 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 381 397 4.0E-40 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BAMF_0081 a8770ee823297901873bfc10be38dc6f 499 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 17 499 46.645 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BAMF_0081 a8770ee823297901873bfc10be38dc6f 499 SUPERFAMILY SSF55681 158 497 1.7E-125 T 12-10-2018 BAMF_0081 a8770ee823297901873bfc10be38dc6f 499 Gene3D G3DSA:3.30.930.10 152 496 3.3E-141 T 12-10-2018 BAMF_0081 a8770ee823297901873bfc10be38dc6f 499 Pfam PF01336 OB-fold nucleic acid binding domain 65 142 8.3E-16 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BAMF_0081 a8770ee823297901873bfc10be38dc6f 499 Gene3D G3DSA:2.40.50.140 11 151 1.1E-47 T 12-10-2018 BAMF_0081 a8770ee823297901873bfc10be38dc6f 499 PIRSF PIRSF039101 1 499 2.7E-205 T 12-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BAMF_0081 a8770ee823297901873bfc10be38dc6f 499 Pfam PF00152 tRNA synthetases class II (D, K and N) 159 496 1.3E-84 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_1191 eedcbc88a825dd567ebb2c43d8a5a2b6 180 Pfam PF07690 Major Facilitator Superfamily 10 174 1.9E-17 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_1191 eedcbc88a825dd567ebb2c43d8a5a2b6 180 Gene3D G3DSA:1.20.1250.20 2 178 1.5E-22 T 12-10-2018 BAMF_1191 eedcbc88a825dd567ebb2c43d8a5a2b6 180 SUPERFAMILY SSF103473 6 176 9.68E-24 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0640 cca012cb119d1b52370332be5ab2b94c 84 SUPERFAMILY SSF82697 1 80 6.1E-31 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BAMF_0640 cca012cb119d1b52370332be5ab2b94c 84 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 78 5.7E-34 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BAMF_0640 cca012cb119d1b52370332be5ab2b94c 84 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 80 9.4E-39 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BAMF_0640 cca012cb119d1b52370332be5ab2b94c 84 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 78 22.426 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BAMF_0640 cca012cb119d1b52370332be5ab2b94c 84 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 80 5.0E-34 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BAMF_0640 cca012cb119d1b52370332be5ab2b94c 84 Gene3D G3DSA:3.30.1280.10 1 84 2.0E-39 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BAMF_1066 26028dac46dcbab9ab4fabb025014e70 206 Gene3D G3DSA:3.40.50.720 1 205 2.9E-37 T 12-10-2018 BAMF_1066 26028dac46dcbab9ab4fabb025014e70 206 SUPERFAMILY SSF51735 1 204 1.08E-29 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1066 26028dac46dcbab9ab4fabb025014e70 206 Pfam PF13460 NAD(P)H-binding 7 195 4.2E-31 T 12-10-2018 IPR016040 NAD(P)-binding domain BAMF_0913 749867bf9b919dda750607b0bbfa0988 243 Pfam PF07460 NUMOD3 motif (2 copies) 99 121 9.8E-6 T 12-10-2018 IPR003611 Nuclease associated modular domain 3 GO:0003677 BAMF_0913 749867bf9b919dda750607b0bbfa0988 243 Pfam PF07460 NUMOD3 motif (2 copies) 151 171 1.4E-6 T 12-10-2018 IPR003611 Nuclease associated modular domain 3 GO:0003677 BAMF_0913 749867bf9b919dda750607b0bbfa0988 243 Pfam PF07460 NUMOD3 motif (2 copies) 112 134 8.3E-5 T 12-10-2018 IPR003611 Nuclease associated modular domain 3 GO:0003677 BAMF_0913 749867bf9b919dda750607b0bbfa0988 243 TIGRFAM TIGR01453 grpIintron_endo: group I intron endonuclease 3 229 1.8E-39 T 12-10-2018 IPR006350 Intron endonuclease, group I GO:0004519 BAMF_0913 749867bf9b919dda750607b0bbfa0988 243 SUPERFAMILY SSF64496 137 227 4.18E-17 T 12-10-2018 BAMF_0913 749867bf9b919dda750607b0bbfa0988 243 SUPERFAMILY SSF82771 3 93 5.62E-15 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BAMF_0913 749867bf9b919dda750607b0bbfa0988 243 SMART SM00496 150 166 0.065 T 12-10-2018 IPR003611 Nuclease associated modular domain 3 GO:0003677 BAMF_0913 749867bf9b919dda750607b0bbfa0988 243 SMART SM00496 108 124 3.6 T 12-10-2018 IPR003611 Nuclease associated modular domain 3 GO:0003677 BAMF_0913 749867bf9b919dda750607b0bbfa0988 243 SUPERFAMILY SSF64496 99 132 1.02E-7 T 12-10-2018 BAMF_0913 749867bf9b919dda750607b0bbfa0988 243 Pfam PF01541 GIY-YIG catalytic domain 3 85 2.7E-10 T 12-10-2018 IPR000305 GIY-YIG endonuclease BAMF_0913 749867bf9b919dda750607b0bbfa0988 243 SMART SM00465 1 95 6.5E-12 T 12-10-2018 IPR000305 GIY-YIG endonuclease BAMF_0913 749867bf9b919dda750607b0bbfa0988 243 Gene3D G3DSA:3.40.1440.10 2 97 4.9E-26 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BAMF_2057 b895d08bd74f2ea8108a81b017d7b04b 259 SUPERFAMILY SSF55729 148 254 6.45E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_2057 b895d08bd74f2ea8108a81b017d7b04b 259 Gene3D G3DSA:3.40.630.30 7 249 1.2E-25 T 12-10-2018 BAMF_2057 b895d08bd74f2ea8108a81b017d7b04b 259 Pfam PF00583 Acetyltransferase (GNAT) family 155 244 1.2E-12 T 12-10-2018 IPR000182 GNAT domain BAMF_3503 93cfb6b14134edcc77433d3f18d22ba4 134 SUPERFAMILY SSF46785 5 129 3.42E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3503 93cfb6b14134edcc77433d3f18d22ba4 134 Gene3D G3DSA:1.10.10.10 1 134 4.7E-58 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3503 93cfb6b14134edcc77433d3f18d22ba4 134 Pfam PF02082 Transcriptional regulator 1 78 9.1E-19 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type BAMF_1670 1ea10992e738bc8e7a9e56d497a6c1fe 90 Pfam PF00886 Ribosomal protein S16 9 67 3.1E-26 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1670 1ea10992e738bc8e7a9e56d497a6c1fe 90 Gene3D G3DSA:3.30.1320.10 1 90 1.6E-37 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1670 1ea10992e738bc8e7a9e56d497a6c1fe 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 24.861 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1670 1ea10992e738bc8e7a9e56d497a6c1fe 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 1.6E-35 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1670 1ea10992e738bc8e7a9e56d497a6c1fe 90 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 12-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_1670 1ea10992e738bc8e7a9e56d497a6c1fe 90 SUPERFAMILY SSF54565 2 86 1.31E-34 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0429 4b37c79eec13953cdcae09fdad0414bd 48 Pfam PF13040 Fur-regulated basic protein B 3 40 3.1E-17 T 12-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS BAMF_0615 3cf3579f8e05ce2d25c533c42b450c78 286 Pfam PF11738 Protein of unknown function (DUF3298) 190 273 2.1E-19 T 12-10-2018 IPR021729 Domain of unknown function DUF3298 BAMF_0615 3cf3579f8e05ce2d25c533c42b450c78 286 Gene3D G3DSA:3.30.565.40 76 186 6.2E-28 T 12-10-2018 BAMF_0615 3cf3579f8e05ce2d25c533c42b450c78 286 Pfam PF13739 Domain of unknown function (DUF4163) 86 160 5.6E-7 T 12-10-2018 IPR025303 Deacetylase PdaC BAMF_0615 3cf3579f8e05ce2d25c533c42b450c78 286 Gene3D G3DSA:3.90.640.20 187 286 2.1E-41 T 12-10-2018 IPR037126 PdaC/RsiV-like superfamily BAMF_1757 7bf14b56789eca64fd669ea3474aedf7 1039 Gene3D G3DSA:1.20.1640.10 149 346 3.4E-10 T 12-10-2018 BAMF_1757 7bf14b56789eca64fd669ea3474aedf7 1039 Pfam PF03176 MMPL family 42 365 1.3E-63 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 BAMF_1757 7bf14b56789eca64fd669ea3474aedf7 1039 Pfam PF03176 MMPL family 710 1034 1.6E-45 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 BAMF_1757 7bf14b56789eca64fd669ea3474aedf7 1039 SUPERFAMILY SSF82866 138 340 3.53E-34 T 12-10-2018 BAMF_1757 7bf14b56789eca64fd669ea3474aedf7 1039 Gene3D G3DSA:1.20.1640.10 829 1032 2.0E-10 T 12-10-2018 BAMF_1757 7bf14b56789eca64fd669ea3474aedf7 1039 SUPERFAMILY SSF82866 812 1034 1.07E-31 T 12-10-2018 BAMF_1757 7bf14b56789eca64fd669ea3474aedf7 1039 SUPERFAMILY SSF58104 504 743 5.23E-7 T 12-10-2018 BAMF_1757 7bf14b56789eca64fd669ea3474aedf7 1039 Gene3D G3DSA:1.10.287.950 621 764 1.4E-5 T 12-10-2018 BAMF_3765 98cc7eb1871528ba584dc75361eefc87 222 PIRSF PIRSF001357 1 219 7.9E-78 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BAMF_3765 98cc7eb1871528ba584dc75361eefc87 222 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 216 37.322 T 12-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 BAMF_3765 98cc7eb1871528ba584dc75361eefc87 222 Pfam PF01791 DeoC/LacD family aldolase 10 210 4.2E-23 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BAMF_3765 98cc7eb1871528ba584dc75361eefc87 222 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 212 1.6E-95 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BAMF_3765 98cc7eb1871528ba584dc75361eefc87 222 SMART SM01133 2 214 2.1E-104 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BAMF_3765 98cc7eb1871528ba584dc75361eefc87 222 SUPERFAMILY SSF51569 2 213 7.01E-83 T 12-10-2018 BAMF_3765 98cc7eb1871528ba584dc75361eefc87 222 Gene3D G3DSA:3.20.20.70 1 218 3.3E-97 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_3800 5d74eed1ea4da93d79d637a79ae7b884 139 ProDom PD086672 YXAJ MEMBRANE TRANSMEMBRANE 12 130 8.0E-21 T 12-10-2018 IPR020204 Uncharacterised protein family, YxaJ BAMF_3800 5d74eed1ea4da93d79d637a79ae7b884 139 Pfam PF17369 Family of unknown function (DUF5391) 3 131 1.6E-42 T 12-10-2018 IPR020204 Uncharacterised protein family, YxaJ BAMF_0207 192ca1221475ca3918e7fa9ed61f691f 482 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 7 272 5.9E-84 T 12-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal BAMF_0207 192ca1221475ca3918e7fa9ed61f691f 482 SUPERFAMILY SSF47203 264 480 7.74E-59 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BAMF_0207 192ca1221475ca3918e7fa9ed61f691f 482 Gene3D G3DSA:2.40.110.10 149 274 2.2E-38 T 12-10-2018 BAMF_0207 192ca1221475ca3918e7fa9ed61f691f 482 PIRSF PIRSF000331 2 482 4.5E-142 T 12-10-2018 IPR004925 HpaB/PvcC/4-BUDH BAMF_0207 192ca1221475ca3918e7fa9ed61f691f 482 SUPERFAMILY SSF56645 4 274 7.33E-69 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BAMF_0207 192ca1221475ca3918e7fa9ed61f691f 482 TIGRFAM TIGR02309 HpaB-1: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 6 479 4.7E-154 T 12-10-2018 IPR012687 4-HPA 3-monooxygenase large component, Deinococcus-type GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431 BAMF_0207 192ca1221475ca3918e7fa9ed61f691f 482 Gene3D G3DSA:1.20.140.10 276 482 1.4E-74 T 12-10-2018 BAMF_0207 192ca1221475ca3918e7fa9ed61f691f 482 Gene3D G3DSA:1.10.3140.10 4 147 2.4E-43 T 12-10-2018 BAMF_0207 192ca1221475ca3918e7fa9ed61f691f 482 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 284 478 2.2E-64 T 12-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal BAMF_1810 e28a9e58c03d0db9abdab2d32fed39a2 252 Gene3D G3DSA:3.30.70.1070 183 252 5.6E-27 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BAMF_1810 e28a9e58c03d0db9abdab2d32fed39a2 252 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 4 172 3.2E-44 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BAMF_1810 e28a9e58c03d0db9abdab2d32fed39a2 252 SUPERFAMILY SSF53187 1 177 1.26E-52 T 12-10-2018 BAMF_1810 e28a9e58c03d0db9abdab2d32fed39a2 252 SMART SM00646 64 172 5.3E-42 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BAMF_1810 e28a9e58c03d0db9abdab2d32fed39a2 252 SUPERFAMILY SSF110997 181 249 9.29E-17 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BAMF_1810 e28a9e58c03d0db9abdab2d32fed39a2 252 Pfam PF05036 Sporulation related domain 182 248 2.8E-16 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 BAMF_1810 e28a9e58c03d0db9abdab2d32fed39a2 252 Gene3D G3DSA:3.40.630.40 1 174 8.3E-56 T 12-10-2018 BAMF_2816 faa210e38e53c4a318654d50cd797ce9 261 Pfam PF13426 PAS domain 27 128 8.4E-20 T 12-10-2018 IPR000014 PAS domain BAMF_2816 faa210e38e53c4a318654d50cd797ce9 261 Pfam PF01740 STAS domain 151 254 3.4E-7 T 12-10-2018 IPR002645 STAS domain BAMF_2816 faa210e38e53c4a318654d50cd797ce9 261 SMART SM00091 14 84 0.0026 T 12-10-2018 IPR000014 PAS domain BAMF_2816 faa210e38e53c4a318654d50cd797ce9 261 SUPERFAMILY SSF55785 21 129 9.07E-25 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_2816 faa210e38e53c4a318654d50cd797ce9 261 Gene3D G3DSA:3.30.450.20 9 146 1.5E-47 T 12-10-2018 BAMF_2816 faa210e38e53c4a318654d50cd797ce9 261 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 134 5.6E-20 T 12-10-2018 IPR000014 PAS domain BAMF_2816 faa210e38e53c4a318654d50cd797ce9 261 SMART SM00086 89 129 2.2E-6 T 12-10-2018 IPR001610 PAC motif BAMF_2816 faa210e38e53c4a318654d50cd797ce9 261 Gene3D G3DSA:3.30.750.24 147 259 2.1E-29 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_2816 faa210e38e53c4a318654d50cd797ce9 261 SUPERFAMILY SSF52091 148 258 4.71E-13 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_2701 129c97523c6b26cb4491be29c7597c79 311 Gene3D G3DSA:3.40.50.300 108 302 4.0E-54 T 12-10-2018 BAMF_2701 129c97523c6b26cb4491be29c7597c79 311 SMART SM00382 160 284 7.8E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2701 129c97523c6b26cb4491be29c7597c79 311 Pfam PF01695 IstB-like ATP binding protein 145 274 2.8E-12 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 BAMF_2701 129c97523c6b26cb4491be29c7597c79 311 Pfam PF07319 Primosomal protein DnaI N-terminus 1 98 1.4E-29 T 12-10-2018 IPR009928 Primosomal DnaI, N-terminal BAMF_2701 129c97523c6b26cb4491be29c7597c79 311 SUPERFAMILY SSF52540 130 274 4.63E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1162 5d288644453393b73a159e9fa5d4937d 891 Gene3D G3DSA:2.60.40.10 809 886 6.7E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold BAMF_1162 5d288644453393b73a159e9fa5d4937d 891 PRINTS PR00723 Subtilisin serine protease family (S8) signature 450 469 6.7E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_1162 5d288644453393b73a159e9fa5d4937d 891 PRINTS PR00723 Subtilisin serine protease family (S8) signature 644 660 6.7E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_1162 5d288644453393b73a159e9fa5d4937d 891 PRINTS PR00723 Subtilisin serine protease family (S8) signature 490 503 6.7E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_1162 5d288644453393b73a159e9fa5d4937d 891 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 494 504 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BAMF_1162 5d288644453393b73a159e9fa5d4937d 891 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 645 655 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BAMF_1162 5d288644453393b73a159e9fa5d4937d 891 SUPERFAMILY SSF52743 450 728 5.63E-83 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BAMF_1162 5d288644453393b73a159e9fa5d4937d 891 Pfam PF00082 Subtilase family 452 686 1.8E-46 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BAMF_1162 5d288644453393b73a159e9fa5d4937d 891 Gene3D G3DSA:3.40.50.200 409 697 7.9E-84 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BAMF_0321 61c84f29002443d4f589f4efefb0e31b 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site BAMF_0321 61c84f29002443d4f589f4efefb0e31b 256 SUPERFAMILY SSF53850 4 253 7.98E-60 T 12-10-2018 BAMF_0321 61c84f29002443d4f589f4efefb0e31b 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 252 8.6E-56 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BAMF_0321 61c84f29002443d4f589f4efefb0e31b 256 Gene3D G3DSA:3.40.190.10 34 245 1.4E-68 T 12-10-2018 BAMF_0321 61c84f29002443d4f589f4efefb0e31b 256 Gene3D G3DSA:3.40.190.10 118 214 1.4E-68 T 12-10-2018 BAMF_0321 61c84f29002443d4f589f4efefb0e31b 256 SMART SM00062 35 253 6.8E-80 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BAMF_1689 96394f88f0effe5158e9438aecba2b2a 129 PIRSF PIRSF002889 2 128 2.3E-32 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BAMF_1689 96394f88f0effe5158e9438aecba2b2a 129 Pfam PF00460 Flagella basal body rod protein 8 38 3.1E-10 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BAMF_1689 96394f88f0effe5158e9438aecba2b2a 129 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BAMF_1689 96394f88f0effe5158e9438aecba2b2a 129 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 4 125 7.0E-40 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BAMF_1569 b9fde4a59768c2c46a05850f68b517eb 147 SUPERFAMILY SSF54631 2 119 5.05E-31 T 12-10-2018 BAMF_1569 b9fde4a59768c2c46a05850f68b517eb 147 SMART SM00116 11 60 2.3E-5 T 12-10-2018 IPR000644 CBS domain BAMF_1569 b9fde4a59768c2c46a05850f68b517eb 147 SMART SM00116 77 124 2.7E-8 T 12-10-2018 IPR000644 CBS domain BAMF_1569 b9fde4a59768c2c46a05850f68b517eb 147 Pfam PF00571 CBS domain 6 56 3.0E-11 T 12-10-2018 IPR000644 CBS domain BAMF_1569 b9fde4a59768c2c46a05850f68b517eb 147 Pfam PF00571 CBS domain 71 119 5.4E-13 T 12-10-2018 IPR000644 CBS domain BAMF_1569 b9fde4a59768c2c46a05850f68b517eb 147 Gene3D G3DSA:3.10.580.10 1 130 1.1E-35 T 12-10-2018 BAMF_2080 ff3b36e94a68db136021ad57907e4985 212 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 6 206 4.2E-70 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 BAMF_2080 ff3b36e94a68db136021ad57907e4985 212 Pfam PF03006 Haemolysin-III related 2 197 3.8E-39 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 BAMF_0073 18700bc576eb4b68a66ebdad3c53bba0 308 Gene3D G3DSA:3.40.50.1100 7 301 5.9E-125 T 12-10-2018 BAMF_0073 18700bc576eb4b68a66ebdad3c53bba0 308 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BAMF_0073 18700bc576eb4b68a66ebdad3c53bba0 308 SUPERFAMILY SSF53686 3 306 1.28E-105 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BAMF_0073 18700bc576eb4b68a66ebdad3c53bba0 308 Gene3D G3DSA:3.40.50.1100 46 144 5.9E-125 T 12-10-2018 BAMF_0073 18700bc576eb4b68a66ebdad3c53bba0 308 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 305 1.0E-137 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BAMF_0073 18700bc576eb4b68a66ebdad3c53bba0 308 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 305 2.4E-147 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BAMF_0073 18700bc576eb4b68a66ebdad3c53bba0 308 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 293 1.7E-71 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BAMF_1446 db5e865e32b31deeaf7661e81ddcbe31 148 ProSitePatterns PS01117 MarR-type HTH domain signature. 67 101 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BAMF_1446 db5e865e32b31deeaf7661e81ddcbe31 148 SMART SM00347 28 128 5.4E-23 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1446 db5e865e32b31deeaf7661e81ddcbe31 148 Gene3D G3DSA:1.10.10.10 1 143 2.0E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1446 db5e865e32b31deeaf7661e81ddcbe31 148 SUPERFAMILY SSF46785 3 142 1.07E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1446 db5e865e32b31deeaf7661e81ddcbe31 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 1.8E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1446 db5e865e32b31deeaf7661e81ddcbe31 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.8E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1446 db5e865e32b31deeaf7661e81ddcbe31 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.8E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1446 db5e865e32b31deeaf7661e81ddcbe31 148 Pfam PF01047 MarR family 35 92 4.8E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0402 5fd1cbdbfb5883b6f8dbf157413c21ae 80 Gene3D G3DSA:3.10.350.10 11 74 3.7E-18 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_0402 5fd1cbdbfb5883b6f8dbf157413c21ae 80 SUPERFAMILY SSF54106 17 60 2.88E-11 T 12-10-2018 BAMF_0402 5fd1cbdbfb5883b6f8dbf157413c21ae 80 SMART SM00257 17 61 8.4E-16 T 12-10-2018 IPR018392 LysM domain BAMF_0402 5fd1cbdbfb5883b6f8dbf157413c21ae 80 Pfam PF01476 LysM domain 18 60 3.2E-14 T 12-10-2018 IPR018392 LysM domain BAMF_2476 c2de45b41dcf2d75c3bd58a15b6e23c9 277 SUPERFAMILY SSF52777 26 170 1.83E-8 T 12-10-2018 BAMF_2476 c2de45b41dcf2d75c3bd58a15b6e23c9 277 SUPERFAMILY SSF52777 206 267 8.0E-5 T 12-10-2018 BAMF_2476 c2de45b41dcf2d75c3bd58a15b6e23c9 277 Gene3D G3DSA:3.30.559.10 12 192 5.2E-8 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BAMF_2476 c2de45b41dcf2d75c3bd58a15b6e23c9 277 Gene3D G3DSA:3.30.559.30 193 269 1.2E-5 T 12-10-2018 BAMF_2476 c2de45b41dcf2d75c3bd58a15b6e23c9 277 Pfam PF00668 Condensation domain 27 182 7.4E-5 T 12-10-2018 IPR001242 Condensation domain BAMF_2427 cf449c4f5657a90fc0fe5b63da8d1d93 136 Gene3D G3DSA:3.40.140.10 1 136 1.4E-60 T 12-10-2018 BAMF_2427 cf449c4f5657a90fc0fe5b63da8d1d93 136 SUPERFAMILY SSF53927 2 130 8.56E-49 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BAMF_2427 cf449c4f5657a90fc0fe5b63da8d1d93 136 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 93 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BAMF_2427 cf449c4f5657a90fc0fe5b63da8d1d93 136 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 5 129 8.3E-47 T 12-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 BAMF_2427 cf449c4f5657a90fc0fe5b63da8d1d93 136 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 103 2.9E-18 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BAMF_2676 539e22605e66fb8a78bc7ca7eb9eadcf 598 Pfam PF02554 Carbon starvation protein CstA 1 366 4.5E-146 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 BAMF_2676 539e22605e66fb8a78bc7ca7eb9eadcf 598 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 416 537 1.6E-29 T 12-10-2018 IPR025299 CstA, C-terminal domain BAMF_3876 48b89c1c368049db1db581cad19c6120 161 Pfam PF07875 Coat F domain 83 140 4.8E-19 T 12-10-2018 IPR012851 Spore coat protein CotF-like BAMF_3624 e923091384db06261c0cb5c2efde1941 389 Gene3D G3DSA:3.40.640.10 1 257 5.7E-105 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_3624 e923091384db06261c0cb5c2efde1941 389 Gene3D G3DSA:3.90.1150.10 258 387 4.7E-40 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_3624 e923091384db06261c0cb5c2efde1941 389 PIRSF PIRSF000390 5 388 2.3E-121 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BAMF_3624 e923091384db06261c0cb5c2efde1941 389 SUPERFAMILY SSF53383 8 386 1.01E-125 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_3624 e923091384db06261c0cb5c2efde1941 389 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 381 1.2E-142 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BAMF_3039 94c1d7416f3a18c8dbf97ab891d63cf7 464 PRINTS PR01607 Apyrase family signature 414 433 1.2E-17 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_3039 94c1d7416f3a18c8dbf97ab891d63cf7 464 PRINTS PR01607 Apyrase family signature 188 211 1.2E-17 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_3039 94c1d7416f3a18c8dbf97ab891d63cf7 464 PRINTS PR01607 Apyrase family signature 3 21 1.2E-17 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_3039 94c1d7416f3a18c8dbf97ab891d63cf7 464 PRINTS PR01607 Apyrase family signature 169 186 1.2E-17 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_3039 94c1d7416f3a18c8dbf97ab891d63cf7 464 PRINTS PR01607 Apyrase family signature 216 236 1.2E-17 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_3039 94c1d7416f3a18c8dbf97ab891d63cf7 464 PRINTS PR01607 Apyrase family signature 330 353 1.2E-17 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_3039 94c1d7416f3a18c8dbf97ab891d63cf7 464 Pfam PF02872 5'-nucleotidase, C-terminal domain 290 428 7.6E-14 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_3039 94c1d7416f3a18c8dbf97ab891d63cf7 464 SUPERFAMILY SSF56300 4 277 5.69E-67 T 12-10-2018 BAMF_3039 94c1d7416f3a18c8dbf97ab891d63cf7 464 Gene3D G3DSA:3.60.21.10 2 278 3.1E-55 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BAMF_3039 94c1d7416f3a18c8dbf97ab891d63cf7 464 Gene3D G3DSA:3.90.780.10 281 464 2.0E-15 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_3039 94c1d7416f3a18c8dbf97ab891d63cf7 464 SUPERFAMILY SSF55816 290 463 3.14E-26 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BAMF_3039 94c1d7416f3a18c8dbf97ab891d63cf7 464 PIRSF PIRSF036361 1 464 1.7E-183 T 12-10-2018 IPR011240 Phosphoesterase-related protein YunD BAMF_0873 cbe1a8aac9468d5ce28b6e0025579582 250 SUPERFAMILY SSF51735 3 248 2.6E-76 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0873 cbe1a8aac9468d5ce28b6e0025579582 250 Gene3D G3DSA:3.40.50.720 1 250 1.4E-77 T 12-10-2018 BAMF_0873 cbe1a8aac9468d5ce28b6e0025579582 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.9E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0873 cbe1a8aac9468d5ce28b6e0025579582 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.9E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0873 cbe1a8aac9468d5ce28b6e0025579582 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 3.9E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0873 cbe1a8aac9468d5ce28b6e0025579582 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.9E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0873 cbe1a8aac9468d5ce28b6e0025579582 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.9E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0873 cbe1a8aac9468d5ce28b6e0025579582 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.9E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0873 cbe1a8aac9468d5ce28b6e0025579582 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 245 4.9E-64 T 12-10-2018 BAMF_0873 cbe1a8aac9468d5ce28b6e0025579582 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.2E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0873 cbe1a8aac9468d5ce28b6e0025579582 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 5.2E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0873 cbe1a8aac9468d5ce28b6e0025579582 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 5.2E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2315 3048664f85f14b60f1c60a82709e9d4a 393 PIRSF PIRSF000429 2 393 5.5E-116 T 12-10-2018 IPR002155 Thiolase GO:0016747 BAMF_2315 3048664f85f14b60f1c60a82709e9d4a 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 1.3E-44 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BAMF_2315 3048664f85f14b60f1c60a82709e9d4a 393 Gene3D G3DSA:3.40.47.10 126 389 3.6E-140 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_2315 3048664f85f14b60f1c60a82709e9d4a 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.1E-139 T 12-10-2018 IPR002155 Thiolase GO:0016747 BAMF_2315 3048664f85f14b60f1c60a82709e9d4a 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 BAMF_2315 3048664f85f14b60f1c60a82709e9d4a 393 Gene3D G3DSA:3.40.47.10 5 276 3.6E-140 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_2315 3048664f85f14b60f1c60a82709e9d4a 393 SUPERFAMILY SSF53901 4 268 3.51E-79 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_2315 3048664f85f14b60f1c60a82709e9d4a 393 SUPERFAMILY SSF53901 271 392 1.03E-37 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_2315 3048664f85f14b60f1c60a82709e9d4a 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 BAMF_2315 3048664f85f14b60f1c60a82709e9d4a 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 BAMF_2315 3048664f85f14b60f1c60a82709e9d4a 393 Pfam PF00108 Thiolase, N-terminal domain 5 263 4.8E-98 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 Pfam PF08343 Ribonucleotide reductase N-terminal 9 89 3.9E-29 T 12-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 91 163 6.4E-16 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 95 688 2.5E-173 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 Pfam PF02867 Ribonucleotide reductase, barrel domain 168 616 3.5E-121 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 SUPERFAMILY SSF48168 8 166 1.44E-49 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 SUPERFAMILY SSF51998 167 689 1.95E-166 T 12-10-2018 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 8 700 0.0 T 12-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 Gene3D G3DSA:3.20.70.20 152 686 3.2E-184 T 12-10-2018 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 Gene3D G3DSA:1.10.1650.20 286 338 3.2E-184 T 12-10-2018 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 558 580 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 569 596 1.2E-27 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 376 387 1.2E-27 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 243 262 1.2E-27 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 459 481 1.2E-27 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 420 443 1.2E-27 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_1807 20d18c68392b17b32d0d94ec9e9ab434 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 487 510 1.2E-27 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_1750 d389f570dfa9b52b0649e89419f7b99d 567 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 21 565 2.7E-224 T 12-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 BAMF_1750 d389f570dfa9b52b0649e89419f7b99d 567 Gene3D G3DSA:3.60.15.10 24 454 8.3E-166 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_1750 d389f570dfa9b52b0649e89419f7b99d 567 Hamap MF_01491 Ribonuclease J [rnj]. 16 567 45.246 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 BAMF_1750 d389f570dfa9b52b0649e89419f7b99d 567 SMART SM00849 33 228 1.0E-14 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_1750 d389f570dfa9b52b0649e89419f7b99d 567 Gene3D G3DSA:3.10.20.580 461 567 1.9E-37 T 12-10-2018 BAMF_1750 d389f570dfa9b52b0649e89419f7b99d 567 Gene3D G3DSA:3.40.50.10710 220 370 8.3E-166 T 12-10-2018 BAMF_1750 d389f570dfa9b52b0649e89419f7b99d 567 Pfam PF00753 Metallo-beta-lactamase superfamily 32 179 3.7E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_1750 d389f570dfa9b52b0649e89419f7b99d 567 PIRSF PIRSF004803 12 567 1.0E-228 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 BAMF_1750 d389f570dfa9b52b0649e89419f7b99d 567 SUPERFAMILY SSF56281 22 436 3.28E-78 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_1750 d389f570dfa9b52b0649e89419f7b99d 567 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 374 419 1.3E-8 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain BAMF_3133 b58fd4f961fb85e5d2956efe4a25156e 81 Pfam PF10835 Protein of unknown function (DUF2573) 3 79 3.1E-41 T 12-10-2018 IPR020393 Uncharacterised protein family YusU BAMF_3133 b58fd4f961fb85e5d2956efe4a25156e 81 ProDom PD065427 YUSU IG COIL COILED BH3491 1 80 5.0E-33 T 12-10-2018 IPR020393 Uncharacterised protein family YusU BAMF_2798 3d98359844457a5733157b27e8ba8e94 434 PIRSF PIRSF005353 1 433 3.0E-170 T 12-10-2018 IPR026033 Purine permease PbuG-like BAMF_2798 3d98359844457a5733157b27e8ba8e94 434 Pfam PF00860 Permease family 14 394 2.2E-76 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BAMF_2046 af9858e7bda1ad7c87e3342d5dfbdb9e 74 Gene3D G3DSA:1.10.150.260 1 72 1.1E-30 T 12-10-2018 IPR036806 YozE SAM-like superfamily BAMF_2046 af9858e7bda1ad7c87e3342d5dfbdb9e 74 PIRSF PIRSF037262 1 72 1.1E-35 T 12-10-2018 IPR010673 Protein of unknown function UPF0346 BAMF_2046 af9858e7bda1ad7c87e3342d5dfbdb9e 74 SUPERFAMILY SSF140652 1 71 4.19E-30 T 12-10-2018 IPR036806 YozE SAM-like superfamily BAMF_2046 af9858e7bda1ad7c87e3342d5dfbdb9e 74 Hamap MF_01538 UPF0346 protein . 1 70 23.177 T 12-10-2018 IPR010673 Protein of unknown function UPF0346 BAMF_2046 af9858e7bda1ad7c87e3342d5dfbdb9e 74 Pfam PF06855 YozE SAM-like fold 3 68 6.6E-28 T 12-10-2018 IPR023089 YozE SAM-like domain BAMF_3199 591f75d0c195ba76622f76d9be283a50 80 Pfam PF00403 Heavy-metal-associated domain 17 78 2.8E-17 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BAMF_3199 591f75d0c195ba76622f76d9be283a50 80 PRINTS PR00944 Copper ion binding protein signature 40 53 1.5E-8 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 BAMF_3199 591f75d0c195ba76622f76d9be283a50 80 PRINTS PR00944 Copper ion binding protein signature 66 79 1.5E-8 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 BAMF_3199 591f75d0c195ba76622f76d9be283a50 80 PRINTS PR00944 Copper ion binding protein signature 15 27 1.5E-8 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 BAMF_3199 591f75d0c195ba76622f76d9be283a50 80 PRINTS PR00944 Copper ion binding protein signature 27 40 1.5E-8 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 BAMF_3199 591f75d0c195ba76622f76d9be283a50 80 ProSitePatterns PS01047 Heavy-metal-associated domain. 20 49 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BAMF_3199 591f75d0c195ba76622f76d9be283a50 80 Gene3D G3DSA:3.30.70.100 11 79 3.7E-26 T 12-10-2018 BAMF_3199 591f75d0c195ba76622f76d9be283a50 80 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 15 80 2.6E-30 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 BAMF_3199 591f75d0c195ba76622f76d9be283a50 80 SUPERFAMILY SSF55008 13 80 2.62E-21 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BAMF_1211 26a1c108b8ab5a0199a5f6172599bd0f 560 PIRSF PIRSF002741 20 560 1.4E-165 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BAMF_1211 26a1c108b8ab5a0199a5f6172599bd0f 560 Gene3D G3DSA:3.40.190.10 71 541 1.6E-195 T 12-10-2018 BAMF_1211 26a1c108b8ab5a0199a5f6172599bd0f 560 SUPERFAMILY SSF53850 58 558 2.17E-150 T 12-10-2018 BAMF_1211 26a1c108b8ab5a0199a5f6172599bd0f 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 105 475 2.4E-99 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain BAMF_1211 26a1c108b8ab5a0199a5f6172599bd0f 560 Gene3D G3DSA:3.90.76.10 93 212 1.6E-195 T 12-10-2018 BAMF_1211 26a1c108b8ab5a0199a5f6172599bd0f 560 Gene3D G3DSA:3.10.105.10 305 527 1.6E-195 T 12-10-2018 BAMF_1211 26a1c108b8ab5a0199a5f6172599bd0f 560 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 110 132 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site BAMF_2062 51e876f32cfd3cde111e6e960e2708a2 383 SUPERFAMILY SSF50956 31 379 3.4E-96 T 12-10-2018 BAMF_2062 51e876f32cfd3cde111e6e960e2708a2 383 Gene3D G3DSA:2.120.10.30 29 383 1.2E-156 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BAMF_2062 51e876f32cfd3cde111e6e960e2708a2 383 Pfam PF02333 Phytase 5 380 3.3E-191 T 12-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 PIRSF PIRSF000729 1 364 4.5E-132 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 SMART SM00359 277 359 1.2E-15 T 12-10-2018 IPR002478 PUA domain GO:0003723 BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 2.6E-51 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 PRINTS PR00474 Glutamate 5-kinase family signature 147 174 2.6E-51 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 PRINTS PR00474 Glutamate 5-kinase family signature 41 55 2.6E-51 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 PRINTS PR00474 Glutamate 5-kinase family signature 75 103 2.6E-51 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 PRINTS PR00474 Glutamate 5-kinase family signature 115 136 2.6E-51 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 Gene3D G3DSA:2.30.130.10 266 362 1.5E-21 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 Hamap MF_00456 Glutamate 5-kinase [proB]. 4 258 36.936 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 Gene3D G3DSA:3.40.1160.10 1 261 2.8E-83 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 Pfam PF00696 Amino acid kinase family 4 232 8.6E-47 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 TIGRFAM TIGR01027 proB: glutamate 5-kinase 4 361 4.3E-141 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 Pfam PF01472 PUA domain 277 346 2.0E-16 T 12-10-2018 IPR002478 PUA domain GO:0003723 BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 SUPERFAMILY SSF88697 277 361 4.59E-15 T 12-10-2018 IPR015947 PUA-like superfamily BAMF_1396 7014be2d6062e145dd57f42bc7cdd514 370 SUPERFAMILY SSF53633 4 254 7.2E-70 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BAMF_3389 f879212a2e646d571432e35668b11a5c 282 Gene3D G3DSA:3.30.1180.10 153 281 8.6E-49 T 12-10-2018 BAMF_3389 f879212a2e646d571432e35668b11a5c 282 SUPERFAMILY SSF82549 1 281 8.89E-96 T 12-10-2018 BAMF_3389 f879212a2e646d571432e35668b11a5c 282 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 280 3.1E-101 T 12-10-2018 IPR003797 DegV BAMF_3389 f879212a2e646d571432e35668b11a5c 282 Gene3D G3DSA:3.40.50.10170 1 152 1.3E-58 T 12-10-2018 BAMF_3389 f879212a2e646d571432e35668b11a5c 282 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 278 2.8E-105 T 12-10-2018 IPR003797 DegV BAMF_3172 0a1766e0be8e1508d792283d3c04e548 312 SUPERFAMILY SSF53807 37 307 1.1E-56 T 12-10-2018 BAMF_3172 0a1766e0be8e1508d792283d3c04e548 312 Gene3D G3DSA:3.40.50.1980 26 158 1.8E-24 T 12-10-2018 BAMF_3172 0a1766e0be8e1508d792283d3c04e548 312 Pfam PF01497 Periplasmic binding protein 59 288 6.1E-37 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BAMF_3172 0a1766e0be8e1508d792283d3c04e548 312 Gene3D G3DSA:3.40.50.1980 159 312 4.5E-64 T 12-10-2018 BAMF_3251 7691724cc16ae208dfded5cc7533a9d5 426 Gene3D G3DSA:3.40.630.10 55 413 4.7E-92 T 12-10-2018 BAMF_3251 7691724cc16ae208dfded5cc7533a9d5 426 SUPERFAMILY SSF52025 118 205 2.88E-12 T 12-10-2018 BAMF_3251 7691724cc16ae208dfded5cc7533a9d5 426 Gene3D G3DSA:3.50.30.30 95 211 4.7E-92 T 12-10-2018 BAMF_3251 7691724cc16ae208dfded5cc7533a9d5 426 SUPERFAMILY SSF53187 30 422 4.77E-49 T 12-10-2018 BAMF_3251 7691724cc16ae208dfded5cc7533a9d5 426 Pfam PF02225 PA domain 136 201 1.1E-12 T 12-10-2018 IPR003137 PA domain BAMF_3251 7691724cc16ae208dfded5cc7533a9d5 426 Pfam PF04389 Peptidase family M28 221 417 1.1E-36 T 12-10-2018 IPR007484 Peptidase M28 BAMF_1039 71ecbbc76d002e9950576d140507e541 291 SUPERFAMILY SSF46785 1 87 1.33E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1039 71ecbbc76d002e9950576d140507e541 291 Gene3D G3DSA:3.40.190.10 164 259 1.6E-25 T 12-10-2018 BAMF_1039 71ecbbc76d002e9950576d140507e541 291 Gene3D G3DSA:3.40.190.10 93 163 1.6E-25 T 12-10-2018 BAMF_1039 71ecbbc76d002e9950576d140507e541 291 SUPERFAMILY SSF53850 92 287 3.15E-28 T 12-10-2018 BAMF_1039 71ecbbc76d002e9950576d140507e541 291 Pfam PF03466 LysR substrate binding domain 88 288 8.9E-33 T 12-10-2018 IPR005119 LysR, substrate-binding BAMF_1039 71ecbbc76d002e9950576d140507e541 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.4E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_1039 71ecbbc76d002e9950576d140507e541 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_1039 71ecbbc76d002e9950576d140507e541 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_1039 71ecbbc76d002e9950576d140507e541 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_1039 71ecbbc76d002e9950576d140507e541 291 Gene3D G3DSA:1.10.10.10 1 92 1.7E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2647 1946df96ecaa5e36dc7bf4cfa5b8a1e7 74 ProSitePatterns PS00622 LuxR-type HTH domain signature. 26 53 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_2647 1946df96ecaa5e36dc7bf4cfa5b8a1e7 74 SUPERFAMILY SSF46894 8 72 3.74E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_2647 1946df96ecaa5e36dc7bf4cfa5b8a1e7 74 Pfam PF00196 Bacterial regulatory proteins, luxR family 12 64 3.4E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_2647 1946df96ecaa5e36dc7bf4cfa5b8a1e7 74 SMART SM00421 9 66 3.9E-25 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_2647 1946df96ecaa5e36dc7bf4cfa5b8a1e7 74 Gene3D G3DSA:1.10.10.10 1 74 1.2E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2647 1946df96ecaa5e36dc7bf4cfa5b8a1e7 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 26 42 1.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_2647 1946df96ecaa5e36dc7bf4cfa5b8a1e7 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 42 54 1.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_2647 1946df96ecaa5e36dc7bf4cfa5b8a1e7 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 12 26 1.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_2741 cfe72d54db1de3d443c872381edc83ad 167 SUPERFAMILY SSF52833 1 160 8.02E-43 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_2741 cfe72d54db1de3d443c872381edc83ad 167 Pfam PF08534 Redoxin 19 156 2.3E-21 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BAMF_2741 cfe72d54db1de3d443c872381edc83ad 167 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 12-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 BAMF_2741 cfe72d54db1de3d443c872381edc83ad 167 Gene3D G3DSA:3.40.30.10 1 164 4.1E-47 T 12-10-2018 BAMF_2741 cfe72d54db1de3d443c872381edc83ad 167 Hamap MF_00269 Thiol peroxidase [tpx]. 3 163 36.701 T 12-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 BAMF_2553 7b4c251ed892d426a47606a611110cd2 214 Gene3D G3DSA:1.10.3720.10 1 213 6.6E-54 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2553 7b4c251ed892d426a47606a611110cd2 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 211 1.9E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_2553 7b4c251ed892d426a47606a611110cd2 214 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 1.6E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BAMF_2553 7b4c251ed892d426a47606a611110cd2 214 SUPERFAMILY SSF161098 12 198 3.01E-45 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1848 722aa3d27e6355ad018867cac5523bae 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 9.6E-28 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BAMF_1848 722aa3d27e6355ad018867cac5523bae 338 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 165 193 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BAMF_1848 722aa3d27e6355ad018867cac5523bae 338 SMART SM00829 8 334 9.7E-8 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BAMF_1848 722aa3d27e6355ad018867cac5523bae 338 SUPERFAMILY SSF51735 134 304 8.13E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1848 722aa3d27e6355ad018867cac5523bae 338 Gene3D G3DSA:3.90.180.10 24 333 5.5E-118 T 12-10-2018 BAMF_1848 722aa3d27e6355ad018867cac5523bae 338 Gene3D G3DSA:3.40.50.720 146 285 5.5E-118 T 12-10-2018 BAMF_1848 722aa3d27e6355ad018867cac5523bae 338 SUPERFAMILY SSF50129 2 155 2.59E-45 T 12-10-2018 IPR011032 GroES-like superfamily BAMF_1848 722aa3d27e6355ad018867cac5523bae 338 Pfam PF00107 Zinc-binding dehydrogenase 172 300 7.0E-29 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BAMF_1848 722aa3d27e6355ad018867cac5523bae 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BAMF_3212 5cf6d45ec131a8bc3c38e24a9bf081a7 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3212 5cf6d45ec131a8bc3c38e24a9bf081a7 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3212 5cf6d45ec131a8bc3c38e24a9bf081a7 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3212 5cf6d45ec131a8bc3c38e24a9bf081a7 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.8E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3212 5cf6d45ec131a8bc3c38e24a9bf081a7 296 Gene3D G3DSA:1.10.10.10 1 80 1.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3212 5cf6d45ec131a8bc3c38e24a9bf081a7 296 SUPERFAMILY SSF53850 86 294 6.12E-28 T 12-10-2018 BAMF_3212 5cf6d45ec131a8bc3c38e24a9bf081a7 296 Pfam PF03466 LysR substrate binding domain 86 287 8.7E-33 T 12-10-2018 IPR005119 LysR, substrate-binding BAMF_3212 5cf6d45ec131a8bc3c38e24a9bf081a7 296 SUPERFAMILY SSF46785 2 109 5.34E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3212 5cf6d45ec131a8bc3c38e24a9bf081a7 296 Gene3D G3DSA:3.40.190.290 90 293 1.3E-30 T 12-10-2018 BAMF_0802 d2d2883c7412489d8059fd46ae3faaa8 530 Gene3D G3DSA:1.20.1250.20 269 434 3.1E-17 T 12-10-2018 BAMF_0802 d2d2883c7412489d8059fd46ae3faaa8 530 SUPERFAMILY SSF103473 9 515 3.14E-70 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0802 d2d2883c7412489d8059fd46ae3faaa8 530 Pfam PF07690 Major Facilitator Superfamily 19 416 1.3E-52 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0802 d2d2883c7412489d8059fd46ae3faaa8 530 Gene3D G3DSA:1.20.1720.10 15 222 1.5E-46 T 12-10-2018 BAMF_0802 d2d2883c7412489d8059fd46ae3faaa8 530 PRINTS PR01036 Tetracycline resistance protein TetB signature 204 222 3.6E-5 T 12-10-2018 BAMF_0802 d2d2883c7412489d8059fd46ae3faaa8 530 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 3.6E-5 T 12-10-2018 BAMF_0802 d2d2883c7412489d8059fd46ae3faaa8 530 PRINTS PR01036 Tetracycline resistance protein TetB signature 77 99 3.6E-5 T 12-10-2018 BAMF_2596 80dfbec24072edde7a9d22576a99bc8a 285 SUPERFAMILY SSF55021 193 281 4.93E-22 T 12-10-2018 BAMF_2596 80dfbec24072edde7a9d22576a99bc8a 285 Gene3D G3DSA:3.40.190.10 84 173 2.2E-54 T 12-10-2018 BAMF_2596 80dfbec24072edde7a9d22576a99bc8a 285 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 159 181 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BAMF_2596 80dfbec24072edde7a9d22576a99bc8a 285 Gene3D G3DSA:3.30.70.260 194 285 4.4E-24 T 12-10-2018 BAMF_2596 80dfbec24072edde7a9d22576a99bc8a 285 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 230 237 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BAMF_2596 80dfbec24072edde7a9d22576a99bc8a 285 SUPERFAMILY SSF53850 1 185 1.19E-51 T 12-10-2018 BAMF_2596 80dfbec24072edde7a9d22576a99bc8a 285 Gene3D G3DSA:3.40.190.10 5 182 2.2E-54 T 12-10-2018 BAMF_2596 80dfbec24072edde7a9d22576a99bc8a 285 PIRSF PIRSF001500 1 285 2.7E-69 T 12-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BAMF_2596 80dfbec24072edde7a9d22576a99bc8a 285 Pfam PF00800 Prephenate dehydratase 3 185 1.3E-55 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BAMF_0333 7d96834ba4658b6e528ac8d00e43ffe2 440 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 9 428 7.9E-189 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 BAMF_0333 7d96834ba4658b6e528ac8d00e43ffe2 440 SUPERFAMILY SSF51679 4 434 1.44E-143 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_0333 7d96834ba4658b6e528ac8d00e43ffe2 440 Pfam PF00296 Luciferase-like monooxygenase 18 381 1.2E-78 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BAMF_0333 7d96834ba4658b6e528ac8d00e43ffe2 440 PIRSF PIRSF000337 2 440 4.1E-168 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 BAMF_0333 7d96834ba4658b6e528ac8d00e43ffe2 440 Gene3D G3DSA:3.20.20.30 1 440 4.6E-172 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_2292 521ed7a7071ab3fa44e42953d486cf95 142 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 3 130 5.9E-43 T 12-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 BAMF_2292 521ed7a7071ab3fa44e42953d486cf95 142 Gene3D G3DSA:3.10.180.10 1 131 1.6E-41 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_2292 521ed7a7071ab3fa44e42953d486cf95 142 SUPERFAMILY SSF54593 2 133 2.48E-32 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_2292 521ed7a7071ab3fa44e42953d486cf95 142 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 115 1.8E-24 T 12-10-2018 BAMF_2292 521ed7a7071ab3fa44e42953d486cf95 142 ProSitePatterns PS00934 Glyoxalase I signature 1. 6 27 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BAMF_1199 fcd11f402e7e60795e598b52b478806c 59 Pfam PF14168 YjzC-like protein 1 55 1.6E-28 T 12-10-2018 IPR025549 YjzC-like protein BAMF_3547 708699bb7ea6c4932e63639d35bda23c 429 Gene3D G3DSA:3.65.10.10 6 413 5.7E-160 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BAMF_3547 708699bb7ea6c4932e63639d35bda23c 429 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 8.9E-176 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_3547 708699bb7ea6c4932e63639d35bda23c 429 SUPERFAMILY SSF55205 1 415 2.29E-135 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BAMF_3547 708699bb7ea6c4932e63639d35bda23c 429 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 42.648 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_3547 708699bb7ea6c4932e63639d35bda23c 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 406 1.4E-97 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 BAMF_3547 708699bb7ea6c4932e63639d35bda23c 429 Gene3D G3DSA:3.65.10.10 21 228 5.7E-160 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BAMF_3137 2a98fd368ebac089f4f737b608aae2bb 280 Pfam PF00106 short chain dehydrogenase 4 194 1.1E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3137 2a98fd368ebac089f4f737b608aae2bb 280 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 183 0.0045 T 12-10-2018 BAMF_3137 2a98fd368ebac089f4f737b608aae2bb 280 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_3137 2a98fd368ebac089f4f737b608aae2bb 280 Gene3D G3DSA:3.40.50.720 2 263 9.4E-72 T 12-10-2018 BAMF_3137 2a98fd368ebac089f4f737b608aae2bb 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 7.1E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3137 2a98fd368ebac089f4f737b608aae2bb 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.1E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3137 2a98fd368ebac089f4f737b608aae2bb 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.1E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3137 2a98fd368ebac089f4f737b608aae2bb 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 7.1E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3137 2a98fd368ebac089f4f737b608aae2bb 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.1E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3137 2a98fd368ebac089f4f737b608aae2bb 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 7.1E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3137 2a98fd368ebac089f4f737b608aae2bb 280 SUPERFAMILY SSF51735 3 243 6.32E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3137 2a98fd368ebac089f4f737b608aae2bb 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 6.2E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3137 2a98fd368ebac089f4f737b608aae2bb 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.2E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3137 2a98fd368ebac089f4f737b608aae2bb 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 6.2E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3574 6156e59e809ebeb51e26799556168f83 290 SUPERFAMILY SSF52768 14 288 2.34E-86 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily BAMF_3574 6156e59e809ebeb51e26799556168f83 290 PIRSF PIRSF036979 1 290 2.6E-95 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BAMF_3574 6156e59e809ebeb51e26799556168f83 290 TIGRFAM TIGR01230 agmatinase: agmatinase 10 286 1.1E-122 T 12-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 BAMF_3574 6156e59e809ebeb51e26799556168f83 290 Pfam PF00491 Arginase family 22 285 1.3E-79 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BAMF_3574 6156e59e809ebeb51e26799556168f83 290 Gene3D G3DSA:3.40.800.10 17 290 1.8E-95 T 12-10-2018 BAMF_3574 6156e59e809ebeb51e26799556168f83 290 ProSitePatterns PS01053 Arginase family signature. 214 235 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 BAMF_1723 02b1505689146976216041c66ab1a045 240 SUPERFAMILY SSF53633 4 238 4.71E-74 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BAMF_1723 02b1505689146976216041c66ab1a045 240 Pfam PF00696 Amino acid kinase family 7 217 7.5E-29 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BAMF_1723 02b1505689146976216041c66ab1a045 240 Gene3D G3DSA:3.40.1160.10 1 239 4.3E-81 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BAMF_1723 02b1505689146976216041c66ab1a045 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 4.4E-103 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 BAMF_1723 02b1505689146976216041c66ab1a045 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 45.148 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 BAMF_1723 02b1505689146976216041c66ab1a045 240 PIRSF PIRSF005650 1 240 1.5E-97 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 BAMF_2462 51aa7a771c809e1ebaa03c2d7bf8dd39 189 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 187 6.5E-60 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BAMF_2462 51aa7a771c809e1ebaa03c2d7bf8dd39 189 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 66 1.3E-14 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BAMF_2462 51aa7a771c809e1ebaa03c2d7bf8dd39 189 Gene3D G3DSA:3.40.50.620 1 188 6.1E-68 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_2462 51aa7a771c809e1ebaa03c2d7bf8dd39 189 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 188 32.665 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BAMF_2462 51aa7a771c809e1ebaa03c2d7bf8dd39 189 Pfam PF01467 Cytidylyltransferase-like 6 162 1.7E-36 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BAMF_2462 51aa7a771c809e1ebaa03c2d7bf8dd39 189 SUPERFAMILY SSF52374 1 187 1.6E-55 T 12-10-2018 BAMF_0805 5898f21c675fb6b88463cc114a51028f 294 PIRSF PIRSF016184 1 293 2.1E-74 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BAMF_0805 5898f21c675fb6b88463cc114a51028f 294 Gene3D G3DSA:3.10.310.10 1 127 2.0E-36 T 12-10-2018 BAMF_0805 5898f21c675fb6b88463cc114a51028f 294 Pfam PF02567 Phenazine biosynthesis-like protein 9 286 6.6E-82 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BAMF_0805 5898f21c675fb6b88463cc114a51028f 294 Gene3D G3DSA:3.10.310.10 128 282 4.5E-39 T 12-10-2018 BAMF_0805 5898f21c675fb6b88463cc114a51028f 294 SUPERFAMILY SSF54506 5 286 3.43E-62 T 12-10-2018 BAMF_0805 5898f21c675fb6b88463cc114a51028f 294 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 290 1.9E-105 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 BAMF_2980 f5cd5b0180e8a955f79055afc6eb20a0 176 SUPERFAMILY SSF109604 16 137 3.81E-21 T 12-10-2018 BAMF_2980 f5cd5b0180e8a955f79055afc6eb20a0 176 SMART SM00471 19 148 4.1E-9 T 12-10-2018 IPR003607 HD/PDEase domain BAMF_2980 f5cd5b0180e8a955f79055afc6eb20a0 176 Gene3D G3DSA:1.10.3210.10 7 168 3.9E-18 T 12-10-2018 BAMF_2980 f5cd5b0180e8a955f79055afc6eb20a0 176 Pfam PF01966 HD domain 25 137 4.9E-15 T 12-10-2018 IPR006674 HD domain BAMF_2980 f5cd5b0180e8a955f79055afc6eb20a0 176 TIGRFAM TIGR00277 HDIG: HDIG domain 22 91 1.6E-8 T 12-10-2018 IPR006675 HDIG domain BAMF_3590 c80fbac4ed084648b48008ac80eda5dd 317 Pfam PF12679 ABC-2 family transporter protein 6 315 3.8E-15 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 BAMF_2435 957b39657ca5826a6fe03adf74e66fb4 330 Hamap MF_01562 UPF0365 protein . 3 323 49.856 T 12-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity BAMF_2435 957b39657ca5826a6fe03adf74e66fb4 330 Pfam PF12127 SigmaW regulon antibacterial 10 319 4.4E-164 T 12-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity BAMF_2772 a00640dad7a7345a7db6d901f2df6bb0 206 Gene3D G3DSA:3.30.1330.60 45 206 1.1E-44 T 12-10-2018 IPR036737 OmpA-like domain superfamily BAMF_2772 a00640dad7a7345a7db6d901f2df6bb0 206 SUPERFAMILY SSF103088 83 200 1.22E-28 T 12-10-2018 IPR036737 OmpA-like domain superfamily BAMF_2772 a00640dad7a7345a7db6d901f2df6bb0 206 Pfam PF00691 OmpA family 95 194 5.5E-19 T 12-10-2018 IPR006665 OmpA-like domain BAMF_2772 a00640dad7a7345a7db6d901f2df6bb0 206 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 1 37 5.6E-14 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain BAMF_2003 78dd812640a577308b64c4800267acfb 627 Gene3D G3DSA:1.50.10.20 33 306 2.6E-192 T 12-10-2018 BAMF_2003 78dd812640a577308b64c4800267acfb 627 SUPERFAMILY SSF48239 35 297 7.06E-48 T 12-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid BAMF_2003 78dd812640a577308b64c4800267acfb 627 Gene3D G3DSA:1.50.10.20 17 617 2.6E-192 T 12-10-2018 BAMF_2003 78dd812640a577308b64c4800267acfb 627 ProSitePatterns PS01074 Terpene synthases signature. 476 490 - T 12-10-2018 IPR002365 Terpene synthase, conserved site GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 BAMF_2003 78dd812640a577308b64c4800267acfb 627 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 308 617 1.4E-93 T 12-10-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 BAMF_2003 78dd812640a577308b64c4800267acfb 627 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 17 295 1.8E-62 T 12-10-2018 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 BAMF_2003 78dd812640a577308b64c4800267acfb 627 SUPERFAMILY SSF48239 305 619 6.59E-91 T 12-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid BAMF_2003 78dd812640a577308b64c4800267acfb 627 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 16 618 1.0E-113 T 12-10-2018 IPR018333 Squalene cyclase GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 BAMF_0009 72500279437ed86dca9191aa37686997 488 SMART SM01240 9 474 0.0 T 12-10-2018 BAMF_0009 72500279437ed86dca9191aa37686997 488 SUPERFAMILY SSF54631 66 208 6.36E-32 T 12-10-2018 BAMF_0009 72500279437ed86dca9191aa37686997 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 10 487 86.098 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BAMF_0009 72500279437ed86dca9191aa37686997 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 456 4.4E-208 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BAMF_0009 72500279437ed86dca9191aa37686997 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 298 310 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 BAMF_0009 72500279437ed86dca9191aa37686997 488 Pfam PF00571 CBS domain 153 204 3.9E-9 T 12-10-2018 IPR000644 CBS domain BAMF_0009 72500279437ed86dca9191aa37686997 488 Pfam PF00571 CBS domain 97 144 1.2E-7 T 12-10-2018 IPR000644 CBS domain BAMF_0009 72500279437ed86dca9191aa37686997 488 PIRSF PIRSF000130 1 488 1.0E-212 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BAMF_0009 72500279437ed86dca9191aa37686997 488 SMART SM00116 161 209 5.8E-9 T 12-10-2018 IPR000644 CBS domain BAMF_0009 72500279437ed86dca9191aa37686997 488 SMART SM00116 98 148 1.3E-8 T 12-10-2018 IPR000644 CBS domain BAMF_0009 72500279437ed86dca9191aa37686997 488 Gene3D G3DSA:3.20.20.70 1 487 1.8E-227 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_0009 72500279437ed86dca9191aa37686997 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 474 1.0E-168 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 BAMF_0009 72500279437ed86dca9191aa37686997 488 SUPERFAMILY SSF51412 6 478 5.63E-127 T 12-10-2018 BAMF_0042 79e83919f8454c2a78661bdb1e58511d 293 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 21 287 6.9E-89 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BAMF_0042 79e83919f8454c2a78661bdb1e58511d 293 Gene3D G3DSA:3.40.50.150 1 216 3.3E-73 T 12-10-2018 BAMF_0042 79e83919f8454c2a78661bdb1e58511d 293 Pfam PF00398 Ribosomal RNA adenine dimethylase 21 281 6.8E-85 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BAMF_0042 79e83919f8454c2a78661bdb1e58511d 293 SUPERFAMILY SSF53335 17 291 8.05E-74 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_0042 79e83919f8454c2a78661bdb1e58511d 293 Gene3D G3DSA:1.10.8.100 220 292 4.0E-20 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 BAMF_0042 79e83919f8454c2a78661bdb1e58511d 293 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 53 80 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 BAMF_0042 79e83919f8454c2a78661bdb1e58511d 293 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 21 289 55.625 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BAMF_0042 79e83919f8454c2a78661bdb1e58511d 293 SMART SM00650 37 213 1.2E-84 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 BAMF_1731 0166d4c214bef4d964dd1871aa1a57d4 156 Gene3D G3DSA:2.30.30.180 88 154 4.9E-25 T 12-10-2018 BAMF_1731 0166d4c214bef4d964dd1871aa1a57d4 156 Pfam PF02576 RimP N-terminal domain 13 84 2.9E-30 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal BAMF_1731 0166d4c214bef4d964dd1871aa1a57d4 156 Pfam PF17384 RimP C-terminal SH3 domain 87 156 2.9E-22 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal BAMF_1731 0166d4c214bef4d964dd1871aa1a57d4 156 Gene3D G3DSA:3.30.300.70 1 81 2.4E-30 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily BAMF_1731 0166d4c214bef4d964dd1871aa1a57d4 156 SUPERFAMILY SSF75420 3 84 2.09E-27 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily BAMF_1731 0166d4c214bef4d964dd1871aa1a57d4 156 SUPERFAMILY SSF74942 85 156 7.59E-21 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily BAMF_1731 0166d4c214bef4d964dd1871aa1a57d4 156 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 7 156 24.732 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 BAMF_0161 32460fe4f3aaa8eaae780134581cca9e 348 Pfam PF00107 Zinc-binding dehydrogenase 173 293 2.0E-9 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BAMF_0161 32460fe4f3aaa8eaae780134581cca9e 348 SUPERFAMILY SSF51735 140 285 7.28E-20 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0161 32460fe4f3aaa8eaae780134581cca9e 348 SMART SM00829 7 311 0.0033 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BAMF_0161 32460fe4f3aaa8eaae780134581cca9e 348 Gene3D G3DSA:3.40.50.720 150 282 7.0E-76 T 12-10-2018 BAMF_0161 32460fe4f3aaa8eaae780134581cca9e 348 Gene3D G3DSA:3.90.180.10 11 320 7.0E-76 T 12-10-2018 BAMF_0161 32460fe4f3aaa8eaae780134581cca9e 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 133 1.4E-30 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BAMF_0161 32460fe4f3aaa8eaae780134581cca9e 348 SUPERFAMILY SSF50129 1 172 9.74E-50 T 12-10-2018 IPR011032 GroES-like superfamily BAMF_3001 c25c284e7bfbebe39217036c523235fd 496 SUPERFAMILY SSF53187 176 488 2.26E-112 T 12-10-2018 BAMF_3001 c25c284e7bfbebe39217036c523235fd 496 SUPERFAMILY SSF52949 12 177 3.18E-34 T 12-10-2018 BAMF_3001 c25c284e7bfbebe39217036c523235fd 496 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 341 348 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BAMF_3001 c25c284e7bfbebe39217036c523235fd 496 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 15 142 2.0E-23 T 12-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BAMF_3001 c25c284e7bfbebe39217036c523235fd 496 Gene3D G3DSA:3.40.220.10 2 153 2.5E-37 T 12-10-2018 BAMF_3001 c25c284e7bfbebe39217036c523235fd 496 Gene3D G3DSA:3.40.630.10 166 491 1.2E-126 T 12-10-2018 BAMF_3001 c25c284e7bfbebe39217036c523235fd 496 PRINTS PR00481 Cytosol aminopeptidase signature 337 357 1.0E-50 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BAMF_3001 c25c284e7bfbebe39217036c523235fd 496 PRINTS PR00481 Cytosol aminopeptidase signature 365 380 1.0E-50 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BAMF_3001 c25c284e7bfbebe39217036c523235fd 496 PRINTS PR00481 Cytosol aminopeptidase signature 278 299 1.0E-50 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BAMF_3001 c25c284e7bfbebe39217036c523235fd 496 PRINTS PR00481 Cytosol aminopeptidase signature 256 273 1.0E-50 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BAMF_3001 c25c284e7bfbebe39217036c523235fd 496 PRINTS PR00481 Cytosol aminopeptidase signature 315 336 1.0E-50 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BAMF_3001 c25c284e7bfbebe39217036c523235fd 496 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 494 35.731 T 12-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 BAMF_3001 c25c284e7bfbebe39217036c523235fd 496 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 180 485 5.6E-117 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BAMF_3266 01de2479b2464e6f5d6d6e643da7c6b9 442 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 2 442 1.9E-160 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BAMF_3266 01de2479b2464e6f5d6d6e643da7c6b9 442 PIRSF PIRSF002746 1 442 8.6E-160 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BAMF_3266 01de2479b2464e6f5d6d6e643da7c6b9 442 Pfam PF02447 GntP family permease 1 439 4.9E-169 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BAMF_0310 ee1f8ff5b52f31aed2906ee233f3182c 211 SUPERFAMILY SSF51366 3 209 9.43E-41 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BAMF_0310 ee1f8ff5b52f31aed2906ee233f3182c 211 SMART SM00934 2 203 6.9E-44 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_0310 ee1f8ff5b52f31aed2906ee233f3182c 211 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 2 202 4.3E-29 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BAMF_0310 ee1f8ff5b52f31aed2906ee233f3182c 211 Gene3D G3DSA:3.20.20.70 1 210 3.0E-74 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_0310 ee1f8ff5b52f31aed2906ee233f3182c 211 TIGRFAM TIGR03128 RuMP_HxlA: 3-hexulose-6-phosphate synthase 2 207 1.7E-87 T 12-10-2018 IPR017553 3-hexulose-6-phosphate synthase GO:0005975|GO:0043801 KEGG: 00030+4.1.2.43|KEGG: 00680+4.1.2.43|MetaCyc: PWY-1861|MetaCyc: PWY-7796 BAMF_2006 46f12436af44d4f7e1b65404649fe3e4 323 Gene3D G3DSA:1.20.1530.20 1 307 4.5E-112 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily BAMF_2006 46f12436af44d4f7e1b65404649fe3e4 323 TIGRFAM TIGR00841 bass: bile acid transporter 8 307 1.4E-104 T 12-10-2018 IPR004710 Bile acid:sodium symporter BAMF_2006 46f12436af44d4f7e1b65404649fe3e4 323 Pfam PF01758 Sodium Bile acid symporter family 41 220 1.9E-49 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 BAMF_0669 dd3b4a98d29e40dab5dc83dd7a612e3c 650 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 265 611 1.1E-100 T 12-10-2018 IPR018647 Domain of unknown function DUF2075 BAMF_0669 dd3b4a98d29e40dab5dc83dd7a612e3c 650 SUPERFAMILY SSF52540 164 384 5.33E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0669 dd3b4a98d29e40dab5dc83dd7a612e3c 650 SUPERFAMILY SSF52540 258 612 9.76E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0669 dd3b4a98d29e40dab5dc83dd7a612e3c 650 Gene3D G3DSA:3.40.50.300 188 370 1.3E-8 T 12-10-2018 BAMF_0669 dd3b4a98d29e40dab5dc83dd7a612e3c 650 SMART SM00382 264 410 0.0019 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2217 aaae9fec26ca18c7e04b8c8e6ed4da7f 196 Pfam PF07670 Nucleoside recognition 44 150 1.2E-11 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BAMF_2658 22a587ac310717d19c36d7b5572dbf93 257 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 12-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 BAMF_2658 22a587ac310717d19c36d7b5572dbf93 257 SUPERFAMILY SSF52402 1 242 2.0E-74 T 12-10-2018 BAMF_2658 22a587ac310717d19c36d7b5572dbf93 257 PIRSF PIRSF000090 1 257 1.0E-79 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 BAMF_2658 22a587ac310717d19c36d7b5572dbf93 257 SMART SM00893 21 211 1.9E-58 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BAMF_2658 22a587ac310717d19c36d7b5572dbf93 257 Pfam PF01012 Electron transfer flavoprotein domain 23 206 8.6E-46 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BAMF_2658 22a587ac310717d19c36d7b5572dbf93 257 Gene3D G3DSA:3.40.50.620 1 256 3.9E-81 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_3486 f26fa557183059398db002dfcbe5b806 138 SMART SM00347 25 124 1.2E-33 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3486 f26fa557183059398db002dfcbe5b806 138 Pfam PF01047 MarR family 33 88 5.4E-20 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3486 f26fa557183059398db002dfcbe5b806 138 Gene3D G3DSA:1.10.10.10 1 137 1.4E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3486 f26fa557183059398db002dfcbe5b806 138 SUPERFAMILY SSF46785 4 135 1.59E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1769 2e66943a1041b9403805f463cba3adff 264 PIRSF PIRSF004789 1 263 6.3E-112 T 12-10-2018 IPR005235 Metallophosphoesterase, YmdB-like BAMF_1769 2e66943a1041b9403805f463cba3adff 264 SUPERFAMILY SSF56300 1 256 4.11E-95 T 12-10-2018 BAMF_1769 2e66943a1041b9403805f463cba3adff 264 Pfam PF13277 YmdB-like protein 4 254 2.3E-115 T 12-10-2018 IPR005235 Metallophosphoesterase, YmdB-like BAMF_1769 2e66943a1041b9403805f463cba3adff 264 Gene3D G3DSA:3.60.21.10 1 264 8.5E-122 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BAMF_1769 2e66943a1041b9403805f463cba3adff 264 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 264 6.9E-130 T 12-10-2018 IPR005235 Metallophosphoesterase, YmdB-like BAMF_0277 1337678a8e6aa707052814b3d50a4270 317 PIRSF PIRSF000102 3 314 1.5E-116 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BAMF_0277 1337678a8e6aa707052814b3d50a4270 317 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 1.7E-51 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BAMF_0277 1337678a8e6aa707052814b3d50a4270 317 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 1.7E-51 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BAMF_0277 1337678a8e6aa707052814b3d50a4270 317 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 1.7E-51 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BAMF_0277 1337678a8e6aa707052814b3d50a4270 317 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 1.7E-51 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BAMF_0277 1337678a8e6aa707052814b3d50a4270 317 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 1.7E-51 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BAMF_0277 1337678a8e6aa707052814b3d50a4270 317 Gene3D G3DSA:3.90.110.10 149 314 2.9E-67 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BAMF_0277 1337678a8e6aa707052814b3d50a4270 317 SUPERFAMILY SSF51735 3 146 6.13E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0277 1337678a8e6aa707052814b3d50a4270 317 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 11 309 4.4E-134 T 12-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 BAMF_0277 1337678a8e6aa707052814b3d50a4270 317 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 176 182 - T 12-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 BAMF_0277 1337678a8e6aa707052814b3d50a4270 317 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 6 315 47.895 T 12-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 BAMF_0277 1337678a8e6aa707052814b3d50a4270 317 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 316 4.3E-43 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 BAMF_0277 1337678a8e6aa707052814b3d50a4270 317 Gene3D G3DSA:3.40.50.720 1 148 8.1E-59 T 12-10-2018 BAMF_0277 1337678a8e6aa707052814b3d50a4270 317 SUPERFAMILY SSF56327 147 311 2.74E-60 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BAMF_0277 1337678a8e6aa707052814b3d50a4270 317 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 8 146 6.0E-50 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 BAMF_0851 01eb67a6471f355e5817fa76674a62b8 142 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 12 134 2.8E-18 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component BAMF_0851 01eb67a6471f355e5817fa76674a62b8 142 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 10 106 4.1E-5 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component BAMF_3103 9c935620bd12bc3756e51229191ff1fa 61 Pfam PF01381 Helix-turn-helix 10 55 1.4E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_3103 9c935620bd12bc3756e51229191ff1fa 61 SUPERFAMILY SSF47413 4 57 2.56E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_3103 9c935620bd12bc3756e51229191ff1fa 61 Gene3D G3DSA:1.10.260.40 4 60 7.1E-7 T 12-10-2018 BAMF_0499 8f4b75eed5d6f354f5bd4bbeaece3864 403 SUPERFAMILY SSF103473 5 398 2.35E-64 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0499 8f4b75eed5d6f354f5bd4bbeaece3864 403 Pfam PF07690 Major Facilitator Superfamily 19 359 2.5E-43 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0499 8f4b75eed5d6f354f5bd4bbeaece3864 403 Gene3D G3DSA:1.20.1720.10 13 393 8.2E-99 T 12-10-2018 BAMF_0499 8f4b75eed5d6f354f5bd4bbeaece3864 403 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 394 2.4E-140 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 BAMF_2554 e56b186f0fcbcd9ab9326f7fd8d3976e 218 Gene3D G3DSA:1.10.3720.10 11 218 3.2E-47 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2554 e56b186f0fcbcd9ab9326f7fd8d3976e 218 SUPERFAMILY SSF161098 15 203 8.9E-40 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2554 e56b186f0fcbcd9ab9326f7fd8d3976e 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 216 5.9E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_2554 e56b186f0fcbcd9ab9326f7fd8d3976e 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 109 3.7E-28 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BAMF_1491 f65d01e809a201683eb55003c1b897ac 157 Pfam PF00258 Flavodoxin 6 138 1.8E-31 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BAMF_1491 f65d01e809a201683eb55003c1b897ac 157 PRINTS PR00369 Flavodoxin signature 82 92 1.4E-5 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BAMF_1491 f65d01e809a201683eb55003c1b897ac 157 PRINTS PR00369 Flavodoxin signature 5 18 1.4E-5 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BAMF_1491 f65d01e809a201683eb55003c1b897ac 157 PRINTS PR00369 Flavodoxin signature 53 64 1.4E-5 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BAMF_1491 f65d01e809a201683eb55003c1b897ac 157 SUPERFAMILY SSF52218 3 147 2.79E-39 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_1491 f65d01e809a201683eb55003c1b897ac 157 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 BAMF_1491 f65d01e809a201683eb55003c1b897ac 157 TIGRFAM TIGR01753 flav_short: flavodoxin 5 143 3.0E-44 T 12-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 BAMF_1491 f65d01e809a201683eb55003c1b897ac 157 Gene3D G3DSA:3.40.50.360 2 144 1.1E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_3399 2c424a244deaaac4072d082ee713b1f5 446 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 185 1.9E-67 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BAMF_3399 2c424a244deaaac4072d082ee713b1f5 446 SMART SM00984 314 417 3.0E-44 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BAMF_3399 2c424a244deaaac4072d082ee713b1f5 446 Gene3D G3DSA:1.20.5.100 198 229 3.0E-18 T 12-10-2018 BAMF_3399 2c424a244deaaac4072d082ee713b1f5 446 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 2 413 8.8E-139 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BAMF_3399 2c424a244deaaac4072d082ee713b1f5 446 PIRSF PIRSF500134 2 435 1.3E-178 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 BAMF_3399 2c424a244deaaac4072d082ee713b1f5 446 PIRSF PIRSF000124 2 432 3.2E-143 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BAMF_3399 2c424a244deaaac4072d082ee713b1f5 446 Gene3D G3DSA:3.40.50.720 1 197 7.4E-74 T 12-10-2018 BAMF_3399 2c424a244deaaac4072d082ee713b1f5 446 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 314 415 3.8E-31 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BAMF_3399 2c424a244deaaac4072d082ee713b1f5 446 SUPERFAMILY SSF52413 300 427 2.35E-36 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 BAMF_3399 2c424a244deaaac4072d082ee713b1f5 446 Gene3D G3DSA:3.40.50.720 230 445 1.3E-73 T 12-10-2018 BAMF_3399 2c424a244deaaac4072d082ee713b1f5 446 SUPERFAMILY SSF51735 2 194 2.05E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3399 2c424a244deaaac4072d082ee713b1f5 446 SUPERFAMILY SSF48179 199 296 2.38E-33 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_3399 2c424a244deaaac4072d082ee713b1f5 446 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 199 291 4.1E-39 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BAMF_1455 6a6dfd1fd3b636749c5ad64bd00301f8 164 Pfam PF14489 QueF-like protein 61 139 1.2E-35 T 12-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BAMF_1455 6a6dfd1fd3b636749c5ad64bd00301f8 164 Gene3D G3DSA:3.30.1130.10 20 164 1.0E-69 T 12-10-2018 BAMF_1455 6a6dfd1fd3b636749c5ad64bd00301f8 164 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 27 137 5.4E-55 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BAMF_1455 6a6dfd1fd3b636749c5ad64bd00301f8 164 PIRSF PIRSF027377 8 146 1.3E-61 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BAMF_1455 6a6dfd1fd3b636749c5ad64bd00301f8 164 SUPERFAMILY SSF55620 26 135 2.89E-29 T 12-10-2018 BAMF_1455 6a6dfd1fd3b636749c5ad64bd00301f8 164 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 164 72.601 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BAMF_2517 1525d5c0dacdfaf3c779a507874457cb 650 Gene3D G3DSA:1.10.1790.10 293 401 4.0E-21 T 12-10-2018 BAMF_2517 1525d5c0dacdfaf3c779a507874457cb 650 Gene3D G3DSA:3.40.50.2300 411 497 2.1E-11 T 12-10-2018 BAMF_2517 1525d5c0dacdfaf3c779a507874457cb 650 Pfam PF05043 Mga helix-turn-helix domain 103 164 5.2E-7 T 12-10-2018 IPR007737 Mga helix-turn-helix domain BAMF_2517 1525d5c0dacdfaf3c779a507874457cb 650 Pfam PF08279 HTH domain 7 65 5.8E-7 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BAMF_2517 1525d5c0dacdfaf3c779a507874457cb 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 557 573 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain BAMF_2517 1525d5c0dacdfaf3c779a507874457cb 650 SUPERFAMILY SSF63520 301 402 5.36E-21 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BAMF_2517 1525d5c0dacdfaf3c779a507874457cb 650 Gene3D G3DSA:3.40.930.10 510 649 2.6E-30 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BAMF_2517 1525d5c0dacdfaf3c779a507874457cb 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 517 649 6.1E-29 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BAMF_2517 1525d5c0dacdfaf3c779a507874457cb 650 Gene3D G3DSA:1.10.10.10 2 155 2.3E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2517 1525d5c0dacdfaf3c779a507874457cb 650 Gene3D G3DSA:1.10.1790.10 190 288 1.6E-12 T 12-10-2018 BAMF_2517 1525d5c0dacdfaf3c779a507874457cb 650 Pfam PF00874 PRD domain 311 399 3.4E-19 T 12-10-2018 IPR011608 PRD domain GO:0006355 BAMF_2517 1525d5c0dacdfaf3c779a507874457cb 650 Pfam PF00874 PRD domain 199 283 1.4E-14 T 12-10-2018 IPR011608 PRD domain GO:0006355 BAMF_2517 1525d5c0dacdfaf3c779a507874457cb 650 SUPERFAMILY SSF55804 512 649 5.49E-30 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BAMF_2517 1525d5c0dacdfaf3c779a507874457cb 650 SUPERFAMILY SSF63520 193 285 6.54E-16 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BAMF_2517 1525d5c0dacdfaf3c779a507874457cb 650 SUPERFAMILY SSF52794 410 489 4.87E-8 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BAMF_2750 08704afc30bbfeb26cdb681f54f14d2d 401 SUPERFAMILY SSF52402 174 387 4.85E-51 T 12-10-2018 BAMF_2750 08704afc30bbfeb26cdb681f54f14d2d 401 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 401 164.678 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 BAMF_2750 08704afc30bbfeb26cdb681f54f14d2d 401 Gene3D G3DSA:3.40.50.620 175 401 4.1E-72 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_2750 08704afc30bbfeb26cdb681f54f14d2d 401 Pfam PF02926 THUMP domain 30 164 7.6E-27 T 12-10-2018 IPR004114 THUMP domain GO:0003723 BAMF_2750 08704afc30bbfeb26cdb681f54f14d2d 401 SUPERFAMILY SSF143437 3 173 1.2E-53 T 12-10-2018 BAMF_2750 08704afc30bbfeb26cdb681f54f14d2d 401 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 373 1.2E-146 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 BAMF_2750 08704afc30bbfeb26cdb681f54f14d2d 401 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 371 1.1E-66 T 12-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 BAMF_2750 08704afc30bbfeb26cdb681f54f14d2d 401 SMART SM00981 74 165 4.9E-24 T 12-10-2018 IPR004114 THUMP domain GO:0003723 BAMF_2750 08704afc30bbfeb26cdb681f54f14d2d 401 Gene3D G3DSA:3.30.2130.30 1 174 3.7E-59 T 12-10-2018 BAMF_2968 ff1dee5f5235ee453b443bfa7fe905a7 768 SMART SM00387 675 768 0.002 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2968 ff1dee5f5235ee453b443bfa7fe905a7 768 Pfam PF07730 Histidine kinase 568 637 4.3E-13 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BAMF_2968 ff1dee5f5235ee453b443bfa7fe905a7 768 SUPERFAMILY SSF55874 642 763 6.68E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2968 ff1dee5f5235ee453b443bfa7fe905a7 768 Gene3D G3DSA:3.30.565.10 635 768 9.7E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2666 07e1d0784548fa3b1eb56cc778cc27d3 177 Pfam PF02674 Colicin V production protein 2 162 5.9E-33 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 BAMF_2433 5087f93b8ea71ec1407ef99c03ad45d3 93 Pfam PF07873 YabP family 27 90 2.8E-19 T 12-10-2018 IPR022476 Sporulation protein YabP/YqfC BAMF_2433 5087f93b8ea71ec1407ef99c03ad45d3 93 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 8 91 2.5E-37 T 12-10-2018 IPR022477 Sporulation protein YqfC BAMF_0361 5577e75314b0e1abde528d4c8fde76a8 261 Gene3D G3DSA:3.40.50.720 1 261 2.3E-88 T 12-10-2018 BAMF_0361 5577e75314b0e1abde528d4c8fde76a8 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_0361 5577e75314b0e1abde528d4c8fde76a8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.0E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0361 5577e75314b0e1abde528d4c8fde76a8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.0E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0361 5577e75314b0e1abde528d4c8fde76a8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.0E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0361 5577e75314b0e1abde528d4c8fde76a8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.0E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0361 5577e75314b0e1abde528d4c8fde76a8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.0E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0361 5577e75314b0e1abde528d4c8fde76a8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.0E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0361 5577e75314b0e1abde528d4c8fde76a8 261 SUPERFAMILY SSF51735 6 252 1.05E-82 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0361 5577e75314b0e1abde528d4c8fde76a8 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.7E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0361 5577e75314b0e1abde528d4c8fde76a8 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.7E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0361 5577e75314b0e1abde528d4c8fde76a8 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.7E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0361 5577e75314b0e1abde528d4c8fde76a8 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 2.7E-67 T 12-10-2018 BAMF_2160 a2855fb2b85b0d8c2e4e2c5ccfc44d7d 434 SMART SM00028 351 384 47.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2160 a2855fb2b85b0d8c2e4e2c5ccfc44d7d 434 SMART SM00028 182 215 2.4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2160 a2855fb2b85b0d8c2e4e2c5ccfc44d7d 434 SMART SM00028 249 282 38.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2160 a2855fb2b85b0d8c2e4e2c5ccfc44d7d 434 SMART SM00028 283 316 45.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2160 a2855fb2b85b0d8c2e4e2c5ccfc44d7d 434 SMART SM00028 385 418 170.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2160 a2855fb2b85b0d8c2e4e2c5ccfc44d7d 434 SMART SM00028 146 179 87.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2160 a2855fb2b85b0d8c2e4e2c5ccfc44d7d 434 Pfam PF13429 Tetratricopeptide repeat 249 412 7.3E-9 T 12-10-2018 BAMF_2160 a2855fb2b85b0d8c2e4e2c5ccfc44d7d 434 Pfam PF14559 Tetratricopeptide repeat 58 120 3.8E-6 T 12-10-2018 BAMF_2160 a2855fb2b85b0d8c2e4e2c5ccfc44d7d 434 SUPERFAMILY SSF48452 216 418 2.02E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_2160 a2855fb2b85b0d8c2e4e2c5ccfc44d7d 434 Pfam PF13432 Tetratricopeptide repeat 150 210 0.0014 T 12-10-2018 BAMF_2160 a2855fb2b85b0d8c2e4e2c5ccfc44d7d 434 Gene3D G3DSA:1.25.40.10 266 419 1.1E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_2160 a2855fb2b85b0d8c2e4e2c5ccfc44d7d 434 Gene3D G3DSA:1.25.40.10 3 265 6.0E-29 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_2160 a2855fb2b85b0d8c2e4e2c5ccfc44d7d 434 SUPERFAMILY SSF48452 50 210 2.53E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_1133 073f110cd0133ed08b0174b1b1c381f7 237 Pfam PF15493 Domain of unknown function, YrpD 37 235 3.7E-83 T 12-10-2018 IPR029143 Protein of unknown function, YrpD BAMF_1133 073f110cd0133ed08b0174b1b1c381f7 237 Gene3D G3DSA:2.60.120.1270 29 237 2.4E-78 T 12-10-2018 IPR038682 YrpD-like superfamily BAMF_1736 550155d25ebd8710ed3c0039f0f58457 92 Gene3D G3DSA:3.30.70.1120 1 92 1.8E-24 T 12-10-2018 IPR036746 TT1725-like superfamily BAMF_1736 550155d25ebd8710ed3c0039f0f58457 92 SUPERFAMILY SSF103007 3 92 1.83E-31 T 12-10-2018 IPR036746 TT1725-like superfamily BAMF_1736 550155d25ebd8710ed3c0039f0f58457 92 Pfam PF04456 Protein of unknown function (DUF503) 2 87 4.2E-31 T 12-10-2018 IPR007546 Protein of unknown function DUF503 BAMF_2179 f24564b871e8715c94a5c8a30c5dc2ed 190 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 65 81 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BAMF_2179 f24564b871e8715c94a5c8a30c5dc2ed 190 Gene3D G3DSA:3.30.1130.10 55 189 2.4E-60 T 12-10-2018 BAMF_2179 f24564b871e8715c94a5c8a30c5dc2ed 190 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 114 124 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BAMF_2179 f24564b871e8715c94a5c8a30c5dc2ed 190 Gene3D G3DSA:1.10.286.10 1 54 6.5E-26 T 12-10-2018 BAMF_2179 f24564b871e8715c94a5c8a30c5dc2ed 190 SUPERFAMILY SSF55620 3 187 7.26E-80 T 12-10-2018 BAMF_2179 f24564b871e8715c94a5c8a30c5dc2ed 190 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 5 187 42.891 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BAMF_2179 f24564b871e8715c94a5c8a30c5dc2ed 190 Pfam PF01227 GTP cyclohydrolase I 9 186 8.0E-82 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BAMF_2179 f24564b871e8715c94a5c8a30c5dc2ed 190 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 9 188 5.7E-85 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BAMF_3109 43de57b57cc7181fadcdb84bb53b7326 437 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 152 428 1.5E-74 T 12-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 BAMF_3109 43de57b57cc7181fadcdb84bb53b7326 437 Pfam PF01458 Uncharacterized protein family (UPF0051) 186 411 4.2E-62 T 12-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 BAMF_3109 43de57b57cc7181fadcdb84bb53b7326 437 SUPERFAMILY SSF101960 12 436 2.22E-118 T 12-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BAMF_1065 e349c0228ec7f9c383493eb6e67e4dc1 673 SUPERFAMILY SSF90123 3 416 3.92E-73 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_1065 e349c0228ec7f9c383493eb6e67e4dc1 673 Gene3D G3DSA:1.20.1560.10 1 58 3.7E-5 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_1065 e349c0228ec7f9c383493eb6e67e4dc1 673 SUPERFAMILY SSF52540 421 665 4.67E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1065 e349c0228ec7f9c383493eb6e67e4dc1 673 Gene3D G3DSA:3.40.50.300 426 672 1.2E-87 T 12-10-2018 BAMF_1065 e349c0228ec7f9c383493eb6e67e4dc1 673 Pfam PF00005 ABC transporter 446 595 2.5E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1065 e349c0228ec7f9c383493eb6e67e4dc1 673 ProSitePatterns PS00211 ABC transporters family signature. 567 581 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_1065 e349c0228ec7f9c383493eb6e67e4dc1 673 Gene3D G3DSA:1.20.1560.10 134 414 2.2E-67 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_1065 e349c0228ec7f9c383493eb6e67e4dc1 673 Pfam PF00664 ABC transporter transmembrane region 152 386 2.3E-40 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BAMF_1065 e349c0228ec7f9c383493eb6e67e4dc1 673 SMART SM00382 455 641 4.4E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1068 015f229746d7865f2d371121af6d8a29 117 PIRSF PIRSF037692 50 117 8.6E-32 T 12-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 BAMF_1068 015f229746d7865f2d371121af6d8a29 117 Pfam PF17277 Family of unknown function (DUF5342) 50 117 3.0E-29 T 12-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 BAMF_1068 015f229746d7865f2d371121af6d8a29 117 ProDom PD056348 YHEE BH1143 50 117 2.0E-25 T 12-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 BAMF_1661 374cda7ca166354cfc35fbe5b95b7de6 332 SUPERFAMILY SSF53659 1 327 4.52E-107 T 12-10-2018 BAMF_1661 374cda7ca166354cfc35fbe5b95b7de6 332 Gene3D G3DSA:3.40.718.10 1 332 3.4E-146 T 12-10-2018 BAMF_1661 374cda7ca166354cfc35fbe5b95b7de6 332 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 329 2.0E-146 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 BAMF_1661 374cda7ca166354cfc35fbe5b95b7de6 332 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 332 152.95 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 BAMF_1661 374cda7ca166354cfc35fbe5b95b7de6 332 Pfam PF02504 Fatty acid synthesis protein 1 318 6.2E-132 T 12-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 BAMF_1661 374cda7ca166354cfc35fbe5b95b7de6 332 PIRSF PIRSF002465 1 332 2.3E-130 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 BAMF_0962 80b24b8048f930bffe7e739c7a93a1b0 85 Pfam PF06946 Bacteriophage A118-like holin, Hol118 3 80 2.8E-11 T 12-10-2018 IPR009708 Bacteriophage A118, holin BAMF_2614 749f3731fe1bcf12074ba89ead3c00f9 430 Gene3D G3DSA:3.40.1190.10 3 300 6.5E-101 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BAMF_2614 749f3731fe1bcf12074ba89ead3c00f9 430 SUPERFAMILY SSF53244 301 429 8.79E-27 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BAMF_2614 749f3731fe1bcf12074ba89ead3c00f9 430 Pfam PF08245 Mur ligase middle domain 46 274 2.2E-15 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BAMF_2614 749f3731fe1bcf12074ba89ead3c00f9 430 Gene3D G3DSA:3.90.190.20 301 430 8.2E-31 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BAMF_2614 749f3731fe1bcf12074ba89ead3c00f9 430 SUPERFAMILY SSF53623 3 299 4.35E-93 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BAMF_2614 749f3731fe1bcf12074ba89ead3c00f9 430 Pfam PF02875 Mur ligase family, glutamate ligase domain 299 378 2.5E-11 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BAMF_2614 749f3731fe1bcf12074ba89ead3c00f9 430 PIRSF PIRSF001563 1 430 1.9E-158 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 BAMF_2614 749f3731fe1bcf12074ba89ead3c00f9 430 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 44 67 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 BAMF_2614 749f3731fe1bcf12074ba89ead3c00f9 430 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 143 158 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 BAMF_2614 749f3731fe1bcf12074ba89ead3c00f9 430 TIGRFAM TIGR01499 folC: bifunctional protein FolC 25 428 1.6E-131 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 BAMF_0668 ef3c5ad3c5163090f206bff4048211d4 458 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 440 450 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site BAMF_0668 ef3c5ad3c5163090f206bff4048211d4 458 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 20 450 2.4E-213 T 12-10-2018 BAMF_0668 ef3c5ad3c5163090f206bff4048211d4 458 SUPERFAMILY SSF50249 2 64 2.17E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_0668 ef3c5ad3c5163090f206bff4048211d4 458 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 281 455 4.3E-20 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 BAMF_0668 ef3c5ad3c5163090f206bff4048211d4 458 SUPERFAMILY SSF53335 72 456 8.37E-96 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_0668 ef3c5ad3c5163090f206bff4048211d4 458 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 388 419 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site BAMF_0668 ef3c5ad3c5163090f206bff4048211d4 458 Gene3D G3DSA:2.40.50.140 1 83 3.0E-23 T 12-10-2018 BAMF_0668 ef3c5ad3c5163090f206bff4048211d4 458 Gene3D G3DSA:3.40.1350.30 134 289 4.8E-129 T 12-10-2018 BAMF_0668 ef3c5ad3c5163090f206bff4048211d4 458 Gene3D G3DSA:3.40.50.150 85 452 4.8E-129 T 12-10-2018 BAMF_0668 ef3c5ad3c5163090f206bff4048211d4 458 Pfam PF01938 TRAM domain 8 63 8.2E-13 T 12-10-2018 IPR002792 TRAM domain BAMF_1672 ad41df0e9ea0551335be0084bfadddf1 128 Pfam PF11068 YlqD protein 1 126 2.9E-36 T 12-10-2018 IPR021297 YlqD protein BAMF_1707 631522514e20fd053916260e264a277b 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 2.0E-26 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BAMF_1707 631522514e20fd053916260e264a277b 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 81 93 2.0E-26 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BAMF_1707 631522514e20fd053916260e264a277b 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 211 221 2.0E-26 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BAMF_1707 631522514e20fd053916260e264a277b 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 21 30 2.0E-26 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BAMF_1707 631522514e20fd053916260e264a277b 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 93 107 2.0E-26 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BAMF_1707 631522514e20fd053916260e264a277b 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 121 133 2.0E-26 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BAMF_1707 631522514e20fd053916260e264a277b 221 Pfam PF00813 FliP family 25 217 3.7E-82 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BAMF_1707 631522514e20fd053916260e264a277b 221 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 150 165 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BAMF_1707 631522514e20fd053916260e264a277b 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 23 42 1.9E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BAMF_1707 631522514e20fd053916260e264a277b 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 171 192 1.9E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BAMF_1707 631522514e20fd053916260e264a277b 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 150 170 1.9E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BAMF_1707 631522514e20fd053916260e264a277b 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 62 81 1.9E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BAMF_1707 631522514e20fd053916260e264a277b 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 42 62 1.9E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BAMF_1707 631522514e20fd053916260e264a277b 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 195 220 1.9E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BAMF_1707 631522514e20fd053916260e264a277b 221 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 198 210 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BAMF_1707 631522514e20fd053916260e264a277b 221 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 25 221 2.5E-94 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BAMF_0654 1b6c47dc62cd3a3685c11288b1463855 526 SUPERFAMILY SSF51395 7 518 4.45E-107 T 12-10-2018 BAMF_0654 1b6c47dc62cd3a3685c11288b1463855 526 PIRSF PIRSF500060 1 526 2.5E-217 T 12-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria BAMF_0654 1b6c47dc62cd3a3685c11288b1463855 526 Pfam PF01645 Conserved region in glutamate synthase 116 493 4.6E-118 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 BAMF_0654 1b6c47dc62cd3a3685c11288b1463855 526 PIRSF PIRSF006429 1 526 1.0E-165 T 12-10-2018 IPR024188 Glutamate synthase large subunit-like protein BAMF_0654 1b6c47dc62cd3a3685c11288b1463855 526 Gene3D G3DSA:3.20.20.70 131 520 6.2E-99 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_3552 92584b03ea460c75d0ec6f789584bfaa 535 Hamap MF_01227 CTP synthase [pyrG]. 2 532 53.187 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BAMF_3552 92584b03ea460c75d0ec6f789584bfaa 535 SUPERFAMILY SSF52540 1 271 1.74E-127 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3552 92584b03ea460c75d0ec6f789584bfaa 535 SUPERFAMILY SSF52317 290 532 3.16E-85 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_3552 92584b03ea460c75d0ec6f789584bfaa 535 TIGRFAM TIGR00337 PyrG: CTP synthase 1 527 1.1E-270 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BAMF_3552 92584b03ea460c75d0ec6f789584bfaa 535 Pfam PF06418 CTP synthase N-terminus 3 267 1.2E-130 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BAMF_3552 92584b03ea460c75d0ec6f789584bfaa 535 Gene3D G3DSA:3.40.50.880 287 535 1.1E-104 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_3552 92584b03ea460c75d0ec6f789584bfaa 535 Pfam PF00117 Glutamine amidotransferase class-I 302 525 2.5E-60 T 12-10-2018 IPR017926 Glutamine amidotransferase BAMF_3552 92584b03ea460c75d0ec6f789584bfaa 535 Gene3D G3DSA:3.40.50.300 1 286 2.3E-136 T 12-10-2018 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 Pfam PF01627 Hpt domain 3 96 1.3E-20 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 SMART SM01231 290 350 3.3E-16 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 SMART SM00073 1 98 9.8E-42 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 Pfam PF07194 P2 response regulator binding domain 167 244 5.3E-26 T 12-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 SUPERFAMILY SSF55052 163 244 3.66E-24 T 12-10-2018 IPR035891 CheY-binding domain of CheA BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 Pfam PF01584 CheW-like domain 543 669 2.1E-27 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 Gene3D G3DSA:1.10.287.560 290 350 4.5E-19 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 290 349 2.4E-12 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 Gene3D G3DSA:2.30.30.40 538 664 3.7E-39 T 12-10-2018 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 Gene3D G3DSA:2.40.50.180 561 624 3.7E-39 T 12-10-2018 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 SUPERFAMILY SSF47226 1 110 2.22E-33 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 Gene3D G3DSA:3.30.70.1110 163 246 1.3E-28 T 12-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 SMART SM00260 530 669 9.4E-48 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 SUPERFAMILY SSF50341 537 669 5.49E-33 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 Gene3D G3DSA:1.20.120.160 1 144 3.8E-40 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 454 3.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 492 3.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 535 3.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 3.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 398 537 6.5E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 SUPERFAMILY SSF47384 291 351 6.28E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 SUPERFAMILY SSF55874 352 536 1.23E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 SMART SM00387 395 538 1.5E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1715 6672a69056e14c90e70ce7f404f41b5a 670 Gene3D G3DSA:3.30.565.10 351 537 1.0E-59 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2708 411709fcfecb231ddb01425799e7035c 280 PRINTS PR00069 Aldo-keto reductase signature 40 64 1.2E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2708 411709fcfecb231ddb01425799e7035c 280 PRINTS PR00069 Aldo-keto reductase signature 130 147 1.2E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2708 411709fcfecb231ddb01425799e7035c 280 PRINTS PR00069 Aldo-keto reductase signature 164 193 1.2E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2708 411709fcfecb231ddb01425799e7035c 280 PRINTS PR00069 Aldo-keto reductase signature 201 225 1.2E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2708 411709fcfecb231ddb01425799e7035c 280 PRINTS PR00069 Aldo-keto reductase signature 100 118 1.2E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2708 411709fcfecb231ddb01425799e7035c 280 Gene3D G3DSA:3.20.20.100 1 280 1.9E-128 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_2708 411709fcfecb231ddb01425799e7035c 280 SUPERFAMILY SSF51430 8 274 7.99E-95 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_2708 411709fcfecb231ddb01425799e7035c 280 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 44 61 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BAMF_2708 411709fcfecb231ddb01425799e7035c 280 PIRSF PIRSF000097 2 124 6.4E-40 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2708 411709fcfecb231ddb01425799e7035c 280 PIRSF PIRSF000097 120 276 6.2E-53 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2708 411709fcfecb231ddb01425799e7035c 280 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 130 147 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BAMF_2708 411709fcfecb231ddb01425799e7035c 280 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 234 249 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BAMF_2708 411709fcfecb231ddb01425799e7035c 280 Pfam PF00248 Aldo/keto reductase family 31 266 1.3E-50 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain BAMF_3735 740a927fd7d8fba7a27bc075cb4643ad 475 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 4 473 73.108 T 12-10-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 BAMF_3735 740a927fd7d8fba7a27bc075cb4643ad 475 SMART SM00490 254 335 1.2E-33 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_3735 740a927fd7d8fba7a27bc075cb4643ad 475 Pfam PF00271 Helicase conserved C-terminal domain 229 335 1.8E-28 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_3735 740a927fd7d8fba7a27bc075cb4643ad 475 SMART SM00487 21 218 4.0E-62 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_3735 740a927fd7d8fba7a27bc075cb4643ad 475 Pfam PF03880 DbpA RNA binding domain 405 472 1.4E-18 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BAMF_3735 740a927fd7d8fba7a27bc075cb4643ad 475 Gene3D G3DSA:3.40.50.300 2 207 1.3E-71 T 12-10-2018 BAMF_3735 740a927fd7d8fba7a27bc075cb4643ad 475 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BAMF_3735 740a927fd7d8fba7a27bc075cb4643ad 475 Pfam PF00270 DEAD/DEAH box helicase 26 192 4.3E-47 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BAMF_3735 740a927fd7d8fba7a27bc075cb4643ad 475 Gene3D G3DSA:3.40.50.300 209 381 2.1E-51 T 12-10-2018 BAMF_3735 740a927fd7d8fba7a27bc075cb4643ad 475 SUPERFAMILY SSF52540 69 354 2.43E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3735 740a927fd7d8fba7a27bc075cb4643ad 475 Gene3D G3DSA:3.30.70.330 404 474 2.4E-26 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 Gene3D G3DSA:3.90.650.10 35 362 7.4E-135 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 SUPERFAMILY SSF56042 573 738 1.64E-35 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 24 737 0.0 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 Pfam PF02769 AIR synthase related protein, C-terminal domain 576 710 3.5E-14 T 12-10-2018 IPR010918 PurM-like, C-terminal domain BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 359 1.0E-31 T 12-10-2018 IPR010918 PurM-like, C-terminal domain BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 SUPERFAMILY SSF55326 399 569 4.32E-57 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 SUPERFAMILY SSF56042 204 430 5.68E-56 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 Pfam PF00586 AIR synthase related protein, N-terminal domain 445 562 1.1E-25 T 12-10-2018 IPR016188 PurM-like, N-terminal domain BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 Pfam PF00586 AIR synthase related protein, N-terminal domain 89 194 2.5E-25 T 12-10-2018 IPR016188 PurM-like, N-terminal domain BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 PIRSF PIRSF001587 8 741 0.0 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 SUPERFAMILY SSF55326 42 200 9.68E-52 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 742 328.934 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 Gene3D G3DSA:3.30.1330.10 49 198 7.4E-135 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 Gene3D G3DSA:3.30.1330.10 389 565 1.2E-63 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 Gene3D G3DSA:3.90.650.10 570 740 1.2E-38 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BAMF_0642 1ecfea17f5d940c7f0b1dc568d379287 742 SUPERFAMILY SSF109736 5 58 3.79E-13 T 12-10-2018 BAMF_3395 27d8b01592815d2e59965f831778b7d3 398 Gene3D G3DSA:3.40.50.2000 135 207 6.6E-6 T 12-10-2018 BAMF_3395 27d8b01592815d2e59965f831778b7d3 398 Pfam PF13692 Glycosyl transferases group 1 220 358 7.3E-12 T 12-10-2018 BAMF_3395 27d8b01592815d2e59965f831778b7d3 398 Gene3D G3DSA:3.40.50.2000 208 364 4.4E-30 T 12-10-2018 BAMF_3395 27d8b01592815d2e59965f831778b7d3 398 SUPERFAMILY SSF53756 103 382 3.51E-27 T 12-10-2018 BAMF_2763 4c830b44779e20362341f93e5aba7fa3 268 SUPERFAMILY SSF46785 2 85 7.75E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2763 4c830b44779e20362341f93e5aba7fa3 268 Gene3D G3DSA:1.10.10.10 1 72 2.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2763 4c830b44779e20362341f93e5aba7fa3 268 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 8 72 1.4E-22 T 12-10-2018 IPR002831 Transcription regulator TrmB, N-terminal BAMF_3773 c43f92eed0195df52f345f4c627df260 320 Pfam PF01497 Periplasmic binding protein 72 285 2.8E-29 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BAMF_3773 c43f92eed0195df52f345f4c627df260 320 Gene3D G3DSA:3.40.50.1980 37 150 2.7E-23 T 12-10-2018 BAMF_3773 c43f92eed0195df52f345f4c627df260 320 Gene3D G3DSA:3.40.50.1980 151 316 1.0E-54 T 12-10-2018 BAMF_3773 c43f92eed0195df52f345f4c627df260 320 SUPERFAMILY SSF53807 38 304 5.1E-53 T 12-10-2018 BAMF_0723 821398917c992f536fe279e1327f4b1e 358 Gene3D G3DSA:3.40.50.2300 1 129 5.0E-29 T 12-10-2018 BAMF_0723 821398917c992f536fe279e1327f4b1e 358 SUPERFAMILY SSF46894 138 228 2.01E-11 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_0723 821398917c992f536fe279e1327f4b1e 358 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 226 4.9E-7 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_0723 821398917c992f536fe279e1327f4b1e 358 Pfam PF00072 Response regulator receiver domain 4 112 8.3E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0723 821398917c992f536fe279e1327f4b1e 358 Gene3D G3DSA:1.10.10.10 150 232 2.8E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0723 821398917c992f536fe279e1327f4b1e 358 SUPERFAMILY SSF52172 2 119 1.25E-26 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_0723 821398917c992f536fe279e1327f4b1e 358 SMART SM00448 1 112 2.7E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_1679 3c91a7e83a83d29c7bc01b385839f1ed 93 Gene3D G3DSA:3.40.1690.10 7 87 1.6E-26 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BAMF_1679 3c91a7e83a83d29c7bc01b385839f1ed 93 SUPERFAMILY SSF160544 9 86 5.1E-24 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BAMF_1679 3c91a7e83a83d29c7bc01b385839f1ed 93 TIGRFAM TIGR00789 flhB_rel: FlhB domain protein 8 88 7.3E-38 T 12-10-2018 IPR004683 Type III secretion system substrate exporter FlhB-like BAMF_1679 3c91a7e83a83d29c7bc01b385839f1ed 93 Pfam PF01312 FlhB HrpN YscU SpaS Family 10 82 1.8E-19 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BAMF_0278 cd18fc07ec808a86003dcf73d2291781 510 Pfam PF07690 Major Facilitator Superfamily 18 409 4.6E-57 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0278 cd18fc07ec808a86003dcf73d2291781 510 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 493 7.5E-88 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BAMF_0278 cd18fc07ec808a86003dcf73d2291781 510 Gene3D G3DSA:1.20.1720.10 14 220 5.2E-57 T 12-10-2018 BAMF_0278 cd18fc07ec808a86003dcf73d2291781 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 302 326 6.4E-5 T 12-10-2018 BAMF_0278 cd18fc07ec808a86003dcf73d2291781 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 76 98 6.4E-5 T 12-10-2018 BAMF_0278 cd18fc07ec808a86003dcf73d2291781 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 6.4E-5 T 12-10-2018 BAMF_0278 cd18fc07ec808a86003dcf73d2291781 510 SUPERFAMILY SSF103473 12 502 6.54E-77 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_2487 c9837c5b9e4bd49e88f969f8f2e28255 210 Pfam PF01965 DJ-1/PfpI family 4 176 2.0E-33 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BAMF_2487 c9837c5b9e4bd49e88f969f8f2e28255 210 SUPERFAMILY SSF52317 4 178 2.52E-29 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_2487 c9837c5b9e4bd49e88f969f8f2e28255 210 Gene3D G3DSA:3.40.50.880 1 210 1.2E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_2605 168d308a52035f4144f91e62665dc764 267 Gene3D G3DSA:3.40.50.300 3 255 1.2E-66 T 12-10-2018 BAMF_2605 168d308a52035f4144f91e62665dc764 267 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 219 4.6E-24 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BAMF_2605 168d308a52035f4144f91e62665dc764 267 PIRSF PIRSF003092 1 267 3.9E-94 T 12-10-2018 IPR025501 ATP binding protein MinD BAMF_2605 168d308a52035f4144f91e62665dc764 267 SUPERFAMILY SSF52540 5 262 2.09E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2605 168d308a52035f4144f91e62665dc764 267 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 263 3.9E-126 T 12-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 BAMF_3689 42bcc555968c09120001e11934ca175b 452 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 435 2.6E-205 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 BAMF_3689 42bcc555968c09120001e11934ca175b 452 Pfam PF02378 Phosphotransferase system, EIIC 29 359 6.3E-80 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BAMF_3689 42bcc555968c09120001e11934ca175b 452 PIRSF PIRSF006351 1 444 2.2E-157 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 BAMF_3689 42bcc555968c09120001e11934ca175b 452 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 435 2.6E-205 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 BAMF_0545 05fac9b1fc8b02d5d4c43c39dfa60cae 256 SMART SM01040 13 99 3.6E-8 T 12-10-2018 IPR003497 BRO N-terminal domain BAMF_0545 05fac9b1fc8b02d5d4c43c39dfa60cae 256 Pfam PF02498 BRO family, N-terminal domain 18 99 1.8E-7 T 12-10-2018 IPR003497 BRO N-terminal domain BAMF_0545 05fac9b1fc8b02d5d4c43c39dfa60cae 256 Pfam PF03374 Phage antirepressor protein KilAC domain 142 250 1.1E-30 T 12-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 BAMF_3767 c6168ce9b723dc0cf6a19b2d06b14ba2 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 12-10-2018 BAMF_3767 c6168ce9b723dc0cf6a19b2d06b14ba2 270 SUPERFAMILY SSF56784 1 269 3.9E-77 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_3767 c6168ce9b723dc0cf6a19b2d06b14ba2 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 263 9.0E-70 T 12-10-2018 BAMF_3767 c6168ce9b723dc0cf6a19b2d06b14ba2 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 236 1.7E-27 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BAMF_3767 c6168ce9b723dc0cf6a19b2d06b14ba2 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 12-10-2018 BAMF_3767 c6168ce9b723dc0cf6a19b2d06b14ba2 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 263 2.1E-68 T 12-10-2018 IPR000150 Cof family GO:0016787 BAMF_3767 c6168ce9b723dc0cf6a19b2d06b14ba2 270 Gene3D G3DSA:3.30.1240.10 86 192 5.6E-91 T 12-10-2018 BAMF_3767 c6168ce9b723dc0cf6a19b2d06b14ba2 270 Gene3D G3DSA:3.40.50.1000 3 264 5.6E-91 T 12-10-2018 IPR023214 HAD superfamily BAMF_2964 1f43c2d10c0fdcaf10e19e775c08dfcd 94 PIRSF PIRSF028784 1 92 2.2E-33 T 12-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 BAMF_2964 1f43c2d10c0fdcaf10e19e775c08dfcd 94 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 83 1.5E-19 T 12-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 BAMF_2383 321fe4f2f555f87c75103bb3e8f82660 104 SUPERFAMILY SSF89957 1 103 7.33E-32 T 12-10-2018 IPR029756 MTH1187/YkoF-like BAMF_2383 321fe4f2f555f87c75103bb3e8f82660 104 Pfam PF01910 Thiamine-binding protein 4 98 1.2E-33 T 12-10-2018 IPR002767 Thiamine-binding protein BAMF_2383 321fe4f2f555f87c75103bb3e8f82660 104 Gene3D G3DSA:3.30.70.930 1 104 2.7E-39 T 12-10-2018 IPR029756 MTH1187/YkoF-like BAMF_2383 321fe4f2f555f87c75103bb3e8f82660 104 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 2 101 1.1E-37 T 12-10-2018 IPR002767 Thiamine-binding protein BAMF_2324 0181dc8875ddf006a89530461f401ce1 70 Pfam PF10676 Spore germination protein gerPA/gerPF 5 67 6.4E-17 T 12-10-2018 IPR019618 Spore germination protein GerPA/GerPF BAMF_0920 6c144e711174b6e0ec36621c09daa515 190 SUPERFAMILY SSF52540 2 186 6.78E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0920 6c144e711174b6e0ec36621c09daa515 190 Gene3D G3DSA:3.40.50.300 1 189 1.4E-33 T 12-10-2018 BAMF_0938 d3a716d33a0ded46d6366f923ddf660f 564 Gene3D G3DSA:3.40.50.300 13 258 7.8E-7 T 12-10-2018 BAMF_1397 7746d6ec84881bc5cdb66869682bc42b 415 Gene3D G3DSA:3.40.309.10 224 372 1.4E-159 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BAMF_1397 7746d6ec84881bc5cdb66869682bc42b 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 404 3.3E-178 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BAMF_1397 7746d6ec84881bc5cdb66869682bc42b 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 40.529 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BAMF_1397 7746d6ec84881bc5cdb66869682bc42b 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 12-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BAMF_1397 7746d6ec84881bc5cdb66869682bc42b 415 SUPERFAMILY SSF53720 2 414 1.44E-109 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BAMF_1397 7746d6ec84881bc5cdb66869682bc42b 415 PIRSF PIRSF000151 1 415 7.5E-173 T 12-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BAMF_1397 7746d6ec84881bc5cdb66869682bc42b 415 Gene3D G3DSA:3.40.605.10 17 409 1.4E-159 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BAMF_1397 7746d6ec84881bc5cdb66869682bc42b 415 Pfam PF00171 Aldehyde dehydrogenase family 9 281 1.0E-12 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BAMF_2066 705294463b75d2c1aaac77c9f5628ac4 384 SUPERFAMILY SSF51395 22 379 9.16E-96 T 12-10-2018 BAMF_2066 705294463b75d2c1aaac77c9f5628ac4 384 PIRSF PIRSF000138 2 384 8.9E-128 T 12-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 BAMF_2066 705294463b75d2c1aaac77c9f5628ac4 384 Pfam PF01070 FMN-dependent dehydrogenase 30 380 4.1E-127 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 BAMF_2066 705294463b75d2c1aaac77c9f5628ac4 384 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 277 283 - T 12-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 BAMF_2066 705294463b75d2c1aaac77c9f5628ac4 384 Gene3D G3DSA:3.20.20.70 21 383 1.3E-134 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_1220 94febc8372190239c3f5f6137d320d7e 305 SUPERFAMILY SSF52540 5 250 1.1E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1220 94febc8372190239c3f5f6137d320d7e 305 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 280 3.0E-9 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BAMF_1220 94febc8372190239c3f5f6137d320d7e 305 SMART SM00382 34 228 8.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1220 94febc8372190239c3f5f6137d320d7e 305 Pfam PF00005 ABC transporter 26 178 3.6E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1220 94febc8372190239c3f5f6137d320d7e 305 Gene3D G3DSA:3.40.50.300 3 304 2.8E-92 T 12-10-2018 BAMF_1220 94febc8372190239c3f5f6137d320d7e 305 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3385 7c16b9e9a6d1d30e961df051e0abaeb3 139 TIGRFAM TIGR03826 YvyF: flagellar operon protein TIGR03826 3 138 8.8E-55 T 12-10-2018 IPR022258 Flagellar operon protein YvyF BAMF_0600 8aa5549cc6bd0bd6dfc57d3078a49fb3 87 ProDom PD008023 HOLIN TRANSMEMBRANE MEMBRANE PROPHAGE FAMILY BHLB SPP1 5'REGION HOLIN ORF050 5 87 7.0E-31 T 12-10-2018 IPR006479 Holin BAMF_0600 8aa5549cc6bd0bd6dfc57d3078a49fb3 87 Pfam PF04688 SPP1 phage holin 3 82 3.9E-30 T 12-10-2018 IPR006479 Holin BAMF_0600 8aa5549cc6bd0bd6dfc57d3078a49fb3 87 TIGRFAM TIGR01592 holin_SPP1: holin, SPP1 family 5 84 8.8E-32 T 12-10-2018 IPR006479 Holin BAMF_3396 df43d11b901ab2ee88896890284cae40 252 Pfam PF00535 Glycosyl transferase family 2 9 123 2.3E-39 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BAMF_3396 df43d11b901ab2ee88896890284cae40 252 SUPERFAMILY SSF53448 6 226 1.54E-59 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3396 df43d11b901ab2ee88896890284cae40 252 Gene3D G3DSA:3.90.550.10 1 249 2.5E-62 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0540 101d770f37e6f5d759e307364cbc25d3 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BAMF_0540 101d770f37e6f5d759e307364cbc25d3 544 SUPERFAMILY SSF48592 5 518 6.33E-81 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily BAMF_0540 101d770f37e6f5d759e307364cbc25d3 544 SUPERFAMILY SSF54849 136 204 3.89E-27 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BAMF_0540 101d770f37e6f5d759e307364cbc25d3 544 PRINTS PR00298 60kDa chaperonin signature 82 109 3.0E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BAMF_0540 101d770f37e6f5d759e307364cbc25d3 544 PRINTS PR00298 60kDa chaperonin signature 26 52 3.0E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BAMF_0540 101d770f37e6f5d759e307364cbc25d3 544 PRINTS PR00298 60kDa chaperonin signature 266 289 3.0E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BAMF_0540 101d770f37e6f5d759e307364cbc25d3 544 PRINTS PR00298 60kDa chaperonin signature 348 373 3.0E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BAMF_0540 101d770f37e6f5d759e307364cbc25d3 544 PRINTS PR00298 60kDa chaperonin signature 396 417 3.0E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BAMF_0540 101d770f37e6f5d759e307364cbc25d3 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 6.6E-105 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 BAMF_0540 101d770f37e6f5d759e307364cbc25d3 544 SUPERFAMILY SSF52029 183 374 1.18E-84 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily BAMF_0540 101d770f37e6f5d759e307364cbc25d3 544 Gene3D G3DSA:3.50.7.10 190 370 2.1E-236 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily BAMF_0540 101d770f37e6f5d759e307364cbc25d3 544 Hamap MF_00600 60 kDa chaperonin [groL]. 1 543 42.599 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BAMF_0540 101d770f37e6f5d759e307364cbc25d3 544 Gene3D G3DSA:1.10.560.10 7 518 2.1E-236 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily BAMF_0540 101d770f37e6f5d759e307364cbc25d3 544 Gene3D G3DSA:3.30.260.10 135 408 2.1E-236 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BAMF_0540 101d770f37e6f5d759e307364cbc25d3 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 1.5E-259 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BAMF_1447 f8816a9d660893e6c203cb336b35deb9 267 Gene3D G3DSA:3.30.1330.60 83 267 3.4E-44 T 12-10-2018 IPR036737 OmpA-like domain superfamily BAMF_1447 f8816a9d660893e6c203cb336b35deb9 267 SUPERFAMILY SSF103088 137 258 5.49E-28 T 12-10-2018 IPR036737 OmpA-like domain superfamily BAMF_1447 f8816a9d660893e6c203cb336b35deb9 267 Pfam PF00691 OmpA family 150 250 1.2E-14 T 12-10-2018 IPR006665 OmpA-like domain BAMF_1447 f8816a9d660893e6c203cb336b35deb9 267 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 58 5.0E-22 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain BAMF_1888 d36db5015ac33988b34e6f1d53b6047e 41 Pfam PF13040 Fur-regulated basic protein B 2 40 1.4E-15 T 12-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS BAMF_2610 cbddf2c7ae19c8cf8b63e9722d6e43a1 231 Gene3D G3DSA:3.40.140.10 107 231 2.1E-47 T 12-10-2018 BAMF_2610 cbddf2c7ae19c8cf8b63e9722d6e43a1 231 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 180 185 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site BAMF_2610 cbddf2c7ae19c8cf8b63e9722d6e43a1 231 Pfam PF04002 RadC-like JAB domain 110 229 1.0E-47 T 12-10-2018 IPR025657 RadC-like JAB domain BAMF_2610 cbddf2c7ae19c8cf8b63e9722d6e43a1 231 SUPERFAMILY SSF47781 22 96 1.09E-8 T 12-10-2018 IPR010994 RuvA domain 2-like BAMF_2610 cbddf2c7ae19c8cf8b63e9722d6e43a1 231 TIGRFAM TIGR00608 radc: DNA repair protein RadC 18 231 7.4E-91 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 BAMF_2610 cbddf2c7ae19c8cf8b63e9722d6e43a1 231 SUPERFAMILY SSF102712 159 197 3.01E-5 T 12-10-2018 BAMF_2610 cbddf2c7ae19c8cf8b63e9722d6e43a1 231 Gene3D G3DSA:1.10.150.20 54 94 7.9E-6 T 12-10-2018 BAMF_3271 6fc4394d66f8600e556ee2e274bc2b00 239 SUPERFAMILY SSF48008 95 232 4.45E-31 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BAMF_3271 6fc4394d66f8600e556ee2e274bc2b00 239 SMART SM00895 99 226 4.9E-25 T 12-10-2018 IPR011711 GntR, C-terminal BAMF_3271 6fc4394d66f8600e556ee2e274bc2b00 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.1E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3271 6fc4394d66f8600e556ee2e274bc2b00 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.1E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3271 6fc4394d66f8600e556ee2e274bc2b00 239 SMART SM00345 15 74 4.7E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3271 6fc4394d66f8600e556ee2e274bc2b00 239 Gene3D G3DSA:1.10.10.10 1 74 5.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3271 6fc4394d66f8600e556ee2e274bc2b00 239 Gene3D G3DSA:1.20.120.530 80 233 4.5E-32 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BAMF_3271 6fc4394d66f8600e556ee2e274bc2b00 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.2E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3271 6fc4394d66f8600e556ee2e274bc2b00 239 SUPERFAMILY SSF46785 6 78 1.26E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3271 6fc4394d66f8600e556ee2e274bc2b00 239 Pfam PF07729 FCD domain 99 225 6.5E-27 T 12-10-2018 IPR011711 GntR, C-terminal BAMF_2201 70f250d1460dbcf5c39e0e20261dd486 258 SUPERFAMILY SSF54106 208 255 2.09E-7 T 12-10-2018 BAMF_2201 70f250d1460dbcf5c39e0e20261dd486 258 SMART SM00257 209 255 1.2E-9 T 12-10-2018 IPR018392 LysM domain BAMF_2201 70f250d1460dbcf5c39e0e20261dd486 258 Pfam PF01476 LysM domain 210 255 6.0E-9 T 12-10-2018 IPR018392 LysM domain BAMF_2201 70f250d1460dbcf5c39e0e20261dd486 258 Gene3D G3DSA:3.10.350.10 193 258 3.0E-12 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1024 58b9a1876f28dc9590dda4407c15298b 276 SUPERFAMILY SSF81338 2 235 2.09E-71 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BAMF_1024 58b9a1876f28dc9590dda4407c15298b 276 PRINTS PR00783 Major intrinsic protein family signature 214 234 1.7E-48 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BAMF_1024 58b9a1876f28dc9590dda4407c15298b 276 PRINTS PR00783 Major intrinsic protein family signature 45 69 1.7E-48 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BAMF_1024 58b9a1876f28dc9590dda4407c15298b 276 PRINTS PR00783 Major intrinsic protein family signature 82 101 1.7E-48 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BAMF_1024 58b9a1876f28dc9590dda4407c15298b 276 PRINTS PR00783 Major intrinsic protein family signature 167 189 1.7E-48 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BAMF_1024 58b9a1876f28dc9590dda4407c15298b 276 PRINTS PR00783 Major intrinsic protein family signature 3 22 1.7E-48 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BAMF_1024 58b9a1876f28dc9590dda4407c15298b 276 PRINTS PR00783 Major intrinsic protein family signature 137 155 1.7E-48 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BAMF_1024 58b9a1876f28dc9590dda4407c15298b 276 ProSitePatterns PS00221 MIP family signature. 63 71 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 BAMF_1024 58b9a1876f28dc9590dda4407c15298b 276 Gene3D G3DSA:1.20.1080.10 1 242 4.5E-76 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BAMF_1024 58b9a1876f28dc9590dda4407c15298b 276 Pfam PF00230 Major intrinsic protein 3 231 1.3E-49 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BAMF_1024 58b9a1876f28dc9590dda4407c15298b 276 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 231 1.5E-67 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BAMF_0531 dc75d742d570be3cf6bffb376d490f0b 346 Gene3D G3DSA:3.30.420.40 134 300 2.0E-123 T 12-10-2018 BAMF_0531 dc75d742d570be3cf6bffb376d490f0b 346 Gene3D G3DSA:3.30.420.40 9 322 2.0E-123 T 12-10-2018 BAMF_0531 dc75d742d570be3cf6bffb376d490f0b 346 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 10 313 2.9E-107 T 12-10-2018 IPR017861 Kae1/TsaD family BAMF_0531 dc75d742d570be3cf6bffb376d490f0b 346 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 9 320 3.1E-132 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 BAMF_0531 dc75d742d570be3cf6bffb376d490f0b 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 103 122 1.6E-51 T 12-10-2018 IPR017861 Kae1/TsaD family BAMF_0531 dc75d742d570be3cf6bffb376d490f0b 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 269 278 1.6E-51 T 12-10-2018 IPR017861 Kae1/TsaD family BAMF_0531 dc75d742d570be3cf6bffb376d490f0b 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 136 148 1.6E-51 T 12-10-2018 IPR017861 Kae1/TsaD family BAMF_0531 dc75d742d570be3cf6bffb376d490f0b 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 159 180 1.6E-51 T 12-10-2018 IPR017861 Kae1/TsaD family BAMF_0531 dc75d742d570be3cf6bffb376d490f0b 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 82 102 1.6E-51 T 12-10-2018 IPR017861 Kae1/TsaD family BAMF_0531 dc75d742d570be3cf6bffb376d490f0b 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 10 23 1.6E-51 T 12-10-2018 IPR017861 Kae1/TsaD family BAMF_0531 dc75d742d570be3cf6bffb376d490f0b 346 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 7 338 63.001 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 BAMF_0531 dc75d742d570be3cf6bffb376d490f0b 346 ProSitePatterns PS01016 Glycoprotease family signature. 102 122 - T 12-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 BAMF_0531 dc75d742d570be3cf6bffb376d490f0b 346 SUPERFAMILY SSF53067 8 128 1.43E-31 T 12-10-2018 BAMF_0531 dc75d742d570be3cf6bffb376d490f0b 346 Pfam PF00814 Glycoprotease family 30 313 2.8E-105 T 12-10-2018 IPR000905 Gcp-like domain BAMF_0531 dc75d742d570be3cf6bffb376d490f0b 346 SUPERFAMILY SSF53067 107 315 3.74E-43 T 12-10-2018 BAMF_3734 f808da0a8694c32de6883d787b00f6a6 415 SUPERFAMILY SSF103473 16 412 5.75E-40 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3734 f808da0a8694c32de6883d787b00f6a6 415 Gene3D G3DSA:1.20.1250.20 12 207 1.3E-7 T 12-10-2018 BAMF_3734 f808da0a8694c32de6883d787b00f6a6 415 Pfam PF11700 Vacuole effluxer Atg22 like 6 131 7.8E-13 T 12-10-2018 IPR024671 Autophagy-related protein 22-like BAMF_3734 f808da0a8694c32de6883d787b00f6a6 415 Pfam PF11700 Vacuole effluxer Atg22 like 138 413 3.7E-49 T 12-10-2018 IPR024671 Autophagy-related protein 22-like BAMF_3734 f808da0a8694c32de6883d787b00f6a6 415 Gene3D G3DSA:1.20.1250.20 226 415 4.7E-20 T 12-10-2018 BAMF_0302 40e6c2d710466727eb4f17af1caa2cdb 400 SMART SM00833 259 375 1.8E-50 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BAMF_0302 40e6c2d710466727eb4f17af1caa2cdb 400 SUPERFAMILY SSF52540 2 308 4.04E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0302 40e6c2d710466727eb4f17af1caa2cdb 400 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 259 375 5.9E-26 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BAMF_0302 40e6c2d710466727eb4f17af1caa2cdb 400 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 210 2.8E-58 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain BAMF_0302 40e6c2d710466727eb4f17af1caa2cdb 400 Gene3D G3DSA:3.40.50.300 1 229 2.2E-71 T 12-10-2018 BAMF_0341 3ba58455a01fea55349bbd799434f958 478 Pfam PF02687 FtsX-like permease family 341 470 3.9E-16 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BAMF_0341 3ba58455a01fea55349bbd799434f958 478 Pfam PF12704 MacB-like periplasmic core domain 24 249 5.8E-10 T 12-10-2018 IPR025857 MacB-like periplasmic core domain BAMF_1621 a29b9aa526eceabd269cd38dc0b86c43 428 ProSitePatterns PS00483 Dihydroorotase signature 2. 302 313 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1621 a29b9aa526eceabd269cd38dc0b86c43 428 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 15 424 2.4E-159 T 12-10-2018 BAMF_1621 a29b9aa526eceabd269cd38dc0b86c43 428 ProSitePatterns PS00482 Dihydroorotase signature 1. 57 65 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1621 a29b9aa526eceabd269cd38dc0b86c43 428 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 423 44.829 T 12-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BAMF_1621 a29b9aa526eceabd269cd38dc0b86c43 428 Pfam PF01979 Amidohydrolase family 50 419 2.2E-57 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BAMF_1621 a29b9aa526eceabd269cd38dc0b86c43 428 SUPERFAMILY SSF51338 1 427 1.7E-27 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_1621 a29b9aa526eceabd269cd38dc0b86c43 428 Gene3D G3DSA:2.30.40.10 7 419 4.5E-151 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_1621 a29b9aa526eceabd269cd38dc0b86c43 428 Gene3D G3DSA:3.20.20.140 54 366 4.5E-151 T 12-10-2018 BAMF_1621 a29b9aa526eceabd269cd38dc0b86c43 428 SUPERFAMILY SSF51556 54 367 3.93E-112 T 12-10-2018 IPR032466 Metal-dependent hydrolase BAMF_0345 fa7bf90bf0311d958bc46f281b609a16 39 ProDom PD048351 COMPETENCE SPORULATION FACTOR PHOSPHATASE INHIBITOR RAPC REGULATOR C PHRC 1 39 8.0E-5 T 12-10-2018 IPR020243 Phosphatase RapC inhibitor, PhrC BAMF_0345 fa7bf90bf0311d958bc46f281b609a16 39 Pfam PF11131 Rap-phr extracellular signalling 3 39 4.7E-18 T 12-10-2018 IPR025899 Phosphatase RapC/F inhibitor, PhrC/F BAMF_2810 ba4b21199f60bd2f48c4fd79d96594a0 273 SUPERFAMILY SSF161098 5 273 2.24E-68 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2810 ba4b21199f60bd2f48c4fd79d96594a0 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 265 1.3E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_2810 ba4b21199f60bd2f48c4fd79d96594a0 273 Gene3D G3DSA:1.10.3720.10 1 260 6.7E-59 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_0273 ccfb8b8eccc379f2487089c85bba54cc 413 Pfam PF03606 C4-dicarboxylate anaerobic carrier 18 411 9.0E-63 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 BAMF_2134 530f08a577702a30143a46ffd9de6581 219 Pfam PF00633 Helix-hairpin-helix motif 100 128 9.7E-10 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 BAMF_2134 530f08a577702a30143a46ffd9de6581 219 SUPERFAMILY SSF48150 3 210 4.4E-73 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BAMF_2134 530f08a577702a30143a46ffd9de6581 219 Gene3D G3DSA:1.10.1670.10 16 205 8.0E-82 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BAMF_2134 530f08a577702a30143a46ffd9de6581 219 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 BAMF_2134 530f08a577702a30143a46ffd9de6581 219 SMART SM00478 39 187 1.4E-71 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BAMF_2134 530f08a577702a30143a46ffd9de6581 219 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 189 205 6.0E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BAMF_2134 530f08a577702a30143a46ffd9de6581 219 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 170 5.7E-24 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BAMF_2134 530f08a577702a30143a46ffd9de6581 219 SMART SM00525 188 208 4.9E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BAMF_2134 530f08a577702a30143a46ffd9de6581 219 Gene3D G3DSA:1.10.340.30 22 133 8.0E-82 T 12-10-2018 BAMF_2134 530f08a577702a30143a46ffd9de6581 219 Hamap MF_00942 Endonuclease III [nth]. 1 211 39.328 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 BAMF_2134 530f08a577702a30143a46ffd9de6581 219 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 189 205 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BAMF_2134 530f08a577702a30143a46ffd9de6581 219 TIGRFAM TIGR01083 nth: endonuclease III 5 196 1.1E-88 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 BAMF_2134 530f08a577702a30143a46ffd9de6581 219 PIRSF PIRSF001435 3 214 2.4E-57 T 12-10-2018 BAMF_2652 459fc103f1e7ca8a7ba2d03bbf4abe47 148 Pfam PF10702 Protein of unknown function (DUF2507) 20 141 1.7E-47 T 12-10-2018 IPR019642 Protein of unknown function DUF2507 BAMF_2652 459fc103f1e7ca8a7ba2d03bbf4abe47 148 Gene3D G3DSA:3.30.1380.20 1 148 1.5E-61 T 12-10-2018 BAMF_2652 459fc103f1e7ca8a7ba2d03bbf4abe47 148 SUPERFAMILY SSF111126 16 127 6.8E-23 T 12-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily BAMF_0419 2363635f5982094e5f8aaf069d0fe427 273 Gene3D G3DSA:3.30.1530.10 206 269 6.0E-23 T 12-10-2018 IPR027407 Manganese catalase, C-terminal BAMF_0419 2363635f5982094e5f8aaf069d0fe427 273 Pfam PF05067 Manganese containing catalase 1 268 5.6E-126 T 12-10-2018 IPR007760 Manganese catalase BAMF_0419 2363635f5982094e5f8aaf069d0fe427 273 SUPERFAMILY SSF47240 1 271 1.61E-98 T 12-10-2018 IPR009078 Ferritin-like superfamily BAMF_0419 2363635f5982094e5f8aaf069d0fe427 273 Gene3D G3DSA:1.20.1260.10 1 198 5.7E-76 T 12-10-2018 IPR012347 Ferritin-like BAMF_2649 5c972d741934c8003a96b279548b4f59 252 SUPERFAMILY SSF54292 2 111 4.29E-22 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BAMF_2649 5c972d741934c8003a96b279548b4f59 252 Gene3D G3DSA:1.10.1060.10 113 247 3.3E-28 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BAMF_2649 5c972d741934c8003a96b279548b4f59 252 Pfam PF13183 4Fe-4S dicluster domain 150 225 2.6E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BAMF_2649 5c972d741934c8003a96b279548b4f59 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 154 165 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BAMF_2649 5c972d741934c8003a96b279548b4f59 252 SUPERFAMILY SSF46548 113 237 3.66E-27 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BAMF_2649 5c972d741934c8003a96b279548b4f59 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 116 7.9E-28 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_2649 5c972d741934c8003a96b279548b4f59 252 Gene3D G3DSA:3.10.20.30 1 111 6.0E-30 T 12-10-2018 IPR012675 Beta-grasp domain superfamily BAMF_2649 5c972d741934c8003a96b279548b4f59 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 10 233 2.7E-39 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_2280 d4643d970cf777215f637c3ecbcf1f6f 196 Gene3D G3DSA:3.20.20.70 1 179 4.9E-72 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_2280 d4643d970cf777215f637c3ecbcf1f6f 196 SUPERFAMILY SSF51395 4 178 9.06E-66 T 12-10-2018 BAMF_2280 d4643d970cf777215f637c3ecbcf1f6f 196 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 176 4.4E-61 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BAMF_0395 74099e633f01e60863d218a90b983608 282 SMART SM00267 120 282 4.3E-20 T 12-10-2018 IPR000160 GGDEF domain BAMF_0395 74099e633f01e60863d218a90b983608 282 Pfam PF00990 Diguanylate cyclase, GGDEF domain 132 277 5.8E-26 T 12-10-2018 IPR000160 GGDEF domain BAMF_0395 74099e633f01e60863d218a90b983608 282 Gene3D G3DSA:3.30.70.270 133 281 7.5E-22 T 12-10-2018 BAMF_0395 74099e633f01e60863d218a90b983608 282 SUPERFAMILY SSF55073 137 274 1.41E-18 T 12-10-2018 IPR029787 Nucleotide cyclase BAMF_0395 74099e633f01e60863d218a90b983608 282 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 132 275 8.1E-16 T 12-10-2018 IPR000160 GGDEF domain BAMF_3628 7194d5ef541b078cf1cb9f18abf532ab 123 Pfam PF04241 Protein of unknown function (DUF423) 18 105 1.8E-32 T 12-10-2018 IPR006696 Protein of unknown function DUF423 BAMF_1934 4d75a7712a37739d06fa6281ae44d77b 75 Gene3D G3DSA:3.40.50.980 6 75 4.4E-19 T 12-10-2018 BAMF_1934 4d75a7712a37739d06fa6281ae44d77b 75 SUPERFAMILY SSF56801 5 75 2.35E-18 T 12-10-2018 BAMF_1934 4d75a7712a37739d06fa6281ae44d77b 75 Pfam PF00501 AMP-binding enzyme 13 75 5.1E-16 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_3178 834737a496ff065689436335ab92a659 340 Gene3D G3DSA:3.40.720.10 14 267 1.1E-55 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BAMF_3178 834737a496ff065689436335ab92a659 340 Pfam PF00884 Sulfatase 37 257 1.0E-29 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BAMF_3178 834737a496ff065689436335ab92a659 340 SUPERFAMILY SSF53649 38 338 1.1E-49 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BAMF_2126 3f5902976c47660c1e0538aab3d70fc7 60 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 60 2.0E-25 T 12-10-2018 BAMF_2126 3f5902976c47660c1e0538aab3d70fc7 60 Pfam PF14178 YppF-like protein 1 58 1.9E-26 T 12-10-2018 IPR025553 YppF-like protein BAMF_1932 803e9a7323917da8b48757c55c6a74bc 449 Gene3D G3DSA:3.40.50.20 1 85 4.2E-36 T 12-10-2018 BAMF_1932 803e9a7323917da8b48757c55c6a74bc 449 SUPERFAMILY SSF56059 83 349 1.31E-67 T 12-10-2018 BAMF_1932 803e9a7323917da8b48757c55c6a74bc 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 6.9E-78 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1932 803e9a7323917da8b48757c55c6a74bc 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1932 803e9a7323917da8b48757c55c6a74bc 449 SMART SM00878 336 441 2.9E-49 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BAMF_1932 803e9a7323917da8b48757c55c6a74bc 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BAMF_1932 803e9a7323917da8b48757c55c6a74bc 449 SUPERFAMILY SSF52440 2 113 3.38E-47 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BAMF_1932 803e9a7323917da8b48757c55c6a74bc 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 6.6E-44 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BAMF_1932 803e9a7323917da8b48757c55c6a74bc 449 Gene3D G3DSA:3.30.1490.20 131 202 8.2E-155 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BAMF_1932 803e9a7323917da8b48757c55c6a74bc 449 SUPERFAMILY SSF51246 331 442 3.92E-36 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BAMF_1932 803e9a7323917da8b48757c55c6a74bc 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.8E-34 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BAMF_1932 803e9a7323917da8b48757c55c6a74bc 449 Gene3D G3DSA:3.30.470.20 87 440 8.2E-155 T 12-10-2018 BAMF_2225 59d7eeae1bb265fe6becdfebf29291ad 398 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 201 38.095 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BAMF_2225 59d7eeae1bb265fe6becdfebf29291ad 398 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 1 394 57.247 T 12-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BAMF_2225 59d7eeae1bb265fe6becdfebf29291ad 398 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 202 398 41.734 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BAMF_2225 59d7eeae1bb265fe6becdfebf29291ad 398 Gene3D G3DSA:3.90.870.10 1 202 1.7E-87 T 12-10-2018 BAMF_2225 59d7eeae1bb265fe6becdfebf29291ad 398 Pfam PF00925 GTP cyclohydrolase II 207 372 2.5E-75 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BAMF_2225 59d7eeae1bb265fe6becdfebf29291ad 398 SUPERFAMILY SSF55821 2 199 8.93E-84 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BAMF_2225 59d7eeae1bb265fe6becdfebf29291ad 398 Gene3D G3DSA:3.40.50.10990 203 375 8.4E-75 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BAMF_2225 59d7eeae1bb265fe6becdfebf29291ad 398 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 207 396 1.3E-78 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BAMF_2225 59d7eeae1bb265fe6becdfebf29291ad 398 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 6 196 5.1E-84 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BAMF_2225 59d7eeae1bb265fe6becdfebf29291ad 398 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 1 197 2.0E-85 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BAMF_2225 59d7eeae1bb265fe6becdfebf29291ad 398 SUPERFAMILY SSF142695 203 375 4.58E-71 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BAMF_2225 59d7eeae1bb265fe6becdfebf29291ad 398 PIRSF PIRSF001259 1 398 2.1E-193 T 12-10-2018 BAMF_1703 f480dee82ac0d33dbf956c7720164759 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 1.9E-29 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BAMF_1703 f480dee82ac0d33dbf956c7720164759 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 1.9E-29 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BAMF_1703 f480dee82ac0d33dbf956c7720164759 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 116 135 1.9E-29 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BAMF_1703 f480dee82ac0d33dbf956c7720164759 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 91 107 1.9E-29 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BAMF_1703 f480dee82ac0d33dbf956c7720164759 332 SUPERFAMILY SSF101801 251 323 7.59E-17 T 12-10-2018 IPR036429 SpoA-like superfamily BAMF_1703 f480dee82ac0d33dbf956c7720164759 332 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 322 5.1E-114 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BAMF_1703 f480dee82ac0d33dbf956c7720164759 332 Pfam PF02154 Flagellar motor switch protein FliM 40 230 5.6E-82 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BAMF_1703 f480dee82ac0d33dbf956c7720164759 332 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 254 322 4.2E-21 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) BAMF_1703 f480dee82ac0d33dbf956c7720164759 332 SUPERFAMILY SSF103039 47 232 4.97E-34 T 12-10-2018 IPR028976 CheC-like superfamily BAMF_1703 f480dee82ac0d33dbf956c7720164759 332 Gene3D G3DSA:2.30.330.10 240 327 3.6E-9 T 12-10-2018 IPR036429 SpoA-like superfamily BAMF_1703 f480dee82ac0d33dbf956c7720164759 332 Gene3D G3DSA:3.40.1550.10 46 231 1.8E-60 T 12-10-2018 IPR028976 CheC-like superfamily BAMF_1703 f480dee82ac0d33dbf956c7720164759 332 PIRSF PIRSF002888 2 332 8.9E-123 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BAMF_1522 82b58f8c5dd1fe02bbfccc32b0ffd0c9 94 SMART SM00966 8 51 1.3E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BAMF_1522 82b58f8c5dd1fe02bbfccc32b0ffd0c9 94 SUPERFAMILY SSF89447 1 51 3.92E-15 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily BAMF_1522 82b58f8c5dd1fe02bbfccc32b0ffd0c9 94 Gene3D G3DSA:2.10.260.10 1 54 2.8E-22 T 12-10-2018 BAMF_1522 82b58f8c5dd1fe02bbfccc32b0ffd0c9 94 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 2.4E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BAMF_1335 5579be10cb48ce439d59da52a3ec4fa4 276 SUPERFAMILY SSF46785 42 102 1.08E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0219 4d860bb9951106d228e8dca01aac750b 482 Gene3D G3DSA:1.20.1740.10 23 481 5.9E-64 T 12-10-2018 BAMF_0219 4d860bb9951106d228e8dca01aac750b 482 PIRSF PIRSF006060 10 481 2.6E-80 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_0219 4d860bb9951106d228e8dca01aac750b 482 Pfam PF00324 Amino acid permease 32 475 2.9E-113 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BAMF_0219 4d860bb9951106d228e8dca01aac750b 482 ProSitePatterns PS00218 Amino acid permeases signature. 57 88 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BAMF_3918 99e8e27b553eb7bd7311eb7301c70360 459 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 2 459 34.417 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 BAMF_3918 99e8e27b553eb7bd7311eb7301c70360 459 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 9 459 1.1E-131 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 BAMF_3918 99e8e27b553eb7bd7311eb7301c70360 459 PRINTS PR00449 Transforming protein P21 ras signature 222 243 8.6E-6 T 12-10-2018 BAMF_3918 99e8e27b553eb7bd7311eb7301c70360 459 PRINTS PR00449 Transforming protein P21 ras signature 262 284 8.6E-6 T 12-10-2018 BAMF_3918 99e8e27b553eb7bd7311eb7301c70360 459 PRINTS PR00449 Transforming protein P21 ras signature 326 339 8.6E-6 T 12-10-2018 BAMF_3918 99e8e27b553eb7bd7311eb7301c70360 459 Pfam PF01926 50S ribosome-binding GTPase 225 336 2.3E-25 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_3918 99e8e27b553eb7bd7311eb7301c70360 459 Pfam PF12631 MnmE helical domain 127 456 6.4E-60 T 12-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 BAMF_3918 99e8e27b553eb7bd7311eb7301c70360 459 Gene3D G3DSA:3.30.1360.120 1 124 6.2E-48 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 BAMF_3918 99e8e27b553eb7bd7311eb7301c70360 459 Gene3D G3DSA:3.40.50.300 222 387 8.8E-109 T 12-10-2018 BAMF_3918 99e8e27b553eb7bd7311eb7301c70360 459 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 225 373 7.9E-28 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BAMF_3918 99e8e27b553eb7bd7311eb7301c70360 459 SUPERFAMILY SSF52540 78 375 4.14E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3918 99e8e27b553eb7bd7311eb7301c70360 459 Pfam PF10396 GTP-binding protein TrmE N-terminus 3 124 2.1E-40 T 12-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 BAMF_3918 99e8e27b553eb7bd7311eb7301c70360 459 SUPERFAMILY SSF116878 125 459 8.76E-51 T 12-10-2018 BAMF_3918 99e8e27b553eb7bd7311eb7301c70360 459 Gene3D G3DSA:1.20.120.430 125 459 8.8E-109 T 12-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 BAMF_0265 187869082ba1cdf3fa66ece8abed6eaf 257 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 32 240 8.7E-80 T 12-10-2018 IPR022493 Integral membrane YkoY BAMF_0265 187869082ba1cdf3fa66ece8abed6eaf 257 Pfam PF03741 Integral membrane protein TerC family 35 212 2.7E-51 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 BAMF_2724 00d5e5882212f5883cd0619a293a922c 290 Pfam PF01039 Carboxyl transferase domain 63 243 1.7E-20 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 BAMF_2724 00d5e5882212f5883cd0619a293a922c 290 Gene3D G3DSA:3.90.226.10 28 282 3.9E-86 T 12-10-2018 BAMF_2724 00d5e5882212f5883cd0619a293a922c 290 SUPERFAMILY SSF52096 28 284 1.07E-80 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_2724 00d5e5882212f5883cd0619a293a922c 290 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 281 38.156 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2724 00d5e5882212f5883cd0619a293a922c 290 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 15 282 1.1E-136 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2724 00d5e5882212f5883cd0619a293a922c 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 9.3E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2724 00d5e5882212f5883cd0619a293a922c 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 9.3E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2724 00d5e5882212f5883cd0619a293a922c 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 9.3E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2724 00d5e5882212f5883cd0619a293a922c 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 9.3E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_2724 00d5e5882212f5883cd0619a293a922c 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 9.3E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BAMF_1988 3b76d660b6eede797388bede5843b2d1 325 SUPERFAMILY SSF141986 166 315 3.66E-36 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BAMF_1988 3b76d660b6eede797388bede5843b2d1 325 Pfam PF02016 LD-carboxypeptidase 12 311 3.0E-72 T 12-10-2018 IPR003507 Peptidase family S66 BAMF_1988 3b76d660b6eede797388bede5843b2d1 325 Gene3D G3DSA:3.40.50.10740 1 158 1.2E-55 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal BAMF_1988 3b76d660b6eede797388bede5843b2d1 325 PIRSF PIRSF028757 1 325 7.3E-86 T 12-10-2018 IPR003507 Peptidase family S66 BAMF_1988 3b76d660b6eede797388bede5843b2d1 325 SUPERFAMILY SSF52317 2 163 2.33E-42 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_1988 3b76d660b6eede797388bede5843b2d1 325 Gene3D G3DSA:3.50.30.60 159 320 1.9E-51 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BAMF_0744 ae9d7882e26cd3c1c4dde11834611c77 86 Pfam PF10676 Spore germination protein gerPA/gerPF 1 71 1.7E-19 T 12-10-2018 IPR019618 Spore germination protein GerPA/GerPF BAMF_0434 401f4182439b724c03c52c368d5377ca 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 392 9.0E-17 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BAMF_0434 401f4182439b724c03c52c368d5377ca 456 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 452 1.0E-139 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_0434 401f4182439b724c03c52c368d5377ca 456 SUPERFAMILY SSF53623 107 310 1.96E-53 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BAMF_0434 401f4182439b724c03c52c368d5377ca 456 Gene3D G3DSA:3.40.1190.10 87 310 2.1E-67 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BAMF_0434 401f4182439b724c03c52c368d5377ca 456 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 453 34.325 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BAMF_0434 401f4182439b724c03c52c368d5377ca 456 Pfam PF08245 Mur ligase middle domain 111 292 3.1E-49 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BAMF_0434 401f4182439b724c03c52c368d5377ca 456 SUPERFAMILY SSF53244 314 452 1.59E-35 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BAMF_0434 401f4182439b724c03c52c368d5377ca 456 SUPERFAMILY SSF63418 3 102 2.22E-22 T 12-10-2018 IPR035911 MurE/MurF, N-terminal BAMF_0434 401f4182439b724c03c52c368d5377ca 456 Pfam PF01225 Mur ligase family, catalytic domain 31 100 4.2E-9 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BAMF_0434 401f4182439b724c03c52c368d5377ca 456 Gene3D G3DSA:3.90.190.20 312 456 8.4E-43 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BAMF_0434 401f4182439b724c03c52c368d5377ca 456 Gene3D G3DSA:3.40.1390.10 2 80 2.4E-20 T 12-10-2018 BAMF_2346 79eb2befe18850520b6152b3da221d06 171 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 3 171 1.5E-51 T 12-10-2018 IPR014198 Stage III sporulation protein AB BAMF_2346 79eb2befe18850520b6152b3da221d06 171 PIRSF PIRSF021435 1 171 1.1E-68 T 12-10-2018 IPR014198 Stage III sporulation protein AB BAMF_2346 79eb2befe18850520b6152b3da221d06 171 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 3 171 5.3E-67 T 12-10-2018 IPR014198 Stage III sporulation protein AB BAMF_2131 ea0eb153b6e5bf6a263b6011db522955 252 Gene3D G3DSA:3.40.1350.10 84 252 1.1E-71 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 BAMF_2131 ea0eb153b6e5bf6a263b6011db522955 252 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 33 252 95.308 T 12-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 BAMF_2131 ea0eb153b6e5bf6a263b6011db522955 252 Pfam PF03838 Recombination protein U 81 243 3.7E-64 T 12-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 BAMF_2131 ea0eb153b6e5bf6a263b6011db522955 252 TIGRFAM TIGR00648 recU: recombination protein U 80 246 1.7E-88 T 12-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 BAMF_2131 ea0eb153b6e5bf6a263b6011db522955 252 SUPERFAMILY SSF52980 84 247 5.36E-65 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BAMF_3433 a4bb1caafc6a9daaaf24976e4aa60ea4 363 Gene3D G3DSA:1.20.1740.10 1 362 1.1E-9 T 12-10-2018 BAMF_3433 a4bb1caafc6a9daaaf24976e4aa60ea4 363 Pfam PF03845 Spore germination protein 5 317 3.9E-54 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BAMF_3433 a4bb1caafc6a9daaaf24976e4aa60ea4 363 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 5 358 1.0E-55 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BAMF_0939 4da8d4b7a722a6220816966b4efcd0e3 143 SUPERFAMILY SSF46689 1 116 1.08E-37 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_0939 4da8d4b7a722a6220816966b4efcd0e3 143 Gene3D G3DSA:1.10.10.60 10 107 4.6E-37 T 12-10-2018 BAMF_0939 4da8d4b7a722a6220816966b4efcd0e3 143 Pfam PF13022 Helix-turn-helix of insertion element transposase 6 132 1.7E-36 T 12-10-2018 IPR024978 Homeodomain, phBC6A51-type BAMF_3375 e607de756bc7257377735f07f95a5496 133 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 122 9.8E-43 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BAMF_3375 e607de756bc7257377735f07f95a5496 133 PIRSF PIRSF039090 1 128 1.2E-35 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BAMF_3375 e607de756bc7257377735f07f95a5496 133 Pfam PF02561 Flagellar protein FliS 8 119 7.7E-38 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BAMF_3375 e607de756bc7257377735f07f95a5496 133 Gene3D G3DSA:1.20.120.340 1 123 1.0E-38 T 12-10-2018 BAMF_3375 e607de756bc7257377735f07f95a5496 133 SUPERFAMILY SSF101116 4 123 4.19E-38 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 BAMF_2053 8f2ec8d4c659fc1a395636aebecf35ee 462 Gene3D G3DSA:3.40.640.10 68 341 5.9E-141 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_2053 8f2ec8d4c659fc1a395636aebecf35ee 462 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_2053 8f2ec8d4c659fc1a395636aebecf35ee 462 Gene3D G3DSA:3.90.1150.10 35 451 5.9E-141 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_2053 8f2ec8d4c659fc1a395636aebecf35ee 462 Pfam PF00202 Aminotransferase class-III 35 451 4.4E-100 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_2053 8f2ec8d4c659fc1a395636aebecf35ee 462 SUPERFAMILY SSF53383 31 454 8.48E-117 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_2053 8f2ec8d4c659fc1a395636aebecf35ee 462 PIRSF PIRSF000521 29 451 2.8E-33 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_1615 02a34fa3370a503acb0687d2b43bdf38 123 Gene3D G3DSA:1.20.120.910 1 95 4.1E-13 T 12-10-2018 BAMF_1615 02a34fa3370a503acb0687d2b43bdf38 123 PIRSF PIRSF026544 1 123 3.6E-57 T 12-10-2018 IPR016841 Transcription regulator DksA-related, predicted BAMF_1615 02a34fa3370a503acb0687d2b43bdf38 123 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 72 96 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BAMF_1577 02c1be4912017a7be9eeba29e4ba2a4a 408 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 10 390 6.6E-134 T 12-10-2018 IPR014226 Sporulation integral membrane protein YlbJ BAMF_1577 02c1be4912017a7be9eeba29e4ba2a4a 408 Pfam PF07670 Nucleoside recognition 44 141 8.4E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BAMF_3033 d2564051cfb6643da2975427108a0075 256 Gene3D G3DSA:3.40.50.1000 5 230 4.6E-92 T 12-10-2018 IPR023214 HAD superfamily BAMF_3033 d2564051cfb6643da2975427108a0075 256 Pfam PF13344 Haloacid dehalogenase-like hydrolase 8 106 4.8E-29 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA BAMF_3033 d2564051cfb6643da2975427108a0075 256 Pfam PF13242 HAD-hyrolase-like 179 251 3.3E-21 T 12-10-2018 BAMF_3033 d2564051cfb6643da2975427108a0075 256 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 4 252 1.6E-138 T 12-10-2018 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 BAMF_3033 d2564051cfb6643da2975427108a0075 256 Gene3D G3DSA:3.40.50.1000 84 179 4.6E-92 T 12-10-2018 IPR023214 HAD superfamily BAMF_3033 d2564051cfb6643da2975427108a0075 256 SUPERFAMILY SSF56784 3 253 3.07E-76 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_3033 d2564051cfb6643da2975427108a0075 256 PIRSF PIRSF000915 1 256 3.9E-60 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA BAMF_3033 d2564051cfb6643da2975427108a0075 256 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 228 1.9E-41 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA BAMF_0294 dcac082a3da65a91f3004502b7a72df9 515 Pfam PF00171 Aldehyde dehydrogenase family 50 511 7.7E-155 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BAMF_0294 dcac082a3da65a91f3004502b7a72df9 515 SUPERFAMILY SSF53720 4 511 4.19E-156 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BAMF_0294 dcac082a3da65a91f3004502b7a72df9 515 Gene3D G3DSA:3.40.309.10 290 480 1.1E-190 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BAMF_0294 dcac082a3da65a91f3004502b7a72df9 515 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 313 324 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BAMF_0294 dcac082a3da65a91f3004502b7a72df9 515 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 285 292 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BAMF_0294 dcac082a3da65a91f3004502b7a72df9 515 Gene3D G3DSA:3.40.605.10 10 511 1.1E-190 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BAMF_0294 dcac082a3da65a91f3004502b7a72df9 515 Hamap MF_00733 1-pyrroline-5-carboxylate dehydrogenase [rocA]. 1 515 67.603 T 12-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 BAMF_0294 dcac082a3da65a91f3004502b7a72df9 515 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 5 515 3.0E-290 T 12-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 BAMF_1016 f62f9e5d834c0ee252d3071864c7f3bd 198 TIGRFAM TIGR01076 sortase_fam: sortase 74 195 1.5E-41 T 12-10-2018 IPR005754 Sortase family BAMF_1016 f62f9e5d834c0ee252d3071864c7f3bd 198 SUPERFAMILY SSF63817 63 197 3.53E-33 T 12-10-2018 IPR023365 Sortase domain superfamily BAMF_1016 f62f9e5d834c0ee252d3071864c7f3bd 198 Gene3D G3DSA:2.40.260.10 17 198 4.6E-41 T 12-10-2018 IPR023365 Sortase domain superfamily BAMF_1016 f62f9e5d834c0ee252d3071864c7f3bd 198 Pfam PF04203 Sortase family 76 197 6.1E-26 T 12-10-2018 IPR005754 Sortase family BAMF_0738 aad4588bf4b8475e6f0cc9e0fa03b3ab 457 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 390 407 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BAMF_0738 aad4588bf4b8475e6f0cc9e0fa03b3ab 457 Gene3D G3DSA:3.30.1360.60 375 454 3.5E-25 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BAMF_0738 aad4588bf4b8475e6f0cc9e0fa03b3ab 457 Pfam PF02378 Phosphotransferase system, EIIC 9 293 2.1E-78 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BAMF_0738 aad4588bf4b8475e6f0cc9e0fa03b3ab 457 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 448 1.2E-181 T 12-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 BAMF_0738 aad4588bf4b8475e6f0cc9e0fa03b3ab 457 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 351 437 9.1E-19 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BAMF_0738 aad4588bf4b8475e6f0cc9e0fa03b3ab 457 SUPERFAMILY SSF55604 380 450 2.48E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BAMF_0738 aad4588bf4b8475e6f0cc9e0fa03b3ab 457 Pfam PF00367 phosphotransferase system, EIIB 380 412 1.8E-13 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BAMF_1439 cf02d99524ed5580eed040b782b25b12 259 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 141 161 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site BAMF_1439 cf02d99524ed5580eed040b782b25b12 259 Gene3D G3DSA:3.60.110.10 1 259 3.2E-90 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BAMF_1439 cf02d99524ed5580eed040b782b25b12 259 Pfam PF00795 Carbon-nitrogen hydrolase 5 245 9.5E-49 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BAMF_1439 cf02d99524ed5580eed040b782b25b12 259 SUPERFAMILY SSF56317 3 259 4.71E-74 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BAMF_0024 dae300197254a35c836078d185c578da 87 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 11 83 3.4E-17 T 12-10-2018 IPR010001 SigmaK-factor processing regulatory BofA BAMF_0024 dae300197254a35c836078d185c578da 87 TIGRFAM TIGR02862 spore_BofA: pro-sigmaK processing inhibitor BofA 5 86 3.8E-26 T 12-10-2018 IPR010001 SigmaK-factor processing regulatory BofA BAMF_1213 70a2d9680af211f7ceaf9961c366b8c3 304 Gene3D G3DSA:1.10.3720.10 91 299 2.1E-19 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1213 70a2d9680af211f7ceaf9961c366b8c3 304 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 77 3.8E-13 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BAMF_1213 70a2d9680af211f7ceaf9961c366b8c3 304 SUPERFAMILY SSF161098 95 287 8.9E-26 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1213 70a2d9680af211f7ceaf9961c366b8c3 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 301 9.1E-29 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_1558 6b0cb0a14aff3614089c5362d530ad1a 93 Pfam PF07408 Protein of unknown function (DUF1507) 9 90 4.2E-41 T 12-10-2018 IPR009983 Uncharacterised protein family UPF0358 BAMF_1558 6b0cb0a14aff3614089c5362d530ad1a 93 Hamap MF_01560 UPF0358 protein . 3 93 26.816 T 12-10-2018 IPR009983 Uncharacterised protein family UPF0358 BAMF_1558 6b0cb0a14aff3614089c5362d530ad1a 93 SUPERFAMILY SSF140404 7 84 7.59E-37 T 12-10-2018 IPR036270 UPF0358 superfamily BAMF_1558 6b0cb0a14aff3614089c5362d530ad1a 93 Gene3D G3DSA:1.10.287.750 4 92 5.1E-37 T 12-10-2018 IPR036270 UPF0358 superfamily BAMF_0707 a3d542f28a12f477e5870dd958acff68 355 SUPERFAMILY SSF53448 3 154 4.78E-27 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0707 a3d542f28a12f477e5870dd958acff68 355 SUPERFAMILY SSF48452 195 350 3.03E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_0707 a3d542f28a12f477e5870dd958acff68 355 Pfam PF00535 Glycosyl transferase family 2 5 132 1.2E-21 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BAMF_0707 a3d542f28a12f477e5870dd958acff68 355 Gene3D G3DSA:1.25.40.10 201 353 9.3E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_0707 a3d542f28a12f477e5870dd958acff68 355 Gene3D G3DSA:3.90.550.10 2 200 3.0E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_2027 896b31020c8206acdeabac88d0b92861 175 Gene3D G3DSA:3.40.50.1820 2 175 8.1E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2027 896b31020c8206acdeabac88d0b92861 175 SUPERFAMILY SSF53474 5 174 1.2E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2027 896b31020c8206acdeabac88d0b92861 175 Pfam PF01738 Dienelactone hydrolase family 71 174 2.2E-8 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 BAMF_1782 98941cd7a3bba01a4770d8bffb44cd6f 82 Gene3D G3DSA:1.10.1200.10 1 78 8.7E-20 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1782 98941cd7a3bba01a4770d8bffb44cd6f 82 SUPERFAMILY SSF47336 1 78 3.8E-13 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1782 98941cd7a3bba01a4770d8bffb44cd6f 82 Pfam PF00550 Phosphopantetheine attachment site 12 73 4.8E-8 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_0804 a632a51ce980c1c75ec09a03009ac76f 865 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 31 295 1.8E-12 T 12-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD BAMF_0804 a632a51ce980c1c75ec09a03009ac76f 865 SUPERFAMILY SSF55729 651 830 1.77E-11 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_0804 a632a51ce980c1c75ec09a03009ac76f 865 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 541 831 1.3E-96 T 12-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal BAMF_0782 db6b01c0374e6cdd92ef3ebebf60bf33 342 Gene3D G3DSA:3.40.50.970 3 204 1.2E-80 T 12-10-2018 BAMF_0782 db6b01c0374e6cdd92ef3ebebf60bf33 342 SUPERFAMILY SSF52922 201 336 1.83E-38 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BAMF_0782 db6b01c0374e6cdd92ef3ebebf60bf33 342 SMART SM00861 5 192 3.8E-58 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BAMF_0782 db6b01c0374e6cdd92ef3ebebf60bf33 342 Pfam PF02780 Transketolase, C-terminal domain 206 328 2.5E-38 T 12-10-2018 IPR033248 Transketolase, C-terminal domain BAMF_0782 db6b01c0374e6cdd92ef3ebebf60bf33 342 SUPERFAMILY SSF52518 3 216 2.26E-63 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_0782 db6b01c0374e6cdd92ef3ebebf60bf33 342 Gene3D G3DSA:3.40.50.920 205 336 2.5E-43 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BAMF_0782 db6b01c0374e6cdd92ef3ebebf60bf33 342 Pfam PF02779 Transketolase, pyrimidine binding domain 5 192 2.5E-53 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BAMF_2707 32ce30b6a36c5bb3313c0e9140ea89b6 399 Gene3D G3DSA:1.20.1250.20 5 383 5.9E-49 T 12-10-2018 BAMF_2707 32ce30b6a36c5bb3313c0e9140ea89b6 399 Pfam PF07690 Major Facilitator Superfamily 16 321 1.3E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_2707 32ce30b6a36c5bb3313c0e9140ea89b6 399 SUPERFAMILY SSF103473 8 391 2.62E-61 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_2182 3b7b960594999cd31187d09c45e3fddd 244 ProDom PD119161 YPHF BH1644 PROTEINS PRECURSOR ORF1 RBL05088 SIGNAL SIMILAR 17 239 3.0E-95 T 12-10-2018 BAMF_0284 9b5673ceb5863daaf3bdbf0ba20fb72b 448 Gene3D G3DSA:1.20.1740.10 7 442 8.7E-46 T 12-10-2018 BAMF_0284 9b5673ceb5863daaf3bdbf0ba20fb72b 448 Pfam PF00324 Amino acid permease 18 378 6.9E-44 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BAMF_0284 9b5673ceb5863daaf3bdbf0ba20fb72b 448 PIRSF PIRSF006060 1 440 5.2E-44 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_0295 aaa1b4f8b830682d86836d6701fae56e 484 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 2 480 2.3E-222 T 12-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 BAMF_0295 aaa1b4f8b830682d86836d6701fae56e 484 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 151 176 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site BAMF_0295 aaa1b4f8b830682d86836d6701fae56e 484 Gene3D G3DSA:1.20.1730.10 17 482 4.6E-102 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily BAMF_0295 aaa1b4f8b830682d86836d6701fae56e 484 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 409 429 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site BAMF_0295 aaa1b4f8b830682d86836d6701fae56e 484 Pfam PF00474 Sodium:solute symporter family 29 427 2.2E-109 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BAMF_0295 aaa1b4f8b830682d86836d6701fae56e 484 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 29 427 2.1E-100 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BAMF_2636 becb06e4c3e4fc46be2ddbd7683a7c03 342 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 325 3.8E-66 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BAMF_2636 becb06e4c3e4fc46be2ddbd7683a7c03 342 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 327 3.9E-150 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BAMF_2636 becb06e4c3e4fc46be2ddbd7683a7c03 342 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 177 2.5E-76 T 12-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BAMF_2636 becb06e4c3e4fc46be2ddbd7683a7c03 342 SUPERFAMILY SSF48179 183 332 2.04E-71 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_2636 becb06e4c3e4fc46be2ddbd7683a7c03 342 SUPERFAMILY SSF51735 3 182 1.21E-71 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2636 becb06e4c3e4fc46be2ddbd7683a7c03 342 Gene3D G3DSA:1.10.3730.40 182 337 2.5E-70 T 12-10-2018 BAMF_2636 becb06e4c3e4fc46be2ddbd7683a7c03 342 Gene3D G3DSA:3.40.50.720 1 181 4.9E-78 T 12-10-2018 BAMF_2636 becb06e4c3e4fc46be2ddbd7683a7c03 342 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 328 44.568 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BAMF_2636 becb06e4c3e4fc46be2ddbd7683a7c03 342 PIRSF PIRSF000116 3 206 7.2E-41 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BAMF_2636 becb06e4c3e4fc46be2ddbd7683a7c03 342 PIRSF PIRSF000116 201 332 2.0E-16 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BAMF_3124 eeeb69d072aa1498ddbfe1c39efc9a41 789 Gene3D G3DSA:1.10.1040.10 209 330 4.9E-19 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BAMF_3124 eeeb69d072aa1498ddbfe1c39efc9a41 789 SUPERFAMILY SSF52096 483 786 7.46E-40 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_3124 eeeb69d072aa1498ddbfe1c39efc9a41 789 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 205 1.4E-42 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BAMF_3124 eeeb69d072aa1498ddbfe1c39efc9a41 789 Pfam PF00378 Enoyl-CoA hydratase/isomerase 490 623 1.5E-12 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BAMF_3124 eeeb69d072aa1498ddbfe1c39efc9a41 789 Gene3D G3DSA:1.10.1040.10 367 436 1.1E-7 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BAMF_3124 eeeb69d072aa1498ddbfe1c39efc9a41 789 SUPERFAMILY SSF51735 4 206 2.29E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3124 eeeb69d072aa1498ddbfe1c39efc9a41 789 Gene3D G3DSA:3.40.50.720 1 208 9.1E-64 T 12-10-2018 BAMF_3124 eeeb69d072aa1498ddbfe1c39efc9a41 789 Gene3D G3DSA:3.90.226.10 485 688 3.2E-31 T 12-10-2018 BAMF_3124 eeeb69d072aa1498ddbfe1c39efc9a41 789 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 208 306 3.1E-11 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BAMF_3124 eeeb69d072aa1498ddbfe1c39efc9a41 789 SUPERFAMILY SSF48179 357 449 2.47E-17 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_3124 eeeb69d072aa1498ddbfe1c39efc9a41 789 SUPERFAMILY SSF48179 206 326 4.59E-21 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_2865 5bf2f91b3b30a22d5eeb9fe7772b28f5 156 Pfam PF03073 TspO/MBR family 12 152 4.1E-28 T 12-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 BAMF_2865 5bf2f91b3b30a22d5eeb9fe7772b28f5 156 PIRSF PIRSF005859 1 156 2.8E-37 T 12-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 BAMF_2865 5bf2f91b3b30a22d5eeb9fe7772b28f5 156 Gene3D G3DSA:1.20.1260.100 2 156 1.7E-29 T 12-10-2018 IPR038330 TspO/MBR-related superfamily BAMF_3134 8932a1e7b8fa120ab98553fc29543221 274 Gene3D G3DSA:3.40.50.300 1 252 3.0E-66 T 12-10-2018 BAMF_3134 8932a1e7b8fa120ab98553fc29543221 274 SMART SM00382 28 225 3.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3134 8932a1e7b8fa120ab98553fc29543221 274 Pfam PF00005 ABC transporter 20 167 5.3E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3134 8932a1e7b8fa120ab98553fc29543221 274 SUPERFAMILY SSF52540 4 229 1.41E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3134 8932a1e7b8fa120ab98553fc29543221 274 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3369 0712cf60450c9618f431e0e57eb9bff9 282 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 222 276 1.0E-20 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 BAMF_3369 0712cf60450c9618f431e0e57eb9bff9 282 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 14 216 2.5E-60 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BAMF_3369 0712cf60450c9618f431e0e57eb9bff9 282 Gene3D G3DSA:3.30.70.120 193 269 1.3E-24 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BAMF_3369 0712cf60450c9618f431e0e57eb9bff9 282 PIRSF PIRSF006483 1 282 9.2E-81 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BAMF_1222 609ca79bcd9954ccec0f3d3d1d156886 192 Pfam PF13508 Acetyltransferase (GNAT) domain 49 110 3.5E-7 T 12-10-2018 IPR000182 GNAT domain BAMF_1222 609ca79bcd9954ccec0f3d3d1d156886 192 SUPERFAMILY SSF55729 47 114 5.05E-7 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_1222 609ca79bcd9954ccec0f3d3d1d156886 192 Gene3D G3DSA:3.40.630.30 1 135 5.6E-22 T 12-10-2018 BAMF_2777 13425bff7272d618e453bf6e494c215a 137 Pfam PF12732 YtxH-like protein 12 93 6.5E-21 T 12-10-2018 IPR024623 Uncharacterised protein family YtxH BAMF_2777 13425bff7272d618e453bf6e494c215a 137 Gene3D G3DSA:1.20.120.20 30 136 2.0E-6 T 12-10-2018 BAMF_0798 1eef650079ba14ba8cccfcc685210711 200 Gene3D G3DSA:3.40.50.360 1 199 4.4E-48 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_0798 1eef650079ba14ba8cccfcc685210711 200 Pfam PF02525 Flavodoxin-like fold 1 187 1.1E-37 T 12-10-2018 IPR003680 Flavodoxin-like fold BAMF_0798 1eef650079ba14ba8cccfcc685210711 200 SUPERFAMILY SSF52218 1 192 3.22E-46 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_0111 43007148d37f8b0dbe618e6dcbb24fef 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.69 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BAMF_0111 43007148d37f8b0dbe618e6dcbb24fef 156 PIRSF PIRSF002122 5 156 2.7E-60 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 BAMF_0111 43007148d37f8b0dbe618e6dcbb24fef 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0111 43007148d37f8b0dbe618e6dcbb24fef 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.6E-71 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BAMF_0111 43007148d37f8b0dbe618e6dcbb24fef 156 Gene3D G3DSA:1.10.455.10 2 156 3.1E-65 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily BAMF_0111 43007148d37f8b0dbe618e6dcbb24fef 156 SUPERFAMILY SSF47973 1 149 7.06E-62 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily BAMF_0111 43007148d37f8b0dbe618e6dcbb24fef 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 5.2E-67 T 12-10-2018 IPR023798 Ribosomal protein S7 domain BAMF_2245 a4973d7aef4986b813db8166f47aee2f 395 Gene3D G3DSA:3.40.720.10 8 391 4.5E-176 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BAMF_2245 a4973d7aef4986b813db8166f47aee2f 395 Gene3D G3DSA:3.30.70.1250 102 220 4.5E-176 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BAMF_2245 a4973d7aef4986b813db8166f47aee2f 395 Hamap MF_00740 Phosphopentomutase [deoB]. 7 391 55.389 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BAMF_2245 a4973d7aef4986b813db8166f47aee2f 395 TIGRFAM TIGR01696 deoB: phosphopentomutase 9 389 2.5E-216 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BAMF_2245 a4973d7aef4986b813db8166f47aee2f 395 SUPERFAMILY SSF143856 104 220 1.44E-50 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BAMF_2245 a4973d7aef4986b813db8166f47aee2f 395 PIRSF PIRSF001491 6 395 8.3E-167 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BAMF_2245 a4973d7aef4986b813db8166f47aee2f 395 Pfam PF01676 Metalloenzyme superfamily 8 383 7.4E-48 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 BAMF_2245 a4973d7aef4986b813db8166f47aee2f 395 SUPERFAMILY SSF53649 6 394 3.93E-79 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BAMF_3242 12000bf2aaaa16b89e9925e57a30a544 402 PRINTS PR01988 Putative bacilysin exporter bacE signature 138 159 3.5E-7 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_3242 12000bf2aaaa16b89e9925e57a30a544 402 PRINTS PR01988 Putative bacilysin exporter bacE signature 292 315 3.5E-7 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_3242 12000bf2aaaa16b89e9925e57a30a544 402 PRINTS PR01988 Putative bacilysin exporter bacE signature 165 182 3.5E-7 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_3242 12000bf2aaaa16b89e9925e57a30a544 402 PRINTS PR01988 Putative bacilysin exporter bacE signature 46 64 3.5E-7 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_3242 12000bf2aaaa16b89e9925e57a30a544 402 Gene3D G3DSA:1.20.1250.20 5 388 5.0E-27 T 12-10-2018 BAMF_3242 12000bf2aaaa16b89e9925e57a30a544 402 SUPERFAMILY SSF103473 7 388 2.22E-29 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3242 12000bf2aaaa16b89e9925e57a30a544 402 Pfam PF07690 Major Facilitator Superfamily 11 347 2.7E-18 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_1443 ace637b51f903ee3daad5c58273a3c70 178 Pfam PF03079 ARD/ARD' family 3 169 5.5E-50 T 12-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 BAMF_1443 ace637b51f903ee3daad5c58273a3c70 178 Gene3D G3DSA:2.60.120.10 1 171 2.1E-60 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_1443 ace637b51f903ee3daad5c58273a3c70 178 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 176 30.782 T 12-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 BAMF_1443 ace637b51f903ee3daad5c58273a3c70 178 SUPERFAMILY SSF51182 8 174 1.51E-35 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BAMF_3323 4d6292398760be2096e5cc79646696e9 317 Hamap MF_00973 Gluconeogenesis factor. 3 317 36.722 T 12-10-2018 IPR010119 Gluconeogenesis factor BAMF_3323 4d6292398760be2096e5cc79646696e9 317 SUPERFAMILY SSF142338 4 312 1.44E-109 T 12-10-2018 BAMF_3323 4d6292398760be2096e5cc79646696e9 317 Gene3D G3DSA:3.40.50.12300 1 316 3.0E-132 T 12-10-2018 IPR038136 Gluconeogenesis factor superfamily BAMF_3323 4d6292398760be2096e5cc79646696e9 317 Pfam PF01933 Uncharacterised protein family UPF0052 7 292 1.4E-108 T 12-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 BAMF_3323 4d6292398760be2096e5cc79646696e9 317 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 7 315 4.8E-132 T 12-10-2018 IPR010119 Gluconeogenesis factor BAMF_2423 9489528217340bdbca2342089ef617e8 679 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 541 2.8E-212 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_2423 9489528217340bdbca2342089ef617e8 679 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 676 27.449 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_2423 9489528217340bdbca2342089ef617e8 679 Pfam PF05746 DALR anticodon binding domain 575 669 5.6E-8 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BAMF_2423 9489528217340bdbca2342089ef617e8 679 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 676 1.1E-297 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_2423 9489528217340bdbca2342089ef617e8 679 SUPERFAMILY SSF109604 338 492 1.15E-18 T 12-10-2018 BAMF_2423 9489528217340bdbca2342089ef617e8 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 243 258 4.4E-38 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_2423 9489528217340bdbca2342089ef617e8 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 4.4E-38 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_2423 9489528217340bdbca2342089ef617e8 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 4.4E-38 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_2423 9489528217340bdbca2342089ef617e8 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 4.4E-38 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_2423 9489528217340bdbca2342089ef617e8 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 315 331 4.4E-38 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_1648 89bab71950fa3146f8d85daf3243051d 253 SMART SM00331 7 242 5.0E-59 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_1648 89bab71950fa3146f8d85daf3243051d 253 SMART SM00332 1 240 2.0E-34 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_1648 89bab71950fa3146f8d85daf3243051d 253 Gene3D G3DSA:3.60.40.10 1 246 1.6E-76 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_1648 89bab71950fa3146f8d85daf3243051d 253 SUPERFAMILY SSF81606 5 242 1.29E-69 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BAMF_1648 89bab71950fa3146f8d85daf3243051d 253 Pfam PF13672 Protein phosphatase 2C 12 204 1.5E-24 T 12-10-2018 BAMF_1996 38b93cf16c4f19c1d6d1d5fea2b88c3a 160 SUPERFAMILY SSF49764 55 148 1.46E-15 T 12-10-2018 IPR008978 HSP20-like chaperone BAMF_1996 38b93cf16c4f19c1d6d1d5fea2b88c3a 160 Gene3D G3DSA:2.60.40.790 40 151 9.4E-16 T 12-10-2018 IPR008978 HSP20-like chaperone BAMF_1996 38b93cf16c4f19c1d6d1d5fea2b88c3a 160 Pfam PF00011 Hsp20/alpha crystallin family 61 152 9.8E-10 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain BAMF_3612 e0d91d29e374ed8ca0b4b4f9e1735b0d 515 SUPERFAMILY SSF53720 4 511 1.57E-158 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BAMF_3612 e0d91d29e374ed8ca0b4b4f9e1735b0d 515 Gene3D G3DSA:3.40.309.10 290 480 1.1E-192 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BAMF_3612 e0d91d29e374ed8ca0b4b4f9e1735b0d 515 Gene3D G3DSA:3.40.605.10 9 509 1.1E-192 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BAMF_3612 e0d91d29e374ed8ca0b4b4f9e1735b0d 515 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 313 324 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BAMF_3612 e0d91d29e374ed8ca0b4b4f9e1735b0d 515 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 285 292 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BAMF_3612 e0d91d29e374ed8ca0b4b4f9e1735b0d 515 Pfam PF00171 Aldehyde dehydrogenase family 49 510 8.3E-160 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BAMF_3612 e0d91d29e374ed8ca0b4b4f9e1735b0d 515 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 5 514 3.8E-259 T 12-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 PIRSF PIRSF005814 1 785 3.6E-290 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 SUPERFAMILY SSF160443 708 785 2.62E-9 T 12-10-2018 IPR036063 Smr domain superfamily BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 TIGRFAM TIGR01069 mutS2: MutS2 family protein 2 785 0.0 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 Gene3D G3DSA:3.40.50.300 292 598 5.6E-87 T 12-10-2018 BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 SMART SM00533 9 315 2.7E-47 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 410 426 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 SMART SM00534 328 513 1.1E-84 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 SUPERFAMILY SSF48334 21 288 3.53E-29 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 784 22.491 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 SMART SM00463 707 785 4.2E-21 T 12-10-2018 IPR002625 Smr domain BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 SUPERFAMILY SSF52540 292 512 8.26E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 Gene3D G3DSA:1.10.1420.10 138 259 1.7E-9 T 12-10-2018 BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 Pfam PF00488 MutS domain V 331 512 2.4E-37 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 Gene3D G3DSA:3.30.1370.110 698 785 1.4E-23 T 12-10-2018 BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 Gene3D G3DSA:1.10.1420.10 34 281 1.7E-9 T 12-10-2018 BAMF_2664 c65c73be6190f410b4524681dd7fcb88 785 Pfam PF01713 Smr domain 710 785 1.5E-19 T 12-10-2018 IPR002625 Smr domain BAMF_3778 cc38e21793aafa0ee9bb51cb23a15598 229 Gene3D G3DSA:1.10.10.10 128 227 3.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3778 cc38e21793aafa0ee9bb51cb23a15598 229 Gene3D G3DSA:3.40.50.2300 2 127 9.3E-33 T 12-10-2018 BAMF_3778 cc38e21793aafa0ee9bb51cb23a15598 229 SMART SM00448 2 112 1.4E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3778 cc38e21793aafa0ee9bb51cb23a15598 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.5E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_3778 cc38e21793aafa0ee9bb51cb23a15598 229 SUPERFAMILY SSF52172 3 178 2.85E-36 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_3778 cc38e21793aafa0ee9bb51cb23a15598 229 Pfam PF00072 Response regulator receiver domain 4 112 1.8E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3778 cc38e21793aafa0ee9bb51cb23a15598 229 SMART SM00862 150 225 1.9E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_3398 55ab97befd22bc1629025be20239cb8c 495 Pfam PF04932 O-Antigen ligase 263 409 5.2E-14 T 12-10-2018 IPR007016 O-antigen ligase-related BAMF_2181 535b734696b6ef4d149b5746c297379f 503 Pfam PF09547 Stage IV sporulation protein A (spore_IV_A) 13 503 2.3E-226 T 12-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 BAMF_2181 535b734696b6ef4d149b5746c297379f 503 SUPERFAMILY SSF52540 30 237 1.04E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2181 535b734696b6ef4d149b5746c297379f 503 Gene3D G3DSA:3.40.50.300 22 247 4.5E-10 T 12-10-2018 BAMF_2181 535b734696b6ef4d149b5746c297379f 503 PIRSF PIRSF007466 12 503 9.4E-268 T 12-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 BAMF_2181 535b734696b6ef4d149b5746c297379f 503 TIGRFAM TIGR02836 spore_IV_A: stage IV sporulation protein A 12 503 2.4E-272 T 12-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 BAMF_3721 6e1794673a3eb2fb126f6af9da511419 410 Gene3D G3DSA:3.40.630.10 5 402 1.0E-186 T 12-10-2018 BAMF_3721 6e1794673a3eb2fb126f6af9da511419 410 Pfam PF01546 Peptidase family M20/M25/M40 141 403 3.2E-15 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BAMF_3721 6e1794673a3eb2fb126f6af9da511419 410 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 140 179 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BAMF_3721 6e1794673a3eb2fb126f6af9da511419 410 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BAMF_3721 6e1794673a3eb2fb126f6af9da511419 410 SUPERFAMILY SSF53187 3 406 6.04E-84 T 12-10-2018 BAMF_3721 6e1794673a3eb2fb126f6af9da511419 410 Gene3D G3DSA:3.30.70.360 211 321 1.0E-186 T 12-10-2018 BAMF_3721 6e1794673a3eb2fb126f6af9da511419 410 PIRSF PIRSF037215 1 410 6.6E-197 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 BAMF_3721 6e1794673a3eb2fb126f6af9da511419 410 Pfam PF07687 Peptidase dimerisation domain 209 307 1.8E-12 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain BAMF_3721 6e1794673a3eb2fb126f6af9da511419 410 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 410 1.5E-212 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 BAMF_3721 6e1794673a3eb2fb126f6af9da511419 410 Hamap MF_00550 Peptidase T [pepT]. 2 406 60.264 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 BAMF_3721 6e1794673a3eb2fb126f6af9da511419 410 SUPERFAMILY SSF55031 211 322 3.84E-42 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BAMF_3777 1dff3014de45fb79b0ae2a52f5833ea2 325 SMART SM00387 213 325 5.5E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3777 1dff3014de45fb79b0ae2a52f5833ea2 325 Gene3D G3DSA:1.10.287.130 120 165 1.1E-29 T 12-10-2018 BAMF_3777 1dff3014de45fb79b0ae2a52f5833ea2 325 Gene3D G3DSA:3.30.565.10 166 320 1.1E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3777 1dff3014de45fb79b0ae2a52f5833ea2 325 SUPERFAMILY SSF55874 158 321 1.63E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3777 1dff3014de45fb79b0ae2a52f5833ea2 325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 303 1.4E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3777 1dff3014de45fb79b0ae2a52f5833ea2 325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 251 265 1.4E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3777 1dff3014de45fb79b0ae2a52f5833ea2 325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 269 279 1.4E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3777 1dff3014de45fb79b0ae2a52f5833ea2 325 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 322 1.4E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3777 1dff3014de45fb79b0ae2a52f5833ea2 325 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 214 321 2.6E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3562 b7f1b15eae579edb635ab9756d2c1461 487 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 484 3.1E-288 T 12-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 BAMF_3562 b7f1b15eae579edb635ab9756d2c1461 487 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 356 436 1.9E-28 T 12-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 BAMF_3562 b7f1b15eae579edb635ab9756d2c1461 487 Gene3D G3DSA:3.30.70.20 1 301 1.3E-99 T 12-10-2018 BAMF_3562 b7f1b15eae579edb635ab9756d2c1461 487 SUPERFAMILY SSF54862 2 485 6.49E-160 T 12-10-2018 BAMF_3562 b7f1b15eae579edb635ab9756d2c1461 487 Pfam PF13247 4Fe-4S dicluster domain 172 269 5.0E-37 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BAMF_3562 b7f1b15eae579edb635ab9756d2c1461 487 Gene3D G3DSA:1.10.3650.10 356 434 1.4E-27 T 12-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 BAMF_0230 ef530c72584b55d6eda0123a3e42eb58 297 Gene3D G3DSA:1.20.1510.10 8 212 6.7E-53 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BAMF_0230 ef530c72584b55d6eda0123a3e42eb58 297 Pfam PF01545 Cation efflux family 14 212 2.9E-47 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BAMF_0230 ef530c72584b55d6eda0123a3e42eb58 297 Gene3D G3DSA:3.30.70.1350 213 295 2.1E-18 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BAMF_0230 ef530c72584b55d6eda0123a3e42eb58 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 294 3.9E-85 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BAMF_0230 ef530c72584b55d6eda0123a3e42eb58 297 SUPERFAMILY SSF161111 7 213 1.7E-49 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BAMF_0230 ef530c72584b55d6eda0123a3e42eb58 297 SUPERFAMILY SSF160240 215 294 3.92E-18 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BAMF_0230 ef530c72584b55d6eda0123a3e42eb58 297 Pfam PF16916 Dimerisation domain of Zinc Transporter 217 294 1.4E-20 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain BAMF_2483 4b5f0aef5105aff6d0c4e2cbabac150b 450 Gene3D G3DSA:3.40.640.10 51 311 1.5E-157 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_2483 4b5f0aef5105aff6d0c4e2cbabac150b 450 PIRSF PIRSF000412 6 449 4.4E-123 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BAMF_2483 4b5f0aef5105aff6d0c4e2cbabac150b 450 Pfam PF00464 Serine hydroxymethyltransferase 25 406 9.3E-128 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BAMF_2483 4b5f0aef5105aff6d0c4e2cbabac150b 450 Gene3D G3DSA:3.90.1150.10 25 414 1.5E-157 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_2483 4b5f0aef5105aff6d0c4e2cbabac150b 450 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 21 447 41.843 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BAMF_2483 4b5f0aef5105aff6d0c4e2cbabac150b 450 SUPERFAMILY SSF53383 22 447 1.14E-132 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_2205 0a82eab6f1f49e6ac4229b18b5377617 82 Gene3D G3DSA:3.30.70.20 2 82 3.7E-35 T 12-10-2018 BAMF_2205 0a82eab6f1f49e6ac4229b18b5377617 82 SUPERFAMILY SSF54862 4 73 2.17E-13 T 12-10-2018 BAMF_2205 0a82eab6f1f49e6ac4229b18b5377617 82 PRINTS PR00352 3Fe-4S ferredoxin signature 55 67 5.4E-8 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 BAMF_2205 0a82eab6f1f49e6ac4229b18b5377617 82 PRINTS PR00352 3Fe-4S ferredoxin signature 7 18 5.4E-8 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 BAMF_2205 0a82eab6f1f49e6ac4229b18b5377617 82 PRINTS PR00352 3Fe-4S ferredoxin signature 18 28 5.4E-8 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 BAMF_2205 0a82eab6f1f49e6ac4229b18b5377617 82 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 7 69 7.4E-21 T 12-10-2018 BAMF_0465 18a3cbdd7af84d6fe666d908c70eff08 174 Gene3D G3DSA:3.40.1090.10 1 90 1.4E-6 T 12-10-2018 BAMF_3859 5120d9b1de586b6c95a9a57f7e397ff4 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 7.6E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_3859 5120d9b1de586b6c95a9a57f7e397ff4 236 SMART SM00862 154 230 5.5E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_3859 5120d9b1de586b6c95a9a57f7e397ff4 236 SUPERFAMILY SSF46894 131 231 2.15E-31 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_3859 5120d9b1de586b6c95a9a57f7e397ff4 236 Gene3D G3DSA:1.10.10.10 132 236 2.7E-42 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3859 5120d9b1de586b6c95a9a57f7e397ff4 236 Gene3D G3DSA:3.40.50.2300 2 131 2.9E-40 T 12-10-2018 BAMF_3859 5120d9b1de586b6c95a9a57f7e397ff4 236 SMART SM00448 4 114 4.2E-48 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3859 5120d9b1de586b6c95a9a57f7e397ff4 236 SUPERFAMILY SSF52172 1 126 2.28E-44 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_3859 5120d9b1de586b6c95a9a57f7e397ff4 236 Pfam PF00072 Response regulator receiver domain 6 115 1.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3082 cca678ac9bf9f363fbdafa120c28baa2 129 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 11 94 1.6E-8 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component BAMF_3082 cca678ac9bf9f363fbdafa120c28baa2 129 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 6 125 1.1E-19 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component BAMF_0839 85e48699badafd3ed6cadb99b05b83c3 66 Pfam PF17356 Phage-like element PBSX protein XtrA 10 65 2.8E-19 T 12-10-2018 IPR035530 Phage-like element PBSX protein XtrA BAMF_3360 3c2b605d901bfd2ed16e2a6f89e13cdc 445 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 5.0E-6 T 12-10-2018 BAMF_3360 3c2b605d901bfd2ed16e2a6f89e13cdc 445 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 5.0E-6 T 12-10-2018 BAMF_3360 3c2b605d901bfd2ed16e2a6f89e13cdc 445 PRINTS PR01036 Tetracycline resistance protein TetB signature 103 123 5.0E-6 T 12-10-2018 BAMF_3360 3c2b605d901bfd2ed16e2a6f89e13cdc 445 SUPERFAMILY SSF103473 3 432 8.24E-66 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3360 3c2b605d901bfd2ed16e2a6f89e13cdc 445 Gene3D G3DSA:1.20.1250.20 250 438 8.2E-21 T 12-10-2018 BAMF_3360 3c2b605d901bfd2ed16e2a6f89e13cdc 445 Gene3D G3DSA:1.20.1720.10 9 237 8.9E-51 T 12-10-2018 BAMF_3360 3c2b605d901bfd2ed16e2a6f89e13cdc 445 Pfam PF07690 Major Facilitator Superfamily 263 427 9.9E-16 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_3360 3c2b605d901bfd2ed16e2a6f89e13cdc 445 Pfam PF07690 Major Facilitator Superfamily 13 193 2.9E-35 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_1548 86702b4f15af556ab800f28fc6e43055 110 Pfam PF13490 Putative zinc-finger 19 49 6.3E-6 T 12-10-2018 IPR027383 Putative zinc-finger BAMF_0352 fe82bc69da1cf52ba3927f1da0ad586c 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 1.1E-7 T 12-10-2018 BAMF_0352 fe82bc69da1cf52ba3927f1da0ad586c 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 1.1E-7 T 12-10-2018 BAMF_0352 fe82bc69da1cf52ba3927f1da0ad586c 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 1.1E-7 T 12-10-2018 BAMF_0352 fe82bc69da1cf52ba3927f1da0ad586c 474 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 423 1.1E-105 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BAMF_0352 fe82bc69da1cf52ba3927f1da0ad586c 474 Gene3D G3DSA:1.20.1720.10 15 248 1.7E-41 T 12-10-2018 BAMF_0352 fe82bc69da1cf52ba3927f1da0ad586c 474 SUPERFAMILY SSF103473 11 465 7.59E-63 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0352 fe82bc69da1cf52ba3927f1da0ad586c 474 Pfam PF07690 Major Facilitator Superfamily 20 410 4.5E-52 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0352 fe82bc69da1cf52ba3927f1da0ad586c 474 Gene3D G3DSA:1.20.1250.20 260 473 1.2E-21 T 12-10-2018 BAMF_1583 bcbfadac7114b8fe0c8a322e47d040ee 191 Pfam PF13921 Myb-like DNA-binding domain 9 62 2.6E-5 T 12-10-2018 BAMF_1583 bcbfadac7114b8fe0c8a322e47d040ee 191 SUPERFAMILY SSF46689 7 62 4.76E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_1583 bcbfadac7114b8fe0c8a322e47d040ee 191 Gene3D G3DSA:1.10.10.60 8 82 3.6E-5 T 12-10-2018 BAMF_1583 bcbfadac7114b8fe0c8a322e47d040ee 191 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 4 78 2.6E-44 T 12-10-2018 IPR014243 Transcription factor, RsfA BAMF_0981 743e0b298653be3383e4bdd6ace521f7 277 SUPERFAMILY SSF161098 75 256 1.24E-32 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_0981 743e0b298653be3383e4bdd6ace521f7 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 269 3.7E-28 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_0981 743e0b298653be3383e4bdd6ace521f7 277 Gene3D G3DSA:1.10.3720.10 69 270 2.5E-24 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1195 95285e9476ce489b9b389cd71434f341 385 Gene3D G3DSA:3.90.1150.10 12 366 9.2E-137 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1195 95285e9476ce489b9b389cd71434f341 385 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 4 378 9.5E-159 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BAMF_1195 95285e9476ce489b9b389cd71434f341 385 SUPERFAMILY SSF53383 4 377 7.06E-123 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_1195 95285e9476ce489b9b389cd71434f341 385 Pfam PF00202 Aminotransferase class-III 11 377 4.6E-127 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_1195 95285e9476ce489b9b389cd71434f341 385 PIRSF PIRSF000521 157 380 4.9E-33 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_1195 95285e9476ce489b9b389cd71434f341 385 PIRSF PIRSF000521 105 146 0.023 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_1195 95285e9476ce489b9b389cd71434f341 385 PIRSF PIRSF000521 3 112 1.8E-5 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_1195 95285e9476ce489b9b389cd71434f341 385 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 205 242 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_1195 95285e9476ce489b9b389cd71434f341 385 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 3 380 68.645 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BAMF_1195 95285e9476ce489b9b389cd71434f341 385 Gene3D G3DSA:3.40.640.10 47 287 9.2E-137 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_1685 b073da5f82518c7387ee75eed4958396 305 Pfam PF00589 Phage integrase family 113 287 6.3E-55 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BAMF_1685 b073da5f82518c7387ee75eed4958396 305 Gene3D G3DSA:1.10.443.10 113 295 4.5E-62 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BAMF_1685 b073da5f82518c7387ee75eed4958396 305 SUPERFAMILY SSF56349 8 295 8.24E-59 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BAMF_1685 b073da5f82518c7387ee75eed4958396 305 Gene3D G3DSA:1.10.150.130 4 111 1.4E-22 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal BAMF_1685 b073da5f82518c7387ee75eed4958396 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 92 2.4E-23 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BAMF_1685 b073da5f82518c7387ee75eed4958396 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 301 54.706 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD BAMF_1685 b073da5f82518c7387ee75eed4958396 305 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 11 302 6.1E-112 T 12-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 BAMF_1224 39b0db2fb706384033eb8ca6bea21fe4 218 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 9 181 3.5E-67 T 12-10-2018 IPR022301 Integral membrane protein YjbE BAMF_1224 39b0db2fb706384033eb8ca6bea21fe4 218 Pfam PF03741 Integral membrane protein TerC family 12 179 8.1E-45 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 BAMF_0968 01aa2280630e8ad0ab1839fd74fdeaa1 232 Pfam PF03575 Peptidase family S51 4 197 1.6E-58 T 12-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 BAMF_0968 01aa2280630e8ad0ab1839fd74fdeaa1 232 Gene3D G3DSA:3.40.50.880 19 220 1.4E-41 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_0968 01aa2280630e8ad0ab1839fd74fdeaa1 232 SUPERFAMILY SSF52317 4 199 1.37E-30 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_2795 b3e5a9fc4a4f17103d85cb973d6efa9a 183 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 7 182 2.1E-46 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 BAMF_2795 b3e5a9fc4a4f17103d85cb973d6efa9a 183 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 6 182 21.277 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 BAMF_2795 b3e5a9fc4a4f17103d85cb973d6efa9a 183 Gene3D G3DSA:3.90.1140.10 7 183 2.4E-41 T 12-10-2018 BAMF_2795 b3e5a9fc4a4f17103d85cb973d6efa9a 183 Pfam PF13563 2'-5' RNA ligase superfamily 15 136 6.9E-18 T 12-10-2018 BAMF_2795 b3e5a9fc4a4f17103d85cb973d6efa9a 183 SUPERFAMILY SSF55144 6 182 9.59E-42 T 12-10-2018 IPR009097 Cyclic phosphodiesterase BAMF_3766 11211120f1eee6323c257e2d825259ce 313 Gene3D G3DSA:1.10.10.60 1 51 2.2E-20 T 12-10-2018 BAMF_3766 11211120f1eee6323c257e2d825259ce 313 Pfam PF04198 Putative sugar-binding domain 57 310 1.6E-82 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 BAMF_3766 11211120f1eee6323c257e2d825259ce 313 Pfam PF12802 MarR family 21 53 8.4E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3766 11211120f1eee6323c257e2d825259ce 313 Gene3D G3DSA:3.40.50.1360 52 312 6.9E-88 T 12-10-2018 BAMF_3766 11211120f1eee6323c257e2d825259ce 313 SUPERFAMILY SSF100950 56 311 3.91E-75 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BAMF_3766 11211120f1eee6323c257e2d825259ce 313 SUPERFAMILY SSF88659 14 47 1.37E-6 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_3269 e2c92d472f84753a0c8c0da96c9048ac 238 Hamap MF_02105 Lactate utilization protein A [lutA]. 1 238 63.587 T 12-10-2018 IPR022822 Lactate utilization protein A GO:0006089 BAMF_3269 e2c92d472f84753a0c8c0da96c9048ac 238 Pfam PF02754 Cysteine-rich domain 3 84 1.1E-17 T 12-10-2018 IPR004017 Cysteine-rich domain BAMF_3269 e2c92d472f84753a0c8c0da96c9048ac 238 Pfam PF02754 Cysteine-rich domain 132 215 1.3E-15 T 12-10-2018 IPR004017 Cysteine-rich domain BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 SUPERFAMILY SSF55874 309 450 1.14E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 Gene3D G3DSA:1.10.287.130 237 305 9.7E-15 T 12-10-2018 BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 SMART SM00387 350 451 5.7E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 SMART SM00388 240 306 6.3E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 SUPERFAMILY SSF47384 224 304 2.16E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 446 1.4E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 Gene3D G3DSA:3.30.565.10 311 451 6.2E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 SUPERFAMILY SSF158472 188 236 2.09E-8 T 12-10-2018 BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 450 2.3E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 2.3E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 2.3E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 2.3E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 304 1.4E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 Pfam PF00672 HAMP domain 188 235 2.6E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 SMART SM00304 187 239 4.4E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BAMF_3141 7c3e5b87d6943a680ea5558df8b07581 451 Gene3D G3DSA:1.10.8.500 186 236 1.1E-7 T 12-10-2018 BAMF_2071 0496723a5af28ef24755eb400c70bbf1 144 Gene3D G3DSA:2.170.150.20 1 144 3.3E-63 T 12-10-2018 BAMF_2071 0496723a5af28ef24755eb400c70bbf1 144 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 4 127 37.344 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BAMF_2071 0496723a5af28ef24755eb400c70bbf1 144 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 4 135 1.3E-66 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BAMF_2071 0496723a5af28ef24755eb400c70bbf1 144 Pfam PF01641 SelR domain 10 126 4.0E-49 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BAMF_2071 0496723a5af28ef24755eb400c70bbf1 144 SUPERFAMILY SSF51316 3 143 1.05E-60 T 12-10-2018 IPR011057 Mss4-like superfamily BAMF_0375 5ce8a611000495b6f8a510617eeac690 243 SUPERFAMILY SSF50891 106 235 7.59E-49 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily BAMF_0375 5ce8a611000495b6f8a510617eeac690 243 Gene3D G3DSA:2.40.100.10 103 243 9.3E-61 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily BAMF_0375 5ce8a611000495b6f8a510617eeac690 243 SUPERFAMILY SSF160467 12 110 5.62E-18 T 12-10-2018 BAMF_0375 5ce8a611000495b6f8a510617eeac690 243 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 16 228 1.0E-87 T 12-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 BAMF_0375 5ce8a611000495b6f8a510617eeac690 243 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 11 219 5.8E-76 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D BAMF_0375 5ce8a611000495b6f8a510617eeac690 243 SMART SM00796 10 219 1.3E-102 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D BAMF_0375 5ce8a611000495b6f8a510617eeac690 243 Gene3D G3DSA:3.30.1360.40 5 102 1.6E-26 T 12-10-2018 BAMF_0997 032120cba5ba78952211fb84f64cfb6f 210 Gene3D G3DSA:2.40.30.170 95 210 2.6E-33 T 12-10-2018 BAMF_0997 032120cba5ba78952211fb84f64cfb6f 210 Gene3D G3DSA:2.40.50.100 46 88 1.4E-5 T 12-10-2018 BAMF_0997 032120cba5ba78952211fb84f64cfb6f 210 Pfam PF13437 HlyD family secretion protein 85 201 2.7E-15 T 12-10-2018 BAMF_0997 032120cba5ba78952211fb84f64cfb6f 210 SUPERFAMILY SSF51230 39 111 2.83E-10 T 12-10-2018 IPR011053 Single hybrid motif BAMF_0521 356cb4f4711ebbe625127fed3412160f 193 SUPERFAMILY SSF46689 5 82 4.16E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_0521 356cb4f4711ebbe625127fed3412160f 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.5E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_0521 356cb4f4711ebbe625127fed3412160f 193 Gene3D G3DSA:1.10.357.10 1 193 6.9E-73 T 12-10-2018 BAMF_0521 356cb4f4711ebbe625127fed3412160f 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.3E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_0521 356cb4f4711ebbe625127fed3412160f 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.3E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_0521 356cb4f4711ebbe625127fed3412160f 193 SUPERFAMILY SSF48498 79 191 9.78E-11 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BAMF_3049 fdb80b0ef5c099c2c1bcc082d5b8cc3d 288 Pfam PF04231 Endonuclease I 73 281 8.6E-44 T 12-10-2018 IPR007346 Endonuclease I GO:0004518 BAMF_3049 fdb80b0ef5c099c2c1bcc082d5b8cc3d 288 SUPERFAMILY SSF54060 69 281 3.06E-60 T 12-10-2018 BAMF_2047 6817e049fce16afd66836f6cb06aa3a9 92 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 4 50 5.1E-12 T 12-10-2018 IPR022453 Zinc finger, MqsA-type BAMF_2047 6817e049fce16afd66836f6cb06aa3a9 92 Pfam PF14122 YokU-like protein, putative antitoxin 4 89 1.5E-41 T 12-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU BAMF_2047 6817e049fce16afd66836f6cb06aa3a9 92 TIGRFAM TIGR03829 YokU_near_AblA: uncharacterized protein, YokU family 4 91 2.7E-44 T 12-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU BAMF_2513 ab73c96eb164f23a5213d87e722480ff 132 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 110 5.3E-19 T 12-10-2018 BAMF_2513 ab73c96eb164f23a5213d87e722480ff 132 Gene3D G3DSA:3.30.1240.10 83 113 2.4E-29 T 12-10-2018 BAMF_2513 ab73c96eb164f23a5213d87e722480ff 132 SUPERFAMILY SSF56784 1 114 5.58E-24 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_2513 ab73c96eb164f23a5213d87e722480ff 132 Gene3D G3DSA:3.40.50.1000 6 82 2.4E-29 T 12-10-2018 IPR023214 HAD superfamily BAMF_0050 31b06ddc1c30f1d4b12f7abfc839e068 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BAMF_0050 31b06ddc1c30f1d4b12f7abfc839e068 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 428 7.3E-7 T 12-10-2018 IPR001451 Hexapeptide repeat BAMF_0050 31b06ddc1c30f1d4b12f7abfc839e068 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 300 7.4E-8 T 12-10-2018 IPR001451 Hexapeptide repeat BAMF_0050 31b06ddc1c30f1d4b12f7abfc839e068 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 352 5.6E-9 T 12-10-2018 IPR001451 Hexapeptide repeat BAMF_0050 31b06ddc1c30f1d4b12f7abfc839e068 456 SUPERFAMILY SSF51161 249 446 3.05E-50 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily BAMF_0050 31b06ddc1c30f1d4b12f7abfc839e068 456 Gene3D G3DSA:2.160.10.10 253 439 1.5E-54 T 12-10-2018 BAMF_0050 31b06ddc1c30f1d4b12f7abfc839e068 456 Gene3D G3DSA:3.90.550.10 1 252 9.6E-78 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0050 31b06ddc1c30f1d4b12f7abfc839e068 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 454 4.1E-190 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 BAMF_0050 31b06ddc1c30f1d4b12f7abfc839e068 456 SUPERFAMILY SSF53448 5 253 9.53E-64 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0050 31b06ddc1c30f1d4b12f7abfc839e068 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 452 41.586 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 BAMF_0050 31b06ddc1c30f1d4b12f7abfc839e068 456 Pfam PF00483 Nucleotidyl transferase 6 216 1.1E-22 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BAMF_0562 01f9c7ab6e2b88a94ff60e3608a79706 458 Gene3D G3DSA:3.90.120.10 374 430 6.2E-6 T 12-10-2018 BAMF_0562 01f9c7ab6e2b88a94ff60e3608a79706 458 SUPERFAMILY SSF53335 13 437 2.16E-70 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_0562 01f9c7ab6e2b88a94ff60e3608a79706 458 Gene3D G3DSA:3.40.50.150 12 195 2.5E-43 T 12-10-2018 BAMF_0562 01f9c7ab6e2b88a94ff60e3608a79706 458 Pfam PF00145 C-5 cytosine-specific DNA methylase 13 437 6.6E-27 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BAMF_0562 01f9c7ab6e2b88a94ff60e3608a79706 458 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 175 188 2.7E-9 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BAMF_0562 01f9c7ab6e2b88a94ff60e3608a79706 458 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 12 28 2.7E-9 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BAMF_0562 01f9c7ab6e2b88a94ff60e3608a79706 458 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 117 131 2.7E-9 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BAMF_1389 e2ceec8a25f92ddf507a392e4cfb0086 349 SUPERFAMILY SSF51004 11 347 2.2E-49 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily BAMF_1389 e2ceec8a25f92ddf507a392e4cfb0086 349 Gene3D G3DSA:2.130.10.10 5 349 9.6E-126 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BAMF_1389 e2ceec8a25f92ddf507a392e4cfb0086 349 Pfam PF10282 Lactonase, 7-bladed beta-propeller 7 345 1.4E-129 T 12-10-2018 IPR019405 Lactonase, 7-bladed beta propeller BAMF_2654 14584e422d86b7043d9ae31a2f402580 590 SUPERFAMILY SSF47781 502 589 3.05E-20 T 12-10-2018 IPR010994 RuvA domain 2-like BAMF_2654 14584e422d86b7043d9ae31a2f402580 590 Pfam PF02151 UvrB/uvrC motif 197 229 1.2E-9 T 12-10-2018 IPR001943 UVR domain GO:0005515 BAMF_2654 14584e422d86b7043d9ae31a2f402580 590 Gene3D G3DSA:3.40.1440.10 1 99 1.6E-38 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BAMF_2654 14584e422d86b7043d9ae31a2f402580 590 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 5 569 1.1E-231 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 BAMF_2654 14584e422d86b7043d9ae31a2f402580 590 SUPERFAMILY SSF46600 182 235 1.83E-14 T 12-10-2018 IPR036876 UVR domain superfamily BAMF_2654 14584e422d86b7043d9ae31a2f402580 590 Hamap MF_00203 UvrABC system protein C [uvrC]. 2 587 28.943 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 BAMF_2654 14584e422d86b7043d9ae31a2f402580 590 Pfam PF01541 GIY-YIG catalytic domain 16 90 8.5E-10 T 12-10-2018 IPR000305 GIY-YIG endonuclease BAMF_2654 14584e422d86b7043d9ae31a2f402580 590 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 372 523 7.0E-57 T 12-10-2018 IPR001162 UvrC family homology region BAMF_2654 14584e422d86b7043d9ae31a2f402580 590 Gene3D G3DSA:1.10.150.20 527 588 5.7E-21 T 12-10-2018 BAMF_2654 14584e422d86b7043d9ae31a2f402580 590 SUPERFAMILY SSF82771 14 97 4.58E-21 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BAMF_2654 14584e422d86b7043d9ae31a2f402580 590 SMART SM00465 15 95 1.0E-24 T 12-10-2018 IPR000305 GIY-YIG endonuclease BAMF_2654 14584e422d86b7043d9ae31a2f402580 590 Gene3D G3DSA:3.30.420.340 365 523 4.6E-63 T 12-10-2018 IPR038476 UvrC homology region 2 superfamily BAMF_1345 942d40c83b068933ef7ad6ff935f2552 311 SUPERFAMILY SSF56563 19 293 2.22E-8 T 12-10-2018 BAMF_1345 942d40c83b068933ef7ad6ff935f2552 311 Pfam PF05065 Phage capsid family 20 305 2.8E-22 T 12-10-2018 IPR024455 Phage capsid BAMF_0403 03d7b729eac56d711402b8140c4f98ab 288 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 160 264 3.3E-6 T 12-10-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family BAMF_0403 03d7b729eac56d711402b8140c4f98ab 288 SUPERFAMILY SSF54001 141 285 2.45E-14 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BAMF_3179 750d9b3f4d97bd07e54a10a1d33ad4b9 308 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 53 3.4E-17 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 BAMF_3179 750d9b3f4d97bd07e54a10a1d33ad4b9 308 Gene3D G3DSA:3.40.190.10 162 197 5.6E-7 T 12-10-2018 BAMF_3179 750d9b3f4d97bd07e54a10a1d33ad4b9 308 Pfam PF12728 Helix-turn-helix domain 7 54 2.4E-14 T 12-10-2018 BAMF_3179 750d9b3f4d97bd07e54a10a1d33ad4b9 308 Pfam PF12727 PBP superfamily domain 107 270 3.9E-51 T 12-10-2018 IPR024370 PBP domain BAMF_3179 750d9b3f4d97bd07e54a10a1d33ad4b9 308 SUPERFAMILY SSF53850 122 296 2.17E-12 T 12-10-2018 BAMF_3179 750d9b3f4d97bd07e54a10a1d33ad4b9 308 SUPERFAMILY SSF46955 7 55 1.1E-5 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BAMF_3179 750d9b3f4d97bd07e54a10a1d33ad4b9 308 Gene3D G3DSA:1.10.1660.10 3 55 5.8E-10 T 12-10-2018 BAMF_0288 66970bddf6912a09652cf10a32c31f72 195 SUPERFAMILY SSF103473 13 194 5.36E-45 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0288 66970bddf6912a09652cf10a32c31f72 195 Gene3D G3DSA:1.20.1250.20 3 195 2.7E-44 T 12-10-2018 BAMF_0288 66970bddf6912a09652cf10a32c31f72 195 Pfam PF07690 Major Facilitator Superfamily 28 193 5.1E-34 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_1494 25dff046f544ff9c4078d97b910c1054 236 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 1 235 45.298 T 12-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 BAMF_1494 25dff046f544ff9c4078d97b910c1054 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 91 118 3.5E-4 T 12-10-2018 IPR001451 Hexapeptide repeat BAMF_1494 25dff046f544ff9c4078d97b910c1054 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 156 2.4E-10 T 12-10-2018 IPR001451 Hexapeptide repeat BAMF_1494 25dff046f544ff9c4078d97b910c1054 236 SUPERFAMILY SSF51161 90 223 4.02E-49 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily BAMF_1494 25dff046f544ff9c4078d97b910c1054 236 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 165 198 6.8E-8 T 12-10-2018 IPR001451 Hexapeptide repeat BAMF_1494 25dff046f544ff9c4078d97b910c1054 236 Gene3D G3DSA:2.160.10.10 85 236 3.0E-50 T 12-10-2018 BAMF_1494 25dff046f544ff9c4078d97b910c1054 236 Gene3D G3DSA:3.30.70.250 1 84 8.0E-36 T 12-10-2018 BAMF_1494 25dff046f544ff9c4078d97b910c1054 236 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 6 236 5.4E-118 T 12-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 BAMF_1494 25dff046f544ff9c4078d97b910c1054 236 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 4 87 1.0E-36 T 12-10-2018 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 BAMF_1494 25dff046f544ff9c4078d97b910c1054 236 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 174 202 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BAMF_1954 5600c8f834712274b54ecd56d5930bcb 282 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 10 271 1.6E-82 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BAMF_1954 5600c8f834712274b54ecd56d5930bcb 282 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 168 271 8.1E-33 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BAMF_1954 5600c8f834712274b54ecd56d5930bcb 282 Gene3D G3DSA:3.40.50.720 4 169 6.1E-41 T 12-10-2018 BAMF_1954 5600c8f834712274b54ecd56d5930bcb 282 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 9 105 1.2E-18 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BAMF_1954 5600c8f834712274b54ecd56d5930bcb 282 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 8 272 24.522 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BAMF_1954 5600c8f834712274b54ecd56d5930bcb 282 PIRSF PIRSF000193 7 275 6.3E-73 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BAMF_1954 5600c8f834712274b54ecd56d5930bcb 282 SUPERFAMILY SSF51735 8 166 1.9E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1954 5600c8f834712274b54ecd56d5930bcb 282 Gene3D G3DSA:1.10.3730.10 170 277 3.4E-36 T 12-10-2018 BAMF_1954 5600c8f834712274b54ecd56d5930bcb 282 SUPERFAMILY SSF48179 167 275 2.89E-32 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_0211 c040e46e6a39d61dcd67db3366617e5e 384 Pfam PF02222 ATP-grasp domain 115 286 1.2E-57 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BAMF_0211 c040e46e6a39d61dcd67db3366617e5e 384 Gene3D G3DSA:3.30.1490.20 115 188 2.5E-30 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BAMF_0211 c040e46e6a39d61dcd67db3366617e5e 384 Gene3D G3DSA:3.30.470.20 189 382 1.4E-59 T 12-10-2018 BAMF_0211 c040e46e6a39d61dcd67db3366617e5e 384 SUPERFAMILY SSF52440 4 104 4.6E-29 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BAMF_0211 c040e46e6a39d61dcd67db3366617e5e 384 Gene3D G3DSA:3.40.50.20 1 114 2.7E-48 T 12-10-2018 BAMF_0211 c040e46e6a39d61dcd67db3366617e5e 384 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 6 383 2.0E-187 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 BAMF_0211 c040e46e6a39d61dcd67db3366617e5e 384 SUPERFAMILY SSF56059 113 377 8.13E-57 T 12-10-2018 BAMF_0211 c040e46e6a39d61dcd67db3366617e5e 384 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 1 384 51.511 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 BAMF_1773 c7a0044157d60ceca1c20eda0580cf03 509 Pfam PF04055 Radical SAM superfamily 215 386 1.3E-33 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BAMF_1773 c7a0044157d60ceca1c20eda0580cf03 509 Pfam PF01938 TRAM domain 441 500 1.2E-16 T 12-10-2018 IPR002792 TRAM domain BAMF_1773 c7a0044157d60ceca1c20eda0580cf03 509 SUPERFAMILY SSF102114 198 434 2.49E-63 T 12-10-2018 BAMF_1773 c7a0044157d60ceca1c20eda0580cf03 509 Gene3D G3DSA:3.80.30.20 210 443 3.6E-91 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BAMF_1773 c7a0044157d60ceca1c20eda0580cf03 509 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 66 503 74.685 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 BAMF_1773 c7a0044157d60ceca1c20eda0580cf03 509 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 215 235 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 BAMF_1773 c7a0044157d60ceca1c20eda0580cf03 509 Gene3D G3DSA:3.40.50.12160 66 201 2.6E-35 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily BAMF_1773 c7a0044157d60ceca1c20eda0580cf03 509 SMART SM00729 211 429 6.4E-63 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BAMF_1773 c7a0044157d60ceca1c20eda0580cf03 509 Pfam PF00919 Uncharacterized protein family UPF0004 67 168 1.7E-29 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 BAMF_1773 c7a0044157d60ceca1c20eda0580cf03 509 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 67 499 4.6E-167 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 BAMF_1773 c7a0044157d60ceca1c20eda0580cf03 509 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 67 501 1.8E-220 T 12-10-2018 BAMF_3307 427e44cf30f7678fc341bd7ac80a383e 324 SUPERFAMILY SSF47413 2 61 9.01E-20 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_3307 427e44cf30f7678fc341bd7ac80a383e 324 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 1.5E-21 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_3307 427e44cf30f7678fc341bd7ac80a383e 324 SMART SM00354 2 72 9.5E-34 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_3307 427e44cf30f7678fc341bd7ac80a383e 324 SUPERFAMILY SSF53822 59 318 1.94E-64 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BAMF_3307 427e44cf30f7678fc341bd7ac80a383e 324 Pfam PF13377 Periplasmic binding protein-like domain 166 324 4.0E-24 T 12-10-2018 BAMF_3307 427e44cf30f7678fc341bd7ac80a383e 324 Gene3D G3DSA:1.10.260.40 1 60 2.3E-23 T 12-10-2018 BAMF_3307 427e44cf30f7678fc341bd7ac80a383e 324 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 BAMF_3307 427e44cf30f7678fc341bd7ac80a383e 324 Gene3D G3DSA:3.40.50.2300 63 304 2.8E-64 T 12-10-2018 BAMF_3307 427e44cf30f7678fc341bd7ac80a383e 324 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.2E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_3307 427e44cf30f7678fc341bd7ac80a383e 324 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.2E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_3307 427e44cf30f7678fc341bd7ac80a383e 324 Gene3D G3DSA:3.40.50.2300 157 283 2.8E-64 T 12-10-2018 BAMF_2309 45f133065691b0384dcd83728127bac0 301 ProSitePatterns PS00161 Isocitrate lyase signature. 127 132 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 BAMF_2309 45f133065691b0384dcd83728127bac0 301 SUPERFAMILY SSF51621 10 294 8.07E-98 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BAMF_2309 45f133065691b0384dcd83728127bac0 301 Pfam PF13714 Phosphoenolpyruvate phosphomutase 22 258 4.5E-54 T 12-10-2018 BAMF_2309 45f133065691b0384dcd83728127bac0 301 Gene3D G3DSA:3.20.20.60 1 301 1.9E-110 T 12-10-2018 BAMF_2309 45f133065691b0384dcd83728127bac0 301 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 16 295 2.8E-126 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 BAMF_2309 45f133065691b0384dcd83728127bac0 301 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 12 296 46.551 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 BAMF_1294 6e528bde18c823108b2406a70f34866f 568 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 467 543 3.0E-12 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BAMF_1294 6e528bde18c823108b2406a70f34866f 568 SUPERFAMILY SSF52794 466 565 1.67E-14 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BAMF_1294 6e528bde18c823108b2406a70f34866f 568 Gene3D G3DSA:3.40.50.2300 461 567 1.1E-29 T 12-10-2018 BAMF_1294 6e528bde18c823108b2406a70f34866f 568 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 441 561 1.7E-33 T 12-10-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 BAMF_1294 6e528bde18c823108b2406a70f34866f 568 Pfam PF02378 Phosphotransferase system, EIIC 28 347 8.3E-55 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BAMF_3870 52d430ff36413ada35d95ad07533c405 229 Pfam PF02585 GlcNAc-PI de-N-acetylase 19 132 4.8E-16 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 BAMF_3870 52d430ff36413ada35d95ad07533c405 229 Gene3D G3DSA:3.40.50.10320 15 228 5.6E-49 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 BAMF_3870 52d430ff36413ada35d95ad07533c405 229 SUPERFAMILY SSF102588 18 225 4.32E-38 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 BAMF_1004 74b3fbf6cb438d83fa5fbed9ea993272 305 SMART SM00382 29 209 5.3E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1004 74b3fbf6cb438d83fa5fbed9ea993272 305 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_1004 74b3fbf6cb438d83fa5fbed9ea993272 305 Pfam PF00005 ABC transporter 21 161 4.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1004 74b3fbf6cb438d83fa5fbed9ea993272 305 SUPERFAMILY SSF52540 3 224 5.86E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1004 74b3fbf6cb438d83fa5fbed9ea993272 305 Gene3D G3DSA:3.40.50.300 2 235 2.0E-59 T 12-10-2018 BAMF_3148 03ceee4e49b83eb1c72bc9dff9179308 370 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 366 1.5E-91 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 BAMF_3148 03ceee4e49b83eb1c72bc9dff9179308 370 Gene3D G3DSA:3.10.450.290 22 89 7.7E-10 T 12-10-2018 BAMF_3148 03ceee4e49b83eb1c72bc9dff9179308 370 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 201 364 6.0E-24 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 BAMF_3148 03ceee4e49b83eb1c72bc9dff9179308 370 Gene3D G3DSA:3.30.300.210 217 367 1.0E-38 T 12-10-2018 IPR038501 Spore germination GerAC superfamily BAMF_0456 4d8e1edcf757eb5210e9f42f43d5e83f 167 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 141 9.5E-33 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type BAMF_0456 4d8e1edcf757eb5210e9f42f43d5e83f 167 Gene3D G3DSA:1.10.10.10 1 154 3.8E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0456 4d8e1edcf757eb5210e9f42f43d5e83f 167 SUPERFAMILY SSF46785 3 145 2.45E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0456 4d8e1edcf757eb5210e9f42f43d5e83f 167 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site BAMF_0456 4d8e1edcf757eb5210e9f42f43d5e83f 167 Pfam PF02082 Transcriptional regulator 1 83 1.6E-27 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type BAMF_1728 49013cb95fc68de953200df9e0524eda 420 SUPERFAMILY SSF50156 173 267 1.58E-18 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BAMF_1728 49013cb95fc68de953200df9e0524eda 420 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 419 4.4E-155 T 12-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 BAMF_1728 49013cb95fc68de953200df9e0524eda 420 Pfam PF13180 PDZ domain 208 265 2.3E-6 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_1728 49013cb95fc68de953200df9e0524eda 420 Gene3D G3DSA:2.30.42.10 201 288 5.0E-19 T 12-10-2018 BAMF_1728 49013cb95fc68de953200df9e0524eda 420 SMART SM00228 188 258 0.0012 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_1728 49013cb95fc68de953200df9e0524eda 420 Pfam PF02163 Peptidase family M50 6 406 1.6E-83 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 BAMF_2373 ba31b4098c4c021a64565faf81d65c49 102 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 8.9E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site BAMF_2373 ba31b4098c4c021a64565faf81d65c49 102 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 30 5.1E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site BAMF_2373 ba31b4098c4c021a64565faf81d65c49 102 Gene3D G3DSA:3.30.700.10 10 101 1.4E-8 T 12-10-2018 BAMF_2373 ba31b4098c4c021a64565faf81d65c49 102 SUPERFAMILY SSF54523 10 83 1.65E-12 T 12-10-2018 BAMF_2373 ba31b4098c4c021a64565faf81d65c49 102 PIRSF PIRSF029928 1 101 1.8E-33 T 12-10-2018 IPR016940 ComG operon protein C GO:0030420 BAMF_0515 215d5536641df87adb08c6ac5cbd1734 386 Gene3D G3DSA:1.20.1250.20 3 187 4.5E-28 T 12-10-2018 BAMF_0515 215d5536641df87adb08c6ac5cbd1734 386 SUPERFAMILY SSF103473 5 379 1.12E-57 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0515 215d5536641df87adb08c6ac5cbd1734 386 Gene3D G3DSA:1.20.1250.20 197 383 7.8E-18 T 12-10-2018 BAMF_0515 215d5536641df87adb08c6ac5cbd1734 386 Pfam PF07690 Major Facilitator Superfamily 10 320 1.1E-37 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0836 ea89784d13be323f2271c33072457eaa 442 Pfam PF03796 DnaB-like helicase C terminal domain 173 435 9.6E-102 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 BAMF_0836 ea89784d13be323f2271c33072457eaa 442 Gene3D G3DSA:1.10.860.10 1 144 1.0E-38 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BAMF_0836 ea89784d13be323f2271c33072457eaa 442 SUPERFAMILY SSF52540 171 434 1.57E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0836 ea89784d13be323f2271c33072457eaa 442 Gene3D G3DSA:3.40.50.300 149 442 3.7E-106 T 12-10-2018 BAMF_0836 ea89784d13be323f2271c33072457eaa 442 SMART SM00382 190 386 0.0088 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0836 ea89784d13be323f2271c33072457eaa 442 Pfam PF00772 DnaB-like helicase N terminal domain 8 103 2.6E-18 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 BAMF_0836 ea89784d13be323f2271c33072457eaa 442 SUPERFAMILY SSF48024 7 111 5.49E-20 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 BAMF_0836 ea89784d13be323f2271c33072457eaa 442 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 8 437 5.8E-136 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 BAMF_3430 e3aacf6011e4b5144dce56ece6679188 393 Pfam PF08245 Mur ligase middle domain 37 200 4.0E-9 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BAMF_3430 e3aacf6011e4b5144dce56ece6679188 393 SUPERFAMILY SSF53623 33 235 3.53E-18 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BAMF_3430 e3aacf6011e4b5144dce56ece6679188 393 Gene3D G3DSA:3.40.1190.10 30 238 1.0E-16 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BAMF_3430 e3aacf6011e4b5144dce56ece6679188 393 TIGRFAM TIGR04012 poly_gGlu_PgsB: poly-gamma-glutamate synthase PgsB 2 383 6.0E-172 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BAMF_3430 e3aacf6011e4b5144dce56ece6679188 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 111 126 5.2E-106 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BAMF_3430 e3aacf6011e4b5144dce56ece6679188 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 57 74 5.2E-106 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BAMF_3430 e3aacf6011e4b5144dce56ece6679188 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 196 213 5.2E-106 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BAMF_3430 e3aacf6011e4b5144dce56ece6679188 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 140 155 5.2E-106 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BAMF_3430 e3aacf6011e4b5144dce56ece6679188 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 258 275 5.2E-106 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BAMF_3430 e3aacf6011e4b5144dce56ece6679188 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 362 378 5.2E-106 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BAMF_3430 e3aacf6011e4b5144dce56ece6679188 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 293 308 5.2E-106 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BAMF_3430 e3aacf6011e4b5144dce56ece6679188 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 162 179 5.2E-106 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BAMF_3430 e3aacf6011e4b5144dce56ece6679188 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 34 50 5.2E-106 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BAMF_3430 e3aacf6011e4b5144dce56ece6679188 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 77 95 5.2E-106 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BAMF_2042 f3aa1d00fe1295d3391e8ab4f96afb58 57 ProDom PD052277 YOZD 1 56 7.0E-21 T 12-10-2018 BAMF_2042 f3aa1d00fe1295d3391e8ab4f96afb58 57 Pfam PF14162 YozD-like protein 1 57 1.8E-31 T 12-10-2018 IPR025545 YozD-like protein BAMF_2168 a7b6bd2cc206eed9e32d2b425ef8af22 338 Gene3D G3DSA:3.40.1030.10 71 314 1.5E-118 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_2168 a7b6bd2cc206eed9e32d2b425ef8af22 338 SUPERFAMILY SSF52418 71 332 1.44E-86 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_2168 a7b6bd2cc206eed9e32d2b425ef8af22 338 Pfam PF00591 Glycosyl transferase family, a/b domain 71 322 6.3E-98 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_2168 a7b6bd2cc206eed9e32d2b425ef8af22 338 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 332 37.215 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 BAMF_2168 a7b6bd2cc206eed9e32d2b425ef8af22 338 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 331 4.1E-129 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 BAMF_2168 a7b6bd2cc206eed9e32d2b425ef8af22 338 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 64 2.2E-12 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_2168 a7b6bd2cc206eed9e32d2b425ef8af22 338 SUPERFAMILY SSF47648 1 65 2.35E-14 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BAMF_2168 a7b6bd2cc206eed9e32d2b425ef8af22 338 Gene3D G3DSA:1.20.970.10 6 181 1.5E-118 T 12-10-2018 BAMF_0236 c6f112103292a0b2d445323ba42ee11c 142 Gene3D G3DSA:1.10.10.2520 8 91 1.2E-13 T 12-10-2018 BAMF_0236 c6f112103292a0b2d445323ba42ee11c 142 Pfam PF07486 Cell Wall Hydrolase 24 128 1.2E-19 T 12-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 BAMF_0069 6e3bb8118e08b6d13af7a511f75b5c0a 639 Gene3D G3DSA:3.40.50.300 147 330 6.7E-70 T 12-10-2018 BAMF_0069 6e3bb8118e08b6d13af7a511f75b5c0a 639 ProSitePatterns PS00674 AAA-protein family signature. 300 318 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 BAMF_0069 6e3bb8118e08b6d13af7a511f75b5c0a 639 Pfam PF01434 Peptidase family M41 391 600 4.5E-90 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 BAMF_0069 6e3bb8118e08b6d13af7a511f75b5c0a 639 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 109 601 1.2E-248 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 BAMF_0069 6e3bb8118e08b6d13af7a511f75b5c0a 639 Gene3D G3DSA:1.20.58.760 411 617 2.2E-77 T 12-10-2018 BAMF_0069 6e3bb8118e08b6d13af7a511f75b5c0a 639 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 609 38.796 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 BAMF_0069 6e3bb8118e08b6d13af7a511f75b5c0a 639 SMART SM00382 193 332 1.3E-23 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0069 6e3bb8118e08b6d13af7a511f75b5c0a 639 SUPERFAMILY SSF52540 151 401 1.88E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0069 6e3bb8118e08b6d13af7a511f75b5c0a 639 Pfam PF06480 FtsH Extracellular 9 99 3.2E-11 T 12-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 BAMF_0069 6e3bb8118e08b6d13af7a511f75b5c0a 639 Gene3D G3DSA:1.10.8.60 331 408 4.7E-30 T 12-10-2018 BAMF_0069 6e3bb8118e08b6d13af7a511f75b5c0a 639 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 197 329 5.8E-44 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BAMF_0069 6e3bb8118e08b6d13af7a511f75b5c0a 639 SUPERFAMILY SSF140990 411 607 4.58E-74 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 BAMF_3793 2b5cb917120eb9e7023b542e36f63aef 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_3793 2b5cb917120eb9e7023b542e36f63aef 273 SUPERFAMILY SSF51735 6 256 4.53E-85 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3793 2b5cb917120eb9e7023b542e36f63aef 273 Gene3D G3DSA:3.40.50.720 1 267 1.4E-86 T 12-10-2018 BAMF_3793 2b5cb917120eb9e7023b542e36f63aef 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 1.8E-72 T 12-10-2018 BAMF_3793 2b5cb917120eb9e7023b542e36f63aef 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.7E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3793 2b5cb917120eb9e7023b542e36f63aef 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.7E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3793 2b5cb917120eb9e7023b542e36f63aef 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 6.7E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3793 2b5cb917120eb9e7023b542e36f63aef 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.7E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3793 2b5cb917120eb9e7023b542e36f63aef 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.7E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3793 2b5cb917120eb9e7023b542e36f63aef 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.7E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3793 2b5cb917120eb9e7023b542e36f63aef 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3793 2b5cb917120eb9e7023b542e36f63aef 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 6.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_3793 2b5cb917120eb9e7023b542e36f63aef 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 6.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_0413 591fec23f543f44a5c30bd183854620d 135 ProDom PD082409 MEMBRANE YVAD TRANSMEMBRANE 2 110 5.0E-32 T 12-10-2018 IPR020348 Uncharacterised protein family YvaD BAMF_0413 591fec23f543f44a5c30bd183854620d 135 Pfam PF17314 Family of unknown function (DUF5360) 5 129 3.4E-58 T 12-10-2018 IPR020348 Uncharacterised protein family YvaD BAMF_0817 09a887ca082af37478dc9581ab75a376 175 SMART SM00287 45 108 9.6E-13 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_0817 09a887ca082af37478dc9581ab75a376 175 SMART SM00287 115 175 11.0 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_0817 09a887ca082af37478dc9581ab75a376 175 Pfam PF08239 Bacterial SH3 domain 54 104 1.5E-9 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_0817 09a887ca082af37478dc9581ab75a376 175 Gene3D G3DSA:2.30.30.40 42 106 3.5E-11 T 12-10-2018 BAMF_2040 ee4fd7924528b37886e3fe44526a6bcd 106 ProDom PD030115 YODL GK1575 3 104 7.0E-44 T 12-10-2018 BAMF_2040 ee4fd7924528b37886e3fe44526a6bcd 106 Pfam PF14191 YodL-like 27 98 2.0E-7 T 12-10-2018 IPR025923 YodL-like BAMF_3195 cb7c12c1095834751fa1071aa8a3d28e 139 PIRSF PIRSF036659 1 139 9.1E-60 T 12-10-2018 IPR012187 Disulphide bond formation protein BdbC BAMF_3195 cb7c12c1095834751fa1071aa8a3d28e 139 Gene3D G3DSA:1.20.1550.10 1 111 9.2E-10 T 12-10-2018 IPR023380 DsbB-like superfamily BAMF_3195 cb7c12c1095834751fa1071aa8a3d28e 139 SUPERFAMILY SSF158442 8 131 6.93E-30 T 12-10-2018 IPR023380 DsbB-like superfamily BAMF_3195 cb7c12c1095834751fa1071aa8a3d28e 139 Hamap MF_00287 Probable disulfide formation protein [bdbC]. 1 136 24.607 T 12-10-2018 IPR012187 Disulphide bond formation protein BdbC BAMF_3195 cb7c12c1095834751fa1071aa8a3d28e 139 Pfam PF02600 Disulfide bond formation protein DsbB 12 128 4.5E-8 T 12-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 BAMF_2494 c5ce53aee66d4b72c93d76437394295a 232 SUPERFAMILY SSF53681 119 226 5.07E-35 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_2494 c5ce53aee66d4b72c93d76437394295a 232 SUPERFAMILY SSF53681 1 114 7.85E-37 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_2494 c5ce53aee66d4b72c93d76437394295a 232 Gene3D G3DSA:3.40.50.1860 4 223 1.8E-84 T 12-10-2018 BAMF_2494 c5ce53aee66d4b72c93d76437394295a 232 Gene3D G3DSA:3.40.50.1860 104 214 1.8E-84 T 12-10-2018 BAMF_2494 c5ce53aee66d4b72c93d76437394295a 232 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 5.0E-78 T 12-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 BAMF_2494 c5ce53aee66d4b72c93d76437394295a 232 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 2.0E-59 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_2494 c5ce53aee66d4b72c93d76437394295a 232 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_3667 cdb508db6b0be0ba0796e5bd5d195510 272 SUPERFAMILY SSF53613 9 263 4.68E-57 T 12-10-2018 IPR029056 Ribokinase-like BAMF_3667 cdb508db6b0be0ba0796e5bd5d195510 272 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 10 259 3.4E-100 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_3667 cdb508db6b0be0ba0796e5bd5d195510 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 2.3E-43 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_3667 cdb508db6b0be0ba0796e5bd5d195510 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 164 181 2.3E-43 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_3667 cdb508db6b0be0ba0796e5bd5d195510 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 2.3E-43 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_3667 cdb508db6b0be0ba0796e5bd5d195510 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 2.3E-43 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_3667 cdb508db6b0be0ba0796e5bd5d195510 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 2.3E-43 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_3667 cdb508db6b0be0ba0796e5bd5d195510 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 2.3E-43 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_3667 cdb508db6b0be0ba0796e5bd5d195510 272 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 264 33.723 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_3667 cdb508db6b0be0ba0796e5bd5d195510 272 PIRSF PIRSF000513 4 269 6.3E-98 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_3667 cdb508db6b0be0ba0796e5bd5d195510 272 Gene3D G3DSA:3.40.1190.20 1 272 1.2E-99 T 12-10-2018 IPR029056 Ribokinase-like BAMF_3667 cdb508db6b0be0ba0796e5bd5d195510 272 Pfam PF02110 Hydroxyethylthiazole kinase family 10 257 1.2E-96 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_3642 cec9622aa59a1869dd99b9b633945642 309 Gene3D G3DSA:1.10.10.10 1 61 1.7E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3642 cec9622aa59a1869dd99b9b633945642 309 Pfam PF13280 WYL domain 133 304 1.2E-33 T 12-10-2018 IPR026881 WYL domain BAMF_3642 cec9622aa59a1869dd99b9b633945642 309 PIRSF PIRSF016838 1 309 8.5E-26 T 12-10-2018 IPR028349 Protein PafC BAMF_3642 cec9622aa59a1869dd99b9b633945642 309 Pfam PF08279 HTH domain 5 56 2.3E-15 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BAMF_3642 cec9622aa59a1869dd99b9b633945642 309 SUPERFAMILY SSF46785 4 59 5.16E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0117 c2ec02f350c13553ca82549a9b941b68 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 6.1E-73 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 BAMF_0117 c2ec02f350c13553ca82549a9b941b68 207 Gene3D G3DSA:3.40.1370.10 3 207 4.5E-83 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 BAMF_0117 c2ec02f350c13553ca82549a9b941b68 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 37.893 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0117 c2ec02f350c13553ca82549a9b941b68 207 SUPERFAMILY SSF52166 1 206 4.06E-84 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 BAMF_0117 c2ec02f350c13553ca82549a9b941b68 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 1.6E-83 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2069 86d417140b3737d851e2ff612e289639 541 Pfam PF13408 Recombinase zinc beta ribbon domain 314 374 1.3E-5 T 12-10-2018 IPR025827 Recombinase zinc beta ribbon domain BAMF_2069 86d417140b3737d851e2ff612e289639 541 Gene3D G3DSA:3.40.50.1390 13 148 1.8E-11 T 12-10-2018 BAMF_2069 86d417140b3737d851e2ff612e289639 541 Gene3D G3DSA:1.10.10.2600 151 300 5.7E-22 T 12-10-2018 IPR038109 DNA-binding recombinase domain superfamily BAMF_2069 86d417140b3737d851e2ff612e289639 541 Pfam PF00239 Resolvase, N terminal domain 16 167 2.7E-14 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BAMF_2069 86d417140b3737d851e2ff612e289639 541 SUPERFAMILY SSF53041 15 167 2.75E-16 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BAMF_2069 86d417140b3737d851e2ff612e289639 541 Pfam PF07508 Recombinase 190 297 4.9E-24 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 BAMF_2069 86d417140b3737d851e2ff612e289639 541 SMART SM00857 15 167 6.8E-14 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BAMF_1520 f6e7c6c6719efc844dafb56d547a1738 44 Pfam PF17447 Uncharacterized protein YkpC 29 42 2.7E-7 T 12-10-2018 IPR035379 Uncharacterized protein YkpC BAMF_1520 f6e7c6c6719efc844dafb56d547a1738 44 ProDom PD049302 YKPC PRECURSOR SIGNAL 1 42 1.0E-6 T 12-10-2018 IPR035379 Uncharacterized protein YkpC BAMF_1270 48e1b6b1332ac4e66d7431554a18f747 185 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 42 130 1.9E-9 T 12-10-2018 IPR018958 Knr4/Smi1-like domain BAMF_1270 48e1b6b1332ac4e66d7431554a18f747 185 Gene3D G3DSA:3.40.1580.10 38 173 4.2E-13 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily BAMF_1270 48e1b6b1332ac4e66d7431554a18f747 185 SMART SM00860 42 161 1.2E-8 T 12-10-2018 IPR018958 Knr4/Smi1-like domain BAMF_1270 48e1b6b1332ac4e66d7431554a18f747 185 SUPERFAMILY SSF160631 38 176 2.49E-15 T 12-10-2018 BAMF_3911 fa1ccc31d63b8dc996afd2e5a73b778b 136 SUPERFAMILY SSF55729 1 134 5.15E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_3911 fa1ccc31d63b8dc996afd2e5a73b778b 136 Gene3D G3DSA:3.40.630.30 1 135 1.5E-29 T 12-10-2018 BAMF_3911 fa1ccc31d63b8dc996afd2e5a73b778b 136 Pfam PF00583 Acetyltransferase (GNAT) family 32 133 4.2E-15 T 12-10-2018 IPR000182 GNAT domain BAMF_3481 647e574cde2d2932f4e8c395eea44244 354 Gene3D G3DSA:1.25.40.10 2 353 1.3E-74 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_3481 647e574cde2d2932f4e8c395eea44244 354 SUPERFAMILY SSF48452 77 279 1.67E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_3481 647e574cde2d2932f4e8c395eea44244 354 Pfam PF13424 Tetratricopeptide repeat 176 238 8.2E-8 T 12-10-2018 BAMF_2041 8b910440a0bc685fb0d471892fd1b3b4 203 Gene3D G3DSA:1.20.144.10 3 109 5.2E-9 T 12-10-2018 BAMF_2041 8b910440a0bc685fb0d471892fd1b3b4 203 Gene3D G3DSA:1.20.144.10 110 203 2.1E-25 T 12-10-2018 BAMF_2041 8b910440a0bc685fb0d471892fd1b3b4 203 SUPERFAMILY SSF48317 7 199 2.62E-35 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BAMF_2041 8b910440a0bc685fb0d471892fd1b3b4 203 Pfam PF01569 PAP2 superfamily 89 193 1.5E-19 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BAMF_2041 8b910440a0bc685fb0d471892fd1b3b4 203 SMART SM00014 78 191 8.3E-21 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BAMF_2827 c2c8331a3ea90e755361d173b8ba76eb 307 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 149 161 2.1E-39 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BAMF_2827 c2c8331a3ea90e755361d173b8ba76eb 307 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 240 259 2.1E-39 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BAMF_2827 c2c8331a3ea90e755361d173b8ba76eb 307 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 72 86 2.1E-39 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BAMF_2827 c2c8331a3ea90e755361d173b8ba76eb 307 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 220 234 2.1E-39 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BAMF_2827 c2c8331a3ea90e755361d173b8ba76eb 307 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 132 146 2.1E-39 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BAMF_2827 c2c8331a3ea90e755361d173b8ba76eb 307 Pfam PF12679 ABC-2 family transporter protein 51 236 7.1E-8 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 BAMF_1116 5be564e70c9210b4761ea992e893648a 513 Gene3D G3DSA:3.30.300.310 414 513 6.6E-34 T 12-10-2018 BAMF_1116 5be564e70c9210b4761ea992e893648a 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_1116 5be564e70c9210b4761ea992e893648a 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 427 501 6.1E-21 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_1116 5be564e70c9210b4761ea992e893648a 513 SUPERFAMILY SSF56801 2 511 1.23E-162 T 12-10-2018 BAMF_1116 5be564e70c9210b4761ea992e893648a 513 Pfam PF00501 AMP-binding enzyme 7 418 3.3E-117 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_1116 5be564e70c9210b4761ea992e893648a 513 PRINTS PR00154 AMP-binding signature 168 179 6.9E-5 T 12-10-2018 IPR020459 AMP-binding BAMF_1116 5be564e70c9210b4761ea992e893648a 513 PRINTS PR00154 AMP-binding signature 180 188 6.9E-5 T 12-10-2018 IPR020459 AMP-binding BAMF_1116 5be564e70c9210b4761ea992e893648a 513 Gene3D G3DSA:3.40.50.12780 1 411 5.8E-129 T 12-10-2018 BAMF_2866 84f44547b3e4c99ed3d5949ec9062a47 193 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 10 187 2.7E-58 T 12-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 BAMF_2866 84f44547b3e4c99ed3d5949ec9062a47 193 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 8 189 2.7E-63 T 12-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 BAMF_2866 84f44547b3e4c99ed3d5949ec9062a47 193 Gene3D G3DSA:1.10.1760.20 5 190 1.0E-57 T 12-10-2018 BAMF_0661 e4e5f5daea10a166e738a2016c1e5913 492 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 4 488 3.9E-228 T 12-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 BAMF_0661 e4e5f5daea10a166e738a2016c1e5913 492 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 413 433 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site BAMF_0661 e4e5f5daea10a166e738a2016c1e5913 492 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 431 2.4E-94 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BAMF_0661 e4e5f5daea10a166e738a2016c1e5913 492 Pfam PF00474 Sodium:solute symporter family 33 431 2.2E-106 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BAMF_0661 e4e5f5daea10a166e738a2016c1e5913 492 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site BAMF_0661 e4e5f5daea10a166e738a2016c1e5913 492 Gene3D G3DSA:1.20.1730.10 20 492 1.4E-92 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily BAMF_0011 287e04bbb9152b1c902c376bb152052d 294 SUPERFAMILY SSF51366 18 269 2.68E-70 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BAMF_0011 287e04bbb9152b1c902c376bb152052d 294 PIRSF PIRSF029271 1 294 1.4E-153 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BAMF_0011 287e04bbb9152b1c902c376bb152052d 294 Gene3D G3DSA:3.20.20.70 1 294 1.1E-148 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_0011 287e04bbb9152b1c902c376bb152052d 294 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 9 294 2.3E-160 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BAMF_0011 287e04bbb9152b1c902c376bb152052d 294 Pfam PF01680 SOR/SNZ family 8 212 1.3E-106 T 12-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BAMF_0011 287e04bbb9152b1c902c376bb152052d 294 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 4 294 53.773 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BAMF_0011 287e04bbb9152b1c902c376bb152052d 294 ProSitePatterns PS01235 PdxS/SNZ family signature. 205 223 - T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BAMF_3334 3fd90bc84329b24cf3c86af2110667b2 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 6 237 4.7E-84 T 12-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 BAMF_3334 3fd90bc84329b24cf3c86af2110667b2 245 Pfam PF00977 Histidine biosynthesis protein 6 234 5.3E-75 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 BAMF_3334 3fd90bc84329b24cf3c86af2110667b2 245 Gene3D G3DSA:3.20.20.70 1 243 4.7E-87 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_3334 3fd90bc84329b24cf3c86af2110667b2 245 SUPERFAMILY SSF51366 5 239 8.63E-67 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BAMF_3334 3fd90bc84329b24cf3c86af2110667b2 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 5 241 36.404 T 12-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 BAMF_2211 65ff41a15f583a9c2abf85e10ac68ff8 240 SMART SM00862 158 235 7.4E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_2211 65ff41a15f583a9c2abf85e10ac68ff8 240 SUPERFAMILY SSF52172 6 193 2.7E-44 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_2211 65ff41a15f583a9c2abf85e10ac68ff8 240 Pfam PF00072 Response regulator receiver domain 9 117 3.5E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2211 65ff41a15f583a9c2abf85e10ac68ff8 240 SMART SM00448 7 117 1.6E-47 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2211 65ff41a15f583a9c2abf85e10ac68ff8 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 235 1.3E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_2211 65ff41a15f583a9c2abf85e10ac68ff8 240 Gene3D G3DSA:1.10.10.10 138 239 9.8E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2211 65ff41a15f583a9c2abf85e10ac68ff8 240 Gene3D G3DSA:3.40.50.2300 1 134 6.3E-42 T 12-10-2018 BAMF_2238 36a1449f4a355b6911f678977267e78c 150 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 24 141 3.3E-42 T 12-10-2018 IPR005562 SpoVA BAMF_2238 36a1449f4a355b6911f678977267e78c 150 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 7 143 4.0E-66 T 12-10-2018 IPR014203 Sporulation stage V, protein AC BAMF_2368 fc26b3928f350d8ff5daa93c46a6ebd6 109 Gene3D G3DSA:3.10.450.390 23 109 1.8E-31 T 12-10-2018 BAMF_2368 fc26b3928f350d8ff5daa93c46a6ebd6 109 Pfam PF13028 Protein of unknown function (DUF3889) 25 106 3.7E-28 T 12-10-2018 IPR024987 Protein of unknown function DUF3889 BAMF_2558 9c32bf444c7c2c00c9d8ee11a7a94895 792 Pfam PF13538 UvrD-like helicase C-terminal domain 676 724 4.5E-18 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain BAMF_2558 9c32bf444c7c2c00c9d8ee11a7a94895 792 Pfam PF13604 AAA domain 341 549 2.6E-50 T 12-10-2018 BAMF_2558 9c32bf444c7c2c00c9d8ee11a7a94895 792 Gene3D G3DSA:3.40.50.300 512 740 1.7E-142 T 12-10-2018 BAMF_2558 9c32bf444c7c2c00c9d8ee11a7a94895 792 SMART SM00382 354 508 7.6E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2558 9c32bf444c7c2c00c9d8ee11a7a94895 792 Gene3D G3DSA:3.40.50.300 333 746 1.7E-142 T 12-10-2018 BAMF_2558 9c32bf444c7c2c00c9d8ee11a7a94895 792 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 9 753 29.859 T 12-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 BAMF_2558 9c32bf444c7c2c00c9d8ee11a7a94895 792 Gene3D G3DSA:2.30.30.940 598 677 1.7E-142 T 12-10-2018 BAMF_2558 9c32bf444c7c2c00c9d8ee11a7a94895 792 Gene3D G3DSA:1.10.150.20 84 151 4.1E-5 T 12-10-2018 BAMF_2558 9c32bf444c7c2c00c9d8ee11a7a94895 792 Pfam PF14490 Helix-hairpin-helix containing domain 154 244 4.4E-31 T 12-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain BAMF_2558 9c32bf444c7c2c00c9d8ee11a7a94895 792 SUPERFAMILY SSF52540 336 729 1.51E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2558 9c32bf444c7c2c00c9d8ee11a7a94895 792 Gene3D G3DSA:1.10.10.2220 195 288 9.4E-15 T 12-10-2018 BAMF_2558 9c32bf444c7c2c00c9d8ee11a7a94895 792 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 12 750 9.4E-257 T 12-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 BAMF_1647 0f54f6e2d62b3604c74dda82a4466eac 363 PIRSF PIRSF006004 9 363 8.7E-142 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 BAMF_1647 0f54f6e2d62b3604c74dda82a4466eac 363 SUPERFAMILY SSF102114 102 315 2.09E-13 T 12-10-2018 BAMF_1647 0f54f6e2d62b3604c74dda82a4466eac 363 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 14 363 1.6E-174 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 BAMF_1647 0f54f6e2d62b3604c74dda82a4466eac 363 Gene3D G3DSA:1.10.150.530 18 77 4.7E-23 T 12-10-2018 BAMF_1647 0f54f6e2d62b3604c74dda82a4466eac 363 Pfam PF13394 4Fe-4S single cluster domain 125 226 2.9E-6 T 12-10-2018 BAMF_1647 0f54f6e2d62b3604c74dda82a4466eac 363 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 17 359 73.796 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 BAMF_1647 0f54f6e2d62b3604c74dda82a4466eac 363 Gene3D G3DSA:3.20.20.70 80 344 7.5E-100 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_1647 0f54f6e2d62b3604c74dda82a4466eac 363 Pfam PF04055 Radical SAM superfamily 120 293 3.9E-17 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BAMF_0825 33e5af7f217f5ed01b56b5678283a275 382 Gene3D G3DSA:1.10.443.10 181 378 1.7E-46 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BAMF_0825 33e5af7f217f5ed01b56b5678283a275 382 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 76 134 1.3E-10 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BAMF_0825 33e5af7f217f5ed01b56b5678283a275 382 Gene3D G3DSA:1.10.150.130 71 180 4.1E-21 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal BAMF_0825 33e5af7f217f5ed01b56b5678283a275 382 Pfam PF14657 Arm DNA-binding domain 23 61 1.0E-9 T 12-10-2018 IPR028259 AP2-like integrase, N-terminal domain BAMF_0825 33e5af7f217f5ed01b56b5678283a275 382 SUPERFAMILY SSF56349 75 371 1.74E-59 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BAMF_0825 33e5af7f217f5ed01b56b5678283a275 382 Pfam PF00589 Phage integrase family 184 366 5.7E-25 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BAMF_3442 c2e8482f5b27bc9227f0c7483530913f 177 Pfam PF08239 Bacterial SH3 domain 56 107 2.8E-7 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_3442 c2e8482f5b27bc9227f0c7483530913f 177 Gene3D G3DSA:2.30.30.40 48 112 5.4E-12 T 12-10-2018 BAMF_3442 c2e8482f5b27bc9227f0c7483530913f 177 SMART SM00287 47 111 1.1E-12 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_3442 c2e8482f5b27bc9227f0c7483530913f 177 SMART SM00287 118 176 0.51 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BAMF_3595 87b6828635ca163b68feb2624387008a 287 Hamap MF_02119 Lipoyl-[GcvH]:protein N-lipoyltransferase [lipL]. 7 281 50.132 T 12-10-2018 IPR024897 Octanoyltransferase LipL GO:0009107|GO:0009249|GO:0016415 MetaCyc: PWY-6987 BAMF_3595 87b6828635ca163b68feb2624387008a 287 Gene3D G3DSA:3.30.930.10 5 286 8.5E-82 T 12-10-2018 BAMF_3595 87b6828635ca163b68feb2624387008a 287 Pfam PF03099 Biotin/lipoate A/B protein ligase family 74 184 3.6E-18 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BAMF_3595 87b6828635ca163b68feb2624387008a 287 SUPERFAMILY SSF55681 6 266 8.29E-70 T 12-10-2018 BAMF_3084 2d4cc1516581fe1b614b55a4fa3229d9 104 Gene3D G3DSA:1.10.3230.30 3 102 1.5E-5 T 12-10-2018 BAMF_3084 2d4cc1516581fe1b614b55a4fa3229d9 104 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 9 100 2.4E-23 T 12-10-2018 IPR006450 Phage protein of unkonwn function BAMF_3084 2d4cc1516581fe1b614b55a4fa3229d9 104 Pfam PF05135 Phage gp6-like head-tail connector protein 8 97 1.3E-17 T 12-10-2018 IPR021146 Phage gp6-like head-tail connector protein BAMF_2704 2dfad01f42a44c0f66fb3bb9a2b1fb9f 126 Gene3D G3DSA:3.30.160.750 63 125 7.2E-18 T 12-10-2018 BAMF_2704 2dfad01f42a44c0f66fb3bb9a2b1fb9f 126 Pfam PF02675 S-adenosylmethionine decarboxylase 7 112 1.3E-36 T 12-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BAMF_2704 2dfad01f42a44c0f66fb3bb9a2b1fb9f 126 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 112 6.9E-41 T 12-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BAMF_2704 2dfad01f42a44c0f66fb3bb9a2b1fb9f 126 Gene3D G3DSA:3.30.360.110 1 62 5.6E-26 T 12-10-2018 BAMF_2704 2dfad01f42a44c0f66fb3bb9a2b1fb9f 126 SUPERFAMILY SSF56276 2 113 1.47E-40 T 12-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 BAMF_2704 2dfad01f42a44c0f66fb3bb9a2b1fb9f 126 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 116 31.684 T 12-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BAMF_0544 025c2cd645d75454b35ce2b3796634ae 126 Pfam PF01381 Helix-turn-helix 7 61 2.9E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_0544 025c2cd645d75454b35ce2b3796634ae 126 SUPERFAMILY SSF47413 1 67 2.6E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_0544 025c2cd645d75454b35ce2b3796634ae 126 SMART SM00530 6 61 2.5E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_0544 025c2cd645d75454b35ce2b3796634ae 126 Gene3D G3DSA:1.10.260.40 1 64 5.3E-23 T 12-10-2018 BAMF_3239 59011f35703851ad3b4fba9c2e59f4b6 236 ProDom PD113106 YVBI TRANSMEMBRANE MEMBRANE YEBC YBEC 1 232 3.0E-57 T 12-10-2018 BAMF_3250 c7cbd40e3958b4eb8acb9181ae765c90 444 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 337 432 7.2E-20 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BAMF_3250 c7cbd40e3958b4eb8acb9181ae765c90 444 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 225 315 1.5E-27 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BAMF_3250 c7cbd40e3958b4eb8acb9181ae765c90 444 SUPERFAMILY SSF51735 27 218 1.21E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3250 c7cbd40e3958b4eb8acb9181ae765c90 444 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 27 429 1.3E-120 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BAMF_3250 c7cbd40e3958b4eb8acb9181ae765c90 444 SUPERFAMILY SSF48179 224 317 1.87E-28 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_3250 c7cbd40e3958b4eb8acb9181ae765c90 444 PIRSF PIRSF500136 16 443 2.1E-136 T 12-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 BAMF_3250 c7cbd40e3958b4eb8acb9181ae765c90 444 Gene3D G3DSA:3.40.50.720 224 443 1.6E-54 T 12-10-2018 BAMF_3250 c7cbd40e3958b4eb8acb9181ae765c90 444 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 27 204 9.1E-40 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BAMF_3250 c7cbd40e3958b4eb8acb9181ae765c90 444 SUPERFAMILY SSF52413 332 433 1.96E-22 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 BAMF_3250 c7cbd40e3958b4eb8acb9181ae765c90 444 PIRSF PIRSF000124 25 444 9.1E-58 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BAMF_3250 c7cbd40e3958b4eb8acb9181ae765c90 444 SMART SM00984 337 433 2.0E-24 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BAMF_3250 c7cbd40e3958b4eb8acb9181ae765c90 444 Gene3D G3DSA:3.40.50.720 11 221 5.1E-59 T 12-10-2018 BAMF_2472 04e81486bc79bcf507937da2e0336d80 240 TIGRFAM TIGR02846 spore_sigmaK: RNA polymerase sigma-K factor 5 228 2.5E-115 T 12-10-2018 IPR014209 RNA polymerase sigma-K type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_2472 04e81486bc79bcf507937da2e0336d80 240 Pfam PF04545 Sigma-70, region 4 173 223 1.5E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BAMF_2472 04e81486bc79bcf507937da2e0336d80 240 Gene3D G3DSA:1.10.10.10 154 234 2.7E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2472 04e81486bc79bcf507937da2e0336d80 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 197 223 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2472 04e81486bc79bcf507937da2e0336d80 240 SUPERFAMILY SSF88659 139 225 1.55E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_2472 04e81486bc79bcf507937da2e0336d80 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2472 04e81486bc79bcf507937da2e0336d80 240 Pfam PF04542 Sigma-70 region 2 54 123 3.1E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_2472 04e81486bc79bcf507937da2e0336d80 240 Gene3D G3DSA:1.20.120.1810 19 126 1.3E-23 T 12-10-2018 BAMF_2472 04e81486bc79bcf507937da2e0336d80 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 223 6.1E-31 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_2472 04e81486bc79bcf507937da2e0336d80 240 SUPERFAMILY SSF88946 9 120 4.45E-33 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_2472 04e81486bc79bcf507937da2e0336d80 240 PIRSF PIRSF000770 1 240 5.0E-94 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2472 04e81486bc79bcf507937da2e0336d80 240 PRINTS PR00046 Major sigma-70 factor signature 212 223 7.1E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2472 04e81486bc79bcf507937da2e0336d80 240 PRINTS PR00046 Major sigma-70 factor signature 176 188 7.1E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2472 04e81486bc79bcf507937da2e0336d80 240 PRINTS PR00046 Major sigma-70 factor signature 78 91 7.1E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_2472 04e81486bc79bcf507937da2e0336d80 240 PRINTS PR00046 Major sigma-70 factor signature 197 212 7.1E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1275 b7d645efe100e7be6c8fe2e2da78a3c5 424 Pfam PF07693 KAP family P-loop domain 58 296 1.4E-4 T 12-10-2018 IPR011646 KAP family P-loop domain BAMF_1275 b7d645efe100e7be6c8fe2e2da78a3c5 424 Gene3D G3DSA:3.40.50.300 43 152 3.2E-6 T 12-10-2018 BAMF_1275 b7d645efe100e7be6c8fe2e2da78a3c5 424 SUPERFAMILY SSF52540 52 342 1.07E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0170 7ad5f13cc4034b4b234939fbf4068201 636 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 299 316 - T 12-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 BAMF_0170 7ad5f13cc4034b4b234939fbf4068201 636 SUPERFAMILY SSF52279 430 629 7.98E-9 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BAMF_0170 7ad5f13cc4034b4b234939fbf4068201 636 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 38 387 1.0E-119 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BAMF_0170 7ad5f13cc4034b4b234939fbf4068201 636 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 430 616 2.6E-15 T 12-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 BAMF_0170 7ad5f13cc4034b4b234939fbf4068201 636 Gene3D G3DSA:3.40.50.1700 414 634 4.3E-57 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BAMF_0170 7ad5f13cc4034b4b234939fbf4068201 636 Gene3D G3DSA:3.20.20.300 24 413 8.2E-165 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 BAMF_0170 7ad5f13cc4034b4b234939fbf4068201 636 SUPERFAMILY SSF51445 22 428 2.0E-101 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_3488 3ee45df20815b8541368b74e9041bfd0 484 Gene3D G3DSA:1.10.4160.10 1 472 3.3E-136 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily BAMF_3488 3ee45df20815b8541368b74e9041bfd0 484 TIGRFAM TIGR00800 ncs1: NCS1 nucleoside transporter family 11 446 7.2E-149 T 12-10-2018 IPR012681 Nucleobase cation symporter-1, NCS1 GO:0016020|GO:0022857|GO:0055085 BAMF_3488 3ee45df20815b8541368b74e9041bfd0 484 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 16 452 6.7E-146 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 BAMF_2828 5a87f7db129a0c2f0fb58a594eb55b57 292 SMART SM00382 26 203 8.7E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2828 5a87f7db129a0c2f0fb58a594eb55b57 292 Pfam PF00005 ABC transporter 17 154 3.2E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_2828 5a87f7db129a0c2f0fb58a594eb55b57 292 SUPERFAMILY SSF52540 1 221 7.14E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2828 5a87f7db129a0c2f0fb58a594eb55b57 292 Gene3D G3DSA:3.40.50.300 1 236 3.8E-48 T 12-10-2018 BAMF_2580 85480aa51ed8120f15fe073adf660ad8 86 PRINTS PR01853 Bacterial YajC preprotein translocase signature 42 60 3.7E-15 T 12-10-2018 IPR003849 Preprotein translocase YajC BAMF_2580 85480aa51ed8120f15fe073adf660ad8 86 PRINTS PR01853 Bacterial YajC preprotein translocase signature 4 24 3.7E-15 T 12-10-2018 IPR003849 Preprotein translocase YajC BAMF_2580 85480aa51ed8120f15fe073adf660ad8 86 Pfam PF02699 Preprotein translocase subunit 6 81 7.2E-32 T 12-10-2018 IPR003849 Preprotein translocase YajC BAMF_2580 85480aa51ed8120f15fe073adf660ad8 86 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 3 83 2.8E-34 T 12-10-2018 IPR003849 Preprotein translocase YajC BAMF_2580 85480aa51ed8120f15fe073adf660ad8 86 SMART SM01323 2 84 2.7E-43 T 12-10-2018 IPR003849 Preprotein translocase YajC BAMF_0106 bfda92640d453506e20a8dbe99c9d59d 201 SUPERFAMILY SSF53335 7 200 1.11E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_0106 bfda92640d453506e20a8dbe99c9d59d 201 Pfam PF05175 Methyltransferase small domain 28 197 8.5E-49 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BAMF_0106 bfda92640d453506e20a8dbe99c9d59d 201 Gene3D G3DSA:3.40.50.150 6 201 2.1E-46 T 12-10-2018 BAMF_3749 652560bc4ead4a81ccff1e5a6f0eaa19 611 Pfam PF00367 phosphotransferase system, EIIB 8 41 2.3E-15 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BAMF_3749 652560bc4ead4a81ccff1e5a6f0eaa19 611 Gene3D G3DSA:3.30.1360.60 1 76 1.6E-27 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BAMF_3749 652560bc4ead4a81ccff1e5a6f0eaa19 611 SUPERFAMILY SSF55604 6 79 4.18E-22 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BAMF_3749 652560bc4ead4a81ccff1e5a6f0eaa19 611 SUPERFAMILY SSF51261 461 608 6.28E-54 T 12-10-2018 IPR011055 Duplicated hybrid motif BAMF_3749 652560bc4ead4a81ccff1e5a6f0eaa19 611 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 465 590 3.5E-51 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BAMF_3749 652560bc4ead4a81ccff1e5a6f0eaa19 611 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 528 540 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BAMF_3749 652560bc4ead4a81ccff1e5a6f0eaa19 611 Pfam PF02378 Phosphotransferase system, EIIC 107 386 3.8E-35 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BAMF_3749 652560bc4ead4a81ccff1e5a6f0eaa19 611 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 610 9.9E-226 T 12-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 BAMF_3749 652560bc4ead4a81ccff1e5a6f0eaa19 611 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BAMF_3749 652560bc4ead4a81ccff1e5a6f0eaa19 611 Gene3D G3DSA:2.70.70.10 459 610 3.7E-57 T 12-10-2018 IPR011055 Duplicated hybrid motif BAMF_3749 652560bc4ead4a81ccff1e5a6f0eaa19 611 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 466 586 1.5E-45 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BAMF_2268 d23fe2150bfdef076dc32f85bc8567ed 408 Pfam PF00817 impB/mucB/samB family 7 155 2.5E-44 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BAMF_2268 d23fe2150bfdef076dc32f85bc8567ed 408 Gene3D G3DSA:3.30.70.270 4 161 5.4E-47 T 12-10-2018 BAMF_2268 d23fe2150bfdef076dc32f85bc8567ed 408 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 349 1.0E-19 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BAMF_2268 d23fe2150bfdef076dc32f85bc8567ed 408 Pfam PF11798 IMS family HHH motif 172 201 7.1E-6 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BAMF_2268 d23fe2150bfdef076dc32f85bc8567ed 408 Gene3D G3DSA:3.30.1490.100 246 352 2.4E-18 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BAMF_2268 d23fe2150bfdef076dc32f85bc8567ed 408 Gene3D G3DSA:2.30.40.20 21 74 5.4E-47 T 12-10-2018 BAMF_2268 d23fe2150bfdef076dc32f85bc8567ed 408 SUPERFAMILY SSF100879 246 346 2.35E-20 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BAMF_2268 d23fe2150bfdef076dc32f85bc8567ed 408 Hamap MF_01113 DNA polymerase IV [dinB]. 1 358 32.78 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BAMF_2268 d23fe2150bfdef076dc32f85bc8567ed 408 SUPERFAMILY SSF56672 4 238 7.74E-74 T 12-10-2018 BAMF_2268 d23fe2150bfdef076dc32f85bc8567ed 408 Gene3D G3DSA:1.10.150.20 171 232 4.1E-12 T 12-10-2018 BAMF_0679 c78d5a4749860ae7c7c0c234b1ae4b30 289 PIRSF PIRSF000812 1 284 1.4E-117 T 12-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase BAMF_0679 c78d5a4749860ae7c7c0c234b1ae4b30 289 Gene3D G3DSA:3.30.460.10 9 149 2.1E-58 T 12-10-2018 BAMF_0679 c78d5a4749860ae7c7c0c234b1ae4b30 289 SUPERFAMILY SSF81301 2 132 1.57E-49 T 12-10-2018 BAMF_0679 c78d5a4749860ae7c7c0c234b1ae4b30 289 SUPERFAMILY SSF81631 138 280 7.45E-52 T 12-10-2018 BAMF_0679 c78d5a4749860ae7c7c0c234b1ae4b30 289 Gene3D G3DSA:1.20.120.330 150 287 1.3E-45 T 12-10-2018 BAMF_0679 c78d5a4749860ae7c7c0c234b1ae4b30 289 Pfam PF04439 Streptomycin adenylyltransferase 2 276 3.5E-115 T 12-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase BAMF_3000 7d236572786e9f96f91493b01e6bb132 442 Pfam PF03553 Na+/H+ antiporter family 150 436 6.8E-66 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BAMF_3000 7d236572786e9f96f91493b01e6bb132 442 Pfam PF13726 Na+-H+ antiporter family 2 88 1.2E-32 T 12-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal BAMF_1012 d2f778481b0e09c8eda333422b3831cf 163 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 9 159 1.2E-49 T 12-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 BAMF_1012 d2f778481b0e09c8eda333422b3831cf 163 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 29 158 5.2E-28 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like BAMF_0635 7112e2a418d691c1957cc84b4fd4b8b6 65 Pfam PF14044 NETI protein 8 63 1.2E-27 T 12-10-2018 IPR025930 NETI protein BAMF_3089 656b3667727c4c27e3f531fc2f82592d 577 Pfam PF03354 Phage Terminase 79 556 1.5E-103 T 12-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type BAMF_3089 656b3667727c4c27e3f531fc2f82592d 577 Gene3D G3DSA:3.40.50.300 22 258 5.7E-21 T 12-10-2018 BAMF_3187 ba439c6412af088a34ac485e1311cbc0 276 PIRSF PIRSF000097 2 120 1.8E-40 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_3187 ba439c6412af088a34ac485e1311cbc0 276 PIRSF PIRSF000097 115 272 7.9E-54 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_3187 ba439c6412af088a34ac485e1311cbc0 276 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 44 61 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BAMF_3187 ba439c6412af088a34ac485e1311cbc0 276 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 230 245 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BAMF_3187 ba439c6412af088a34ac485e1311cbc0 276 SUPERFAMILY SSF51430 7 268 3.27E-96 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_3187 ba439c6412af088a34ac485e1311cbc0 276 Gene3D G3DSA:3.20.20.100 1 276 3.2E-130 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_3187 ba439c6412af088a34ac485e1311cbc0 276 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 126 143 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BAMF_3187 ba439c6412af088a34ac485e1311cbc0 276 PRINTS PR00069 Aldo-keto reductase signature 126 143 1.6E-53 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_3187 ba439c6412af088a34ac485e1311cbc0 276 PRINTS PR00069 Aldo-keto reductase signature 96 114 1.6E-53 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_3187 ba439c6412af088a34ac485e1311cbc0 276 PRINTS PR00069 Aldo-keto reductase signature 197 221 1.6E-53 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_3187 ba439c6412af088a34ac485e1311cbc0 276 PRINTS PR00069 Aldo-keto reductase signature 40 64 1.6E-53 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_3187 ba439c6412af088a34ac485e1311cbc0 276 PRINTS PR00069 Aldo-keto reductase signature 160 189 1.6E-53 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_3187 ba439c6412af088a34ac485e1311cbc0 276 Pfam PF00248 Aldo/keto reductase family 32 262 4.0E-54 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain BAMF_1032 80de8f1e221e5df59515d503eb626175 107 Pfam PF13028 Protein of unknown function (DUF3889) 19 106 4.7E-28 T 12-10-2018 IPR024987 Protein of unknown function DUF3889 BAMF_1032 80de8f1e221e5df59515d503eb626175 107 Gene3D G3DSA:3.10.450.390 27 106 4.9E-10 T 12-10-2018 BAMF_3069 8ee26e201217f3da77967d64c612a1ef 337 Gene3D G3DSA:2.30.30.40 174 240 4.1E-10 T 12-10-2018 BAMF_3069 8ee26e201217f3da77967d64c612a1ef 337 SUPERFAMILY SSF55846 1 154 5.89E-49 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_3069 8ee26e201217f3da77967d64c612a1ef 337 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 23 141 1.1E-24 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_3069 8ee26e201217f3da77967d64c612a1ef 337 SMART SM00644 11 154 7.6E-44 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_3069 8ee26e201217f3da77967d64c612a1ef 337 Gene3D G3DSA:3.40.80.10 1 155 9.4E-56 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BAMF_2336 28398ad5cf08570df6131f6d517ad02d 130 Gene3D G3DSA:1.10.940.10 1 125 2.3E-46 T 12-10-2018 IPR035926 NusB-like superfamily BAMF_2336 28398ad5cf08570df6131f6d517ad02d 130 SUPERFAMILY SSF48013 2 125 1.96E-43 T 12-10-2018 IPR035926 NusB-like superfamily BAMF_2336 28398ad5cf08570df6131f6d517ad02d 130 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 2 127 1.3E-45 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 BAMF_2336 28398ad5cf08570df6131f6d517ad02d 130 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 1 129 25.352 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 BAMF_2336 28398ad5cf08570df6131f6d517ad02d 130 Pfam PF01029 NusB family 4 124 2.5E-42 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BAMF_0059 ebebd81c7ebd1af96577f24c724df6d6 86 Pfam PF01479 S4 domain 1 47 5.4E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0059 ebebd81c7ebd1af96577f24c724df6d6 86 SUPERFAMILY SSF55174 1 76 6.8E-21 T 12-10-2018 BAMF_0059 ebebd81c7ebd1af96577f24c724df6d6 86 Gene3D G3DSA:3.10.290.10 1 86 1.2E-25 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BAMF_0059 ebebd81c7ebd1af96577f24c724df6d6 86 SMART SM00363 1 64 4.7E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0059 ebebd81c7ebd1af96577f24c724df6d6 86 PIRSF PIRSF038881 1 86 4.8E-35 T 12-10-2018 IPR025490 RNA-binding protein, HP1423 type BAMF_2400 362858d43d8e1d68719ce08381590564 429 Pfam PF07690 Major Facilitator Superfamily 62 335 2.3E-16 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_2400 362858d43d8e1d68719ce08381590564 429 Gene3D G3DSA:1.20.1250.20 13 203 1.4E-14 T 12-10-2018 BAMF_2400 362858d43d8e1d68719ce08381590564 429 Gene3D G3DSA:1.20.1250.20 217 401 2.6E-5 T 12-10-2018 BAMF_2400 362858d43d8e1d68719ce08381590564 429 SUPERFAMILY SSF103473 14 397 1.66E-31 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_2159 aeaf6982fd30aceef127964ce6b2b818 179 Hamap MF_00760 UPF0302 protein . 2 178 33.021 T 12-10-2018 IPR011188 Uncharacterised protein family UPF0302 BAMF_2159 aeaf6982fd30aceef127964ce6b2b818 179 Pfam PF08858 IDEAL domain 139 175 3.2E-14 T 12-10-2018 IPR014957 IDEAL domain BAMF_2159 aeaf6982fd30aceef127964ce6b2b818 179 SMART SM00914 139 175 1.6E-14 T 12-10-2018 IPR014957 IDEAL domain BAMF_2159 aeaf6982fd30aceef127964ce6b2b818 179 Gene3D G3DSA:4.10.810.10 124 179 6.5E-20 T 12-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 BAMF_2159 aeaf6982fd30aceef127964ce6b2b818 179 PIRSF PIRSF007165 1 179 1.2E-82 T 12-10-2018 IPR011188 Uncharacterised protein family UPF0302 BAMF_2159 aeaf6982fd30aceef127964ce6b2b818 179 Pfam PF08864 UPF0302 domain 9 112 6.9E-47 T 12-10-2018 IPR014963 Uncharacterised domain UPF0302, N-terminal BAMF_2159 aeaf6982fd30aceef127964ce6b2b818 179 Gene3D G3DSA:1.20.1440.290 1 123 1.9E-55 T 12-10-2018 IPR038091 UPF0302, N-terminal domain superfamily BAMF_2683 e691f8b16ba77ad0ba165060912678f3 229 SUPERFAMILY SSF53639 1 220 1.39E-66 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BAMF_2683 e691f8b16ba77ad0ba165060912678f3 229 SMART SM01007 7 195 8.6E-63 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal BAMF_2683 e691f8b16ba77ad0ba165060912678f3 229 Gene3D G3DSA:3.40.225.10 1 228 4.8E-60 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BAMF_2683 e691f8b16ba77ad0ba165060912678f3 229 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 194 1.4E-46 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal BAMF_2683 e691f8b16ba77ad0ba165060912678f3 229 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 228 5.6E-127 T 12-10-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 BAMF_3260 241450c2e312c6911d500bd0b25b35e7 335 Gene3D G3DSA:3.20.20.30 6 334 2.1E-100 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_3260 241450c2e312c6911d500bd0b25b35e7 335 Pfam PF00296 Luciferase-like monooxygenase 24 303 8.6E-40 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BAMF_3260 241450c2e312c6911d500bd0b25b35e7 335 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 11 331 9.6E-138 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 BAMF_3260 241450c2e312c6911d500bd0b25b35e7 335 SUPERFAMILY SSF51679 11 331 9.66E-88 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_2534 7a1df15a736fc64fbef935f4ce9cd880 307 Gene3D G3DSA:3.40.50.1100 45 146 2.8E-113 T 12-10-2018 BAMF_2534 7a1df15a736fc64fbef935f4ce9cd880 307 SUPERFAMILY SSF53686 3 302 1.57E-91 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BAMF_2534 7a1df15a736fc64fbef935f4ce9cd880 307 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BAMF_2534 7a1df15a736fc64fbef935f4ce9cd880 307 Gene3D G3DSA:3.40.50.1100 9 299 2.8E-113 T 12-10-2018 BAMF_2534 7a1df15a736fc64fbef935f4ce9cd880 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 292 4.5E-66 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BAMF_1833 8e1d9cddfa7b96a9f578654f1f6e45ca 340 SUPERFAMILY SSF50129 1 165 1.29E-42 T 12-10-2018 IPR011032 GroES-like superfamily BAMF_1833 8e1d9cddfa7b96a9f578654f1f6e45ca 340 SMART SM00829 8 334 5.5E-6 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BAMF_1833 8e1d9cddfa7b96a9f578654f1f6e45ca 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 128 1.3E-24 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BAMF_1833 8e1d9cddfa7b96a9f578654f1f6e45ca 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BAMF_1833 8e1d9cddfa7b96a9f578654f1f6e45ca 340 SUPERFAMILY SSF51735 131 300 9.67E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1833 8e1d9cddfa7b96a9f578654f1f6e45ca 340 Pfam PF00107 Zinc-binding dehydrogenase 168 296 2.3E-29 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BAMF_1833 8e1d9cddfa7b96a9f578654f1f6e45ca 340 Gene3D G3DSA:3.90.180.10 20 322 8.4E-93 T 12-10-2018 BAMF_1833 8e1d9cddfa7b96a9f578654f1f6e45ca 340 Gene3D G3DSA:3.40.50.720 146 280 8.4E-93 T 12-10-2018 BAMF_1725 743990b5e2d513897fd71db2aaf91afc 260 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 204 221 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 BAMF_1725 743990b5e2d513897fd71db2aaf91afc 260 SUPERFAMILY SSF64005 29 253 4.05E-89 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 BAMF_1725 743990b5e2d513897fd71db2aaf91afc 260 Pfam PF01255 Putative undecaprenyl diphosphate synthase 38 258 6.0E-85 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BAMF_1725 743990b5e2d513897fd71db2aaf91afc 260 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 31 258 5.1E-90 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BAMF_1725 743990b5e2d513897fd71db2aaf91afc 260 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 31 259 41.043 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BAMF_1725 743990b5e2d513897fd71db2aaf91afc 260 Gene3D G3DSA:3.40.1180.10 13 260 1.3E-100 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 BAMF_1232 d69e43bccdc96038c72782c63c81ed95 190 Pfam PF01928 CYTH domain 4 182 2.2E-32 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 BAMF_1232 d69e43bccdc96038c72782c63c81ed95 190 SMART SM01118 4 188 8.6E-26 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 BAMF_1232 d69e43bccdc96038c72782c63c81ed95 190 SUPERFAMILY SSF55154 5 185 4.25E-31 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 BAMF_1232 d69e43bccdc96038c72782c63c81ed95 190 Gene3D G3DSA:2.40.320.10 1 188 3.1E-53 T 12-10-2018 BAMF_1232 d69e43bccdc96038c72782c63c81ed95 190 PIRSF PIRSF012526 1 189 3.5E-70 T 12-10-2018 IPR009195 Uncharacterised protein family YjbK BAMF_1232 d69e43bccdc96038c72782c63c81ed95 190 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 5 85 0.002 T 12-10-2018 BAMF_2242 43fe55231b1d33e3c1517571be5d49d5 117 Gene3D G3DSA:3.30.750.24 2 117 1.5E-34 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_2242 43fe55231b1d33e3c1517571be5d49d5 117 TIGRFAM TIGR02886 spore_II_AA: anti-sigma F factor antagonist 5 110 6.0E-47 T 12-10-2018 IPR014237 Anti-sigma F factor antagonist GO:0006355|GO:0030435|GO:0045152 BAMF_2242 43fe55231b1d33e3c1517571be5d49d5 117 Pfam PF01740 STAS domain 6 109 3.3E-25 T 12-10-2018 IPR002645 STAS domain BAMF_2242 43fe55231b1d33e3c1517571be5d49d5 117 SUPERFAMILY SSF52091 4 113 4.12E-31 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_2242 43fe55231b1d33e3c1517571be5d49d5 117 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 106 1.9E-39 T 12-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 BAMF_0281 41293b07e6c5088ccd9838d311772020 87 Pfam PF01810 LysE type translocator 12 86 5.7E-21 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BAMF_0331 acebaab259fe24bf534867c0ade13528 408 Gene3D G3DSA:3.30.300.210 246 398 9.6E-35 T 12-10-2018 IPR038501 Spore germination GerAC superfamily BAMF_0331 acebaab259fe24bf534867c0ade13528 408 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 5 397 1.1E-94 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 BAMF_0331 acebaab259fe24bf534867c0ade13528 408 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 229 395 2.7E-34 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 BAMF_0449 664d1a1cb3b02f69d0c2e50bde8563d7 160 SUPERFAMILY SSF55874 31 137 2.1E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0449 664d1a1cb3b02f69d0c2e50bde8563d7 160 Pfam PF13581 Histidine kinase-like ATPase domain 12 141 3.2E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0449 664d1a1cb3b02f69d0c2e50bde8563d7 160 Hamap MF_00638 Serine-protein kinase RsbW [rsbW]. 2 156 38.898 T 12-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 BAMF_0449 664d1a1cb3b02f69d0c2e50bde8563d7 160 Gene3D G3DSA:3.30.565.10 5 152 2.4E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0449 664d1a1cb3b02f69d0c2e50bde8563d7 160 TIGRFAM TIGR01924 rsbW_low_gc: anti-sigma B factor 1 159 2.3E-82 T 12-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 BAMF_0830 2792171c2f67467fdd8c34f9880572f1 93 ProDom PD061343 YQAH DNA SEQUENCE 1 86 4.0E-16 T 12-10-2018 IPR020278 Uncharacterized protein YqaH BAMF_0830 2792171c2f67467fdd8c34f9880572f1 93 Pfam PF17448 Uncharacterized protein YqaH 1 87 1.8E-24 T 12-10-2018 IPR020278 Uncharacterized protein YqaH BAMF_1521 314bd72e431e0b7158d29d095f7f5b41 335 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 4 331 1.0E-135 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_1521 314bd72e431e0b7158d29d095f7f5b41 335 Pfam PF06723 MreB/Mbl protein 5 331 2.3E-143 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_1521 314bd72e431e0b7158d29d095f7f5b41 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 295 321 1.2E-53 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_1521 314bd72e431e0b7158d29d095f7f5b41 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 42 60 1.2E-53 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_1521 314bd72e431e0b7158d29d095f7f5b41 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 182 202 1.2E-53 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_1521 314bd72e431e0b7158d29d095f7f5b41 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 62 85 1.2E-53 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_1521 314bd72e431e0b7158d29d095f7f5b41 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 127 146 1.2E-53 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BAMF_1521 314bd72e431e0b7158d29d095f7f5b41 335 Gene3D G3DSA:3.90.640.10 181 254 5.3E-124 T 12-10-2018 BAMF_1521 314bd72e431e0b7158d29d095f7f5b41 335 SUPERFAMILY SSF53067 144 329 1.62E-48 T 12-10-2018 BAMF_1521 314bd72e431e0b7158d29d095f7f5b41 335 Gene3D G3DSA:3.30.420.40 7 322 5.3E-124 T 12-10-2018 BAMF_1521 314bd72e431e0b7158d29d095f7f5b41 335 SUPERFAMILY SSF53067 5 141 1.21E-37 T 12-10-2018 BAMF_1521 314bd72e431e0b7158d29d095f7f5b41 335 Gene3D G3DSA:3.30.420.40 149 312 5.3E-124 T 12-10-2018 BAMF_0363 339d3c6ff5f71f4ae98392544c723d77 542 SUPERFAMILY SSF81296 23 120 2.87E-22 T 12-10-2018 IPR014756 Immunoglobulin E-set BAMF_0363 339d3c6ff5f71f4ae98392544c723d77 542 Pfam PF13115 YtkA-like 455 525 3.5E-6 T 12-10-2018 IPR032693 YtkA-like domain BAMF_0363 339d3c6ff5f71f4ae98392544c723d77 542 Pfam PF04234 CopC domain 24 120 1.9E-19 T 12-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 BAMF_0363 339d3c6ff5f71f4ae98392544c723d77 542 Gene3D G3DSA:2.60.40.1220 24 124 8.2E-25 T 12-10-2018 BAMF_0363 339d3c6ff5f71f4ae98392544c723d77 542 Pfam PF05425 Copper resistance protein D 328 420 7.2E-18 T 12-10-2018 IPR008457 Copper resistance protein D GO:0016021 BAMF_1907 3d8f8c63a9b36004d5cf3eccf3b8d2d4 466 Gene3D G3DSA:3.30.565.10 308 466 6.1E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1907 3d8f8c63a9b36004d5cf3eccf3b8d2d4 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 465 4.4E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1907 3d8f8c63a9b36004d5cf3eccf3b8d2d4 466 SMART SM00387 359 466 4.1E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1907 3d8f8c63a9b36004d5cf3eccf3b8d2d4 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 309 3.9E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_1907 3d8f8c63a9b36004d5cf3eccf3b8d2d4 466 SMART SM00388 245 313 3.4E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_1907 3d8f8c63a9b36004d5cf3eccf3b8d2d4 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 1.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1907 3d8f8c63a9b36004d5cf3eccf3b8d2d4 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 1.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1907 3d8f8c63a9b36004d5cf3eccf3b8d2d4 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 423 1.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1907 3d8f8c63a9b36004d5cf3eccf3b8d2d4 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 1.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1907 3d8f8c63a9b36004d5cf3eccf3b8d2d4 466 Gene3D G3DSA:1.10.287.130 185 307 3.9E-19 T 12-10-2018 BAMF_1907 3d8f8c63a9b36004d5cf3eccf3b8d2d4 466 SUPERFAMILY SSF47384 228 313 4.12E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_1907 3d8f8c63a9b36004d5cf3eccf3b8d2d4 466 SUPERFAMILY SSF55874 303 465 1.06E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3131 030a09c650f7d1f1a82daaf0ffb0e598 213 SUPERFAMILY SSF52980 1 213 1.13E-78 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BAMF_3131 030a09c650f7d1f1a82daaf0ffb0e598 213 PIRSF PIRSF009309 1 213 9.0E-127 T 12-10-2018 IPR004194 Restriction endonuclease, type II, BamHI BAMF_3131 030a09c650f7d1f1a82daaf0ffb0e598 213 Pfam PF02923 Restriction endonuclease BamHI 20 167 5.6E-37 T 12-10-2018 IPR004194 Restriction endonuclease, type II, BamHI BAMF_3131 030a09c650f7d1f1a82daaf0ffb0e598 213 Gene3D G3DSA:3.40.91.20 1 213 2.1E-86 T 12-10-2018 IPR011338 Restriction endonuclease, type II, BamHI/BglIII/BstY GO:0000287|GO:0003677|GO:0009036|GO:0009307 BAMF_3644 a3dc628215266960f8c2832e27e7d276 138 Gene3D G3DSA:3.10.450.50 3 113 2.8E-27 T 12-10-2018 BAMF_3644 a3dc628215266960f8c2832e27e7d276 138 SUPERFAMILY SSF54427 5 116 1.44E-12 T 12-10-2018 IPR032710 NTF2-like domain superfamily BAMF_1517 8933ec3647ffa70dfa144371a0d96188 539 Pfam PF12848 ABC transporter 224 309 5.5E-20 T 12-10-2018 IPR032781 ABC-transporter extension domain BAMF_1517 8933ec3647ffa70dfa144371a0d96188 539 SUPERFAMILY SSF52540 2 249 4.13E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1517 8933ec3647ffa70dfa144371a0d96188 539 Gene3D G3DSA:3.40.50.300 1 279 6.0E-57 T 12-10-2018 BAMF_1517 8933ec3647ffa70dfa144371a0d96188 539 Pfam PF00005 ABC transporter 18 184 9.1E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1517 8933ec3647ffa70dfa144371a0d96188 539 SUPERFAMILY SSF52540 295 529 3.66E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1517 8933ec3647ffa70dfa144371a0d96188 539 Pfam PF00005 ABC transporter 335 468 4.6E-14 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1517 8933ec3647ffa70dfa144371a0d96188 539 SMART SM00382 26 228 1.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1517 8933ec3647ffa70dfa144371a0d96188 539 SMART SM00382 344 525 0.98 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1517 8933ec3647ffa70dfa144371a0d96188 539 Gene3D G3DSA:3.40.50.300 283 538 4.8E-42 T 12-10-2018 BAMF_3318 5c1e1019ff15d163a27f20540464fc72 321 Gene3D G3DSA:3.40.50.720 5 312 7.8E-115 T 12-10-2018 BAMF_3318 5c1e1019ff15d163a27f20540464fc72 321 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 175 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BAMF_3318 5c1e1019ff15d163a27f20540464fc72 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 286 2.3E-66 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BAMF_3318 5c1e1019ff15d163a27f20540464fc72 321 SUPERFAMILY SSF52283 2 130 6.17E-31 T 12-10-2018 BAMF_3318 5c1e1019ff15d163a27f20540464fc72 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 316 4.3E-29 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BAMF_3318 5c1e1019ff15d163a27f20540464fc72 321 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BAMF_3318 5c1e1019ff15d163a27f20540464fc72 321 SUPERFAMILY SSF51735 99 287 1.53E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3318 5c1e1019ff15d163a27f20540464fc72 321 Gene3D G3DSA:3.40.50.720 96 287 7.8E-115 T 12-10-2018 BAMF_3731 e4f6ab20a71c263852d0879d5eec0847 353 Pfam PF03600 Citrate transporter 14 299 5.9E-41 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 BAMF_3731 e4f6ab20a71c263852d0879d5eec0847 353 TIGRFAM TIGR00784 citMHS: citrate transporter 8 353 1.1E-188 T 12-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 BAMF_0437 5b2b42ebf8cb67e152814bb62537b37c 488 Pfam PF03703 Bacterial PH domain 402 480 5.1E-9 T 12-10-2018 IPR005182 Domain of unknown function DUF304 BAMF_0437 5b2b42ebf8cb67e152814bb62537b37c 488 Pfam PF03703 Bacterial PH domain 256 330 1.9E-13 T 12-10-2018 IPR005182 Domain of unknown function DUF304 BAMF_0437 5b2b42ebf8cb67e152814bb62537b37c 488 Pfam PF03703 Bacterial PH domain 67 145 1.8E-17 T 12-10-2018 IPR005182 Domain of unknown function DUF304 BAMF_0437 5b2b42ebf8cb67e152814bb62537b37c 488 PIRSF PIRSF026631 1 488 2.1E-140 T 12-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 BAMF_2844 06969fd3b2d83e95ed63eec500d1016a 270 Gene3D G3DSA:1.10.3720.10 72 267 7.7E-23 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2844 06969fd3b2d83e95ed63eec500d1016a 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 264 2.1E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_2844 06969fd3b2d83e95ed63eec500d1016a 270 SUPERFAMILY SSF161098 72 253 6.02E-30 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 Gene3D G3DSA:1.10.1040.10 180 435 3.7E-112 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 3.3E-232 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 SUPERFAMILY SSF51735 4 176 5.99E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 12-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 167 1.4E-54 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 Gene3D G3DSA:1.20.5.320 436 469 2.7E-22 T 12-10-2018 BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 SMART SM01350 178 468 4.1E-232 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 SUPERFAMILY SSF48179 176 468 3.74E-133 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 8.4E-89 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 8.4E-89 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 8.4E-89 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 8.4E-89 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 8.4E-89 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 8.4E-89 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 467 7.5E-137 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 Gene3D G3DSA:3.40.50.720 1 179 2.0E-60 T 12-10-2018 BAMF_2286 da20c26e5b65032a4d4a6ba0563ba1ec 469 PIRSF PIRSF000109 1 469 3.0E-245 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BAMF_3580 7606b2633eb0fa78a0c5af38dfbeb43e 62 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 61 5.8E-29 T 12-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 BAMF_3580 7606b2633eb0fa78a0c5af38dfbeb43e 62 Pfam PF01361 Tautomerase enzyme 2 60 5.1E-22 T 12-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 BAMF_3580 7606b2633eb0fa78a0c5af38dfbeb43e 62 Gene3D G3DSA:3.30.429.10 1 60 3.7E-25 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily BAMF_3580 7606b2633eb0fa78a0c5af38dfbeb43e 62 SUPERFAMILY SSF55331 2 60 8.38E-18 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 SMART SM00086 149 191 9.9E-6 T 12-10-2018 IPR001610 PAC motif BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 425 1.3E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 SMART SM00388 214 277 7.8E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 SUPERFAMILY SSF47384 201 275 2.35E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 SMART SM00387 320 426 1.2E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 Gene3D G3DSA:1.10.287.130 198 277 2.2E-15 T 12-10-2018 BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 Pfam PF00989 PAS fold 80 188 3.1E-17 T 12-10-2018 IPR013767 PAS fold GO:0006355 BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 SUPERFAMILY SSF55874 267 424 2.49E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 Gene3D G3DSA:3.30.565.10 279 432 2.5E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 82 198 6.9E-17 T 12-10-2018 IPR000014 PAS domain BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 SUPERFAMILY SSF55785 83 194 1.94E-18 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 SMART SM00091 78 146 1.8E-6 T 12-10-2018 IPR000014 PAS domain BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 Gene3D G3DSA:3.30.450.20 76 194 1.5E-20 T 12-10-2018 BAMF_1523 c4f58e4586c8d7c6933e6c58654a3e34 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 216 275 2.1E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BAMF_3247 658c956f3eb0f7a2493edac77053998b 418 Gene3D G3DSA:3.90.1150.10 283 418 1.1E-10 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_3247 658c956f3eb0f7a2493edac77053998b 418 PIRSF PIRSF000390 41 211 5.8E-32 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BAMF_3247 658c956f3eb0f7a2493edac77053998b 418 PIRSF PIRSF000390 273 415 1.0E-4 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BAMF_3247 658c956f3eb0f7a2493edac77053998b 418 Gene3D G3DSA:3.40.640.10 32 249 3.3E-39 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_3247 658c956f3eb0f7a2493edac77053998b 418 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 57 407 2.1E-40 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BAMF_3247 658c956f3eb0f7a2493edac77053998b 418 SUPERFAMILY SSF53383 55 412 4.79E-45 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_1309 432d31b426f6eed07d651ecd429f3f97 394 SUPERFAMILY SSF53756 5 387 2.08E-79 T 12-10-2018 BAMF_1309 432d31b426f6eed07d651ecd429f3f97 394 Gene3D G3DSA:3.40.50.2000 9 384 3.1E-132 T 12-10-2018 BAMF_1309 432d31b426f6eed07d651ecd429f3f97 394 Gene3D G3DSA:3.40.50.2000 209 372 3.1E-132 T 12-10-2018 BAMF_1309 432d31b426f6eed07d651ecd429f3f97 394 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 216 358 1.7E-13 T 12-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 BAMF_1309 432d31b426f6eed07d651ecd429f3f97 394 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 9 389 2.2E-134 T 12-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 BAMF_0087 22d2117c2160ab4d1fcf4cb0507e5506 360 Pfam PF10635 DisA bacterial checkpoint controller linker region 146 284 1.5E-49 T 12-10-2018 IPR018906 DNA integrity scanning, DisA, linker region BAMF_0087 22d2117c2160ab4d1fcf4cb0507e5506 360 Gene3D G3DSA:3.40.1700.10 10 146 1.6E-56 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily BAMF_0087 22d2117c2160ab4d1fcf4cb0507e5506 360 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 7 357 44.736 T 12-10-2018 IPR023763 DNA integrity scanning protein, DisA BAMF_0087 22d2117c2160ab4d1fcf4cb0507e5506 360 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 29 141 4.6E-28 T 12-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal BAMF_0087 22d2117c2160ab4d1fcf4cb0507e5506 360 Gene3D G3DSA:1.20.1260.110 147 292 1.0E-45 T 12-10-2018 IPR038331 DisA, linker domain superfamily BAMF_0087 22d2117c2160ab4d1fcf4cb0507e5506 360 SUPERFAMILY SSF143597 22 146 5.1E-30 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily BAMF_0087 22d2117c2160ab4d1fcf4cb0507e5506 360 SUPERFAMILY SSF47781 242 357 4.13E-11 T 12-10-2018 IPR010994 RuvA domain 2-like BAMF_0087 22d2117c2160ab4d1fcf4cb0507e5506 360 Gene3D G3DSA:1.10.150.20 293 356 3.1E-25 T 12-10-2018 BAMF_3205 73c2ac29ae4683051cff5e6c7a70acff 338 Pfam PF00296 Luciferase-like monooxygenase 14 296 4.5E-34 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BAMF_3205 73c2ac29ae4683051cff5e6c7a70acff 338 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 328 2.8E-98 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 BAMF_3205 73c2ac29ae4683051cff5e6c7a70acff 338 SUPERFAMILY SSF51679 2 332 1.71E-63 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_3205 73c2ac29ae4683051cff5e6c7a70acff 338 Gene3D G3DSA:3.20.20.30 1 333 1.1E-76 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_2670 b2bcdace75b5cbba66c09921a63248ec 345 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 10 342 48.756 T 12-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 BAMF_2670 b2bcdace75b5cbba66c09921a63248ec 345 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 22 89 7.8E-26 T 12-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BAMF_2670 b2bcdace75b5cbba66c09921a63248ec 345 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 41 343 1.1E-117 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BAMF_2670 b2bcdace75b5cbba66c09921a63248ec 345 SUPERFAMILY SSF55681 94 343 4.4E-83 T 12-10-2018 BAMF_2670 b2bcdace75b5cbba66c09921a63248ec 345 SUPERFAMILY SSF46589 16 100 1.41E-20 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BAMF_2670 b2bcdace75b5cbba66c09921a63248ec 345 Pfam PF01409 tRNA synthetases class II core domain (F) 94 342 1.7E-108 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 BAMF_2670 b2bcdace75b5cbba66c09921a63248ec 345 Gene3D G3DSA:3.30.930.10 10 345 5.0E-126 T 12-10-2018 BAMF_3063 c9b435d34df67073be83522b21a5bfc0 371 SUPERFAMILY SSF54373 224 312 1.26E-13 T 12-10-2018 BAMF_3063 c9b435d34df67073be83522b21a5bfc0 371 Gene3D G3DSA:3.50.50.60 5 351 3.0E-83 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_3063 c9b435d34df67073be83522b21a5bfc0 371 Gene3D G3DSA:3.30.9.10 88 311 3.0E-83 T 12-10-2018 BAMF_3063 c9b435d34df67073be83522b21a5bfc0 371 Pfam PF01266 FAD dependent oxidoreductase 4 351 9.7E-53 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BAMF_3063 c9b435d34df67073be83522b21a5bfc0 371 SUPERFAMILY SSF51905 2 366 1.29E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0153 de5376a9c48743fe1f45a73085eccb20 237 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 43 226 3.4E-48 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BAMF_0153 de5376a9c48743fe1f45a73085eccb20 237 Gene3D G3DSA:3.40.630.40 39 234 9.4E-56 T 12-10-2018 BAMF_0153 de5376a9c48743fe1f45a73085eccb20 237 TIGRFAM TIGR02883 spore_cwlD: N-acetylmuramoyl-L-alanine amidase CwlD 41 228 1.7E-84 T 12-10-2018 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD MetaCyc: PWY-7883 BAMF_0153 de5376a9c48743fe1f45a73085eccb20 237 SUPERFAMILY SSF53187 41 230 6.28E-52 T 12-10-2018 BAMF_0153 de5376a9c48743fe1f45a73085eccb20 237 SMART SM00646 115 226 2.1E-35 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BAMF_3760 18c7e123a2da543930986358416f8acd 421 SUPERFAMILY SSF51338 3 72 1.21E-21 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_3760 18c7e123a2da543930986358416f8acd 421 Gene3D G3DSA:2.30.40.10 10 410 1.4E-171 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_3760 18c7e123a2da543930986358416f8acd 421 Pfam PF01979 Amidohydrolase family 71 412 3.7E-20 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BAMF_3760 18c7e123a2da543930986358416f8acd 421 Hamap MF_00372 Imidazolonepropionase [hutI]. 6 412 42.844 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BAMF_3760 18c7e123a2da543930986358416f8acd 421 TIGRFAM TIGR01224 hutI: imidazolonepropionase 36 410 1.5E-161 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 BAMF_3760 18c7e123a2da543930986358416f8acd 421 Gene3D G3DSA:3.20.20.140 75 372 1.4E-171 T 12-10-2018 BAMF_3760 18c7e123a2da543930986358416f8acd 421 SUPERFAMILY SSF51338 355 415 6.75E-19 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_3760 18c7e123a2da543930986358416f8acd 421 SUPERFAMILY SSF51556 74 372 1.62E-84 T 12-10-2018 IPR032466 Metal-dependent hydrolase BAMF_3238 ec4bc78570910b0c5f6c11c262e75c09 231 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 22 222 2.0E-80 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BAMF_3238 ec4bc78570910b0c5f6c11c262e75c09 231 Pfam PF01914 MarC family integral membrane protein 23 226 6.4E-73 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BAMF_3303 c6dcb1a8fbace2c64ccea2a04f269d3a 475 Pfam PF01764 Lipase (class 3) 131 200 6.8E-5 T 12-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 BAMF_3303 c6dcb1a8fbace2c64ccea2a04f269d3a 475 Gene3D G3DSA:3.40.50.1820 13 296 2.2E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_3303 c6dcb1a8fbace2c64ccea2a04f269d3a 475 SUPERFAMILY SSF53474 13 270 8.87E-18 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_3724 01f572d375b10420f47d012b5420eee6 378 SUPERFAMILY SSF51726 22 378 7.85E-83 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BAMF_3724 01f572d375b10420f47d012b5420eee6 378 Gene3D G3DSA:3.20.20.210 14 378 2.6E-127 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BAMF_3724 01f572d375b10420f47d012b5420eee6 378 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 25 374 1.3E-17 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BAMF_1235 56f837e22ac293522638d6a8bd5a25a5 266 Hamap MF_00361 NAD kinase [nadK]. 1 263 23.03 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BAMF_1235 56f837e22ac293522638d6a8bd5a25a5 266 Pfam PF01513 ATP-NAD kinase 32 185 5.9E-24 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BAMF_1235 56f837e22ac293522638d6a8bd5a25a5 266 Gene3D G3DSA:3.40.50.10330 16 262 6.4E-98 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BAMF_1235 56f837e22ac293522638d6a8bd5a25a5 266 Gene3D G3DSA:2.60.200.30 102 240 6.4E-98 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BAMF_1235 56f837e22ac293522638d6a8bd5a25a5 266 SUPERFAMILY SSF111331 22 261 1.7E-61 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BAMF_0126 b6e6a668c0d8c2ec78da6a05a59e2aea 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.5E-54 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BAMF_0126 b6e6a668c0d8c2ec78da6a05a59e2aea 122 Gene3D G3DSA:2.40.150.20 1 122 5.7E-53 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 BAMF_0126 b6e6a668c0d8c2ec78da6a05a59e2aea 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.415 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BAMF_0126 b6e6a668c0d8c2ec78da6a05a59e2aea 122 SUPERFAMILY SSF50193 1 122 5.76E-50 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 BAMF_0126 b6e6a668c0d8c2ec78da6a05a59e2aea 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0126 b6e6a668c0d8c2ec78da6a05a59e2aea 122 SMART SM01374 1 122 2.2E-84 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BAMF_0126 b6e6a668c0d8c2ec78da6a05a59e2aea 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 9.0E-58 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 BAMF_3284 02cbd5672c0ce07b8f6e5d05cf391705 378 Pfam PF00534 Glycosyl transferases group 1 187 310 3.6E-26 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 BAMF_3284 02cbd5672c0ce07b8f6e5d05cf391705 378 Gene3D G3DSA:3.40.50.2000 201 355 1.3E-31 T 12-10-2018 BAMF_3284 02cbd5672c0ce07b8f6e5d05cf391705 378 Pfam PF13439 Glycosyltransferase Family 4 18 178 2.9E-16 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BAMF_3284 02cbd5672c0ce07b8f6e5d05cf391705 378 SUPERFAMILY SSF53756 7 344 8.37E-56 T 12-10-2018 BAMF_3284 02cbd5672c0ce07b8f6e5d05cf391705 378 Gene3D G3DSA:3.40.50.2000 7 199 7.4E-21 T 12-10-2018 BAMF_0766 d89aeb924d12a688b5d52ade8469122e 219 Pfam PF08756 YfkB-like domain 67 217 3.1E-78 T 12-10-2018 IPR014866 YfkB-like domain BAMF_0766 d89aeb924d12a688b5d52ade8469122e 219 SUPERFAMILY SSF102114 12 176 4.32E-7 T 12-10-2018 BAMF_0766 d89aeb924d12a688b5d52ade8469122e 219 TIGRFAM TIGR04478 rSAM_YfkAB: radical SAM/CxCxxxxC motif protein YfkAB 2 217 1.9E-112 T 12-10-2018 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB BAMF_2590 dbdc7358bc76e4ed96f8903694da1f32 383 SUPERFAMILY SSF54106 2 48 4.84E-12 T 12-10-2018 BAMF_2590 dbdc7358bc76e4ed96f8903694da1f32 383 SMART SM00257 3 48 5.3E-18 T 12-10-2018 IPR018392 LysM domain BAMF_2590 dbdc7358bc76e4ed96f8903694da1f32 383 TIGRFAM TIGR02899 spore_safA: spore coat assembly protein SafA 6 49 2.7E-26 T 12-10-2018 IPR014248 Spore coat assembly protein SafA BAMF_2590 dbdc7358bc76e4ed96f8903694da1f32 383 Gene3D G3DSA:3.10.350.10 1 57 8.4E-17 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_2590 dbdc7358bc76e4ed96f8903694da1f32 383 Pfam PF01476 LysM domain 4 48 2.1E-15 T 12-10-2018 IPR018392 LysM domain BAMF_3071 18861f11847be4113cc164a176944e61 62 TIGRFAM TIGR01669 phage_XkdX: phage uncharacterized protein, XkdX family 2 46 3.4E-26 T 12-10-2018 IPR010022 Protein of unknown function XkdX BAMF_3071 18861f11847be4113cc164a176944e61 62 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 5 46 4.1E-12 T 12-10-2018 IPR010022 Protein of unknown function XkdX BAMF_0485 fb616e35fd36b5d0304d7081eadf1498 195 SUPERFAMILY SSF48498 81 193 1.5E-25 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BAMF_0485 fb616e35fd36b5d0304d7081eadf1498 195 Pfam PF16859 Bacterial transcriptional repressor C-terminal 77 186 2.3E-29 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal BAMF_0485 fb616e35fd36b5d0304d7081eadf1498 195 SUPERFAMILY SSF46689 10 68 2.49E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_0485 fb616e35fd36b5d0304d7081eadf1498 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 7.6E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_0485 fb616e35fd36b5d0304d7081eadf1498 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 7.6E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_0485 fb616e35fd36b5d0304d7081eadf1498 195 Gene3D G3DSA:1.10.10.60 4 58 7.2E-27 T 12-10-2018 BAMF_0485 fb616e35fd36b5d0304d7081eadf1498 195 Gene3D G3DSA:1.10.357.10 59 194 2.7E-36 T 12-10-2018 BAMF_0485 fb616e35fd36b5d0304d7081eadf1498 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 62 3.8E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_3344 b9c1796511c20e9dc5c8a3fecd523055 310 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 306 42.083 T 12-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 BAMF_3344 b9c1796511c20e9dc5c8a3fecd523055 310 Pfam PF02603 HPr Serine kinase N terminus 4 127 1.5E-39 T 12-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 BAMF_3344 b9c1796511c20e9dc5c8a3fecd523055 310 SUPERFAMILY SSF75138 4 131 8.5E-39 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BAMF_3344 b9c1796511c20e9dc5c8a3fecd523055 310 Gene3D G3DSA:3.40.50.300 132 310 1.0E-75 T 12-10-2018 BAMF_3344 b9c1796511c20e9dc5c8a3fecd523055 310 SUPERFAMILY SSF53795 132 298 8.55E-41 T 12-10-2018 BAMF_3344 b9c1796511c20e9dc5c8a3fecd523055 310 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 7 301 2.0E-117 T 12-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 BAMF_3344 b9c1796511c20e9dc5c8a3fecd523055 310 Pfam PF07475 HPr Serine kinase C-terminal domain 130 298 8.8E-77 T 12-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 BAMF_3344 b9c1796511c20e9dc5c8a3fecd523055 310 Gene3D G3DSA:3.40.1390.20 1 131 2.4E-42 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BAMF_1283 a1c5977bd3a415d7824411ae55c40b52 371 Gene3D G3DSA:2.120.10.80 19 239 7.0E-61 T 12-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 BAMF_1283 a1c5977bd3a415d7824411ae55c40b52 371 SUPERFAMILY SSF117281 35 165 3.01E-35 T 12-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 BAMF_1283 a1c5977bd3a415d7824411ae55c40b52 371 SUPERFAMILY SSF117281 142 327 2.09E-43 T 12-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 BAMF_1283 a1c5977bd3a415d7824411ae55c40b52 371 Gene3D G3DSA:2.120.10.80 240 336 1.0E-13 T 12-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 BAMF_1283 a1c5977bd3a415d7824411ae55c40b52 371 SMART SM00612 157 204 1.2E-5 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BAMF_1283 a1c5977bd3a415d7824411ae55c40b52 371 SMART SM00612 105 156 6.3E-9 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BAMF_1283 a1c5977bd3a415d7824411ae55c40b52 371 SMART SM00612 205 251 1.8E-6 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BAMF_1283 a1c5977bd3a415d7824411ae55c40b52 371 SMART SM00612 252 299 0.012 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BAMF_1283 a1c5977bd3a415d7824411ae55c40b52 371 SMART SM00612 58 104 1.4E-9 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BAMF_1283 a1c5977bd3a415d7824411ae55c40b52 371 Pfam PF01344 Kelch motif 198 232 5.0E-8 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BAMF_1283 a1c5977bd3a415d7824411ae55c40b52 371 Pfam PF01344 Kelch motif 48 91 3.4E-13 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BAMF_1283 a1c5977bd3a415d7824411ae55c40b52 371 Pfam PF01344 Kelch motif 146 191 4.2E-10 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BAMF_1283 a1c5977bd3a415d7824411ae55c40b52 371 Pfam PF01344 Kelch motif 94 138 1.4E-11 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BAMF_3609 95ec06b4d5bf0739d46cebb9cbb3a240 400 Gene3D G3DSA:1.20.1720.10 15 393 1.2E-99 T 12-10-2018 BAMF_3609 95ec06b4d5bf0739d46cebb9cbb3a240 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 15 391 3.6E-99 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 BAMF_3609 95ec06b4d5bf0739d46cebb9cbb3a240 400 PRINTS PR01035 Tetracycline resistance protein signature 109 130 3.6E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_3609 95ec06b4d5bf0739d46cebb9cbb3a240 400 PRINTS PR01035 Tetracycline resistance protein signature 25 41 3.6E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_3609 95ec06b4d5bf0739d46cebb9cbb3a240 400 PRINTS PR01035 Tetracycline resistance protein signature 169 189 3.6E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_3609 95ec06b4d5bf0739d46cebb9cbb3a240 400 PRINTS PR01035 Tetracycline resistance protein signature 282 303 3.6E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_3609 95ec06b4d5bf0739d46cebb9cbb3a240 400 PRINTS PR01035 Tetracycline resistance protein signature 82 106 3.6E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_3609 95ec06b4d5bf0739d46cebb9cbb3a240 400 Pfam PF07690 Major Facilitator Superfamily 25 361 4.6E-43 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_3609 95ec06b4d5bf0739d46cebb9cbb3a240 400 SUPERFAMILY SSF103473 13 398 1.57E-61 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3609 95ec06b4d5bf0739d46cebb9cbb3a240 400 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 85 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_3043 ffa5c90df3b5b0457e340776e4b7ec33 454 Gene3D G3DSA:3.20.20.140 54 414 1.0E-138 T 12-10-2018 BAMF_3043 ffa5c90df3b5b0457e340776e4b7ec33 454 Hamap MF_01645 Allantoinase [allB]. 2 446 50.077 T 12-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 BAMF_3043 ffa5c90df3b5b0457e340776e4b7ec33 454 TIGRFAM TIGR03178 allantoinase: allantoinase 4 442 1.3E-177 T 12-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 BAMF_3043 ffa5c90df3b5b0457e340776e4b7ec33 454 Gene3D G3DSA:2.30.40.10 6 429 1.0E-138 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_3043 ffa5c90df3b5b0457e340776e4b7ec33 454 SUPERFAMILY SSF51338 3 443 4.96E-26 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_3043 ffa5c90df3b5b0457e340776e4b7ec33 454 SUPERFAMILY SSF51556 55 375 5.24E-90 T 12-10-2018 IPR032466 Metal-dependent hydrolase BAMF_3043 ffa5c90df3b5b0457e340776e4b7ec33 454 Pfam PF01979 Amidohydrolase family 51 426 2.2E-24 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BAMF_2410 f748ad56ef50c0c182a7cfee2f3c10fe 84 ProDom PD060869 YQFT IG BH1387 13 68 8.0E-21 T 12-10-2018 IPR020277 Protein of unknown function DUF2624 BAMF_2410 f748ad56ef50c0c182a7cfee2f3c10fe 84 Pfam PF11116 Protein of unknown function (DUF2624) 1 83 6.9E-32 T 12-10-2018 IPR020277 Protein of unknown function DUF2624 BAMF_2976 f7ea8baf026224de76ef6e550df654ac 131 SUPERFAMILY SSF160515 4 126 4.84E-39 T 12-10-2018 BAMF_2976 f7ea8baf026224de76ef6e550df654ac 131 Pfam PF07997 Protein of unknown function (DUF1694) 4 118 3.8E-36 T 12-10-2018 IPR012543 Protein of unknown function DUF1694 BAMF_2976 f7ea8baf026224de76ef6e550df654ac 131 PIRSF PIRSF034303 1 129 4.5E-38 T 12-10-2018 IPR012543 Protein of unknown function DUF1694 BAMF_2976 f7ea8baf026224de76ef6e550df654ac 131 Gene3D G3DSA:3.30.1330.30 1 131 8.8E-46 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 SUPERFAMILY SSF51905 1 375 1.48E-60 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 462 2.2E-36 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 2.8E-68 T 12-10-2018 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 2.8E-68 T 12-10-2018 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 286 2.8E-68 T 12-10-2018 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.8E-68 T 12-10-2018 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 415 430 2.8E-68 T 12-10-2018 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 2.8E-68 T 12-10-2018 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.8E-68 T 12-10-2018 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 2.8E-68 T 12-10-2018 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 457 2.8E-68 T 12-10-2018 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 Gene3D G3DSA:3.50.50.60 159 281 7.8E-114 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 1.3E-65 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 Gene3D G3DSA:3.30.390.30 353 473 2.4E-44 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 473 2.8E-180 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 SUPERFAMILY SSF55424 350 472 1.13E-38 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 PIRSF PIRSF000350 1 470 2.2E-84 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 Gene3D G3DSA:3.50.50.60 5 340 7.8E-114 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 1.9E-38 T 12-10-2018 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.9E-38 T 12-10-2018 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 1.9E-38 T 12-10-2018 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 1.9E-38 T 12-10-2018 BAMF_2303 1cff19aa533c989fd1e75212abbb23e4 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 287 1.9E-38 T 12-10-2018 BAMF_2376 f9cf99621bb774816f6a7d6be8b830e2 316 SUPERFAMILY SSF144083 234 295 1.05E-17 T 12-10-2018 BAMF_2376 f9cf99621bb774816f6a7d6be8b830e2 316 Gene3D G3DSA:1.20.58.340 119 239 1.1E-6 T 12-10-2018 BAMF_2376 f9cf99621bb774816f6a7d6be8b830e2 316 Gene3D G3DSA:1.20.58.340 241 298 9.1E-16 T 12-10-2018 BAMF_2376 f9cf99621bb774816f6a7d6be8b830e2 316 SUPERFAMILY SSF143865 57 220 3.66E-8 T 12-10-2018 BAMF_2376 f9cf99621bb774816f6a7d6be8b830e2 316 Pfam PF01544 CorA-like Mg2+ transporter protein 48 293 4.8E-35 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 BAMF_3167 ab068328937f1c5357a24da54f881e29 386 TIGRFAM TIGR03404 bicupin_oxalic: bicupin, oxalate decarboxylase family 16 382 1.6E-180 T 12-10-2018 IPR017774 Bicupin, oxalate decarboxylase/oxidase GO:0033609 KEGG: 00630+4.1.1.2|MetaCyc: PWY-6698 BAMF_3167 ab068328937f1c5357a24da54f881e29 386 Gene3D G3DSA:2.60.120.10 58 231 6.5E-175 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_3167 ab068328937f1c5357a24da54f881e29 386 SUPERFAMILY SSF51182 11 381 3.51E-104 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BAMF_3167 ab068328937f1c5357a24da54f881e29 386 SMART SM00835 55 194 5.3E-21 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 BAMF_3167 ab068328937f1c5357a24da54f881e29 386 SMART SM00835 230 372 2.9E-31 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 BAMF_3167 ab068328937f1c5357a24da54f881e29 386 Gene3D G3DSA:2.60.120.10 10 376 6.5E-175 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_3167 ab068328937f1c5357a24da54f881e29 386 Pfam PF00190 Cupin 63 191 3.2E-24 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 BAMF_3167 ab068328937f1c5357a24da54f881e29 386 Pfam PF00190 Cupin 231 368 8.9E-29 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 BAMF_2420 73a2d122b6a095a294a3185e074a6081 168 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 29 157 2.5E-40 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 BAMF_2420 73a2d122b6a095a294a3185e074a6081 168 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 14 159 30.832 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 BAMF_1676 24d38fa431bedd66c67505aa71b3d744 282 Pfam PF01926 50S ribosome-binding GTPase 123 213 9.9E-17 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_1676 24d38fa431bedd66c67505aa71b3d744 282 SUPERFAMILY SSF52540 9 190 3.61E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1676 24d38fa431bedd66c67505aa71b3d744 282 PIRSF PIRSF006230 1 282 1.4E-104 T 12-10-2018 IPR016478 GTPase, MTG1 BAMF_1676 24d38fa431bedd66c67505aa71b3d744 282 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 278 5.6E-115 T 12-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis BAMF_1676 24d38fa431bedd66c67505aa71b3d744 282 Gene3D G3DSA:1.10.1580.10 180 272 3.3E-29 T 12-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily BAMF_1676 24d38fa431bedd66c67505aa71b3d744 282 Gene3D G3DSA:3.40.50.300 12 179 1.6E-50 T 12-10-2018 BAMF_3631 8e894b2cab90bd613401b8ce3a7e69bf 227 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 7 214 6.2E-85 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BAMF_3631 8e894b2cab90bd613401b8ce3a7e69bf 227 SMART SM00987 50 210 1.6E-33 T 12-10-2018 BAMF_3631 8e894b2cab90bd613401b8ce3a7e69bf 227 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 58 67 - T 12-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BAMF_3631 8e894b2cab90bd613401b8ce3a7e69bf 227 Gene3D G3DSA:3.40.470.10 1 225 1.7E-102 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BAMF_3631 8e894b2cab90bd613401b8ce3a7e69bf 227 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 6 221 40.896 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BAMF_3631 8e894b2cab90bd613401b8ce3a7e69bf 227 SMART SM00986 50 210 1.6E-33 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BAMF_3631 8e894b2cab90bd613401b8ce3a7e69bf 227 SUPERFAMILY SSF52141 4 222 2.11E-93 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BAMF_3631 8e894b2cab90bd613401b8ce3a7e69bf 227 Pfam PF03167 Uracil DNA glycosylase superfamily 54 208 1.2E-23 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BAMF_0200 6f39dd362d1931d9486cd619ef8a3493 83 Pfam PF17334 Sigma-G-dependent sporulation-specific SASP protein 2 83 5.4E-35 T 12-10-2018 IPR020255 Sigma-G-dependent sporulation-specific SASP protein BAMF_0200 6f39dd362d1931d9486cd619ef8a3493 83 ProDom PD059965 SASP SPORULATION-SPECIFIC SIGMA-G-DEPENDENT SPORULATION SPECIFIC CSGA 2 82 1.0E-26 T 12-10-2018 IPR020255 Sigma-G-dependent sporulation-specific SASP protein BAMF_2216 fe22bbbf6e95e97f702d0b90a6056cf8 178 Pfam PF07670 Nucleoside recognition 46 146 8.3E-6 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BAMF_1040 887f62ffc87b485e7c7446f60ea3e370 369 SUPERFAMILY SSF48256 4 367 1.83E-116 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 BAMF_1040 887f62ffc87b485e7c7446f60ea3e370 369 Pfam PF00285 Citrate synthase, C-terminal domain 7 354 4.1E-112 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_1040 887f62ffc87b485e7c7446f60ea3e370 369 ProSitePatterns PS00480 Citrate synthase signature. 251 263 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BAMF_1040 887f62ffc87b485e7c7446f60ea3e370 369 Gene3D G3DSA:1.10.580.10 18 345 1.2E-127 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BAMF_1040 887f62ffc87b485e7c7446f60ea3e370 369 PRINTS PR00143 Citrate synthase signature 191 219 5.4E-34 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_1040 887f62ffc87b485e7c7446f60ea3e370 369 PRINTS PR00143 Citrate synthase signature 325 339 5.4E-34 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_1040 887f62ffc87b485e7c7446f60ea3e370 369 PRINTS PR00143 Citrate synthase signature 120 133 5.4E-34 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_1040 887f62ffc87b485e7c7446f60ea3e370 369 PRINTS PR00143 Citrate synthase signature 169 184 5.4E-34 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_1040 887f62ffc87b485e7c7446f60ea3e370 369 PRINTS PR00143 Citrate synthase signature 305 321 5.4E-34 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_1040 887f62ffc87b485e7c7446f60ea3e370 369 PRINTS PR00143 Citrate synthase signature 244 264 5.4E-34 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BAMF_1040 887f62ffc87b485e7c7446f60ea3e370 369 PIRSF PIRSF001369 1 369 3.7E-131 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type BAMF_1040 887f62ffc87b485e7c7446f60ea3e370 369 Gene3D G3DSA:1.10.230.10 217 319 1.2E-127 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain BAMF_3234 5a96a8f92765da909cd7d9561ebd0ba3 305 Gene3D G3DSA:3.40.190.10 37 299 5.6E-98 T 12-10-2018 BAMF_3234 5a96a8f92765da909cd7d9561ebd0ba3 305 Gene3D G3DSA:3.40.190.120 139 243 5.6E-98 T 12-10-2018 BAMF_3234 5a96a8f92765da909cd7d9561ebd0ba3 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 300 6.6E-61 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 BAMF_3234 5a96a8f92765da909cd7d9561ebd0ba3 305 SUPERFAMILY SSF53850 34 303 3.89E-68 T 12-10-2018 BAMF_2328 84c0db6dec04ede36e95dcae227c78db 576 Pfam PF13476 AAA domain 4 231 1.7E-18 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain BAMF_2328 84c0db6dec04ede36e95dcae227c78db 576 Gene3D G3DSA:3.40.50.300 251 568 3.9E-55 T 12-10-2018 BAMF_2328 84c0db6dec04ede36e95dcae227c78db 576 PIRSF PIRSF003128 1 572 1.5E-197 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 BAMF_2328 84c0db6dec04ede36e95dcae227c78db 576 Gene3D G3DSA:3.40.50.300 1 226 7.9E-44 T 12-10-2018 BAMF_2328 84c0db6dec04ede36e95dcae227c78db 576 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 568 1.8E-222 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 BAMF_2328 84c0db6dec04ede36e95dcae227c78db 576 SUPERFAMILY SSF52540 2 532 4.91E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0506 5262422ccebba7aacee52242e4a21137 205 Pfam PF00293 NUDIX domain 73 179 3.6E-11 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BAMF_0506 5262422ccebba7aacee52242e4a21137 205 SUPERFAMILY SSF55811 43 200 1.22E-27 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BAMF_0506 5262422ccebba7aacee52242e4a21137 205 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 3 58 1.4E-23 T 12-10-2018 BAMF_0506 5262422ccebba7aacee52242e4a21137 205 Gene3D G3DSA:3.90.79.10 42 205 1.2E-41 T 12-10-2018 BAMF_0448 f5309cf029f5a744b51c70e7fec6c734 109 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 105 5.2E-30 T 12-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 BAMF_0448 f5309cf029f5a744b51c70e7fec6c734 109 SUPERFAMILY SSF52091 15 101 2.94E-21 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_0448 f5309cf029f5a744b51c70e7fec6c734 109 Gene3D G3DSA:3.30.750.24 14 109 2.9E-21 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_0448 f5309cf029f5a744b51c70e7fec6c734 109 Pfam PF01740 STAS domain 6 99 8.0E-15 T 12-10-2018 IPR002645 STAS domain BAMF_1492 c2afc4502338ae7ff02647efa646ba25 297 SUPERFAMILY SSF110296 8 190 2.49E-17 T 12-10-2018 BAMF_1492 c2afc4502338ae7ff02647efa646ba25 297 Gene3D G3DSA:2.130.10.10 2 154 1.3E-7 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BAMF_2547 97fe1f32b3dacb2ee2c3ad2d065b47ed 138 SUPERFAMILY SSF53098 1 137 2.88E-45 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BAMF_2547 97fe1f32b3dacb2ee2c3ad2d065b47ed 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 138 27.916 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BAMF_2547 97fe1f32b3dacb2ee2c3ad2d065b47ed 138 Gene3D G3DSA:3.30.420.140 1 138 1.2E-52 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 BAMF_2547 97fe1f32b3dacb2ee2c3ad2d065b47ed 138 SMART SM00732 1 103 8.6E-41 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 BAMF_2547 97fe1f32b3dacb2ee2c3ad2d065b47ed 138 Pfam PF03652 Holliday junction resolvase 1 136 6.0E-45 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BAMF_2547 97fe1f32b3dacb2ee2c3ad2d065b47ed 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 135 4.8E-60 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BAMF_3841 7ab38d48a9c21a7937773c58a0bd4a13 157 Gene3D G3DSA:3.40.630.30 2 156 7.9E-46 T 12-10-2018 BAMF_3841 7ab38d48a9c21a7937773c58a0bd4a13 157 Pfam PF00583 Acetyltransferase (GNAT) family 43 145 7.7E-17 T 12-10-2018 IPR000182 GNAT domain BAMF_3841 7ab38d48a9c21a7937773c58a0bd4a13 157 SUPERFAMILY SSF55729 3 151 2.87E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_3313 3a1a5004570aed70e2848fd57dc575be 191 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 7.5E-80 T 12-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG BAMF_3313 3a1a5004570aed70e2848fd57dc575be 191 SUPERFAMILY SSF102405 1 179 1.04E-58 T 12-10-2018 BAMF_3313 3a1a5004570aed70e2848fd57dc575be 191 Pfam PF03641 Possible lysine decarboxylase 46 176 1.2E-41 T 12-10-2018 IPR031100 LOG family BAMF_3313 3a1a5004570aed70e2848fd57dc575be 191 Gene3D G3DSA:3.40.50.450 1 191 9.0E-78 T 12-10-2018 BAMF_1088 d66b66bdcb7022cbec21660461a5cafb 28 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 5 27 9.4E-13 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BAMF_1088 d66b66bdcb7022cbec21660461a5cafb 28 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 5 27 3.5E-11 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BAMF_3410 984a2e40a1016b1d6e56da38c791d431 275 Pfam PF01061 ABC-2 type transporter 18 233 2.4E-26 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 BAMF_3917 97151fbca0919c5967dc7ead48a0043e 628 SUPERFAMILY SSF51905 7 261 3.84E-47 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_3917 97151fbca0919c5967dc7ead48a0043e 628 Pfam PF01134 Glucose inhibited division protein A 9 399 3.5E-170 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 BAMF_3917 97151fbca0919c5967dc7ead48a0043e 628 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BAMF_3917 97151fbca0919c5967dc7ead48a0043e 628 Gene3D G3DSA:3.50.50.60 296 458 9.7E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_3917 97151fbca0919c5967dc7ead48a0043e 628 Gene3D G3DSA:3.50.50.60 2 221 1.5E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_3917 97151fbca0919c5967dc7ead48a0043e 628 Gene3D G3DSA:1.10.150.570 568 620 8.5E-24 T 12-10-2018 BAMF_3917 97151fbca0919c5967dc7ead48a0043e 628 Gene3D G3DSA:1.10.10.1800 459 549 1.1E-25 T 12-10-2018 BAMF_3917 97151fbca0919c5967dc7ead48a0043e 628 Pfam PF13932 GidA associated domain 401 615 8.3E-80 T 12-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 BAMF_3917 97151fbca0919c5967dc7ead48a0043e 628 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 620 2.4E-299 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 BAMF_3917 97151fbca0919c5967dc7ead48a0043e 628 SMART SM01228 545 616 1.0E-41 T 12-10-2018 BAMF_3917 97151fbca0919c5967dc7ead48a0043e 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 3.9E-6 T 12-10-2018 BAMF_3917 97151fbca0919c5967dc7ead48a0043e 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 3.9E-6 T 12-10-2018 BAMF_3917 97151fbca0919c5967dc7ead48a0043e 628 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BAMF_3917 97151fbca0919c5967dc7ead48a0043e 628 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 623 42.37 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 BAMF_2099 e7f4f82a2efc49a798b2de221e79bcb0 131 SUPERFAMILY SSF53098 1 124 5.56E-28 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BAMF_2099 e7f4f82a2efc49a798b2de221e79bcb0 131 Gene3D G3DSA:3.30.420.10 4 130 7.4E-29 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BAMF_2099 e7f4f82a2efc49a798b2de221e79bcb0 131 Pfam PF13456 Reverse transcriptase-like 8 126 6.1E-18 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 BAMF_0685 cc4ead51a848b0bfcf056e5c688d30dc 229 Gene3D G3DSA:3.30.240.20 80 153 3.3E-22 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_0685 cc4ead51a848b0bfcf056e5c688d30dc 229 Pfam PF04239 Protein of unknown function (DUF421) 88 204 7.9E-30 T 12-10-2018 IPR007353 Protein of unknown function DUF421 BAMF_0685 cc4ead51a848b0bfcf056e5c688d30dc 229 Gene3D G3DSA:3.30.240.20 168 229 5.8E-20 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_3809 d59e1c9a7ec32c74a196e5e8420b8b08 320 Pfam PF08279 HTH domain 8 60 2.2E-11 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BAMF_3809 d59e1c9a7ec32c74a196e5e8420b8b08 320 Gene3D G3DSA:1.10.10.10 1 63 1.8E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3809 d59e1c9a7ec32c74a196e5e8420b8b08 320 SUPERFAMILY SSF46785 2 63 7.37E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1146 793964bdb38b29018d20ba3d14022872 175 Pfam PF02915 Rubrerythrin 93 140 3.7E-5 T 12-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 BAMF_1146 793964bdb38b29018d20ba3d14022872 175 Gene3D G3DSA:1.20.1260.10 16 86 1.4E-5 T 12-10-2018 IPR012347 Ferritin-like BAMF_1146 793964bdb38b29018d20ba3d14022872 175 Gene3D G3DSA:1.20.5.420 93 139 6.2E-9 T 12-10-2018 BAMF_1146 793964bdb38b29018d20ba3d14022872 175 SUPERFAMILY SSF47240 18 140 1.48E-23 T 12-10-2018 IPR009078 Ferritin-like superfamily BAMF_2813 9af250d0ae4a894b8144a2944c2d1a86 103 Gene3D G3DSA:3.40.250.10 3 99 1.6E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BAMF_2813 9af250d0ae4a894b8144a2944c2d1a86 103 SMART SM00450 7 101 1.5E-20 T 12-10-2018 IPR001763 Rhodanese-like domain BAMF_2813 9af250d0ae4a894b8144a2944c2d1a86 103 SUPERFAMILY SSF52821 2 99 2.36E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BAMF_2813 9af250d0ae4a894b8144a2944c2d1a86 103 Pfam PF00581 Rhodanese-like domain 10 96 9.1E-14 T 12-10-2018 IPR001763 Rhodanese-like domain BAMF_2608 94a40dae6e0bccaaba221b9dd5d02efa 287 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 284 1.1E-105 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BAMF_2608 94a40dae6e0bccaaba221b9dd5d02efa 287 Gene3D G3DSA:2.40.10.350 186 264 1.6E-25 T 12-10-2018 BAMF_2608 94a40dae6e0bccaaba221b9dd5d02efa 287 Gene3D G3DSA:2.40.10.340 109 185 1.3E-20 T 12-10-2018 BAMF_2608 94a40dae6e0bccaaba221b9dd5d02efa 287 PIRSF PIRSF038471 1 286 4.9E-60 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BAMF_2608 94a40dae6e0bccaaba221b9dd5d02efa 287 Pfam PF04085 rod shape-determining protein MreC 119 276 1.3E-42 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BAMF_0026 4a7ac1331a80af6faf42f4003cac53d3 371 Pfam PF05816 Toxic anion resistance protein (TelA) 33 362 1.8E-116 T 12-10-2018 IPR008863 Toxic anion resistance BAMF_0026 4a7ac1331a80af6faf42f4003cac53d3 371 PIRSF PIRSF026508 2 367 2.0E-119 T 12-10-2018 IPR008863 Toxic anion resistance BAMF_3429 f8037460b48bd451efa2a1342b22bf15 149 TIGRFAM TIGR04011 poly_gGlu_PgsC: poly-gamma-glutamate biosynthesis protein PgsC 10 139 8.5E-44 T 12-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 BAMF_3429 f8037460b48bd451efa2a1342b22bf15 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 118 132 3.9E-48 T 12-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 BAMF_3429 f8037460b48bd451efa2a1342b22bf15 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 20 37 3.9E-48 T 12-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 BAMF_3429 f8037460b48bd451efa2a1342b22bf15 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 88 101 3.9E-48 T 12-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 BAMF_3429 f8037460b48bd451efa2a1342b22bf15 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 66 80 3.9E-48 T 12-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 BAMF_3429 f8037460b48bd451efa2a1342b22bf15 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 2 17 3.9E-48 T 12-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 BAMF_3429 f8037460b48bd451efa2a1342b22bf15 149 Pfam PF14102 Capsule biosynthesis CapC 12 128 3.2E-39 T 12-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 BAMF_3257 bd6ec0560ff5cd610af8a178c004625d 344 Gene3D G3DSA:3.40.50.1360 90 340 1.7E-89 T 12-10-2018 BAMF_3257 bd6ec0560ff5cd610af8a178c004625d 344 Pfam PF04198 Putative sugar-binding domain 91 337 1.6E-75 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 BAMF_3257 bd6ec0560ff5cd610af8a178c004625d 344 Gene3D G3DSA:1.10.10.10 19 89 1.9E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3257 bd6ec0560ff5cd610af8a178c004625d 344 SUPERFAMILY SSF100950 90 337 2.75E-66 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BAMF_3257 bd6ec0560ff5cd610af8a178c004625d 344 SUPERFAMILY SSF46785 19 81 1.34E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3412 6b369ab40d9d79d398a8699e140c36af 672 Gene3D G3DSA:3.40.50.2000 16 135 2.5E-10 T 12-10-2018 BAMF_3412 6b369ab40d9d79d398a8699e140c36af 672 Gene3D G3DSA:3.40.50.2000 187 342 3.3E-13 T 12-10-2018 BAMF_3412 6b369ab40d9d79d398a8699e140c36af 672 Pfam PF09318 Glycosyl transferase 1 domain A 18 215 3.6E-62 T 12-10-2018 IPR015397 Glycosyl transferase 1, domain A BAMF_3412 6b369ab40d9d79d398a8699e140c36af 672 SUPERFAMILY SSF53756 238 514 6.85E-45 T 12-10-2018 BAMF_3412 6b369ab40d9d79d398a8699e140c36af 672 Gene3D G3DSA:3.40.50.2000 343 507 5.6E-39 T 12-10-2018 BAMF_3412 6b369ab40d9d79d398a8699e140c36af 672 Pfam PF00534 Glycosyl transferases group 1 336 499 2.0E-37 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 BAMF_3051 c8706159e088d388587d95ec7142564b 242 SMART SM00866 94 234 2.7E-26 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BAMF_3051 c8706159e088d388587d95ec7142564b 242 SUPERFAMILY SSF64288 61 238 6.28E-42 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BAMF_3051 c8706159e088d388587d95ec7142564b 242 Pfam PF07702 UTRA domain 95 233 1.5E-30 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BAMF_3051 c8706159e088d388587d95ec7142564b 242 Gene3D G3DSA:1.10.10.10 9 77 2.2E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3051 c8706159e088d388587d95ec7142564b 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 8.2E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3051 c8706159e088d388587d95ec7142564b 242 SUPERFAMILY SSF46785 3 82 9.6E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3051 c8706159e088d388587d95ec7142564b 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 6.0E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3051 c8706159e088d388587d95ec7142564b 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 6.0E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3051 c8706159e088d388587d95ec7142564b 242 SMART SM00345 14 73 2.2E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BAMF_3051 c8706159e088d388587d95ec7142564b 242 Gene3D G3DSA:3.40.1410.10 78 242 1.0E-37 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BAMF_2037 d36b3062e2057dffc5703e71b0ce2697 272 SUPERFAMILY SSF55166 106 257 5.76E-42 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BAMF_2037 d36b3062e2057dffc5703e71b0ce2697 272 Gene3D G3DSA:3.30.1380.10 57 272 4.0E-93 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BAMF_2037 d36b3062e2057dffc5703e71b0ce2697 272 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 120 249 1.2E-44 T 12-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 BAMF_2085 7e1e3dfc4849180121f978a56009432d 256 Pfam PF04445 Putative SAM-dependent methyltransferase 42 224 3.1E-15 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 BAMF_2085 7e1e3dfc4849180121f978a56009432d 256 SUPERFAMILY SSF53335 1 253 7.97E-52 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_2085 7e1e3dfc4849180121f978a56009432d 256 Gene3D G3DSA:3.40.50.150 65 247 1.1E-38 T 12-10-2018 BAMF_1940 e3b9a2876b0d4127e2a61d0cf1e5ac9e 491 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 308 330 2.0E-24 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_1940 e3b9a2876b0d4127e2a61d0cf1e5ac9e 491 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 365 379 2.0E-24 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_1940 e3b9a2876b0d4127e2a61d0cf1e5ac9e 491 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 447 460 2.0E-24 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_1940 e3b9a2876b0d4127e2a61d0cf1e5ac9e 491 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 77 96 2.0E-24 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_1940 e3b9a2876b0d4127e2a61d0cf1e5ac9e 491 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 380 394 2.0E-24 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_1940 e3b9a2876b0d4127e2a61d0cf1e5ac9e 491 Gene3D G3DSA:3.40.710.10 31 101 3.9E-6 T 12-10-2018 BAMF_1940 e3b9a2876b0d4127e2a61d0cf1e5ac9e 491 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 65 470 3.4E-132 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_1940 e3b9a2876b0d4127e2a61d0cf1e5ac9e 491 Gene3D G3DSA:3.40.710.10 262 491 1.2E-53 T 12-10-2018 BAMF_1940 e3b9a2876b0d4127e2a61d0cf1e5ac9e 491 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 36 490 2.9E-142 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_1940 e3b9a2876b0d4127e2a61d0cf1e5ac9e 491 SUPERFAMILY SSF56601 36 489 3.89E-100 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_1940 e3b9a2876b0d4127e2a61d0cf1e5ac9e 491 Gene3D G3DSA:3.50.80.20 102 193 4.3E-25 T 12-10-2018 BAMF_3919 a5d7e1087c368e8844e6e7421587781d 213 Pfam PF13083 KH domain 68 129 4.7E-12 T 12-10-2018 BAMF_3919 a5d7e1087c368e8844e6e7421587781d 213 SUPERFAMILY SSF54814 72 119 6.41E-5 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BAMF_3919 a5d7e1087c368e8844e6e7421587781d 213 Pfam PF14804 Jag N-terminus 8 55 2.4E-18 T 12-10-2018 IPR032782 Jag, N-terminal BAMF_3919 a5d7e1087c368e8844e6e7421587781d 213 Gene3D G3DSA:3.30.1370.50 141 213 6.9E-26 T 12-10-2018 IPR036867 R3H domain superfamily GO:0003676 BAMF_3919 a5d7e1087c368e8844e6e7421587781d 213 SUPERFAMILY SSF82708 148 205 8.63E-11 T 12-10-2018 IPR036867 R3H domain superfamily GO:0003676 BAMF_3919 a5d7e1087c368e8844e6e7421587781d 213 Pfam PF01424 R3H domain 145 203 3.8E-16 T 12-10-2018 IPR001374 R3H domain GO:0003676 BAMF_3919 a5d7e1087c368e8844e6e7421587781d 213 Gene3D G3DSA:3.30.30.80 1 57 6.6E-18 T 12-10-2018 IPR038247 Jag, N-terminal domain superfamily BAMF_3919 a5d7e1087c368e8844e6e7421587781d 213 SMART SM00393 126 205 9.5E-26 T 12-10-2018 IPR001374 R3H domain GO:0003676 BAMF_3919 a5d7e1087c368e8844e6e7421587781d 213 Gene3D G3DSA:3.30.300.20 58 140 3.4E-21 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BAMF_3919 a5d7e1087c368e8844e6e7421587781d 213 SMART SM01245 5 57 5.8E-21 T 12-10-2018 IPR032782 Jag, N-terminal BAMF_3423 c9bcaedffe66910ceaff9843f7fa1336 328 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 95 243 8.4E-42 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain BAMF_3423 c9bcaedffe66910ceaff9843f7fa1336 328 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 94 243 4.5E-37 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain BAMF_3423 c9bcaedffe66910ceaff9843f7fa1336 328 Gene3D G3DSA:1.10.260.150 59 328 9.6E-79 T 12-10-2018 BAMF_2436 26ee6eca4f12be018db3b35a4ebab744 438 Pfam PF01957 NfeD-like C-terminal, partner-binding 290 437 5.7E-17 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain BAMF_2436 26ee6eca4f12be018db3b35a4ebab744 438 SUPERFAMILY SSF52096 13 195 1.01E-24 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_2436 26ee6eca4f12be018db3b35a4ebab744 438 Gene3D G3DSA:2.40.50.140 377 438 3.1E-7 T 12-10-2018 BAMF_2436 26ee6eca4f12be018db3b35a4ebab744 438 Gene3D G3DSA:3.90.226.10 26 237 1.1E-46 T 12-10-2018 BAMF_2436 26ee6eca4f12be018db3b35a4ebab744 438 SUPERFAMILY SSF141322 378 437 4.45E-5 T 12-10-2018 BAMF_2436 26ee6eca4f12be018db3b35a4ebab744 438 Pfam PF01972 Serine dehydrogenase proteinase 66 126 4.4E-6 T 12-10-2018 IPR002825 Peptidase S49, serine-peptidase prokaryotes GO:0016021 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 SUPERFAMILY SSF48264 10 403 4.19E-93 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 345 354 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 Pfam PF00067 Cytochrome P450 185 381 1.6E-22 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 Gene3D G3DSA:1.10.630.10 2 403 3.5E-137 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 PRINTS PR00385 P450 superfamily signature 352 363 3.2E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 PRINTS PR00385 P450 superfamily signature 343 352 3.2E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 PRINTS PR00385 P450 superfamily signature 276 287 3.2E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 PRINTS PR00385 P450 superfamily signature 241 258 3.2E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 PRINTS PR00359 B-class P450 signature 352 363 7.4E-58 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 PRINTS PR00359 B-class P450 signature 343 352 7.4E-58 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 PRINTS PR00359 B-class P450 signature 195 217 7.4E-58 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 PRINTS PR00359 B-class P450 signature 157 172 7.4E-58 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 PRINTS PR00359 B-class P450 signature 276 287 7.4E-58 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 PRINTS PR00359 B-class P450 signature 94 105 7.4E-58 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 PRINTS PR00359 B-class P450 signature 140 156 7.4E-58 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 PRINTS PR00359 B-class P450 signature 294 321 7.4E-58 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1791 2d6c0149cb37260bd4922e0d54217d71 403 PRINTS PR00359 B-class P450 signature 322 337 7.4E-58 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BAMF_1708 ec7339e1d72ea36d16564cf1b07dacd2 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.2E-30 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BAMF_1708 ec7339e1d72ea36d16564cf1b07dacd2 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.8E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BAMF_1708 ec7339e1d72ea36d16564cf1b07dacd2 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.8E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BAMF_1708 ec7339e1d72ea36d16564cf1b07dacd2 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.8E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BAMF_1708 ec7339e1d72ea36d16564cf1b07dacd2 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 3 87 1.2E-33 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 BAMF_1708 ec7339e1d72ea36d16564cf1b07dacd2 89 PIRSF PIRSF004669 1 89 6.1E-34 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BAMF_1687 f3ebbefca31c7136250d6c805d8a479f 467 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 6 467 2.4E-226 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BAMF_1687 f3ebbefca31c7136250d6c805d8a479f 467 Gene3D G3DSA:1.10.8.60 359 464 1.2E-40 T 12-10-2018 BAMF_1687 f3ebbefca31c7136250d6c805d8a479f 467 SMART SM00382 51 360 6.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1687 f3ebbefca31c7136250d6c805d8a479f 467 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 55 108 5.5E-7 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BAMF_1687 f3ebbefca31c7136250d6c805d8a479f 467 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 359 429 4.1E-8 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BAMF_1687 f3ebbefca31c7136250d6c805d8a479f 467 SMART SM01086 359 453 4.7E-26 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BAMF_1687 f3ebbefca31c7136250d6c805d8a479f 467 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 3 467 44.23 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BAMF_1687 f3ebbefca31c7136250d6c805d8a479f 467 SUPERFAMILY SSF52540 6 465 8.18E-93 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1687 f3ebbefca31c7136250d6c805d8a479f 467 Pfam PF07724 AAA domain (Cdc48 subfamily) 212 353 8.7E-43 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BAMF_0021 dc7ac0ab177d4f7ae0ab3eab6a0c2efa 107 Pfam PF02575 YbaB/EbfC DNA-binding family 12 102 4.0E-35 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BAMF_0021 dc7ac0ab177d4f7ae0ab3eab6a0c2efa 107 SUPERFAMILY SSF82607 12 106 2.09E-34 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BAMF_0021 dc7ac0ab177d4f7ae0ab3eab6a0c2efa 107 PIRSF PIRSF004555 4 107 9.2E-41 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BAMF_0021 dc7ac0ab177d4f7ae0ab3eab6a0c2efa 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 6 100 23.52 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BAMF_0021 dc7ac0ab177d4f7ae0ab3eab6a0c2efa 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 106 5.1E-35 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BAMF_0021 dc7ac0ab177d4f7ae0ab3eab6a0c2efa 107 Gene3D G3DSA:3.30.1310.10 2 107 4.9E-40 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BAMF_2135 2ece8da4d8a7af8f80f9258cfca1d678 232 Gene3D G3DSA:1.10.10.10 1 115 7.4E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2135 2ece8da4d8a7af8f80f9258cfca1d678 232 SUPERFAMILY SSF158499 130 195 1.1E-18 T 12-10-2018 IPR034829 DnaD-like domain superfamily BAMF_2135 2ece8da4d8a7af8f80f9258cfca1d678 232 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 129 201 3.1E-25 T 12-10-2018 IPR006343 DnaD domain BAMF_2135 2ece8da4d8a7af8f80f9258cfca1d678 232 Gene3D G3DSA:1.10.10.630 124 200 4.6E-30 T 12-10-2018 IPR034829 DnaD-like domain superfamily BAMF_2135 2ece8da4d8a7af8f80f9258cfca1d678 232 Pfam PF07261 Replication initiation and membrane attachment 131 202 2.8E-24 T 12-10-2018 IPR006343 DnaD domain BAMF_1856 07162f8146faef181b4348755f75df72 159 ProDom PD034585 YOAO YDHH MEMBRANE PRECURSOR TRANSMEMBRANE SIGNAL 23 157 3.0E-31 T 12-10-2018 IPR032545 Protein of unknown function DUF4944 BAMF_1856 07162f8146faef181b4348755f75df72 159 Pfam PF16302 Domain of unknown function (DUF4944) 31 159 5.0E-40 T 12-10-2018 IPR032545 Protein of unknown function DUF4944 BAMF_0131 ab2674d99618d43fa138569b412f03f5 179 PIRSF PIRSF002162 1 178 5.0E-46 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0131 ab2674d99618d43fa138569b412f03f5 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 38.357 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BAMF_0131 ab2674d99618d43fa138569b412f03f5 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0131 ab2674d99618d43fa138569b412f03f5 179 Gene3D G3DSA:3.90.930.12 84 179 4.4E-40 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0131 ab2674d99618d43fa138569b412f03f5 179 PRINTS PR00059 Ribosomal protein L6 signature 142 163 1.7E-34 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BAMF_0131 ab2674d99618d43fa138569b412f03f5 179 PRINTS PR00059 Ribosomal protein L6 signature 100 116 1.7E-34 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BAMF_0131 ab2674d99618d43fa138569b412f03f5 179 PRINTS PR00059 Ribosomal protein L6 signature 72 97 1.7E-34 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BAMF_0131 ab2674d99618d43fa138569b412f03f5 179 Pfam PF00347 Ribosomal protein L6 11 83 7.3E-22 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0131 ab2674d99618d43fa138569b412f03f5 179 Pfam PF00347 Ribosomal protein L6 91 165 8.1E-21 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0131 ab2674d99618d43fa138569b412f03f5 179 SUPERFAMILY SSF56053 1 83 6.94E-26 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0131 ab2674d99618d43fa138569b412f03f5 179 Gene3D G3DSA:3.90.930.12 2 83 4.2E-30 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0131 ab2674d99618d43fa138569b412f03f5 179 SUPERFAMILY SSF56053 84 177 3.17E-34 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0131 ab2674d99618d43fa138569b412f03f5 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 5.1E-75 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BAMF_2809 7feb7cd38d76f19755582769204e0c3b 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 294 2.7E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_2809 7feb7cd38d76f19755582769204e0c3b 304 Gene3D G3DSA:1.10.3720.10 60 303 8.3E-69 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2809 7feb7cd38d76f19755582769204e0c3b 304 SUPERFAMILY SSF160964 23 65 5.23E-5 T 12-10-2018 BAMF_2809 7feb7cd38d76f19755582769204e0c3b 304 SUPERFAMILY SSF161098 66 289 9.55E-62 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2586 271d5a35e3098928c275ebdd239c7e4c 169 Gene3D G3DSA:3.10.20.420 37 91 1.3E-25 T 12-10-2018 IPR038118 Bypass-of-forespore C, N-terminal domain superfamily BAMF_2586 271d5a35e3098928c275ebdd239c7e4c 169 Pfam PF08955 BofC C-terminal domain 92 165 1.6E-25 T 12-10-2018 IPR015050 Bypass of forespore C, C-terminal BAMF_2586 271d5a35e3098928c275ebdd239c7e4c 169 Gene3D G3DSA:3.30.70.1740 92 169 1.2E-27 T 12-10-2018 IPR038117 Bypass of forespore C, C-terminal domain superfamily BAMF_2586 271d5a35e3098928c275ebdd239c7e4c 169 Pfam PF08977 Bypass of Forespore C, N terminal 40 89 1.2E-24 T 12-10-2018 IPR015071 Bypass-of-forespore C, N-terminal BAMF_2077 8d840648a90d9d88414838a5428eb8f4 83 Pfam PF10751 Protein of unknown function (DUF2535) 1 83 5.4E-36 T 12-10-2018 IPR019687 Protein of unknown function DUF2535 BAMF_0382 16a403026566b5d4adf9b7bfcf1efb1b 300 Gene3D G3DSA:3.20.20.100 2 300 1.0E-96 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_0382 16a403026566b5d4adf9b7bfcf1efb1b 300 PRINTS PR00069 Aldo-keto reductase signature 112 130 3.1E-5 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_0382 16a403026566b5d4adf9b7bfcf1efb1b 300 PRINTS PR00069 Aldo-keto reductase signature 143 160 3.1E-5 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_0382 16a403026566b5d4adf9b7bfcf1efb1b 300 Pfam PF00248 Aldo/keto reductase family 15 290 3.7E-57 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain BAMF_0382 16a403026566b5d4adf9b7bfcf1efb1b 300 SUPERFAMILY SSF51430 3 297 1.15E-71 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_1960 2223461151a89b50f69b67ace8741e99 136 Pfam PF04239 Protein of unknown function (DUF421) 12 109 5.0E-22 T 12-10-2018 IPR007353 Protein of unknown function DUF421 BAMF_1960 2223461151a89b50f69b67ace8741e99 136 Gene3D G3DSA:3.30.240.20 9 58 4.6E-9 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_1960 2223461151a89b50f69b67ace8741e99 136 Gene3D G3DSA:3.30.240.20 74 135 7.7E-16 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_3823 2223461151a89b50f69b67ace8741e99 136 Pfam PF04239 Protein of unknown function (DUF421) 12 109 5.0E-22 T 12-10-2018 IPR007353 Protein of unknown function DUF421 BAMF_3823 2223461151a89b50f69b67ace8741e99 136 Gene3D G3DSA:3.30.240.20 9 58 4.6E-9 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_3823 2223461151a89b50f69b67ace8741e99 136 Gene3D G3DSA:3.30.240.20 74 135 7.7E-16 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_1844 2223461151a89b50f69b67ace8741e99 136 Pfam PF04239 Protein of unknown function (DUF421) 12 109 5.0E-22 T 12-10-2018 IPR007353 Protein of unknown function DUF421 BAMF_1844 2223461151a89b50f69b67ace8741e99 136 Gene3D G3DSA:3.30.240.20 9 58 4.6E-9 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_1844 2223461151a89b50f69b67ace8741e99 136 Gene3D G3DSA:3.30.240.20 74 135 7.7E-16 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_3036 94806065662fdcd9140f2bc33fb43663 298 Hamap MF_00206 Lipoyl synthase [lipA]. 1 295 148.407 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BAMF_3036 94806065662fdcd9140f2bc33fb43663 298 SMART SM00729 57 265 7.2E-16 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BAMF_3036 94806065662fdcd9140f2bc33fb43663 298 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 3 45 1.0E-11 T 12-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BAMF_3036 94806065662fdcd9140f2bc33fb43663 298 SUPERFAMILY SSF102114 20 287 4.97E-63 T 12-10-2018 BAMF_3036 94806065662fdcd9140f2bc33fb43663 298 PIRSF PIRSF005963 1 298 2.9E-135 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BAMF_3036 94806065662fdcd9140f2bc33fb43663 298 Gene3D G3DSA:3.20.20.70 13 266 4.1E-21 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_3036 94806065662fdcd9140f2bc33fb43663 298 TIGRFAM TIGR00510 lipA: lipoyl synthase 3 293 2.7E-120 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BAMF_3036 94806065662fdcd9140f2bc33fb43663 298 Pfam PF04055 Radical SAM superfamily 64 224 1.5E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BAMF_2663 fc6b55afae464c3d2db677449bc50544 134 Pfam PF03994 Domain of Unknown Function (DUF350) 15 68 3.4E-12 T 12-10-2018 IPR007140 Protein of unknown function DUF350 BAMF_2663 fc6b55afae464c3d2db677449bc50544 134 Pfam PF03994 Domain of Unknown Function (DUF350) 80 134 1.0E-15 T 12-10-2018 IPR007140 Protein of unknown function DUF350 BAMF_3784 e62f3b82410f5ac5b0031677337b31d5 298 Hamap MF_01672 Inosose dehydratase [iolE]. 1 295 56.859 T 12-10-2018 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 BAMF_3784 e62f3b82410f5ac5b0031677337b31d5 298 Gene3D G3DSA:3.20.20.150 2 295 6.5E-80 T 12-10-2018 BAMF_3784 e62f3b82410f5ac5b0031677337b31d5 298 SUPERFAMILY SSF51658 7 290 2.35E-55 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily BAMF_3784 e62f3b82410f5ac5b0031677337b31d5 298 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 6 291 8.6E-119 T 12-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 BAMF_3784 e62f3b82410f5ac5b0031677337b31d5 298 Pfam PF01261 Xylose isomerase-like TIM barrel 55 231 1.9E-23 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain BAMF_1864 9bbacaa9c06bf72f6bd47e6e720bc562 144 Gene3D G3DSA:2.70.40.10 1 144 2.0E-42 T 12-10-2018 IPR036157 dUTPase-like superfamily BAMF_1864 9bbacaa9c06bf72f6bd47e6e720bc562 144 SUPERFAMILY SSF51283 16 143 1.83E-26 T 12-10-2018 IPR036157 dUTPase-like superfamily BAMF_1864 9bbacaa9c06bf72f6bd47e6e720bc562 144 Pfam PF00692 dUTPase 27 141 8.5E-16 T 12-10-2018 IPR029054 dUTPase-like BAMF_3842 4a98bbd5b517fed9064592ceac24b0fa 371 SUPERFAMILY SSF48452 127 267 1.05E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_3842 4a98bbd5b517fed9064592ceac24b0fa 371 Gene3D G3DSA:1.25.40.10 1 364 3.8E-97 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_3842 4a98bbd5b517fed9064592ceac24b0fa 371 SMART SM00028 213 246 0.036 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_3842 4a98bbd5b517fed9064592ceac24b0fa 371 SMART SM00028 252 285 80.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_3842 4a98bbd5b517fed9064592ceac24b0fa 371 SMART SM00028 173 206 280.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_3842 4a98bbd5b517fed9064592ceac24b0fa 371 SMART SM00028 326 359 23.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_3842 4a98bbd5b517fed9064592ceac24b0fa 371 SMART SM00028 132 165 130.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_1084 e909ac8f35ee4ab19b25344206e44b38 960 Pfam PF13514 AAA domain 1 200 8.7E-26 T 12-10-2018 IPR038734 Uncharacterized protein YhaN, AAA domain BAMF_1084 e909ac8f35ee4ab19b25344206e44b38 960 SUPERFAMILY SSF52540 1 949 1.37E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1084 e909ac8f35ee4ab19b25344206e44b38 960 Gene3D G3DSA:3.40.50.300 710 957 1.5E-15 T 12-10-2018 BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 TIGRFAM TIGR00838 argH: argininosuccinate lyase 4 455 7.4E-217 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 8.6E-30 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 8.6E-30 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 8.6E-30 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 8.6E-30 T 12-10-2018 IPR000362 Fumarate lyase family BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 SUPERFAMILY SSF48557 4 453 3.46E-152 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 4.1E-69 T 12-10-2018 BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 4.1E-69 T 12-10-2018 BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 4.1E-69 T 12-10-2018 BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 4.1E-69 T 12-10-2018 BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 4.1E-69 T 12-10-2018 BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 4.1E-69 T 12-10-2018 BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 Gene3D G3DSA:1.10.275.10 26 230 1.3E-197 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 Pfam PF14698 Argininosuccinate lyase C-terminal 364 432 4.8E-24 T 12-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 Pfam PF00206 Lyase 7 301 3.5E-77 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 Gene3D G3DSA:1.20.200.10 120 448 1.3E-197 T 12-10-2018 BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 Gene3D G3DSA:1.10.40.30 361 433 1.3E-197 T 12-10-2018 BAMF_2736 1cb0382b81e9ca132189cbf50bb7a909 458 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 454 44.98 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BAMF_3441 6a9000d2e94d6f38b0d1e492025a9458 305 Pfam PF13407 Periplasmic binding protein domain 40 290 1.3E-63 T 12-10-2018 IPR025997 Periplasmic binding protein BAMF_3441 6a9000d2e94d6f38b0d1e492025a9458 305 Gene3D G3DSA:3.40.50.2300 44 290 2.0E-91 T 12-10-2018 BAMF_3441 6a9000d2e94d6f38b0d1e492025a9458 305 Gene3D G3DSA:3.40.50.2300 138 271 2.0E-91 T 12-10-2018 BAMF_3441 6a9000d2e94d6f38b0d1e492025a9458 305 SUPERFAMILY SSF53822 24 304 6.79E-87 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BAMF_3733 901404be3b6aec857779b2a3f762becf 277 SUPERFAMILY SSF63520 170 273 5.36E-31 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BAMF_3733 901404be3b6aec857779b2a3f762becf 277 Pfam PF00874 PRD domain 75 163 3.7E-25 T 12-10-2018 IPR011608 PRD domain GO:0006355 BAMF_3733 901404be3b6aec857779b2a3f762becf 277 Pfam PF00874 PRD domain 180 272 3.8E-21 T 12-10-2018 IPR011608 PRD domain GO:0006355 BAMF_3733 901404be3b6aec857779b2a3f762becf 277 Gene3D G3DSA:1.10.1790.10 168 277 4.4E-44 T 12-10-2018 BAMF_3733 901404be3b6aec857779b2a3f762becf 277 SUPERFAMILY SSF63520 57 166 9.55E-33 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BAMF_3733 901404be3b6aec857779b2a3f762becf 277 SUPERFAMILY SSF50151 2 54 4.32E-17 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BAMF_3733 901404be3b6aec857779b2a3f762becf 277 SMART SM01061 1 59 6.6E-28 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BAMF_3733 901404be3b6aec857779b2a3f762becf 277 Gene3D G3DSA:2.30.24.10 1 55 1.2E-23 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BAMF_3733 901404be3b6aec857779b2a3f762becf 277 ProSitePatterns PS00654 PRD domain signature. 98 110 - T 12-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 BAMF_3733 901404be3b6aec857779b2a3f762becf 277 Pfam PF03123 CAT RNA binding domain 2 56 4.9E-22 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BAMF_3733 901404be3b6aec857779b2a3f762becf 277 Gene3D G3DSA:1.10.1790.10 64 167 3.5E-42 T 12-10-2018 BAMF_2937 64a8821af747ac9583290162a8c44190 387 SUPERFAMILY SSF56796 1 385 1.13E-119 T 12-10-2018 BAMF_2937 64a8821af747ac9583290162a8c44190 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BAMF_2937 64a8821af747ac9583290162a8c44190 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BAMF_2937 64a8821af747ac9583290162a8c44190 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 368 7.1E-104 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BAMF_2937 64a8821af747ac9583290162a8c44190 387 Gene3D G3DSA:3.40.50.1970 1 184 9.8E-60 T 12-10-2018 BAMF_2937 64a8821af747ac9583290162a8c44190 387 Gene3D G3DSA:1.20.1090.10 185 386 1.0E-46 T 12-10-2018 BAMF_3165 a6e29c482e40cd27240c2290b91aece4 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 182 4.2E-18 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_3165 a6e29c482e40cd27240c2290b91aece4 192 Pfam PF04545 Sigma-70, region 4 131 180 2.9E-13 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BAMF_3165 a6e29c482e40cd27240c2290b91aece4 192 SUPERFAMILY SSF88659 119 184 8.78E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_3165 a6e29c482e40cd27240c2290b91aece4 192 Gene3D G3DSA:1.20.140.160 57 185 6.7E-15 T 12-10-2018 BAMF_3026 f6ec950b10d30ad89cd18ffa4b2d2173 489 Gene3D G3DSA:2.120.10.30 1 127 7.4E-21 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BAMF_3026 f6ec950b10d30ad89cd18ffa4b2d2173 489 Gene3D G3DSA:3.40.50.1820 233 489 2.3E-78 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_3026 f6ec950b10d30ad89cd18ffa4b2d2173 489 Pfam PF07676 WD40-like Beta Propeller Repeat 60 83 0.017 T 12-10-2018 IPR011659 WD40-like Beta Propeller BAMF_3026 f6ec950b10d30ad89cd18ffa4b2d2173 489 Pfam PF07676 WD40-like Beta Propeller Repeat 11 37 6.2E-5 T 12-10-2018 IPR011659 WD40-like Beta Propeller BAMF_3026 f6ec950b10d30ad89cd18ffa4b2d2173 489 SUPERFAMILY SSF53474 231 487 1.66E-71 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_3026 f6ec950b10d30ad89cd18ffa4b2d2173 489 Pfam PF00326 Prolyl oligopeptidase family 278 488 1.3E-54 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BAMF_3026 f6ec950b10d30ad89cd18ffa4b2d2173 489 SUPERFAMILY SSF82171 2 223 2.82E-30 T 12-10-2018 BAMF_2973 841e4098e778f5e6f7bdf34408a664b6 407 Pfam PF00563 EAL domain 46 195 2.5E-10 T 12-10-2018 IPR001633 EAL domain BAMF_2973 841e4098e778f5e6f7bdf34408a664b6 407 PIRSF PIRSF003180 1 406 6.4E-147 T 12-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing BAMF_2973 841e4098e778f5e6f7bdf34408a664b6 407 SUPERFAMILY SSF141868 3 198 3.4E-27 T 12-10-2018 IPR035919 EAL domain superfamily BAMF_2973 841e4098e778f5e6f7bdf34408a664b6 407 SMART SM00052 2 202 0.0034 T 12-10-2018 IPR001633 EAL domain BAMF_2973 841e4098e778f5e6f7bdf34408a664b6 407 SUPERFAMILY SSF109604 186 404 2.45E-43 T 12-10-2018 BAMF_2973 841e4098e778f5e6f7bdf34408a664b6 407 Gene3D G3DSA:1.10.3210.10 202 373 3.5E-27 T 12-10-2018 BAMF_2973 841e4098e778f5e6f7bdf34408a664b6 407 Gene3D G3DSA:3.20.20.450 34 201 4.7E-17 T 12-10-2018 IPR035919 EAL domain superfamily BAMF_2973 841e4098e778f5e6f7bdf34408a664b6 407 Pfam PF08668 HDOD domain 210 329 1.9E-19 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD BAMF_3906 c3c90a28f9dd955f1ccf66d502ec5ecb 95 Gene3D G3DSA:3.30.70.60 1 95 1.4E-35 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BAMF_3906 c3c90a28f9dd955f1ccf66d502ec5ecb 95 SUPERFAMILY SSF54995 1 95 9.16E-34 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3906 c3c90a28f9dd955f1ccf66d502ec5ecb 95 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 4.3E-36 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3906 c3c90a28f9dd955f1ccf66d502ec5ecb 95 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 23.544 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 BAMF_3906 c3c90a28f9dd955f1ccf66d502ec5ecb 95 ProSitePatterns PS01048 Ribosomal protein S6 signature. 44 53 - T 12-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 BAMF_3906 c3c90a28f9dd955f1ccf66d502ec5ecb 95 Pfam PF01250 Ribosomal protein S6 3 92 6.5E-29 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2808 ce1af62d1e46bde6cd2deb2db055186f 425 Gene3D G3DSA:3.40.190.10 46 354 2.3E-136 T 12-10-2018 BAMF_2808 ce1af62d1e46bde6cd2deb2db055186f 425 Pfam PF01547 Bacterial extracellular solute-binding protein 44 333 3.5E-36 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein BAMF_2808 ce1af62d1e46bde6cd2deb2db055186f 425 Gene3D G3DSA:3.40.190.10 139 395 2.3E-136 T 12-10-2018 BAMF_2808 ce1af62d1e46bde6cd2deb2db055186f 425 SUPERFAMILY SSF53850 18 413 4.35E-65 T 12-10-2018 BAMF_0673 06c8861f81ddbab5ce3ac62af9e688cc 156 TIGRFAM TIGR01741 staph_tand_hypo: conserved hypothetical protein 1 154 9.0E-51 T 12-10-2018 IPR006728 Protein of unknown function DUF600 BAMF_0673 06c8861f81ddbab5ce3ac62af9e688cc 156 Gene3D G3DSA:3.30.500.20 2 118 2.5E-39 T 12-10-2018 BAMF_0673 06c8861f81ddbab5ce3ac62af9e688cc 156 SUPERFAMILY SSF160424 4 153 6.02E-51 T 12-10-2018 IPR036170 Probable antitoxin YezG superfamily BAMF_0673 06c8861f81ddbab5ce3ac62af9e688cc 156 Pfam PF04634 Protein of unknown function, DUF600 7 150 7.2E-51 T 12-10-2018 IPR006728 Protein of unknown function DUF600 BAMF_0693 97598cee3adf7ec8965b8bb98a4aa979 373 Gene3D G3DSA:3.50.50.60 6 359 1.3E-76 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0693 97598cee3adf7ec8965b8bb98a4aa979 373 Pfam PF01494 FAD binding domain 8 340 1.7E-31 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 BAMF_0693 97598cee3adf7ec8965b8bb98a4aa979 373 SUPERFAMILY SSF51905 7 359 3.11E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0693 97598cee3adf7ec8965b8bb98a4aa979 373 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 5.0E-18 T 12-10-2018 BAMF_0693 97598cee3adf7ec8965b8bb98a4aa979 373 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 5.0E-18 T 12-10-2018 BAMF_0693 97598cee3adf7ec8965b8bb98a4aa979 373 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 5.0E-18 T 12-10-2018 BAMF_0693 97598cee3adf7ec8965b8bb98a4aa979 373 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 5.0E-18 T 12-10-2018 BAMF_3629 064ccbda13ae244367c4faca8a98fbf9 439 Pfam PF00860 Permease family 2 390 4.2E-84 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BAMF_3629 064ccbda13ae244367c4faca8a98fbf9 439 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 336 356 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BAMF_0204 0bc460b7e508d14081ce7a8777da9376 294 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 43 284 7.5E-61 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BAMF_0204 0bc460b7e508d14081ce7a8777da9376 294 SUPERFAMILY SSF51695 37 289 2.07E-77 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BAMF_0204 0bc460b7e508d14081ce7a8777da9376 294 Gene3D G3DSA:3.20.20.190 26 293 7.2E-115 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BAMF_2397 3c7a56cec8133cd4217af1d98e255556 309 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 29 307 1.2E-87 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 BAMF_2397 3c7a56cec8133cd4217af1d98e255556 309 Gene3D G3DSA:1.10.3720.10 84 308 3.9E-37 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2397 3c7a56cec8133cd4217af1d98e255556 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 308 1.4E-30 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_2397 3c7a56cec8133cd4217af1d98e255556 309 SUPERFAMILY SSF161098 57 300 3.53E-37 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_0353 1be925a9a7c23f90f0de9ddc014a1070 291 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.6E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_0353 1be925a9a7c23f90f0de9ddc014a1070 291 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.6E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_0353 1be925a9a7c23f90f0de9ddc014a1070 291 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 1.6E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_0353 1be925a9a7c23f90f0de9ddc014a1070 291 SUPERFAMILY SSF46689 3 64 3.41E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_0353 1be925a9a7c23f90f0de9ddc014a1070 291 Gene3D G3DSA:1.10.357.10 2 195 3.0E-23 T 12-10-2018 BAMF_3286 d59b567f53fe58838506740e10dddc22 379 Pfam PF13439 Glycosyltransferase Family 4 26 174 1.6E-16 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BAMF_3286 d59b567f53fe58838506740e10dddc22 379 SUPERFAMILY SSF53756 19 368 5.76E-78 T 12-10-2018 BAMF_3286 d59b567f53fe58838506740e10dddc22 379 Pfam PF00534 Glycosyl transferases group 1 185 350 4.4E-42 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 BAMF_3286 d59b567f53fe58838506740e10dddc22 379 Gene3D G3DSA:3.40.50.2000 171 355 2.1E-78 T 12-10-2018 BAMF_3286 d59b567f53fe58838506740e10dddc22 379 Gene3D G3DSA:3.40.50.2000 27 368 2.1E-78 T 12-10-2018 BAMF_1189 4a218ecc05dfeebce1b490fb719dbc7f 140 SUPERFAMILY SSF54593 3 130 1.88E-26 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_1189 4a218ecc05dfeebce1b490fb719dbc7f 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 117 1.7E-15 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BAMF_1189 4a218ecc05dfeebce1b490fb719dbc7f 140 Hamap MF_01512 Metallothiol transferase FosB [fosB]. 2 139 42.122 T 12-10-2018 IPR022858 Metallothiol transferase FosB GO:0016765|GO:0046677 BAMF_1189 4a218ecc05dfeebce1b490fb719dbc7f 140 Gene3D G3DSA:3.10.180.10 1 136 8.5E-40 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_0271 a282f521d8615eac8dd8d3c9299fbfa4 293 SUPERFAMILY SSF53850 31 188 2.33E-50 T 12-10-2018 BAMF_0271 a282f521d8615eac8dd8d3c9299fbfa4 293 SUPERFAMILY SSF53850 188 293 1.96E-28 T 12-10-2018 BAMF_0271 a282f521d8615eac8dd8d3c9299fbfa4 293 Gene3D G3DSA:3.40.190.230 34 291 2.1E-117 T 12-10-2018 BAMF_0271 a282f521d8615eac8dd8d3c9299fbfa4 293 Gene3D G3DSA:3.10.105.10 116 272 2.1E-117 T 12-10-2018 BAMF_0271 a282f521d8615eac8dd8d3c9299fbfa4 293 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 172 8.2E-41 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 BAMF_0271 a282f521d8615eac8dd8d3c9299fbfa4 293 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 190 293 3.1E-23 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 BAMF_2190 9cefa578013b64da47686d923408d09b 224 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 217 9.0E-91 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BAMF_2190 9cefa578013b64da47686d923408d09b 224 SUPERFAMILY SSF52540 6 220 4.21E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2190 9cefa578013b64da47686d923408d09b 224 Gene3D G3DSA:3.40.50.300 1 224 5.3E-88 T 12-10-2018 BAMF_2190 9cefa578013b64da47686d923408d09b 224 Pfam PF02224 Cytidylate kinase 7 220 3.5E-83 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BAMF_2190 9cefa578013b64da47686d923408d09b 224 Hamap MF_00238 Cytidylate kinase [cmk]. 5 223 34.085 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BAMF_0697 38b818a3eacf0e4d4ffdb5a2c6340764 254 Pfam PF00483 Nucleotidyl transferase 2 242 1.7E-19 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BAMF_0697 38b818a3eacf0e4d4ffdb5a2c6340764 254 Gene3D G3DSA:3.90.550.10 1 254 1.1E-67 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0697 38b818a3eacf0e4d4ffdb5a2c6340764 254 SUPERFAMILY SSF53448 1 254 1.95E-62 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0697 38b818a3eacf0e4d4ffdb5a2c6340764 254 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 254 5.7E-91 T 12-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 BAMF_3638 dce129725a956486ae58b6677b735073 276 SUPERFAMILY SSF63520 51 161 9.55E-32 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BAMF_3638 dce129725a956486ae58b6677b735073 276 Gene3D G3DSA:1.10.1790.10 62 163 1.3E-34 T 12-10-2018 BAMF_3638 dce129725a956486ae58b6677b735073 276 Pfam PF03123 CAT RNA binding domain 2 55 5.8E-20 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BAMF_3638 dce129725a956486ae58b6677b735073 276 SMART SM01061 1 59 2.8E-22 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BAMF_3638 dce129725a956486ae58b6677b735073 276 Gene3D G3DSA:1.20.890.100 164 218 5.4E-18 T 12-10-2018 BAMF_3638 dce129725a956486ae58b6677b735073 276 Gene3D G3DSA:2.30.24.10 1 55 7.2E-21 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BAMF_3638 dce129725a956486ae58b6677b735073 276 SUPERFAMILY SSF63520 169 272 4.71E-30 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BAMF_3638 dce129725a956486ae58b6677b735073 276 Gene3D G3DSA:1.20.58.1950 222 273 1.2E-12 T 12-10-2018 BAMF_3638 dce129725a956486ae58b6677b735073 276 Pfam PF00874 PRD domain 178 270 2.8E-23 T 12-10-2018 IPR011608 PRD domain GO:0006355 BAMF_3638 dce129725a956486ae58b6677b735073 276 Pfam PF00874 PRD domain 72 159 6.5E-26 T 12-10-2018 IPR011608 PRD domain GO:0006355 BAMF_3638 dce129725a956486ae58b6677b735073 276 SUPERFAMILY SSF50151 2 53 6.8E-16 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BAMF_3009 150e9f36c158405a4966b986ea26066e 326 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 165 177 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 BAMF_3009 150e9f36c158405a4966b986ea26066e 326 SUPERFAMILY SSF51412 4 315 2.49E-93 T 12-10-2018 BAMF_3009 150e9f36c158405a4966b986ea26066e 326 PIRSF PIRSF036500 1 326 2.5E-196 T 12-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 BAMF_3009 150e9f36c158405a4966b986ea26066e 326 SMART SM01240 3 326 1.5E-115 T 12-10-2018 BAMF_3009 150e9f36c158405a4966b986ea26066e 326 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 6 310 2.2E-70 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 BAMF_3009 150e9f36c158405a4966b986ea26066e 326 Gene3D G3DSA:3.20.20.70 1 326 2.3E-110 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_3009 150e9f36c158405a4966b986ea26066e 326 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 4 324 4.8E-201 T 12-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 BAMF_3009 150e9f36c158405a4966b986ea26066e 326 Hamap MF_01511 GMP reductase [guaC]. 2 325 64.867 T 12-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 BAMF_3463 abab8a2707b7c3b3ae691bb85c7cff90 633 Pfam PF15637 HNH/Endo VII superfamily nuclease toxin with a HHH motif 507 605 1.9E-15 T 12-10-2018 IPR028915 Tox-HNH-HHH domain BAMF_3463 abab8a2707b7c3b3ae691bb85c7cff90 633 Pfam PF04740 LXG domain of WXG superfamily 3 201 2.5E-47 T 12-10-2018 IPR006829 LXG domain BAMF_3463 abab8a2707b7c3b3ae691bb85c7cff90 633 Pfam PF14449 Pre-toxin TG 255 320 3.6E-20 T 12-10-2018 IPR027797 Pre-toxin TG domain BAMF_3029 fb1ab73b67d154902a131ad2cd536484 355 PIRSF PIRSF038945 1 350 3.8E-163 T 12-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 BAMF_3029 fb1ab73b67d154902a131ad2cd536484 355 TIGRFAM TIGR00260 thrC: threonine synthase 9 325 5.4E-113 T 12-10-2018 IPR004450 Threonine synthase-like BAMF_3029 fb1ab73b67d154902a131ad2cd536484 355 Gene3D G3DSA:3.40.50.1100 12 324 7.4E-124 T 12-10-2018 BAMF_3029 fb1ab73b67d154902a131ad2cd536484 355 Gene3D G3DSA:3.40.50.1100 61 157 7.4E-124 T 12-10-2018 BAMF_3029 fb1ab73b67d154902a131ad2cd536484 355 SUPERFAMILY SSF53686 4 348 1.07E-108 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BAMF_3029 fb1ab73b67d154902a131ad2cd536484 355 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BAMF_3029 fb1ab73b67d154902a131ad2cd536484 355 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 26 318 3.8E-77 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BAMF_3718 c2c37508c2802e9a5cb28f408735c261 278 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 8 210 6.6E-64 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BAMF_3718 c2c37508c2802e9a5cb28f408735c261 278 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 216 270 1.8E-21 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 BAMF_3718 c2c37508c2802e9a5cb28f408735c261 278 PIRSF PIRSF006483 1 278 1.2E-83 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BAMF_3718 c2c37508c2802e9a5cb28f408735c261 278 Gene3D G3DSA:3.30.70.120 188 263 2.7E-24 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BAMF_3611 5bc702777937b4ff36cdc005332ebe1b 560 SUPERFAMILY SSF53187 4 525 1.02E-27 T 12-10-2018 BAMF_3611 5bc702777937b4ff36cdc005332ebe1b 560 PIRSF PIRSF010386 3 556 2.2E-219 T 12-10-2018 IPR012166 Uncharacterised protein family RocB BAMF_3611 5bc702777937b4ff36cdc005332ebe1b 560 Pfam PF01546 Peptidase family M20/M25/M40 131 201 2.6E-8 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BAMF_3611 5bc702777937b4ff36cdc005332ebe1b 560 Gene3D G3DSA:3.40.630.10 10 234 1.4E-26 T 12-10-2018 BAMF_0614 bba9fb494c0b265f172b1d076014c1f1 643 SUPERFAMILY SSF52266 476 641 8.43E-18 T 12-10-2018 BAMF_0614 bba9fb494c0b265f172b1d076014c1f1 643 Pfam PF01757 Acyltransferase family 12 327 2.1E-23 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BAMF_0614 bba9fb494c0b265f172b1d076014c1f1 643 Gene3D G3DSA:3.40.50.1110 452 643 4.9E-14 T 12-10-2018 IPR036514 SGNH hydrolase superfamily BAMF_2157 a93b693a53d59f83847baeee49599fbc 167 Pfam PF08802 Cytochrome B6-F complex Fe-S subunit 6 35 7.0E-7 T 12-10-2018 IPR014909 Cytochrome b6-f complex Fe-S subunit GO:0009496|GO:0042651|GO:0051537|GO:0055114 KEGG: 00195+1.10.9.1|MetaCyc: PWY-101 BAMF_2157 a93b693a53d59f83847baeee49599fbc 167 Pfam PF00355 Rieske [2Fe-2S] domain 78 147 1.9E-11 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BAMF_2157 a93b693a53d59f83847baeee49599fbc 167 Gene3D G3DSA:2.102.10.10 44 164 6.2E-22 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BAMF_2157 a93b693a53d59f83847baeee49599fbc 167 SUPERFAMILY SSF50022 4 158 6.29E-30 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BAMF_2486 7b9f743578146f51618073e6a24892c2 320 Pfam PF13280 WYL domain 139 314 1.4E-29 T 12-10-2018 IPR026881 WYL domain BAMF_2486 7b9f743578146f51618073e6a24892c2 320 Gene3D G3DSA:1.10.10.10 3 63 3.6E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2486 7b9f743578146f51618073e6a24892c2 320 SUPERFAMILY SSF46785 4 60 1.0E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2486 7b9f743578146f51618073e6a24892c2 320 Pfam PF08279 HTH domain 8 60 8.6E-15 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BAMF_3175 88fc35cda42bb09f5ae8f3902c1ea5ca 46 Pfam PF09575 Small spore protein J (Spore_SspJ) 1 46 1.2E-24 T 12-10-2018 IPR014220 Small acid-soluble spore protein, SspJ BAMF_3175 88fc35cda42bb09f5ae8f3902c1ea5ca 46 TIGRFAM TIGR02863 spore_sspJ: small, acid-soluble spore protein, SspJ family 1 46 4.1E-26 T 12-10-2018 IPR014220 Small acid-soluble spore protein, SspJ BAMF_1506 82fc24894d8d17462323b62d6149f7ff 156 Gene3D G3DSA:3.90.1170.40 1 143 3.2E-54 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 BAMF_1506 82fc24894d8d17462323b62d6149f7ff 156 SUPERFAMILY SSF54690 4 136 4.05E-46 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 BAMF_1506 82fc24894d8d17462323b62d6149f7ff 156 Pfam PF02391 MoaE protein 6 117 1.7E-37 T 12-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 BAMF_3540 b1939ed887fbc693cf8947c7c04446d5 187 Gene3D G3DSA:1.10.1660.10 1 66 4.2E-23 T 12-10-2018 BAMF_3540 b1939ed887fbc693cf8947c7c04446d5 187 Pfam PF13411 MerR HTH family regulatory protein 2 62 5.5E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_3540 b1939ed887fbc693cf8947c7c04446d5 187 SUPERFAMILY SSF46955 1 118 5.55E-8 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BAMF_3540 b1939ed887fbc693cf8947c7c04446d5 187 Hamap MF_01170 Chromosome-anchoring protein RacA [racA]. 1 185 21.124 T 12-10-2018 IPR023522 Chromosome-anchoring protein RacA BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 Gene3D G3DSA:3.30.70.2570 490 564 6.9E-35 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 SMART SM00838 411 496 2.7E-4 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 Pfam PF03144 Elongation factor Tu domain 2 215 285 1.0E-12 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 Pfam PF00679 Elongation factor G C-terminus 409 496 2.5E-25 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 Gene3D G3DSA:3.30.70.3380 378 489 2.3E-44 T 12-10-2018 BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 SUPERFAMILY SSF54980 302 380 1.01E-18 T 12-10-2018 IPR035647 EF-G domain III/V-like BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 Gene3D G3DSA:3.40.50.300 10 195 1.6E-74 T 12-10-2018 BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 Pfam PF00009 Elongation factor Tu GTP binding domain 13 191 1.4E-53 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 Pfam PF06421 GTP-binding protein LepA C-terminus 498 604 2.7E-51 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 184 5.2E-20 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 PRINTS PR00315 GTP-binding elongation factor signature 59 67 3.9E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 PRINTS PR00315 GTP-binding elongation factor signature 16 29 3.9E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 PRINTS PR00315 GTP-binding elongation factor signature 84 94 3.9E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 PRINTS PR00315 GTP-binding elongation factor signature 136 145 3.9E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 PRINTS PR00315 GTP-binding elongation factor signature 100 111 3.9E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 Gene3D G3DSA:3.30.70.870 296 377 2.3E-36 T 12-10-2018 BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 SUPERFAMILY SSF50447 176 298 1.28E-32 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 SUPERFAMILY SSF54980 409 504 1.73E-26 T 12-10-2018 IPR035647 EF-G domain III/V-like BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 Gene3D G3DSA:2.40.30.10 196 295 1.7E-37 T 12-10-2018 BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 TIGRFAM TIGR01393 lepA: elongation factor 4 13 606 0.0 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 Hamap MF_00071 Elongation factor 4 [lepA]. 1 608 314.71 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site BAMF_2448 f059b7a6984171575dbd7783719aa2d7 611 SUPERFAMILY SSF52540 10 215 4.67E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1151 8d61489ffdb656fcf3ae2dbc2d48f385 1130 SUPERFAMILY SSF52540 18 1113 5.6E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1151 8d61489ffdb656fcf3ae2dbc2d48f385 1130 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1017 1085 1.7E-13 T 12-10-2018 BAMF_1151 8d61489ffdb656fcf3ae2dbc2d48f385 1130 Pfam PF13555 P-loop containing region of AAA domain 13 62 3.9E-7 T 12-10-2018 BAMF_1151 8d61489ffdb656fcf3ae2dbc2d48f385 1130 Gene3D G3DSA:3.40.50.300 1 276 3.4E-36 T 12-10-2018 BAMF_1151 8d61489ffdb656fcf3ae2dbc2d48f385 1130 Gene3D G3DSA:3.40.50.300 852 1126 2.6E-28 T 12-10-2018 BAMF_1511 539fea9c2b12068578c0bd0a8cf38bc0 397 Pfam PF02687 FtsX-like permease family 303 390 9.5E-13 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BAMF_1511 539fea9c2b12068578c0bd0a8cf38bc0 397 Pfam PF12704 MacB-like periplasmic core domain 21 238 5.9E-30 T 12-10-2018 IPR025857 MacB-like periplasmic core domain BAMF_3511 c02db652740235914d0c991c98aafe5b 229 SUPERFAMILY SSF53300 40 221 5.64E-26 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BAMF_3511 c02db652740235914d0c991c98aafe5b 229 Gene3D G3DSA:3.40.50.410 37 223 7.2E-31 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BAMF_3511 c02db652740235914d0c991c98aafe5b 229 SMART SM00327 36 228 6.0E-19 T 12-10-2018 IPR002035 von Willebrand factor, type A BAMF_3511 c02db652740235914d0c991c98aafe5b 229 Pfam PF00092 von Willebrand factor type A domain 40 220 5.0E-21 T 12-10-2018 IPR002035 von Willebrand factor, type A BAMF_2982 66378e52e1bb6c3f2abe9a00b3457510 157 ProDom PD090911 YUEC MEMBRANE TRANSMEMBRANE 24 153 1.0E-39 T 12-10-2018 IPR020212 ESX secretion system protein YueC BAMF_2982 66378e52e1bb6c3f2abe9a00b3457510 157 TIGRFAM TIGR03927 T7SS_EssA_Firm: type VII secretion protein EssA 6 150 2.4E-46 T 12-10-2018 IPR018920 ESAT-6 secretion machinery protein EssA/YueC BAMF_2982 66378e52e1bb6c3f2abe9a00b3457510 157 Pfam PF17355 Family of unknown function (DUF5383) 29 152 2.7E-36 T 12-10-2018 IPR020212 ESX secretion system protein YueC BAMF_1562 e68179c1a1bc2f2784f5255e138c1e84 305 Gene3D G3DSA:1.10.357.140 28 190 2.3E-18 T 12-10-2018 BAMF_1562 e68179c1a1bc2f2784f5255e138c1e84 305 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 21 304 18.305 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 BAMF_1562 e68179c1a1bc2f2784f5255e138c1e84 305 Pfam PF01040 UbiA prenyltransferase family 38 288 2.7E-57 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BAMF_1562 e68179c1a1bc2f2784f5255e138c1e84 305 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 23 301 1.7E-97 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 BAMF_1562 e68179c1a1bc2f2784f5255e138c1e84 305 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 81 103 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site BAMF_3617 1064daf5c28d0c074189cff41755f838 282 Gene3D G3DSA:3.40.50.720 4 265 2.1E-99 T 12-10-2018 BAMF_3617 1064daf5c28d0c074189cff41755f838 282 Gene3D G3DSA:3.90.25.10 160 271 2.1E-99 T 12-10-2018 BAMF_3617 1064daf5c28d0c074189cff41755f838 282 SUPERFAMILY SSF51735 3 277 1.12E-89 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3617 1064daf5c28d0c074189cff41755f838 282 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 276 6.5E-97 T 12-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 BAMF_3617 1064daf5c28d0c074189cff41755f838 282 Pfam PF04321 RmlD substrate binding domain 3 277 1.6E-98 T 12-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 BAMF_0164 79f16ea317229d67dd1da7a02606398e 250 Pfam PF00756 Putative esterase 16 241 6.7E-27 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 BAMF_0164 79f16ea317229d67dd1da7a02606398e 250 SUPERFAMILY SSF53474 15 244 2.9E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_0164 79f16ea317229d67dd1da7a02606398e 250 Gene3D G3DSA:3.40.50.1820 8 248 1.5E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1751 e5bf7767edd076ff99cbe930d78383ff 245 SUPERFAMILY SSF52096 29 228 4.07E-40 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_1751 e5bf7767edd076ff99cbe930d78383ff 245 Pfam PF00574 Clp protease 44 220 3.7E-35 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BAMF_1751 e5bf7767edd076ff99cbe930d78383ff 245 Gene3D G3DSA:3.90.226.10 36 222 3.1E-32 T 12-10-2018 BAMF_0280 90aa4d737c29bcb0ab884765319d40c6 229 Pfam PF13411 MerR HTH family regulatory protein 115 164 5.7E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_0280 90aa4d737c29bcb0ab884765319d40c6 229 Gene3D G3DSA:1.10.1660.10 113 173 1.8E-8 T 12-10-2018 BAMF_0895 db7f47da77ebd8eb6096aa646451e462 331 Gene3D G3DSA:3.40.1360.10 198 317 6.8E-14 T 12-10-2018 BAMF_0895 db7f47da77ebd8eb6096aa646451e462 331 Pfam PF13155 Toprim-like 216 300 4.4E-8 T 12-10-2018 BAMF_0895 db7f47da77ebd8eb6096aa646451e462 331 SMART SM00493 213 284 3.7E-4 T 12-10-2018 IPR006171 TOPRIM domain BAMF_0895 db7f47da77ebd8eb6096aa646451e462 331 SUPERFAMILY SSF56731 135 316 1.27E-10 T 12-10-2018 BAMF_1658 049ae74ee79fe7c39e2494062ebe17d2 300 Pfam PF03313 Serine dehydratase alpha chain 14 274 6.4E-78 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit BAMF_1658 049ae74ee79fe7c39e2494062ebe17d2 300 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 300 1.2E-164 T 12-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BAMF_0879 68b9750999bdb86219f67e79da762e3d 429 SUPERFAMILY SSF53383 3 425 7.23E-125 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_0879 68b9750999bdb86219f67e79da762e3d 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_0879 68b9750999bdb86219f67e79da762e3d 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 425 2.1E-171 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BAMF_0879 68b9750999bdb86219f67e79da762e3d 429 Pfam PF00202 Aminotransferase class-III 35 416 1.1E-70 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_0879 68b9750999bdb86219f67e79da762e3d 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 4 427 93.754 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BAMF_0879 68b9750999bdb86219f67e79da762e3d 429 Gene3D G3DSA:3.40.640.10 71 319 1.9E-171 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_0879 68b9750999bdb86219f67e79da762e3d 429 Gene3D G3DSA:3.90.1150.10 8 422 1.9E-171 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1853 dee3b2c6cc4eccece1650f5911c6284c 251 Gene3D G3DSA:3.40.630.30 2 171 1.6E-7 T 12-10-2018 BAMF_1853 dee3b2c6cc4eccece1650f5911c6284c 251 Pfam PF14268 YoaP-like 203 245 3.2E-19 T 12-10-2018 IPR025685 YoaP-like domain BAMF_1853 dee3b2c6cc4eccece1650f5911c6284c 251 SUPERFAMILY SSF55729 73 144 1.2E-8 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_1853 dee3b2c6cc4eccece1650f5911c6284c 251 SUPERFAMILY SSF52833 170 249 2.98E-5 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_3115 2170f0a803cc3d9ca13f917a7fed828c 341 Gene3D G3DSA:3.30.70.260 244 341 6.1E-30 T 12-10-2018 BAMF_3115 2170f0a803cc3d9ca13f917a7fed828c 341 Gene3D G3DSA:3.40.50.300 1 243 4.3E-77 T 12-10-2018 BAMF_3115 2170f0a803cc3d9ca13f917a7fed828c 341 SMART SM00382 30 218 1.9E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3115 2170f0a803cc3d9ca13f917a7fed828c 341 Pfam PF09383 NIL domain 266 337 6.4E-21 T 12-10-2018 IPR018449 NIL domain BAMF_3115 2170f0a803cc3d9ca13f917a7fed828c 341 SMART SM00930 263 338 3.9E-28 T 12-10-2018 IPR018449 NIL domain BAMF_3115 2170f0a803cc3d9ca13f917a7fed828c 341 SUPERFAMILY SSF52540 1 240 3.8E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3115 2170f0a803cc3d9ca13f917a7fed828c 341 Pfam PF00005 ABC transporter 22 169 2.8E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3115 2170f0a803cc3d9ca13f917a7fed828c 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3115 2170f0a803cc3d9ca13f917a7fed828c 341 SUPERFAMILY SSF55021 249 340 4.01E-23 T 12-10-2018 BAMF_1894 744c06bc7e844579f2d89b46d45046d6 193 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 192 1.5E-74 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BAMF_1894 744c06bc7e844579f2d89b46d45046d6 193 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 182 1.8E-52 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BAMF_1894 744c06bc7e844579f2d89b46d45046d6 193 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 191 20.529 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BAMF_1894 744c06bc7e844579f2d89b46d45046d6 193 SMART SM01207 8 183 1.3E-80 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BAMF_0773 b3aa88265fc7aa715bc93a7a2f66f00d 319 Gene3D G3DSA:3.30.460.20 3 125 4.7E-26 T 12-10-2018 BAMF_0773 b3aa88265fc7aa715bc93a7a2f66f00d 319 SUPERFAMILY SSF143865 24 249 1.96E-62 T 12-10-2018 BAMF_0773 b3aa88265fc7aa715bc93a7a2f66f00d 319 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 4 315 9.2E-116 T 12-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 BAMF_0773 b3aa88265fc7aa715bc93a7a2f66f00d 319 SUPERFAMILY SSF144083 250 312 3.66E-23 T 12-10-2018 BAMF_0773 b3aa88265fc7aa715bc93a7a2f66f00d 319 Gene3D G3DSA:1.20.58.340 239 315 1.1E-32 T 12-10-2018 BAMF_0773 b3aa88265fc7aa715bc93a7a2f66f00d 319 Gene3D G3DSA:1.20.58.340 126 237 1.7E-31 T 12-10-2018 BAMF_0773 b3aa88265fc7aa715bc93a7a2f66f00d 319 Pfam PF01544 CorA-like Mg2+ transporter protein 28 311 1.9E-78 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 Pfam PF00679 Elongation factor G C-terminus 598 684 1.9E-31 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 SUPERFAMILY SSF50447 263 402 3.03E-36 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 Gene3D G3DSA:3.30.70.240 602 672 1.8E-94 T 12-10-2018 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 Gene3D G3DSA:3.40.50.300 1 291 1.4E-113 T 12-10-2018 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 Pfam PF03764 Elongation factor G, domain IV 477 595 4.0E-46 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 Pfam PF14492 Elongation Factor G, domain II 402 475 9.7E-36 T 12-10-2018 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 SMART SM00838 598 685 8.2E-59 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 Pfam PF03144 Elongation factor Tu domain 2 322 389 5.1E-16 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 SUPERFAMILY SSF54980 598 688 2.93E-31 T 12-10-2018 IPR035647 EF-G domain III/V-like BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 SMART SM00889 478 596 7.6E-73 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 Gene3D G3DSA:2.40.30.10 292 403 8.5E-47 T 12-10-2018 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 Gene3D G3DSA:3.30.230.10 482 685 1.8E-94 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 Gene3D G3DSA:3.30.70.870 404 481 3.3E-32 T 12-10-2018 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 SUPERFAMILY SSF54980 400 478 2.95E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 SUPERFAMILY SSF52540 6 279 2.14E-110 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 Pfam PF00009 Elongation factor Tu GTP binding domain 9 279 3.0E-69 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 PRINTS PR00315 GTP-binding elongation factor signature 78 88 5.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 PRINTS PR00315 GTP-binding elongation factor signature 94 105 5.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 PRINTS PR00315 GTP-binding elongation factor signature 130 139 5.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 SUPERFAMILY SSF54211 477 597 3.03E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 181 2.0E-48 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BAMF_0112 c53a64bba256dff1ccf0c6a44d796433 692 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 114.12 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BAMF_3390 32b0f2c6870e6e489d3114c473f9d31f 229 SUPERFAMILY SSF52172 3 136 2.13E-34 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_3390 32b0f2c6870e6e489d3114c473f9d31f 229 SUPERFAMILY SSF46894 152 227 2.07E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_3390 32b0f2c6870e6e489d3114c473f9d31f 229 SMART SM00448 4 117 9.1E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3390 32b0f2c6870e6e489d3114c473f9d31f 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 196 1.0E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3390 32b0f2c6870e6e489d3114c473f9d31f 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 180 1.0E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3390 32b0f2c6870e6e489d3114c473f9d31f 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 208 1.0E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3390 32b0f2c6870e6e489d3114c473f9d31f 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 165 220 7.9E-25 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3390 32b0f2c6870e6e489d3114c473f9d31f 229 Pfam PF00072 Response regulator receiver domain 6 118 5.3E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3390 32b0f2c6870e6e489d3114c473f9d31f 229 Gene3D G3DSA:3.40.50.12740 4 226 4.3E-70 T 12-10-2018 BAMF_3390 32b0f2c6870e6e489d3114c473f9d31f 229 ProSitePatterns PS00622 LuxR-type HTH domain signature. 180 207 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_3390 32b0f2c6870e6e489d3114c473f9d31f 229 SMART SM00421 163 220 9.7E-29 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BAMF_2290 244dc79bbf9d4a8c2347b2ea89df26db 371 Gene3D G3DSA:3.40.630.10 14 362 6.9E-137 T 12-10-2018 BAMF_2290 244dc79bbf9d4a8c2347b2ea89df26db 371 Pfam PF01546 Peptidase family M20/M25/M40 73 367 3.1E-25 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BAMF_2290 244dc79bbf9d4a8c2347b2ea89df26db 371 Gene3D G3DSA:3.30.70.360 176 287 6.9E-137 T 12-10-2018 BAMF_2290 244dc79bbf9d4a8c2347b2ea89df26db 371 SUPERFAMILY SSF55031 179 283 1.44E-21 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BAMF_2290 244dc79bbf9d4a8c2347b2ea89df26db 371 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BAMF_2290 244dc79bbf9d4a8c2347b2ea89df26db 371 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 6 367 4.3E-182 T 12-10-2018 IPR010162 Peptidase M20B, peptidase T-like BAMF_2290 244dc79bbf9d4a8c2347b2ea89df26db 371 Pfam PF07687 Peptidase dimerisation domain 180 273 9.3E-15 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain BAMF_2290 244dc79bbf9d4a8c2347b2ea89df26db 371 PIRSF PIRSF001123 4 102 8.6E-5 T 12-10-2018 IPR008007 Peptidase M42 BAMF_2290 244dc79bbf9d4a8c2347b2ea89df26db 371 PIRSF PIRSF001123 262 371 3.1E-6 T 12-10-2018 IPR008007 Peptidase M42 BAMF_2290 244dc79bbf9d4a8c2347b2ea89df26db 371 PIRSF PIRSF001123 98 184 2.8E-4 T 12-10-2018 IPR008007 Peptidase M42 BAMF_2290 244dc79bbf9d4a8c2347b2ea89df26db 371 SUPERFAMILY SSF53187 5 370 3.27E-64 T 12-10-2018 BAMF_0498 efd0c4652837533680d00c8a89f7285d 367 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 1.7E-58 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BAMF_0498 efd0c4652837533680d00c8a89f7285d 367 PIRSF PIRSF000112 1 362 1.3E-109 T 12-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 BAMF_0498 efd0c4652837533680d00c8a89f7285d 367 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BAMF_0498 efd0c4652837533680d00c8a89f7285d 367 Gene3D G3DSA:1.20.1090.10 160 367 2.1E-78 T 12-10-2018 BAMF_0498 efd0c4652837533680d00c8a89f7285d 367 SUPERFAMILY SSF56796 3 358 1.07E-87 T 12-10-2018 BAMF_0498 efd0c4652837533680d00c8a89f7285d 367 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BAMF_0498 efd0c4652837533680d00c8a89f7285d 367 Gene3D G3DSA:3.40.50.1970 2 159 2.0E-40 T 12-10-2018 BAMF_1298 f0e23c9c4e49dd1bc49895f54e8943fe 227 SUPERFAMILY SSF56784 1 197 4.06E-38 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_1298 f0e23c9c4e49dd1bc49895f54e8943fe 227 Gene3D G3DSA:1.10.150.240 14 90 7.5E-41 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BAMF_1298 f0e23c9c4e49dd1bc49895f54e8943fe 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 68 186 8.2E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_1298 f0e23c9c4e49dd1bc49895f54e8943fe 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 185 8.3E-24 T 12-10-2018 BAMF_1298 f0e23c9c4e49dd1bc49895f54e8943fe 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 7.2E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_1298 f0e23c9c4e49dd1bc49895f54e8943fe 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 7.2E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_1298 f0e23c9c4e49dd1bc49895f54e8943fe 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 7.2E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_1298 f0e23c9c4e49dd1bc49895f54e8943fe 227 Gene3D G3DSA:3.40.50.1000 2 191 7.5E-41 T 12-10-2018 IPR023214 HAD superfamily BAMF_0758 901cc7092338d6cfb29461cdd04e005e 71 Hamap MF_00829 UPF0435 protein . 4 71 20.061 T 12-10-2018 IPR009507 Protein of unknown function UPF0435 BAMF_0758 901cc7092338d6cfb29461cdd04e005e 71 Pfam PF06569 Protein of unknown function (DUF1128) 3 71 6.8E-32 T 12-10-2018 IPR009507 Protein of unknown function UPF0435 BAMF_3915 d95c6289efb4b54ccd74a6f2b06419d0 283 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 29 283 1.7E-112 T 12-10-2018 IPR023705 Nucleoid occlusion protein BAMF_3915 d95c6289efb4b54ccd74a6f2b06419d0 283 Hamap MF_02015 Nucleoid occlusion protein [noc]. 3 283 39.222 T 12-10-2018 IPR023705 Nucleoid occlusion protein BAMF_3915 d95c6289efb4b54ccd74a6f2b06419d0 283 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 27 208 7.3E-66 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 BAMF_3915 d95c6289efb4b54ccd74a6f2b06419d0 283 SUPERFAMILY SSF110849 23 125 1.67E-28 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily BAMF_3915 d95c6289efb4b54ccd74a6f2b06419d0 283 SUPERFAMILY SSF109709 116 221 2.3E-33 T 12-10-2018 BAMF_3915 d95c6289efb4b54ccd74a6f2b06419d0 283 Gene3D G3DSA:1.10.10.2830 109 222 1.2E-35 T 12-10-2018 BAMF_3915 d95c6289efb4b54ccd74a6f2b06419d0 283 Pfam PF02195 ParB-like nuclease domain 32 121 4.6E-28 T 12-10-2018 IPR003115 ParB/Sulfiredoxin BAMF_3915 d95c6289efb4b54ccd74a6f2b06419d0 283 Gene3D G3DSA:3.90.1530.30 44 108 7.5E-25 T 12-10-2018 BAMF_3915 d95c6289efb4b54ccd74a6f2b06419d0 283 SMART SM00470 31 122 8.4E-36 T 12-10-2018 IPR003115 ParB/Sulfiredoxin BAMF_2817 e108cd04913cc31c82ba7527cfa88a82 394 SUPERFAMILY SSF103473 3 390 3.66E-53 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_2817 e108cd04913cc31c82ba7527cfa88a82 394 Gene3D G3DSA:1.20.1250.20 3 182 5.8E-23 T 12-10-2018 BAMF_2817 e108cd04913cc31c82ba7527cfa88a82 394 Gene3D G3DSA:1.20.1250.20 184 393 7.8E-22 T 12-10-2018 BAMF_2817 e108cd04913cc31c82ba7527cfa88a82 394 Pfam PF07690 Major Facilitator Superfamily 8 265 1.6E-21 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_3873 96e9c1f29c594815af245e11ac8a739c 659 Gene3D G3DSA:3.10.310.30 542 655 4.1E-8 T 12-10-2018 BAMF_3873 96e9c1f29c594815af245e11ac8a739c 659 Gene3D G3DSA:3.30.450.20 53 161 8.3E-35 T 12-10-2018 BAMF_3873 96e9c1f29c594815af245e11ac8a739c 659 SUPERFAMILY SSF64182 339 644 6.41E-68 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily BAMF_3873 96e9c1f29c594815af245e11ac8a739c 659 PIRSF PIRSF026583 1 659 8.4E-277 T 12-10-2018 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA BAMF_3873 96e9c1f29c594815af245e11ac8a739c 659 Pfam PF01368 DHH family 339 496 2.1E-21 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BAMF_3873 96e9c1f29c594815af245e11ac8a739c 659 SMART SM00267 132 299 1.0E-15 T 12-10-2018 IPR000160 GGDEF domain BAMF_3873 96e9c1f29c594815af245e11ac8a739c 659 Gene3D G3DSA:3.90.1640.10 322 541 5.5E-55 T 12-10-2018 BAMF_3873 96e9c1f29c594815af245e11ac8a739c 659 Pfam PF02272 DHHA1 domain 518 649 1.4E-13 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BAMF_0435 e07b45a8f419796e67a1081baa52cf98 511 SMART SM00490 272 353 3.2E-34 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_0435 e07b45a8f419796e67a1081baa52cf98 511 SUPERFAMILY SSF52540 88 375 8.26E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0435 e07b45a8f419796e67a1081baa52cf98 511 SMART SM00487 39 236 3.4E-65 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_0435 e07b45a8f419796e67a1081baa52cf98 511 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 167 175 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BAMF_0435 e07b45a8f419796e67a1081baa52cf98 511 Gene3D G3DSA:3.40.50.300 17 225 1.3E-75 T 12-10-2018 BAMF_0435 e07b45a8f419796e67a1081baa52cf98 511 Pfam PF00271 Helicase conserved C-terminal domain 245 353 2.8E-28 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_0435 e07b45a8f419796e67a1081baa52cf98 511 Gene3D G3DSA:3.40.50.300 228 457 1.5E-53 T 12-10-2018 BAMF_0435 e07b45a8f419796e67a1081baa52cf98 511 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 20 511 46.05 T 12-10-2018 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 BAMF_0435 e07b45a8f419796e67a1081baa52cf98 511 Pfam PF00270 DEAD/DEAH box helicase 44 209 5.5E-49 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BAMF_3270 13b0c2d0a389ede6df743aea43481235 396 SUPERFAMILY SSF53383 28 393 1.04E-80 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_3270 13b0c2d0a389ede6df743aea43481235 396 Pfam PF00155 Aminotransferase class I and II 90 386 3.2E-26 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_3270 13b0c2d0a389ede6df743aea43481235 396 Gene3D G3DSA:3.40.640.10 66 287 9.2E-112 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_3270 13b0c2d0a389ede6df743aea43481235 396 Gene3D G3DSA:3.90.1150.10 30 392 9.2E-112 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1572 85a26d8abbe0352b546b669f804c9828 79 Pfam PF14003 YlbE-like protein 13 72 1.9E-27 T 12-10-2018 IPR025613 YlbE-like protein BAMF_0731 1968103319fc589ea6862aa34c70a9fa 363 SUPERFAMILY SSF56512 3 362 1.1E-165 T 12-10-2018 IPR036119 Nitric oxide synthase, N-terminal domain superfamily GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 BAMF_0731 1968103319fc589ea6862aa34c70a9fa 363 Gene3D G3DSA:3.90.440.10 82 193 6.4E-149 T 12-10-2018 BAMF_0731 1968103319fc589ea6862aa34c70a9fa 363 PIRSF PIRSF037219 1 363 7.1E-189 T 12-10-2018 IPR017142 Nitric oxide synthase, oxygenase subunit GO:0004517|GO:0006809|GO:0020037 KEGG: 00220+1.14.14.47|KEGG: 00330+1.14.14.47 BAMF_0731 1968103319fc589ea6862aa34c70a9fa 363 Gene3D G3DSA:3.90.340.10 7 355 6.4E-149 T 12-10-2018 BAMF_0731 1968103319fc589ea6862aa34c70a9fa 363 Pfam PF02898 Nitric oxide synthase, oxygenase domain 5 362 6.9E-166 T 12-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 BAMF_0731 1968103319fc589ea6862aa34c70a9fa 363 ProSitePatterns PS60001 Nitric oxide synthase (NOS) signature. 65 72 - T 12-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 BAMF_0731 1968103319fc589ea6862aa34c70a9fa 363 Gene3D G3DSA:3.90.1230.10 194 300 6.4E-149 T 12-10-2018 BAMF_3424 4ab2e7a8b56d4ae14380fb9ae1e1ee00 285 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 250 1.7E-29 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BAMF_3424 4ab2e7a8b56d4ae14380fb9ae1e1ee00 285 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 12-10-2018 BAMF_3424 4ab2e7a8b56d4ae14380fb9ae1e1ee00 285 Gene3D G3DSA:3.30.1240.10 79 206 5.5E-83 T 12-10-2018 BAMF_3424 4ab2e7a8b56d4ae14380fb9ae1e1ee00 285 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 277 1.0E-63 T 12-10-2018 BAMF_3424 4ab2e7a8b56d4ae14380fb9ae1e1ee00 285 SUPERFAMILY SSF56784 2 281 9.19E-68 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_3424 4ab2e7a8b56d4ae14380fb9ae1e1ee00 285 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 3 277 7.4E-57 T 12-10-2018 IPR000150 Cof family GO:0016787 BAMF_3424 4ab2e7a8b56d4ae14380fb9ae1e1ee00 285 Gene3D G3DSA:3.40.50.1000 2 274 5.5E-83 T 12-10-2018 IPR023214 HAD superfamily BAMF_3358 b4a33250720f77285ecfd02f8eea2d1b 833 Gene3D G3DSA:3.50.30.10 702 830 1.7E-33 T 12-10-2018 BAMF_3358 b4a33250720f77285ecfd02f8eea2d1b 833 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 15 302 8.6E-79 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 BAMF_3358 b4a33250720f77285ecfd02f8eea2d1b 833 Gene3D G3DSA:3.30.470.20 164 312 2.1E-42 T 12-10-2018 BAMF_3358 b4a33250720f77285ecfd02f8eea2d1b 833 Pfam PF00391 PEP-utilising enzyme, mobile domain 753 823 5.3E-23 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BAMF_3358 b4a33250720f77285ecfd02f8eea2d1b 833 SUPERFAMILY SSF52009 723 826 5.36E-28 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BAMF_3358 b4a33250720f77285ecfd02f8eea2d1b 833 Gene3D G3DSA:3.30.1490.20 2 162 2.6E-41 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BAMF_3358 b4a33250720f77285ecfd02f8eea2d1b 833 SUPERFAMILY SSF56059 14 300 3.06E-74 T 12-10-2018 BAMF_3119 177431eaf24465ef168c8d0dce211f8f 78 Pfam PF10830 Protein of unknown function (DUF2553) 6 78 3.3E-30 T 12-10-2018 IPR020140 Uncharacterised protein family YusG BAMF_3119 177431eaf24465ef168c8d0dce211f8f 78 ProDom PD058325 YUSG BH3483 7 78 7.0E-29 T 12-10-2018 IPR020140 Uncharacterised protein family YusG BAMF_3315 d5ba23f90d311bf9bbec03c6425644f4 529 Pfam PF00916 Sulfate permease family 15 379 1.9E-100 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BAMF_3315 d5ba23f90d311bf9bbec03c6425644f4 529 Gene3D G3DSA:3.30.750.24 412 528 8.9E-24 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_3315 d5ba23f90d311bf9bbec03c6425644f4 529 Pfam PF01740 STAS domain 425 524 2.7E-20 T 12-10-2018 IPR002645 STAS domain BAMF_3315 d5ba23f90d311bf9bbec03c6425644f4 529 SUPERFAMILY SSF52091 426 522 2.16E-18 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_3315 d5ba23f90d311bf9bbec03c6425644f4 529 TIGRFAM TIGR00815 sulP: sulfate permease 8 523 2.3E-114 T 12-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 BAMF_3697 fd3a468e3e27a439caa5cde463692524 116 SMART SM00418 15 98 2.6E-33 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_3697 fd3a468e3e27a439caa5cde463692524 116 Gene3D G3DSA:1.10.10.10 1 100 3.0E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3697 fd3a468e3e27a439caa5cde463692524 116 SUPERFAMILY SSF46785 13 87 5.4E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3697 fd3a468e3e27a439caa5cde463692524 116 Pfam PF01022 Bacterial regulatory protein, arsR family 22 67 2.6E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_3697 fd3a468e3e27a439caa5cde463692524 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 4.8E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_3697 fd3a468e3e27a439caa5cde463692524 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 4.8E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_3697 fd3a468e3e27a439caa5cde463692524 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 4.8E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_3697 fd3a468e3e27a439caa5cde463692524 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 4.8E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_1378 29ec3259572e94245c10810a45fb5eb3 450 Gene3D G3DSA:2.40.10.10 226 343 3.8E-40 T 12-10-2018 BAMF_1378 29ec3259572e94245c10810a45fb5eb3 450 SUPERFAMILY SSF50156 327 441 2.5E-18 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BAMF_1378 29ec3259572e94245c10810a45fb5eb3 450 Gene3D G3DSA:2.40.10.10 98 224 2.3E-27 T 12-10-2018 BAMF_1378 29ec3259572e94245c10810a45fb5eb3 450 SMART SM00228 343 433 3.0E-11 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_1378 29ec3259572e94245c10810a45fb5eb3 450 Pfam PF13365 Trypsin-like peptidase domain 161 305 8.2E-30 T 12-10-2018 BAMF_1378 29ec3259572e94245c10810a45fb5eb3 450 PRINTS PR00834 HtrA/DegQ protease family signature 173 185 3.8E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_1378 29ec3259572e94245c10810a45fb5eb3 450 PRINTS PR00834 HtrA/DegQ protease family signature 276 293 3.8E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_1378 29ec3259572e94245c10810a45fb5eb3 450 PRINTS PR00834 HtrA/DegQ protease family signature 235 259 3.8E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_1378 29ec3259572e94245c10810a45fb5eb3 450 PRINTS PR00834 HtrA/DegQ protease family signature 298 315 3.8E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_1378 29ec3259572e94245c10810a45fb5eb3 450 PRINTS PR00834 HtrA/DegQ protease family signature 390 402 3.8E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_1378 29ec3259572e94245c10810a45fb5eb3 450 PRINTS PR00834 HtrA/DegQ protease family signature 194 214 3.8E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BAMF_1378 29ec3259572e94245c10810a45fb5eb3 450 Pfam PF13180 PDZ domain 343 442 1.1E-17 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_1378 29ec3259572e94245c10810a45fb5eb3 450 SUPERFAMILY SSF50494 109 340 1.84E-55 T 12-10-2018 IPR009003 Peptidase S1, PA clan BAMF_1378 29ec3259572e94245c10810a45fb5eb3 450 Gene3D G3DSA:2.30.42.10 344 448 1.1E-23 T 12-10-2018 BAMF_1393 fc81929603df222918b50404503cd9f7 163 SUPERFAMILY SSF103481 57 150 1.96E-14 T 12-10-2018 BAMF_1393 fc81929603df222918b50404503cd9f7 163 Gene3D G3DSA:1.10.3730.20 52 156 1.5E-23 T 12-10-2018 BAMF_1393 fc81929603df222918b50404503cd9f7 163 Pfam PF00893 Small Multidrug Resistance protein 52 140 2.5E-24 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BAMF_1486 d4c0538a25589df1f3d6bee8717d04e3 79 Pfam PF08796 Protein of unknown function (DUF1797) 7 78 2.2E-25 T 12-10-2018 IPR014904 Protein of unknown function DUF1797 BAMF_1486 d4c0538a25589df1f3d6bee8717d04e3 79 PIRSF PIRSF037356 1 79 6.2E-35 T 12-10-2018 IPR014904 Protein of unknown function DUF1797 BAMF_1486 d4c0538a25589df1f3d6bee8717d04e3 79 SUPERFAMILY SSF143567 2 79 2.35E-28 T 12-10-2018 IPR038073 YkuJ-like superfamily BAMF_1486 d4c0538a25589df1f3d6bee8717d04e3 79 Gene3D G3DSA:3.30.720.20 1 79 5.5E-37 T 12-10-2018 IPR038073 YkuJ-like superfamily BAMF_3804 2662c849c9e0454867e43dcde761c3d8 184 Gene3D G3DSA:3.10.180.10 1 182 1.8E-47 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_3804 2662c849c9e0454867e43dcde761c3d8 184 SUPERFAMILY SSF54593 12 71 9.05E-7 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_3920 8aec11d63aec64fc90bb846223f8f395 259 PRINTS PR00701 60kDa inner membrane protein signature 124 147 1.6E-15 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BAMF_3920 8aec11d63aec64fc90bb846223f8f395 259 PRINTS PR00701 60kDa inner membrane protein signature 208 231 1.6E-15 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BAMF_3920 8aec11d63aec64fc90bb846223f8f395 259 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 58 241 1.7E-68 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3920 8aec11d63aec64fc90bb846223f8f395 259 Pfam PF02096 60Kd inner membrane protein 59 241 5.7E-62 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BAMF_3920 8aec11d63aec64fc90bb846223f8f395 259 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 246 32.635 T 12-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 BAMF_3920 8aec11d63aec64fc90bb846223f8f395 259 PRINTS PR01900 YidC translocation/secretion protein signature 197 221 8.5E-6 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BAMF_3920 8aec11d63aec64fc90bb846223f8f395 259 PRINTS PR01900 YidC translocation/secretion protein signature 175 190 8.5E-6 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BAMF_2749 59966e27953f25f85e7d37bbff48189b 73 Gene3D G3DSA:1.10.8.910 11 72 6.8E-31 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily BAMF_2749 59966e27953f25f85e7d37bbff48189b 73 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 26 35 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 BAMF_2749 59966e27953f25f85e7d37bbff48189b 73 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 11 65 6.9E-22 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 BAMF_2749 59966e27953f25f85e7d37bbff48189b 73 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 44 58 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 BAMF_3757 aadfc0441c8f98a564974ef3fd7c4692 148 SUPERFAMILY SSF111064 7 148 1.12E-61 T 12-10-2018 IPR036482 Hut operon regulatory protein HutP superfamily BAMF_3757 aadfc0441c8f98a564974ef3fd7c4692 148 Pfam PF09021 HutP 9 146 2.9E-36 T 12-10-2018 IPR015111 Hut operon regulatory protein HutP BAMF_3757 aadfc0441c8f98a564974ef3fd7c4692 148 Hamap MF_00779 Hut operon positive regulatory protein [hutP]. 1 148 45.273 T 12-10-2018 IPR023552 Hut operon regulatory protein HutP, bacillales BAMF_3757 aadfc0441c8f98a564974ef3fd7c4692 148 Gene3D G3DSA:3.40.1510.10 2 148 8.5E-68 T 12-10-2018 IPR036482 Hut operon regulatory protein HutP superfamily BAMF_3076 8abc026c2d35a093eb1dcc63036daa74 278 Pfam PF05709 Phage tail protein 30 277 9.0E-39 T 12-10-2018 IPR008841 Siphovirus-type tail component BAMF_0850 3db56c64781245d89cb151d715465ed5 109 Gene3D G3DSA:2.40.10.270 5 109 8.7E-8 T 12-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily BAMF_0850 3db56c64781245d89cb151d715465ed5 109 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 8 92 9.3E-7 T 12-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor BAMF_0850 3db56c64781245d89cb151d715465ed5 109 Pfam PF05521 Phage head-tail joining protein 10 105 5.4E-13 T 12-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor BAMF_3382 290d19865b3bc2994d5a329f7d1f7ed8 505 PRINTS PR01005 Flagellar hook-associated protein signature 134 154 2.7E-10 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BAMF_3382 290d19865b3bc2994d5a329f7d1f7ed8 505 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 2.7E-10 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BAMF_3382 290d19865b3bc2994d5a329f7d1f7ed8 505 PRINTS PR01005 Flagellar hook-associated protein signature 167 191 2.7E-10 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BAMF_3382 290d19865b3bc2994d5a329f7d1f7ed8 505 PRINTS PR01005 Flagellar hook-associated protein signature 225 243 2.7E-10 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BAMF_3382 290d19865b3bc2994d5a329f7d1f7ed8 505 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 437 498 8.1E-14 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BAMF_3382 290d19865b3bc2994d5a329f7d1f7ed8 505 Pfam PF00460 Flagella basal body rod protein 8 38 4.5E-11 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BAMF_3382 290d19865b3bc2994d5a329f7d1f7ed8 505 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 7 498 3.9E-120 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BAMF_3382 290d19865b3bc2994d5a329f7d1f7ed8 505 SUPERFAMILY SSF64518 154 498 1.02E-23 T 12-10-2018 BAMF_3382 290d19865b3bc2994d5a329f7d1f7ed8 505 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BAMF_3007 1aa2296992c8d4de9dd10fbfa1edffd9 331 SUPERFAMILY SSF51905 8 314 6.88E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_3007 1aa2296992c8d4de9dd10fbfa1edffd9 331 Gene3D G3DSA:3.50.50.60 128 246 1.8E-122 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_3007 1aa2296992c8d4de9dd10fbfa1edffd9 331 Hamap MF_01685 Ferredoxin--NADP reductase. 7 328 44.641 T 12-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 BAMF_3007 1aa2296992c8d4de9dd10fbfa1edffd9 331 Gene3D G3DSA:3.50.50.60 7 304 1.8E-122 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_3007 1aa2296992c8d4de9dd10fbfa1edffd9 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 2.4E-26 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3007 1aa2296992c8d4de9dd10fbfa1edffd9 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 293 2.4E-26 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3007 1aa2296992c8d4de9dd10fbfa1edffd9 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 2.4E-26 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3007 1aa2296992c8d4de9dd10fbfa1edffd9 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 2.4E-26 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3007 1aa2296992c8d4de9dd10fbfa1edffd9 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 203 219 2.4E-26 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3007 1aa2296992c8d4de9dd10fbfa1edffd9 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 2.4E-26 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_3007 1aa2296992c8d4de9dd10fbfa1edffd9 331 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 293 1.2E-28 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BAMF_3007 1aa2296992c8d4de9dd10fbfa1edffd9 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 3.4E-16 T 12-10-2018 BAMF_3007 1aa2296992c8d4de9dd10fbfa1edffd9 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 3.4E-16 T 12-10-2018 BAMF_3007 1aa2296992c8d4de9dd10fbfa1edffd9 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 3.4E-16 T 12-10-2018 BAMF_1831 407d62924847a88d47bc7bd72f2fccf7 850 Pfam PF00391 PEP-utilising enzyme, mobile domain 774 845 2.1E-22 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BAMF_1831 407d62924847a88d47bc7bd72f2fccf7 850 Gene3D G3DSA:3.30.470.20 169 298 4.5E-44 T 12-10-2018 BAMF_1831 407d62924847a88d47bc7bd72f2fccf7 850 SUPERFAMILY SSF56059 2 326 1.29E-92 T 12-10-2018 BAMF_1831 407d62924847a88d47bc7bd72f2fccf7 850 Gene3D G3DSA:3.50.30.10 748 850 1.1E-31 T 12-10-2018 BAMF_1831 407d62924847a88d47bc7bd72f2fccf7 850 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 2 300 5.7E-93 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 BAMF_1831 407d62924847a88d47bc7bd72f2fccf7 850 SUPERFAMILY SSF52009 743 848 7.46E-28 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BAMF_1831 407d62924847a88d47bc7bd72f2fccf7 850 Gene3D G3DSA:3.30.1490.20 1 168 2.9E-65 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BAMF_2196 78749dc355d9225831e27a50ade0121d 327 Gene3D G3DSA:3.50.50.60 132 250 6.1E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_2196 78749dc355d9225831e27a50ade0121d 327 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 291 1.2E-101 T 12-10-2018 BAMF_2196 78749dc355d9225831e27a50ade0121d 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 3.0E-17 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_2196 78749dc355d9225831e27a50ade0121d 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 120 128 3.0E-17 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_2196 78749dc355d9225831e27a50ade0121d 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 282 300 3.0E-17 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_2196 78749dc355d9225831e27a50ade0121d 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 155 179 3.0E-17 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_2196 78749dc355d9225831e27a50ade0121d 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 8.1E-13 T 12-10-2018 BAMF_2196 78749dc355d9225831e27a50ade0121d 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 8.1E-13 T 12-10-2018 BAMF_2196 78749dc355d9225831e27a50ade0121d 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 8.1E-13 T 12-10-2018 BAMF_2196 78749dc355d9225831e27a50ade0121d 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 8.1E-13 T 12-10-2018 BAMF_2196 78749dc355d9225831e27a50ade0121d 327 TIGRFAM TIGR04018 Bthiol_YpdA: putative bacillithiol system oxidoreductase, YpdA family 6 320 8.6E-138 T 12-10-2018 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA BAMF_2196 78749dc355d9225831e27a50ade0121d 327 Gene3D G3DSA:3.50.50.60 7 295 6.1E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_2196 78749dc355d9225831e27a50ade0121d 327 SUPERFAMILY SSF51905 5 322 1.3E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0398 f560f02284b84eb8659548ddc7d7dbad 706 Pfam PF03170 Bacterial cellulose synthase subunit 48 593 5.6E-38 T 12-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 BAMF_0398 f560f02284b84eb8659548ddc7d7dbad 706 Gene3D G3DSA:2.60.120.260 36 165 1.6E-14 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily BAMF_0398 f560f02284b84eb8659548ddc7d7dbad 706 Gene3D G3DSA:2.60.120.260 326 475 5.6E-13 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily BAMF_1331 8f73fbef40e5b599f930e7c43aaab808 200 Pfam PF05908 Poly-gamma-glutamate hydrolase 5 193 3.8E-62 T 12-10-2018 IPR008585 Poly-gamma-glutamate hydrolase BAMF_1331 8f73fbef40e5b599f930e7c43aaab808 200 Gene3D G3DSA:3.40.630.100 1 200 6.2E-58 T 12-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily BAMF_1485 261a1fb4dd901d73b39d5c910f43d3aa 406 Gene3D G3DSA:3.20.20.450 1 229 5.0E-75 T 12-10-2018 IPR035919 EAL domain superfamily BAMF_1485 261a1fb4dd901d73b39d5c910f43d3aa 406 SUPERFAMILY SSF103190 263 403 2.67E-45 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BAMF_1485 261a1fb4dd901d73b39d5c910f43d3aa 406 Pfam PF00563 EAL domain 13 236 5.4E-33 T 12-10-2018 IPR001633 EAL domain BAMF_1485 261a1fb4dd901d73b39d5c910f43d3aa 406 Pfam PF10388 EAL-domain associated signalling protein domain 240 406 3.3E-77 T 12-10-2018 IPR018842 YkuI, C-terminal BAMF_1485 261a1fb4dd901d73b39d5c910f43d3aa 406 Gene3D G3DSA:3.30.450.20 291 406 7.5E-48 T 12-10-2018 BAMF_1485 261a1fb4dd901d73b39d5c910f43d3aa 406 SUPERFAMILY SSF141868 6 254 4.18E-45 T 12-10-2018 IPR035919 EAL domain superfamily BAMF_1485 261a1fb4dd901d73b39d5c910f43d3aa 406 SMART SM00052 1 241 4.1E-50 T 12-10-2018 IPR001633 EAL domain BAMF_1485 261a1fb4dd901d73b39d5c910f43d3aa 406 Gene3D G3DSA:1.20.5.170 246 290 1.1E-20 T 12-10-2018 BAMF_0539 a64b42ba631c2465f6bb3e079f59385c 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 27.006 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BAMF_0539 a64b42ba631c2465f6bb3e079f59385c 94 SUPERFAMILY SSF50129 2 93 8.01E-35 T 12-10-2018 IPR011032 GroES-like superfamily BAMF_0539 a64b42ba631c2465f6bb3e079f59385c 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 3.3E-36 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BAMF_0539 a64b42ba631c2465f6bb3e079f59385c 94 SMART SM00883 1 93 8.2E-56 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BAMF_0539 a64b42ba631c2465f6bb3e079f59385c 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 BAMF_0539 a64b42ba631c2465f6bb3e079f59385c 94 PRINTS PR00297 10kDa chaperonin signature 59 71 3.5E-33 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BAMF_0539 a64b42ba631c2465f6bb3e079f59385c 94 PRINTS PR00297 10kDa chaperonin signature 80 93 3.5E-33 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BAMF_0539 a64b42ba631c2465f6bb3e079f59385c 94 PRINTS PR00297 10kDa chaperonin signature 2 17 3.5E-33 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BAMF_0539 a64b42ba631c2465f6bb3e079f59385c 94 PRINTS PR00297 10kDa chaperonin signature 24 45 3.5E-33 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BAMF_0539 a64b42ba631c2465f6bb3e079f59385c 94 Gene3D G3DSA:2.30.33.40 1 93 2.0E-38 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 BAMF_2730 aca2c42e63bee555812feaa4f4e04618 313 SUPERFAMILY SSF64182 12 296 6.93E-74 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily BAMF_2730 aca2c42e63bee555812feaa4f4e04618 313 Pfam PF02272 DHHA1 domain 181 308 4.5E-15 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BAMF_2730 aca2c42e63bee555812feaa4f4e04618 313 Pfam PF01368 DHH family 15 153 1.2E-12 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BAMF_2730 aca2c42e63bee555812feaa4f4e04618 313 Gene3D G3DSA:3.10.310.30 199 313 5.1E-35 T 12-10-2018 BAMF_2730 aca2c42e63bee555812feaa4f4e04618 313 Gene3D G3DSA:3.90.1640.10 1 197 3.9E-60 T 12-10-2018 BAMF_0894 fa971a37eceb59cecaf55828fdf1819d 464 Gene3D G3DSA:3.40.50.300 157 455 7.9E-34 T 12-10-2018 BAMF_0894 fa971a37eceb59cecaf55828fdf1819d 464 SUPERFAMILY SSF52540 179 441 8.76E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0894 fa971a37eceb59cecaf55828fdf1819d 464 Pfam PF03796 DnaB-like helicase C terminal domain 179 437 9.8E-12 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 BAMF_0970 ef041042b9c4aa9501dc63029c67c001 451 Gene3D G3DSA:3.30.465.50 91 443 7.2E-95 T 12-10-2018 BAMF_0970 ef041042b9c4aa9501dc63029c67c001 451 Gene3D G3DSA:3.30.43.10 8 86 7.6E-24 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 BAMF_0970 ef041042b9c4aa9501dc63029c67c001 451 Pfam PF08031 Berberine and berberine like 400 443 2.2E-21 T 12-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 BAMF_0970 ef041042b9c4aa9501dc63029c67c001 451 Pfam PF01565 FAD binding domain 33 162 1.8E-29 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BAMF_0970 ef041042b9c4aa9501dc63029c67c001 451 SUPERFAMILY SSF56176 6 204 7.01E-49 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BAMF_0970 ef041042b9c4aa9501dc63029c67c001 451 Gene3D G3DSA:3.40.462.20 206 395 7.2E-95 T 12-10-2018 BAMF_1121 6db42387d3323c67f5d5be7167460f2b 191 SMART SM00855 3 146 7.4E-23 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BAMF_1121 6db42387d3323c67f5d5be7167460f2b 191 Gene3D G3DSA:3.40.50.1240 1 191 1.7E-52 T 12-10-2018 IPR029033 Histidine phosphatase superfamily BAMF_1121 6db42387d3323c67f5d5be7167460f2b 191 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 183 1.2E-50 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BAMF_1121 6db42387d3323c67f5d5be7167460f2b 191 SUPERFAMILY SSF53254 1 189 4.02E-54 T 12-10-2018 IPR029033 Histidine phosphatase superfamily BAMF_1121 6db42387d3323c67f5d5be7167460f2b 191 PIRSF PIRSF000709 2 187 1.6E-8 T 12-10-2018 BAMF_1121 6db42387d3323c67f5d5be7167460f2b 191 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 BAMF_2374 78d2ad2fb5990b06f2667902257cd1c7 345 Pfam PF00482 Type II secretion system (T2SS), protein F 16 136 1.9E-12 T 12-10-2018 IPR018076 Type II secretion system F domain BAMF_2374 78d2ad2fb5990b06f2667902257cd1c7 345 Pfam PF00482 Type II secretion system (T2SS), protein F 215 337 1.5E-21 T 12-10-2018 IPR018076 Type II secretion system F domain BAMF_2374 78d2ad2fb5990b06f2667902257cd1c7 345 PRINTS PR00812 Bacterial general secretion pathway protein F signature 38 50 7.9E-5 T 12-10-2018 IPR003004 GspF/PilC family BAMF_2374 78d2ad2fb5990b06f2667902257cd1c7 345 PRINTS PR00812 Bacterial general secretion pathway protein F signature 310 324 7.9E-5 T 12-10-2018 IPR003004 GspF/PilC family BAMF_2374 78d2ad2fb5990b06f2667902257cd1c7 345 PRINTS PR00812 Bacterial general secretion pathway protein F signature 326 345 7.9E-5 T 12-10-2018 IPR003004 GspF/PilC family BAMF_2374 78d2ad2fb5990b06f2667902257cd1c7 345 Gene3D G3DSA:1.20.81.30 198 309 9.1E-15 T 12-10-2018 BAMF_2374 78d2ad2fb5990b06f2667902257cd1c7 345 Gene3D G3DSA:1.20.81.30 2 111 4.1E-12 T 12-10-2018 BAMF_1826 941cecdc10ae5281eaafc0bedb64ebba 612 Gene3D G3DSA:3.40.50.720 93 349 6.5E-72 T 12-10-2018 BAMF_1826 941cecdc10ae5281eaafc0bedb64ebba 612 Pfam PF00899 ThiF family 107 342 9.7E-48 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BAMF_1826 941cecdc10ae5281eaafc0bedb64ebba 612 Gene3D G3DSA:3.40.50.150 385 611 2.4E-43 T 12-10-2018 BAMF_1826 941cecdc10ae5281eaafc0bedb64ebba 612 Pfam PF13847 Methyltransferase domain 395 500 5.6E-16 T 12-10-2018 IPR025714 Methyltransferase domain BAMF_1826 941cecdc10ae5281eaafc0bedb64ebba 612 SUPERFAMILY SSF69572 85 402 7.72E-60 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BAMF_1826 941cecdc10ae5281eaafc0bedb64ebba 612 SUPERFAMILY SSF53335 369 590 1.81E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_3529 59dd7abbd86744d31a6517b20df47d35 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 147 4.8E-63 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BAMF_3529 59dd7abbd86744d31a6517b20df47d35 149 SUPERFAMILY SSF89623 1 145 1.7E-57 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BAMF_3529 59dd7abbd86744d31a6517b20df47d35 149 Pfam PF02502 Ribose/Galactose Isomerase 3 141 1.7E-55 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BAMF_3529 59dd7abbd86744d31a6517b20df47d35 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 143 5.9E-51 T 12-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 BAMF_3529 59dd7abbd86744d31a6517b20df47d35 149 PIRSF PIRSF005384 1 148 9.3E-58 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BAMF_3529 59dd7abbd86744d31a6517b20df47d35 149 Gene3D G3DSA:3.40.1400.10 1 148 1.1E-59 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BAMF_0305 d3d8ea1ee8d6f604edb724b23aae088e 107 ProDom PD673109 PRECURSOR SIGNAL YCKD ORF4 DOMAIN 1 106 7.0E-44 T 12-10-2018 IPR024485 Protein of unknown function DUF2680 BAMF_0305 d3d8ea1ee8d6f604edb724b23aae088e 107 Pfam PF10925 Protein of unknown function (DUF2680) 35 91 3.2E-25 T 12-10-2018 IPR024485 Protein of unknown function DUF2680 BAMF_1358 62635047e468f62adc6f0ac2594b3928 88 ProDom PD028957 PBSX RELATED XKDR ELEMENT LIN1285 PHAGE PHAGE-LIKE YQBR 3 88 2.0E-28 T 12-10-2018 IPR022555 Protein of unknown function, DUF2577 BAMF_1358 62635047e468f62adc6f0ac2594b3928 88 Pfam PF10844 Protein of unknown function (DUF2577) 7 58 3.1E-6 T 12-10-2018 IPR022555 Protein of unknown function, DUF2577 BAMF_1214 539b7e263bc073455974a6b5b5224a4b 250 Hamap MF_01860 UPF0736 protein . 1 250 50.658 T 12-10-2018 IPR020909 UPF0736 BAMF_1214 539b7e263bc073455974a6b5b5224a4b 250 Pfam PF12227 Protein of unknown function (DUF3603) 35 250 8.1E-110 T 12-10-2018 IPR020909 UPF0736 BAMF_0209 c9937201c011d5755fc2ff46347cec25 166 SUPERFAMILY SSF47413 16 73 4.83E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_0209 c9937201c011d5755fc2ff46347cec25 166 Gene3D G3DSA:1.10.260.40 16 96 1.1E-8 T 12-10-2018 BAMF_0209 c9937201c011d5755fc2ff46347cec25 166 SMART SM00530 23 78 2.5E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_0209 c9937201c011d5755fc2ff46347cec25 166 Pfam PF01381 Helix-turn-helix 24 57 7.8E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_0146 5a8fa33a0026932269ca5796961cf99c 289 Pfam PF00005 ABC transporter 25 174 1.4E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0146 5a8fa33a0026932269ca5796961cf99c 289 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 280 2.3E-120 T 12-10-2018 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 BAMF_0146 5a8fa33a0026932269ca5796961cf99c 289 Gene3D G3DSA:3.40.50.300 1 289 1.9E-77 T 12-10-2018 BAMF_0146 5a8fa33a0026932269ca5796961cf99c 289 SMART SM00382 32 223 1.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0146 5a8fa33a0026932269ca5796961cf99c 289 SUPERFAMILY SSF52540 3 237 8.42E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0146 5a8fa33a0026932269ca5796961cf99c 289 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_1307 c43687894f912859c4be0c3db39841e5 285 Gene3D G3DSA:3.40.50.10090 51 187 2.2E-78 T 12-10-2018 BAMF_1307 c43687894f912859c4be0c3db39841e5 285 SUPERFAMILY SSF69618 20 280 2.88E-54 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_1307 c43687894f912859c4be0c3db39841e5 285 Pfam PF02602 Uroporphyrinogen-III synthase HemD 33 272 1.0E-36 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_1307 c43687894f912859c4be0c3db39841e5 285 Gene3D G3DSA:3.40.50.10090 27 271 2.2E-78 T 12-10-2018 BAMF_3403 eb1ca97b4456a50c888ca026c8befcd9 496 Gene3D G3DSA:3.40.50.12090 54 146 2.0E-8 T 12-10-2018 BAMF_3403 eb1ca97b4456a50c888ca026c8befcd9 496 Gene3D G3DSA:3.40.630.40 318 496 1.4E-61 T 12-10-2018 BAMF_3403 eb1ca97b4456a50c888ca026c8befcd9 496 Pfam PF04122 Putative cell wall binding repeat 2 129 214 6.6E-16 T 12-10-2018 IPR007253 Putative cell wall binding repeat 2 BAMF_3403 eb1ca97b4456a50c888ca026c8befcd9 496 Pfam PF04122 Putative cell wall binding repeat 2 30 115 1.4E-16 T 12-10-2018 IPR007253 Putative cell wall binding repeat 2 BAMF_3403 eb1ca97b4456a50c888ca026c8befcd9 496 Pfam PF04122 Putative cell wall binding repeat 2 223 309 6.8E-14 T 12-10-2018 IPR007253 Putative cell wall binding repeat 2 BAMF_3403 eb1ca97b4456a50c888ca026c8befcd9 496 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 322 492 2.0E-54 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BAMF_3403 eb1ca97b4456a50c888ca026c8befcd9 496 SMART SM00646 380 492 1.8E-44 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BAMF_3403 eb1ca97b4456a50c888ca026c8befcd9 496 SUPERFAMILY SSF53187 320 496 2.57E-53 T 12-10-2018 BAMF_0258 dccdff7dd5ff9373e8c730cfe9a6b4f9 319 SUPERFAMILY SSF53807 16 316 4.81E-88 T 12-10-2018 BAMF_0258 dccdff7dd5ff9373e8c730cfe9a6b4f9 319 Gene3D G3DSA:3.40.50.1980 37 204 9.6E-68 T 12-10-2018 BAMF_0258 dccdff7dd5ff9373e8c730cfe9a6b4f9 319 Pfam PF01297 Zinc-uptake complex component A periplasmic 40 314 7.6E-80 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 BAMF_0258 dccdff7dd5ff9373e8c730cfe9a6b4f9 319 PRINTS PR00691 Adhesin B signature 37 58 1.0E-16 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BAMF_0258 dccdff7dd5ff9373e8c730cfe9a6b4f9 319 PRINTS PR00691 Adhesin B signature 62 80 1.0E-16 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BAMF_0258 dccdff7dd5ff9373e8c730cfe9a6b4f9 319 PRINTS PR00691 Adhesin B signature 146 165 1.0E-16 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BAMF_0258 dccdff7dd5ff9373e8c730cfe9a6b4f9 319 PRINTS PR00691 Adhesin B signature 81 100 1.0E-16 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BAMF_0258 dccdff7dd5ff9373e8c730cfe9a6b4f9 319 PRINTS PR00691 Adhesin B signature 202 219 1.0E-16 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BAMF_0258 dccdff7dd5ff9373e8c730cfe9a6b4f9 319 PRINTS PR00691 Adhesin B signature 295 313 1.0E-16 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BAMF_0258 dccdff7dd5ff9373e8c730cfe9a6b4f9 319 PRINTS PR00690 Adhesin family signature 202 223 6.7E-16 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BAMF_0258 dccdff7dd5ff9373e8c730cfe9a6b4f9 319 PRINTS PR00690 Adhesin family signature 81 98 6.7E-16 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BAMF_0258 dccdff7dd5ff9373e8c730cfe9a6b4f9 319 PRINTS PR00690 Adhesin family signature 68 81 6.7E-16 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BAMF_0258 dccdff7dd5ff9373e8c730cfe9a6b4f9 319 PRINTS PR00690 Adhesin family signature 255 273 6.7E-16 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BAMF_0258 dccdff7dd5ff9373e8c730cfe9a6b4f9 319 PRINTS PR00690 Adhesin family signature 37 55 6.7E-16 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BAMF_0258 dccdff7dd5ff9373e8c730cfe9a6b4f9 319 Gene3D G3DSA:3.40.50.1980 205 319 1.7E-43 T 12-10-2018 BAMF_2273 f26ecd0c97a784ccde94129411add752 319 Gene3D G3DSA:3.40.50.300 2 319 1.8E-92 T 12-10-2018 BAMF_2273 f26ecd0c97a784ccde94129411add752 319 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 91 245 7.9E-14 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 BAMF_2273 f26ecd0c97a784ccde94129411add752 319 Hamap MF_00215 Pantothenate kinase [coaA]. 1 319 154.621 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BAMF_2273 f26ecd0c97a784ccde94129411add752 319 PIRSF PIRSF000545 1 319 2.0E-139 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BAMF_2273 f26ecd0c97a784ccde94129411add752 319 SUPERFAMILY SSF52540 10 317 5.74E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2273 f26ecd0c97a784ccde94129411add752 319 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 11 318 6.3E-161 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BAMF_1140 3f513cef004300de2dd0d5bf80334e3f 171 Pfam PF00717 Peptidase S24-like 29 97 1.9E-16 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BAMF_1140 3f513cef004300de2dd0d5bf80334e3f 171 ProSitePatterns PS00501 Signal peptidases I serine active site. 32 39 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 BAMF_1140 3f513cef004300de2dd0d5bf80334e3f 171 SUPERFAMILY SSF51306 25 166 1.1E-41 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BAMF_1140 3f513cef004300de2dd0d5bf80334e3f 171 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 23 39 1.3E-17 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BAMF_1140 3f513cef004300de2dd0d5bf80334e3f 171 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 132 151 1.3E-17 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BAMF_1140 3f513cef004300de2dd0d5bf80334e3f 171 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 73 85 1.3E-17 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BAMF_1140 3f513cef004300de2dd0d5bf80334e3f 171 ProSitePatterns PS00761 Signal peptidases I signature 3. 137 150 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 BAMF_1140 3f513cef004300de2dd0d5bf80334e3f 171 ProSitePatterns PS00760 Signal peptidases I lysine active site. 75 87 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 BAMF_1140 3f513cef004300de2dd0d5bf80334e3f 171 Gene3D G3DSA:2.10.109.10 54 168 3.3E-35 T 12-10-2018 BAMF_1140 3f513cef004300de2dd0d5bf80334e3f 171 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 9 165 1.5E-43 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BAMF_1542 1251fd6c116c20a09a2247e1a0e3b4a0 210 Gene3D G3DSA:3.30.930.20 1 210 6.8E-92 T 12-10-2018 BAMF_1542 1251fd6c116c20a09a2247e1a0e3b4a0 210 Pfam PF06335 Protein of unknown function (DUF1054) 6 203 3.8E-85 T 12-10-2018 IPR009403 Protein of unknown function UPF0637 BAMF_1542 1251fd6c116c20a09a2247e1a0e3b4a0 210 PIRSF PIRSF021332 1 209 3.0E-89 T 12-10-2018 IPR009403 Protein of unknown function UPF0637 BAMF_1542 1251fd6c116c20a09a2247e1a0e3b4a0 210 Hamap MF_01851 UPF0637 protein . 5 205 38.503 T 12-10-2018 IPR009403 Protein of unknown function UPF0637 BAMF_1542 1251fd6c116c20a09a2247e1a0e3b4a0 210 SUPERFAMILY SSF142913 3 208 3.92E-85 T 12-10-2018 BAMF_1427 4f11e3224911d17aa3bdbe35075f6d86 392 Pfam PF12791 Anti-sigma factor N-terminus 7 54 1.8E-11 T 12-10-2018 IPR024449 Anti-sigma factor RsgI, N-terminal BAMF_2447 407976ef2f9836ab3f069b71b69d5faa 379 Pfam PF06969 HemN C-terminal domain 301 364 2.2E-14 T 12-10-2018 IPR010723 HemN, C-terminal BAMF_2447 407976ef2f9836ab3f069b71b69d5faa 379 Pfam PF04055 Radical SAM superfamily 6 176 4.4E-24 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BAMF_2447 407976ef2f9836ab3f069b71b69d5faa 379 Gene3D G3DSA:3.80.30.20 1 300 7.3E-105 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BAMF_2447 407976ef2f9836ab3f069b71b69d5faa 379 SUPERFAMILY SSF102114 3 376 1.44E-120 T 12-10-2018 BAMF_2447 407976ef2f9836ab3f069b71b69d5faa 379 SMART SM00729 1 222 3.9E-63 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BAMF_2447 407976ef2f9836ab3f069b71b69d5faa 379 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 2 367 2.4E-162 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 BAMF_3840 64323400cd9b24408545a5a59af0f9ef 326 SUPERFAMILY SSF51430 1 305 8.25E-103 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_3840 64323400cd9b24408545a5a59af0f9ef 326 Pfam PF00248 Aldo/keto reductase family 14 304 1.2E-78 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain BAMF_3840 64323400cd9b24408545a5a59af0f9ef 326 Gene3D G3DSA:3.20.20.100 1 325 4.8E-121 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BAMF_3840 64323400cd9b24408545a5a59af0f9ef 326 PRINTS PR00069 Aldo-keto reductase signature 137 154 3.0E-5 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_3840 64323400cd9b24408545a5a59af0f9ef 326 PRINTS PR00069 Aldo-keto reductase signature 106 124 3.0E-5 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BAMF_2294 3b3ccbf0158b4bd6dbf4d3f961176406 317 Gene3D G3DSA:1.20.120.940 141 314 2.5E-56 T 12-10-2018 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily BAMF_2294 3b3ccbf0158b4bd6dbf4d3f961176406 317 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 146 310 2.1E-59 T 12-10-2018 IPR021062 Putative aromatic acid exporter, C-terminal BAMF_2294 3b3ccbf0158b4bd6dbf4d3f961176406 317 Pfam PF06081 Aromatic acid exporter family member 1 2 142 4.6E-54 T 12-10-2018 IPR010343 Aromatic acid exporter family member 1 BAMF_3877 d83eac2698e5458510394347b58d926e 123 SUPERFAMILY SSF46785 6 106 5.81E-33 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3877 d83eac2698e5458510394347b58d926e 123 Gene3D G3DSA:1.10.10.10 1 110 2.1E-39 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3877 d83eac2698e5458510394347b58d926e 123 Pfam PF01638 HxlR-like helix-turn-helix 18 104 8.4E-39 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type BAMF_0190 b767292959855fe96cf546d2ba70fea8 143 Gene3D G3DSA:1.10.10.10 2 141 1.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0190 b767292959855fe96cf546d2ba70fea8 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 2.6E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0190 b767292959855fe96cf546d2ba70fea8 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 2.6E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0190 b767292959855fe96cf546d2ba70fea8 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 2.6E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0190 b767292959855fe96cf546d2ba70fea8 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 2.6E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0190 b767292959855fe96cf546d2ba70fea8 143 Pfam PF01047 MarR family 35 91 4.8E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0190 b767292959855fe96cf546d2ba70fea8 143 SMART SM00347 27 127 3.3E-19 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0190 b767292959855fe96cf546d2ba70fea8 143 SUPERFAMILY SSF46785 27 141 7.01E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0190 b767292959855fe96cf546d2ba70fea8 143 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BAMF_2070 b1e9bcbe8a6078c34ea9df222ed74f9a 196 Gene3D G3DSA:3.40.50.720 1 158 2.3E-50 T 12-10-2018 BAMF_2070 b1e9bcbe8a6078c34ea9df222ed74f9a 196 SUPERFAMILY SSF51735 2 130 1.97E-15 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2070 b1e9bcbe8a6078c34ea9df222ed74f9a 196 Gene3D G3DSA:3.90.25.30 33 132 2.3E-50 T 12-10-2018 BAMF_2070 b1e9bcbe8a6078c34ea9df222ed74f9a 196 Pfam PF02719 Polysaccharide biosynthesis protein 1 151 2.3E-44 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BAMF_2604 6fec871ab98d76ac89bff7539b1acf9b 267 Pfam PF01551 Peptidase family M23 169 259 2.0E-11 T 12-10-2018 IPR016047 Peptidase M23 BAMF_2604 6fec871ab98d76ac89bff7539b1acf9b 267 SUPERFAMILY SSF51261 154 261 8.89E-8 T 12-10-2018 IPR011055 Duplicated hybrid motif BAMF_2604 6fec871ab98d76ac89bff7539b1acf9b 267 Gene3D G3DSA:2.70.70.10 138 266 1.4E-11 T 12-10-2018 IPR011055 Duplicated hybrid motif BAMF_2878 0671e5f360aa7408aff7b7054c3aa8bb 120 SUPERFAMILY SSF51182 30 97 9.93E-11 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BAMF_2878 0671e5f360aa7408aff7b7054c3aa8bb 120 Pfam PF00190 Cupin 32 86 1.9E-5 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 BAMF_2878 0671e5f360aa7408aff7b7054c3aa8bb 120 Gene3D G3DSA:2.60.120.10 2 108 1.1E-10 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_1880 003dc08ff30004810a04f19821e9976a 120 SMART SM00448 2 114 1.3E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_1880 003dc08ff30004810a04f19821e9976a 120 Gene3D G3DSA:3.40.50.2300 1 120 3.9E-34 T 12-10-2018 BAMF_1880 003dc08ff30004810a04f19821e9976a 120 SUPERFAMILY SSF52172 1 118 2.7E-35 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_1880 003dc08ff30004810a04f19821e9976a 120 Pfam PF00072 Response regulator receiver domain 4 114 1.4E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0225 42735a847a46dbc03f9674680b7d33a3 430 SMART SM00387 311 422 1.8E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0225 42735a847a46dbc03f9674680b7d33a3 430 Gene3D G3DSA:3.30.565.10 272 422 1.3E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0225 42735a847a46dbc03f9674680b7d33a3 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 401 3.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0225 42735a847a46dbc03f9674680b7d33a3 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 419 3.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0225 42735a847a46dbc03f9674680b7d33a3 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 363 3.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0225 42735a847a46dbc03f9674680b7d33a3 430 SUPERFAMILY SSF55874 274 419 4.06E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0225 42735a847a46dbc03f9674680b7d33a3 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 420 1.4E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2183 d1521449f85aed8c3eeb0d99dfd7fb2c 62 ProDom PD054986 YPHE TRANSMEMBRANE MEMBRANE PRECURSOR BH1643 SIGNAL 1 62 1.0E-21 T 12-10-2018 IPR020076 Protein of unknown function DUF2768 BAMF_2183 d1521449f85aed8c3eeb0d99dfd7fb2c 62 Pfam PF10966 Protein of unknown function (DUF2768) 2 59 5.2E-25 T 12-10-2018 IPR020076 Protein of unknown function DUF2768 BAMF_1526 b7fea3f581abaaf3f7562d5ca1ad77a0 577 Gene3D G3DSA:2.30.40.10 12 350 4.1E-127 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_1526 b7fea3f581abaaf3f7562d5ca1ad77a0 577 SUPERFAMILY SSF51338 11 357 2.16E-20 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BAMF_1526 b7fea3f581abaaf3f7562d5ca1ad77a0 577 Hamap MF_01518 Adenine deaminase [ade]. 20 575 38.968 T 12-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 BAMF_1526 b7fea3f581abaaf3f7562d5ca1ad77a0 577 TIGRFAM TIGR01178 ade: adenine deaminase 20 575 6.3E-235 T 12-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 BAMF_1526 b7fea3f581abaaf3f7562d5ca1ad77a0 577 SUPERFAMILY SSF51556 70 318 6.56E-43 T 12-10-2018 IPR032466 Metal-dependent hydrolase BAMF_1526 b7fea3f581abaaf3f7562d5ca1ad77a0 577 Gene3D G3DSA:3.20.20.140 70 313 4.1E-127 T 12-10-2018 BAMF_1526 b7fea3f581abaaf3f7562d5ca1ad77a0 577 Pfam PF13382 Adenine deaminase C-terminal domain 406 572 3.6E-59 T 12-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 BAMF_1526 b7fea3f581abaaf3f7562d5ca1ad77a0 577 Pfam PF01979 Amidohydrolase family 66 349 1.9E-40 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BAMF_0960 bbfcbe56e87e58b3589330983f3aa90d 69 ProDom PD019268 UVIB BACTERIOCIN BHLA PLASMID ANTIBIOTIC HOLIN-LIKE PRECURSOR ANTIMICROBIAL SIGNAL PROPHAGE-DERIVED 5 59 3.0E-24 T 12-10-2018 IPR024405 Prophage protein BhlA/UviB BAMF_0960 bbfcbe56e87e58b3589330983f3aa90d 69 Pfam PF10960 BhlA holin family 6 60 1.6E-15 T 12-10-2018 IPR024405 Prophage protein BhlA/UviB BAMF_1618 e2d52224fea95f7d60e7c7003a5bd426 181 SUPERFAMILY SSF53271 5 172 1.05E-43 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BAMF_1618 e2d52224fea95f7d60e7c7003a5bd426 181 Pfam PF00156 Phosphoribosyl transferase domain 7 151 3.6E-22 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BAMF_1618 e2d52224fea95f7d60e7c7003a5bd426 181 Gene3D G3DSA:3.40.50.2020 1 181 1.7E-63 T 12-10-2018 BAMF_1618 e2d52224fea95f7d60e7c7003a5bd426 181 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 4 179 39.16 T 12-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BAMF_1165 502149e1b2d5c94cd45d72e8c901ce8a 247 Gene3D G3DSA:1.10.600.10 1 246 3.2E-57 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BAMF_1165 502149e1b2d5c94cd45d72e8c901ce8a 247 Pfam PF00494 Squalene/phytoene synthase 21 243 9.3E-37 T 12-10-2018 BAMF_1165 502149e1b2d5c94cd45d72e8c901ce8a 247 SUPERFAMILY SSF48576 4 243 1.25E-36 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BAMF_0520 d784188993b0e15a38b1c74030fd1082 109 Gene3D G3DSA:1.10.3730.20 1 105 1.1E-19 T 12-10-2018 BAMF_0520 d784188993b0e15a38b1c74030fd1082 109 Pfam PF00893 Small Multidrug Resistance protein 1 89 1.3E-21 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BAMF_0520 d784188993b0e15a38b1c74030fd1082 109 SUPERFAMILY SSF103481 5 99 3.27E-12 T 12-10-2018 BAMF_0440 06caf50451c5e544533d27a2ae8120ce 335 SUPERFAMILY SSF89392 28 203 5.89E-22 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX BAMF_0440 06caf50451c5e544533d27a2ae8120ce 335 Gene3D G3DSA:2.50.20.10 28 211 1.6E-10 T 12-10-2018 BAMF_2187 7914388043bb94355fa9c585df509487 43 Pfam PF14140 YpzI-like protein 1 42 1.9E-25 T 12-10-2018 IPR025414 YpzI-like protein BAMF_0089 bd73d3eee56af57dcece6274fa3ed294 232 SUPERFAMILY SSF53448 3 224 1.75E-63 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0089 bd73d3eee56af57dcece6274fa3ed294 232 Gene3D G3DSA:3.90.550.10 1 232 5.5E-87 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0089 bd73d3eee56af57dcece6274fa3ed294 232 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4 224 1.1E-85 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BAMF_0089 bd73d3eee56af57dcece6274fa3ed294 232 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 100 107 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BAMF_0089 bd73d3eee56af57dcece6274fa3ed294 232 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 223 43.788 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BAMF_0089 bd73d3eee56af57dcece6274fa3ed294 232 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 223 1.9E-80 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BAMF_2581 d4e7d90791c41eb1b3abbdf778134f44 381 Gene3D G3DSA:3.20.20.105 2 375 4.5E-172 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BAMF_2581 d4e7d90791c41eb1b3abbdf778134f44 381 Pfam PF01702 Queuine tRNA-ribosyltransferase 134 367 5.1E-95 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BAMF_2581 d4e7d90791c41eb1b3abbdf778134f44 381 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 6 370 57.758 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BAMF_2581 d4e7d90791c41eb1b3abbdf778134f44 381 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 8 375 7.6E-179 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BAMF_2581 d4e7d90791c41eb1b3abbdf778134f44 381 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 375 2.8E-189 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BAMF_2581 d4e7d90791c41eb1b3abbdf778134f44 381 SUPERFAMILY SSF51713 7 371 2.62E-163 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BAMF_2170 62bda8d5e31b35c1d11bae02dbc12aa4 127 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 3 119 1.4E-47 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BAMF_2170 62bda8d5e31b35c1d11bae02dbc12aa4 127 SUPERFAMILY SSF55298 1 126 1.49E-49 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BAMF_2170 62bda8d5e31b35c1d11bae02dbc12aa4 127 Gene3D G3DSA:3.30.1330.40 1 127 8.4E-54 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BAMF_2170 62bda8d5e31b35c1d11bae02dbc12aa4 127 Pfam PF07736 Chorismate mutase type I 3 119 4.9E-48 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BAMF_2170 62bda8d5e31b35c1d11bae02dbc12aa4 127 PIRSF PIRSF005965 1 125 6.8E-52 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BAMF_2170 62bda8d5e31b35c1d11bae02dbc12aa4 127 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 9 127 1.0E-54 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BAMF_0597 e00779cca274242b2ab308721382f2a3 55 Gene3D G3DSA:1.10.10.1530 2 52 4.7E-7 T 12-10-2018 BAMF_0597 e00779cca274242b2ab308721382f2a3 55 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 24 46 5.0E-6 T 12-10-2018 IPR010022 Protein of unknown function XkdX BAMF_3447 1b61946813a7d8d3da49e4c00a9424a3 443 PRINTS PR00758 Arsenical pump membrane protein signature 377 402 8.5E-37 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_3447 1b61946813a7d8d3da49e4c00a9424a3 443 PRINTS PR00758 Arsenical pump membrane protein signature 99 123 8.5E-37 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_3447 1b61946813a7d8d3da49e4c00a9424a3 443 PRINTS PR00758 Arsenical pump membrane protein signature 336 358 8.5E-37 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_3447 1b61946813a7d8d3da49e4c00a9424a3 443 PRINTS PR00758 Arsenical pump membrane protein signature 291 315 8.5E-37 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_3447 1b61946813a7d8d3da49e4c00a9424a3 443 PRINTS PR00758 Arsenical pump membrane protein signature 410 434 8.5E-37 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_3447 1b61946813a7d8d3da49e4c00a9424a3 443 Pfam PF02040 Arsenical pump membrane protein 3 438 1.4E-63 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BAMF_1625 1a268997c8b227899548d564f77f76c2 311 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 2 300 1.9E-135 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 BAMF_1625 1a268997c8b227899548d564f77f76c2 311 Pfam PF01180 Dihydroorotate dehydrogenase 1 284 1.0E-96 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 BAMF_1625 1a268997c8b227899548d564f77f76c2 311 PIRSF PIRSF000164 1 301 1.3E-88 T 12-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 BAMF_1625 1a268997c8b227899548d564f77f76c2 311 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 237 257 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 BAMF_1625 1a268997c8b227899548d564f77f76c2 311 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 38 57 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 BAMF_1625 1a268997c8b227899548d564f77f76c2 311 Gene3D G3DSA:3.20.20.70 1 303 4.8E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_1625 1a268997c8b227899548d564f77f76c2 311 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 2 299 41.735 T 12-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 BAMF_1625 1a268997c8b227899548d564f77f76c2 311 SUPERFAMILY SSF51395 2 300 1.53E-88 T 12-10-2018 BAMF_3404 c35893b5dbac9564406f05d093685df8 705 Pfam PF04122 Putative cell wall binding repeat 2 64 151 3.0E-14 T 12-10-2018 IPR007253 Putative cell wall binding repeat 2 BAMF_3404 c35893b5dbac9564406f05d093685df8 705 Pfam PF04122 Putative cell wall binding repeat 2 252 339 5.8E-10 T 12-10-2018 IPR007253 Putative cell wall binding repeat 2 BAMF_3404 c35893b5dbac9564406f05d093685df8 705 Pfam PF04122 Putative cell wall binding repeat 2 162 241 4.9E-16 T 12-10-2018 IPR007253 Putative cell wall binding repeat 2 BAMF_3404 c35893b5dbac9564406f05d093685df8 705 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 413 703 1.9E-77 T 12-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 BAMF_3404 c35893b5dbac9564406f05d093685df8 705 Pfam PF08486 Stage II sporulation protein 414 490 1.0E-23 T 12-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal BAMF_1182 fb85de1ba13abfbaa4ac1276706d2e96 280 Gene3D G3DSA:3.30.70.120 193 268 3.7E-21 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BAMF_1182 fb85de1ba13abfbaa4ac1276706d2e96 280 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 215 9.5E-60 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BAMF_1182 fb85de1ba13abfbaa4ac1276706d2e96 280 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 221 275 2.7E-19 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 BAMF_1182 fb85de1ba13abfbaa4ac1276706d2e96 280 PIRSF PIRSF006483 1 280 2.0E-98 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BAMF_1654 f918e7f47437ba6d4877f54d7c18753f 62 Gene3D G3DSA:2.30.170.40 19 62 2.7E-18 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1654 f918e7f47437ba6d4877f54d7c18753f 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 3.0E-23 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_1654 f918e7f47437ba6d4877f54d7c18753f 62 SUPERFAMILY SSF143800 1 60 3.53E-24 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1654 f918e7f47437ba6d4877f54d7c18753f 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 19.847 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_1654 f918e7f47437ba6d4877f54d7c18753f 62 Pfam PF00830 Ribosomal L28 family 3 58 7.4E-21 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3391 569812c79a68eb7f0af62ab108ba5291 387 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 291 384 4.7E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3391 569812c79a68eb7f0af62ab108ba5291 387 PIRSF PIRSF003169 1 386 2.5E-165 T 12-10-2018 IPR016381 Signal transduction histidine kinase, DegS GO:0000155|GO:0000160|GO:0004673 BAMF_3391 569812c79a68eb7f0af62ab108ba5291 387 SMART SM00387 289 385 1.5E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_3391 569812c79a68eb7f0af62ab108ba5291 387 Gene3D G3DSA:3.30.565.10 256 383 5.0E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3391 569812c79a68eb7f0af62ab108ba5291 387 Pfam PF05384 Sensor protein DegS 12 170 3.9E-58 T 12-10-2018 IPR008595 Sensor DegS GO:0007165|GO:0016301 BAMF_3391 569812c79a68eb7f0af62ab108ba5291 387 SUPERFAMILY SSF55874 255 383 1.03E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3391 569812c79a68eb7f0af62ab108ba5291 387 Pfam PF07730 Histidine kinase 180 248 1.7E-16 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BAMF_3748 c4c5e8005e042f58b7a592df1859f310 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 427 439 1.5E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_3748 c4c5e8005e042f58b7a592df1859f310 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 1.5E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_3748 c4c5e8005e042f58b7a592df1859f310 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 402 419 1.5E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_3748 c4c5e8005e042f58b7a592df1859f310 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 294 308 1.5E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_3748 c4c5e8005e042f58b7a592df1859f310 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 381 392 1.5E-16 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_3748 c4c5e8005e042f58b7a592df1859f310 465 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 360 368 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site BAMF_3748 c4c5e8005e042f58b7a592df1859f310 465 SUPERFAMILY SSF51445 2 458 1.19E-168 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_3748 c4c5e8005e042f58b7a592df1859f310 465 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BAMF_3748 c4c5e8005e042f58b7a592df1859f310 465 Pfam PF00232 Glycosyl hydrolase family 1 2 462 7.8E-151 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_3748 c4c5e8005e042f58b7a592df1859f310 465 Gene3D G3DSA:3.20.20.80 3 465 3.6E-161 T 12-10-2018 BAMF_3207 3f26f786f2bd2bb930a15051ba306786 235 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 122 7.6E-13 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BAMF_3207 3f26f786f2bd2bb930a15051ba306786 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 227 6.8E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_3207 3f26f786f2bd2bb930a15051ba306786 235 SUPERFAMILY SSF161098 13 213 1.57E-31 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3207 3f26f786f2bd2bb930a15051ba306786 235 Gene3D G3DSA:1.10.3720.10 3 230 2.2E-37 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2574 d63653276972822cbf7252c6967ad34b 165 PIRSF PIRSF005028 1 163 7.5E-56 T 12-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT BAMF_2574 d63653276972822cbf7252c6967ad34b 165 SUPERFAMILY SSF116726 84 157 5.49E-14 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BAMF_2574 d63653276972822cbf7252c6967ad34b 165 Pfam PF02080 TrkA-C domain 90 159 1.6E-12 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BAMF_2574 d63653276972822cbf7252c6967ad34b 165 Gene3D G3DSA:3.30.70.1450 85 161 6.8E-15 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BAMF_2873 3c9c54eede7ffd00143d22149dc175cb 186 Gene3D G3DSA:1.10.10.10 8 91 1.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2873 3c9c54eede7ffd00143d22149dc175cb 186 PIRSF PIRSF006707 1 185 7.2E-54 T 12-10-2018 IPR026282 DNA-binding protein, MJ1563 type BAMF_2873 3c9c54eede7ffd00143d22149dc175cb 186 SUPERFAMILY SSF46785 9 159 4.39E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1373 b1664c1eec10bbf8874998e02f02f37f 205 Gene3D G3DSA:1.20.58.220 9 205 9.6E-53 T 12-10-2018 IPR038078 PhoU-like domain superfamily BAMF_1373 b1664c1eec10bbf8874998e02f02f37f 205 Pfam PF01865 Protein of unknown function DUF47 9 202 1.4E-22 T 12-10-2018 IPR018445 Putative phosphate transport regulator BAMF_1373 b1664c1eec10bbf8874998e02f02f37f 205 SUPERFAMILY SSF109755 78 197 4.45E-5 T 12-10-2018 BAMF_0726 5aeebf2b228561694366d57a59c784c5 534 SMART SM00387 420 528 4.0E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0726 5aeebf2b228561694366d57a59c784c5 534 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 527 4.4E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_0726 5aeebf2b228561694366d57a59c784c5 534 Gene3D G3DSA:3.30.450.20 37 167 1.9E-11 T 12-10-2018 BAMF_0726 5aeebf2b228561694366d57a59c784c5 534 Gene3D G3DSA:3.30.450.20 202 315 2.1E-20 T 12-10-2018 BAMF_0726 5aeebf2b228561694366d57a59c784c5 534 SUPERFAMILY SSF55785 224 309 4.49E-7 T 12-10-2018 IPR035965 PAS domain superfamily BAMF_0726 5aeebf2b228561694366d57a59c784c5 534 Pfam PF17203 Single cache domain 3 43 174 2.0E-7 T 12-10-2018 IPR033463 Single cache domain 3 BAMF_0726 5aeebf2b228561694366d57a59c784c5 534 SUPERFAMILY SSF103190 41 167 1.77E-14 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BAMF_0726 5aeebf2b228561694366d57a59c784c5 534 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 323 370 1.7E-7 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain BAMF_0726 5aeebf2b228561694366d57a59c784c5 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 2.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0726 5aeebf2b228561694366d57a59c784c5 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 2.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0726 5aeebf2b228561694366d57a59c784c5 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 2.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0726 5aeebf2b228561694366d57a59c784c5 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 2.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BAMF_0726 5aeebf2b228561694366d57a59c784c5 534 SUPERFAMILY SSF55874 397 526 1.83E-21 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0726 5aeebf2b228561694366d57a59c784c5 534 SUPERFAMILY SSF55890 326 392 4.18E-8 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 BAMF_0726 5aeebf2b228561694366d57a59c784c5 534 Gene3D G3DSA:3.30.565.10 375 525 1.0E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2998 fe54f3812e81ceaadcd6e3a6f35d239f 198 SUPERFAMILY SSF56524 10 198 2.49E-62 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 BAMF_2998 fe54f3812e81ceaadcd6e3a6f35d239f 198 Pfam PF00174 Oxidoreductase molybdopterin binding domain 32 178 5.3E-38 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 BAMF_2998 fe54f3812e81ceaadcd6e3a6f35d239f 198 Gene3D G3DSA:3.90.420.10 5 196 2.2E-47 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 BAMF_2495 10b4b03f6f55b4b3d6782af64bf3201f 92 ProDom PD028957 PBSX RELATED XKDR ELEMENT LIN1285 PHAGE PHAGE-LIKE YQBR 19 92 3.0E-31 T 12-10-2018 IPR022555 Protein of unknown function, DUF2577 BAMF_1686 c526352a76414d9e6e3bc2b87583f760 181 SUPERFAMILY SSF56235 4 180 5.5E-59 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BAMF_1686 c526352a76414d9e6e3bc2b87583f760 181 PIRSF PIRSF039093 1 181 2.0E-84 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BAMF_1686 c526352a76414d9e6e3bc2b87583f760 181 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 180 1.9E-82 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BAMF_1686 c526352a76414d9e6e3bc2b87583f760 181 Pfam PF00227 Proteasome subunit 5 177 2.4E-26 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 BAMF_1686 c526352a76414d9e6e3bc2b87583f760 181 Gene3D G3DSA:3.60.20.10 2 181 8.0E-68 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BAMF_1686 c526352a76414d9e6e3bc2b87583f760 181 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 180 40.858 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BAMF_0025 528a0d2713dc8e8172cfd02ea4c57929 204 Pfam PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 10 198 5.3E-61 T 12-10-2018 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein BAMF_0776 52a139bcc93327eba6776188c638a59c 460 SUPERFAMILY SSF52743 145 455 1.09E-63 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BAMF_0776 52a139bcc93327eba6776188c638a59c 460 Pfam PF00082 Subtilase family 153 447 9.6E-42 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BAMF_0776 52a139bcc93327eba6776188c638a59c 460 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 156 167 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BAMF_0776 52a139bcc93327eba6776188c638a59c 460 PRINTS PR00723 Subtilisin serine protease family (S8) signature 392 408 2.9E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_0776 52a139bcc93327eba6776188c638a59c 460 PRINTS PR00723 Subtilisin serine protease family (S8) signature 151 170 2.9E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_0776 52a139bcc93327eba6776188c638a59c 460 PRINTS PR00723 Subtilisin serine protease family (S8) signature 190 203 2.9E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BAMF_0776 52a139bcc93327eba6776188c638a59c 460 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 393 403 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BAMF_0776 52a139bcc93327eba6776188c638a59c 460 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 194 204 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BAMF_0776 52a139bcc93327eba6776188c638a59c 460 Gene3D G3DSA:3.40.50.200 117 458 6.0E-79 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BAMF_0290 7ef918132eb9ac0fe5188962ed491b30 186 Gene3D G3DSA:3.40.50.300 9 180 1.5E-42 T 12-10-2018 BAMF_0290 7ef918132eb9ac0fe5188962ed491b30 186 ProSitePatterns PS01128 Shikimate kinase signature. 67 93 - T 12-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BAMF_0290 7ef918132eb9ac0fe5188962ed491b30 186 PRINTS PR01100 Shikimate kinase family signature 85 94 7.9E-14 T 12-10-2018 BAMF_0290 7ef918132eb9ac0fe5188962ed491b30 186 PRINTS PR01100 Shikimate kinase family signature 38 51 7.9E-14 T 12-10-2018 BAMF_0290 7ef918132eb9ac0fe5188962ed491b30 186 PRINTS PR01100 Shikimate kinase family signature 14 29 7.9E-14 T 12-10-2018 BAMF_0290 7ef918132eb9ac0fe5188962ed491b30 186 PRINTS PR01100 Shikimate kinase family signature 66 74 7.9E-14 T 12-10-2018 BAMF_0290 7ef918132eb9ac0fe5188962ed491b30 186 Pfam PF01202 Shikimate kinase 20 177 1.7E-43 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BAMF_0290 7ef918132eb9ac0fe5188962ed491b30 186 SUPERFAMILY SSF52540 12 176 5.11E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0290 7ef918132eb9ac0fe5188962ed491b30 186 Hamap MF_00109 Shikimate kinase [aroK]. 11 177 23.994 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BAMF_3512 36cfb711770ac9de44cc6a51c0b45059 344 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 72 331 1.9E-70 T 12-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 BAMF_3512 36cfb711770ac9de44cc6a51c0b45059 344 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 5 332 8.4E-132 T 12-10-2018 IPR014225 Sporulation stage II, protein D firmicutes BAMF_3512 36cfb711770ac9de44cc6a51c0b45059 344 Pfam PF08486 Stage II sporulation protein 68 172 2.8E-23 T 12-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal BAMF_0464 ba0ec13cd249510802780d889f55cd51 431 Gene3D G3DSA:1.20.1250.20 27 424 3.5E-35 T 12-10-2018 BAMF_0464 ba0ec13cd249510802780d889f55cd51 431 Pfam PF07690 Major Facilitator Superfamily 52 292 6.4E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0464 ba0ec13cd249510802780d889f55cd51 431 SUPERFAMILY SSF103473 27 426 2.09E-41 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_2470 9eebcc42b316edb24a635f1bbeeae480 208 Pfam PF09335 SNARE associated Golgi protein 53 171 3.3E-24 T 12-10-2018 IPR032816 SNARE associated Golgi protein BAMF_0360 428c8dbf36a54aac1f0db959fbd083f6 287 Pfam PF06800 Sugar transport protein 4 282 1.6E-110 T 12-10-2018 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 BAMF_0360 428c8dbf36a54aac1f0db959fbd083f6 287 SUPERFAMILY SSF103481 36 138 3.27E-8 T 12-10-2018 BAMF_0360 428c8dbf36a54aac1f0db959fbd083f6 287 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 1 284 8.0E-116 T 12-10-2018 BAMF_1605 8450a95c720ae96b911c901dd516357e 265 SUPERFAMILY SSF52540 2 237 5.44E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1605 8450a95c720ae96b911c901dd516357e 265 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_1605 8450a95c720ae96b911c901dd516357e 265 SMART SM00382 27 220 6.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1605 8450a95c720ae96b911c901dd516357e 265 Pfam PF00005 ABC transporter 18 169 8.3E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1605 8450a95c720ae96b911c901dd516357e 265 Gene3D G3DSA:3.40.50.300 1 252 2.3E-60 T 12-10-2018 BAMF_3112 b26bbbdca270576a1b64d819c5f928b7 123 Gene3D G3DSA:1.20.1290.10 3 119 1.6E-25 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BAMF_3112 b26bbbdca270576a1b64d819c5f928b7 123 SUPERFAMILY SSF69118 15 121 1.96E-24 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BAMF_3112 b26bbbdca270576a1b64d819c5f928b7 123 Pfam PF02627 Carboxymuconolactone decarboxylase family 32 111 1.1E-16 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BAMF_0115 e3951e97f9f82491c34b4f58bf503c25 102 SUPERFAMILY SSF54999 5 102 6.41E-39 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily BAMF_0115 e3951e97f9f82491c34b4f58bf503c25 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 7.9E-37 T 12-10-2018 IPR027486 Ribosomal protein S10 domain BAMF_0115 e3951e97f9f82491c34b4f58bf503c25 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 6.3E-20 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0115 e3951e97f9f82491c34b4f58bf503c25 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 6.3E-20 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0115 e3951e97f9f82491c34b4f58bf503c25 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 6.3E-20 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0115 e3951e97f9f82491c34b4f58bf503c25 102 SMART SM01403 7 101 5.7E-61 T 12-10-2018 IPR027486 Ribosomal protein S10 domain BAMF_0115 e3951e97f9f82491c34b4f58bf503c25 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.4E-47 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0115 e3951e97f9f82491c34b4f58bf503c25 102 Gene3D G3DSA:3.30.70.600 1 102 1.1E-38 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily BAMF_0115 e3951e97f9f82491c34b4f58bf503c25 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0115 e3951e97f9f82491c34b4f58bf503c25 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.352 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_1490 018416aea2046b32b153e380080a8f6f 293 SUPERFAMILY SSF46785 2 111 8.02E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1490 018416aea2046b32b153e380080a8f6f 293 SUPERFAMILY SSF53850 88 290 8.25E-27 T 12-10-2018 BAMF_1490 018416aea2046b32b153e380080a8f6f 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_1490 018416aea2046b32b153e380080a8f6f 293 Gene3D G3DSA:3.40.190.290 83 286 3.1E-66 T 12-10-2018 BAMF_1490 018416aea2046b32b153e380080a8f6f 293 Pfam PF03466 LysR substrate binding domain 87 287 4.8E-32 T 12-10-2018 IPR005119 LysR, substrate-binding BAMF_1490 018416aea2046b32b153e380080a8f6f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_1490 018416aea2046b32b153e380080a8f6f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_1490 018416aea2046b32b153e380080a8f6f 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_1490 018416aea2046b32b153e380080a8f6f 293 Gene3D G3DSA:1.10.10.10 1 82 3.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0813 ce30e34546c3ba2114e0fdd3c912066f 130 Pfam PF10794 Protein of unknown function (DUF2606) 2 123 2.8E-27 T 12-10-2018 IPR019730 Protein of unknown function DUF2606 BAMF_0813 ce30e34546c3ba2114e0fdd3c912066f 130 Gene3D G3DSA:2.60.40.1120 46 130 2.8E-6 T 12-10-2018 BAMF_1034 7825180b713780f7ff918337530861f0 144 Gene3D G3DSA:1.10.10.10 1 141 2.2E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1034 7825180b713780f7ff918337530861f0 144 Pfam PF02082 Transcriptional regulator 1 81 6.4E-24 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type BAMF_1034 7825180b713780f7ff918337530861f0 144 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 6.1E-40 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type BAMF_1034 7825180b713780f7ff918337530861f0 144 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site BAMF_1034 7825180b713780f7ff918337530861f0 144 SUPERFAMILY SSF46785 2 136 1.47E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0472 d475468d06ac5deaa7b4011eae76149a 177 Pfam PF07883 Cupin domain 80 155 9.2E-13 T 12-10-2018 IPR013096 Cupin 2, conserved barrel BAMF_0472 d475468d06ac5deaa7b4011eae76149a 177 Gene3D G3DSA:2.60.120.10 55 177 3.8E-41 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_0472 d475468d06ac5deaa7b4011eae76149a 177 SUPERFAMILY SSF51182 43 161 1.49E-24 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BAMF_0514 def6938d3f03ab8bf168a8efc038e956 188 Gene3D G3DSA:2.30.30.1210 41 187 7.5E-68 T 12-10-2018 BAMF_0514 def6938d3f03ab8bf168a8efc038e956 188 Pfam PF07563 Protein of unknown function (DUF1541) 66 117 3.3E-24 T 12-10-2018 IPR011438 Domain of unknown function DUF1541 BAMF_0514 def6938d3f03ab8bf168a8efc038e956 188 Pfam PF07563 Protein of unknown function (DUF1541) 130 181 9.9E-28 T 12-10-2018 IPR011438 Domain of unknown function DUF1541 BAMF_0388 81a4ba73cbe790d182a5c5de3f78d381 140 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 7 125 8.0E-19 T 12-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain BAMF_0388 81a4ba73cbe790d182a5c5de3f78d381 140 Gene3D G3DSA:2.30.110.10 2 130 2.1E-40 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BAMF_0388 81a4ba73cbe790d182a5c5de3f78d381 140 SUPERFAMILY SSF50475 4 132 6.36E-31 T 12-10-2018 BAMF_1474 803cfbbddf0bda8f42e5403436f24506 710 Gene3D G3DSA:3.90.1310.30 219 591 8.6E-179 T 12-10-2018 BAMF_1474 803cfbbddf0bda8f42e5403436f24506 710 SUPERFAMILY SSF56519 59 341 1.96E-30 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BAMF_1474 803cfbbddf0bda8f42e5403436f24506 710 Gene3D G3DSA:3.90.1310.10 53 85 2.7E-28 T 12-10-2018 BAMF_1474 803cfbbddf0bda8f42e5403436f24506 710 SUPERFAMILY SSF56601 342 704 8.45E-68 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_1474 803cfbbddf0bda8f42e5403436f24506 710 Pfam PF00905 Penicillin binding protein transpeptidase domain 372 695 1.8E-78 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BAMF_1474 803cfbbddf0bda8f42e5403436f24506 710 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 326 1.5E-24 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BAMF_1474 803cfbbddf0bda8f42e5403436f24506 710 Gene3D G3DSA:1.10.10.1230 86 196 2.7E-28 T 12-10-2018 BAMF_1474 803cfbbddf0bda8f42e5403436f24506 710 Gene3D G3DSA:3.40.710.10 341 693 8.6E-179 T 12-10-2018 BAMF_1793 637a22e718c71d3a7d187ad1754ca580 243 Pfam PF06912 Protein of unknown function (DUF1275) 23 228 7.0E-41 T 12-10-2018 IPR010699 Protein of unknown function DUF1275 BAMF_0193 f25b1476ed8d60f08ca9c5136a8ee1e0 370 Gene3D G3DSA:3.30.565.10 246 368 1.4E-21 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_0193 f25b1476ed8d60f08ca9c5136a8ee1e0 370 Pfam PF07730 Histidine kinase 181 238 1.3E-11 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BAMF_0193 f25b1476ed8d60f08ca9c5136a8ee1e0 370 SUPERFAMILY SSF55874 245 366 1.66E-9 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1336 948a5d918bf6f24144f449ce58635a90 266 Pfam PF01695 IstB-like ATP binding protein 116 229 1.7E-9 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 BAMF_1336 948a5d918bf6f24144f449ce58635a90 266 SMART SM00382 116 242 4.1E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1336 948a5d918bf6f24144f449ce58635a90 266 Gene3D G3DSA:3.40.50.300 61 248 3.3E-34 T 12-10-2018 BAMF_1336 948a5d918bf6f24144f449ce58635a90 266 SUPERFAMILY SSF52540 81 257 2.42E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3907 c814fb4cc683b925ed5b03b674bab166 366 Gene3D G3DSA:3.40.50.300 4 281 8.1E-160 T 12-10-2018 BAMF_3907 c814fb4cc683b925ed5b03b674bab166 366 SUPERFAMILY SSF81271 282 363 4.58E-36 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BAMF_3907 c814fb4cc683b925ed5b03b674bab166 366 Pfam PF01926 50S ribosome-binding GTPase 5 125 1.2E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_3907 c814fb4cc683b925ed5b03b674bab166 366 Gene3D G3DSA:1.10.150.300 113 200 8.1E-160 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 BAMF_3907 c814fb4cc683b925ed5b03b674bab166 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 47.193 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BAMF_3907 c814fb4cc683b925ed5b03b674bab166 366 SUPERFAMILY SSF52540 3 304 3.78E-90 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3907 c814fb4cc683b925ed5b03b674bab166 366 PIRSF PIRSF006641 1 366 3.8E-167 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BAMF_3907 c814fb4cc683b925ed5b03b674bab166 366 Gene3D G3DSA:3.10.20.30 48 364 8.1E-160 T 12-10-2018 IPR012675 Beta-grasp domain superfamily BAMF_3907 c814fb4cc683b925ed5b03b674bab166 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.8E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_3907 c814fb4cc683b925ed5b03b674bab166 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.8E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_3907 c814fb4cc683b925ed5b03b674bab166 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.8E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_3907 c814fb4cc683b925ed5b03b674bab166 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.8E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_3907 c814fb4cc683b925ed5b03b674bab166 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 7.9E-40 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 BAMF_3907 c814fb4cc683b925ed5b03b674bab166 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 1.2E-159 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BAMF_1183 fe60ff51e4621b853d0b4d41756a9519 153 Gene3D G3DSA:2.60.40.2360 33 153 1.4E-40 T 12-10-2018 IPR038144 Intracellular proteinase inhibitor BAMF_1183 fe60ff51e4621b853d0b4d41756a9519 153 ProDom PD076312 INHIBITOR INTRACELLULAR PROTEINASE PRECURSOR SIGNAL DOMAIN SLH S-LAYER PROTEASE BSUPI 34 153 5.0E-27 T 12-10-2018 IPR020481 Intracellular proteinase inhibitor BsuPI BAMF_1183 fe60ff51e4621b853d0b4d41756a9519 153 Pfam PF12690 Intracellular proteinase inhibitor 52 128 3.1E-26 T 12-10-2018 IPR020481 Intracellular proteinase inhibitor BsuPI BAMF_1868 02d25e40282a3c3261210e74b65375f6 276 Pfam PF01145 SPFH domain / Band 7 family 35 218 2.0E-26 T 12-10-2018 IPR001107 Band 7 domain BAMF_1868 02d25e40282a3c3261210e74b65375f6 276 SUPERFAMILY SSF117892 66 203 9.02E-8 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily BAMF_0742 b2890aef4618e8421f1a91de030d2654 143 Pfam PF00011 Hsp20/alpha crystallin family 48 141 3.5E-8 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain BAMF_0742 b2890aef4618e8421f1a91de030d2654 143 Gene3D G3DSA:2.60.40.790 4 143 1.2E-12 T 12-10-2018 IPR008978 HSP20-like chaperone BAMF_0742 b2890aef4618e8421f1a91de030d2654 143 SUPERFAMILY SSF49764 38 137 3.38E-15 T 12-10-2018 IPR008978 HSP20-like chaperone BAMF_2395 7ac687d835d964380befe9b5926af554 268 Pfam PF00005 ABC transporter 38 192 4.3E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_2395 7ac687d835d964380befe9b5926af554 268 Gene3D G3DSA:3.40.50.300 19 266 6.0E-64 T 12-10-2018 BAMF_2395 7ac687d835d964380befe9b5926af554 268 SUPERFAMILY SSF52540 21 255 5.79E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2395 7ac687d835d964380befe9b5926af554 268 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_2395 7ac687d835d964380befe9b5926af554 268 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 22 268 1.6E-121 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 BAMF_2395 7ac687d835d964380befe9b5926af554 268 SMART SM00382 46 240 6.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0684 d5fa61136913a59f06d8b3368d951ccc 92 Pfam PF14150 YesK-like protein 4 84 4.3E-15 T 12-10-2018 IPR025434 YesK-like protein BAMF_2535 16f52591a41411187d67550ff97f667a 231 Pfam PF01048 Phosphorylase superfamily 2 227 6.4E-52 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BAMF_2535 16f52591a41411187d67550ff97f667a 231 SUPERFAMILY SSF53167 1 229 4.45E-72 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BAMF_2535 16f52591a41411187d67550ff97f667a 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 230 1.8E-133 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BAMF_2535 16f52591a41411187d67550ff97f667a 231 Gene3D G3DSA:3.40.50.1580 1 231 7.0E-71 T 12-10-2018 BAMF_2535 16f52591a41411187d67550ff97f667a 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.748 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BAMF_1756 0b653761848d3edcc3455d73b6c8880e 151 Pfam PF01047 MarR family 36 94 3.0E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1756 0b653761848d3edcc3455d73b6c8880e 151 SMART SM00347 29 129 4.3E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1756 0b653761848d3edcc3455d73b6c8880e 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 4.9E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1756 0b653761848d3edcc3455d73b6c8880e 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 4.9E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1756 0b653761848d3edcc3455d73b6c8880e 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 4.9E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1756 0b653761848d3edcc3455d73b6c8880e 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 4.9E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1756 0b653761848d3edcc3455d73b6c8880e 151 SUPERFAMILY SSF46785 8 144 5.46E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1756 0b653761848d3edcc3455d73b6c8880e 151 Gene3D G3DSA:1.10.10.10 2 149 7.3E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0263 e08989ad7c79d93334ef373651c83991 193 Pfam PF02342 TerD domain 1 188 3.2E-83 T 12-10-2018 IPR003325 TerD domain BAMF_0263 e08989ad7c79d93334ef373651c83991 193 Gene3D G3DSA:2.60.60.30 19 187 8.4E-70 T 12-10-2018 BAMF_0022 3d2bf26612ec4f8676f3ffe1cc54f30a 198 SUPERFAMILY SSF111304 1 198 1.96E-79 T 12-10-2018 IPR023627 Recombination protein RecR BAMF_0022 3d2bf26612ec4f8676f3ffe1cc54f30a 198 SMART SM00493 80 165 7.7E-20 T 12-10-2018 IPR006171 TOPRIM domain BAMF_0022 3d2bf26612ec4f8676f3ffe1cc54f30a 198 TIGRFAM TIGR00615 recR: recombination protein RecR 1 196 7.0E-92 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 BAMF_0022 3d2bf26612ec4f8676f3ffe1cc54f30a 198 Gene3D G3DSA:3.40.1360.10 77 198 5.3E-50 T 12-10-2018 BAMF_0022 3d2bf26612ec4f8676f3ffe1cc54f30a 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 12-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 BAMF_0022 3d2bf26612ec4f8676f3ffe1cc54f30a 198 Gene3D G3DSA:1.10.8.420 1 53 1.3E-20 T 12-10-2018 BAMF_0022 3d2bf26612ec4f8676f3ffe1cc54f30a 198 Pfam PF13662 Toprim domain 80 171 6.8E-26 T 12-10-2018 IPR006171 TOPRIM domain BAMF_0022 3d2bf26612ec4f8676f3ffe1cc54f30a 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 112.436 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 BAMF_0022 3d2bf26612ec4f8676f3ffe1cc54f30a 198 Pfam PF02132 RecR protein 40 78 1.5E-17 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger BAMF_3392 49b0a07d135a2bcc40d72bec1922bca1 215 Pfam PF01205 Uncharacterized protein family UPF0029 20 123 4.1E-32 T 12-10-2018 IPR001498 Impact, N-terminal BAMF_3392 49b0a07d135a2bcc40d72bec1922bca1 215 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 12-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site BAMF_3392 49b0a07d135a2bcc40d72bec1922bca1 215 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 7.4E-18 T 12-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal BAMF_3392 49b0a07d135a2bcc40d72bec1922bca1 215 SUPERFAMILY SSF54211 1 131 3.79E-44 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_3392 49b0a07d135a2bcc40d72bec1922bca1 215 SUPERFAMILY SSF54980 135 197 7.12E-9 T 12-10-2018 IPR035647 EF-G domain III/V-like BAMF_3392 49b0a07d135a2bcc40d72bec1922bca1 215 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 200 2.8E-86 T 12-10-2018 IPR015796 Impact family, bacterial/archaeal BAMF_3392 49b0a07d135a2bcc40d72bec1922bca1 215 Gene3D G3DSA:3.30.230.30 1 133 2.0E-52 T 12-10-2018 IPR036956 Impact, N-terminal domain superfamily BAMF_2295 979d74fae5bc9455266ff58c41c59c40 240 SMART SM00382 26 213 8.0E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2295 979d74fae5bc9455266ff58c41c59c40 240 SUPERFAMILY SSF52540 1 235 4.63E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2295 979d74fae5bc9455266ff58c41c59c40 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_2295 979d74fae5bc9455266ff58c41c59c40 240 Pfam PF00005 ABC transporter 17 165 1.1E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_2295 979d74fae5bc9455266ff58c41c59c40 240 PIRSF PIRSF039085 1 240 1.2E-115 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BAMF_2295 979d74fae5bc9455266ff58c41c59c40 240 Gene3D G3DSA:3.40.50.300 1 240 4.0E-82 T 12-10-2018 BAMF_1106 a8670938f58f77cb85e6b951a908b2f7 311 Pfam PF00762 Ferrochelatase 6 308 1.2E-84 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BAMF_1106 a8670938f58f77cb85e6b951a908b2f7 311 ProSitePatterns PS00534 Ferrochelatase signature. 179 197 - T 12-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BAMF_1106 a8670938f58f77cb85e6b951a908b2f7 311 Hamap MF_00323 Ferrochelatase [hemH]. 5 309 33.343 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BAMF_1106 a8670938f58f77cb85e6b951a908b2f7 311 TIGRFAM TIGR00109 hemH: ferrochelatase 3 309 3.4E-106 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BAMF_1106 a8670938f58f77cb85e6b951a908b2f7 311 Gene3D G3DSA:3.40.50.1400 9 305 4.1E-109 T 12-10-2018 BAMF_1106 a8670938f58f77cb85e6b951a908b2f7 311 Gene3D G3DSA:3.40.50.1400 149 290 4.1E-109 T 12-10-2018 BAMF_1106 a8670938f58f77cb85e6b951a908b2f7 311 SUPERFAMILY SSF53800 4 309 3.11E-91 T 12-10-2018 BAMF_1239 310c93750b72cf735f7d8e8365c7676f 236 SUPERFAMILY SSF48613 3 224 3.52E-68 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BAMF_1239 310c93750b72cf735f7d8e8365c7676f 236 Pfam PF03070 TENA/THI-4/PQQC family 11 214 3.7E-60 T 12-10-2018 IPR004305 Thiaminase-2/PQQC BAMF_1239 310c93750b72cf735f7d8e8365c7676f 236 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 11 215 1.5E-87 T 12-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 BAMF_1239 310c93750b72cf735f7d8e8365c7676f 236 Gene3D G3DSA:1.20.910.10 1 220 1.3E-63 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BAMF_3138 fb5e98423d9ae703f7931abd080eb2ff 154 PIRSF PIRSF005900 1 154 2.0E-48 T 12-10-2018 IPR002177 DNA-binding protein Dps BAMF_3138 fb5e98423d9ae703f7931abd080eb2ff 154 SUPERFAMILY SSF47240 13 153 9.45E-45 T 12-10-2018 IPR009078 Ferritin-like superfamily BAMF_3138 fb5e98423d9ae703f7931abd080eb2ff 154 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 130 148 2.1E-15 T 12-10-2018 IPR002177 DNA-binding protein Dps BAMF_3138 fb5e98423d9ae703f7931abd080eb2ff 154 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 35 51 2.1E-15 T 12-10-2018 IPR002177 DNA-binding protein Dps BAMF_3138 fb5e98423d9ae703f7931abd080eb2ff 154 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 59 75 2.1E-15 T 12-10-2018 IPR002177 DNA-binding protein Dps BAMF_3138 fb5e98423d9ae703f7931abd080eb2ff 154 Pfam PF00210 Ferritin-like domain 15 153 1.9E-32 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BAMF_3138 fb5e98423d9ae703f7931abd080eb2ff 154 Gene3D G3DSA:1.20.1260.10 1 153 3.9E-55 T 12-10-2018 IPR012347 Ferritin-like BAMF_3138 fb5e98423d9ae703f7931abd080eb2ff 154 ProSitePatterns PS00818 Dps protein family signature 1. 35 51 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 BAMF_0367 ae3b0ac2d13d00fe2bbe4cd5910cfdd7 143 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain BAMF_0367 ae3b0ac2d13d00fe2bbe4cd5910cfdd7 143 SUPERFAMILY SSF55804 2 141 1.96E-41 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BAMF_0367 ae3b0ac2d13d00fe2bbe4cd5910cfdd7 143 Gene3D G3DSA:3.40.930.10 1 141 5.2E-45 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BAMF_0367 ae3b0ac2d13d00fe2bbe4cd5910cfdd7 143 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 3 141 1.3E-37 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BAMF_0941 f7e42d343ee5e8cd328ea9048b977ecd 274 Pfam PF06152 Phage minor capsid protein 2 48 264 3.0E-16 T 12-10-2018 IPR009319 Bacteriophage A118, Gp4, minor capsid GO:0005198 BAMF_1212 a1f0e8810500f355a33854718250de9a 316 SUPERFAMILY SSF161098 90 303 6.02E-20 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1212 a1f0e8810500f355a33854718250de9a 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 315 2.8E-44 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_1212 a1f0e8810500f355a33854718250de9a 316 Gene3D G3DSA:1.10.3720.10 86 310 1.6E-24 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3272 7a091636145f1711c7cf0da7d16d4a46 558 Pfam PF02652 L-lactate permease 16 549 2.4E-209 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 BAMF_3272 7a091636145f1711c7cf0da7d16d4a46 558 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 15 549 1.6E-182 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 BAMF_3023 fab4c6588188986f0690ea0a3c055f74 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 4.6E-7 T 12-10-2018 BAMF_3023 fab4c6588188986f0690ea0a3c055f74 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.6E-7 T 12-10-2018 BAMF_3023 fab4c6588188986f0690ea0a3c055f74 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 225 239 4.6E-7 T 12-10-2018 BAMF_3023 fab4c6588188986f0690ea0a3c055f74 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 273 4.6E-7 T 12-10-2018 BAMF_3023 fab4c6588188986f0690ea0a3c055f74 355 Gene3D G3DSA:3.50.50.100 1 354 2.2E-79 T 12-10-2018 BAMF_3023 fab4c6588188986f0690ea0a3c055f74 355 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 287 5.8E-41 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BAMF_3023 fab4c6588188986f0690ea0a3c055f74 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 224 240 6.2E-8 T 12-10-2018 BAMF_3023 fab4c6588188986f0690ea0a3c055f74 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 6.2E-8 T 12-10-2018 BAMF_3023 fab4c6588188986f0690ea0a3c055f74 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 96 114 6.2E-8 T 12-10-2018 BAMF_3023 fab4c6588188986f0690ea0a3c055f74 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 251 273 6.2E-8 T 12-10-2018 BAMF_3023 fab4c6588188986f0690ea0a3c055f74 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 6.2E-8 T 12-10-2018 BAMF_3023 fab4c6588188986f0690ea0a3c055f74 355 SUPERFAMILY SSF51905 1 307 1.54E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_3756 7557ee25180f4bf67c1bcff278ca36dc 468 Pfam PF16369 C-terminal of Glycosyl hydrolases family 43 363 466 4.9E-33 T 12-10-2018 IPR032291 Extracellular endo-alpha-(1->5)-L-arabinanase, C-terminal BAMF_3756 7557ee25180f4bf67c1bcff278ca36dc 468 Pfam PF04616 Glycosyl hydrolases family 43 31 282 4.8E-30 T 12-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 BAMF_3756 7557ee25180f4bf67c1bcff278ca36dc 468 Gene3D G3DSA:2.40.128.10 376 468 1.0E-31 T 12-10-2018 BAMF_3756 7557ee25180f4bf67c1bcff278ca36dc 468 SUPERFAMILY SSF75005 18 359 2.71E-61 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BAMF_3756 7557ee25180f4bf67c1bcff278ca36dc 468 Gene3D G3DSA:2.115.10.20 38 362 4.1E-115 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BAMF_3789 3184968431018160487664b04c3d93bd 251 Pfam PF08220 DeoR-like helix-turn-helix domain 5 60 2.3E-21 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_3789 3184968431018160487664b04c3d93bd 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BAMF_3789 3184968431018160487664b04c3d93bd 251 SUPERFAMILY SSF100950 72 233 1.78E-32 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BAMF_3789 3184968431018160487664b04c3d93bd 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.0E-8 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_3789 3184968431018160487664b04c3d93bd 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.0E-8 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_3789 3184968431018160487664b04c3d93bd 251 Gene3D G3DSA:1.10.10.10 2 54 4.0E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3789 3184968431018160487664b04c3d93bd 251 SMART SM01134 71 232 1.9E-62 T 12-10-2018 BAMF_3789 3184968431018160487664b04c3d93bd 251 SMART SM00420 5 57 9.9E-23 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_3789 3184968431018160487664b04c3d93bd 251 SUPERFAMILY SSF46785 5 58 1.59E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3789 3184968431018160487664b04c3d93bd 251 Pfam PF00455 DeoR C terminal sensor domain 73 230 2.8E-51 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain BAMF_0474 703e5708837c41d366bcf0d76cf4b814 296 SUPERFAMILY SSF55136 128 290 8.11E-29 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BAMF_0474 703e5708837c41d366bcf0d76cf4b814 296 Gene3D G3DSA:1.10.10.60 58 117 5.8E-12 T 12-10-2018 BAMF_0474 703e5708837c41d366bcf0d76cf4b814 296 SUPERFAMILY SSF46689 57 115 4.03E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_0474 703e5708837c41d366bcf0d76cf4b814 296 Gene3D G3DSA:3.20.80.10 128 296 4.0E-39 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BAMF_0474 703e5708837c41d366bcf0d76cf4b814 296 SMART SM00871 128 288 9.5E-35 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding BAMF_0474 703e5708837c41d366bcf0d76cf4b814 296 SUPERFAMILY SSF46689 6 55 1.16E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_0474 703e5708837c41d366bcf0d76cf4b814 296 SMART SM00342 21 104 1.3E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BAMF_0474 703e5708837c41d366bcf0d76cf4b814 296 Pfam PF06445 GyrI-like small molecule binding domain 128 287 5.6E-30 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain BAMF_0474 703e5708837c41d366bcf0d76cf4b814 296 Pfam PF12833 Helix-turn-helix domain 28 103 3.6E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BAMF_0474 703e5708837c41d366bcf0d76cf4b814 296 Gene3D G3DSA:1.10.10.60 2 57 5.0E-15 T 12-10-2018 BAMF_2304 0bbf648b7e49dc055f4a648ffba048f4 369 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 182 199 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2304 0bbf648b7e49dc055f4a648ffba048f4 369 SUPERFAMILY SSF53067 120 350 2.09E-55 T 12-10-2018 BAMF_2304 0bbf648b7e49dc055f4a648ffba048f4 369 Pfam PF00871 Acetokinase family 8 356 3.3E-70 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2304 0bbf648b7e49dc055f4a648ffba048f4 369 PRINTS PR00471 Acetate kinase family signature 277 290 9.0E-14 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2304 0bbf648b7e49dc055f4a648ffba048f4 369 PRINTS PR00471 Acetate kinase family signature 300 316 9.0E-14 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2304 0bbf648b7e49dc055f4a648ffba048f4 369 PRINTS PR00471 Acetate kinase family signature 8 19 9.0E-14 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2304 0bbf648b7e49dc055f4a648ffba048f4 369 PRINTS PR00471 Acetate kinase family signature 182 203 9.0E-14 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_2304 0bbf648b7e49dc055f4a648ffba048f4 369 Hamap MF_00542 Probable butyrate kinase [buk]. 1 369 171.897 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 BAMF_2304 0bbf648b7e49dc055f4a648ffba048f4 369 Gene3D G3DSA:3.30.420.40 7 358 2.5E-158 T 12-10-2018 BAMF_2304 0bbf648b7e49dc055f4a648ffba048f4 369 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 7 357 2.2E-176 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 BAMF_2304 0bbf648b7e49dc055f4a648ffba048f4 369 Gene3D G3DSA:3.30.420.40 140 335 2.5E-158 T 12-10-2018 BAMF_2304 0bbf648b7e49dc055f4a648ffba048f4 369 SUPERFAMILY SSF53067 7 175 4.32E-73 T 12-10-2018 BAMF_2304 0bbf648b7e49dc055f4a648ffba048f4 369 PIRSF PIRSF036458 4 359 5.7E-175 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 BAMF_2304 0bbf648b7e49dc055f4a648ffba048f4 369 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 8 19 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BAMF_3538 ac5effa931979782caabc56352090126 356 Gene3D G3DSA:3.30.160.20 209 295 2.9E-95 T 12-10-2018 BAMF_3538 ac5effa931979782caabc56352090126 356 SMART SM00937 62 177 1.2E-62 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 BAMF_3538 ac5effa931979782caabc56352090126 356 Pfam PF00472 RF-1 domain 210 319 2.1E-40 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BAMF_3538 ac5effa931979782caabc56352090126 356 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 40.435 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BAMF_3538 ac5effa931979782caabc56352090126 356 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 354 5.1E-173 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BAMF_3538 ac5effa931979782caabc56352090126 356 Gene3D G3DSA:1.20.58.410 2 100 6.7E-9 T 12-10-2018 BAMF_3538 ac5effa931979782caabc56352090126 356 SUPERFAMILY SSF75620 8 351 4.19E-133 T 12-10-2018 BAMF_3538 ac5effa931979782caabc56352090126 356 Gene3D G3DSA:3.30.70.1660 110 340 2.9E-95 T 12-10-2018 BAMF_3538 ac5effa931979782caabc56352090126 356 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BAMF_3538 ac5effa931979782caabc56352090126 356 Pfam PF03462 PCRF domain 8 202 2.6E-74 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 BAMF_3825 8d29c90da73a16f9061c4296861eea49 641 SUPERFAMILY SSF56300 189 556 3.67E-9 T 12-10-2018 BAMF_3825 8d29c90da73a16f9061c4296861eea49 641 PIRSF PIRSF000906 1 641 0.0 T 12-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BAMF_3825 8d29c90da73a16f9061c4296861eea49 641 Hamap MF_01854 Fructose-1,6-bisphosphatase class 3 [fbp]. 2 641 39.219 T 12-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BAMF_3825 8d29c90da73a16f9061c4296861eea49 641 Pfam PF06874 Firmicute fructose-1,6-bisphosphatase 4 637 2.8E-284 T 12-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BAMF_0806 5fc926c3221f11c033e23450508f6602 194 SUPERFAMILY SSF55469 13 192 1.44E-36 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BAMF_0806 5fc926c3221f11c033e23450508f6602 194 PIRSF PIRSF000232 8 194 1.8E-46 T 12-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like BAMF_0806 5fc926c3221f11c033e23450508f6602 194 Gene3D G3DSA:3.40.109.10 5 193 4.8E-42 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BAMF_0806 5fc926c3221f11c033e23450508f6602 194 Pfam PF00881 Nitroreductase family 17 174 1.7E-24 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BAMF_3805 0f021e7ca2e0dd2897ac011569b33f85 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 8.4E-102 T 12-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BAMF_3805 0f021e7ca2e0dd2897ac011569b33f85 187 SUPERFAMILY SSF52833 1 187 2.05E-53 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_3805 0f021e7ca2e0dd2897ac011569b33f85 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 1.8E-4 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BAMF_3805 0f021e7ca2e0dd2897ac011569b33f85 187 PIRSF PIRSF000239 1 187 1.5E-48 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BAMF_3805 0f021e7ca2e0dd2897ac011569b33f85 187 Pfam PF00578 AhpC/TSA family 4 133 8.9E-32 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BAMF_3805 0f021e7ca2e0dd2897ac011569b33f85 187 Gene3D G3DSA:3.40.30.10 1 186 5.2E-57 T 12-10-2018 BAMF_2359 10355baefbd93e5e3c498e2f8c8d001b 448 Pfam PF02347 Glycine cleavage system P-protein 3 441 2.3E-170 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BAMF_2359 10355baefbd93e5e3c498e2f8c8d001b 448 PIRSF PIRSF006815 3 447 8.5E-189 T 12-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 BAMF_2359 10355baefbd93e5e3c498e2f8c8d001b 448 Gene3D G3DSA:3.40.640.10 84 349 4.5E-163 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_2359 10355baefbd93e5e3c498e2f8c8d001b 448 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 3 446 50.18 T 12-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 BAMF_2359 10355baefbd93e5e3c498e2f8c8d001b 448 SUPERFAMILY SSF53383 3 443 4.37E-122 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_2359 10355baefbd93e5e3c498e2f8c8d001b 448 Gene3D G3DSA:3.90.1150.10 73 441 4.5E-163 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_2499 654fe3b5d2ecc6f7065e2c5a90b0ff3e 92 TIGRFAM TIGR00616 rect: recombinase, phage RecT family 10 81 2.5E-28 T 12-10-2018 IPR004590 DNA single-strand annealing protein RecT GO:0003677|GO:0006259 BAMF_2499 654fe3b5d2ecc6f7065e2c5a90b0ff3e 92 Pfam PF03837 RecT family 11 80 2.2E-15 T 12-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 BAMF_0297 9a6c0b9d1622a31dee56291ed5976737 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 153 177 7.5E-19 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_0297 9a6c0b9d1622a31dee56291ed5976737 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 114 122 7.5E-19 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_0297 9a6c0b9d1622a31dee56291ed5976737 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 7.5E-19 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_0297 9a6c0b9d1622a31dee56291ed5976737 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 7.5E-19 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BAMF_0297 9a6c0b9d1622a31dee56291ed5976737 336 Gene3D G3DSA:3.50.50.60 7 306 2.2E-92 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0297 9a6c0b9d1622a31dee56291ed5976737 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 2.3E-19 T 12-10-2018 BAMF_0297 9a6c0b9d1622a31dee56291ed5976737 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 2.3E-19 T 12-10-2018 BAMF_0297 9a6c0b9d1622a31dee56291ed5976737 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 2.3E-19 T 12-10-2018 BAMF_0297 9a6c0b9d1622a31dee56291ed5976737 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 113 131 2.3E-19 T 12-10-2018 BAMF_0297 9a6c0b9d1622a31dee56291ed5976737 336 SUPERFAMILY SSF51905 4 316 1.3E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0297 9a6c0b9d1622a31dee56291ed5976737 336 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 294 6.4E-29 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BAMF_0297 9a6c0b9d1622a31dee56291ed5976737 336 Gene3D G3DSA:3.50.50.60 129 248 2.2E-92 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0297 9a6c0b9d1622a31dee56291ed5976737 336 Hamap MF_01685 Ferredoxin--NADP reductase. 7 330 40.331 T 12-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 BAMF_3883 ccc007a80aeee39a5f017995bd53db82 169 Gene3D G3DSA:1.20.120.450 3 165 7.6E-42 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BAMF_3883 ccc007a80aeee39a5f017995bd53db82 169 Pfam PF05163 DinB family 7 166 2.9E-40 T 12-10-2018 IPR007837 DNA damage-inducible protein DinB BAMF_3883 ccc007a80aeee39a5f017995bd53db82 169 SUPERFAMILY SSF109854 7 150 2.2E-29 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BAMF_0354 638654800a197157700c0cef689a89ec 248 PIRSF PIRSF005426 1 247 8.4E-91 T 12-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 BAMF_0354 638654800a197157700c0cef689a89ec 248 SUPERFAMILY SSF55469 1 246 2.22E-72 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BAMF_0354 638654800a197157700c0cef689a89ec 248 Pfam PF00881 Nitroreductase family 11 165 3.2E-21 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BAMF_0354 638654800a197157700c0cef689a89ec 248 Gene3D G3DSA:3.40.109.10 1 248 1.8E-82 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BAMF_1233 e76fb8369f22c5da4bf441e7e45da066 121 Hamap MF_01861 UPF0738 protein . 3 121 27.406 T 12-10-2018 IPR020908 Uncharacterised protein family UPF0738 BAMF_2986 695aa18402df7200463dd6286a21844e 79 SUPERFAMILY SSF54236 3 78 8.99E-5 T 12-10-2018 IPR029071 Ubiquitin-like domain superfamily BAMF_2986 695aa18402df7200463dd6286a21844e 79 PIRSF PIRSF037793 1 79 5.1E-32 T 12-10-2018 IPR014921 EsaB BAMF_2986 695aa18402df7200463dd6286a21844e 79 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 3 78 2.1E-13 T 12-10-2018 IPR024962 YukD-like BAMF_2986 695aa18402df7200463dd6286a21844e 79 Gene3D G3DSA:3.10.20.90 1 79 2.0E-41 T 12-10-2018 BAMF_3702 6442d79133c8fa0f55ca8e2452821630 466 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 365 373 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site BAMF_3702 6442d79133c8fa0f55ca8e2452821630 466 Gene3D G3DSA:3.20.20.80 8 465 3.3E-157 T 12-10-2018 BAMF_3702 6442d79133c8fa0f55ca8e2452821630 466 Pfam PF00232 Glycosyl hydrolase family 1 8 465 1.1E-138 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_3702 6442d79133c8fa0f55ca8e2452821630 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 9.7E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_3702 6442d79133c8fa0f55ca8e2452821630 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 9.7E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_3702 6442d79133c8fa0f55ca8e2452821630 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 434 446 9.7E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_3702 6442d79133c8fa0f55ca8e2452821630 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 293 307 9.7E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_3702 6442d79133c8fa0f55ca8e2452821630 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 365 373 9.7E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BAMF_3702 6442d79133c8fa0f55ca8e2452821630 466 SUPERFAMILY SSF51445 4 460 2.42E-165 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_2902 a60fc27529d99a5bdd09fe0e25008ae3 107 Gene3D G3DSA:2.40.10.270 1 106 1.4E-8 T 12-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily BAMF_2902 a60fc27529d99a5bdd09fe0e25008ae3 107 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 9 105 6.9E-12 T 12-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor BAMF_2902 a60fc27529d99a5bdd09fe0e25008ae3 107 Pfam PF05521 Phage head-tail joining protein 10 99 1.1E-11 T 12-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor BAMF_0677 5b33e6e9b3fafc988eaaf6fac74813a8 239 Gene3D G3DSA:3.30.70.980 83 234 3.8E-46 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_0677 5b33e6e9b3fafc988eaaf6fac74813a8 239 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 1.2E-70 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_0677 5b33e6e9b3fafc988eaaf6fac74813a8 239 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 31.513 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_0677 5b33e6e9b3fafc988eaaf6fac74813a8 239 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 57.327 T 12-10-2018 IPR026562 Probable transcriptional regulatory protein YeeN BAMF_0677 5b33e6e9b3fafc988eaaf6fac74813a8 239 Gene3D G3DSA:3.30.70.980 131 201 3.8E-46 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_0677 5b33e6e9b3fafc988eaaf6fac74813a8 239 SUPERFAMILY SSF75625 1 238 2.35E-80 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_0677 5b33e6e9b3fafc988eaaf6fac74813a8 239 Pfam PF01709 Transcriptional regulator 4 235 8.1E-81 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_0677 5b33e6e9b3fafc988eaaf6fac74813a8 239 Gene3D G3DSA:1.10.10.200 2 78 1.0E-23 T 12-10-2018 IPR017856 Integrase-like, N-terminal BAMF_3140 8d9c8a33e76abd8541c540c5eadf22e7 225 Gene3D G3DSA:3.40.50.2300 2 129 3.6E-31 T 12-10-2018 BAMF_3140 8d9c8a33e76abd8541c540c5eadf22e7 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 222 1.0E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_3140 8d9c8a33e76abd8541c540c5eadf22e7 225 SUPERFAMILY SSF46894 130 223 2.01E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_3140 8d9c8a33e76abd8541c540c5eadf22e7 225 SUPERFAMILY SSF52172 3 126 4.13E-32 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_3140 8d9c8a33e76abd8541c540c5eadf22e7 225 Gene3D G3DSA:1.10.10.10 130 225 2.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3140 8d9c8a33e76abd8541c540c5eadf22e7 225 SMART SM00862 151 222 1.7E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_3140 8d9c8a33e76abd8541c540c5eadf22e7 225 Pfam PF00072 Response regulator receiver domain 5 113 2.6E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3140 8d9c8a33e76abd8541c540c5eadf22e7 225 SMART SM00448 3 113 3.4E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2127 f58073994692469a2a8642fc9f577ee4 122 SUPERFAMILY SSF140415 2 121 5.89E-41 T 12-10-2018 IPR023351 YppE-like superfamily BAMF_2127 f58073994692469a2a8642fc9f577ee4 122 Pfam PF08807 Bacterial domain of unknown function (DUF1798) 10 117 4.9E-32 T 12-10-2018 IPR014913 Protein of unknown function DUF1798 BAMF_2127 f58073994692469a2a8642fc9f577ee4 122 Gene3D G3DSA:1.20.120.440 2 122 9.5E-40 T 12-10-2018 IPR023351 YppE-like superfamily BAMF_3135 efdac6c38605f79d8026c6bf0c6d9638 145 Pfam PF14039 YusW-like protein 46 134 1.1E-21 T 12-10-2018 IPR025623 YusW-like protein BAMF_0675 8e0bc3d929e0a0ea72c07778278d03da 407 Pfam PF13930 DNA/RNA non-specific endonuclease 264 392 2.6E-41 T 12-10-2018 BAMF_2439 6293d624256d717eae81f4d6de6e4a3f 308 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 307 4.8E-120 T 12-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 BAMF_2439 6293d624256d717eae81f4d6de6e4a3f 308 Pfam PF02690 Na+/Pi-cotransporter 13 146 8.4E-31 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 BAMF_2439 6293d624256d717eae81f4d6de6e4a3f 308 Pfam PF02690 Na+/Pi-cotransporter 160 254 7.3E-18 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 BAMF_2091 07e055366dcdb849576fa0ba470a89cb 301 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 298 44.266 T 12-10-2018 IPR033752 MetA family BAMF_2091 07e055366dcdb849576fa0ba470a89cb 301 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 37 288 7.0E-134 T 12-10-2018 BAMF_2091 07e055366dcdb849576fa0ba470a89cb 301 Gene3D G3DSA:3.40.50.880 1 300 9.4E-126 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_2091 07e055366dcdb849576fa0ba470a89cb 301 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 299 4.5E-132 T 12-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 BAMF_2091 07e055366dcdb849576fa0ba470a89cb 301 SUPERFAMILY SSF52317 17 296 7.08E-97 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_2091 07e055366dcdb849576fa0ba470a89cb 301 Pfam PF04204 Homoserine O-succinyltransferase 2 298 2.1E-137 T 12-10-2018 IPR033752 MetA family BAMF_2091 07e055366dcdb849576fa0ba470a89cb 301 PIRSF PIRSF000450 1 301 1.4E-147 T 12-10-2018 IPR033752 MetA family BAMF_2959 72df1c44c40a136c059974abc8d33627 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 4.9E-43 T 12-10-2018 BAMF_2959 72df1c44c40a136c059974abc8d33627 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 434 453 4.9E-43 T 12-10-2018 BAMF_2959 72df1c44c40a136c059974abc8d33627 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 309 321 4.9E-43 T 12-10-2018 BAMF_2959 72df1c44c40a136c059974abc8d33627 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 106 126 4.9E-43 T 12-10-2018 BAMF_2959 72df1c44c40a136c059974abc8d33627 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 4.9E-43 T 12-10-2018 BAMF_2959 72df1c44c40a136c059974abc8d33627 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 153 174 4.9E-43 T 12-10-2018 BAMF_2959 72df1c44c40a136c059974abc8d33627 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 241 267 4.9E-43 T 12-10-2018 BAMF_2959 72df1c44c40a136c059974abc8d33627 800 TIGRFAM TIGR00940 2a6301s01: monovalent cation:proton antiporter 4 794 0.0 T 12-10-2018 IPR005663 Monovalent cation proton antiporter subunit A GO:0015077|GO:0030004 BAMF_2959 72df1c44c40a136c059974abc8d33627 800 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 63 116 4.2E-10 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_2959 72df1c44c40a136c059974abc8d33627 800 Pfam PF00361 Proton-conducting membrane transporter 130 417 1.1E-67 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BAMF_2959 72df1c44c40a136c059974abc8d33627 800 Pfam PF13244 Domain of unknown function (DUF4040) 635 700 1.1E-21 T 12-10-2018 IPR025383 Domain of unknown function DUF4040 BAMF_2959 72df1c44c40a136c059974abc8d33627 800 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 79 99 3.0E-5 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BAMF_2959 72df1c44c40a136c059974abc8d33627 800 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 365 387 3.0E-5 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BAMF_2959 72df1c44c40a136c059974abc8d33627 800 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 259 281 3.0E-5 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BAMF_2454 e364d7f895ec3e345a72e78f82605b35 46 Pfam PF14141 YqzM-like protein 4 45 1.5E-23 T 12-10-2018 IPR025416 YqzM-like protein BAMF_3828 5cee56039b94cdc3c6434b2cfe42b3e8 776 Gene3D G3DSA:3.30.365.10 126 354 1.0E-58 T 12-10-2018 BAMF_3828 5cee56039b94cdc3c6434b2cfe42b3e8 776 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 156 704 2.8E-137 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 BAMF_3828 5cee56039b94cdc3c6434b2cfe42b3e8 776 Gene3D G3DSA:3.90.1170.50 1 121 2.8E-36 T 12-10-2018 BAMF_3828 5cee56039b94cdc3c6434b2cfe42b3e8 776 Gene3D G3DSA:3.30.365.10 190 285 1.0E-58 T 12-10-2018 BAMF_3828 5cee56039b94cdc3c6434b2cfe42b3e8 776 SUPERFAMILY SSF54665 3 142 2.36E-41 T 12-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily BAMF_3828 5cee56039b94cdc3c6434b2cfe42b3e8 776 Gene3D G3DSA:3.30.365.10 372 763 7.3E-98 T 12-10-2018 BAMF_3828 5cee56039b94cdc3c6434b2cfe42b3e8 776 Gene3D G3DSA:3.30.365.10 452 624 7.3E-98 T 12-10-2018 BAMF_3828 5cee56039b94cdc3c6434b2cfe42b3e8 776 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 18 121 3.8E-26 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead BAMF_3828 5cee56039b94cdc3c6434b2cfe42b3e8 776 SMART SM01008 18 121 2.8E-41 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead BAMF_3828 5cee56039b94cdc3c6434b2cfe42b3e8 776 SUPERFAMILY SSF56003 113 767 2.49E-162 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 BAMF_3158 eb56c0f790a9ec50fdb53faffc1ee4f1 348 Pfam PF01032 FecCD transport family 25 340 6.5E-89 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BAMF_3158 eb56c0f790a9ec50fdb53faffc1ee4f1 348 Gene3D G3DSA:1.10.3470.10 11 347 2.2E-96 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_3158 eb56c0f790a9ec50fdb53faffc1ee4f1 348 SUPERFAMILY SSF81345 9 340 1.03E-79 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_0795 201abd7d7a3ddb4b099ba8087a012f52 171 Gene3D G3DSA:1.10.357.140 32 167 1.3E-14 T 12-10-2018 BAMF_0795 201abd7d7a3ddb4b099ba8087a012f52 171 Pfam PF01040 UbiA prenyltransferase family 40 165 1.2E-24 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BAMF_0795 201abd7d7a3ddb4b099ba8087a012f52 171 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 82 104 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site BAMF_3493 4b4946e6b1bcd296bf4259cc2083fd52 384 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 12 362 3.9E-116 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_3493 4b4946e6b1bcd296bf4259cc2083fd52 384 Pfam PF01098 Cell cycle protein 12 365 5.5E-113 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_3493 4b4946e6b1bcd296bf4259cc2083fd52 384 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 322 346 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_1488 5c90958010c3dd82cf609b259a49e276 63 ProDom PD054279 YKZF 6 63 1.0E-23 T 12-10-2018 BAMF_1488 5c90958010c3dd82cf609b259a49e276 63 Pfam PF14156 Antirepressor AbbA 2 62 6.0E-32 T 12-10-2018 IPR025446 Antirepressor AbbA BAMF_3661 145f92fc1fac705659733ed3c8bab495 224 Gene3D G3DSA:3.90.550.10 6 223 3.9E-41 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3661 145f92fc1fac705659733ed3c8bab495 224 Pfam PF13712 Glycosyltransferase like family 8 218 2.4E-76 T 12-10-2018 BAMF_3244 2a9aaf57c544074d3896aa58e0b75541 226 Gene3D G3DSA:3.40.50.10320 1 225 9.0E-56 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 BAMF_3244 2a9aaf57c544074d3896aa58e0b75541 226 Pfam PF02585 GlcNAc-PI de-N-acetylase 5 131 5.5E-24 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 BAMF_3244 2a9aaf57c544074d3896aa58e0b75541 226 SUPERFAMILY SSF102588 1 224 4.19E-46 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 BAMF_1028 fc6935a8b7517bccb0345a4fad711e15 379 SMART SM00387 280 374 3.6E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_1028 fc6935a8b7517bccb0345a4fad711e15 379 Pfam PF13185 GAF domain 23 167 1.1E-15 T 12-10-2018 IPR003018 GAF domain GO:0005515 BAMF_1028 fc6935a8b7517bccb0345a4fad711e15 379 Gene3D G3DSA:3.30.450.40 2 180 9.9E-23 T 12-10-2018 IPR029016 GAF-like domain superfamily BAMF_1028 fc6935a8b7517bccb0345a4fad711e15 379 SMART SM00065 24 176 7.0E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 BAMF_1028 fc6935a8b7517bccb0345a4fad711e15 379 Gene3D G3DSA:3.30.565.10 242 373 2.5E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1028 fc6935a8b7517bccb0345a4fad711e15 379 Pfam PF07730 Histidine kinase 183 248 3.6E-18 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BAMF_1028 fc6935a8b7517bccb0345a4fad711e15 379 SUPERFAMILY SSF55781 29 171 3.27E-18 T 12-10-2018 BAMF_1028 fc6935a8b7517bccb0345a4fad711e15 379 SUPERFAMILY SSF55874 247 371 1.57E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3761 d63ed66589e96d866843d4ab47ed1126 316 ProSitePatterns PS01053 Arginase family signature. 239 260 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 BAMF_3761 d63ed66589e96d866843d4ab47ed1126 316 TIGRFAM TIGR01227 hutG: formimidoylglutamase 1 310 2.0E-109 T 12-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 BAMF_3761 d63ed66589e96d866843d4ab47ed1126 316 PIRSF PIRSF036979 34 316 2.7E-51 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BAMF_3761 d63ed66589e96d866843d4ab47ed1126 316 SUPERFAMILY SSF52768 37 312 3.06E-68 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily BAMF_3761 d63ed66589e96d866843d4ab47ed1126 316 Pfam PF00491 Arginase family 38 308 5.6E-63 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BAMF_3761 d63ed66589e96d866843d4ab47ed1126 316 PRINTS PR00116 Arginase signature 122 137 3.2E-6 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BAMF_3761 d63ed66589e96d866843d4ab47ed1126 316 PRINTS PR00116 Arginase signature 236 265 3.2E-6 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BAMF_3761 d63ed66589e96d866843d4ab47ed1126 316 Gene3D G3DSA:3.40.800.10 23 315 8.6E-95 T 12-10-2018 BAMF_3220 1cd25cd8c03f1fa8a0662bd70919702a 136 SMART SM00530 7 63 8.1E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_3220 1cd25cd8c03f1fa8a0662bd70919702a 136 Gene3D G3DSA:1.10.260.40 1 68 1.1E-18 T 12-10-2018 BAMF_3220 1cd25cd8c03f1fa8a0662bd70919702a 136 Pfam PF13560 Helix-turn-helix domain 4 62 1.2E-15 T 12-10-2018 BAMF_3220 1cd25cd8c03f1fa8a0662bd70919702a 136 SUPERFAMILY SSF47413 3 65 1.0E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_3602 3b2a8e1e3c80dfd10e6b2ce8c41d4cb9 399 SUPERFAMILY SSF53383 5 387 2.55E-104 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_3602 3b2a8e1e3c80dfd10e6b2ce8c41d4cb9 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BAMF_3602 3b2a8e1e3c80dfd10e6b2ce8c41d4cb9 399 Gene3D G3DSA:3.40.640.10 44 284 1.3E-115 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_3602 3b2a8e1e3c80dfd10e6b2ce8c41d4cb9 399 Pfam PF00155 Aminotransferase class I and II 34 382 5.6E-76 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_3602 3b2a8e1e3c80dfd10e6b2ce8c41d4cb9 399 Gene3D G3DSA:3.90.1150.10 26 384 1.3E-115 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_0032 70979b68894baaef03fdc64ffd9f329e 275 Pfam PF04468 PSP1 C-terminal conserved region 62 146 4.5E-33 T 12-10-2018 IPR007557 PSP1, C-terminal BAMF_1642 6ffb1e80c5ce442c13dfedf4e30f273b 406 Gene3D G3DSA:3.40.50.1950 1 186 4.8E-62 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BAMF_1642 6ffb1e80c5ce442c13dfedf4e30f273b 406 Pfam PF02441 Flavoprotein 5 177 1.4E-46 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BAMF_1642 6ffb1e80c5ce442c13dfedf4e30f273b 406 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 395 5.8E-158 T 12-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 BAMF_1642 6ffb1e80c5ce442c13dfedf4e30f273b 406 Gene3D G3DSA:3.40.50.10300 187 403 8.6E-81 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BAMF_1642 6ffb1e80c5ce442c13dfedf4e30f273b 406 SUPERFAMILY SSF102645 186 397 4.19E-72 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BAMF_1642 6ffb1e80c5ce442c13dfedf4e30f273b 406 SUPERFAMILY SSF52507 2 178 7.59E-62 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BAMF_1642 6ffb1e80c5ce442c13dfedf4e30f273b 406 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 369 1.7E-71 T 12-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BAMF_0882 1979ef79d8dd56350bab7c2d4c1935e9 117 ProDom PD355753 MEMBRANE TRANSMEMBRANE UPF0295 BLI00901/BL05075 BT9727_0449 GK0479 BCE0593 YGZB PRECURSOR BA0538/GBAA0538/BAS0506 1 113 5.0E-56 T 12-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 BAMF_0882 1979ef79d8dd56350bab7c2d4c1935e9 117 Pfam PF11023 Zinc-ribbon containing domain 3 113 2.9E-59 T 12-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 BAMF_0882 1979ef79d8dd56350bab7c2d4c1935e9 117 Hamap MF_01502 UPF0295 protein . 1 115 36.555 T 12-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 BAMF_2149 957af4589e1a64e6dd10fc1a283e2d8f 267 SUPERFAMILY SSF51735 4 156 1.26E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2149 957af4589e1a64e6dd10fc1a283e2d8f 267 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 12-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BAMF_2149 957af4589e1a64e6dd10fc1a283e2d8f 267 Gene3D G3DSA:3.40.50.720 7 264 1.7E-77 T 12-10-2018 BAMF_2149 957af4589e1a64e6dd10fc1a283e2d8f 267 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 265 6.9E-33 T 12-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BAMF_2149 957af4589e1a64e6dd10fc1a283e2d8f 267 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 267 1.8E-95 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BAMF_2149 957af4589e1a64e6dd10fc1a283e2d8f 267 SUPERFAMILY SSF55347 130 238 1.05E-37 T 12-10-2018 BAMF_2149 957af4589e1a64e6dd10fc1a283e2d8f 267 PIRSF PIRSF000161 4 267 3.7E-71 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BAMF_2149 957af4589e1a64e6dd10fc1a283e2d8f 267 Gene3D G3DSA:3.30.360.10 131 236 1.7E-77 T 12-10-2018 BAMF_2149 957af4589e1a64e6dd10fc1a283e2d8f 267 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 1.2E-31 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BAMF_2149 957af4589e1a64e6dd10fc1a283e2d8f 267 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 267 30.499 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BAMF_3587 cf38bc6c17fd88bf16387d960e520378 104 Gene3D G3DSA:1.10.10.10 1 103 4.8E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3587 cf38bc6c17fd88bf16387d960e520378 104 SUPERFAMILY SSF46785 10 100 5.25E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3587 cf38bc6c17fd88bf16387d960e520378 104 Pfam PF03551 Transcriptional regulator PadR-like family 14 79 1.5E-18 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal BAMF_3795 2fd57eac52a9896df66694fadb454d45 378 SUPERFAMILY SSF55874 250 366 1.86E-10 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3795 2fd57eac52a9896df66694fadb454d45 378 Pfam PF07730 Histidine kinase 178 241 3.7E-21 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BAMF_3795 2fd57eac52a9896df66694fadb454d45 378 Gene3D G3DSA:3.30.565.10 242 370 2.2E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_1173 02097f727099549be450d4ac3c8bbc49 208 Gene3D G3DSA:2.160.20.100 1 208 1.1E-48 T 12-10-2018 BAMF_1173 02097f727099549be450d4ac3c8bbc49 208 SUPERFAMILY SSF141571 40 207 1.14E-39 T 12-10-2018 BAMF_1173 02097f727099549be450d4ac3c8bbc49 208 Pfam PF13599 Pentapeptide repeats (9 copies) 74 146 8.8E-12 T 12-10-2018 IPR001646 Pentapeptide repeat BAMF_0422 e3650022a6c03216a10a0e983440092f 223 Pfam PF04703 FaeA-like protein 161 204 2.3E-6 T 12-10-2018 IPR006793 FaeA-like protein GO:0006355|GO:0009289 BAMF_0422 e3650022a6c03216a10a0e983440092f 223 Gene3D G3DSA:1.10.10.10 160 211 3.2E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0422 e3650022a6c03216a10a0e983440092f 223 SUPERFAMILY SSF52172 3 170 2.56E-36 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_0422 e3650022a6c03216a10a0e983440092f 223 SUPERFAMILY SSF46785 162 207 2.43E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0422 e3650022a6c03216a10a0e983440092f 223 SMART SM00448 3 116 8.3E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0422 e3650022a6c03216a10a0e983440092f 223 Pfam PF00072 Response regulator receiver domain 5 116 4.2E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_0422 e3650022a6c03216a10a0e983440092f 223 Gene3D G3DSA:3.40.50.2300 2 140 7.3E-35 T 12-10-2018 BAMF_0422 e3650022a6c03216a10a0e983440092f 223 PIRSF PIRSF006171 1 223 6.0E-82 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 BAMF_0422 e3650022a6c03216a10a0e983440092f 223 ProDom PD007170 TRANSCRIPTION REGULATORY REGULATION FIMBRIA FIMBRIAL PLASMID ACTIVATOR PAPI OPERON PEFI 161 204 9.0E-4 T 12-10-2018 IPR006793 FaeA-like protein GO:0006355|GO:0009289 BAMF_3224 84caf2e7045f706f3eabbcc920e13d60 220 SUPERFAMILY SSF52172 3 178 9.53E-35 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_3224 84caf2e7045f706f3eabbcc920e13d60 220 Gene3D G3DSA:1.10.10.10 129 220 6.2E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3224 84caf2e7045f706f3eabbcc920e13d60 220 Gene3D G3DSA:3.40.50.2300 2 128 2.5E-33 T 12-10-2018 BAMF_3224 84caf2e7045f706f3eabbcc920e13d60 220 SMART SM00862 145 219 1.6E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_3224 84caf2e7045f706f3eabbcc920e13d60 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 7.7E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_3224 84caf2e7045f706f3eabbcc920e13d60 220 SMART SM00448 2 111 1.2E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_3224 84caf2e7045f706f3eabbcc920e13d60 220 Pfam PF00072 Response regulator receiver domain 4 112 2.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2745 23bd06387b6ba4fce8f614443748c25e 335 SUPERFAMILY SSF52096 52 268 2.09E-43 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_2745 23bd06387b6ba4fce8f614443748c25e 335 Gene3D G3DSA:3.40.1750.20 171 237 4.1E-91 T 12-10-2018 BAMF_2745 23bd06387b6ba4fce8f614443748c25e 335 Gene3D G3DSA:3.90.226.10 61 276 4.1E-91 T 12-10-2018 BAMF_2745 23bd06387b6ba4fce8f614443748c25e 335 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 59 280 3.1E-89 T 12-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 BAMF_2745 23bd06387b6ba4fce8f614443748c25e 335 Pfam PF01343 Peptidase family S49 131 280 1.9E-59 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BAMF_1085 0668b07f157eb4a52e03422d862c9e14 314 Hamap MF_01427 3'-5' exoribonuclease YhaM [yhaM]. 1 313 64.886 T 12-10-2018 IPR020873 3'-5' exoribonuclease YhaM GO:0000175 BAMF_1085 0668b07f157eb4a52e03422d862c9e14 314 Gene3D G3DSA:2.40.50.140 24 103 5.7E-6 T 12-10-2018 BAMF_1085 0668b07f157eb4a52e03422d862c9e14 314 SUPERFAMILY SSF109604 147 280 1.66E-17 T 12-10-2018 BAMF_1085 0668b07f157eb4a52e03422d862c9e14 314 Pfam PF01966 HD domain 161 278 6.6E-13 T 12-10-2018 IPR006674 HD domain BAMF_1085 0668b07f157eb4a52e03422d862c9e14 314 SMART SM00471 156 288 6.6E-7 T 12-10-2018 IPR003607 HD/PDEase domain BAMF_1085 0668b07f157eb4a52e03422d862c9e14 314 Gene3D G3DSA:1.10.3210.10 122 298 9.5E-14 T 12-10-2018 BAMF_0869 866274f970c2f5c235472fe7f2d1b9bd 255 SUPERFAMILY SSF48452 110 244 1.57E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_0869 866274f970c2f5c235472fe7f2d1b9bd 255 Gene3D G3DSA:1.25.40.10 1 252 9.5E-69 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_0869 866274f970c2f5c235472fe7f2d1b9bd 255 SMART SM00028 134 167 130.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0869 866274f970c2f5c235472fe7f2d1b9bd 255 SMART SM00028 215 248 75.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0869 866274f970c2f5c235472fe7f2d1b9bd 255 SMART SM00028 175 208 18.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0869 866274f970c2f5c235472fe7f2d1b9bd 255 Pfam PF13424 Tetratricopeptide repeat 180 245 2.1E-9 T 12-10-2018 BAMF_1223 e04b3a760d397a92c7866b5299d3bf82 131 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 39.7 T 12-10-2018 IPR023731 Regulatory protein Spx GO:0045892 BAMF_1223 e04b3a760d397a92c7866b5299d3bf82 131 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 8.9E-37 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR BAMF_1223 e04b3a760d397a92c7866b5299d3bf82 131 SUPERFAMILY SSF52833 1 128 4.99E-40 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_1223 e04b3a760d397a92c7866b5299d3bf82 131 Gene3D G3DSA:3.40.30.10 1 131 1.6E-47 T 12-10-2018 BAMF_1223 e04b3a760d397a92c7866b5299d3bf82 131 Pfam PF03960 ArsC family 5 113 1.3E-23 T 12-10-2018 IPR006660 Arsenate reductase-like BAMF_3889 d11060c1f4f65c478f436dce03e3f18f 150 SUPERFAMILY SSF46785 4 143 1.17E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3889 d11060c1f4f65c478f436dce03e3f18f 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 1.7E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3889 d11060c1f4f65c478f436dce03e3f18f 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 1.7E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3889 d11060c1f4f65c478f436dce03e3f18f 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 1.7E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3889 d11060c1f4f65c478f436dce03e3f18f 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 1.7E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3889 d11060c1f4f65c478f436dce03e3f18f 150 Pfam PF01047 MarR family 28 85 3.0E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3889 d11060c1f4f65c478f436dce03e3f18f 150 SMART SM00347 21 121 1.5E-25 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3889 d11060c1f4f65c478f436dce03e3f18f 150 Gene3D G3DSA:1.10.10.10 2 145 4.0E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3889 d11060c1f4f65c478f436dce03e3f18f 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BAMF_0473 96710fdb34fa165eb4e900a184d5b5f1 173 PRINTS PR01754 Streptothricin acetyltransferase signature 160 173 1.5E-23 T 12-10-2018 IPR008125 Streptothricin acetyltransferase BAMF_0473 96710fdb34fa165eb4e900a184d5b5f1 173 PRINTS PR01754 Streptothricin acetyltransferase signature 93 108 1.5E-23 T 12-10-2018 IPR008125 Streptothricin acetyltransferase BAMF_0473 96710fdb34fa165eb4e900a184d5b5f1 173 PRINTS PR01754 Streptothricin acetyltransferase signature 117 132 1.5E-23 T 12-10-2018 IPR008125 Streptothricin acetyltransferase BAMF_0473 96710fdb34fa165eb4e900a184d5b5f1 173 PRINTS PR01754 Streptothricin acetyltransferase signature 138 154 1.5E-23 T 12-10-2018 IPR008125 Streptothricin acetyltransferase BAMF_0473 96710fdb34fa165eb4e900a184d5b5f1 173 Gene3D G3DSA:3.40.630.30 1 173 9.8E-33 T 12-10-2018 BAMF_0473 96710fdb34fa165eb4e900a184d5b5f1 173 SUPERFAMILY SSF55729 29 156 2.78E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_0473 96710fdb34fa165eb4e900a184d5b5f1 173 Pfam PF00583 Acetyltransferase (GNAT) family 41 146 2.6E-19 T 12-10-2018 IPR000182 GNAT domain BAMF_0671 7bcf148a9d68ab882b073380f435f4fb 291 PIRSF PIRSF006648 2 291 8.5E-16 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BAMF_0671 7bcf148a9d68ab882b073380f435f4fb 291 Pfam PF01061 ABC-2 type transporter 5 227 1.5E-18 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 BAMF_1043 c191a8c3b3e8d677543dbac4e9590d72 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 14 35 7.1E-12 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BAMF_1043 c191a8c3b3e8d677543dbac4e9590d72 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 89 115 7.1E-12 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BAMF_1043 c191a8c3b3e8d677543dbac4e9590d72 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 43 62 7.1E-12 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BAMF_1043 c191a8c3b3e8d677543dbac4e9590d72 451 Pfam PF00209 Sodium:neurotransmitter symporter family 6 124 6.0E-24 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BAMF_1043 c191a8c3b3e8d677543dbac4e9590d72 451 Pfam PF00209 Sodium:neurotransmitter symporter family 148 443 1.9E-26 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BAMF_1043 c191a8c3b3e8d677543dbac4e9590d72 451 SUPERFAMILY SSF161070 6 445 6.02E-127 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 BAMF_1043 c191a8c3b3e8d677543dbac4e9590d72 451 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 30 44 - T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BAMF_2709 1bf6224931456c0f8a530fa380371f5e 197 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 195 28.647 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BAMF_2709 1bf6224931456c0f8a530fa380371f5e 197 Pfam PF01121 Dephospho-CoA kinase 3 182 1.5E-62 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BAMF_2709 1bf6224931456c0f8a530fa380371f5e 197 SUPERFAMILY SSF52540 4 194 1.81E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2709 1bf6224931456c0f8a530fa380371f5e 197 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 191 1.6E-68 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BAMF_2709 1bf6224931456c0f8a530fa380371f5e 197 Gene3D G3DSA:3.40.50.300 2 197 4.2E-80 T 12-10-2018 BAMF_0708 5d20f9fa081bc1bcbd7f67ab8c05ac58 629 SUPERFAMILY SSF52540 313 527 1.16E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0708 5d20f9fa081bc1bcbd7f67ab8c05ac58 629 Pfam PF12848 ABC transporter 226 299 6.0E-13 T 12-10-2018 IPR032781 ABC-transporter extension domain BAMF_0708 5d20f9fa081bc1bcbd7f67ab8c05ac58 629 Gene3D G3DSA:3.40.50.300 2 281 6.5E-71 T 12-10-2018 BAMF_0708 5d20f9fa081bc1bcbd7f67ab8c05ac58 629 Gene3D G3DSA:3.40.50.300 283 556 9.5E-64 T 12-10-2018 BAMF_0708 5d20f9fa081bc1bcbd7f67ab8c05ac58 629 Pfam PF00005 ABC transporter 341 469 7.3E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0708 5d20f9fa081bc1bcbd7f67ab8c05ac58 629 Pfam PF00005 ABC transporter 20 187 2.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0708 5d20f9fa081bc1bcbd7f67ab8c05ac58 629 Pfam PF16326 ABC transporter C-terminal domain 556 621 4.7E-17 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 BAMF_0708 5d20f9fa081bc1bcbd7f67ab8c05ac58 629 SUPERFAMILY SSF52540 4 240 1.84E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0708 5d20f9fa081bc1bcbd7f67ab8c05ac58 629 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0708 5d20f9fa081bc1bcbd7f67ab8c05ac58 629 SMART SM00382 343 514 5.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0708 5d20f9fa081bc1bcbd7f67ab8c05ac58 629 SMART SM00382 28 232 6.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2637 d1c85e107611e1c70eaed6648b9668f2 172 SUPERFAMILY SSF55021 80 160 3.97E-25 T 12-10-2018 BAMF_2637 d1c85e107611e1c70eaed6648b9668f2 172 Gene3D G3DSA:3.30.70.260 1 80 1.4E-29 T 12-10-2018 BAMF_2637 d1c85e107611e1c70eaed6648b9668f2 172 SUPERFAMILY SSF55021 2 77 2.12E-19 T 12-10-2018 BAMF_2637 d1c85e107611e1c70eaed6648b9668f2 172 Pfam PF01842 ACT domain 4 68 1.1E-15 T 12-10-2018 IPR002912 ACT domain BAMF_2637 d1c85e107611e1c70eaed6648b9668f2 172 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 77 8.0E-37 T 12-10-2018 BAMF_2637 d1c85e107611e1c70eaed6648b9668f2 172 Gene3D G3DSA:3.30.70.1150 84 165 1.8E-28 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal BAMF_2637 d1c85e107611e1c70eaed6648b9668f2 172 Pfam PF10369 Small subunit of acetolactate synthase 85 158 2.0E-28 T 12-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BAMF_2637 d1c85e107611e1c70eaed6648b9668f2 172 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 2 158 2.7E-66 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BAMF_3457 cabef5a065500a25e2eece83206ba2d9 178 Pfam PF02417 Chromate transporter 6 170 2.2E-36 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 BAMF_0547 0be5476e0df2e06ccb9e82ec00c781df 85 ProDom PD061343 YQAH DNA SEQUENCE 1 82 4.0E-31 T 12-10-2018 IPR020278 Uncharacterized protein YqaH BAMF_0547 0be5476e0df2e06ccb9e82ec00c781df 85 Pfam PF17448 Uncharacterized protein YqaH 1 83 5.0E-33 T 12-10-2018 IPR020278 Uncharacterized protein YqaH BAMF_0045 4ee69a25a4fe2db0549cc1271924d4f4 62 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 13 22 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 BAMF_0045 4ee69a25a4fe2db0549cc1271924d4f4 62 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 10 54 2.7E-7 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 BAMF_0045 4ee69a25a4fe2db0549cc1271924d4f4 62 Gene3D G3DSA:1.10.8.910 6 62 1.0E-5 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily BAMF_2505 85be2655bf8cdbd4934de85bfade8804 178 SUPERFAMILY SSF52540 4 176 2.42E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2505 85be2655bf8cdbd4934de85bfade8804 178 Pfam PF13238 AAA domain 5 103 1.7E-8 T 12-10-2018 BAMF_2505 85be2655bf8cdbd4934de85bfade8804 178 Gene3D G3DSA:3.40.50.300 1 178 3.0E-16 T 12-10-2018 BAMF_1552 ec2f9eb9bd8ad64d9e3ec1243a272903 106 Pfam PF14036 YlaH-like protein 20 94 1.8E-29 T 12-10-2018 IPR025620 YlaH-like protein BAMF_0386 8a0d46152250a8599fef7aa652d0c405 167 Gene3D G3DSA:2.60.120.10 1 167 5.4E-67 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_0386 8a0d46152250a8599fef7aa652d0c405 167 SUPERFAMILY SSF51182 45 158 5.48E-10 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BAMF_0386 8a0d46152250a8599fef7aa652d0c405 167 Pfam PF07385 D-lyxose isomerase 29 160 9.2E-6 T 12-10-2018 IPR010864 D-lyxose isomerase KEGG: 00040+5.3.1.15 BAMF_0052 490458e048c2ab3d8af873083e4dd148 202 Gene3D G3DSA:2.170.120.20 95 187 2.9E-28 T 12-10-2018 IPR037121 Ribosomal protein L25, C-terminal BAMF_0052 490458e048c2ab3d8af873083e4dd148 202 SUPERFAMILY SSF50715 2 187 1.64E-55 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BAMF_0052 490458e048c2ab3d8af873083e4dd148 202 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 181 1.1E-27 T 12-10-2018 IPR020057 Ribosomal protein L25, beta domain BAMF_0052 490458e048c2ab3d8af873083e4dd148 202 Pfam PF01386 Ribosomal L25p family 4 90 5.4E-22 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BAMF_0052 490458e048c2ab3d8af873083e4dd148 202 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 4 91 2.0E-34 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BAMF_0052 490458e048c2ab3d8af873083e4dd148 202 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 2 181 26.483 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 BAMF_0052 490458e048c2ab3d8af873083e4dd148 202 Gene3D G3DSA:2.40.240.10 1 93 3.8E-25 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BAMF_0052 490458e048c2ab3d8af873083e4dd148 202 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 4 178 1.3E-61 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 BAMF_0842 8165c91c5da1ccef8c7e1840c98e8f60 61 Gene3D G3DSA:3.30.920.30 1 60 2.6E-33 T 12-10-2018 IPR038570 HicA superfamily BAMF_0842 8165c91c5da1ccef8c7e1840c98e8f60 61 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 60 4.9E-26 T 12-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 BAMF_0842 8165c91c5da1ccef8c7e1840c98e8f60 61 SUPERFAMILY SSF54786 3 61 6.67E-21 T 12-10-2018 BAMF_2028 9133221839f7c1b5f364b06c67f32762 307 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 263 4.0E-30 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BAMF_2028 9133221839f7c1b5f364b06c67f32762 307 Gene3D G3DSA:3.10.180.10 5 298 1.5E-107 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_2028 9133221839f7c1b5f364b06c67f32762 307 SUPERFAMILY SSF54593 1 278 7.58E-44 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_2028 9133221839f7c1b5f364b06c67f32762 307 Gene3D G3DSA:3.10.180.10 65 208 1.5E-107 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_0511 a661e3b0ddf663cd2a57ff8d094b0f71 252 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 80 224 1.4E-17 T 12-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 BAMF_0511 a661e3b0ddf663cd2a57ff8d094b0f71 252 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 10 231 1.6E-70 T 12-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 BAMF_0511 a661e3b0ddf663cd2a57ff8d094b0f71 252 Gene3D G3DSA:3.40.50.2000 10 232 2.5E-75 T 12-10-2018 BAMF_0511 a661e3b0ddf663cd2a57ff8d094b0f71 252 SUPERFAMILY SSF53756 9 246 6.98E-50 T 12-10-2018 BAMF_0511 a661e3b0ddf663cd2a57ff8d094b0f71 252 Gene3D G3DSA:3.40.50.2000 68 231 2.5E-75 T 12-10-2018 BAMF_0505 2d0845e797f1c5a3ba7340ab3073fa5b 290 SUPERFAMILY SSF103481 46 142 3.14E-14 T 12-10-2018 BAMF_0505 2d0845e797f1c5a3ba7340ab3073fa5b 290 Pfam PF00892 EamA-like transporter family 6 139 6.3E-24 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BAMF_0505 2d0845e797f1c5a3ba7340ab3073fa5b 290 Pfam PF00892 EamA-like transporter family 151 287 1.6E-25 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BAMF_0505 2d0845e797f1c5a3ba7340ab3073fa5b 290 SUPERFAMILY SSF103481 188 287 5.36E-17 T 12-10-2018 BAMF_0831 e276a7935db22fdae04a3eda1231298c 215 Pfam PF10552 ORF6C domain 113 213 1.9E-20 T 12-10-2018 IPR018878 ORF6C domain BAMF_0831 e276a7935db22fdae04a3eda1231298c 215 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 15 104 1.2E-24 T 12-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family BAMF_0831 e276a7935db22fdae04a3eda1231298c 215 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 8 108 2.0E-16 T 12-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family BAMF_0316 d5d73b4acb04c04da6a2bfcce68bbc47 436 SUPERFAMILY SSF53383 22 419 8.29E-59 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_0316 d5d73b4acb04c04da6a2bfcce68bbc47 436 Pfam PF00155 Aminotransferase class I and II 75 421 2.7E-27 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_0316 d5d73b4acb04c04da6a2bfcce68bbc47 436 Gene3D G3DSA:3.40.640.10 1 323 9.3E-75 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_0316 d5d73b4acb04c04da6a2bfcce68bbc47 436 Gene3D G3DSA:3.90.1150.10 324 428 5.7E-36 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1410 c2b265664e21bd650e8e554272c5126e 253 Pfam PF02361 Cobalt transport protein 7 220 9.5E-41 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component BAMF_2787 5ffd6afe54a7a7d0524deb9ff40b1d5a 405 SMART SM00919 113 374 8.7E-128 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BAMF_2787 5ffd6afe54a7a7d0524deb9ff40b1d5a 405 SUPERFAMILY SSF53223 1 112 2.81E-46 T 12-10-2018 BAMF_2787 5ffd6afe54a7a7d0524deb9ff40b1d5a 405 Gene3D G3DSA:3.40.50.720 111 405 1.4E-108 T 12-10-2018 BAMF_2787 5ffd6afe54a7a7d0524deb9ff40b1d5a 405 Pfam PF03949 Malic enzyme, NAD binding domain 113 374 1.0E-105 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BAMF_2787 5ffd6afe54a7a7d0524deb9ff40b1d5a 405 Pfam PF00390 Malic enzyme, N-terminal domain 1 103 2.2E-40 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BAMF_2787 5ffd6afe54a7a7d0524deb9ff40b1d5a 405 PIRSF PIRSF000106 1 405 2.1E-162 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_2787 5ffd6afe54a7a7d0524deb9ff40b1d5a 405 PRINTS PR00072 Malic enzyme signature 252 268 1.9E-37 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_2787 5ffd6afe54a7a7d0524deb9ff40b1d5a 405 PRINTS PR00072 Malic enzyme signature 109 125 1.9E-37 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_2787 5ffd6afe54a7a7d0524deb9ff40b1d5a 405 PRINTS PR00072 Malic enzyme signature 140 156 1.9E-37 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_2787 5ffd6afe54a7a7d0524deb9ff40b1d5a 405 PRINTS PR00072 Malic enzyme signature 84 102 1.9E-37 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_2787 5ffd6afe54a7a7d0524deb9ff40b1d5a 405 PRINTS PR00072 Malic enzyme signature 25 47 1.9E-37 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_2787 5ffd6afe54a7a7d0524deb9ff40b1d5a 405 SMART SM01274 1 103 5.7E-24 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BAMF_2787 5ffd6afe54a7a7d0524deb9ff40b1d5a 405 SUPERFAMILY SSF51735 113 404 4.6E-94 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2787 5ffd6afe54a7a7d0524deb9ff40b1d5a 405 ProSitePatterns PS00331 Malic enzymes signature. 109 125 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 BAMF_2787 5ffd6afe54a7a7d0524deb9ff40b1d5a 405 Gene3D G3DSA:3.40.50.10380 1 110 3.1E-47 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 BAMF_3077 192db7d28ff7e491085fc562200667ca 1248 SUPERFAMILY SSF53955 1022 1111 4.38E-13 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BAMF_3077 192db7d28ff7e491085fc562200667ca 1248 Pfam PF10145 Phage-related minor tail protein 232 424 1.3E-20 T 12-10-2018 IPR010090 Phage tail tape measure protein BAMF_3077 192db7d28ff7e491085fc562200667ca 1248 Gene3D G3DSA:1.10.530.10 1017 1123 7.5E-10 T 12-10-2018 BAMF_3077 192db7d28ff7e491085fc562200667ca 1248 Pfam PF01464 Transglycosylase SLT domain 1042 1147 7.3E-15 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 BAMF_0030 4999274fb2d1c04747b1a6a6298c9e6d 146 Pfam PF03885 Protein of unknown function (DUF327) 13 145 1.5E-37 T 12-10-2018 IPR005585 Protein of unknown function DUF327 BAMF_0030 4999274fb2d1c04747b1a6a6298c9e6d 146 SUPERFAMILY SSF158397 28 146 5.62E-33 T 12-10-2018 IPR024042 TM1646-like domain superfamily BAMF_0030 4999274fb2d1c04747b1a6a6298c9e6d 146 Gene3D G3DSA:1.20.120.490 25 146 5.1E-36 T 12-10-2018 IPR024042 TM1646-like domain superfamily BAMF_2408 c02a54ff8f0a98f961d2ad860cfff05f 136 Pfam PF01475 Ferric uptake regulator family 12 129 3.1E-29 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BAMF_2408 c02a54ff8f0a98f961d2ad860cfff05f 136 Gene3D G3DSA:1.10.10.10 1 83 6.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2408 c02a54ff8f0a98f961d2ad860cfff05f 136 Gene3D G3DSA:3.30.1490.190 85 136 1.9E-14 T 12-10-2018 BAMF_2408 c02a54ff8f0a98f961d2ad860cfff05f 136 SUPERFAMILY SSF46785 5 133 3.74E-34 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0470 75f24a21658d3231ae0aa8c88d6ec32d 311 Pfam PF16916 Dimerisation domain of Zinc Transporter 216 286 6.5E-7 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain BAMF_0470 75f24a21658d3231ae0aa8c88d6ec32d 311 Gene3D G3DSA:1.20.1510.10 10 207 4.8E-49 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BAMF_0470 75f24a21658d3231ae0aa8c88d6ec32d 311 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 288 1.8E-95 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BAMF_0470 75f24a21658d3231ae0aa8c88d6ec32d 311 Gene3D G3DSA:3.30.70.1350 209 289 1.3E-6 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BAMF_0470 75f24a21658d3231ae0aa8c88d6ec32d 311 SUPERFAMILY SSF160240 212 287 1.83E-13 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BAMF_0470 75f24a21658d3231ae0aa8c88d6ec32d 311 Pfam PF01545 Cation efflux family 14 207 2.6E-49 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BAMF_0470 75f24a21658d3231ae0aa8c88d6ec32d 311 SUPERFAMILY SSF161111 9 208 4.45E-60 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BAMF_1420 4ba00d8301b55d068e67374d8ad7d87d 184 ProDom PD102989 YKOP PLASMID 1 180 7.0E-67 T 12-10-2018 BAMF_0088 9ad945c0d76d01cc7a5e2cee4ded7f91 366 Gene3D G3DSA:3.40.50.1010 162 297 1.2E-52 T 12-10-2018 BAMF_0088 9ad945c0d76d01cc7a5e2cee4ded7f91 366 SUPERFAMILY SSF88723 167 294 2.59E-23 T 12-10-2018 IPR029060 PIN-like domain superfamily BAMF_0088 9ad945c0d76d01cc7a5e2cee4ded7f91 366 SMART SM00670 166 273 1.5E-14 T 12-10-2018 IPR002716 PIN domain BAMF_0033 93afea485b7395231a3353ddd2d7f067 119 PIRSF PIRSF021439 1 119 1.2E-39 T 12-10-2018 IPR010377 Initiation control protein YabA GO:0006260 BAMF_0033 93afea485b7395231a3353ddd2d7f067 119 Pfam PF06156 Initiation control protein YabA 1 114 1.4E-37 T 12-10-2018 IPR010377 Initiation control protein YabA GO:0006260 BAMF_0033 93afea485b7395231a3353ddd2d7f067 119 Hamap MF_01159 Initiation-control protein YabA. 1 118 24.478 T 12-10-2018 IPR010377 Initiation control protein YabA GO:0006260 BAMF_2665 55625682b21ac732342dfac703d4d898 582 Gene3D G3DSA:3.20.20.140 336 582 4.2E-75 T 12-10-2018 BAMF_2665 55625682b21ac732342dfac703d4d898 582 Gene3D G3DSA:3.30.210.10 271 335 1.1E-16 T 12-10-2018 IPR037160 DNA polymerase, thumb domain superfamily BAMF_2665 55625682b21ac732342dfac703d4d898 582 Pfam PF14716 Helix-hairpin-helix domain 16 81 1.6E-16 T 12-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain BAMF_2665 55625682b21ac732342dfac703d4d898 582 Pfam PF02811 PHP domain 349 525 2.6E-7 T 12-10-2018 IPR004013 PHP domain GO:0003824 BAMF_2665 55625682b21ac732342dfac703d4d898 582 SMART SM00481 348 427 6.2E-21 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BAMF_2665 55625682b21ac732342dfac703d4d898 582 SMART SM00278 60 79 89.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BAMF_2665 55625682b21ac732342dfac703d4d898 582 SMART SM00278 135 154 16.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BAMF_2665 55625682b21ac732342dfac703d4d898 582 SMART SM00278 100 119 71.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BAMF_2665 55625682b21ac732342dfac703d4d898 582 Gene3D G3DSA:1.10.150.110 8 94 1.2E-16 T 12-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily BAMF_2665 55625682b21ac732342dfac703d4d898 582 Gene3D G3DSA:3.30.460.10 164 270 4.4E-22 T 12-10-2018 BAMF_2665 55625682b21ac732342dfac703d4d898 582 Pfam PF14791 DNA polymerase beta thumb 265 326 1.4E-17 T 12-10-2018 IPR029398 DNA polymerase beta, thumb domain BAMF_2665 55625682b21ac732342dfac703d4d898 582 SMART SM00483 13 326 3.7E-104 T 12-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 BAMF_2665 55625682b21ac732342dfac703d4d898 582 Gene3D G3DSA:1.10.150.20 95 159 9.9E-20 T 12-10-2018 BAMF_2665 55625682b21ac732342dfac703d4d898 582 SUPERFAMILY SSF81301 164 326 1.64E-43 T 12-10-2018 BAMF_2665 55625682b21ac732342dfac703d4d898 582 SUPERFAMILY SSF89550 346 581 6.02E-53 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BAMF_2665 55625682b21ac732342dfac703d4d898 582 SUPERFAMILY SSF47802 10 86 1.16E-18 T 12-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily BAMF_2665 55625682b21ac732342dfac703d4d898 582 PIRSF PIRSF005047 13 582 1.0E-239 T 12-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2665 55625682b21ac732342dfac703d4d898 582 Pfam PF14520 Helix-hairpin-helix domain 102 156 2.9E-7 T 12-10-2018 BAMF_0667 0871afe3791bafb660e8544b1ec9ac47 303 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 128 4.1E-38 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BAMF_0667 0871afe3791bafb660e8544b1ec9ac47 303 SUPERFAMILY SSF111331 1 296 5.23E-87 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BAMF_0667 0871afe3791bafb660e8544b1ec9ac47 303 SMART SM00046 3 131 3.8E-8 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BAMF_0667 0871afe3791bafb660e8544b1ec9ac47 303 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 295 2.4E-133 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase BAMF_0667 0871afe3791bafb660e8544b1ec9ac47 303 Gene3D G3DSA:3.40.50.10330 6 125 6.5E-91 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BAMF_0667 0871afe3791bafb660e8544b1ec9ac47 303 Gene3D G3DSA:2.60.200.40 126 279 6.5E-91 T 12-10-2018 BAMF_0810 e929f241a8535dbeb5ad4bbaba2d6b3c 263 Hamap MF_01114 Regulatory protein RecX [recX]. 42 209 17.814 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 BAMF_0810 e929f241a8535dbeb5ad4bbaba2d6b3c 263 Gene3D G3DSA:1.10.10.10 215 263 6.4E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0810 e929f241a8535dbeb5ad4bbaba2d6b3c 263 Gene3D G3DSA:1.10.10.10 153 214 1.7E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0810 e929f241a8535dbeb5ad4bbaba2d6b3c 263 Gene3D G3DSA:1.10.10.2800 1 112 3.9E-39 T 12-10-2018 BAMF_0810 e929f241a8535dbeb5ad4bbaba2d6b3c 263 Pfam PF02631 RecX family 84 206 4.7E-29 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 BAMF_0810 e929f241a8535dbeb5ad4bbaba2d6b3c 263 Gene3D G3DSA:1.10.10.10 113 152 2.5E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3469 29bf3977466b1d1bca39e6409912f126 229 Gene3D G3DSA:3.40.50.300 2 229 7.5E-71 T 12-10-2018 BAMF_3469 29bf3977466b1d1bca39e6409912f126 229 Pfam PF13614 AAA domain 57 174 6.2E-14 T 12-10-2018 IPR025669 AAA domain BAMF_3469 29bf3977466b1d1bca39e6409912f126 229 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 26 228 8.2E-65 T 12-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 BAMF_3469 29bf3977466b1d1bca39e6409912f126 229 SUPERFAMILY SSF52540 46 220 5.97E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2154 d06ba4edc423bc3ce37b4738c2ab7289 185 Pfam PF07187 Protein of unknown function (DUF1405) 12 169 4.5E-59 T 12-10-2018 IPR009845 Protein of unknown function DUF1405 BAMF_3064 f14284d67182c9c6d6c25bb912099cc7 205 Pfam PF08241 Methyltransferase domain 51 156 9.1E-19 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BAMF_3064 f14284d67182c9c6d6c25bb912099cc7 205 Gene3D G3DSA:3.40.50.150 32 200 1.2E-34 T 12-10-2018 BAMF_3064 f14284d67182c9c6d6c25bb912099cc7 205 SUPERFAMILY SSF53335 30 180 6.1E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_1054 dd65dde856d8781442c539c785a8971f 131 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 112 1.2E-21 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BAMF_1054 dd65dde856d8781442c539c785a8971f 131 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 117 17.646 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BAMF_3720 2306e35ebeb8b227bf11eace28fc9cef 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 2.2E-64 T 12-10-2018 IPR016040 NAD(P)-binding domain BAMF_3720 2306e35ebeb8b227bf11eace28fc9cef 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 6.3E-5 T 12-10-2018 BAMF_3720 2306e35ebeb8b227bf11eace28fc9cef 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 6.3E-5 T 12-10-2018 BAMF_3720 2306e35ebeb8b227bf11eace28fc9cef 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 6.3E-5 T 12-10-2018 BAMF_3720 2306e35ebeb8b227bf11eace28fc9cef 338 Gene3D G3DSA:3.90.25.10 193 328 3.0E-149 T 12-10-2018 BAMF_3720 2306e35ebeb8b227bf11eace28fc9cef 338 Gene3D G3DSA:3.40.50.720 3 273 3.0E-149 T 12-10-2018 BAMF_3720 2306e35ebeb8b227bf11eace28fc9cef 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 6.6E-151 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BAMF_3720 2306e35ebeb8b227bf11eace28fc9cef 338 SUPERFAMILY SSF51735 1 336 1.11E-102 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1595 459ed0f488e97196b0ed1ef76e2bc28a 366 TIGRFAM TIGR02615 spoVE: stage V sporulation protein E 9 362 1.1E-186 T 12-10-2018 IPR013438 Sporulation stage V, protein E BAMF_1595 459ed0f488e97196b0ed1ef76e2bc28a 366 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 10 363 1.4E-132 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_1595 459ed0f488e97196b0ed1ef76e2bc28a 366 Pfam PF01098 Cell cycle protein 11 365 2.2E-132 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_1595 459ed0f488e97196b0ed1ef76e2bc28a 366 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 322 346 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_0443 71eaed4225533056c7d2b4a3109e1240 116 PIRSF PIRSF033490 1 113 2.8E-39 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 BAMF_0443 71eaed4225533056c7d2b4a3109e1240 116 Gene3D G3DSA:2.30.30.110 1 116 7.3E-52 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor BAMF_0443 71eaed4225533056c7d2b4a3109e1240 116 SUPERFAMILY SSF50118 2 113 2.78E-41 T 12-10-2018 BAMF_0443 71eaed4225533056c7d2b4a3109e1240 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 111 4.7E-33 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 BAMF_3035 56ae57ceaeec766ae592e500b7dd000c 91 Pfam PF06265 Protein of unknown function (DUF1027) 4 87 7.9E-39 T 12-10-2018 IPR009370 Protein of unknown function DUF1027 BAMF_3035 56ae57ceaeec766ae592e500b7dd000c 91 PIRSF PIRSF012565 1 91 9.2E-50 T 12-10-2018 IPR009370 Protein of unknown function DUF1027 BAMF_3035 56ae57ceaeec766ae592e500b7dd000c 91 Gene3D G3DSA:3.50.4.20 1 91 4.6E-44 T 12-10-2018 IPR038141 YutD-like superfamily BAMF_2662 7495aa36d2a71988695cc041ac7a07c5 235 Pfam PF10924 Protein of unknown function (DUF2711) 21 233 3.0E-77 T 12-10-2018 IPR024250 Protein of unknown function DUF2711 BAMF_2662 7495aa36d2a71988695cc041ac7a07c5 235 ProDom PD114754 YWBB 11 233 4.0E-47 T 12-10-2018 IPR024250 Protein of unknown function DUF2711 BAMF_3853 3a2f44841fdc2946def3fe80c60f73cd 303 Pfam PF03413 Peptidase propeptide and YPEB domain 115 171 0.0036 T 12-10-2018 IPR025711 PepSY domain BAMF_3853 3a2f44841fdc2946def3fe80c60f73cd 303 Pfam PF03413 Peptidase propeptide and YPEB domain 47 106 7.0E-4 T 12-10-2018 IPR025711 PepSY domain BAMF_3853 3a2f44841fdc2946def3fe80c60f73cd 303 Pfam PF03413 Peptidase propeptide and YPEB domain 181 238 0.001 T 12-10-2018 IPR025711 PepSY domain BAMF_3853 3a2f44841fdc2946def3fe80c60f73cd 303 Pfam PF03413 Peptidase propeptide and YPEB domain 248 301 0.0018 T 12-10-2018 IPR025711 PepSY domain BAMF_3853 3a2f44841fdc2946def3fe80c60f73cd 303 Gene3D G3DSA:3.10.450.40 240 303 1.5E-9 T 12-10-2018 BAMF_3853 3a2f44841fdc2946def3fe80c60f73cd 303 Gene3D G3DSA:3.10.450.40 37 109 1.9E-5 T 12-10-2018 BAMF_3853 3a2f44841fdc2946def3fe80c60f73cd 303 Gene3D G3DSA:3.10.450.40 175 239 9.7E-9 T 12-10-2018 BAMF_3853 3a2f44841fdc2946def3fe80c60f73cd 303 Gene3D G3DSA:3.10.450.40 110 174 4.4E-9 T 12-10-2018 BAMF_2550 c9ac7228c53aad08f86a1f4d9c55ae69 353 Pfam PF01594 AI-2E family transporter 24 342 1.1E-83 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like BAMF_3462 18c65e4d47ff14016ceda8bb37edb0fa 183 Pfam PF14435 SUKH-4 immunity protein 16 175 6.4E-11 T 12-10-2018 IPR025851 SUKH-4 immunity protein BAMF_1093 b78fd31c1ce7bf992d81a7c6a32b6df6 118 Pfam PF12732 YtxH-like protein 8 92 3.6E-12 T 12-10-2018 IPR024623 Uncharacterised protein family YtxH BAMF_1093 b78fd31c1ce7bf992d81a7c6a32b6df6 118 SUPERFAMILY SSF55194 20 104 5.31E-5 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 BAMF_0705 dee353d97d3a7d417937831e7743ce4e 284 Gene3D G3DSA:1.10.287.950 109 284 3.4E-40 T 12-10-2018 BAMF_0705 dee353d97d3a7d417937831e7743ce4e 284 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 150 280 3.7E-30 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_0705 dee353d97d3a7d417937831e7743ce4e 284 SUPERFAMILY SSF58104 114 280 2.35E-41 T 12-10-2018 BAMF_0705 dee353d97d3a7d417937831e7743ce4e 284 SUPERFAMILY SSF103190 52 115 5.49E-6 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BAMF_0705 dee353d97d3a7d417937831e7743ce4e 284 SMART SM00283 99 283 6.8E-5 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BAMF_1617 e3f3a59fec70505ba4f612c80761ecfb 304 Gene3D G3DSA:3.10.290.10 2 71 8.7E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BAMF_1617 e3f3a59fec70505ba4f612c80761ecfb 304 Pfam PF01479 S4 domain 15 61 1.7E-13 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_1617 e3f3a59fec70505ba4f612c80761ecfb 304 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 11 301 1.1E-109 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_1617 e3f3a59fec70505ba4f612c80761ecfb 304 SUPERFAMILY SSF55120 73 301 1.67E-81 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_1617 e3f3a59fec70505ba4f612c80761ecfb 304 SUPERFAMILY SSF55174 15 101 1.16E-15 T 12-10-2018 BAMF_1617 e3f3a59fec70505ba4f612c80761ecfb 304 Pfam PF00849 RNA pseudouridylate synthase 88 242 5.8E-38 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_1617 e3f3a59fec70505ba4f612c80761ecfb 304 SMART SM00363 15 72 1.3E-12 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_1617 e3f3a59fec70505ba4f612c80761ecfb 304 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_1617 e3f3a59fec70505ba4f612c80761ecfb 304 Gene3D G3DSA:3.30.2350.10 81 304 5.5E-78 T 12-10-2018 BAMF_3802 c833f67c67afe8e99370c77e3b729c6f 388 Gene3D G3DSA:1.20.1250.20 2 375 4.6E-40 T 12-10-2018 BAMF_3802 c833f67c67afe8e99370c77e3b729c6f 388 Pfam PF07690 Major Facilitator Superfamily 12 280 8.3E-28 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_3802 c833f67c67afe8e99370c77e3b729c6f 388 SUPERFAMILY SSF103473 7 377 1.23E-48 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_2248 652845f6797b1a249ee0b71ac82b68dd 149 Gene3D G3DSA:3.30.1490.190 93 149 4.5E-17 T 12-10-2018 BAMF_2248 652845f6797b1a249ee0b71ac82b68dd 149 Pfam PF01475 Ferric uptake regulator family 15 136 3.1E-40 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BAMF_2248 652845f6797b1a249ee0b71ac82b68dd 149 Gene3D G3DSA:1.10.10.10 1 88 6.1E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2248 652845f6797b1a249ee0b71ac82b68dd 149 SUPERFAMILY SSF46785 7 141 2.27E-38 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1026 8a216ea37fa94cd178f7a4376f1124c2 555 Pfam PF01266 FAD dependent oxidoreductase 24 353 1.8E-51 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BAMF_1026 8a216ea37fa94cd178f7a4376f1124c2 555 SUPERFAMILY SSF54373 252 345 3.01E-11 T 12-10-2018 BAMF_1026 8a216ea37fa94cd178f7a4376f1124c2 555 Gene3D G3DSA:1.10.8.870 422 553 3.6E-43 T 12-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BAMF_1026 8a216ea37fa94cd178f7a4376f1124c2 555 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 28 45 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BAMF_1026 8a216ea37fa94cd178f7a4376f1124c2 555 Gene3D G3DSA:3.30.9.10 105 346 1.3E-137 T 12-10-2018 BAMF_1026 8a216ea37fa94cd178f7a4376f1124c2 555 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 406 534 2.1E-25 T 12-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BAMF_1026 8a216ea37fa94cd178f7a4376f1124c2 555 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 23 35 1.5E-30 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BAMF_1026 8a216ea37fa94cd178f7a4376f1124c2 555 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 369 381 1.5E-30 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BAMF_1026 8a216ea37fa94cd178f7a4376f1124c2 555 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 52 64 1.5E-30 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BAMF_1026 8a216ea37fa94cd178f7a4376f1124c2 555 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 97 109 1.5E-30 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BAMF_1026 8a216ea37fa94cd178f7a4376f1124c2 555 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 339 345 1.5E-30 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BAMF_1026 8a216ea37fa94cd178f7a4376f1124c2 555 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 36 46 1.5E-30 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BAMF_1026 8a216ea37fa94cd178f7a4376f1124c2 555 Gene3D G3DSA:3.50.50.60 21 382 1.3E-137 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1026 8a216ea37fa94cd178f7a4376f1124c2 555 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 374 384 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BAMF_1026 8a216ea37fa94cd178f7a4376f1124c2 555 SUPERFAMILY SSF51905 2 240 9.36E-35 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_2072 08a9c04ec33554880889c3675e71841a 177 SUPERFAMILY SSF55068 3 168 2.09E-70 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BAMF_2072 08a9c04ec33554880889c3675e71841a 177 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 164 36.286 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BAMF_2072 08a9c04ec33554880889c3675e71841a 177 Gene3D G3DSA:3.30.1060.10 1 164 6.0E-66 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BAMF_2072 08a9c04ec33554880889c3675e71841a 177 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 157 6.3E-68 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BAMF_2072 08a9c04ec33554880889c3675e71841a 177 Pfam PF01625 Peptide methionine sulfoxide reductase 8 157 3.8E-60 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BAMF_3902 8599f531b71f7cf002fdbea3117a9e33 175 SUPERFAMILY SSF53155 6 85 5.89E-11 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BAMF_3902 8599f531b71f7cf002fdbea3117a9e33 175 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 89 168 7.3E-31 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BAMF_3902 8599f531b71f7cf002fdbea3117a9e33 175 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 88 167 4.2E-35 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BAMF_3902 8599f531b71f7cf002fdbea3117a9e33 175 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 138 144 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BAMF_3902 8599f531b71f7cf002fdbea3117a9e33 175 Gene3D G3DSA:1.10.10.10 87 173 4.8E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3902 8599f531b71f7cf002fdbea3117a9e33 175 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 6 85 2.7E-6 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BAMF_3902 8599f531b71f7cf002fdbea3117a9e33 175 SUPERFAMILY SSF46767 87 169 3.92E-31 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 BAMF_1987 abf2497d6630f8bd3acc751e3d5ed7d7 167 SUPERFAMILY SSF55729 79 152 5.42E-6 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_1987 abf2497d6630f8bd3acc751e3d5ed7d7 167 Gene3D G3DSA:3.40.630.30 23 160 2.6E-5 T 12-10-2018 BAMF_1979 6fb869e3880f6522b9d0bde571284beb 236 Gene3D G3DSA:1.10.10.60 180 235 2.5E-16 T 12-10-2018 BAMF_1979 6fb869e3880f6522b9d0bde571284beb 236 SMART SM00342 146 229 7.7E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BAMF_1979 6fb869e3880f6522b9d0bde571284beb 236 Pfam PF07883 Cupin domain 18 76 2.3E-9 T 12-10-2018 IPR013096 Cupin 2, conserved barrel BAMF_1979 6fb869e3880f6522b9d0bde571284beb 236 SUPERFAMILY SSF51182 17 86 6.05E-12 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BAMF_1979 6fb869e3880f6522b9d0bde571284beb 236 SUPERFAMILY SSF46689 182 232 7.62E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_1979 6fb869e3880f6522b9d0bde571284beb 236 Gene3D G3DSA:2.60.120.10 10 80 1.6E-10 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_1979 6fb869e3880f6522b9d0bde571284beb 236 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 229 8.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BAMF_1979 6fb869e3880f6522b9d0bde571284beb 236 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 198 213 8.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BAMF_1979 6fb869e3880f6522b9d0bde571284beb 236 SUPERFAMILY SSF46689 135 179 4.48E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_1979 6fb869e3880f6522b9d0bde571284beb 236 Pfam PF12833 Helix-turn-helix domain 152 230 3.0E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BAMF_1979 6fb869e3880f6522b9d0bde571284beb 236 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 183 225 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BAMF_1979 6fb869e3880f6522b9d0bde571284beb 236 Gene3D G3DSA:1.10.10.60 127 179 2.2E-12 T 12-10-2018 BAMF_2667 5d30c5d1e0e6c7c3de069ff12c774884 85 Gene3D G3DSA:1.10.20.30 4 47 1.4E-5 T 12-10-2018 BAMF_2667 5d30c5d1e0e6c7c3de069ff12c774884 85 SUPERFAMILY SSF102829 10 84 1.83E-20 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily BAMF_2667 5d30c5d1e0e6c7c3de069ff12c774884 85 Pfam PF05164 Cell division protein ZapA 10 82 1.7E-16 T 12-10-2018 IPR007838 Cell division protein ZapA-like BAMF_1407 9ee07d3696838e790132812cd60ef48b 785 Gene3D G3DSA:3.20.20.210 411 778 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BAMF_1407 9ee07d3696838e790132812cd60ef48b 785 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 32 780 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BAMF_1407 9ee07d3696838e790132812cd60ef48b 785 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 453 775 5.1E-156 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BAMF_1407 9ee07d3696838e790132812cd60ef48b 785 PIRSF PIRSF000382 26 784 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BAMF_1407 9ee07d3696838e790132812cd60ef48b 785 SUPERFAMILY SSF51726 420 779 1.96E-115 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BAMF_1407 9ee07d3696838e790132812cd60ef48b 785 SUPERFAMILY SSF51726 29 409 5.36E-91 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BAMF_1407 9ee07d3696838e790132812cd60ef48b 785 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 27 780 33.995 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BAMF_1407 9ee07d3696838e790132812cd60ef48b 785 Gene3D G3DSA:3.20.20.210 31 546 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BAMF_1407 9ee07d3696838e790132812cd60ef48b 785 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 29 332 3.0E-117 T 12-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BAMF_3732 7effd57907aa4eeb61f401a4e2fcb945 239 Gene3D G3DSA:2.60.120.200 20 108 7.9E-21 T 12-10-2018 BAMF_3732 7effd57907aa4eeb61f401a4e2fcb945 239 Gene3D G3DSA:2.60.120.200 109 239 7.9E-50 T 12-10-2018 BAMF_3732 7effd57907aa4eeb61f401a4e2fcb945 239 ProSitePatterns PS01034 Glycosyl hydrolases family 16 active sites. 130 140 - T 12-10-2018 IPR008263 Glycoside hydrolase, family 16, active site GO:0004553|GO:0005975 BAMF_3732 7effd57907aa4eeb61f401a4e2fcb945 239 PRINTS PR00737 Glycosyl hydrolase family 16 signature 201 223 8.7E-81 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BAMF_3732 7effd57907aa4eeb61f401a4e2fcb945 239 PRINTS PR00737 Glycosyl hydrolase family 16 signature 87 105 8.7E-81 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BAMF_3732 7effd57907aa4eeb61f401a4e2fcb945 239 PRINTS PR00737 Glycosyl hydrolase family 16 signature 161 178 8.7E-81 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BAMF_3732 7effd57907aa4eeb61f401a4e2fcb945 239 PRINTS PR00737 Glycosyl hydrolase family 16 signature 106 122 8.7E-81 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BAMF_3732 7effd57907aa4eeb61f401a4e2fcb945 239 PRINTS PR00737 Glycosyl hydrolase family 16 signature 143 156 8.7E-81 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BAMF_3732 7effd57907aa4eeb61f401a4e2fcb945 239 PRINTS PR00737 Glycosyl hydrolase family 16 signature 127 142 8.7E-81 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BAMF_3732 7effd57907aa4eeb61f401a4e2fcb945 239 PRINTS PR00737 Glycosyl hydrolase family 16 signature 225 237 8.7E-81 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BAMF_3732 7effd57907aa4eeb61f401a4e2fcb945 239 PRINTS PR00737 Glycosyl hydrolase family 16 signature 181 198 8.7E-81 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BAMF_3732 7effd57907aa4eeb61f401a4e2fcb945 239 SUPERFAMILY SSF49899 30 238 3.58E-61 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BAMF_3732 7effd57907aa4eeb61f401a4e2fcb945 239 Pfam PF00722 Glycosyl hydrolases family 16 52 234 4.0E-45 T 12-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 BAMF_0084 1508cca6f5d97dacef86937ee08db818 363 Gene3D G3DSA:3.30.590.10 8 263 1.4E-71 T 12-10-2018 BAMF_0084 1508cca6f5d97dacef86937ee08db818 363 SUPERFAMILY SSF55931 3 268 3.36E-87 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BAMF_0084 1508cca6f5d97dacef86937ee08db818 363 ProSitePatterns PS00112 Phosphagen kinase active site signature. 167 173 - T 12-10-2018 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 BAMF_0084 1508cca6f5d97dacef86937ee08db818 363 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 54 253 8.3E-73 T 12-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 BAMF_0084 1508cca6f5d97dacef86937ee08db818 363 Hamap MF_00602 Protein-arginine kinase [mcsB]. 13 350 40.396 T 12-10-2018 IPR023660 Protein arginine kinase GO:0016775 BAMF_0327 70a8fec641e48547fbdd44d8fe28194f 492 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 158 170 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BAMF_0327 70a8fec641e48547fbdd44d8fe28194f 492 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 84 108 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BAMF_0327 70a8fec641e48547fbdd44d8fe28194f 492 Pfam PF00854 POT family 96 460 7.1E-87 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BAMF_0327 70a8fec641e48547fbdd44d8fe28194f 492 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 488 2.6E-136 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 BAMF_0327 70a8fec641e48547fbdd44d8fe28194f 492 Gene3D G3DSA:1.20.1250.20 1 492 5.3E-152 T 12-10-2018 BAMF_0327 70a8fec641e48547fbdd44d8fe28194f 492 SUPERFAMILY SSF103473 14 486 1.83E-34 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_1221 089930729fb0f5f8ca0848d47872af30 395 SUPERFAMILY SSF51445 46 302 1.31E-6 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_1221 089930729fb0f5f8ca0848d47872af30 395 Pfam PF13200 Putative glycosyl hydrolase domain 64 386 8.2E-129 T 12-10-2018 IPR025275 Putative glycosyl hydrolase domain DUF4015 BAMF_3095 ef1423ab617ce860e3f6405c4c917f6d 648 ProSitePatterns PS00447 DNA polymerase family A signature. 437 456 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_3095 ef1423ab617ce860e3f6405c4c917f6d 648 Gene3D G3DSA:1.10.150.20 390 497 1.9E-16 T 12-10-2018 BAMF_3095 ef1423ab617ce860e3f6405c4c917f6d 648 Gene3D G3DSA:3.30.70.370 366 389 1.9E-16 T 12-10-2018 BAMF_3095 ef1423ab617ce860e3f6405c4c917f6d 648 SMART SM00482 367 613 1.0E-47 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_3095 ef1423ab617ce860e3f6405c4c917f6d 648 SUPERFAMILY SSF56672 188 647 3.78E-81 T 12-10-2018 BAMF_3095 ef1423ab617ce860e3f6405c4c917f6d 648 Pfam PF00476 DNA polymerase family A 226 627 1.8E-17 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_1588 3e1b08c897868c31818ff2d38f7a05d4 311 SUPERFAMILY SSF81799 113 214 1.44E-36 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 BAMF_1588 3e1b08c897868c31818ff2d38f7a05d4 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 309 2.2E-136 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BAMF_1588 3e1b08c897868c31818ff2d38f7a05d4 311 Pfam PF01795 MraW methylase family 2 310 4.6E-138 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BAMF_1588 3e1b08c897868c31818ff2d38f7a05d4 311 Gene3D G3DSA:3.40.50.150 7 309 1.3E-108 T 12-10-2018 BAMF_1588 3e1b08c897868c31818ff2d38f7a05d4 311 Gene3D G3DSA:1.10.150.170 111 215 1.3E-108 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 BAMF_1588 3e1b08c897868c31818ff2d38f7a05d4 311 SUPERFAMILY SSF53335 4 309 3.47E-47 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_1588 3e1b08c897868c31818ff2d38f7a05d4 311 PIRSF PIRSF004486 1 311 3.9E-111 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BAMF_1588 3e1b08c897868c31818ff2d38f7a05d4 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 310 39.361 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BAMF_0536 c8d4f7785521c4e2451deebce73dff56 250 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 223 3.7E-73 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BAMF_0536 c8d4f7785521c4e2451deebce73dff56 250 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 218 9.2E-59 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BAMF_0536 c8d4f7785521c4e2451deebce73dff56 250 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 237 16.26 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BAMF_0536 c8d4f7785521c4e2451deebce73dff56 250 ProSitePatterns PS01218 TatC family signature. 151 170 - T 12-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site BAMF_0536 c8d4f7785521c4e2451deebce73dff56 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 99 125 4.1E-42 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BAMF_0536 c8d4f7785521c4e2451deebce73dff56 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 151 179 4.1E-42 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BAMF_0536 c8d4f7785521c4e2451deebce73dff56 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 4.1E-42 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BAMF_0536 c8d4f7785521c4e2451deebce73dff56 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 81 99 4.1E-42 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BAMF_2856 006c28e5d18bd254d25a626a8adc7e82 63 Pfam PF07561 Domain of Unknown Function (DUF1540) 16 58 3.2E-16 T 12-10-2018 IPR011437 Domain of unknown function DUF1540 BAMF_0739 4486d34608ee6c155cfccbc91d464047 147 Pfam PF10787 Uncharacterised protein from bacillus cereus group 2 141 8.9E-65 T 12-10-2018 IPR019723 Uncharacterised protein, YfmQ BAMF_3662 188158e5a6fc1952c95ae08899c79c50 200 Pfam PF01323 DSBA-like thioredoxin domain 4 193 1.6E-38 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 BAMF_3662 188158e5a6fc1952c95ae08899c79c50 200 SUPERFAMILY SSF52833 1 199 4.87E-41 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_3662 188158e5a6fc1952c95ae08899c79c50 200 Gene3D G3DSA:3.40.30.10 1 196 1.8E-49 T 12-10-2018 BAMF_3050 8a5886e92e508ab0735e5cab7e9f4b12 368 SUPERFAMILY SSF52540 4 243 7.92E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3050 8a5886e92e508ab0735e5cab7e9f4b12 368 Pfam PF00005 ABC transporter 21 162 1.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3050 8a5886e92e508ab0735e5cab7e9f4b12 368 SUPERFAMILY SSF50331 237 366 1.65E-27 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BAMF_3050 8a5886e92e508ab0735e5cab7e9f4b12 368 SMART SM00382 29 212 1.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3050 8a5886e92e508ab0735e5cab7e9f4b12 368 Gene3D G3DSA:3.40.50.300 1 239 1.1E-72 T 12-10-2018 BAMF_3050 8a5886e92e508ab0735e5cab7e9f4b12 368 Gene3D G3DSA:2.40.50.100 240 366 2.4E-25 T 12-10-2018 BAMF_3050 8a5886e92e508ab0735e5cab7e9f4b12 368 Gene3D G3DSA:2.40.50.140 288 352 2.4E-25 T 12-10-2018 BAMF_3050 8a5886e92e508ab0735e5cab7e9f4b12 368 Pfam PF08402 TOBE domain 286 359 1.2E-7 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 BAMF_3050 8a5886e92e508ab0735e5cab7e9f4b12 368 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0372 a87de8a2212e98df85a35456fa6b4f85 254 Gene3D G3DSA:3.20.20.370 2 253 1.1E-104 T 12-10-2018 BAMF_0372 a87de8a2212e98df85a35456fa6b4f85 254 SUPERFAMILY SSF88713 3 251 2.22E-101 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BAMF_0372 a87de8a2212e98df85a35456fa6b4f85 254 Pfam PF03746 LamB/YcsF family 4 242 1.7E-103 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 BAMF_0372 a87de8a2212e98df85a35456fa6b4f85 254 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 46.597 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 BAMF_1977 6cbb8c1f28d54179beb63e79b88a8961 113 Gene3D G3DSA:2.40.50.480 26 113 1.6E-13 T 12-10-2018 IPR036166 YxeA-like superfamily BAMF_1977 6cbb8c1f28d54179beb63e79b88a8961 113 SUPERFAMILY SSF159121 30 111 1.02E-15 T 12-10-2018 IPR036166 YxeA-like superfamily BAMF_1977 6cbb8c1f28d54179beb63e79b88a8961 113 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 1 105 1.3E-8 T 12-10-2018 IPR006542 Protein of unknown function DUF1093 BAMF_1977 6cbb8c1f28d54179beb63e79b88a8961 113 Pfam PF06486 Protein of unknown function (DUF1093) 30 98 9.2E-12 T 12-10-2018 IPR006542 Protein of unknown function DUF1093 BAMF_0926 372970073641b9b910c96dd42f1cb520 270 Gene3D G3DSA:3.30.470.30 28 139 1.9E-45 T 12-10-2018 BAMF_0926 372970073641b9b910c96dd42f1cb520 270 Gene3D G3DSA:3.30.1490.70 11 181 1.9E-45 T 12-10-2018 BAMF_0926 372970073641b9b910c96dd42f1cb520 270 SUPERFAMILY SSF56091 3 182 5.04E-42 T 12-10-2018 BAMF_0926 372970073641b9b910c96dd42f1cb520 270 Pfam PF01068 ATP dependent DNA ligase domain 12 182 8.7E-29 T 12-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 BAMF_3714 ea5c8859f4c446ec00e86e115b767b5d 447 PIRSF PIRSF005348 11 447 1.4E-163 T 12-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 BAMF_3714 ea5c8859f4c446ec00e86e115b767b5d 447 Pfam PF03390 2-hydroxycarboxylate transporter family 31 439 1.1E-148 T 12-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 BAMF_1432 e7368465eb791bd12a27c87e26efda2e 224 Pfam PF04239 Protein of unknown function (DUF421) 84 170 6.6E-18 T 12-10-2018 IPR007353 Protein of unknown function DUF421 BAMF_1432 e7368465eb791bd12a27c87e26efda2e 224 Gene3D G3DSA:3.30.240.20 76 145 1.1E-16 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_0044 4568ade5899358559f0c9c949a5a1a7d 86 Pfam PF06257 Biofilm formation stimulator VEG 4 74 3.6E-31 T 12-10-2018 IPR009366 Protein Veg GO:0006355 BAMF_0044 4568ade5899358559f0c9c949a5a1a7d 86 PIRSF PIRSF037257 1 85 6.2E-37 T 12-10-2018 IPR009366 Protein Veg GO:0006355 BAMF_0044 4568ade5899358559f0c9c949a5a1a7d 86 Gene3D G3DSA:2.30.30.100 1 78 1.9E-25 T 12-10-2018 BAMF_2926 79aa94248c53ad7b98d3b3efe89e3c63 479 Gene3D G3DSA:3.20.20.70 140 479 1.0E-106 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_2926 79aa94248c53ad7b98d3b3efe89e3c63 479 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 95 113 - T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 BAMF_2926 79aa94248c53ad7b98d3b3efe89e3c63 479 Pfam PF01894 Uncharacterised protein family UPF0047 17 130 1.9E-37 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 BAMF_2926 79aa94248c53ad7b98d3b3efe89e3c63 479 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 3 132 1.4E-55 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 BAMF_2926 79aa94248c53ad7b98d3b3efe89e3c63 479 SUPERFAMILY SSF51412 142 467 9.92E-58 T 12-10-2018 BAMF_2926 79aa94248c53ad7b98d3b3efe89e3c63 479 SUPERFAMILY SSF111038 4 131 1.57E-45 T 12-10-2018 IPR035917 YjbQ-like superfamily BAMF_2926 79aa94248c53ad7b98d3b3efe89e3c63 479 Pfam PF03060 Nitronate monooxygenase 143 479 2.4E-96 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 BAMF_2926 79aa94248c53ad7b98d3b3efe89e3c63 479 Gene3D G3DSA:2.60.120.460 1 132 5.4E-52 T 12-10-2018 IPR035917 YjbQ-like superfamily BAMF_3116 5edb57a6cac6b1385c9dd6a22f106fd7 116 SUPERFAMILY SSF55718 25 112 3.77E-11 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BAMF_3116 5edb57a6cac6b1385c9dd6a22f106fd7 116 Gene3D G3DSA:3.30.1050.10 10 104 2.1E-10 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BAMF_3116 5edb57a6cac6b1385c9dd6a22f106fd7 116 Pfam PF02036 SCP-2 sterol transfer family 21 102 4.9E-9 T 12-10-2018 IPR003033 SCP2 sterol-binding domain BAMF_1665 0c688b825d46db0a70ef460f31bf3c91 249 SUPERFAMILY SSF69065 17 177 7.85E-53 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BAMF_1665 0c688b825d46db0a70ef460f31bf3c91 249 Pfam PF14622 Ribonuclease-III-like 33 163 6.6E-37 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BAMF_1665 0c688b825d46db0a70ef460f31bf3c91 249 Hamap MF_00104 Ribonuclease 3 [rnc]. 23 239 31.805 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 BAMF_1665 0c688b825d46db0a70ef460f31bf3c91 249 Pfam PF00035 Double-stranded RNA binding motif 177 242 3.2E-16 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain BAMF_1665 0c688b825d46db0a70ef460f31bf3c91 249 SMART SM00535 35 170 2.2E-62 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BAMF_1665 0c688b825d46db0a70ef460f31bf3c91 249 SUPERFAMILY SSF54768 164 245 4.24E-23 T 12-10-2018 BAMF_1665 0c688b825d46db0a70ef460f31bf3c91 249 SMART SM00358 176 243 8.4E-23 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain BAMF_1665 0c688b825d46db0a70ef460f31bf3c91 249 Gene3D G3DSA:1.10.1520.10 19 165 4.3E-48 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BAMF_1665 0c688b825d46db0a70ef460f31bf3c91 249 ProSitePatterns PS00517 Ribonuclease III family signature. 59 67 - T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BAMF_1665 0c688b825d46db0a70ef460f31bf3c91 249 Gene3D G3DSA:3.30.160.20 175 242 9.1E-22 T 12-10-2018 BAMF_1665 0c688b825d46db0a70ef460f31bf3c91 249 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 23 242 9.0E-81 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 BAMF_1926 d5e517a5d3bcb339b11941cdd2c558dd 297 Pfam PF00483 Nucleotidyl transferase 7 251 3.2E-34 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BAMF_1926 d5e517a5d3bcb339b11941cdd2c558dd 297 Gene3D G3DSA:3.90.550.10 1 292 2.5E-90 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_1926 d5e517a5d3bcb339b11941cdd2c558dd 297 SUPERFAMILY SSF53448 2 267 2.71E-68 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_1926 d5e517a5d3bcb339b11941cdd2c558dd 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 265 5.1E-119 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 BAMF_2176 50eb05d55584989ac501ce1a8b191409 233 Gene3D G3DSA:3.40.50.150 15 233 5.0E-66 T 12-10-2018 BAMF_2176 50eb05d55584989ac501ce1a8b191409 233 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 20 35 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BAMF_2176 50eb05d55584989ac501ce1a8b191409 233 TIGRFAM TIGR02752 MenG_heptapren: demethylmenaquinone methyltransferase 3 233 4.4E-137 T 12-10-2018 IPR014122 Demethylmenaquinone methyltransferase GO:0008168|GO:0009234 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BAMF_2176 50eb05d55584989ac501ce1a8b191409 233 SUPERFAMILY SSF53335 4 227 2.59E-48 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_2176 50eb05d55584989ac501ce1a8b191409 233 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 141 155 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BAMF_2176 50eb05d55584989ac501ce1a8b191409 233 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 9 233 1.7E-80 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BAMF_2176 50eb05d55584989ac501ce1a8b191409 233 Pfam PF01209 ubiE/COQ5 methyltransferase family 1 233 8.3E-113 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BAMF_2176 50eb05d55584989ac501ce1a8b191409 233 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 233 35.789 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BAMF_1539 013e6b47ea6b38ae680c8ce3fd81f7bf 39 Pfam PF13790 SR1 protein 1 38 9.5E-21 T 12-10-2018 IPR025236 SR1 protein BAMF_1006 0c909e4ff02a9e4764d118accb5fa6e1 66 SMART SM00357 3 66 1.3E-30 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 BAMF_1006 0c909e4ff02a9e4764d118accb5fa6e1 66 Gene3D G3DSA:2.40.50.140 1 66 8.4E-31 T 12-10-2018 BAMF_1006 0c909e4ff02a9e4764d118accb5fa6e1 66 PRINTS PR00050 Cold shock protein signature 24 33 5.3E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BAMF_1006 0c909e4ff02a9e4764d118accb5fa6e1 66 PRINTS PR00050 Cold shock protein signature 39 57 5.3E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BAMF_1006 0c909e4ff02a9e4764d118accb5fa6e1 66 PRINTS PR00050 Cold shock protein signature 4 19 5.3E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BAMF_1006 0c909e4ff02a9e4764d118accb5fa6e1 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.0E-30 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BAMF_1006 0c909e4ff02a9e4764d118accb5fa6e1 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 12-10-2018 IPR019844 Cold-shock conserved site BAMF_1006 0c909e4ff02a9e4764d118accb5fa6e1 66 PIRSF PIRSF002599 1 66 4.6E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 BAMF_1006 0c909e4ff02a9e4764d118accb5fa6e1 66 SUPERFAMILY SSF50249 1 64 1.41E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_1079 c6167b1bc8e42d6a2dce80fd8b5d3c53 255 Gene3D G3DSA:1.10.12.10 199 255 3.0E-16 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal BAMF_1079 c6167b1bc8e42d6a2dce80fd8b5d3c53 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 254 2.7E-44 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BAMF_1079 c6167b1bc8e42d6a2dce80fd8b5d3c53 255 SUPERFAMILY SSF52096 1 254 5.43E-66 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BAMF_1079 c6167b1bc8e42d6a2dce80fd8b5d3c53 255 Gene3D G3DSA:3.90.226.10 1 189 1.7E-52 T 12-10-2018 BAMF_2726 07c8930c2484034baf44dfcaf8599c0e 1115 SMART SM00481 7 74 1.4E-23 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BAMF_2726 07c8930c2484034baf44dfcaf8599c0e 1115 SUPERFAMILY SSF89550 13 251 3.73E-12 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BAMF_2726 07c8930c2484034baf44dfcaf8599c0e 1115 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 993 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2726 07c8930c2484034baf44dfcaf8599c0e 1115 Pfam PF14579 Helix-hairpin-helix motif 779 866 6.9E-24 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2726 07c8930c2484034baf44dfcaf8599c0e 1115 Pfam PF02811 PHP domain 8 168 6.4E-33 T 12-10-2018 IPR004013 PHP domain GO:0003824 BAMF_2726 07c8930c2484034baf44dfcaf8599c0e 1115 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 283 705 2.0E-172 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2726 07c8930c2484034baf44dfcaf8599c0e 1115 Pfam PF01336 OB-fold nucleic acid binding domain 965 1030 2.1E-9 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BAMF_2726 07c8930c2484034baf44dfcaf8599c0e 1115 Gene3D G3DSA:3.20.20.140 2 262 1.5E-69 T 12-10-2018 BAMF_2726 07c8930c2484034baf44dfcaf8599c0e 1115 Gene3D G3DSA:1.10.10.1600 416 493 1.0E-21 T 12-10-2018 BAMF_1561 a889251c436bb7353cba2d4115eddf4f 308 Hamap MF_01664 Heme A synthase [ctaA]. 1 304 28.709 T 12-10-2018 IPR023755 Heme A synthase, type 1 GO:0006784|GO:0016020|GO:0016627|GO:0055114 BAMF_1561 a889251c436bb7353cba2d4115eddf4f 308 Pfam PF02628 Cytochrome oxidase assembly protein 53 289 1.3E-28 T 12-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 BAMF_1027 77f4801fbcc7c4163028bad8f11b02c3 580 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_1027 77f4801fbcc7c4163028bad8f11b02c3 580 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 504 550 7.9E-10 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_1027 77f4801fbcc7c4163028bad8f11b02c3 580 Gene3D G3DSA:3.40.120.10 209 324 3.0E-22 T 12-10-2018 BAMF_1027 77f4801fbcc7c4163028bad8f11b02c3 580 SUPERFAMILY SSF53738 209 315 2.35E-19 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_1027 77f4801fbcc7c4163028bad8f11b02c3 580 Gene3D G3DSA:3.30.310.50 469 573 1.8E-9 T 12-10-2018 BAMF_1027 77f4801fbcc7c4163028bad8f11b02c3 580 Gene3D G3DSA:3.40.120.10 325 452 7.1E-37 T 12-10-2018 BAMF_1027 77f4801fbcc7c4163028bad8f11b02c3 580 SUPERFAMILY SSF55957 447 573 4.71E-15 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_1027 77f4801fbcc7c4163028bad8f11b02c3 580 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 296 311 7.2E-6 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_1027 77f4801fbcc7c4163028bad8f11b02c3 580 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 7.2E-6 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_1027 77f4801fbcc7c4163028bad8f11b02c3 580 SUPERFAMILY SSF53738 304 455 3.81E-33 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_1027 77f4801fbcc7c4163028bad8f11b02c3 580 Gene3D G3DSA:3.40.120.10 35 190 2.0E-47 T 12-10-2018 BAMF_1027 77f4801fbcc7c4163028bad8f11b02c3 580 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 182 2.7E-42 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_1027 77f4801fbcc7c4163028bad8f11b02c3 580 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 312 2.7E-23 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_1027 77f4801fbcc7c4163028bad8f11b02c3 580 SUPERFAMILY SSF53738 30 225 1.06E-46 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_1027 77f4801fbcc7c4163028bad8f11b02c3 580 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 324 451 5.3E-24 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BAMF_3327 1d2e49466d637ed8f2782d7279fd5da3 490 SUPERFAMILY SSF54001 356 487 2.94E-29 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BAMF_3327 1d2e49466d637ed8f2782d7279fd5da3 490 Pfam PF00877 NlpC/P60 family 374 484 3.2E-29 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BAMF_3327 1d2e49466d637ed8f2782d7279fd5da3 490 Gene3D G3DSA:3.90.1720.10 361 490 4.7E-31 T 12-10-2018 BAMF_3532 eb76a720bde1f92cf33b753e3038f94a 346 SUPERFAMILY SSF55821 20 215 7.94E-68 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BAMF_3532 eb76a720bde1f92cf33b753e3038f94a 346 PIRSF PIRSF004930 1 346 8.6E-132 T 12-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 BAMF_3532 eb76a720bde1f92cf33b753e3038f94a 346 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 17 212 8.8E-70 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 BAMF_3532 eb76a720bde1f92cf33b753e3038f94a 346 Gene3D G3DSA:3.90.870.10 9 219 1.6E-83 T 12-10-2018 BAMF_3532 eb76a720bde1f92cf33b753e3038f94a 346 Pfam PF01300 Telomere recombination 26 203 3.2E-58 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 BAMF_3532 eb76a720bde1f92cf33b753e3038f94a 346 Pfam PF03481 Putative GTP-binding controlling metal-binding 205 341 4.5E-26 T 12-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain BAMF_3532 eb76a720bde1f92cf33b753e3038f94a 346 Gene3D G3DSA:3.40.50.11030 221 346 2.4E-39 T 12-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily BAMF_2687 d66525ab15262da82f82f0c2af87519f 361 Gene3D G3DSA:3.40.630.10 12 345 2.6E-139 T 12-10-2018 BAMF_2687 d66525ab15262da82f82f0c2af87519f 361 SUPERFAMILY SSF101821 73 182 8.39E-34 T 12-10-2018 BAMF_2687 d66525ab15262da82f82f0c2af87519f 361 PIRSF PIRSF001123 4 361 3.6E-149 T 12-10-2018 IPR008007 Peptidase M42 BAMF_2687 d66525ab15262da82f82f0c2af87519f 361 Pfam PF05343 M42 glutamyl aminopeptidase 48 342 2.3E-117 T 12-10-2018 IPR008007 Peptidase M42 BAMF_2687 d66525ab15262da82f82f0c2af87519f 361 SUPERFAMILY SSF53187 6 358 1.77E-73 T 12-10-2018 BAMF_2687 d66525ab15262da82f82f0c2af87519f 361 Gene3D G3DSA:2.40.30.40 77 164 2.6E-139 T 12-10-2018 IPR023367 Peptidase M42, domain 2 BAMF_3048 03d56bac4bc9bcb4c192c69b3229890a 413 SUPERFAMILY SSF53187 15 412 2.46E-81 T 12-10-2018 BAMF_3048 03d56bac4bc9bcb4c192c69b3229890a 413 Pfam PF01546 Peptidase family M20/M25/M40 81 409 4.0E-31 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BAMF_3048 03d56bac4bc9bcb4c192c69b3229890a 413 PIRSF PIRSF001235 8 413 4.6E-142 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 BAMF_3048 03d56bac4bc9bcb4c192c69b3229890a 413 SUPERFAMILY SSF55031 216 332 7.15E-23 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BAMF_3048 03d56bac4bc9bcb4c192c69b3229890a 413 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 13 411 8.4E-136 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 BAMF_3048 03d56bac4bc9bcb4c192c69b3229890a 413 Gene3D G3DSA:3.40.630.10 23 404 1.0E-132 T 12-10-2018 BAMF_3048 03d56bac4bc9bcb4c192c69b3229890a 413 Gene3D G3DSA:3.30.70.360 216 330 1.0E-132 T 12-10-2018 BAMF_0189 608b04962822d82b3850f0b31cc425df 165 Pfam PF03788 LrgA family 49 139 3.0E-27 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 BAMF_1194 fc63bb32f4985aad6a95189ff75dde41 258 PRINTS PR00474 Glutamate 5-kinase family signature 32 46 3.5E-5 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BAMF_1194 fc63bb32f4985aad6a95189ff75dde41 258 PRINTS PR00474 Glutamate 5-kinase family signature 158 185 3.5E-5 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BAMF_1194 fc63bb32f4985aad6a95189ff75dde41 258 PRINTS PR00474 Glutamate 5-kinase family signature 126 147 3.5E-5 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BAMF_1194 fc63bb32f4985aad6a95189ff75dde41 258 Gene3D G3DSA:3.40.1160.10 1 239 1.1E-74 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BAMF_1194 fc63bb32f4985aad6a95189ff75dde41 258 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 232 1.0E-83 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BAMF_1194 fc63bb32f4985aad6a95189ff75dde41 258 Pfam PF00696 Amino acid kinase family 3 234 4.5E-41 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BAMF_1194 fc63bb32f4985aad6a95189ff75dde41 258 PIRSF PIRSF000728 1 255 1.6E-87 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BAMF_1194 fc63bb32f4985aad6a95189ff75dde41 258 Hamap MF_00082 Acetylglutamate kinase [argB]. 2 244 40.539 T 12-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BAMF_1194 fc63bb32f4985aad6a95189ff75dde41 258 SUPERFAMILY SSF53633 2 253 4.58E-65 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BAMF_0803 8746b63de25da9b90d325b275f32d4fb 160 Pfam PF01047 MarR family 48 105 4.3E-19 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0803 8746b63de25da9b90d325b275f32d4fb 160 Gene3D G3DSA:1.10.10.10 19 157 4.4E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0803 8746b63de25da9b90d325b275f32d4fb 160 SMART SM00347 40 140 7.6E-34 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0803 8746b63de25da9b90d325b275f32d4fb 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 96 1.3E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0803 8746b63de25da9b90d325b275f32d4fb 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 80 1.3E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0803 8746b63de25da9b90d325b275f32d4fb 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 130 150 1.3E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0803 8746b63de25da9b90d325b275f32d4fb 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 116 1.3E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0803 8746b63de25da9b90d325b275f32d4fb 160 SUPERFAMILY SSF46785 24 155 3.62E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1980 7c0864374e3d3afd46f89ea7ad4c2339 188 Gene3D G3DSA:1.10.357.10 52 185 7.7E-27 T 12-10-2018 BAMF_1980 7c0864374e3d3afd46f89ea7ad4c2339 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 46 5.3E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_1980 7c0864374e3d3afd46f89ea7ad4c2339 188 SUPERFAMILY SSF48498 79 183 1.25E-18 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BAMF_1980 7c0864374e3d3afd46f89ea7ad4c2339 188 SUPERFAMILY SSF46689 8 70 3.75E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_1980 7c0864374e3d3afd46f89ea7ad4c2339 188 Pfam PF13305 WHG domain 85 157 1.3E-13 T 12-10-2018 IPR025996 WHG domain BAMF_1980 7c0864374e3d3afd46f89ea7ad4c2339 188 Gene3D G3DSA:1.10.10.60 1 50 4.4E-19 T 12-10-2018 BAMF_3295 7f22ab8889c25d6df9a4d4b3aae262fd 256 Gene3D G3DSA:3.60.15.10 26 250 1.9E-47 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_3295 7f22ab8889c25d6df9a4d4b3aae262fd 256 Pfam PF00753 Metallo-beta-lactamase superfamily 43 230 2.0E-26 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_3295 7f22ab8889c25d6df9a4d4b3aae262fd 256 SMART SM00849 39 230 4.2E-32 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_3295 7f22ab8889c25d6df9a4d4b3aae262fd 256 SUPERFAMILY SSF56281 34 245 3.54E-49 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_2298 69376c1a82a8a037a8fe8657219b8625 143 Gene3D G3DSA:3.40.30.10 23 140 2.6E-55 T 12-10-2018 BAMF_2298 69376c1a82a8a037a8fe8657219b8625 143 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 6 140 6.2E-64 T 12-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family BAMF_2298 69376c1a82a8a037a8fe8657219b8625 143 Pfam PF06491 Disulphide isomerase 6 140 3.6E-63 T 12-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family BAMF_1257 e76a41a881f4b4e11db1a7cd90ea3b15 761 Pfam PF13361 UvrD-like helicase C-terminal domain 658 732 1.4E-22 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BAMF_1257 e76a41a881f4b4e11db1a7cd90ea3b15 761 Gene3D G3DSA:3.40.50.300 410 747 3.2E-76 T 12-10-2018 BAMF_1257 e76a41a881f4b4e11db1a7cd90ea3b15 761 Gene3D G3DSA:1.10.10.160 243 315 6.2E-83 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily BAMF_1257 e76a41a881f4b4e11db1a7cd90ea3b15 761 Gene3D G3DSA:1.10.486.10 511 661 3.2E-76 T 12-10-2018 BAMF_1257 e76a41a881f4b4e11db1a7cd90ea3b15 761 Pfam PF00580 UvrD/REP helicase N-terminal domain 137 400 8.7E-63 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BAMF_1257 e76a41a881f4b4e11db1a7cd90ea3b15 761 Gene3D G3DSA:3.40.50.300 137 401 6.2E-83 T 12-10-2018 BAMF_1257 e76a41a881f4b4e11db1a7cd90ea3b15 761 Pfam PF13361 UvrD-like helicase C-terminal domain 405 545 9.7E-17 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BAMF_1257 e76a41a881f4b4e11db1a7cd90ea3b15 761 SUPERFAMILY SSF52540 135 752 3.0E-133 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1323 7b98d0497b1ac254026c9e8630d3d7a1 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 7.9E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_1323 7b98d0497b1ac254026c9e8630d3d7a1 223 Gene3D G3DSA:1.10.10.10 119 223 6.9E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1323 7b98d0497b1ac254026c9e8630d3d7a1 223 SMART SM00448 2 110 1.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_1323 7b98d0497b1ac254026c9e8630d3d7a1 223 SUPERFAMILY SSF52172 3 116 1.57E-28 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_1323 7b98d0497b1ac254026c9e8630d3d7a1 223 Pfam PF00072 Response regulator receiver domain 4 110 4.3E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_1323 7b98d0497b1ac254026c9e8630d3d7a1 223 Gene3D G3DSA:3.40.50.2300 1 118 1.8E-27 T 12-10-2018 BAMF_1323 7b98d0497b1ac254026c9e8630d3d7a1 223 SUPERFAMILY SSF46894 127 221 3.68E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BAMF_1323 7b98d0497b1ac254026c9e8630d3d7a1 223 SMART SM00862 145 221 3.3E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_1578 144d419c14e611baeb9772cf257b8f04 259 SUPERFAMILY SSF52151 3 251 7.59E-55 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BAMF_1578 144d419c14e611baeb9772cf257b8f04 259 ProSitePatterns PS01237 Uncharacterized protein family UPF0028 signature. 11 43 - T 12-10-2018 IPR001423 Lysophospholipase patatin, conserved site GO:0004622|GO:0046470 Reactome: R-HSA-6814848 BAMF_1578 144d419c14e611baeb9772cf257b8f04 259 Pfam PF01734 Patatin-like phospholipase 8 164 9.1E-23 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 BAMF_1578 144d419c14e611baeb9772cf257b8f04 259 Gene3D G3DSA:3.40.1090.10 99 215 1.2E-19 T 12-10-2018 BAMF_1578 144d419c14e611baeb9772cf257b8f04 259 Gene3D G3DSA:3.40.1090.10 1 98 8.0E-25 T 12-10-2018 BAMF_3074 27c63e283e9694a656bb7e59041b66ed 854 SUPERFAMILY SSF51126 117 407 1.16E-33 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BAMF_3074 27c63e283e9694a656bb7e59041b66ed 854 Gene3D G3DSA:4.10.80.40 740 778 1.7E-61 T 12-10-2018 BAMF_3074 27c63e283e9694a656bb7e59041b66ed 854 Gene3D G3DSA:2.40.300.10 687 848 1.7E-61 T 12-10-2018 BAMF_3074 27c63e283e9694a656bb7e59041b66ed 854 SMART SM00710 487 509 1200.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_3074 27c63e283e9694a656bb7e59041b66ed 854 SMART SM00710 276 298 2400.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_3074 27c63e283e9694a656bb7e59041b66ed 854 SMART SM00710 333 354 610.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_3074 27c63e283e9694a656bb7e59041b66ed 854 SMART SM00710 299 331 350.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_3074 27c63e283e9694a656bb7e59041b66ed 854 SMART SM00710 238 260 3300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_3074 27c63e283e9694a656bb7e59041b66ed 854 SMART SM00710 396 422 8200.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BAMF_3074 27c63e283e9694a656bb7e59041b66ed 854 Gene3D G3DSA:2.160.20.10 108 566 2.7E-123 T 12-10-2018 IPR012334 Pectin lyase fold BAMF_3074 27c63e283e9694a656bb7e59041b66ed 854 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 633 850 7.8E-73 T 12-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain BAMF_3074 27c63e283e9694a656bb7e59041b66ed 854 Pfam PF12708 Pectate lyase superfamily protein 120 346 1.4E-17 T 12-10-2018 IPR024535 Pectate lyase superfamily protein BAMF_3668 51e4830ef0e86d5af1a0baa192081bab 302 SUPERFAMILY SSF53850 90 292 7.71E-46 T 12-10-2018 BAMF_3668 51e4830ef0e86d5af1a0baa192081bab 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.3E-22 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3668 51e4830ef0e86d5af1a0baa192081bab 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.7E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3668 51e4830ef0e86d5af1a0baa192081bab 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.7E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3668 51e4830ef0e86d5af1a0baa192081bab 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.7E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_3668 51e4830ef0e86d5af1a0baa192081bab 302 Gene3D G3DSA:1.10.10.10 1 92 2.5E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3668 51e4830ef0e86d5af1a0baa192081bab 302 SUPERFAMILY SSF46785 1 111 5.92E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3668 51e4830ef0e86d5af1a0baa192081bab 302 Gene3D G3DSA:3.40.190.290 93 296 2.3E-59 T 12-10-2018 BAMF_3668 51e4830ef0e86d5af1a0baa192081bab 302 Pfam PF03466 LysR substrate binding domain 90 290 8.6E-50 T 12-10-2018 IPR005119 LysR, substrate-binding BAMF_1374 8ebac466537431b50f01090eec1e5ce5 438 Pfam PF13520 Amino acid permease 16 408 6.0E-56 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_1374 8ebac466537431b50f01090eec1e5ce5 438 PIRSF PIRSF006060 1 438 1.8E-79 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_1374 8ebac466537431b50f01090eec1e5ce5 438 Gene3D G3DSA:1.20.1740.10 7 438 1.7E-92 T 12-10-2018 BAMF_2694 48de2f2148fb21b10b6d9c19b51d58dc 146 Pfam PF03788 LrgA family 21 112 1.6E-23 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 BAMF_2694 48de2f2148fb21b10b6d9c19b51d58dc 146 SUPERFAMILY SSF90123 68 129 8.11E-5 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_2329 c634095421165b223002575df3eab89e 149 SUPERFAMILY SSF55252 80 148 1.57E-22 T 12-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 BAMF_2329 c634095421165b223002575df3eab89e 149 PRINTS PR01467 Bacterial arginine repressor signature 118 133 3.9E-29 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BAMF_2329 c634095421165b223002575df3eab89e 149 PRINTS PR01467 Bacterial arginine repressor signature 21 34 3.9E-29 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BAMF_2329 c634095421165b223002575df3eab89e 149 PRINTS PR01467 Bacterial arginine repressor signature 37 52 3.9E-29 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BAMF_2329 c634095421165b223002575df3eab89e 149 PRINTS PR01467 Bacterial arginine repressor signature 88 101 3.9E-29 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BAMF_2329 c634095421165b223002575df3eab89e 149 Gene3D G3DSA:3.30.1360.40 68 149 1.9E-34 T 12-10-2018 BAMF_2329 c634095421165b223002575df3eab89e 149 Hamap MF_00173 Arginine repressor [argR]. 1 149 72.408 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BAMF_2329 c634095421165b223002575df3eab89e 149 SUPERFAMILY SSF46785 1 70 1.22E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2329 c634095421165b223002575df3eab89e 149 Pfam PF01316 Arginine repressor, DNA binding domain 1 70 1.1E-30 T 12-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 BAMF_2329 c634095421165b223002575df3eab89e 149 Pfam PF02863 Arginine repressor, C-terminal domain 81 145 4.4E-28 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 BAMF_2329 c634095421165b223002575df3eab89e 149 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 149 6.2E-59 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BAMF_2329 c634095421165b223002575df3eab89e 149 Gene3D G3DSA:1.10.10.10 4 67 6.8E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2329 c634095421165b223002575df3eab89e 149 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 87 149 8.0E-29 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 BAMF_0140 608809e732b4bd5a9ebf3fc55cc4543b 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.611 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0140 608809e732b4bd5a9ebf3fc55cc4543b 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 5.8E-24 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0140 608809e732b4bd5a9ebf3fc55cc4543b 37 Pfam PF00444 Ribosomal protein L36 1 37 3.2E-19 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0140 608809e732b4bd5a9ebf3fc55cc4543b 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 2.0E-8 T 12-10-2018 BAMF_0140 608809e732b4bd5a9ebf3fc55cc4543b 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0140 608809e732b4bd5a9ebf3fc55cc4543b 37 SUPERFAMILY SSF57840 1 37 6.28E-17 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3235 221856e065ad3069ec02471ba2d06209 217 SUPERFAMILY SSF161098 13 198 7.59E-40 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3235 221856e065ad3069ec02471ba2d06209 217 Gene3D G3DSA:1.10.3720.10 14 208 1.7E-33 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3235 221856e065ad3069ec02471ba2d06209 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 198 1.5E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_2520 3b244a80365952b36ea0c6bf4b2dd9f2 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_2520 3b244a80365952b36ea0c6bf4b2dd9f2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_2520 3b244a80365952b36ea0c6bf4b2dd9f2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_2520 3b244a80365952b36ea0c6bf4b2dd9f2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_2520 3b244a80365952b36ea0c6bf4b2dd9f2 294 Gene3D G3DSA:3.40.190.290 92 293 3.5E-54 T 12-10-2018 BAMF_2520 3b244a80365952b36ea0c6bf4b2dd9f2 294 Gene3D G3DSA:1.10.10.10 1 91 2.2E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2520 3b244a80365952b36ea0c6bf4b2dd9f2 294 SUPERFAMILY SSF46785 1 82 6.53E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2520 3b244a80365952b36ea0c6bf4b2dd9f2 294 Pfam PF03466 LysR substrate binding domain 89 288 7.7E-45 T 12-10-2018 IPR005119 LysR, substrate-binding BAMF_2520 3b244a80365952b36ea0c6bf4b2dd9f2 294 SUPERFAMILY SSF53850 90 291 7.47E-40 T 12-10-2018 BAMF_2800 bd4743757482169eff829c6071947777 234 Gene3D G3DSA:3.40.50.300 3 226 2.6E-50 T 12-10-2018 BAMF_2800 bd4743757482169eff829c6071947777 234 Pfam PF00005 ABC transporter 22 153 9.1E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_2800 bd4743757482169eff829c6071947777 234 SMART SM00382 30 201 4.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2800 bd4743757482169eff829c6071947777 234 SUPERFAMILY SSF52540 10 216 4.55E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0575 8336ea3ccfd82f01598649e6026ebd85 70 Pfam PF12728 Helix-turn-helix domain 19 69 2.2E-7 T 12-10-2018 BAMF_0330 65b19dd60a6d2a1116483002ae450f3c 546 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 48 507 1.9E-193 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BAMF_0330 65b19dd60a6d2a1116483002ae450f3c 546 PIRSF PIRSF005690 33 523 1.7E-197 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BAMF_0105 4b262c4e56ac9c79fea9c34bb4db9fd5 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 2.1E-30 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0105 4b262c4e56ac9c79fea9c34bb4db9fd5 123 Gene3D G3DSA:3.30.1390.10 54 123 1.3E-30 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BAMF_0105 4b262c4e56ac9c79fea9c34bb4db9fd5 123 Gene3D G3DSA:1.20.5.710 3 53 4.9E-20 T 12-10-2018 BAMF_0105 4b262c4e56ac9c79fea9c34bb4db9fd5 123 SUPERFAMILY SSF48300 4 58 3.92E-16 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0105 4b262c4e56ac9c79fea9c34bb4db9fd5 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 1.3E-51 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0105 4b262c4e56ac9c79fea9c34bb4db9fd5 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 5.1E-20 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0105 4b262c4e56ac9c79fea9c34bb4db9fd5 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 25.469 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0105 4b262c4e56ac9c79fea9c34bb4db9fd5 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 96 7.0E-15 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0105 4b262c4e56ac9c79fea9c34bb4db9fd5 123 SUPERFAMILY SSF54736 52 123 1.05E-24 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BAMF_2826 dcb4ed0e5cc4476dc82a16a0e2fd8930 328 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 92 106 1.1E-41 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BAMF_2826 dcb4ed0e5cc4476dc82a16a0e2fd8930 328 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 169 181 1.1E-41 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BAMF_2826 dcb4ed0e5cc4476dc82a16a0e2fd8930 328 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 152 166 1.1E-41 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BAMF_2826 dcb4ed0e5cc4476dc82a16a0e2fd8930 328 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 241 255 1.1E-41 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BAMF_2826 dcb4ed0e5cc4476dc82a16a0e2fd8930 328 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 261 280 1.1E-41 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BAMF_2826 dcb4ed0e5cc4476dc82a16a0e2fd8930 328 Pfam PF12730 ABC-2 family transporter protein 6 179 6.2E-7 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 BAMF_3678 0fff2ad35a5b35ca4056ae8195cd913f 280 Gene3D G3DSA:3.90.550.10 1 272 1.4E-75 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3678 0fff2ad35a5b35ca4056ae8195cd913f 280 Pfam PF01501 Glycosyl transferase family 8 2 250 2.4E-59 T 12-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 BAMF_3678 0fff2ad35a5b35ca4056ae8195cd913f 280 SUPERFAMILY SSF53448 1 271 5.62E-66 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_1908 57fc6c132c3ea8e65cb426039f7f922b 235 Gene3D G3DSA:3.40.50.2300 1 131 1.7E-34 T 12-10-2018 BAMF_1908 57fc6c132c3ea8e65cb426039f7f922b 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 8.2E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_1908 57fc6c132c3ea8e65cb426039f7f922b 235 SMART SM00448 6 117 2.2E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_1908 57fc6c132c3ea8e65cb426039f7f922b 235 Gene3D G3DSA:1.10.10.10 132 235 1.0E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1908 57fc6c132c3ea8e65cb426039f7f922b 235 SUPERFAMILY SSF52172 6 187 5.29E-37 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_1908 57fc6c132c3ea8e65cb426039f7f922b 235 SMART SM00862 154 230 7.9E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BAMF_1908 57fc6c132c3ea8e65cb426039f7f922b 235 Pfam PF00072 Response regulator receiver domain 8 116 1.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2347 05715bea82a9f0bcbec23a4326a21da8 307 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 28 291 4.9E-124 T 12-10-2018 IPR014217 Sporulation stage III, protein AA BAMF_2347 05715bea82a9f0bcbec23a4326a21da8 307 SMART SM00382 135 272 7.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2347 05715bea82a9f0bcbec23a4326a21da8 307 SUPERFAMILY SSF52540 26 260 1.13E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2347 05715bea82a9f0bcbec23a4326a21da8 307 Gene3D G3DSA:3.40.50.300 117 271 1.4E-24 T 12-10-2018 BAMF_2068 1e038c0dbdc766862a30d43004444dde 142 Pfam PF14184 Regulatory protein YrvL 19 138 9.6E-17 T 12-10-2018 IPR025912 Regulatory protein YrvL BAMF_2068 1e038c0dbdc766862a30d43004444dde 142 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 39 133 5.0E-5 T 12-10-2018 BAMF_1007 ebc0ea0a362a72c1b8460576d80b4641 274 SUPERFAMILY SSF53850 29 264 9.9E-48 T 12-10-2018 BAMF_1007 ebc0ea0a362a72c1b8460576d80b4641 274 Pfam PF03180 NLPA lipoprotein 30 262 8.0E-57 T 12-10-2018 IPR004872 Lipoprotein NlpA family BAMF_1007 ebc0ea0a362a72c1b8460576d80b4641 274 Gene3D G3DSA:3.40.190.10 107 214 1.6E-56 T 12-10-2018 BAMF_1007 ebc0ea0a362a72c1b8460576d80b4641 274 Gene3D G3DSA:3.40.190.10 31 253 1.6E-56 T 12-10-2018 BAMF_1775 3128ad5dfbe0e22f1ff9e77700531916 181 Pfam PF10628 Outer spore coat protein E (CotE) 3 175 6.2E-68 T 12-10-2018 IPR018901 Spore coat protein CotE BAMF_2869 e4fb3df67ab9913b044915078725863c 162 SUPERFAMILY SSF109854 2 158 1.68E-30 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BAMF_2869 e4fb3df67ab9913b044915078725863c 162 Gene3D G3DSA:1.20.120.450 1 160 2.6E-36 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BAMF_2869 e4fb3df67ab9913b044915078725863c 162 Pfam PF12867 DinB superfamily 4 152 3.7E-23 T 12-10-2018 IPR024775 DinB-like domain BAMF_0137 45af4af0ea2e10be2523c41184cca9ff 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BAMF_0137 45af4af0ea2e10be2523c41184cca9ff 217 Gene3D G3DSA:3.40.50.300 1 213 4.1E-85 T 12-10-2018 BAMF_0137 45af4af0ea2e10be2523c41184cca9ff 217 Pfam PF05191 Adenylate kinase, active site lid 127 162 1.6E-16 T 12-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 BAMF_0137 45af4af0ea2e10be2523c41184cca9ff 217 Pfam PF00406 Adenylate kinase 5 190 1.4E-61 T 12-10-2018 BAMF_0137 45af4af0ea2e10be2523c41184cca9ff 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 3.7E-82 T 12-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 BAMF_0137 45af4af0ea2e10be2523c41184cca9ff 217 PRINTS PR00094 Adenylate kinase signature 160 175 1.3E-33 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BAMF_0137 45af4af0ea2e10be2523c41184cca9ff 217 PRINTS PR00094 Adenylate kinase signature 4 17 1.3E-33 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BAMF_0137 45af4af0ea2e10be2523c41184cca9ff 217 PRINTS PR00094 Adenylate kinase signature 32 46 1.3E-33 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BAMF_0137 45af4af0ea2e10be2523c41184cca9ff 217 PRINTS PR00094 Adenylate kinase signature 81 97 1.3E-33 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BAMF_0137 45af4af0ea2e10be2523c41184cca9ff 217 PRINTS PR00094 Adenylate kinase signature 177 191 1.3E-33 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BAMF_0137 45af4af0ea2e10be2523c41184cca9ff 217 SUPERFAMILY SSF52540 1 213 1.78E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0137 45af4af0ea2e10be2523c41184cca9ff 217 Hamap MF_00235 Adenylate kinase [adk]. 1 213 54.181 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BAMF_0147 123dacc10d06e54f8a4c4fff730f1615 265 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 2 265 38.64 T 12-10-2018 IPR024919 ECF transporter transmembrane protein EcfT GO:0016021|GO:0022857|GO:0055085 BAMF_0147 123dacc10d06e54f8a4c4fff730f1615 265 Pfam PF02361 Cobalt transport protein 14 237 6.9E-63 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component BAMF_2007 46a67e1aa038c5ee804b8592dfc0f273 280 SUPERFAMILY SSF56281 20 233 1.31E-42 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_2007 46a67e1aa038c5ee804b8592dfc0f273 280 Pfam PF00753 Metallo-beta-lactamase superfamily 23 216 1.2E-19 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_2007 46a67e1aa038c5ee804b8592dfc0f273 280 SMART SM00849 19 224 2.0E-28 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_2007 46a67e1aa038c5ee804b8592dfc0f273 280 Gene3D G3DSA:3.60.15.10 16 253 6.0E-43 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_2474 35e4d5849b93b21aa1a8f8aaad3eb2c7 604 SUPERFAMILY SSF52540 6 390 8.99E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2474 35e4d5849b93b21aa1a8f8aaad3eb2c7 604 Gene3D G3DSA:3.40.50.300 5 407 2.4E-26 T 12-10-2018 BAMF_2474 35e4d5849b93b21aa1a8f8aaad3eb2c7 604 Pfam PF13175 AAA ATPase domain 8 387 1.0E-46 T 12-10-2018 BAMF_1941 e5f81a158cacc3dceb135557c47c0e51 322 SUPERFAMILY SSF74650 15 316 4.08E-56 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BAMF_1941 e5f81a158cacc3dceb135557c47c0e51 322 Gene3D G3DSA:2.70.98.10 1 321 3.5E-117 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BAMF_1941 e5f81a158cacc3dceb135557c47c0e51 322 Pfam PF01263 Aldose 1-epimerase 17 315 2.1E-52 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 BAMF_2243 cc2c9bbd57151228e7a2ad29423b547f 389 Gene3D G3DSA:2.60.410.10 280 370 7.7E-20 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_2243 cc2c9bbd57151228e7a2ad29423b547f 389 SUPERFAMILY SSF56601 1 280 7.52E-80 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_2243 cc2c9bbd57151228e7a2ad29423b547f 389 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 371 1.1E-18 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_2243 cc2c9bbd57151228e7a2ad29423b547f 389 SMART SM00936 280 371 1.3E-25 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_2243 cc2c9bbd57151228e7a2ad29423b547f 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 260 2.3E-91 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 BAMF_2243 cc2c9bbd57151228e7a2ad29423b547f 389 Gene3D G3DSA:3.40.710.10 19 279 1.2E-90 T 12-10-2018 BAMF_2243 cc2c9bbd57151228e7a2ad29423b547f 389 SUPERFAMILY SSF69189 280 373 1.28E-21 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_2243 cc2c9bbd57151228e7a2ad29423b547f 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 8.3E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BAMF_2243 cc2c9bbd57151228e7a2ad29423b547f 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 8.3E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BAMF_2243 cc2c9bbd57151228e7a2ad29423b547f 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 8.3E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BAMF_3302 29abce530743ef41d34dafaf86ac5074 104 Gene3D G3DSA:3.10.450.130 32 100 3.4E-9 T 12-10-2018 BAMF_3302 29abce530743ef41d34dafaf86ac5074 104 Pfam PF07252 Protein of unknown function (DUF1433) 36 89 1.2E-9 T 12-10-2018 IPR009881 Protein of unknown function DUF1433 BAMF_3829 59082e356986f15148ecbef61eced6c7 204 SUPERFAMILY SSF53448 1 195 1.98E-21 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3829 59082e356986f15148ecbef61eced6c7 204 Gene3D G3DSA:3.90.550.10 1 202 6.7E-39 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3829 59082e356986f15148ecbef61eced6c7 204 Pfam PF12804 MobA-like NTP transferase domain 5 171 5.4E-29 T 12-10-2018 IPR025877 MobA-like NTP transferase BAMF_3567 d0f90d08d42864de12f3926e441cce96 396 Gene3D G3DSA:1.20.1250.20 3 180 1.6E-38 T 12-10-2018 BAMF_3567 d0f90d08d42864de12f3926e441cce96 396 Pfam PF07690 Major Facilitator Superfamily 16 341 1.8E-43 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_3567 d0f90d08d42864de12f3926e441cce96 396 Gene3D G3DSA:1.20.1250.20 186 392 1.3E-47 T 12-10-2018 BAMF_3567 d0f90d08d42864de12f3926e441cce96 396 SUPERFAMILY SSF103473 7 386 2.09E-61 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_1023 1daf192b2b029e8d83deda62faacf8b2 191 Gene3D G3DSA:3.20.20.400 1 188 6.2E-70 T 12-10-2018 IPR035928 GlpP-like superfamily BAMF_1023 1daf192b2b029e8d83deda62faacf8b2 191 PIRSF PIRSF016897 1 186 4.6E-68 T 12-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 BAMF_1023 1daf192b2b029e8d83deda62faacf8b2 191 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 8 180 1.6E-63 T 12-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 BAMF_1023 1daf192b2b029e8d83deda62faacf8b2 191 SUPERFAMILY SSF110391 8 180 2.62E-60 T 12-10-2018 IPR035928 GlpP-like superfamily BAMF_1341 3d116d240504112e4549f13953bd8d7e 265 Gene3D G3DSA:1.10.10.1400 63 127 3.1E-19 T 12-10-2018 IPR038713 Terminase small subunit, N-terminal domain superfamily BAMF_1341 3d116d240504112e4549f13953bd8d7e 265 Pfam PF10668 Phage terminase small subunit 5 51 9.8E-7 T 12-10-2018 IPR018925 Phage terminase small subunit BAMF_1341 3d116d240504112e4549f13953bd8d7e 265 Pfam PF03592 Terminase small subunit 67 234 1.1E-42 T 12-10-2018 IPR005335 Terminase small subunit GO:0006323 BAMF_0166 376303b226c9cd7ffcee196094cd1728 335 SUPERFAMILY SSF81345 3 327 6.15E-78 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_0166 376303b226c9cd7ffcee196094cd1728 335 Gene3D G3DSA:1.10.3470.10 3 333 2.1E-86 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_0166 376303b226c9cd7ffcee196094cd1728 335 Pfam PF01032 FecCD transport family 18 327 4.9E-86 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BAMF_2417 a3f146e67713fd25a38196719f0a8b42 120 PIRSF PIRSF000025 1 120 5.8E-39 T 12-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 BAMF_2417 a3f146e67713fd25a38196719f0a8b42 120 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 49 116 1.3E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_2417 a3f146e67713fd25a38196719f0a8b42 120 SUPERFAMILY SSF46626 7 118 1.39E-17 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BAMF_2417 a3f146e67713fd25a38196719f0a8b42 120 Gene3D G3DSA:1.10.760.10 50 120 1.2E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BAMF_2532 742b4e4f40a60c575e83c905c60661b5 76 ProDom PD057834 YRHC TRANSMEMBRANE MEMBRANE 1 76 2.0E-29 T 12-10-2018 IPR025418 YrhC-like protein BAMF_2532 742b4e4f40a60c575e83c905c60661b5 76 Pfam PF14143 YrhC-like protein 4 75 2.2E-27 T 12-10-2018 IPR025418 YrhC-like protein BAMF_2778 30dc194592d949b18b8f8b61c74819d0 140 Gene3D G3DSA:1.10.287.950 20 138 3.3E-5 T 12-10-2018 BAMF_2778 30dc194592d949b18b8f8b61c74819d0 140 Pfam PF06103 Bacterial protein of unknown function (DUF948) 8 94 4.0E-27 T 12-10-2018 IPR009293 Uncharacterised protein family UPF0478 BAMF_2778 30dc194592d949b18b8f8b61c74819d0 140 SUPERFAMILY SSF58104 27 128 7.32E-5 T 12-10-2018 BAMF_0097 40bbb16ab1280ce907f5daef2d0410da 170 Pfam PF05991 YacP-like NYN domain 4 166 1.5E-56 T 12-10-2018 IPR010298 Protein of unknown function DUF901 BAMF_0019 37008d6d82a1308ff3d06a9cda4ff126 160 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 89 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BAMF_0019 37008d6d82a1308ff3d06a9cda4ff126 160 Gene3D G3DSA:3.40.140.10 1 160 8.8E-63 T 12-10-2018 BAMF_0019 37008d6d82a1308ff3d06a9cda4ff126 160 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 7 148 47.324 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 BAMF_0019 37008d6d82a1308ff3d06a9cda4ff126 160 SUPERFAMILY SSF53927 2 152 8.03E-54 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BAMF_0019 37008d6d82a1308ff3d06a9cda4ff126 160 Pfam PF14437 MafB19-like deaminase 1 148 1.7E-41 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 BAMF_0767 0e1a8dc15269ce139edb80fad4094654 177 Pfam PF04055 Radical SAM superfamily 37 161 3.0E-10 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BAMF_0767 0e1a8dc15269ce139edb80fad4094654 177 TIGRFAM TIGR04478 rSAM_YfkAB: radical SAM/CxCxxxxC motif protein YfkAB 9 164 5.3E-81 T 12-10-2018 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB BAMF_0767 0e1a8dc15269ce139edb80fad4094654 177 Pfam PF13353 4Fe-4S single cluster domain 41 115 5.0E-6 T 12-10-2018 BAMF_0767 0e1a8dc15269ce139edb80fad4094654 177 Gene3D G3DSA:3.20.20.70 23 163 3.5E-15 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_0767 0e1a8dc15269ce139edb80fad4094654 177 SUPERFAMILY SSF102114 33 148 2.62E-18 T 12-10-2018 BAMF_3729 a8d2949580bc38c6a9f5b029f7df9a24 678 Gene3D G3DSA:3.40.50.300 6 403 1.4E-17 T 12-10-2018 BAMF_3729 a8d2949580bc38c6a9f5b029f7df9a24 678 SUPERFAMILY SSF52540 30 381 4.49E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3729 a8d2949580bc38c6a9f5b029f7df9a24 678 Pfam PF13175 AAA ATPase domain 7 378 7.9E-13 T 12-10-2018 BAMF_2390 ddf608befb893d8ee21c7bc42430bc32 184 PIRSF PIRSF006806 1 182 5.0E-53 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BAMF_2390 ddf608befb893d8ee21c7bc42430bc32 184 Gene3D G3DSA:3.40.50.10420 1 184 8.6E-65 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BAMF_2390 ddf608befb893d8ee21c7bc42430bc32 184 SUPERFAMILY SSF100950 2 183 3.21E-49 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BAMF_2390 ddf608befb893d8ee21c7bc42430bc32 184 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 2 179 1.2E-50 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BAMF_2390 ddf608befb893d8ee21c7bc42430bc32 184 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 2 179 1.3E-54 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BAMF_2424 ad2773e20b9e5f2487e1702011536d36 295 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 280 9.2E-147 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_2424 ad2773e20b9e5f2487e1702011536d36 295 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 288 1.9E-169 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_2424 ad2773e20b9e5f2487e1702011536d36 295 Gene3D G3DSA:1.20.58.180 205 285 2.1E-36 T 12-10-2018 BAMF_2424 ad2773e20b9e5f2487e1702011536d36 295 SUPERFAMILY SSF55681 1 280 3.23E-131 T 12-10-2018 BAMF_2424 ad2773e20b9e5f2487e1702011536d36 295 Gene3D G3DSA:3.30.930.10 1 204 2.5E-106 T 12-10-2018 BAMF_2424 ad2773e20b9e5f2487e1702011536d36 295 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 57.936 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_2424 ad2773e20b9e5f2487e1702011536d36 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 1.9E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_2424 ad2773e20b9e5f2487e1702011536d36 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 1.9E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_2424 ad2773e20b9e5f2487e1702011536d36 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 1.9E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_2424 ad2773e20b9e5f2487e1702011536d36 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 1.9E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_2424 ad2773e20b9e5f2487e1702011536d36 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 1.9E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_2424 ad2773e20b9e5f2487e1702011536d36 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 1.9E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BAMF_1070 b491e4ddbc36967d2f9bfceb90062f08 363 SUPERFAMILY SSF56059 107 328 1.05E-17 T 12-10-2018 BAMF_1070 b491e4ddbc36967d2f9bfceb90062f08 363 Pfam PF14398 YheC/D like ATP-grasp 98 344 4.3E-62 T 12-10-2018 IPR026838 Endospore coat-associated protein YheC/D BAMF_1591 271d9993a5a8e71ef63c652aa5124d7c 639 SUPERFAMILY SSF56601 171 569 3.07E-100 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_1591 271d9993a5a8e71ef63c652aa5124d7c 639 SUPERFAMILY SSF56519 52 220 1.44E-43 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BAMF_1591 271d9993a5a8e71ef63c652aa5124d7c 639 Pfam PF03793 PASTA domain 584 637 4.0E-14 T 12-10-2018 IPR005543 PASTA domain BAMF_1591 271d9993a5a8e71ef63c652aa5124d7c 639 Gene3D G3DSA:3.40.710.10 283 478 2.5E-111 T 12-10-2018 BAMF_1591 271d9993a5a8e71ef63c652aa5124d7c 639 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 201 5.5E-22 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BAMF_1591 271d9993a5a8e71ef63c652aa5124d7c 639 Gene3D G3DSA:3.30.10.20 579 637 2.6E-9 T 12-10-2018 BAMF_1591 271d9993a5a8e71ef63c652aa5124d7c 639 Gene3D G3DSA:3.90.1310.30 49 220 1.3E-44 T 12-10-2018 BAMF_1591 271d9993a5a8e71ef63c652aa5124d7c 639 Gene3D G3DSA:3.30.450.330 222 560 2.5E-111 T 12-10-2018 BAMF_1591 271d9993a5a8e71ef63c652aa5124d7c 639 Pfam PF00905 Penicillin binding protein transpeptidase domain 246 556 3.2E-87 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BAMF_1591 271d9993a5a8e71ef63c652aa5124d7c 639 SUPERFAMILY SSF54184 584 637 5.76E-11 T 12-10-2018 BAMF_1591 271d9993a5a8e71ef63c652aa5124d7c 639 TIGRFAM TIGR02214 spoVD_pbp: stage V sporulation protein D 11 637 4.7E-266 T 12-10-2018 IPR011927 Stage V sporulation protein D BAMF_1591 271d9993a5a8e71ef63c652aa5124d7c 639 SMART SM00740 580 638 2.5E-16 T 12-10-2018 IPR005543 PASTA domain BAMF_2990 93c48be8596075e662d511747ddb41cb 225 Pfam PF10042 Uncharacterized conserved protein (DUF2278) 1 212 2.1E-69 T 12-10-2018 IPR019268 Protein of unknown function DUF2278 BAMF_2845 e2bdb9c3e1e5463655ca0045c169a3b8 159 Gene3D G3DSA:3.90.79.10 1 158 5.2E-49 T 12-10-2018 BAMF_2845 e2bdb9c3e1e5463655ca0045c169a3b8 159 ProSitePatterns PS00893 Nudix box signature. 53 74 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BAMF_2845 e2bdb9c3e1e5463655ca0045c169a3b8 159 Pfam PF00293 NUDIX domain 28 87 1.1E-11 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BAMF_2845 e2bdb9c3e1e5463655ca0045c169a3b8 159 SUPERFAMILY SSF55811 28 122 4.87E-20 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BAMF_2845 e2bdb9c3e1e5463655ca0045c169a3b8 159 PRINTS PR00502 NUDIX hydrolase family signature 62 77 2.6E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BAMF_2845 e2bdb9c3e1e5463655ca0045c169a3b8 159 PRINTS PR00502 NUDIX hydrolase family signature 48 62 2.6E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BAMF_2845 e2bdb9c3e1e5463655ca0045c169a3b8 159 TIGRFAM TIGR02705 nudix_YtkD: nucleoside triphosphatase YtkD 3 156 2.1E-66 T 12-10-2018 IPR014078 Nucleoside triphosphatase YtkD MetaCyc: PWY-6502 BAMF_1611 9a65040c2ca11da1ef2d84d790495bf3 92 Pfam PF02325 YGGT family 12 78 1.8E-21 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 BAMF_2016 8bb803592283562c3b3f4384add16d44 453 Pfam PF01554 MatE 20 180 8.5E-35 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BAMF_2016 8bb803592283562c3b3f4384add16d44 453 Pfam PF01554 MatE 247 407 1.6E-37 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BAMF_2016 8bb803592283562c3b3f4384add16d44 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 421 4.2E-107 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BAMF_2016 8bb803592283562c3b3f4384add16d44 453 PIRSF PIRSF006603 2 452 4.8E-65 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BAMF_0285 d393964d29c1a1476f18675696e68d86 198 Pfam PF09347 Domain of unknown function (DUF1989) 6 172 4.5E-54 T 12-10-2018 IPR018959 Protein of unknown function DUF1989 BAMF_3844 0fc3f4185f8886d37c6b2a771e17ed5d 466 PIRSF PIRSF006060 1 465 7.7E-89 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_3844 0fc3f4185f8886d37c6b2a771e17ed5d 466 Gene3D G3DSA:1.20.1740.10 8 465 4.4E-78 T 12-10-2018 BAMF_3844 0fc3f4185f8886d37c6b2a771e17ed5d 466 ProSitePatterns PS00218 Amino acid permeases signature. 43 74 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BAMF_3844 0fc3f4185f8886d37c6b2a771e17ed5d 466 Pfam PF00324 Amino acid permease 18 461 4.7E-126 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BAMF_1126 085ef6bb1a977c2c460668f06133b226 139 Gene3D G3DSA:1.10.490.10 19 132 1.3E-25 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 BAMF_1126 085ef6bb1a977c2c460668f06133b226 139 Pfam PF11563 Protoglobin 30 114 1.6E-21 T 12-10-2018 BAMF_1126 085ef6bb1a977c2c460668f06133b226 139 SUPERFAMILY SSF46458 18 113 1.58E-21 T 12-10-2018 IPR009050 Globin-like superfamily BAMF_2152 50e9417a6185a79546e71fd9871ba275 391 TIGRFAM TIGR03404 bicupin_oxalic: bicupin, oxalate decarboxylase family 20 385 1.2E-176 T 12-10-2018 IPR017774 Bicupin, oxalate decarboxylase/oxidase GO:0033609 KEGG: 00630+4.1.1.2|MetaCyc: PWY-6698 BAMF_2152 50e9417a6185a79546e71fd9871ba275 391 Gene3D G3DSA:2.60.120.10 62 235 3.0E-168 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_2152 50e9417a6185a79546e71fd9871ba275 391 SMART SM00835 234 375 1.8E-32 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 BAMF_2152 50e9417a6185a79546e71fd9871ba275 391 SMART SM00835 56 198 9.6E-23 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 BAMF_2152 50e9417a6185a79546e71fd9871ba275 391 SUPERFAMILY SSF51182 15 384 1.86E-103 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BAMF_2152 50e9417a6185a79546e71fd9871ba275 391 Pfam PF00190 Cupin 67 194 5.4E-23 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 BAMF_2152 50e9417a6185a79546e71fd9871ba275 391 Pfam PF00190 Cupin 239 371 4.4E-22 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 BAMF_2152 50e9417a6185a79546e71fd9871ba275 391 Gene3D G3DSA:2.60.120.10 14 379 3.0E-168 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_3494 00152af44d9452a91e8cfb9ad893b974 191 SUPERFAMILY SSF48317 2 168 4.45E-36 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BAMF_3494 00152af44d9452a91e8cfb9ad893b974 191 SMART SM00014 53 160 5.7E-26 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BAMF_3494 00152af44d9452a91e8cfb9ad893b974 191 Pfam PF01569 PAP2 superfamily 54 163 3.3E-18 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BAMF_3494 00152af44d9452a91e8cfb9ad893b974 191 Gene3D G3DSA:1.20.144.10 81 189 6.4E-17 T 12-10-2018 BAMF_3497 6eab56e6728d0e157c735a78547e18e1 165 Pfam PF13420 Acetyltransferase (GNAT) domain 5 156 4.7E-17 T 12-10-2018 BAMF_3497 6eab56e6728d0e157c735a78547e18e1 165 Gene3D G3DSA:3.40.630.30 2 165 1.4E-49 T 12-10-2018 BAMF_3497 6eab56e6728d0e157c735a78547e18e1 165 SUPERFAMILY SSF55729 3 164 9.35E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_2947 5ba493d0787007b717e2f7eb31f8a6bd 232 SMART SM00479 32 209 7.2E-33 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BAMF_2947 5ba493d0787007b717e2f7eb31f8a6bd 232 Gene3D G3DSA:3.30.420.10 23 223 1.2E-38 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BAMF_2947 5ba493d0787007b717e2f7eb31f8a6bd 232 SUPERFAMILY SSF53098 33 205 7.05E-30 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BAMF_2947 5ba493d0787007b717e2f7eb31f8a6bd 232 Pfam PF00929 Exonuclease 34 200 1.3E-27 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BAMF_3509 ad51c162b13b8610c2a612c528f05d4b 262 Gene3D G3DSA:3.10.20.10 29 111 4.2E-15 T 12-10-2018 BAMF_3509 ad51c162b13b8610c2a612c528f05d4b 262 Pfam PF02634 FdhD/NarQ family 27 260 4.3E-80 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BAMF_3509 ad51c162b13b8610c2a612c528f05d4b 262 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 3 261 32.073 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BAMF_3509 ad51c162b13b8610c2a612c528f05d4b 262 SUPERFAMILY SSF53927 7 260 1.8E-78 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BAMF_3509 ad51c162b13b8610c2a612c528f05d4b 262 PIRSF PIRSF015626 1 262 1.4E-80 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BAMF_3509 ad51c162b13b8610c2a612c528f05d4b 262 Gene3D G3DSA:3.40.140.10 115 262 3.5E-49 T 12-10-2018 BAMF_3509 ad51c162b13b8610c2a612c528f05d4b 262 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 23 261 7.7E-92 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BAMF_3338 0df254e3b64a563e61be8af63ae5e833 213 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 184 7.8E-62 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BAMF_3338 0df254e3b64a563e61be8af63ae5e833 213 Pfam PF01634 ATP phosphoribosyltransferase 54 204 3.3E-49 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BAMF_3338 0df254e3b64a563e61be8af63ae5e833 213 Gene3D G3DSA:3.40.190.10 6 199 3.9E-80 T 12-10-2018 BAMF_3338 0df254e3b64a563e61be8af63ae5e833 213 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 143 164 - T 12-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 BAMF_3338 0df254e3b64a563e61be8af63ae5e833 213 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 4 208 57.191 T 12-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 BAMF_3338 0df254e3b64a563e61be8af63ae5e833 213 SUPERFAMILY SSF53850 3 207 7.82E-66 T 12-10-2018 BAMF_3338 0df254e3b64a563e61be8af63ae5e833 213 Gene3D G3DSA:3.40.190.10 95 176 3.9E-80 T 12-10-2018 BAMF_2853 80e7fcada051d8c8850d4008867f1098 82 Pfam PF01197 Ribosomal protein L31 1 79 2.6E-26 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2853 80e7fcada051d8c8850d4008867f1098 82 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 23.877 T 12-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2853 80e7fcada051d8c8850d4008867f1098 82 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.9E-17 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2853 80e7fcada051d8c8850d4008867f1098 82 PRINTS PR01249 Ribosomal protein L31 signature 60 78 4.9E-17 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2853 80e7fcada051d8c8850d4008867f1098 82 PRINTS PR01249 Ribosomal protein L31 signature 45 60 4.9E-17 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2853 80e7fcada051d8c8850d4008867f1098 82 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 2.6E-18 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2853 80e7fcada051d8c8850d4008867f1098 82 Gene3D G3DSA:2.30.170.50 1 82 1.5E-23 T 12-10-2018 BAMF_2853 80e7fcada051d8c8850d4008867f1098 82 SUPERFAMILY SSF143800 1 80 2.24E-22 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2853 80e7fcada051d8c8850d4008867f1098 82 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_3646 25c8227887f6f799c466033de3aef1c5 258 Pfam PF00881 Nitroreductase family 17 174 1.5E-19 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BAMF_3646 25c8227887f6f799c466033de3aef1c5 258 SUPERFAMILY SSF55469 10 256 3.01E-72 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BAMF_3646 25c8227887f6f799c466033de3aef1c5 258 PIRSF PIRSF005426 9 258 2.4E-95 T 12-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 BAMF_3646 25c8227887f6f799c466033de3aef1c5 258 Gene3D G3DSA:3.40.109.10 10 258 4.3E-77 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BAMF_0801 9ebaf6678d4899e4b09e182915986e7c 180 Gene3D G3DSA:1.20.120.450 2 178 4.5E-55 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BAMF_0801 9ebaf6678d4899e4b09e182915986e7c 180 SUPERFAMILY SSF109854 6 177 3.51E-52 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BAMF_0801 9ebaf6678d4899e4b09e182915986e7c 180 Hamap MF_01256 Putative metal-dependent hydrolase . 4 178 38.976 T 12-10-2018 IPR023774 Putative metal-dependent hydrolase YfiT BAMF_0801 9ebaf6678d4899e4b09e182915986e7c 180 Pfam PF12867 DinB superfamily 31 168 1.6E-17 T 12-10-2018 IPR024775 DinB-like domain BAMF_2345 3768f81ad738a589b451f88465d5f573 68 Pfam PF06686 Stage III sporulation protein AC/AD protein family 8 61 1.1E-15 T 12-10-2018 IPR025664 Stage III sporulation protein AC/AD family BAMF_2345 3768f81ad738a589b451f88465d5f573 68 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 3 66 2.7E-32 T 12-10-2018 IPR009570 Stage III sporulation protein AC BAMF_1608 5fafa1f3d247fc38462567084b41dea8 278 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 40 276 9.3E-67 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase BAMF_1608 5fafa1f3d247fc38462567084b41dea8 278 SUPERFAMILY SSF64438 27 276 2.93E-80 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic BAMF_1608 5fafa1f3d247fc38462567084b41dea8 278 Gene3D G3DSA:3.60.140.10 13 278 2.7E-90 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily BAMF_1608 5fafa1f3d247fc38462567084b41dea8 278 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 35 273 4.7E-70 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase BAMF_0462 de06900f4a3468858d6f8f60cb99d4dc 105 Pfam PF03551 Transcriptional regulator PadR-like family 17 82 1.3E-13 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal BAMF_0462 de06900f4a3468858d6f8f60cb99d4dc 105 Gene3D G3DSA:1.10.10.10 3 104 4.3E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0462 de06900f4a3468858d6f8f60cb99d4dc 105 SUPERFAMILY SSF46785 8 93 7.12E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3120 da9978e3717073de093eb94e9f4c8786 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 39.809 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 BAMF_3120 da9978e3717073de093eb94e9f4c8786 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BAMF_3120 da9978e3717073de093eb94e9f4c8786 127 SUPERFAMILY SSF51230 3 125 8.64E-46 T 12-10-2018 IPR011053 Single hybrid motif BAMF_3120 da9978e3717073de093eb94e9f4c8786 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 4.5E-60 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 BAMF_3120 da9978e3717073de093eb94e9f4c8786 127 Pfam PF01597 Glycine cleavage H-protein 8 126 5.4E-51 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate BAMF_3120 da9978e3717073de093eb94e9f4c8786 127 Gene3D G3DSA:2.40.50.100 2 127 7.1E-53 T 12-10-2018 BAMF_0068 7ca1b5c4e0011c852a76c93b46d0ea9f 179 Gene3D G3DSA:3.40.50.2020 1 179 5.0E-68 T 12-10-2018 BAMF_0068 7ca1b5c4e0011c852a76c93b46d0ea9f 179 Pfam PF00156 Phosphoribosyl transferase domain 14 159 1.5E-24 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BAMF_0068 7ca1b5c4e0011c852a76c93b46d0ea9f 179 SUPERFAMILY SSF53271 3 178 4.46E-60 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BAMF_0068 7ca1b5c4e0011c852a76c93b46d0ea9f 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 173 2.4E-71 T 12-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 BAMF_0715 5e89b57d08ae51be317522916ac28c6a 123 Pfam PF11486 Protein of unknown function (DUF3212) 12 122 7.2E-49 T 12-10-2018 IPR021579 Protein of unknown function DUF3212 BAMF_0715 5e89b57d08ae51be317522916ac28c6a 123 SUPERFAMILY SSF140688 11 123 1.07E-57 T 12-10-2018 IPR038074 YfmB domain superfamily BAMF_0715 5e89b57d08ae51be317522916ac28c6a 123 Gene3D G3DSA:1.10.8.570 11 123 1.4E-56 T 12-10-2018 IPR038074 YfmB domain superfamily BAMF_0121 c2e08b099ec161f5bc916bfefafbd392 113 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 2.8E-37 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 BAMF_0121 c2e08b099ec161f5bc916bfefafbd392 113 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 30.684 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0121 c2e08b099ec161f5bc916bfefafbd392 113 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.6E-54 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0121 c2e08b099ec161f5bc916bfefafbd392 113 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0121 c2e08b099ec161f5bc916bfefafbd392 113 Gene3D G3DSA:3.90.470.10 1 113 2.7E-51 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 BAMF_0121 c2e08b099ec161f5bc916bfefafbd392 113 SUPERFAMILY SSF54843 1 112 2.09E-44 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 BAMF_1553 c4c5560bfe851913d1508253cefa4885 69 Pfam PF09963 Uncharacterized protein conserved in bacteria (DUF2197) 1 56 8.2E-32 T 12-10-2018 IPR019241 Protein of unknown function DUF2197 BAMF_1441 92325af60f605da05799e7e5d162b378 404 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 119 288 1.3E-21 T 12-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 BAMF_1441 92325af60f605da05799e7e5d162b378 404 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 321 398 1.1E-15 T 12-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 BAMF_1441 92325af60f605da05799e7e5d162b378 404 TIGRFAM TIGR03332 salvage_mtnW: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase 2 399 1.5E-228 T 12-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 BAMF_1441 92325af60f605da05799e7e5d162b378 404 Hamap MF_01679 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [mtnW]. 2 399 60.389 T 12-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 BAMF_1441 92325af60f605da05799e7e5d162b378 404 Gene3D G3DSA:3.30.70.150 1 112 3.1E-31 T 12-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 BAMF_1441 92325af60f605da05799e7e5d162b378 404 SUPERFAMILY SSF54966 1 111 3.27E-31 T 12-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 BAMF_1441 92325af60f605da05799e7e5d162b378 404 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 3 92 3.1E-9 T 12-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 BAMF_1441 92325af60f605da05799e7e5d162b378 404 SUPERFAMILY SSF51649 114 401 4.97E-82 T 12-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 BAMF_1441 92325af60f605da05799e7e5d162b378 404 Gene3D G3DSA:3.20.20.110 114 404 1.7E-102 T 12-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 BAMF_0114 0f2a3847de1dabe98381f01cd322c4fe 320 Pfam PF12146 Serine aminopeptidase, S33 60 162 3.6E-12 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 BAMF_0114 0f2a3847de1dabe98381f01cd322c4fe 320 Gene3D G3DSA:3.40.50.1820 14 317 2.4E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_0114 0f2a3847de1dabe98381f01cd322c4fe 320 SUPERFAMILY SSF53474 26 315 7.91E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_0114 0f2a3847de1dabe98381f01cd322c4fe 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 7.0E-10 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BAMF_0114 0f2a3847de1dabe98381f01cd322c4fe 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 65 76 7.0E-10 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BAMF_0114 0f2a3847de1dabe98381f01cd322c4fe 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 113 127 7.0E-10 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BAMF_1568 43432cb8994d928f46461a55790dc520 119 Pfam PF08868 YugN-like family 5 90 8.1E-15 T 12-10-2018 IPR014967 Uncharacterised protein family, YugN-like BAMF_1568 43432cb8994d928f46461a55790dc520 119 Gene3D G3DSA:3.30.310.100 1 119 6.9E-44 T 12-10-2018 IPR036491 YugN-like superfamily BAMF_1568 43432cb8994d928f46461a55790dc520 119 SUPERFAMILY SSF160755 1 114 1.24E-37 T 12-10-2018 IPR036491 YugN-like superfamily BAMF_3694 b02416d6847b3a5486547fe68a31475d 342 Pfam PF01032 FecCD transport family 28 337 1.5E-86 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BAMF_3694 b02416d6847b3a5486547fe68a31475d 342 SUPERFAMILY SSF81345 16 337 8.5E-78 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_3694 b02416d6847b3a5486547fe68a31475d 342 Gene3D G3DSA:1.10.3470.10 16 341 1.6E-87 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_0340 63df33dc0b18e01eacf70d3b9383be30 227 Pfam PF00005 ABC transporter 22 167 2.7E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0340 63df33dc0b18e01eacf70d3b9383be30 227 Gene3D G3DSA:3.40.50.300 3 226 2.7E-56 T 12-10-2018 BAMF_0340 63df33dc0b18e01eacf70d3b9383be30 227 SUPERFAMILY SSF52540 18 216 6.51E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0340 63df33dc0b18e01eacf70d3b9383be30 227 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0340 63df33dc0b18e01eacf70d3b9383be30 227 SMART SM00382 30 224 3.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1392 5b997f07a59f96c09dfa8189f2707ab5 181 Pfam PF13302 Acetyltransferase (GNAT) domain 15 153 8.5E-35 T 12-10-2018 IPR000182 GNAT domain BAMF_1392 5b997f07a59f96c09dfa8189f2707ab5 181 SUPERFAMILY SSF55729 9 154 1.09E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_1392 5b997f07a59f96c09dfa8189f2707ab5 181 Gene3D G3DSA:3.40.630.30 1 173 3.5E-42 T 12-10-2018 BAMF_2253 3db41682951259de8849644dd3ed684b 468 Pfam PF03553 Na+/H+ antiporter family 159 451 7.0E-70 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BAMF_2253 3db41682951259de8849644dd3ed684b 468 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 5 458 3.1E-213 T 12-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 BAMF_1302 12501c11bc5534a377d51e6bf67338fd 57 Pfam PF14070 Putative motility protein 3 56 1.3E-11 T 12-10-2018 IPR025906 Putative motility protein BAMF_3118 9239a0365028f61e7007d2100f9cfc17 67 SUPERFAMILY SSF110455 17 66 1.7E-13 T 12-10-2018 BAMF_3118 9239a0365028f61e7007d2100f9cfc17 67 Gene3D G3DSA:3.40.1360.20 15 67 1.1E-13 T 12-10-2018 BAMF_2565 04558ab81ba2b867966d850488e59c26 592 Pfam PF01336 OB-fold nucleic acid binding domain 20 105 2.8E-17 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BAMF_2565 04558ab81ba2b867966d850488e59c26 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 123 560 5.5E-108 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2565 04558ab81ba2b867966d850488e59c26 592 Gene3D G3DSA:3.30.1360.30 278 422 5.2E-195 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 BAMF_2565 04558ab81ba2b867966d850488e59c26 592 Pfam PF02938 GAD domain 314 408 1.5E-31 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 BAMF_2565 04558ab81ba2b867966d850488e59c26 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 588 4.4E-271 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 BAMF_2565 04558ab81ba2b867966d850488e59c26 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 3 587 34.743 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 BAMF_2565 04558ab81ba2b867966d850488e59c26 592 SUPERFAMILY SSF55681 118 587 2.3E-106 T 12-10-2018 BAMF_2565 04558ab81ba2b867966d850488e59c26 592 Gene3D G3DSA:3.30.930.10 122 584 5.2E-195 T 12-10-2018 BAMF_2565 04558ab81ba2b867966d850488e59c26 592 SUPERFAMILY SSF50249 4 108 2.1E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_2565 04558ab81ba2b867966d850488e59c26 592 Gene3D G3DSA:2.40.50.140 1 109 1.2E-34 T 12-10-2018 BAMF_2565 04558ab81ba2b867966d850488e59c26 592 SUPERFAMILY SSF55261 295 422 1.59E-43 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 BAMF_2565 04558ab81ba2b867966d850488e59c26 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 1.3E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2565 04558ab81ba2b867966d850488e59c26 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 208 1.3E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2565 04558ab81ba2b867966d850488e59c26 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 1.3E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_2565 04558ab81ba2b867966d850488e59c26 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 213 226 1.3E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BAMF_1372 6dd2d5d24a76fe01141318778de177f9 332 Pfam PF01384 Phosphate transporter family 22 320 5.6E-91 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 BAMF_0964 cdc9373a51652c74546c3775d8f9017c 111 Pfam PF08863 YolD-like protein 13 106 6.9E-22 T 12-10-2018 IPR014962 YolD-like protein BAMF_2943 c18812f0e9bfc585bd26935abc431942 86 Pfam PF08958 Domain of unknown function (DUF1871) 10 85 6.4E-36 T 12-10-2018 IPR015053 Protein of unknown function DUF1871 BAMF_2943 c18812f0e9bfc585bd26935abc431942 86 Gene3D G3DSA:1.10.340.20 1 86 1.9E-31 T 12-10-2018 IPR023162 Apc36109-like domain superfamily BAMF_2943 c18812f0e9bfc585bd26935abc431942 86 ProDom PD062625 YUGE 10 85 6.0E-28 T 12-10-2018 IPR015053 Protein of unknown function DUF1871 BAMF_2943 c18812f0e9bfc585bd26935abc431942 86 SUPERFAMILY SSF116922 4 82 1.57E-28 T 12-10-2018 IPR023162 Apc36109-like domain superfamily BAMF_3589 b0dc776fa1a426ee135a40d5963b8251 306 Pfam PF00005 ABC transporter 22 162 1.5E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3589 b0dc776fa1a426ee135a40d5963b8251 306 SMART SM00382 30 210 7.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3589 b0dc776fa1a426ee135a40d5963b8251 306 SUPERFAMILY SSF52540 4 216 3.29E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3589 b0dc776fa1a426ee135a40d5963b8251 306 Gene3D G3DSA:3.40.50.300 1 237 3.4E-57 T 12-10-2018 BAMF_2146 7e0a0683bba7e6c5cb50e11be5975604 377 Pfam PF00534 Glycosyl transferases group 1 187 351 5.8E-42 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 BAMF_2146 7e0a0683bba7e6c5cb50e11be5975604 377 Gene3D G3DSA:3.40.50.2000 14 368 6.1E-133 T 12-10-2018 BAMF_2146 7e0a0683bba7e6c5cb50e11be5975604 377 SUPERFAMILY SSF53756 9 374 2.24E-87 T 12-10-2018 BAMF_2146 7e0a0683bba7e6c5cb50e11be5975604 377 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 4 373 2.5E-175 T 12-10-2018 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 BAMF_2146 7e0a0683bba7e6c5cb50e11be5975604 377 Gene3D G3DSA:3.40.50.2000 176 357 6.1E-133 T 12-10-2018 BAMF_2146 7e0a0683bba7e6c5cb50e11be5975604 377 Pfam PF13439 Glycosyltransferase Family 4 14 178 7.5E-27 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BAMF_2015 45e8cf926400dcdde72c5a92243bc474 208 Pfam PF10372 Bacterial membrane-spanning protein N-terminus 5 70 4.5E-21 T 12-10-2018 IPR019457 Uncharacterised domain YojJ, N-terminal BAMF_2015 45e8cf926400dcdde72c5a92243bc474 208 PIRSF PIRSF004793 1 208 2.5E-64 T 12-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 BAMF_2015 45e8cf926400dcdde72c5a92243bc474 208 Gene3D G3DSA:1.10.287.770 1 68 1.5E-12 T 12-10-2018 BAMF_2015 45e8cf926400dcdde72c5a92243bc474 208 SUPERFAMILY SSF143597 14 199 2.48E-51 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily BAMF_2015 45e8cf926400dcdde72c5a92243bc474 208 Hamap MF_00838 Diadenylate cyclase [dacB]. 15 201 34.781 T 12-10-2018 IPR034693 Diadenylate cyclase CdaS GO:0004016|GO:0006171 BAMF_2015 45e8cf926400dcdde72c5a92243bc474 208 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 79 194 2.1E-40 T 12-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal BAMF_2015 45e8cf926400dcdde72c5a92243bc474 208 Gene3D G3DSA:3.40.1700.10 69 208 1.3E-50 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily BAMF_2914 e6a3f0724a82fa53c9e37ade3df9b367 177 Gene3D G3DSA:1.10.260.40 1 85 1.8E-11 T 12-10-2018 BAMF_2914 e6a3f0724a82fa53c9e37ade3df9b367 177 Pfam PF01381 Helix-turn-helix 11 65 2.9E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_2914 e6a3f0724a82fa53c9e37ade3df9b367 177 SUPERFAMILY SSF47413 4 65 3.25E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_2208 45ca4303772f3adc65fea01b09e32a81 366 ProDom PD136539 TRANSCRIPTION SIGMA-X NEGATIVE ACTIVITY RSIX REPRESSOR MEMBRANE EFFECTOR REGULATION REGULATOR 1 361 2.0E-62 T 12-10-2018 BAMF_0692 e397bfea9be4b5a96606a8235e0e8826 170 SUPERFAMILY SSF46785 22 160 4.1E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0692 e397bfea9be4b5a96606a8235e0e8826 170 Gene3D G3DSA:1.10.10.10 19 163 2.4E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0692 e397bfea9be4b5a96606a8235e0e8826 170 SMART SM00347 46 148 8.4E-30 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0692 e397bfea9be4b5a96606a8235e0e8826 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BAMF_0692 e397bfea9be4b5a96606a8235e0e8826 170 Pfam PF01047 MarR family 53 112 2.1E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0692 e397bfea9be4b5a96606a8235e0e8826 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 5.6E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0692 e397bfea9be4b5a96606a8235e0e8826 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 5.6E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0692 e397bfea9be4b5a96606a8235e0e8826 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 5.6E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0692 e397bfea9be4b5a96606a8235e0e8826 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 5.6E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_1037 e9c676e2e7ab56e470cec2301124c345 459 PRINTS PR00113 Alkaline phosphatase signature 256 285 1.9E-42 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BAMF_1037 e9c676e2e7ab56e470cec2301124c345 459 PRINTS PR00113 Alkaline phosphatase signature 103 118 1.9E-42 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BAMF_1037 e9c676e2e7ab56e470cec2301124c345 459 PRINTS PR00113 Alkaline phosphatase signature 140 160 1.9E-42 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BAMF_1037 e9c676e2e7ab56e470cec2301124c345 459 PRINTS PR00113 Alkaline phosphatase signature 190 200 1.9E-42 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BAMF_1037 e9c676e2e7ab56e470cec2301124c345 459 PRINTS PR00113 Alkaline phosphatase signature 47 67 1.9E-42 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BAMF_1037 e9c676e2e7ab56e470cec2301124c345 459 SMART SM00098 48 458 3.4E-191 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BAMF_1037 e9c676e2e7ab56e470cec2301124c345 459 Pfam PF00245 Alkaline phosphatase 47 456 8.7E-131 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BAMF_1037 e9c676e2e7ab56e470cec2301124c345 459 SUPERFAMILY SSF53649 35 456 2.88E-122 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BAMF_1037 e9c676e2e7ab56e470cec2301124c345 459 Gene3D G3DSA:1.10.60.40 332 417 4.8E-139 T 12-10-2018 BAMF_1037 e9c676e2e7ab56e470cec2301124c345 459 Gene3D G3DSA:3.40.720.10 51 447 4.8E-139 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BAMF_1037 e9c676e2e7ab56e470cec2301124c345 459 ProSitePatterns PS00123 Alkaline phosphatase active site. 103 111 - T 12-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BAMF_1444 b67a0f810a36c12c01523cfaf7893242 86 SUPERFAMILY SSF140500 6 57 8.11E-15 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 BAMF_1444 b67a0f810a36c12c01523cfaf7893242 86 Pfam PF09388 Spo0E like sporulation regulatory protein 10 51 2.3E-12 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 BAMF_1444 b67a0f810a36c12c01523cfaf7893242 86 Gene3D G3DSA:1.20.58.990 6 62 5.9E-10 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 BAMF_1280 653e74c9b7efda183f6a197665804851 130 SUPERFAMILY SSF56672 11 95 1.6E-9 T 12-10-2018 BAMF_1280 653e74c9b7efda183f6a197665804851 130 Gene3D G3DSA:3.30.70.270 12 95 1.5E-7 T 12-10-2018 BAMF_1280 653e74c9b7efda183f6a197665804851 130 Gene3D G3DSA:2.30.40.20 29 83 1.5E-7 T 12-10-2018 BAMF_1280 653e74c9b7efda183f6a197665804851 130 Pfam PF00817 impB/mucB/samB family 15 96 1.9E-8 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BAMF_0015 a38fad51072196cb7cc188e2a6282e24 217 PIRSF PIRSF000705 1 217 1.8E-67 T 12-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 BAMF_0015 a38fad51072196cb7cc188e2a6282e24 217 SUPERFAMILY SSF52540 8 211 4.62E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0015 a38fad51072196cb7cc188e2a6282e24 217 Pfam PF01712 Deoxynucleoside kinase 12 211 8.3E-68 T 12-10-2018 IPR031314 Deoxynucleoside kinase domain BAMF_0015 a38fad51072196cb7cc188e2a6282e24 217 Gene3D G3DSA:3.40.50.300 9 214 6.5E-56 T 12-10-2018 BAMF_1352 8d10a0784ab05e5b64df92e23aeda75a 148 Pfam PF08890 Phage XkdN-like tail assembly chaperone protein, TAC 12 147 9.7E-38 T 12-10-2018 IPR014986 Clostridium phage phiCD119, XkdN BAMF_1352 8d10a0784ab05e5b64df92e23aeda75a 148 Gene3D G3DSA:3.30.2220.30 16 136 5.4E-48 T 12-10-2018 IPR038559 Clostridium phage phiCD119, XkdN superfamily BAMF_2942 2550c23803ea9d67975d7cef16f83b62 278 SUPERFAMILY SSF53474 14 277 2.68E-60 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2942 2550c23803ea9d67975d7cef16f83b62 278 Gene3D G3DSA:3.40.50.1820 6 278 7.3E-65 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2942 2550c23803ea9d67975d7cef16f83b62 278 Pfam PF12697 Alpha/beta hydrolase family 35 271 3.0E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_2942 2550c23803ea9d67975d7cef16f83b62 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 1.7E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_2942 2550c23803ea9d67975d7cef16f83b62 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 1.7E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_2942 2550c23803ea9d67975d7cef16f83b62 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 1.7E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_2942 2550c23803ea9d67975d7cef16f83b62 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 223 237 1.7E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_2942 2550c23803ea9d67975d7cef16f83b62 278 PRINTS PR00412 Epoxide hydrolase signature 39 57 5.4E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BAMF_2942 2550c23803ea9d67975d7cef16f83b62 278 PRINTS PR00412 Epoxide hydrolase signature 117 130 5.4E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BAMF_2942 2550c23803ea9d67975d7cef16f83b62 278 PRINTS PR00412 Epoxide hydrolase signature 254 276 5.4E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BAMF_3862 5a81346240be637be8b06ed4a9537eee 457 SUPERFAMILY SSF52540 186 436 2.03E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3862 5a81346240be637be8b06ed4a9537eee 457 SMART SM00382 205 394 0.0047 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3862 5a81346240be637be8b06ed4a9537eee 457 Gene3D G3DSA:3.40.50.300 170 457 6.2E-121 T 12-10-2018 BAMF_3862 5a81346240be637be8b06ed4a9537eee 457 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 12 445 1.7E-188 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 BAMF_3862 5a81346240be637be8b06ed4a9537eee 457 Pfam PF03796 DnaB-like helicase C terminal domain 188 443 1.2E-119 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 BAMF_3862 5a81346240be637be8b06ed4a9537eee 457 Gene3D G3DSA:1.10.860.10 4 169 4.6E-65 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BAMF_3862 5a81346240be637be8b06ed4a9537eee 457 SUPERFAMILY SSF48024 11 122 1.83E-37 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 BAMF_3862 5a81346240be637be8b06ed4a9537eee 457 Pfam PF00772 DnaB-like helicase N terminal domain 13 114 1.2E-34 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 BAMF_2890 591880ffac49342eb3841b9657052ed4 135 Pfam PF05105 Bacteriophage holin family 18 125 5.8E-29 T 12-10-2018 IPR006480 Bacteriophage holin family BAMF_2890 591880ffac49342eb3841b9657052ed4 135 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 10 133 1.4E-32 T 12-10-2018 IPR006480 Bacteriophage holin family BAMF_1917 02c5c692511a541f9a890a8ee6c40e4d 218 SMART SM00882 6 202 2.1E-70 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BAMF_1917 02c5c692511a541f9a890a8ee6c40e4d 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 12-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 BAMF_1917 02c5c692511a541f9a890a8ee6c40e4d 218 SUPERFAMILY SSF100950 5 213 2.62E-71 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BAMF_1917 02c5c692511a541f9a890a8ee6c40e4d 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 5 208 3.1E-95 T 12-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 BAMF_1917 02c5c692511a541f9a890a8ee6c40e4d 218 Pfam PF01144 Coenzyme A transferase 8 201 1.7E-44 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BAMF_1917 02c5c692511a541f9a890a8ee6c40e4d 218 Gene3D G3DSA:3.40.1080.10 1 215 1.3E-101 T 12-10-2018 BAMF_2394 4aeadc0cd36ce8b9da5ee9241c2dabc6 260 Pfam PF00005 ABC transporter 29 185 4.3E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_2394 4aeadc0cd36ce8b9da5ee9241c2dabc6 260 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 14 260 2.9E-120 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 BAMF_2394 4aeadc0cd36ce8b9da5ee9241c2dabc6 260 Gene3D G3DSA:3.40.50.300 12 258 2.7E-63 T 12-10-2018 BAMF_2394 4aeadc0cd36ce8b9da5ee9241c2dabc6 260 SMART SM00382 38 231 3.2E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2394 4aeadc0cd36ce8b9da5ee9241c2dabc6 260 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_2394 4aeadc0cd36ce8b9da5ee9241c2dabc6 260 SUPERFAMILY SSF52540 11 249 7.41E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3440 a9e2be986523d03cedeb3de1760614ff 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 48 315 1.1E-52 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BAMF_2110 491a6ec2cc90ca87e87ec24abdbc004f 434 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 332 352 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BAMF_2110 491a6ec2cc90ca87e87ec24abdbc004f 434 Pfam PF00860 Permease family 7 385 1.4E-122 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BAMF_2110 491a6ec2cc90ca87e87ec24abdbc004f 434 TIGRFAM TIGR03173 pbuX: xanthine permease 11 417 1.3E-165 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 BAMF_2110 491a6ec2cc90ca87e87ec24abdbc004f 434 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 6 415 3.0E-145 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BAMF_3381 652e61aee8714bfb6dd0764033ee8d84 305 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 163 1.2E-53 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 BAMF_3381 652e61aee8714bfb6dd0764033ee8d84 305 Pfam PF00669 Bacterial flagellin N-terminal helical region 7 139 2.9E-22 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BAMF_3381 652e61aee8714bfb6dd0764033ee8d84 305 Gene3D G3DSA:1.20.1330.10 40 251 1.5E-44 T 12-10-2018 BAMF_3381 652e61aee8714bfb6dd0764033ee8d84 305 SUPERFAMILY SSF64518 1 305 1.7E-67 T 12-10-2018 BAMF_2224 230e3f2a3888516b9cf5def6f36626f2 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 12 150 2.6E-60 T 12-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BAMF_2224 230e3f2a3888516b9cf5def6f36626f2 154 SUPERFAMILY SSF52121 3 153 2.49E-63 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BAMF_2224 230e3f2a3888516b9cf5def6f36626f2 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 30.619 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BAMF_2224 230e3f2a3888516b9cf5def6f36626f2 154 Gene3D G3DSA:3.40.50.960 1 154 1.5E-67 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BAMF_2224 230e3f2a3888516b9cf5def6f36626f2 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 13 149 1.1E-60 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BAMF_0420 da80fda39f3089f0b91667e8028bf1c1 268 Gene3D G3DSA:3.40.190.170 44 251 2.2E-64 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily BAMF_0420 da80fda39f3089f0b91667e8028bf1c1 268 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 49 243 7.1E-77 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 BAMF_0420 da80fda39f3089f0b91667e8028bf1c1 268 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 49 244 4.0E-69 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 BAMF_2058 dfc54dc2dbfd16c9c4b9adca92e2062e 425 Pfam PF00535 Glycosyl transferase family 2 8 170 1.3E-23 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BAMF_2058 dfc54dc2dbfd16c9c4b9adca92e2062e 425 Gene3D G3DSA:3.90.550.10 6 267 6.1E-63 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_2058 dfc54dc2dbfd16c9c4b9adca92e2062e 425 SUPERFAMILY SSF53448 6 224 4.22E-40 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0835 f6d90f84ced9c02df51ecf4009ea17ba 118 SUPERFAMILY SSF89064 1 63 1.96E-7 T 12-10-2018 IPR036173 G39, N-terminal domain superfamily BAMF_0835 f6d90f84ced9c02df51ecf4009ea17ba 118 Pfam PF11417 Loader and inhibitor of phage G40P 1 62 1.2E-6 T 12-10-2018 IPR024424 Replicative helicase inhibitor G39P, N-terminal BAMF_0835 f6d90f84ced9c02df51ecf4009ea17ba 118 Gene3D G3DSA:1.10.8.200 1 64 2.5E-14 T 12-10-2018 BAMF_0746 992060d79f3b9152074158a9b9289e4c 372 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 66 353 2.4E-88 T 12-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 BAMF_0746 992060d79f3b9152074158a9b9289e4c 372 Pfam PF02378 Phosphotransferase system, EIIC 13 311 3.0E-45 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BAMF_1083 1fd44228c3edcc58dd10302f0e1463ec 407 Gene3D G3DSA:3.60.21.10 2 252 1.2E-55 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BAMF_1083 1fd44228c3edcc58dd10302f0e1463ec 407 PIRSF PIRSF033091 1 407 1.4E-143 T 12-10-2018 IPR014576 Predicted phosphoesterase, YhaO type BAMF_1083 1fd44228c3edcc58dd10302f0e1463ec 407 SUPERFAMILY SSF56300 5 292 1.52E-53 T 12-10-2018 BAMF_1083 1fd44228c3edcc58dd10302f0e1463ec 407 Pfam PF00149 Calcineurin-like phosphoesterase 4 202 5.9E-14 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BAMF_3654 34f00f8e078798fc2c2dcd0d70f50377 81 Pfam PF04226 Transglycosylase associated protein 33 78 1.2E-9 T 12-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 BAMF_2163 2276281637dca10c0bd933d9660546d5 360 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 220 229 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 BAMF_2163 2276281637dca10c0bd933d9660546d5 360 Gene3D G3DSA:3.40.640.10 43 268 9.0E-120 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_2163 2276281637dca10c0bd933d9660546d5 360 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 359 2.6E-121 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 BAMF_2163 2276281637dca10c0bd933d9660546d5 360 Pfam PF00155 Aminotransferase class I and II 30 354 3.8E-66 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_2163 2276281637dca10c0bd933d9660546d5 360 SUPERFAMILY SSF53383 4 360 2.06E-84 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_2163 2276281637dca10c0bd933d9660546d5 360 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 360 62.026 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 BAMF_2163 2276281637dca10c0bd933d9660546d5 360 Gene3D G3DSA:3.90.1150.10 20 349 9.0E-120 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_3388 b58ddb8fac24de852d657a5450f9b654 461 Gene3D G3DSA:3.40.50.300 302 460 1.1E-21 T 12-10-2018 BAMF_3388 b58ddb8fac24de852d657a5450f9b654 461 Pfam PF00271 Helicase conserved C-terminal domain 329 421 1.1E-11 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_3388 b58ddb8fac24de852d657a5450f9b654 461 Pfam PF04851 Type III restriction enzyme, res subunit 118 266 1.1E-9 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BAMF_3388 b58ddb8fac24de852d657a5450f9b654 461 SUPERFAMILY SSF52540 132 432 5.87E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3388 b58ddb8fac24de852d657a5450f9b654 461 Gene3D G3DSA:3.40.50.300 118 286 1.6E-17 T 12-10-2018 BAMF_3388 b58ddb8fac24de852d657a5450f9b654 461 SMART SM00487 115 299 1.6E-18 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BAMF_3388 b58ddb8fac24de852d657a5450f9b654 461 SMART SM00490 341 422 9.4E-10 T 12-10-2018 IPR001650 Helicase, C-terminal BAMF_2084 2f2adf8fc4196c62ee0e34df5a539e7e 202 Pfam PF14005 YpjP-like protein 68 199 1.7E-58 T 12-10-2018 IPR025616 YpjP-like protein BAMF_1386 eb9a7643a71a5d10a891910920d4bd91 365 Gene3D G3DSA:3.20.20.120 116 353 2.0E-118 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BAMF_1386 eb9a7643a71a5d10a891910920d4bd91 365 Pfam PF13378 Enolase C-terminal domain-like 144 355 6.5E-52 T 12-10-2018 IPR029065 Enolase C-terminal domain-like BAMF_1386 eb9a7643a71a5d10a891910920d4bd91 365 SMART SM00922 141 240 1.9E-29 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BAMF_1386 eb9a7643a71a5d10a891910920d4bd91 365 SUPERFAMILY SSF54826 2 125 1.32E-33 T 12-10-2018 BAMF_1386 eb9a7643a71a5d10a891910920d4bd91 365 SUPERFAMILY SSF51604 112 355 1.83E-68 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BAMF_1386 eb9a7643a71a5d10a891910920d4bd91 365 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 124 2.8E-21 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BAMF_1386 eb9a7643a71a5d10a891910920d4bd91 365 Gene3D G3DSA:3.30.390.10 7 115 2.0E-118 T 12-10-2018 IPR029017 Enolase-like, N-terminal BAMF_1711 2003b99f5f8112794bc662b1ea271c07 677 PIRSF PIRSF005419 1 677 5.6E-261 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BAMF_1711 2003b99f5f8112794bc662b1ea271c07 677 Pfam PF00771 FHIPEP family 15 667 5.1E-274 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BAMF_1711 2003b99f5f8112794bc662b1ea271c07 677 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 126 149 - T 12-10-2018 IPR025505 FHIPEP conserved site BAMF_1711 2003b99f5f8112794bc662b1ea271c07 677 Gene3D G3DSA:1.10.490.80 577 675 5.9E-29 T 12-10-2018 BAMF_1711 2003b99f5f8112794bc662b1ea271c07 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 59 78 2.6E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BAMF_1711 2003b99f5f8112794bc662b1ea271c07 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 121 137 2.6E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BAMF_1711 2003b99f5f8112794bc662b1ea271c07 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 22 35 2.6E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BAMF_1711 2003b99f5f8112794bc662b1ea271c07 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 140 158 2.6E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BAMF_1711 2003b99f5f8112794bc662b1ea271c07 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 221 235 2.6E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BAMF_1711 2003b99f5f8112794bc662b1ea271c07 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 170 187 2.6E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BAMF_1711 2003b99f5f8112794bc662b1ea271c07 677 Gene3D G3DSA:1.10.8.540 486 575 5.7E-32 T 12-10-2018 BAMF_1711 2003b99f5f8112794bc662b1ea271c07 677 Gene3D G3DSA:3.40.30.60 342 485 2.7E-53 T 12-10-2018 BAMF_1711 2003b99f5f8112794bc662b1ea271c07 677 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 4 675 2.2E-284 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 BAMF_2199 1beed9c0c2f813962c4add5f41bc8a86 262 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 49 204 2.2E-11 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 BAMF_2199 1beed9c0c2f813962c4add5f41bc8a86 262 Gene3D G3DSA:3.60.21.10 46 237 5.3E-21 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BAMF_2199 1beed9c0c2f813962c4add5f41bc8a86 262 SUPERFAMILY SSF56300 43 258 9.83E-34 T 12-10-2018 BAMF_1656 20667314c77be083621304005bbbe777 555 SMART SM01120 36 201 9.8E-72 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 BAMF_1656 20667314c77be083621304005bbbe777 555 SMART SM01121 239 555 1.3E-186 T 12-10-2018 IPR033470 Uncharacterised protein, DhaK domain BAMF_1656 20667314c77be083621304005bbbe777 555 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 555 1.8E-213 T 12-10-2018 IPR019986 DAK2 domain-containing protein YloV BAMF_1656 20667314c77be083621304005bbbe777 555 Pfam PF13684 Dihydroxyacetone kinase family 239 555 4.1E-123 T 12-10-2018 IPR033470 Uncharacterised protein, DhaK domain BAMF_1656 20667314c77be083621304005bbbe777 555 Pfam PF02734 DAK2 domain 36 200 1.2E-41 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 BAMF_1656 20667314c77be083621304005bbbe777 555 SUPERFAMILY SSF101473 5 201 5.49E-45 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 BAMF_1656 20667314c77be083621304005bbbe777 555 Gene3D G3DSA:1.25.40.340 5 179 4.0E-12 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 BAMF_0260 3bf34782143c9e1feb8729c804aa156e 279 SUPERFAMILY SSF81345 3 257 1.96E-35 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_0260 3bf34782143c9e1feb8729c804aa156e 279 Pfam PF00950 ABC 3 transport family 6 261 5.8E-81 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 BAMF_0260 3bf34782143c9e1feb8729c804aa156e 279 Gene3D G3DSA:1.10.3470.10 60 261 1.8E-6 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_2252 affaea5929243da2977abb4f330e666e 437 PIRSF PIRSF000106 1 437 6.7E-79 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_2252 affaea5929243da2977abb4f330e666e 437 Gene3D G3DSA:3.40.50.720 234 437 8.6E-45 T 12-10-2018 BAMF_2252 affaea5929243da2977abb4f330e666e 437 SMART SM01274 91 224 2.5E-68 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BAMF_2252 affaea5929243da2977abb4f330e666e 437 SUPERFAMILY SSF53223 85 234 2.81E-49 T 12-10-2018 BAMF_2252 affaea5929243da2977abb4f330e666e 437 Pfam PF00390 Malic enzyme, N-terminal domain 95 224 8.3E-26 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BAMF_2252 affaea5929243da2977abb4f330e666e 437 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 255 349 2.1E-5 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BAMF_2252 affaea5929243da2977abb4f330e666e 437 SUPERFAMILY SSF51735 236 434 8.56E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2252 affaea5929243da2977abb4f330e666e 437 SMART SM00919 236 435 5.5E-44 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BAMF_2252 affaea5929243da2977abb4f330e666e 437 Gene3D G3DSA:3.40.50.10380 73 233 4.2E-63 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 BAMF_2252 affaea5929243da2977abb4f330e666e 437 Pfam PF03949 Malic enzyme, NAD binding domain 362 418 1.2E-6 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BAMF_2252 affaea5929243da2977abb4f330e666e 437 ProSitePatterns PS00331 Malic enzymes signature. 232 248 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 BAMF_3571 17913781c856393f7c070333c86db2a3 184 Gene3D G3DSA:2.130.10.10 2 111 3.6E-7 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BAMF_3571 17913781c856393f7c070333c86db2a3 184 Gene3D G3DSA:2.130.10.10 112 184 4.8E-11 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BAMF_3571 17913781c856393f7c070333c86db2a3 184 SUPERFAMILY SSF50974 8 182 7.85E-17 T 12-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 BAMF_3745 d8b22bc372960fa0d16b5afd3672b0c8 354 Gene3D G3DSA:2.160.20.10 42 352 4.1E-49 T 12-10-2018 IPR012334 Pectin lyase fold BAMF_3745 d8b22bc372960fa0d16b5afd3672b0c8 354 SMART SM00656 65 289 8.3E-44 T 12-10-2018 IPR002022 Pectate lyase BAMF_3745 d8b22bc372960fa0d16b5afd3672b0c8 354 Pfam PF00544 Pectate lyase 101 283 1.2E-42 T 12-10-2018 IPR002022 Pectate lyase BAMF_3745 d8b22bc372960fa0d16b5afd3672b0c8 354 SUPERFAMILY SSF51126 44 349 9.82E-56 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BAMF_3623 eae001473ae4884a1dbb027994a8b914 287 Gene3D G3DSA:3.40.630.30 34 279 7.5E-39 T 12-10-2018 BAMF_3623 eae001473ae4884a1dbb027994a8b914 287 SUPERFAMILY SSF55729 128 279 2.06E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_3623 eae001473ae4884a1dbb027994a8b914 287 Pfam PF00583 Acetyltransferase (GNAT) family 158 269 4.3E-14 T 12-10-2018 IPR000182 GNAT domain BAMF_2272 1de485fb0feff29bd773fff25e481031 54 Pfam PF13314 Domain of unknown function (DUF4083) 2 46 1.1E-6 T 12-10-2018 IPR025143 Protein of unknown function DUF4083 BAMF_3715 fcd3af2b4b57bb4015bb8ecfb4c76f70 280 SUPERFAMILY SSF88713 78 259 6.43E-46 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BAMF_3715 fcd3af2b4b57bb4015bb8ecfb4c76f70 280 Gene3D G3DSA:3.20.20.370 55 275 5.9E-69 T 12-10-2018 BAMF_3715 fcd3af2b4b57bb4015bb8ecfb4c76f70 280 Pfam PF01522 Polysaccharide deacetylase 115 239 4.5E-38 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BAMF_1272 620b509b84837f6b97ec4acea81d2e03 79 SUPERFAMILY SSF160631 2 78 2.88E-12 T 12-10-2018 BAMF_1272 620b509b84837f6b97ec4acea81d2e03 79 Pfam PF14568 SMI1-KNR4 cell-wall 11 78 9.9E-10 T 12-10-2018 BAMF_1272 620b509b84837f6b97ec4acea81d2e03 79 Gene3D G3DSA:3.40.1580.10 1 79 2.5E-12 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily BAMF_0605 6ce15338520cf55315948788d3324274 825 Gene3D G3DSA:3.40.50.300 158 323 7.7E-19 T 12-10-2018 BAMF_0605 6ce15338520cf55315948788d3324274 825 SUPERFAMILY SSF48452 699 805 2.99E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_0605 6ce15338520cf55315948788d3324274 825 Pfam PF13432 Tetratricopeptide repeat 666 725 3.4E-4 T 12-10-2018 BAMF_0605 6ce15338520cf55315948788d3324274 825 SMART SM00382 192 476 1.8E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0605 6ce15338520cf55315948788d3324274 825 SMART SM00028 736 768 10.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0605 6ce15338520cf55315948788d3324274 825 SMART SM00028 775 808 3.5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0605 6ce15338520cf55315948788d3324274 825 Pfam PF13181 Tetratricopeptide repeat 737 761 2.6E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0605 6ce15338520cf55315948788d3324274 825 SUPERFAMILY SSF52540 167 367 9.21E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0605 6ce15338520cf55315948788d3324274 825 Gene3D G3DSA:1.25.40.10 591 805 1.0E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_0605 6ce15338520cf55315948788d3324274 825 Pfam PF00931 NB-ARC domain 183 393 2.7E-9 T 12-10-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 BAMF_0099 858aa431cd2a3983035bb7f7bfae0a25 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 17.591 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0099 858aa431cd2a3983035bb7f7bfae0a25 49 Gene3D G3DSA:2.20.28.120 1 49 9.7E-19 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0099 858aa431cd2a3983035bb7f7bfae0a25 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0099 858aa431cd2a3983035bb7f7bfae0a25 49 Pfam PF00471 Ribosomal protein L33 3 49 4.9E-18 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0099 858aa431cd2a3983035bb7f7bfae0a25 49 SUPERFAMILY SSF57829 1 49 2.62E-16 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BAMF_0099 858aa431cd2a3983035bb7f7bfae0a25 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 49 8.0E-16 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3716 7092f72754155242022230c13b6c9775 366 Pfam PF03459 TOBE domain 303 355 3.4E-8 T 12-10-2018 IPR005116 Transport-associated OB, type 1 BAMF_3716 7092f72754155242022230c13b6c9775 366 Gene3D G3DSA:2.40.50.100 240 361 5.4E-37 T 12-10-2018 BAMF_3716 7092f72754155242022230c13b6c9775 366 Gene3D G3DSA:2.40.50.140 284 349 5.4E-37 T 12-10-2018 BAMF_3716 7092f72754155242022230c13b6c9775 366 Pfam PF00005 ABC transporter 21 162 8.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3716 7092f72754155242022230c13b6c9775 366 SUPERFAMILY SSF52540 4 243 6.73E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3716 7092f72754155242022230c13b6c9775 366 SMART SM00382 29 212 4.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3716 7092f72754155242022230c13b6c9775 366 SUPERFAMILY SSF50331 237 364 1.53E-28 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BAMF_3716 7092f72754155242022230c13b6c9775 366 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3716 7092f72754155242022230c13b6c9775 366 Gene3D G3DSA:3.40.50.300 1 239 3.6E-76 T 12-10-2018 BAMF_3170 48a26bd23c72754dbf44ce75cfbd63e2 336 SUPERFAMILY SSF81345 7 334 1.15E-86 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_3170 48a26bd23c72754dbf44ce75cfbd63e2 336 Gene3D G3DSA:1.10.3470.10 4 336 2.8E-100 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_3170 48a26bd23c72754dbf44ce75cfbd63e2 336 Pfam PF01032 FecCD transport family 18 334 1.1E-95 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BAMF_2824 23d09d0854480a7987a35f238ba71989 231 SMART SM00382 34 224 6.9E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2824 23d09d0854480a7987a35f238ba71989 231 Pfam PF00005 ABC transporter 25 173 2.4E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_2824 23d09d0854480a7987a35f238ba71989 231 SUPERFAMILY SSF52540 2 223 9.52E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2824 23d09d0854480a7987a35f238ba71989 231 Gene3D G3DSA:3.40.50.300 1 230 1.4E-70 T 12-10-2018 BAMF_2824 23d09d0854480a7987a35f238ba71989 231 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_1590 d25b22d3d22065b4a406223322d7bc2d 709 Gene3D G3DSA:3.30.70.2110 79 157 6.5E-55 T 12-10-2018 BAMF_1590 d25b22d3d22065b4a406223322d7bc2d 709 SUPERFAMILY SSF54184 651 706 3.4E-12 T 12-10-2018 BAMF_1590 d25b22d3d22065b4a406223322d7bc2d 709 SUPERFAMILY SSF56519 56 235 2.75E-45 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BAMF_1590 d25b22d3d22065b4a406223322d7bc2d 709 SMART SM00740 590 650 3.0E-9 T 12-10-2018 IPR005543 PASTA domain BAMF_1590 d25b22d3d22065b4a406223322d7bc2d 709 SMART SM00740 651 707 0.0086 T 12-10-2018 IPR005543 PASTA domain BAMF_1590 d25b22d3d22065b4a406223322d7bc2d 709 Gene3D G3DSA:2.20.70.70 55 222 6.5E-55 T 12-10-2018 BAMF_1590 d25b22d3d22065b4a406223322d7bc2d 709 Gene3D G3DSA:3.90.1310.10 60 202 6.5E-55 T 12-10-2018 BAMF_1590 d25b22d3d22065b4a406223322d7bc2d 709 SUPERFAMILY SSF56601 186 585 8.98E-95 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_1590 d25b22d3d22065b4a406223322d7bc2d 709 Pfam PF00905 Penicillin binding protein transpeptidase domain 262 567 5.8E-89 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BAMF_1590 d25b22d3d22065b4a406223322d7bc2d 709 Pfam PF03717 Penicillin-binding Protein dimerisation domain 58 218 4.9E-24 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BAMF_1590 d25b22d3d22065b4a406223322d7bc2d 709 SUPERFAMILY SSF54184 593 649 4.32E-13 T 12-10-2018 BAMF_1590 d25b22d3d22065b4a406223322d7bc2d 709 Pfam PF03793 PASTA domain 595 648 3.1E-7 T 12-10-2018 IPR005543 PASTA domain BAMF_1590 d25b22d3d22065b4a406223322d7bc2d 709 Pfam PF03793 PASTA domain 652 704 1.9E-8 T 12-10-2018 IPR005543 PASTA domain BAMF_1590 d25b22d3d22065b4a406223322d7bc2d 709 Gene3D G3DSA:3.40.710.10 229 578 5.4E-102 T 12-10-2018 BAMF_0594 16e4a4c6f47872649010bec178397ae3 254 Gene3D G3DSA:2.40.30.200 3 138 3.0E-47 T 12-10-2018 IPR038675 Streptococcus phage 7201 Orf34, N-terminal domain superfamily BAMF_0594 16e4a4c6f47872649010bec178397ae3 254 TIGRFAM TIGR01633 phi3626_gp14_N: putative phage tail component, N-terminal domain 15 137 1.3E-28 T 12-10-2018 IPR006520 Streptococcus phage 7201, Orf34, N-terminal BAMF_0594 16e4a4c6f47872649010bec178397ae3 254 Gene3D G3DSA:2.60.120.860 140 250 2.0E-36 T 12-10-2018 BAMF_0594 16e4a4c6f47872649010bec178397ae3 254 Pfam PF05709 Phage tail protein 29 233 8.8E-36 T 12-10-2018 IPR008841 Siphovirus-type tail component BAMF_0650 3e7a113a4d42280d3ed88ffce62818d1 73 Pfam PF11127 Protein of unknown function (DUF2892) 1 67 1.2E-11 T 12-10-2018 IPR021309 Protein of unknown function DUF2892 BAMF_1206 f92113affd3cdbcb837ac14874bb03ae 312 SUPERFAMILY SSF53901 3 310 1.05E-72 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1206 f92113affd3cdbcb837ac14874bb03ae 312 Gene3D G3DSA:3.40.47.10 1 312 4.9E-132 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BAMF_1206 f92113affd3cdbcb837ac14874bb03ae 312 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 310 71.167 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BAMF_1206 f92113affd3cdbcb837ac14874bb03ae 312 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 310 3.1E-144 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BAMF_1206 f92113affd3cdbcb837ac14874bb03ae 312 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 221 310 1.2E-35 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BAMF_1206 f92113affd3cdbcb837ac14874bb03ae 312 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 184 2.6E-30 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BAMF_3168 d0b668fc6fae85927a696b91ef885b0d 140 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 11 133 2.0E-35 T 12-10-2018 BAMF_3168 d0b668fc6fae85927a696b91ef885b0d 140 Pfam PF14184 Regulatory protein YrvL 11 132 7.1E-25 T 12-10-2018 IPR025912 Regulatory protein YrvL BAMF_2599 1e6a0c8339da1cf1d4a616318c528c3e 192 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 17 71 4.0E-22 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain BAMF_2599 1e6a0c8339da1cf1d4a616318c528c3e 192 SMART SM01317 73 187 2.2E-62 T 12-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal BAMF_2599 1e6a0c8339da1cf1d4a616318c528c3e 192 Pfam PF14682 Sporulation initiation phospho-transferase B, C-terminal 74 186 1.0E-33 T 12-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal BAMF_2599 1e6a0c8339da1cf1d4a616318c528c3e 192 SUPERFAMILY SSF55890 15 190 1.27E-60 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 BAMF_2599 1e6a0c8339da1cf1d4a616318c528c3e 192 Gene3D G3DSA:1.10.287.130 1 71 4.8E-30 T 12-10-2018 BAMF_2599 1e6a0c8339da1cf1d4a616318c528c3e 192 Gene3D G3DSA:3.30.565.30 72 190 3.6E-39 T 12-10-2018 IPR037100 Sporulation initiation phosphotransferase B, C-terminal domain superfamily BAMF_1532 dcfb47aa12ee46b29154d0fa8716bb46 220 Pfam PF10368 Putative cell-wall binding lipoprotein 17 214 8.6E-67 T 12-10-2018 IPR019454 Putative cell-wall binding lipoprotein YkyA-like BAMF_1532 dcfb47aa12ee46b29154d0fa8716bb46 220 Gene3D G3DSA:1.20.120.570 21 211 8.6E-49 T 12-10-2018 IPR036785 YkyA-like superfamily BAMF_1532 dcfb47aa12ee46b29154d0fa8716bb46 220 SUPERFAMILY SSF140423 23 212 3.4E-56 T 12-10-2018 IPR036785 YkyA-like superfamily BAMF_1586 ad694a7bdaf778d3173a60cb5b6cfd1a 558 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 30 556 2.4E-193 T 12-10-2018 IPR011199 Bacillithiol biosynthesis BshC BAMF_1586 ad694a7bdaf778d3173a60cb5b6cfd1a 558 Pfam PF10079 Bacillithiol biosynthesis BshC 20 555 2.1E-172 T 12-10-2018 IPR011199 Bacillithiol biosynthesis BshC BAMF_1586 ad694a7bdaf778d3173a60cb5b6cfd1a 558 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 20 558 31.843 T 12-10-2018 IPR011199 Bacillithiol biosynthesis BshC BAMF_1586 ad694a7bdaf778d3173a60cb5b6cfd1a 558 PIRSF PIRSF012535 20 558 8.3E-224 T 12-10-2018 IPR011199 Bacillithiol biosynthesis BshC BAMF_1503 22703e9ac1c400cd620cb3c9979100dc 339 Gene3D G3DSA:3.40.50.720 2 250 6.0E-75 T 12-10-2018 BAMF_1503 22703e9ac1c400cd620cb3c9979100dc 339 Pfam PF00899 ThiF family 5 241 1.4E-59 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BAMF_1503 22703e9ac1c400cd620cb3c9979100dc 339 SUPERFAMILY SSF69572 2 329 1.11E-82 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BAMF_2511 fab4363d6c3f91bc954ca3e79b9f15cb 267 Gene3D G3DSA:3.40.50.1000 5 258 2.8E-59 T 12-10-2018 IPR023214 HAD superfamily BAMF_2511 fab4363d6c3f91bc954ca3e79b9f15cb 267 SUPERFAMILY SSF56784 1 262 1.77E-55 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_2511 fab4363d6c3f91bc954ca3e79b9f15cb 267 Gene3D G3DSA:3.30.1240.10 82 188 2.8E-59 T 12-10-2018 BAMF_2511 fab4363d6c3f91bc954ca3e79b9f15cb 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 258 3.9E-44 T 12-10-2018 BAMF_2511 fab4363d6c3f91bc954ca3e79b9f15cb 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 231 1.6E-19 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BAMF_1639 d8e3e35f73cddf821ba373ab14d96347 89 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 5 78 2.0E-36 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A BAMF_1639 d8e3e35f73cddf821ba373ab14d96347 89 Hamap MF_01503 UPF0296 protein . 3 86 29.068 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A BAMF_1639 d8e3e35f73cddf821ba373ab14d96347 89 Pfam PF04025 Domain of unknown function (DUF370) 5 77 2.9E-36 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A BAMF_0223 c89c23066cfedd7821f7f47ce4780c93 85 Gene3D G3DSA:3.40.710.10 2 11 4.0E-29 T 12-10-2018 BAMF_0223 c89c23066cfedd7821f7f47ce4780c93 85 Pfam PF04960 Glutaminase 2 73 1.4E-25 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BAMF_0223 c89c23066cfedd7821f7f47ce4780c93 85 Gene3D G3DSA:1.10.1500.10 12 74 4.0E-29 T 12-10-2018 BAMF_0223 c89c23066cfedd7821f7f47ce4780c93 85 SUPERFAMILY SSF56601 2 74 1.46E-27 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_0815 14dddcee545f33fcf1c304dfd72f88d4 50 Hamap MF_01504 Small, acid-soluble spore protein K [sspK]. 2 50 19.037 T 12-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 BAMF_0815 14dddcee545f33fcf1c304dfd72f88d4 50 TIGRFAM TIGR03091 SASP_sspK: small, acid-soluble spore protein K 17 48 9.6E-23 T 12-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 BAMF_0815 14dddcee545f33fcf1c304dfd72f88d4 50 Pfam PF08176 Small acid-soluble spore protein K family 2 48 7.5E-30 T 12-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 BAMF_1705 3a5476186ee33cd1d6ecc662753bf563 120 SMART SM00448 3 115 4.1E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_1705 3a5476186ee33cd1d6ecc662753bf563 120 SUPERFAMILY SSF52172 4 119 3.27E-41 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_1705 3a5476186ee33cd1d6ecc662753bf563 120 Gene3D G3DSA:3.40.50.2300 2 120 1.7E-41 T 12-10-2018 BAMF_1705 3a5476186ee33cd1d6ecc662753bf563 120 Pfam PF00072 Response regulator receiver domain 5 116 8.0E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_2365 0e98c73c4191b145b618c6c463d2d93b 261 TIGRFAM TIGR04088 cognate_SipW: SipW-cognate class signal peptide 11 44 3.1E-10 T 12-10-2018 IPR023833 Signal peptide, camelysin BAMF_2365 0e98c73c4191b145b618c6c463d2d93b 261 Pfam PF12389 Camelysin metallo-endopeptidase 3 235 7.1E-37 T 12-10-2018 IPR022121 Peptidase M73, camelysin BAMF_3863 dc75e750b1c5eb13ee8f3ca1784917b1 65 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 4 65 1.8E-14 T 12-10-2018 IPR018691 Protein of unknown function DUF2188 BAMF_3863 dc75e750b1c5eb13ee8f3ca1784917b1 65 ProDom PD054650 YYCD 1 65 9.0E-25 T 12-10-2018 IPR020086 Uncharacterised protein family YycD BAMF_2339 4627a3bb63133a32c4e83f5f6d412614 159 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 118 131 1.4E-14 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BAMF_2339 4627a3bb63133a32c4e83f5f6d412614 159 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 86 99 1.4E-14 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BAMF_2339 4627a3bb63133a32c4e83f5f6d412614 159 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 103 117 1.4E-14 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BAMF_2339 4627a3bb63133a32c4e83f5f6d412614 159 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 2 157 5.9E-59 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BAMF_2339 4627a3bb63133a32c4e83f5f6d412614 159 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 113 130 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BAMF_2339 4627a3bb63133a32c4e83f5f6d412614 159 Gene3D G3DSA:2.40.50.100 79 156 2.3E-27 T 12-10-2018 BAMF_2339 4627a3bb63133a32c4e83f5f6d412614 159 SUPERFAMILY SSF51230 80 156 2.09E-22 T 12-10-2018 IPR011053 Single hybrid motif BAMF_2339 4627a3bb63133a32c4e83f5f6d412614 159 Pfam PF00364 Biotin-requiring enzyme 83 154 7.6E-22 T 12-10-2018 IPR000089 Biotin/lipoyl attachment BAMF_0488 b68829a444b6f25431195b744a674d84 99 Pfam PF07875 Coat F domain 15 76 1.2E-24 T 12-10-2018 IPR012851 Spore coat protein CotF-like BAMF_0656 a2d8c3c1e6fcd99551babf25e71de466 739 Gene3D G3DSA:1.10.10.160 116 190 7.2E-110 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily BAMF_0656 a2d8c3c1e6fcd99551babf25e71de466 739 Gene3D G3DSA:1.10.486.10 386 552 2.4E-133 T 12-10-2018 BAMF_0656 a2d8c3c1e6fcd99551babf25e71de466 739 SUPERFAMILY SSF52540 1 648 3.43E-185 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0656 a2d8c3c1e6fcd99551babf25e71de466 739 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 275 4.6E-83 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BAMF_0656 a2d8c3c1e6fcd99551babf25e71de466 739 Pfam PF13361 UvrD-like helicase C-terminal domain 280 621 3.9E-73 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BAMF_0656 a2d8c3c1e6fcd99551babf25e71de466 739 Gene3D G3DSA:3.40.50.300 12 276 7.2E-110 T 12-10-2018 BAMF_0656 a2d8c3c1e6fcd99551babf25e71de466 739 Gene3D G3DSA:3.40.50.300 283 639 2.4E-133 T 12-10-2018 BAMF_0656 a2d8c3c1e6fcd99551babf25e71de466 739 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 8 737 0.0 T 12-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 BAMF_3019 8061bac42bb3682e0b8a2ae9ce78c46b 120 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 105 1.3E-20 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BAMF_3019 8061bac42bb3682e0b8a2ae9ce78c46b 120 SUPERFAMILY SSF89360 4 98 2.94E-30 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BAMF_3019 8061bac42bb3682e0b8a2ae9ce78c46b 120 Gene3D G3DSA:2.60.300.12 4 113 1.1E-37 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BAMF_3019 8061bac42bb3682e0b8a2ae9ce78c46b 120 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 91 108 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 BAMF_3019 8061bac42bb3682e0b8a2ae9ce78c46b 120 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 5 109 7.1E-39 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 BAMF_0257 a39a8b5fe0e864f443f0fe60235a5464 181 Gene3D G3DSA:1.10.10.10 7 93 3.9E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0257 a39a8b5fe0e864f443f0fe60235a5464 181 Pfam PF10400 Virulence activator alpha C-term 98 176 2.9E-14 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal BAMF_0257 a39a8b5fe0e864f443f0fe60235a5464 181 SUPERFAMILY SSF46785 7 177 2.63E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0257 a39a8b5fe0e864f443f0fe60235a5464 181 Pfam PF03551 Transcriptional regulator PadR-like family 11 84 1.0E-16 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal BAMF_2689 ab9eb403f329ca29ab023f5d025d4acc 88 Pfam PF06961 Protein of unknown function (DUF1294) 11 65 7.0E-22 T 12-10-2018 IPR010718 Protein of unknown function DUF1294 BAMF_1350 cb94a6fc1eb88e64079424698b659750 465 Gene3D G3DSA:3.40.50.11790 207 378 3.3E-63 T 12-10-2018 BAMF_1350 cb94a6fc1eb88e64079424698b659750 465 Gene3D G3DSA:1.10.10.2290 268 348 3.3E-63 T 12-10-2018 BAMF_1350 cb94a6fc1eb88e64079424698b659750 465 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 202 350 3.4E-34 T 12-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain BAMF_1350 cb94a6fc1eb88e64079424698b659750 465 Gene3D G3DSA:3.30.1490.360 26 93 8.8E-23 T 12-10-2018 BAMF_1350 cb94a6fc1eb88e64079424698b659750 465 Gene3D G3DSA:3.30.160.610 97 177 1.2E-26 T 12-10-2018 BAMF_1350 cb94a6fc1eb88e64079424698b659750 465 Pfam PF17482 Phage tail sheath C-terminal domain 357 464 6.5E-25 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain BAMF_1350 cb94a6fc1eb88e64079424698b659750 465 Pfam PF17481 Phage tail sheath protein beta-sandwich domain 102 171 2.1E-8 T 12-10-2018 IPR035326 Phage tail sheath protein, beta-sandwich domain BAMF_1350 cb94a6fc1eb88e64079424698b659750 465 ProDom PD032508 PHAGE-LIKE PBSX XKDK ELEMENT PHAGE LIN1278 SHEATH YQBL RELATED TAIL 332 464 3.0E-58 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain BAMF_1350 cb94a6fc1eb88e64079424698b659750 465 Gene3D G3DSA:3.30.360.90 396 465 2.6E-20 T 12-10-2018 BAMF_1387 e8664493d764d6c693580a123af6d53d 299 Gene3D G3DSA:2.30.30.40 1 108 1.5E-38 T 12-10-2018 BAMF_1387 e8664493d764d6c693580a123af6d53d 299 SUPERFAMILY SSF54001 175 294 8.34E-34 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BAMF_1387 e8664493d764d6c693580a123af6d53d 299 Pfam PF00877 NlpC/P60 family 185 292 3.9E-25 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BAMF_1387 e8664493d764d6c693580a123af6d53d 299 Gene3D G3DSA:2.30.30.40 109 169 5.9E-9 T 12-10-2018 BAMF_1387 e8664493d764d6c693580a123af6d53d 299 Gene3D G3DSA:3.90.1720.10 170 299 1.5E-33 T 12-10-2018 BAMF_1391 1e789642221f3b0334e140e3b157d4f0 172 Pfam PF03061 Thioesterase superfamily 28 100 4.5E-16 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BAMF_1391 1e789642221f3b0334e140e3b157d4f0 172 Gene3D G3DSA:3.10.129.10 2 168 3.6E-56 T 12-10-2018 BAMF_1391 1e789642221f3b0334e140e3b157d4f0 172 SUPERFAMILY SSF54637 5 154 1.07E-46 T 12-10-2018 IPR029069 HotDog domain superfamily BAMF_1241 131c148fba4c14b66ff77baec7af2fcb 369 SUPERFAMILY SSF51905 5 364 3.67E-47 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1241 131c148fba4c14b66ff77baec7af2fcb 369 Gene3D G3DSA:3.30.9.10 92 305 2.7E-129 T 12-10-2018 BAMF_1241 131c148fba4c14b66ff77baec7af2fcb 369 Pfam PF01266 FAD dependent oxidoreductase 7 344 1.4E-68 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BAMF_1241 131c148fba4c14b66ff77baec7af2fcb 369 Gene3D G3DSA:3.50.50.60 8 346 2.7E-129 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_1241 131c148fba4c14b66ff77baec7af2fcb 369 SUPERFAMILY SSF54373 220 305 3.27E-19 T 12-10-2018 BAMF_1241 131c148fba4c14b66ff77baec7af2fcb 369 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 8 350 5.9E-110 T 12-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 BAMF_1156 b2e853f5251a0764297ac40b2552d42a 206 Pfam PF10737 Spore germination protein GerPC 24 197 2.0E-61 T 12-10-2018 IPR019673 Spore germination protein GerPC BAMF_2679 737647b8c58d862426071533b4de0fa6 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 300 8.7E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_2679 737647b8c58d862426071533b4de0fa6 313 Gene3D G3DSA:1.10.3720.10 68 310 1.3E-61 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2679 737647b8c58d862426071533b4de0fa6 313 SUPERFAMILY SSF161098 72 300 4.45E-52 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1481 9e9444d80f8d313e073f6a4e6aee6090 166 Pfam PF01476 LysM domain 6 48 5.8E-11 T 12-10-2018 IPR018392 LysM domain BAMF_1481 9e9444d80f8d313e073f6a4e6aee6090 166 SUPERFAMILY SSF54106 4 48 1.7E-10 T 12-10-2018 BAMF_1481 9e9444d80f8d313e073f6a4e6aee6090 166 Pfam PF03734 L,D-transpeptidase catalytic domain 58 164 2.2E-20 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 BAMF_1481 9e9444d80f8d313e073f6a4e6aee6090 166 Gene3D G3DSA:3.10.350.10 3 48 1.1E-19 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_1481 9e9444d80f8d313e073f6a4e6aee6090 166 SUPERFAMILY SSF141523 57 165 4.97E-34 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BAMF_1481 9e9444d80f8d313e073f6a4e6aee6090 166 Gene3D G3DSA:2.40.440.10 50 166 1.8E-45 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BAMF_1481 9e9444d80f8d313e073f6a4e6aee6090 166 SMART SM00257 5 48 2.7E-11 T 12-10-2018 IPR018392 LysM domain BAMF_1891 b8770d584913079c58171b7d1e529f68 138 SUPERFAMILY SSF54637 6 133 1.33E-39 T 12-10-2018 IPR029069 HotDog domain superfamily BAMF_1891 b8770d584913079c58171b7d1e529f68 138 Pfam PF03061 Thioesterase superfamily 18 102 3.0E-15 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BAMF_1891 b8770d584913079c58171b7d1e529f68 138 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 123 1.1E-42 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BAMF_1891 b8770d584913079c58171b7d1e529f68 138 PIRSF PIRSF003230 1 136 5.1E-33 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BAMF_1891 b8770d584913079c58171b7d1e529f68 138 Gene3D G3DSA:3.10.129.10 3 138 7.8E-37 T 12-10-2018 BAMF_1801 acada5ae640361857a6a1b0ae7184914 134 Pfam PF12788 YmaF family 13 66 2.8E-9 T 12-10-2018 IPR024307 YmaF BAMF_2407 e971291bd0425bc98cfd4b891baf4137 193 Gene3D G3DSA:3.40.50.1000 1 163 9.8E-12 T 12-10-2018 IPR023214 HAD superfamily BAMF_2407 e971291bd0425bc98cfd4b891baf4137 193 SUPERFAMILY SSF56784 4 162 1.58E-20 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_2407 e971291bd0425bc98cfd4b891baf4137 193 PIRSF PIRSF021362 1 191 9.8E-86 T 12-10-2018 IPR009206 Nucleotidase, putative BAMF_1496 8d9077dea618f3fecbf482bee66b1ba0 81 Hamap MF_00506 UPF0180 protein . 2 80 27.707 T 12-10-2018 IPR005370 Uncharacterised protein family UPF0180 BAMF_1496 8d9077dea618f3fecbf482bee66b1ba0 81 Pfam PF03698 Uncharacterised protein family (UPF0180) 3 79 5.1E-31 T 12-10-2018 IPR005370 Uncharacterised protein family UPF0180 BAMF_1496 8d9077dea618f3fecbf482bee66b1ba0 81 ProDom PD059670 UPF0180 YKUS BA1413/GBAA1413/BAS1304 YKUS-LIKE BT9727_1277 BCE1513 GK1051 BH2667 ABC2430 BCE33L1278 4 48 5.0E-16 T 12-10-2018 IPR005370 Uncharacterised protein family UPF0180 BAMF_3830 9b56468cc41514d6c11f7fa51d4a30d1 315 Pfam PF02625 XdhC and CoxI family 14 78 3.9E-17 T 12-10-2018 IPR003777 XdhC- CoxI BAMF_3830 9b56468cc41514d6c11f7fa51d4a30d1 315 Pfam PF13478 XdhC Rossmann domain 194 315 2.4E-21 T 12-10-2018 IPR027051 XdhC Rossmann domain BAMF_3830 9b56468cc41514d6c11f7fa51d4a30d1 315 Gene3D G3DSA:3.40.50.720 193 315 1.7E-36 T 12-10-2018 BAMF_1240 2969ca07b956e5b8e03d4bd72f348730 230 Pfam PF02581 Thiamine monophosphate synthase 29 204 8.0E-39 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_1240 2969ca07b956e5b8e03d4bd72f348730 230 SUPERFAMILY SSF51391 23 221 9.68E-47 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BAMF_1240 2969ca07b956e5b8e03d4bd72f348730 230 Gene3D G3DSA:3.20.20.70 26 230 2.9E-56 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_3650 278742a62d76b9e7a5e46fd17b86a222 122 TIGRFAM TIGR02901 QoxD: cytochrome aa3 quinol oxidase, subunit IV 8 99 5.9E-36 T 12-10-2018 IPR014250 Quinol oxidase subunit IV GO:0016021|GO:0016682|GO:0042773 BAMF_3650 278742a62d76b9e7a5e46fd17b86a222 122 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 16 89 2.4E-13 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 BAMF_0259 e970ad65ca68812e1a03c82b25495a8d 238 Gene3D G3DSA:3.40.50.300 2 227 1.9E-59 T 12-10-2018 BAMF_0259 e970ad65ca68812e1a03c82b25495a8d 238 SUPERFAMILY SSF52540 10 222 1.95E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0259 e970ad65ca68812e1a03c82b25495a8d 238 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0259 e970ad65ca68812e1a03c82b25495a8d 238 Pfam PF00005 ABC transporter 26 172 1.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0259 e970ad65ca68812e1a03c82b25495a8d 238 SMART SM00382 35 222 1.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3022 5366b0fc22a4ac10957e1def82386a67 78 Hamap MF_01542 UPF0349 protein . 1 77 29.003 T 12-10-2018 IPR022916 Protein of unknown function UPF0349 BAMF_3022 5366b0fc22a4ac10957e1def82386a67 78 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 1 77 8.0E-35 T 12-10-2018 BAMF_3022 5366b0fc22a4ac10957e1def82386a67 78 Pfam PF07293 Protein of unknown function (DUF1450) 1 75 7.2E-36 T 12-10-2018 IPR009910 Protein of unknown function DUF1450 BAMF_1076 15b8f1fcfa59f4f4a4b9aceeacd278e5 404 Pfam PF00999 Sodium/hydrogen exchanger family 12 378 3.9E-60 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BAMF_1076 15b8f1fcfa59f4f4a4b9aceeacd278e5 404 Gene3D G3DSA:1.20.1530.20 2 385 7.0E-65 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily BAMF_3553 ab9c63e0d8a94075a6a249c490abebae 175 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 14 81 5.1E-14 T 12-10-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 BAMF_3553 ab9c63e0d8a94075a6a249c490abebae 175 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 12 93 3.9E-33 T 12-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 BAMF_3553 ab9c63e0d8a94075a6a249c490abebae 175 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 171 16.656 T 12-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 BAMF_3553 ab9c63e0d8a94075a6a249c490abebae 175 Gene3D G3DSA:1.10.10.1250 2 82 3.0E-33 T 12-10-2018 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily BAMF_1030 569d893f2d3b7410e734f8add7a4ae5a 174 Pfam PF03358 NADPH-dependent FMN reductase 1 135 4.7E-30 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BAMF_1030 569d893f2d3b7410e734f8add7a4ae5a 174 SUPERFAMILY SSF52218 1 168 4.38E-38 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_1030 569d893f2d3b7410e734f8add7a4ae5a 174 Gene3D G3DSA:3.40.50.360 1 174 1.3E-47 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 Pfam PF00390 Malic enzyme, N-terminal domain 82 264 1.3E-72 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 Gene3D G3DSA:3.40.50.720 272 565 1.1E-106 T 12-10-2018 BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 SMART SM01274 82 264 2.7E-92 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 Pfam PF03949 Malic enzyme, NAD binding domain 274 534 4.5E-102 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 PRINTS PR00072 Malic enzyme signature 88 112 5.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 PRINTS PR00072 Malic enzyme signature 270 286 5.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 PRINTS PR00072 Malic enzyme signature 186 208 5.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 PRINTS PR00072 Malic enzyme signature 150 179 5.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 PRINTS PR00072 Malic enzyme signature 245 263 5.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 PRINTS PR00072 Malic enzyme signature 301 317 5.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 PRINTS PR00072 Malic enzyme signature 412 428 5.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 SUPERFAMILY SSF53223 5 273 7.91E-102 T 12-10-2018 BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 PIRSF PIRSF000106 2 565 5.7E-227 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 SMART SM00919 274 534 1.3E-117 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 ProSitePatterns PS00331 Malic enzymes signature. 270 286 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 SUPERFAMILY SSF51735 274 562 1.84E-91 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3542 c74575f70b3b4c523d0828b02eea2c97 565 Gene3D G3DSA:3.40.50.10380 16 271 4.6E-102 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 BAMF_0058 ae9184dc3b7046d9ca2ed90ee0fa5d22 491 TIGRFAM TIGR00444 mazG: MazG family protein 240 485 2.3E-117 T 12-10-2018 IPR011551 NTP pyrophosphohydrolase MazG BAMF_0058 ae9184dc3b7046d9ca2ed90ee0fa5d22 491 Gene3D G3DSA:3.40.1010.10 1 119 4.5E-12 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BAMF_0058 ae9184dc3b7046d9ca2ed90ee0fa5d22 491 PIRSF PIRSF002845 1 489 2.2E-226 T 12-10-2018 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted BAMF_0058 ae9184dc3b7046d9ca2ed90ee0fa5d22 491 SUPERFAMILY SSF101386 363 464 9.53E-23 T 12-10-2018 BAMF_0058 ae9184dc3b7046d9ca2ed90ee0fa5d22 491 Gene3D G3DSA:1.10.287.1080 357 489 2.6E-46 T 12-10-2018 BAMF_0058 ae9184dc3b7046d9ca2ed90ee0fa5d22 491 Gene3D G3DSA:1.10.287.1080 230 354 3.3E-43 T 12-10-2018 BAMF_0058 ae9184dc3b7046d9ca2ed90ee0fa5d22 491 SUPERFAMILY SSF53790 3 258 5.38E-35 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BAMF_0058 ae9184dc3b7046d9ca2ed90ee0fa5d22 491 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 207 1.4E-28 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BAMF_0058 ae9184dc3b7046d9ca2ed90ee0fa5d22 491 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 396 454 5.0E-5 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BAMF_0058 ae9184dc3b7046d9ca2ed90ee0fa5d22 491 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 256 329 2.2E-28 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BAMF_0058 ae9184dc3b7046d9ca2ed90ee0fa5d22 491 SUPERFAMILY SSF101386 233 333 8.0E-26 T 12-10-2018 BAMF_0606 97001f865b3964611f18227ed926365a 353 Pfam PF00107 Zinc-binding dehydrogenase 183 311 3.8E-35 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BAMF_0606 97001f865b3964611f18227ed926365a 353 Gene3D G3DSA:3.40.50.720 160 297 2.2E-121 T 12-10-2018 BAMF_0606 97001f865b3964611f18227ed926365a 353 SMART SM00829 15 349 2.9E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BAMF_0606 97001f865b3964611f18227ed926365a 353 Gene3D G3DSA:3.90.180.10 18 336 2.2E-121 T 12-10-2018 BAMF_0606 97001f865b3964611f18227ed926365a 353 SUPERFAMILY SSF50129 8 180 1.67E-60 T 12-10-2018 IPR011032 GroES-like superfamily BAMF_0606 97001f865b3964611f18227ed926365a 353 SUPERFAMILY SSF51735 149 315 9.11E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0606 97001f865b3964611f18227ed926365a 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BAMF_0606 97001f865b3964611f18227ed926365a 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 142 7.2E-35 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BAMF_2289 40352c34482f5f4bc8fa9a9a953bb009 278 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 65 260 8.3E-52 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2289 40352c34482f5f4bc8fa9a9a953bb009 278 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 264 27.783 T 12-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 BAMF_2289 40352c34482f5f4bc8fa9a9a953bb009 278 Pfam PF02096 60Kd inner membrane protein 65 260 4.3E-48 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BAMF_2142 817aeeb39d4503305f07fd6af48ab3bc 286 Pfam PF02569 Pantoate-beta-alanine ligase 4 277 1.0E-97 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BAMF_2142 817aeeb39d4503305f07fd6af48ab3bc 286 Gene3D G3DSA:3.40.50.620 2 177 3.4E-71 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_2142 817aeeb39d4503305f07fd6af48ab3bc 286 SUPERFAMILY SSF52374 1 280 2.11E-101 T 12-10-2018 BAMF_2142 817aeeb39d4503305f07fd6af48ab3bc 286 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 279 1.3E-118 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BAMF_2142 817aeeb39d4503305f07fd6af48ab3bc 286 Gene3D G3DSA:3.30.1300.10 178 276 1.1E-30 T 12-10-2018 BAMF_2142 817aeeb39d4503305f07fd6af48ab3bc 286 Hamap MF_00158 Pantothenate synthetase [panC]. 2 278 37.931 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BAMF_2142 817aeeb39d4503305f07fd6af48ab3bc 286 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 75 1.9E-8 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BAMF_0943 a461c05e343ea172bcccc15decba7538 367 Pfam PF17236 Family of unknown function (DUF5309) 127 352 7.2E-27 T 12-10-2018 IPR035198 Protein of unknown function DUF5309 BAMF_0943 a461c05e343ea172bcccc15decba7538 367 SUPERFAMILY SSF56563 148 277 8.5E-5 T 12-10-2018 BAMF_2005 3a2e33aa8db389aa3fe3c4acb9ceacfd 445 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 28 42 - T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BAMF_2005 3a2e33aa8db389aa3fe3c4acb9ceacfd 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 2.8E-15 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BAMF_2005 3a2e33aa8db389aa3fe3c4acb9ceacfd 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 2.8E-15 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BAMF_2005 3a2e33aa8db389aa3fe3c4acb9ceacfd 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 87 113 2.8E-15 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BAMF_2005 3a2e33aa8db389aa3fe3c4acb9ceacfd 445 SUPERFAMILY SSF161070 5 442 1.01E-128 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 BAMF_2005 3a2e33aa8db389aa3fe3c4acb9ceacfd 445 Pfam PF00209 Sodium:neurotransmitter symporter family 5 124 4.3E-27 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BAMF_2005 3a2e33aa8db389aa3fe3c4acb9ceacfd 445 Pfam PF00209 Sodium:neurotransmitter symporter family 148 440 1.6E-25 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 BAMF_2388 175955e24233468cac95922e51d10b62 454 Pfam PF03553 Na+/H+ antiporter family 159 451 1.9E-68 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BAMF_2388 175955e24233468cac95922e51d10b62 454 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 451 2.0E-136 T 12-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 BAMF_2582 a86743c838899db50345dc328944a57e 342 Pfam PF02547 Queuosine biosynthesis protein 4 341 5.5E-141 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BAMF_2582 a86743c838899db50345dc328944a57e 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 342 1.2E-155 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BAMF_2582 a86743c838899db50345dc328944a57e 342 SUPERFAMILY SSF111337 1 342 5.49E-139 T 12-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BAMF_2582 a86743c838899db50345dc328944a57e 342 Gene3D G3DSA:2.40.10.240 64 162 8.1E-138 T 12-10-2018 BAMF_2582 a86743c838899db50345dc328944a57e 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 46.782 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BAMF_2582 a86743c838899db50345dc328944a57e 342 Gene3D G3DSA:3.40.1780.10 14 341 8.1E-138 T 12-10-2018 BAMF_0139 282aa395aea73944db10ffebf2ea0e27 72 SMART SM00316 4 72 1.5E-6 T 12-10-2018 IPR022967 RNA-binding domain, S1 BAMF_0139 282aa395aea73944db10ffebf2ea0e27 72 SUPERFAMILY SSF50249 1 71 4.65E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_0139 282aa395aea73944db10ffebf2ea0e27 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 4.6E-40 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BAMF_0139 282aa395aea73944db10ffebf2ea0e27 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 9.2E-29 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 BAMF_0139 282aa395aea73944db10ffebf2ea0e27 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 28.425 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BAMF_0139 282aa395aea73944db10ffebf2ea0e27 72 Gene3D G3DSA:2.40.50.140 1 72 1.5E-38 T 12-10-2018 BAMF_1453 c1dd677e61a7ad62726b3282f69a9040 146 Gene3D G3DSA:3.30.479.10 3 140 2.4E-28 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 BAMF_1453 c1dd677e61a7ad62726b3282f69a9040 146 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 16 110 5.5E-28 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BAMF_1453 c1dd677e61a7ad62726b3282f69a9040 146 PIRSF PIRSF006113 13 140 3.2E-19 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BAMF_1453 c1dd677e61a7ad62726b3282f69a9040 146 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 15 141 7.2E-40 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BAMF_1453 c1dd677e61a7ad62726b3282f69a9040 146 SUPERFAMILY SSF55620 11 139 2.33E-31 T 12-10-2018 BAMF_1453 c1dd677e61a7ad62726b3282f69a9040 146 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 17 138 3.0E-27 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BAMF_3311 f3086e8208d320de320f34f87190aa9f 458 Pfam PF00083 Sugar (and other) transporter 25 444 1.4E-35 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BAMF_3311 f3086e8208d320de320f34f87190aa9f 458 SUPERFAMILY SSF103473 10 444 1.06E-74 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3311 f3086e8208d320de320f34f87190aa9f 458 Gene3D G3DSA:1.20.1250.20 18 435 1.6E-70 T 12-10-2018 BAMF_3283 d0e30a5ec10f8d21cb049fd3f6dd8e91 367 Pfam PF14897 EpsG family 38 362 1.9E-54 T 12-10-2018 BAMF_3738 eebd55c6d13f7c31682609043433e70c 133 Pfam PF14176 YxiJ-like protein 46 127 3.8E-24 T 12-10-2018 IPR025551 Immunity protein WapI-like BAMF_1200 f26ef9c00d0d5c7cdb39b63245413022 62 Pfam PF11151 Protein of unknown function (DUF2929) 2 55 2.1E-17 T 12-10-2018 IPR021324 Protein of unknown function DUF2929 BAMF_2459 a4f7084d1a650ab6f1c0f8d15c445713 245 Pfam PF13649 Methyltransferase domain 36 130 4.2E-21 T 12-10-2018 BAMF_2459 a4f7084d1a650ab6f1c0f8d15c445713 245 Gene3D G3DSA:3.40.50.150 6 238 6.7E-85 T 12-10-2018 BAMF_2459 a4f7084d1a650ab6f1c0f8d15c445713 245 Gene3D G3DSA:2.20.25.110 138 199 6.7E-85 T 12-10-2018 BAMF_2459 a4f7084d1a650ab6f1c0f8d15c445713 245 SUPERFAMILY SSF53335 3 241 3.77E-54 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_1866 85d65e2b072b5a30b807f0edfae13ff5 273 Pfam PF05908 Poly-gamma-glutamate hydrolase 75 262 1.5E-63 T 12-10-2018 IPR008585 Poly-gamma-glutamate hydrolase BAMF_1866 85d65e2b072b5a30b807f0edfae13ff5 273 Gene3D G3DSA:3.40.630.100 69 273 2.9E-59 T 12-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily BAMF_2348 91a954ffd02bbc6ce3f7f4af536c1198 93 Pfam PF10942 Protein of unknown function (DUF2619) 19 87 5.3E-26 T 12-10-2018 IPR020390 Uncharacterised protein family YqhV BAMF_2348 91a954ffd02bbc6ce3f7f4af536c1198 93 ProDom PD064940 YQHV TRANSMEMBRANE MEMBRANE BH2798 12 91 1.0E-33 T 12-10-2018 IPR020390 Uncharacterised protein family YqhV BAMF_2256 391623019f1554dc1f75d2903e83ab4f 117 SMART SM00530 5 60 3.3E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_2256 391623019f1554dc1f75d2903e83ab4f 117 Pfam PF01381 Helix-turn-helix 8 60 1.1E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_2256 391623019f1554dc1f75d2903e83ab4f 117 Gene3D G3DSA:1.10.260.40 4 115 2.7E-18 T 12-10-2018 BAMF_2256 391623019f1554dc1f75d2903e83ab4f 117 SUPERFAMILY SSF47413 4 66 9.92E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_2768 61f5e6d56b386cdfa9ca10c5cdabfd57 572 Gene3D G3DSA:3.30.300.30 458 571 1.2E-27 T 12-10-2018 BAMF_2768 61f5e6d56b386cdfa9ca10c5cdabfd57 572 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_2768 61f5e6d56b386cdfa9ca10c5cdabfd57 572 Gene3D G3DSA:3.40.50.12780 15 455 1.3E-117 T 12-10-2018 BAMF_2768 61f5e6d56b386cdfa9ca10c5cdabfd57 572 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 549 7.5E-24 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_2768 61f5e6d56b386cdfa9ca10c5cdabfd57 572 Pfam PF00501 AMP-binding enzyme 51 462 1.3E-90 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_2768 61f5e6d56b386cdfa9ca10c5cdabfd57 572 SUPERFAMILY SSF56801 15 562 2.22E-158 T 12-10-2018 BAMF_3560 ac455afc91b01e5ea29d35cc4b0abc38 222 Gene3D G3DSA:1.20.950.20 1 214 1.2E-79 T 12-10-2018 BAMF_3560 ac455afc91b01e5ea29d35cc4b0abc38 222 Pfam PF02665 Nitrate reductase gamma subunit 4 222 4.9E-86 T 12-10-2018 IPR023234 NarG-like domain BAMF_3560 ac455afc91b01e5ea29d35cc4b0abc38 222 SUPERFAMILY SSF103501 3 222 7.85E-70 T 12-10-2018 IPR036197 NarG-like superfamily BAMF_3560 ac455afc91b01e5ea29d35cc4b0abc38 222 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 222 4.9E-110 T 12-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 BAMF_0186 170f4e95fc82bfc7ac8e89b62e7bf13c 388 Pfam PF16226 Domain of unknown function (DUF4885) 59 381 5.6E-155 T 12-10-2018 IPR032617 Protein of unknown function DUF4885 BAMF_1478 3d1f2fd3802076b5789ca43bade25445 303 Pfam PF01584 CheW-like domain 19 152 1.1E-32 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BAMF_1478 3d1f2fd3802076b5789ca43bade25445 303 SMART SM00260 14 149 2.3E-35 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BAMF_1478 3d1f2fd3802076b5789ca43bade25445 303 Gene3D G3DSA:3.40.50.2300 174 302 6.4E-25 T 12-10-2018 BAMF_1478 3d1f2fd3802076b5789ca43bade25445 303 Gene3D G3DSA:2.30.30.40 20 143 6.3E-35 T 12-10-2018 BAMF_1478 3d1f2fd3802076b5789ca43bade25445 303 PIRSF PIRSF002867 2 303 1.6E-98 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV BAMF_1478 3d1f2fd3802076b5789ca43bade25445 303 SMART SM00448 175 297 9.6E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_1478 3d1f2fd3802076b5789ca43bade25445 303 Gene3D G3DSA:2.40.50.180 35 149 6.3E-35 T 12-10-2018 BAMF_1478 3d1f2fd3802076b5789ca43bade25445 303 Pfam PF00072 Response regulator receiver domain 178 297 2.1E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BAMF_1478 3d1f2fd3802076b5789ca43bade25445 303 SUPERFAMILY SSF50341 8 153 1.83E-32 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BAMF_1478 3d1f2fd3802076b5789ca43bade25445 303 SUPERFAMILY SSF52172 173 299 1.85E-24 T 12-10-2018 IPR011006 CheY-like superfamily BAMF_3034 d82ca5cdf83884fbd954403da54e7329 144 Pfam PF01934 Protein of unknown function DUF86 30 126 5.5E-20 T 12-10-2018 IPR008201 Protein of unknown function DUF86 BAMF_3034 d82ca5cdf83884fbd954403da54e7329 144 Gene3D G3DSA:1.20.120.580 1 144 1.8E-58 T 12-10-2018 IPR037038 Bsu32300-like superfamily BAMF_1798 1b92d557fb24304d1e36b3efb9feb9b7 119 Pfam PF00893 Small Multidrug Resistance protein 7 96 3.7E-29 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BAMF_1798 1b92d557fb24304d1e36b3efb9feb9b7 119 Gene3D G3DSA:1.10.3730.20 3 111 2.1E-35 T 12-10-2018 BAMF_1798 1b92d557fb24304d1e36b3efb9feb9b7 119 SUPERFAMILY SSF103481 8 108 5.89E-22 T 12-10-2018 BAMF_3887 4eb130c8a3f46e52a91fddbe18a60061 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 1.1E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3887 4eb130c8a3f46e52a91fddbe18a60061 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 1.1E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3887 4eb130c8a3f46e52a91fddbe18a60061 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.1E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3887 4eb130c8a3f46e52a91fddbe18a60061 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 1.1E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3887 4eb130c8a3f46e52a91fddbe18a60061 144 SMART SM00347 25 125 4.4E-28 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3887 4eb130c8a3f46e52a91fddbe18a60061 144 SUPERFAMILY SSF46785 11 140 8.73E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3887 4eb130c8a3f46e52a91fddbe18a60061 144 Pfam PF01047 MarR family 32 89 1.1E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_3887 4eb130c8a3f46e52a91fddbe18a60061 144 Gene3D G3DSA:1.10.10.10 6 143 1.9E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0630 bbe5d8d588c221b71d2d2a8a25c93dfe 480 Gene3D G3DSA:2.60.40.1630 74 214 5.3E-12 T 12-10-2018 BAMF_0630 bbe5d8d588c221b71d2d2a8a25c93dfe 480 Pfam PF13786 Domain of unknown function (DUF4179) 43 133 8.7E-13 T 12-10-2018 IPR025436 Domain of unknown function DUF4179 BAMF_1473 982034f87102bc75ab4739562547eeef 258 Pfam PF00188 Cysteine-rich secretory protein family 143 254 1.8E-22 T 12-10-2018 IPR014044 CAP domain BAMF_1473 982034f87102bc75ab4739562547eeef 258 Gene3D G3DSA:3.40.33.10 1 258 1.0E-66 T 12-10-2018 IPR035940 CAP superfamily BAMF_1473 982034f87102bc75ab4739562547eeef 258 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 135 257 5.5E-62 T 12-10-2018 IPR014258 CAP domain, YkwD-like BAMF_1473 982034f87102bc75ab4739562547eeef 258 SUPERFAMILY SSF55797 135 254 1.15E-25 T 12-10-2018 IPR035940 CAP superfamily BAMF_0150 d470e00e3b953777a926b9eaef6f01e8 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 35.386 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid BAMF_0150 d470e00e3b953777a926b9eaef6f01e8 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 5.2E-47 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 BAMF_0150 d470e00e3b953777a926b9eaef6f01e8 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 BAMF_0150 d470e00e3b953777a926b9eaef6f01e8 130 SUPERFAMILY SSF54211 5 130 1.14E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BAMF_0150 d470e00e3b953777a926b9eaef6f01e8 130 Gene3D G3DSA:3.30.230.10 1 130 6.2E-53 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BAMF_1364 85b9700087e4ac796d573cef2db76d39 132 Pfam PF09636 XkdW protein 76 126 4.3E-6 T 12-10-2018 IPR019094 Bacteriophage SP-beta, YorD BAMF_2944 1696cbeb77fc9ad322179db0c569de49 387 Gene3D G3DSA:3.90.1150.10 11 382 6.5E-149 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_2944 1696cbeb77fc9ad322179db0c569de49 387 SUPERFAMILY SSF53383 2 386 1.9E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_2944 1696cbeb77fc9ad322179db0c569de49 387 Gene3D G3DSA:3.40.640.10 66 290 6.5E-149 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_2944 1696cbeb77fc9ad322179db0c569de49 387 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 386 2.2E-147 T 12-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 BAMF_2944 1696cbeb77fc9ad322179db0c569de49 387 Pfam PF00155 Aminotransferase class I and II 42 382 1.0E-42 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BAMF_1603 560ad18249bb55eac3fa9e1b87913285 239 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 8 239 1.2E-133 T 12-10-2018 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_1603 560ad18249bb55eac3fa9e1b87913285 239 Gene3D G3DSA:1.10.10.10 167 239 1.4E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1603 560ad18249bb55eac3fa9e1b87913285 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 58 234 7.2E-36 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_1603 560ad18249bb55eac3fa9e1b87913285 239 Pfam PF04542 Sigma-70 region 2 62 131 1.8E-18 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_1603 560ad18249bb55eac3fa9e1b87913285 239 PIRSF PIRSF000770 1 239 1.4E-80 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1603 560ad18249bb55eac3fa9e1b87913285 239 PRINTS PR00046 Major sigma-70 factor signature 205 220 8.7E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1603 560ad18249bb55eac3fa9e1b87913285 239 PRINTS PR00046 Major sigma-70 factor signature 86 99 8.7E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1603 560ad18249bb55eac3fa9e1b87913285 239 PRINTS PR00046 Major sigma-70 factor signature 184 196 8.7E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1603 560ad18249bb55eac3fa9e1b87913285 239 PRINTS PR00046 Major sigma-70 factor signature 220 231 8.7E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1603 560ad18249bb55eac3fa9e1b87913285 239 SUPERFAMILY SSF88659 143 237 5.98E-22 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_1603 560ad18249bb55eac3fa9e1b87913285 239 Gene3D G3DSA:1.20.120.1810 28 131 2.7E-25 T 12-10-2018 BAMF_1603 560ad18249bb55eac3fa9e1b87913285 239 Pfam PF04545 Sigma-70, region 4 180 233 4.0E-17 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BAMF_1603 560ad18249bb55eac3fa9e1b87913285 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 86 99 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1603 560ad18249bb55eac3fa9e1b87913285 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BAMF_1603 560ad18249bb55eac3fa9e1b87913285 239 SUPERFAMILY SSF88946 18 131 3.66E-35 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BAMF_3492 8ba0e2ad8e0f82cf30aa0ccdb721744a 116 Gene3D G3DSA:3.30.70.120 1 116 9.1E-44 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BAMF_3492 8ba0e2ad8e0f82cf30aa0ccdb721744a 116 SUPERFAMILY SSF54913 5 116 1.72E-33 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BAMF_3492 8ba0e2ad8e0f82cf30aa0ccdb721744a 116 ProSitePatterns PS00638 P-II protein C-terminal region signature. 87 100 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 BAMF_3492 8ba0e2ad8e0f82cf30aa0ccdb721744a 116 SMART SM00938 8 109 4.8E-38 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BAMF_3492 8ba0e2ad8e0f82cf30aa0ccdb721744a 116 PRINTS PR00340 P-II protein signature 6 21 2.2E-21 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BAMF_3492 8ba0e2ad8e0f82cf30aa0ccdb721744a 116 PRINTS PR00340 P-II protein signature 87 107 2.2E-21 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BAMF_3492 8ba0e2ad8e0f82cf30aa0ccdb721744a 116 PRINTS PR00340 P-II protein signature 27 45 2.2E-21 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BAMF_3492 8ba0e2ad8e0f82cf30aa0ccdb721744a 116 PRINTS PR00340 P-II protein signature 56 79 2.2E-21 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BAMF_3492 8ba0e2ad8e0f82cf30aa0ccdb721744a 116 Pfam PF00543 Nitrogen regulatory protein P-II 8 109 6.9E-32 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BAMF_1513 a34b3dd449ac14b8e1c86ecaf6f7d6d1 303 PIRSF PIRSF000535 1 303 2.1E-103 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 BAMF_1513 a34b3dd449ac14b8e1c86ecaf6f7d6d1 303 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 1.1E-107 T 12-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 BAMF_1513 a34b3dd449ac14b8e1c86ecaf6f7d6d1 303 SUPERFAMILY SSF53613 1 282 6.08E-69 T 12-10-2018 IPR029056 Ribokinase-like BAMF_1513 a34b3dd449ac14b8e1c86ecaf6f7d6d1 303 Pfam PF00294 pfkB family carbohydrate kinase 12 284 6.9E-61 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB BAMF_1513 a34b3dd449ac14b8e1c86ecaf6f7d6d1 303 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BAMF_1513 a34b3dd449ac14b8e1c86ecaf6f7d6d1 303 Gene3D G3DSA:3.40.1190.20 1 303 1.4E-106 T 12-10-2018 IPR029056 Ribokinase-like BAMF_1513 a34b3dd449ac14b8e1c86ecaf6f7d6d1 303 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 301 1.2E-108 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 BAMF_1022 66c72f6e107010b7f99ba17a20265c42 447 Pfam PF00202 Aminotransferase class-III 31 440 2.5E-106 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_1022 66c72f6e107010b7f99ba17a20265c42 447 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 246 283 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_1022 66c72f6e107010b7f99ba17a20265c42 447 PIRSF PIRSF000521 30 445 1.3E-31 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BAMF_1022 66c72f6e107010b7f99ba17a20265c42 447 SUPERFAMILY SSF53383 21 441 2.06E-123 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_1022 66c72f6e107010b7f99ba17a20265c42 447 Gene3D G3DSA:3.90.1150.10 15 442 4.3E-148 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_1022 66c72f6e107010b7f99ba17a20265c42 447 Gene3D G3DSA:3.40.640.10 65 335 4.3E-148 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_0406 47c6878d5bf05d5c062decca4ddf2485 83 Pfam PF10852 Protein of unknown function (DUF2651) 6 76 7.8E-11 T 12-10-2018 IPR020258 Uncharacterised protein family YbeF BAMF_1691 1f3342e964786ec68e00f5e26df11f2a 106 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 3 106 2.7E-38 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BAMF_1691 1f3342e964786ec68e00f5e26df11f2a 106 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 106 18.999 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BAMF_1691 1f3342e964786ec68e00f5e26df11f2a 106 Pfam PF02049 Flagellar hook-basal body complex protein FliE 21 106 2.3E-28 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BAMF_1691 1f3342e964786ec68e00f5e26df11f2a 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 36 52 1.4E-18 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BAMF_1691 1f3342e964786ec68e00f5e26df11f2a 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 91 104 1.4E-18 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BAMF_1691 1f3342e964786ec68e00f5e26df11f2a 106 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 70 86 1.4E-18 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BAMF_0645 8e78e8864299acc3e243783514658fcd 195 Gene3D G3DSA:3.40.50.170 1 193 1.9E-70 T 12-10-2018 BAMF_0645 8e78e8864299acc3e243783514658fcd 195 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BAMF_0645 8e78e8864299acc3e243783514658fcd 195 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 30.129 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 BAMF_0645 8e78e8864299acc3e243783514658fcd 195 Pfam PF00551 Formyl transferase 2 182 1.8E-62 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BAMF_0645 8e78e8864299acc3e243783514658fcd 195 SUPERFAMILY SSF53328 2 186 1.7E-59 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BAMF_0645 8e78e8864299acc3e243783514658fcd 195 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 190 7.5E-75 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 BAMF_2776 e2223d604a10252ac8fe7ec8c4455727 108 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 6 105 7.7E-38 T 12-10-2018 IPR022551 Protein of unknown function DUF2847 BAMF_2776 e2223d604a10252ac8fe7ec8c4455727 108 SUPERFAMILY SSF52833 5 107 1.24E-10 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_2776 e2223d604a10252ac8fe7ec8c4455727 108 Pfam PF11009 Protein of unknown function (DUF2847) 6 103 2.0E-36 T 12-10-2018 IPR022551 Protein of unknown function DUF2847 BAMF_2776 e2223d604a10252ac8fe7ec8c4455727 108 Gene3D G3DSA:3.40.30.10 2 106 5.2E-38 T 12-10-2018 BAMF_0063 533b223e142744753a58f2b9639e8a19 128 Pfam PF00575 S1 RNA binding domain 4 74 8.2E-22 T 12-10-2018 IPR003029 S1 domain GO:0003676 BAMF_0063 533b223e142744753a58f2b9639e8a19 128 Gene3D G3DSA:2.40.50.140 1 84 9.1E-30 T 12-10-2018 BAMF_0063 533b223e142744753a58f2b9639e8a19 128 SUPERFAMILY SSF50249 4 84 3.36E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_0063 533b223e142744753a58f2b9639e8a19 128 SMART SM00316 4 74 1.9E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 BAMF_1557 e8fced5b7b33de6a26a6edb936eb7b77 315 TIGRFAM TIGR03814 Gln_ase: glutaminase A 9 309 3.0E-123 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BAMF_1557 e8fced5b7b33de6a26a6edb936eb7b77 315 Hamap MF_00313 Glutaminase [glsA]. 5 309 45.336 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BAMF_1557 e8fced5b7b33de6a26a6edb936eb7b77 315 SUPERFAMILY SSF56601 7 309 3.42E-113 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_1557 e8fced5b7b33de6a26a6edb936eb7b77 315 Pfam PF04960 Glutaminase 23 309 2.5E-111 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BAMF_1557 e8fced5b7b33de6a26a6edb936eb7b77 315 Gene3D G3DSA:3.40.710.10 4 310 9.9E-113 T 12-10-2018 BAMF_1851 c0b29bb618120dbff8dd4a0b51a10fdb 96 Pfam PF13217 Protein of unknown function (DUF4025) 48 96 2.5E-24 T 12-10-2018 IPR025100 Protein of unknown function DUF4025 BAMF_1863 76dcfec0246fc46ca9243255203d6b3e 79 Pfam PF05154 TM2 domain 3 54 2.6E-20 T 12-10-2018 IPR007829 TM2 domain BAMF_1832 5f540103b775252388f0903e18164186 153 SUPERFAMILY SSF46689 6 64 6.14E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_1832 5f540103b775252388f0903e18164186 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 57 1.3E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_1832 5f540103b775252388f0903e18164186 153 Gene3D G3DSA:1.10.357.10 5 153 2.1E-29 T 12-10-2018 BAMF_0283 d40b60043b66eea98b39b741e68fc9a6 253 Pfam PF08892 YqcI/YcgG family 37 243 9.6E-75 T 12-10-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG BAMF_2234 3ce968b5446cc396d049a98928d2e485 493 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 28 479 9.8E-153 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BAMF_2234 3ce968b5446cc396d049a98928d2e485 493 PIRSF PIRSF005690 6 493 1.2E-145 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BAMF_2316 91ba0ddacacd841a59c5a3fdfde772cc 245 SUPERFAMILY SSF51695 2 238 8.11E-72 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BAMF_2316 91ba0ddacacd841a59c5a3fdfde772cc 245 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 234 1.1E-51 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BAMF_2316 91ba0ddacacd841a59c5a3fdfde772cc 245 Gene3D G3DSA:3.20.20.190 1 243 3.1E-80 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BAMF_1031 394a09942028efb61d74bf7c495443cf 80 Pfam PF14148 YhdB-like protein 1 70 2.2E-38 T 12-10-2018 IPR025431 YhdB-like protein BAMF_1966 4cf24613d7cecfa84bde765e7a37380d 68 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 1.5E-22 T 12-10-2018 IPR012452 Protein of unknown function DUF1657 BAMF_1966 4cf24613d7cecfa84bde765e7a37380d 68 Gene3D G3DSA:1.20.1260.10 1 68 1.2E-5 T 12-10-2018 IPR012347 Ferritin-like BAMF_1838 4cf24613d7cecfa84bde765e7a37380d 68 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 1.5E-22 T 12-10-2018 IPR012452 Protein of unknown function DUF1657 BAMF_1838 4cf24613d7cecfa84bde765e7a37380d 68 Gene3D G3DSA:1.20.1260.10 1 68 1.2E-5 T 12-10-2018 IPR012347 Ferritin-like BAMF_3817 4cf24613d7cecfa84bde765e7a37380d 68 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 1.5E-22 T 12-10-2018 IPR012452 Protein of unknown function DUF1657 BAMF_3817 4cf24613d7cecfa84bde765e7a37380d 68 Gene3D G3DSA:1.20.1260.10 1 68 1.2E-5 T 12-10-2018 IPR012347 Ferritin-like BAMF_1409 395b35cc482e23ceb3055eda90d5e73e 277 Gene3D G3DSA:3.30.750.24 163 277 1.5E-34 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_1409 395b35cc482e23ceb3055eda90d5e73e 277 SUPERFAMILY SSF52091 167 275 1.88E-14 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_1409 395b35cc482e23ceb3055eda90d5e73e 277 Pfam PF01740 STAS domain 175 271 1.7E-13 T 12-10-2018 IPR002645 STAS domain BAMF_0633 8ae7f2039b2809f6badf1db4f3f979bb 57 Pfam PF13076 Fur-regulated basic protein A 12 46 6.6E-11 T 12-10-2018 IPR025072 Fur-regulated basic protein A BAMF_3062 ccc42912aa2466456b31296f1d425224 124 PIRSF PIRSF026568 1 124 1.5E-70 T 12-10-2018 IPR014527 Excinuclease GIY-YIG catalytic domain-containing uncharacterised conserved protein BAMF_3062 ccc42912aa2466456b31296f1d425224 124 SUPERFAMILY SSF82771 42 120 1.23E-14 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BAMF_3062 ccc42912aa2466456b31296f1d425224 124 SMART SM00465 43 122 1.1E-13 T 12-10-2018 IPR000305 GIY-YIG endonuclease BAMF_3062 ccc42912aa2466456b31296f1d425224 124 Pfam PF01541 GIY-YIG catalytic domain 43 117 1.7E-11 T 12-10-2018 IPR000305 GIY-YIG endonuclease BAMF_3062 ccc42912aa2466456b31296f1d425224 124 Gene3D G3DSA:3.40.1440.10 34 122 3.2E-14 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BAMF_0034 6cc5f85a0d7161312e5faa2c48ea5bd7 247 SUPERFAMILY SSF53335 16 198 1.79E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_0034 6cc5f85a0d7161312e5faa2c48ea5bd7 247 Pfam PF05175 Methyltransferase small domain 19 140 1.3E-9 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BAMF_0034 6cc5f85a0d7161312e5faa2c48ea5bd7 247 Gene3D G3DSA:3.40.50.150 8 247 2.7E-71 T 12-10-2018 BAMF_2352 110f86f163a8e4f4620168fea31e2440 318 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 57 296 3.0E-122 T 12-10-2018 IPR010787 Protein of unknown function DUF1385 BAMF_2352 110f86f163a8e4f4620168fea31e2440 318 Pfam PF07136 Protein of unknown function (DUF1385) 57 301 7.6E-78 T 12-10-2018 IPR010787 Protein of unknown function DUF1385 BAMF_2672 fd3755a65566c455fa538c7880af190e 71 Hamap MF_00669 Small, acid-soluble spore protein I [sspI]. 1 68 21.522 T 12-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 BAMF_2672 fd3755a65566c455fa538c7880af190e 71 TIGRFAM TIGR03092 SASP_sspI: small, acid-soluble spore protein I 4 68 4.9E-33 T 12-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 BAMF_2672 fd3755a65566c455fa538c7880af190e 71 Pfam PF14098 Small, acid-soluble spore protein I 3 66 5.2E-30 T 12-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 BAMF_3143 dd87b4a69c9ea7af44eb807ca5e6c502 291 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BAMF_3143 dd87b4a69c9ea7af44eb807ca5e6c502 291 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 1.1E-19 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_3143 dd87b4a69c9ea7af44eb807ca5e6c502 291 SUPERFAMILY SSF46689 4 77 1.55E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_3143 dd87b4a69c9ea7af44eb807ca5e6c502 291 Gene3D G3DSA:1.10.357.10 1 192 1.6E-29 T 12-10-2018 BAMF_3143 dd87b4a69c9ea7af44eb807ca5e6c502 291 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 9.9E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_3143 dd87b4a69c9ea7af44eb807ca5e6c502 291 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 9.9E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_0644 3887cf4185076538661b1cd8cb39da0c 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 343 47.936 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BAMF_0644 3887cf4185076538661b1cd8cb39da0c 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 338 3.7E-37 T 12-10-2018 IPR010918 PurM-like, C-terminal domain BAMF_0644 3887cf4185076538661b1cd8cb39da0c 346 SUPERFAMILY SSF55326 4 166 1.94E-48 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BAMF_0644 3887cf4185076538661b1cd8cb39da0c 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 334 2.6E-150 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BAMF_0644 3887cf4185076538661b1cd8cb39da0c 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 72 160 1.4E-16 T 12-10-2018 IPR016188 PurM-like, N-terminal domain BAMF_0644 3887cf4185076538661b1cd8cb39da0c 346 Gene3D G3DSA:3.30.1330.10 1 167 4.7E-67 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BAMF_0644 3887cf4185076538661b1cd8cb39da0c 346 SUPERFAMILY SSF56042 169 338 4.04E-59 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BAMF_0644 3887cf4185076538661b1cd8cb39da0c 346 Gene3D G3DSA:3.90.650.10 168 345 5.1E-72 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BAMF_0039 257ff14591611b37035c576690cd77de 256 PIRSF PIRSF005902 1 256 1.3E-92 T 12-10-2018 IPR001130 TatD family GO:0016788 BAMF_0039 257ff14591611b37035c576690cd77de 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BAMF_0039 257ff14591611b37035c576690cd77de 256 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BAMF_0039 257ff14591611b37035c576690cd77de 256 SUPERFAMILY SSF51556 1 255 5.65E-99 T 12-10-2018 IPR032466 Metal-dependent hydrolase BAMF_0039 257ff14591611b37035c576690cd77de 256 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BAMF_0039 257ff14591611b37035c576690cd77de 256 Gene3D G3DSA:3.20.20.140 2 256 1.0E-114 T 12-10-2018 BAMF_0039 257ff14591611b37035c576690cd77de 256 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 254 2.0E-104 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 BAMF_0039 257ff14591611b37035c576690cd77de 256 Pfam PF01026 TatD related DNase 4 253 2.3E-91 T 12-10-2018 IPR001130 TatD family GO:0016788 BAMF_2981 10d0ddf1cc1ea927700ebec8e8a4fa7b 243 Gene3D G3DSA:3.40.50.720 2 240 3.5E-47 T 12-10-2018 BAMF_2981 10d0ddf1cc1ea927700ebec8e8a4fa7b 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.0E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2981 10d0ddf1cc1ea927700ebec8e8a4fa7b 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.0E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2981 10d0ddf1cc1ea927700ebec8e8a4fa7b 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.0E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2981 10d0ddf1cc1ea927700ebec8e8a4fa7b 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.0E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2981 10d0ddf1cc1ea927700ebec8e8a4fa7b 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.0E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2981 10d0ddf1cc1ea927700ebec8e8a4fa7b 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_2981 10d0ddf1cc1ea927700ebec8e8a4fa7b 243 SUPERFAMILY SSF51735 4 230 1.4E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2981 10d0ddf1cc1ea927700ebec8e8a4fa7b 243 Pfam PF00106 short chain dehydrogenase 4 192 6.1E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2293 1c8b74c304f86d437139424cf6d7796e 176 Pfam PF03734 L,D-transpeptidase catalytic domain 27 150 2.3E-20 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 BAMF_2293 1c8b74c304f86d437139424cf6d7796e 176 SUPERFAMILY SSF141523 23 151 4.19E-31 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BAMF_2293 1c8b74c304f86d437139424cf6d7796e 176 Gene3D G3DSA:2.40.440.10 9 175 8.4E-40 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BAMF_0751 4f49a2e52b2177733fdd236e2c442b18 379 Pfam PF07907 YibE/F-like protein 136 368 5.6E-71 T 12-10-2018 IPR012507 YibE/F-like BAMF_3750 6c7c8c16349d8f05070e4235a8833b2c 141 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 116 1.1E-41 T 12-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 BAMF_3750 6c7c8c16349d8f05070e4235a8833b2c 141 Gene3D G3DSA:3.40.960.10 20 141 1.8E-39 T 12-10-2018 BAMF_3750 6c7c8c16349d8f05070e4235a8833b2c 141 SUPERFAMILY SSF52980 3 134 1.72E-44 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BAMF_3750 6c7c8c16349d8f05070e4235a8833b2c 141 PIRSF PIRSF018267 1 141 1.2E-49 T 12-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 BAMF_3750 6c7c8c16349d8f05070e4235a8833b2c 141 Pfam PF03852 DNA mismatch endonuclease Vsr 3 70 1.7E-24 T 12-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 BAMF_0432 a6bf94605dbdaa0bae033c6dce1d3f63 105 PIRSF PIRSF000077 1 105 4.0E-20 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BAMF_0432 a6bf94605dbdaa0bae033c6dce1d3f63 105 SUPERFAMILY SSF52833 2 105 3.89E-27 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_0432 a6bf94605dbdaa0bae033c6dce1d3f63 105 Pfam PF00085 Thioredoxin 5 103 2.3E-19 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 BAMF_0432 a6bf94605dbdaa0bae033c6dce1d3f63 105 Gene3D G3DSA:3.40.30.10 1 105 4.1E-25 T 12-10-2018 BAMF_3056 af29ff9f227b6a42a458c720cb45425a 328 PIRSF PIRSF009290 2 328 3.2E-93 T 12-10-2018 IPR024713 Fructosamine deglycase FrlB BAMF_3056 af29ff9f227b6a42a458c720cb45425a 328 Gene3D G3DSA:3.40.50.12570 193 286 1.7E-65 T 12-10-2018 BAMF_3056 af29ff9f227b6a42a458c720cb45425a 328 Gene3D G3DSA:3.40.50.10490 1 155 2.1E-45 T 12-10-2018 BAMF_3056 af29ff9f227b6a42a458c720cb45425a 328 SUPERFAMILY SSF53697 22 328 1.58E-60 T 12-10-2018 BAMF_3056 af29ff9f227b6a42a458c720cb45425a 328 Gene3D G3DSA:1.10.10.2240 158 310 1.7E-65 T 12-10-2018 BAMF_3056 af29ff9f227b6a42a458c720cb45425a 328 Pfam PF01380 SIS domain 25 125 7.6E-13 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BAMF_3422 89df74d493fa541a26373b6bbbd2ddab 460 ProSitePatterns PS00216 Sugar transport proteins signature 1. 296 312 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_3422 89df74d493fa541a26373b6bbbd2ddab 460 ProSitePatterns PS00217 Sugar transport proteins signature 2. 106 131 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_3422 89df74d493fa541a26373b6bbbd2ddab 460 SUPERFAMILY SSF103473 7 438 1.7E-83 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3422 89df74d493fa541a26373b6bbbd2ddab 460 Pfam PF00083 Sugar (and other) transporter 12 439 3.7E-125 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BAMF_3422 89df74d493fa541a26373b6bbbd2ddab 460 PRINTS PR00171 Sugar transporter signature 252 262 1.1E-25 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3422 89df74d493fa541a26373b6bbbd2ddab 460 PRINTS PR00171 Sugar transporter signature 18 28 1.1E-25 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3422 89df74d493fa541a26373b6bbbd2ddab 460 PRINTS PR00171 Sugar transporter signature 341 362 1.1E-25 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3422 89df74d493fa541a26373b6bbbd2ddab 460 PRINTS PR00171 Sugar transporter signature 101 120 1.1E-25 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3422 89df74d493fa541a26373b6bbbd2ddab 460 PRINTS PR00171 Sugar transporter signature 364 376 1.1E-25 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_3422 89df74d493fa541a26373b6bbbd2ddab 460 Gene3D G3DSA:1.20.1250.20 5 441 6.5E-138 T 12-10-2018 BAMF_3422 89df74d493fa541a26373b6bbbd2ddab 460 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 12 436 4.5E-117 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BAMF_0774 49014be0381786331c44bed1abf13619 287 Gene3D G3DSA:1.10.1670.40 99 284 4.8E-50 T 12-10-2018 BAMF_0774 49014be0381786331c44bed1abf13619 287 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 124 271 1.5E-18 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BAMF_0774 49014be0381786331c44bed1abf13619 287 SMART SM00478 127 287 4.4E-27 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BAMF_0774 49014be0381786331c44bed1abf13619 287 Gene3D G3DSA:1.10.340.30 116 234 4.8E-50 T 12-10-2018 BAMF_0774 49014be0381786331c44bed1abf13619 287 SUPERFAMILY SSF48150 107 285 2.97E-39 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BAMF_0311 a575700cfaeb19cc8f72bcb504e9683c 120 SUPERFAMILY SSF46785 5 106 1.06E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0311 a575700cfaeb19cc8f72bcb504e9683c 120 Gene3D G3DSA:1.10.10.10 1 118 2.7E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0311 a575700cfaeb19cc8f72bcb504e9683c 120 Pfam PF01638 HxlR-like helix-turn-helix 19 107 5.6E-39 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type BAMF_3130 9717a00ad0d62678805be0348307071d 531 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 6.6E-15 T 12-10-2018 BAMF_3130 9717a00ad0d62678805be0348307071d 531 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 6.6E-15 T 12-10-2018 BAMF_3130 9717a00ad0d62678805be0348307071d 531 PRINTS PR01036 Tetracycline resistance protein TetB signature 301 325 6.6E-15 T 12-10-2018 BAMF_3130 9717a00ad0d62678805be0348307071d 531 PRINTS PR01036 Tetracycline resistance protein TetB signature 399 418 6.6E-15 T 12-10-2018 BAMF_3130 9717a00ad0d62678805be0348307071d 531 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 6.6E-15 T 12-10-2018 BAMF_3130 9717a00ad0d62678805be0348307071d 531 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_3130 9717a00ad0d62678805be0348307071d 531 Gene3D G3DSA:1.20.1250.20 253 425 3.3E-23 T 12-10-2018 BAMF_3130 9717a00ad0d62678805be0348307071d 531 SUPERFAMILY SSF103473 7 523 7.72E-74 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3130 9717a00ad0d62678805be0348307071d 531 Pfam PF07690 Major Facilitator Superfamily 17 408 4.8E-51 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_3130 9717a00ad0d62678805be0348307071d 531 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 435 3.8E-89 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BAMF_3130 9717a00ad0d62678805be0348307071d 531 Gene3D G3DSA:1.20.1720.10 13 199 1.7E-48 T 12-10-2018 BAMF_3739 ae12b4dd30db59f62fd8e494e3b73155 286 SUPERFAMILY SSF63829 18 231 1.77E-5 T 12-10-2018 BAMF_0709 b6d48f6847f18fff5e29838bd6863bb7 140 SMART SM00422 4 74 1.1E-30 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_0709 b6d48f6847f18fff5e29838bd6863bb7 140 Pfam PF13411 MerR HTH family regulatory protein 4 72 1.5E-19 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_0709 b6d48f6847f18fff5e29838bd6863bb7 140 SUPERFAMILY SSF46955 4 116 6.96E-24 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BAMF_0709 b6d48f6847f18fff5e29838bd6863bb7 140 Gene3D G3DSA:1.10.1660.10 1 139 1.1E-29 T 12-10-2018 BAMF_0709 b6d48f6847f18fff5e29838bd6863bb7 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 2.7E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_0709 b6d48f6847f18fff5e29838bd6863bb7 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 2.7E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_0709 b6d48f6847f18fff5e29838bd6863bb7 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 2.7E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_1226 d441a8ada395df4aeea20a384815793a 386 Pfam PF06054 Competence protein CoiA-like family 1 364 3.9E-65 T 12-10-2018 IPR010330 Competence-induced protein CoiA-like BAMF_1226 d441a8ada395df4aeea20a384815793a 386 PIRSF PIRSF007487 1 386 1.2E-83 T 12-10-2018 IPR021176 Competence-induced protein CoiA BAMF_1263 a61f88bf7058af1e805fa52d5378130c 143 SUPERFAMILY SSF55729 3 140 1.1E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_1263 a61f88bf7058af1e805fa52d5378130c 143 Pfam PF13673 Acetyltransferase (GNAT) domain 21 140 7.0E-23 T 12-10-2018 IPR000182 GNAT domain BAMF_1263 a61f88bf7058af1e805fa52d5378130c 143 Gene3D G3DSA:3.40.630.30 2 140 2.6E-46 T 12-10-2018 BAMF_2965 90ec90193f8a531f8eae8f67ddf60dfa 124 Pfam PF03334 Na+/H+ antiporter subunit 12 93 1.0E-25 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 BAMF_2965 90ec90193f8a531f8eae8f67ddf60dfa 124 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 11 108 1.6E-33 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 BAMF_0332 bb9806b13d95e8a88e9f5fa6c81f1cfb 372 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 5 363 1.8E-78 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BAMF_0332 bb9806b13d95e8a88e9f5fa6c81f1cfb 372 Pfam PF03845 Spore germination protein 5 325 3.6E-89 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BAMF_0745 206799770563a48bdcccc7d32d2bf4c6 79 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 78 4.6E-14 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BAMF_0745 206799770563a48bdcccc7d32d2bf4c6 79 Pfam PF00367 phosphotransferase system, EIIB 9 42 3.4E-15 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BAMF_0745 206799770563a48bdcccc7d32d2bf4c6 79 Gene3D G3DSA:3.30.1360.60 1 79 1.9E-26 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BAMF_0745 206799770563a48bdcccc7d32d2bf4c6 79 SUPERFAMILY SSF55604 8 78 8.76E-21 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BAMF_0745 206799770563a48bdcccc7d32d2bf4c6 79 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BAMF_2150 f038dbed6f592f040bb8dee79f939202 111 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 25 104 3.7E-21 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BAMF_2150 f038dbed6f592f040bb8dee79f939202 111 Gene3D G3DSA:1.10.287.1080 1 111 9.4E-38 T 12-10-2018 BAMF_2150 f038dbed6f592f040bb8dee79f939202 111 PIRSF PIRSF029904 1 111 2.7E-55 T 12-10-2018 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD BAMF_2150 f038dbed6f592f040bb8dee79f939202 111 SUPERFAMILY SSF101386 4 104 3.27E-29 T 12-10-2018 BAMF_3233 6bcd1bd871c0b0ff7b13d0d425298c4d 224 SUPERFAMILY SSF161098 18 199 5.76E-36 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3233 6bcd1bd871c0b0ff7b13d0d425298c4d 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 209 1.1E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_3233 6bcd1bd871c0b0ff7b13d0d425298c4d 224 Gene3D G3DSA:1.10.3720.10 13 211 1.2E-33 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3316 6202e57b0a52fb0e7248a42f80664640 193 SMART SM00947 26 182 7.6E-35 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BAMF_3316 6202e57b0a52fb0e7248a42f80664640 193 Pfam PF00484 Carbonic anhydrase 34 177 3.9E-17 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BAMF_3316 6202e57b0a52fb0e7248a42f80664640 193 SUPERFAMILY SSF53056 4 181 6.8E-41 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BAMF_3316 6202e57b0a52fb0e7248a42f80664640 193 Gene3D G3DSA:3.40.1050.10 2 182 4.5E-46 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BAMF_0057 cea3d36a462a6dc1e90ce0171875448f 526 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 354 498 2.1E-23 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BAMF_0057 cea3d36a462a6dc1e90ce0171875448f 526 PIRSF PIRSF038958 7 515 1.9E-79 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type BAMF_0057 cea3d36a462a6dc1e90ce0171875448f 526 Pfam PF01943 Polysaccharide biosynthesis protein 13 303 1.6E-55 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 BAMF_3478 7a74b13095c99db5619fbfb943c093e3 136 Pfam PF14183 YwpF-like protein 2 135 4.6E-45 T 12-10-2018 IPR025573 YwpF-like protein BAMF_3436 501396ffff0ac0a51ceea9767775c210 330 Gene3D G3DSA:3.40.50.2300 61 147 1.5E-21 T 12-10-2018 BAMF_3436 501396ffff0ac0a51ceea9767775c210 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.3E-22 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_3436 501396ffff0ac0a51ceea9767775c210 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 BAMF_3436 501396ffff0ac0a51ceea9767775c210 330 Pfam PF13377 Periplasmic binding protein-like domain 172 323 7.1E-29 T 12-10-2018 BAMF_3436 501396ffff0ac0a51ceea9767775c210 330 SMART SM00354 2 72 3.8E-36 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_3436 501396ffff0ac0a51ceea9767775c210 330 Gene3D G3DSA:3.40.50.2300 149 325 3.4E-42 T 12-10-2018 BAMF_3436 501396ffff0ac0a51ceea9767775c210 330 Gene3D G3DSA:1.10.260.40 4 60 3.9E-24 T 12-10-2018 BAMF_3436 501396ffff0ac0a51ceea9767775c210 330 SUPERFAMILY SSF53822 60 313 2.36E-62 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BAMF_3436 501396ffff0ac0a51ceea9767775c210 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 2.5E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_3436 501396ffff0ac0a51ceea9767775c210 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 2.5E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BAMF_3436 501396ffff0ac0a51ceea9767775c210 330 SUPERFAMILY SSF47413 3 60 4.03E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_3659 d6d17e449f08d99c6925b66e178011d5 53 Pfam PF08671 Anti-repressor SinI 9 35 6.3E-11 T 12-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 BAMF_3659 d6d17e449f08d99c6925b66e178011d5 53 SUPERFAMILY SSF47406 8 35 8.24E-6 T 12-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 BAMF_2111 830e36342cbbe153ac03e79ce40eb8d2 194 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 2 191 7.8E-94 T 12-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 BAMF_2111 830e36342cbbe153ac03e79ce40eb8d2 194 SUPERFAMILY SSF53271 2 189 4.24E-46 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BAMF_2111 830e36342cbbe153ac03e79ce40eb8d2 194 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 42.349 T 12-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 BAMF_2111 830e36342cbbe153ac03e79ce40eb8d2 194 Gene3D G3DSA:3.40.50.2020 3 188 1.1E-56 T 12-10-2018 BAMF_2111 830e36342cbbe153ac03e79ce40eb8d2 194 Pfam PF00156 Phosphoribosyl transferase domain 45 158 2.6E-8 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BAMF_3278 bc5ce51bfd3ebe70a9a5b1861d7994b5 236 Pfam PF02397 Bacterial sugar transferase 38 212 1.6E-60 T 12-10-2018 IPR003362 Bacterial sugar transferase BAMF_0891 895c0707173f6b0d54aa23fdc80032f6 259 SUPERFAMILY SSF52540 95 233 9.0E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0891 895c0707173f6b0d54aa23fdc80032f6 259 Gene3D G3DSA:3.40.50.300 39 249 1.5E-28 T 12-10-2018 BAMF_3872 64167cb6397dbc69bbaaed6194e0f425 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 4.4E-53 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_3872 64167cb6397dbc69bbaaed6194e0f425 149 SUPERFAMILY SSF55658 1 56 8.55E-17 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal BAMF_3872 64167cb6397dbc69bbaaed6194e0f425 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 1.7E-21 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3872 64167cb6397dbc69bbaaed6194e0f425 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3872 64167cb6397dbc69bbaaed6194e0f425 149 SUPERFAMILY SSF55653 56 148 4.45E-29 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BAMF_3872 64167cb6397dbc69bbaaed6194e0f425 149 Gene3D G3DSA:3.40.5.10 1 52 2.5E-23 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_3872 64167cb6397dbc69bbaaed6194e0f425 149 Gene3D G3DSA:3.10.430.100 60 149 2.8E-32 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BAMF_3872 64167cb6397dbc69bbaaed6194e0f425 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 2.9E-30 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal BAMF_3872 64167cb6397dbc69bbaaed6194e0f425 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.536 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0957 6e5d692a554c90fa656f53374264e4f0 421 Pfam PF10651 Domain of unknown function (DUF2479) 4 90 1.5E-19 T 12-10-2018 IPR018913 Domain of unknown function DUF2479 BAMF_0049 bc47bad435befc045fe4086f82c274e4 97 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 94 27.823 T 12-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 BAMF_0049 bc47bad435befc045fe4086f82c274e4 97 SUPERFAMILY SSF160537 2 84 6.15E-33 T 12-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 BAMF_0049 bc47bad435befc045fe4086f82c274e4 97 Pfam PF04026 SpoVG 2 81 3.4E-35 T 12-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 BAMF_0049 bc47bad435befc045fe4086f82c274e4 97 Gene3D G3DSA:3.30.1120.40 1 97 3.0E-40 T 12-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 BAMF_2332 012516e615b249bf1c14a325d152581c 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site BAMF_2332 012516e615b249bf1c14a325d152581c 296 Gene3D G3DSA:1.10.600.10 2 296 2.8E-107 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BAMF_2332 012516e615b249bf1c14a325d152581c 296 Pfam PF00348 Polyprenyl synthetase 31 268 1.0E-59 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 BAMF_2332 012516e615b249bf1c14a325d152581c 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site BAMF_2332 012516e615b249bf1c14a325d152581c 296 SUPERFAMILY SSF48576 8 285 1.08E-83 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BAMF_2651 11d27a209b477e026b776a186d757829 202 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 91 192 3.9E-12 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_2651 11d27a209b477e026b776a186d757829 202 Gene3D G3DSA:1.20.1300.10 2 202 2.6E-47 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_2651 11d27a209b477e026b776a186d757829 202 PIRSF PIRSF000170 1 202 4.2E-104 T 12-10-2018 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute BAMF_2651 11d27a209b477e026b776a186d757829 202 SUPERFAMILY SSF81343 4 201 1.96E-61 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BAMF_2651 11d27a209b477e026b776a186d757829 202 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 5 202 1.1E-67 T 12-10-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit BAMF_2063 b28db3f6375b8dcf995dda21c59437a5 155 Pfam PF02719 Polysaccharide biosynthesis protein 18 140 1.0E-41 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BAMF_2063 b28db3f6375b8dcf995dda21c59437a5 155 SUPERFAMILY SSF51735 15 141 4.18E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2063 b28db3f6375b8dcf995dda21c59437a5 155 Gene3D G3DSA:3.40.50.720 15 140 1.5E-53 T 12-10-2018 BAMF_3626 2b375a475f1d4f201110916773cdd1d2 256 Pfam PF00535 Glycosyl transferase family 2 5 167 2.6E-26 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BAMF_3626 2b375a475f1d4f201110916773cdd1d2 256 Gene3D G3DSA:3.90.550.10 2 256 5.5E-97 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3626 2b375a475f1d4f201110916773cdd1d2 256 SUPERFAMILY SSF53448 2 227 3.84E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0128 3d74d6507aa47f4af21df9faf5de02c4 179 Gene3D G3DSA:3.30.1440.10 1 179 1.9E-84 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0128 3d74d6507aa47f4af21df9faf5de02c4 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.4E-42 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0128 3d74d6507aa47f4af21df9faf5de02c4 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 12-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0128 3d74d6507aa47f4af21df9faf5de02c4 179 PIRSF PIRSF002161 1 179 3.7E-70 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0128 3d74d6507aa47f4af21df9faf5de02c4 179 Pfam PF00281 Ribosomal protein L5 24 80 2.9E-28 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0128 3d74d6507aa47f4af21df9faf5de02c4 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.876 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0128 3d74d6507aa47f4af21df9faf5de02c4 179 SUPERFAMILY SSF55282 3 178 1.74E-79 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_3065 ca6b8563c6e7b70492405031b7b429f2 154 Pfam PF10903 Protein of unknown function (DUF2691) 2 152 6.9E-55 T 12-10-2018 IPR020216 Uncharacterised protein family, YncE BAMF_3065 ca6b8563c6e7b70492405031b7b429f2 154 ProDom PD091678 YNCE 3 153 3.0E-39 T 12-10-2018 IPR020216 Uncharacterised protein family, YncE BAMF_0757 2aff342423541994e54ff741de926745 397 Gene3D G3DSA:1.20.1250.20 1 189 1.2E-24 T 12-10-2018 BAMF_0757 2aff342423541994e54ff741de926745 397 Pfam PF07690 Major Facilitator Superfamily 13 300 2.7E-31 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0757 2aff342423541994e54ff741de926745 397 SUPERFAMILY SSF103473 6 392 9.29E-51 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0757 2aff342423541994e54ff741de926745 397 Gene3D G3DSA:1.20.1250.20 205 395 2.8E-21 T 12-10-2018 BAMF_2241 f19befdc26bd8b9555a25a6b742ca756 146 SMART SM00387 35 140 1.1E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2241 f19befdc26bd8b9555a25a6b742ca756 146 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 1 137 6.0E-79 T 12-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 BAMF_2241 f19befdc26bd8b9555a25a6b742ca756 146 Pfam PF13581 Histidine kinase-like ATPase domain 10 136 1.6E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BAMF_2241 f19befdc26bd8b9555a25a6b742ca756 146 Hamap MF_00637 Anti-sigma F factor [spoIIAB]. 1 140 35.969 T 12-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 BAMF_2241 f19befdc26bd8b9555a25a6b742ca756 146 Gene3D G3DSA:3.30.565.10 1 143 2.8E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_2241 f19befdc26bd8b9555a25a6b742ca756 146 SUPERFAMILY SSF55874 28 135 1.7E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BAMF_3874 aac024ee98f74c9afc221a7f4c4c0e9d 311 Pfam PF09991 Predicted membrane protein (DUF2232) 16 300 3.7E-71 T 12-10-2018 IPR018710 Protein of unknown function DUF2232 BAMF_3438 0aa617ce0ebcb4c5f175a2418ae97f45 131 Pfam PF05025 RbsD / FucU transport protein family 1 130 2.3E-47 T 12-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 BAMF_3438 0aa617ce0ebcb4c5f175a2418ae97f45 131 Gene3D G3DSA:3.40.1650.10 8 127 7.0E-39 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 BAMF_3438 0aa617ce0ebcb4c5f175a2418ae97f45 131 SUPERFAMILY SSF102546 1 131 5.36E-46 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 BAMF_3438 0aa617ce0ebcb4c5f175a2418ae97f45 131 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 131 32.292 T 12-10-2018 IPR023064 D-ribose pyranase GO:0016872 BAMF_2167 d96296284f9c6ae9538ae9366eaf6cf3 250 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 249 31.423 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 BAMF_2167 d96296284f9c6ae9538ae9366eaf6cf3 250 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 42 60 - T 12-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 BAMF_2167 d96296284f9c6ae9538ae9366eaf6cf3 250 Pfam PF00218 Indole-3-glycerol phosphate synthase 6 246 3.2E-85 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 BAMF_2167 d96296284f9c6ae9538ae9366eaf6cf3 250 Gene3D G3DSA:3.20.20.70 1 250 3.2E-86 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_2167 d96296284f9c6ae9538ae9366eaf6cf3 250 SUPERFAMILY SSF51366 17 249 1.29E-75 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BAMF_1326 d642abe1a1150ac3d40fec057f00e584 155 Gene3D G3DSA:1.20.120.450 1 145 4.2E-37 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BAMF_1326 d642abe1a1150ac3d40fec057f00e584 155 SUPERFAMILY SSF109854 1 151 2.75E-33 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BAMF_1326 d642abe1a1150ac3d40fec057f00e584 155 Pfam PF05163 DinB family 4 151 6.2E-31 T 12-10-2018 IPR007837 DNA damage-inducible protein DinB BAMF_3871 dda1d4d74ad6ef494b614d1fc2693f3c 195 SUPERFAMILY SSF56112 23 149 7.96E-16 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BAMF_3871 dda1d4d74ad6ef494b614d1fc2693f3c 195 Gene3D G3DSA:1.10.510.10 2 158 5.4E-10 T 12-10-2018 BAMF_2384 eb2950124359507f3f3ca30806a56916 350 SUPERFAMILY SSF82171 60 330 1.26E-9 T 12-10-2018 BAMF_0979 eaa316f2834612bc54cc02087f563be5 255 Pfam PF00005 ABC transporter 22 158 1.7E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_0979 eaa316f2834612bc54cc02087f563be5 255 Gene3D G3DSA:3.40.50.300 4 249 1.8E-60 T 12-10-2018 BAMF_0979 eaa316f2834612bc54cc02087f563be5 255 SMART SM00382 31 221 2.9E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_0979 eaa316f2834612bc54cc02087f563be5 255 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_0979 eaa316f2834612bc54cc02087f563be5 255 SUPERFAMILY SSF52540 17 235 6.1E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2939 902312bb578e3217c858097ea7e1c460 130 PRINTS PR00681 Ribosomal protein S1 signature 60 78 3.7E-11 T 12-10-2018 BAMF_2939 902312bb578e3217c858097ea7e1c460 130 PRINTS PR00681 Ribosomal protein S1 signature 21 40 3.7E-11 T 12-10-2018 BAMF_2939 902312bb578e3217c858097ea7e1c460 130 Pfam PF00575 S1 RNA binding domain 4 77 1.7E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 BAMF_2939 902312bb578e3217c858097ea7e1c460 130 SMART SM00316 6 77 1.0E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 BAMF_2939 902312bb578e3217c858097ea7e1c460 130 Gene3D G3DSA:2.40.50.140 2 88 2.5E-33 T 12-10-2018 BAMF_2939 902312bb578e3217c858097ea7e1c460 130 SUPERFAMILY SSF50249 5 87 2.33E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_3413 d697082f65f4bf908b7d9a0f4152a3b7 129 TIGRFAM TIGR01518 g3p_cytidyltrns: glycerol-3-phosphate cytidylyltransferase 4 126 3.9E-70 T 12-10-2018 IPR006409 Glycerol-3-phosphate cytidylyltransferase GO:0005737|GO:0019350|GO:0046872|GO:0047348 KEGG: 00564+2.7.7.39|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 BAMF_3413 d697082f65f4bf908b7d9a0f4152a3b7 129 Pfam PF01467 Cytidylyltransferase-like 5 124 2.6E-23 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BAMF_3413 d697082f65f4bf908b7d9a0f4152a3b7 129 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 68 6.8E-22 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BAMF_3413 d697082f65f4bf908b7d9a0f4152a3b7 129 Gene3D G3DSA:3.40.50.620 1 129 3.6E-44 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_3413 d697082f65f4bf908b7d9a0f4152a3b7 129 SUPERFAMILY SSF52374 1 125 1.23E-35 T 12-10-2018 BAMF_3879 4f6d845ba1695a45de94f53558366990 285 SUPERFAMILY SSF103481 195 283 3.53E-10 T 12-10-2018 BAMF_3879 4f6d845ba1695a45de94f53558366990 285 SUPERFAMILY SSF103481 33 138 7.19E-12 T 12-10-2018 BAMF_3879 4f6d845ba1695a45de94f53558366990 285 Pfam PF00892 EamA-like transporter family 148 281 3.8E-23 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BAMF_3879 4f6d845ba1695a45de94f53558366990 285 Pfam PF00892 EamA-like transporter family 1 136 1.0E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BAMF_1718 63cf8f07b55a2273e6145c091b7450a9 166 Pfam PF03975 CheD chemotactic sensory transduction 52 158 2.4E-33 T 12-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 BAMF_1718 63cf8f07b55a2273e6145c091b7450a9 166 Gene3D G3DSA:3.30.1330.200 6 166 6.9E-46 T 12-10-2018 IPR038592 CheD-like superfamily BAMF_1718 63cf8f07b55a2273e6145c091b7450a9 166 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 5 162 26.498 T 12-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 BAMF_1718 63cf8f07b55a2273e6145c091b7450a9 166 SUPERFAMILY SSF64438 8 163 1.83E-44 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic BAMF_3156 04f455a0b8e0c43823ea23c0afaa185b 201 Gene3D G3DSA:1.20.1200.10 24 201 1.0E-66 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BAMF_3156 04f455a0b8e0c43823ea23c0afaa185b 201 Pfam PF01923 Cobalamin adenosyltransferase 16 178 7.7E-59 T 12-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BAMF_3156 04f455a0b8e0c43823ea23c0afaa185b 201 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 16 190 8.6E-68 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BAMF_3156 04f455a0b8e0c43823ea23c0afaa185b 201 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 21 192 2.0E-68 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BAMF_3156 04f455a0b8e0c43823ea23c0afaa185b 201 SUPERFAMILY SSF89028 13 191 3.53E-67 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BAMF_2716 3c8a75d157dabc2cb45a69dcf6dcd211 423 SUPERFAMILY SSF53659 3 422 1.5E-142 T 12-10-2018 BAMF_2716 3c8a75d157dabc2cb45a69dcf6dcd211 423 Gene3D G3DSA:3.40.718.10 1 423 2.6E-185 T 12-10-2018 BAMF_2716 3c8a75d157dabc2cb45a69dcf6dcd211 423 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 2 423 2.1E-228 T 12-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 BAMF_2716 3c8a75d157dabc2cb45a69dcf6dcd211 423 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 307 326 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 BAMF_2716 3c8a75d157dabc2cb45a69dcf6dcd211 423 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 22 417 5.8E-127 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BAMF_2716 3c8a75d157dabc2cb45a69dcf6dcd211 423 SMART SM01329 21 418 2.1E-185 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BAMF_3171 fba2a752824b52326d65abc3af26cd49 355 Pfam PF01032 FecCD transport family 41 350 4.6E-91 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BAMF_3171 fba2a752824b52326d65abc3af26cd49 355 Gene3D G3DSA:1.10.3470.10 26 354 1.1E-93 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_3171 fba2a752824b52326d65abc3af26cd49 355 SUPERFAMILY SSF81345 23 350 1.57E-83 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_3711 fed15f3318b39eb84e08ec69aa1171cc 567 Pfam PF00005 ABC transporter 345 492 1.5E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3711 fed15f3318b39eb84e08ec69aa1171cc 567 Gene3D G3DSA:3.40.50.300 332 566 2.0E-73 T 12-10-2018 BAMF_3711 fed15f3318b39eb84e08ec69aa1171cc 567 ProSitePatterns PS00211 ABC transporters family signature. 464 478 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3711 fed15f3318b39eb84e08ec69aa1171cc 567 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 12 534 1.9E-173 T 12-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 BAMF_3711 fed15f3318b39eb84e08ec69aa1171cc 567 Gene3D G3DSA:1.20.1560.10 5 317 1.2E-41 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_3711 fed15f3318b39eb84e08ec69aa1171cc 567 SUPERFAMILY SSF52540 342 562 7.73E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3711 fed15f3318b39eb84e08ec69aa1171cc 567 SMART SM00382 352 538 2.6E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3711 fed15f3318b39eb84e08ec69aa1171cc 567 SUPERFAMILY SSF90123 7 476 1.31E-49 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BAMF_3711 fed15f3318b39eb84e08ec69aa1171cc 567 Pfam PF00664 ABC transporter transmembrane region 16 276 1.8E-27 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BAMF_0177 08d893e4260b2c4738bda5404084ba60 208 Pfam PF13490 Putative zinc-finger 3 37 8.3E-7 T 12-10-2018 IPR027383 Putative zinc-finger BAMF_0177 08d893e4260b2c4738bda5404084ba60 208 Gene3D G3DSA:1.10.10.1320 7 94 4.6E-6 T 12-10-2018 BAMF_1524 06227a7d2f345b597258f01bdc25b783 275 Pfam PF13772 AIG2-like family 185 254 5.2E-7 T 12-10-2018 BAMF_1524 06227a7d2f345b597258f01bdc25b783 275 SUPERFAMILY SSF110857 2 119 7.98E-19 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily BAMF_1524 06227a7d2f345b597258f01bdc25b783 275 SUPERFAMILY SSF110857 126 252 2.26E-18 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily BAMF_1524 06227a7d2f345b597258f01bdc25b783 275 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 113 1.8E-14 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like BAMF_1524 06227a7d2f345b597258f01bdc25b783 275 Gene3D G3DSA:3.10.490.10 119 275 4.4E-61 T 12-10-2018 BAMF_1524 06227a7d2f345b597258f01bdc25b783 275 Gene3D G3DSA:3.10.490.10 1 116 3.4E-25 T 12-10-2018 BAMF_3616 d4c37658358d2af5f80bbde030620576 153 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 4 149 1.7E-25 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 BAMF_3616 d4c37658358d2af5f80bbde030620576 153 SUPERFAMILY SSF51182 3 150 1.22E-41 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BAMF_3616 d4c37658358d2af5f80bbde030620576 153 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 4 149 1.0E-26 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 BAMF_3616 d4c37658358d2af5f80bbde030620576 153 Gene3D G3DSA:2.60.120.10 1 152 6.4E-56 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_1348 31f16b75867ed457cb974142931f22d5 148 ProDom PD033466 XKDJ PHAGE PHAGE-LIKE PBSX RELATED LIN1276 ELEMENT YQBJ 1 146 8.0E-62 T 12-10-2018 BAMF_1457 3e55e065a2aa29a310459e6a2bf85ad3 61 Pfam PF09953 Uncharacterized protein conserved in bacteria (DUF2187) 2 57 4.1E-29 T 12-10-2018 IPR018690 Protein of unknown function DUF2187 BAMF_0916 d50ab2878671d6c972517ff441d999e8 253 Gene3D G3DSA:2.70.40.10 66 236 2.7E-55 T 12-10-2018 IPR036157 dUTPase-like superfamily BAMF_0916 d50ab2878671d6c972517ff441d999e8 253 Pfam PF00692 dUTPase 194 235 1.5E-5 T 12-10-2018 IPR029054 dUTPase-like BAMF_0916 d50ab2878671d6c972517ff441d999e8 253 Pfam PF00692 dUTPase 78 159 6.4E-14 T 12-10-2018 IPR029054 dUTPase-like BAMF_0916 d50ab2878671d6c972517ff441d999e8 253 SUPERFAMILY SSF51283 68 236 2.07E-38 T 12-10-2018 IPR036157 dUTPase-like superfamily BAMF_2186 5d28228d5e3bb083919e90a77d6cb493 200 PIRSF PIRSF036710 1 200 1.4E-66 T 12-10-2018 IPR014617 Predicted membrane protein, Bacillus YphA type BAMF_1529 e3062835b4caee67c0f84f848ba340f4 257 Gene3D G3DSA:3.40.50.1000 4 246 7.8E-82 T 12-10-2018 IPR023214 HAD superfamily BAMF_1529 e3062835b4caee67c0f84f848ba340f4 257 ProSitePatterns PS01229 Hypothetical cof family signature 2. 204 226 - T 12-10-2018 BAMF_1529 e3062835b4caee67c0f84f848ba340f4 257 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 223 1.9E-23 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BAMF_1529 e3062835b4caee67c0f84f848ba340f4 257 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 249 2.0E-58 T 12-10-2018 BAMF_1529 e3062835b4caee67c0f84f848ba340f4 257 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 247 1.6E-61 T 12-10-2018 IPR000150 Cof family GO:0016787 BAMF_1529 e3062835b4caee67c0f84f848ba340f4 257 Gene3D G3DSA:3.30.1240.10 81 179 7.8E-82 T 12-10-2018 BAMF_1529 e3062835b4caee67c0f84f848ba340f4 257 SUPERFAMILY SSF56784 1 254 4.07E-69 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_2559 354a54f91437bdca7b45ab4b47597b95 216 SUPERFAMILY SSF81901 3 210 2.41E-36 T 12-10-2018 BAMF_2559 354a54f91437bdca7b45ab4b47597b95 216 Pfam PF13432 Tetratricopeptide repeat 106 169 4.0E-5 T 12-10-2018 BAMF_2559 354a54f91437bdca7b45ab4b47597b95 216 Pfam PF14559 Tetratricopeptide repeat 10 67 2.4E-7 T 12-10-2018 BAMF_2559 354a54f91437bdca7b45ab4b47597b95 216 SMART SM00028 34 67 0.082 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2559 354a54f91437bdca7b45ab4b47597b95 216 SMART SM00028 136 169 0.04 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2559 354a54f91437bdca7b45ab4b47597b95 216 SMART SM00028 102 135 0.0033 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2559 354a54f91437bdca7b45ab4b47597b95 216 SMART SM00028 68 101 2.2 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2559 354a54f91437bdca7b45ab4b47597b95 216 SMART SM00028 3 33 15.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2559 354a54f91437bdca7b45ab4b47597b95 216 SMART SM00028 170 203 0.015 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2559 354a54f91437bdca7b45ab4b47597b95 216 Gene3D G3DSA:1.25.40.10 26 216 9.1E-53 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_2559 354a54f91437bdca7b45ab4b47597b95 216 Pfam PF13181 Tetratricopeptide repeat 170 203 9.1E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_2559 354a54f91437bdca7b45ab4b47597b95 216 Pfam PF13181 Tetratricopeptide repeat 68 96 0.093 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_3092 441f91033a7362ff046adfc53c30427c 126 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 9 125 1.3E-27 T 12-10-2018 IPR006524 Transcription activator, ArpU family BAMF_1273 441b0c68669b6cae7937b6a27a161994 153 Gene3D G3DSA:3.40.630.30 2 151 1.0E-23 T 12-10-2018 BAMF_1273 441b0c68669b6cae7937b6a27a161994 153 Pfam PF00583 Acetyltransferase (GNAT) family 28 131 2.5E-15 T 12-10-2018 IPR000182 GNAT domain BAMF_1273 441b0c68669b6cae7937b6a27a161994 153 SUPERFAMILY SSF55729 1 143 4.39E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_3890 647d16e5ab1d25c65e03c0ae83cb1d31 157 Gene3D G3DSA:3.40.630.30 1 145 4.8E-42 T 12-10-2018 BAMF_3890 647d16e5ab1d25c65e03c0ae83cb1d31 157 SUPERFAMILY SSF55729 2 143 1.55E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_3890 647d16e5ab1d25c65e03c0ae83cb1d31 157 Pfam PF13673 Acetyltransferase (GNAT) domain 33 143 6.6E-21 T 12-10-2018 IPR000182 GNAT domain BAMF_2577 92b74837475424c571cdbff258e175c8 518 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 360 500 1.9E-15 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BAMF_2577 92b74837475424c571cdbff258e175c8 518 PIRSF PIRSF038958 1 517 3.6E-194 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type BAMF_2577 92b74837475424c571cdbff258e175c8 518 Pfam PF01943 Polysaccharide biosynthesis protein 6 308 3.6E-69 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 BAMF_2577 92b74837475424c571cdbff258e175c8 518 TIGRFAM TIGR02900 spore_V_B: stage V sporulation protein B 6 494 8.0E-191 T 12-10-2018 IPR014249 Sporulation stage V protein B BAMF_1248 123501cb995dbc53c2687d53109317fd 147 Pfam PF10612 Spore coat protein Z 3 138 1.7E-30 T 12-10-2018 IPR019593 Spore coat protein Z/Y BAMF_2010 c563fc574975eebc275b7ef4438174ac 638 SMART SM00327 442 633 6.3E-19 T 12-10-2018 IPR002035 von Willebrand factor, type A BAMF_2010 c563fc574975eebc275b7ef4438174ac 638 Gene3D G3DSA:3.40.50.410 443 631 7.1E-13 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BAMF_2010 c563fc574975eebc275b7ef4438174ac 638 Pfam PF00092 von Willebrand factor type A domain 447 624 1.0E-8 T 12-10-2018 IPR002035 von Willebrand factor, type A BAMF_2010 c563fc574975eebc275b7ef4438174ac 638 SUPERFAMILY SSF53300 446 631 5.04E-17 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BAMF_0292 4825ec791a538169bbe09d557d11849e 261 Pfam PF10127 Predicted nucleotidyltransferase 1 249 1.6E-90 T 12-10-2018 IPR018775 Nucleotidyltransferase, predicted BAMF_2566 2fd0e270d1c3b2eca90831033c599c4e 424 PIRSF PIRSF001549 1 422 3.6E-120 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 BAMF_2566 2fd0e270d1c3b2eca90831033c599c4e 424 Pfam PF13393 Histidyl-tRNA synthetase 8 313 2.4E-50 T 12-10-2018 BAMF_2566 2fd0e270d1c3b2eca90831033c599c4e 424 Pfam PF03129 Anticodon binding domain 331 420 2.3E-19 T 12-10-2018 IPR004154 Anticodon-binding BAMF_2566 2fd0e270d1c3b2eca90831033c599c4e 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 409 3.8E-159 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 BAMF_2566 2fd0e270d1c3b2eca90831033c599c4e 424 SUPERFAMILY SSF55681 3 317 1.74E-97 T 12-10-2018 BAMF_2566 2fd0e270d1c3b2eca90831033c599c4e 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 420 34.663 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 BAMF_2566 2fd0e270d1c3b2eca90831033c599c4e 424 Gene3D G3DSA:3.30.930.10 2 324 3.3E-116 T 12-10-2018 BAMF_2566 2fd0e270d1c3b2eca90831033c599c4e 424 Gene3D G3DSA:3.40.50.800 329 424 7.4E-28 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily BAMF_2566 2fd0e270d1c3b2eca90831033c599c4e 424 SUPERFAMILY SSF52954 329 419 1.66E-25 T 12-10-2018 BAMF_1188 ac8066737acdf97e06728a4008aa3d5f 102 Pfam PF01883 Iron-sulfur cluster assembly protein 6 80 4.4E-23 T 12-10-2018 IPR002744 MIP18 family-like BAMF_1188 ac8066737acdf97e06728a4008aa3d5f 102 SUPERFAMILY SSF117916 4 100 4.25E-33 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BAMF_1188 ac8066737acdf97e06728a4008aa3d5f 102 Gene3D G3DSA:3.30.300.130 1 102 3.8E-37 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BAMF_2970 71b19e1f884e4fd0709a695ed856b47a 291 SUPERFAMILY SSF48576 41 285 7.44E-36 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BAMF_2970 71b19e1f884e4fd0709a695ed856b47a 291 Gene3D G3DSA:1.10.600.10 3 289 3.5E-35 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BAMF_2970 71b19e1f884e4fd0709a695ed856b47a 291 Pfam PF00348 Polyprenyl synthetase 43 239 3.7E-18 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 BAMF_0683 33d7f2b5a6a9c5482b17acdf3f6b4805 177 Gene3D G3DSA:3.40.630.30 5 177 1.9E-42 T 12-10-2018 BAMF_0683 33d7f2b5a6a9c5482b17acdf3f6b4805 177 Pfam PF00583 Acetyltransferase (GNAT) family 61 159 1.8E-8 T 12-10-2018 IPR000182 GNAT domain BAMF_0683 33d7f2b5a6a9c5482b17acdf3f6b4805 177 SUPERFAMILY SSF55729 14 163 6.67E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_1169 1c82637159319880465b51f61552e6c4 343 SUPERFAMILY SSF51735 3 153 1.1E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1169 1c82637159319880465b51f61552e6c4 343 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 5 332 6.4E-108 T 12-10-2018 IPR030827 Inositol 2-dehydrogenase BAMF_1169 1c82637159319880465b51f61552e6c4 343 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 244 4.0E-13 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 BAMF_1169 1c82637159319880465b51f61552e6c4 343 Gene3D G3DSA:3.30.360.10 126 319 3.3E-104 T 12-10-2018 BAMF_1169 1c82637159319880465b51f61552e6c4 343 SUPERFAMILY SSF55347 130 302 2.13E-29 T 12-10-2018 BAMF_1169 1c82637159319880465b51f61552e6c4 343 Gene3D G3DSA:3.40.50.720 5 306 3.3E-104 T 12-10-2018 BAMF_1169 1c82637159319880465b51f61552e6c4 343 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 125 9.0E-32 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BAMF_3507 aff75398e3cf09789ee2345a491386c7 92 Gene3D G3DSA:1.10.1470.10 38 92 4.3E-9 T 12-10-2018 IPR036629 YjbJ superfamily BAMF_3507 aff75398e3cf09789ee2345a491386c7 92 Pfam PF05532 CsbD-like 39 90 1.4E-14 T 12-10-2018 IPR008462 CsbD-like domain BAMF_3507 aff75398e3cf09789ee2345a491386c7 92 SUPERFAMILY SSF69047 38 91 4.05E-10 T 12-10-2018 IPR036629 YjbJ superfamily BAMF_2438 14b9659fd5d60c2bb9b0636536514cb6 57 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.1E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2438 14b9659fd5d60c2bb9b0636536514cb6 57 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.1E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2438 14b9659fd5d60c2bb9b0636536514cb6 57 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.1E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2438 14b9659fd5d60c2bb9b0636536514cb6 57 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.1E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2438 14b9659fd5d60c2bb9b0636536514cb6 57 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 8.0E-9 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2438 14b9659fd5d60c2bb9b0636536514cb6 57 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 12-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2438 14b9659fd5d60c2bb9b0636536514cb6 57 Gene3D G3DSA:1.20.5.1150 16 56 1.7E-18 T 12-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2438 14b9659fd5d60c2bb9b0636536514cb6 57 Pfam PF01165 Ribosomal protein S21 5 57 2.5E-21 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2438 14b9659fd5d60c2bb9b0636536514cb6 57 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 2.4E-21 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2438 14b9659fd5d60c2bb9b0636536514cb6 57 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.664 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0632 7f6eeb3f3d360038c575b6563c640af1 260 ProDom PD113106 YVBI TRANSMEMBRANE MEMBRANE YEBC YBEC 62 251 2.0E-63 T 12-10-2018 BAMF_0183 321842b0204624d3661073d61f110711 1566 SUPERFAMILY SSF52540 211 373 1.02E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1884 0fcfaf94a7793af6ae2618265725c7f9 48 Hamap MF_00666 Small, acid-soluble spore protein P [sspP]. 1 48 19.711 T 12-10-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 BAMF_1884 0fcfaf94a7793af6ae2618265725c7f9 48 Pfam PF08179 Small acid-soluble spore protein P family 1 43 4.1E-24 T 12-10-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 BAMF_3070 2103fe2a530a9a912ebe5def8abb13d0 140 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 10 135 1.8E-37 T 12-10-2018 IPR006480 Bacteriophage holin family BAMF_3070 2103fe2a530a9a912ebe5def8abb13d0 140 Pfam PF05105 Bacteriophage holin family 18 124 3.3E-28 T 12-10-2018 IPR006480 Bacteriophage holin family BAMF_0070 cccfa46e61ca31543d7f1c1ed4153506 258 Gene3D G3DSA:3.30.420.40 89 257 1.8E-64 T 12-10-2018 BAMF_0070 cccfa46e61ca31543d7f1c1ed4153506 258 SUPERFAMILY SSF53067 2 122 2.73E-40 T 12-10-2018 BAMF_0070 cccfa46e61ca31543d7f1c1ed4153506 258 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 250 9.7E-96 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BAMF_0070 cccfa46e61ca31543d7f1c1ed4153506 258 Gene3D G3DSA:3.30.420.40 1 88 3.1E-34 T 12-10-2018 BAMF_0070 cccfa46e61ca31543d7f1c1ed4153506 258 Pfam PF03309 Type III pantothenate kinase 2 206 1.6E-76 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BAMF_0070 cccfa46e61ca31543d7f1c1ed4153506 258 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 254 38.099 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BAMF_0070 cccfa46e61ca31543d7f1c1ed4153506 258 SUPERFAMILY SSF53067 123 253 9.72E-42 T 12-10-2018 BAMF_3495 fe608685775acfedf7fed37fc4c47323 140 Pfam PF04892 VanZ like family 6 124 1.5E-11 T 12-10-2018 IPR006976 VanZ-like BAMF_0559 5d8fbb19dbc79382e9cf91f6880b6d0a 67 Pfam PF17356 Phage-like element PBSX protein XtrA 3 66 2.5E-21 T 12-10-2018 IPR035530 Phage-like element PBSX protein XtrA BAMF_0559 5d8fbb19dbc79382e9cf91f6880b6d0a 67 ProDom PD027572 XTRA PBSX RELATED YQAO ELEMENT PHAGE PHAGE-LIKE 13 61 5.0E-16 T 12-10-2018 IPR035530 Phage-like element PBSX protein XtrA BAMF_2139 edcf010fd8db5ebab33a287f3a85652a 56 PIRSF PIRSF036698 1 56 1.3E-37 T 12-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA BAMF_2139 edcf010fd8db5ebab33a287f3a85652a 56 Pfam PF14084 Protein of unknown function (DUF4264) 4 56 9.9E-25 T 12-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA BAMF_2120 7a804be138941bd85fb85a40600d996a 79 ProDom PD057197 SPORE COAT CAPSID D INNER D COTD SPORULATION 6 78 2.0E-26 T 12-10-2018 IPR020108 Spore coat protein CotD BAMF_2120 7a804be138941bd85fb85a40600d996a 79 Pfam PF11122 Inner spore coat protein D 14 75 3.9E-15 T 12-10-2018 IPR020108 Spore coat protein CotD BAMF_2548 aa7d851ec356f7af6e3700bdeaed5798 88 Hamap MF_01507 UPF0297 protein . 1 85 28.81 T 12-10-2018 IPR009309 Uncharacterised protein family UPF0297 BAMF_2548 aa7d851ec356f7af6e3700bdeaed5798 88 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 83 1.2E-38 T 12-10-2018 IPR009309 Uncharacterised protein family UPF0297 BAMF_2548 aa7d851ec356f7af6e3700bdeaed5798 88 PIRSF PIRSF037258 1 88 1.3E-46 T 12-10-2018 IPR009309 Uncharacterised protein family UPF0297 BAMF_2100 f6d689a7bb18d55a57976780b293418e 42 TIGRFAM TIGR03093 SASP_sspL: small, acid-soluble spore protein L 6 41 6.1E-21 T 12-10-2018 IPR017526 Small acid-soluble spore protein, SspL BAMF_0533 3d8c72b85d83e6adf110ad67021e5f45 179 Pfam PF01967 MoaC family 24 161 5.5E-52 T 12-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BAMF_0533 3d8c72b85d83e6adf110ad67021e5f45 179 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 13 163 7.5E-66 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BAMF_0533 3d8c72b85d83e6adf110ad67021e5f45 179 SUPERFAMILY SSF55040 20 166 1.1E-55 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BAMF_0533 3d8c72b85d83e6adf110ad67021e5f45 179 Gene3D G3DSA:3.30.70.640 10 171 6.6E-67 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BAMF_0533 3d8c72b85d83e6adf110ad67021e5f45 179 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 11 169 35.106 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BAMF_1545 cbd4d5f5a80e8dfb73a09a159d7f97b9 150 Gene3D G3DSA:3.40.630.30 2 150 5.1E-13 T 12-10-2018 BAMF_1545 cbd4d5f5a80e8dfb73a09a159d7f97b9 150 Pfam PF00583 Acetyltransferase (GNAT) family 32 129 6.1E-7 T 12-10-2018 IPR000182 GNAT domain BAMF_1545 cbd4d5f5a80e8dfb73a09a159d7f97b9 150 SUPERFAMILY SSF55729 2 150 6.31E-14 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_3490 086dc3ae9af2f447923950d234c96058 188 Gene3D G3DSA:3.40.50.850 1 185 4.7E-54 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BAMF_3490 086dc3ae9af2f447923950d234c96058 188 SUPERFAMILY SSF52499 7 186 8.37E-52 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BAMF_3490 086dc3ae9af2f447923950d234c96058 188 Pfam PF00857 Isochorismatase family 12 181 1.5E-42 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 BAMF_3490 086dc3ae9af2f447923950d234c96058 188 PRINTS PR01398 Isochorismatase signature 89 111 3.4E-5 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BAMF_3490 086dc3ae9af2f447923950d234c96058 188 PRINTS PR01398 Isochorismatase signature 163 180 3.4E-5 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BAMF_3490 086dc3ae9af2f447923950d234c96058 188 PRINTS PR01398 Isochorismatase signature 145 163 3.4E-5 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BAMF_3206 93abdfd177f1a881ac9dc8227c23ef57 259 Pfam PF00005 ABC transporter 17 168 1.4E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3206 93abdfd177f1a881ac9dc8227c23ef57 259 Gene3D G3DSA:3.40.50.300 1 246 4.5E-74 T 12-10-2018 BAMF_3206 93abdfd177f1a881ac9dc8227c23ef57 259 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3206 93abdfd177f1a881ac9dc8227c23ef57 259 SUPERFAMILY SSF52540 1 238 1.02E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3206 93abdfd177f1a881ac9dc8227c23ef57 259 PIRSF PIRSF039085 1 244 7.6E-105 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BAMF_3206 93abdfd177f1a881ac9dc8227c23ef57 259 SMART SM00382 26 216 1.4E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3537 b3b0194efc38fadb3d654eb987299cfc 286 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 2 285 4.0E-91 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 BAMF_3537 b3b0194efc38fadb3d654eb987299cfc 286 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BAMF_3537 b3b0194efc38fadb3d654eb987299cfc 286 Pfam PF05175 Methyltransferase small domain 115 219 1.9E-15 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BAMF_3537 b3b0194efc38fadb3d654eb987299cfc 286 Gene3D G3DSA:1.10.8.10 3 84 1.5E-17 T 12-10-2018 BAMF_3537 b3b0194efc38fadb3d654eb987299cfc 286 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 280 1.9E-83 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BAMF_3537 b3b0194efc38fadb3d654eb987299cfc 286 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 284 43.269 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BAMF_3537 b3b0194efc38fadb3d654eb987299cfc 286 SUPERFAMILY SSF53335 3 280 6.54E-49 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_3537 b3b0194efc38fadb3d654eb987299cfc 286 Gene3D G3DSA:3.40.50.150 85 285 1.6E-61 T 12-10-2018 BAMF_1190 89608f2d98daa79e355421d596b4be5b 478 Gene3D G3DSA:3.30.465.10 100 211 3.3E-27 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BAMF_1190 89608f2d98daa79e355421d596b4be5b 478 SUPERFAMILY SSF56176 35 208 1.4E-37 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BAMF_1190 89608f2d98daa79e355421d596b4be5b 478 Pfam PF04030 D-arabinono-1,4-lactone oxidase 342 475 1.8E-4 T 12-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 BAMF_1190 89608f2d98daa79e355421d596b4be5b 478 SUPERFAMILY SSF55103 187 468 6.54E-16 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 BAMF_1190 89608f2d98daa79e355421d596b4be5b 478 Pfam PF01565 FAD binding domain 50 181 1.5E-31 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BAMF_3483 d0913f2cbfea64f9617fc437eb2202b9 265 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 185 260 5.8E-17 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BAMF_3483 d0913f2cbfea64f9617fc437eb2202b9 265 SUPERFAMILY SSF117143 110 223 1.01E-7 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BAMF_3483 d0913f2cbfea64f9617fc437eb2202b9 265 Pfam PF00460 Flagella basal body rod protein 5 35 4.3E-13 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BAMF_3483 d0913f2cbfea64f9617fc437eb2202b9 265 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BAMF_0415 7147b275739222f9584dd1df5fba5855 268 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 9 253 4.0E-59 T 12-10-2018 BAMF_0415 7147b275739222f9584dd1df5fba5855 268 Pfam PF12787 EcsC protein family 9 260 5.6E-77 T 12-10-2018 IPR024787 EcsC protein BAMF_3897 fdb9f3b70bfa7b5f7b6faa4882df2090 443 Pfam PF00083 Sugar (and other) transporter 64 441 4.7E-32 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BAMF_3897 fdb9f3b70bfa7b5f7b6faa4882df2090 443 Gene3D G3DSA:1.20.1250.20 18 443 4.7E-72 T 12-10-2018 BAMF_3897 fdb9f3b70bfa7b5f7b6faa4882df2090 443 SUPERFAMILY SSF103473 11 440 1.57E-76 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3196 ff5a13992605e18fe991e3cc37cf8b9d 223 SUPERFAMILY SSF52833 38 216 4.4E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_3196 ff5a13992605e18fe991e3cc37cf8b9d 223 Gene3D G3DSA:3.40.30.10 28 223 1.1E-57 T 12-10-2018 BAMF_3196 ff5a13992605e18fe991e3cc37cf8b9d 223 Pfam PF13462 Thioredoxin 46 217 5.6E-36 T 12-10-2018 IPR012336 Thioredoxin-like fold BAMF_1925 cec41149d241b4894b16e66ad0b19e50 135 Pfam PF04138 GtrA-like protein 11 124 2.0E-28 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 BAMF_3432 2ae0550d56a48d6c4f79082191dfd5c9 489 PIRSF PIRSF005690 6 482 1.7E-164 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BAMF_3432 2ae0550d56a48d6c4f79082191dfd5c9 489 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 20 467 1.2E-167 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BAMF_0904 67c84ae6da615507bba4695834529812 761 SMART SM00474 118 308 5.0E-22 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BAMF_0904 67c84ae6da615507bba4695834529812 761 Gene3D G3DSA:3.30.420.10 115 332 5.7E-58 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BAMF_0904 67c84ae6da615507bba4695834529812 761 SUPERFAMILY SSF56672 314 747 3.45E-84 T 12-10-2018 BAMF_0904 67c84ae6da615507bba4695834529812 761 SUPERFAMILY SSF53098 115 304 2.7E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BAMF_0904 67c84ae6da615507bba4695834529812 761 Gene3D G3DSA:3.30.70.370 453 745 1.3E-56 T 12-10-2018 BAMF_0904 67c84ae6da615507bba4695834529812 761 Pfam PF00476 DNA polymerase family A 347 747 5.0E-61 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_0904 67c84ae6da615507bba4695834529812 761 Pfam PF01612 3'-5' exonuclease 118 301 3.7E-29 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BAMF_0904 67c84ae6da615507bba4695834529812 761 Gene3D G3DSA:1.10.150.20 502 672 1.3E-56 T 12-10-2018 BAMF_0904 67c84ae6da615507bba4695834529812 761 PRINTS PR00868 DNA-polymerase family A (pol I) signature 694 707 6.1E-15 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_0904 67c84ae6da615507bba4695834529812 761 PRINTS PR00868 DNA-polymerase family A (pol I) signature 591 602 6.1E-15 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_0904 67c84ae6da615507bba4695834529812 761 PRINTS PR00868 DNA-polymerase family A (pol I) signature 554 579 6.1E-15 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_0904 67c84ae6da615507bba4695834529812 761 PRINTS PR00868 DNA-polymerase family A (pol I) signature 665 681 6.1E-15 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_0904 67c84ae6da615507bba4695834529812 761 PRINTS PR00868 DNA-polymerase family A (pol I) signature 445 467 6.1E-15 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_0904 67c84ae6da615507bba4695834529812 761 Gene3D G3DSA:1.20.1060.10 334 448 3.9E-12 T 12-10-2018 BAMF_0904 67c84ae6da615507bba4695834529812 761 SMART SM00482 481 711 9.5E-26 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BAMF_2536 b6f70411d2a5764118c62a80c90275fe 213 SUPERFAMILY SSF53335 7 196 8.22E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_2536 b6f70411d2a5764118c62a80c90275fe 213 Pfam PF13649 Methyltransferase domain 49 137 2.8E-14 T 12-10-2018 BAMF_2536 b6f70411d2a5764118c62a80c90275fe 213 Gene3D G3DSA:3.40.50.150 24 213 3.6E-45 T 12-10-2018 BAMF_2536 b6f70411d2a5764118c62a80c90275fe 213 Hamap MF_02100 Uncharacterized methyltransferase . 2 213 44.229 T 12-10-2018 IPR023553 Uncharacterised methyltransferase, YrrT GO:0008168 BAMF_2391 a318b7f0c89d8e2a1169b71156a37ab5 49 Pfam PF00471 Ribosomal protein L33 3 49 4.3E-22 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2391 a318b7f0c89d8e2a1169b71156a37ab5 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_2391 a318b7f0c89d8e2a1169b71156a37ab5 49 Gene3D G3DSA:2.20.28.120 1 49 1.1E-23 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2391 a318b7f0c89d8e2a1169b71156a37ab5 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 19.083 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2391 a318b7f0c89d8e2a1169b71156a37ab5 49 SUPERFAMILY SSF57829 1 49 1.59E-18 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BAMF_2391 a318b7f0c89d8e2a1169b71156a37ab5 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 2.3E-19 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_0234 e89cc8a8eeb4c4ffabdb5f6e145cec99 112 SUPERFAMILY SSF52833 9 105 1.5E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_0234 e89cc8a8eeb4c4ffabdb5f6e145cec99 112 Gene3D G3DSA:3.40.30.10 4 107 3.6E-22 T 12-10-2018 BAMF_0234 e89cc8a8eeb4c4ffabdb5f6e145cec99 112 Pfam PF00085 Thioredoxin 14 86 3.3E-8 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 BAMF_0346 e17b398f8c492f18bfb3a74768de539f 33 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 7 29 7.1E-11 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BAMF_0346 e17b398f8c492f18bfb3a74768de539f 33 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 7 30 1.2E-12 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BAMF_1624 cb228e9d32a76906942898092e71333b 256 SUPERFAMILY SSF63380 3 99 4.12E-20 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BAMF_1624 cb228e9d32a76906942898092e71333b 256 SUPERFAMILY SSF52343 94 255 2.1E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BAMF_1624 cb228e9d32a76906942898092e71333b 256 Pfam PF00175 Oxidoreductase NAD-binding domain 112 202 1.6E-5 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BAMF_1624 cb228e9d32a76906942898092e71333b 256 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 215 254 1.3E-16 T 12-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain BAMF_1624 cb228e9d32a76906942898092e71333b 256 PIRSF PIRSF006816 1 256 1.4E-70 T 12-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 BAMF_1624 cb228e9d32a76906942898092e71333b 256 Gene3D G3DSA:3.40.50.80 103 214 4.6E-24 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BAMF_1624 cb228e9d32a76906942898092e71333b 256 Gene3D G3DSA:2.40.30.10 1 97 7.1E-27 T 12-10-2018 BAMF_1624 cb228e9d32a76906942898092e71333b 256 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 3 256 38.44 T 12-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit BAMF_1624 cb228e9d32a76906942898092e71333b 256 Gene3D G3DSA:2.10.240.10 215 256 2.1E-19 T 12-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily BAMF_3465 2232cfac97c75a23838cad71a7db5f20 147 Pfam PF16888 Domain of unknown function (DUF5082) 12 102 2.3E-10 T 12-10-2018 IPR031681 Protein of unknown function DUF5082 BAMF_3465 2232cfac97c75a23838cad71a7db5f20 147 ProDom PD085159 YWQH COILED COIL 1 138 7.0E-36 T 12-10-2018 IPR020326 Uncharacterised protein family YwqH BAMF_0014 e065f84aa45f1ba8583163a6e9a100ba 381 PIRSF PIRSF006078 1 378 3.9E-141 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BAMF_0014 e065f84aa45f1ba8583163a6e9a100ba 381 Pfam PF02595 Glycerate kinase family 3 373 1.7E-148 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BAMF_0014 e065f84aa45f1ba8583163a6e9a100ba 381 SUPERFAMILY SSF110738 1 374 2.88E-137 T 12-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 BAMF_0014 e065f84aa45f1ba8583163a6e9a100ba 381 Gene3D G3DSA:3.40.50.10350 1 362 1.5E-142 T 12-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold BAMF_0014 e065f84aa45f1ba8583163a6e9a100ba 381 Gene3D G3DSA:3.90.1510.10 42 276 1.5E-142 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 BAMF_0014 e065f84aa45f1ba8583163a6e9a100ba 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 374 4.0E-156 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BAMF_3515 af9c1ad1c927c35af6dc21ab96e62750 76 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 10 76 3.6E-22 T 12-10-2018 IPR009526 Protein of unknown function DUF1146 BAMF_3515 af9c1ad1c927c35af6dc21ab96e62750 76 Pfam PF06612 Protein of unknown function (DUF1146) 16 63 7.8E-22 T 12-10-2018 IPR009526 Protein of unknown function DUF1146 BAMF_2755 a413b5e9837a31b79f5de6166dffe825 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 7.7E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_2755 a413b5e9837a31b79f5de6166dffe825 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BAMF_2755 a413b5e9837a31b79f5de6166dffe825 207 Gene3D G3DSA:1.10.357.10 2 201 7.5E-37 T 12-10-2018 BAMF_2755 a413b5e9837a31b79f5de6166dffe825 207 SUPERFAMILY SSF46689 4 73 2.15E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_2755 a413b5e9837a31b79f5de6166dffe825 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 4.0E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_2755 a413b5e9837a31b79f5de6166dffe825 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 4.0E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BAMF_1948 64da81b8f17a2e2fc1b71e813aaae827 100 SUPERFAMILY SSF46785 4 97 1.3E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1948 64da81b8f17a2e2fc1b71e813aaae827 100 SMART SM00418 5 98 5.8E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BAMF_1948 64da81b8f17a2e2fc1b71e813aaae827 100 Gene3D G3DSA:1.10.10.10 1 100 1.7E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1948 64da81b8f17a2e2fc1b71e813aaae827 100 Pfam PF12840 Helix-turn-helix domain 5 77 8.7E-12 T 12-10-2018 BAMF_2341 cfb79aaf8f180bc4f810acac1ee5f8f0 245 TIGRFAM TIGR02830 spore_III_AG: stage III sporulation protein AG 44 240 3.2E-71 T 12-10-2018 IPR014195 Sporulation stage III, protein AG BAMF_1696 1e3806137f535cbfb93b8f1d8fd71508 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 4 143 4.7E-37 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BAMF_1696 1e3806137f535cbfb93b8f1d8fd71508 147 Pfam PF02050 Flagellar FliJ protein 19 142 2.2E-18 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BAMF_2404 6c7c04b34cab631f4de173716973fba0 101 Gene3D G3DSA:3.10.350.10 49 96 1.1E-5 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_2404 6c7c04b34cab631f4de173716973fba0 101 ProDom PD067165 YQFZ MEMBRANE WALL BH1402 TRANSMEMBRANE OB1935 CELL 1 99 3.0E-26 T 12-10-2018 IPR020506 Uncharacterised protein family YqfZ BAMF_2404 6c7c04b34cab631f4de173716973fba0 101 SMART SM00257 50 97 1.8E-5 T 12-10-2018 IPR018392 LysM domain BAMF_3155 85a616f9b9a307c763e7ff6e65322e83 422 SUPERFAMILY SSF103473 12 407 1.14E-32 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3155 85a616f9b9a307c763e7ff6e65322e83 422 Gene3D G3DSA:1.20.1250.20 12 203 7.7E-11 T 12-10-2018 BAMF_3155 85a616f9b9a307c763e7ff6e65322e83 422 Gene3D G3DSA:1.20.1250.20 223 411 8.1E-10 T 12-10-2018 BAMF_3155 85a616f9b9a307c763e7ff6e65322e83 422 Pfam PF07690 Major Facilitator Superfamily 50 368 5.8E-20 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_2195 b97b45db7e40348140ac8bec1585af63 218 Pfam PF13367 Protease prsW family 28 198 1.2E-32 T 12-10-2018 IPR026898 Protease PrsW GO:0008233 BAMF_2195 b97b45db7e40348140ac8bec1585af63 218 PIRSF PIRSF016933 1 218 8.2E-87 T 12-10-2018 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 BAMF_1339 fcfaa127ee5d03193b86b2a5f92cfbd3 67 Pfam PF17356 Phage-like element PBSX protein XtrA 4 66 3.2E-21 T 12-10-2018 IPR035530 Phage-like element PBSX protein XtrA BAMF_1339 fcfaa127ee5d03193b86b2a5f92cfbd3 67 ProDom PD027572 XTRA PBSX RELATED YQAO ELEMENT PHAGE PHAGE-LIKE 9 61 2.0E-18 T 12-10-2018 IPR035530 Phage-like element PBSX protein XtrA BAMF_3769 9cbaed1a415dbac5bee5dca860c1d21e 139 Gene3D G3DSA:2.40.128.20 35 130 7.3E-39 T 12-10-2018 IPR012674 Calycin BAMF_3769 9cbaed1a415dbac5bee5dca860c1d21e 139 Pfam PF11631 Protein of unknown function (DUF3255) 18 135 1.5E-47 T 12-10-2018 IPR021664 Protein of unknown function DUF3255 BAMF_3769 9cbaed1a415dbac5bee5dca860c1d21e 139 SUPERFAMILY SSF50814 18 139 2.26E-63 T 12-10-2018 IPR012674 Calycin BAMF_0687 bea6faa5cce8d7859dcd67529c9b45bf 120 Gene3D G3DSA:3.10.180.10 1 119 9.8E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_0687 bea6faa5cce8d7859dcd67529c9b45bf 120 SUPERFAMILY SSF54593 1 118 2.28E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_0687 bea6faa5cce8d7859dcd67529c9b45bf 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 116 1.4E-13 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BAMF_0199 8ce10f81b8a394d75f3ec050c2ab00a8 152 Gene3D G3DSA:2.60.40.2870 23 139 9.7E-42 T 12-10-2018 BAMF_0199 8ce10f81b8a394d75f3ec050c2ab00a8 152 Pfam PF16219 Domain of unknown function (DUF4879) 24 142 4.7E-17 T 12-10-2018 IPR032624 Protein of unknown function DUF4879 BAMF_0282 3a35d758c0a46591a8f15114cb61f184 115 Pfam PF01810 LysE type translocator 7 107 9.7E-23 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BAMF_3491 9aae9c90ae10557cce3155316d5eca39 403 SUPERFAMILY SSF111352 3 380 2.88E-127 T 12-10-2018 BAMF_3491 9aae9c90ae10557cce3155316d5eca39 403 Pfam PF00909 Ammonium Transporter Family 7 400 8.3E-135 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 BAMF_3491 9aae9c90ae10557cce3155316d5eca39 403 PRINTS PR00342 Rhesus blood group protein signature 101 117 1.5E-5 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BAMF_3491 9aae9c90ae10557cce3155316d5eca39 403 PRINTS PR00342 Rhesus blood group protein signature 280 298 1.5E-5 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BAMF_3491 9aae9c90ae10557cce3155316d5eca39 403 PRINTS PR00342 Rhesus blood group protein signature 194 212 1.5E-5 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BAMF_3491 9aae9c90ae10557cce3155316d5eca39 403 PRINTS PR00342 Rhesus blood group protein signature 225 247 1.5E-5 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BAMF_3491 9aae9c90ae10557cce3155316d5eca39 403 TIGRFAM TIGR00836 amt: ammonium transporter 5 400 3.5E-145 T 12-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 BAMF_3491 9aae9c90ae10557cce3155316d5eca39 403 ProSitePatterns PS01219 Ammonium transporters signature. 157 182 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 BAMF_3491 9aae9c90ae10557cce3155316d5eca39 403 Gene3D G3DSA:1.10.3430.10 1 403 3.7E-143 T 12-10-2018 IPR029020 Ammonium/urea transporter BAMF_0407 4016b88e9789c2bbf9647de2d88cab79 357 SUPERFAMILY SSF48452 62 298 9.76E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_0407 4016b88e9789c2bbf9647de2d88cab79 357 SMART SM00028 80 113 59.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0407 4016b88e9789c2bbf9647de2d88cab79 357 SMART SM00028 243 276 0.12 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0407 4016b88e9789c2bbf9647de2d88cab79 357 SMART SM00028 120 153 68.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0407 4016b88e9789c2bbf9647de2d88cab79 357 SMART SM00028 204 237 0.82 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0407 4016b88e9789c2bbf9647de2d88cab79 357 Gene3D G3DSA:1.25.40.10 1 355 4.4E-105 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_0407 4016b88e9789c2bbf9647de2d88cab79 357 Pfam PF13424 Tetratricopeptide repeat 206 274 2.8E-7 T 12-10-2018 BAMF_1694 bbb00551870c1473ed29d848cbaafcd7 251 Pfam PF02108 Flagellar assembly protein FliH 112 237 1.7E-17 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BAMF_1694 bbb00551870c1473ed29d848cbaafcd7 251 TIGRFAM TIGR03825 FliH_bacil: flagellar assembly protein FliH 1 249 1.6E-81 T 12-10-2018 IPR022524 Flagellar assembly FliH, Bacilli BAMF_3660 1538d0647355f8e2a215bedae55cad20 226 SUPERFAMILY SSF53335 6 191 1.6E-38 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_3660 1538d0647355f8e2a215bedae55cad20 226 Gene3D G3DSA:3.40.50.150 18 226 1.1E-57 T 12-10-2018 BAMF_3660 1538d0647355f8e2a215bedae55cad20 226 Pfam PF13489 Methyltransferase domain 9 176 9.2E-20 T 12-10-2018 BAMF_0197 5cf517d9ecc4d39ca9b1b5ff970cc0d3 380 Pfam PF12698 ABC-2 family transporter protein 23 369 3.1E-28 T 12-10-2018 BAMF_1823 f566eb9cbe97d058dfc8333b2a113190 252 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 139 228 1.7E-30 T 12-10-2018 IPR014197 Sporulation protein YunB BAMF_1823 f566eb9cbe97d058dfc8333b2a113190 252 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 14 232 1.1E-70 T 12-10-2018 IPR014197 Sporulation protein YunB BAMF_1823 f566eb9cbe97d058dfc8333b2a113190 252 PIRSF PIRSF021383 1 245 9.4E-106 T 12-10-2018 IPR014197 Sporulation protein YunB BAMF_1878 e29f1a5cd948088239cf61c359551df7 63 Gene3D G3DSA:1.20.58.990 9 59 3.5E-12 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 BAMF_1878 e29f1a5cd948088239cf61c359551df7 63 Pfam PF09388 Spo0E like sporulation regulatory protein 12 53 1.8E-15 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 BAMF_1878 e29f1a5cd948088239cf61c359551df7 63 SUPERFAMILY SSF140500 10 57 2.62E-15 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 BAMF_1246 db1255d5a1021ecf5a0a08c0a8252b12 258 Gene3D G3DSA:3.40.50.720 1 258 2.8E-61 T 12-10-2018 BAMF_1246 db1255d5a1021ecf5a0a08c0a8252b12 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 254 5.8E-88 T 12-10-2018 BAMF_1246 db1255d5a1021ecf5a0a08c0a8252b12 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.6E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1246 db1255d5a1021ecf5a0a08c0a8252b12 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.6E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1246 db1255d5a1021ecf5a0a08c0a8252b12 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.6E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1246 db1255d5a1021ecf5a0a08c0a8252b12 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.6E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1246 db1255d5a1021ecf5a0a08c0a8252b12 258 SUPERFAMILY SSF51735 6 255 8.29E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1246 db1255d5a1021ecf5a0a08c0a8252b12 258 PIRSF PIRSF000094 2 258 3.8E-105 T 12-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BAMF_0918 1c0968efbb3f84c5a901e1d1ead5251d 188 Pfam PF06725 3D domain 123 187 2.0E-12 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 BAMF_0918 1c0968efbb3f84c5a901e1d1ead5251d 188 SUPERFAMILY SSF50685 122 170 2.51E-6 T 12-10-2018 IPR036908 RlpA-like domain superfamily BAMF_0262 f63eb5529c92da8fce6c8c25a481920d 198 Pfam PF02342 TerD domain 1 197 4.0E-74 T 12-10-2018 IPR003325 TerD domain BAMF_0262 f63eb5529c92da8fce6c8c25a481920d 198 Gene3D G3DSA:2.60.60.30 19 191 4.4E-61 T 12-10-2018 BAMF_3551 3e7b49e75721dcc4d348ac3852a6b9de 173 Gene3D G3DSA:3.40.50.10490 1 173 1.2E-54 T 12-10-2018 BAMF_3551 3e7b49e75721dcc4d348ac3852a6b9de 173 Pfam PF10740 Domain of unknown function (DUF2529) 1 169 2.2E-64 T 12-10-2018 IPR019676 Domain of unknown function (DUF2529) BAMF_3551 3e7b49e75721dcc4d348ac3852a6b9de 173 SUPERFAMILY SSF53697 1 163 4.77E-7 T 12-10-2018 BAMF_1571 1fd8d47322800d29a0ca82241b07c880 136 Pfam PF14071 Putative coat protein 12 136 4.3E-45 T 12-10-2018 IPR025953 Putative coat protein YlbD BAMF_2737 ded859920459a29f56dec2a09f4e423b 403 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 117 128 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BAMF_2737 ded859920459a29f56dec2a09f4e423b 403 SUPERFAMILY SSF69864 171 398 3.79E-94 T 12-10-2018 BAMF_2737 ded859920459a29f56dec2a09f4e423b 403 Gene3D G3DSA:3.40.50.620 1 174 6.8E-67 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_2737 ded859920459a29f56dec2a09f4e423b 403 Gene3D G3DSA:3.90.1260.10 175 402 2.5E-92 T 12-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BAMF_2737 ded859920459a29f56dec2a09f4e423b 403 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 397 54.954 T 12-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BAMF_2737 ded859920459a29f56dec2a09f4e423b 403 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BAMF_2737 ded859920459a29f56dec2a09f4e423b 403 Pfam PF00764 Arginosuccinate synthase 8 392 2.5E-184 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BAMF_2737 ded859920459a29f56dec2a09f4e423b 403 SUPERFAMILY SSF52402 3 171 1.1E-48 T 12-10-2018 BAMF_2737 ded859920459a29f56dec2a09f4e423b 403 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 396 8.9E-181 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BAMF_3040 5acd0c7fbb8446055c3443b736d323e8 273 Pfam PF01925 Sulfite exporter TauE/SafE 6 264 2.0E-57 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BAMF_2164 623ec0c8dae67b870c94177bfdd4e4da 265 Gene3D G3DSA:3.20.20.70 3 260 7.0E-90 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_2164 623ec0c8dae67b870c94177bfdd4e4da 265 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 6 258 2.3E-95 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BAMF_2164 623ec0c8dae67b870c94177bfdd4e4da 265 Pfam PF00290 Tryptophan synthase alpha chain 6 243 5.0E-93 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BAMF_2164 623ec0c8dae67b870c94177bfdd4e4da 265 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 40 53 - T 12-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BAMF_2164 623ec0c8dae67b870c94177bfdd4e4da 265 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 6 261 34.588 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BAMF_2164 623ec0c8dae67b870c94177bfdd4e4da 265 SUPERFAMILY SSF51366 6 233 3.86E-78 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BAMF_3687 b7f135a6213862dd2a71fdbb7fb83398 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 12-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 BAMF_3687 b7f135a6213862dd2a71fdbb7fb83398 442 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 3.0E-76 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_3687 b7f135a6213862dd2a71fdbb7fb83398 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 5.6E-55 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_3687 b7f135a6213862dd2a71fdbb7fb83398 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 5.6E-55 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_3687 b7f135a6213862dd2a71fdbb7fb83398 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 5.6E-55 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_3687 b7f135a6213862dd2a71fdbb7fb83398 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 5.6E-55 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_3687 b7f135a6213862dd2a71fdbb7fb83398 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 5.6E-55 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_3687 b7f135a6213862dd2a71fdbb7fb83398 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 5.6E-55 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_3687 b7f135a6213862dd2a71fdbb7fb83398 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 5.6E-55 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BAMF_3687 b7f135a6213862dd2a71fdbb7fb83398 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 9.2E-50 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 BAMF_3687 b7f135a6213862dd2a71fdbb7fb83398 442 SUPERFAMILY SSF56327 173 440 1.3E-97 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BAMF_3687 b7f135a6213862dd2a71fdbb7fb83398 442 Gene3D G3DSA:3.40.50.720 1 170 7.5E-73 T 12-10-2018 BAMF_3687 b7f135a6213862dd2a71fdbb7fb83398 442 Gene3D G3DSA:3.90.110.10 171 442 2.3E-103 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BAMF_3687 b7f135a6213862dd2a71fdbb7fb83398 442 SUPERFAMILY SSF51735 4 170 3.0E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2673 9029b6e6d291473787e3caebf8ccac3e 361 Pfam PF05651 Putative sugar diacid recognition 3 136 3.3E-41 T 12-10-2018 IPR008599 Putative sugar diacid recognition BAMF_2673 9029b6e6d291473787e3caebf8ccac3e 361 Gene3D G3DSA:1.10.10.2840 236 357 3.5E-19 T 12-10-2018 BAMF_2673 9029b6e6d291473787e3caebf8ccac3e 361 Pfam PF13556 PucR C-terminal helix-turn-helix domain 295 352 2.5E-19 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BAMF_2089 1e82b6feca317169e7f658b532aad72d 201 Gene3D G3DSA:1.10.472.50 1 100 5.0E-32 T 12-10-2018 BAMF_2089 1e82b6feca317169e7f658b532aad72d 201 SUPERFAMILY SSF109604 3 196 5.97E-53 T 12-10-2018 BAMF_2089 1e82b6feca317169e7f658b532aad72d 201 Pfam PF01966 HD domain 29 128 3.9E-8 T 12-10-2018 IPR006674 HD domain BAMF_2089 1e82b6feca317169e7f658b532aad72d 201 SMART SM00471 22 138 5.8E-5 T 12-10-2018 IPR003607 HD/PDEase domain BAMF_2089 1e82b6feca317169e7f658b532aad72d 201 Gene3D G3DSA:1.20.58.1910 101 201 7.6E-36 T 12-10-2018 BAMF_1460 50ce112beb2b38761fef026e01238db6 446 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 346 435 2.2E-8 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BAMF_1460 50ce112beb2b38761fef026e01238db6 446 Pfam PF01943 Polysaccharide biosynthesis protein 5 294 1.7E-25 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 BAMF_1460 50ce112beb2b38761fef026e01238db6 446 PIRSF PIRSF038958 1 436 2.7E-74 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type BAMF_2661 cd4762a4be0e69875a65e842cb2d3b83 562 Gene3D G3DSA:3.40.50.12780 10 450 5.6E-125 T 12-10-2018 BAMF_2661 cd4762a4be0e69875a65e842cb2d3b83 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 12-10-2018 IPR020845 AMP-binding, conserved site BAMF_2661 cd4762a4be0e69875a65e842cb2d3b83 562 Pfam PF00501 AMP-binding enzyme 32 458 2.5E-108 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BAMF_2661 cd4762a4be0e69875a65e842cb2d3b83 562 SUPERFAMILY SSF56801 21 552 3.14E-152 T 12-10-2018 BAMF_2661 cd4762a4be0e69875a65e842cb2d3b83 562 Gene3D G3DSA:3.30.300.310 455 558 1.8E-32 T 12-10-2018 BAMF_2661 cd4762a4be0e69875a65e842cb2d3b83 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 468 543 4.2E-21 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BAMF_3059 5fa18de05deb98fc3a5de1da575bd55f 314 ProDom PD031536 MEMBRANE TRANSMEMBRANE YVAX YITN 190 297 1.0E-26 T 12-10-2018 BAMF_3059 5fa18de05deb98fc3a5de1da575bd55f 314 ProDom PD027642 TRANSMEMBRANE MEMBRANE YVAX YITO 89 139 2.0E-11 T 12-10-2018 BAMF_3059 5fa18de05deb98fc3a5de1da575bd55f 314 TIGRFAM TIGR04033 export_SdpB: antimicrobial peptide system protein, SdpB family 13 284 7.4E-69 T 12-10-2018 IPR023894 Sporulation delaying protein SdpB BAMF_3059 5fa18de05deb98fc3a5de1da575bd55f 314 SMART SM00752 15 286 6.9E-43 T 12-10-2018 IPR011020 HTTM Reactome: R-HSA-159740 BAMF_0567 351b7d220270caf6c49eb8af51d6c650 137 SUPERFAMILY SSF159006 1 136 5.76E-12 T 12-10-2018 BAMF_0567 351b7d220270caf6c49eb8af51d6c650 137 Gene3D G3DSA:2.10.70.50 1 50 4.5E-24 T 12-10-2018 BAMF_0567 351b7d220270caf6c49eb8af51d6c650 137 Pfam PF09643 YopX protein 5 134 6.2E-11 T 12-10-2018 IPR019096 YopX protein BAMF_0567 351b7d220270caf6c49eb8af51d6c650 137 Gene3D G3DSA:2.30.30.290 60 137 1.3E-6 T 12-10-2018 IPR023385 YopX-like, C-terminal BAMF_1882 fd98bd7c19d5e9dd87076d64a0292ebb 142 Pfam PF11084 Protein of unknown function (DUF2621) 3 141 5.0E-73 T 12-10-2018 IPR020203 Uncharacterised protein family, YneK BAMF_1882 fd98bd7c19d5e9dd87076d64a0292ebb 142 ProDom PD086666 YNEK BH2332 11 141 9.0E-57 T 12-10-2018 IPR020203 Uncharacterised protein family, YneK BAMF_3379 5d8538fce5c69949189b59a5902c12d0 143 SUPERFAMILY SSF141457 1 138 3.79E-49 T 12-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily BAMF_3379 5d8538fce5c69949189b59a5902c12d0 143 Pfam PF02623 FliW protein 19 137 2.4E-39 T 12-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 BAMF_3379 5d8538fce5c69949189b59a5902c12d0 143 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 141 24.913 T 12-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 BAMF_3379 5d8538fce5c69949189b59a5902c12d0 143 Gene3D G3DSA:2.30.290.10 1 141 9.8E-53 T 12-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily BAMF_1371 527c0a5ce5e09c4e61016c64a6cf9650 248 Gene3D G3DSA:3.30.70.2720 128 248 8.5E-44 T 12-10-2018 BAMF_1371 527c0a5ce5e09c4e61016c64a6cf9650 248 ProDom PD120066 SPORULATION STAGE SA II SPOIISA TRANSMEMBRANE MEMBRANE KILLER 1 247 5.0E-115 T 12-10-2018 BAMF_1371 527c0a5ce5e09c4e61016c64a6cf9650 248 Gene3D G3DSA:1.20.5.460 92 127 7.1E-21 T 12-10-2018 BAMF_1371 527c0a5ce5e09c4e61016c64a6cf9650 248 Pfam PF14171 Toxin SpoIISA, type II toxin-antitoxin system 3 239 3.4E-89 T 12-10-2018 IPR025940 Toxin SpoIISA, type II toxin-antitoxin system GO:0009405|GO:0016021 BAMF_0158 b3775bae8d66f4876c020eedf52795e1 404 Gene3D G3DSA:1.20.1250.20 4 183 5.3E-19 T 12-10-2018 BAMF_0158 b3775bae8d66f4876c020eedf52795e1 404 Gene3D G3DSA:1.20.1250.20 209 385 1.0E-26 T 12-10-2018 BAMF_0158 b3775bae8d66f4876c020eedf52795e1 404 Pfam PF07690 Major Facilitator Superfamily 12 173 5.5E-17 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0158 b3775bae8d66f4876c020eedf52795e1 404 Pfam PF07690 Major Facilitator Superfamily 214 387 1.2E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0158 b3775bae8d66f4876c020eedf52795e1 404 SUPERFAMILY SSF103473 3 384 1.96E-45 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_1147 b10ebd94728e9ad5e9cc72e98924f963 237 Gene3D G3DSA:3.30.240.20 81 154 5.8E-22 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_1147 b10ebd94728e9ad5e9cc72e98924f963 237 Gene3D G3DSA:3.30.240.20 171 230 1.7E-14 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BAMF_1147 b10ebd94728e9ad5e9cc72e98924f963 237 Pfam PF04239 Protein of unknown function (DUF421) 90 207 3.4E-34 T 12-10-2018 IPR007353 Protein of unknown function DUF421 BAMF_2831 e7e6eaca4b7222c9dbe5434232eccf82 322 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 15 314 5.0E-143 T 12-10-2018 IPR005911 Protein YhcC-like GO:0051536 BAMF_2831 e7e6eaca4b7222c9dbe5434232eccf82 322 SMART SM00729 32 259 1.8E-45 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BAMF_2831 e7e6eaca4b7222c9dbe5434232eccf82 322 SUPERFAMILY SSF102114 6 309 3.92E-54 T 12-10-2018 BAMF_2831 e7e6eaca4b7222c9dbe5434232eccf82 322 Gene3D G3DSA:3.80.30.20 50 258 1.4E-14 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BAMF_2831 e7e6eaca4b7222c9dbe5434232eccf82 322 Pfam PF04055 Radical SAM superfamily 52 214 2.8E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BAMF_2831 e7e6eaca4b7222c9dbe5434232eccf82 322 Pfam PF16199 Radical_SAM C-terminal domain 220 303 3.1E-26 T 12-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 BAMF_2835 f1fd35f0f1eb689d0fd3433d94598e57 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 121 1.5E-8 T 12-10-2018 IPR001451 Hexapeptide repeat BAMF_2835 f1fd35f0f1eb689d0fd3433d94598e57 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 45 3.2E-5 T 12-10-2018 IPR001451 Hexapeptide repeat BAMF_2835 f1fd35f0f1eb689d0fd3433d94598e57 172 SUPERFAMILY SSF51161 3 169 3.47E-49 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily BAMF_2835 f1fd35f0f1eb689d0fd3433d94598e57 172 Gene3D G3DSA:2.160.10.10 1 172 1.2E-72 T 12-10-2018 BAMF_0696 8945bc46d2b06d4d6f974472de67d299 642 PIRSF PIRSF005091 1 620 1.1E-196 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like BAMF_0696 8945bc46d2b06d4d6f974472de67d299 642 Gene3D G3DSA:3.40.720.10 236 546 6.3E-80 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BAMF_0696 8945bc46d2b06d4d6f974472de67d299 642 Pfam PF00884 Sulfatase 244 535 9.2E-36 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BAMF_0696 8945bc46d2b06d4d6f974472de67d299 642 SUPERFAMILY SSF53649 242 636 1.57E-79 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BAMF_1452 bd6df865ff9f8250d4b5b72358302c7b 219 Gene3D G3DSA:3.40.50.620 1 219 5.3E-78 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BAMF_1452 bd6df865ff9f8250d4b5b72358302c7b 219 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 204 6.5E-89 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BAMF_1452 bd6df865ff9f8250d4b5b72358302c7b 219 Pfam PF06508 Queuosine biosynthesis protein QueC 5 211 3.8E-87 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BAMF_1452 bd6df865ff9f8250d4b5b72358302c7b 219 SUPERFAMILY SSF52402 3 211 2.65E-66 T 12-10-2018 BAMF_1452 bd6df865ff9f8250d4b5b72358302c7b 219 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 216 50.648 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BAMF_1452 bd6df865ff9f8250d4b5b72358302c7b 219 PIRSF PIRSF006293 2 217 3.8E-79 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BAMF_1377 d04d3fe548581e1f29d1a145e4bf9eb2 323 SUPERFAMILY SSF53448 6 180 2.72E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_1377 d04d3fe548581e1f29d1a145e4bf9eb2 323 Gene3D G3DSA:3.90.550.10 2 202 2.5E-36 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_1377 d04d3fe548581e1f29d1a145e4bf9eb2 323 Pfam PF00535 Glycosyl transferase family 2 8 170 2.2E-35 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BAMF_1914 f27a59cfdfac5402c857cb39bc4c27f8 413 Pfam PF00698 Acyl transferase domain 19 299 1.6E-34 T 12-10-2018 IPR014043 Acyl transferase BAMF_1914 f27a59cfdfac5402c857cb39bc4c27f8 413 SUPERFAMILY SSF52151 17 318 7.59E-71 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BAMF_1914 f27a59cfdfac5402c857cb39bc4c27f8 413 Gene3D G3DSA:3.30.70.250 141 210 2.1E-90 T 12-10-2018 BAMF_1914 f27a59cfdfac5402c857cb39bc4c27f8 413 SUPERFAMILY SSF55048 142 210 1.31E-12 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BAMF_1914 f27a59cfdfac5402c857cb39bc4c27f8 413 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 20 350 6.0E-38 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain BAMF_1914 f27a59cfdfac5402c857cb39bc4c27f8 413 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 17 303 2.4E-95 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BAMF_1914 f27a59cfdfac5402c857cb39bc4c27f8 413 Gene3D G3DSA:3.40.366.10 18 299 2.1E-90 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 BAMF_1619 f5ac45961ffcb7cef634706339bf351c 436 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 340 360 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BAMF_1619 f5ac45961ffcb7cef634706339bf351c 436 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 16 418 1.7E-137 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BAMF_1619 f5ac45961ffcb7cef634706339bf351c 436 Pfam PF00860 Permease family 18 393 7.2E-118 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BAMF_2686 8bc51364231fc78b52989ac12734fdbd 321 PIRSF PIRSF026534 3 321 7.9E-102 T 12-10-2018 IPR016840 Glycoside hydrolase, family 43, endo-1, 5-alpha-L-arabinosidase GO:0046558 BAMF_2686 8bc51364231fc78b52989ac12734fdbd 321 SUPERFAMILY SSF75005 35 319 4.23E-67 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BAMF_2686 8bc51364231fc78b52989ac12734fdbd 321 Pfam PF04616 Glycosyl hydrolases family 43 39 319 3.5E-47 T 12-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 BAMF_2686 8bc51364231fc78b52989ac12734fdbd 321 Gene3D G3DSA:2.115.10.20 29 321 7.7E-93 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BAMF_0205 11e5a02172cce4bd2384f1654bf720df 444 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 6.3E-257 T 12-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 BAMF_0205 11e5a02172cce4bd2384f1654bf720df 444 PIRSF PIRSF002808 5 444 7.3E-176 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 BAMF_0205 11e5a02172cce4bd2384f1654bf720df 444 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 2.9E-168 T 12-10-2018 BAMF_0205 11e5a02172cce4bd2384f1654bf720df 444 Gene3D G3DSA:1.20.1250.20 240 443 1.7E-57 T 12-10-2018 BAMF_0205 11e5a02172cce4bd2384f1654bf720df 444 Gene3D G3DSA:1.20.1250.20 19 226 4.0E-56 T 12-10-2018 BAMF_0205 11e5a02172cce4bd2384f1654bf720df 444 Pfam PF07690 Major Facilitator Superfamily 34 399 7.8E-52 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0205 11e5a02172cce4bd2384f1654bf720df 444 SUPERFAMILY SSF103473 9 436 5.62E-82 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0205 11e5a02172cce4bd2384f1654bf720df 444 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 BAMF_2836 56a8d611557919b84f2ba1fd81f50532 467 Pfam PF00324 Amino acid permease 16 445 2.3E-120 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BAMF_2836 56a8d611557919b84f2ba1fd81f50532 467 PIRSF PIRSF006060 1 467 1.2E-72 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_2836 56a8d611557919b84f2ba1fd81f50532 467 Gene3D G3DSA:1.20.1740.10 9 462 9.4E-65 T 12-10-2018 BAMF_2836 56a8d611557919b84f2ba1fd81f50532 467 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BAMF_0460 8f948aeebf430c6d687a525d00c7dadd 226 Gene3D G3DSA:3.40.50.1860 2 216 2.3E-52 T 12-10-2018 BAMF_0460 8f948aeebf430c6d687a525d00c7dadd 226 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 217 2.4E-38 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_0460 8f948aeebf430c6d687a525d00c7dadd 226 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 220 1.7E-35 T 12-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 BAMF_0460 8f948aeebf430c6d687a525d00c7dadd 226 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 87 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_0460 8f948aeebf430c6d687a525d00c7dadd 226 SUPERFAMILY SSF53681 116 221 1.19E-19 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_0460 8f948aeebf430c6d687a525d00c7dadd 226 SUPERFAMILY SSF53681 1 113 3.92E-27 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BAMF_0460 8f948aeebf430c6d687a525d00c7dadd 226 Gene3D G3DSA:3.40.50.1860 105 209 2.3E-52 T 12-10-2018 BAMF_2393 17044bc4204a81482b2d60386bb050de 154 Pfam PF02618 YceG-like family 93 153 1.1E-6 T 12-10-2018 IPR003770 Endolytic murein transglycosylase BAMF_2393 17044bc4204a81482b2d60386bb050de 154 Gene3D G3DSA:1.10.8.1150 86 154 3.1E-12 T 12-10-2018 BAMF_1218 7f92c7ffc1c1bd5133c08def1dafe71b 305 Gene3D G3DSA:1.10.3720.10 94 305 3.2E-22 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1218 7f92c7ffc1c1bd5133c08def1dafe71b 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 74 1.6E-17 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BAMF_1218 7f92c7ffc1c1bd5133c08def1dafe71b 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 305 2.0E-31 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_1218 7f92c7ffc1c1bd5133c08def1dafe71b 305 SUPERFAMILY SSF161098 99 304 2.62E-26 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_0821 d908a6b1ffa3a11d94ee69c350de0c6a 57 SUPERFAMILY SSF53474 1 50 7.54E-10 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_0821 d908a6b1ffa3a11d94ee69c350de0c6a 57 Gene3D G3DSA:3.40.50.1820 1 54 2.5E-9 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2317 033b23b05efdcc0e1d5197d65150a7de 208 SMART SM00646 91 202 4.5E-44 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BAMF_2317 033b23b05efdcc0e1d5197d65150a7de 208 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 33 202 6.3E-53 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BAMF_2317 033b23b05efdcc0e1d5197d65150a7de 208 SUPERFAMILY SSF53187 30 205 1.35E-52 T 12-10-2018 BAMF_2317 033b23b05efdcc0e1d5197d65150a7de 208 Gene3D G3DSA:3.40.630.40 29 208 3.1E-61 T 12-10-2018 BAMF_1480 fcf188d5e88216bbca7014e20e2c1c1c 430 Gene3D G3DSA:1.20.1250.20 2 404 2.9E-36 T 12-10-2018 BAMF_1480 fcf188d5e88216bbca7014e20e2c1c1c 430 TIGRFAM TIGR00900 2A0121: H+ Antiporter protein 9 377 1.1E-119 T 12-10-2018 IPR004751 Drug antiporter protein GO:0015307|GO:0015893 BAMF_1480 fcf188d5e88216bbca7014e20e2c1c1c 430 Pfam PF07690 Major Facilitator Superfamily 12 356 2.8E-24 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_1480 fcf188d5e88216bbca7014e20e2c1c1c 430 SUPERFAMILY SSF103473 5 407 3.27E-39 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_2954 f3021b0dbe9326269f54f0e715c4cc1b 357 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 38 347 1.9E-97 T 12-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 BAMF_2954 f3021b0dbe9326269f54f0e715c4cc1b 357 Gene3D G3DSA:3.40.50.2300 144 341 5.9E-107 T 12-10-2018 BAMF_2954 f3021b0dbe9326269f54f0e715c4cc1b 357 SUPERFAMILY SSF53822 50 301 2.28E-11 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BAMF_2954 f3021b0dbe9326269f54f0e715c4cc1b 357 Gene3D G3DSA:3.40.50.2300 40 310 5.9E-107 T 12-10-2018 BAMF_1610 802f1903db6369e1ec348b56137a2b39 152 Pfam PF04472 Cell division protein SepF 65 136 3.5E-31 T 12-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 BAMF_1610 802f1903db6369e1ec348b56137a2b39 152 Hamap MF_01197 Cell division protein SepF [sepF]. 1 144 21.551 T 12-10-2018 IPR023052 Cell division protein SepF GO:0090529 BAMF_1610 802f1903db6369e1ec348b56137a2b39 152 Gene3D G3DSA:3.30.110.150 58 152 5.2E-38 T 12-10-2018 IPR038594 SepF-like superfamily BAMF_3541 4656a554a4863d5ebc1a986aa423b4c1 318 Pfam PF03547 Membrane transport protein 7 163 3.1E-28 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 BAMF_3541 4656a554a4863d5ebc1a986aa423b4c1 318 Pfam PF03547 Membrane transport protein 165 314 9.5E-25 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 BAMF_0710 2791312ce48f992c4cccde86f39f809e 394 PRINTS PR01035 Tetracycline resistance protein signature 141 163 2.3E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_0710 2791312ce48f992c4cccde86f39f809e 394 PRINTS PR01035 Tetracycline resistance protein signature 169 189 2.3E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_0710 2791312ce48f992c4cccde86f39f809e 394 PRINTS PR01035 Tetracycline resistance protein signature 27 43 2.3E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_0710 2791312ce48f992c4cccde86f39f809e 394 SUPERFAMILY SSF103473 14 390 5.23E-54 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0710 2791312ce48f992c4cccde86f39f809e 394 Gene3D G3DSA:1.20.1250.20 12 384 9.5E-51 T 12-10-2018 BAMF_0710 2791312ce48f992c4cccde86f39f809e 394 Pfam PF07690 Major Facilitator Superfamily 22 238 4.3E-26 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0710 2791312ce48f992c4cccde86f39f809e 394 Pfam PF07690 Major Facilitator Superfamily 241 384 1.1E-9 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_3708 7917d8e7589d34a890cbad7d3b90d775 452 Gene3D G3DSA:1.10.4160.10 5 447 2.5E-44 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily BAMF_3708 7917d8e7589d34a890cbad7d3b90d775 452 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 428 9.9E-107 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 BAMF_3708 7917d8e7589d34a890cbad7d3b90d775 452 PIRSF PIRSF002744 1 451 7.6E-141 T 12-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 BAMF_2818 b6c43f84f64aaeba8689252e16064c5c 205 TIGRFAM TIGR02206 intg_mem_TP0381: conserved hypothetical integral membrane protein TIGR02206 3 198 7.0E-59 T 12-10-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 BAMF_2818 b6c43f84f64aaeba8689252e16064c5c 205 Pfam PF09529 Integral membrane protein (intg_mem_TP0381) 5 195 8.4E-50 T 12-10-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 BAMF_0584 c840025e4876f5c6c0ad7fe67914e130 63 Pfam PF07498 Rho termination factor, N-terminal domain 31 61 6.8E-6 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 BAMF_3663 6182d990bb6498a468369c1a838d5f9d 418 Pfam PF04261 Dyp-type peroxidase family 68 406 9.3E-114 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 BAMF_3663 6182d990bb6498a468369c1a838d5f9d 418 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 68 406 1.8E-99 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 BAMF_3663 6182d990bb6498a468369c1a838d5f9d 418 SUPERFAMILY SSF54909 63 410 4.11E-84 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BAMF_3663 6182d990bb6498a468369c1a838d5f9d 418 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 11 34 1.7E-7 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BAMF_3663 6182d990bb6498a468369c1a838d5f9d 418 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 5 417 2.7E-176 T 12-10-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 BAMF_0634 86e30e83ce1d36c08a22d31fac2c4301 184 Hamap MF_01515 UPF0316 protein . 10 178 30.469 T 12-10-2018 IPR022930 Protein of unknown function UPF0316 BAMF_0634 86e30e83ce1d36c08a22d31fac2c4301 184 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 118 170 5.5E-6 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 BAMF_2421 ec1c9ba5bf9e396ba627a393e7937559 270 Pfam PF03618 Kinase/pyrophosphorylase 6 262 5.0E-96 T 12-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 BAMF_2421 ec1c9ba5bf9e396ba627a393e7937559 270 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 268 60.475 T 12-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein BAMF_1733 f4f72b0034a1dceb2a5293a49ea68b64 91 Gene3D G3DSA:3.30.1230.10 1 91 9.5E-36 T 12-10-2018 IPR035931 YlxR-like superfamily BAMF_1733 f4f72b0034a1dceb2a5293a49ea68b64 91 SUPERFAMILY SSF64376 5 88 5.62E-28 T 12-10-2018 IPR035931 YlxR-like superfamily BAMF_1733 f4f72b0034a1dceb2a5293a49ea68b64 91 Pfam PF04296 Protein of unknown function (DUF448) 10 82 2.6E-28 T 12-10-2018 IPR007393 Domain of unknown function DUF448 BAMF_1055 7497dc91db65eb635d9a6735f817c4d6 238 Gene3D G3DSA:3.20.20.190 1 237 2.3E-78 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BAMF_1055 7497dc91db65eb635d9a6735f817c4d6 238 SUPERFAMILY SSF51695 3 234 6.28E-73 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BAMF_1055 7497dc91db65eb635d9a6735f817c4d6 238 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 232 2.0E-47 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BAMF_2083 a3b877b192a43209725db89bcfd59a69 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 4.4E-51 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BAMF_2083 a3b877b192a43209725db89bcfd59a69 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 4.4E-51 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BAMF_2083 a3b877b192a43209725db89bcfd59a69 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 4.4E-51 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BAMF_2083 a3b877b192a43209725db89bcfd59a69 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 4.4E-51 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BAMF_2083 a3b877b192a43209725db89bcfd59a69 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 4.4E-51 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BAMF_2083 a3b877b192a43209725db89bcfd59a69 264 Gene3D G3DSA:3.30.572.10 1 264 1.1E-133 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BAMF_2083 a3b877b192a43209725db89bcfd59a69 264 SUPERFAMILY SSF55831 1 264 2.49E-131 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BAMF_2083 a3b877b192a43209725db89bcfd59a69 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 3.1E-97 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BAMF_2083 a3b877b192a43209725db89bcfd59a69 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 2.5E-43 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BAMF_2083 a3b877b192a43209725db89bcfd59a69 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.431 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BAMF_2083 a3b877b192a43209725db89bcfd59a69 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 12-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BAMF_2083 a3b877b192a43209725db89bcfd59a69 264 Pfam PF00303 Thymidylate synthase 2 264 2.1E-128 T 12-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BAMF_1702 d795c7187b26c14690c298194e2c97bc 139 Pfam PF03748 Flagellar basal body-associated protein FliL 47 139 2.8E-18 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 BAMF_0548 d9d41c7a4483313aca8dd4666637cd8e 65 Gene3D G3DSA:3.30.40.30 2 65 3.2E-30 T 12-10-2018 IPR023118 YqaI domain superfamily BAMF_0548 d9d41c7a4483313aca8dd4666637cd8e 65 SUPERFAMILY SSF160713 2 64 3.66E-20 T 12-10-2018 IPR023118 YqaI domain superfamily BAMF_0548 d9d41c7a4483313aca8dd4666637cd8e 65 Pfam PF09466 Hypothetical protein Yqai 3 65 5.1E-21 T 12-10-2018 IPR018474 Uncharacterised protein family YqaI BAMF_2221 7f004d3b0ccca8e6f13289ba802f85cf 251 Gene3D G3DSA:1.10.10.580 181 244 1.2E-5 T 12-10-2018 IPR023093 ScpA-like, C-terminal BAMF_2221 7f004d3b0ccca8e6f13289ba802f85cf 251 Hamap MF_01805 Segregation and condensation protein A [scpA]. 4 246 27.954 T 12-10-2018 IPR003768 Segregation and condensation protein A BAMF_2221 7f004d3b0ccca8e6f13289ba802f85cf 251 Pfam PF02616 Segregation and condensation protein ScpA 21 244 2.8E-79 T 12-10-2018 IPR003768 Segregation and condensation protein A BAMF_0841 bc011283f6f5275ef62287612b46bba1 138 Gene3D G3DSA:3.30.160.250 1 97 6.0E-25 T 12-10-2018 BAMF_0841 bc011283f6f5275ef62287612b46bba1 138 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 7 110 4.5E-17 T 12-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system BAMF_0841 bc011283f6f5275ef62287612b46bba1 138 SUPERFAMILY SSF143100 3 69 7.85E-19 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like BAMF_3189 3dca9160291f4d6757ac8fc357bd51cc 671 Pfam PF00999 Sodium/hydrogen exchanger family 5 413 5.2E-65 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BAMF_3189 3dca9160291f4d6757ac8fc357bd51cc 671 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 12 525 6.8E-102 T 12-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 BAMF_2820 ef9d8e95fd3595f53814754524679f10 251 Gene3D G3DSA:3.40.50.300 1 243 7.0E-65 T 12-10-2018 BAMF_2820 ef9d8e95fd3595f53814754524679f10 251 Pfam PF00005 ABC transporter 23 171 9.5E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_2820 ef9d8e95fd3595f53814754524679f10 251 SMART SM00382 32 220 4.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_2820 ef9d8e95fd3595f53814754524679f10 251 SUPERFAMILY SSF52540 3 224 7.34E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3693 435526c9c845ed29bac1ca4cf121c569 196 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 10 195 33.37 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BAMF_3693 435526c9c845ed29bac1ca4cf121c569 196 SUPERFAMILY SSF50486 6 196 2.2E-62 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 BAMF_3693 435526c9c845ed29bac1ca4cf121c569 196 Gene3D G3DSA:3.10.300.10 3 196 5.7E-62 T 12-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BAMF_3693 435526c9c845ed29bac1ca4cf121c569 196 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 11 192 1.3E-57 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BAMF_3693 435526c9c845ed29bac1ca4cf121c569 196 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 8 195 1.0E-75 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BAMF_1201 247bc0c5fcaeb90e871e8bc5a062805c 244 SUPERFAMILY SSF53474 40 241 1.67E-12 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1201 247bc0c5fcaeb90e871e8bc5a062805c 244 Gene3D G3DSA:3.40.50.1820 28 240 1.7E-8 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1099 8bf0bcbf20eac9f97408c02fa3c69aaf 408 PIRSF PIRSF037259 2 407 5.5E-135 T 12-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 BAMF_1099 8bf0bcbf20eac9f97408c02fa3c69aaf 408 Pfam PF05975 Bacterial ABC transporter protein EcsB 6 385 1.4E-121 T 12-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 BAMF_1072 5d4594405fa237ca85cf980be8661d47 126 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 16 118 5.8E-25 T 12-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA BAMF_1072 5d4594405fa237ca85cf980be8661d47 126 SUPERFAMILY SSF158622 13 124 1.7E-38 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily BAMF_1072 5d4594405fa237ca85cf980be8661d47 126 Hamap MF_01526 UPF0342 protein . 12 123 19.149 T 12-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA BAMF_1072 5d4594405fa237ca85cf980be8661d47 126 Gene3D G3DSA:1.20.1500.10 12 123 3.2E-38 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily BAMF_1128 96b8492f18269680122e5a83ce390882 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 228 4.2E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1128 96b8492f18269680122e5a83ce390882 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 180 4.2E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1128 96b8492f18269680122e5a83ce390882 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 245 265 4.2E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1128 96b8492f18269680122e5a83ce390882 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 43 60 4.2E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1128 96b8492f18269680122e5a83ce390882 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 129 4.2E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1128 96b8492f18269680122e5a83ce390882 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 209 4.2E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1128 96b8492f18269680122e5a83ce390882 285 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 51 280 1.4E-60 T 12-10-2018 BAMF_1128 96b8492f18269680122e5a83ce390882 285 Gene3D G3DSA:3.40.50.720 2 282 2.7E-85 T 12-10-2018 BAMF_1128 96b8492f18269680122e5a83ce390882 285 SUPERFAMILY SSF51735 40 282 4.8E-82 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_1128 96b8492f18269680122e5a83ce390882 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 190 209 2.5E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1128 96b8492f18269680122e5a83ce390882 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 118 129 2.5E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1128 96b8492f18269680122e5a83ce390882 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 170 178 2.5E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_1128 96b8492f18269680122e5a83ce390882 285 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 177 205 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_0753 574de699ebbc3c1bc943b2bccca5729c 171 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 170 1.7E-58 T 12-10-2018 IPR006286 Deglycase PfpI BAMF_0753 574de699ebbc3c1bc943b2bccca5729c 171 SUPERFAMILY SSF52317 1 170 2.29E-48 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_0753 574de699ebbc3c1bc943b2bccca5729c 171 Gene3D G3DSA:3.40.50.880 1 171 3.3E-56 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_0753 574de699ebbc3c1bc943b2bccca5729c 171 Pfam PF01965 DJ-1/PfpI family 3 168 1.1E-56 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BAMF_0717 1a13671d03c3f6520124abd94c78c1aa 421 SUPERFAMILY SSF51126 23 420 2.2E-85 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BAMF_0717 1a13671d03c3f6520124abd94c78c1aa 421 SMART SM00656 101 353 1.4E-52 T 12-10-2018 IPR002022 Pectate lyase BAMF_0717 1a13671d03c3f6520124abd94c78c1aa 421 Pfam PF00544 Pectate lyase 130 347 6.9E-49 T 12-10-2018 IPR002022 Pectate lyase BAMF_0717 1a13671d03c3f6520124abd94c78c1aa 421 Gene3D G3DSA:2.160.20.10 22 421 1.9E-173 T 12-10-2018 IPR012334 Pectin lyase fold BAMF_0713 94d9b5e4f847553f0f1eda4119f0d90b 104 Gene3D G3DSA:3.40.50.720 2 74 2.8E-32 T 12-10-2018 BAMF_0713 94d9b5e4f847553f0f1eda4119f0d90b 104 Gene3D G3DSA:3.90.180.10 75 102 2.8E-32 T 12-10-2018 BAMF_0713 94d9b5e4f847553f0f1eda4119f0d90b 104 SUPERFAMILY SSF50129 56 103 1.08E-6 T 12-10-2018 IPR011032 GroES-like superfamily BAMF_0483 e2c80a4cc49c4d73f8a82e63232ad9b5 206 SUPERFAMILY SSF50475 9 176 3.32E-32 T 12-10-2018 BAMF_0483 e2c80a4cc49c4d73f8a82e63232ad9b5 206 Gene3D G3DSA:2.30.110.10 1 200 4.8E-64 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BAMF_0483 e2c80a4cc49c4d73f8a82e63232ad9b5 206 PIRSF PIRSF010372 1 201 1.7E-54 T 12-10-2018 IPR007396 Transcriptional regulator PAI 2-type BAMF_0483 e2c80a4cc49c4d73f8a82e63232ad9b5 206 Pfam PF04299 Putative FMN-binding domain 1 156 5.0E-44 T 12-10-2018 IPR007396 Transcriptional regulator PAI 2-type BAMF_1010 657ca287835e1c68b916edba5fcad4dd 111 SUPERFAMILY SSF53187 26 108 8.93E-24 T 12-10-2018 BAMF_1010 657ca287835e1c68b916edba5fcad4dd 111 Gene3D G3DSA:3.40.630.10 28 103 4.9E-33 T 12-10-2018 BAMF_1010 657ca287835e1c68b916edba5fcad4dd 111 Pfam PF01546 Peptidase family M20/M25/M40 20 105 2.1E-16 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BAMF_1010 657ca287835e1c68b916edba5fcad4dd 111 Gene3D G3DSA:3.30.70.360 4 27 4.9E-33 T 12-10-2018 BAMF_1148 eee41cd3081422fa0c67a9ce335ba197 1166 Pfam PF12705 PD-(D/E)XK nuclease superfamily 791 1131 1.1E-55 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BAMF_1148 eee41cd3081422fa0c67a9ce335ba197 1166 Gene3D G3DSA:3.40.50.300 279 458 1.7E-34 T 12-10-2018 BAMF_1148 eee41cd3081422fa0c67a9ce335ba197 1166 Gene3D G3DSA:3.40.50.300 562 700 4.4E-45 T 12-10-2018 BAMF_1148 eee41cd3081422fa0c67a9ce335ba197 1166 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 2 1163 0.0 T 12-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 BAMF_1148 eee41cd3081422fa0c67a9ce335ba197 1166 Gene3D G3DSA:3.40.50.300 111 278 7.5E-36 T 12-10-2018 BAMF_1148 eee41cd3081422fa0c67a9ce335ba197 1166 Hamap MF_01452 ATP-dependent helicase/deoxyribonuclease subunit B [addB]. 2 1162 63.317 T 12-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 BAMF_1148 eee41cd3081422fa0c67a9ce335ba197 1166 SUPERFAMILY SSF52540 305 750 3.51E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3186 6e1a5ac5da14db5ac14b6f8e57c8ce3f 381 Pfam PF12698 ABC-2 family transporter protein 19 369 1.7E-37 T 12-10-2018 BAMF_3186 6e1a5ac5da14db5ac14b6f8e57c8ce3f 381 Gene3D G3DSA:3.40.1710.10 41 143 9.0E-8 T 12-10-2018 BAMF_2271 fd302ae1e9fa166a76ae5773957b1622 356 Pfam PF01594 AI-2E family transporter 17 345 7.3E-81 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like BAMF_2770 d165f2defe96876bdefd1cac571e0cf9 215 SUPERFAMILY SSF54631 1 130 4.17E-29 T 12-10-2018 BAMF_2770 d165f2defe96876bdefd1cac571e0cf9 215 Gene3D G3DSA:3.10.580.10 1 151 3.4E-38 T 12-10-2018 BAMF_2770 d165f2defe96876bdefd1cac571e0cf9 215 SMART SM00116 10 58 3.9E-12 T 12-10-2018 IPR000644 CBS domain BAMF_2770 d165f2defe96876bdefd1cac571e0cf9 215 SMART SM00116 82 129 1.5E-9 T 12-10-2018 IPR000644 CBS domain BAMF_2770 d165f2defe96876bdefd1cac571e0cf9 215 Pfam PF00571 CBS domain 4 56 4.0E-14 T 12-10-2018 IPR000644 CBS domain BAMF_2770 d165f2defe96876bdefd1cac571e0cf9 215 Pfam PF00571 CBS domain 75 127 2.2E-8 T 12-10-2018 IPR000644 CBS domain BAMF_2371 06ddbaea23d792a8f1b80d948dd497d2 166 Pfam PF15980 Putative Competence protein ComGF 65 152 1.7E-13 T 12-10-2018 IPR016977 Competence operon G, ComGF BAMF_0535 db496bb7413b865fb4ac12c68a3d95d4 56 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 1 45 4.5E-19 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BAMF_0535 db496bb7413b865fb4ac12c68a3d95d4 56 Pfam PF02416 mttA/Hcf106 family 2 54 1.8E-23 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 BAMF_0535 db496bb7413b865fb4ac12c68a3d95d4 56 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 55 16.701 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BAMF_2761 ed33e8edc6e588c416458c3a1cf53c11 251 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 53 237 1.7E-14 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain BAMF_2761 ed33e8edc6e588c416458c3a1cf53c11 251 SUPERFAMILY SSF52266 44 243 4.5E-39 T 12-10-2018 BAMF_2761 ed33e8edc6e588c416458c3a1cf53c11 251 Gene3D G3DSA:3.40.50.1110 45 249 4.9E-44 T 12-10-2018 IPR036514 SGNH hydrolase superfamily BAMF_1834 81e36de288451a0ba5a60ef6a2e0212a 371 Gene3D G3DSA:1.25.40.10 1 370 1.6E-82 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_1834 81e36de288451a0ba5a60ef6a2e0212a 371 SUPERFAMILY SSF48452 153 325 5.78E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_3342 74958abab112d257a8be55e374bb6dd4 216 Hamap MF_01250 Pyrophosphatase PpaX [ppaX]. 4 216 43.394 T 12-10-2018 IPR023733 Pyrophosphatase PpaX GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BAMF_3342 74958abab112d257a8be55e374bb6dd4 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 184 1.5E-55 T 12-10-2018 BAMF_3342 74958abab112d257a8be55e374bb6dd4 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 75 178 7.5E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_3342 74958abab112d257a8be55e374bb6dd4 216 Gene3D G3DSA:1.10.150.240 21 83 1.2E-51 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BAMF_3342 74958abab112d257a8be55e374bb6dd4 216 SUPERFAMILY SSF56784 5 212 5.17E-58 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_3342 74958abab112d257a8be55e374bb6dd4 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 74 184 8.5E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BAMF_3342 74958abab112d257a8be55e374bb6dd4 216 Gene3D G3DSA:3.40.50.1000 9 188 1.2E-51 T 12-10-2018 IPR023214 HAD superfamily BAMF_1295 eae06f60a49f8ee8e3e918128fa3dac8 104 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 10 101 2.1E-31 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BAMF_1295 eae06f60a49f8ee8e3e918128fa3dac8 104 SUPERFAMILY SSF46973 1 101 4.45E-32 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 BAMF_1295 eae06f60a49f8ee8e3e918128fa3dac8 104 Gene3D G3DSA:1.20.58.80 1 104 6.1E-35 T 12-10-2018 BAMF_1295 eae06f60a49f8ee8e3e918128fa3dac8 104 PIRSF PIRSF000699 1 104 8.2E-35 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BAMF_1186 00f3f97610a5e3190907b778b72b2c25 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 264 7.3E-60 T 12-10-2018 IPR000150 Cof family GO:0016787 BAMF_1186 00f3f97610a5e3190907b778b72b2c25 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 237 1.3E-27 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BAMF_1186 00f3f97610a5e3190907b778b72b2c25 270 Gene3D G3DSA:3.40.50.1000 7 264 5.6E-65 T 12-10-2018 IPR023214 HAD superfamily BAMF_1186 00f3f97610a5e3190907b778b72b2c25 270 Gene3D G3DSA:3.30.1240.10 87 193 5.6E-65 T 12-10-2018 BAMF_1186 00f3f97610a5e3190907b778b72b2c25 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 264 1.3E-65 T 12-10-2018 BAMF_1186 00f3f97610a5e3190907b778b72b2c25 270 SUPERFAMILY SSF56784 4 268 2.41E-69 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_1824 366dc58dd023673f833fe9a0b139403d 110 Pfam PF08863 YolD-like protein 14 106 3.5E-22 T 12-10-2018 IPR014962 YolD-like protein BAMF_1633 b4049e00c177cbe42a4ac1e6f7fcd157 261 SUPERFAMILY SSF53800 2 242 2.07E-47 T 12-10-2018 BAMF_1633 b4049e00c177cbe42a4ac1e6f7fcd157 261 Gene3D G3DSA:3.40.50.1400 126 246 2.4E-19 T 12-10-2018 BAMF_1633 b4049e00c177cbe42a4ac1e6f7fcd157 261 Pfam PF01903 CbiX 10 114 1.1E-27 T 12-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 BAMF_1633 b4049e00c177cbe42a4ac1e6f7fcd157 261 Pfam PF01903 CbiX 134 234 4.5E-19 T 12-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 BAMF_1633 b4049e00c177cbe42a4ac1e6f7fcd157 261 Gene3D G3DSA:3.40.50.1400 1 120 5.5E-26 T 12-10-2018 BAMF_3003 51462fbab3cf1ac538a2639c3fdace6f 213 SUPERFAMILY SSF50685 119 161 1.36E-7 T 12-10-2018 IPR036908 RlpA-like domain superfamily BAMF_3003 51462fbab3cf1ac538a2639c3fdace6f 213 Pfam PF06725 3D domain 119 181 5.2E-19 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 BAMF_3888 19b50a7bffee81d62f872532f7494709 292 PIRSF PIRSF006483 1 291 4.1E-75 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BAMF_3888 19b50a7bffee81d62f872532f7494709 292 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 229 283 1.2E-18 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 BAMF_3888 19b50a7bffee81d62f872532f7494709 292 Gene3D G3DSA:3.30.70.120 201 275 3.8E-15 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BAMF_3888 19b50a7bffee81d62f872532f7494709 292 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 21 223 1.0E-48 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BAMF_0171 7d11ea458b80cbdde31ed657c182bc59 427 SUPERFAMILY SSF56601 34 394 7.97E-78 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_0171 7d11ea458b80cbdde31ed657c182bc59 427 Pfam PF00144 Beta-lactamase 38 406 2.4E-73 T 12-10-2018 IPR001466 Beta-lactamase-related BAMF_0171 7d11ea458b80cbdde31ed657c182bc59 427 Gene3D G3DSA:3.40.710.10 23 398 1.1E-85 T 12-10-2018 BAMF_0171 7d11ea458b80cbdde31ed657c182bc59 427 Hamap MF_01034 UPF0214 protein YfeW [yfeW]. 1 427 70.478 T 12-10-2018 IPR022849 Peptidase S12, UPF0214, YfeW-type BAMF_3174 dc836710b201970bac7aded324a09484 470 Pfam PF13520 Amino acid permease 8 436 5.8E-57 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_3174 dc836710b201970bac7aded324a09484 470 PIRSF PIRSF006060 1 469 1.5E-59 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_3174 dc836710b201970bac7aded324a09484 470 Gene3D G3DSA:1.20.1740.10 2 470 6.0E-68 T 12-10-2018 BAMF_3243 0fa7be8f2460af772bb853ed0624f20d 305 SUPERFAMILY SSF51658 7 264 4.32E-14 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily BAMF_3243 0fa7be8f2460af772bb853ed0624f20d 305 Gene3D G3DSA:3.20.20.150 13 292 2.6E-19 T 12-10-2018 BAMF_0579 1e46d84540dae7e12055d89030bc7563 483 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 33 460 6.5E-102 T 12-10-2018 IPR021145 Portal protein BAMF_0579 1e46d84540dae7e12055d89030bc7563 483 TIGRFAM TIGR01538 portal_SPP1: phage portal protein, SPP1 family 27 458 1.8E-111 T 12-10-2018 IPR006428 Portal protein, SPP1-type BAMF_0857 9967d1dbf9b2a17dc06c09a0aeaed1a9 279 Pfam PF05709 Phage tail protein 33 279 2.2E-29 T 12-10-2018 IPR008841 Siphovirus-type tail component BAMF_3645 e0c76156ce42b21f25b513eb8dcc58a4 95 Gene3D G3DSA:3.30.70.100 1 95 6.9E-17 T 12-10-2018 BAMF_3645 e0c76156ce42b21f25b513eb8dcc58a4 95 SUPERFAMILY SSF54909 1 94 1.07E-14 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BAMF_3645 e0c76156ce42b21f25b513eb8dcc58a4 95 SMART SM00886 2 95 2.2E-13 T 12-10-2018 IPR013097 Stress responsive alpha-beta barrel BAMF_3645 e0c76156ce42b21f25b513eb8dcc58a4 95 Pfam PF07876 Stress responsive A/B Barrel Domain 6 89 1.1E-14 T 12-10-2018 IPR013097 Stress responsive alpha-beta barrel BAMF_2113 7337af77697b8520b3aec79b7083843b 639 SMART SM00491 497 618 9.7E-9 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BAMF_2113 7337af77697b8520b3aec79b7083843b 639 Gene3D G3DSA:3.40.50.300 459 633 1.9E-28 T 12-10-2018 BAMF_2113 7337af77697b8520b3aec79b7083843b 639 SUPERFAMILY SSF52540 52 614 2.15E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2113 7337af77697b8520b3aec79b7083843b 639 Gene3D G3DSA:3.40.50.300 37 316 1.3E-29 T 12-10-2018 BAMF_2113 7337af77697b8520b3aec79b7083843b 639 Pfam PF13307 Helicase C-terminal domain 482 615 1.3E-25 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BAMF_3618 0276b688c23c0f0c3d1e4bf817baa080 315 SUPERFAMILY SSF51735 1 311 1.83E-93 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3618 0276b688c23c0f0c3d1e4bf817baa080 315 Gene3D G3DSA:3.90.25.10 193 311 4.0E-120 T 12-10-2018 BAMF_3618 0276b688c23c0f0c3d1e4bf817baa080 315 Gene3D G3DSA:3.40.50.720 5 305 4.0E-120 T 12-10-2018 BAMF_3618 0276b688c23c0f0c3d1e4bf817baa080 315 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 306 2.1E-80 T 12-10-2018 IPR016040 NAD(P)-binding domain BAMF_3618 0276b688c23c0f0c3d1e4bf817baa080 315 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 5 313 6.6E-141 T 12-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 BAMF_3394 80aada14a1809f399154870e1f972a12 358 ProSitePatterns PS01348 MraY family signature 2. 153 164 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_3394 80aada14a1809f399154870e1f972a12 358 Pfam PF00953 Glycosyl transferase family 4 78 233 1.7E-41 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 BAMF_2236 7080b3f2886c55aa673a0d3e73fe0bd3 116 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 2 111 2.8E-40 T 12-10-2018 IPR005562 SpoVA BAMF_2236 7080b3f2886c55aa673a0d3e73fe0bd3 116 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 7.3E-54 T 12-10-2018 IPR014204 Sporulation stage V, protein AE BAMF_2917 af8f8b3b50fe48c842ac5f1f55ee0fe5 386 Pfam PF01594 AI-2E family transporter 32 363 3.1E-85 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like BAMF_3061 e4ab7f8f92698d98fd2837a69ef304f8 90 Pfam PF07853 Protein of unknown function (DUF1648) 13 59 6.6E-12 T 12-10-2018 IPR012867 Domain of unknown function DUF1648 BAMF_0619 47c2342ae399931b82f10ac0e1064122 348 Gene3D G3DSA:2.120.10.30 196 344 3.9E-11 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BAMF_0619 47c2342ae399931b82f10ac0e1064122 348 SUPERFAMILY SSF69304 43 344 2.88E-19 T 12-10-2018 BAMF_0619 47c2342ae399931b82f10ac0e1064122 348 Pfam PF07676 WD40-like Beta Propeller Repeat 278 301 0.25 T 12-10-2018 IPR011659 WD40-like Beta Propeller BAMF_0619 47c2342ae399931b82f10ac0e1064122 348 Pfam PF07676 WD40-like Beta Propeller Repeat 220 248 6.6E-4 T 12-10-2018 IPR011659 WD40-like Beta Propeller BAMF_3085 1f354a7310da300c4a58ab95672db6e9 146 Pfam PF01391 Collagen triple helix repeat (20 copies) 41 89 2.1E-10 T 12-10-2018 IPR008160 Collagen triple helix repeat BAMF_3085 1f354a7310da300c4a58ab95672db6e9 146 Gene3D G3DSA:1.20.5.320 60 111 4.2E-5 T 12-10-2018 BAMF_1333 defc8ab25b27c281e529d616b4a45b04 112 Pfam PF01381 Helix-turn-helix 10 58 6.2E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_1333 defc8ab25b27c281e529d616b4a45b04 112 SMART SM00530 5 58 3.7E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_1333 defc8ab25b27c281e529d616b4a45b04 112 Gene3D G3DSA:1.10.260.40 1 108 6.7E-25 T 12-10-2018 BAMF_1333 defc8ab25b27c281e529d616b4a45b04 112 SUPERFAMILY SSF47413 2 65 4.29E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_0789 182e668ab204749035e935bcf65bb4dc 528 Pfam PF00367 phosphotransferase system, EIIB 457 486 7.0E-15 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BAMF_0789 182e668ab204749035e935bcf65bb4dc 528 Pfam PF02378 Phosphotransferase system, EIIC 10 345 4.4E-74 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BAMF_0789 182e668ab204749035e935bcf65bb4dc 528 Gene3D G3DSA:3.30.1360.60 448 528 2.2E-25 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BAMF_0789 182e668ab204749035e935bcf65bb4dc 528 SUPERFAMILY SSF55604 452 526 7.45E-19 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BAMF_0789 182e668ab204749035e935bcf65bb4dc 528 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 465 482 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BAMF_0789 182e668ab204749035e935bcf65bb4dc 528 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 2 526 8.9E-264 T 12-10-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 BAMF_0789 182e668ab204749035e935bcf65bb4dc 528 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 59 357 1.5E-90 T 12-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 BAMF_0789 182e668ab204749035e935bcf65bb4dc 528 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 408 512 3.5E-27 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BAMF_3498 76ba86341e317958b93de4a1ff40ce87 149 Pfam PF17319 Family of unknown function (DUF5362) 22 116 5.7E-10 T 12-10-2018 IPR035287 Protein of unknown function DUF5362 BAMF_3498 76ba86341e317958b93de4a1ff40ce87 149 ProDom PD031895 YWNG MEMBRANE TRANSMEMBRANE YWNC 19 107 1.0E-26 T 12-10-2018 IPR035287 Protein of unknown function DUF5362 BAMF_0676 dba921964d84f5a312b15f0b0ebfdde8 241 Pfam PF04740 LXG domain of WXG superfamily 2 200 1.8E-49 T 12-10-2018 IPR006829 LXG domain BAMF_1498 eb5ac813df22aee9ca8b153cf0236fd1 50 SUPERFAMILY SSF52833 2 47 9.39E-8 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_1498 eb5ac813df22aee9ca8b153cf0236fd1 50 Gene3D G3DSA:3.40.30.10 1 49 6.2E-9 T 12-10-2018 BAMF_3584 427c7334734aa3cdebbc4186fb328600 433 Gene3D G3DSA:1.10.3210.10 11 401 4.9E-170 T 12-10-2018 BAMF_3584 427c7334734aa3cdebbc4186fb328600 433 SUPERFAMILY SSF109604 6 411 3.62E-121 T 12-10-2018 BAMF_3584 427c7334734aa3cdebbc4186fb328600 433 Pfam PF01966 HD domain 61 181 4.8E-18 T 12-10-2018 IPR006674 HD domain BAMF_3584 427c7334734aa3cdebbc4186fb328600 433 Gene3D G3DSA:1.20.1250.30 235 412 4.9E-170 T 12-10-2018 BAMF_3584 427c7334734aa3cdebbc4186fb328600 433 SMART SM00471 57 187 3.4E-13 T 12-10-2018 IPR003607 HD/PDEase domain BAMF_1814 1ef47abb4d8331cfa98251ebac7de0e6 133 Gene3D G3DSA:1.10.1660.10 1 84 1.2E-26 T 12-10-2018 BAMF_1814 1ef47abb4d8331cfa98251ebac7de0e6 133 SUPERFAMILY SSF46955 12 82 5.04E-19 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BAMF_1814 1ef47abb4d8331cfa98251ebac7de0e6 133 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_1814 1ef47abb4d8331cfa98251ebac7de0e6 133 SMART SM00422 12 80 1.2E-28 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_1814 1ef47abb4d8331cfa98251ebac7de0e6 133 Pfam PF13411 MerR HTH family regulatory protein 13 79 1.6E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_3263 7cff4f1aa9f088010e03760f470178fc 446 Gene3D G3DSA:1.20.1740.10 6 446 4.5E-69 T 12-10-2018 BAMF_3263 7cff4f1aa9f088010e03760f470178fc 446 Pfam PF00324 Amino acid permease 16 421 1.5E-97 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BAMF_3263 7cff4f1aa9f088010e03760f470178fc 446 PIRSF PIRSF006060 1 445 3.4E-72 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_2877 338c960c0c0a6f0b08d1e0393cc95ca5 391 SUPERFAMILY SSF63380 146 247 1.25E-27 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BAMF_2877 338c960c0c0a6f0b08d1e0393cc95ca5 391 SUPERFAMILY SSF46458 1 149 2.0E-43 T 12-10-2018 IPR009050 Globin-like superfamily BAMF_2877 338c960c0c0a6f0b08d1e0393cc95ca5 391 Pfam PF00970 Oxidoreductase FAD-binding domain 152 248 7.3E-13 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BAMF_2877 338c960c0c0a6f0b08d1e0393cc95ca5 391 Pfam PF00175 Oxidoreductase NAD-binding domain 258 365 6.5E-17 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BAMF_2877 338c960c0c0a6f0b08d1e0393cc95ca5 391 Gene3D G3DSA:2.40.30.10 146 248 1.1E-35 T 12-10-2018 BAMF_2877 338c960c0c0a6f0b08d1e0393cc95ca5 391 Gene3D G3DSA:3.40.50.80 249 390 8.9E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BAMF_2877 338c960c0c0a6f0b08d1e0393cc95ca5 391 PRINTS PR00409 Phthalate dioxygenase reductase family signature 174 184 8.6E-13 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 BAMF_2877 338c960c0c0a6f0b08d1e0393cc95ca5 391 PRINTS PR00409 Phthalate dioxygenase reductase family signature 221 235 8.6E-13 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 BAMF_2877 338c960c0c0a6f0b08d1e0393cc95ca5 391 PRINTS PR00409 Phthalate dioxygenase reductase family signature 235 249 8.6E-13 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 BAMF_2877 338c960c0c0a6f0b08d1e0393cc95ca5 391 PRINTS PR00409 Phthalate dioxygenase reductase family signature 257 276 8.6E-13 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 BAMF_2877 338c960c0c0a6f0b08d1e0393cc95ca5 391 Gene3D G3DSA:1.10.490.10 1 145 1.8E-58 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 BAMF_2877 338c960c0c0a6f0b08d1e0393cc95ca5 391 SUPERFAMILY SSF52343 252 386 9.04E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BAMF_2877 338c960c0c0a6f0b08d1e0393cc95ca5 391 Pfam PF00042 Globin 8 102 7.6E-11 T 12-10-2018 IPR000971 Globin GO:0020037 BAMF_2278 06c42df644d9aa246ff634902820cf40 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 61 1.7E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_2278 06c42df644d9aa246ff634902820cf40 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_2278 06c42df644d9aa246ff634902820cf40 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_2278 06c42df644d9aa246ff634902820cf40 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BAMF_2278 06c42df644d9aa246ff634902820cf40 292 Gene3D G3DSA:1.10.10.10 1 91 3.2E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2278 06c42df644d9aa246ff634902820cf40 292 Gene3D G3DSA:3.40.190.290 92 290 1.4E-38 T 12-10-2018 BAMF_2278 06c42df644d9aa246ff634902820cf40 292 SUPERFAMILY SSF46785 2 111 7.62E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2278 06c42df644d9aa246ff634902820cf40 292 Pfam PF03466 LysR substrate binding domain 88 285 3.3E-39 T 12-10-2018 IPR005119 LysR, substrate-binding BAMF_2278 06c42df644d9aa246ff634902820cf40 292 SUPERFAMILY SSF53850 89 286 2.82E-34 T 12-10-2018 BAMF_0590 7998911cb0f7c96355a08b17c5ed6964 104 Gene3D G3DSA:2.60.40.10 18 103 1.7E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold BAMF_0590 7998911cb0f7c96355a08b17c5ed6964 104 Pfam PF00041 Fibronectin type III domain 21 91 1.9E-8 T 12-10-2018 IPR003961 Fibronectin type III GO:0005515 BAMF_0590 7998911cb0f7c96355a08b17c5ed6964 104 SUPERFAMILY SSF49265 18 100 6.83E-16 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 BAMF_0590 7998911cb0f7c96355a08b17c5ed6964 104 SMART SM00060 19 90 1.8E-9 T 12-10-2018 IPR003961 Fibronectin type III GO:0005515 BAMF_0390 608d1fad3e5047b4c8086041e431b902 96 Pfam PF12823 Domain of unknown function (DUF3817) 7 92 2.4E-21 T 12-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane BAMF_0390 608d1fad3e5047b4c8086041e431b902 96 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 9 92 2.6E-27 T 12-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane BAMF_0016 00d1a255ec6f0ff41dcc44d18594f1bb 207 Pfam PF01712 Deoxynucleoside kinase 7 207 7.5E-58 T 12-10-2018 IPR031314 Deoxynucleoside kinase domain BAMF_0016 00d1a255ec6f0ff41dcc44d18594f1bb 207 Gene3D G3DSA:3.40.50.300 5 207 2.9E-48 T 12-10-2018 BAMF_0016 00d1a255ec6f0ff41dcc44d18594f1bb 207 PIRSF PIRSF000705 1 207 1.9E-58 T 12-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 BAMF_0016 00d1a255ec6f0ff41dcc44d18594f1bb 207 SUPERFAMILY SSF52540 1 205 2.95E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1042 38e3badfad3c22c80bdeb27505b4de11 467 PIRSF PIRSF006060 13 466 2.4E-92 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_1042 38e3badfad3c22c80bdeb27505b4de11 467 Pfam PF13520 Amino acid permease 28 434 6.1E-66 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_1042 38e3badfad3c22c80bdeb27505b4de11 467 Gene3D G3DSA:1.20.1740.10 22 466 2.6E-130 T 12-10-2018 BAMF_1042 38e3badfad3c22c80bdeb27505b4de11 467 TIGRFAM TIGR00909 2A0306: amino acid transporter 24 456 1.7E-188 T 12-10-2018 IPR004758 Amino acid transporter BAMF_1097 e21783a773fa0197bbacb0a9d6a56154 145 SUPERFAMILY SSF54197 5 141 9.59E-49 T 12-10-2018 IPR036265 HIT-like superfamily BAMF_1097 e21783a773fa0197bbacb0a9d6a56154 145 ProSitePatterns PS00892 HIT domain signature. 89 107 - T 12-10-2018 IPR019808 Histidine triad, conserved site BAMF_1097 e21783a773fa0197bbacb0a9d6a56154 145 Pfam PF01230 HIT domain 16 109 3.3E-29 T 12-10-2018 IPR001310 Histidine triad (HIT) protein BAMF_1097 e21783a773fa0197bbacb0a9d6a56154 145 Gene3D G3DSA:1.20.5.1170 117 145 1.7E-14 T 12-10-2018 BAMF_1097 e21783a773fa0197bbacb0a9d6a56154 145 Gene3D G3DSA:3.30.428.10 1 115 3.6E-42 T 12-10-2018 IPR036265 HIT-like superfamily BAMF_1097 e21783a773fa0197bbacb0a9d6a56154 145 PRINTS PR00332 Histidine triad family signature 8 24 8.5E-18 T 12-10-2018 IPR001310 Histidine triad (HIT) protein BAMF_1097 e21783a773fa0197bbacb0a9d6a56154 145 PRINTS PR00332 Histidine triad family signature 96 106 8.5E-18 T 12-10-2018 IPR001310 Histidine triad (HIT) protein BAMF_1097 e21783a773fa0197bbacb0a9d6a56154 145 PRINTS PR00332 Histidine triad family signature 29 47 8.5E-18 T 12-10-2018 IPR001310 Histidine triad (HIT) protein BAMF_2416 9c755d1c6a9cd4a5827c0f29242d2b3d 266 PIRSF PIRSF018637 33 266 2.1E-88 T 12-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 BAMF_2416 9c755d1c6a9cd4a5827c0f29242d2b3d 266 SUPERFAMILY SSF53335 35 133 1.07E-7 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_2416 9c755d1c6a9cd4a5827c0f29242d2b3d 266 Gene3D G3DSA:3.40.50.150 29 193 8.4E-54 T 12-10-2018 BAMF_2416 9c755d1c6a9cd4a5827c0f29242d2b3d 266 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 52 261 2.3E-74 T 12-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 BAMF_0564 ad4de4dc1553fed0e393c0c06c448e74 199 Pfam PF08761 dUTPase 77 199 2.0E-16 T 12-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 BAMF_0564 ad4de4dc1553fed0e393c0c06c448e74 199 Pfam PF08761 dUTPase 2 59 3.2E-12 T 12-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 BAMF_0564 ad4de4dc1553fed0e393c0c06c448e74 199 Gene3D G3DSA:1.10.4010.10 77 199 2.9E-7 T 12-10-2018 BAMF_0564 ad4de4dc1553fed0e393c0c06c448e74 199 SUPERFAMILY SSF101386 2 199 2.06E-36 T 12-10-2018 BAMF_0564 ad4de4dc1553fed0e393c0c06c448e74 199 PIRSF PIRSF030140 1 199 6.4E-42 T 12-10-2018 IPR016947 Uncharacterised phage-associated protein UCP030140 BAMF_2915 4ed8c6ec113bf63afba754f2f7ff327b 383 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 66 122 7.5E-11 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BAMF_2915 4ed8c6ec113bf63afba754f2f7ff327b 383 Pfam PF14657 Arm DNA-binding domain 16 59 4.8E-11 T 12-10-2018 IPR028259 AP2-like integrase, N-terminal domain BAMF_2915 4ed8c6ec113bf63afba754f2f7ff327b 383 Gene3D G3DSA:1.10.443.10 174 379 1.1E-53 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BAMF_2915 4ed8c6ec113bf63afba754f2f7ff327b 383 SUPERFAMILY SSF56349 65 373 7.06E-66 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BAMF_2915 4ed8c6ec113bf63afba754f2f7ff327b 383 Gene3D G3DSA:1.10.150.130 61 173 8.7E-22 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal BAMF_2915 4ed8c6ec113bf63afba754f2f7ff327b 383 Pfam PF00589 Phage integrase family 184 365 1.2E-27 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BAMF_3230 536b8df9d81d8809c9bb17a67228ec25 217 SUPERFAMILY SSF161098 13 196 4.45E-38 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3230 536b8df9d81d8809c9bb17a67228ec25 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 205 3.3E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_3230 536b8df9d81d8809c9bb17a67228ec25 217 Gene3D G3DSA:1.10.3720.10 14 206 7.8E-31 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_1797 64b8d3e5ce593bbf6259ac6d3cd6f9b8 150 TIGRFAM TIGR03563 perox_SACOL1771: peroxiredoxin, SACOL1771 subfamily 4 141 2.7E-67 T 12-10-2018 IPR019905 Peroxiredoxin OsmC-like protein, Firmicutes BAMF_1797 64b8d3e5ce593bbf6259ac6d3cd6f9b8 150 Pfam PF02566 OsmC-like protein 39 142 4.4E-17 T 12-10-2018 IPR003718 OsmC/Ohr family BAMF_1797 64b8d3e5ce593bbf6259ac6d3cd6f9b8 150 Gene3D G3DSA:3.30.300.20 7 146 2.7E-32 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BAMF_1797 64b8d3e5ce593bbf6259ac6d3cd6f9b8 150 SUPERFAMILY SSF82784 2 145 3.27E-34 T 12-10-2018 IPR036102 OsmC/Ohr superfamily BAMF_0736 78779ad020af4921f3cb16fcc972296a 103 Gene3D G3DSA:1.10.760.20 20 103 7.8E-31 T 12-10-2018 IPR038292 YmfJ/YflH superfamily BAMF_0736 78779ad020af4921f3cb16fcc972296a 103 Pfam PF11588 Protein of unknown function (DUF3243) 24 101 3.5E-28 T 12-10-2018 IPR021637 Protein of unknown function DUF3243 BAMF_0035 dce17e28821bbd0dac3091e63b12e5ef 99 Pfam PF01541 GIY-YIG catalytic domain 6 77 2.0E-18 T 12-10-2018 IPR000305 GIY-YIG endonuclease BAMF_0035 dce17e28821bbd0dac3091e63b12e5ef 99 SMART SM00465 5 83 5.3E-5 T 12-10-2018 IPR000305 GIY-YIG endonuclease BAMF_0035 dce17e28821bbd0dac3091e63b12e5ef 99 Gene3D G3DSA:3.40.1440.10 1 96 1.3E-34 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BAMF_0035 dce17e28821bbd0dac3091e63b12e5ef 99 SUPERFAMILY SSF82771 5 80 6.15E-14 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BAMF_1734 d6c92b45b3cecd97b8ef33de0279ffe2 100 ProSitePatterns PS01082 Ribosomal protein L7Ae signature. 56 73 - T 12-10-2018 IPR004037 Ribosomal protein L7Ae conserved site GO:0042254|GO:1990904 Reactome: R-HSA-6791226 BAMF_1734 d6c92b45b3cecd97b8ef33de0279ffe2 100 SUPERFAMILY SSF55315 6 99 7.97E-26 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BAMF_1734 d6c92b45b3cecd97b8ef33de0279ffe2 100 Gene3D G3DSA:3.30.1330.30 1 100 5.0E-42 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BAMF_1734 d6c92b45b3cecd97b8ef33de0279ffe2 100 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 8 95 5.8E-20 T 12-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 BAMF_3145 5ac4e6f844085b8518a274c0ae5abd8c 61 Pfam PF13113 Protein of unknown function (DUF3970) 2 54 8.1E-27 T 12-10-2018 IPR025088 Protein of unknown function DUF3970 BAMF_0518 52fa37d6b99c182d71f8c482c61cd162 404 Gene3D G3DSA:1.20.1250.20 212 399 1.3E-19 T 12-10-2018 BAMF_0518 52fa37d6b99c182d71f8c482c61cd162 404 Gene3D G3DSA:1.20.1250.20 11 202 5.2E-17 T 12-10-2018 BAMF_0518 52fa37d6b99c182d71f8c482c61cd162 404 SUPERFAMILY SSF103473 11 393 4.58E-47 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0518 52fa37d6b99c182d71f8c482c61cd162 404 Pfam PF07690 Major Facilitator Superfamily 34 358 8.5E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_1271 907208d197f5b076edf48a4ca8eb9a2e 323 Pfam PF02558 Ketopantoate reductase PanE/ApbA 12 164 8.0E-18 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain BAMF_1271 907208d197f5b076edf48a4ca8eb9a2e 323 Gene3D G3DSA:3.40.50.720 10 186 1.1E-21 T 12-10-2018 BAMF_1271 907208d197f5b076edf48a4ca8eb9a2e 323 SUPERFAMILY SSF51735 10 123 1.93E-9 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_0917 982de2ba2e25c571aacb3be4c4dc3814 231 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 13 222 4.9E-35 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 BAMF_0917 982de2ba2e25c571aacb3be4c4dc3814 231 Pfam PF02511 Thymidylate synthase complementing protein 15 220 5.9E-34 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 BAMF_0917 982de2ba2e25c571aacb3be4c4dc3814 231 SUPERFAMILY SSF69796 3 222 2.62E-37 T 12-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 BAMF_0917 982de2ba2e25c571aacb3be4c4dc3814 231 Gene3D G3DSA:3.30.1360.170 1 230 6.1E-64 T 12-10-2018 BAMF_2465 8ccaa3359395ce17db4d0cba0bf0006f 366 SUPERFAMILY SSF52540 61 277 7.02E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2465 8ccaa3359395ce17db4d0cba0bf0006f 366 Gene3D G3DSA:3.40.50.300 56 224 2.3E-51 T 12-10-2018 BAMF_2465 8ccaa3359395ce17db4d0cba0bf0006f 366 Pfam PF01926 50S ribosome-binding GTPase 162 224 2.9E-13 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BAMF_2465 8ccaa3359395ce17db4d0cba0bf0006f 366 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 6 366 1.6E-163 T 12-10-2018 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH BAMF_1388 cebcb598321b21348913d66c44578f9a 323 Gene3D G3DSA:3.40.50.300 4 323 9.4E-102 T 12-10-2018 BAMF_1388 cebcb598321b21348913d66c44578f9a 323 Pfam PF00005 ABC transporter 28 179 3.2E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_1388 cebcb598321b21348913d66c44578f9a 323 SMART SM00382 36 229 4.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_1388 cebcb598321b21348913d66c44578f9a 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 318 1.6E-25 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BAMF_1388 cebcb598321b21348913d66c44578f9a 323 SUPERFAMILY SSF52540 36 315 2.6E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1388 cebcb598321b21348913d66c44578f9a 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 231 298 7.3E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BAMF_1388 cebcb598321b21348913d66c44578f9a 323 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3754 3c831e0957fdd0e2da8fb7b7aac0e7c5 329 Pfam PF14390 Putative PD-(D/E)XK family member, (DUF4420) 15 310 4.9E-51 T 12-10-2018 IPR025534 Putative PD-(D/E)XK family member (DUF4420) BAMF_0148 1b92ebeab9fcca8f7127454fa80e81e2 247 Pfam PF01416 tRNA pseudouridine synthase 144 246 1.1E-32 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_0148 1b92ebeab9fcca8f7127454fa80e81e2 247 Pfam PF01416 tRNA pseudouridine synthase 8 104 5.7E-8 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_0148 1b92ebeab9fcca8f7127454fa80e81e2 247 Gene3D G3DSA:3.30.70.660 107 244 8.8E-51 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 BAMF_0148 1b92ebeab9fcca8f7127454fa80e81e2 247 SUPERFAMILY SSF55120 1 247 4.32E-87 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_0148 1b92ebeab9fcca8f7127454fa80e81e2 247 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 245 36.341 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_0148 1b92ebeab9fcca8f7127454fa80e81e2 247 PIRSF PIRSF001430 1 247 1.5E-83 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_0148 1b92ebeab9fcca8f7127454fa80e81e2 247 Gene3D G3DSA:3.30.70.580 1 106 1.0E-32 T 12-10-2018 BAMF_0148 1b92ebeab9fcca8f7127454fa80e81e2 247 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 240 8.4E-74 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BAMF_1204 39407ce9d193d1a3edc6e94138ce89ed 63 Pfam PF10815 ComZ 4 58 6.1E-33 T 12-10-2018 IPR024558 ComZ BAMF_1204 39407ce9d193d1a3edc6e94138ce89ed 63 ProDom PD027277 REPRESSOR COMZ COMG OPERON TRANSCRIPTION POSSIBLE COMPETENCE PROTEIN-RELATED BH2888 REGULATION 3 57 5.0E-22 T 12-10-2018 IPR024558 ComZ BAMF_0276 7d689304dc1fba929c89edbaeac426e0 272 Pfam PF06271 RDD family 147 258 8.9E-11 T 12-10-2018 IPR010432 RDD BAMF_0276 7d689304dc1fba929c89edbaeac426e0 272 Pfam PF06271 RDD family 3 123 8.7E-16 T 12-10-2018 IPR010432 RDD BAMF_2537 e958b76870fe4111de2ea313d087bad4 93 Pfam PF10750 Protein of unknown function (DUF2536) 27 91 1.8E-32 T 12-10-2018 IPR019686 Protein of unknown function DUF2536 BAMF_3151 88950fa01a682e4697c5a24d47f7c9b2 243 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 128 240 1.5E-34 T 12-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF BAMF_3151 88950fa01a682e4697c5a24d47f7c9b2 243 PIRSF PIRSF031509 1 243 1.4E-61 T 12-10-2018 IPR016975 Cell wall-active antibiotic response protein GO:0016021 BAMF_1234 890a3b87cb351c11b4f42dfbe4ff6004 211 SMART SM00954 45 165 3.9E-40 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 BAMF_1234 890a3b87cb351c11b4f42dfbe4ff6004 211 SUPERFAMILY SSF81301 5 198 9.81E-59 T 12-10-2018 BAMF_1234 890a3b87cb351c11b4f42dfbe4ff6004 211 Gene3D G3DSA:1.10.287.860 148 211 1.0E-29 T 12-10-2018 BAMF_1234 890a3b87cb351c11b4f42dfbe4ff6004 211 Gene3D G3DSA:3.30.460.10 1 147 1.0E-57 T 12-10-2018 BAMF_1234 890a3b87cb351c11b4f42dfbe4ff6004 211 Pfam PF04607 Region found in RelA / SpoT proteins 45 163 7.7E-37 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 BAMF_0621 a3227b7314cc982dab2a6d44e32a9476 69 Pfam PF14169 Cold-inducible protein YdjO 2 59 5.6E-26 T 12-10-2018 IPR025916 Cold-inducible protein YdjO BAMF_3402 520caae9559922aeac35d9e52b7037a5 213 Pfam PF02397 Bacterial sugar transferase 28 206 2.0E-66 T 12-10-2018 IPR003362 Bacterial sugar transferase BAMF_3402 520caae9559922aeac35d9e52b7037a5 213 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 23 213 1.2E-92 T 12-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase BAMF_3166 0b16fea06d6aac37b1cc5bae4345ac33 51 Pfam PF12841 YvrJ protein family 12 46 1.7E-16 T 12-10-2018 IPR024419 Protein of unknown function YvrJ BAMF_3012 e38274f1c2986204d9b5612c87ac6e54 234 SUPERFAMILY SSF52540 2 216 5.22E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3012 e38274f1c2986204d9b5612c87ac6e54 234 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BAMF_3012 e38274f1c2986204d9b5612c87ac6e54 234 SMART SM00382 26 209 2.3E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BAMF_3012 e38274f1c2986204d9b5612c87ac6e54 234 Pfam PF00005 ABC transporter 17 161 2.6E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BAMF_3012 e38274f1c2986204d9b5612c87ac6e54 234 Gene3D G3DSA:3.40.50.300 1 233 1.6E-60 T 12-10-2018 BAMF_0701 3f68e37a2f393acdc120baf2a4017db4 312 Pfam PF03407 Nucleotide-diphospho-sugar transferase 33 171 1.0E-4 T 12-10-2018 IPR005069 Nucleotide-diphospho-sugar transferase BAMF_0701 3f68e37a2f393acdc120baf2a4017db4 312 SUPERFAMILY SSF53448 4 286 9.28E-22 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0416 b218575127d333909428dc5a483b1d50 102 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 83 97 1.7E-4 T 12-10-2018 IPR019626 Stress-induced protein, KGG, repeat BAMF_0416 b218575127d333909428dc5a483b1d50 102 Pfam PF00477 Small hydrophilic plant seed protein 10 63 3.5E-7 T 12-10-2018 IPR038956 Late embryogenesis abundant protein, LEA_5 subgroup BAMF_0627 9238e55c72813a7c28acc58066c69837 735 SUPERFAMILY SSF54001 407 563 1.07E-46 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BAMF_0627 9238e55c72813a7c28acc58066c69837 735 SMART SM00460 476 551 5.2E-26 T 12-10-2018 IPR002931 Transglutaminase-like BAMF_0627 9238e55c72813a7c28acc58066c69837 735 Pfam PF01841 Transglutaminase-like superfamily 426 549 4.8E-28 T 12-10-2018 IPR002931 Transglutaminase-like BAMF_0627 9238e55c72813a7c28acc58066c69837 735 Pfam PF13559 Domain of unknown function (DUF4129) 663 729 4.3E-7 T 12-10-2018 IPR025403 Domain of unknown function DUF4129 BAMF_0627 9238e55c72813a7c28acc58066c69837 735 Gene3D G3DSA:3.10.620.30 383 565 1.1E-23 T 12-10-2018 BAMF_0355 d635cb9c2866cec1af4c9397af516060 95 SUPERFAMILY SSF54909 1 87 5.37E-28 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BAMF_0355 d635cb9c2866cec1af4c9397af516060 95 Gene3D G3DSA:3.30.70.100 1 94 4.7E-28 T 12-10-2018 BAMF_0355 d635cb9c2866cec1af4c9397af516060 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 4.2E-20 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain BAMF_1957 debc5311945d631f965e72e2b4883997 101 Pfam PF06103 Bacterial protein of unknown function (DUF948) 7 93 3.6E-8 T 12-10-2018 IPR009293 Uncharacterised protein family UPF0478 BAMF_2158 c81d395438ebb42dc188257ef0e13fd1 148 Pfam PF10673 Protein of unknown function (DUF2487) 9 145 4.1E-40 T 12-10-2018 IPR019615 Protein of unknown function DUF2487 BAMF_1489 5d7b2d08eb6a1a4b9fbd6ee6d27a0e04 147 SUPERFAMILY SSF54631 13 139 2.12E-28 T 12-10-2018 BAMF_1489 5d7b2d08eb6a1a4b9fbd6ee6d27a0e04 147 Gene3D G3DSA:3.10.580.10 1 147 7.3E-61 T 12-10-2018 BAMF_0253 610cacf697386c6f53c02ce0a731a687 373 Gene3D G3DSA:1.25.40.10 1 372 4.2E-110 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_0253 610cacf697386c6f53c02ce0a731a687 373 SUPERFAMILY SSF48452 132 278 6.33E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_0253 610cacf697386c6f53c02ce0a731a687 373 Pfam PF13424 Tetratricopeptide repeat 187 251 3.1E-11 T 12-10-2018 BAMF_0253 610cacf697386c6f53c02ce0a731a687 373 SMART SM00028 180 213 53.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0253 610cacf697386c6f53c02ce0a731a687 373 SMART SM00028 220 253 9.5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0253 610cacf697386c6f53c02ce0a731a687 373 SMART SM00028 139 172 420.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0253 610cacf697386c6f53c02ce0a731a687 373 SMART SM00028 99 132 18.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0253 610cacf697386c6f53c02ce0a731a687 373 SMART SM00028 259 292 86.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BAMF_0980 b5040cae73278808a60877a90636079f 329 Gene3D G3DSA:1.10.8.450 245 278 2.5E-91 T 12-10-2018 BAMF_0980 b5040cae73278808a60877a90636079f 329 Gene3D G3DSA:3.40.190.10 33 308 2.5E-91 T 12-10-2018 BAMF_0980 b5040cae73278808a60877a90636079f 329 Pfam PF09084 NMT1/THI5 like 42 253 1.5E-23 T 12-10-2018 IPR015168 SsuA/THI5-like BAMF_0980 b5040cae73278808a60877a90636079f 329 SUPERFAMILY SSF53850 31 255 7.44E-47 T 12-10-2018 BAMF_0980 b5040cae73278808a60877a90636079f 329 SMART SM00062 32 267 1.0E-31 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BAMF_0980 b5040cae73278808a60877a90636079f 329 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 33 319 4.7E-106 T 12-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 BAMF_0980 b5040cae73278808a60877a90636079f 329 Gene3D G3DSA:3.40.190.10 113 212 2.5E-91 T 12-10-2018 BAMF_2265 bc52bdeeb71af3383f06785447dccdf7 322 SUPERFAMILY SSF81301 156 317 2.81E-55 T 12-10-2018 BAMF_2265 bc52bdeeb71af3383f06785447dccdf7 322 Gene3D G3DSA:3.40.630.30 5 148 2.4E-17 T 12-10-2018 BAMF_2265 bc52bdeeb71af3383f06785447dccdf7 322 Gene3D G3DSA:3.30.460.10 151 319 9.8E-58 T 12-10-2018 BAMF_2265 bc52bdeeb71af3383f06785447dccdf7 322 SUPERFAMILY SSF55729 40 138 3.67E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_2265 bc52bdeeb71af3383f06785447dccdf7 322 Pfam PF13673 Acetyltransferase (GNAT) domain 44 142 1.5E-15 T 12-10-2018 IPR000182 GNAT domain BAMF_2265 bc52bdeeb71af3383f06785447dccdf7 322 Pfam PF04229 GrpB protein 154 312 1.5E-54 T 12-10-2018 IPR007344 GrpB/Dephospho-CoA kinase BAMF_3696 4dfa3f61471844ff1ef319be0e6cb66a 298 Pfam PF01497 Periplasmic binding protein 37 274 5.8E-31 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BAMF_3696 4dfa3f61471844ff1ef319be0e6cb66a 298 Gene3D G3DSA:3.40.50.1980 22 137 9.6E-18 T 12-10-2018 BAMF_3696 4dfa3f61471844ff1ef319be0e6cb66a 298 SUPERFAMILY SSF53807 34 282 1.53E-46 T 12-10-2018 BAMF_3696 4dfa3f61471844ff1ef319be0e6cb66a 298 Gene3D G3DSA:3.40.50.1980 138 298 6.5E-39 T 12-10-2018 BAMF_1813 a5cc13ff195811a0745d9a3f8283851e 421 Pfam PF06838 Methionine gamma-lyase 12 415 1.0E-210 T 12-10-2018 IPR009651 Putative methionine gamma-lyase BAMF_1813 a5cc13ff195811a0745d9a3f8283851e 421 Gene3D G3DSA:3.40.640.10 58 272 3.5E-182 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_1813 a5cc13ff195811a0745d9a3f8283851e 421 Gene3D G3DSA:3.90.1150.60 17 412 3.5E-182 T 12-10-2018 BAMF_1813 a5cc13ff195811a0745d9a3f8283851e 421 SUPERFAMILY SSF53383 55 399 1.21E-50 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_0414 26ea3c861a7181bd2c16844ac64f7e04 116 SUPERFAMILY SSF103481 2 98 4.32E-18 T 12-10-2018 BAMF_0414 26ea3c861a7181bd2c16844ac64f7e04 116 Pfam PF00893 Small Multidrug Resistance protein 1 88 1.3E-24 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BAMF_0414 26ea3c861a7181bd2c16844ac64f7e04 116 Gene3D G3DSA:1.10.3730.20 1 104 1.3E-32 T 12-10-2018 BAMF_1431 fa121cb9ae5958fe4722be4204ac35f6 450 Pfam PF02386 Cation transport protein 23 428 4.8E-65 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 BAMF_2916 f3eb7619ee35b5f58ec7f647fcdaa4f5 284 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 17 276 5.7E-102 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BAMF_2916 f3eb7619ee35b5f58ec7f647fcdaa4f5 284 Pfam PF02673 Bacitracin resistance protein BacA 17 278 1.2E-84 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BAMF_2916 f3eb7619ee35b5f58ec7f647fcdaa4f5 284 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 12 283 18.214 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BAMF_1346 6ed53cd735da278681f7a0dbd063f453 118 Gene3D G3DSA:2.40.10.370 1 118 7.6E-48 T 12-10-2018 IPR038667 XkdH-like superfamily BAMF_1346 6ed53cd735da278681f7a0dbd063f453 118 ProDom PD031312 YQBH LIN1274 PHAGE XKDH PHAGE-LIKE PBSX RELATED ELEMENT 1 118 3.0E-40 T 12-10-2018 IPR024556 Protein of unknown function DUF3599 BAMF_1346 6ed53cd735da278681f7a0dbd063f453 118 Pfam PF12206 Domain of unknown function (DUF3599) 1 115 7.9E-46 T 12-10-2018 IPR024556 Protein of unknown function DUF3599 BAMF_1638 15f02c73376018b44a3c60cf7a6a44fc 291 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 291 3.0E-119 T 12-10-2018 IPR005229 Conserved hypothetical protein CHP00255 BAMF_1638 15f02c73376018b44a3c60cf7a6a44fc 291 Pfam PF08340 Domain of unknown function (DUF1732) 208 291 6.8E-38 T 12-10-2018 IPR013551 Domain of unknown function DUF1732 BAMF_1638 15f02c73376018b44a3c60cf7a6a44fc 291 Pfam PF03755 YicC-like family, N-terminal region 2 156 3.3E-36 T 12-10-2018 IPR013527 YicC-like, N-terminal BAMF_0017 55db263e1554c1f9dec984e9cb6b93d5 426 SUPERFAMILY SSF51445 124 422 1.76E-45 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_0017 55db263e1554c1f9dec984e9cb6b93d5 426 SUPERFAMILY SSF54106 46 91 2.62E-9 T 12-10-2018 BAMF_0017 55db263e1554c1f9dec984e9cb6b93d5 426 SMART SM00257 1 42 1.2E-11 T 12-10-2018 IPR018392 LysM domain BAMF_0017 55db263e1554c1f9dec984e9cb6b93d5 426 SMART SM00257 47 91 1.9E-12 T 12-10-2018 IPR018392 LysM domain BAMF_0017 55db263e1554c1f9dec984e9cb6b93d5 426 Gene3D G3DSA:3.20.20.80 126 411 1.2E-105 T 12-10-2018 BAMF_0017 55db263e1554c1f9dec984e9cb6b93d5 426 SUPERFAMILY SSF54106 1 42 2.09E-9 T 12-10-2018 BAMF_0017 55db263e1554c1f9dec984e9cb6b93d5 426 Gene3D G3DSA:3.10.50.10 319 377 1.2E-105 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily BAMF_0017 55db263e1554c1f9dec984e9cb6b93d5 426 SMART SM00636 99 406 2.9E-33 T 12-10-2018 IPR011583 Chitinase II GO:0008061 BAMF_0017 55db263e1554c1f9dec984e9cb6b93d5 426 Gene3D G3DSA:3.10.350.10 1 45 4.0E-14 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_0017 55db263e1554c1f9dec984e9cb6b93d5 426 Gene3D G3DSA:3.10.350.10 46 104 1.2E-13 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_0017 55db263e1554c1f9dec984e9cb6b93d5 426 Pfam PF00704 Glycosyl hydrolases family 18 147 404 6.2E-26 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 BAMF_0017 55db263e1554c1f9dec984e9cb6b93d5 426 Pfam PF01476 LysM domain 48 91 3.8E-11 T 12-10-2018 IPR018392 LysM domain BAMF_0017 55db263e1554c1f9dec984e9cb6b93d5 426 Pfam PF01476 LysM domain 1 42 1.3E-13 T 12-10-2018 IPR018392 LysM domain BAMF_0818 e54f004402fd630e4504f4c6e9a4786b 75 Pfam PF13630 SdpI/YhfL protein family 1 58 7.4E-7 T 12-10-2018 IPR025962 SdpI/YhfL protein family BAMF_3647 f282691c0c5c250129fc13caf2c9951c 395 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 343 367 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_3647 f282691c0c5c250129fc13caf2c9951c 395 Pfam PF01098 Cell cycle protein 11 385 3.8E-102 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_0779 ab02b2b7e1d07c29a2cc47988a27edf1 327 PIRSF PIRSF006621 1 325 3.2E-82 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BAMF_0779 ab02b2b7e1d07c29a2cc47988a27edf1 327 SUPERFAMILY SSF51395 13 317 1.14E-59 T 12-10-2018 BAMF_0779 ab02b2b7e1d07c29a2cc47988a27edf1 327 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 99 117 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BAMF_0779 ab02b2b7e1d07c29a2cc47988a27edf1 327 Pfam PF01207 Dihydrouridine synthase (Dus) 15 317 3.7E-47 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BAMF_0779 ab02b2b7e1d07c29a2cc47988a27edf1 327 Gene3D G3DSA:3.20.20.70 13 247 6.1E-60 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_0625 662215a0f27c3ab39009a8abd07dedea 320 Gene3D G3DSA:1.10.8.300 202 309 4.0E-34 T 12-10-2018 BAMF_0625 662215a0f27c3ab39009a8abd07dedea 320 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 41 171 3.2E-65 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 BAMF_0625 662215a0f27c3ab39009a8abd07dedea 320 SUPERFAMILY SSF52540 8 285 6.74E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_0625 662215a0f27c3ab39009a8abd07dedea 320 Gene3D G3DSA:3.40.50.300 22 188 3.0E-47 T 12-10-2018 BAMF_0625 662215a0f27c3ab39009a8abd07dedea 320 PIRSF PIRSF002849 2 315 1.3E-132 T 12-10-2018 BAMF_2621 fa46b97675f4cb76bbd3d896b730a646 260 Gene3D G3DSA:3.40.50.10090 3 133 7.7E-26 T 12-10-2018 BAMF_2621 fa46b97675f4cb76bbd3d896b730a646 260 Gene3D G3DSA:3.40.50.10090 151 258 2.0E-20 T 12-10-2018 BAMF_2621 fa46b97675f4cb76bbd3d896b730a646 260 SUPERFAMILY SSF69618 9 255 1.7E-59 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_2621 fa46b97675f4cb76bbd3d896b730a646 260 Pfam PF02602 Uroporphyrinogen-III synthase HemD 24 249 1.8E-47 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BAMF_1555 1082e3000b9aae3d1b8d54073495ead8 442 Gene3D G3DSA:3.40.50.1010 2 149 8.2E-22 T 12-10-2018 BAMF_1555 1082e3000b9aae3d1b8d54073495ead8 442 Gene3D G3DSA:3.40.50.300 231 441 3.4E-69 T 12-10-2018 BAMF_1555 1082e3000b9aae3d1b8d54073495ead8 442 SMART SM00670 3 135 4.3E-26 T 12-10-2018 IPR002716 PIN domain BAMF_1555 1082e3000b9aae3d1b8d54073495ead8 442 Pfam PF02562 PhoH-like protein 233 436 1.8E-53 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 BAMF_1555 1082e3000b9aae3d1b8d54073495ead8 442 SUPERFAMILY SSF52540 28 422 3.56E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1555 1082e3000b9aae3d1b8d54073495ead8 442 Pfam PF13638 PIN domain 5 147 1.1E-33 T 12-10-2018 IPR002716 PIN domain BAMF_3856 b88a6aef19d7ad5f691cf840f9a28a5e 279 Gene3D G3DSA:3.10.450.660 49 272 6.0E-69 T 12-10-2018 BAMF_3856 b88a6aef19d7ad5f691cf840f9a28a5e 279 Gene3D G3DSA:3.30.310.160 70 193 6.0E-69 T 12-10-2018 BAMF_3856 b88a6aef19d7ad5f691cf840f9a28a5e 279 Pfam PF09648 YycH protein 35 267 2.2E-61 T 12-10-2018 IPR018604 Regulatory protein YycH-like GO:0016021 BAMF_1344 0db75cdde63effc1184abbcec51474ba 280 Pfam PF14550 Putative phage serine protease XkdF 40 157 2.8E-45 T 12-10-2018 IPR027924 Phage-like element PBSX protein, XkdF BAMF_0974 aeed1568522fcd806103a6595dd66d70 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 295 1.2E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_0974 aeed1568522fcd806103a6595dd66d70 301 Gene3D G3DSA:1.10.3720.10 74 297 5.4E-22 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_0974 aeed1568522fcd806103a6595dd66d70 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 10 62 3.4E-10 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BAMF_0974 aeed1568522fcd806103a6595dd66d70 301 SUPERFAMILY SSF161098 81 266 1.7E-23 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2090 8eb1f4da8980c02d92549ae99440665e 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 12-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 BAMF_2090 8eb1f4da8980c02d92549ae99440665e 160 PIRSF PIRSF000303 1 160 3.3E-68 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BAMF_2090 8eb1f4da8980c02d92549ae99440665e 160 PRINTS PR01011 Glutathione peroxidase family signature 21 38 1.4E-20 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BAMF_2090 8eb1f4da8980c02d92549ae99440665e 160 PRINTS PR01011 Glutathione peroxidase family signature 122 131 1.4E-20 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BAMF_2090 8eb1f4da8980c02d92549ae99440665e 160 PRINTS PR01011 Glutathione peroxidase family signature 56 72 1.4E-20 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BAMF_2090 8eb1f4da8980c02d92549ae99440665e 160 Gene3D G3DSA:3.40.30.10 1 160 6.4E-71 T 12-10-2018 BAMF_2090 8eb1f4da8980c02d92549ae99440665e 160 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 12-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 BAMF_2090 8eb1f4da8980c02d92549ae99440665e 160 Pfam PF00255 Glutathione peroxidase 3 109 9.4E-43 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BAMF_2090 8eb1f4da8980c02d92549ae99440665e 160 SUPERFAMILY SSF52833 1 158 1.08E-60 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_0996 df5d75739d20a791ba1e02bfcbe120b3 154 SUPERFAMILY SSF46785 12 145 6.95E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0996 df5d75739d20a791ba1e02bfcbe120b3 154 SMART SM00347 31 131 2.5E-22 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0996 df5d75739d20a791ba1e02bfcbe120b3 154 Pfam PF01047 MarR family 38 96 6.6E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_0996 df5d75739d20a791ba1e02bfcbe120b3 154 Gene3D G3DSA:1.10.10.10 2 149 5.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3249 1102d1796b80081fdf7053ce79aa2b74 376 PIRSF PIRSF000390 1 371 1.7E-114 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BAMF_3249 1102d1796b80081fdf7053ce79aa2b74 376 SUPERFAMILY SSF53383 2 368 1.88E-120 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_3249 1102d1796b80081fdf7053ce79aa2b74 376 Gene3D G3DSA:3.90.1150.10 244 370 2.3E-33 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_3249 1102d1796b80081fdf7053ce79aa2b74 376 Gene3D G3DSA:3.40.640.10 1 242 2.1E-102 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_3249 1102d1796b80081fdf7053ce79aa2b74 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 2 364 7.3E-130 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BAMF_1124 43b54aacff8cc29bf024c7f7fbec1aa8 185 Gene3D G3DSA:1.10.1760.20 1 179 1.1E-42 T 12-10-2018 BAMF_1124 43b54aacff8cc29bf024c7f7fbec1aa8 185 PIRSF PIRSF016661 1 180 2.0E-38 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 BAMF_1124 43b54aacff8cc29bf024c7f7fbec1aa8 185 Pfam PF02632 BioY family 29 172 7.1E-31 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 BAMF_2812 9e7d1527a423f29d72b2dda44edc5002 162 Gene3D G3DSA:3.40.630.30 3 162 1.3E-40 T 12-10-2018 BAMF_2812 9e7d1527a423f29d72b2dda44edc5002 162 SUPERFAMILY SSF55729 4 150 3.21E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_2812 9e7d1527a423f29d72b2dda44edc5002 162 Pfam PF00583 Acetyltransferase (GNAT) family 44 138 1.0E-15 T 12-10-2018 IPR000182 GNAT domain BAMF_2996 fd66d54ddcda816d0158a328a1652b54 261 Gene3D G3DSA:3.40.50.720 2 259 1.6E-76 T 12-10-2018 BAMF_2996 fd66d54ddcda816d0158a328a1652b54 261 Pfam PF00106 short chain dehydrogenase 9 202 2.6E-58 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2996 fd66d54ddcda816d0158a328a1652b54 261 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 260 1.5E-115 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BAMF_2996 fd66d54ddcda816d0158a328a1652b54 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 172 195 1.9E-61 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BAMF_2996 fd66d54ddcda816d0158a328a1652b54 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 211 230 1.9E-61 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BAMF_2996 fd66d54ddcda816d0158a328a1652b54 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 107 127 1.9E-61 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BAMF_2996 fd66d54ddcda816d0158a328a1652b54 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 237 256 1.9E-61 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BAMF_2996 fd66d54ddcda816d0158a328a1652b54 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 87 104 1.9E-61 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BAMF_2996 fd66d54ddcda816d0158a328a1652b54 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 1.9E-61 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BAMF_2996 fd66d54ddcda816d0158a328a1652b54 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2996 fd66d54ddcda816d0158a328a1652b54 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2996 fd66d54ddcda816d0158a328a1652b54 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BAMF_2996 fd66d54ddcda816d0158a328a1652b54 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BAMF_2996 fd66d54ddcda816d0158a328a1652b54 261 SUPERFAMILY SSF51735 7 259 1.54E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_2302 88788fe78b35160ce8d54189db52a789 330 SUPERFAMILY SSF52518 8 330 4.99E-105 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_2302 88788fe78b35160ce8d54189db52a789 330 Pfam PF00676 Dehydrogenase E1 component 20 320 1.7E-112 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BAMF_2302 88788fe78b35160ce8d54189db52a789 330 Gene3D G3DSA:3.40.50.970 1 330 7.6E-123 T 12-10-2018 BAMF_0480 eb42acfe6c5edf1a52758440cf3235e3 134 Pfam PF13411 MerR HTH family regulatory protein 1 66 1.1E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_0480 eb42acfe6c5edf1a52758440cf3235e3 134 Gene3D G3DSA:1.10.1660.10 1 131 2.6E-32 T 12-10-2018 BAMF_0480 eb42acfe6c5edf1a52758440cf3235e3 134 SMART SM00422 1 70 2.1E-21 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_0480 eb42acfe6c5edf1a52758440cf3235e3 134 SUPERFAMILY SSF46955 1 119 3.08E-28 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BAMF_0480 eb42acfe6c5edf1a52758440cf3235e3 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.2E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_0480 eb42acfe6c5edf1a52758440cf3235e3 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.2E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_0480 eb42acfe6c5edf1a52758440cf3235e3 134 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_3539 461132199fbc1dc7576590986d5b9f36 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 2.9E-20 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BAMF_3539 461132199fbc1dc7576590986d5b9f36 127 Gene3D G3DSA:3.10.180.10 7 126 1.1E-32 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_3539 461132199fbc1dc7576590986d5b9f36 127 SUPERFAMILY SSF54593 1 126 3.62E-31 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_3021 5c7ce27cbc8e30a71665cb74aaac34f5 406 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 194 404 1.7E-75 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 BAMF_3021 5c7ce27cbc8e30a71665cb74aaac34f5 406 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 3.9E-25 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 BAMF_3021 5c7ce27cbc8e30a71665cb74aaac34f5 406 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 6 404 1.4E-144 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 BAMF_1365 bdd125e2492154890401d1ebea85506b 65 TIGRFAM TIGR01669 phage_XkdX: phage uncharacterized protein, XkdX family 14 57 3.2E-13 T 12-10-2018 IPR010022 Protein of unknown function XkdX BAMF_1365 bdd125e2492154890401d1ebea85506b 65 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 20 57 2.1E-10 T 12-10-2018 IPR010022 Protein of unknown function XkdX BAMF_2319 658185bbfd2f47befcd064c57cf0bf58 211 Pfam PF02659 Putative manganese efflux pump 3 82 1.5E-8 T 12-10-2018 IPR003810 Putative manganese efflux pump BAMF_2319 658185bbfd2f47befcd064c57cf0bf58 211 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 6 208 5.1E-57 T 12-10-2018 IPR014205 Sporulation protein YtaF BAMF_1602 64431582b40248867512b3df6f28f4a2 309 Pfam PF03419 Sporulation factor SpoIIGA 3 299 1.3E-83 T 12-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 BAMF_1602 64431582b40248867512b3df6f28f4a2 309 TIGRFAM TIGR02854 spore_II_GA: sigma-E processing peptidase SpoIIGA 2 300 1.5E-88 T 12-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 BAMF_1602 64431582b40248867512b3df6f28f4a2 309 PIRSF PIRSF018571 1 302 9.0E-98 T 12-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 BAMF_3294 a0f8eee76935d9832ddb60d80b9762b9 380 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.1E-18 T 12-10-2018 BAMF_3294 a0f8eee76935d9832ddb60d80b9762b9 380 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 309 325 1.1E-18 T 12-10-2018 BAMF_3294 a0f8eee76935d9832ddb60d80b9762b9 380 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 1.1E-18 T 12-10-2018 BAMF_3294 a0f8eee76935d9832ddb60d80b9762b9 380 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 309 1.1E-18 T 12-10-2018 BAMF_3294 a0f8eee76935d9832ddb60d80b9762b9 380 Gene3D G3DSA:3.50.50.60 3 376 1.4E-116 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_3294 a0f8eee76935d9832ddb60d80b9762b9 380 Pfam PF01494 FAD binding domain 8 353 1.4E-19 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 BAMF_3294 a0f8eee76935d9832ddb60d80b9762b9 380 SUPERFAMILY SSF51905 6 367 1.73E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BAMF_0720 2da1ba1eccba4f641bf122b2761ee24e 2083 Pfam PF01391 Collagen triple helix repeat (20 copies) 1893 1948 2.8E-7 T 12-10-2018 IPR008160 Collagen triple helix repeat BAMF_3665 786546ee8bcdcce079c25fe1989b8cdf 482 Pfam PF03239 Iron permease FTR1 family 93 396 8.6E-61 T 12-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 BAMF_0076 76dabe5b33061a14a9a8de378cff9388 283 Gene3D G3DSA:3.20.10.10 127 277 3.7E-39 T 12-10-2018 BAMF_0076 76dabe5b33061a14a9a8de378cff9388 283 ProSitePatterns PS00770 Aminotransferases class-IV signature. 180 209 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 BAMF_0076 76dabe5b33061a14a9a8de378cff9388 283 Gene3D G3DSA:3.30.470.10 1 118 4.6E-30 T 12-10-2018 BAMF_0076 76dabe5b33061a14a9a8de378cff9388 283 Pfam PF01063 Amino-transferase class IV 29 254 6.1E-50 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BAMF_0076 76dabe5b33061a14a9a8de378cff9388 283 SUPERFAMILY SSF56752 2 275 8.5E-68 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 501 3.5E-148 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 Gene3D G3DSA:1.20.210.10 29 562 2.5E-201 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 SUPERFAMILY SSF81442 44 556 5.89E-177 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 276 330 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 TIGRFAM TIGR02882 QoxB: cytochrome aa3 quinol oxidase, subunit I 5 646 0.0 T 12-10-2018 IPR014233 Quinol oxidase subunit I GO:0005507|GO:0016021|GO:0016682|GO:0020037|GO:0055114 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 274 295 7.5E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 457 478 7.5E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 320 335 7.5E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 344 365 7.5E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 379 397 7.5E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 174 7.5E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 120 144 7.5E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 194 212 7.5E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 407 426 7.5E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 7.5E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 116 7.5E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3652 d82f997218dd6a135adf68472db4c218 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 223 242 7.5E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_0364 aa18a332a018cd1e0a136cc17347532c 198 SUPERFAMILY SSF160387 90 196 5.23E-21 T 12-10-2018 BAMF_0364 aa18a332a018cd1e0a136cc17347532c 198 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 32 46 4.9E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_0364 aa18a332a018cd1e0a136cc17347532c 198 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 46 64 4.9E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_0364 aa18a332a018cd1e0a136cc17347532c 198 Pfam PF08220 DeoR-like helix-turn-helix domain 14 66 9.4E-14 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_0364 aa18a332a018cd1e0a136cc17347532c 198 Gene3D G3DSA:1.10.10.10 1 67 7.9E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_0364 aa18a332a018cd1e0a136cc17347532c 198 SMART SM00420 14 66 1.9E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BAMF_0364 aa18a332a018cd1e0a136cc17347532c 198 SUPERFAMILY SSF46785 14 69 1.03E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1945 4d6ea19452b7c4efd0cc0815c6ba468d 76 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 2 50 2.7E-12 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 BAMF_1945 4d6ea19452b7c4efd0cc0815c6ba468d 76 Pfam PF12728 Helix-turn-helix domain 2 50 1.3E-7 T 12-10-2018 BAMF_2950 3f8becd9b3ffedf20f0fb48af399161e 137 Pfam PF04134 Protein of unknown function, DUF393 11 120 2.3E-37 T 12-10-2018 IPR007263 Protein of unknown function DUF393 BAMF_3057 d1b530b8ba9d2c0ce024bff08ead1376 308 Pfam PF13411 MerR HTH family regulatory protein 1 67 5.8E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_3057 d1b530b8ba9d2c0ce024bff08ead1376 308 SUPERFAMILY SSF46955 1 111 2.82E-23 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BAMF_3057 d1b530b8ba9d2c0ce024bff08ead1376 308 Gene3D G3DSA:1.10.1660.10 1 122 4.0E-25 T 12-10-2018 BAMF_3057 d1b530b8ba9d2c0ce024bff08ead1376 308 SMART SM00422 1 70 1.8E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_0688 d6f060c4bc0863c9c34126b44e19fc3b 288 Pfam PF01740 STAS domain 174 270 5.9E-11 T 12-10-2018 IPR002645 STAS domain BAMF_0688 d6f060c4bc0863c9c34126b44e19fc3b 288 SUPERFAMILY SSF52091 169 276 6.28E-16 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_0688 d6f060c4bc0863c9c34126b44e19fc3b 288 Gene3D G3DSA:3.30.750.24 164 280 1.7E-33 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_1613 18349101a8318981f94c055cec34ab0a 164 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 1.5E-15 T 12-10-2018 IPR019933 DivIVA domain BAMF_1613 18349101a8318981f94c055cec34ab0a 164 Pfam PF05103 DivIVA protein 3 133 3.5E-48 T 12-10-2018 IPR007793 DivIVA family BAMF_0999 0824cf566a787f948b8b1515bdefac00 177 Gene3D G3DSA:3.40.50.360 1 177 8.0E-48 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_0999 0824cf566a787f948b8b1515bdefac00 177 Pfam PF03358 NADPH-dependent FMN reductase 43 121 2.4E-11 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BAMF_0999 0824cf566a787f948b8b1515bdefac00 177 SUPERFAMILY SSF52218 1 169 3.54E-44 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BAMF_0418 9f4a21b2e600f95f3b9722add6d6e6f7 119 Pfam PF16291 Domain of unknown function (DUF4937 2 92 1.4E-30 T 12-10-2018 IPR032555 Domain of unknown function DUF4937 BAMF_0418 9f4a21b2e600f95f3b9722add6d6e6f7 119 SUPERFAMILY SSF54909 1 93 8.94E-12 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BAMF_3121 9fa0a442728b67ab757bae70822033a9 118 SUPERFAMILY SSF52833 4 117 1.34E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_3121 9fa0a442728b67ab757bae70822033a9 118 Gene3D G3DSA:3.40.30.10 1 116 9.9E-46 T 12-10-2018 BAMF_3121 9fa0a442728b67ab757bae70822033a9 118 Pfam PF03960 ArsC family 6 115 1.7E-17 T 12-10-2018 IPR006660 Arsenate reductase-like BAMF_3121 9fa0a442728b67ab757bae70822033a9 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 117 5.3E-34 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR BAMF_1311 9525743805a5ecd5c5384530193aefbd 180 Pfam PF07849 Protein of unknown function (DUF1641) 118 154 1.6E-13 T 12-10-2018 IPR012440 Protein of unknown function DUF1641 BAMF_1671 ead3be531c9eb30159ead8ed60a07464 81 Pfam PF13083 KH domain 7 79 1.2E-22 T 12-10-2018 BAMF_1671 ead3be531c9eb30159ead8ed60a07464 81 Gene3D G3DSA:3.30.300.20 5 67 1.1E-5 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BAMF_1671 ead3be531c9eb30159ead8ed60a07464 81 SUPERFAMILY SSF54814 22 63 6.54E-6 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BAMF_1671 ead3be531c9eb30159ead8ed60a07464 81 Hamap MF_00088 UPF0109 protein . 6 80 21.9 T 12-10-2018 IPR020627 Uncharacterised protein family UPF0109 BAMF_2849 04c6f4ea39214fcef2b7d0881e5c68fd 147 Pfam PF13115 YtkA-like 30 112 1.0E-12 T 12-10-2018 IPR032693 YtkA-like domain BAMF_1289 75440cfab82c74e7bfa7327b1b66424f 93 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 77 5.4E-10 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain BAMF_1289 75440cfab82c74e7bfa7327b1b66424f 93 SUPERFAMILY SSF54909 1 81 1.52E-20 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BAMF_1289 75440cfab82c74e7bfa7327b1b66424f 93 Gene3D G3DSA:3.30.70.100 1 93 2.0E-28 T 12-10-2018 BAMF_0267 67702d3a94b194ba2ce0ddf183213264 362 PIRSF PIRSF026508 1 362 1.2E-130 T 12-10-2018 IPR008863 Toxic anion resistance BAMF_0267 67702d3a94b194ba2ce0ddf183213264 362 Pfam PF05816 Toxic anion resistance protein (TelA) 34 359 2.3E-110 T 12-10-2018 IPR008863 Toxic anion resistance BAMF_2720 842cc773e41756d4c78ec4eeace1060e 127 Pfam PF04186 FxsA cytoplasmic membrane protein 6 113 2.2E-34 T 12-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 BAMF_0541 1bc03ba5a036698e97282820408a670c 403 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 71 125 8.8E-13 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BAMF_0541 1bc03ba5a036698e97282820408a670c 403 Pfam PF14657 Arm DNA-binding domain 17 58 1.5E-10 T 12-10-2018 IPR028259 AP2-like integrase, N-terminal domain BAMF_0541 1bc03ba5a036698e97282820408a670c 403 SUPERFAMILY SSF56349 70 384 1.94E-57 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BAMF_0541 1bc03ba5a036698e97282820408a670c 403 Pfam PF00589 Phage integrase family 184 378 1.8E-21 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BAMF_0541 1bc03ba5a036698e97282820408a670c 403 Gene3D G3DSA:1.10.443.10 183 393 7.6E-42 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BAMF_0541 1bc03ba5a036698e97282820408a670c 403 Gene3D G3DSA:1.10.150.130 71 156 1.2E-23 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal BAMF_1804 65b333c9d6e0cca9ba2a6c25dc3512db 91 Gene3D G3DSA:2.60.40.3150 47 91 7.8E-25 T 12-10-2018 BAMF_1804 65b333c9d6e0cca9ba2a6c25dc3512db 91 Pfam PF14157 YmzC-like protein 33 89 6.0E-19 T 12-10-2018 IPR025448 YmzC-like protein BAMF_0587 9205819f04f3251b2e2e2983ca7a64a4 127 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 11 75 2.2E-6 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component BAMF_3276 8d20aa447d8c5c9bead1629cf66951d8 390 Gene3D G3DSA:3.90.1150.10 253 386 3.8E-37 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BAMF_3276 8d20aa447d8c5c9bead1629cf66951d8 390 Gene3D G3DSA:3.40.640.10 1 251 8.4E-87 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BAMF_3276 8d20aa447d8c5c9bead1629cf66951d8 390 PIRSF PIRSF000390 2 381 8.1E-113 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BAMF_3276 8d20aa447d8c5c9bead1629cf66951d8 390 SUPERFAMILY SSF53383 6 378 6.86E-106 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BAMF_3276 8d20aa447d8c5c9bead1629cf66951d8 390 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 373 7.4E-99 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BAMF_1717 ba9275e9353437c889347df0c46f350d 209 SUPERFAMILY SSF103039 5 206 3.53E-49 T 12-10-2018 IPR028976 CheC-like superfamily BAMF_1717 ba9275e9353437c889347df0c46f350d 209 Gene3D G3DSA:3.40.1550.10 6 207 2.7E-57 T 12-10-2018 IPR028976 CheC-like superfamily BAMF_1717 ba9275e9353437c889347df0c46f350d 209 Pfam PF04509 CheC-like family 10 44 3.0E-13 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 BAMF_1717 ba9275e9353437c889347df0c46f350d 209 Pfam PF04509 CheC-like family 112 147 6.3E-13 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 BAMF_1873 f3ef0547eac23308992439768e70c607 216 SMART SM00857 3 149 9.0E-38 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BAMF_1873 f3ef0547eac23308992439768e70c607 216 Gene3D G3DSA:3.40.50.1390 1 158 5.5E-30 T 12-10-2018 BAMF_1873 f3ef0547eac23308992439768e70c607 216 Pfam PF00239 Resolvase, N terminal domain 3 147 3.6E-28 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BAMF_1873 f3ef0547eac23308992439768e70c607 216 SUPERFAMILY SSF53041 1 149 1.57E-28 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BAMF_2327 184c2ef4923912cc466bc91f6e1e6aa5 426 Gene3D G3DSA:2.30.42.10 135 213 1.7E-16 T 12-10-2018 BAMF_2327 184c2ef4923912cc466bc91f6e1e6aa5 426 SUPERFAMILY SSF50494 347 411 9.93E-7 T 12-10-2018 IPR009003 Peptidase S1, PA clan BAMF_2327 184c2ef4923912cc466bc91f6e1e6aa5 426 Pfam PF05580 SpoIVB peptidase S55 204 412 3.5E-87 T 12-10-2018 IPR008763 Peptidase S55, SpoIVB BAMF_2327 184c2ef4923912cc466bc91f6e1e6aa5 426 SMART SM00228 111 187 1.8E-5 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_2327 184c2ef4923912cc466bc91f6e1e6aa5 426 SUPERFAMILY SSF50156 132 194 4.73E-10 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BAMF_2327 184c2ef4923912cc466bc91f6e1e6aa5 426 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 108 183 1.0E-6 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_2327 184c2ef4923912cc466bc91f6e1e6aa5 426 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 3 417 1.1E-175 T 12-10-2018 IPR014219 Peptidase S55, sporulation stage IV, protein B BAMF_2526 18bdc473c33c0c91a8452f4e4efa9dfc 46 TIGRFAM TIGR02413 Bac_small_yrzI: Bacillus tandem small hypothetical protein 1 45 2.9E-15 T 12-10-2018 IPR012655 Uncharacterised protein YrzI BAMF_2526 18bdc473c33c0c91a8452f4e4efa9dfc 46 Pfam PF09501 Probable sporulation protein (Bac_small_yrzI) 1 44 4.0E-19 T 12-10-2018 IPR012655 Uncharacterised protein YrzI BAMF_1171 9e88a7eaad4fbf98f1b4ca1924d7d23e 254 Pfam PF01810 LysE type translocator 66 249 1.1E-29 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BAMF_3073 e4e528335f5368a92e19f5b8edcd3ece 378 Pfam PF10651 Domain of unknown function (DUF2479) 7 145 9.9E-32 T 12-10-2018 IPR018913 Domain of unknown function DUF2479 BAMF_3073 e4e528335f5368a92e19f5b8edcd3ece 378 Gene3D G3DSA:2.60.40.3350 9 124 1.7E-6 T 12-10-2018 BAMF_3651 c23e5a6c38b47801d07ced8065d8688a 204 SUPERFAMILY SSF81452 21 200 2.22E-52 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3651 c23e5a6c38b47801d07ced8065d8688a 204 Gene3D G3DSA:1.20.120.80 18 201 1.6E-52 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_3651 c23e5a6c38b47801d07ced8065d8688a 204 TIGRFAM TIGR02897 QoxC: cytochrome aa3 quinol oxidase, subunit III 14 201 1.5E-90 T 12-10-2018 IPR014246 Quinol oxidase subunit III GO:0015002|GO:0016021|GO:0042773 BAMF_3651 c23e5a6c38b47801d07ced8065d8688a 204 Pfam PF00510 Cytochrome c oxidase subunit III 25 200 1.7E-14 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BAMF_2846 e6b30da8f1da59dd79a64b3d86deddc5 138 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 15 137 2.0E-32 T 12-10-2018 IPR006480 Bacteriophage holin family BAMF_2846 e6b30da8f1da59dd79a64b3d86deddc5 138 Pfam PF05105 Bacteriophage holin family 22 132 5.4E-25 T 12-10-2018 IPR006480 Bacteriophage holin family BAMF_0424 28b063d49e3a033901559bbe0737089a 349 Pfam PF01594 AI-2E family transporter 18 334 6.4E-57 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like BAMF_1100 efcb414450c7aeee384fc785328d198a 234 Pfam PF12787 EcsC protein family 6 229 1.3E-69 T 12-10-2018 IPR024787 EcsC protein BAMF_1100 efcb414450c7aeee384fc785328d198a 234 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 1 229 1.0E-83 T 12-10-2018 BAMF_2988 832b4390abd21834b54c0e595d09ac9f 409 Gene3D G3DSA:1.10.10.2840 276 409 2.5E-19 T 12-10-2018 BAMF_2988 832b4390abd21834b54c0e595d09ac9f 409 Pfam PF13556 PucR C-terminal helix-turn-helix domain 347 403 4.7E-18 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BAMF_2988 832b4390abd21834b54c0e595d09ac9f 409 Pfam PF06018 CodY GAF-like domain 16 155 4.0E-7 T 12-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 BAMF_3419 ec9abb659ea15862bfe9c1330b5d53ef 368 Gene3D G3DSA:1.20.1740.10 2 365 3.6E-7 T 12-10-2018 BAMF_3419 ec9abb659ea15862bfe9c1330b5d53ef 368 Pfam PF03845 Spore germination protein 7 330 2.1E-92 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BAMF_3419 ec9abb659ea15862bfe9c1330b5d53ef 368 PIRSF PIRSF006060 306 367 12.0 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_3419 ec9abb659ea15862bfe9c1330b5d53ef 368 PIRSF PIRSF006060 1 292 4.2E-12 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_3419 ec9abb659ea15862bfe9c1330b5d53ef 368 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 361 9.1E-69 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BAMF_2478 e54240bfa4f4e58faa32b53c01bad9c6 197 SUPERFAMILY SSF52317 1 186 8.07E-44 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_2478 e54240bfa4f4e58faa32b53c01bad9c6 197 Gene3D G3DSA:3.40.50.880 1 192 4.5E-51 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_2478 e54240bfa4f4e58faa32b53c01bad9c6 197 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 186 1.4E-49 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BAMF_2478 e54240bfa4f4e58faa32b53c01bad9c6 197 Pfam PF00117 Glutamine amidotransferase class-I 5 186 2.3E-42 T 12-10-2018 IPR017926 Glutamine amidotransferase BAMF_2478 e54240bfa4f4e58faa32b53c01bad9c6 197 PRINTS PR00097 Anthranilate synthase component II signature 119 131 5.5E-28 T 12-10-2018 BAMF_2478 e54240bfa4f4e58faa32b53c01bad9c6 197 PRINTS PR00097 Anthranilate synthase component II signature 3 17 5.5E-28 T 12-10-2018 BAMF_2478 e54240bfa4f4e58faa32b53c01bad9c6 197 PRINTS PR00097 Anthranilate synthase component II signature 74 85 5.5E-28 T 12-10-2018 BAMF_2478 e54240bfa4f4e58faa32b53c01bad9c6 197 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.5E-28 T 12-10-2018 BAMF_2478 e54240bfa4f4e58faa32b53c01bad9c6 197 PRINTS PR00097 Anthranilate synthase component II signature 48 57 5.5E-28 T 12-10-2018 BAMF_2478 e54240bfa4f4e58faa32b53c01bad9c6 197 PRINTS PR00097 Anthranilate synthase component II signature 165 178 5.5E-28 T 12-10-2018 BAMF_2478 e54240bfa4f4e58faa32b53c01bad9c6 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 8.7E-13 T 12-10-2018 BAMF_2478 e54240bfa4f4e58faa32b53c01bad9c6 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 48 57 8.7E-13 T 12-10-2018 BAMF_2478 e54240bfa4f4e58faa32b53c01bad9c6 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 8.7E-13 T 12-10-2018 BAMF_1943 8e0e55e0bbc345d57d71ff98b6fd8861 180 Gene3D G3DSA:3.10.450.420 23 180 1.3E-55 T 12-10-2018 BAMF_1943 8e0e55e0bbc345d57d71ff98b6fd8861 180 Pfam PF16800 IseA DL-endopeptidase inhibitor 27 178 1.2E-51 T 12-10-2018 IPR031841 DL-endopeptidase inhibitor IseA BAMF_2742 8eb98d06b3f1e3032edff1f45a64eb5c 146 PIRSF PIRSF021377 1 145 4.2E-62 T 12-10-2018 IPR014229 Sporulation protein YtfJ BAMF_2742 8eb98d06b3f1e3032edff1f45a64eb5c 146 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 31 124 2.3E-29 T 12-10-2018 IPR014229 Sporulation protein YtfJ BAMF_2742 8eb98d06b3f1e3032edff1f45a64eb5c 146 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 3 134 3.4E-59 T 12-10-2018 IPR014229 Sporulation protein YtfJ BAMF_2949 646d49cc4f9939a38141b72582b5f6e7 624 SUPERFAMILY SSF53955 54 265 1.15E-70 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BAMF_2949 646d49cc4f9939a38141b72582b5f6e7 624 Pfam PF00905 Penicillin binding protein transpeptidase domain 350 590 1.9E-27 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BAMF_2949 646d49cc4f9939a38141b72582b5f6e7 624 Gene3D G3DSA:1.10.3810.10 75 270 3.8E-165 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_2949 646d49cc4f9939a38141b72582b5f6e7 624 Pfam PF00912 Transglycosylase 63 238 1.2E-60 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BAMF_2949 646d49cc4f9939a38141b72582b5f6e7 624 SUPERFAMILY SSF56601 221 624 3.82E-95 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_2949 646d49cc4f9939a38141b72582b5f6e7 624 Gene3D G3DSA:3.40.710.10 328 621 3.8E-165 T 12-10-2018 BAMF_2949 646d49cc4f9939a38141b72582b5f6e7 624 Gene3D G3DSA:3.90.1310.20 59 536 3.8E-165 T 12-10-2018 BAMF_0244 4b5bbeb1e26d73a8eb3b4e4c9f7afb25 52 Gene3D G3DSA:3.40.50.1820 20 52 9.4E-6 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_0244 4b5bbeb1e26d73a8eb3b4e4c9f7afb25 52 SUPERFAMILY SSF53474 16 50 5.47E-6 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2855 d8cd1b258470d773323216bb952e5923 346 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 8 335 8.1E-36 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BAMF_2362 9b3eb12f939bb3b1498371f316b07145 264 ProDom PD123329 YQHG BH2818 1 260 4.0E-127 T 12-10-2018 IPR024562 Uncharacterised protein family YqhG BAMF_2362 9b3eb12f939bb3b1498371f316b07145 264 Pfam PF11079 Bacterial protein YqhG of unknown function 1 258 5.2E-121 T 12-10-2018 IPR024562 Uncharacterised protein family YqhG BAMF_1881 53c24c9706e5663078bce44100dd55c5 160 PIRSF PIRSF021441 1 159 2.1E-68 T 12-10-2018 IPR031306 CcdC protein BAMF_1881 53c24c9706e5663078bce44100dd55c5 160 Pfam PF07301 Protein of unknown function (DUF1453) 5 148 3.3E-58 T 12-10-2018 IPR009916 Protein of unknown function DUF1453 BAMF_1442 b0a79eab5af925b1207f4faf57938db8 209 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 11 202 4.2E-66 T 12-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 BAMF_1442 b0a79eab5af925b1207f4faf57938db8 209 Gene3D G3DSA:3.40.225.10 3 207 1.3E-50 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BAMF_1442 b0a79eab5af925b1207f4faf57938db8 209 SMART SM01007 9 198 1.7E-44 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal BAMF_1442 b0a79eab5af925b1207f4faf57938db8 209 SUPERFAMILY SSF53639 5 205 1.94E-45 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BAMF_1442 b0a79eab5af925b1207f4faf57938db8 209 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 195 2.0E-38 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal BAMF_1442 b0a79eab5af925b1207f4faf57938db8 209 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 206 112.002 T 12-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 BAMF_0959 8b84de8bca839ba5277e00040fd3a833 62 TIGRFAM TIGR01669 phage_XkdX: phage uncharacterized protein, XkdX family 1 41 9.1E-8 T 12-10-2018 IPR010022 Protein of unknown function XkdX BAMF_0959 8b84de8bca839ba5277e00040fd3a833 62 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 4 43 1.0E-16 T 12-10-2018 IPR010022 Protein of unknown function XkdX BAMF_3218 fc6aa20c0a8b9a8250eb157c94776a96 76 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 75 1.1E-24 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BAMF_3218 fc6aa20c0a8b9a8250eb157c94776a96 76 Pfam PF03840 Preprotein translocase SecG subunit 4 75 3.4E-23 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BAMF_3218 fc6aa20c0a8b9a8250eb157c94776a96 76 PRINTS PR01651 Protein-export SecG membrane protein signature 56 76 1.8E-14 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BAMF_3218 fc6aa20c0a8b9a8250eb157c94776a96 76 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.8E-14 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BAMF_3218 fc6aa20c0a8b9a8250eb157c94776a96 76 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.8E-14 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BAMF_2731 63a36b5b71bef5529085b86d9c4dad56 100 Pfam PF14007 YtpI-like protein 5 89 1.1E-31 T 12-10-2018 IPR025618 YtpI-like protein BAMF_0469 b7404c205fab8fee1b96556ac71f8077 141 Gene3D G3DSA:3.10.180.10 2 141 4.2E-51 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_0469 b7404c205fab8fee1b96556ac71f8077 141 SUPERFAMILY SSF54593 4 136 4.13E-28 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_0469 b7404c205fab8fee1b96556ac71f8077 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 130 2.4E-12 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BAMF_3393 9d4b88877724a2f2bce05181f2e8fee7 424 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 94 247 6.3E-60 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain BAMF_3393 9d4b88877724a2f2bce05181f2e8fee7 424 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 95 247 1.1E-52 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain BAMF_3393 9d4b88877724a2f2bce05181f2e8fee7 424 Gene3D G3DSA:1.10.260.150 72 343 1.0E-101 T 12-10-2018 BAMF_2764 30c1b4d1ae4a08a8247befb7135adcc2 243 Pfam PF03591 AzlC protein 28 168 1.3E-40 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease BAMF_0781 dff0d736ab7fede5bf71b588c1ebb6ac 333 SUPERFAMILY SSF52518 9 328 1.97E-99 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BAMF_0781 dff0d736ab7fede5bf71b588c1ebb6ac 333 Gene3D G3DSA:3.40.50.970 2 331 3.3E-123 T 12-10-2018 BAMF_0781 dff0d736ab7fede5bf71b588c1ebb6ac 333 Pfam PF00676 Dehydrogenase E1 component 22 316 1.3E-92 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BAMF_2893 a7c1400bf9691a690f9886fb7c9bf3a0 355 Pfam PF10651 Domain of unknown function (DUF2479) 2 74 6.9E-13 T 12-10-2018 IPR018913 Domain of unknown function DUF2479 BAMF_0203 1646f71ee8f7f65dc0fa79c7a689562e 526 PIRSF PIRSF006060 1 461 2.1E-76 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_0203 1646f71ee8f7f65dc0fa79c7a689562e 526 PIRSF PIRSF006060 428 526 14.0 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_0203 1646f71ee8f7f65dc0fa79c7a689562e 526 Gene3D G3DSA:1.20.1740.10 1 459 8.5E-79 T 12-10-2018 BAMF_0203 1646f71ee8f7f65dc0fa79c7a689562e 526 Pfam PF13520 Amino acid permease 9 428 3.8E-49 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_0156 0ddc419422a51ce19b0418976b1174ec 198 PIRSF PIRSF029886 1 198 6.6E-80 T 12-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 BAMF_0156 0ddc419422a51ce19b0418976b1174ec 198 Pfam PF14089 KinB-signalling pathway activation in sporulation 17 195 3.7E-73 T 12-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 BAMF_0156 0ddc419422a51ce19b0418976b1174ec 198 SMART SM01251 17 196 2.4E-109 T 12-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 BAMF_3363 5065bc10940333fb6a50ef2eea962907 117 ProDom PD072806 SWRA MOTILITY YVZD SWARMING MOTILITY-SWARMING 7 117 1.0E-53 T 12-10-2018 IPR035388 Swarming motility protein SwrA BAMF_3363 5065bc10940333fb6a50ef2eea962907 117 Pfam PF17423 Swarming motility protein 1 115 1.4E-55 T 12-10-2018 IPR035388 Swarming motility protein SwrA BAMF_0213 3c1dda7fe8345ac4b97c0906af983cad 162 Pfam PF09335 SNARE associated Golgi protein 29 155 7.2E-28 T 12-10-2018 IPR032816 SNARE associated Golgi protein BAMF_1570 59f32b9ec0ec135fa3af90f3a7172ec0 346 Pfam PF00188 Cysteine-rich secretory protein family 230 339 8.6E-16 T 12-10-2018 IPR014044 CAP domain BAMF_1570 59f32b9ec0ec135fa3af90f3a7172ec0 346 Gene3D G3DSA:3.40.33.10 22 343 2.0E-110 T 12-10-2018 IPR035940 CAP superfamily BAMF_1570 59f32b9ec0ec135fa3af90f3a7172ec0 346 SUPERFAMILY SSF55797 225 342 9.68E-23 T 12-10-2018 IPR035940 CAP superfamily BAMF_1570 59f32b9ec0ec135fa3af90f3a7172ec0 346 Pfam PF14504 CAP-associated N-terminal 60 199 3.0E-51 T 12-10-2018 IPR029410 CAP-associated domain BAMF_0061 92f3cdcc8a6069a49adf0a5e8aaa90a0 211 TIGRFAM TIGR02893 spore_yabQ: spore cortex biosynthesis protein YabQ 2 129 2.6E-45 T 12-10-2018 IPR014242 Spore cortex biosynthesis protein, YabQ BAMF_0061 92f3cdcc8a6069a49adf0a5e8aaa90a0 211 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 11 87 1.0E-21 T 12-10-2018 IPR019074 Spore cortex biosynthesis protein, YabQ-like BAMF_1515 7ba92ee0dc97e5e747561ca608a7762e 193 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 25 186 1.2E-52 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BAMF_1515 7ba92ee0dc97e5e747561ca608a7762e 193 Gene3D G3DSA:2.10.109.10 70 193 1.9E-37 T 12-10-2018 BAMF_1515 7ba92ee0dc97e5e747561ca608a7762e 193 ProSitePatterns PS00501 Signal peptidases I serine active site. 49 56 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 BAMF_1515 7ba92ee0dc97e5e747561ca608a7762e 193 ProSitePatterns PS00760 Signal peptidases I lysine active site. 93 105 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 BAMF_1515 7ba92ee0dc97e5e747561ca608a7762e 193 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 145 164 4.6E-25 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BAMF_1515 7ba92ee0dc97e5e747561ca608a7762e 193 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 91 103 4.6E-25 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BAMF_1515 7ba92ee0dc97e5e747561ca608a7762e 193 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 40 56 4.6E-25 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BAMF_1515 7ba92ee0dc97e5e747561ca608a7762e 193 Pfam PF00717 Peptidase S24-like 47 115 4.1E-20 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BAMF_1515 7ba92ee0dc97e5e747561ca608a7762e 193 ProSitePatterns PS00761 Signal peptidases I signature 3. 150 163 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 BAMF_1515 7ba92ee0dc97e5e747561ca608a7762e 193 SUPERFAMILY SSF51306 38 190 4.06E-50 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BAMF_0245 80fe10eaa8a38996dc100dc71654ac88 98 Gene3D G3DSA:3.40.50.1820 1 98 2.1E-26 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_0245 80fe10eaa8a38996dc100dc71654ac88 98 SUPERFAMILY SSF53474 2 75 6.83E-14 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_0245 80fe10eaa8a38996dc100dc71654ac88 98 Pfam PF01674 Lipase (class 2) 20 63 4.0E-5 T 12-10-2018 IPR002918 Lipase EstA/Esterase EstB GO:0016787 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 BAMF_3834 7a49e81b2dd3a1a4ab0a99092ef0321c 459 Gene3D G3DSA:3.40.50.300 15 251 1.7E-7 T 12-10-2018 BAMF_3834 7a49e81b2dd3a1a4ab0a99092ef0321c 459 SUPERFAMILY SSF52540 65 228 1.45E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_3834 7a49e81b2dd3a1a4ab0a99092ef0321c 459 Pfam PF13175 AAA ATPase domain 14 226 5.6E-25 T 12-10-2018 BAMF_0700 088a45b1b39ecb878f32a27303d82f71 386 Pfam PF00535 Glycosyl transferase family 2 4 127 3.7E-28 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BAMF_0700 088a45b1b39ecb878f32a27303d82f71 386 Gene3D G3DSA:3.90.550.10 1 263 1.1E-54 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_0700 088a45b1b39ecb878f32a27303d82f71 386 SUPERFAMILY SSF53448 2 263 1.61E-43 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3361 b6a8b2a0d7ba858ad512417ebd62d1a0 247 SUPERFAMILY SSF50974 1 247 4.97E-61 T 12-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 BAMF_3361 b6a8b2a0d7ba858ad512417ebd62d1a0 247 Gene3D G3DSA:2.130.10.10 1 110 1.2E-32 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BAMF_3361 b6a8b2a0d7ba858ad512417ebd62d1a0 247 Gene3D G3DSA:2.130.10.10 111 247 3.0E-37 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BAMF_3361 b6a8b2a0d7ba858ad512417ebd62d1a0 247 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 1 33 1.3E-7 T 12-10-2018 IPR011964 YVTN beta-propeller repeat BAMF_3361 b6a8b2a0d7ba858ad512417ebd62d1a0 247 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 163 200 5.4E-14 T 12-10-2018 IPR011964 YVTN beta-propeller repeat BAMF_3361 b6a8b2a0d7ba858ad512417ebd62d1a0 247 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 206 245 7.0E-11 T 12-10-2018 IPR011964 YVTN beta-propeller repeat BAMF_3361 b6a8b2a0d7ba858ad512417ebd62d1a0 247 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 36 77 1.3E-13 T 12-10-2018 IPR011964 YVTN beta-propeller repeat BAMF_3361 b6a8b2a0d7ba858ad512417ebd62d1a0 247 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 121 162 6.5E-14 T 12-10-2018 IPR011964 YVTN beta-propeller repeat BAMF_0438 abce66408bd968b460c7f53cd1facf00 199 Gene3D G3DSA:1.20.1540.10 9 199 5.9E-44 T 12-10-2018 IPR035952 Rhomboid-like superfamily BAMF_0438 abce66408bd968b460c7f53cd1facf00 199 SUPERFAMILY SSF144091 12 197 3.01E-43 T 12-10-2018 BAMF_0438 abce66408bd968b460c7f53cd1facf00 199 Pfam PF01694 Rhomboid family 54 195 5.1E-41 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BAMF_2432 768b988102b7b479bc16b84fd2e5e733 396 PIRSF PIRSF029895 1 396 1.0E-165 T 12-10-2018 IPR010690 Putative stage IV sporulation YqfD BAMF_2432 768b988102b7b479bc16b84fd2e5e733 396 Pfam PF06898 Putative stage IV sporulation protein YqfD 8 386 1.9E-116 T 12-10-2018 IPR010690 Putative stage IV sporulation YqfD BAMF_2432 768b988102b7b479bc16b84fd2e5e733 396 TIGRFAM TIGR02876 spore_yqfD: sporulation protein YqfD 5 388 2.6E-114 T 12-10-2018 IPR010690 Putative stage IV sporulation YqfD BAMF_1412 b641d84dc82f0c9e5c6a9486764358c6 199 Pfam PF09819 ABC-type cobalt transport system, permease component 7 125 1.6E-34 T 12-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted BAMF_1412 b641d84dc82f0c9e5c6a9486764358c6 199 PIRSF PIRSF037394 1 191 3.1E-64 T 12-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted BAMF_2567 9595711588ea1af38a818c04d7b92598 59 Pfam PF17449 Uncharacterized protein YrzK 4 57 2.4E-24 T 12-10-2018 IPR035378 Uncharacterized protein YrzK BAMF_2567 9595711588ea1af38a818c04d7b92598 59 ProDom PD051845 YRZK 10 56 6.0E-12 T 12-10-2018 IPR035378 Uncharacterized protein YrzK BAMF_1080 879ac5702d1222e6654bcc20c18be533 79 Pfam PF14120 YhzD-like protein 19 79 7.4E-26 T 12-10-2018 IPR025544 YhzD-like protein BAMF_0915 669c2e9bf74369a56c8328be4a9e3964 327 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 9 325 2.8E-141 T 12-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BAMF_0915 669c2e9bf74369a56c8328be4a9e3964 327 Gene3D G3DSA:1.10.620.20 6 296 6.6E-109 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 BAMF_0915 669c2e9bf74369a56c8328be4a9e3964 327 PIRSF PIRSF000355 2 322 3.1E-92 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_0915 669c2e9bf74369a56c8328be4a9e3964 327 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 99 116 - T 12-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_0915 669c2e9bf74369a56c8328be4a9e3964 327 SUPERFAMILY SSF47240 8 325 1.78E-91 T 12-10-2018 IPR009078 Ferritin-like superfamily BAMF_0915 669c2e9bf74369a56c8328be4a9e3964 327 Pfam PF00268 Ribonucleotide reductase, small chain 12 287 7.1E-79 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_3726 a20f5fc8339e2290a04328f6f8691448 397 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 80 8.3E-16 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 BAMF_3726 a20f5fc8339e2290a04328f6f8691448 397 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 395 8.6E-50 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 BAMF_3726 a20f5fc8339e2290a04328f6f8691448 397 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 395 7.4E-134 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 BAMF_1931 972d4390fd46e922cbd109db2bd800ef 70 Gene3D G3DSA:2.40.50.100 3 70 5.4E-25 T 12-10-2018 BAMF_1931 972d4390fd46e922cbd109db2bd800ef 70 SUPERFAMILY SSF51230 4 69 6.67E-20 T 12-10-2018 IPR011053 Single hybrid motif BAMF_1931 972d4390fd46e922cbd109db2bd800ef 70 Pfam PF00364 Biotin-requiring enzyme 7 69 8.3E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment BAMF_0184 e364f60338b504f5ecd59678d17fe9ec 131 Pfam PF13346 ABC-2 family transporter protein 2 123 7.0E-11 T 12-10-2018 IPR025699 ABC-2 membrane transporter-like BAMF_3222 84f507268bbb8d06a4153fd730f66bf0 105 Gene3D G3DSA:1.10.10.10 2 104 1.3E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3222 84f507268bbb8d06a4153fd730f66bf0 105 SUPERFAMILY SSF46785 4 103 8.62E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3222 84f507268bbb8d06a4153fd730f66bf0 105 Pfam PF01638 HxlR-like helix-turn-helix 16 104 1.6E-34 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type BAMF_3712 f3b6f27d6a6e28f9dbd7d84658e4bbcc 338 PIRSF PIRSF000267 1 338 1.1E-109 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BAMF_3712 f3b6f27d6a6e28f9dbd7d84658e4bbcc 338 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 326 2.5E-99 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BAMF_3712 f3b6f27d6a6e28f9dbd7d84658e4bbcc 338 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 2 226 7.9E-99 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BAMF_3712 f3b6f27d6a6e28f9dbd7d84658e4bbcc 338 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 227 337 4.5E-39 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BAMF_1993 0da929ded3e09a1b4e2c60f45bf60ce8 215 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 141 165 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BAMF_1993 0da929ded3e09a1b4e2c60f45bf60ce8 215 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 136 170 4.2E-11 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 BAMF_1993 0da929ded3e09a1b4e2c60f45bf60ce8 215 Gene3D G3DSA:1.20.120.910 43 177 2.2E-28 T 12-10-2018 BAMF_1993 0da929ded3e09a1b4e2c60f45bf60ce8 215 SUPERFAMILY SSF57716 138 170 5.42E-7 T 12-10-2018 BAMF_1993 0da929ded3e09a1b4e2c60f45bf60ce8 215 SUPERFAMILY SSF109635 55 137 3.79E-11 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily BAMF_0721 74d417220fdd68f4c370b116b61dd0dd 621 TIGRFAM TIGR03721 exospore_TM: BclB C-terminal domain 448 621 3.4E-62 T 12-10-2018 IPR021210 Exosporium BclB, C-terminal BAMF_0721 74d417220fdd68f4c370b116b61dd0dd 621 Pfam PF01391 Collagen triple helix repeat (20 copies) 73 129 6.6E-9 T 12-10-2018 IPR008160 Collagen triple helix repeat BAMF_0721 74d417220fdd68f4c370b116b61dd0dd 621 Pfam PF01391 Collagen triple helix repeat (20 copies) 391 448 6.2E-8 T 12-10-2018 IPR008160 Collagen triple helix repeat BAMF_0037 3fc0fede37df32c89d8cd7215c3f7a43 94 SMART SM00966 8 51 6.6E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BAMF_0037 3fc0fede37df32c89d8cd7215c3f7a43 94 SUPERFAMILY SSF89447 1 52 1.23E-16 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily BAMF_0037 3fc0fede37df32c89d8cd7215c3f7a43 94 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 8.8E-12 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BAMF_0037 3fc0fede37df32c89d8cd7215c3f7a43 94 Gene3D G3DSA:2.10.260.10 1 51 1.4E-26 T 12-10-2018 BAMF_0037 3fc0fede37df32c89d8cd7215c3f7a43 94 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 4.6E-11 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BAMF_2428 08fc6ede314da0f68b45f562d314a69f 126 Gene3D G3DSA:1.10.3830.10 7 126 2.6E-40 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BAMF_2428 08fc6ede314da0f68b45f562d314a69f 126 Pfam PF01219 Prokaryotic diacylglycerol kinase 21 121 1.3E-35 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BAMF_2428 08fc6ede314da0f68b45f562d314a69f 126 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 74 85 - T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BAMF_2342 fc46283437b9e5f445d91646d81ae06b 206 TIGRFAM TIGR02896 spore_III_AF: stage III sporulation protein AF 3 111 2.3E-37 T 12-10-2018 IPR014245 Sporulation stage III, protein AF BAMF_2342 fc46283437b9e5f445d91646d81ae06b 206 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 12 195 1.5E-40 T 12-10-2018 IPR014245 Sporulation stage III, protein AF BAMF_2296 d984bca6d80f58b8e6ed834020d43bfe 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 1.6E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_2296 d984bca6d80f58b8e6ed834020d43bfe 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 1.1E-31 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BAMF_2296 d984bca6d80f58b8e6ed834020d43bfe 219 Gene3D G3DSA:1.10.3720.10 1 218 9.6E-57 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2296 d984bca6d80f58b8e6ed834020d43bfe 219 SUPERFAMILY SSF161098 13 207 1.7E-45 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2263 45218de719a701fa5714de1a05619715 79 Pfam PF10827 Protein of unknown function (DUF2552) 2 79 1.3E-43 T 12-10-2018 IPR020157 Uncharacterised protein family YqkC BAMF_2263 45218de719a701fa5714de1a05619715 79 ProDom PD058987 CYTOSOLIC YQKC 21 79 6.0E-25 T 12-10-2018 IPR020157 Uncharacterised protein family YqkC BAMF_0716 b6673e1349d3ed91bfb91776418197eb 115 Pfam PF11181 Heat induced stress protein YflT 5 104 7.3E-31 T 12-10-2018 IPR025889 General stress protein 17M-like domain BAMF_1463 095cdc8cfd28da779326c19485eba109 364 Gene3D G3DSA:3.40.350.10 1 135 7.2E-39 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BAMF_1463 095cdc8cfd28da779326c19485eba109 364 SUPERFAMILY SSF53092 1 135 6.28E-33 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BAMF_1463 095cdc8cfd28da779326c19485eba109 364 PRINTS PR00599 Methionine aminopeptidase-1 signature 217 233 7.6E-7 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_1463 095cdc8cfd28da779326c19485eba109 364 PRINTS PR00599 Methionine aminopeptidase-1 signature 315 327 7.6E-7 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BAMF_1463 095cdc8cfd28da779326c19485eba109 364 Gene3D G3DSA:3.90.230.10 136 361 5.6E-81 T 12-10-2018 BAMF_1463 095cdc8cfd28da779326c19485eba109 364 Pfam PF01321 Creatinase/Prolidase N-terminal domain 3 137 8.3E-23 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 BAMF_1463 095cdc8cfd28da779326c19485eba109 364 SUPERFAMILY SSF55920 139 363 2.88E-77 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like BAMF_1463 095cdc8cfd28da779326c19485eba109 364 Pfam PF00557 Metallopeptidase family M24 146 347 5.7E-64 T 12-10-2018 IPR000994 Peptidase M24 BAMF_1463 095cdc8cfd28da779326c19485eba109 364 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 293 305 - T 12-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BAMF_2022 2876c7658b2f34c7cd0d8ffaac4293ca 154 Gene3D G3DSA:2.60.40.790 61 144 1.4E-5 T 12-10-2018 IPR008978 HSP20-like chaperone BAMF_2022 2876c7658b2f34c7cd0d8ffaac4293ca 154 SUPERFAMILY SSF49764 65 152 1.76E-8 T 12-10-2018 IPR008978 HSP20-like chaperone BAMF_2521 a7f3d56d7680a6c1e4f1ae20c1447f4a 402 SUPERFAMILY SSF103473 6 396 8.63E-64 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_2521 a7f3d56d7680a6c1e4f1ae20c1447f4a 402 Pfam PF07690 Major Facilitator Superfamily 18 329 1.5E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_2521 a7f3d56d7680a6c1e4f1ae20c1447f4a 402 Gene3D G3DSA:1.20.1250.20 7 386 1.3E-52 T 12-10-2018 BAMF_2900 f53b4c43724f980ef146a9abd65d4f00 194 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 1 178 3.4E-44 T 12-10-2018 IPR006490 Phage major tail protein, phi13 family BAMF_2900 f53b4c43724f980ef146a9abd65d4f00 194 Pfam PF04630 Phage tail tube protein 37 177 3.2E-6 T 12-10-2018 IPR006724 Phage tail tube protein 1 BAMF_0862 9dc341dec250014e93eb1f49f56545a8 111 Pfam PF11192 Protein of unknown function (DUF2977) 2 58 8.0E-11 T 12-10-2018 IPR021358 Protein of unknown function DUF2977 BAMF_0399 98359712eb5e0318d3ebe548a7d05370 606 Pfam PF13520 Amino acid permease 27 435 2.0E-34 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_0399 98359712eb5e0318d3ebe548a7d05370 606 Gene3D G3DSA:1.20.1740.10 37 467 1.1E-27 T 12-10-2018 BAMF_3301 7846d3a0d9cabeb158abad97667c2406 114 Gene3D G3DSA:3.10.450.130 34 109 3.8E-9 T 12-10-2018 BAMF_3301 7846d3a0d9cabeb158abad97667c2406 114 Pfam PF07252 Protein of unknown function (DUF1433) 36 84 3.5E-8 T 12-10-2018 IPR009881 Protein of unknown function DUF1433 BAMF_0793 389f6e52b4ec78143e9b585e71437658 134 Pfam PF07681 DoxX 9 86 1.9E-20 T 12-10-2018 IPR032808 DoxX family BAMF_2104 3d64ec0fbd4c96f56e284da080ab9720 1193 SUPERFAMILY SSF52540 30 264 2.18E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2104 3d64ec0fbd4c96f56e284da080ab9720 1193 SUPERFAMILY SSF52540 597 878 1.12E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2104 3d64ec0fbd4c96f56e284da080ab9720 1193 Pfam PF00350 Dynamin family 614 838 5.0E-39 T 12-10-2018 IPR022812 Dynamin superfamily BAMF_2104 3d64ec0fbd4c96f56e284da080ab9720 1193 Pfam PF00350 Dynamin family 48 202 2.6E-26 T 12-10-2018 IPR022812 Dynamin superfamily BAMF_2104 3d64ec0fbd4c96f56e284da080ab9720 1193 Gene3D G3DSA:3.40.50.300 48 285 2.3E-35 T 12-10-2018 BAMF_2538 9de0938a581209edd53f5a6b9eff25b5 238 Pfam PF07423 Protein of unknown function (DUF1510) 6 237 2.2E-72 T 12-10-2018 IPR009988 Protein of unknown function DUF1510 BAMF_3896 78c13768a8ad833b9bf3a9001e7f7d27 297 Pfam PF02517 CAAX protease self-immunity 143 240 6.4E-11 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 BAMF_2646 c7ace12196fade366e181f99d63d99d2 146 SMART SM00347 29 129 7.6E-22 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_2646 c7ace12196fade366e181f99d63d99d2 146 Gene3D G3DSA:1.10.10.10 2 145 1.7E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2646 c7ace12196fade366e181f99d63d99d2 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 5.2E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_2646 c7ace12196fade366e181f99d63d99d2 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 5.2E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_2646 c7ace12196fade366e181f99d63d99d2 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 5.2E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_2646 c7ace12196fade366e181f99d63d99d2 146 Pfam PF01047 MarR family 36 94 3.2E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BAMF_2646 c7ace12196fade366e181f99d63d99d2 146 SUPERFAMILY SSF46785 14 143 2.47E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_3505 692031e210884adff8555291ff1e35da 124 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 103 2.1E-49 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3505 692031e210884adff8555291ff1e35da 124 SUPERFAMILY SSF51278 1 120 4.32E-47 T 12-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3505 692031e210884adff8555291ff1e35da 124 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 28.826 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3505 692031e210884adff8555291ff1e35da 124 Pfam PF00699 Urease beta subunit 3 98 1.7E-41 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_3505 692031e210884adff8555291ff1e35da 124 Gene3D G3DSA:2.10.150.10 1 124 3.3E-49 T 12-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 BAMF_1429 4b35e9de879ca837f597bf3c64dffe9a 233 Pfam PF08876 Domain of unknown function (DUF1836) 62 158 6.0E-18 T 12-10-2018 IPR014975 Protein of unknown function DUF1836 BAMF_3649 f567ebd80b9965c8c151ffac2512eb2a 86 ProDom PD062384 GERMINATION SPORE TRANSMEMBRANE MEMBRANE MORPHOGENESIS YWCE 1 85 4.0E-40 T 12-10-2018 IPR020185 Spore morphogenesis/germination protein YwcE BAMF_3649 f567ebd80b9965c8c151ffac2512eb2a 86 Pfam PF17368 Spore morphogenesis and germination protein YwcE 1 84 7.0E-39 T 12-10-2018 IPR020185 Spore morphogenesis/germination protein YwcE BAMF_0335 8127fe5a52f3fe5aed46447faa810c28 263 Gene3D G3DSA:3.40.190.10 39 253 4.6E-61 T 12-10-2018 BAMF_0335 8127fe5a52f3fe5aed46447faa810c28 263 Gene3D G3DSA:3.40.190.10 115 216 4.6E-61 T 12-10-2018 BAMF_0335 8127fe5a52f3fe5aed46447faa810c28 263 SMART SM00062 33 256 1.4E-77 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BAMF_0335 8127fe5a52f3fe5aed46447faa810c28 263 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 55 68 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site BAMF_0335 8127fe5a52f3fe5aed46447faa810c28 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 5.9E-59 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BAMF_0335 8127fe5a52f3fe5aed46447faa810c28 263 SUPERFAMILY SSF53850 1 257 1.87E-65 T 12-10-2018 BAMF_0820 3ef632faf7ec2c4f050c920fa34ec071 174 Gene3D G3DSA:3.40.50.1820 1 168 5.6E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_0820 3ef632faf7ec2c4f050c920fa34ec071 174 Pfam PF00561 alpha/beta hydrolase fold 1 75 1.4E-13 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_0820 3ef632faf7ec2c4f050c920fa34ec071 174 SUPERFAMILY SSF53474 1 161 4.53E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_1343 9d99dbf011510d81dce185e2981be919 478 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 37 408 2.9E-139 T 12-10-2018 IPR006430 Phage portal protein PBSX family BAMF_1343 9d99dbf011510d81dce185e2981be919 478 Pfam PF04860 Phage portal protein 128 450 4.9E-10 T 12-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein BAMF_1343 9d99dbf011510d81dce185e2981be919 478 PIRSF PIRSF019260 7 478 1.8E-172 T 12-10-2018 IPR016753 Phage portal protein PBSX family, Firmicutes BAMF_0971 52ee90d3950d072fff98f1513b171479 61 Pfam PF13040 Fur-regulated basic protein B 20 56 1.5E-14 T 12-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS BAMF_0291 5adf97deff999e9764dbf7feeaab8677 318 Pfam PF05448 Acetyl xylan esterase (AXE1) 1 313 2.4E-133 T 12-10-2018 IPR008391 Acetyl xylan esterase BAMF_0291 5adf97deff999e9764dbf7feeaab8677 318 SUPERFAMILY SSF53474 8 317 1.42E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_0291 5adf97deff999e9764dbf7feeaab8677 318 Gene3D G3DSA:3.40.50.1820 1 318 1.4E-96 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_0649 94fb89d37e656ec5a498c1d442339a31 412 Pfam PF13520 Amino acid permease 8 372 2.8E-36 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_0649 94fb89d37e656ec5a498c1d442339a31 412 PIRSF PIRSF006060 1 410 1.5E-68 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_0649 94fb89d37e656ec5a498c1d442339a31 412 Gene3D G3DSA:1.20.1740.10 1 411 8.2E-70 T 12-10-2018 BAMF_2773 28698bf1c7b6e0c28d29ecefd44bbc69 271 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 190 207 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site BAMF_2773 28698bf1c7b6e0c28d29ecefd44bbc69 271 Pfam PF01618 MotA/TolQ/ExbB proton channel family 105 220 3.2E-23 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BAMF_0003 e0bd4960fbfcd779597c359ccdaf7698 71 SUPERFAMILY SSF55174 4 67 6.92E-19 T 12-10-2018 BAMF_0003 e0bd4960fbfcd779597c359ccdaf7698 71 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 5 63 1.3E-30 T 12-10-2018 IPR014330 RNA-binding S4-related,YaaA BAMF_0003 e0bd4960fbfcd779597c359ccdaf7698 71 Gene3D G3DSA:3.10.290.10 1 70 1.2E-24 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BAMF_0003 e0bd4960fbfcd779597c359ccdaf7698 71 Pfam PF13275 S4 domain 5 69 8.1E-29 T 12-10-2018 BAMF_0542 345bb8221c855db150a165f2c304654f 115 Pfam PF13273 Protein of unknown function (DUF4064) 2 84 2.2E-15 T 12-10-2018 IPR025273 Domain of unknown function DUF4064 BAMF_0362 80f0e639facf8ebf77020cf1460f7d24 203 Pfam PF07987 Domain of unkown function (DUF1775) 27 145 1.4E-18 T 12-10-2018 IPR012533 YcnI-like BAMF_0362 80f0e639facf8ebf77020cf1460f7d24 203 Gene3D G3DSA:2.60.40.2230 24 169 4.4E-35 T 12-10-2018 IPR038507 YcnI-like superfamily BAMF_1425 d3e90be68cd955451799e1f5abfa9875 260 Pfam PF03741 Integral membrane protein TerC family 15 203 1.6E-50 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 BAMF_1425 d3e90be68cd955451799e1f5abfa9875 260 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 12 243 2.0E-90 T 12-10-2018 IPR022493 Integral membrane YkoY BAMF_2507 27756a6f701731172a308eb58cac4b83 458 Gene3D G3DSA:1.20.1250.20 253 457 2.9E-14 T 12-10-2018 BAMF_2507 27756a6f701731172a308eb58cac4b83 458 SUPERFAMILY SSF103473 8 456 1.22E-49 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_2507 27756a6f701731172a308eb58cac4b83 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 224 242 2.5E-164 T 12-10-2018 BAMF_2507 27756a6f701731172a308eb58cac4b83 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 294 318 2.5E-164 T 12-10-2018 BAMF_2507 27756a6f701731172a308eb58cac4b83 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 165 189 2.5E-164 T 12-10-2018 BAMF_2507 27756a6f701731172a308eb58cac4b83 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 258 283 2.5E-164 T 12-10-2018 BAMF_2507 27756a6f701731172a308eb58cac4b83 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 110 130 2.5E-164 T 12-10-2018 BAMF_2507 27756a6f701731172a308eb58cac4b83 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 349 369 2.5E-164 T 12-10-2018 BAMF_2507 27756a6f701731172a308eb58cac4b83 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 203 221 2.5E-164 T 12-10-2018 BAMF_2507 27756a6f701731172a308eb58cac4b83 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 391 410 2.5E-164 T 12-10-2018 BAMF_2507 27756a6f701731172a308eb58cac4b83 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 2.5E-164 T 12-10-2018 BAMF_2507 27756a6f701731172a308eb58cac4b83 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 78 100 2.5E-164 T 12-10-2018 BAMF_2507 27756a6f701731172a308eb58cac4b83 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 2.5E-164 T 12-10-2018 BAMF_2507 27756a6f701731172a308eb58cac4b83 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 329 349 2.5E-164 T 12-10-2018 BAMF_2507 27756a6f701731172a308eb58cac4b83 458 Gene3D G3DSA:1.20.1720.10 15 252 6.1E-37 T 12-10-2018 BAMF_2507 27756a6f701731172a308eb58cac4b83 458 Pfam PF07690 Major Facilitator Superfamily 20 396 6.1E-41 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_3248 43fc294211c3021d7b415841a83d649d 309 Gene3D G3DSA:3.90.25.10 165 295 2.0E-72 T 12-10-2018 BAMF_3248 43fc294211c3021d7b415841a83d649d 309 Gene3D G3DSA:3.40.50.720 4 226 2.0E-72 T 12-10-2018 BAMF_3248 43fc294211c3021d7b415841a83d649d 309 SUPERFAMILY SSF51735 1 304 7.47E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BAMF_3248 43fc294211c3021d7b415841a83d649d 309 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 226 1.4E-47 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BAMF_3248 43fc294211c3021d7b415841a83d649d 309 PRINTS PR01713 Nucleotide sugar epimerase signature 197 212 1.5E-6 T 12-10-2018 BAMF_3248 43fc294211c3021d7b415841a83d649d 309 PRINTS PR01713 Nucleotide sugar epimerase signature 220 235 1.5E-6 T 12-10-2018 BAMF_3248 43fc294211c3021d7b415841a83d649d 309 PRINTS PR01713 Nucleotide sugar epimerase signature 267 284 1.5E-6 T 12-10-2018 BAMF_3105 5be750f0d102003c797ccc707fd4792c 385 Gene3D G3DSA:1.10.443.10 170 379 1.1E-54 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BAMF_3105 5be750f0d102003c797ccc707fd4792c 385 SUPERFAMILY SSF56349 64 375 5.89E-64 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BAMF_3105 5be750f0d102003c797ccc707fd4792c 385 Pfam PF14657 Arm DNA-binding domain 11 52 1.1E-10 T 12-10-2018 IPR028259 AP2-like integrase, N-terminal domain BAMF_3105 5be750f0d102003c797ccc707fd4792c 385 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 65 120 4.3E-13 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BAMF_3105 5be750f0d102003c797ccc707fd4792c 385 Pfam PF00589 Phage integrase family 172 369 1.5E-34 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BAMF_3105 5be750f0d102003c797ccc707fd4792c 385 Gene3D G3DSA:1.10.150.130 58 169 1.5E-29 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal BAMF_0411 e9a38098910abc49e340811b4f0051cb 106 Gene3D G3DSA:2.30.30.40 39 98 9.3E-6 T 12-10-2018 BAMF_2771 85d9720ff0e882159712f0e565efc207 388 PRINTS PR01272 Acetoin utilisation ACUC protein signature 312 331 2.0E-56 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 BAMF_2771 85d9720ff0e882159712f0e565efc207 388 PRINTS PR01272 Acetoin utilisation ACUC protein signature 106 119 2.0E-56 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 BAMF_2771 85d9720ff0e882159712f0e565efc207 388 PRINTS PR01272 Acetoin utilisation ACUC protein signature 273 289 2.0E-56 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 BAMF_2771 85d9720ff0e882159712f0e565efc207 388 PRINTS PR01272 Acetoin utilisation ACUC protein signature 85 99 2.0E-56 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 BAMF_2771 85d9720ff0e882159712f0e565efc207 388 PRINTS PR01272 Acetoin utilisation ACUC protein signature 332 348 2.0E-56 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 BAMF_2771 85d9720ff0e882159712f0e565efc207 388 PRINTS PR01272 Acetoin utilisation ACUC protein signature 349 368 2.0E-56 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 BAMF_2771 85d9720ff0e882159712f0e565efc207 388 PRINTS PR01272 Acetoin utilisation ACUC protein signature 15 35 2.0E-56 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 BAMF_2771 85d9720ff0e882159712f0e565efc207 388 Pfam PF00850 Histone deacetylase domain 21 315 7.6E-73 T 12-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BAMF_2771 85d9720ff0e882159712f0e565efc207 388 SUPERFAMILY SSF52768 5 372 4.36E-105 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily BAMF_2771 85d9720ff0e882159712f0e565efc207 388 PRINTS PR01270 Histone deacetylase superfamily signature 129 152 2.8E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BAMF_2771 85d9720ff0e882159712f0e565efc207 388 PRINTS PR01270 Histone deacetylase superfamily signature 248 258 2.8E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BAMF_2771 85d9720ff0e882159712f0e565efc207 388 PRINTS PR01270 Histone deacetylase superfamily signature 162 177 2.8E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BAMF_2771 85d9720ff0e882159712f0e565efc207 388 Gene3D G3DSA:3.40.800.20 1 373 2.0E-99 T 12-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BAMF_2706 f0f4ad61234770b889bb2ba1d0647882 128 SUPERFAMILY SSF46785 10 102 5.52E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_2706 f0f4ad61234770b889bb2ba1d0647882 128 Pfam PF01638 HxlR-like helix-turn-helix 16 104 1.0E-39 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type BAMF_2706 f0f4ad61234770b889bb2ba1d0647882 128 Gene3D G3DSA:1.10.10.10 3 117 5.3E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2051 a25374ed3211e8c7b69cb3466b0d3d64 231 SMART SM00882 9 205 2.0E-63 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BAMF_2051 a25374ed3211e8c7b69cb3466b0d3d64 231 SUPERFAMILY SSF100950 7 212 2.27E-61 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BAMF_2051 a25374ed3211e8c7b69cb3466b0d3d64 231 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 211 6.9E-89 T 12-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 BAMF_2051 a25374ed3211e8c7b69cb3466b0d3d64 231 Gene3D G3DSA:3.40.1080.10 5 215 9.6E-85 T 12-10-2018 BAMF_2051 a25374ed3211e8c7b69cb3466b0d3d64 231 Pfam PF01144 Coenzyme A transferase 9 204 7.9E-37 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BAMF_2544 b9d2c0097bfc84930855dec104a3f930 217 Gene3D G3DSA:3.40.50.150 4 217 2.3E-63 T 12-10-2018 BAMF_2544 b9d2c0097bfc84930855dec104a3f930 217 SUPERFAMILY SSF53335 9 216 5.68E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_2544 b9d2c0097bfc84930855dec104a3f930 217 Pfam PF01596 O-methyltransferase 35 215 7.1E-32 T 12-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 BAMF_2218 6d868371fa616b35a77d926f7ccade8d 383 SUPERFAMILY SSF56601 1 268 5.36E-66 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_2218 6d868371fa616b35a77d926f7ccade8d 383 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 268 357 7.5E-8 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BAMF_2218 6d868371fa616b35a77d926f7ccade8d 383 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 135 148 6.7E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BAMF_2218 6d868371fa616b35a77d926f7ccade8d 383 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 108 125 6.7E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BAMF_2218 6d868371fa616b35a77d926f7ccade8d 383 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 6.7E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BAMF_2218 6d868371fa616b35a77d926f7ccade8d 383 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 251 2.7E-75 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 BAMF_2218 6d868371fa616b35a77d926f7ccade8d 383 Gene3D G3DSA:2.30.140.30 268 359 2.1E-30 T 12-10-2018 BAMF_2218 6d868371fa616b35a77d926f7ccade8d 383 Gene3D G3DSA:3.40.710.10 32 267 3.0E-88 T 12-10-2018 BAMF_3669 0262af5b8815f9253ac8e154a0726042 129 Pfam PF03788 LrgA family 23 111 1.1E-27 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 BAMF_3669 0262af5b8815f9253ac8e154a0726042 129 Hamap MF_01143 Holin-like protein CidA [cidA]. 2 120 24.279 T 12-10-2018 IPR023760 Holin-like protein CidA GO:0016021 BAMF_1340 cb60aaea72acaa049f00af9cab749ff3 169 Pfam PF08281 Sigma-70, region 4 105 157 1.8E-12 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BAMF_1340 cb60aaea72acaa049f00af9cab749ff3 169 Gene3D G3DSA:1.10.10.10 94 165 8.9E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_1340 cb60aaea72acaa049f00af9cab749ff3 169 SUPERFAMILY SSF88659 99 162 1.09E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BAMF_1340 cb60aaea72acaa049f00af9cab749ff3 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 66 160 2.6E-12 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BAMF_0912 3f32e9f73317b7aa2d82251d23dacd9a 264 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 92 164 5.0E-17 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_0912 3f32e9f73317b7aa2d82251d23dacd9a 264 Pfam PF02867 Ribonucleotide reductase, barrel domain 169 264 1.1E-30 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_0912 3f32e9f73317b7aa2d82251d23dacd9a 264 SUPERFAMILY SSF51998 168 264 9.46E-32 T 12-10-2018 BAMF_0912 3f32e9f73317b7aa2d82251d23dacd9a 264 SUPERFAMILY SSF48168 9 167 3.01E-47 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BAMF_0912 3f32e9f73317b7aa2d82251d23dacd9a 264 Pfam PF08343 Ribonucleotide reductase N-terminal 10 90 2.3E-28 T 12-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BAMF_0912 3f32e9f73317b7aa2d82251d23dacd9a 264 Gene3D G3DSA:3.20.70.20 25 264 7.9E-51 T 12-10-2018 BAMF_3415 8ab909efef9ece1957ce8af73ae8b9c9 388 Gene3D G3DSA:3.40.50.11820 89 370 1.2E-58 T 12-10-2018 BAMF_3415 8ab909efef9ece1957ce8af73ae8b9c9 388 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 28 374 9.7E-82 T 12-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 BAMF_3415 8ab909efef9ece1957ce8af73ae8b9c9 388 Gene3D G3DSA:3.40.50.12580 201 364 1.2E-58 T 12-10-2018 BAMF_3415 8ab909efef9ece1957ce8af73ae8b9c9 388 SUPERFAMILY SSF53756 56 377 6.63E-26 T 12-10-2018 BAMF_3673 20a81c00118091a77c648e490c8197f4 293 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 86 286 1.1E-49 T 12-10-2018 IPR018728 Domain of unknown function DUF2268 BAMF_1306 a3618ed20866e7e0af8478049198c430 253 Pfam PF03649 Uncharacterised protein family (UPF0014) 4 240 9.3E-75 T 12-10-2018 IPR005226 UPF0014 family BAMF_1306 a3618ed20866e7e0af8478049198c430 253 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 1 246 1.4E-99 T 12-10-2018 IPR005226 UPF0014 family BAMF_3699 109224807728ea744bcb63a35d30a6af 93 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 92 2.3E-20 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BAMF_3699 109224807728ea744bcb63a35d30a6af 93 Gene3D G3DSA:3.40.50.2300 2 93 1.2E-29 T 12-10-2018 BAMF_3699 109224807728ea744bcb63a35d30a6af 93 SUPERFAMILY SSF52794 1 92 6.02E-31 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BAMF_2799 4e5558cd69c1a49a4cfb24a292d93a2a 386 Pfam PF05975 Bacterial ABC transporter protein EcsB 5 381 9.1E-37 T 12-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 BAMF_0249 6bbbb952efba528ab213ab963068993f 331 Gene3D G3DSA:2.60.40.1240 23 145 5.8E-18 T 12-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily BAMF_0249 6bbbb952efba528ab213ab963068993f 331 Pfam PF11611 Domain of unknown function (DUF4352) 49 128 1.8E-18 T 12-10-2018 IPR029051 Domain of unknown function DUF4352 BAMF_0249 6bbbb952efba528ab213ab963068993f 331 Pfam PF17118 Domain of unknown function (DUF5105) 148 327 5.5E-41 T 12-10-2018 IPR031343 Domain of unknown function DUF5105 BAMF_3214 bf61de21917de68b706910cd1a90bd75 100 Gene3D G3DSA:3.30.370.10 1 89 2.7E-32 T 12-10-2018 IPR035905 Barstar-like superfamily BAMF_3214 bf61de21917de68b706910cd1a90bd75 100 SUPERFAMILY SSF52038 2 88 2.09E-26 T 12-10-2018 IPR035905 Barstar-like superfamily BAMF_3214 bf61de21917de68b706910cd1a90bd75 100 Pfam PF01337 Barstar (barnase inhibitor) 5 82 5.9E-23 T 12-10-2018 IPR000468 Barstar (barnase inhibitor) BAMF_3695 26dcc01d4e1c5ad3954ab271d8cf18f2 337 Pfam PF01032 FecCD transport family 22 334 2.0E-87 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BAMF_3695 26dcc01d4e1c5ad3954ab271d8cf18f2 337 Gene3D G3DSA:1.10.3470.10 6 337 7.5E-91 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_3695 26dcc01d4e1c5ad3954ab271d8cf18f2 337 SUPERFAMILY SSF81345 9 334 2.09E-76 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BAMF_1519 b3f74a8f0646733af3099fa220ee48cd 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 324 345 4.4E-83 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BAMF_1519 b3f74a8f0646733af3099fa220ee48cd 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 389 408 4.4E-83 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BAMF_1519 b3f74a8f0646733af3099fa220ee48cd 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 15 32 4.4E-83 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BAMF_1519 b3f74a8f0646733af3099fa220ee48cd 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 80 99 4.4E-83 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BAMF_1519 b3f74a8f0646733af3099fa220ee48cd 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 301 321 4.4E-83 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BAMF_1519 b3f74a8f0646733af3099fa220ee48cd 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 363 385 4.4E-83 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BAMF_1519 b3f74a8f0646733af3099fa220ee48cd 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 245 264 4.4E-83 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BAMF_1519 b3f74a8f0646733af3099fa220ee48cd 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 156 178 4.4E-83 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BAMF_1519 b3f74a8f0646733af3099fa220ee48cd 410 SUPERFAMILY SSF144052 4 409 1.83E-154 T 12-10-2018 BAMF_1519 b3f74a8f0646733af3099fa220ee48cd 410 Pfam PF02073 Thermophilic metalloprotease (M29) 5 408 5.3E-178 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BAMF_1519 b3f74a8f0646733af3099fa220ee48cd 410 Gene3D G3DSA:3.40.1830.10 1 180 5.4E-69 T 12-10-2018 IPR035097 Peptidase M29, N-terminal BAMF_1858 8abd0bffedab932d521d3a56e24c97a2 357 SUPERFAMILY SSF51679 9 350 3.66E-74 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_1858 8abd0bffedab932d521d3a56e24c97a2 357 Gene3D G3DSA:3.20.20.30 3 357 1.2E-82 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_1858 8abd0bffedab932d521d3a56e24c97a2 357 Pfam PF00296 Luciferase-like monooxygenase 10 312 2.0E-52 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BAMF_1664 81db0323fe16cec9cf2e3c94d4d5dd0a 77 SUPERFAMILY SSF47336 2 76 4.45E-23 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_1664 81db0323fe16cec9cf2e3c94d4d5dd0a 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 77 2.4E-35 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BAMF_1664 81db0323fe16cec9cf2e3c94d4d5dd0a 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.652 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BAMF_1664 81db0323fe16cec9cf2e3c94d4d5dd0a 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BAMF_1664 81db0323fe16cec9cf2e3c94d4d5dd0a 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 55 76 2.0E-5 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BAMF_1664 81db0323fe16cec9cf2e3c94d4d5dd0a 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.5E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BAMF_1664 81db0323fe16cec9cf2e3c94d4d5dd0a 77 Gene3D G3DSA:1.10.1200.10 1 77 2.5E-29 T 12-10-2018 IPR036736 ACP-like superfamily BAMF_2074 79d7549d756f0e197b02803fca44ccd6 187 Pfam PF09911 Uncharacterized protein conserved in bacteria (DUF2140) 3 183 2.1E-60 T 12-10-2018 IPR018672 Protein of unknown function DUF2140 BAMF_2128 6df594f07cd91733c842ad3400dc6939 80 Pfam PF17522 Family of unknown function (DUF5446) 1 64 2.2E-19 T 12-10-2018 IPR020252 Protein of unknown function DUF5446 BAMF_2128 6df594f07cd91733c842ad3400dc6939 80 ProDom PD059812 YPPD 1 65 4.0E-4 T 12-10-2018 IPR020252 Protein of unknown function DUF5446 BAMF_1243 accc1b431a9c06287f634d3251b298f9 254 SUPERFAMILY SSF110399 1 239 1.23E-81 T 12-10-2018 BAMF_1243 accc1b431a9c06287f634d3251b298f9 254 Gene3D G3DSA:3.20.20.70 1 254 9.2E-118 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_1243 accc1b431a9c06287f634d3251b298f9 254 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 248 1.8E-110 T 12-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 BAMF_1243 accc1b431a9c06287f634d3251b298f9 254 Hamap MF_00443 Thiazole synthase [thiG]. 1 254 42.067 T 12-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 BAMF_2402 dc2a6754bccb0084c91bc26d9c1deebc 160 Pfam PF04306 Protein of unknown function (DUF456) 21 158 5.8E-39 T 12-10-2018 IPR007403 Protein of unknown function DUF456 BAMF_0243 8dbfbaa9304b44c60f7db99058d6be69 128 Gene3D G3DSA:1.10.357.10 1 128 7.0E-29 T 12-10-2018 BAMF_0243 8dbfbaa9304b44c60f7db99058d6be69 128 SUPERFAMILY SSF48498 18 127 2.8E-23 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BAMF_2322 8810385c4b15ae667d98b740f2570b52 373 Gene3D G3DSA:3.20.20.70 4 369 3.0E-108 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_2322 8810385c4b15ae667d98b740f2570b52 373 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 338 1.9E-106 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BAMF_2322 8810385c4b15ae667d98b740f2570b52 373 SUPERFAMILY SSF51395 6 340 1.22E-96 T 12-10-2018 BAMF_2094 bee9369a32738dbefa1b7c5fd6eb6adb 60 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 60 1.0E-16 T 12-10-2018 BAMF_1139 5108d6f61a7f3062ff81e981c241c222 208 Pfam PF09335 SNARE associated Golgi protein 41 159 2.6E-18 T 12-10-2018 IPR032816 SNARE associated Golgi protein BAMF_0315 322b28556de8f11666cd39430c0f7737 243 Gene3D G3DSA:3.40.50.1820 1 238 2.7E-63 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_0315 322b28556de8f11666cd39430c0f7737 243 Pfam PF00975 Thioesterase domain 15 236 4.6E-56 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 BAMF_0315 322b28556de8f11666cd39430c0f7737 243 SUPERFAMILY SSF53474 11 234 1.89E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2267 1662298ea21341c838dddb2d454ad731 156 SUPERFAMILY SSF55729 1 155 1.28E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_2267 1662298ea21341c838dddb2d454ad731 156 Pfam PF00583 Acetyltransferase (GNAT) family 30 124 2.4E-14 T 12-10-2018 IPR000182 GNAT domain BAMF_2267 1662298ea21341c838dddb2d454ad731 156 Gene3D G3DSA:3.40.630.30 1 156 7.4E-44 T 12-10-2018 BAMF_2267 1662298ea21341c838dddb2d454ad731 156 PIRSF PIRSF037663 1 156 2.0E-74 T 12-10-2018 IPR017255 Acetyltransferase, GNAT, predicted BAMF_3679 bfa680175273b1be1dcfa0c7bf356806 210 Gene3D G3DSA:1.10.287.860 163 210 2.9E-18 T 12-10-2018 BAMF_3679 bfa680175273b1be1dcfa0c7bf356806 210 SUPERFAMILY SSF81301 18 208 1.36E-57 T 12-10-2018 BAMF_3679 bfa680175273b1be1dcfa0c7bf356806 210 SMART SM00954 57 180 1.8E-46 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 BAMF_3679 bfa680175273b1be1dcfa0c7bf356806 210 Gene3D G3DSA:3.30.460.10 12 161 4.5E-52 T 12-10-2018 BAMF_3679 bfa680175273b1be1dcfa0c7bf356806 210 Pfam PF04607 Region found in RelA / SpoT proteins 57 178 2.0E-38 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 BAMF_2744 20cb41c8b92cc6f8d458ae9d47e7d49e 163 Pfam PF06271 RDD family 25 152 1.1E-22 T 12-10-2018 IPR010432 RDD BAMF_3487 cc5147b83a8ba8300424be7f6220f733 398 SUPERFAMILY SSF103473 10 386 1.22E-61 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3487 cc5147b83a8ba8300424be7f6220f733 398 Gene3D G3DSA:1.20.1250.20 6 379 1.2E-51 T 12-10-2018 BAMF_3487 cc5147b83a8ba8300424be7f6220f733 398 Pfam PF07690 Major Facilitator Superfamily 245 383 3.3E-17 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_3487 cc5147b83a8ba8300424be7f6220f733 398 Pfam PF07690 Major Facilitator Superfamily 16 239 1.2E-33 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_1461 db6a74d7e174eba0208023a50aa9c8f7 164 SUPERFAMILY SSF52833 1 161 1.64E-32 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_1461 db6a74d7e174eba0208023a50aa9c8f7 164 Gene3D G3DSA:3.40.30.10 21 163 6.2E-40 T 12-10-2018 BAMF_1461 db6a74d7e174eba0208023a50aa9c8f7 164 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BAMF_1461 db6a74d7e174eba0208023a50aa9c8f7 164 Pfam PF00578 AhpC/TSA family 36 147 6.3E-23 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BAMF_0374 26046d9f6e8759cbb8ac39e151f621c4 264 Gene3D G3DSA:3.40.1640.10 18 251 4.0E-98 T 12-10-2018 BAMF_0374 26046d9f6e8759cbb8ac39e151f621c4 264 SUPERFAMILY SSF160920 4 256 1.06E-115 T 12-10-2018 IPR038021 Putative hydro-lyase BAMF_0374 26046d9f6e8759cbb8ac39e151f621c4 264 Hamap MF_01830 Putative hydro-lyase . 9 263 54.772 T 12-10-2018 IPR016938 Uncharacterised protein family UPF0317 BAMF_0374 26046d9f6e8759cbb8ac39e151f621c4 264 Gene3D G3DSA:3.30.2040.10 123 235 4.0E-98 T 12-10-2018 BAMF_0374 26046d9f6e8759cbb8ac39e151f621c4 264 Pfam PF07286 Protein of unknown function (DUF1445) 113 255 1.0E-67 T 12-10-2018 IPR009906 D-glutamate cyclase BAMF_0374 26046d9f6e8759cbb8ac39e151f621c4 264 PIRSF PIRSF029755 1 264 4.3E-129 T 12-10-2018 IPR016938 Uncharacterised protein family UPF0317 BAMF_1049 6423c2f60f95b3ca90ecdc98179b5212 141 Pfam PF13411 MerR HTH family regulatory protein 11 78 7.2E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_1049 6423c2f60f95b3ca90ecdc98179b5212 141 Gene3D G3DSA:1.10.1660.10 4 126 5.5E-23 T 12-10-2018 BAMF_1049 6423c2f60f95b3ca90ecdc98179b5212 141 SMART SM00422 11 79 1.4E-25 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_1049 6423c2f60f95b3ca90ecdc98179b5212 141 SUPERFAMILY SSF46955 11 106 1.36E-19 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BAMF_1049 6423c2f60f95b3ca90ecdc98179b5212 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 23 36 1.2E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_1049 6423c2f60f95b3ca90ecdc98179b5212 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 46 66 1.2E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_1049 6423c2f60f95b3ca90ecdc98179b5212 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 12 23 1.2E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BAMF_2830 b30bb18eaac8a3a2bdb88306b330867c 90 Pfam PF10732 Protein of unknown function (DUF2524) 1 84 3.3E-38 T 12-10-2018 IPR019668 Uncharacterised protein family YtzC BAMF_2702 6387aa435a7b0a6810e9888ad63ce5ee 469 Pfam PF07261 Replication initiation and membrane attachment 329 394 1.5E-11 T 12-10-2018 IPR006343 DnaD domain BAMF_1713 912c45294f4475a9ef9972942d730eec 297 PIRSF PIRSF003092 2 295 3.9E-75 T 12-10-2018 IPR025501 ATP binding protein MinD BAMF_1713 912c45294f4475a9ef9972942d730eec 297 SUPERFAMILY SSF52540 27 273 8.75E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_1713 912c45294f4475a9ef9972942d730eec 297 Gene3D G3DSA:3.40.50.300 28 267 7.9E-52 T 12-10-2018 BAMF_1713 912c45294f4475a9ef9972942d730eec 297 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 29 264 7.6E-19 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BAMF_3386 d213fc0a39f4353ad7a5b0ba955a7c52 225 Pfam PF00156 Phosphoribosyl transferase domain 160 223 4.0E-6 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BAMF_3386 d213fc0a39f4353ad7a5b0ba955a7c52 225 SUPERFAMILY SSF53271 69 223 8.26E-19 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BAMF_3386 d213fc0a39f4353ad7a5b0ba955a7c52 225 Gene3D G3DSA:3.40.50.2020 108 225 1.6E-16 T 12-10-2018 BAMF_2019 36a2315dfa311ae388282b9493ebc94a 116 SUPERFAMILY SSF89442 1 116 3.66E-54 T 12-10-2018 IPR036492 Hypothetical protein YojF superfamily BAMF_2019 36a2315dfa311ae388282b9493ebc94a 116 Pfam PF08830 Protein of unknown function (DUF1806) 4 114 2.6E-51 T 12-10-2018 IPR014934 Protein of unknown function DUF1806 BAMF_2019 36a2315dfa311ae388282b9493ebc94a 116 Gene3D G3DSA:2.70.180.10 1 116 6.1E-54 T 12-10-2018 IPR036492 Hypothetical protein YojF superfamily BAMF_3764 d42f167e7d4a0d27b66602bf111acfee 393 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 392 1.2E-60 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 BAMF_3764 d42f167e7d4a0d27b66602bf111acfee 393 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.8E-21 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 BAMF_3764 d42f167e7d4a0d27b66602bf111acfee 393 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 391 8.8E-137 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 BAMF_1292 87e88dc66c75fd2a7ae793ffedc8287d 372 Gene3D G3DSA:3.20.20.80 24 369 8.8E-105 T 12-10-2018 BAMF_1292 87e88dc66c75fd2a7ae793ffedc8287d 372 SUPERFAMILY SSF51445 15 367 7.13E-85 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_1292 87e88dc66c75fd2a7ae793ffedc8287d 372 Pfam PF07745 Glycosyl hydrolase family 53 40 355 2.7E-95 T 12-10-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 BAMF_3775 db5d023f1ffda1c5c33407a9e05cda7a 622 PIRSF PIRSF018968 1 622 1.2E-133 T 12-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 BAMF_3775 db5d023f1ffda1c5c33407a9e05cda7a 622 Pfam PF02687 FtsX-like permease family 85 175 3.3E-7 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BAMF_0118 960373c2f2d8bc8bbb3f812bca6bff50 95 Pfam PF00276 Ribosomal protein L23 6 88 3.4E-32 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BAMF_0118 960373c2f2d8bc8bbb3f812bca6bff50 95 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 95 21.84 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BAMF_0118 960373c2f2d8bc8bbb3f812bca6bff50 95 ProSitePatterns PS00050 Ribosomal protein L23 signature. 77 92 - T 12-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BAMF_0118 960373c2f2d8bc8bbb3f812bca6bff50 95 SUPERFAMILY SSF54189 2 91 1.44E-30 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 BAMF_0118 960373c2f2d8bc8bbb3f812bca6bff50 95 Gene3D G3DSA:3.30.70.330 1 95 1.2E-32 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BAMF_2414 6edc1b2830055b71f94fb87d86eaf928 314 Gene3D G3DSA:3.40.1010.20 104 197 2.3E-97 T 12-10-2018 BAMF_2414 6edc1b2830055b71f94fb87d86eaf928 314 Pfam PF02401 LytB protein 4 284 5.9E-82 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BAMF_2414 6edc1b2830055b71f94fb87d86eaf928 314 Gene3D G3DSA:3.40.50.11270 12 103 2.3E-97 T 12-10-2018 BAMF_2414 6edc1b2830055b71f94fb87d86eaf928 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 33.167 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BAMF_2414 6edc1b2830055b71f94fb87d86eaf928 314 Gene3D G3DSA:3.40.1010.20 7 284 2.3E-97 T 12-10-2018 BAMF_2414 6edc1b2830055b71f94fb87d86eaf928 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 286 6.5E-98 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BAMF_1778 c7909071dd16c9a1bf161823f1841d3c 225 SUPERFAMILY SSF56281 6 214 7.86E-44 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_1778 c7909071dd16c9a1bf161823f1841d3c 225 SMART SM00849 18 181 2.1E-32 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_1778 c7909071dd16c9a1bf161823f1841d3c 225 Pfam PF00753 Metallo-beta-lactamase superfamily 20 181 3.4E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_1778 c7909071dd16c9a1bf161823f1841d3c 225 Gene3D G3DSA:3.60.15.10 9 223 1.8E-55 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_3016 9d9d4b6e19e5a6ad7a2562ddc30a9283 46 Gene3D G3DSA:3.40.630.30 1 43 2.9E-12 T 12-10-2018 BAMF_3016 9d9d4b6e19e5a6ad7a2562ddc30a9283 46 SUPERFAMILY SSF55729 1 41 6.99E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_0865 48d75f5c536166ebd28d572115a9aa9a 88 TIGRFAM TIGR01592 holin_SPP1: holin, SPP1 family 6 86 7.8E-29 T 12-10-2018 IPR006479 Holin BAMF_0865 48d75f5c536166ebd28d572115a9aa9a 88 Pfam PF04688 SPP1 phage holin 6 84 2.3E-28 T 12-10-2018 IPR006479 Holin BAMF_0865 48d75f5c536166ebd28d572115a9aa9a 88 ProDom PD008023 HOLIN TRANSMEMBRANE MEMBRANE PROPHAGE FAMILY BHLB SPP1 5'REGION HOLIN ORF050 6 88 2.0E-29 T 12-10-2018 IPR006479 Holin BAMF_2105 4d002ad2deb984769412efdb72e5bf73 168 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 73 163 2.2E-28 T 12-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 BAMF_2105 4d002ad2deb984769412efdb72e5bf73 168 Gene3D G3DSA:1.20.120.1630 1 167 4.7E-24 T 12-10-2018 BAMF_0242 ae516befed829af0257175353415ea75 477 Gene3D G3DSA:1.20.1720.10 15 249 1.7E-39 T 12-10-2018 BAMF_0242 ae516befed829af0257175353415ea75 477 SUPERFAMILY SSF103473 10 474 2.62E-62 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0242 ae516befed829af0257175353415ea75 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 78 100 1.3E-5 T 12-10-2018 BAMF_0242 ae516befed829af0257175353415ea75 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 1.3E-5 T 12-10-2018 BAMF_0242 ae516befed829af0257175353415ea75 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 1.3E-5 T 12-10-2018 BAMF_0242 ae516befed829af0257175353415ea75 477 Pfam PF07690 Major Facilitator Superfamily 20 412 9.8E-48 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_0242 ae516befed829af0257175353415ea75 477 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 15 431 4.0E-92 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BAMF_0242 ae516befed829af0257175353415ea75 477 Gene3D G3DSA:1.20.1250.20 264 476 6.8E-21 T 12-10-2018 BAMF_3097 c3f1b249b5e592918741e07cffcfea27 189 Gene3D G3DSA:2.40.50.140 1 180 7.5E-72 T 12-10-2018 BAMF_3097 c3f1b249b5e592918741e07cffcfea27 189 Pfam PF10991 Protein of unknown function (DUF2815) 11 178 4.4E-75 T 12-10-2018 IPR022595 Protein of unknown function DUF2815 BAMF_3097 c3f1b249b5e592918741e07cffcfea27 189 SUPERFAMILY SSF50249 8 179 4.28E-46 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BAMF_1178 c1c94b3207871bf4b0a4bd299175c6f0 324 Gene3D G3DSA:3.40.50.2300 136 320 1.5E-88 T 12-10-2018 BAMF_1178 c1c94b3207871bf4b0a4bd299175c6f0 324 Gene3D G3DSA:3.40.50.2300 37 289 1.5E-88 T 12-10-2018 BAMF_1178 c1c94b3207871bf4b0a4bd299175c6f0 324 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 37 321 5.9E-63 T 12-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 BAMF_1178 c1c94b3207871bf4b0a4bd299175c6f0 324 SUPERFAMILY SSF53822 34 275 7.54E-16 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BAMF_2467 b98a19ab0d06f6907bcde0cd9d5513bb 46 Pfam PF08970 Sporulation inhibitor A 1 44 7.2E-22 T 12-10-2018 IPR015064 Sporulation inhibitor A BAMF_2467 b98a19ab0d06f6907bcde0cd9d5513bb 46 Gene3D G3DSA:1.10.287.1100 4 37 9.8E-20 T 12-10-2018 IPR036916 Sporulation inhibitor A superfamily BAMF_2467 b98a19ab0d06f6907bcde0cd9d5513bb 46 SUPERFAMILY SSF100985 1 45 1.57E-16 T 12-10-2018 IPR036916 Sporulation inhibitor A superfamily BAMF_1482 241715e6a3a89601f9fbb5421befc5d7 287 Pfam PF00149 Calcineurin-like phosphoesterase 58 223 7.1E-12 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BAMF_1482 241715e6a3a89601f9fbb5421befc5d7 287 SUPERFAMILY SSF56300 55 284 2.67E-36 T 12-10-2018 BAMF_1482 241715e6a3a89601f9fbb5421befc5d7 287 Gene3D G3DSA:3.60.21.10 56 242 2.3E-22 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BAMF_1487 562e1c0056eb766d2bcac9cef0d8d1e0 172 Pfam PF04308 Ribonuclease H-like 19 172 1.2E-52 T 12-10-2018 IPR007405 Bacteriophage KVP40, Orf299 BAMF_3241 53c3804656d9b6394099025f0026c8a7 153 Gene3D G3DSA:3.40.630.30 1 153 4.8E-47 T 12-10-2018 BAMF_3241 53c3804656d9b6394099025f0026c8a7 153 SUPERFAMILY SSF55729 12 152 2.4E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_3241 53c3804656d9b6394099025f0026c8a7 153 Pfam PF00583 Acetyltransferase (GNAT) family 26 118 4.4E-14 T 12-10-2018 IPR000182 GNAT domain BAMF_0884 f2c09a4f381e6d4e4ac0bf69c897e844 321 SUPERFAMILY SSF56349 26 310 2.62E-48 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BAMF_0884 f2c09a4f381e6d4e4ac0bf69c897e844 321 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 40 112 2.1E-7 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BAMF_0884 f2c09a4f381e6d4e4ac0bf69c897e844 321 Pfam PF00589 Phage integrase family 139 303 6.6E-34 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BAMF_0884 f2c09a4f381e6d4e4ac0bf69c897e844 321 Gene3D G3DSA:1.10.150.130 19 132 1.9E-19 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal BAMF_0884 f2c09a4f381e6d4e4ac0bf69c897e844 321 Gene3D G3DSA:1.10.443.10 133 321 1.0E-45 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BAMF_2618 12c0b18c24c8fb758072feada7cfc27d 507 Pfam PF01476 LysM domain 458 500 3.8E-5 T 12-10-2018 IPR018392 LysM domain BAMF_2618 12c0b18c24c8fb758072feada7cfc27d 507 SMART SM00257 456 500 0.0017 T 12-10-2018 IPR018392 LysM domain BAMF_2618 12c0b18c24c8fb758072feada7cfc27d 507 Gene3D G3DSA:3.10.350.10 447 507 1.4E-7 T 12-10-2018 IPR036779 LysM domain superfamily BAMF_2618 12c0b18c24c8fb758072feada7cfc27d 507 SUPERFAMILY SSF54106 455 500 4.45E-6 T 12-10-2018 BAMF_3245 6a021e29548b61dbb68ca726025381d1 252 Pfam PF08889 WbqC-like protein family 16 231 4.7E-74 T 12-10-2018 IPR014985 WbqC-like protein family BAMF_2262 08a4fdebed6544b8f1981bc3a24f8926 250 SUPERFAMILY SSF53474 6 246 3.41E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2262 08a4fdebed6544b8f1981bc3a24f8926 250 Pfam PF12146 Serine aminopeptidase, S33 28 141 3.9E-12 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 BAMF_2262 08a4fdebed6544b8f1981bc3a24f8926 250 Gene3D G3DSA:3.40.50.1820 1 250 7.3E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_3401 0c1e4bc3ea27bc1d7bd3750ad8cbaa11 482 Pfam PF13440 Polysaccharide biosynthesis protein 32 326 2.1E-71 T 12-10-2018 BAMF_2555 a0b570bd3c50c251db1b978ad93a7b4a 43 Pfam PF13056 Protein of unknown function (DUF3918) 1 43 7.0E-19 T 12-10-2018 IPR025029 Protein of unknown function DUF3918 BAMF_3280 fa34e45bdcebe9782296aaf8585c0c02 344 Gene3D G3DSA:3.90.550.10 1 250 3.0E-50 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3280 fa34e45bdcebe9782296aaf8585c0c02 344 SUPERFAMILY SSF53448 4 224 8.75E-53 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3280 fa34e45bdcebe9782296aaf8585c0c02 344 Pfam PF00535 Glycosyl transferase family 2 7 132 3.1E-32 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BAMF_1424 4e1c1b7850045eceed2941d5937f34c4 189 Pfam PF09335 SNARE associated Golgi protein 8 133 2.1E-19 T 12-10-2018 IPR032816 SNARE associated Golgi protein BAMF_3610 cbfe8359069ab268e87f0b802744d111 474 PIRSF PIRSF006060 2 472 2.1E-79 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_3610 cbfe8359069ab268e87f0b802744d111 474 Gene3D G3DSA:1.20.1740.10 11 470 3.5E-63 T 12-10-2018 BAMF_3610 cbfe8359069ab268e87f0b802744d111 474 Pfam PF00324 Amino acid permease 20 463 3.1E-127 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BAMF_3610 cbfe8359069ab268e87f0b802744d111 474 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BAMF_2473 e43830ba4e1df38203d0c3663f0502e8 45 SUPERFAMILY SSF53041 3 44 1.57E-6 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BAMF_2473 e43830ba4e1df38203d0c3663f0502e8 45 Gene3D G3DSA:3.40.50.1390 1 45 9.0E-8 T 12-10-2018 BAMF_2473 e43830ba4e1df38203d0c3663f0502e8 45 Pfam PF00239 Resolvase, N terminal domain 7 44 1.1E-6 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BAMF_1067 4439e6c0f1341836668771d63385736d 68 Gene3D G3DSA:1.10.8.910 8 68 5.8E-31 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily BAMF_1067 4439e6c0f1341836668771d63385736d 68 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 BAMF_1067 4439e6c0f1341836668771d63385736d 68 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 1.6E-22 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 BAMF_1067 4439e6c0f1341836668771d63385736d 68 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 BAMF_1385 fbd8e0d82bc2bcf5dbe65656d6f67f33 311 Pfam PF02016 LD-carboxypeptidase 14 292 1.8E-78 T 12-10-2018 IPR003507 Peptidase family S66 BAMF_1385 fbd8e0d82bc2bcf5dbe65656d6f67f33 311 PIRSF PIRSF028757 2 307 1.2E-87 T 12-10-2018 IPR003507 Peptidase family S66 BAMF_1385 fbd8e0d82bc2bcf5dbe65656d6f67f33 311 Gene3D G3DSA:3.40.50.10740 1 159 3.1E-51 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal BAMF_1385 fbd8e0d82bc2bcf5dbe65656d6f67f33 311 SUPERFAMILY SSF52317 3 163 1.1E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BAMF_1385 fbd8e0d82bc2bcf5dbe65656d6f67f33 311 Gene3D G3DSA:3.50.30.60 169 302 7.1E-43 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BAMF_1385 fbd8e0d82bc2bcf5dbe65656d6f67f33 311 SUPERFAMILY SSF141986 144 298 3.27E-42 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BAMF_2529 0b7b4da8ed47fb4a21ca608b459000c2 122 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 4 111 1.6E-35 T 12-10-2018 IPR018745 Domain of unknown function DUF2294 BAMF_2985 5f0c9dc7e34a87e871696bbf13c3062d 429 Pfam PF10140 WXG100 protein secretion system (Wss), protein YukC 28 382 8.8E-128 T 12-10-2018 IPR018778 Type VII secretion system EssB BAMF_2985 5f0c9dc7e34a87e871696bbf13c3062d 429 Gene3D G3DSA:1.10.510.10 1 218 9.6E-79 T 12-10-2018 BAMF_2985 5f0c9dc7e34a87e871696bbf13c3062d 429 TIGRFAM TIGR03926 T7_EssB: type VII secretion protein EssB 8 382 1.1E-130 T 12-10-2018 IPR018778 Type VII secretion system EssB BAMF_2985 5f0c9dc7e34a87e871696bbf13c3062d 429 Gene3D G3DSA:1.25.40.680 241 399 2.3E-50 T 12-10-2018 BAMF_1706 a8061c1e79423d47a4d19cf047ac70a6 217 Pfam PF04347 Flagellar biosynthesis protein, FliO 101 198 8.4E-12 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 BAMF_3200 a91db7c0bb8457718e03c0a3e34b086e 101 Pfam PF02583 Metal-sensitive transcriptional repressor 17 97 2.6E-32 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 BAMF_3200 a91db7c0bb8457718e03c0a3e34b086e 101 Gene3D G3DSA:1.20.58.1000 1 100 6.2E-38 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily BAMF_0522 09a0eb76f8b5978d3492ec42174b3efd 520 PIRSF PIRSF006060 429 514 540.0 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_0522 09a0eb76f8b5978d3492ec42174b3efd 520 PIRSF PIRSF006060 1 460 9.9E-87 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_0522 09a0eb76f8b5978d3492ec42174b3efd 520 Pfam PF13520 Amino acid permease 11 419 8.3E-47 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BAMF_0522 09a0eb76f8b5978d3492ec42174b3efd 520 Gene3D G3DSA:1.20.1740.10 6 465 3.5E-76 T 12-10-2018 BAMF_3533 012c65fcb79cfa9109318aba138ff0b0 147 Gene3D G3DSA:3.40.630.30 2 134 1.4E-5 T 12-10-2018 BAMF_3126 a67d81a197cc6ebc830d2ecb29c9f3aa 302 PIRSF PIRSF000196 1 302 3.4E-120 T 12-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 BAMF_3126 a67d81a197cc6ebc830d2ecb29c9f3aa 302 Gene3D G3DSA:3.20.20.530 19 302 1.9E-91 T 12-10-2018 BAMF_3126 a67d81a197cc6ebc830d2ecb29c9f3aa 302 SUPERFAMILY SSF51730 34 297 1.57E-71 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like BAMF_3126 a67d81a197cc6ebc830d2ecb29c9f3aa 302 Pfam PF01619 Proline dehydrogenase 41 295 8.8E-37 T 12-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 BAMF_0339 5519e55a7d0a3af85e84aacb03c4b229 448 Gene3D G3DSA:3.30.1330.120 270 403 1.1E-110 T 12-10-2018 BAMF_0339 5519e55a7d0a3af85e84aacb03c4b229 448 Gene3D G3DSA:1.10.4100.10 25 419 1.1E-110 T 12-10-2018 BAMF_0339 5519e55a7d0a3af85e84aacb03c4b229 448 SUPERFAMILY SSF103378 3 435 2.35E-92 T 12-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 BAMF_0339 5519e55a7d0a3af85e84aacb03c4b229 448 Pfam PF03972 MmgE/PrpD family 11 424 3.2E-92 T 12-10-2018 IPR005656 MmgE/PrpD GO:0016829 BAMF_1937 3b2548cc989418e4210d7fa53f33341a 126 Pfam PF07098 Protein of unknown function (DUF1360) 11 107 1.3E-31 T 12-10-2018 IPR010773 Mycobacterium phage PG1, Gp7 BAMF_2842 3e18ac80a48ba027ade47b71dcb7faae 334 SUPERFAMILY SSF53850 33 257 5.74E-34 T 12-10-2018 BAMF_2842 3e18ac80a48ba027ade47b71dcb7faae 334 Gene3D G3DSA:3.40.190.10 115 218 2.1E-52 T 12-10-2018 BAMF_2842 3e18ac80a48ba027ade47b71dcb7faae 334 Gene3D G3DSA:3.40.190.10 39 306 2.1E-52 T 12-10-2018 BAMF_2842 3e18ac80a48ba027ade47b71dcb7faae 334 Pfam PF13379 NMT1-like family 42 263 1.1E-25 T 12-10-2018 BAMF_2793 7be7cc6bc4bb806137435bf7fc265ee3 309 Gene3D G3DSA:2.60.200.40 136 299 6.4E-38 T 12-10-2018 BAMF_2793 7be7cc6bc4bb806137435bf7fc265ee3 309 Gene3D G3DSA:3.40.50.10330 1 122 7.8E-29 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BAMF_2793 7be7cc6bc4bb806137435bf7fc265ee3 309 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 309 2.2E-90 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase BAMF_2793 7be7cc6bc4bb806137435bf7fc265ee3 309 SUPERFAMILY SSF111331 2 298 2.07E-61 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BAMF_2793 7be7cc6bc4bb806137435bf7fc265ee3 309 SMART SM00046 3 125 0.0014 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BAMF_2793 7be7cc6bc4bb806137435bf7fc265ee3 309 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 117 9.9E-28 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BAMF_0991 2b7a5e5a0ba27712925cc47e14ee39a4 210 Pfam PF13171 Protein of unknown function (DUF4004) 4 194 6.7E-73 T 12-10-2018 IPR025063 Protein of unknown function DUF4004 BAMF_3780 2f4ea5291d80f7b32fd72de8a7a05125 280 SUPERFAMILY SSF51658 5 272 3.4E-67 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily BAMF_3780 2f4ea5291d80f7b32fd72de8a7a05125 280 Pfam PF01261 Xylose isomerase-like TIM barrel 20 225 8.6E-31 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain BAMF_3780 2f4ea5291d80f7b32fd72de8a7a05125 280 Gene3D G3DSA:3.20.20.150 1 278 6.1E-80 T 12-10-2018 BAMF_1821 8598db9eb6209a78ff754501ac632f0d 599 Pfam PF04740 LXG domain of WXG superfamily 2 200 7.2E-50 T 12-10-2018 IPR006829 LXG domain BAMF_1821 8598db9eb6209a78ff754501ac632f0d 599 Pfam PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH 513 594 7.8E-29 T 12-10-2018 IPR026834 LHH BAMF_3177 6fd9e0fc67c8cfe18e6f700083101946 342 Gene3D G3DSA:3.40.720.10 236 334 1.0E-13 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BAMF_3177 6fd9e0fc67c8cfe18e6f700083101946 342 SUPERFAMILY SSF53649 241 314 6.28E-11 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BAMF_2202 19041791ce06719721ff13d4999c915d 195 Pfam PF02517 CAAX protease self-immunity 91 173 4.1E-11 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 BAMF_1418 61ac7431e813900305702580cca50447 60 Pfam PF13076 Fur-regulated basic protein A 13 43 1.0E-5 T 12-10-2018 IPR025072 Fur-regulated basic protein A BAMF_3569 9daca4619a20735d773e6f1f0561f588 142 Pfam PF09148 Domain of unknown function (DUF1934) 10 134 1.2E-31 T 12-10-2018 IPR015231 Protein of unknown function DUF1934 BAMF_3569 9daca4619a20735d773e6f1f0561f588 142 Gene3D G3DSA:2.40.128.20 1 142 9.4E-54 T 12-10-2018 IPR012674 Calycin BAMF_3569 9daca4619a20735d773e6f1f0561f588 142 SUPERFAMILY SSF50814 1 138 9.02E-41 T 12-10-2018 IPR012674 Calycin BAMF_3281 7acb66fdfb0ce02875847d839d753415 358 Pfam PF04230 Polysaccharide pyruvyl transferase 52 293 4.2E-31 T 12-10-2018 IPR007345 Polysaccharide pyruvyl transferase BAMF_3232 c41d33fcca8b34d44fdc551c3ff204fa 177 PIRSF PIRSF006707 2 177 1.2E-50 T 12-10-2018 IPR026282 DNA-binding protein, MJ1563 type BAMF_3232 c41d33fcca8b34d44fdc551c3ff204fa 177 Gene3D G3DSA:1.10.10.10 7 91 1.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_3232 c41d33fcca8b34d44fdc551c3ff204fa 177 SUPERFAMILY SSF46785 7 159 7.8E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_1073 6c98c54f3025a4dcef71fed9c937a56e 300 SUPERFAMILY SSF56784 15 284 1.71E-53 T 12-10-2018 IPR036412 HAD-like superfamily BAMF_1073 6c98c54f3025a4dcef71fed9c937a56e 300 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 18 279 2.8E-41 T 12-10-2018 IPR000150 Cof family GO:0016787 BAMF_1073 6c98c54f3025a4dcef71fed9c937a56e 300 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 18 252 1.2E-17 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BAMF_1073 6c98c54f3025a4dcef71fed9c937a56e 300 Pfam PF08282 haloacid dehalogenase-like hydrolase 19 279 1.2E-51 T 12-10-2018 BAMF_1073 6c98c54f3025a4dcef71fed9c937a56e 300 Gene3D G3DSA:3.40.50.1000 18 276 1.5E-86 T 12-10-2018 IPR023214 HAD superfamily BAMF_1073 6c98c54f3025a4dcef71fed9c937a56e 300 Gene3D G3DSA:3.30.1240.10 95 207 1.5E-86 T 12-10-2018 BAMF_0307 6abfe39a119e73acda65964015d09345 132 Gene3D G3DSA:2.60.34.30 1 132 2.3E-53 T 12-10-2018 IPR038691 DNA-entry nuclease inhibitor, ComJ superfamily BAMF_0307 6abfe39a119e73acda65964015d09345 132 ProDom PD081734 COMPETENCE J NIN DNA-ENTRY MEMBRANE INHIBITOR NUCLEASE 10 128 2.0E-61 T 12-10-2018 IPR020354 Competence, DNA-entry nuclease inhibitor, ComJ BAMF_0307 6abfe39a119e73acda65964015d09345 132 Pfam PF11033 Competence protein J (ComJ) 9 129 1.8E-45 T 12-10-2018 IPR020354 Competence, DNA-entry nuclease inhibitor, ComJ BAMF_2308 88fc014204de82c4ecbb38b9993a4ca7 80 Pfam PF11118 Protein of unknown function (DUF2627) 2 77 3.1E-33 T 12-10-2018 IPR020138 Uncharacterised protein family YqzF BAMF_2308 88fc014204de82c4ecbb38b9993a4ca7 80 ProDom PD058321 YQZF GSC13 TRANSMEMBRANE IG GKC13 MEMBRANE PROTEINS BH2767 RBL05544 SIMILAR 1 77 4.0E-17 T 12-10-2018 IPR020138 Uncharacterised protein family YqzF BAMF_0682 d4805f09cdee2a32fec3f341c509946e 189 Pfam PF05067 Manganese containing catalase 1 184 6.8E-79 T 12-10-2018 IPR007760 Manganese catalase BAMF_0682 d4805f09cdee2a32fec3f341c509946e 189 Gene3D G3DSA:1.20.1260.10 1 184 3.0E-63 T 12-10-2018 IPR012347 Ferritin-like BAMF_0682 d4805f09cdee2a32fec3f341c509946e 189 SUPERFAMILY SSF47240 1 186 2.92E-68 T 12-10-2018 IPR009078 Ferritin-like superfamily BAMF_0626 31b43839bb08631c1edaa4dc25904313 394 Pfam PF01882 Protein of unknown function DUF58 202 275 1.3E-18 T 12-10-2018 IPR002881 Domain of unknown function DUF58 BAMF_0378 010a0375790e6e59b4c39b29b2291e46 213 SUPERFAMILY SSF52266 2 201 2.66E-21 T 12-10-2018 BAMF_0378 010a0375790e6e59b4c39b29b2291e46 213 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 7 197 2.2E-20 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain BAMF_0378 010a0375790e6e59b4c39b29b2291e46 213 Gene3D G3DSA:3.40.50.1110 2 204 5.0E-23 T 12-10-2018 IPR036514 SGNH hydrolase superfamily BAMF_1846 511e8a950a9facd29964108367c8f063 140 Gene3D G3DSA:2.60.120.380 54 137 4.8E-5 T 12-10-2018 BAMF_0989 90fb57fb1a0df5722bac497173f99ebd 316 Pfam PF12671 Putative amidase domain 153 305 3.7E-39 T 12-10-2018 IPR024301 Putative amidase domain BAMF_3185 a8bc33073cd5e16b63748e640f884547 364 Pfam PF12698 ABC-2 family transporter protein 19 355 9.3E-32 T 12-10-2018 BAMF_1360 33cb8524938f1d81c4dd49417af9ea98 346 Pfam PF04865 Baseplate J-like protein 62 304 7.8E-59 T 12-10-2018 IPR006949 Baseplate protein J-like BAMF_3211 745717fee6b1961354bbb4117702be3b 179 Gene3D G3DSA:3.40.630.30 2 161 2.7E-20 T 12-10-2018 BAMF_3211 745717fee6b1961354bbb4117702be3b 179 Pfam PF00583 Acetyltransferase (GNAT) family 35 142 3.0E-10 T 12-10-2018 IPR000182 GNAT domain BAMF_3211 745717fee6b1961354bbb4117702be3b 179 SUPERFAMILY SSF55729 1 152 5.85E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_2503 63da260f19c07102cc960301a8dcf8f7 94 Gene3D G3DSA:3.20.80.10 1 94 5.1E-20 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BAMF_2503 63da260f19c07102cc960301a8dcf8f7 94 SUPERFAMILY SSF55136 6 94 2.54E-13 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BAMF_2503 63da260f19c07102cc960301a8dcf8f7 94 Pfam PF06445 GyrI-like small molecule binding domain 14 94 8.3E-15 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain BAMF_2678 b85443ec2408f3463a18af99d526ac56 280 SUPERFAMILY SSF161098 9 280 2.06E-65 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2678 b85443ec2408f3463a18af99d526ac56 280 Gene3D G3DSA:1.10.3720.10 3 271 5.3E-58 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_2678 b85443ec2408f3463a18af99d526ac56 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 271 1.5E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_3499 2e267cc87d39dbd179862bb2ff00f472 145 ProDom PD087515 YWNF MEMBRANE SYNTHASE BH1886 BETA-KETOACYL TRANSMEMBRANE 1 141 1.0E-23 T 12-10-2018 IPR020205 Uncharacterised protein family, YwnF, transmembrane BAMF_3499 2e267cc87d39dbd179862bb2ff00f472 145 Pfam PF17370 Family of unknown function (DUF5392) 6 141 2.0E-47 T 12-10-2018 IPR020205 Uncharacterised protein family, YwnF, transmembrane BAMF_3004 3ccf081ab8b808e236437f83ab6d4c3d 108 Pfam PF14068 Putative membrane protein 9 108 3.9E-43 T 12-10-2018 IPR025917 Putative membrane protein YuiB BAMF_0503 e305e8ab07674ef8646feec7dfcc7d71 152 Pfam PF00583 Acetyltransferase (GNAT) family 37 134 1.2E-18 T 12-10-2018 IPR000182 GNAT domain BAMF_0503 e305e8ab07674ef8646feec7dfcc7d71 152 Gene3D G3DSA:3.40.630.30 43 151 3.2E-25 T 12-10-2018 BAMF_0503 e305e8ab07674ef8646feec7dfcc7d71 152 SUPERFAMILY SSF55729 1 145 3.82E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BAMF_1260 adb8d7e5640c20e9634d3aa8aeef0e46 240 PIRSF PIRSF006648 2 240 3.3E-20 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BAMF_1260 adb8d7e5640c20e9634d3aa8aeef0e46 240 Pfam PF01061 ABC-2 type transporter 7 203 4.1E-24 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 BAMF_2370 ac04bf8bc9623b51e795a5e311b64503 125 Pfam PF14173 ComG operon protein 7 30 124 1.6E-18 T 12-10-2018 IPR020372 Competence operon G protein 7, ComGG BAMF_2370 ac04bf8bc9623b51e795a5e311b64503 125 ProDom PD078266 COMPETENCE COMGG LATE MACHINERY OPERON DNA THE PART PRECURSOR PROBABLY 1 124 3.0E-27 T 12-10-2018 IPR020372 Competence operon G protein 7, ComGG BAMF_2786 6127267fb7b4ada8062f1b7e78f201b2 105 Pfam PF03413 Peptidase propeptide and YPEB domain 29 98 1.9E-7 T 12-10-2018 IPR025711 PepSY domain BAMF_0301 e1d4c1b589fed7251be8a727999ee0d1 93 SUPERFAMILY SSF103473 2 80 3.53E-10 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0301 e1d4c1b589fed7251be8a727999ee0d1 93 Gene3D G3DSA:1.20.1250.20 1 93 2.7E-22 T 12-10-2018 BAMF_0875 d63860499a991e840a60ad6735d33d01 88 Pfam PF14182 YgaB-like protein 3 78 1.1E-32 T 12-10-2018 IPR025572 YgaB-like protein BAMF_3362 08be9d189c5fadc33f3ffe392ddaacdb 396 SMART SM00228 295 361 1.4E-6 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_3362 08be9d189c5fadc33f3ffe392ddaacdb 396 SUPERFAMILY SSF50156 303 386 1.45E-13 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BAMF_3362 08be9d189c5fadc33f3ffe392ddaacdb 396 Gene3D G3DSA:2.30.42.10 280 373 3.0E-11 T 12-10-2018 BAMF_3362 08be9d189c5fadc33f3ffe392ddaacdb 396 Pfam PF13180 PDZ domain 299 349 3.3E-6 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BAMF_0759 636df76586c033d241b199a25b796e65 157 SUPERFAMILY SSF52788 1 151 1.18E-46 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily BAMF_0759 636df76586c033d241b199a25b796e65 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 81 96 4.3E-14 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BAMF_0759 636df76586c033d241b199a25b796e65 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 47 63 4.3E-14 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BAMF_0759 636df76586c033d241b199a25b796e65 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 4.3E-14 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BAMF_0759 636df76586c033d241b199a25b796e65 157 Gene3D G3DSA:3.40.50.2300 1 157 7.7E-61 T 12-10-2018 BAMF_0759 636df76586c033d241b199a25b796e65 157 SMART SM00226 2 150 7.1E-56 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BAMF_0759 636df76586c033d241b199a25b796e65 157 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 148 6.0E-43 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BAMF_0987 53f88b984478132ffb100014a7499412 207 SUPERFAMILY SSF56037 85 201 9.15E-9 T 12-10-2018 BAMF_3117 8e5d457f19a379d5f56d3f41c40918f8 106 Pfam PF00085 Thioredoxin 13 97 2.7E-10 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 BAMF_3117 8e5d457f19a379d5f56d3f41c40918f8 106 Gene3D G3DSA:3.40.30.10 1 103 3.8E-14 T 12-10-2018 BAMF_3117 8e5d457f19a379d5f56d3f41c40918f8 106 SUPERFAMILY SSF52833 6 98 1.03E-17 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_2353 599945fe8effa6816b09c9669ac05c57 131 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 5 131 8.0E-57 T 12-10-2018 BAMF_3406 aca2b9a54363e7396b03ce7e21c84c99 306 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 82 225 1.1E-53 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain BAMF_3406 aca2b9a54363e7396b03ce7e21c84c99 306 Gene3D G3DSA:1.10.260.150 47 306 3.4E-87 T 12-10-2018 BAMF_3406 aca2b9a54363e7396b03ce7e21c84c99 306 Hamap MF_01140 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU [tagU]. 9 306 47.84 T 12-10-2018 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU BAMF_3406 aca2b9a54363e7396b03ce7e21c84c99 306 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 83 224 1.0E-47 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain BAMF_3719 3b38c09d52527a8747ee04d4311a449d 212 Gene3D G3DSA:2.60.40.1240 71 212 1.2E-46 T 12-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily BAMF_3719 3b38c09d52527a8747ee04d4311a449d 212 Pfam PF11611 Domain of unknown function (DUF4352) 78 206 2.2E-17 T 12-10-2018 IPR029051 Domain of unknown function DUF4352 BAMF_1744 a5fdfcd91241d11e04ae7558c8983d2d 85 Gene3D G3DSA:2.30.30.240 1 79 1.7E-8 T 12-10-2018 BAMF_1744 a5fdfcd91241d11e04ae7558c8983d2d 85 Pfam PF05239 PRC-barrel domain 1 79 2.0E-15 T 12-10-2018 IPR027275 PRC-barrel domain BAMF_1744 a5fdfcd91241d11e04ae7558c8983d2d 85 SUPERFAMILY SSF50346 1 75 1.96E-12 T 12-10-2018 IPR011033 PRC-barrel-like superfamily BAMF_1744 a5fdfcd91241d11e04ae7558c8983d2d 85 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 2 76 2.7E-28 T 12-10-2018 IPR014238 Sporulation protein YlmC/YmxH BAMF_3641 014fa16de1c74667b0738c708cd07836 333 SUPERFAMILY SSF51679 3 329 8.51E-72 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_3641 014fa16de1c74667b0738c708cd07836 333 Pfam PF00296 Luciferase-like monooxygenase 13 304 7.3E-37 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BAMF_3641 014fa16de1c74667b0738c708cd07836 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 329 6.5E-121 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 BAMF_3641 014fa16de1c74667b0738c708cd07836 333 Gene3D G3DSA:3.20.20.30 1 333 1.3E-98 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BAMF_0220 b9ede619f1887bfeeb5a5f8f9f666eeb 316 SUPERFAMILY SSF82282 3 313 2.88E-87 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BAMF_0220 b9ede619f1887bfeeb5a5f8f9f666eeb 316 Pfam PF02574 Homocysteine S-methyltransferase 14 308 6.1E-82 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 BAMF_0220 b9ede619f1887bfeeb5a5f8f9f666eeb 316 Gene3D G3DSA:3.20.20.330 1 308 2.9E-112 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BAMF_0220 b9ede619f1887bfeeb5a5f8f9f666eeb 316 PIRSF PIRSF037505 2 106 5.5E-5 T 12-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 BAMF_0220 b9ede619f1887bfeeb5a5f8f9f666eeb 316 PIRSF PIRSF037505 263 314 0.058 T 12-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 BAMF_3324 5cbb36365380becbe7925420fc17d928 295 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 9 291 42.153 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 BAMF_3324 5cbb36365380becbe7925420fc17d928 295 PIRSF PIRSF005052 9 294 7.3E-109 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 BAMF_3324 5cbb36365380becbe7925420fc17d928 295 Pfam PF03668 P-loop ATPase protein family 9 292 4.0E-143 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 BAMF_3324 5cbb36365380becbe7925420fc17d928 295 SUPERFAMILY SSF52540 11 166 2.88E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BAMF_2282 7c4246f780755c52030cddfaeced052c 257 SUPERFAMILY SSF53474 12 239 1.62E-23 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2282 7c4246f780755c52030cddfaeced052c 257 Gene3D G3DSA:3.40.50.1820 13 241 3.8E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BAMF_2282 7c4246f780755c52030cddfaeced052c 257 Pfam PF00561 alpha/beta hydrolase fold 30 132 4.3E-13 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BAMF_2933 fded4e99de2d526649d1cc95406000da 134 Gene3D G3DSA:3.30.310.100 4 111 6.5E-29 T 12-10-2018 IPR036491 YugN-like superfamily BAMF_2933 fded4e99de2d526649d1cc95406000da 134 SUPERFAMILY SSF160755 1 132 2.48E-35 T 12-10-2018 IPR036491 YugN-like superfamily BAMF_2933 fded4e99de2d526649d1cc95406000da 134 Pfam PF08868 YugN-like family 4 132 2.2E-50 T 12-10-2018 IPR014967 Uncharacterised protein family, YugN-like BAMF_3228 905f67bf9d54d93a8e58ea17c53c5842 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 209 8.7E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_3228 905f67bf9d54d93a8e58ea17c53c5842 225 Gene3D G3DSA:1.10.3720.10 13 211 6.7E-30 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3228 905f67bf9d54d93a8e58ea17c53c5842 225 SUPERFAMILY SSF161098 17 197 1.96E-34 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_0077 c92f7e62caa60a4eab2f9604a192e30c 285 Pfam PF00809 Pterin binding enzyme 28 261 1.5E-86 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BAMF_0077 c92f7e62caa60a4eab2f9604a192e30c 285 Gene3D G3DSA:3.20.20.20 9 282 1.2E-111 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BAMF_0077 c92f7e62caa60a4eab2f9604a192e30c 285 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 27 276 1.0E-100 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 BAMF_0077 c92f7e62caa60a4eab2f9604a192e30c 285 SUPERFAMILY SSF51717 17 278 1.7E-98 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BAMF_0077 c92f7e62caa60a4eab2f9604a192e30c 285 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 27 42 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BAMF_0077 c92f7e62caa60a4eab2f9604a192e30c 285 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 61 74 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BAMF_0824 fb72200ce3629245c6be675213e2ecbe 327 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 162 1.7E-26 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase BAMF_0169 42e08aba29157f8c385387f0cfca3f74 414 PIRSF PIRSF016719 1 414 6.4E-176 T 12-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 BAMF_0169 42e08aba29157f8c385387f0cfca3f74 414 Gene3D G3DSA:3.90.1150.140 252 399 3.1E-154 T 12-10-2018 BAMF_0169 42e08aba29157f8c385387f0cfca3f74 414 Gene3D G3DSA:3.40.50.12170 39 414 3.1E-154 T 12-10-2018 BAMF_0169 42e08aba29157f8c385387f0cfca3f74 414 Pfam PF07075 Protein of unknown function (DUF1343) 57 414 9.5E-149 T 12-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 BAMF_2546 e2b806b6e7fb9703bff240a83c03435a 93 Hamap MF_01448 UPF0473 protein . 4 89 22.065 T 12-10-2018 IPR009711 Uncharacterised protein family UPF0473 BAMF_2546 e2b806b6e7fb9703bff240a83c03435a 93 Pfam PF06949 Protein of unknown function (DUF1292) 13 87 1.5E-17 T 12-10-2018 IPR009711 Uncharacterised protein family UPF0473 BAMF_0188 d8f8c932a91739a81aea37e978eec64b 230 Pfam PF04172 LrgB-like family 14 225 4.3E-70 T 12-10-2018 IPR007300 CidB/LrgB family BAMF_2029 17cd199fbdc1bc90366ad64958f027a3 66 Pfam PF11755 Protein of unknown function (DUF3311) 9 62 2.6E-13 T 12-10-2018 IPR021741 Protein of unknown function DUF3311 BAMF_1361 9f88a6bf5719d719f6bef6f3c4bd5ee6 192 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 5 149 3.4E-31 T 12-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 BAMF_3865 ac3d733256af1aaaf2c8eeaa2741442e 47 Pfam PF14174 YycC-like protein 1 46 6.9E-24 T 12-10-2018 IPR025550 YycC-like protein BAMF_2493 7d9eb86afda5fd645c44404cb407c1ce 46 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 23 46 5.0E-6 T 12-10-2018 IPR020288 Protein of unknown function DUF2634 BAMF_2874 c31f80525f26742c82e9dbeca2a91375 181 Gene3D G3DSA:2.60.40.3490 43 172 1.2E-55 T 12-10-2018 IPR038480 YuaB-like superfamily BAMF_2874 c31f80525f26742c82e9dbeca2a91375 181 ProDom PD034110 YWEA MEMBRANE YUAB TRANSMEMBRANE ORF-1 47 170 4.0E-54 T 12-10-2018 IPR034650 YuaB-like BAMF_2281 77a37528c4bfa625cc9807417bad98f4 101 SUPERFAMILY SSF51395 2 98 1.57E-18 T 12-10-2018 BAMF_2281 77a37528c4bfa625cc9807417bad98f4 101 Gene3D G3DSA:3.20.20.70 1 101 6.3E-24 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_2281 77a37528c4bfa625cc9807417bad98f4 101 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 1 89 1.1E-13 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BAMF_1279 c6f0e3215533243673f184866077dcd4 109 Pfam PF08863 YolD-like protein 14 105 4.0E-17 T 12-10-2018 IPR014962 YolD-like protein BAMF_1720 d30a4a00c6b67d4f8f81fc972c558e97 157 ProDom PD177368 TRANSCRIPTION DNA-BINDING MOTILITY SWRB SWARMING YLXL REGULATION BH2428 1 154 1.0E-41 T 12-10-2018 BAMF_2956 d63759108e0ce4c6a6159bda14dbcb24 348 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 329 1.6E-44 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BAMF_1238 5308cac6e67218a099653009f726b53d 204 Pfam PF00999 Sodium/hydrogen exchanger family 10 187 3.7E-38 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BAMF_1238 5308cac6e67218a099653009f726b53d 204 Gene3D G3DSA:1.20.1530.20 2 197 5.5E-34 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily BAMF_2815 8264c28a51ea9bfdf797abf81e4ab733 109 Pfam PF14074 Protein of unknown function (DUF4257) 5 84 3.0E-34 T 12-10-2018 IPR025353 Protein of unknown function DUF4257) BAMF_2815 8264c28a51ea9bfdf797abf81e4ab733 109 ProDom PD866859 YTVB PLASMID MEMBRANE TRANSMEMBRANE 1 107 1.0E-46 T 12-10-2018 BAMF_0537 59484e8f67250501304d1fa59fa92020 63 Pfam PF14146 Domain of unknown function (DUF4305) 17 52 6.8E-13 T 12-10-2018 IPR025426 Protein of unknown function DUF4305 BAMF_0537 59484e8f67250501304d1fa59fa92020 63 ProDom PD053380 YDIK LIPOPROTEIN TRANSMEMBRANE MEMBRANE PRECURSOR PALMITATE SIGNAL 1 63 2.0E-28 T 12-10-2018 BAMF_0426 8757066197ffd77b4b4be5256ee8ec24 255 Pfam PF12730 ABC-2 family transporter protein 6 182 2.1E-21 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 BAMF_3044 099c76f0abf95e3494dc7ef4f11f9c2c 531 Pfam PF07905 Purine catabolism regulatory protein-like family 5 124 4.3E-32 T 12-10-2018 IPR012914 Purine catabolism PurC-like domain BAMF_3044 099c76f0abf95e3494dc7ef4f11f9c2c 531 Pfam PF13556 PucR C-terminal helix-turn-helix domain 468 525 6.7E-24 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BAMF_3044 099c76f0abf95e3494dc7ef4f11f9c2c 531 Gene3D G3DSA:1.10.10.2840 402 530 1.1E-23 T 12-10-2018 BAMF_1531 4e0e64e9a566d4b2f4e04a18a479a913 61 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 34 56 2.2E-13 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BAMF_1531 4e0e64e9a566d4b2f4e04a18a479a913 61 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 32 57 2.2E-15 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BAMF_1394 639080f9435cfbf280079f172be0d5e7 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.0E-29 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BAMF_1394 639080f9435cfbf280079f172be0d5e7 104 SUPERFAMILY SSF103481 6 101 1.11E-17 T 12-10-2018 BAMF_1394 639080f9435cfbf280079f172be0d5e7 104 Gene3D G3DSA:1.10.3730.20 1 104 6.7E-25 T 12-10-2018 BAMF_0151 b96a3a1669b92de1fe7b320d3d3ad90b 255 SUPERFAMILY SSF53335 46 234 3.05E-25 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BAMF_0151 b96a3a1669b92de1fe7b320d3d3ad90b 255 Gene3D G3DSA:3.40.50.150 51 238 1.5E-19 T 12-10-2018 BAMF_0151 b96a3a1669b92de1fe7b320d3d3ad90b 255 Pfam PF08241 Methyltransferase domain 63 158 1.3E-14 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BAMF_1184 7fdd6291af440843351c683e5492f01a 65 Pfam PF12758 Protein of unknown function (DUF3813) 1 64 8.4E-28 T 12-10-2018 IPR024217 Protein of unknown function DUF3813 BAMF_2437 2f63c9a5e2d70967f337b0aac94c7ab5 148 Gene3D G3DSA:1.10.1510.10 1 91 8.2E-30 T 12-10-2018 BAMF_2437 2f63c9a5e2d70967f337b0aac94c7ab5 148 Pfam PF09424 Yqey-like protein 5 147 6.6E-53 T 12-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 BAMF_2437 2f63c9a5e2d70967f337b0aac94c7ab5 148 SUPERFAMILY SSF89095 1 147 4.66E-42 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 BAMF_2437 2f63c9a5e2d70967f337b0aac94c7ab5 148 Gene3D G3DSA:1.10.10.410 92 148 1.6E-26 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal BAMF_1256 10ae075728f3e8eba6d4a5c9dd03c352 84 Pfam PF14069 Stage VI sporulation protein F 6 76 1.4E-26 T 12-10-2018 IPR025942 Stage VI sporulation protein F BAMF_0800 80b7ab517fad4b1159073bff23bda7ce 90 Pfam PF01337 Barstar (barnase inhibitor) 6 81 1.1E-22 T 12-10-2018 IPR000468 Barstar (barnase inhibitor) BAMF_0800 80b7ab517fad4b1159073bff23bda7ce 90 Gene3D G3DSA:3.30.370.10 2 90 4.1E-38 T 12-10-2018 IPR035905 Barstar-like superfamily BAMF_0800 80b7ab517fad4b1159073bff23bda7ce 90 SUPERFAMILY SSF52038 4 87 4.32E-27 T 12-10-2018 IPR035905 Barstar-like superfamily BAMF_1129 63eead48faf56f5ce2fb1565f762f92c 77 Gene3D G3DSA:4.10.810.10 19 77 1.0E-11 T 12-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 BAMF_1129 63eead48faf56f5ce2fb1565f762f92c 77 SMART SM00914 34 70 4.8E-13 T 12-10-2018 IPR014957 IDEAL domain BAMF_1129 63eead48faf56f5ce2fb1565f762f92c 77 Pfam PF08858 IDEAL domain 34 70 3.2E-15 T 12-10-2018 IPR014957 IDEAL domain BAMF_2103 f4e60aadab260da6323292e24608424a 89 Pfam PF10752 Protein of unknown function (DUF2533) 6 88 3.5E-39 T 12-10-2018 IPR019688 Protein of unknown function DUF2533 BAMF_0493 a2d4cc8f15c2e814207846f06876edd8 123 Gene3D G3DSA:1.20.1640.10 3 90 8.2E-7 T 12-10-2018 BAMF_0493 a2d4cc8f15c2e814207846f06876edd8 123 Pfam PF03176 MMPL family 6 96 2.1E-16 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 BAMF_0493 a2d4cc8f15c2e814207846f06876edd8 123 SUPERFAMILY SSF82866 8 90 5.89E-14 T 12-10-2018 BAMF_2960 bdeae0651855fec2ef13cd70bcb8625b 143 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 10 134 7.4E-36 T 12-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein BAMF_2960 bdeae0651855fec2ef13cd70bcb8625b 143 TIGRFAM TIGR00943 2a6301s02: monovalent cation:proton antiporter 29 135 6.3E-44 T 12-10-2018 IPR005281 Monovalent cation:proton antiporter, subunit B GO:0006812|GO:0008324|GO:0016021 BAMF_1158 3f034ea8b39a7387015abeb8134053d4 73 Pfam PF10676 Spore germination protein gerPA/gerPF 1 72 3.5E-31 T 12-10-2018 IPR019618 Spore germination protein GerPA/GerPF BAMF_1698 75d9aca1b7515eb5e0018279d016ead0 447 Pfam PF02120 Flagellar hook-length control protein FliK 328 403 1.0E-18 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal BAMF_1698 75d9aca1b7515eb5e0018279d016ead0 447 Gene3D G3DSA:3.30.750.140 296 431 3.0E-10 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily BAMF_1459 bae67061e86da4668d79880ef3046b09 207 Pfam PF07486 Cell Wall Hydrolase 108 205 4.1E-26 T 12-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 BAMF_1459 bae67061e86da4668d79880ef3046b09 207 Gene3D G3DSA:1.10.10.2520 92 170 1.9E-29 T 12-10-2018 BAMF_1459 bae67061e86da4668d79880ef3046b09 207 Gene3D G3DSA:2.40.10.420 175 207 2.5E-14 T 12-10-2018 BAMF_0965 4a3838fd40b582e35e74ca30ab2ad97e 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 66 1.2E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BAMF_0965 4a3838fd40b582e35e74ca30ab2ad97e 68 SUPERFAMILY SSF47413 2 58 2.1E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BAMF_0965 4a3838fd40b582e35e74ca30ab2ad97e 68 Gene3D G3DSA:1.10.260.40 3 68 1.2E-6 T 12-10-2018 BAMF_2977 8c4cd9b115fb63342139cb3a3a545fbc 82 ProDom PD060056 YUEH 1 82 5.0E-27 T 12-10-2018 IPR020260 Uncharacterised protein family YueH BAMF_2977 8c4cd9b115fb63342139cb3a3a545fbc 82 Pfam PF14166 YueH-like protein 2 81 2.5E-29 T 12-10-2018 IPR020260 Uncharacterised protein family YueH BAMF_2450 e8b7c65ef38466c446efbacbc1c53056 397 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 179 382 6.4E-74 T 12-10-2018 IPR010897 Sporulation stage II, protein P BAMF_2450 e8b7c65ef38466c446efbacbc1c53056 397 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 103 378 5.1E-76 T 12-10-2018 IPR010897 Sporulation stage II, protein P BAMF_2450 e8b7c65ef38466c446efbacbc1c53056 397 SUPERFAMILY SSF53187 240 379 5.34E-7 T 12-10-2018 BAMF_3783 6afbcd5c13cbfe0d4bee5ecffa27eb88 431 Gene3D G3DSA:1.20.1250.20 12 420 1.5E-49 T 12-10-2018 BAMF_3783 6afbcd5c13cbfe0d4bee5ecffa27eb88 431 SUPERFAMILY SSF103473 14 413 1.7E-56 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3783 6afbcd5c13cbfe0d4bee5ecffa27eb88 431 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 85 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_3783 6afbcd5c13cbfe0d4bee5ecffa27eb88 431 ProSitePatterns PS00217 Sugar transport proteins signature 2. 111 136 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BAMF_3783 6afbcd5c13cbfe0d4bee5ecffa27eb88 431 Pfam PF07690 Major Facilitator Superfamily 32 363 2.7E-33 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_1014 a455db9620ee4ab69acd2b99eb798f5e 222 Pfam PF07875 Coat F domain 123 184 1.1E-15 T 12-10-2018 IPR012851 Spore coat protein CotF-like BAMF_2086 46f41206b14dbaab0f8096f082239322 144 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 144 4.8E-66 T 12-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family BAMF_2086 46f41206b14dbaab0f8096f082239322 144 Pfam PF06491 Disulphide isomerase 8 144 6.5E-63 T 12-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family BAMF_2086 46f41206b14dbaab0f8096f082239322 144 Gene3D G3DSA:3.40.30.10 25 144 5.4E-57 T 12-10-2018 BAMF_2727 d8f4b0f17df8fc06ae20589348d28849 113 Pfam PF14034 Sporulation protein YtrH 10 108 5.1E-41 T 12-10-2018 IPR025689 Sporulation protein YtrH BAMF_3855 e98f52837caa725f17e38a9ae30fe075 264 Gene3D G3DSA:3.60.15.10 8 250 4.6E-41 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_3855 e98f52837caa725f17e38a9ae30fe075 264 SUPERFAMILY SSF56281 7 232 1.97E-43 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BAMF_3855 e98f52837caa725f17e38a9ae30fe075 264 Pfam PF00753 Metallo-beta-lactamase superfamily 12 218 5.4E-29 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_3855 e98f52837caa725f17e38a9ae30fe075 264 SMART SM00849 13 218 3.0E-17 T 12-10-2018 IPR001279 Metallo-beta-lactamase BAMF_3058 21ab02330b7b56211310b5a7a30bdabe 196 TIGRFAM TIGR04032 toxin_SdpC: antimicrobial peptide, SdpC family 33 191 2.8E-36 T 12-10-2018 IPR023888 Antimicrobial peptide, SdpC family BAMF_0659 7767040d5016c3f71a3ed3bb1dc9d622 331 Gene3D G3DSA:3.90.1200.10 117 309 1.9E-21 T 12-10-2018 BAMF_0659 7767040d5016c3f71a3ed3bb1dc9d622 331 Pfam PF01636 Phosphotransferase enzyme family 30 236 8.9E-28 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase BAMF_0659 7767040d5016c3f71a3ed3bb1dc9d622 331 SUPERFAMILY SSF56112 14 306 7.29E-55 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BAMF_1103 85d6ce68f90fe2321b60dc32bc9cdeac 166 Gene3D G3DSA:3.30.70.3430 1 166 3.7E-74 T 12-10-2018 BAMF_1103 85d6ce68f90fe2321b60dc32bc9cdeac 166 SUPERFAMILY SSF54909 66 162 5.75E-24 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BAMF_1103 85d6ce68f90fe2321b60dc32bc9cdeac 166 Pfam PF03992 Antibiotic biosynthesis monooxygenase 66 139 2.9E-15 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain BAMF_0519 d3f7c09de366f424ad1b860198e052df 104 SUPERFAMILY SSF103481 5 102 1.27E-19 T 12-10-2018 BAMF_0519 d3f7c09de366f424ad1b860198e052df 104 Gene3D G3DSA:1.10.3730.20 1 104 6.0E-32 T 12-10-2018 BAMF_0519 d3f7c09de366f424ad1b860198e052df 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.7E-31 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BAMF_1582 56122ff5e76c942d5e378262e05d39ff 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 2.6E-26 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1582 56122ff5e76c942d5e378262e05d39ff 59 Pfam PF01783 Ribosomal L32p protein family 2 54 3.4E-25 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_1582 56122ff5e76c942d5e378262e05d39ff 59 SUPERFAMILY SSF57829 1 54 3.54E-21 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BAMF_1582 56122ff5e76c942d5e378262e05d39ff 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 19.34 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BAMF_2230 6aaf57149b189a9b5a1f53a44cbe0b09 163 Pfam PF07301 Protein of unknown function (DUF1453) 6 158 4.8E-31 T 12-10-2018 IPR009916 Protein of unknown function DUF1453 BAMF_0893 7f8eefcb23fec22d62fb80cce49725f8 248 Gene3D G3DSA:3.30.40.60 67 180 9.7E-6 T 12-10-2018 BAMF_2081 9c264ec42e0795d4d8df7d429e8b84a6 207 SUPERFAMILY SSF69593 10 175 2.35E-11 T 12-10-2018 BAMF_3343 cc80bd01f406407da2ab422c6549f8bb 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 10 255 2.9E-78 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BAMF_3343 cc80bd01f406407da2ab422c6549f8bb 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 261 17.965 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BAMF_3343 cc80bd01f406407da2ab422c6549f8bb 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 265 1.7E-89 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BAMF_3343 cc80bd01f406407da2ab422c6549f8bb 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 136 148 - T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BAMF_3630 ed7bde99b67ff9666b9f7af231b7ded7 140 Pfam PF17261 Family of unknown function (DUF5327) 33 140 1.1E-23 T 12-10-2018 IPR035218 Protein of unknown function DUF5327 BAMF_3630 ed7bde99b67ff9666b9f7af231b7ded7 140 ProDom PD705231 YWDI GROUP-SPECIFIC 34 140 6.0E-28 T 12-10-2018 IPR035218 Protein of unknown function DUF5327 BAMF_1269 aed2cc4340898cff7269e73a03b265e3 155 Pfam PF14436 Bacterial EndoU nuclease 40 152 4.7E-25 T 12-10-2018 IPR029501 Bacterial EndoU nuclease BAMF_3880 efcf1d4533faf198d5005d54a7f4e9d0 472 Pfam PF02435 Levansucrase/Invertase 40 469 1.3E-168 T 12-10-2018 IPR003469 Glycoside hydrolase, family 68 GO:0009758|GO:0050053 BAMF_3880 efcf1d4533faf198d5005d54a7f4e9d0 472 Gene3D G3DSA:2.115.10.20 29 467 1.9E-179 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BAMF_3880 efcf1d4533faf198d5005d54a7f4e9d0 472 SUPERFAMILY SSF75005 35 471 1.57E-109 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BAMF_0672 b410b5b4f17a041e77d1f5ec700849b8 106 Pfam PF04634 Protein of unknown function, DUF600 13 105 8.0E-29 T 12-10-2018 IPR006728 Protein of unknown function DUF600 BAMF_0672 b410b5b4f17a041e77d1f5ec700849b8 106 SUPERFAMILY SSF160424 10 105 1.11E-25 T 12-10-2018 IPR036170 Probable antitoxin YezG superfamily BAMF_0672 b410b5b4f17a041e77d1f5ec700849b8 106 TIGRFAM TIGR01741 staph_tand_hypo: conserved hypothetical protein 7 105 1.8E-42 T 12-10-2018 IPR006728 Protein of unknown function DUF600 BAMF_0672 b410b5b4f17a041e77d1f5ec700849b8 106 Gene3D G3DSA:3.30.500.20 7 106 2.8E-29 T 12-10-2018 BAMF_0502 8d6882009907f3ba99dfd9e33c2fc182 252 Pfam PF01925 Sulfite exporter TauE/SafE 9 248 1.5E-39 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BAMF_0510 afbd2fd401b2facc95520313e2d7db7d 113 SUPERFAMILY SSF53756 3 107 4.32E-14 T 12-10-2018 BAMF_0510 afbd2fd401b2facc95520313e2d7db7d 113 Gene3D G3DSA:3.40.50.2000 1 112 8.2E-20 T 12-10-2018 BAMF_2528 40b396af596d811c2b5010ec247f0b2b 266 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 253 1.6E-78 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 BAMF_2528 40b396af596d811c2b5010ec247f0b2b 266 Gene3D G3DSA:1.20.1080.10 4 263 1.4E-86 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BAMF_2528 40b396af596d811c2b5010ec247f0b2b 266 Pfam PF01226 Formate/nitrite transporter 8 249 4.2E-78 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 BAMF_2528 40b396af596d811c2b5010ec247f0b2b 266 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 162 172 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site BAMF_2528 40b396af596d811c2b5010ec247f0b2b 266 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 77 86 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site BAMF_1541 a8b706ce20eb6de515cfa546168e49f0 88 Hamap MF_01041 UPF0223 protein . 1 88 25.211 T 12-10-2018 IPR007920 Protein of unknown function UPF0223 BAMF_1541 a8b706ce20eb6de515cfa546168e49f0 88 SUPERFAMILY SSF158504 4 87 7.19E-33 T 12-10-2018 IPR023324 BH2638-like superfamily BAMF_1541 a8b706ce20eb6de515cfa546168e49f0 88 Gene3D G3DSA:1.10.220.80 12 88 2.0E-29 T 12-10-2018 IPR023324 BH2638-like superfamily BAMF_1541 a8b706ce20eb6de515cfa546168e49f0 88 PIRSF PIRSF037260 1 88 2.1E-38 T 12-10-2018 IPR007920 Protein of unknown function UPF0223 BAMF_1541 a8b706ce20eb6de515cfa546168e49f0 88 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 1 88 1.0E-38 T 12-10-2018 IPR007920 Protein of unknown function UPF0223 BAMF_1541 a8b706ce20eb6de515cfa546168e49f0 88 Pfam PF05256 Uncharacterised protein family (UPF0223) 2 86 8.3E-37 T 12-10-2018 IPR007920 Protein of unknown function UPF0223 BAMF_0853 a8420e47c00736cd1c8abc579811b696 191 Pfam PF04630 Phage tail tube protein 1 178 5.6E-16 T 12-10-2018 IPR006724 Phage tail tube protein 1 BAMF_0853 a8420e47c00736cd1c8abc579811b696 191 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 1 179 4.9E-27 T 12-10-2018 IPR006490 Phage major tail protein, phi13 family BAMF_1150 33d3b099272a3e3ddf160900f24c12d6 390 Pfam PF00149 Calcineurin-like phosphoesterase 1 93 7.3E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BAMF_1150 33d3b099272a3e3ddf160900f24c12d6 390 Gene3D G3DSA:3.60.21.10 1 273 1.2E-77 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BAMF_1150 33d3b099272a3e3ddf160900f24c12d6 390 SUPERFAMILY SSF56300 1 329 4.88E-55 T 12-10-2018 BAMF_1150 33d3b099272a3e3ddf160900f24c12d6 390 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 252 8.3E-84 T 12-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 BAMF_2514 96f007f05b94b1e9cb60156c3c507ba4 241 Gene3D G3DSA:3.40.50.10490 77 241 1.7E-31 T 12-10-2018 BAMF_2514 96f007f05b94b1e9cb60156c3c507ba4 241 SUPERFAMILY SSF46689 5 70 6.81E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BAMF_2514 96f007f05b94b1e9cb60156c3c507ba4 241 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 69 2.9E-15 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BAMF_2514 96f007f05b94b1e9cb60156c3c507ba4 241 Gene3D G3DSA:1.10.10.10 3 71 3.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BAMF_2514 96f007f05b94b1e9cb60156c3c507ba4 241 Pfam PF01380 SIS domain 109 229 3.1E-14 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BAMF_2514 96f007f05b94b1e9cb60156c3c507ba4 241 SUPERFAMILY SSF53697 77 240 5.56E-29 T 12-10-2018 BAMF_0807 2d295548b61f1b34316e2b78d42c8ce7 63 Pfam PF14151 YfhD-like protein 1 61 7.7E-26 T 12-10-2018 IPR025435 YfhD-like protein BAMF_0807 2d295548b61f1b34316e2b78d42c8ce7 63 ProDom PD053407 YFHD 1 63 5.0E-25 T 12-10-2018 BAMF_1726 1299bcea3837f53900b8d59019d856d7 262 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 219 245 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 BAMF_1726 1299bcea3837f53900b8d59019d856d7 262 Pfam PF01148 Cytidylyltransferase family 2 261 3.1E-73 T 12-10-2018 BAMF_2718 a98d71b635e569654f26df780a7c4c57 154 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 21 131 1.0E-41 T 12-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame BAMF_2718 a98d71b635e569654f26df780a7c4c57 154 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 149 19.026 T 12-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame BAMF_2718 a98d71b635e569654f26df780a7c4c57 154 Pfam PF04284 Protein of unknown function (DUF441) 7 146 9.4E-48 T 12-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame BAMF_2249 820a592be0c0029645cb27c6ff2efb0c 214 PIRSF PIRSF038973 1 214 7.0E-71 T 12-10-2018 IPR014196 Stage II sporulation protein M BAMF_2249 820a592be0c0029645cb27c6ff2efb0c 214 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 10 207 2.7E-80 T 12-10-2018 IPR014196 Stage II sporulation protein M BAMF_2249 820a592be0c0029645cb27c6ff2efb0c 214 Pfam PF01944 Stage II sporulation protein M 25 203 5.0E-27 T 12-10-2018 IPR002798 Stage II sporulation protein M-like BAMF_2583 9a78b1930e38300e07553ccd0c3f0fbe 66 Pfam PF11146 Protein of unknown function (DUF2905) 6 62 1.1E-22 T 12-10-2018 IPR021320 Protein of unknown function DUF2905 BAMF_3671 b416c8907e5c9b5a7f458fbded409aee 67 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 5 65 4.5E-34 T 12-10-2018 IPR019240 Protein of unknown function DUF2196 BAMF_3671 b416c8907e5c9b5a7f458fbded409aee 67 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 5 65 1.7E-32 T 12-10-2018 IPR019240 Protein of unknown function DUF2196 BAMF_2012 5d844616db033e4d7a61a674c296cc06 196 SUPERFAMILY SSF49329 45 188 4.32E-36 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BAMF_2012 5d844616db033e4d7a61a674c296cc06 196 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 51 187 1.8E-34 T 12-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BAMF_2012 5d844616db033e4d7a61a674c296cc06 196 Gene3D G3DSA:2.60.40.200 40 194 6.8E-55 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BAMF_3366 94b71bec2d2e05de7bbd863f128ffc81 296 Pfam PF02687 FtsX-like permease family 199 292 3.3E-8 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BAMF_3366 94b71bec2d2e05de7bbd863f128ffc81 296 Gene3D G3DSA:3.30.70.3040 50 156 1.4E-8 T 12-10-2018 BAMF_3366 94b71bec2d2e05de7bbd863f128ffc81 296 PIRSF PIRSF003097 1 296 1.7E-96 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 BAMF_0613 57dbcee78c44e7b0c887b99e26453981 334 SUPERFAMILY SSF117892 91 226 7.45E-5 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily BAMF_0613 57dbcee78c44e7b0c887b99e26453981 334 Pfam PF13421 SPFH domain-Band 7 family 27 231 1.2E-44 T 12-10-2018 IPR033880 SPFH domain, YdjI-like BAMF_0613 57dbcee78c44e7b0c887b99e26453981 334 Pfam PF13248 zinc-ribbon domain 311 333 9.0E-8 T 12-10-2018 BAMF_3289 5882ed81c66ecd41934ba05175e18ce7 235 Pfam PF02706 Chain length determinant protein 4 93 4.8E-15 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 BAMF_1653 1aa3f7358ca691b9e2fe41b2eaf6e1f8 26 Pfam PF08183 Stage V sporulation protein family 1 25 4.0E-18 T 12-10-2018 IPR012609 Sporulation stage V, protein M BAMF_2403 c9402580d99f868641349b35c35923de 254 Pfam PF06691 Protein of unknown function (DUF1189) 5 244 7.5E-66 T 12-10-2018 IPR009574 Protein of unknown function DUF1189 BAMF_2719 5ffa61e3b7f766e95254ef0d05cdb778 371 Pfam PF01594 AI-2E family transporter 22 356 2.1E-71 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like BAMF_2719 5ffa61e3b7f766e95254ef0d05cdb778 371 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 11 359 7.6E-112 T 12-10-2018 IPR014227 Putative transport protein YtvI-like BAMF_1313 a597bc172440bed0a50589697861e0d4 111 Gene3D G3DSA:3.40.50.740 1 76 3.4E-19 T 12-10-2018 BAMF_1313 a597bc172440bed0a50589697861e0d4 111 SUPERFAMILY SSF53706 1 105 8.14E-22 T 12-10-2018 BAMF_1036 5f09893d0f3e5819bec3a2961fc67a30 468 Pfam PF04293 SpoVR like protein 5 406 1.8E-164 T 12-10-2018 IPR007390 Sporulation stage V, protein R BAMF_3884 11704969ed3068c3eaedc5380e931ed4 406 Pfam PF07690 Major Facilitator Superfamily 17 320 5.4E-13 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_3884 11704969ed3068c3eaedc5380e931ed4 406 SUPERFAMILY SSF103473 4 395 2.49E-29 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_3884 11704969ed3068c3eaedc5380e931ed4 406 Gene3D G3DSA:1.20.1250.20 1 393 1.2E-23 T 12-10-2018 BAMF_2222 29849e1ba24b68582c45109399c83916 173 Pfam PF03745 Domain of unknown function (DUF309) 9 66 1.1E-22 T 12-10-2018 IPR005500 Protein of unknown function DUF309 BAMF_2222 29849e1ba24b68582c45109399c83916 173 SUPERFAMILY SSF140663 2 128 2.09E-33 T 12-10-2018 IPR023203 TTHA0068-like superfamily BAMF_2222 29849e1ba24b68582c45109399c83916 173 Gene3D G3DSA:1.20.58.500 6 99 6.3E-15 T 12-10-2018 BAMF_2603 f10322915646d38151019de7078d368a 288 Pfam PF02163 Peptidase family M50 112 148 1.9E-6 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 BAMF_2510 cd69385b943be3ad5104d7b21d0386bb 94 Pfam PF10852 Protein of unknown function (DUF2651) 17 86 4.7E-11 T 12-10-2018 IPR020258 Uncharacterised protein family YbeF BAMF_0497 225ded98d6e2db3bb91bc52e6e726e49 285 PIRSF PIRSF006483 1 277 5.8E-73 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BAMF_0497 225ded98d6e2db3bb91bc52e6e726e49 285 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 7 211 7.5E-56 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BAMF_0497 225ded98d6e2db3bb91bc52e6e726e49 285 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 218 270 9.3E-18 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 BAMF_0497 225ded98d6e2db3bb91bc52e6e726e49 285 Gene3D G3DSA:3.30.70.120 188 263 2.5E-19 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BAMF_3531 a17d54beda61361a47d118dfaf605d7e 185 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 7 185 22.17 T 12-10-2018 IPR022929 Putative manganese efflux pump MntP BAMF_3531 a17d54beda61361a47d118dfaf605d7e 185 Pfam PF02659 Putative manganese efflux pump 35 182 4.4E-40 T 12-10-2018 IPR003810 Putative manganese efflux pump BAMF_3535 1665277393aeb689ad50612af38a392b 124 Pfam PF17094 Uncharacterised protein family (UPF0715) 3 115 3.8E-36 T 12-10-2018 IPR031374 Uncharacterised protein family UPF0715 BAMF_3535 1665277393aeb689ad50612af38a392b 124 ProDom PD015812 YOPD YWLA YOAG 3 116 5.0E-38 T 12-10-2018 IPR031374 Uncharacterised protein family UPF0715 BAMF_0618 fa293023b4c7f086d0c36e9d703df6d2 122 Pfam PF03330 Lytic transglycolase 30 117 9.4E-9 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain BAMF_2115 06b0e9afec48af918ae4809ddff5af2e 50 Pfam PF14139 YpzG-like protein 1 49 4.8E-26 T 12-10-2018 IPR025413 YpzG-like protein BAMF_0029 4709e947cb18fc7e64d560bbf8e27389 109 Gene3D G3DSA:3.30.70.120 1 103 1.3E-43 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BAMF_0029 4709e947cb18fc7e64d560bbf8e27389 109 Pfam PF06153 Cyclic-di-AMP receptor 1 109 3.5E-54 T 12-10-2018 IPR010375 Cyclic-di-AMP receptor BAMF_0029 4709e947cb18fc7e64d560bbf8e27389 109 SUPERFAMILY SSF54913 1 107 6.45E-12 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BAMF_3869 8f628437fcb0fa09e81fee2e72bd2576 442 Pfam PF00534 Glycosyl transferases group 1 251 412 6.1E-37 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 BAMF_3869 8f628437fcb0fa09e81fee2e72bd2576 442 Gene3D G3DSA:3.40.50.2000 242 419 5.0E-75 T 12-10-2018 BAMF_3869 8f628437fcb0fa09e81fee2e72bd2576 442 Pfam PF13439 Glycosyltransferase Family 4 66 244 1.2E-18 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BAMF_3869 8f628437fcb0fa09e81fee2e72bd2576 442 SUPERFAMILY SSF53756 54 436 3.1E-80 T 12-10-2018 BAMF_3869 8f628437fcb0fa09e81fee2e72bd2576 442 Gene3D G3DSA:3.40.50.2000 66 429 5.0E-75 T 12-10-2018 BAMF_1071 8d522cea6a1784cd8c554d1bf916ed10 377 PIRSF PIRSF032178 1 377 6.1E-136 T 12-10-2018 IPR016991 Protein of unknown function UCP032178 BAMF_1071 8d522cea6a1784cd8c554d1bf916ed10 377 Pfam PF04286 Protein of unknown function (DUF445) 12 376 2.2E-83 T 12-10-2018 IPR007383 Protein of unknown function DUF445 BAMF_0823 7a84443f4e7ee78a8ccaab8e3424b2e6 861 Pfam PF09586 Bacterial membrane protein YfhO 14 842 3.0E-183 T 12-10-2018 IPR018580 Uncharacterised protein family YfhO BAMF_3627 2f834c91d0a89293d5b686b2ae155f2d 183 TIGRFAM TIGR02728 spore_gerQ: spore coat protein GerQ 94 175 1.1E-47 T 12-10-2018 IPR014099 Spore coat protein GerQ BAMF_3627 2f834c91d0a89293d5b686b2ae155f2d 183 Pfam PF09671 Spore coat protein (Spore_GerQ) 96 171 3.1E-41 T 12-10-2018 IPR014099 Spore coat protein GerQ BAMF_3627 2f834c91d0a89293d5b686b2ae155f2d 183 PIRSF PIRSF038931 1 63 41.0 T 12-10-2018 IPR014099 Spore coat protein GerQ BAMF_3627 2f834c91d0a89293d5b686b2ae155f2d 183 PIRSF PIRSF038931 20 183 6.6E-53 T 12-10-2018 IPR014099 Spore coat protein GerQ BAMF_3670 c25fd52d19782534ef971e73137fb7de 226 Pfam PF04172 LrgB-like family 11 223 1.6E-71 T 12-10-2018 IPR007300 CidB/LrgB family BAMF_3670 c25fd52d19782534ef971e73137fb7de 226 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 2 223 3.0E-96 T 12-10-2018 IPR005261 Conserved hypothetical protein CHP00659 BAMF_3449 cbaa2a17735e06a83eeb00834eff38e6 291 ProDom PD210561 YWRJ 15 140 0.002 T 12-10-2018 IPR020173 Uncharacterised protein family YwrJ BAMF_0062 a7eda83343c5f67bc4d97ab6c48108cf 125 Pfam PF04977 Septum formation initiator 46 122 3.5E-17 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC BAMF_2885 a6d197b89ad6a359183432e7fa8910c7 96 SUPERFAMILY SSF47661 3 78 6.28E-5 T 12-10-2018 IPR010989 SNARE GO:0016020|GO:0016192 BAMF_1137 19e52618986dd7dcdec5a0fa1f0438c9 66 Pfam PF11755 Protein of unknown function (DUF3311) 6 64 4.9E-22 T 12-10-2018 IPR021741 Protein of unknown function DUF3311 BAMF_1315 5a03f7d17e29755e03a5f67c73abd4b8 327 Pfam PF13536 Putative multidrug resistance efflux transporter 38 305 1.5E-106 T 12-10-2018 IPR032713 Putative multidrug resistance efflux transporter BAMF_3146 fb56a846f79cd3bdfa12179907e82e26 480 PIRSF PIRSF005690 1 480 3.2E-174 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BAMF_3146 fb56a846f79cd3bdfa12179907e82e26 480 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 21 467 2.4E-164 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BAMF_1370 a683e066db0de79cb910ffe75f2da37f 56 Pfam PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system 1 56 2.3E-30 T 12-10-2018 IPR025897 Antitoxin SpoIISB BAMF_1370 a683e066db0de79cb910ffe75f2da37f 56 Gene3D G3DSA:1.20.5.740 34 56 1.2E-15 T 12-10-2018 BAMF_2204 9cac42e0d5624f7e732310e411455774 352 PIRSF PIRSF021350 4 352 8.6E-107 T 12-10-2018 IPR008308 Uncharacterised conserved protein UCP021350 BAMF_2204 9cac42e0d5624f7e732310e411455774 352 Pfam PF14493 Helix-turn-helix domain 256 344 2.3E-20 T 12-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BAMF_0765 819f33c1d36063717795a64d76430fbe 277 SUPERFAMILY SSF82861 15 99 1.57E-9 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BAMF_0765 819f33c1d36063717795a64d76430fbe 277 Gene3D G3DSA:3.30.70.100 168 265 3.3E-8 T 12-10-2018 BAMF_0765 819f33c1d36063717795a64d76430fbe 277 SUPERFAMILY SSF50182 101 161 9.81E-11 T 12-10-2018 IPR010920 LSM domain superfamily BAMF_0765 819f33c1d36063717795a64d76430fbe 277 Pfam PF00924 Mechanosensitive ion channel 59 265 1.7E-31 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BAMF_0765 819f33c1d36063717795a64d76430fbe 277 Gene3D G3DSA:2.30.30.60 116 165 1.1E-17 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BAMF_2833 9e5c9e549f3245ad3ee4911650ae7da0 359 Pfam PF10776 Protein of unknown function (DUF2600) 20 348 8.2E-152 T 12-10-2018 IPR019712 Protein of unknown function DUF2600 BAMF_2270 0e88195552382fcbd17ff61cad7f4ed7 69 Pfam PF14164 YqzH-like protein 2 64 3.8E-27 T 12-10-2018 IPR025546 YqzH-like protein BAMF_1005 2fc29a51a8e36f6656e6791b3d622865 315 Pfam PF12679 ABC-2 family transporter protein 3 313 6.9E-18 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 BAMF_2264 1ac37f81d24d635ec8ce65976cd037f0 120 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 104 1.2E-23 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BAMF_2264 1ac37f81d24d635ec8ce65976cd037f0 120 Gene3D G3DSA:2.60.300.12 1 120 5.2E-6 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BAMF_2264 1ac37f81d24d635ec8ce65976cd037f0 120 SUPERFAMILY SSF89360 1 105 4.32E-24 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BAMF_3796 48063e626496c2bb2a0a1d5d83e68bbc 349 Pfam PF00487 Fatty acid desaturase 57 297 5.2E-35 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 BAMF_3435 a85c6e1f09d0b4eab06257be766cad32 234 Gene3D G3DSA:3.30.300.210 80 234 2.1E-17 T 12-10-2018 IPR038501 Spore germination GerAC superfamily BAMF_3435 a85c6e1f09d0b4eab06257be766cad32 234 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 63 231 2.7E-21 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 BAMF_2096 af9fd3e6371e5906d2a10adfa9f99a80 60 Pfam PF10782 Zinc-finger 2 58 4.2E-29 T 12-10-2018 IPR019718 Protein of unknown function DUF2602 BAMF_1566 88db287af2c724b0abdebe50adbb45f8 110 TIGRFAM TIGR02908 CoxD_Bacillus: cytochrome c oxidase, subunit IVB 1 110 4.9E-56 T 12-10-2018 IPR014257 Cytochrome c oxidase, subunit IV bacillaceae KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 BAMF_1566 88db287af2c724b0abdebe50adbb45f8 110 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 29 101 1.5E-12 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 BAMF_1035 2ceac165914fa621f64315a87ff724aa 505 Pfam PF05552 Conserved TM helix 189 237 5.6E-17 T 12-10-2018 IPR008910 Conserved TM helix BAMF_1035 2ceac165914fa621f64315a87ff724aa 505 Pfam PF05552 Conserved TM helix 285 332 2.2E-11 T 12-10-2018 IPR008910 Conserved TM helix BAMF_1035 2ceac165914fa621f64315a87ff724aa 505 Pfam PF05552 Conserved TM helix 383 421 8.3E-7 T 12-10-2018 IPR008910 Conserved TM helix BAMF_1035 2ceac165914fa621f64315a87ff724aa 505 Pfam PF05552 Conserved TM helix 5 49 7.4E-13 T 12-10-2018 IPR008910 Conserved TM helix BAMF_0940 32d330e469145a67d22d0e58bf8fef4c 543 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 35 510 1.2E-12 T 12-10-2018 IPR021145 Portal protein BAMF_2340 ea0e7f4dfee00df18f68b319afbe5178 221 Gene3D G3DSA:3.30.300.270 106 221 3.4E-38 T 12-10-2018 IPR038503 Stage III sporulation protein AH-like superfamily BAMF_2340 ea0e7f4dfee00df18f68b319afbe5178 221 Pfam PF12685 SpoIIIAH-like protein 5 208 1.2E-40 T 12-10-2018 IPR024232 Stage III sporulation protein AH-like BAMF_1556 d6f832b648f407a0c45aceb37d628475 158 ProDom PD094668 YLAL SIMILAR MW0994 BH2628 SE0810 SA0960 3 157 5.0E-52 T 12-10-2018 IPR020229 Uncharacterised protein YlaL BAMF_1828 a5c2c0a59877f144407bae72e392b62b 407 Pfam PF07690 Major Facilitator Superfamily 19 355 2.1E-22 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_1828 a5c2c0a59877f144407bae72e392b62b 407 PRINTS PR01988 Putative bacilysin exporter bacE signature 144 165 1.4E-6 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_1828 a5c2c0a59877f144407bae72e392b62b 407 PRINTS PR01988 Putative bacilysin exporter bacE signature 171 188 1.4E-6 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_1828 a5c2c0a59877f144407bae72e392b62b 407 PRINTS PR01988 Putative bacilysin exporter bacE signature 362 385 1.4E-6 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_1828 a5c2c0a59877f144407bae72e392b62b 407 PRINTS PR01988 Putative bacilysin exporter bacE signature 53 71 1.4E-6 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_1828 a5c2c0a59877f144407bae72e392b62b 407 PRINTS PR01988 Putative bacilysin exporter bacE signature 258 275 1.4E-6 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BAMF_1828 a5c2c0a59877f144407bae72e392b62b 407 SUPERFAMILY SSF103473 10 393 1.31E-37 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_1828 a5c2c0a59877f144407bae72e392b62b 407 Gene3D G3DSA:1.20.1250.20 9 394 7.8E-30 T 12-10-2018 BAMF_1250 e1fddcfb39506afa00c01a4c30e07a11 166 Pfam PF07552 Spore Coat Protein X and V domain 46 101 3.2E-17 T 12-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 BAMF_1250 e1fddcfb39506afa00c01a4c30e07a11 166 Pfam PF07552 Spore Coat Protein X and V domain 108 163 3.0E-17 T 12-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 BAMF_2948 ca2196e6aa4fa08aad9a176c1f5cf6fd 381 Pfam PF07690 Major Facilitator Superfamily 2 244 2.0E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_2948 ca2196e6aa4fa08aad9a176c1f5cf6fd 381 SUPERFAMILY SSF103473 2 372 2.49E-62 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_2948 ca2196e6aa4fa08aad9a176c1f5cf6fd 381 Gene3D G3DSA:1.20.1250.20 1 176 6.5E-30 T 12-10-2018 BAMF_2948 ca2196e6aa4fa08aad9a176c1f5cf6fd 381 PRINTS PR01035 Tetracycline resistance protein signature 259 280 1.7E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_2948 ca2196e6aa4fa08aad9a176c1f5cf6fd 381 PRINTS PR01035 Tetracycline resistance protein signature 85 106 1.7E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_2948 ca2196e6aa4fa08aad9a176c1f5cf6fd 381 PRINTS PR01035 Tetracycline resistance protein signature 320 343 1.7E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_2948 ca2196e6aa4fa08aad9a176c1f5cf6fd 381 PRINTS PR01035 Tetracycline resistance protein signature 27 46 1.7E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_2948 ca2196e6aa4fa08aad9a176c1f5cf6fd 381 PRINTS PR01035 Tetracycline resistance protein signature 115 137 1.7E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_2948 ca2196e6aa4fa08aad9a176c1f5cf6fd 381 PRINTS PR01035 Tetracycline resistance protein signature 58 82 1.7E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BAMF_2948 ca2196e6aa4fa08aad9a176c1f5cf6fd 381 Gene3D G3DSA:1.20.1250.20 191 378 3.8E-23 T 12-10-2018 BAMF_1538 75e6e885612cfbcebb4e7a6148ab4d53 267 Pfam PF01522 Polysaccharide deacetylase 74 194 1.0E-24 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BAMF_1538 75e6e885612cfbcebb4e7a6148ab4d53 267 Gene3D G3DSA:3.20.20.370 21 264 3.5E-47 T 12-10-2018 BAMF_1538 75e6e885612cfbcebb4e7a6148ab4d53 267 SUPERFAMILY SSF88713 49 264 5.68E-41 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BAMF_2519 541b3b0241641bc867445252580a81f3 160 Pfam PF04073 Aminoacyl-tRNA editing domain 39 149 2.5E-23 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BAMF_2519 541b3b0241641bc867445252580a81f3 160 Gene3D G3DSA:3.90.960.10 1 160 3.8E-49 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BAMF_2519 541b3b0241641bc867445252580a81f3 160 SUPERFAMILY SSF55826 8 159 1.96E-37 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BAMF_2519 541b3b0241641bc867445252580a81f3 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 8 159 2.4E-55 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BAMF_2519 541b3b0241641bc867445252580a81f3 160 PIRSF PIRSF006181 3 160 2.2E-58 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BAMF_1018 ef5d64bfd1fb78b88b02e132fd8356a2 131 ProDom PD081567 YHCU 8 116 1.0E-34 T 12-10-2018 IPR020355 Uncharacterised protein family YhcU BAMF_1018 ef5d64bfd1fb78b88b02e132fd8356a2 131 Pfam PF17326 Family of unknown function (DUF5365) 8 118 3.1E-38 T 12-10-2018 IPR020355 Uncharacterised protein family YhcU BAMF_1317 e97a7951fd21a080ca15231d493fa80b 138 Pfam PF07849 Protein of unknown function (DUF1641) 101 121 1.0E-5 T 12-10-2018 IPR012440 Protein of unknown function DUF1641 BAMF_3585 047f4885fd052c050acdce343e5c63ea 74 Pfam PF07293 Protein of unknown function (DUF1450) 7 73 6.5E-10 T 12-10-2018 IPR009910 Protein of unknown function DUF1450 BAMF_3585 047f4885fd052c050acdce343e5c63ea 74 Hamap MF_01863 UPF0741 protein . 1 74 33.318 T 12-10-2018 IPR020880 Protein of unknown function UPF0741 BAMF_1507 d858759e0ad8e3b9a93115ca4e1839af 77 Pfam PF02597 ThiS family 4 77 8.8E-14 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 BAMF_1507 d858759e0ad8e3b9a93115ca4e1839af 77 Gene3D G3DSA:3.10.20.30 1 77 8.7E-20 T 12-10-2018 IPR012675 Beta-grasp domain superfamily BAMF_1507 d858759e0ad8e3b9a93115ca4e1839af 77 SUPERFAMILY SSF54285 1 77 4.11E-15 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BAMF_1507 d858759e0ad8e3b9a93115ca4e1839af 77 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 77 1.7E-22 T 12-10-2018 BAMF_1890 c44279514641beff5843e5f9671ef99e 80 Hamap MF_01506 Small, acid-soluble spore protein Tlp [tlp]. 1 80 33.425 T 12-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like BAMF_1890 c44279514641beff5843e5f9671ef99e 80 TIGRFAM TIGR03090 SASP_tlp: small, acid-soluble spore protein tlp 8 74 2.9E-29 T 12-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like BAMF_1767 bcf914459af2c18ae0840c0ad8db726d 393 Pfam PF00144 Beta-lactamase 97 384 4.3E-51 T 12-10-2018 IPR001466 Beta-lactamase-related BAMF_1767 bcf914459af2c18ae0840c0ad8db726d 393 SUPERFAMILY SSF56601 84 375 2.42E-74 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BAMF_1767 bcf914459af2c18ae0840c0ad8db726d 393 Gene3D G3DSA:3.40.710.10 82 384 1.4E-72 T 12-10-2018 BAMF_3011 7e58f7c8d6956163306b3f2459231566 175 Pfam PF01944 Stage II sporulation protein M 20 172 2.3E-23 T 12-10-2018 IPR002798 Stage II sporulation protein M-like BAMF_2840 b38e5a30c560f6d560fcbbd8984a20d5 80 SUPERFAMILY SSF88697 1 80 2.93E-31 T 12-10-2018 IPR015947 PUA-like superfamily BAMF_2840 b38e5a30c560f6d560fcbbd8984a20d5 80 Pfam PF10763 Protein of unknown function (DUF2584) 1 80 1.7E-37 T 12-10-2018 IPR019699 Protein of unknown function DUF2584 BAMF_2840 b38e5a30c560f6d560fcbbd8984a20d5 80 Gene3D G3DSA:2.40.240.20 1 77 1.8E-36 T 12-10-2018 BAMF_1499 ebe147b89335e48079416e82791e607d 102 SUPERFAMILY SSF52833 2 91 1.31E-16 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_1499 ebe147b89335e48079416e82791e607d 102 Gene3D G3DSA:3.40.30.10 1 98 1.4E-20 T 12-10-2018 BAMF_1316 16e05820dd33b61ab204dcb7e6282112 165 Gene3D G3DSA:2.60.120.10 37 133 5.1E-11 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_1316 16e05820dd33b61ab204dcb7e6282112 165 Pfam PF07883 Cupin domain 55 107 4.1E-8 T 12-10-2018 IPR013096 Cupin 2, conserved barrel BAMF_1316 16e05820dd33b61ab204dcb7e6282112 165 PIRSF PIRSF019307 1 165 8.3E-61 T 12-10-2018 IPR014500 Uncharacterised conserved protein UCP019307, cupin-type BAMF_1316 16e05820dd33b61ab204dcb7e6282112 165 SUPERFAMILY SSF51182 9 127 1.19E-17 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BAMF_0394 045e46cea127bb16f09917ff55ab87e5 361 SUPERFAMILY SSF48208 8 352 2.26E-46 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BAMF_0394 045e46cea127bb16f09917ff55ab87e5 361 Gene3D G3DSA:1.50.10.10 27 355 2.1E-93 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BAMF_2351 9d355d99e74c2df118d3a553c05585a3 176 ProDom PD101610 MEMBRANE YQHR BH2802 TRANSMEMBRANE IG 21 163 5.0E-57 T 12-10-2018 IPR024563 Uncharacterised protein family YqhR BAMF_2351 9d355d99e74c2df118d3a553c05585a3 176 Pfam PF11085 Conserved membrane protein YqhR 8 171 2.2E-72 T 12-10-2018 IPR024563 Uncharacterised protein family YqhR BAMF_2887 f51d7fa5d79b225845c20c4f66e8a320 101 Pfam PF07252 Protein of unknown function (DUF1433) 21 69 5.7E-10 T 12-10-2018 IPR009881 Protein of unknown function DUF1433 BAMF_2887 f51d7fa5d79b225845c20c4f66e8a320 101 Gene3D G3DSA:3.10.450.130 19 97 2.6E-10 T 12-10-2018 BAMF_1799 ada21ab20049fbafab7e04b566d7bb07 104 Gene3D G3DSA:1.10.3730.20 3 104 5.5E-30 T 12-10-2018 BAMF_1799 ada21ab20049fbafab7e04b566d7bb07 104 SUPERFAMILY SSF103481 7 104 6.93E-17 T 12-10-2018 BAMF_1799 ada21ab20049fbafab7e04b566d7bb07 104 Pfam PF00893 Small Multidrug Resistance protein 4 93 5.4E-27 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BAMF_0749 ea774ba82d488414b24c9c19998c9fcd 221 SUPERFAMILY SSF55469 7 220 9.16E-55 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BAMF_0749 ea774ba82d488414b24c9c19998c9fcd 221 Gene3D G3DSA:3.40.109.10 3 221 7.5E-61 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BAMF_0749 ea774ba82d488414b24c9c19998c9fcd 221 Pfam PF00881 Nitroreductase family 14 201 1.5E-27 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BAMF_1282 86896268c079567daf6f60069e50521d 124 Pfam PF14037 YoqO-like protein 3 115 1.3E-25 T 12-10-2018 IPR025621 YoqO-like protein BAMF_1947 06203919d620b79752da6000ee6ff4f1 391 Pfam PF07690 Major Facilitator Superfamily 10 343 2.2E-37 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BAMF_1947 06203919d620b79752da6000ee6ff4f1 391 Gene3D G3DSA:1.20.1250.20 2 377 6.7E-48 T 12-10-2018 BAMF_1947 06203919d620b79752da6000ee6ff4f1 391 SUPERFAMILY SSF103473 5 376 7.32E-57 T 12-10-2018 IPR036259 MFS transporter superfamily BAMF_0856 bcc7aa946f7cfd4fa256cd74bb3fcaa3 1918 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 264 623 1.3E-59 T 12-10-2018 IPR010090 Phage tail tape measure protein BAMF_0856 bcc7aa946f7cfd4fa256cd74bb3fcaa3 1918 Pfam PF10145 Phage-related minor tail protein 309 514 8.3E-38 T 12-10-2018 IPR010090 Phage tail tape measure protein BAMF_2588 46e325552544a2e552202b4750de833c 134 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 2 133 3.5E-19 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like BAMF_2963 d171b111310f918aa09d41992e813911 158 Pfam PF01899 Na+/H+ ion antiporter subunit 8 156 2.2E-44 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 BAMF_2963 d171b111310f918aa09d41992e813911 158 PIRSF PIRSF019239 1 158 2.8E-51 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 BAMF_2232 a083add46e53b7a67228cccd74e9f462 299 Pfam PF06207 Protein of unknown function (DUF1002) 35 253 2.5E-77 T 12-10-2018 IPR009343 Protein of unknown function DUF1002 BAMF_1448 f2f0b7a7915291f3728ff91d6fc98a26 271 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 186 203 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site BAMF_1448 f2f0b7a7915291f3728ff91d6fc98a26 271 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 219 7.3E-28 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BAMF_2235 6e9b706a6055b11c4f78675c950c033a 201 Pfam PF14097 Stage V sporulation protein AE1 5 184 3.2E-83 T 12-10-2018 IPR025914 Stage V sporulation protein AE BAMF_3350 925d68a8b9246fb073e893c94c3c30d1 119 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 3 106 1.5E-27 T 12-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV BAMF_2045 57eede8577eaa180e945dfa1b835c3e4 132 Gene3D G3DSA:3.10.180.10 1 125 1.3E-18 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_2045 57eede8577eaa180e945dfa1b835c3e4 132 SUPERFAMILY SSF54593 1 125 1.83E-17 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BAMF_2045 57eede8577eaa180e945dfa1b835c3e4 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 120 1.2E-7 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BAMF_1332 518af7e54c11b9d8e17c57dc1e0be7e3 196 Pfam PF06114 IrrE N-terminal-like domain 33 147 1.8E-17 T 12-10-2018 IPR010359 IrrE N-terminal-like domain BAMF_2297 11463268f0adec33a8840e72ea5dbf7b 255 SMART SM00079 33 253 5.7E-6 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 BAMF_2297 11463268f0adec33a8840e72ea5dbf7b 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 252 9.0E-64 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BAMF_2297 11463268f0adec33a8840e72ea5dbf7b 255 SMART SM00062 33 254 1.0E-78 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BAMF_2297 11463268f0adec33a8840e72ea5dbf7b 255 Gene3D G3DSA:3.40.190.10 35 251 5.3E-69 T 12-10-2018 BAMF_2297 11463268f0adec33a8840e72ea5dbf7b 255 SUPERFAMILY SSF53850 1 253 1.32E-70 T 12-10-2018 BAMF_2297 11463268f0adec33a8840e72ea5dbf7b 255 Gene3D G3DSA:3.40.190.10 118 211 5.3E-69 T 12-10-2018 BAMF_0631 50259b5ad6e426e5718dfb6d0fd6f4b5 440 PIRSF PIRSF005353 1 440 4.1E-173 T 12-10-2018 IPR026033 Purine permease PbuG-like BAMF_0631 50259b5ad6e426e5718dfb6d0fd6f4b5 440 Pfam PF00860 Permease family 16 402 1.5E-47 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BAMF_0379 16020366eda0a63839d19577f070efad 81 Pfam PF13129 Protein of unknown function (DUF3953) 34 73 3.3E-13 T 12-10-2018 IPR025018 Protein of unknown function DUF3953 BAMF_1180 110d039878858ced850b034c2994c740 436 Pfam PF00067 Cytochrome P450 278 388 3.4E-17 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1180 110d039878858ced850b034c2994c740 436 SUPERFAMILY SSF48264 11 404 6.55E-67 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1180 110d039878858ced850b034c2994c740 436 Gene3D G3DSA:1.10.630.10 1 415 9.5E-174 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1180 110d039878858ced850b034c2994c740 436 PRINTS PR00463 E-class P450 group I signature 363 386 1.0E-7 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1180 110d039878858ced850b034c2994c740 436 PRINTS PR00463 E-class P450 group I signature 317 341 1.0E-7 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_1180 110d039878858ced850b034c2994c740 436 PRINTS PR00463 E-class P450 group I signature 251 277 1.0E-7 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 BAMF_3279 98681d5a91adfe22c34e26fa9492b3b2 531 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 372 508 2.9E-8 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BAMF_3279 98681d5a91adfe22c34e26fa9492b3b2 531 Pfam PF01943 Polysaccharide biosynthesis protein 35 310 8.4E-13 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 BAMF_3723 785e89e082f607d141bf6ce0c7d963c3 158 Gene3D G3DSA:3.20.90.20 2 153 4.2E-12 T 12-10-2018 IPR038595 LURP-one-related superfamily BAMF_3723 785e89e082f607d141bf6ce0c7d963c3 158 Pfam PF04525 LURP-one-related 5 148 1.2E-21 T 12-10-2018 IPR007612 LURP-one-related BAMF_3723 785e89e082f607d141bf6ce0c7d963c3 158 SUPERFAMILY SSF54518 3 152 1.73E-32 T 12-10-2018 IPR025659 Tubby-like, C-terminal BAMF_0741 eb99323e4f8cf236e8ba3725ebbfde83 125 Pfam PF09350 Domain of unknown function (DUF1992) 8 70 1.6E-19 T 12-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain BAMF_1253 9b13ad08d32c32c7b6ff6588472bc668 118 Pfam PF07098 Protein of unknown function (DUF1360) 10 112 5.3E-36 T 12-10-2018 IPR010773 Mycobacterium phage PG1, Gp7 BAMF_0580 4823aae3a7da3eaba26056f966420818 307 Pfam PF04233 Phage Mu protein F like protein 146 265 9.4E-23 T 12-10-2018 IPR006528 Phage head morphogenesis domain BAMF_0796 24552ea5afd1518ebe772222b25a8499 144 Pfam PF01040 UbiA prenyltransferase family 1 121 7.2E-22 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BAMF_1876 bfb8043825b903be8a7d7b5496ea2b44 148 Pfam PF10747 Sporulation inhibitor of replication protein SirA 3 143 2.2E-44 T 12-10-2018 IPR019683 Sporulation inhibitor of replication protein SirA BAMF_1876 bfb8043825b903be8a7d7b5496ea2b44 148 Gene3D G3DSA:3.30.310.250 1 148 5.9E-55 T 12-10-2018 IPR038449 SirA superfamily BAMF_1252 3413996e6c5ec3da68556ab7baf85920 98 Pfam PF07552 Spore Coat Protein X and V domain 6 63 8.6E-17 T 12-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 BAMF_3193 9358d5c559bc137aa3042d8d68d4e758 202 Pfam PF03458 UPF0126 domain 5 78 1.2E-18 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 BAMF_3193 9358d5c559bc137aa3042d8d68d4e758 202 Pfam PF03458 UPF0126 domain 92 162 2.6E-18 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 BAMF_3114 5de793fd34e47c922217f10efb1fa07c 222 SUPERFAMILY SSF161098 13 209 2.88E-44 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3114 5de793fd34e47c922217f10efb1fa07c 222 Gene3D G3DSA:1.10.3720.10 9 221 1.6E-45 T 12-10-2018 IPR035906 MetI-like superfamily BAMF_3114 5de793fd34e47c922217f10efb1fa07c 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 222 7.1E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BAMF_0729 3cd1516232acef071d38487fc94a5806 432 TIGRFAM TIGR00784 citMHS: citrate transporter 2 431 8.9E-228 T 12-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 BAMF_0729 3cd1516232acef071d38487fc94a5806 432 Pfam PF03600 Citrate transporter 13 377 2.2E-44 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 BAMF_3664 ec43b8cb083e183685f1164c273b7973 383 Gene3D G3DSA:1.20.1420.20 140 383 5.2E-85 T 12-10-2018 IPR038352 Imelysin-like domain superfamily BAMF_3664 ec43b8cb083e183685f1164c273b7973 383 Pfam PF09375 Imelysin 149 375 6.2E-32 T 12-10-2018 IPR018976 Imelysin-like domain BAMF_0582 0a7a38df5dd05938d0fe76621e3f6d81 221 Pfam PF06810 Phage minor structural protein GP20 23 159 1.0E-43 T 12-10-2018 IPR009636 Capsid assembly scaffolding protein GO:0019069 BAMF_1304 312a40eafab0b73f5f6d30aa45414520 189 Pfam PF14172 Domain of unknown function (DUF4309) 49 186 2.0E-27 T 12-10-2018 IPR025453 Protein of unknown function DUF4309 BAMF_1904 7facd906a97dddc7e00e7dd857b9f189 202 Pfam PF13761 Domain of unknown function (DUF4166) 16 194 1.2E-49 T 12-10-2018 IPR025311 Domain of unknown function DUF4166 BAMF_2502 12377b717c431cbe432b1261e1fb50bb 123 SUPERFAMILY SSF46785 7 122 9.98E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BAMF_0681 13b22e5646b7ee2e3109d64cbd005a95 87 PIRSF PIRSF010606 1 87 2.2E-39 T 12-10-2018 IPR016571 Spore coat assembly protein CotJB BAMF_0681 13b22e5646b7ee2e3109d64cbd005a95 87 Pfam PF12652 CotJB protein 11 86 3.8E-28 T 12-10-2018 IPR024207 Spore coat assembly protein CotJB, domain BAMF_2213 33e8cc301283eca9546224a9ac3b3a06 542 Pfam PF05140 ResB-like family 63 426 5.7E-79 T 12-10-2018 IPR007816 ResB-like domain BAMF_2213 33e8cc301283eca9546224a9ac3b3a06 542 Pfam PF05140 ResB-like family 439 519 1.6E-19 T 12-10-2018 IPR007816 ResB-like domain BAMF_0436 9fa14336efcf1740cbef9137762ac412 159 Pfam PF03703 Bacterial PH domain 73 148 3.3E-16 T 12-10-2018 IPR005182 Domain of unknown function DUF304 BAMF_1136 47e1043e605ad7792fc5286c2a217424 489 Pfam PF00474 Sodium:solute symporter family 35 428 5.4E-21 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BAMF_1136 47e1043e605ad7792fc5286c2a217424 489 Gene3D G3DSA:1.20.1730.10 22 488 9.7E-31 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily BAMF_0008 4d145c80cba89ceb2a534981de9b02d9 316 Pfam PF14175 YaaC-like Protein 9 310 1.6E-105 T 12-10-2018 IPR026988 YaaC-like protein BAMF_3579 e8f751c3ca785466e8c5b26455c7c501 219 Pfam PF02163 Peptidase family M50 123 186 1.8E-8 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 BAMF_0733 1d84acb71618ec5c382c60898c6af43b 216 Pfam PF03475 3-alpha domain 170 210 1.4E-8 T 12-10-2018 IPR005163 3-alpha domain BAMF_0733 1d84acb71618ec5c382c60898c6af43b 216 Pfam PF03473 MOSC domain 49 155 3.0E-24 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 BAMF_0733 1d84acb71618ec5c382c60898c6af43b 216 Gene3D G3DSA:2.40.33.20 1 215 8.3E-72 T 12-10-2018 BAMF_0733 1d84acb71618ec5c382c60898c6af43b 216 SUPERFAMILY SSF50800 6 212 2.93E-67 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BAMF_1069 372ee0780cbf5d263c56193e4e45dc13 447 Pfam PF14398 YheC/D like ATP-grasp 180 434 3.3E-79 T 12-10-2018 IPR026838 Endospore coat-associated protein YheC/D BAMF_1069 372ee0780cbf5d263c56193e4e45dc13 447 SUPERFAMILY SSF56059 188 417 1.1E-13 T 12-10-2018 BAMF_1752 1c19bf09ed159ecc542591c59aea62df 69 Pfam PF14035 YlzJ-like protein 3 65 3.1E-22 T 12-10-2018 IPR025619 YlzJ-like protein BAMF_3204 93c5ea1eb46256b2e251f552574455b5 95 SUPERFAMILY SSF52833 5 64 1.07E-13 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BAMF_3204 93c5ea1eb46256b2e251f552574455b5 95 Gene3D G3DSA:3.40.30.10 6 86 2.7E-15 T 12-10-2018 BAMF_3204 93c5ea1eb46256b2e251f552574455b5 95 Pfam PF00462 Glutaredoxin 7 62 1.7E-14 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 BAMF_1936 f277f1e73f251c8b82b2ec38ff945770 514 Gene3D G3DSA:3.20.20.70 90 246 5.5E-9 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BAMF_1936 f277f1e73f251c8b82b2ec38ff945770 514 Pfam PF02638 Glycosyl hydrolase-like 10 37 358 2.8E-122 T 12-10-2018 IPR003790 Glycosyl hydrolase-like 10 BAMF_1936 f277f1e73f251c8b82b2ec38ff945770 514 SUPERFAMILY SSF51445 67 326 2.07E-24 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BAMF_0609 be2221973dd55bf7bcec352c684253a0 105 Pfam PF14154 Domain of unknown function (DUF4306) 7 90 8.2E-27 T 12-10-2018 IPR025440 Protein of unknown function DUF4306 BAMF_0396 8df50b5bc4006c6b8f3cc1ba0c143e49 574 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 215 479 3.7E-57 T 12-10-2018 IPR018763 Protein of unknown function DUF2334 BAMF_1376 e5f543a75150fb177839f08609c87631 715 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 65 223 1.3E-32 T 12-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like BAMF_0719 7f6ace1a0d4a7e38508fc373a0604732 246 Gene3D G3DSA:1.20.5.320 75 130 3.9E-6 T 12-10-2018 BAMF_2752 dc8995dee6d6bf6912241f1f59a24f11 446 Pfam PF05525 Branched-chain amino acid transport protein 8 432 3.5E-166 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 BAMF_2752 dc8995dee6d6bf6912241f1f59a24f11 446 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 420 3.5E-164 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 BAMF_2971 de4c9f0be6af4cf1a7bc5add44d6d137 46 ProDom PD014716 DEGQ ENZYME DEGRADATION SACQ REGULATORY REGULATION FACTOR 1 46 2.0E-18 T 12-10-2018 IPR012554 Degradation enzyme regulation protein DegQ GO:1900192 BAMF_2971 de4c9f0be6af4cf1a7bc5add44d6d137 46 Pfam PF08181 DegQ (SacQ) family 2 46 9.0E-29 T 12-10-2018 IPR012554 Degradation enzyme regulation protein DegQ GO:1900192 BAMF_3657 ebd381538acf230bb1004fe56da7c3fd 135 Pfam PF04138 GtrA-like protein 9 126 2.1E-26 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 BAMF_2098 b82f412bb195d921963f8b2acb51d7a4 226 Pfam PF02592 Putative vitamin uptake transporter 57 217 5.7E-46 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BAMF_2098 b82f412bb195d921963f8b2acb51d7a4 226 Hamap MF_02088 Probable queuosine precursor transporter. 26 226 16.9 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BAMF_2098 b82f412bb195d921963f8b2acb51d7a4 226 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 26 223 7.8E-72 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BAMF_2823 4efe4b1763760d7e10a31d6b403a8f4d 437 Pfam PF12704 MacB-like periplasmic core domain 22 269 3.6E-10 T 12-10-2018 IPR025857 MacB-like periplasmic core domain BAMF_2823 4efe4b1763760d7e10a31d6b403a8f4d 437 Pfam PF02687 FtsX-like permease family 325 428 2.3E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BAMF_3087 d38f1034bb34651e3e362bd2dabbcec3 198 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 25 171 3.5E-27 T 12-10-2018 IPR006433 Prohead protease BAMF_3087 d38f1034bb34651e3e362bd2dabbcec3 198 Pfam PF04586 Caudovirus prohead serine protease 16 177 9.8E-50 T 12-10-2018 IPR006433 Prohead protease BAMF_0304 2853c928e2e001c81a6c83631ee69f7a 144 Pfam PF06271 RDD family 6 128 9.4E-18 T 12-10-2018 IPR010432 RDD BAMF_2323 7edff61487f94f8e0789e97a7e99c08a 71 Pfam PF10676 Spore germination protein gerPA/gerPF 6 69 1.6E-14 T 12-10-2018 IPR019618 Spore germination protein GerPA/GerPF BAMF_1857 80d3d2053097678275fe292eb61a5afe 209 Pfam PF13021 Domain of unknown function (DUF3885) 178 209 8.0E-13 T 12-10-2018 IPR024976 Domain of unknown function DUF3885 BAMF_1208 5a0d529b6645224f3f232d0961186657 261 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 67 258 8.1E-61 T 12-10-2018 IPR018728 Domain of unknown function DUF2268 BAMF_0816 b4c53e99f9fe9a89ebae2de50b3fd83c 89 Pfam PF14043 WVELL protein 4 74 1.4E-36 T 12-10-2018 IPR026952 WVELL protein BAMF_3839 21db30a57c77434ef39b60f165d5a76c 250 SUPERFAMILY SSF54001 118 246 3.6E-16 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BAMF_2854 7ad2e91fd34e70b05cf7cb0ed2dce1df 464 PIRSF PIRSF006446 20 464 2.5E-115 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BAMF_2854 7ad2e91fd34e70b05cf7cb0ed2dce1df 464 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 27 454 3.2E-121 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BAMF_0878 8d6d51491f6cfe508b7a38e761da3c9b 354 Pfam PF06081 Aromatic acid exporter family member 1 1 142 2.3E-42 T 12-10-2018 IPR010343 Aromatic acid exporter family member 1 BAMF_1082 9b0cc85312b816412cf091633e3ea228 419 Pfam PF12698 ABC-2 family transporter protein 19 390 3.6E-54 T 12-10-2018 BAMF_1869 72869ab44aee847dae497d03be8ca69d 149 Pfam PF10710 Protein of unknown function (DUF2512) 1 138 5.4E-40 T 12-10-2018 IPR019649 Protein of unknown function DUF2512 BAMF_1581 ff13904f2284385dba8969bb9d86fb39 172 Pfam PF02620 Uncharacterized ACR, COG1399 56 165 1.4E-24 T 12-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD BAMF_1430 1255418a0b8318951b6b0e3fa41371f9 297 Hamap MF_00188 Protease HtpX [htpX]. 2 297 24.12 T 12-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 BAMF_1430 1255418a0b8318951b6b0e3fa41371f9 297 Gene3D G3DSA:3.30.2010.10 79 172 1.4E-30 T 12-10-2018 BAMF_1430 1255418a0b8318951b6b0e3fa41371f9 297 Pfam PF01435 Peptidase family M48 88 296 3.7E-39 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BAMF_3536 e938a35ca5a4b9db970a8fb1f51ba6db 92 Pfam PF17247 Family of unknown function (DUF5316) 29 91 1.1E-13 T 12-10-2018 IPR035167 Protein of unknown function DUF5316 BAMF_2573 37b7244ac0e4c27019111555dc2fd8d6 108 Pfam PF06305 Lipopolysaccharide assembly protein A domain 24 80 3.0E-15 T 12-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 BAMF_1247 596cb01d8f42184e92da3e0d498e31cd 195 Pfam PF14153 Spore coat protein CotO 6 195 7.0E-47 T 12-10-2018 IPR025439 Spore coat protein CotO BAMF_0538 d9acbbf81ac358780e688b8a019d81dd 244 Pfam PF02517 CAAX protease self-immunity 129 214 2.5E-16 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 BAMF_2177 059cc860fb1e65d4b726d59c46480144 254 Pfam PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 24 198 1.3E-72 T 12-10-2018 IPR009920 Heptaprenyl diphosphate synthase subunit 1 GO:0009234 KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 BAMF_3707 08ed790a5e7811222510f615443cd668 328 Gene3D G3DSA:3.60.60.10 2 328 1.1E-135 T 12-10-2018 BAMF_3707 08ed790a5e7811222510f615443cd668 328 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 2 315 7.9E-128 T 12-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal BAMF_3707 08ed790a5e7811222510f615443cd668 328 SUPERFAMILY SSF56235 2 327 6.4E-116 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BAMF_1281 aae9ed2d21560336f60fff7762286172 91 Pfam PF12197 Bacillus cereus group antimicrobial protein 53 87 5.4E-16 T 12-10-2018 IPR020976 Antimicrobial peptide, lci BAMF_1359 a7cb37c30ff5e709fd744d59ec26e30a 150 SUPERFAMILY SSF160719 46 135 4.71E-6 T 12-10-2018 BAMF_1359 a7cb37c30ff5e709fd744d59ec26e30a 150 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 20 144 2.0E-51 T 12-10-2018 IPR020288 Protein of unknown function DUF2634 BAMF_1359 a7cb37c30ff5e709fd744d59ec26e30a 150 Pfam PF10934 Protein of unknown function (DUF2634) 34 133 8.7E-26 T 12-10-2018 IPR020288 Protein of unknown function DUF2634 BAMF_2269 b77db359f91a52fba01dca5dd98d7dee 114 Pfam PF08863 YolD-like protein 20 111 9.7E-20 T 12-10-2018 IPR014962 YolD-like protein BAMF_1163 00aa1b104b0b2709f16e750552629dde 180 Pfam PF10949 Protein of unknown function (DUF2777) 3 171 2.7E-48 T 12-10-2018 IPR024488 Protein of unknown function DUF2777 BAMF_1163 00aa1b104b0b2709f16e750552629dde 180 ProDom PD106196 YISN IG BH1722 2 169 3.0E-48 T 12-10-2018 IPR024488 Protein of unknown function DUF2777 BAMF_0491 731c890862149adafae25132bdc753f6 122 Pfam PF07875 Coat F domain 19 79 1.7E-16 T 12-10-2018 IPR012851 Spore coat protein CotF-like BAMF_3098 078572c16de5a1a80802809b091d918f 392 Pfam PF10926 Protein of unknown function (DUF2800) 10 379 3.1E-149 T 12-10-2018 IPR021229 Protein of unknown function DUF2800 BAMF_2904 29595fba1d548855889950e3283e73dc 414 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 35 370 8.6E-78 T 12-10-2018 IPR006427 Phage portal protein, HK97 BAMF_2904 29595fba1d548855889950e3283e73dc 414 Pfam PF04860 Phage portal protein 45 365 1.5E-68 T 12-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein BAMF_2279 798a125e8d4c08e938475280ce6ad838 107 Pfam PF06942 GlpM protein 6 98 2.8E-9 T 12-10-2018 IPR009707 Membrane protein GlpM/YdgC BAMF_3080 ffa64965191ff0781f41b894016ee62e 192 Pfam PF04630 Phage tail tube protein 36 173 4.5E-5 T 12-10-2018 IPR006724 Phage tail tube protein 1 BAMF_3080 ffa64965191ff0781f41b894016ee62e 192 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 1 172 2.9E-39 T 12-10-2018 IPR006490 Phage major tail protein, phi13 family BAMF_0481 6ee2d45c8e5489db29bc5ab291bf79e7 429 Pfam PF03553 Na+/H+ antiporter family 73 209 1.5E-15 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BAMF_0481 6ee2d45c8e5489db29bc5ab291bf79e7 429 Pfam PF03553 Na+/H+ antiporter family 234 420 6.5E-12 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BAMF_3450 c3aa4287c4446c58cabfb502a9c1b85d 364 Pfam PF08757 CotH kinase protein 48 355 6.4E-87 T 12-10-2018 IPR014867 Spore coat protein CotH BAMF_2343 44cadb143356750c48cdc19f5e2cfcce 402 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 1 395 1.7E-154 T 12-10-2018 IPR014194 Sporulation stage III, protein AE BAMF_2343 44cadb143356750c48cdc19f5e2cfcce 402 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 81 395 2.6E-106 T 12-10-2018 IPR014194 Sporulation stage III, protein AE BAMF_3885 89c4ac79191ab3526deb1c5ca5930e1e 122 Pfam PF06993 Protein of unknown function (DUF1304) 11 120 1.3E-40 T 12-10-2018 IPR009732 Protein of unknown function DUF1304 BAMF_0845 e4503e3693165a6d17cd3dccf07a12d6 161 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 54 158 1.5E-22 T 12-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family BAMF_0845 e4503e3693165a6d17cd3dccf07a12d6 161 Pfam PF05119 Phage terminase, small subunit 62 150 5.8E-22 T 12-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family BAMF_2891 9e3e7ad5333cea9355f0d13eb99453c3 57 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 5 43 1.8E-16 T 12-10-2018 IPR010022 Protein of unknown function XkdX BAMF_3353 b45441ee60d59848fe1fff8e11f86b4c 116 ProDom PD070949 MEMBRANE PROTEIN YVLA SPANNING SIMILAR SE2241 LMO0604 LMO2177 LIN2280 INTEGRAL 15 114 3.0E-30 T 12-10-2018 BAMF_3588 22f05ede3051cb5a0145fc7732d67aa0 184 Pfam PF08006 Protein of unknown function (DUF1700) 1 174 1.0E-37 T 12-10-2018 IPR012963 Protein of unknown function DUF1700 BAMF_0557 d036e552083dcf03f043770bcc3b78e8 152 Pfam PF06356 Protein of unknown function (DUF1064) 4 104 5.2E-41 T 12-10-2018 IPR009414 Protein of unknown function DUF1064 BAMF_0944 f274d69c0e937f9872ee17d29ab94655 84 Gene3D G3DSA:1.20.5.320 35 79 3.1E-7 T 12-10-2018 BAMF_3351 679b2962fd47b9cbaf9ea9f293b6aed4 64 Pfam PF04024 PspC domain 2 59 3.0E-19 T 12-10-2018 IPR007168 Phage shock protein, PspC, N-terminal BAMF_0404 014e7b534395b226e9c559a5bbccb9f9 298 SUPERFAMILY SSF50974 74 280 2.88E-5 T 12-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 BAMF_0808 3cc155d2ed5d0c7b056943e19edf522d 36 Pfam PF14152 YfhE-like protein 3 35 7.1E-9 T 12-10-2018 IPR025437 YfhE-like protein BAMF_3094 55cebb8e7d6dfe7bc3358ca049382ff3 804 Pfam PF05272 Virulence-associated protein E 473 669 9.7E-74 T 12-10-2018 IPR007936 Virulence-associated E BAMF_0430 49539303a97e88ead2b0cb4f3ed70991 61 Pfam PF13076 Fur-regulated basic protein A 14 48 1.8E-15 T 12-10-2018 IPR025072 Fur-regulated basic protein A BAMF_0221 40ca3a1abec3570d3e09a0de3fae2194 478 PRINTS PR00175 Sodium/alanine symporter signature 210 229 2.0E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_0221 40ca3a1abec3570d3e09a0de3fae2194 478 PRINTS PR00175 Sodium/alanine symporter signature 182 200 2.0E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_0221 40ca3a1abec3570d3e09a0de3fae2194 478 PRINTS PR00175 Sodium/alanine symporter signature 346 368 2.0E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_0221 40ca3a1abec3570d3e09a0de3fae2194 478 PRINTS PR00175 Sodium/alanine symporter signature 92 114 2.0E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_0221 40ca3a1abec3570d3e09a0de3fae2194 478 PRINTS PR00175 Sodium/alanine symporter signature 301 319 2.0E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_0221 40ca3a1abec3570d3e09a0de3fae2194 478 PRINTS PR00175 Sodium/alanine symporter signature 406 426 2.0E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_0221 40ca3a1abec3570d3e09a0de3fae2194 478 Pfam PF01235 Sodium:alanine symporter family 57 449 1.8E-156 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_0221 40ca3a1abec3570d3e09a0de3fae2194 478 TIGRFAM TIGR00835 agcS: amino acid carrier protein 17 437 2.1E-152 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BAMF_2247 b9961701a92f3e99953a0dac16e33a84 75 Pfam PF14004 Protein of unknown function (DUF4227) 6 75 2.1E-32 T 12-10-2018 IPR025321 Protein of unknown function DUF4227 BAMF_2961 6072222f9a8a7baf6e0e5ee4e285d091 113 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 107 5.3E-31 T 12-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BAMF_0250 d1bd86afd906028a985a5a836807b4d1 463 Pfam PF16244 Domain of unknown function (DUF4901) 13 206 6.5E-15 T 12-10-2018 IPR032599 Protein of unknown function DUF4901 BAMF_0577 35405b78a88dd8067a6afdf375aee0c7 251 Pfam PF10668 Phage terminase small subunit 4 46 2.8E-5 T 12-10-2018 IPR018925 Phage terminase small subunit BAMF_0266 67f6cbd43b8ca91aa5b9a067dd6aa956 540 Pfam PF14266 Putative component of 'biosynthetic module' 40 525 1.6E-156 T 12-10-2018 IPR025647 Putative component of 'biosynthetic module' BAMF_2924 0c8036a06f13e2fa999cd2c219640e44 245 ProDom PD119415 TRANSGLUTAMINASE TRANSFERASE ACYLTRANSFERASE GAMMA-GLUTAMYLTRANSFERASE PROTEIN-GLUTAMINE TGASE SPORULATION TGL 1 244 1.0E-107 T 12-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 BAMF_2924 0c8036a06f13e2fa999cd2c219640e44 245 Hamap MF_00727 Protein-glutamine gamma-glutamyltransferase [tgl]. 1 245 49.127 T 12-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 BAMF_0764 094a3c761950fb7c5cd7e0394551d658 263 Pfam PF14167 YfkD-like protein 32 263 4.4E-119 T 12-10-2018 IPR025548 YfkD-like protein BAMF_2413 4aef6eb91ebdb000926a4c746c0a436a 238 Pfam PF14181 YqfQ-like protein 42 238 5.1E-36 T 12-10-2018 IPR025571 YqfQ-like protein BAMF_1347 0f70bfcf45918428b311649d65d54db4 167 ProDom PD034535 XKDI PHAGE PHAGE-LIKE PBSX LIN1275 RELATED ELEMENT YQBI 1 162 5.0E-56 T 12-10-2018 BAMF_1347 0f70bfcf45918428b311649d65d54db4 167 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 14 92 5.1E-7 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component BAMF_0689 64af711ef5a475934d54d210902a5869 58 Pfam PF10055 Uncharacterized small protein (DUF2292) 11 47 2.2E-16 T 12-10-2018 IPR018743 Protein of unknown function DUF2292 BAMF_1325 a0a798c3beffd5bdec69b5ce03c2868d 254 Pfam PF01925 Sulfite exporter TauE/SafE 6 253 1.1E-44 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BAMF_1434 50a2bd0b31c060dcf3ac5ed8e5c6d451 340 Pfam PF01757 Acyltransferase family 7 306 1.1E-20 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BAMF_2868 81830809924c4d8a670fc549201bcd53 176 Gene3D G3DSA:2.40.50.140 94 176 6.2E-32 T 12-10-2018 BAMF_1086 31cfe2ab360b78b888b30fb081f9f2ee 75 Pfam PF14147 Sporulation protein YhaL 4 55 1.4E-27 T 12-10-2018 IPR025428 Sporulation protein YhaL BAMF_3002 08a6f38a49fd64b96048db7f2be9a696 158 Pfam PF02681 Divergent PAP2 family 6 148 5.8E-50 T 12-10-2018 IPR003832 Protein of unknown function DUF212 BAMF_2625 587eb5d1818e56679345ebfbb22d3319 163 ProDom PD104119 YSXD OB2071 ORFY 1 159 3.0E-52 T 12-10-2018 BAMF_3226 e4c7a4bf3d994a780285668afea5376f 244 TIGRFAM TIGR03732 lanti_perm_MutE: lantibiotic protection ABC transporter permease subunit, MutE/EpiE family 3 239 5.0E-82 T 12-10-2018 IPR021205 Lantibiotic ABC transporter permease subunit, SpaE/MutE BAMF_0699 408df72b17ab228a20c30b26bb91cec8 303 Pfam PF03407 Nucleotide-diphospho-sugar transferase 33 198 1.5E-7 T 12-10-2018 IPR005069 Nucleotide-diphospho-sugar transferase BAMF_0699 408df72b17ab228a20c30b26bb91cec8 303 SUPERFAMILY SSF53448 5 276 2.11E-24 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BAMF_3564 09588ad5377d1a4a202a310a112b71c5 189 SUPERFAMILY SSF51206 78 173 3.93E-9 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like BAMF_3564 09588ad5377d1a4a202a310a112b71c5 189 Gene3D G3DSA:2.60.120.10 39 179 1.1E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BAMF_1414 30a3595f4f1aa97c8a8f1ece66e6b841 45 Pfam PF11132 Transcriptional regulator protein (SplA) 9 39 1.9E-8 T 12-10-2018 IPR022608 Transcription regulator SplA BAMF_1303 6b238602707855bca8921b45ce343aad 133 Pfam PF10990 Protein of unknown function (DUF2809) 32 115 1.1E-28 T 12-10-2018 IPR021257 Protein of unknown function DUF2809 BAMF_2482 1655a4b05dffcddee7f6f12dc01c4c32 378 Pfam PF06224 Winged helix DNA-binding domain 52 353 5.1E-26 T 12-10-2018 IPR009351 Protein of unknown function DUF1006 BAMF_2957 e77ce22afd924f5d7bdc04f27037f03c 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 296 2.0E-38 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BAMF_2489 6a3f5598ce8580bf4f1ec63888e4212f 423 Pfam PF06666 Protein of unknown function (DUF1173) 25 153 5.6E-6 T 12-10-2018 IPR009553 Protein of unknown function DUF1173 BAMF_3152 1dabf39dc340e260f2f84cd891f3d927 289 Pfam PF13349 Putative adhesin 48 288 8.3E-44 T 12-10-2018 IPR025164 Putative adhesin BAMF_2969 c9e0cd8c14c1f756f056e9326008d5ef 58 Pfam PF05952 Bacillus competence pheromone ComX 1 40 3.7E-10 T 12-10-2018 IPR009233 Competence pheromone ComX, Bacillus BAMF_0235 f67c892f6be1057216928a5e42205ac5 127 Pfam PF10710 Protein of unknown function (DUF2512) 1 116 2.6E-37 T 12-10-2018 IPR019649 Protein of unknown function DUF2512 BAMF_0799 ca7cb3380a52f4457655ee0efc6414fc 362 Pfam PF01757 Acyltransferase family 8 327 3.9E-19 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BAMF_1905 c60a0f71858ce2c2834c46f82c74c8d0 536 Pfam PF14158 YndJ-like protein 30 276 1.8E-71 T 12-10-2018 IPR025450 YndJ-like protein BAMF_1699 660f590f4d1d0402c9746ccdc112358a 143 Pfam PF03963 Flagellar hook capping protein - N-terminal region 8 76 6.3E-24 T 12-10-2018 IPR005648 Flagellar hook capping protein BAMF_1927 3ca4deb3b67a12eb2314d0404a0da13e 196 Pfam PF09335 SNARE associated Golgi protein 29 155 1.3E-26 T 12-10-2018 IPR032816 SNARE associated Golgi protein BAMF_2449 be5895574fe438bbcd0ad606eda5e3b1 112 ProDom PD072942 YQXA ORF79 1 112 1.0E-37 T 12-10-2018 IPR020534 Uncharacterised protein family YqxA BAMF_2449 be5895574fe438bbcd0ad606eda5e3b1 112 Pfam PF12438 Protein of unknown function (DUF3679) 7 62 6.0E-26 T 12-10-2018 IPR020534 Uncharacterised protein family YqxA BAMF_3831 ec7f1f80a3c66998c685a55b6214af5f 339 Pfam PF13515 Fusaric acid resistance protein-like 28 146 2.8E-18 T 12-10-2018 BAMF_1701 7e1c10fc8941c57b2d95f8a74f4ba652 71 Pfam PF06289 Flagellar protein (FlbD) 1 58 1.0E-26 T 12-10-2018 IPR009384 Swarming motility protein SwrD-like BAMF_2378 19ea671b14c6e8dcc6bff9a130af7c20 275 Pfam PF01740 STAS domain 163 254 1.5E-12 T 12-10-2018 IPR002645 STAS domain BAMF_2378 19ea671b14c6e8dcc6bff9a130af7c20 275 Gene3D G3DSA:3.30.750.24 154 267 7.5E-34 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_2378 19ea671b14c6e8dcc6bff9a130af7c20 275 SUPERFAMILY SSF52091 160 264 1.28E-14 T 12-10-2018 IPR036513 STAS domain superfamily BAMF_1865 7fd158b667b59d91c522b43e84d4171b 61 Pfam PF13783 Domain of unknown function (DUF4177) 3 59 1.9E-17 T 12-10-2018 IPR025234 Protein of unknown function DUF4177 BAMF_0886 33f9df3c3d26aa9674206f1b89662074 107 ProDom PD029230 GPA 5'REGION GP83 ORF83 GENE GP45 BACTERIOPHAGE SIMILAR ORF4 5 93 0.001 T 12-10-2018 IPR020284 Protein of unknown function CP83 BAMF_2623 a89d3881a451b526729acfb7c1a2868f 276 Pfam PF01578 Cytochrome C assembly protein 67 271 3.4E-38 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BAMF_2369 462fc689b7b8c6dbd16f062cd63e78f4 59 Pfam PF14038 YqzE-like protein 2 54 4.8E-28 T 12-10-2018 IPR025622 YqzE-like protein BAMF_2743 ac701b963199b9ebc52993b957db9e87 229 Pfam PF11167 Protein of unknown function (DUF2953) 129 182 1.2E-16 T 12-10-2018 IPR021338 Protein of unknown function DUF2953 BAMF_2259 19a66b0299b12ff6f496d4f6aa1dc260 40 Pfam PF13072 Protein of unknown function (DUF3936) 2 37 1.2E-19 T 12-10-2018 IPR025177 Cell division inhibitor MciZ BAMF_3275 c5b9ce724a8f2bef3312746c706c720a 320 Pfam PF04230 Polysaccharide pyruvyl transferase 37 288 2.2E-23 T 12-10-2018 IPR007345 Polysaccharide pyruvyl transferase BAMF_1202 bbf8023225a2f5e2d2f826f6231785a8 188 ProDom PD032558 YJAV MED CDS GENES ARGF 1 117 9.0E-35 T 12-10-2018 BAMF_2030 47be2d8b2fae0c07bf1c874208f5c7eb 496 Gene3D G3DSA:1.20.1730.10 27 484 1.8E-36 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily BAMF_2030 47be2d8b2fae0c07bf1c874208f5c7eb 496 Pfam PF00474 Sodium:solute symporter family 40 432 1.5E-20 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BAMF_3128 20566c8d589d865a5b558c801d3345bb 110 Pfam PF07875 Coat F domain 22 83 4.0E-21 T 12-10-2018 IPR012851 Spore coat protein CotF-like BAMF_2239 d406c02b8cc6974a24db6a290a0501b2 206 Gene3D G3DSA:2.60.480.10 1 96 4.9E-13 T 12-10-2018 IPR038548 Stage V sporulation protein AA, N-terminal domain superfamily BAMF_2239 d406c02b8cc6974a24db6a290a0501b2 206 Pfam PF12164 Stage V sporulation protein AA 4 88 2.1E-20 T 12-10-2018 IPR021997 Stage V sporulation protein AA BAMF_3456 3378877f5e7d998f1f6c9a854523acce 196 Pfam PF02417 Chromate transporter 6 172 9.8E-35 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 BAMF_0251 88d866f74fa1e1749613d6e2c230d988 452 Pfam PF16244 Domain of unknown function (DUF4901) 8 193 3.1E-16 T 12-10-2018 IPR032599 Protein of unknown function DUF4901 BAMF_3448 f72356e6679251898928952ff9dc7e7f 224 ProDom PD210561 YWRJ 1 224 2.0E-71 T 12-10-2018 IPR020173 Uncharacterised protein family YwrJ BAMF_2337 fb0241b8587cf7e3fb39e802b00fe4ff 135 Pfam PF03780 Asp23 family, cell envelope-related function 16 121 1.1E-35 T 12-10-2018 IPR005531 Alkaline shock protein Asp23 BAMF_1354 0e6cea7fdf6bdae4b8deee7bcef8071d 306 SUPERFAMILY SSF161065 187 270 6.15E-5 T 12-10-2018 IPR036228 ATP synthase, F0 complex, subunit D superfamily, mitochondrial GO:0000276|GO:0015078|GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BAMF_1958 08295e11616ced5d4e1649a62d178692 250 ProDom PD315856 ORF119 CPE0798 YOXB 24 246 2.0E-66 T 12-10-2018 IPR020530 Uncharacterised protein family, YoxB BAMF_2124 62ac4aed1c9a7013ac7a5e7accaee663 137 Gene3D G3DSA:2.60.40.790 24 137 1.1E-11 T 12-10-2018 IPR008978 HSP20-like chaperone BAMF_2124 62ac4aed1c9a7013ac7a5e7accaee663 137 SUPERFAMILY SSF49764 46 136 5.93E-8 T 12-10-2018 IPR008978 HSP20-like chaperone BAMF_2979 3df7080b6fd532c2328b4098d65cad1a 449 Pfam PF01594 AI-2E family transporter 99 429 5.4E-86 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like BAMF_0885 82578f47ca1f83e2dbb493376dd876d1 149 Gene3D G3DSA:3.40.1350.10 4 132 1.8E-12 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 BAMF_0478 24c074099bafac977862d1b1ea06c750 320 Pfam PF01758 Sodium Bile acid symporter family 43 216 2.5E-18 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 BAMF_0478 24c074099bafac977862d1b1ea06c750 320 Gene3D G3DSA:1.20.1530.20 4 312 1.1E-30 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily BAMF_1130 7f7aab2816d4cab425da211aee6a806e 192 PIRSF PIRSF011560 4 191 2.1E-74 T 12-10-2018 IPR010461 Competence protein ComK GO:0030420 BAMF_1130 7f7aab2816d4cab425da211aee6a806e 192 Pfam PF06338 ComK protein 10 158 9.2E-59 T 12-10-2018 IPR010461 Competence protein ComK GO:0030420 BAMF_3597 6d034f4b4c413cbeaecd5d53b19eaf9e 325 Pfam PF03601 Conserved hypothetical protein 698 6 305 3.9E-78 T 12-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 BAMF_0224 04fd24e349b264dbedd00da3ffd65ca9 84 Gene3D G3DSA:3.40.710.10 33 84 1.7E-6 T 12-10-2018 BAMF_2901 e3be4ae6e5e8ec3328297d8496b2c575 127 Pfam PF11367 Protein of unknown function (DUF3168) 10 114 5.3E-5 T 12-10-2018 IPR021508 Tail completion protein BAMF_2896 1cc52e1749b8c837910cdfcb4c99ee2f 277 Pfam PF05709 Phage tail protein 27 277 1.1E-27 T 12-10-2018 IPR008841 Siphovirus-type tail component BAMF_2912 455499358bd5d647396a1970ec4ef1cd 249 SMART SM01040 14 102 1.4E-32 T 12-10-2018 IPR003497 BRO N-terminal domain BAMF_2912 455499358bd5d647396a1970ec4ef1cd 249 Pfam PF02498 BRO family, N-terminal domain 14 102 1.0E-23 T 12-10-2018 IPR003497 BRO N-terminal domain BAMF_3803 fa47c09d0ceaf7e616e2da05169299a0 151 Pfam PF06271 RDD family 4 144 8.5E-25 T 12-10-2018 IPR010432 RDD BAMF_0870 2f90fe4de2b1dca742f05f86ce069e41 98 Gene3D G3DSA:1.25.40.10 2 98 2.5E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BAMF_3578 30217bb57a7227319926a74ae6141a76 173 Pfam PF08741 YwhD family 7 167 3.6E-86 T 12-10-2018 IPR014852 Uncharacterised protein YwhD BAMF_1153 85ed45832446f89899b1e72ea9480a3d 72 Pfam PF10676 Spore germination protein gerPA/gerPF 1 71 5.7E-27 T 12-10-2018 IPR019618 Spore germination protein GerPA/GerPF BAMF_2130 639aa3882ad46ca95d9d3d214c85bbe9 320 Pfam PF10720 Protein of unknown function (DUF2515) 14 313 8.0E-124 T 12-10-2018 IPR019658 Protein of unknown function DUF2515 BAMF_2700 d4778270cff1bc0bad1072c41122e73c 213 Pfam PF09335 SNARE associated Golgi protein 61 174 1.2E-20 T 12-10-2018 IPR032816 SNARE associated Golgi protein BAMF_0023 c634fdc667fe1fbbd7d8b8e23a1dc471 74 Pfam PF10704 Protein of unknown function (DUF2508) 4 70 1.9E-22 T 12-10-2018 IPR019644 Protein of unknown function DUF2508 BAMF_3125 fc112493228499b6361a0d5617414998 46 Pfam PF14115 YuzL-like protein 5 42 3.9E-14 T 12-10-2018 IPR025625 YuzL-like protein BAMF_0308 11d277fa55fa1163537b6e5ac67a9db8 145 Pfam PF14040 Deoxyribonuclease NucA/NucB 49 131 5.3E-11 T 12-10-2018 IPR029476 Deoxyribonuclease NucA/NucB BAMF_0408 da877f3f5bf6a0a690ed23a94a6f46fe 70 Pfam PF10676 Spore germination protein gerPA/gerPF 5 67 5.1E-18 T 12-10-2018 IPR019618 Spore germination protein GerPA/GerPF BAMF_2367 47c6ce0e55e9512dde1a301fdb115946 223 TIGRFAM TIGR04087 YqxM_for_SipW: YqxM protein 3 192 1.3E-78 T 12-10-2018 IPR023848 TasA anchoring/assembly protein GO:0062039