locus-tag class description JS608_00002 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JS608_00002 PF02874 ATP synthase alpha/beta family, beta-barrel domain JS608_00003 PF00231 ATP synthase JS608_00004 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JS608_00004 PF00306 ATP synthase alpha/beta chain, C terminal domain JS608_00004 PF02874 ATP synthase alpha/beta family, beta-barrel domain JS608_00006 PF00430 ATP synthase B/B' CF(0) JS608_00007 PF00430 ATP synthase B/B' CF(0) JS608_00008 PF00137 ATP synthase subunit C JS608_00009 PF00119 ATP synthase A chain JS608_00010 PF00119 ATP synthase A chain JS608_00011 PF03899 ATP synthase I chain JS608_00013 PF04260 Protein of unknown function (DUF436) JS608_00014 PF02502 Ribose/Galactose Isomerase JS608_00015 PF01451 Low molecular weight phosphotyrosine protein phosphatase JS608_00016 PF02659 Putative manganese efflux pump JS608_00017 PF01300 Telomere recombination JS608_00017 PF03481 Putative GTP-binding controlling metal-binding JS608_00019 PF09551 Stage II sporulation protein R (spore_II_R) JS608_00020 PF17094 Uncharacterised protein family (UPF0715) JS608_00021 PF17247 Family of unknown function (DUF5316) JS608_00022 PF17827 PrmC N-terminal domain JS608_00022 PF05175 Methyltransferase small domain JS608_00023 PF00472 RF-1 domain JS608_00023 PF03462 PCRF domain JS608_00024 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JS608_00025 PF13411 MerR HTH family regulatory protein JS608_00026 PF03547 Membrane transport protein JS608_00027 PF00390 Malic enzyme, N-terminal domain JS608_00027 PF03949 Malic enzyme, NAD binding domain JS608_00028 PF00265 Thymidine kinase JS608_00029 PF01197 Ribosomal protein L31 JS608_00030 PF07497 Rho termination factor, RNA-binding domain JS608_00030 PF07498 Rho termination factor, N-terminal domain JS608_00030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JS608_00031 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JS608_00033 PF00923 Transaldolase/Fructose-6-phosphate aldolase JS608_00034 PF01116 Fructose-bisphosphate aldolase class-II JS608_00035 PF00072 Response regulator receiver domain JS608_00036 PF10740 Domain of unknown function (DUF2529) JS608_00037 PF00117 Glutamine amidotransferase class-I JS608_00037 PF06418 CTP synthase N-terminus JS608_00038 PF05066 HB1, ASXL, restriction endonuclease HTH domain JS608_00039 PF13183 4Fe-4S dicluster domain JS608_00039 PF02754 Cysteine-rich domain JS608_00040 PF13091 PLD-like domain JS608_00041 PF03851 UV-endonuclease UvdE JS608_00043 PF00005 ABC transporter JS608_00043 PF00664 ABC transporter transmembrane region JS608_00044 PF00005 ABC transporter JS608_00044 PF00664 ABC transporter transmembrane region JS608_00045 PF13091 PLD-like domain JS608_00045 PF13396 Phospholipase_D-nuclease N-terminal JS608_00047 PF02665 Nitrate reductase gamma subunit JS608_00048 PF02613 Nitrate reductase delta subunit JS608_00049 PF14711 Respiratory nitrate reductase beta C-terminal JS608_00049 PF13247 4Fe-4S dicluster domain JS608_00050 PF00384 Molybdopterin oxidoreductase JS608_00050 PF01568 Molydopterin dinucleotide binding domain JS608_00050 PF14710 Respiratory nitrate reductase alpha N-terminal JS608_00052 PF14256 YwiC-like protein JS608_00053 PF00027 Cyclic nucleotide-binding domain JS608_00053 PF00325 Bacterial regulatory proteins, crp family JS608_00054 PF07690 Major Facilitator Superfamily JS608_00055 PF03485 Arginyl tRNA synthetase N terminal domain JS608_00055 PF05746 DALR anticodon binding domain JS608_00055 PF00750 tRNA synthetases class I (R) JS608_00056 PF09148 Domain of unknown function (DUF1934) JS608_00057 PF18801 response regulator aspartate phosphatase H, N terminal JS608_00058 PF11131 Rap-phr extracellular signalling JS608_00065 PF00491 Arginase family JS608_00066 PF17284 Spermidine synthase tetramerisation domain JS608_00067 PF00912 Transglycosylase JS608_00067 PF00905 Penicillin binding protein transpeptidase domain JS608_00069 PF08741 YwhD family JS608_00070 PF02163 Peptidase family M50 JS608_00071 PF01361 Tautomerase enzyme JS608_00072 PF01047 MarR family JS608_00073 PF13520 Amino acid permease JS608_00074 PF13520 Amino acid permease JS608_00076 PF01966 HD domain JS608_00077 PF07293 Protein of unknown function (DUF1450) JS608_00079 PF03551 Transcriptional regulator PadR-like family JS608_00081 PF00005 ABC transporter JS608_00082 PF12679 ABC-2 family transporter protein JS608_00087 PF03099 Biotin/lipoate A/B protein ligase family JS608_00088 PF03466 LysR substrate binding domain JS608_00088 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_00089 PF03601 Conserved hypothetical protein 698 JS608_00090 PF01515 Phosphate acetyl/butaryl transferase JS608_00091 PF06778 Chlorite dismutase JS608_00093 PF00155 Aminotransferase class I and II JS608_00094 PF07690 Major Facilitator Superfamily JS608_00097 PF07883 Cupin domain JS608_00099 PF07690 Major Facilitator Superfamily JS608_00100 PF07690 Major Facilitator Superfamily JS608_00101 PF00324 Amino acid permease JS608_00102 PF01546 Peptidase family M20/M25/M40 JS608_00103 PF00171 Aldehyde dehydrogenase family JS608_00104 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JS608_00104 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JS608_00105 PF17735 Biofilm surface layer A JS608_00106 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JS608_00107 PF04321 RmlD substrate binding domain JS608_00108 PF16363 GDP-mannose 4,6 dehydratase JS608_00109 PF00483 Nucleotidyl transferase JS608_00110 PF04101 Glycosyltransferase family 28 C-terminal domain JS608_00111 PF02348 Cytidylyltransferase JS608_00112 PF03102 NeuB family JS608_00112 PF08666 SAF domain JS608_00113 PF00583 Acetyltransferase (GNAT) family JS608_00114 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JS608_00115 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JS608_00116 PF00535 Glycosyl transferase family 2 JS608_00117 PF09671 Spore coat protein (Spore_GerQ) JS608_00118 PF04241 Protein of unknown function (DUF423) JS608_00119 PF00860 Permease family JS608_00120 PF17261 Family of unknown function (DUF5327) JS608_00121 PF03167 Uracil DNA glycosylase superfamily JS608_00122 PF00535 Glycosyl transferase family 2 JS608_00125 PF03551 Transcriptional regulator PadR-like family JS608_00126 PF08543 Phosphomethylpyrimidine kinase JS608_00128 PF00251 Glycosyl hydrolases family 32 N-terminal domain JS608_00128 PF08244 Glycosyl hydrolases family 32 C terminal JS608_00129 PF02378 Phosphotransferase system, EIIC JS608_00129 PF00367 phosphotransferase system, EIIB JS608_00130 PF00874 PRD domain JS608_00130 PF03123 CAT RNA binding domain JS608_00132 PF00082 Subtilase family JS608_00132 PF05922 Peptidase inhibitor I9 JS608_00132 PF13860 FlgD Ig-like domain JS608_00132 PF02225 PA domain JS608_00133 PF00296 Luciferase-like monooxygenase JS608_00134 PF00881 Nitroreductase family JS608_00135 PF01098 Cell cycle protein JS608_00136 PF00583 Acetyltransferase (GNAT) family JS608_00137 PF17368 Spore morphogenesis and germination YwcE JS608_00138 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JS608_00139 PF00510 Cytochrome c oxidase subunit III JS608_00140 PF00115 Cytochrome C and Quinol oxidase polypeptide I JS608_00141 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JS608_00141 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JS608_00142 PF04226 Transglycosylase associated protein JS608_00143 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JS608_00143 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JS608_00144 PF04138 GtrA-like protein JS608_00145 PF00440 Bacterial regulatory proteins, tetR family JS608_00146 PF08671 Anti-repressor SinI JS608_00149 PF01323 DSBA-like thioredoxin domain JS608_00150 PF04261 Dyp-type peroxidase family JS608_00150 PF10518 TAT (twin-arginine translocation) pathway signal sequence JS608_00151 PF02581 Thiamine monophosphate synthase JS608_00152 PF02110 Hydroxyethylthiazole kinase family JS608_00153 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_00153 PF03466 LysR substrate binding domain JS608_00154 PF03788 LrgA family JS608_00155 PF04172 LrgB-like family JS608_00156 PF09962 Uncharacterized conserved protein (DUF2196) JS608_00157 PF07739 TipAS antibiotic-recognition domain JS608_00157 PF13411 MerR HTH family regulatory protein JS608_00158 PF17785 PUA-like domain JS608_00158 PF10672 S-adenosylmethionine-dependent methyltransferase JS608_00159 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JS608_00160 PF02378 Phosphotransferase system, EIIC JS608_00161 PF00082 Subtilase family JS608_00162 PF01501 Glycosyl transferase family 8 JS608_00163 PF01047 MarR family JS608_00164 PF01479 S4 domain JS608_00164 PF00579 tRNA synthetases class I (W and Y) JS608_00165 PF04607 Region found in RelA / SpoT proteins JS608_00166 PF01040 UbiA prenyltransferase family JS608_00167 PF12459 D-Ala-teichoic acid biosynthesis protein JS608_00169 PF03062 MBOAT, membrane-bound O-acyltransferase family JS608_00170 PF00550 Phosphopantetheine attachment site JS608_00171 PF04914 DltD protein JS608_00172 PF01063 Amino-transferase class IV JS608_00173 PF02056 Family 4 glycosyl hydrolase JS608_00173 PF11975 Family 4 glycosyl hydrolase C-terminal domain JS608_00174 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JS608_00175 PF02378 Phosphotransferase system, EIIC JS608_00176 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JS608_00177 PF08279 HTH domain JS608_00177 PF05043 Mga helix-turn-helix domain JS608_00177 PF00874 PRD domain JS608_00177 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JS608_00178 PF02245 Methylpurine-DNA glycosylase (MPG) JS608_00179 PF01032 FecCD transport family JS608_00180 PF01032 FecCD transport family JS608_00182 PF01022 Bacterial regulatory protein, arsR family JS608_00183 PF02040 Arsenical pump membrane protein JS608_00184 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JS608_00185 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JS608_00186 PF02378 Phosphotransferase system, EIIC JS608_00187 PF00232 Glycosyl hydrolase family 1 JS608_00188 PF00480 ROK family JS608_00189 PF01238 Phosphomannose isomerase type I JS608_00190 PF02156 Glycosyl hydrolase family 26 JS608_00191 PF06628 Catalase-related immune-responsive JS608_00191 PF00199 Catalase JS608_00192 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JS608_00193 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JS608_00194 PF01256 Carbohydrate kinase JS608_00195 PF00664 ABC transporter transmembrane region JS608_00195 PF00005 ABC transporter JS608_00196 PF00005 ABC transporter JS608_00196 PF00664 ABC transporter transmembrane region JS608_00197 PF02322 Cytochrome bd terminal oxidase subunit II JS608_00198 PF01654 Cytochrome bd terminal oxidase subunit I JS608_00199 PF03390 2-hydroxycarboxylate transporter family JS608_00200 PF01522 Polysaccharide deacetylase JS608_00201 PF00005 ABC transporter JS608_00201 PF17912 MalK OB fold domain JS608_00201 PF03459 TOBE domain JS608_00202 PF13556 PucR C-terminal helix-turn-helix domain JS608_00203 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JS608_00203 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JS608_00204 PF11611 Domain of unknown function (DUF4352) JS608_00205 PF16363 GDP-mannose 4,6 dehydratase JS608_00206 PF07687 Peptidase dimerisation domain JS608_00206 PF01546 Peptidase family M20/M25/M40 JS608_00209 PF04525 LURP-one-related JS608_00210 PF01717 Cobalamin-independent synthase, Catalytic domain JS608_00211 PF08241 Methyltransferase domain JS608_00212 PF07662 Na+ dependent nucleoside transporter C-terminus JS608_00212 PF01773 Na+ dependent nucleoside transporter N-terminus JS608_00215 PF00199 Catalase JS608_00215 PF06628 Catalase-related immune-responsive JS608_00215 PF18011 C-terminal domain found in long catalases JS608_00216 PF03600 Citrate transporter JS608_00217 PF00722 Glycosyl hydrolases family 16 JS608_00219 PF03123 CAT RNA binding domain JS608_00219 PF00874 PRD domain JS608_00220 PF00874 PRD domain JS608_00220 PF03123 CAT RNA binding domain JS608_00221 PF11700 Vacuole effluxer Atg22 like JS608_00222 PF00270 DEAD/DEAH box helicase JS608_00222 PF03880 DbpA RNA binding domain JS608_00222 PF00271 Helicase conserved C-terminal domain JS608_00225 PF14176 YxiJ-like protein JS608_00231 PF00544 Pectate lyase JS608_00232 PF00892 EamA-like transporter family JS608_00233 PF00582 Universal stress protein family JS608_00235 PF00293 NUDIX domain JS608_00236 PF16369 C-terminal lipocalin-like domain JS608_00236 PF04616 Glycosyl hydrolases family 43 JS608_00237 PF09021 HutP JS608_00238 PF00221 Aromatic amino acid lyase JS608_00239 PF17392 Urocanase C-terminal domain JS608_00239 PF17391 Urocanase N-terminal domain JS608_00239 PF01175 Urocanase Rossmann-like domain JS608_00240 PF01979 Amidohydrolase family JS608_00241 PF00491 Arginase family JS608_00242 PF00324 Amino acid permease JS608_00243 PF02885 Glycosyl transferase family, helical bundle domain JS608_00243 PF00591 Glycosyl transferase family, a/b domain JS608_00243 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JS608_00244 PF02885 Glycosyl transferase family, helical bundle domain JS608_00244 PF00591 Glycosyl transferase family, a/b domain JS608_00244 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JS608_00245 PF01773 Na+ dependent nucleoside transporter N-terminus JS608_00245 PF07662 Na+ dependent nucleoside transporter C-terminus JS608_00246 PF01791 DeoC/LacD family aldolase JS608_00247 PF04198 Putative sugar-binding domain JS608_00250 PF11631 Protein of unknown function (DUF3255) JS608_00254 PF01497 Periplasmic binding protein JS608_00255 PF06486 Protein of unknown function (DUF1093) JS608_00256 PF02687 FtsX-like permease family JS608_00257 PF00005 ABC transporter JS608_00258 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_00259 PF00072 Response regulator receiver domain JS608_00259 PF00486 Transcriptional regulatory protein, C terminal JS608_00260 PF01116 Fructose-bisphosphate aldolase class-II JS608_00261 PF01261 Xylose isomerase-like TIM barrel JS608_00262 PF01261 Xylose isomerase-like TIM barrel JS608_00263 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JS608_00263 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JS608_00264 PF07690 Major Facilitator Superfamily JS608_00265 PF01261 Xylose isomerase-like TIM barrel JS608_00266 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JS608_00266 PF00205 Thiamine pyrophosphate enzyme, central domain JS608_00266 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JS608_00267 PF00294 pfkB family carbohydrate kinase JS608_00268 PF04962 KduI/IolB family JS608_00269 PF00171 Aldehyde dehydrogenase family JS608_00270 PF00455 DeoR C terminal sensor domain JS608_00270 PF08220 DeoR-like helix-turn-helix domain JS608_00271 PF00248 Aldo/keto reductase family JS608_00272 PF00083 Sugar (and other) transporter JS608_00273 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_00273 PF00183 Hsp90 protein JS608_00276 PF00196 Bacterial regulatory proteins, luxR family JS608_00276 PF00072 Response regulator receiver domain JS608_00277 PF07730 Histidine kinase JS608_00278 PF00487 Fatty acid desaturase JS608_00279 PF00440 Bacterial regulatory proteins, tetR family JS608_00280 PF00171 Aldehyde dehydrogenase family JS608_00281 PF13360 PQQ-like domain JS608_00281 PF13570 PQQ-like domain JS608_00281 PF01011 PQQ enzyme repeat JS608_00282 PF17369 Family of unknown function (DUF5391) JS608_00284 PF07690 Major Facilitator Superfamily JS608_00285 PF06271 RDD family JS608_00287 PF00578 AhpC/TSA family JS608_00288 PF07992 Pyridine nucleotide-disulphide oxidoreductase JS608_00288 PF13192 Thioredoxin domain JS608_00289 PF00324 Amino acid permease JS608_00290 PF06874 Firmicute fructose-1,6-bisphosphatase JS608_00291 PF00111 2Fe-2S iron-sulfur cluster binding domain JS608_00291 PF01799 [2Fe-2S] binding domain JS608_00294 PF12804 MobA-like NTP transferase domain JS608_00295 PF13478 XdhC Rossmann domain JS608_00295 PF02625 XdhC and CoxI family JS608_00301 PF02590 Predicted SPOUT methyltransferase JS608_00302 PF14116 YyzF-like protein JS608_00306 PF00248 Aldo/keto reductase family JS608_00307 PF00583 Acetyltransferase (GNAT) family JS608_00309 PF18801 response regulator aspartate phosphatase H, N terminal JS608_00310 PF00491 Arginase family JS608_00311 PF00324 Amino acid permease JS608_00312 PF00202 Aminotransferase class-III JS608_00313 PF00158 Sigma-54 interaction domain JS608_00313 PF02954 Bacterial regulatory protein, Fis family JS608_00313 PF13426 PAS domain JS608_00315 PF00005 ABC transporter JS608_00315 PF16326 ABC transporter C-terminal domain JS608_00315 PF12848 ABC transporter JS608_00318 PF00899 ThiF family JS608_00319 PF16736 Single Cache-like JS608_00319 PF00989 PAS fold JS608_00319 PF00512 His Kinase A (phospho-acceptor) domain JS608_00319 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_00320 PF00486 Transcriptional regulatory protein, C terminal JS608_00320 PF00072 Response regulator receiver domain JS608_00321 PF13180 PDZ domain JS608_00322 PF00753 Metallo-beta-lactamase superfamily JS608_00323 PF09648 YycH protein JS608_00324 PF07435 YycH protein JS608_00325 PF00672 HAMP domain JS608_00325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_00325 PF00512 His Kinase A (phospho-acceptor) domain JS608_00325 PF13426 PAS domain JS608_00326 PF00072 Response regulator receiver domain JS608_00326 PF00486 Transcriptional regulatory protein, C terminal JS608_00331 PF00709 Adenylosuccinate synthetase JS608_00332 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JS608_00333 PF00772 DnaB-like helicase N terminal domain JS608_00333 PF03796 DnaB-like helicase C terminal domain JS608_00334 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) JS608_00336 PF14174 YycC-like protein JS608_00337 PF13439 Glycosyltransferase Family 4 JS608_00337 PF00534 Glycosyl transferases group 1 JS608_00340 PF13439 Glycosyltransferase Family 4 JS608_00340 PF00534 Glycosyl transferases group 1 JS608_00342 PF03793 PASTA domain JS608_00342 PF00069 Protein kinase domain JS608_00343 PF03948 Ribosomal protein L9, C-terminal domain JS608_00343 PF01281 Ribosomal protein L9, N-terminal domain JS608_00344 PF01368 DHH family JS608_00344 PF02272 DHHA1 domain JS608_00345 PF09991 Predicted membrane protein (DUF2232) JS608_00347 PF07875 Coat F domain JS608_00348 PF01638 HxlR-like helix-turn-helix JS608_00349 PF01368 DHH family JS608_00349 PF02833 DHHA2 domain JS608_00350 PF00892 EamA-like transporter family JS608_00351 PF02435 Levansucrase/Invertase JS608_00352 PF08244 Glycosyl hydrolases family 32 C terminal JS608_00352 PF00251 Glycosyl hydrolases family 32 N-terminal domain JS608_00353 PF00392 Bacterial regulatory proteins, gntR family JS608_00353 PF07729 FCD domain JS608_00354 PF05163 DinB family JS608_00355 PF07690 Major Facilitator Superfamily JS608_00357 PF00881 Nitroreductase family JS608_00358 PF01047 MarR family JS608_00359 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JS608_00359 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JS608_00360 PF01047 MarR family JS608_00363 PF02627 Carboxymuconolactone decarboxylase family JS608_00364 PF03466 LysR substrate binding domain JS608_00364 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_00369 PF05922 Peptidase inhibitor I9 JS608_00369 PF00082 Subtilase family JS608_00371 PF00892 EamA-like transporter family JS608_00372 PF02525 Flavodoxin-like fold JS608_00373 PF02082 Transcriptional regulator JS608_00374 PF01381 Helix-turn-helix JS608_00375 PF00893 Small Multidrug Resistance protein JS608_00376 PF03190 Protein of unknown function, DUF255 JS608_00377 PF02517 CPBP intramembrane metalloprotease JS608_00378 PF00083 Sugar (and other) transporter JS608_00379 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JS608_00380 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JS608_00380 PF00356 Bacterial regulatory proteins, lacI family JS608_00381 PF03372 Endonuclease/Exonuclease/phosphatase family JS608_00382 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JS608_00382 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JS608_00383 PF12833 Helix-turn-helix domain JS608_00383 PF02805 Metal binding domain of Ada JS608_00384 PF01084 Ribosomal protein S18 JS608_00385 PF00436 Single-strand binding protein family JS608_00386 PF01250 Ribosomal protein S6 JS608_00387 PF01926 50S ribosome-binding GTPase JS608_00387 PF06071 Protein of unknown function (DUF933) JS608_00388 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JS608_00388 PF00384 Molybdopterin oxidoreductase JS608_00388 PF01568 Molydopterin dinucleotide binding domain JS608_00389 PF06107 Bacterial protein of unknown function (DUF951) JS608_00392 PF06866 Protein of unknown function (DUF1256) JS608_00393 PF02195 ParB-like nuclease domain JS608_00393 PF17762 HTH domain found in ParB protein JS608_00394 PF13614 AAA domain JS608_00395 PF02195 ParB-like nuclease domain JS608_00395 PF17762 HTH domain found in ParB protein JS608_00396 PF02527 rRNA small subunit methyltransferase G JS608_00397 PF01134 Glucose inhibited division protein A JS608_00397 PF13932 GidA associated domain JS608_00398 PF01926 50S ribosome-binding GTPase JS608_00398 PF12631 MnmE helical domain JS608_00398 PF10396 GTP-binding protein TrmE N-terminus JS608_00399 PF14804 Jag N-terminus JS608_00399 PF01424 R3H domain JS608_00400 PF02096 60Kd inner membrane protein JS608_00401 PF00825 Ribonuclease P JS608_00402 PF00308 Bacterial dnaA protein JS608_00402 PF08299 Bacterial dnaA protein helix-turn-helix JS608_00402 PF11638 DnaA N-terminal domain JS608_00403 PF00712 DNA polymerase III beta subunit, N-terminal domain JS608_00403 PF02767 DNA polymerase III beta subunit, central domain JS608_00403 PF02768 DNA polymerase III beta subunit, C-terminal domain JS608_00405 PF02463 RecF/RecN/SMC N terminal domain JS608_00406 PF04025 Domain of unknown function (DUF370) JS608_00407 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_00407 PF00204 DNA gyrase B JS608_00407 PF00986 DNA gyrase B subunit, carboxyl terminus JS608_00407 PF01751 Toprim domain JS608_00408 PF03989 DNA gyrase C-terminal domain, beta-propeller JS608_00408 PF00521 DNA gyrase/topoisomerase IV, subunit A JS608_00414 PF14175 YaaC-like Protein JS608_00415 PF00478 IMP dehydrogenase / GMP reductase domain JS608_00415 PF00571 CBS domain JS608_00416 PF00768 D-alanyl-D-alanine carboxypeptidase JS608_00416 PF07943 Penicillin-binding protein 5, C-terminal domain JS608_00417 PF01680 SOR/SNZ family JS608_00418 PF01174 SNO glutamine amidotransferase family JS608_00419 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JS608_00419 PF02403 Seryl-tRNA synthetase N-terminal domain JS608_00420 PF02595 Glycerate kinase family JS608_00422 PF01712 Deoxynucleoside kinase JS608_00423 PF01712 Deoxynucleoside kinase JS608_00424 PF00704 Glycosyl hydrolases family 18 JS608_00424 PF01476 LysM domain JS608_00425 PF00857 Isochorismatase family JS608_00429 PF12169 DNA polymerase III subunits gamma and tau domain III JS608_00430 PF02575 YbaB/EbfC DNA-binding family JS608_00431 PF02132 RecR protein JS608_00431 PF13662 Toprim domain JS608_00432 PF10704 Protein of unknown function (DUF2508) JS608_00433 PF07441 SigmaK-factor processing regulatory protein BofA JS608_00439 PF10764 Inhibitor of sigma-G Gin JS608_00440 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein JS608_00441 PF05816 Toxic anion resistance protein (TelA) JS608_00442 PF01276 Orn/Lys/Arg decarboxylase, major domain JS608_00442 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JS608_00443 PF02223 Thymidylate kinase JS608_00444 PF06153 Cyclic-di-AMP receptor JS608_00445 PF03885 Protein of unknown function (DUF327) JS608_00446 PF09115 DNA polymerase III, delta subunit, C terminal JS608_00447 PF04468 PSP1 C-terminal conserved region JS608_00448 PF06156 Initiation control protein YabA JS608_00449 PF05175 Methyltransferase small domain JS608_00450 PF01541 GIY-YIG catalytic domain JS608_00451 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JS608_00452 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JS608_00452 PF18277 AbrB C-terminal domain JS608_00453 PF08264 Anticodon-binding domain of tRNA JS608_00453 PF09334 tRNA synthetases class I (M) JS608_00453 PF01588 Putative tRNA binding domain JS608_00454 PF01026 TatD related DNase JS608_00455 PF06725 3D domain JS608_00455 PF03990 G5-linked-Ubiquitin-like domain JS608_00455 PF07501 G5 domain JS608_00456 PF13331 Domain of unknown function (DUF4093) JS608_00456 PF13662 Toprim domain JS608_00457 PF00398 Ribosomal RNA adenine dimethylase JS608_00458 PF05582 YabG peptidase U57 JS608_00459 PF06257 Biofilm formation stimulator VEG JS608_00460 PF00269 Small, acid-soluble spore proteins, alpha/beta type JS608_00461 PF00288 GHMP kinases N terminal domain JS608_00461 PF08544 GHMP kinases C terminal JS608_00462 PF00156 Phosphoribosyl transferase domain JS608_00462 PF09182 Bacterial purine repressor, N-terminal JS608_00463 PF01042 Endoribonuclease L-PSP JS608_00464 PF04026 SpoVG JS608_00465 PF00132 Bacterial transferase hexapeptide (six repeats) JS608_00465 PF00483 Nucleotidyl transferase JS608_00466 PF14572 Phosphoribosyl synthetase-associated domain JS608_00466 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JS608_00467 PF14693 Ribosomal protein TL5, C-terminal domain JS608_00467 PF01386 Ribosomal L25p family JS608_00468 PF01195 Peptidyl-tRNA hydrolase JS608_00469 PF10955 Protein of unknown function (DUF2757) JS608_00470 PF17757 UvrB interaction domain JS608_00470 PF02559 CarD-like/TRCF domain JS608_00470 PF00270 DEAD/DEAH box helicase JS608_00470 PF00271 Helicase conserved C-terminal domain JS608_00470 PF03461 TRCF domain JS608_00471 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JS608_00471 PF15714 Stage V sporulation protein T C-terminal, transcription factor JS608_00472 PF14667 Polysaccharide biosynthesis C-terminal domain JS608_00472 PF01943 Polysaccharide biosynthesis protein JS608_00473 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JS608_00473 PF03819 MazG nucleotide pyrophosphohydrolase domain JS608_00474 PF01479 S4 domain JS608_00475 PF07873 YabP family JS608_00476 PF09578 Spore cortex protein YabQ (Spore_YabQ) JS608_00477 PF04977 Septum formation initiator JS608_00478 PF00575 S1 RNA binding domain JS608_00481 PF07228 Stage II sporulation protein E (SpoIIE) JS608_00482 PF00092 von Willebrand factor type A domain JS608_00483 PF00069 Protein kinase domain JS608_00484 PF11734 TilS substrate C-terminal domain JS608_00484 PF09179 TilS substrate binding domain JS608_00484 PF01171 PP-loop family JS608_00485 PF00156 Phosphoribosyl transferase domain JS608_00486 PF17862 AAA+ lid domain JS608_00486 PF06480 FtsH Extracellular JS608_00486 PF01434 Peptidase family M41 JS608_00486 PF00004 ATPase family associated with various cellular activities (AAA) JS608_00487 PF00004 ATPase family associated with various cellular activities (AAA) JS608_00487 PF17862 AAA+ lid domain JS608_00487 PF06480 FtsH Extracellular JS608_00487 PF01434 Peptidase family M41 JS608_00488 PF03309 Type III pantothenate kinase JS608_00489 PF01430 Hsp33 protein JS608_00490 PF13145 PPIC-type PPIASE domain JS608_00491 PF00291 Pyridoxal-phosphate dependent enzyme JS608_00493 PF00117 Glutamine amidotransferase class-I JS608_00494 PF01063 Amino-transferase class IV JS608_00495 PF00809 Pterin binding enzyme JS608_00496 PF02152 Dihydroneopterin aldolase JS608_00497 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JS608_00498 PF01381 Helix-turn-helix JS608_00499 PF01207 Dihydrouridine synthase (Dus) JS608_00500 PF00152 tRNA synthetases class II (D, K and N) JS608_00500 PF01336 OB-fold nucleic acid binding domain JS608_00516 PF05848 CtsR N-terminal HTH domain JS608_00516 PF17727 CtsR C-terminal dimerization domain JS608_00517 PF02151 UvrB/uvrC motif JS608_00518 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JS608_00519 PF10431 C-terminal, D2-small domain, of ClpB protein JS608_00519 PF00004 ATPase family associated with various cellular activities (AAA) JS608_00519 PF07724 AAA domain (Cdc48 subfamily) JS608_00519 PF17871 AAA lid domain JS608_00519 PF02861 Clp amino terminal domain, pathogenicity island component JS608_00520 PF18073 Rubredoxin metal binding domain JS608_00521 PF10635 DisA bacterial checkpoint controller linker region JS608_00521 PF02457 DisA bacterial checkpoint controller nucleotide-binding JS608_00523 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JS608_00524 PF02542 YgbB family JS608_00525 PF00749 tRNA synthetases class I (E and Q), catalytic domain JS608_00526 PF06426 Serine acetyltransferase, N-terminal JS608_00526 PF00132 Bacterial transferase hexapeptide (six repeats) JS608_00527 PF01406 tRNA synthetases class I (C) catalytic domain JS608_00527 PF09190 DALR domain JS608_00528 PF00636 Ribonuclease III domain JS608_00529 PF08032 RNA 2'-O ribose methyltransferase substrate binding JS608_00529 PF00588 SpoU rRNA Methylase family JS608_00530 PF05991 YacP-like NYN domain JS608_00531 PF04542 Sigma-70 region 2 JS608_00531 PF08281 Sigma-70, region 4 JS608_00532 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JS608_00533 PF02357 Transcription termination factor nusG JS608_00533 PF00467 KOW motif JS608_00534 PF03946 Ribosomal protein L11, N-terminal domain JS608_00534 PF00298 Ribosomal protein L11, RNA binding domain JS608_00535 PF00687 Ribosomal protein L1p/L10e family JS608_00536 PF00466 Ribosomal protein L10 JS608_00537 PF16320 Ribosomal protein L7/L12 dimerisation domain JS608_00537 PF00542 Ribosomal protein L7/L12 C-terminal domain JS608_00538 PF05175 Methyltransferase small domain JS608_00539 PF04563 RNA polymerase beta subunit JS608_00539 PF04561 RNA polymerase Rpb2, domain 2 JS608_00539 PF04565 RNA polymerase Rpb2, domain 3 JS608_00539 PF10385 RNA polymerase beta subunit external 1 domain JS608_00539 PF00562 RNA polymerase Rpb2, domain 6 JS608_00539 PF04560 RNA polymerase Rpb2, domain 7 JS608_00540 PF04983 RNA polymerase Rpb1, domain 3 JS608_00540 PF05000 RNA polymerase Rpb1, domain 4 JS608_00540 PF04998 RNA polymerase Rpb1, domain 5 JS608_00540 PF04997 RNA polymerase Rpb1, domain 1 JS608_00540 PF00623 RNA polymerase Rpb1, domain 2 JS608_00541 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JS608_00542 PF00164 Ribosomal protein S12/S23 JS608_00543 PF00177 Ribosomal protein S7p/S5e JS608_00544 PF03764 Elongation factor G, domain IV JS608_00544 PF14492 Elongation Factor G, domain II JS608_00544 PF00679 Elongation factor G C-terminus JS608_00544 PF03144 Elongation factor Tu domain 2 JS608_00544 PF00009 Elongation factor Tu GTP binding domain JS608_00545 PF03144 Elongation factor Tu domain 2 JS608_00545 PF00009 Elongation factor Tu GTP binding domain JS608_00545 PF03143 Elongation factor Tu C-terminal domain JS608_00547 PF00338 Ribosomal protein S10p/S20e JS608_00548 PF00297 Ribosomal protein L3 JS608_00549 PF00573 Ribosomal protein L4/L1 family JS608_00550 PF00276 Ribosomal protein L23 JS608_00551 PF00181 Ribosomal Proteins L2, RNA binding domain JS608_00551 PF03947 Ribosomal Proteins L2, C-terminal domain JS608_00552 PF00203 Ribosomal protein S19 JS608_00553 PF00237 Ribosomal protein L22p/L17e JS608_00554 PF00189 Ribosomal protein S3, C-terminal domain JS608_00554 PF07650 KH domain JS608_00555 PF00252 Ribosomal protein L16p/L10e JS608_00556 PF00831 Ribosomal L29 protein JS608_00557 PF00366 Ribosomal protein S17 JS608_00558 PF00238 Ribosomal protein L14p/L23e JS608_00559 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JS608_00559 PF00467 KOW motif JS608_00560 PF00281 Ribosomal protein L5 JS608_00560 PF00673 ribosomal L5P family C-terminus JS608_00561 PF00253 Ribosomal protein S14p/S29e JS608_00562 PF00410 Ribosomal protein S8 JS608_00563 PF00347 Ribosomal protein L6 JS608_00564 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JS608_00565 PF00333 Ribosomal protein S5, N-terminal domain JS608_00565 PF03719 Ribosomal protein S5, C-terminal domain JS608_00566 PF00327 Ribosomal protein L30p/L7e JS608_00567 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JS608_00568 PF00344 SecY translocase JS608_00569 PF05191 Adenylate kinase, active site lid JS608_00570 PF00557 Metallopeptidase family M24 JS608_00571 PF01176 Translation initiation factor 1A / IF-1 JS608_00572 PF00444 Ribosomal protein L36 JS608_00573 PF00416 Ribosomal protein S13/S18 JS608_00574 PF00411 Ribosomal protein S11 JS608_00575 PF01000 RNA polymerase Rpb3/RpoA insert domain JS608_00575 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JS608_00575 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JS608_00576 PF01196 Ribosomal protein L17 JS608_00577 PF00005 ABC transporter JS608_00578 PF00005 ABC transporter JS608_00579 PF02361 Cobalt transport protein JS608_00580 PF01416 tRNA pseudouridine synthase JS608_00581 PF00572 Ribosomal protein L13 JS608_00582 PF00380 Ribosomal protein S9/S16 JS608_00583 PF08241 Methyltransferase domain JS608_00584 PF05163 DinB family JS608_00585 PF10730 Protein of unknown function (DUF2521) JS608_00586 PF01520 N-acetylmuramoyl-L-alanine amidase JS608_00587 PF10609 NUBPL iron-transfer P-loop NTPase JS608_00588 PF17898 Spore germination GerD central core domain JS608_00589 PF14089 KinB-signalling pathway activation in sporulation JS608_00590 PF01522 Polysaccharide deacetylase JS608_00602 PF07690 Major Facilitator Superfamily JS608_00603 PF00202 Aminotransferase class-III JS608_00605 PF08240 Alcohol dehydrogenase GroES-like domain JS608_00605 PF00107 Zinc-binding dehydrogenase JS608_00606 PF01740 STAS domain JS608_00606 PF00916 Sulfate permease family JS608_00607 PF01758 Sodium Bile acid symporter family JS608_00608 PF00756 Putative esterase JS608_00609 PF01032 FecCD transport family JS608_00610 PF01032 FecCD transport family JS608_00611 PF01497 Periplasmic binding protein JS608_00612 PF12833 Helix-turn-helix domain JS608_00612 PF01497 Periplasmic binding protein JS608_00613 PF07075 Protein of unknown function (DUF1343) JS608_00614 PF01915 Glycosyl hydrolase family 3 C-terminal domain JS608_00614 PF00933 Glycosyl hydrolase family 3 N terminal domain JS608_00615 PF00144 Beta-lactamase JS608_00616 PF02378 Phosphotransferase system, EIIC JS608_00616 PF00367 phosphotransferase system, EIIB JS608_00617 PF01380 SIS domain JS608_00619 PF04463 Protein of unknown function (DUF523) JS608_00625 PF04542 Sigma-70 region 2 JS608_00625 PF08281 Sigma-70, region 4 JS608_00626 PF13490 Putative zinc-finger JS608_00627 PF02457 DisA bacterial checkpoint controller nucleotide-binding JS608_00628 PF07949 YbbR-like protein JS608_00629 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JS608_00629 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JS608_00629 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JS608_00629 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JS608_00631 PF01380 SIS domain JS608_00632 PF00005 ABC transporter JS608_00634 PF00248 Aldo/keto reductase family JS608_00635 PF04172 LrgB-like family JS608_00636 PF03788 LrgA family JS608_00637 PF01047 MarR family JS608_00638 PF00324 Amino acid permease JS608_00639 PF13419 Haloacid dehalogenase-like hydrolase JS608_00640 PF07730 Histidine kinase JS608_00641 PF00196 Bacterial regulatory proteins, luxR family JS608_00641 PF00072 Response regulator receiver domain JS608_00642 PF00005 ABC transporter JS608_00646 PF00975 Thioesterase domain JS608_00648 PF00975 Thioesterase domain JS608_00648 PF00668 Condensation domain JS608_00648 PF00550 Phosphopantetheine attachment site JS608_00648 PF13193 AMP-binding enzyme C-terminal domain JS608_00648 PF00501 AMP-binding enzyme JS608_00649 PF00501 AMP-binding enzyme JS608_00649 PF00668 Condensation domain JS608_00649 PF00975 Thioesterase domain JS608_00649 PF13193 AMP-binding enzyme C-terminal domain JS608_00649 PF00550 Phosphopantetheine attachment site JS608_00650 PF00698 Acyl transferase domain JS608_00651 PF14765 Polyketide synthase dehydratase JS608_00651 PF08659 KR domain JS608_00651 PF00550 Phosphopantetheine attachment site JS608_00651 PF16197 Ketoacyl-synthetase C-terminal extension JS608_00651 PF00668 Condensation domain JS608_00651 PF13193 AMP-binding enzyme C-terminal domain JS608_00651 PF00501 AMP-binding enzyme JS608_00651 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_00651 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_00652 PF00501 AMP-binding enzyme JS608_00652 PF13193 AMP-binding enzyme C-terminal domain JS608_00652 PF00668 Condensation domain JS608_00652 PF16197 Ketoacyl-synthetase C-terminal extension JS608_00652 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_00652 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_00652 PF08659 KR domain JS608_00652 PF14765 Polyketide synthase dehydratase JS608_00652 PF00550 Phosphopantetheine attachment site JS608_00653 PF01593 Flavin containing amine oxidoreductase JS608_00654 PF00550 Phosphopantetheine attachment site JS608_00654 PF00668 Condensation domain JS608_00654 PF13193 AMP-binding enzyme C-terminal domain JS608_00654 PF00501 AMP-binding enzyme JS608_00655 PF00891 O-methyltransferase domain JS608_00656 PF16219 Domain of unknown function (DUF4879) JS608_00657 PF17334 Minor curli fiber component A JS608_00660 PF13520 Amino acid permease JS608_00661 PF03009 Glycerophosphoryl diester phosphodiesterase family JS608_00662 PF07690 Major Facilitator Superfamily JS608_00663 PF10852 Protein of unknown function (DUF2651) JS608_00664 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JS608_00664 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JS608_00666 PF01471 Putative peptidoglycan binding domain JS608_00666 PF08924 Domain of unknown function (DUF1906) JS608_00669 PF00465 Iron-containing alcohol dehydrogenase JS608_00670 PF02222 ATP-grasp domain JS608_00671 PF01066 CDP-alcohol phosphatidyltransferase JS608_00672 PF09335 SNARE associated Golgi protein JS608_00673 PF02666 Phosphatidylserine decarboxylase JS608_00675 PF12368 Rhodanase C-terminal JS608_00675 PF17773 UPF0176 acylphosphatase like domain JS608_00675 PF00581 Rhodanese-like domain JS608_00676 PF00375 Sodium:dicarboxylate symporter family JS608_00677 PF01063 Amino-transferase class IV JS608_00678 PF00324 Amino acid permease JS608_00679 PF02574 Homocysteine S-methyltransferase JS608_00680 PF01235 Sodium:alanine symporter family JS608_00681 PF04960 Glutaminase JS608_00682 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_00684 PF01636 Phosphotransferase enzyme family JS608_00685 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein JS608_00686 PF01545 Cation efflux family JS608_00686 PF16916 Dimerisation domain of Zinc Transporter JS608_00687 PF00881 Nitroreductase family JS608_00688 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JS608_00689 PF07681 DoxX JS608_00690 PF00085 Thioredoxin JS608_00691 PF10710 Protein of unknown function (DUF2512) JS608_00692 PF07486 Cell Wall Hydrolase JS608_00693 PF09423 PhoD-like phosphatase JS608_00693 PF16655 PhoD-like phosphatase, N-terminal domain JS608_00694 PF02416 mttA/Hcf106 family JS608_00695 PF00902 Sec-independent protein translocase protein (TatC) JS608_00696 PF01470 Pyroglutamyl peptidase JS608_00697 PF00266 Aminotransferase class-V JS608_00698 PF07690 Major Facilitator Superfamily JS608_00699 PF00440 Bacterial regulatory proteins, tetR family JS608_00700 PF17763 Glutaminase/Asparaginase C-terminal domain JS608_00700 PF00710 Asparaginase, N-terminal JS608_00701 PF01674 Lipase (class 2) JS608_00702 PF02810 SEC-C motif JS608_00702 PF05225 helix-turn-helix, Psq domain JS608_00703 PF00248 Aldo/keto reductase family JS608_00704 PF11611 Domain of unknown function (DUF4352) JS608_00704 PF17118 Domain of unknown function (DUF5105) JS608_00705 PF16244 Domain of unknown function (DUF4901) JS608_00706 PF16244 Domain of unknown function (DUF4901) JS608_00707 PF13539 D-alanyl-D-alanine carboxypeptidase JS608_00708 PF18801 response regulator aspartate phosphatase H, N terminal JS608_00711 PF01297 Zinc-uptake complex component A periplasmic JS608_00712 PF00005 ABC transporter JS608_00713 PF00950 ABC 3 transport family JS608_00714 PF00296 Luciferase-like monooxygenase JS608_00715 PF02342 TerD domain JS608_00716 PF02342 TerD domain JS608_00717 PF02342 TerD domain JS608_00718 PF03741 Integral membrane protein TerC family JS608_00719 PF14266 Putative component of 'biosynthetic module' JS608_00720 PF05816 Toxic anion resistance protein (TelA) JS608_00721 PF07690 Major Facilitator Superfamily JS608_00722 PF00005 ABC transporter JS608_00722 PF00571 CBS domain JS608_00723 PF00528 Binding-protein-dependent transport system inner membrane component JS608_00724 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JS608_00725 PF07687 Peptidase dimerisation domain JS608_00725 PF01546 Peptidase family M20/M25/M40 JS608_00726 PF03606 C4-dicarboxylate anaerobic carrier JS608_00728 PF00128 Alpha amylase, catalytic domain JS608_00728 PF16738 Starch-binding module 26 JS608_00729 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JS608_00729 PF00056 lactate/malate dehydrogenase, NAD binding domain JS608_00730 PF07690 Major Facilitator Superfamily JS608_00731 PF01047 MarR family JS608_00732 PF01810 LysE type translocator JS608_00733 PF08892 YqcI/YcgG family JS608_00734 PF00324 Amino acid permease JS608_00735 PF09347 Domain of unknown function (DUF1989) JS608_00736 PF02540 NAD synthase JS608_00737 PF12197 Bacillus cereus group antimicrobial protein JS608_00740 PF07690 Major Facilitator Superfamily JS608_00741 PF01202 Shikimate kinase JS608_00742 PF05448 Acetyl xylan esterase (AXE1) JS608_00743 PF10127 RNA repair pathway DNA polymerase beta family JS608_00744 PF01619 Proline dehydrogenase JS608_00745 PF00171 Aldehyde dehydrogenase family JS608_00746 PF00474 Sodium:solute symporter family JS608_00747 PF13556 PucR C-terminal helix-turn-helix domain JS608_00747 PF17853 GGDEF-like domain JS608_00748 PF07992 Pyridine nucleotide-disulphide oxidoreductase JS608_00749 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JS608_00750 PF00355 Rieske [2Fe-2S] domain JS608_00751 PF04324 BFD-like [2Fe-2S] binding domain JS608_00751 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JS608_00751 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JS608_00751 PF07992 Pyridine nucleotide-disulphide oxidoreductase JS608_00751 PF18267 Rubredoxin NAD+ reductase C-terminal domain JS608_00752 PF02492 CobW/HypB/UreG, nucleotide-binding domain JS608_00752 PF07683 Cobalamin synthesis protein cobW C-terminal domain JS608_00753 PF08240 Alcohol dehydrogenase GroES-like domain JS608_00753 PF13823 Alcohol dehydrogenase GroES-associated JS608_00753 PF00107 Zinc-binding dehydrogenase JS608_00754 PF06271 RDD family JS608_00755 PF10925 Protein of unknown function (DUF2680) JS608_00756 PF00232 Glycosyl hydrolase family 1 JS608_00757 PF11033 Competence protein J (ComJ) JS608_00758 PF14040 Deoxyribonuclease NucA/NucB JS608_00759 PF01380 SIS domain JS608_00761 PF01638 HxlR-like helix-turn-helix JS608_00763 PF00501 AMP-binding enzyme JS608_00763 PF13193 AMP-binding enzyme C-terminal domain JS608_00763 PF00668 Condensation domain JS608_00763 PF00550 Phosphopantetheine attachment site JS608_00764 PF00975 Thioesterase domain JS608_00764 PF13193 AMP-binding enzyme C-terminal domain JS608_00764 PF00668 Condensation domain JS608_00764 PF00550 Phosphopantetheine attachment site JS608_00764 PF00501 AMP-binding enzyme JS608_00765 PF00975 Thioesterase domain JS608_00766 PF00155 Aminotransferase class I and II JS608_00766 PF07685 CobB/CobQ-like glutamine amidotransferase domain JS608_00766 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JS608_00767 PF01648 4'-phosphopantetheinyl transferase superfamily JS608_00769 PF00005 ABC transporter JS608_00770 PF00528 Binding-protein-dependent transport system inner membrane component JS608_00771 PF00497 Bacterial extracellular solute-binding proteins, family 3 JS608_00772 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_00772 PF03466 LysR substrate binding domain JS608_00773 PF02441 Flavoprotein JS608_00774 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JS608_00777 PF00854 POT family JS608_00778 PF13229 Right handed beta helix region JS608_00778 PF12708 Pectate lyase superfamily protein JS608_00780 PF03323 Bacillus/Clostridium GerA spore germination protein JS608_00781 PF05504 Spore germination B3/ GerAC like, C-terminal JS608_00782 PF03845 Spore germination protein JS608_00783 PF00296 Luciferase-like monooxygenase JS608_00784 PF00583 Acetyltransferase (GNAT) family JS608_00785 PF00497 Bacterial extracellular solute-binding proteins, family 3 JS608_00786 PF00528 Binding-protein-dependent transport system inner membrane component JS608_00787 PF00005 ABC transporter JS608_00788 PF01546 Peptidase family M20/M25/M40 JS608_00788 PF07687 Peptidase dimerisation domain JS608_00789 PF01546 Peptidase family M20/M25/M40 JS608_00789 PF07687 Peptidase dimerisation domain JS608_00790 PF03972 MmgE/PrpD family JS608_00791 PF00005 ABC transporter JS608_00792 PF02687 FtsX-like permease family JS608_00792 PF12704 MacB-like periplasmic core domain JS608_00793 PF00486 Transcriptional regulatory protein, C terminal JS608_00793 PF00072 Response regulator receiver domain JS608_00794 PF00672 HAMP domain JS608_00794 PF00512 His Kinase A (phospho-acceptor) domain JS608_00794 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_00795 PF18801 response regulator aspartate phosphatase H, N terminal JS608_00796 PF11131 Rap-phr extracellular signalling JS608_00797 PF00696 Amino acid kinase family JS608_00797 PF13840 ACT domain JS608_00798 PF01032 FecCD transport family JS608_00799 PF01032 FecCD transport family JS608_00800 PF00005 ABC transporter JS608_00801 PF01497 Periplasmic binding protein JS608_00802 PF07690 Major Facilitator Superfamily JS608_00803 PF00440 Bacterial regulatory proteins, tetR family JS608_00804 PF00881 Nitroreductase family JS608_00805 PF03992 Antibiotic biosynthesis monooxygenase JS608_00806 PF01022 Bacterial regulatory protein, arsR family JS608_00807 PF00155 Aminotransferase class I and II JS608_00807 PF00392 Bacterial regulatory proteins, gntR family JS608_00808 PF00202 Aminotransferase class-III JS608_00809 PF00171 Aldehyde dehydrogenase family JS608_00810 PF06800 Sugar transport protein JS608_00812 PF07987 Domain of unkown function (DUF1775) JS608_00813 PF04234 CopC domain JS608_00813 PF05425 Copper resistance protein D JS608_00813 PF13115 YtkA-like JS608_00814 PF05573 NosL JS608_00814 PF08220 DeoR-like helix-turn-helix domain JS608_00816 PF02378 Phosphotransferase system, EIIC JS608_00816 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JS608_00817 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JS608_00818 PF01232 Mannitol dehydrogenase Rossmann domain JS608_00818 PF08125 Mannitol dehydrogenase C-terminal domain JS608_00819 PF07977 FabA-like domain JS608_00822 PF03746 LamB/YcsF family JS608_00823 PF01566 Natural resistance-associated macrophage protein JS608_00824 PF07286 Protein of unknown function (DUF1445) JS608_00825 PF02682 Carboxyltransferase domain, subdomain C and D JS608_00826 PF02626 Carboxyltransferase domain, subdomain A and B JS608_00827 PF09339 IclR helix-turn-helix domain JS608_00827 PF01614 Bacterial transcriptional regulator JS608_00828 PF13472 GDSL-like Lipase/Acylhydrolase family JS608_00829 PF13129 Protein of unknown function (DUF3953) JS608_00830 PF03992 Antibiotic biosynthesis monooxygenase JS608_00831 PF05223 NTF2-like N-terminal transpeptidase domain JS608_00831 PF03717 Penicillin-binding Protein dimerisation domain JS608_00831 PF00905 Penicillin binding protein transpeptidase domain JS608_00832 PF00248 Aldo/keto reductase family JS608_00833 PF05043 Mga helix-turn-helix domain JS608_00833 PF08279 HTH domain JS608_00833 PF00874 PRD domain JS608_00833 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JS608_00833 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JS608_00834 PF13193 AMP-binding enzyme C-terminal domain JS608_00834 PF00501 AMP-binding enzyme JS608_00837 PF13302 Acetyltransferase (GNAT) domain JS608_00838 PF16242 Pyridoxamine 5'-phosphate oxidase like JS608_00840 PF10997 Alternate to MurJ JS608_00841 PF12823 Domain of unknown function (DUF3817) JS608_00842 PF01037 Lrp/AsnC ligand binding domain JS608_00843 PF01131 DNA topoisomerase JS608_00843 PF01751 Toprim domain JS608_00845 PF00990 Diguanylate cyclase, GGDEF domain JS608_00846 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) JS608_00848 PF03170 Bacterial cellulose synthase subunit JS608_00849 PF13520 Amino acid permease JS608_00850 PF00293 NUDIX domain JS608_00851 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JS608_00851 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JS608_00851 PF00205 Thiamine pyrophosphate enzyme, central domain JS608_00852 PF01476 LysM domain JS608_00852 PF01471 Putative peptidoglycan binding domain JS608_00852 PF01510 N-acetylmuramoyl-L-alanine amidase JS608_00855 PF18801 response regulator aspartate phosphatase H, N terminal JS608_00855 PF13176 Tetratricopeptide repeat JS608_00862 PF01566 Natural resistance-associated macrophage protein JS608_00864 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) JS608_00865 PF00893 Small Multidrug Resistance protein JS608_00866 PF12787 EcsC protein family JS608_00867 PF10685 Stress-induced bacterial acidophilic repeat motif JS608_00867 PF00477 Small hydrophilic plant seed protein JS608_00868 PF07883 Cupin domain JS608_00869 PF16291 Domain of unknown function (DUF4937 JS608_00870 PF05067 Manganese containing catalase JS608_00871 PF03480 Bacterial extracellular solute-binding protein, family 7 JS608_00872 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_00872 PF17203 Single cache domain 3 JS608_00872 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JS608_00873 PF08279 HTH domain JS608_00873 PF00072 Response regulator receiver domain JS608_00874 PF00375 Sodium:dicarboxylate symporter family JS608_00875 PF01594 AI-2E family transporter JS608_00876 PF00005 ABC transporter JS608_00879 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JS608_00879 PF02770 Acyl-CoA dehydrogenase, middle domain JS608_00879 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JS608_00880 PF13040 Fur-regulated basic protein B JS608_00882 PF01545 Cation efflux family JS608_00882 PF16916 Dimerisation domain of Zinc Transporter JS608_00883 PF00085 Thioredoxin JS608_00884 PF07478 D-ala D-ala ligase C-terminus JS608_00884 PF01820 D-ala D-ala ligase N-terminus JS608_00885 PF01225 Mur ligase family, catalytic domain JS608_00885 PF02875 Mur ligase family, glutamate ligase domain JS608_00885 PF08245 Mur ligase middle domain JS608_00886 PF00270 DEAD/DEAH box helicase JS608_00886 PF00271 Helicase conserved C-terminal domain JS608_00887 PF03703 Bacterial PH domain JS608_00888 PF03703 Bacterial PH domain JS608_00889 PF01694 Rhomboid family JS608_00890 PF01648 4'-phosphopantetheinyl transferase superfamily JS608_00892 PF01168 Alanine racemase, N-terminal domain JS608_00892 PF00842 Alanine racemase, C-terminal domain JS608_00893 PF01402 Ribbon-helix-helix protein, copG family JS608_00894 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JS608_00895 PF08678 Rsbr N terminal JS608_00895 PF01740 STAS domain JS608_00896 PF01740 STAS domain JS608_00897 PF13581 Histidine kinase-like ATPase domain JS608_00898 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain JS608_00898 PF07228 Stage II sporulation protein E (SpoIIE) JS608_00899 PF01740 STAS domain JS608_00900 PF13581 Histidine kinase-like ATPase domain JS608_00901 PF04542 Sigma-70 region 2 JS608_00901 PF04539 Sigma-70 region 3 JS608_00901 PF04545 Sigma-70, region 4 JS608_00902 PF07228 Stage II sporulation protein E (SpoIIE) JS608_00903 PF16921 Tex protein YqgF-like domain JS608_00903 PF17674 HHH domain JS608_00903 PF00575 S1 RNA binding domain JS608_00903 PF09371 Tex-like protein N-terminal domain JS608_00905 PF10263 SprT-like family JS608_00913 PF02525 Flavodoxin-like fold JS608_00914 PF00561 alpha/beta hydrolase fold JS608_00915 PF07690 Major Facilitator Superfamily JS608_00916 PF07859 alpha/beta hydrolase fold JS608_00917 PF02566 OsmC-like protein JS608_00918 PF01047 MarR family JS608_00920 PF01575 MaoC like domain JS608_00922 PF02082 Transcriptional regulator JS608_00923 PF13460 NAD(P)H-binding JS608_00924 PF00313 'Cold-shock' DNA-binding domain JS608_00926 PF02583 Metal-sensitive transcriptional repressor JS608_00927 PF13686 DsrE/DsrF/DrsH-like family JS608_00928 PF00581 Rhodanese-like domain JS608_00928 PF01206 Sulfurtransferase TusA JS608_00929 PF00753 Metallo-beta-lactamase superfamily JS608_00929 PF00581 Rhodanese-like domain JS608_00930 PF01206 Sulfurtransferase TusA JS608_00931 PF01925 Sulfite exporter TauE/SafE JS608_00932 PF01177 Asp/Glu/Hydantoin racemase JS608_00935 PF01734 Patatin-like phospholipase JS608_00937 PF07883 Cupin domain JS608_00940 PF08031 Berberine and berberine like JS608_00940 PF01565 FAD binding domain JS608_00942 PF01545 Cation efflux family JS608_00942 PF16916 Dimerisation domain of Zinc Transporter JS608_00947 PF00701 Dihydrodipicolinate synthetase family JS608_00949 PF04055 Radical SAM superfamily JS608_00952 PF08240 Alcohol dehydrogenase GroES-like domain JS608_00952 PF00107 Zinc-binding dehydrogenase JS608_00953 PF13411 MerR HTH family regulatory protein JS608_00955 PF00155 Aminotransferase class I and II JS608_00955 PF00392 Bacterial regulatory proteins, gntR family JS608_00958 PF07690 Major Facilitator Superfamily JS608_00959 PF16859 Tetracyclin repressor-like, C-terminal domain JS608_00959 PF00440 Bacterial regulatory proteins, tetR family JS608_00961 PF07875 Coat F domain JS608_00964 PF07875 Coat F domain JS608_00966 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_00966 PF07730 Histidine kinase JS608_00967 PF00196 Bacterial regulatory proteins, luxR family JS608_00967 PF00072 Response regulator receiver domain JS608_00968 PF03176 MMPL family JS608_00969 PF07722 Peptidase C26 JS608_00970 PF00005 ABC transporter JS608_00970 PF12848 ABC transporter JS608_00971 PF12848 ABC transporter JS608_00971 PF00005 ABC transporter JS608_00972 PF13302 Acetyltransferase (GNAT) domain JS608_00973 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JS608_00973 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JS608_00974 PF00465 Iron-containing alcohol dehydrogenase JS608_00975 PF07690 Major Facilitator Superfamily JS608_00976 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_00976 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_00978 PF01925 Sulfite exporter TauE/SafE JS608_00979 PF00583 Acetyltransferase (GNAT) family JS608_00980 PF06445 GyrI-like small molecule binding domain JS608_00980 PF13411 MerR HTH family regulatory protein JS608_00981 PF00892 EamA-like transporter family JS608_00982 PF00293 NUDIX domain JS608_00983 PF08241 Methyltransferase domain JS608_00984 PF00180 Isocitrate/isopropylmalate dehydrogenase JS608_00986 PF00180 Isocitrate/isopropylmalate dehydrogenase JS608_00987 PF00392 Bacterial regulatory proteins, gntR family JS608_00987 PF07729 FCD domain JS608_00988 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JS608_00991 PF00144 Beta-lactamase JS608_00991 PF11954 Domain of unknown function (DUF3471) JS608_00993 PF07563 Protein of unknown function (DUF1541) JS608_00994 PF07690 Major Facilitator Superfamily JS608_00995 PF00392 Bacterial regulatory proteins, gntR family JS608_00995 PF07702 UTRA domain JS608_00996 PF00392 Bacterial regulatory proteins, gntR family JS608_00996 PF07729 FCD domain JS608_00997 PF07690 Major Facilitator Superfamily JS608_00998 PF00893 Small Multidrug Resistance protein JS608_00999 PF00893 Small Multidrug Resistance protein JS608_01000 PF17934 Tetracyclin repressor-like, C-terminal domain JS608_01000 PF00440 Bacterial regulatory proteins, tetR family JS608_01003 PF08327 Activator of Hsp90 ATPase homolog 1-like protein JS608_01004 PF00107 Zinc-binding dehydrogenase JS608_01004 PF08240 Alcohol dehydrogenase GroES-like domain JS608_01005 PF00083 Sugar (and other) transporter JS608_01013 PF00586 AIR synthase related protein, N-terminal domain JS608_01013 PF02769 AIR synthase related protein, C-terminal domain JS608_01014 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JS608_01015 PF00814 Glycoprotease family JS608_01016 PF00583 Acetyltransferase (GNAT) family JS608_01017 PF00814 Glycoprotease family JS608_01018 PF16326 ABC transporter C-terminal domain JS608_01018 PF00005 ABC transporter JS608_01018 PF12848 ABC transporter JS608_01019 PF01967 MoaC family JS608_01020 PF06971 Putative DNA-binding protein N-terminus JS608_01020 PF02629 CoA binding domain JS608_01021 PF02416 mttA/Hcf106 family JS608_01022 PF00902 Sec-independent protein translocase protein (TatC) JS608_01023 PF14146 Domain of unknown function (DUF4305) JS608_01024 PF02517 CPBP intramembrane metalloprotease JS608_01025 PF00166 Chaperonin 10 Kd subunit JS608_01026 PF00118 TCP-1/cpn60 chaperonin family JS608_01027 PF00589 Phage integrase family JS608_01027 PF14659 Phage integrase, N-terminal SAM-like domain JS608_01028 PF06114 IrrE N-terminal-like domain JS608_01030 PF01381 Helix-turn-helix JS608_01036 PF01381 Helix-turn-helix JS608_01037 PF17448 Uncharacterized YqaH-like JS608_01038 PF09466 Hypothetical protein Yqai JS608_01043 PF07261 Replication initiation and membrane attachment JS608_01044 PF01695 IstB-like ATP binding protein JS608_01046 PF05866 Endodeoxyribonuclease RusA JS608_01048 PF17356 Phage-like element PBSX protein XtrA JS608_01059 PF08281 Sigma-70, region 4 JS608_01064 PF10668 Phage terminase small subunit JS608_01077 PF00041 Fibronectin type III domain JS608_01077 PF00704 Glycosyl hydrolases family 18 JS608_01086 PF05105 Bacteriophage holin family JS608_01087 PF01510 N-acetylmuramoyl-L-alanine amidase JS608_01087 PF01471 Putative peptidoglycan binding domain JS608_01090 PF00931 NB-ARC domain JS608_01090 PF13176 Tetratricopeptide repeat JS608_01091 PF08240 Alcohol dehydrogenase GroES-like domain JS608_01091 PF00107 Zinc-binding dehydrogenase JS608_01093 PF00294 pfkB family carbohydrate kinase JS608_01094 PF14154 Domain of unknown function (DUF4306) JS608_01095 PF04012 PspA/IM30 family JS608_01096 PF08271 TFIIB zinc-binding JS608_01097 PF04536 TPM domain JS608_01098 PF13421 SPFH domain-Band 7 family JS608_01099 PF01757 Acyltransferase family JS608_01100 PF11738 Protein of unknown function (DUF3298) JS608_01100 PF13739 Deacetylase PdaC JS608_01101 PF04542 Sigma-70 region 2 JS608_01101 PF08281 Sigma-70, region 4 JS608_01102 PF00107 Zinc-binding dehydrogenase JS608_01102 PF08240 Alcohol dehydrogenase GroES-like domain JS608_01103 PF03330 Lytic transglycolase JS608_01104 PF07676 WD40-like Beta Propeller Repeat JS608_01106 PF14169 Cold-inducible protein YdjO JS608_01107 PF00394 Multicopper oxidase JS608_01107 PF07731 Multicopper oxidase JS608_01107 PF07732 Multicopper oxidase JS608_01108 PF00324 Amino acid permease JS608_01109 PF07726 ATPase family associated with various cellular activities (AAA) JS608_01109 PF17863 AAA lid domain JS608_01110 PF01882 Protein of unknown function DUF58 JS608_01111 PF11992 Domain of unknown function (DUF3488) JS608_01111 PF13559 Domain of unknown function (DUF4129) JS608_01111 PF01841 Transglutaminase-like superfamily JS608_01112 PF00117 Glutamine amidotransferase class-I JS608_01112 PF00958 GMP synthase C terminal domain JS608_01112 PF02540 NAD synthase JS608_01113 PF04545 Sigma-70, region 4 JS608_01113 PF04542 Sigma-70 region 2 JS608_01115 PF00860 Permease family JS608_01117 PF13076 Fur-regulated basic protein A JS608_01118 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JS608_01119 PF14044 NETI protein JS608_01120 PF00731 AIR carboxylase JS608_01121 PF02222 ATP-grasp domain JS608_01121 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JS608_01122 PF00206 Lyase JS608_01122 PF10397 Adenylosuccinate lyase C-terminus JS608_01123 PF01259 SAICAR synthetase JS608_01124 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JS608_01126 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JS608_01126 PF02769 AIR synthase related protein, C-terminal domain JS608_01126 PF00586 AIR synthase related protein, N-terminal domain JS608_01127 PF00156 Phosphoribosyl transferase domain JS608_01128 PF00586 AIR synthase related protein, N-terminal domain JS608_01128 PF02769 AIR synthase related protein, C-terminal domain JS608_01129 PF00551 Formyl transferase JS608_01130 PF01808 AICARFT/IMPCHase bienzyme JS608_01130 PF02142 MGS-like domain JS608_01131 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JS608_01131 PF02843 Phosphoribosylglycinamide synthetase, C domain JS608_01131 PF02844 Phosphoribosylglycinamide synthetase, N domain JS608_01132 PF11127 Protein of unknown function (DUF2892) JS608_01133 PF13382 Adenine deaminase C-terminal domain JS608_01133 PF01979 Amidohydrolase family JS608_01134 PF11258 Protein of unknown function (DUF3048) N-terminal domain JS608_01134 PF17479 Protein of unknown function (DUF3048) C-terminal domain JS608_01135 PF01371 Trp repressor protein JS608_01136 PF01645 Conserved region in glutamate synthase JS608_01137 PF01884 PcrB family JS608_01138 PF00580 UvrD/REP helicase N-terminal domain JS608_01138 PF13361 UvrD-like helicase C-terminal domain JS608_01139 PF00533 BRCA1 C Terminus (BRCT) domain JS608_01139 PF03120 NAD-dependent DNA ligase OB-fold domain JS608_01139 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JS608_01139 PF12826 Helix-hairpin-helix motif JS608_01139 PF01653 NAD-dependent DNA ligase adenylation domain JS608_01140 PF07537 CamS sex pheromone cAM373 precursor JS608_01141 PF01636 Phosphotransferase enzyme family JS608_01142 PF02308 MgtC family JS608_01143 PF00474 Sodium:solute symporter family JS608_01144 PF02686 Glu-tRNAGln amidotransferase C subunit JS608_01145 PF01425 Amidase JS608_01146 PF02934 GatB/GatE catalytic domain JS608_01146 PF02637 GatB domain JS608_01147 PF00440 Bacterial regulatory proteins, tetR family JS608_01148 PF00873 AcrB/AcrD/AcrF family JS608_01149 PF00781 Diacylglycerol kinase catalytic domain JS608_01150 PF01938 TRAM domain JS608_01150 PF05958 tRNA (Uracil-5-)-methyltransferase JS608_01152 PF00005 ABC transporter JS608_01154 PF04634 Protein of unknown function, DUF600 JS608_01155 PF04634 Protein of unknown function, DUF600 JS608_01156 PF04634 Protein of unknown function, DUF600 JS608_01157 PF04634 Protein of unknown function, DUF600 JS608_01158 PF04634 Protein of unknown function, DUF600 JS608_01159 PF04740 LXG domain of WXG superfamily JS608_01160 PF01709 Transcriptional regulator JS608_01162 PF04439 Streptomycin adenylyltransferase JS608_01163 PF11007 Spore coat associated protein JA (CotJA) JS608_01164 PF12652 CotJB protein JS608_01165 PF05067 Manganese containing catalase JS608_01166 PF00583 Acetyltransferase (GNAT) family JS608_01168 PF04239 Protein of unknown function (DUF421) JS608_01169 PF03992 Antibiotic biosynthesis monooxygenase JS608_01170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JS608_01171 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain JS608_01171 PF01740 STAS domain JS608_01172 PF10055 Uncharacterized small protein (DUF2292) JS608_01173 PF01687 Riboflavin kinase JS608_01174 PF01027 Inhibitor of apoptosis-promoting Bax1 JS608_01176 PF01047 MarR family JS608_01177 PF01494 FAD binding domain JS608_01178 PF13037 Domain of unknown function (DUF3898) JS608_01178 PF13039 Protein of unknown function (DUF3900) JS608_01179 PF00067 Cytochrome P450 JS608_01179 PF00175 Oxidoreductase NAD-binding domain JS608_01179 PF00258 Flavodoxin JS608_01179 PF00667 FAD binding domain JS608_01180 PF00884 Sulfatase JS608_01181 PF00483 Nucleotidyl transferase JS608_01182 PF16363 GDP-mannose 4,6 dehydratase JS608_01183 PF03407 Nucleotide-diphospho-sugar transferase JS608_01184 PF00535 Glycosyl transferase family 2 JS608_01185 PF03407 Nucleotide-diphospho-sugar transferase JS608_01186 PF07690 Major Facilitator Superfamily JS608_01187 PF13520 Amino acid permease JS608_01188 PF00171 Aldehyde dehydrogenase family JS608_01189 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JS608_01191 PF13181 Tetratricopeptide repeat JS608_01191 PF00535 Glycosyl transferase family 2 JS608_01192 PF12848 ABC transporter JS608_01192 PF00005 ABC transporter JS608_01192 PF16326 ABC transporter C-terminal domain JS608_01193 PF13411 MerR HTH family regulatory protein JS608_01194 PF07690 Major Facilitator Superfamily JS608_01195 PF12848 ABC transporter JS608_01195 PF00005 ABC transporter JS608_01196 PF00271 Helicase conserved C-terminal domain JS608_01196 PF00270 DEAD/DEAH box helicase JS608_01197 PF00583 Acetyltransferase (GNAT) family JS608_01198 PF16884 N-terminal domain of oxidoreductase JS608_01198 PF00107 Zinc-binding dehydrogenase JS608_01199 PF11486 Protein of unknown function (DUF3212) JS608_01200 PF11181 Heat induced stress protein YflT JS608_01201 PF00544 Pectate lyase JS608_01202 PF00939 Sodium:sulfate symporter transmembrane region JS608_01207 PF06580 Histidine kinase JS608_01207 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_01208 PF00072 Response regulator receiver domain JS608_01208 PF04397 LytTr DNA-binding domain JS608_01210 PF04203 Sortase domain JS608_01211 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_01211 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JS608_01212 PF12431 Transcriptional regulator JS608_01212 PF08279 HTH domain JS608_01212 PF00072 Response regulator receiver domain JS608_01214 PF03401 Tripartite tricarboxylate transporter family receptor JS608_01215 PF03600 Citrate transporter JS608_01216 PF00753 Metallo-beta-lactamase superfamily JS608_01217 PF02898 Nitric oxide synthase, oxygenase domain JS608_01218 PF00708 Acylphosphatase JS608_01219 PF03473 MOSC domain JS608_01219 PF03475 3-alpha domain JS608_01220 PF11121 Protein of unknown function (DUF2639) JS608_01222 PF11588 Protein of unknown function (DUF3243) JS608_01223 PF00557 Metallopeptidase family M24 JS608_01224 PF02378 Phosphotransferase system, EIIC JS608_01224 PF00367 phosphotransferase system, EIIB JS608_01225 PF10787 Uncharacterised protein from bacillus cereus group JS608_01226 PF10787 Uncharacterised protein from bacillus cereus group JS608_01227 PF00884 Sulfatase JS608_01228 PF09350 Domain of unknown function (DUF1992) JS608_01229 PF00011 Hsp20/alpha crystallin family JS608_01230 PF10676 Spore germination protein gerPA/gerPF JS608_01231 PF10676 Spore germination protein gerPA/gerPF JS608_01232 PF02378 Phosphotransferase system, EIIC JS608_01232 PF00367 phosphotransferase system, EIIB JS608_01233 PF00128 Alpha amylase, catalytic domain JS608_01233 PF16657 Maltogenic Amylase, C-terminal domain JS608_01234 PF00392 Bacterial regulatory proteins, gntR family JS608_01234 PF07702 UTRA domain JS608_01235 PF00881 Nitroreductase family JS608_01238 PF02872 5'-nucleotidase, C-terminal domain JS608_01238 PF00149 Calcineurin-like phosphoesterase JS608_01239 PF01965 DJ-1/PfpI family JS608_01240 PF00356 Bacterial regulatory proteins, lacI family JS608_01241 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JS608_01241 PF08501 Shikimate dehydrogenase substrate binding domain JS608_01242 PF01487 Type I 3-dehydroquinase JS608_01243 PF07690 Major Facilitator Superfamily JS608_01244 PF06569 Protein of unknown function (DUF1128) JS608_01247 PF03631 Virulence factor BrkB JS608_01249 PF07690 Major Facilitator Superfamily JS608_01250 PF01699 Sodium/calcium exchanger protein JS608_01251 PF14167 YfkD-like protein JS608_01252 PF00924 Mechanosensitive ion channel JS608_01253 PF08756 YfkB-like domain JS608_01253 PF04055 Radical SAM superfamily JS608_01255 PF01522 Polysaccharide deacetylase JS608_01256 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JS608_01256 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JS608_01258 PF01544 CorA-like Mg2+ transporter protein JS608_01259 PF00730 HhH-GPD superfamily base excision DNA repair protein JS608_01260 PF05958 tRNA (Uracil-5-)-methyltransferase JS608_01260 PF01938 TRAM domain JS608_01261 PF14118 YfzA-like protein JS608_01262 PF01207 Dihydrouridine synthase (Dus) JS608_01265 PF02779 Transketolase, pyrimidine binding domain JS608_01265 PF02780 Transketolase, C-terminal domain JS608_01266 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JS608_01266 PF00364 Biotin-requiring enzyme JS608_01266 PF02817 e3 binding domain JS608_01267 PF07992 Pyridine nucleotide-disulphide oxidoreductase JS608_01267 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JS608_01268 PF00158 Sigma-54 interaction domain JS608_01268 PF02954 Bacterial regulatory protein, Fis family JS608_01268 PF01590 GAF domain JS608_01269 PF08141 Small acid-soluble spore protein H family JS608_01270 PF11975 Family 4 glycosyl hydrolase C-terminal domain JS608_01270 PF02056 Family 4 glycosyl hydrolase JS608_01271 PF01418 Helix-turn-helix domain, rpiR family JS608_01271 PF01380 SIS domain JS608_01272 PF00367 phosphotransferase system, EIIB JS608_01272 PF02378 Phosphotransferase system, EIIC JS608_01273 PF00367 phosphotransferase system, EIIB JS608_01273 PF02378 Phosphotransferase system, EIIC JS608_01274 PF00005 ABC transporter JS608_01274 PF00664 ABC transporter transmembrane region JS608_01275 PF00664 ABC transporter transmembrane region JS608_01275 PF00005 ABC transporter JS608_01276 PF07681 DoxX JS608_01277 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JS608_01278 PF01040 UbiA prenyltransferase family JS608_01279 PF03551 Transcriptional regulator PadR-like family JS608_01279 PF10400 Virulence activator alpha C-term JS608_01280 PF02525 Flavodoxin-like fold JS608_01281 PF01757 Acyltransferase family JS608_01283 PF01337 Barstar (barnase inhibitor) JS608_01284 PF12867 DinB superfamily JS608_01285 PF07690 Major Facilitator Superfamily JS608_01286 PF01047 MarR family JS608_01287 PF09924 Uncharacterised conserved protein (DUF2156) JS608_01287 PF03706 Lysylphosphatidylglycerol synthase TM region JS608_01288 PF02567 Phenazine biosynthesis-like protein JS608_01289 PF00881 Nitroreductase family JS608_01290 PF14151 YfhD-like protein JS608_01291 PF14152 YfhE-like protein JS608_01293 PF02631 RecX family JS608_01294 PF08838 Protein of unknown function (DUF1811) JS608_01295 PF07690 Major Facilitator Superfamily JS608_01296 PF10794 Protein of unknown function (DUF2606) JS608_01297 PF00089 Trypsin JS608_01298 PF14043 WVELL protein JS608_01299 PF08239 Bacterial SH3 domain JS608_01300 PF13630 SdpI/YhfL protein family JS608_01301 PF00561 alpha/beta hydrolase fold JS608_01302 PF00535 Glycosyl transferase family 2 JS608_01303 PF09586 Bacterial membrane protein YfhO JS608_01304 PF04307 LexA-binding, inner membrane-associated putative hydrolase JS608_01305 PF14815 NUDIX domain JS608_01305 PF00730 HhH-GPD superfamily base excision DNA repair protein JS608_01308 PF04259 Small, acid-soluble spore protein, gamma-type JS608_01309 PF14182 YgaB-like protein JS608_01310 PF04167 Protein of unknown function (DUF402) JS608_01311 PF00005 ABC transporter JS608_01311 PF00664 ABC transporter transmembrane region JS608_01312 PF06081 Aromatic acid exporter family member 1 JS608_01313 PF00202 Aminotransferase class-III JS608_01314 PF00578 AhpC/TSA family JS608_01315 PF01475 Ferric uptake regulator family JS608_01316 PF11023 Zinc-ribbon containing domain JS608_01317 PF14540 Nucleotidyltransferase-like JS608_01317 PF18576 Helix-turn-helix domain JS608_01338 PF03575 Peptidase family S51 JS608_01339 PF13667 ThiC-associated domain JS608_01339 PF01964 Radical SAM ThiC family JS608_01340 PF08031 Berberine and berberine like JS608_01340 PF01565 FAD binding domain JS608_01341 PF13040 Fur-regulated basic protein B JS608_01342 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JS608_01343 PF00528 Binding-protein-dependent transport system inner membrane component JS608_01344 PF00528 Binding-protein-dependent transport system inner membrane component JS608_01344 PF12911 N-terminal TM domain of oligopeptide transport permease C JS608_01345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JS608_01345 PF00005 ABC transporter JS608_01346 PF00005 ABC transporter JS608_01346 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JS608_01347 PF00199 Catalase JS608_01347 PF06628 Catalase-related immune-responsive JS608_01349 PF00005 ABC transporter JS608_01350 PF09084 NMT1/THI5 like JS608_01351 PF00528 Binding-protein-dependent transport system inner membrane component JS608_01352 PF00296 Luciferase-like monooxygenase JS608_01353 PF00253 Ribosomal protein S14p/S29e JS608_01355 PF01381 Helix-turn-helix JS608_01358 PF08331 Domain of unknown function (DUF1730) JS608_01359 PF12671 Putative amidase domain JS608_01360 PF00588 SpoU rRNA Methylase family JS608_01361 PF13171 Protein of unknown function (DUF4004) JS608_01362 PF04519 Polymer-forming cytoskeletal JS608_01366 PF04285 Protein of unknown function (DUF444) JS608_01367 PF01047 MarR family JS608_01369 PF07690 Major Facilitator Superfamily JS608_01370 PF03358 NADPH-dependent FMN reductase JS608_01373 PF00392 Bacterial regulatory proteins, gntR family JS608_01374 PF00005 ABC transporter JS608_01375 PF00005 ABC transporter JS608_01376 PF12679 ABC-2 family transporter protein JS608_01377 PF00313 'Cold-shock' DNA-binding domain JS608_01378 PF03180 NLPA lipoprotein JS608_01379 PF00990 Diguanylate cyclase, GGDEF domain JS608_01379 PF07694 5TMR of 5TMR-LYT JS608_01380 PF00375 Sodium:dicarboxylate symporter family JS608_01382 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JS608_01384 PF07875 Coat F domain JS608_01385 PF02872 5'-nucleotidase, C-terminal domain JS608_01385 PF00746 LPXTG cell wall anchor motif JS608_01385 PF00149 Calcineurin-like phosphoesterase JS608_01385 PF00565 Staphylococcal nuclease homologue JS608_01386 PF04203 Sortase domain JS608_01387 PF01479 S4 domain JS608_01387 PF00849 RNA pseudouridylate synthase JS608_01388 PF17326 Family of unknown function (DUF5365) JS608_01389 PF00571 CBS domain JS608_01390 PF13419 Haloacid dehalogenase-like hydrolase JS608_01391 PF00583 Acetyltransferase (GNAT) family JS608_01391 PF00795 Carbon-nitrogen hydrolase JS608_01393 PF04309 Glycerol-3-phosphate responsive antiterminator JS608_01394 PF00230 Major intrinsic protein JS608_01395 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JS608_01395 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JS608_01396 PF01266 FAD dependent oxidoreductase JS608_01396 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JS608_01397 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JS608_01397 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JS608_01397 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JS608_01397 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JS608_01398 PF13185 GAF domain JS608_01398 PF07730 Histidine kinase JS608_01399 PF00196 Bacterial regulatory proteins, luxR family JS608_01399 PF00072 Response regulator receiver domain JS608_01400 PF03358 NADPH-dependent FMN reductase JS608_01401 PF14148 YhdB-like protein JS608_01402 PF13028 Protein of unknown function (DUF3889) JS608_01403 PF00877 NlpC/P60 family JS608_01403 PF01476 LysM domain JS608_01404 PF02082 Transcriptional regulator JS608_01405 PF05552 Conserved TM helix JS608_01406 PF04293 SpoVR like protein JS608_01407 PF00245 Alkaline phosphatase JS608_01408 PF01476 LysM domain JS608_01408 PF00877 NlpC/P60 family JS608_01409 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_01409 PF03466 LysR substrate binding domain JS608_01410 PF00285 Citrate synthase, C-terminal domain JS608_01412 PF13520 Amino acid permease JS608_01413 PF00209 Sodium:neurotransmitter symporter family JS608_01414 PF17453 Sigma-M inhibitor JS608_01415 PF13791 Sigma factor regulator C-terminal JS608_01415 PF13800 Sigma factor regulator N-terminal JS608_01416 PF08281 Sigma-70, region 4 JS608_01416 PF04542 Sigma-70 region 2 JS608_01417 PF01553 Acyltransferase JS608_01418 PF00571 CBS domain JS608_01418 PF03471 Transporter associated domain JS608_01418 PF01595 Cyclin M transmembrane N-terminal domain JS608_01419 PF13411 MerR HTH family regulatory protein JS608_01420 PF00155 Aminotransferase class I and II JS608_01421 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_01421 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_01422 PF00571 CBS domain JS608_01422 PF03471 Transporter associated domain JS608_01422 PF01595 Cyclin M transmembrane N-terminal domain JS608_01423 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JS608_01424 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JS608_01425 PF03009 Glycerophosphoryl diester phosphodiesterase family JS608_01426 PF17444 Uncharacterized YhdX-like JS608_01427 PF00924 Mechanosensitive ion channel JS608_01428 PF02146 Sir2 family JS608_01429 PF01522 Polysaccharide deacetylase JS608_01430 PF01063 Amino-transferase class IV JS608_01431 PF13977 BetI-type transcriptional repressor, C-terminal JS608_01431 PF00440 Bacterial regulatory proteins, tetR family JS608_01433 PF00582 Universal stress protein family JS608_01435 PF00664 ABC transporter transmembrane region JS608_01435 PF00005 ABC transporter JS608_01436 PF00664 ABC transporter transmembrane region JS608_01436 PF00005 ABC transporter JS608_01437 PF13460 NAD(P)H-binding JS608_01439 PF00269 Small, acid-soluble spore proteins, alpha/beta type JS608_01440 PF17277 Family of unknown function (DUF5342) JS608_01441 PF14398 YheC/D like ATP-grasp JS608_01442 PF14398 YheC/D like ATP-grasp JS608_01443 PF04286 Protein of unknown function (DUF445) JS608_01444 PF06133 Control of competence regulator ComK, YlbF/YmcA JS608_01445 PF08713 DNA alkylation repair enzyme JS608_01447 PF04055 Radical SAM superfamily JS608_01449 PF00999 Sodium/hydrogen exchanger family JS608_01450 PF02080 TrkA-C domain JS608_01452 PF00378 Enoyl-CoA hydratase/isomerase JS608_01453 PF14120 YhzD-like protein JS608_01454 PF00005 ABC transporter JS608_01454 PF13732 Domain of unknown function (DUF4162) JS608_01456 PF00149 Calcineurin-like phosphoesterase JS608_01457 PF13514 AAA domain JS608_01458 PF01966 HD domain JS608_01459 PF14147 Sporulation protein YhaL JS608_01461 PF11667 Putative zincin peptidase JS608_01462 PF08963 Protein of unknown function (DUF1878) JS608_01463 PF01047 MarR family JS608_01464 PF12732 YtxH-like protein JS608_01466 PF17099 Tryptophan transporter TrpP JS608_01467 PF00266 Aminotransferase class-V JS608_01468 PF01230 HIT domain JS608_01469 PF00005 ABC transporter JS608_01470 PF05975 Bacterial ABC transporter protein EcsB JS608_01471 PF12787 EcsC protein family JS608_01472 PF01546 Peptidase family M20/M25/M40 JS608_01472 PF07687 Peptidase dimerisation domain JS608_01474 PF03992 Antibiotic biosynthesis monooxygenase JS608_01475 PF00905 Penicillin binding protein transpeptidase domain JS608_01475 PF00912 Transglycosylase JS608_01476 PF01208 Uroporphyrinogen decarboxylase (URO-D) JS608_01477 PF00762 Ferrochelatase JS608_01479 PF00440 Bacterial regulatory proteins, tetR family JS608_01479 PF17932 Tetracyclin repressor-like, C-terminal domain JS608_01481 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JS608_01481 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JS608_01483 PF05343 M42 glutamyl aminopeptidase JS608_01484 PF00375 Sodium:dicarboxylate symporter family JS608_01485 PF14149 YhfH-like protein JS608_01486 PF12706 Beta-lactamase superfamily domain JS608_01487 PF03099 Biotin/lipoate A/B protein ligase family JS608_01487 PF10437 Bacterial lipoate protein ligase C-terminus JS608_01488 PF13460 NAD(P)H-binding JS608_01489 PF00501 AMP-binding enzyme JS608_01489 PF13193 AMP-binding enzyme C-terminal domain JS608_01491 PF01435 Peptidase family M48 JS608_01491 PF16491 CAAX prenyl protease N-terminal, five membrane helices JS608_01492 PF00082 Subtilase family JS608_01492 PF05922 Peptidase inhibitor I9 JS608_01493 PF01497 Periplasmic binding protein JS608_01494 PF00300 Histidine phosphatase superfamily (branch 1) JS608_01495 PF00108 Thiolase, N-terminal domain JS608_01495 PF02803 Thiolase, C-terminal domain JS608_01496 PF00501 AMP-binding enzyme JS608_01496 PF13193 AMP-binding enzyme C-terminal domain JS608_01497 PF02632 BioY family JS608_01498 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JS608_01499 PF01266 FAD dependent oxidoreductase JS608_01499 PF00355 Rieske [2Fe-2S] domain JS608_01501 PF08858 IDEAL domain JS608_01502 PF06338 ComK protein JS608_01504 PF08818 Domain of unknown function (DU1801) JS608_01505 PF15493 Domain of unknown function, YrpD JS608_01506 PF05901 Excalibur calcium-binding domain JS608_01507 PF01906 Putative heavy-metal-binding JS608_01508 PF00474 Sodium:solute symporter family JS608_01509 PF11755 Protein of unknown function (DUF3311) JS608_01511 PF09335 SNARE associated Golgi protein JS608_01512 PF10502 Signal peptidase, peptidase S26 JS608_01514 PF01494 FAD binding domain JS608_01515 PF01047 MarR family JS608_01516 PF05145 Transition state regulatory protein AbrB JS608_01517 PF07690 Major Facilitator Superfamily JS608_01518 PF08361 MAATS-type transcriptional repressor, C-terminal region JS608_01518 PF00440 Bacterial regulatory proteins, tetR family JS608_01519 PF02915 Rubrerythrin JS608_01520 PF04239 Protein of unknown function (DUF421) JS608_01521 PF12705 PD-(D/E)XK nuclease superfamily JS608_01521 PF13361 UvrD-like helicase C-terminal domain JS608_01522 PF13361 UvrD-like helicase C-terminal domain JS608_01522 PF00580 UvrD/REP helicase N-terminal domain JS608_01522 PF12705 PD-(D/E)XK nuclease superfamily JS608_01523 PF12320 Type 5 capsule protein repressor C-terminal domain JS608_01523 PF00149 Calcineurin-like phosphoesterase JS608_01524 PF13476 AAA domain JS608_01526 PF10676 Spore germination protein gerPA/gerPF JS608_01527 PF10970 Spore germination protein GerPE JS608_01529 PF10737 Spore germination protein GerPC JS608_01530 PF10803 Spore germination GerPB JS608_01531 PF10676 Spore germination protein gerPA/gerPF JS608_01532 PF09388 Spo0E like sporulation regulatory protein JS608_01533 PF01557 Fumarylacetoacetate (FAA) hydrolase family JS608_01534 PF07457 Protein of unknown function (DUF1516) JS608_01535 PF10949 Protein of unknown function (DUF2777) JS608_01536 PF00733 Asparagine synthase JS608_01536 PF13537 Glutamine amidotransferase domain JS608_01538 PF01554 MatE JS608_01539 PF02311 AraC-like ligand binding domain JS608_01539 PF12833 Helix-turn-helix domain JS608_01540 PF00356 Bacterial regulatory proteins, lacI family JS608_01541 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JS608_01541 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JS608_01542 PF05163 DinB family JS608_01543 PF13599 Pentapeptide repeats (9 copies) JS608_01544 PF13673 Acetyltransferase (GNAT) domain JS608_01545 PF02219 Methylenetetrahydrofolate reductase JS608_01545 PF02574 Homocysteine S-methyltransferase JS608_01546 PF04461 Protein of unknown function (DUF520) JS608_01547 PF17783 CvfB-like winged helix domain JS608_01547 PF13509 S1 domain JS608_01548 PF02608 ABC transporter substrate-binding protein PnrA-like JS608_01549 PF00672 HAMP domain JS608_01549 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JS608_01551 PF02645 Uncharacterised protein, DegV family COG1307 JS608_01552 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JS608_01552 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JS608_01553 PF12690 Intracellular proteinase inhibitor JS608_01554 PF12758 Protein of unknown function (DUF3813) JS608_01557 PF00326 Prolyl oligopeptidase family JS608_01558 PF01883 Iron-sulfur cluster assembly protein JS608_01559 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JS608_01560 PF01565 FAD binding domain JS608_01561 PF07690 Major Facilitator Superfamily JS608_01562 PF01118 Semialdehyde dehydrogenase, NAD binding domain JS608_01562 PF02774 Semialdehyde dehydrogenase, dimerisation domain JS608_01563 PF01960 ArgJ family JS608_01564 PF00696 Amino acid kinase family JS608_01565 PF00202 Aminotransferase class-III JS608_01566 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JS608_01566 PF00117 Glutamine amidotransferase class-I JS608_01568 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JS608_01568 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JS608_01569 PF14168 YjzC-like protein JS608_01570 PF11151 Protein of unknown function (DUF2929) JS608_01573 PF02608 ABC transporter substrate-binding protein PnrA-like JS608_01574 PF10815 ComZ JS608_01576 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JS608_01576 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JS608_01577 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_01577 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_01578 PF10026 Predicted Zn-dependent protease (DUF2268) JS608_01579 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JS608_01579 PF00005 ABC transporter JS608_01580 PF00005 ABC transporter JS608_01580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JS608_01581 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JS608_01582 PF00528 Binding-protein-dependent transport system inner membrane component JS608_01583 PF00528 Binding-protein-dependent transport system inner membrane component JS608_01583 PF12911 N-terminal TM domain of oligopeptide transport permease C JS608_01584 PF12227 Protein of unknown function (DUF3603) JS608_01585 PF00579 tRNA synthetases class I (W and Y) JS608_01586 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JS608_01587 PF00528 Binding-protein-dependent transport system inner membrane component JS608_01588 PF00528 Binding-protein-dependent transport system inner membrane component JS608_01588 PF12911 N-terminal TM domain of oligopeptide transport permease C JS608_01589 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JS608_01589 PF00005 ABC transporter JS608_01590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JS608_01590 PF00005 ABC transporter JS608_01592 PF13508 Acetyltransferase (GNAT) domain JS608_01593 PF03960 ArsC family JS608_01594 PF03741 Integral membrane protein TerC family JS608_01595 PF05389 Negative regulator of genetic competence (MecA) JS608_01596 PF06054 Competence protein CoiA-like family JS608_01597 PF01432 Peptidase family M3 JS608_01597 PF08439 Oligopeptidase F JS608_01600 PF01152 Bacterial-like globin JS608_01601 PF01464 Transglycosylase SLT domain JS608_01602 PF01928 CYTH domain JS608_01604 PF04607 Region found in RelA / SpoT proteins JS608_01605 PF01513 ATP-NAD kinase JS608_01606 PF00849 RNA pseudouridylate synthase JS608_01607 PF00149 Calcineurin-like phosphoesterase JS608_01608 PF00999 Sodium/hydrogen exchanger family JS608_01608 PF02080 TrkA-C domain JS608_01608 PF02254 TrkA-N domain JS608_01609 PF03070 TENA/THI-4/PQQC family JS608_01610 PF02581 Thiamine monophosphate synthase JS608_01611 PF01266 FAD dependent oxidoreductase JS608_01612 PF02597 ThiS family JS608_01613 PF05690 Thiazole biosynthesis protein ThiG JS608_01614 PF00899 ThiF family JS608_01615 PF08543 Phosphomethylpyrimidine kinase JS608_01617 PF14153 Spore coat protein CotO JS608_01618 PF10612 Spore coat protein Z JS608_01619 PF10612 Spore coat protein Z JS608_01620 PF07552 Spore Coat Protein X and V domain JS608_01622 PF07552 Spore Coat Protein X and V domain JS608_01623 PF07098 Protein of unknown function (DUF1360) JS608_01627 PF14069 Stage VI sporulation protein F JS608_01628 PF00580 UvrD/REP helicase N-terminal domain JS608_01628 PF13361 UvrD-like helicase C-terminal domain JS608_01630 PF00753 Metallo-beta-lactamase superfamily JS608_01632 PF00005 ABC transporter JS608_01635 PF13673 Acetyltransferase (GNAT) domain JS608_01637 PF00756 Putative esterase JS608_01638 PF01053 Cys/Met metabolism PLP-dependent enzyme JS608_01639 PF01053 Cys/Met metabolism PLP-dependent enzyme JS608_01641 PF18593 CdiI immunity protein JS608_01642 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH JS608_01642 PF04740 LXG domain of WXG superfamily JS608_01644 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JS608_01646 PF03992 Antibiotic biosynthesis monooxygenase JS608_01647 PF07690 Major Facilitator Superfamily JS608_01648 PF01047 MarR family JS608_01649 PF07745 Glycosyl hydrolase family 53 JS608_01650 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JS608_01650 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JS608_01651 PF16363 GDP-mannose 4,6 dehydratase JS608_01652 PF10509 Galactokinase galactose-binding signature JS608_01652 PF08544 GHMP kinases C terminal JS608_01652 PF00288 GHMP kinases N terminal domain JS608_01653 PF02378 Phosphotransferase system, EIIC JS608_01653 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JS608_01654 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JS608_01655 PF00232 Glycosyl hydrolase family 1 JS608_01656 PF00455 DeoR C terminal sensor domain JS608_01656 PF08220 DeoR-like helix-turn-helix domain JS608_01660 PF02308 MgtC family JS608_01662 PF14070 Putative motility protein JS608_01663 PF10990 Protein of unknown function (DUF2809) JS608_01664 PF14172 Domain of unknown function (DUF4309) JS608_01665 PF12838 4Fe-4S dicluster domain JS608_01665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JS608_01665 PF00384 Molybdopterin oxidoreductase JS608_01665 PF01568 Molydopterin dinucleotide binding domain JS608_01665 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JS608_01666 PF07849 Protein of unknown function (DUF1641) JS608_01667 PF00067 Cytochrome P450 JS608_01668 PF04101 Glycosyltransferase family 28 C-terminal domain JS608_01670 PF02602 Uroporphyrinogen-III synthase HemD JS608_01671 PF03649 Uncharacterised protein family (UPF0014) JS608_01672 PF00005 ABC transporter JS608_01673 PF13536 Putative multidrug resistance efflux transporter JS608_01675 PF07849 Protein of unknown function (DUF1641) JS608_01676 PF07992 Pyridine nucleotide-disulphide oxidoreductase JS608_01677 PF02614 Glucuronate isomerase JS608_01679 PF00356 Bacterial regulatory proteins, lacI family JS608_01680 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JS608_01680 PF08666 SAF domain JS608_01681 PF00072 Response regulator receiver domain JS608_01681 PF00486 Transcriptional regulatory protein, C terminal JS608_01682 PF00672 HAMP domain JS608_01682 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_01682 PF00512 His Kinase A (phospho-acceptor) domain JS608_01683 PF00005 ABC transporter JS608_01686 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_01686 PF07730 Histidine kinase JS608_01687 PF00196 Bacterial regulatory proteins, luxR family JS608_01687 PF00072 Response regulator receiver domain JS608_01690 PF00664 ABC transporter transmembrane region JS608_01690 PF00005 ABC transporter JS608_01690 PF03412 Peptidase C39 family JS608_01692 PF13575 Domain of unknown function (DUF4135) JS608_01692 PF05147 Lanthionine synthetase C-like protein JS608_01693 PF01925 Sulfite exporter TauE/SafE JS608_01694 PF05163 DinB family JS608_01697 PF01476 LysM domain JS608_01697 PF01471 Putative peptidoglycan binding domain JS608_01697 PF01510 N-acetylmuramoyl-L-alanine amidase JS608_01698 PF08000 Bacterial PH domain JS608_01699 PF05908 Poly-gamma-glutamate hydrolase JS608_01701 PF06114 IrrE N-terminal-like domain JS608_01702 PF01381 Helix-turn-helix JS608_01705 PF01695 IstB-like ATP binding protein JS608_01708 PF17356 Phage-like element PBSX protein XtrA JS608_01709 PF08281 Sigma-70, region 4 JS608_01710 PF10668 Phage terminase small subunit JS608_01710 PF03592 Terminase small subunit JS608_01711 PF04466 Phage terminase large subunit JS608_01711 PF17288 Terminase RNAseH like domain JS608_01712 PF04860 Phage portal protein JS608_01713 PF14550 Putative phage serine protease XkdF JS608_01714 PF05065 Phage capsid family JS608_01715 PF11436 Protein of unknown function (DUF3199) JS608_01716 PF12206 Domain of unknown function (DUF3599) JS608_01717 PF04883 Bacteriophage HK97-gp10, putative tail-component JS608_01720 PF17482 Phage tail sheath C-terminal domain JS608_01720 PF04984 Phage tail sheath protein subtilisin-like domain JS608_01720 PF17481 Phage tail sheath protein beta-sandwich domain JS608_01721 PF09393 Phage tail tube protein JS608_01722 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC JS608_01724 PF01464 Transglycosylase SLT domain JS608_01724 PF01464 Transglycosylase SLT domain JS608_01724 PF01464 Transglycosylase SLT domain JS608_01725 PF01476 LysM domain JS608_01727 PF10844 Protein of unknown function (DUF2577) JS608_01728 PF10934 Protein of unknown function (DUF2634) JS608_01729 PF04865 Baseplate J-like protein JS608_01730 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) JS608_01734 PF09693 Phage uncharacterised protein (Phage_XkdX) JS608_01736 PF10779 Haemolysin XhlA JS608_01737 PF04688 SPP1 phage holin JS608_01738 PF01510 N-acetylmuramoyl-L-alanine amidase JS608_01738 PF01476 LysM domain JS608_01738 PF01471 Putative peptidoglycan binding domain JS608_01739 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system JS608_01740 PF14171 Toxin SpoIISA, type II toxin-antitoxin system JS608_01741 PF01384 Phosphate transporter family JS608_01742 PF01865 Protein of unknown function DUF47 JS608_01743 PF13520 Amino acid permease JS608_01744 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JS608_01745 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase JS608_01746 PF00535 Glycosyl transferase family 2 JS608_01748 PF13180 PDZ domain JS608_01749 PF07690 Major Facilitator Superfamily JS608_01750 PF04951 D-aminopeptidase JS608_01751 PF00528 Binding-protein-dependent transport system inner membrane component JS608_01752 PF00528 Binding-protein-dependent transport system inner membrane component JS608_01752 PF12911 N-terminal TM domain of oligopeptide transport permease C JS608_01753 PF00005 ABC transporter JS608_01753 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JS608_01754 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JS608_01755 PF02016 LD-carboxypeptidase N-terminal domain JS608_01755 PF17676 LD-carboxypeptidase C-terminal domain JS608_01756 PF13378 Enolase C-terminal domain-like JS608_01756 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JS608_01757 PF00877 NlpC/P60 family JS608_01758 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JS608_01758 PF00005 ABC transporter JS608_01759 PF10282 Lactonase, 7-bladed beta-propeller JS608_01761 PF03061 Thioesterase superfamily JS608_01762 PF13302 Acetyltransferase (GNAT) domain JS608_01763 PF00893 Small Multidrug Resistance protein JS608_01764 PF00893 Small Multidrug Resistance protein JS608_01765 PF01842 ACT domain JS608_01765 PF00551 Formyl transferase JS608_01766 PF00696 Amino acid kinase family JS608_01766 PF01472 PUA domain JS608_01767 PF00171 Aldehyde dehydrogenase family JS608_01768 PF02566 OsmC-like protein JS608_01769 PF01047 MarR family JS608_01770 PF02566 OsmC-like protein JS608_01773 PF00535 Glycosyl transferase family 2 JS608_01773 PF13181 Tetratricopeptide repeat JS608_01775 PF12832 MFS_1 like family JS608_01776 PF00027 Cyclic nucleotide-binding domain JS608_01777 PF08267 Cobalamin-independent synthase, N-terminal domain JS608_01777 PF01717 Cobalamin-independent synthase, Catalytic domain JS608_01778 PF00082 Subtilase family JS608_01779 PF01740 STAS domain JS608_01780 PF02361 Cobalt transport protein JS608_01781 PF00005 ABC transporter JS608_01782 PF09819 ABC-type cobalt transport system, permease component JS608_01783 PF00704 Glycosyl hydrolases family 18 JS608_01783 PF01476 LysM domain JS608_01784 PF11132 Transcriptional regulator protein (SplA) JS608_01785 PF00571 CBS domain JS608_01785 PF01769 Divalent cation transporter JS608_01785 PF03448 MgtE intracellular N domain JS608_01786 PF13411 MerR HTH family regulatory protein JS608_01789 PF01047 MarR family JS608_01791 PF01068 ATP dependent DNA ligase domain JS608_01792 PF02735 Ku70/Ku80 beta-barrel domain JS608_01793 PF09335 SNARE associated Golgi protein JS608_01794 PF03741 Integral membrane protein TerC family JS608_01795 PF04542 Sigma-70 region 2 JS608_01796 PF12791 Anti-sigma factor N-terminus JS608_01797 PF00269 Small, acid-soluble spore proteins, alpha/beta type JS608_01798 PF08876 Domain of unknown function (DUF1836) JS608_01799 PF01435 Peptidase family M48 JS608_01800 PF02386 Cation transport protein JS608_01801 PF04239 Protein of unknown function (DUF421) JS608_01803 PF01757 Acyltransferase family JS608_01804 PF13188 PAS domain JS608_01804 PF13426 PAS domain JS608_01804 PF00512 His Kinase A (phospho-acceptor) domain JS608_01804 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_01804 PF00989 PAS fold JS608_01805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JS608_01805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JS608_01807 PF01008 Initiation factor 2 subunit family JS608_01808 PF01636 Phosphotransferase enzyme family JS608_01809 PF00795 Carbon-nitrogen hydrolase JS608_01810 PF00155 Aminotransferase class I and II JS608_01811 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain JS608_01811 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain JS608_01813 PF00596 Class II Aldolase and Adducin N-terminal domain JS608_01814 PF03079 ARD/ARD' family JS608_01815 PF09388 Spo0E like sporulation regulatory protein JS608_01816 PF00512 His Kinase A (phospho-acceptor) domain JS608_01816 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_01816 PF02743 Cache domain JS608_01817 PF01047 MarR family JS608_01818 PF13677 Membrane MotB of proton-channel complex MotA/MotB JS608_01818 PF00691 OmpA family JS608_01819 PF01618 MotA/TolQ/ExbB proton channel family JS608_01820 PF00004 ATPase family associated with various cellular activities (AAA) JS608_01820 PF07724 AAA domain (Cdc48 subfamily) JS608_01820 PF17871 AAA lid domain JS608_01820 PF10431 C-terminal, D2-small domain, of ClpB protein JS608_01823 PF06508 Queuosine biosynthesis protein QueC JS608_01824 PF01242 6-pyruvoyl tetrahydropterin synthase JS608_01825 PF04055 Radical SAM superfamily JS608_01826 PF14489 QueF-like protein JS608_01827 PF11514 Protein of unknown function (DUF3219) JS608_01828 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) JS608_01830 PF07486 Cell Wall Hydrolase JS608_01831 PF01943 Polysaccharide biosynthesis protein JS608_01832 PF00578 AhpC/TSA family JS608_01834 PF01321 Creatinase/Prolidase N-terminal domain JS608_01834 PF00557 Metallopeptidase family M24 JS608_01836 PF00356 Bacterial regulatory proteins, lacI family JS608_01836 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JS608_01837 PF03123 CAT RNA binding domain JS608_01837 PF00874 PRD domain JS608_01838 PF02378 Phosphotransferase system, EIIC JS608_01838 PF00367 phosphotransferase system, EIIB JS608_01838 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JS608_01839 PF00381 PTS HPr component phosphorylation site JS608_01840 PF00391 PEP-utilising enzyme, mobile domain JS608_01840 PF05524 PEP-utilising enzyme, N-terminal JS608_01840 PF02896 PEP-utilising enzyme, TIM barrel domain JS608_01841 PF11132 Transcriptional regulator protein (SplA) JS608_01843 PF00672 HAMP domain JS608_01843 PF02743 Cache domain JS608_01843 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JS608_01844 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JS608_01844 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JS608_01845 PF00188 Cysteine-rich secretory protein family JS608_01846 PF03717 Penicillin-binding Protein dimerisation domain JS608_01846 PF00905 Penicillin binding protein transpeptidase domain JS608_01847 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_01847 PF00512 His Kinase A (phospho-acceptor) domain JS608_01847 PF00989 PAS fold JS608_01847 PF08447 PAS fold JS608_01848 PF00155 Aminotransferase class I and II JS608_01850 PF01584 CheW-like domain JS608_01850 PF00072 Response regulator receiver domain JS608_01851 PF14177 YkyB-like protein JS608_01852 PF07690 Major Facilitator Superfamily JS608_01853 PF03734 L,D-transpeptidase catalytic domain JS608_01853 PF01476 LysM domain JS608_01854 PF10518 TAT (twin-arginine translocation) pathway signal sequence JS608_01854 PF00149 Calcineurin-like phosphoesterase JS608_01857 PF00563 EAL domain JS608_01857 PF10388 EAL-domain associated signalling protein domain JS608_01858 PF08796 Protein of unknown function (DUF1797) JS608_01859 PF04308 Ribonuclease H-like JS608_01860 PF14156 Antirepressor AbbA JS608_01862 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_01862 PF03466 LysR substrate binding domain JS608_01863 PF00258 Flavodoxin JS608_01865 PF00258 Flavodoxin JS608_01866 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JS608_01866 PF00132 Bacterial transferase hexapeptide (six repeats) JS608_01866 PF14602 Hexapeptide repeat of succinyl-transferase JS608_01867 PF07687 Peptidase dimerisation domain JS608_01867 PF01546 Peptidase family M20/M25/M40 JS608_01868 PF03698 Uncharacterised protein family (UPF0180) JS608_01869 PF00924 Mechanosensitive ion channel JS608_01870 PF00578 AhpC/TSA family JS608_01873 PF12804 MobA-like NTP transferase domain JS608_01874 PF00899 ThiF family JS608_01876 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JS608_01877 PF02391 MoaE protein JS608_01878 PF02597 ThiS family JS608_01879 PF04893 Yip1 domain JS608_01880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JS608_01881 PF00005 ABC transporter JS608_01882 PF02687 FtsX-like permease family JS608_01882 PF12704 MacB-like periplasmic core domain JS608_01883 PF08220 DeoR-like helix-turn-helix domain JS608_01883 PF00455 DeoR C terminal sensor domain JS608_01884 PF00294 pfkB family carbohydrate kinase JS608_01885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JS608_01885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JS608_01886 PF10502 Signal peptidase, peptidase S26 JS608_01888 PF00005 ABC transporter JS608_01888 PF12848 ABC transporter JS608_01889 PF02558 Ketopantoate reductase PanE/ApbA JS608_01889 PF08546 Ketopantoate reductase PanE/ApbA C terminal JS608_01890 PF02073 Thermophilic metalloprotease (M29) JS608_01891 PF17447 Uncharacterized YkpC-like JS608_01893 PF18277 AbrB C-terminal domain JS608_01893 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JS608_01894 PF00989 PAS fold JS608_01894 PF00512 His Kinase A (phospho-acceptor) domain JS608_01894 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_01895 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like JS608_01896 PF02080 TrkA-C domain JS608_01896 PF02254 TrkA-N domain JS608_01897 PF13382 Adenine deaminase C-terminal domain JS608_01897 PF01979 Amidohydrolase family JS608_01898 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JS608_01898 PF00753 Metallo-beta-lactamase superfamily JS608_01898 PF17770 Ribonuclease J C-terminal domain JS608_01899 PF07288 Protein of unknown function (DUF1447) JS608_01901 PF01327 Polypeptide deformylase JS608_01903 PF10368 Putative cell-wall binding lipoprotein JS608_01904 PF00698 Acyl transferase domain JS608_01906 PF16197 Ketoacyl-synthetase C-terminal extension JS608_01906 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_01906 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_01906 PF08659 KR domain JS608_01906 PF00550 Phosphopantetheine attachment site JS608_01906 PF14765 Polyketide synthase dehydratase JS608_01908 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_01908 PF16197 Ketoacyl-synthetase C-terminal extension JS608_01908 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_01908 PF08659 KR domain JS608_01908 PF00550 Phosphopantetheine attachment site JS608_01908 PF14765 Polyketide synthase dehydratase JS608_01909 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_01909 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_01909 PF14765 Polyketide synthase dehydratase JS608_01909 PF00668 Condensation domain JS608_01909 PF08659 KR domain JS608_01909 PF16197 Ketoacyl-synthetase C-terminal extension JS608_01909 PF00550 Phosphopantetheine attachment site JS608_01909 PF00501 AMP-binding enzyme JS608_01909 PF13193 AMP-binding enzyme C-terminal domain JS608_01910 PF16197 Ketoacyl-synthetase C-terminal extension JS608_01910 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_01910 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_01910 PF08659 KR domain JS608_01910 PF00550 Phosphopantetheine attachment site JS608_01910 PF14765 Polyketide synthase dehydratase JS608_01911 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_01911 PF16197 Ketoacyl-synthetase C-terminal extension JS608_01911 PF14765 Polyketide synthase dehydratase JS608_01911 PF00550 Phosphopantetheine attachment site JS608_01911 PF08659 KR domain JS608_01911 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_01912 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_01912 PF08659 KR domain JS608_01912 PF00668 Condensation domain JS608_01912 PF13193 AMP-binding enzyme C-terminal domain JS608_01912 PF00501 AMP-binding enzyme JS608_01912 PF00550 Phosphopantetheine attachment site JS608_01912 PF14765 Polyketide synthase dehydratase JS608_01912 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_01912 PF16197 Ketoacyl-synthetase C-terminal extension JS608_01913 PF00144 Beta-lactamase JS608_01913 PF11954 Domain of unknown function (DUF3471) JS608_01914 PF00676 Dehydrogenase E1 component JS608_01915 PF02779 Transketolase, pyrimidine binding domain JS608_01915 PF02780 Transketolase, C-terminal domain JS608_01916 PF02817 e3 binding domain JS608_01916 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JS608_01916 PF00364 Biotin-requiring enzyme JS608_01920 PF01276 Orn/Lys/Arg decarboxylase, major domain JS608_01920 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JS608_01921 PF05256 Uncharacterised protein family (UPF0223) JS608_01922 PF06335 Protein of unknown function (DUF1054) JS608_01924 PF00459 Inositol monophosphatase family JS608_01925 PF00583 Acetyltransferase (GNAT) family JS608_01926 PF07504 Fungalysin/Thermolysin Propeptide Motif JS608_01926 PF03413 Peptidase propeptide and YPEB domain JS608_01926 PF01447 Thermolysin metallopeptidase, catalytic domain JS608_01926 PF02868 Thermolysin metallopeptidase, alpha-helical domain JS608_01927 PF13490 Putative zinc-finger JS608_01929 PF17259 Family of unknown function (DUF5325) JS608_01930 PF03144 Elongation factor Tu domain 2 JS608_01930 PF00009 Elongation factor Tu GTP binding domain JS608_01930 PF00679 Elongation factor G C-terminus JS608_01930 PF14492 Elongation Factor G, domain II JS608_01931 PF14036 YlaH-like protein JS608_01932 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) JS608_01933 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JS608_01934 PF13638 PIN domain JS608_01934 PF02562 PhoH-like protein JS608_01936 PF04960 Glutaminase JS608_01937 PF07408 Protein of unknown function (DUF1507) JS608_01938 PF01098 Cell cycle protein JS608_01939 PF00682 HMGL-like JS608_01939 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JS608_01939 PF00364 Biotin-requiring enzyme JS608_01939 PF00289 Biotin carboxylase, N-terminal domain JS608_01939 PF02785 Biotin carboxylase C-terminal domain JS608_01939 PF02436 Conserved carboxylase domain JS608_01940 PF02628 Cytochrome oxidase assembly protein JS608_01941 PF01040 UbiA prenyltransferase family JS608_01942 PF00034 Cytochrome c JS608_01942 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JS608_01942 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JS608_01943 PF00115 Cytochrome C and Quinol oxidase polypeptide I JS608_01944 PF00510 Cytochrome c oxidase subunit III JS608_01945 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JS608_01946 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) JS608_01947 PF08868 YugN-like family JS608_01948 PF08868 YugN-like family JS608_01949 PF00571 CBS domain JS608_01950 PF00188 Cysteine-rich secretory protein family JS608_01950 PF14504 CAP-associated N-terminal JS608_01951 PF14071 Putative coat protein JS608_01952 PF14003 YlbE-like protein JS608_01953 PF06133 Control of competence regulator ComK, YlbF/YmcA JS608_01954 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JS608_01957 PF01467 Cytidylyltransferase-like JS608_01958 PF07670 Nucleoside recognition JS608_01959 PF01734 Patatin-like phospholipase JS608_01960 PF05362 Lon protease (S16) C-terminal proteolytic domain JS608_01960 PF13180 PDZ domain JS608_01961 PF05636 HIGH Nucleotidyl Transferase JS608_01962 PF02620 Large ribosomal RNA subunit accumulation protein YceD JS608_01963 PF01783 Ribosomal L32p protein family JS608_01965 PF00583 Acetyltransferase (GNAT) family JS608_01966 PF02558 Ketopantoate reductase PanE/ApbA JS608_01966 PF08546 Ketopantoate reductase PanE/ApbA C terminal JS608_01967 PF10079 Bacillithiol biosynthesis BshC JS608_01968 PF02381 MraZ protein, putative antitoxin-like JS608_01969 PF01795 MraW methylase family JS608_01971 PF00905 Penicillin binding protein transpeptidase domain JS608_01971 PF03793 PASTA domain JS608_01971 PF03717 Penicillin-binding Protein dimerisation domain JS608_01972 PF03793 PASTA domain JS608_01972 PF03717 Penicillin-binding Protein dimerisation domain JS608_01972 PF00905 Penicillin binding protein transpeptidase domain JS608_01973 PF01225 Mur ligase family, catalytic domain JS608_01973 PF02875 Mur ligase family, glutamate ligase domain JS608_01973 PF08245 Mur ligase middle domain JS608_01974 PF00953 Glycosyl transferase family 4 JS608_01974 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JS608_01975 PF02875 Mur ligase family, glutamate ligase domain JS608_01975 PF08245 Mur ligase middle domain JS608_01976 PF01098 Cell cycle protein JS608_01977 PF04101 Glycosyltransferase family 28 C-terminal domain JS608_01977 PF03033 Glycosyltransferase family 28 N-terminal domain JS608_01978 PF01565 FAD binding domain JS608_01978 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JS608_01979 PF08478 POTRA domain, FtsQ-type JS608_01980 PF02491 SHS2 domain inserted in FTSA JS608_01981 PF12327 FtsZ family, C-terminal domain JS608_01981 PF00091 Tubulin/FtsZ family, GTPase domain JS608_01982 PF05922 Peptidase inhibitor I9 JS608_01982 PF00082 Subtilase family JS608_01983 PF03419 Sporulation factor SpoIIGA JS608_01984 PF04542 Sigma-70 region 2 JS608_01984 PF04545 Sigma-70, region 4 JS608_01985 PF04542 Sigma-70 region 2 JS608_01985 PF04539 Sigma-70 region 3 JS608_01985 PF04545 Sigma-70, region 4 JS608_01986 PF00005 ABC transporter JS608_01987 PF07687 Peptidase dimerisation domain JS608_01987 PF01546 Peptidase family M20/M25/M40 JS608_01988 PF05239 PRC-barrel domain JS608_01989 PF02578 Multi-copper polyphenol oxidoreductase laccase JS608_01990 PF01168 Alanine racemase, N-terminal domain JS608_01991 PF04472 Cell division protein SepF JS608_01992 PF02325 YGGT family JS608_01993 PF01479 S4 domain JS608_01993 PF17774 Putative RNA-binding domain in YlmH JS608_01994 PF05103 DivIVA protein JS608_01995 PF08264 Anticodon-binding domain of tRNA JS608_01995 PF00133 tRNA synthetases class I (I, L, M and V) JS608_01996 PF01258 Prokaryotic dksA/traR C4-type zinc finger JS608_01997 PF01252 Signal peptidase (SPase) II JS608_01998 PF00849 RNA pseudouridylate synthase JS608_01998 PF01479 S4 domain JS608_02000 PF00156 Phosphoribosyl transferase domain JS608_02002 PF00860 Permease family JS608_02004 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JS608_02004 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JS608_02005 PF01979 Amidohydrolase family JS608_02006 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JS608_02006 PF00117 Glutamine amidotransferase class-I JS608_02007 PF02142 MGS-like domain JS608_02007 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JS608_02007 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JS608_02008 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JS608_02008 PF00175 Oxidoreductase NAD-binding domain JS608_02010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JS608_02011 PF00156 Phosphoribosyl transferase domain JS608_02013 PF01507 Phosphoadenosine phosphosulfate reductase family JS608_02014 PF01384 Phosphate transporter family JS608_02017 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JS608_02018 PF01903 CbiX JS608_02020 PF05670 NFACT protein RNA binding domain JS608_02021 PF00690 Cation transporter/ATPase, N-terminus JS608_02021 PF00689 Cation transporting ATPase, C-terminus JS608_02022 PF08340 Domain of unknown function (DUF1732) JS608_02022 PF03755 YicC-like family, N-terminal region JS608_02023 PF04025 Domain of unknown function (DUF370) JS608_02024 PF00625 Guanylate kinase JS608_02025 PF01192 RNA polymerase Rpb6 JS608_02026 PF04127 DNA / pantothenate metabolism flavoprotein JS608_02026 PF02441 Flavoprotein JS608_02027 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JS608_02027 PF04851 Type III restriction enzyme, res subunit JS608_02027 PF17764 3′ DNA-binding domain (3′BD) JS608_02027 PF00271 Helicase conserved C-terminal domain JS608_02027 PF18074 Primosomal protein N C-terminal domain JS608_02028 PF01327 Polypeptide deformylase JS608_02030 PF01029 NusB family JS608_02030 PF01189 16S rRNA methyltransferase RsmB/F JS608_02031 PF04055 Radical SAM superfamily JS608_02033 PF03793 PASTA domain JS608_02033 PF00069 Protein kinase domain JS608_02034 PF03193 RsgA GTPase JS608_02034 PF16745 RsgA N-terminal domain JS608_02035 PF00834 Ribulose-phosphate 3 epimerase family JS608_02036 PF04263 Thiamin pyrophosphokinase, catalytic domain JS608_02036 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JS608_02037 PF00830 Ribosomal L28 family JS608_02038 PF03780 Asp23 family, cell envelope-related function JS608_02039 PF13684 Dihydroxyacetone kinase family JS608_02039 PF02734 DAK2 domain JS608_02040 PF01842 ACT domain JS608_02040 PF03315 Serine dehydratase beta chain JS608_02041 PF03313 Serine dehydratase alpha chain JS608_02042 PF17191 RecG wedge domain JS608_02042 PF00271 Helicase conserved C-terminal domain JS608_02042 PF00270 DEAD/DEAH box helicase JS608_02043 PF03061 Thioesterase superfamily JS608_02044 PF02504 Fatty acid synthesis protein JS608_02045 PF00698 Acyl transferase domain JS608_02047 PF00550 Phosphopantetheine attachment site JS608_02048 PF00035 Double-stranded RNA binding motif JS608_02048 PF14622 Ribonuclease-III-like JS608_02049 PF02463 RecF/RecN/SMC N terminal domain JS608_02049 PF06470 SMC proteins Flexible Hinge Domain JS608_02050 PF00448 SRP54-type protein, GTPase domain JS608_02050 PF02881 SRP54-type protein, helical bundle domain JS608_02052 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JS608_02053 PF00448 SRP54-type protein, GTPase domain JS608_02053 PF02881 SRP54-type protein, helical bundle domain JS608_02053 PF02978 Signal peptide binding domain JS608_02054 PF00886 Ribosomal protein S16 JS608_02056 PF11068 YlqD protein JS608_02057 PF01782 RimM N-terminal domain JS608_02057 PF05239 PRC-barrel domain JS608_02058 PF01746 tRNA (Guanine-1)-methyltransferase JS608_02059 PF01245 Ribosomal protein L19 JS608_02060 PF01926 50S ribosome-binding GTPase JS608_02061 PF01351 Ribonuclease HII JS608_02063 PF01312 FlhB HrpN YscU SpaS Family JS608_02064 PF00549 CoA-ligase JS608_02064 PF08442 ATP-grasp domain JS608_02065 PF00549 CoA-ligase JS608_02065 PF02629 CoA binding domain JS608_02066 PF02481 DNA recombination-mediator protein A JS608_02067 PF01396 Topoisomerase DNA binding C4 zinc finger JS608_02067 PF01751 Toprim domain JS608_02067 PF01131 DNA topoisomerase JS608_02068 PF01134 Glucose inhibited division protein A JS608_02069 PF02899 Phage integrase, N-terminal SAM-like domain JS608_02069 PF00589 Phage integrase family JS608_02070 PF00227 Proteasome subunit JS608_02071 PF00004 ATPase family associated with various cellular activities (AAA) JS608_02071 PF07724 AAA domain (Cdc48 subfamily) JS608_02071 PF10431 C-terminal, D2-small domain, of ClpB protein JS608_02072 PF06018 CodY GAF-like domain JS608_02072 PF08222 CodY helix-turn-helix domain JS608_02073 PF00460 Flagella basal body rod protein JS608_02074 PF00460 Flagella basal body rod protein JS608_02074 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JS608_02075 PF02049 Flagellar hook-basal body complex protein FliE JS608_02076 PF01514 Secretory protein of YscJ/FliF family JS608_02076 PF08345 Flagellar M-ring protein C-terminal JS608_02077 PF01706 FliG C-terminal domain JS608_02077 PF14841 FliG middle domain JS608_02077 PF14842 FliG N-terminal domain JS608_02078 PF02108 Flagellar assembly protein FliH JS608_02079 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JS608_02079 PF18269 T3SS EscN ATPase C-terminal domain JS608_02079 PF02874 ATP synthase alpha/beta family, beta-barrel domain JS608_02080 PF02050 Flagellar FliJ protein JS608_02081 PF03448 MgtE intracellular N domain JS608_02082 PF02120 Flagellar hook-length control protein FliK JS608_02083 PF03963 Flagellar hook capping protein - N-terminal region JS608_02084 PF00460 Flagella basal body rod protein JS608_02084 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JS608_02085 PF03748 Flagellar basal body-associated protein FliL JS608_02086 PF02154 Flagellar motor switch protein FliM JS608_02086 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JS608_02087 PF04509 CheC-like family JS608_02087 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JS608_02088 PF00072 Response regulator receiver domain JS608_02089 PF04347 Flagellar biosynthesis protein, FliO JS608_02090 PF00813 FliP family JS608_02091 PF01313 Bacterial export proteins, family 3 JS608_02092 PF01311 Bacterial export proteins, family 1 JS608_02093 PF01312 FlhB HrpN YscU SpaS Family JS608_02094 PF00771 FHIPEP family JS608_02095 PF00448 SRP54-type protein, GTPase domain JS608_02096 PF10609 NUBPL iron-transfer P-loop NTPase JS608_02097 PF01339 CheB methylesterase JS608_02097 PF00072 Response regulator receiver domain JS608_02098 PF01584 CheW-like domain JS608_02098 PF02895 Signal transducing histidine kinase, homodimeric domain JS608_02098 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_02098 PF01627 Hpt domain JS608_02098 PF07194 P2 response regulator binding domain JS608_02099 PF01584 CheW-like domain JS608_02100 PF04509 CheC-like family JS608_02101 PF03975 CheD chemotactic sensory transduction JS608_02102 PF04545 Sigma-70, region 4 JS608_02102 PF04539 Sigma-70 region 3 JS608_02102 PF04542 Sigma-70 region 2 JS608_02104 PF00318 Ribosomal protein S2 JS608_02105 PF00889 Elongation factor TS JS608_02106 PF00696 Amino acid kinase family JS608_02107 PF01765 Ribosome recycling factor JS608_02108 PF01255 Putative undecaprenyl diphosphate synthase JS608_02110 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JS608_02110 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JS608_02110 PF13288 DXP reductoisomerase C-terminal domain JS608_02111 PF17820 PDZ domain JS608_02111 PF02163 Peptidase family M50 JS608_02112 PF03129 Anticodon binding domain JS608_02112 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JS608_02112 PF04073 Aminoacyl-tRNA editing domain JS608_02114 PF02576 RimP N-terminal domain JS608_02114 PF17384 RimP C-terminal SH3 domain JS608_02115 PF13184 NusA-like KH domain JS608_02115 PF08529 NusA N-terminal domain JS608_02115 PF00575 S1 RNA binding domain JS608_02116 PF04296 Protein of unknown function (DUF448) JS608_02117 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JS608_02118 PF11987 Translation-initiation factor 2 JS608_02118 PF04760 Translation initiation factor IF-2, N-terminal region JS608_02118 PF00009 Elongation factor Tu GTP binding domain JS608_02119 PF04456 Protein of unknown function (DUF503) JS608_02120 PF02033 Ribosome-binding factor A JS608_02121 PF16198 tRNA pseudouridylate synthase B C-terminal domain JS608_02121 PF01509 TruB family pseudouridylate synthase (N terminal domain) JS608_02122 PF01687 Riboflavin kinase JS608_02122 PF06574 FAD synthetase JS608_02123 PF00312 Ribosomal protein S15 JS608_02124 PF01138 3' exoribonuclease family, domain 1 JS608_02124 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JS608_02124 PF03725 3' exoribonuclease family, domain 2 JS608_02124 PF00575 S1 RNA binding domain JS608_02124 PF00013 KH domain JS608_02125 PF01522 Polysaccharide deacetylase JS608_02126 PF05193 Peptidase M16 inactive domain JS608_02126 PF00675 Insulinase (Peptidase family M16) JS608_02127 PF05239 PRC-barrel domain JS608_02128 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JS608_02128 PF16924 Dipicolinate synthase subunit A N-terminal domain JS608_02129 PF02441 Flavoprotein JS608_02130 PF01118 Semialdehyde dehydrogenase, NAD binding domain JS608_02130 PF02774 Semialdehyde dehydrogenase, dimerisation domain JS608_02131 PF00696 Amino acid kinase family JS608_02131 PF13840 ACT domain JS608_02132 PF00701 Dihydrodipicolinate synthetase family JS608_02133 PF00753 Metallo-beta-lactamase superfamily JS608_02133 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JS608_02133 PF17770 Ribonuclease J C-terminal domain JS608_02134 PF00574 Clp protease JS608_02135 PF14035 YlzJ-like protein JS608_02136 PF17854 FtsK alpha domain JS608_02136 PF09397 Ftsk gamma domain JS608_02136 PF01580 FtsK/SpoIIIE family JS608_02137 PF00392 Bacterial regulatory proteins, gntR family JS608_02137 PF07702 UTRA domain JS608_02138 PF07690 Major Facilitator Superfamily JS608_02139 PF01047 MarR family JS608_02140 PF03176 MMPL family JS608_02141 PF05193 Peptidase M16 inactive domain JS608_02142 PF00675 Insulinase (Peptidase family M16) JS608_02142 PF05193 Peptidase M16 inactive domain JS608_02144 PF11588 Protein of unknown function (DUF3243) JS608_02145 PF11868 Protein of unknown function (DUF3388) JS608_02146 PF13464 Domain of unknown function (DUF4115) JS608_02147 PF01066 CDP-alcohol phosphatidyltransferase JS608_02148 PF18146 Damage-inducible protein CinA KH domain JS608_02148 PF00994 Probable molybdopterin binding domain JS608_02148 PF02464 Competence-damaged protein JS608_02149 PF00154 recA bacterial DNA recombination protein JS608_02150 PF00144 Beta-lactamase JS608_02151 PF01966 HD domain JS608_02151 PF00013 KH domain JS608_02151 PF12072 Domain of unknown function (DUF3552) JS608_02152 PF13277 YmdB-like protein JS608_02153 PF04232 Stage V sporulation protein S (SpoVS) JS608_02154 PF00107 Zinc-binding dehydrogenase JS608_02154 PF08240 Alcohol dehydrogenase GroES-like domain JS608_02155 PF00155 Aminotransferase class I and II JS608_02156 PF04055 Radical SAM superfamily JS608_02156 PF01938 TRAM domain JS608_02156 PF00919 Uncharacterized protein family UPF0004 JS608_02157 PF06133 Control of competence regulator ComK, YlbF/YmcA JS608_02158 PF10628 Outer spore coat protein E (CotE) JS608_02159 PF00488 MutS domain V JS608_02159 PF01624 MutS domain I JS608_02159 PF05188 MutS domain II JS608_02159 PF05192 MutS domain III JS608_02159 PF05190 MutS family domain IV JS608_02160 PF08676 MutL C terminal dimerisation domain JS608_02160 PF01119 DNA mismatch repair protein, C-terminal domain JS608_02162 PF00753 Metallo-beta-lactamase superfamily JS608_02163 PF00698 Acyl transferase domain JS608_02164 PF00698 Acyl transferase domain JS608_02165 PF00698 Acyl transferase domain JS608_02166 PF00550 Phosphopantetheine attachment site JS608_02167 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal JS608_02167 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal JS608_02168 PF00378 Enoyl-CoA hydratase/isomerase JS608_02169 PF00378 Enoyl-CoA hydratase/isomerase JS608_02170 PF08659 KR domain JS608_02170 PF00668 Condensation domain JS608_02170 PF16197 Ketoacyl-synthetase C-terminal extension JS608_02170 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_02170 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_02170 PF00550 Phosphopantetheine attachment site JS608_02170 PF14765 Polyketide synthase dehydratase JS608_02170 PF13193 AMP-binding enzyme C-terminal domain JS608_02170 PF00501 AMP-binding enzyme JS608_02172 PF08659 KR domain JS608_02172 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_02172 PF00550 Phosphopantetheine attachment site JS608_02172 PF16197 Ketoacyl-synthetase C-terminal extension JS608_02172 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_02172 PF14765 Polyketide synthase dehydratase JS608_02172 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_02172 PF08659 KR domain JS608_02172 PF08242 Methyltransferase domain JS608_02172 PF00550 Phosphopantetheine attachment site JS608_02172 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_02172 PF08242 Methyltransferase domain JS608_02172 PF14765 Polyketide synthase dehydratase JS608_02172 PF16197 Ketoacyl-synthetase C-terminal extension JS608_02173 PF13193 AMP-binding enzyme C-terminal domain JS608_02173 PF00501 AMP-binding enzyme JS608_02173 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_02173 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_02173 PF08659 KR domain JS608_02173 PF00550 Phosphopantetheine attachment site JS608_02173 PF14765 Polyketide synthase dehydratase JS608_02173 PF00668 Condensation domain JS608_02173 PF16197 Ketoacyl-synthetase C-terminal extension JS608_02175 PF00067 Cytochrome P450 JS608_02176 PF14040 Deoxyribonuclease NucA/NucB JS608_02177 PF06912 Protein of unknown function (DUF1275) JS608_02179 PF00082 Subtilase family JS608_02180 PF05908 Poly-gamma-glutamate hydrolase JS608_02181 PF02566 OsmC-like protein JS608_02182 PF00893 Small Multidrug Resistance protein JS608_02183 PF00893 Small Multidrug Resistance protein JS608_02185 PF12788 YmaF family JS608_02187 PF17209 Hfq protein JS608_02188 PF14157 YmzC-like protein JS608_02190 PF07972 NrdI Flavodoxin like JS608_02191 PF00317 Ribonucleotide reductase, all-alpha domain JS608_02191 PF08343 Ribonucleotide reductase N-terminal JS608_02191 PF02867 Ribonucleotide reductase, barrel domain JS608_02192 PF00268 Ribonucleotide reductase, small chain JS608_02194 PF05036 Sporulation related domain JS608_02194 PF01520 N-acetylmuramoyl-L-alanine amidase JS608_02195 PF17866 AAA lid domain JS608_02195 PF00004 ATPase family associated with various cellular activities (AAA) JS608_02196 PF16360 GTP-binding GTPase Middle Region JS608_02196 PF13167 GTP-binding GTPase N-terminal JS608_02196 PF01926 50S ribosome-binding GTPase JS608_02197 PF06838 Methionine gamma-lyase JS608_02198 PF13411 MerR HTH family regulatory protein JS608_02199 PF00120 Glutamine synthetase, catalytic domain JS608_02199 PF03951 Glutamine synthetase, beta-Grasp domain JS608_02202 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JS608_02202 PF04616 Glycosyl hydrolases family 43 JS608_02203 PF00480 ROK family JS608_02204 PF01261 Xylose isomerase-like TIM barrel JS608_02205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JS608_02205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JS608_02206 PF00391 PEP-utilising enzyme, mobile domain JS608_02206 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JS608_02207 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JS608_02207 PF00391 PEP-utilising enzyme, mobile domain JS608_02211 PF08240 Alcohol dehydrogenase GroES-like domain JS608_02211 PF00107 Zinc-binding dehydrogenase JS608_02214 PF00583 Acetyltransferase (GNAT) family JS608_02214 PF14268 YoaP-like JS608_02216 PF13021 Domain of unknown function (DUF3885) JS608_02218 PF18416 N-acetylglucosamine binding protein domain 2 JS608_02218 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JS608_02219 PF09680 Family of unknown function JS608_02223 PF12708 Pectate lyase superfamily protein JS608_02223 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain JS608_02224 PF00692 dUTPase JS608_02225 PF05908 Poly-gamma-glutamate hydrolase JS608_02228 PF10710 Protein of unknown function (DUF2512) JS608_02230 PF01726 LexA DNA binding domain JS608_02230 PF00717 Peptidase S24-like JS608_02231 PF01476 LysM domain JS608_02232 PF00239 Resolvase, N terminal domain JS608_02233 PF05979 Bacterial protein of unknown function (DUF896) JS608_02234 PF02780 Transketolase, C-terminal domain JS608_02234 PF02779 Transketolase, pyrimidine binding domain JS608_02234 PF00456 Transketolase, thiamine diphosphate binding domain JS608_02235 PF10747 Sporulation inhibitor of replication protein SirA JS608_02236 PF03672 Uncharacterised protein family (UPF0154) JS608_02237 PF09388 Spo0E like sporulation regulatory protein JS608_02238 PF02683 Cytochrome C biogenesis protein transmembrane region JS608_02239 PF00072 Response regulator receiver domain JS608_02240 PF07301 Protein of unknown function (DUF1453) JS608_02241 PF11084 Protein of unknown function (DUF2621) JS608_02243 PF08179 Small acid-soluble spore protein P family JS608_02245 PF00330 Aconitase family (aconitate hydratase) JS608_02245 PF00694 Aconitase C-terminal domain JS608_02246 PF00578 AhpC/TSA family JS608_02247 PF08177 Small acid-soluble spore protein N family JS608_02249 PF03061 Thioesterase superfamily JS608_02251 PF01521 Iron-sulphur cluster biosynthesis JS608_02252 PF02660 Glycerol-3-phosphate acyltransferase JS608_02253 PF13380 CoA binding domain JS608_02254 PF00204 DNA gyrase B JS608_02254 PF00986 DNA gyrase B subunit, carboxyl terminus JS608_02254 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_02254 PF01751 Toprim domain JS608_02255 PF03989 DNA gyrase C-terminal domain, beta-propeller JS608_02255 PF00521 DNA gyrase/topoisomerase IV, subunit A JS608_02258 PF01235 Sodium:alanine symporter family JS608_02259 PF00294 pfkB family carbohydrate kinase JS608_02260 PF08240 Alcohol dehydrogenase GroES-like domain JS608_02260 PF00107 Zinc-binding dehydrogenase JS608_02261 PF01081 KDPG and KHG aldolase JS608_02262 PF03786 D-mannonate dehydratase (UxuA) JS608_02263 PF00106 short chain dehydrogenase JS608_02264 PF00356 Bacterial regulatory proteins, lacI family JS608_02265 PF07690 Major Facilitator Superfamily JS608_02267 PF13761 Domain of unknown function (DUF4166) JS608_02268 PF14158 YndJ-like protein JS608_02270 PF00150 Cellulase (glycosyl hydrolase family 5) JS608_02270 PF00942 Cellulose binding domain JS608_02272 PF00512 His Kinase A (phospho-acceptor) domain JS608_02272 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_02273 PF00072 Response regulator receiver domain JS608_02273 PF00486 Transcriptional regulatory protein, C terminal JS608_02274 PF17189 Glycosyl hydrolase family 30 beta sandwich domain JS608_02274 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain JS608_02275 PF03422 Carbohydrate binding module (family 6) JS608_02275 PF04616 Glycosyl hydrolases family 43 JS608_02276 PF13193 AMP-binding enzyme C-terminal domain JS608_02276 PF00668 Condensation domain JS608_02276 PF00550 Phosphopantetheine attachment site JS608_02276 PF00975 Thioesterase domain JS608_02276 PF00501 AMP-binding enzyme JS608_02278 PF00202 Aminotransferase class-III JS608_02278 PF00501 AMP-binding enzyme JS608_02278 PF13193 AMP-binding enzyme C-terminal domain JS608_02278 PF00668 Condensation domain JS608_02278 PF16197 Ketoacyl-synthetase C-terminal extension JS608_02278 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_02278 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_02278 PF00550 Phosphopantetheine attachment site JS608_02279 PF00698 Acyl transferase domain JS608_02281 PF01144 Coenzyme A transferase JS608_02282 PF01144 Coenzyme A transferase JS608_02284 PF00067 Cytochrome P450 JS608_02285 PF04055 Radical SAM superfamily JS608_02285 PF06968 Biotin and Thiamin Synthesis associated domain JS608_02287 PF00155 Aminotransferase class I and II JS608_02288 PF00202 Aminotransferase class-III JS608_02289 PF03744 6-carboxyhexanoate--CoA ligase JS608_02290 PF04138 GtrA-like protein JS608_02291 PF00483 Nucleotidyl transferase JS608_02292 PF09335 SNARE associated Golgi protein JS608_02293 PF01039 Carboxyl transferase domain JS608_02294 PF00378 Enoyl-CoA hydratase/isomerase JS608_02295 PF00682 HMGL-like JS608_02296 PF00364 Biotin-requiring enzyme JS608_02297 PF02785 Biotin carboxylase C-terminal domain JS608_02297 PF00289 Biotin carboxylase, N-terminal domain JS608_02297 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JS608_02298 PF00501 AMP-binding enzyme JS608_02298 PF13193 AMP-binding enzyme C-terminal domain JS608_02299 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JS608_02299 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JS608_02299 PF02770 Acyl-CoA dehydrogenase, middle domain JS608_02300 PF02638 Glycosyl hydrolase-like 10 JS608_02301 PF07098 Protein of unknown function (DUF1360) JS608_02302 PF00501 AMP-binding enzyme JS608_02302 PF13193 AMP-binding enzyme C-terminal domain JS608_02302 PF00668 Condensation domain JS608_02302 PF00550 Phosphopantetheine attachment site JS608_02302 PF00975 Thioesterase domain JS608_02303 PF00550 Phosphopantetheine attachment site JS608_02303 PF00668 Condensation domain JS608_02303 PF00501 AMP-binding enzyme JS608_02303 PF13193 AMP-binding enzyme C-terminal domain JS608_02304 PF00501 AMP-binding enzyme JS608_02304 PF13193 AMP-binding enzyme C-terminal domain JS608_02304 PF00668 Condensation domain JS608_02304 PF00550 Phosphopantetheine attachment site JS608_02305 PF00501 AMP-binding enzyme JS608_02305 PF13193 AMP-binding enzyme C-terminal domain JS608_02305 PF00668 Condensation domain JS608_02305 PF00550 Phosphopantetheine attachment site JS608_02307 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JS608_02308 PF01263 Aldose 1-epimerase JS608_02309 PF01554 MatE JS608_02310 PF16800 IseA DL-endopeptidase inhibitor JS608_02312 PF00589 Phage integrase family JS608_02313 PF12728 Helix-turn-helix domain JS608_02317 PF03129 Anticodon binding domain JS608_02317 PF02824 TGS domain JS608_02317 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JS608_02317 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JS608_02318 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_02318 PF03466 LysR substrate binding domain JS608_02319 PF08240 Alcohol dehydrogenase GroES-like domain JS608_02319 PF00107 Zinc-binding dehydrogenase JS608_02320 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JS608_02320 PF07992 Pyridine nucleotide-disulphide oxidoreductase JS608_02321 PF00310 Glutamine amidotransferases class-II JS608_02321 PF04898 Glutamate synthase central domain JS608_02321 PF01645 Conserved region in glutamate synthase JS608_02321 PF01493 GXGXG motif JS608_02322 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_02322 PF03466 LysR substrate binding domain JS608_02323 PF00696 Amino acid kinase family JS608_02323 PF01472 PUA domain JS608_02324 PF03807 NADP oxidoreductase coenzyme F420-dependent JS608_02324 PF14748 Pyrroline-5-carboxylate reductase dimerisation JS608_02325 PF02334 Replication terminator protein JS608_02326 PF00106 short chain dehydrogenase JS608_02327 PF06103 Bacterial protein of unknown function (DUF948) JS608_02330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JS608_02330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JS608_02331 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JS608_02331 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JS608_02332 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JS608_02332 PF00384 Molybdopterin oxidoreductase JS608_02332 PF01568 Molydopterin dinucleotide binding domain JS608_02337 PF01638 HxlR-like helix-turn-helix JS608_02338 PF01588 Putative tRNA binding domain JS608_02339 PF07883 Cupin domain JS608_02339 PF12833 Helix-turn-helix domain JS608_02340 PF13305 Tetracyclin repressor-like, C-terminal domain JS608_02340 PF00440 Bacterial regulatory proteins, tetR family JS608_02341 PF00753 Metallo-beta-lactamase superfamily JS608_02343 PF01022 Bacterial regulatory protein, arsR family JS608_02345 PF04238 Protein of unknown function (DUF420) JS608_02346 PF18846 Bacterial archaeo-eukaryotic release factor family 5 JS608_02348 PF02016 LD-carboxypeptidase N-terminal domain JS608_02348 PF17676 LD-carboxypeptidase C-terminal domain JS608_02350 PF06725 3D domain JS608_02350 PF01476 LysM domain JS608_02351 PF16124 RecQ zinc-binding JS608_02351 PF00270 DEAD/DEAH box helicase JS608_02351 PF00271 Helicase conserved C-terminal domain JS608_02351 PF00570 HRDC domain JS608_02351 PF09382 RQC domain JS608_02353 PF02525 Flavodoxin-like fold JS608_02355 PF01258 Prokaryotic dksA/traR C4-type zinc finger JS608_02358 PF00011 Hsp20/alpha crystallin family JS608_02361 PF08000 Bacterial PH domain JS608_02364 PF00171 Aldehyde dehydrogenase family JS608_02365 PF13243 Squalene-hopene cyclase C-terminal domain JS608_02365 PF13249 Squalene-hopene cyclase N-terminal domain JS608_02366 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JS608_02366 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JS608_02367 PF00209 Sodium:neurotransmitter symporter family JS608_02368 PF01758 Sodium Bile acid symporter family JS608_02369 PF00753 Metallo-beta-lactamase superfamily JS608_02370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JS608_02370 PF00364 Biotin-requiring enzyme JS608_02370 PF02817 e3 binding domain JS608_02371 PF16870 2-oxoglutarate dehydrogenase C-terminal JS608_02371 PF02779 Transketolase, pyrimidine binding domain JS608_02371 PF00676 Dehydrogenase E1 component JS608_02372 PF00092 von Willebrand factor type A domain JS608_02373 PF07728 AAA domain (dynein-related subfamily) JS608_02374 PF13627 Prokaryotic lipoprotein-attachment site JS608_02374 PF00080 Copper/zinc superoxide dismutase (SODC) JS608_02375 PF01476 LysM domain JS608_02375 PF00877 NlpC/P60 family JS608_02376 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JS608_02377 PF02457 DisA bacterial checkpoint controller nucleotide-binding JS608_02377 PF10372 Bacterial membrane-spanning protein N-terminus JS608_02379 PF01554 MatE JS608_02380 PF01740 STAS domain JS608_02381 PF02585 GlcNAc-PI de-N-acetylase JS608_02382 PF08830 Protein of unknown function (DUF1806) JS608_02384 PF00892 EamA-like transporter family JS608_02387 PF14552 Tautomerase enzyme JS608_02389 PF01638 HxlR-like helix-turn-helix JS608_02390 PF00881 Nitroreductase family JS608_02391 PF01738 Dienelactone hydrolase family JS608_02392 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JS608_02393 PF11755 Protein of unknown function (DUF3311) JS608_02394 PF00474 Sodium:solute symporter family JS608_02396 PF00232 Glycosyl hydrolase family 1 JS608_02397 PF07702 UTRA domain JS608_02397 PF00392 Bacterial regulatory proteins, gntR family JS608_02398 PF03572 Peptidase family S41 JS608_02398 PF01471 Putative peptidoglycan binding domain JS608_02398 PF17820 PDZ domain JS608_02399 PF08241 Methyltransferase domain JS608_02401 PF02557 D-alanyl-D-alanine carboxypeptidase JS608_02402 PF01048 Phosphorylase superfamily JS608_02404 PF14191 YodL-like JS608_02405 PF01569 PAP2 superfamily JS608_02406 PF14162 YozD-like protein JS608_02410 PF06855 YozE SAM-like fold JS608_02411 PF14122 YokU-like protein, putative antitoxin JS608_02412 PF12544 Lysine-2,3-aminomutase JS608_02413 PF00583 Acetyltransferase (GNAT) family JS608_02414 PF07687 Peptidase dimerisation domain JS608_02414 PF01546 Peptidase family M20/M25/M40 JS608_02415 PF01144 Coenzyme A transferase JS608_02416 PF01144 Coenzyme A transferase JS608_02417 PF00202 Aminotransferase class-III JS608_02418 PF06445 GyrI-like small molecule binding domain JS608_02420 PF00583 Acetyltransferase (GNAT) family JS608_02421 PF00535 Glycosyl transferase family 2 JS608_02424 PF12996 DUF based on E. rectale Gene description (DUF3880) JS608_02425 PF02333 Phytase JS608_02426 PF02719 Polysaccharide biosynthesis protein JS608_02426 PF08485 Polysaccharide biosynthesis protein C-terminal JS608_02428 PF11518 Protein of unknown function (DUF3221) JS608_02433 PF01068 ATP dependent DNA ligase domain JS608_02436 PF14037 YoqO-like protein JS608_02438 PF18801 response regulator aspartate phosphatase H, N terminal JS608_02443 PF16219 Domain of unknown function (DUF4879) JS608_02448 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH JS608_02448 PF04740 LXG domain of WXG superfamily JS608_02451 PF00239 Resolvase, N terminal domain JS608_02451 PF07508 Recombinase JS608_02452 PF02719 Polysaccharide biosynthesis protein JS608_02453 PF01641 SelR domain JS608_02454 PF01625 Peptide methionine sulfoxide reductase JS608_02455 PF01047 MarR family JS608_02456 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) JS608_02457 PF13472 GDSL-like Lipase/Acylhydrolase family JS608_02458 PF02630 SCO1/SenC JS608_02459 PF10751 Protein of unknown function (DUF2535) JS608_02460 PF00585 C-terminal regulatory domain of Threonine dehydratase JS608_02460 PF00291 Pyridoxal-phosphate dependent enzyme JS608_02461 PF08461 Ribonuclease R winged-helix domain JS608_02461 PF00158 Sigma-54 interaction domain JS608_02462 PF03006 Haemolysin-III related JS608_02464 PF00186 Dihydrofolate reductase JS608_02465 PF00303 Thymidylate synthase JS608_02466 PF14005 YpjP-like protein JS608_02467 PF04445 Putative SAM-dependent methyltransferase JS608_02468 PF06491 Disulphide isomerase JS608_02469 PF00920 Dehydratase family JS608_02470 PF00920 Dehydratase family JS608_02471 PF08712 Scaffold protein Nfu/NifU N terminal JS608_02471 PF13769 Virulence factor JS608_02472 PF01966 HD domain JS608_02473 PF00255 Glutathione peroxidase JS608_02474 PF04204 Homoserine O-succinyltransferase JS608_02475 PF00534 Glycosyl transferases group 1 JS608_02475 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JS608_02476 PF00313 'Cold-shock' DNA-binding domain JS608_02478 PF10819 Protein of unknown function (DUF2564) JS608_02479 PF10782 Zinc-finger JS608_02480 PF13456 Reverse transcriptase-like JS608_02481 PF02592 Putative vitamin uptake transporter JS608_02482 PF13456 Reverse transcriptase-like JS608_02484 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JS608_02484 PF01367 5'-3' exonuclease, C-terminal SAM fold JS608_02486 PF10752 Protein of unknown function (DUF2533) JS608_02487 PF00350 Dynamin family JS608_02488 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family JS608_02489 PF00195 Chalcone and stilbene synthases, N-terminal domain JS608_02489 PF02797 Chalcone and stilbene synthases, C-terminal domain JS608_02494 PF00857 Isochorismatase family JS608_02496 PF00860 Permease family JS608_02506 PF00149 Calcineurin-like phosphoesterase JS608_02507 PF00269 Small, acid-soluble spore proteins, alpha/beta type JS608_02513 PF00186 Dihydrofolate reductase JS608_02514 PF00303 Thymidylate synthase JS608_02520 PF00085 Thioredoxin JS608_02521 PF00268 Ribonucleotide reductase, small chain JS608_02523 PF14528 LAGLIDADG-like domain JS608_02523 PF02867 Ribonucleotide reductase, barrel domain JS608_02523 PF00317 Ribonucleotide reductase, all-alpha domain JS608_02523 PF08343 Ribonucleotide reductase N-terminal JS608_02524 PF07972 NrdI Flavodoxin like JS608_02550 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) JS608_02551 PF02223 Thymidylate kinase JS608_02553 PF09629 YorP protein JS608_02554 PF06725 3D domain JS608_02565 PF13229 Right handed beta helix region JS608_02566 PF05908 Poly-gamma-glutamate hydrolase JS608_02574 PF02586 SOS response associated peptidase (SRAP) JS608_02575 PF01068 ATP dependent DNA ligase domain JS608_02580 PF00692 dUTPase JS608_02584 PF14037 YoqO-like protein JS608_02588 PF06908 YspA SLOG family JS608_02595 PF09643 YopX protein JS608_02600 PF13443 Cro/C1-type HTH DNA-binding domain JS608_02602 PF14072 DNA-sulfur modification-associated JS608_02620 PF13443 Cro/C1-type HTH DNA-binding domain JS608_02622 PF01757 Acyltransferase family JS608_02638 PF00216 Bacterial DNA-binding protein JS608_02645 PF14528 LAGLIDADG-like domain JS608_02645 PF00521 DNA gyrase/topoisomerase IV, subunit A JS608_02666 PF05709 Phage tail protein JS608_02667 PF06605 Prophage endopeptidase tail JS608_02669 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain JS608_02669 PF12708 Pectate lyase superfamily protein JS608_02670 PF01510 N-acetylmuramoyl-L-alanine amidase JS608_02670 PF01471 Putative peptidoglycan binding domain JS608_02675 PF18801 response regulator aspartate phosphatase H, N terminal JS608_02677 PF00817 impB/mucB/samB family JS608_02677 PF11799 impB/mucB/samB family C-terminal domain JS608_02677 PF11798 IMS family HHH motif JS608_02678 PF08863 YolD-like protein JS608_02679 PF09560 Sporulation protein YunB (Spo_YunB) JS608_02682 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH JS608_02682 PF04740 LXG domain of WXG superfamily JS608_02685 PF05901 Excalibur calcium-binding domain JS608_02685 PF00565 Staphylococcal nuclease homologue JS608_02687 PF00860 Permease family JS608_02688 PF00156 Phosphoribosyl transferase domain JS608_02689 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JS608_02690 PF13307 Helicase C-terminal domain JS608_02692 PF14139 YpzG-like protein JS608_02693 PF02926 THUMP domain JS608_02693 PF01170 Putative RNA methylase family UPF0020 JS608_02694 PF05103 DivIVA protein JS608_02695 PF06908 YspA SLOG family JS608_02696 PF11122 Inner spore coat protein D JS608_02698 PF13482 RNase_H superfamily JS608_02699 PF00270 DEAD/DEAH box helicase JS608_02699 PF09369 Domain of unknown function (DUF1998) JS608_02699 PF00271 Helicase conserved C-terminal domain JS608_02700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JS608_02702 PF14179 YppG-like protein JS608_02703 PF14178 YppF-like protein JS608_02704 PF08807 Bacterial domain of unknown function (DUF1798) JS608_02705 PF17522 Family of unknown function (DUF5446) JS608_02707 PF10720 Protein of unknown function (DUF2515) JS608_02708 PF03838 Recombination protein U JS608_02709 PF00912 Transglycosylase JS608_02709 PF00905 Penicillin binding protein transpeptidase domain JS608_02711 PF10576 Iron-sulfur binding domain of endonuclease III JS608_02711 PF00633 Helix-hairpin-helix motif JS608_02711 PF00730 HhH-GPD superfamily base excision DNA repair protein JS608_02712 PF07261 Replication initiation and membrane attachment JS608_02713 PF01336 OB-fold nucleic acid binding domain JS608_02713 PF00152 tRNA synthetases class II (D, K and N) JS608_02714 PF00155 Aminotransferase class I and II JS608_02715 PF03413 Peptidase propeptide and YPEB domain JS608_02715 PF17881 Domain of unknown function (DUF5590) JS608_02716 PF14084 Protein of unknown function (DUF4264) JS608_02717 PF13307 Helicase C-terminal domain JS608_02717 PF04851 Type III restriction enzyme, res subunit JS608_02717 PF00929 Exonuclease JS608_02718 PF02261 Aspartate decarboxylase JS608_02719 PF02569 Pantoate-beta-alanine ligase JS608_02720 PF02548 Ketopantoate hydroxymethyltransferase JS608_02721 PF02237 Biotin protein ligase C terminal domain JS608_02721 PF08279 HTH domain JS608_02721 PF03099 Biotin/lipoate A/B protein ligase family JS608_02722 PF01743 Poly A polymerase head domain JS608_02722 PF12627 Probable RNA and SrmB- binding site of polymerase A JS608_02722 PF13735 tRNA nucleotidyltransferase domain 2 putative JS608_02723 PF13439 Glycosyltransferase Family 4 JS608_02723 PF00534 Glycosyl transferases group 1 JS608_02724 PF02585 GlcNAc-PI de-N-acetylase JS608_02725 PF02142 MGS-like domain JS608_02726 PF05173 Dihydrodipicolinate reductase, C-terminus JS608_02726 PF01113 Dihydrodipicolinate reductase, N-terminus JS608_02727 PF03819 MazG nucleotide pyrophosphohydrolase domain JS608_02728 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JS608_02728 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JS608_02729 PF00190 Cupin JS608_02730 PF09577 Sporulation protein YpjB (SpoYpjB) JS608_02731 PF07187 Protein of unknown function (DUF1405) JS608_02732 PF00032 Cytochrome b(C-terminal)/b6/petD JS608_02732 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JS608_02733 PF00033 Cytochrome b/b6/petB JS608_02734 PF00355 Rieske [2Fe-2S] domain JS608_02735 PF10673 Protein of unknown function (DUF2487) JS608_02736 PF08858 IDEAL domain JS608_02736 PF08864 UPF0302 domain JS608_02738 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JS608_02739 PF02153 Prephenate dehydrogenase JS608_02739 PF01842 ACT domain JS608_02740 PF00155 Aminotransferase class I and II JS608_02741 PF00290 Tryptophan synthase alpha chain JS608_02742 PF00291 Pyridoxal-phosphate dependent enzyme JS608_02743 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JS608_02744 PF00218 Indole-3-glycerol phosphate synthase JS608_02746 PF04715 Anthranilate synthase component I, N terminal region JS608_02746 PF00425 chorismate binding enzyme JS608_02747 PF07736 Chorismate mutase type I JS608_02748 PF01761 3-dehydroquinate synthase JS608_02749 PF01264 Chorismate synthase JS608_02750 PF03705 CheR methyltransferase, all-alpha domain JS608_02750 PF01739 CheR methyltransferase, SAM binding domain JS608_02751 PF00334 Nucleoside diphosphate kinase JS608_02752 PF00348 Polyprenyl synthetase JS608_02753 PF01209 ubiE/COQ5 methyltransferase family JS608_02754 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 JS608_02755 PF02081 Tryptophan RNA-binding attenuator protein JS608_02756 PF01227 GTP cyclohydrolase I JS608_02757 PF00216 Bacterial DNA-binding protein JS608_02758 PF09547 Stage IV sporulation protein A (spore_IV_A) JS608_02760 PF10966 Protein of unknown function (DUF2768) JS608_02761 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JS608_02761 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JS608_02762 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JS608_02762 PF01926 50S ribosome-binding GTPase JS608_02764 PF14140 YpzI-like protein JS608_02765 PF01070 FMN-dependent dehydrogenase JS608_02766 PF00575 S1 RNA binding domain JS608_02767 PF02224 Cytidylate kinase JS608_02768 PF17313 Family of unknown function (DUF5359) JS608_02770 PF03413 Peptidase propeptide and YPEB domain JS608_02770 PF14620 YpeB sporulation JS608_02771 PF01471 Putative peptidoglycan binding domain JS608_02771 PF07486 Cell Wall Hydrolase JS608_02772 PF13367 PrsW family intramembrane metalloprotease JS608_02774 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JS608_02774 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JS608_02775 PF05389 Negative regulator of genetic competence (MecA) JS608_02776 PF00149 Calcineurin-like phosphoesterase JS608_02777 PF01476 LysM domain JS608_02778 PF02517 CPBP intramembrane metalloprotease JS608_02779 PF00270 DEAD/DEAH box helicase JS608_02779 PF00271 Helicase conserved C-terminal domain JS608_02780 PF14493 Helix-turn-helix domain JS608_02782 PF12822 ECF transporter, substrate-specific component JS608_02783 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JS608_02783 PF01842 ACT domain JS608_02783 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JS608_02785 PF04542 Sigma-70 region 2 JS608_02785 PF08281 Sigma-70, region 4 JS608_02786 PF00672 HAMP domain JS608_02786 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_02786 PF18698 Histidine kinase sensor domain JS608_02786 PF00512 His Kinase A (phospho-acceptor) domain JS608_02786 PF00989 PAS fold JS608_02787 PF00486 Transcriptional regulatory protein, C terminal JS608_02787 PF00072 Response regulator receiver domain JS608_02788 PF01578 Cytochrome C assembly protein JS608_02789 PF05140 ResB-like family JS608_02790 PF00578 AhpC/TSA family JS608_02791 PF00849 RNA pseudouridylate synthase JS608_02791 PF01479 S4 domain JS608_02792 PF07670 Nucleoside recognition JS608_02793 PF07670 Nucleoside recognition JS608_02794 PF07943 Penicillin-binding protein 5, C-terminal domain JS608_02794 PF00768 D-alanyl-D-alanine carboxypeptidase JS608_02795 PF13047 Protein of unknown function (DUF3907) JS608_02796 PF04079 Segregation and condensation complex subunit ScpB JS608_02797 PF02616 Segregation and condensation protein ScpA JS608_02799 PF03745 Domain of unknown function (DUF309) JS608_02800 PF00583 Acetyltransferase (GNAT) family JS608_02801 PF00885 6,7-dimethyl-8-ribityllumazine synthase JS608_02802 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JS608_02802 PF00925 GTP cyclohydrolase II JS608_02803 PF00677 Lumazine binding domain JS608_02804 PF01872 RibD C-terminal domain JS608_02804 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JS608_02806 PF10502 Signal peptidase, peptidase S26 JS608_02808 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JS608_02809 PF06207 Protein of unknown function (DUF1002) JS608_02810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JS608_02810 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JS608_02811 PF03323 Bacillus/Clostridium GerA spore germination protein JS608_02812 PF14097 Stage V sporulation protein AE1 JS608_02813 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JS608_02815 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JS608_02816 PF13782 Stage V sporulation protein AB JS608_02817 PF12164 Stage V sporulation protein AA JS608_02818 PF04542 Sigma-70 region 2 JS608_02818 PF04539 Sigma-70 region 3 JS608_02818 PF04545 Sigma-70, region 4 JS608_02819 PF13581 Histidine kinase-like ATPase domain JS608_02820 PF01740 STAS domain JS608_02821 PF07943 Penicillin-binding protein 5, C-terminal domain JS608_02821 PF00768 D-alanyl-D-alanine carboxypeptidase JS608_02822 PF01048 Phosphorylase superfamily JS608_02823 PF01676 Metalloenzyme superfamily JS608_02824 PF02899 Phage integrase, N-terminal SAM-like domain JS608_02824 PF00589 Phage integrase family JS608_02825 PF14004 Protein of unknown function (DUF4227) JS608_02826 PF01475 Ferric uptake regulator family JS608_02827 PF01944 Stage II sporulation protein M JS608_02831 PF03949 Malic enzyme, NAD binding domain JS608_02831 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JS608_02831 PF00390 Malic enzyme, N-terminal domain JS608_02832 PF03553 Na+/H+ antiporter family JS608_02833 PF10415 Fumarase C C-terminus JS608_02833 PF00206 Lyase JS608_02834 PF00710 Asparaginase, N-terminal JS608_02834 PF17763 Glutaminase/Asparaginase C-terminal domain JS608_02835 PF01381 Helix-turn-helix JS608_02837 PF00293 NUDIX domain JS608_02838 PF13072 Mother cell inhibitor of FtsZ JS608_02839 PF00248 Aldo/keto reductase family JS608_02842 PF10827 Protein of unknown function (DUF2552) JS608_02843 PF01521 Iron-sulphur cluster biosynthesis JS608_02844 PF04229 GrpB protein JS608_02844 PF13673 Acetyltransferase (GNAT) domain JS608_02845 PF03992 Antibiotic biosynthesis monooxygenase JS608_02846 PF00583 Acetyltransferase (GNAT) family JS608_02847 PF11799 impB/mucB/samB family C-terminal domain JS608_02847 PF00817 impB/mucB/samB family JS608_02848 PF08863 YolD-like protein JS608_02849 PF14164 YqzH-like protein JS608_02850 PF01594 AI-2E family transporter JS608_02853 PF00485 Phosphoribulokinase / Uridine kinase family JS608_02854 PF00291 Pyridoxal-phosphate dependent enzyme JS608_02855 PF00106 short chain dehydrogenase JS608_02856 PF00753 Metallo-beta-lactamase superfamily JS608_02857 PF14748 Pyrroline-5-carboxylate reductase dimerisation JS608_02857 PF03807 NADP oxidoreductase coenzyme F420-dependent JS608_02858 PF00378 Enoyl-CoA hydratase/isomerase JS608_02859 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal JS608_02859 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal JS608_02860 PF00067 Cytochrome P450 JS608_02861 PF16197 Ketoacyl-synthetase C-terminal extension JS608_02861 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_02861 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_02861 PF08659 KR domain JS608_02861 PF08242 Methyltransferase domain JS608_02861 PF00550 Phosphopantetheine attachment site JS608_02861 PF14765 Polyketide synthase dehydratase JS608_02862 PF14765 Polyketide synthase dehydratase JS608_02862 PF00550 Phosphopantetheine attachment site JS608_02862 PF08242 Methyltransferase domain JS608_02862 PF16197 Ketoacyl-synthetase C-terminal extension JS608_02862 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_02862 PF08659 KR domain JS608_02862 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_02863 PF00550 Phosphopantetheine attachment site JS608_02863 PF14765 Polyketide synthase dehydratase JS608_02863 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_02863 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_02863 PF16197 Ketoacyl-synthetase C-terminal extension JS608_02863 PF13193 AMP-binding enzyme C-terminal domain JS608_02863 PF00501 AMP-binding enzyme JS608_02863 PF08659 KR domain JS608_02863 PF00668 Condensation domain JS608_02864 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_02864 PF13193 AMP-binding enzyme C-terminal domain JS608_02864 PF00501 AMP-binding enzyme JS608_02864 PF00668 Condensation domain JS608_02864 PF16197 Ketoacyl-synthetase C-terminal extension JS608_02864 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_02864 PF08659 KR domain JS608_02864 PF00550 Phosphopantetheine attachment site JS608_02864 PF14765 Polyketide synthase dehydratase JS608_02866 PF13193 AMP-binding enzyme C-terminal domain JS608_02866 PF00501 AMP-binding enzyme JS608_02866 PF00668 Condensation domain JS608_02866 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_02866 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_02866 PF08659 KR domain JS608_02866 PF00550 Phosphopantetheine attachment site JS608_02866 PF16197 Ketoacyl-synthetase C-terminal extension JS608_02866 PF14765 Polyketide synthase dehydratase JS608_02867 PF08242 Methyltransferase domain JS608_02867 PF02801 Beta-ketoacyl synthase, C-terminal domain JS608_02867 PF00550 Phosphopantetheine attachment site JS608_02867 PF14765 Polyketide synthase dehydratase JS608_02867 PF00109 Beta-ketoacyl synthase, N-terminal domain JS608_02867 PF16197 Ketoacyl-synthetase C-terminal extension JS608_02867 PF08659 KR domain JS608_02869 PF00501 AMP-binding enzyme JS608_02869 PF13193 AMP-binding enzyme C-terminal domain JS608_02872 PF00698 Acyl transferase domain JS608_02872 PF03060 Nitronate monooxygenase JS608_02873 PF00467 KOW motif JS608_02873 PF02357 Transcription termination factor nusG JS608_02874 PF03466 LysR substrate binding domain JS608_02874 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_02876 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JS608_02877 PF12146 Serine aminopeptidase, S33 JS608_02878 PF12706 Beta-lactamase superfamily domain JS608_02879 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JS608_02879 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JS608_02880 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JS608_02880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JS608_02881 PF00817 impB/mucB/samB family JS608_02881 PF11798 IMS family HHH motif JS608_02881 PF11799 impB/mucB/samB family C-terminal domain JS608_02883 PF02096 60Kd inner membrane protein JS608_02884 PF01546 Peptidase family M20/M25/M40 JS608_02884 PF07687 Peptidase dimerisation domain JS608_02885 PF01039 Carboxyl transferase domain JS608_02888 PF03734 L,D-transpeptidase catalytic domain JS608_02889 PF06081 Aromatic acid exporter family member 1 JS608_02889 PF11728 Putative aromatic acid exporter C-terminal domain JS608_02890 PF00005 ABC transporter JS608_02891 PF00528 Binding-protein-dependent transport system inner membrane component JS608_02892 PF00497 Bacterial extracellular solute-binding proteins, family 3 JS608_02893 PF06491 Disulphide isomerase JS608_02894 PF00781 Diacylglycerol kinase catalytic domain JS608_02895 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JS608_02895 PF00364 Biotin-requiring enzyme JS608_02895 PF02817 e3 binding domain JS608_02896 PF02779 Transketolase, pyrimidine binding domain JS608_02896 PF02780 Transketolase, C-terminal domain JS608_02897 PF00676 Dehydrogenase E1 component JS608_02898 PF07992 Pyridine nucleotide-disulphide oxidoreductase JS608_02898 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JS608_02899 PF00871 Acetokinase family JS608_02900 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JS608_02900 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JS608_02901 PF01515 Phosphate acetyl/butaryl transferase JS608_02902 PF00158 Sigma-54 interaction domain JS608_02902 PF00989 PAS fold JS608_02902 PF02954 Bacterial regulatory protein, Fis family JS608_02903 PF11118 Protein of unknown function (DUF2627) JS608_02906 PF03972 MmgE/PrpD family JS608_02907 PF00285 Citrate synthase, C-terminal domain JS608_02908 PF02770 Acyl-CoA dehydrogenase, middle domain JS608_02908 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JS608_02908 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JS608_02909 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JS608_02909 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JS608_02910 PF02803 Thiolase, C-terminal domain JS608_02910 PF00108 Thiolase, N-terminal domain JS608_02911 PF03009 Glycerophosphoryl diester phosphodiesterase family JS608_02912 PF01520 N-acetylmuramoyl-L-alanine amidase JS608_02917 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JS608_02918 PF10676 Spore germination protein gerPA/gerPF JS608_02919 PF10676 Spore germination protein gerPA/gerPF JS608_02920 PF00842 Alanine racemase, C-terminal domain JS608_02920 PF01168 Alanine racemase, N-terminal domain JS608_02921 PF00072 Response regulator receiver domain JS608_02921 PF08769 Sporulation initiation factor Spo0A C terminal JS608_02922 PF17820 PDZ domain JS608_02922 PF05580 SpoIVB peptidase S55 JS608_02924 PF01316 Arginine repressor, DNA binding domain JS608_02924 PF02863 Arginine repressor, C-terminal domain JS608_02925 PF01479 S4 domain JS608_02925 PF01728 FtsJ-like methyltransferase JS608_02926 PF02779 Transketolase, pyrimidine binding domain JS608_02926 PF02780 Transketolase, C-terminal domain JS608_02926 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JS608_02927 PF00348 Polyprenyl synthetase JS608_02928 PF02609 Exonuclease VII small subunit JS608_02929 PF02601 Exonuclease VII, large subunit JS608_02929 PF13742 OB-fold nucleic acid binding domain JS608_02930 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JS608_02930 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JS608_02931 PF01029 NusB family JS608_02932 PF03780 Asp23 family, cell envelope-related function JS608_02933 PF02785 Biotin carboxylase C-terminal domain JS608_02933 PF00289 Biotin carboxylase, N-terminal domain JS608_02933 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JS608_02934 PF00364 Biotin-requiring enzyme JS608_02935 PF12685 SpoIIIAH-like protein JS608_02937 PF09581 Stage III sporulation protein AF (Spore_III_AF) JS608_02938 PF09546 Stage III sporulation protein AE (spore_III_AE) JS608_02939 PF06686 Stage III sporulation protein AC/AD protein family JS608_02940 PF06686 Stage III sporulation protein AC/AD protein family JS608_02941 PF09548 Stage III sporulation protein AB (spore_III_AB) JS608_02943 PF10942 Protein of unknown function (DUF2619) JS608_02944 PF08207 Elongation factor P (EF-P) KOW-like domain JS608_02944 PF09285 Elongation factor P, C-terminal JS608_02944 PF01132 Elongation factor P (EF-P) OB domain JS608_02945 PF01321 Creatinase/Prolidase N-terminal domain JS608_02945 PF00557 Metallopeptidase family M24 JS608_02946 PF11085 Conserved membrane protein YqhR JS608_02947 PF07136 Protein of unknown function (DUF1385) JS608_02949 PF01734 Patatin-like phospholipase JS608_02950 PF02742 Iron dependent repressor, metal binding and dimerisation domain JS608_02950 PF01325 Iron dependent repressor, N-terminal DNA binding domain JS608_02951 PF03099 Biotin/lipoate A/B protein ligase family JS608_02952 PF00581 Rhodanese-like domain JS608_02953 PF02347 Glycine cleavage system P-protein JS608_02954 PF02347 Glycine cleavage system P-protein JS608_02955 PF08669 Glycine cleavage T-protein C-terminal barrel domain JS608_02955 PF01571 Aminomethyltransferase folate-binding domain JS608_02956 PF00271 Helicase conserved C-terminal domain JS608_02956 PF00176 SNF2 family N-terminal domain JS608_02957 PF11079 Bacterial protein YqhG of unknown function JS608_02958 PF08671 Anti-repressor SinI JS608_02959 PF01381 Helix-turn-helix JS608_02959 PF08671 Anti-repressor SinI JS608_02960 PF12389 Camelysin metallo-endopeptidase JS608_02963 PF13028 Protein of unknown function (DUF3889) JS608_02964 PF14038 YqzE-like protein JS608_02965 PF14173 ComG operon protein 7 JS608_02966 PF15980 Putative Competence protein ComGF JS608_02968 PF07963 Prokaryotic N-terminal methylation motif JS608_02969 PF07963 Prokaryotic N-terminal methylation motif JS608_02970 PF00482 Type II secretion system (T2SS), protein F JS608_02971 PF00437 Type II/IV secretion system protein JS608_02972 PF01544 CorA-like Mg2+ transporter protein JS608_02973 PF00571 CBS domain JS608_02973 PF03471 Transporter associated domain JS608_02973 PF01595 Cyclin M transmembrane N-terminal domain JS608_02974 PF01740 STAS domain JS608_02974 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain JS608_02976 PF03960 ArsC family JS608_02977 PF11117 Protein of unknown function (DUF2626) JS608_02978 PF00753 Metallo-beta-lactamase superfamily JS608_02979 PF10958 Protein of unknown function (DUF2759) JS608_02980 PF01910 Thiamine-binding protein JS608_02982 PF00246 Zinc carboxypeptidase JS608_02983 PF00480 ROK family JS608_02984 PF03553 Na+/H+ antiporter family JS608_02986 PF01812 5-formyltetrahydrofolate cyclo-ligase family JS608_02987 PF00471 Ribosomal protein L33 JS608_02990 PF00005 ABC transporter JS608_02991 PF00005 ABC transporter JS608_02992 PF00528 Binding-protein-dependent transport system inner membrane component JS608_02993 PF00528 Binding-protein-dependent transport system inner membrane component JS608_02994 PF12849 PBP superfamily domain JS608_02995 PF12849 PBP superfamily domain JS608_02996 PF00905 Penicillin binding protein transpeptidase domain JS608_02996 PF03717 Penicillin-binding Protein dimerisation domain JS608_02997 PF07690 Major Facilitator Superfamily JS608_02998 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JS608_02998 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JS608_02999 PF04306 Protein of unknown function (DUF456) JS608_03000 PF06691 Protein of unknown function (DUF1189) JS608_03002 PF04551 GcpE protein JS608_03005 PF01475 Ferric uptake regulator family JS608_03006 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JS608_03006 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JS608_03007 PF11116 Protein of unknown function (DUF2624) JS608_03008 PF01261 Xylose isomerase-like TIM barrel JS608_03009 PF00271 Helicase conserved C-terminal domain JS608_03009 PF00270 DEAD/DEAH box helicase JS608_03010 PF14181 YqfQ-like protein JS608_03011 PF02401 LytB protein JS608_03012 PF01784 NIF3 (NGG1p interacting factor 3) JS608_03013 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JS608_03014 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JS608_03015 PF03979 Sigma-70 factor, region 1.1 JS608_03015 PF00140 Sigma-70 factor, region 1.2 JS608_03015 PF04542 Sigma-70 region 2 JS608_03015 PF04539 Sigma-70 region 3 JS608_03015 PF04545 Sigma-70, region 4 JS608_03016 PF10410 DnaB-helicase binding domain of primase JS608_03016 PF08275 DNA primase catalytic core, N-terminal domain JS608_03016 PF01807 CHC2 zinc finger JS608_03017 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JS608_03018 PF03618 Kinase/pyrophosphorylase JS608_03019 PF08279 HTH domain JS608_03019 PF00571 CBS domain JS608_03020 PF02092 Glycyl-tRNA synthetase beta subunit JS608_03021 PF02091 Glycyl-tRNA synthetase alpha subunit JS608_03022 PF02565 Recombination protein O C terminal JS608_03022 PF11967 Recombination protein O N terminal JS608_03023 PF14006 YqzL-like protein JS608_03024 PF07650 KH domain JS608_03024 PF01926 50S ribosome-binding GTPase JS608_03025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JS608_03026 PF01219 Prokaryotic diacylglycerol kinase JS608_03027 PF02130 Uncharacterized protein family UPF0054 JS608_03028 PF07698 7TM receptor with intracellular HD hydrolase JS608_03028 PF07697 7TM-HD extracellular JS608_03028 PF01966 HD domain JS608_03029 PF02562 PhoH-like protein JS608_03030 PF06898 Putative stage IV sporulation protein YqfD JS608_03031 PF07873 YabP family JS608_03033 PF12127 SigmaW regulon antibacterial JS608_03034 PF01972 Serine dehydrogenase proteinase JS608_03034 PF01957 NfeD-like C-terminal, partner-binding JS608_03035 PF09424 Yqey-like protein JS608_03036 PF01165 Ribosomal protein S21 JS608_03038 PF00919 Uncharacterized protein family UPF0004 JS608_03038 PF04055 Radical SAM superfamily JS608_03038 PF01938 TRAM domain JS608_03039 PF04452 RNA methyltransferase JS608_03041 PF01556 DnaJ C terminal domain JS608_03041 PF00684 DnaJ central domain JS608_03041 PF00226 DnaJ domain JS608_03042 PF00012 Hsp70 protein JS608_03043 PF01025 GrpE JS608_03044 PF01628 HrcA protein C terminal domain JS608_03045 PF04055 Radical SAM superfamily JS608_03045 PF06969 HemN C-terminal domain JS608_03046 PF00679 Elongation factor G C-terminus JS608_03046 PF00009 Elongation factor Tu GTP binding domain JS608_03046 PF03144 Elongation factor Tu domain 2 JS608_03046 PF06421 GTP-binding protein LepA C-terminus JS608_03047 PF12438 Protein of unknown function (DUF3679) JS608_03048 PF07454 Stage II sporulation protein P (SpoIIP) JS608_03049 PF03418 Germination protease JS608_03050 PF01649 Ribosomal protein S20 JS608_03051 PF06144 DNA polymerase III, delta subunit JS608_03053 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JS608_03054 PF10531 SLBB domain JS608_03055 PF14748 Pyrroline-5-carboxylate reductase dimerisation JS608_03055 PF03807 NADP oxidoreductase coenzyme F420-dependent JS608_03056 PF13649 Methyltransferase domain JS608_03058 PF01966 HD domain JS608_03059 PF01467 Cytidylyltransferase-like JS608_03060 PF01985 CRS1 / YhbY (CRM) domain JS608_03061 PF01488 Shikimate / quinate 5-dehydrogenase JS608_03061 PF08501 Shikimate dehydrogenase substrate binding domain JS608_03061 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JS608_03062 PF01926 50S ribosome-binding GTPase JS608_03065 PF00657 GDSL-like Lipase/Acylhydrolase JS608_03066 PF01522 Polysaccharide deacetylase JS608_03067 PF09335 SNARE associated Golgi protein JS608_03069 PF04542 Sigma-70 region 2 JS608_03069 PF04545 Sigma-70, region 4 JS608_03072 PF06445 GyrI-like small molecule binding domain JS608_03072 PF12833 Helix-turn-helix domain JS608_03075 PF07690 Major Facilitator Superfamily JS608_03076 PF00583 Acetyltransferase (GNAT) family JS608_03077 PF05163 DinB family JS608_03081 PF01418 Helix-turn-helix domain, rpiR family JS608_03081 PF01380 SIS domain JS608_03082 PF01238 Phosphomannose isomerase type I JS608_03083 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JS608_03083 PF02378 Phosphotransferase system, EIIC JS608_03083 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JS608_03084 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JS608_03084 PF00874 PRD domain JS608_03084 PF08279 HTH domain JS608_03084 PF05043 Mga helix-turn-helix domain JS608_03086 PF12706 Beta-lactamase superfamily domain JS608_03087 PF04073 Aminoacyl-tRNA editing domain JS608_03088 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_03088 PF03466 LysR substrate binding domain JS608_03089 PF07690 Major Facilitator Superfamily JS608_03090 PF00067 Cytochrome P450 JS608_03090 PF00175 Oxidoreductase NAD-binding domain JS608_03090 PF00667 FAD binding domain JS608_03090 PF00258 Flavodoxin JS608_03091 PF16295 Tetracyclin repressor-like, C-terminal domain JS608_03091 PF00440 Bacterial regulatory proteins, tetR family JS608_03092 PF08241 Methyltransferase domain JS608_03093 PF09501 Probable sporulation protein (Bac_small_yrzI) JS608_03094 PF01226 Formate/nitrite transporter JS608_03095 PF10057 Uncharacterized conserved protein (DUF2294) JS608_03096 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JS608_03096 PF00037 4Fe-4S binding domain JS608_03096 PF00384 Molybdopterin oxidoreductase JS608_03096 PF01568 Molydopterin dinucleotide binding domain JS608_03096 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JS608_03097 PF00384 Molybdopterin oxidoreductase JS608_03097 PF01568 Molydopterin dinucleotide binding domain JS608_03097 PF00037 4Fe-4S binding domain JS608_03097 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JS608_03097 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JS608_03098 PF07849 Protein of unknown function (DUF1641) JS608_03099 PF14143 YrhC-like protein JS608_03100 PF01053 Cys/Met metabolism PLP-dependent enzyme JS608_03101 PF00291 Pyridoxal-phosphate dependent enzyme JS608_03102 PF01048 Phosphorylase superfamily JS608_03103 PF13649 Methyltransferase domain JS608_03104 PF10750 Protein of unknown function (DUF2536) JS608_03105 PF07423 Domain of unknown function (DUF1510) JS608_03106 PF00905 Penicillin binding protein transpeptidase domain JS608_03106 PF03717 Penicillin-binding Protein dimerisation domain JS608_03107 PF01272 Transcription elongation factor, GreA/GreB, C-term JS608_03107 PF03449 Transcription elongation factor, N-terminal JS608_03108 PF00485 Phosphoribulokinase / Uridine kinase family JS608_03109 PF01136 Peptidase family U32 JS608_03109 PF16325 Peptidase family U32 C-terminal domain JS608_03110 PF01136 Peptidase family U32 JS608_03111 PF01596 O-methyltransferase JS608_03112 PF02618 YceG-like family JS608_03113 PF06949 Protein of unknown function (DUF1292) JS608_03114 PF03652 Holliday junction resolvase JS608_03115 PF06135 IreB regulatory phosphoprotein JS608_03116 PF02272 DHHA1 domain JS608_03116 PF01411 tRNA synthetases class II (A) JS608_03116 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JS608_03117 PF01594 AI-2E family transporter JS608_03118 PF00005 ABC transporter JS608_03119 PF00497 Bacterial extracellular solute-binding proteins, family 3 JS608_03120 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03121 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03122 PF13056 Protein of unknown function (DUF3918) JS608_03124 PF05239 PRC-barrel domain JS608_03126 PF07719 Tetratricopeptide repeat JS608_03126 PF13181 Tetratricopeptide repeat JS608_03128 PF00266 Aminotransferase class-V JS608_03129 PF02082 Transcriptional regulator JS608_03130 PF16193 AAA C-terminal domain JS608_03130 PF12002 MgsA AAA+ ATPase C terminal JS608_03130 PF05496 Holliday junction DNA helicase RuvB P-loop domain JS608_03131 PF00899 ThiF family JS608_03133 PF00152 tRNA synthetases class II (D, K and N) JS608_03133 PF01336 OB-fold nucleic acid binding domain JS608_03133 PF02938 GAD domain JS608_03134 PF03129 Anticodon binding domain JS608_03134 PF13393 Histidyl-tRNA synthetase JS608_03136 PF17449 Uncharacterized YrzK-like JS608_03137 PF01520 N-acetylmuramoyl-L-alanine amidase JS608_03137 PF08239 Bacterial SH3 domain JS608_03138 PF02580 D-Tyr-tRNA(Tyr) deacylase JS608_03139 PF13291 ACT domain JS608_03139 PF04607 Region found in RelA / SpoT proteins JS608_03139 PF02824 TGS domain JS608_03140 PF00156 Phosphoribosyl transferase domain JS608_03141 PF01368 DHH family JS608_03141 PF17768 RecJ OB domain JS608_03141 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JS608_03141 PF02272 DHHA1 domain JS608_03142 PF06305 Lipopolysaccharide assembly protein A domain JS608_03143 PF02080 TrkA-C domain JS608_03144 PF07549 SecD/SecF GG Motif JS608_03144 PF02355 Protein export membrane protein JS608_03145 PF13797 Post-transcriptional regulator JS608_03146 PF01943 Polysaccharide biosynthesis protein JS608_03146 PF14667 Polysaccharide biosynthesis C-terminal domain JS608_03147 PF04239 Protein of unknown function (DUF421) JS608_03148 PF12670 Protein of unknown function (DUF3792) JS608_03149 PF02699 Preprotein translocase subunit JS608_03150 PF01702 Queuine tRNA-ribosyltransferase JS608_03151 PF02547 Queuosine biosynthesis protein JS608_03152 PF11146 Protein of unknown function (DUF2905) JS608_03153 PF17864 RuvB AAA lid domain JS608_03153 PF05491 RuvB C-terminal winged helix domain JS608_03153 PF05496 Holliday junction DNA helicase RuvB P-loop domain JS608_03154 PF01330 RuvA N terminal domain JS608_03154 PF07499 RuvA, C-terminal domain JS608_03155 PF08955 BofC C-terminal domain JS608_03155 PF08977 Bypass of Forespore C, N terminal JS608_03157 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JS608_03158 PF01476 LysM domain JS608_03159 PF02445 Quinolinate synthetase A protein JS608_03160 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JS608_03160 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JS608_03161 PF02910 Fumarate reductase flavoprotein C-term JS608_03161 PF00890 FAD binding domain JS608_03162 PF00266 Aminotransferase class-V JS608_03163 PF02829 3H domain JS608_03163 PF08279 HTH domain JS608_03164 PF01842 ACT domain JS608_03164 PF00800 Prephenate dehydratase JS608_03165 PF01842 ACT domain JS608_03166 PF01926 50S ribosome-binding GTPase JS608_03166 PF09269 Domain of unknown function (DUF1967) JS608_03166 PF01018 GTP1/OBG JS608_03167 PF14682 Sporulation initiation phospho-transferase B, C-terminal JS608_03167 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JS608_03168 PF01016 Ribosomal L27 protein JS608_03169 PF04327 Cysteine protease Prp JS608_03170 PF00829 Ribosomal prokaryotic L21 protein JS608_03171 PF02163 Peptidase family M50 JS608_03172 PF01551 Peptidase family M23 JS608_03173 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JS608_03174 PF03775 Septum formation inhibitor MinC, C-terminal domain JS608_03175 PF04093 rod shape-determining protein MreD JS608_03176 PF04085 rod shape-determining protein MreC JS608_03178 PF04002 RadC-like JAB domain JS608_03179 PF02545 Maf-like protein JS608_03180 PF05036 Sporulation related domain JS608_03181 PF06750 Bacterial Peptidase A24 N-terminal domain JS608_03181 PF01478 Type IV leader peptidase family JS608_03182 PF02875 Mur ligase family, glutamate ligase domain JS608_03182 PF08245 Mur ligase middle domain JS608_03183 PF10458 Valyl tRNA synthetase tRNA binding arm JS608_03183 PF00133 tRNA synthetases class I (I, L, M and V) JS608_03183 PF08264 Anticodon-binding domain of tRNA JS608_03186 PF01476 LysM domain JS608_03187 PF00202 Aminotransferase class-III JS608_03188 PF00490 Delta-aminolevulinic acid dehydratase JS608_03189 PF02602 Uroporphyrinogen-III synthase HemD JS608_03190 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JS608_03190 PF03900 Porphobilinogen deaminase, C-terminal domain JS608_03191 PF01578 Cytochrome C assembly protein JS608_03192 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JS608_03192 PF01488 Shikimate / quinate 5-dehydrogenase JS608_03192 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JS608_03194 PF01926 50S ribosome-binding GTPase JS608_03195 PF02190 ATP-dependent protease La (LON) substrate-binding domain JS608_03195 PF00004 ATPase family associated with various cellular activities (AAA) JS608_03195 PF05362 Lon protease (S16) C-terminal proteolytic domain JS608_03196 PF00004 ATPase family associated with various cellular activities (AAA) JS608_03196 PF05362 Lon protease (S16) C-terminal proteolytic domain JS608_03197 PF07724 AAA domain (Cdc48 subfamily) JS608_03197 PF10431 C-terminal, D2-small domain, of ClpB protein JS608_03197 PF06689 ClpX C4-type zinc finger JS608_03198 PF05698 Bacterial trigger factor protein (TF) C-terminus JS608_03198 PF05697 Bacterial trigger factor protein (TF) JS608_03198 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JS608_03200 PF00694 Aconitase C-terminal domain JS608_03201 PF00330 Aconitase family (aconitate hydratase) JS608_03202 PF00180 Isocitrate/isopropylmalate dehydrogenase JS608_03203 PF08502 LeuA allosteric (dimerisation) domain JS608_03203 PF00682 HMGL-like JS608_03204 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JS608_03204 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JS608_03205 PF01842 ACT domain JS608_03205 PF10369 Small subunit of acetolactate synthase JS608_03211 PF12850 Calcineurin-like phosphoesterase superfamily domain JS608_03212 PF01725 Ham1 family JS608_03213 PF01138 3' exoribonuclease family, domain 1 JS608_03213 PF03725 3' exoribonuclease family, domain 2 JS608_03214 PF10646 Sporulation and spore germination JS608_03215 PF01177 Asp/Glu/Hydantoin racemase JS608_03216 PF01047 MarR family JS608_03217 PF00196 Bacterial regulatory proteins, luxR family JS608_03218 PF03061 Thioesterase superfamily JS608_03219 PF13085 2Fe-2S iron-sulfur cluster binding domain JS608_03219 PF13183 4Fe-4S dicluster domain JS608_03220 PF00890 FAD binding domain JS608_03220 PF02910 Fumarate reductase flavoprotein C-term JS608_03221 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JS608_03222 PF10702 Protein of unknown function (DUF2507) JS608_03223 PF13840 ACT domain JS608_03223 PF00696 Amino acid kinase family JS608_03223 PF01842 ACT domain JS608_03224 PF01541 GIY-YIG catalytic domain JS608_03224 PF02151 UvrB/uvrC motif JS608_03224 PF08459 UvrC Helix-hairpin-helix N-terminal JS608_03225 PF00085 Thioredoxin JS608_03226 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JS608_03227 PF01012 Electron transfer flavoprotein domain JS608_03227 PF00766 Electron transfer flavoprotein FAD-binding domain JS608_03228 PF01012 Electron transfer flavoprotein domain JS608_03229 PF00378 Enoyl-CoA hydratase/isomerase JS608_03230 PF08359 YsiA-like protein, C-terminal region JS608_03230 PF00440 Bacterial regulatory proteins, tetR family JS608_03231 PF00501 AMP-binding enzyme JS608_03231 PF13193 AMP-binding enzyme C-terminal domain JS608_03232 PF10924 Protein of unknown function (DUF2711) JS608_03233 PF03994 Domain of Unknown Function (DUF350) JS608_03234 PF00488 MutS domain V JS608_03234 PF01713 Smr domain JS608_03235 PF02811 PHP domain JS608_03235 PF14716 Helix-hairpin-helix domain JS608_03235 PF14791 DNA polymerase beta thumb JS608_03236 PF02674 Colicin V production protein JS608_03237 PF05164 Cell division protein ZapA JS608_03238 PF01351 Ribonuclease HII JS608_03238 PF11858 Domain of unknown function (DUF3378) JS608_03239 PF03484 tRNA synthetase B5 domain JS608_03239 PF03147 Ferredoxin-fold anticodon binding domain JS608_03239 PF01588 Putative tRNA binding domain JS608_03239 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JS608_03239 PF03483 B3/4 domain JS608_03240 PF01409 tRNA synthetases class II core domain (F) JS608_03240 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JS608_03241 PF00588 SpoU rRNA Methylase family JS608_03241 PF08032 RNA 2'-O ribose methyltransferase substrate binding JS608_03242 PF14098 Small, acid-soluble spore protein I JS608_03243 PF05651 Putative sugar diacid recognition JS608_03243 PF17853 GGDEF-like domain JS608_03243 PF13556 PucR C-terminal helix-turn-helix domain JS608_03244 PF02913 FAD linked oxidases, C-terminal domain JS608_03244 PF01565 FAD binding domain JS608_03245 PF02754 Cysteine-rich domain JS608_03245 PF13183 4Fe-4S dicluster domain JS608_03246 PF02554 Carbon starvation protein CstA JS608_03246 PF13722 5TM C-terminal transporter carbon starvation CstA JS608_03247 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JS608_03248 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03249 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03250 PF01547 Bacterial extracellular solute-binding protein JS608_03251 PF13685 Iron-containing alcohol dehydrogenase JS608_03252 PF13344 Haloacid dehalogenase-like hydrolase JS608_03253 PF00596 Class II Aldolase and Adducin N-terminal domain JS608_03254 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JS608_03254 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JS608_03255 PF11762 L-arabinose isomerase C-terminal domain JS608_03255 PF02610 L-arabinose isomerase JS608_03257 PF05343 M42 glutamyl aminopeptidase JS608_03259 PF06961 Protein of unknown function (DUF1294) JS608_03260 PF00453 Ribosomal protein L20 JS608_03261 PF01632 Ribosomal protein L35 JS608_03262 PF00707 Translation initiation factor IF-3, C-terminal domain JS608_03262 PF05198 Translation initiation factor IF-3, N-terminal domain JS608_03263 PF04172 LrgB-like family JS608_03264 PF03788 LrgA family JS608_03265 PF04397 LytTr DNA-binding domain JS608_03265 PF00072 Response regulator receiver domain JS608_03266 PF07694 5TMR of 5TMR-LYT JS608_03266 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_03266 PF06580 Histidine kinase JS608_03267 PF13419 Haloacid dehalogenase-like hydrolase JS608_03268 PF03129 Anticodon binding domain JS608_03268 PF02824 TGS domain JS608_03268 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JS608_03268 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JS608_03269 PF08812 YtxC-like family JS608_03270 PF09335 SNARE associated Golgi protein JS608_03271 PF07319 Primosomal protein DnaI N-terminus JS608_03271 PF01695 IstB-like ATP binding protein JS608_03272 PF07261 Replication initiation and membrane attachment JS608_03273 PF03477 ATP cone domain JS608_03274 PF02675 S-adenosylmethionine decarboxylase JS608_03275 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JS608_03275 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JS608_03276 PF01638 HxlR-like helix-turn-helix JS608_03277 PF07690 Major Facilitator Superfamily JS608_03278 PF00248 Aldo/keto reductase family JS608_03279 PF01121 Dephospho-CoA kinase JS608_03280 PF02659 Putative manganese efflux pump JS608_03281 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JS608_03281 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JS608_03281 PF06827 Zinc finger found in FPG and IleRS JS608_03282 PF01367 5'-3' exonuclease, C-terminal SAM fold JS608_03282 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JS608_03282 PF00476 DNA polymerase family A JS608_03283 PF00512 His Kinase A (phospho-acceptor) domain JS608_03283 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_03283 PF00989 PAS fold JS608_03283 PF16736 Single Cache-like JS608_03284 PF00072 Response regulator receiver domain JS608_03284 PF00486 Transcriptional regulatory protein, C terminal JS608_03285 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JS608_03285 PF00056 lactate/malate dehydrogenase, NAD binding domain JS608_03286 PF00180 Isocitrate/isopropylmalate dehydrogenase JS608_03287 PF00285 Citrate synthase, C-terminal domain JS608_03288 PF11208 Protein of unknown function (DUF2992) JS608_03290 PF01594 AI-2E family transporter JS608_03291 PF04186 FxsA cytoplasmic membrane protein JS608_03292 PF02887 Pyruvate kinase, alpha/beta domain JS608_03292 PF00391 PEP-utilising enzyme, mobile domain JS608_03292 PF00224 Pyruvate kinase, barrel domain JS608_03293 PF00365 Phosphofructokinase JS608_03294 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JS608_03295 PF17848 Acetyl-coA carboxylase zinc finger domain JS608_03295 PF01039 Carboxyl transferase domain JS608_03296 PF03949 Malic enzyme, NAD binding domain JS608_03296 PF00390 Malic enzyme, N-terminal domain JS608_03297 PF07733 Bacterial DNA polymerase III alpha NTPase domain JS608_03297 PF14579 Helix-hairpin-helix motif JS608_03297 PF02811 PHP domain JS608_03297 PF01336 OB-fold nucleic acid binding domain JS608_03297 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JS608_03298 PF14034 Sporulation protein YtrH JS608_03301 PF01368 DHH family JS608_03301 PF02272 DHHA1 domain JS608_03302 PF14007 YtpI-like protein JS608_03303 PF03061 Thioesterase superfamily JS608_03303 PF00571 CBS domain JS608_03303 PF07085 DRTGG domain JS608_03303 PF00392 Bacterial regulatory proteins, gntR family JS608_03307 PF00206 Lyase JS608_03307 PF14698 Argininosuccinate lyase C-terminal JS608_03308 PF00764 Arginosuccinate synthase JS608_03309 PF00994 Probable molybdopterin binding domain JS608_03310 PF00871 Acetokinase family JS608_03311 PF02384 N-6 DNA Methylase JS608_03312 PF08534 Redoxin JS608_03313 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JS608_03314 PF11167 Protein of unknown function (DUF2953) JS608_03315 PF06271 RDD family JS608_03316 PF01343 Peptidase family S49 JS608_03317 PF01513 ATP-NAD kinase JS608_03318 PF07969 Amidohydrolase family JS608_03319 PF00501 AMP-binding enzyme JS608_03319 PF13193 AMP-binding enzyme C-terminal domain JS608_03320 PF00269 Small, acid-soluble spore proteins, alpha/beta type JS608_03321 PF02568 Thiamine biosynthesis protein (ThiI) JS608_03321 PF02926 THUMP domain JS608_03322 PF00266 Aminotransferase class-V JS608_03323 PF05525 Branched-chain amino acid transport protein JS608_03324 PF06160 Septation ring formation regulator, EzrA JS608_03325 PF02811 PHP domain JS608_03326 PF00440 Bacterial regulatory proteins, tetR family JS608_03327 PF13185 GAF domain JS608_03328 PF00990 Diguanylate cyclase, GGDEF domain JS608_03329 PF00163 Ribosomal protein S4/S9 N-terminal domain JS608_03329 PF01479 S4 domain JS608_03330 PF00171 Aldehyde dehydrogenase family JS608_03332 PF00970 Oxidoreductase FAD-binding domain JS608_03332 PF00042 Globin JS608_03332 PF00175 Oxidoreductase NAD-binding domain JS608_03334 PF01965 DJ-1/PfpI family JS608_03338 PF11495 Archaeal transcriptional regulator TrmB JS608_03338 PF01978 Sugar-specific transcriptional regulator TrmB JS608_03341 PF01479 S4 domain JS608_03341 PF00579 tRNA synthetases class I (W and Y) JS608_03342 PF00501 AMP-binding enzyme JS608_03342 PF13193 AMP-binding enzyme C-terminal domain JS608_03343 PF00583 Acetyltransferase (GNAT) family JS608_03344 PF00571 CBS domain JS608_03345 PF00850 Histone deacetylase domain JS608_03346 PF13677 Membrane MotB of proton-channel complex MotA/MotB JS608_03346 PF00691 OmpA family JS608_03347 PF01618 MotA/TolQ/ExbB proton channel family JS608_03348 PF00356 Bacterial regulatory proteins, lacI family JS608_03349 PF00793 DAHP synthetase I family JS608_03349 PF01817 Chorismate mutase type II JS608_03350 PF11009 Protein of unknown function (DUF2847) JS608_03351 PF12732 YtxH-like protein JS608_03352 PF06103 Bacterial protein of unknown function (DUF948) JS608_03353 PF01225 Mur ligase family, catalytic domain JS608_03353 PF02875 Mur ligase family, glutamate ligase domain JS608_03353 PF08245 Mur ligase middle domain JS608_03354 PF17854 FtsK alpha domain JS608_03354 PF09397 Ftsk gamma domain JS608_03354 PF01580 FtsK/SpoIIIE family JS608_03355 PF01588 Putative tRNA binding domain JS608_03355 PF14794 Domain of unknown function (DUF4479) JS608_03356 PF07285 Protein of unknown function (DUF1444) JS608_03357 PF00085 Thioredoxin JS608_03358 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ JS608_03359 PF05343 M42 glutamyl aminopeptidase JS608_03360 PF03413 Peptidase propeptide and YPEB domain JS608_03361 PF00390 Malic enzyme, N-terminal domain JS608_03361 PF03949 Malic enzyme, NAD binding domain JS608_03362 PF00753 Metallo-beta-lactamase superfamily JS608_03363 PF02390 Putative methyltransferase JS608_03364 PF14165 YtzH-like protein JS608_03365 PF01636 Phosphotransferase enzyme family JS608_03366 PF00781 Diacylglycerol kinase catalytic domain JS608_03369 PF00291 Pyridoxal-phosphate dependent enzyme JS608_03370 PF01546 Peptidase family M20/M25/M40 JS608_03371 PF00860 Permease family JS608_03372 PF05975 Bacterial ABC transporter protein EcsB JS608_03373 PF00005 ABC transporter JS608_03374 PF08220 DeoR-like helix-turn-helix domain JS608_03375 PF00849 RNA pseudouridylate synthase JS608_03375 PF01479 S4 domain JS608_03376 PF01943 Polysaccharide biosynthesis protein JS608_03376 PF14667 Polysaccharide biosynthesis C-terminal domain JS608_03378 PF02028 BCCT, betaine/carnitine/choline family transporter JS608_03379 PF10957 Sporulation protein Cse60 JS608_03380 PF00356 Bacterial regulatory proteins, lacI family JS608_03381 PF01547 Bacterial extracellular solute-binding protein JS608_03382 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03383 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03384 PF02056 Family 4 glycosyl hydrolase JS608_03384 PF11975 Family 4 glycosyl hydrolase C-terminal domain JS608_03386 PF00581 Rhodanese-like domain JS608_03387 PF08264 Anticodon-binding domain of tRNA JS608_03387 PF00133 tRNA synthetases class I (I, L, M and V) JS608_03387 PF09334 tRNA synthetases class I (M) JS608_03387 PF13603 Leucyl-tRNA synthetase, Domain 2 JS608_03388 PF14074 Protein of unknown function (DUF4257) JS608_03389 PF01740 STAS domain JS608_03389 PF13426 PAS domain JS608_03390 PF07690 Major Facilitator Superfamily JS608_03391 PF09529 Integral membrane protein (intg_mem_TP0381) JS608_03392 PF02687 FtsX-like permease family JS608_03393 PF00005 ABC transporter JS608_03394 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_03395 PF00486 Transcriptional regulatory protein, C terminal JS608_03395 PF00072 Response regulator receiver domain JS608_03396 PF02687 FtsX-like permease family JS608_03396 PF12704 MacB-like periplasmic core domain JS608_03397 PF00005 ABC transporter JS608_03401 PF00005 ABC transporter JS608_03402 PF00392 Bacterial regulatory proteins, gntR family JS608_03404 PF10732 Protein of unknown function (DUF2524) JS608_03405 PF01022 Bacterial regulatory protein, arsR family JS608_03407 PF04055 Radical SAM superfamily JS608_03407 PF16199 Radical_SAM C-terminal domain JS608_03408 PF06962 Putative rRNA methylase JS608_03410 PF03009 Glycerophosphoryl diester phosphodiesterase family JS608_03411 PF10776 Protein of unknown function (DUF2600) JS608_03412 PF12146 Serine aminopeptidase, S33 JS608_03414 PF00324 Amino acid permease JS608_03415 PF13537 Glutamine amidotransferase domain JS608_03415 PF00733 Asparagine synthase JS608_03416 PF02772 S-adenosylmethionine synthetase, central domain JS608_03416 PF02773 S-adenosylmethionine synthetase, C-terminal domain JS608_03416 PF00438 S-adenosylmethionine synthetase, N-terminal domain JS608_03417 PF01293 Phosphoenolpyruvate carboxykinase JS608_03418 PF10763 Protein of unknown function (DUF2584) JS608_03419 PF00326 Prolyl oligopeptidase family JS608_03421 PF00005 ABC transporter JS608_03422 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03423 PF00293 NUDIX domain JS608_03424 PF05105 Bacteriophage holin family JS608_03425 PF00210 Ferritin-like domain JS608_03427 PF13115 YtkA-like JS608_03428 PF02664 S-Ribosylhomocysteinase (LuxS) JS608_03429 PF01809 Putative membrane protein insertion efficiency factor JS608_03430 PF00484 Carbonic anhydrase JS608_03431 PF01197 Ribosomal protein L31 JS608_03432 PF01654 Cytochrome bd terminal oxidase subunit I JS608_03433 PF02322 Cytochrome bd terminal oxidase subunit II JS608_03434 PF07561 Domain of Unknown Function (DUF1540) JS608_03436 PF00501 AMP-binding enzyme JS608_03436 PF13193 AMP-binding enzyme C-terminal domain JS608_03437 PF00378 Enoyl-CoA hydratase/isomerase JS608_03438 PF00561 alpha/beta hydrolase fold JS608_03439 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JS608_03439 PF16582 Middle domain of thiamine pyrophosphate JS608_03439 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JS608_03440 PF00425 chorismate binding enzyme JS608_03441 PF01258 Prokaryotic dksA/traR C4-type zinc finger JS608_03442 PF03073 TspO/MBR family JS608_03467 PF09515 Thiamine transporter protein (Thia_YuaJ) JS608_03468 PF01145 SPFH domain / Band 7 family JS608_03468 PF15975 Flotillin JS608_03470 PF12867 DinB superfamily JS608_03472 PF00465 Iron-containing alcohol dehydrogenase JS608_03473 PF00171 Aldehyde dehydrogenase family JS608_03475 PF17735 Biofilm surface layer A JS608_03476 PF02080 TrkA-C domain JS608_03476 PF02254 TrkA-N domain JS608_03477 PF13457 GW (Gly-Tryp) dipeptide domain JS608_03477 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JS608_03478 PF00970 Oxidoreductase FAD-binding domain JS608_03478 PF00042 Globin JS608_03478 PF00175 Oxidoreductase NAD-binding domain JS608_03482 PF02673 Bacitracin resistance protein BacA JS608_03483 PF01594 AI-2E family transporter JS608_03484 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JS608_03484 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JS608_03485 PF01965 DJ-1/PfpI family JS608_03486 PF00672 HAMP domain JS608_03486 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JS608_03486 PF02743 Cache domain JS608_03487 PF02743 Cache domain JS608_03487 PF00672 HAMP domain JS608_03487 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JS608_03488 PF00672 HAMP domain JS608_03488 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JS608_03488 PF02743 Cache domain JS608_03489 PF02743 Cache domain JS608_03489 PF00672 HAMP domain JS608_03489 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JS608_03492 PF03060 Nitronate monooxygenase JS608_03493 PF01894 Uncharacterised protein family UPF0047 JS608_03494 PF16657 Maltogenic Amylase, C-terminal domain JS608_03494 PF00128 Alpha amylase, catalytic domain JS608_03495 PF00571 CBS domain JS608_03495 PF03471 Transporter associated domain JS608_03495 PF01595 Cyclin M transmembrane N-terminal domain JS608_03496 PF04298 Putative neutral zinc metallopeptidase JS608_03498 PF11458 Membrane-integrating protein Mistic JS608_03499 PF07885 Ion channel JS608_03499 PF02254 TrkA-N domain JS608_03500 PF08868 YugN-like family JS608_03502 PF00342 Phosphoglucose isomerase JS608_03503 PF03358 NADPH-dependent FMN reductase JS608_03504 PF00857 Isochorismatase family JS608_03505 PF00465 Iron-containing alcohol dehydrogenase JS608_03506 PF00465 Iron-containing alcohol dehydrogenase JS608_03507 PF04070 Domain of unknown function (DUF378) JS608_03508 PF00575 S1 RNA binding domain JS608_03509 PF00155 Aminotransferase class I and II JS608_03510 PF01037 Lrp/AsnC ligand binding domain JS608_03511 PF00561 alpha/beta hydrolase fold JS608_03511 PF08386 TAP-like protein JS608_03512 PF08958 Domain of unknown function (DUF1871) JS608_03513 PF00155 Aminotransferase class I and II JS608_03514 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_03514 PF00512 His Kinase A (phospho-acceptor) domain JS608_03515 PF08810 Kinase associated protein B JS608_03516 PF00929 Exonuclease JS608_03517 PF07690 Major Facilitator Superfamily JS608_03518 PF00905 Penicillin binding protein transpeptidase domain JS608_03518 PF00912 Transglycosylase JS608_03519 PF04134 Protein of unknown function, DUF393 JS608_03520 PF17328 Family of unknown function (DUF5366) JS608_03521 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_03521 PF00989 PAS fold JS608_03521 PF17203 Single cache domain 3 JS608_03521 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JS608_03522 PF00072 Response regulator receiver domain JS608_03523 PF02608 ABC transporter substrate-binding protein PnrA-like JS608_03524 PF00005 ABC transporter JS608_03525 PF02653 Branched-chain amino acid transport system / permease component JS608_03526 PF02653 Branched-chain amino acid transport system / permease component JS608_03528 PF13244 Domain of unknown function (DUF4040) JS608_03528 PF00361 Proton-conducting membrane transporter JS608_03528 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JS608_03529 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JS608_03530 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JS608_03531 PF00361 Proton-conducting membrane transporter JS608_03532 PF01899 Na+/H+ ion antiporter subunit JS608_03533 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JS608_03534 PF03334 Na+/H+ antiporter subunit JS608_03535 PF03061 Thioesterase superfamily JS608_03536 PF00196 Bacterial regulatory proteins, luxR family JS608_03536 PF00072 Response regulator receiver domain JS608_03537 PF07730 Histidine kinase JS608_03537 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_03538 PF05952 Bacillus competence pheromone ComX JS608_03539 PF00348 Polyprenyl synthetase JS608_03540 PF08181 DegQ (SacQ) family JS608_03543 PF00563 EAL domain JS608_03543 PF08668 HDOD domain JS608_03544 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JS608_03544 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JS608_03544 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JS608_03545 PF00857 Isochorismatase family JS608_03546 PF07997 Protein of unknown function (DUF1694) JS608_03547 PF14166 YueH-like protein JS608_03548 PF10676 Spore germination protein gerPA/gerPF JS608_03549 PF01594 AI-2E family transporter JS608_03550 PF10842 Protein of unknown function (DUF2642) JS608_03551 PF01966 HD domain JS608_03552 PF00106 short chain dehydrogenase JS608_03553 PF17355 Family of unknown function (DUF5383) JS608_03555 PF01580 FtsK/SpoIIIE family JS608_03555 PF12538 DNA transporter JS608_03556 PF10140 WXG100 protein secretion system (Wss), protein YukC JS608_03557 PF08817 WXG100 protein secretion system (Wss), protein YukD JS608_03558 PF06013 Proteins of 100 residues with WXG JS608_03559 PF06018 CodY GAF-like domain JS608_03559 PF17853 GGDEF-like domain JS608_03559 PF13556 PucR C-terminal helix-turn-helix domain JS608_03560 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JS608_03560 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JS608_03561 PF10042 Uncharacterized conserved protein (DUF2278) JS608_03562 PF03621 MbtH-like protein JS608_03563 PF00975 Thioesterase domain JS608_03563 PF00668 Condensation domain JS608_03563 PF00550 Phosphopantetheine attachment site JS608_03563 PF00501 AMP-binding enzyme JS608_03563 PF13193 AMP-binding enzyme C-terminal domain JS608_03564 PF00857 Isochorismatase family JS608_03564 PF00550 Phosphopantetheine attachment site JS608_03565 PF00501 AMP-binding enzyme JS608_03565 PF13193 AMP-binding enzyme C-terminal domain JS608_03566 PF00425 chorismate binding enzyme JS608_03567 PF00106 short chain dehydrogenase JS608_03568 PF00756 Putative esterase JS608_03569 PF00174 Oxidoreductase molybdopterin binding domain JS608_03570 PF02632 BioY family JS608_03571 PF03553 Na+/H+ antiporter family JS608_03571 PF13726 Na+-H+ antiporter family JS608_03572 PF00883 Cytosol aminopeptidase family, catalytic domain JS608_03572 PF02789 Cytosol aminopeptidase family, N-terminal domain JS608_03573 PF02681 Divergent PAP2 family JS608_03574 PF06725 3D domain JS608_03575 PF14068 Putative membrane protein JS608_03576 PF07992 Pyridine nucleotide-disulphide oxidoreductase JS608_03577 PF07992 Pyridine nucleotide-disulphide oxidoreductase JS608_03579 PF00478 IMP dehydrogenase / GMP reductase domain JS608_03582 PF00005 ABC transporter JS608_03584 PF09221 Bacteriocin class IId cyclical uberolysin-like JS608_03587 PF00106 short chain dehydrogenase JS608_03588 PF01521 Iron-sulphur cluster biosynthesis JS608_03589 PF01678 Diaminopimelate epimerase JS608_03590 PF01773 Na+ dependent nucleoside transporter N-terminus JS608_03590 PF07662 Na+ dependent nucleoside transporter C-terminus JS608_03591 PF07293 Protein of unknown function (DUF1450) JS608_03592 PF07992 Pyridine nucleotide-disulphide oxidoreductase JS608_03593 PF07315 Protein of unknown function (DUF1462) JS608_03594 PF01106 NifU-like domain JS608_03595 PF07676 WD40-like Beta Propeller Repeat JS608_03595 PF00326 Prolyl oligopeptidase family JS608_03596 PF00288 GHMP kinases N terminal domain JS608_03596 PF08544 GHMP kinases C terminal JS608_03597 PF00291 Pyridoxal-phosphate dependent enzyme JS608_03598 PF01842 ACT domain JS608_03598 PF00742 Homoserine dehydrogenase JS608_03598 PF03447 Homoserine dehydrogenase, NAD binding domain JS608_03600 PF04608 Phosphatidylglycerophosphatase A JS608_03601 PF13344 Haloacid dehalogenase-like hydrolase JS608_03602 PF01934 Protein of unknown function DUF86 JS608_03603 PF06265 Protein of unknown function (DUF1027) JS608_03604 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JS608_03604 PF04055 Radical SAM superfamily JS608_03605 PF01551 Peptidase family M23 JS608_03606 PF09560 Sporulation protein YunB (Spo_YunB) JS608_03607 PF02872 5'-nucleotidase, C-terminal domain JS608_03608 PF01925 Sulfite exporter TauE/SafE JS608_03609 PF01904 Protein of unknown function DUF72 JS608_03611 PF01979 Amidohydrolase family JS608_03612 PF17853 GGDEF-like domain JS608_03612 PF13556 PucR C-terminal helix-turn-helix domain JS608_03612 PF07905 Purine catabolism regulatory protein-like family JS608_03616 PF07690 Major Facilitator Superfamily JS608_03617 PF00266 Aminotransferase class-V JS608_03618 PF01546 Peptidase family M20/M25/M40 JS608_03619 PF04231 Endonuclease I JS608_03620 PF17912 MalK OB fold domain JS608_03620 PF03459 TOBE domain JS608_03620 PF00005 ABC transporter JS608_03621 PF00392 Bacterial regulatory proteins, gntR family JS608_03621 PF07702 UTRA domain JS608_03622 PF00294 pfkB family carbohydrate kinase JS608_03623 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03624 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03625 PF01547 Bacterial extracellular solute-binding protein JS608_03626 PF01380 SIS domain JS608_03627 PF13411 MerR HTH family regulatory protein JS608_03628 PF07853 Protein of unknown function (DUF1648) JS608_03629 PF01541 GIY-YIG catalytic domain JS608_03630 PF01266 FAD dependent oxidoreductase JS608_03631 PF01374 Glycosyl hydrolase family 46 JS608_03632 PF01458 Uncharacterized protein family (UPF0051) JS608_03633 PF01592 NifU-like N terminal domain JS608_03634 PF00266 Aminotransferase class-V JS608_03635 PF01458 Uncharacterized protein family (UPF0051) JS608_03636 PF00005 ABC transporter JS608_03637 PF02627 Carboxymuconolactone decarboxylase family JS608_03638 PF03180 NLPA lipoprotein JS608_03639 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03640 PF00005 ABC transporter JS608_03640 PF09383 NIL domain JS608_03641 PF02036 SCP-2 sterol transfer family JS608_03642 PF00085 Thioredoxin JS608_03643 PF01751 Toprim domain JS608_03644 PF10830 Protein of unknown function (DUF2553) JS608_03645 PF01597 Glycine cleavage H-protein JS608_03646 PF03960 ArsC family JS608_03647 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JS608_03647 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JS608_03647 PF02770 Acyl-CoA dehydrogenase, middle domain JS608_03648 PF02803 Thiolase, C-terminal domain JS608_03648 PF00108 Thiolase, N-terminal domain JS608_03649 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JS608_03649 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JS608_03649 PF00378 Enoyl-CoA hydratase/isomerase JS608_03650 PF01619 Proline dehydrogenase JS608_03651 PF07690 Major Facilitator Superfamily JS608_03653 PF07875 Coat F domain JS608_03654 PF01047 MarR family JS608_03655 PF07690 Major Facilitator Superfamily JS608_03656 PF03466 LysR substrate binding domain JS608_03656 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_03657 PF06314 Acetoacetate decarboxylase (ADC) JS608_03659 PF10835 Protein of unknown function (DUF2573) JS608_03660 PF00005 ABC transporter JS608_03661 PF14039 YusW-like protein JS608_03663 PF00106 short chain dehydrogenase JS608_03664 PF00210 Ferritin-like domain JS608_03665 PF13180 PDZ domain JS608_03666 PF00072 Response regulator receiver domain JS608_03666 PF00486 Transcriptional regulatory protein, C terminal JS608_03667 PF00672 HAMP domain JS608_03667 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_03667 PF00512 His Kinase A (phospho-acceptor) domain JS608_03669 PF00440 Bacterial regulatory proteins, tetR family JS608_03670 PF10415 Fumarase C C-terminus JS608_03670 PF00206 Lyase JS608_03671 PF13113 Protein of unknown function (DUF3970) JS608_03672 PF03323 Bacillus/Clostridium GerA spore germination protein JS608_03673 PF03845 Spore germination protein JS608_03674 PF05504 Spore germination B3/ GerAC like, C-terminal JS608_03675 PF00196 Bacterial regulatory proteins, luxR family JS608_03675 PF00072 Response regulator receiver domain JS608_03676 PF00672 HAMP domain JS608_03676 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_03676 PF07730 Histidine kinase JS608_03677 PF09922 Cell wall-active antibiotics response 4TMS YvqF JS608_03678 PF13349 Putative adhesin JS608_03679 PF04012 PspA/IM30 family JS608_03681 PF07690 Major Facilitator Superfamily JS608_03682 PF01923 Cobalamin adenosyltransferase JS608_03683 PF00005 ABC transporter JS608_03684 PF01032 FecCD transport family JS608_03685 PF01497 Periplasmic binding protein JS608_03686 PF00106 short chain dehydrogenase JS608_03687 PF08450 SMP-30/Gluconolactonase/LRE-like region JS608_03688 PF00512 His Kinase A (phospho-acceptor) domain JS608_03688 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_03689 PF00486 Transcriptional regulatory protein, C terminal JS608_03689 PF00072 Response regulator receiver domain JS608_03690 PF04545 Sigma-70, region 4 JS608_03691 PF12841 YvrJ protein family JS608_03692 PF00190 Cupin JS608_03693 PF14184 Regulatory protein YrvL JS608_03694 PF00005 ABC transporter JS608_03695 PF01032 FecCD transport family JS608_03696 PF01032 FecCD transport family JS608_03697 PF01497 Periplasmic binding protein JS608_03698 PF04072 Leucine carboxyl methyltransferase JS608_03699 PF13520 Amino acid permease JS608_03700 PF09575 Small spore protein J (Spore_SspJ) JS608_03701 PF04307 LexA-binding, inner membrane-associated putative hydrolase JS608_03702 PF00884 Sulfatase JS608_03703 PF12727 PBP superfamily domain JS608_03703 PF12728 Helix-turn-helix domain JS608_03705 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03706 PF00072 Response regulator receiver domain JS608_03706 PF00196 Bacterial regulatory proteins, luxR family JS608_03707 PF00672 HAMP domain JS608_03707 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_03707 PF07730 Histidine kinase JS608_03707 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JS608_03708 PF00005 ABC transporter JS608_03711 PF00248 Aldo/keto reductase family JS608_03713 PF00999 Sodium/hydrogen exchanger family JS608_03714 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JS608_03714 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JS608_03715 PF00258 Flavodoxin JS608_03715 PF00175 Oxidoreductase NAD-binding domain JS608_03715 PF00667 FAD binding domain JS608_03716 PF13538 UvrD-like helicase C-terminal domain JS608_03717 PF03458 UPF0126 domain JS608_03719 PF02600 Disulfide bond formation protein DsbB JS608_03720 PF13462 Thioredoxin JS608_03721 PF00403 Heavy-metal-associated domain JS608_03722 PF00403 Heavy-metal-associated domain JS608_03723 PF00403 Heavy-metal-associated domain JS608_03724 PF02583 Metal-sensitive transcriptional repressor JS608_03725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JS608_03725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JS608_03726 PF02525 Flavodoxin-like fold JS608_03727 PF00296 Luciferase-like monooxygenase JS608_03728 PF00462 Glutaredoxin JS608_03729 PF00296 Luciferase-like monooxygenase JS608_03730 PF00005 ABC transporter JS608_03731 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03732 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03733 PF00497 Bacterial extracellular solute-binding proteins, family 3 JS608_03734 PF00497 Bacterial extracellular solute-binding proteins, family 3 JS608_03735 PF00583 Acetyltransferase (GNAT) family JS608_03736 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_03736 PF03466 LysR substrate binding domain JS608_03737 PF00106 short chain dehydrogenase JS608_03738 PF01337 Barstar (barnase inhibitor) JS608_03740 PF01668 SmpB protein JS608_03741 PF17876 Cold shock domain JS608_03741 PF08206 Ribonuclease B OB domain JS608_03741 PF00773 RNB domain JS608_03741 PF00575 S1 RNA binding domain JS608_03742 PF00575 S1 RNA binding domain JS608_03742 PF08206 Ribonuclease B OB domain JS608_03742 PF00773 RNB domain JS608_03742 PF17876 Cold shock domain JS608_03743 PF12146 Serine aminopeptidase, S33 JS608_03744 PF03840 Preprotein translocase SecG subunit JS608_03745 PF01381 Helix-turn-helix JS608_03748 PF01638 HxlR-like helix-turn-helix JS608_03749 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_03749 PF00512 His Kinase A (phospho-acceptor) domain JS608_03750 PF00072 Response regulator receiver domain JS608_03750 PF00486 Transcriptional regulatory protein, C terminal JS608_03753 PF00005 ABC transporter JS608_03754 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03755 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JS608_03756 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03757 PF00005 ABC transporter JS608_03757 PF00571 CBS domain JS608_03758 PF12802 MarR family JS608_03759 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03760 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JS608_03761 PF00528 Binding-protein-dependent transport system inner membrane component JS608_03762 PF00571 CBS domain JS608_03762 PF00005 ABC transporter JS608_03763 PF12802 MarR family JS608_03764 PF01914 MarC family integral membrane protein JS608_03766 PF13240 zinc-ribbon domain JS608_03767 PF00583 Acetyltransferase (GNAT) family JS608_03770 PF02585 GlcNAc-PI de-N-acetylase JS608_03773 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JS608_03774 PF01370 NAD dependent epimerase/dehydratase family JS608_03775 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JS608_03776 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JS608_03776 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JS608_03776 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JS608_03777 PF04389 Peptidase family M28 JS608_03777 PF02225 PA domain JS608_03778 PF00113 Enolase, C-terminal TIM barrel domain JS608_03778 PF03952 Enolase, N-terminal domain JS608_03779 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JS608_03779 PF01676 Metalloenzyme superfamily JS608_03780 PF00121 Triosephosphate isomerase JS608_03781 PF00162 Phosphoglycerate kinase JS608_03782 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JS608_03782 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JS608_03783 PF04198 Putative sugar-binding domain JS608_03785 PF00083 Sugar (and other) transporter JS608_03786 PF00392 Bacterial regulatory proteins, gntR family JS608_03787 PF00296 Luciferase-like monooxygenase JS608_03789 PF03466 LysR substrate binding domain JS608_03789 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_03790 PF00892 EamA-like transporter family JS608_03791 PF00324 Amino acid permease JS608_03793 PF01418 Helix-turn-helix domain, rpiR family JS608_03793 PF01380 SIS domain JS608_03794 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JS608_03794 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JS608_03795 PF02447 GntP family permease JS608_03796 PF02589 LUD domain JS608_03797 PF11870 Domain of unknown function (DUF3390) JS608_03797 PF02589 LUD domain JS608_03797 PF13183 4Fe-4S dicluster domain JS608_03798 PF02754 Cysteine-rich domain JS608_03799 PF00155 Aminotransferase class I and II JS608_03800 PF00392 Bacterial regulatory proteins, gntR family JS608_03800 PF07729 FCD domain JS608_03801 PF02652 L-lactate permease JS608_03802 PF04552 Sigma-54, DNA binding domain JS608_03802 PF00309 Sigma-54 factor, Activator interacting domain (AID) JS608_03802 PF04963 Sigma-54 factor, core binding domain JS608_03803 PF09628 YvfG protein JS608_03804 PF04230 Polysaccharide pyruvyl transferase JS608_03805 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JS608_03806 PF17836 PglD N-terminal domain JS608_03806 PF00132 Bacterial transferase hexapeptide (six repeats) JS608_03807 PF02397 Bacterial sugar transferase JS608_03808 PF01943 Polysaccharide biosynthesis protein JS608_03808 PF14667 Polysaccharide biosynthesis C-terminal domain JS608_03809 PF00535 Glycosyl transferase family 2 JS608_03810 PF04230 Polysaccharide pyruvyl transferase JS608_03811 PF00535 Glycosyl transferase family 2 JS608_03813 PF13439 Glycosyltransferase Family 4 JS608_03813 PF00534 Glycosyl transferases group 1 JS608_03814 PF00534 Glycosyl transferases group 1 JS608_03814 PF13439 Glycosyltransferase Family 4 JS608_03815 PF00535 Glycosyl transferase family 2 JS608_03816 PF13439 Glycosyltransferase Family 4 JS608_03816 PF00534 Glycosyl transferases group 1 JS608_03817 PF02719 Polysaccharide biosynthesis protein JS608_03818 PF13614 AAA domain JS608_03819 PF02706 Chain length determinant protein JS608_03820 PF01381 Helix-turn-helix JS608_03820 PF08671 Anti-repressor SinI JS608_03821 PF00135 Carboxylesterase family JS608_03823 PF01872 RibD C-terminal domain JS608_03825 PF00583 Acetyltransferase (GNAT) family JS608_03826 PF05870 Phenolic acid decarboxylase (PAD) JS608_03833 PF08244 Glycosyl hydrolases family 32 C terminal JS608_03833 PF00251 Glycosyl hydrolases family 32 N-terminal domain JS608_03834 PF01306 LacY proton/sugar symporter JS608_03835 PF00356 Bacterial regulatory proteins, lacI family JS608_03836 PF00574 Clp protease JS608_03837 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_03837 PF03466 LysR substrate binding domain JS608_03839 PF00083 Sugar (and other) transporter JS608_03841 PF03641 Possible lysine decarboxylase JS608_03842 PF03819 MazG nucleotide pyrophosphohydrolase domain JS608_03843 PF00916 Sulfate permease family JS608_03843 PF01740 STAS domain JS608_03844 PF00484 Carbonic anhydrase JS608_03845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JS608_03845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JS608_03846 PF00545 ribonuclease JS608_03847 PF00797 N-acetyltransferase JS608_03848 PF00381 PTS HPr component phosphorylation site JS608_03849 PF02650 WhiA C-terminal HTH domain JS608_03849 PF14527 WhiA LAGLIDADG-like domain JS608_03849 PF10298 WhiA N-terminal LAGLIDADG-like domain JS608_03850 PF01933 Uncharacterised protein family UPF0052 JS608_03851 PF03668 P-loop ATPase protein family JS608_03852 PF00293 NUDIX domain JS608_03853 PF07992 Pyridine nucleotide-disulphide oxidoreductase JS608_03854 PF00877 NlpC/P60 family JS608_03856 PF00672 HAMP domain JS608_03856 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_03856 PF18698 Histidine kinase sensor domain JS608_03856 PF00512 His Kinase A (phospho-acceptor) domain JS608_03856 PF00989 PAS fold JS608_03857 PF00486 Transcriptional regulatory protein, C terminal JS608_03857 PF00072 Response regulator receiver domain JS608_03859 PF00664 ABC transporter transmembrane region JS608_03859 PF00005 ABC transporter JS608_03860 PF01502 Phosphoribosyl-AMP cyclohydrolase JS608_03860 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JS608_03861 PF00977 Histidine biosynthesis protein JS608_03862 PF00977 Histidine biosynthesis protein JS608_03863 PF00117 Glutamine amidotransferase class-I JS608_03864 PF00475 Imidazoleglycerol-phosphate dehydratase JS608_03865 PF00815 Histidinol dehydrogenase JS608_03866 PF01634 ATP phosphoribosyltransferase JS608_03867 PF13393 Histidyl-tRNA synthetase JS608_03868 PF13529 Peptidase_C39 like family JS608_03869 PF14602 Hexapeptide repeat of succinyl-transferase JS608_03870 PF13419 Haloacid dehalogenase-like hydrolase JS608_03871 PF01790 Prolipoprotein diacylglyceryl transferase JS608_03872 PF07475 HPr Serine kinase C-terminal domain JS608_03872 PF02603 HPr Serine kinase N terminus JS608_03873 PF01979 Amidohydrolase family JS608_03874 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JS608_03875 PF07702 UTRA domain JS608_03875 PF00392 Bacterial regulatory proteins, gntR family JS608_03876 PF00440 Bacterial regulatory proteins, tetR family JS608_03878 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JS608_03879 PF04024 PspC domain JS608_03880 PF13349 Putative adhesin JS608_03883 PF17760 UvrA interaction domain JS608_03883 PF00005 ABC transporter JS608_03883 PF17755 UvrA DNA-binding domain JS608_03884 PF04851 Type III restriction enzyme, res subunit JS608_03884 PF02151 UvrB/uvrC motif JS608_03884 PF12344 Ultra-violet resistance protein B JS608_03884 PF17757 UvrB interaction domain JS608_03884 PF00271 Helicase conserved C-terminal domain JS608_03885 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) JS608_03886 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JS608_03886 PF00391 PEP-utilising enzyme, mobile domain JS608_03887 PF00440 Bacterial regulatory proteins, tetR family JS608_03888 PF07690 Major Facilitator Superfamily JS608_03890 PF17820 PDZ domain JS608_03891 PF17423 Swarming motility protein JS608_03892 PF01471 Putative peptidoglycan binding domain JS608_03892 PF17820 PDZ domain JS608_03892 PF03572 Peptidase family S41 JS608_03893 PF13229 Right handed beta helix region JS608_03894 PF02687 FtsX-like permease family JS608_03894 PF18075 FtsX extracellular domain JS608_03895 PF00005 ABC transporter JS608_03896 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JS608_03897 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JS608_03897 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JS608_03898 PF03462 PCRF domain JS608_03898 PF00472 RF-1 domain JS608_03899 PF02810 SEC-C motif JS608_03899 PF01043 SecA preprotein cross-linking domain JS608_03899 PF07516 SecA Wing and Scaffold domain JS608_03899 PF07517 SecA DEAD-like domain JS608_03900 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JS608_03900 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JS608_03903 PF02561 Flagellar protein FliS JS608_03904 PF07196 Flagellin hook IN motif JS608_03904 PF07195 Flagellar hook-associated protein 2 C-terminus JS608_03904 PF02465 Flagellar hook-associated protein 2 N-terminus JS608_03905 PF00700 Bacterial flagellin C-terminal helical region JS608_03905 PF00669 Bacterial flagellin N-terminal helical region JS608_03906 PF02599 Global regulator protein family JS608_03907 PF02623 FliW protein JS608_03909 PF00700 Bacterial flagellin C-terminal helical region JS608_03909 PF00669 Bacterial flagellin N-terminal helical region JS608_03910 PF00460 Flagella basal body rod protein JS608_03910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JS608_03911 PF05130 FlgN protein JS608_03912 PF04316 Anti-sigma-28 factor, FlgM JS608_03915 PF10719 Late competence development protein ComFB JS608_03916 PF04851 Type III restriction enzyme, res subunit JS608_03916 PF00271 Helicase conserved C-terminal domain JS608_03917 PF02645 Uncharacterised protein, DegV family COG1307 JS608_03918 PF00072 Response regulator receiver domain JS608_03918 PF00196 Bacterial regulatory proteins, luxR family JS608_03919 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JS608_03919 PF07730 Histidine kinase JS608_03919 PF05384 Sensor protein DegS JS608_03920 PF09186 Domain of unknown function (DUF1949) JS608_03920 PF01205 Uncharacterized protein family UPF0029 JS608_03921 PF03816 Cell envelope-related transcriptional attenuator domain JS608_03922 PF00953 Glycosyl transferase family 4 JS608_03924 PF00535 Glycosyl transferase family 2 JS608_03925 PF02706 Chain length determinant protein JS608_03926 PF04932 O-Antigen ligase JS608_03927 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JS608_03927 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JS608_03927 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JS608_03928 PF13439 Glycosyltransferase Family 4 JS608_03928 PF00534 Glycosyl transferases group 1 JS608_03929 PF01943 Polysaccharide biosynthesis protein JS608_03929 PF14667 Polysaccharide biosynthesis C-terminal domain JS608_03930 PF02397 Bacterial sugar transferase JS608_03931 PF01520 N-acetylmuramoyl-L-alanine amidase JS608_03931 PF04122 Putative cell wall binding repeat 2 JS608_03932 PF04122 Putative cell wall binding repeat 2 JS608_03932 PF08486 Stage II sporulation protein JS608_03934 PF03816 Cell envelope-related transcriptional attenuator domain JS608_03935 PF02350 UDP-N-acetylglucosamine 2-epimerase JS608_03936 PF00483 Nucleotidyl transferase JS608_03937 PF00005 ABC transporter JS608_03938 PF01061 ABC-2 type transporter JS608_03939 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JS608_03940 PF00535 Glycosyl transferase family 2 JS608_03940 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 JS608_03941 PF01467 Cytidylyltransferase-like JS608_03942 PF03808 Glycosyl transferase WecB/TagA/CpsF family JS608_03943 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JS608_03944 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JS608_03944 PF08239 Bacterial SH3 domain JS608_03944 PF05036 Sporulation related domain JS608_03945 PF01238 Phosphomannose isomerase type I JS608_03946 PF03323 Bacillus/Clostridium GerA spore germination protein JS608_03947 PF03845 Spore germination protein JS608_03948 PF05504 Spore germination B3/ GerAC like, C-terminal JS608_03950 PF00083 Sugar (and other) transporter JS608_03951 PF03816 Cell envelope-related transcriptional attenuator domain JS608_03953 PF04791 LMBR1-like membrane protein JS608_03954 PF00877 NlpC/P60 family JS608_03956 PF09587 Bacterial capsule synthesis protein PGA_cap JS608_03957 PF14102 Capsule biosynthesis CapC JS608_03958 PF08245 Mur ligase middle domain JS608_03959 PF03323 Bacillus/Clostridium GerA spore germination protein JS608_03960 PF03845 Spore germination protein JS608_03962 PF00356 Bacterial regulatory proteins, lacI family JS608_03963 PF00294 pfkB family carbohydrate kinase JS608_03964 PF05025 RbsD / FucU transport protein family JS608_03965 PF00005 ABC transporter JS608_03966 PF02653 Branched-chain amino acid transport system / permease component JS608_03967 PF13407 Periplasmic binding protein domain JS608_03968 PF08239 Bacterial SH3 domain JS608_03969 PF02525 Flavodoxin-like fold JS608_03970 PF03306 Alpha-acetolactate decarboxylase JS608_03971 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JS608_03971 PF00205 Thiamine pyrophosphate enzyme, central domain JS608_03971 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JS608_03972 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_03972 PF03466 LysR substrate binding domain JS608_03974 PF02040 Arsenical pump membrane protein JS608_03977 PF08757 CotH kinase protein JS608_03979 PF01613 Flavin reductase like domain JS608_03982 PF01037 Lrp/AsnC ligand binding domain JS608_03982 PF13404 AsnC-type helix-turn-helix domain JS608_03983 PF02417 Chromate transporter JS608_03984 PF02417 Chromate transporter JS608_03986 PF03358 NADPH-dependent FMN reductase JS608_03987 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JS608_03987 PF03466 LysR substrate binding domain JS608_03988 PF04493 Endonuclease V JS608_03991 PF04740 LXG domain of WXG superfamily JS608_03991 PF14449 Pre-toxin TG JS608_03991 PF14431 YwqJ-like deaminase JS608_03993 PF16888 Domain of unknown function (DUF5082) JS608_03995 PF09234 Domain of unknown function (DUF1963) JS608_03996 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JS608_03996 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JS608_03996 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JS608_03998 PF13614 AAA domain JS608_03999 PF13807 G-rich domain on putative tyrosine kinase JS608_03999 PF02706 Chain length determinant protein JS608_04001 PF04434 SWIM zinc finger JS608_04002 PF00271 Helicase conserved C-terminal domain JS608_04002 PF00176 SNF2 family N-terminal domain JS608_04002 PF12419 SNF2 Helicase protein JS608_04004 PF00455 DeoR C terminal sensor domain JS608_04004 PF08220 DeoR-like helix-turn-helix domain JS608_04005 PF00436 Single-strand binding protein family JS608_04007 PF14183 YwpF-like protein JS608_04008 PF01741 Large-conductance mechanosensitive channel, MscL JS608_04009 PF07977 FabA-like domain JS608_04010 PF18801 response regulator aspartate phosphatase H, N terminal JS608_04011 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JS608_04011 PF00460 Flagella basal body rod protein JS608_04012 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JS608_04012 PF00460 Flagella basal body rod protein JS608_04014 PF12116 Stage III sporulation protein D JS608_04015 PF01047 MarR family JS608_04016 PF07690 Major Facilitator Superfamily JS608_04017 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JS608_04018 PF07690 Major Facilitator Superfamily JS608_04019 PF00857 Isochorismatase family JS608_04020 PF00909 Ammonium Transporter Family JS608_04021 PF00543 Nitrogen regulatory protein P-II JS608_04022 PF01098 Cell cycle protein JS608_04023 PF01569 PAP2 superfamily JS608_04024 PF04892 VanZ like family JS608_04025 PF01551 Peptidase family M23 JS608_04026 PF00583 Acetyltransferase (GNAT) family JS608_04027 PF17319 Family of unknown function (DUF5362) JS608_04028 PF17370 Family of unknown function (DUF5392) JS608_04029 PF13091 PLD-like domain JS608_04029 PF13396 Phospholipase_D-nuclease N-terminal JS608_04030 PF17319 Family of unknown function (DUF5362) JS608_04031 PF00457 Glycosyl hydrolases family 11 JS608_04033 PF02082 Transcriptional regulator JS608_04034 PF01979 Amidohydrolase family JS608_04034 PF00449 Urease alpha-subunit, N-terminal domain JS608_04036 PF00699 Urease beta subunit JS608_04037 PF00547 Urease, gamma subunit JS608_04038 PF05532 CsbD-like JS608_04040 PF17874 MalT-like TPR region JS608_04040 PF18801 response regulator aspartate phosphatase H, N terminal JS608_04041 PF04055 Radical SAM superfamily JS608_04041 PF06463 Molybdenum Cofactor Synthesis C JS608_04042 PF02634 FdhD/NarQ family JS608_04044 PF00092 von Willebrand factor type A domain JS608_04045 PF00092 von Willebrand factor type A domain JS608_04046 PF08486 Stage II sporulation protein JS608_04047 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JS608_04048 PF08680 TATA-box binding JS608_04049 PF06612 Protein of unknown function (DUF1146) JS608_04051 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JS608_04051 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JS608_04052 PF02874 ATP synthase alpha/beta family, beta-barrel domain JS608_04052 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JS608_04053 PF00231 ATP synthase JS608_04054 PF02874 ATP synthase alpha/beta family, beta-barrel domain JS608_04054 PF00306 ATP synthase alpha/beta chain, C terminal domain JS608_04054 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JS608_04055 PF00213 ATP synthase delta (OSCP) subunit JS608_04056 PF00430 ATP synthase B/B' CF(0) JS608_04057 PF00137 ATP synthase subunit C JS608_04058 PF00119 ATP synthase A chain JS608_04059 PF03899 ATP synthase I chain JS608_04061 PF00464 Serine hydroxymethyltransferase JS608_04062 PF04260 Protein of unknown function (DUF436) JS608_04063 PF02502 Ribose/Galactose Isomerase JS608_04064 PF01451 Low molecular weight phosphotyrosine protein phosphatase JS608_04065 PF02659 Putative manganese efflux pump JS608_04066 PF03481 Putative GTP-binding controlling metal-binding JS608_04066 PF01300 Telomere recombination JS608_04068 PF09551 Stage II sporulation protein R (spore_II_R) JS608_04069 PF17094 Uncharacterised protein family (UPF0715) JS608_04070 PF17247 Family of unknown function (DUF5316) JS608_04071 PF05175 Methyltransferase small domain JS608_04071 PF17827 PrmC N-terminal domain JS608_04072 PF00472 RF-1 domain JS608_04072 PF03462 PCRF domain JS608_04073 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JS608_04074 PF13411 MerR HTH family regulatory protein JS608_04075 PF03547 Membrane transport protein JS608_04076 PF00390 Malic enzyme, N-terminal domain JS608_04076 PF03949 Malic enzyme, NAD binding domain JS608_04077 PF00265 Thymidine kinase JS608_04080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JS608_04080 PF07498 Rho termination factor, N-terminal domain JS608_04080 PF07497 Rho termination factor, RNA-binding domain JS608_04082 PF01116 Fructose-bisphosphate aldolase class-II