locus-tag	class	description
JS608_00014	COG0698	ribose 5-phosphate isomerase
JS608_00015	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JS608_00017	COG0009	L-threonylcarbamoyladenylate synthase
JS608_00018	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JS608_00022	COG2890	protein-(glutamine-N5) methyltransferase activity
JS608_00023	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JS608_00024	COG0346	lactoylglutathione lyase activity
JS608_00025	COG0789	Transcriptional regulator
JS608_00026	COG0679	Auxin Efflux Carrier
JS608_00027	COG0281	malic enzyme
JS608_00030	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JS608_00031	COG1494	fructose-1,6-bisphosphatase
JS608_00034	COG0191	fructose-bisphosphate aldolase activity
JS608_00035	COG2204	response regulator
JS608_00036	COG4821	SIS domain
JS608_00039	COG2181	nitrate reductase activity
JS608_00039	COG0247	lactate metabolic process
JS608_00040	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JS608_00043	COG1132	(ABC) transporter
JS608_00044	COG1132	(ABC) transporter
JS608_00045	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JS608_00047	COG2181	nitrate reductase activity
JS608_00048	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JS608_00049	COG1140	nitrate reductase beta subunit
JS608_00050	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JS608_00051	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JS608_00053	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JS608_00054	COG2223	nitrite transmembrane transporter activity
JS608_00056	COG4506	Protein conserved in bacteria
JS608_00057	COG0457	Tetratricopeptide repeat
JS608_00065	COG0010	Belongs to the arginase family
JS608_00066	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
JS608_00067	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JS608_00070	COG1994	Peptidase M50
JS608_00071	COG1942	4-Oxalocrotonate Tautomerase
JS608_00072	COG1846	Transcriptional regulator
JS608_00073	COG0531	amino acid
JS608_00074	COG0531	amino acid
JS608_00075	COG3465	dGTPase activity
JS608_00076	COG1078	dGTPase activity
JS608_00079	COG1695	Transcriptional regulator
JS608_00081	COG1131	(ABC) transporter
JS608_00082	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JS608_00088	COG0583	DNA-binding transcription factor activity
JS608_00089	COG2855	membrane
JS608_00090	COG0280	phosphate acetyltransferase
JS608_00092	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_00093	COG0436	Aminotransferase
JS608_00099	COG2814	Major facilitator Superfamily
JS608_00100	COG2814	Major facilitator Superfamily
JS608_00101	COG0833	amino acid
JS608_00102	COG4187	Peptidase family M20/M25/M40
JS608_00103	COG1012	belongs to the aldehyde dehydrogenase family
JS608_00104	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JS608_00106	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
JS608_00107	COG1091	dTDP-4-dehydrorhamnose reductase activity
JS608_00108	COG1088	dTDP-glucose 4,6-dehydratase activity
JS608_00109	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JS608_00110	COG3980	spore coat polysaccharide biosynthesis protein
JS608_00111	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
JS608_00112	COG2089	acid synthase
JS608_00113	COG0456	acetyltransferase
JS608_00114	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JS608_00115	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JS608_00116	COG0463	Glycosyl transferase, family 2
JS608_00118	COG2363	Small membrane protein
JS608_00119	COG2233	PERMEase
JS608_00122	COG1216	Glycosyl transferase, family 2
JS608_00125	COG1695	Transcriptional regulator
JS608_00126	COG0351	phosphomethylpyrimidine kinase
JS608_00128	COG1621	beta-fructofuranosidase activity
JS608_00129	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JS608_00129	COG1263	PTS System
JS608_00130	COG3711	transcriptional antiterminator
JS608_00132	COG1404	Belongs to the peptidase S8 family
JS608_00133	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JS608_00134	COG0778	Nitroreductase
JS608_00135	COG0772	Belongs to the SEDS family
JS608_00136	COG0454	-acetyltransferase
JS608_00140	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JS608_00141	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JS608_00142	COG2261	transglycosylase associated protein
JS608_00143	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
JS608_00144	COG2246	polysaccharide biosynthetic process
JS608_00145	COG1309	transcriptional regulator
JS608_00149	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JS608_00150	COG2837	iron assimilation
JS608_00153	COG0583	DNA-binding transcription factor activity
JS608_00155	COG1346	cytolysis
JS608_00156	COG4895	conserved protein (DUF2196)
JS608_00157	COG0789	Transcriptional regulator
JS608_00158	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JS608_00159	COG0346	lactoylglutathione lyase activity
JS608_00160	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JS608_00161	COG1404	Belongs to the peptidase S8 family
JS608_00162	COG1442	glycosyl transferase family 8
JS608_00163	COG1846	Transcriptional regulator
JS608_00164	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JS608_00165	COG2357	RelA SpoT domain protein
JS608_00166	COG1575	Belongs to the MenA family. Type 1 subfamily
JS608_00169	COG1696	Membrane protein involved in D-alanine export
JS608_00171	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JS608_00172	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JS608_00173	COG1486	melibiose metabolic process
JS608_00174	COG1447	Phosphotransferase system cellobiose-specific component IIA
JS608_00175	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JS608_00176	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JS608_00177	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JS608_00177	COG3711	transcriptional antiterminator
JS608_00179	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JS608_00180	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JS608_00182	COG0640	Transcriptional regulator
JS608_00183	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JS608_00184	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JS608_00185	COG1447	Phosphotransferase system cellobiose-specific component IIA
JS608_00186	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JS608_00187	COG2723	6-phospho-beta-galactosidase activity
JS608_00188	COG1940	carbohydrate kinase activity
JS608_00189	COG1482	cell wall glycoprotein biosynthetic process
JS608_00191	COG0753	catalase activity
JS608_00192	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
JS608_00193	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JS608_00194	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JS608_00195	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JS608_00196	COG4988	ABC transporter
JS608_00197	COG1294	oxidase, subunit
JS608_00198	COG1271	oxidase subunit
JS608_00199	COG3493	citrate carrier protein
JS608_00200	COG0726	polysaccharide deacetylase
JS608_00201	COG3842	ATPase activity
JS608_00202	COG2508	Transcriptional regulator
JS608_00203	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JS608_00205	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JS608_00209	COG4894	glucomannan catabolic process
JS608_00210	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JS608_00211	COG0500	methyltransferase
JS608_00212	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JS608_00215	COG0753	catalase activity
JS608_00215	COG0693	protein deglycase activity
JS608_00216	COG2851	Citrate transporter
JS608_00217	COG2273	Hydrolase Family 16
JS608_00219	COG3711	transcriptional antiterminator
JS608_00220	COG3711	transcriptional antiterminator
JS608_00221	COG2270	Major facilitator Superfamily
JS608_00222	COG0513	Belongs to the DEAD box helicase family
JS608_00232	COG0697	spore germination
JS608_00233	COG0589	response to stress
JS608_00235	COG0494	nUDIX hydrolase
JS608_00236	COG3507	Belongs to the glycosyl hydrolase 43 family
JS608_00241	COG0010	Belongs to the arginase family
JS608_00242	COG0833	amino acid
JS608_00243	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
JS608_00244	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
JS608_00245	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JS608_00247	COG2390	Transcriptional regulator
JS608_00248	COG0561	phosphatase activity
JS608_00254	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JS608_00255	COG5294	Protein conserved in bacteria
JS608_00256	COG0577	efflux transmembrane transporter activity
JS608_00257	COG1136	(ABC) transporter
JS608_00258	COG2205	protein histidine kinase activity
JS608_00259	COG0745	RESPONSE REGULATOR receiver
JS608_00262	COG1082	Xylose isomerase domain protein TIM barrel
JS608_00264	COG2814	Major facilitator Superfamily
JS608_00270	COG1349	DNA-binding transcription factor activity
JS608_00271	COG0667	Aldo Keto reductase
JS608_00272	COG2814	Major facilitator Superfamily
JS608_00275	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_00276	COG2197	response regulator
JS608_00277	COG4585	Histidine kinase
JS608_00278	COG3239	Fatty acid desaturase
JS608_00279	COG1309	transcriptional regulator
JS608_00280	COG1012	belongs to the aldehyde dehydrogenase family
JS608_00281	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
JS608_00283	COG0640	Transcriptional regulator
JS608_00284	COG2814	Major facilitator Superfamily
JS608_00285	COG1714	RDD family
JS608_00287	COG0450	alkyl hydroperoxide reductase
JS608_00288	COG3634	alkyl hydroperoxide reductase activity
JS608_00289	COG1113	amino acid transport
JS608_00291	COG2080	2 iron, 2 sulfur cluster binding
JS608_00294	COG2068	MobA-Related Protein
JS608_00295	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
JS608_00305	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
JS608_00306	COG0667	Aldo Keto reductase
JS608_00307	COG0456	acetyltransferase
JS608_00309	COG0457	Tetratricopeptide repeat
JS608_00310	COG0010	Belongs to the arginase family
JS608_00311	COG0833	amino acid
JS608_00312	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JS608_00313	COG3829	transcription factor binding
JS608_00315	COG0488	(ABC) transporter
JS608_00318	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JS608_00319	COG5002	protein histidine kinase activity
JS608_00321	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JS608_00322	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JS608_00323	COG4853	Protein conserved in bacteria
JS608_00324	COG4863	YycH protein
JS608_00325	COG5002	protein histidine kinase activity
JS608_00326	COG0745	RESPONSE REGULATOR receiver
JS608_00332	COG0346	lactoylglutathione lyase activity
JS608_00333	COG0305	Participates in initiation and elongation during chromosome replication
JS608_00336	COG3093	addiction module antidote protein HigA
JS608_00337	COG0297	glycogen (starch) synthase activity
JS608_00340	COG0438	transferase activity, transferring glycosyl groups
JS608_00342	COG0515	serine threonine protein kinase
JS608_00344	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
JS608_00345	COG4241	membrane
JS608_00347	COG5577	PFAM Coat F domain
JS608_00348	COG1733	regulation of RNA biosynthetic process
JS608_00350	COG0697	spore germination
JS608_00351	COG1621	beta-fructofuranosidase activity
JS608_00352	COG1621	beta-fructofuranosidase activity
JS608_00353	COG1802	Transcriptional regulator
JS608_00354	COG2318	DinB family
JS608_00355	COG2211	Major facilitator Superfamily
JS608_00357	COG0778	Nitroreductase
JS608_00358	COG1846	Transcriptional regulator
JS608_00359	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JS608_00360	COG1846	Transcriptional regulator
JS608_00363	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JS608_00364	COG0583	DNA-binding transcription factor activity
JS608_00365	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_00369	COG1404	Belongs to the peptidase S8 family
JS608_00371	COG0697	spore germination
JS608_00373	COG1959	2 iron, 2 sulfur cluster binding
JS608_00374	COG1396	sequence-specific DNA binding
JS608_00376	COG1331	Highly conserved protein containing a thioredoxin domain
JS608_00377	COG1266	CAAX protease self-immunity
JS608_00378	COG2814	Major facilitator Superfamily
JS608_00378	COG0477	Major facilitator Superfamily
JS608_00379	COG0346	lactoylglutathione lyase activity
JS608_00380	COG1609	Transcriptional regulator
JS608_00381	COG0708	Exodeoxyribonuclease III
JS608_00382	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JS608_00383	COG2169	Transcriptional regulator
JS608_00385	COG0629	single-stranded DNA binding
JS608_00387	COG0012	GTP binding
JS608_00388	COG0243	molybdopterin cofactor binding
JS608_00389	COG4481	Protein conserved in bacteria
JS608_00390	COG3949	Membrane
JS608_00393	COG1475	DNA binding
JS608_00394	COG1192	Involved in chromosome partitioning
JS608_00399	COG1847	R3H domain protein
JS608_00400	COG0706	membrane insertase activity
JS608_00403	COG0592	DNA-directed DNA polymerase activity
JS608_00404	COG2501	S4 domain
JS608_00407	COG0187	DNA topoisomerase II activity
JS608_00408	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JS608_00415	COG0516	GMP reductase activity
JS608_00415	COG0517	IMP dehydrogenase activity
JS608_00416	COG1686	Belongs to the peptidase S11 family
JS608_00420	COG1929	Belongs to the glycerate kinase type-1 family
JS608_00422	COG1428	Deoxynucleoside kinase
JS608_00423	COG1428	Deoxynucleoside kinase
JS608_00424	COG3858	chitin binding
JS608_00424	COG1388	LysM domain
JS608_00425	COG1335	isochorismatase
JS608_00429	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JS608_00430	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JS608_00440	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
JS608_00441	COG3853	Toxic anion resistance protein (TelA)
JS608_00442	COG1982	Orn Lys Arg decarboxylase major
JS608_00444	COG3870	Protein conserved in bacteria
JS608_00445	COG1728	Protein conserved in bacteria
JS608_00446	COG0470	DNA polymerase III
JS608_00447	COG1774	PSP1 C-terminal conserved region
JS608_00449	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JS608_00451	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JS608_00452	COG2002	toxin-antitoxin pair type II binding
JS608_00453	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JS608_00453	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JS608_00454	COG0084	hydrolase, TatD family'
JS608_00455	COG3583	domain protein
JS608_00455	COG3584	3D domain protein
JS608_00456	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JS608_00457	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JS608_00459	COG4466	Protein conserved in bacteria
JS608_00462	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JS608_00463	COG0251	oxidation-reduction process
JS608_00466	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JS608_00470	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JS608_00471	COG2002	toxin-antitoxin pair type II binding
JS608_00472	COG2244	polysaccharide biosynthetic process
JS608_00473	COG3956	TIGRFAM MazG family protein
JS608_00474	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JS608_00477	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JS608_00478	COG1098	S1 RNA binding domain
JS608_00481	COG2208	phosphoserine phosphatase activity
JS608_00482	COG2304	oxidoreductase activity
JS608_00483	COG0515	serine threonine protein kinase
JS608_00484	COG0037	tRNA processing
JS608_00485	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JS608_00486	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JS608_00487	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JS608_00490	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JS608_00491	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JS608_00493	COG0512	Glutamine amidotransferase of anthranilate synthase
JS608_00494	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JS608_00495	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JS608_00496	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JS608_00497	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JS608_00498	COG1396	sequence-specific DNA binding
JS608_00499	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JS608_00500	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
JS608_00516	COG4463	regulation of RNA biosynthetic process
JS608_00517	COG3880	PFAM UvrB UvrC protein
JS608_00519	COG0542	response to heat
JS608_00520	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JS608_00521	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
JS608_00522	COG4956	integral membrane protein (PIN domain superfamily)
JS608_00526	COG1045	serine acetyltransferase
JS608_00528	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
JS608_00529	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JS608_00530	COG3688	RNA-binding protein containing a PIN domain
JS608_00531	COG1595	DNA-templated transcription, initiation
JS608_00532	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JS608_00533	COG0250	Participates in transcription elongation, termination and antitermination
JS608_00538	COG2813	Specifically methylates the guanine in position
JS608_00541	COG1358	cellular component organization or biogenesis
JS608_00568	COG0201	protein transport
JS608_00570	COG0024	Methionine aminopeptidase
JS608_00572	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JS608_00577	COG1122	ATPase activity
JS608_00578	COG1122	ATPase activity
JS608_00579	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JS608_00583	COG2226	methyltransferase
JS608_00584	COG2318	DinB family
JS608_00586	COG0860	N-Acetylmuramoyl-L-alanine amidase
JS608_00587	COG0489	protein tyrosine kinase activity
JS608_00589	COG2194	sulfuric ester hydrolase activity
JS608_00590	COG0726	polysaccharide deacetylase
JS608_00602	COG0738	Major facilitator superfamily
JS608_00603	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JS608_00606	COG0659	secondary active sulfate transmembrane transporter activity
JS608_00607	COG0385	Bile acid
JS608_00608	COG2819	hydrolase of the alpha beta superfamily
JS608_00609	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JS608_00610	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JS608_00611	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JS608_00612	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JS608_00612	COG2207	Transcriptional regulator
JS608_00613	COG3876	Protein conserved in bacteria
JS608_00614	COG1472	Belongs to the glycosyl hydrolase 3 family
JS608_00615	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JS608_00616	COG1263	PTS System
JS608_00616	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JS608_00618	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JS608_00619	COG1683	Conserved Protein
JS608_00625	COG1595	DNA-templated transcription, initiation
JS608_00626	COG5662	AntiSigma factor
JS608_00627	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JS608_00628	COG4856	YbbR-like protein
JS608_00635	COG1346	cytolysis
JS608_00636	COG1380	Effector of murein hydrolase LrgA
JS608_00637	COG1846	Transcriptional regulator
JS608_00638	COG1113	amino acid transport
JS608_00639	COG1011	Hydrolase
JS608_00640	COG4585	Histidine kinase
JS608_00641	COG2197	response regulator
JS608_00642	COG1131	(ABC) transporter
JS608_00646	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
JS608_00651	COG4221	oxidoreductase activity
JS608_00651	COG3321	synthase
JS608_00651	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_00651	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_00652	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_00652	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_00652	COG3321	synthase
JS608_00652	COG0318	PFAM AMP-dependent synthetase and ligase
JS608_00652	COG0300	oxidoreductase activity
JS608_00660	COG0531	amino acid
JS608_00661	COG0584	glycerophosphoryl diester phosphodiesterase
JS608_00662	COG2271	Major facilitator Superfamily
JS608_00664	COG2368	4-hydroxyphenylacetate
JS608_00666	COG3409	Peptidoglycan-binding domain 1 protein
JS608_00669	COG0371	Dehydrogenase
JS608_00671	COG1183	phosphatidylcholine synthase activity
JS608_00672	COG0586	Pfam SNARE associated Golgi protein
JS608_00673	COG0688	phosphatidylethanolamine metabolic process
JS608_00676	COG1301	dicarboxylic acid transport
JS608_00677	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JS608_00678	COG0833	amino acid
JS608_00679	COG2040	homocysteine
JS608_00680	COG1115	amino acid carrier protein
JS608_00681	COG2066	Belongs to the glutaminase family
JS608_00682	COG4191	Histidine kinase
JS608_00684	COG3173	Aminoglycoside phosphotransferase
JS608_00686	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JS608_00687	COG0778	Nitroreductase
JS608_00688	COG0346	lactoylglutathione lyase activity
JS608_00689	COG2259	Doxx family
JS608_00690	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JS608_00692	COG3773	Cell wall hydrolase
JS608_00693	COG3540	Alkaline phosphatase
JS608_00694	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JS608_00695	COG0805	protein transport
JS608_00697	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JS608_00698	COG0477	Major facilitator Superfamily
JS608_00699	COG1309	transcriptional regulator
JS608_00700	COG0252	asparaginase activity
JS608_00701	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
JS608_00702	COG1405	negative regulation of cell septum assembly
JS608_00702	COG3012	SEC-C Motif Domain Protein
JS608_00703	COG0667	Aldo Keto reductase
JS608_00705	COG1595	DNA-templated transcription, initiation
JS608_00706	COG1595	DNA-templated transcription, initiation
JS608_00707	COG1876	peptidase activity
JS608_00708	COG0457	Tetratricopeptide repeat
JS608_00709	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_00711	COG0803	Belongs to the bacterial solute-binding protein 9 family
JS608_00712	COG1121	(ABC) transporter
JS608_00713	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JS608_00714	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JS608_00715	COG2310	stress, protein
JS608_00716	COG2310	stress, protein
JS608_00717	COG2310	stress, protein
JS608_00718	COG0861	Integral membrane protein TerC family
JS608_00720	COG3853	Toxic anion resistance protein (TelA)
JS608_00721	COG0477	Major facilitator Superfamily
JS608_00722	COG0517	IMP dehydrogenase activity
JS608_00722	COG4175	Glycine betaine
JS608_00723	COG4176	ABC-type proline glycine betaine transport system permease component
JS608_00724	COG2113	Glycine betaine
JS608_00725	COG1473	amidohydrolase
JS608_00726	COG1288	antiporter activity
JS608_00728	COG0366	Alpha amylase catalytic
JS608_00730	COG2814	Major facilitator Superfamily
JS608_00731	COG1846	Transcriptional regulator
JS608_00732	COG1280	lysine exporter protein (LysE YggA)
JS608_00733	COG3403	YqcI/YcgG family
JS608_00734	COG1113	amino acid transport
JS608_00735	COG3665	Urea carboxylase-associated protein
JS608_00738	COG1660	Displays ATPase and GTPase activities
JS608_00740	COG2271	Major facilitator Superfamily
JS608_00741	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JS608_00742	COG3458	cephalosporin-C deacetylase activity
JS608_00743	COG3541	Predicted nucleotidyltransferase
JS608_00744	COG0506	proline dehydrogenase activity
JS608_00745	COG1012	belongs to the aldehyde dehydrogenase family
JS608_00746	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JS608_00747	COG2508	Transcriptional regulator
JS608_00749	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JS608_00749	COG1587	Uroporphyrinogen-III synthase
JS608_00750	COG2146	nitrite reductase [NAD(P)H] activity
JS608_00751	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JS608_00752	COG0523	cobalamin synthesis protein
JS608_00753	COG1063	alcohol dehydrogenase
JS608_00754	COG1714	RDD family
JS608_00756	COG2723	6-phospho-beta-galactosidase activity
JS608_00758	COG3209	COG3209 Rhs family protein
JS608_00759	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
JS608_00761	COG1733	regulation of RNA biosynthetic process
JS608_00763	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_00764	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_00765	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
JS608_00768	COG2364	Membrane
JS608_00769	COG1126	abc transporter atp-binding protein
JS608_00770	COG0765	amino acid transport
JS608_00771	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JS608_00772	COG0583	DNA-binding transcription factor activity
JS608_00773	COG0163	prenyltransferase activity
JS608_00774	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
JS608_00777	COG3104	oligopeptide transport
JS608_00778	COG5434	Belongs to the glycosyl hydrolase 28 family
JS608_00780	COG0697	spore germination
JS608_00782	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JS608_00783	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JS608_00784	COG0456	acetyltransferase
JS608_00785	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JS608_00786	COG0765	amino acid transport
JS608_00787	COG1126	abc transporter atp-binding protein
JS608_00788	COG1473	amidohydrolase
JS608_00789	COG1473	amidohydrolase
JS608_00790	COG2079	MmgE PrpD family protein
JS608_00791	COG1136	(ABC) transporter
JS608_00792	COG0577	efflux transmembrane transporter activity
JS608_00793	COG0745	RESPONSE REGULATOR receiver
JS608_00794	COG3850	Histidine kinase
JS608_00794	COG5002	protein histidine kinase activity
JS608_00795	COG0457	Tetratricopeptide repeat
JS608_00797	COG0527	aspartate kinase activity
JS608_00798	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JS608_00799	COG4605	iron ion homeostasis
JS608_00800	COG4604	ABC transporter, ATP-binding protein
JS608_00801	COG4607	ABC-type enterochelin transport system periplasmic component
JS608_00802	COG2814	Major facilitator Superfamily
JS608_00803	COG1309	transcriptional regulator
JS608_00804	COG0778	Nitroreductase
JS608_00805	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JS608_00806	COG0640	Transcriptional regulator
JS608_00807	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JS608_00808	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JS608_00809	COG1012	belongs to the aldehyde dehydrogenase family
JS608_00810	COG4975	Glucose uptake
JS608_00811	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_00812	COG4549	nuclear export factor GLE1
JS608_00813	COG1276	copper resistance
JS608_00813	COG2372	response to copper ion
JS608_00814	COG1349	DNA-binding transcription factor activity
JS608_00816	COG2213	PTS system mannitol-specific
JS608_00817	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JS608_00819	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JS608_00821	COG0561	phosphatase activity
JS608_00823	COG1914	H( )-stimulated, divalent metal cation uptake system
JS608_00825	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
JS608_00826	COG1984	allophanate hydrolase subunit 2
JS608_00827	COG1414	Transcriptional regulator
JS608_00828	COG2755	lipolytic protein G-D-S-L family
JS608_00830	COG2329	Antibiotic biosynthesis monooxygenase
JS608_00831	COG0768	penicillin binding
JS608_00832	COG4989	oxidoreductase activity
JS608_00833	COG3711	transcriptional antiterminator
JS608_00834	COG0318	PFAM AMP-dependent synthetase and ligase
JS608_00835	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_00836	COG1917	Cupin 2, conserved barrel domain protein
JS608_00837	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JS608_00838	COG3871	stress protein (general stress protein 26)
JS608_00841	COG2814	Major facilitator Superfamily
JS608_00842	COG1522	sequence-specific DNA binding
JS608_00843	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JS608_00843	COG0551	DNA topoisomerase type I activity
JS608_00844	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
JS608_00845	COG3706	GGDEF domain
JS608_00846	COG5298	Protein conserved in bacteria
JS608_00847	COG1215	transferase activity, transferring glycosyl groups
JS608_00849	COG0531	amino acid
JS608_00850	COG0494	nUDIX hydrolase
JS608_00851	COG0028	Belongs to the TPP enzyme family
JS608_00852	COG5632	N-Acetylmuramoyl-L-alanine amidase
JS608_00852	COG1388	LysM domain
JS608_00852	COG3409	Peptidoglycan-binding domain 1 protein
JS608_00855	COG0457	Tetratricopeptide repeat
JS608_00862	COG1914	H( )-stimulated, divalent metal cation uptake system
JS608_00864	COG4876	unkown
JS608_00865	COG2076	Multidrug Resistance protein
JS608_00866	COG2217	Heavy metal translocating P-type atpase
JS608_00867	COG3729	General stress protein
JS608_00868	COG0662	Cupin 2, conserved barrel domain protein
JS608_00869	COG2329	Antibiotic biosynthesis monooxygenase
JS608_00870	COG3546	catalase activity
JS608_00871	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JS608_00872	COG3290	protein histidine kinase activity
JS608_00873	COG4565	transcriptional regulatory protein
JS608_00874	COG1301	dicarboxylic acid transport
JS608_00875	COG0628	permease
JS608_00876	COG1131	(ABC) transporter
JS608_00877	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JS608_00879	COG1960	acyl-CoA dehydrogenase activity
JS608_00882	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JS608_00883	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JS608_00885	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JS608_00886	COG0513	Belongs to the DEAD box helicase family
JS608_00887	COG3402	PFAM membrane-flanked domain
JS608_00888	COG3428	Bacterial PH domain
JS608_00889	COG0705	Rhomboid family
JS608_00891	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
JS608_00892	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JS608_00893	COG0864	Transcriptional regulator
JS608_00894	COG2337	Toxic component of a toxin-antitoxin (TA) module
JS608_00895	COG1366	Belongs to the anti-sigma-factor antagonist family
JS608_00896	COG1366	Belongs to the anti-sigma-factor antagonist family
JS608_00897	COG2172	sigma factor antagonist activity
JS608_00898	COG2208	phosphoserine phosphatase activity
JS608_00899	COG1366	Belongs to the anti-sigma-factor antagonist family
JS608_00901	COG1191	sigma factor activity
JS608_00902	COG2208	phosphoserine phosphatase activity
JS608_00903	COG2183	response to ionizing radiation
JS608_00913	COG2249	NAD(P)H dehydrogenase (quinone) activity
JS608_00915	COG0477	Major facilitator Superfamily
JS608_00917	COG1764	response to oxidative stress
JS608_00918	COG1846	Transcriptional regulator
JS608_00920	COG2030	dehydratase
JS608_00922	COG1959	2 iron, 2 sulfur cluster binding
JS608_00923	COG2910	NAD(P)H-binding
JS608_00924	COG1278	Cold shock
JS608_00926	COG1937	Protein conserved in bacteria
JS608_00927	COG2210	Belongs to the sulfur carrier protein TusA family
JS608_00928	COG0425	Belongs to the sulfur carrier protein TusA family
JS608_00928	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JS608_00929	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JS608_00929	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JS608_00930	COG0425	Belongs to the sulfur carrier protein TusA family
JS608_00931	COG0730	response to heat
JS608_00932	COG1794	racemase activity, acting on amino acids and derivatives
JS608_00935	COG3621	Patatin-like phospholipase
JS608_00937	COG0662	Cupin 2, conserved barrel domain protein
JS608_00940	COG0277	FAD linked oxidase domain protein
JS608_00947	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JS608_00952	COG1064	alcohol dehydrogenase
JS608_00953	COG0789	Transcriptional regulator
JS608_00955	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JS608_00958	COG2814	Major facilitator Superfamily
JS608_00959	COG1309	transcriptional regulator
JS608_00961	COG5577	PFAM Coat F domain
JS608_00964	COG5577	PFAM Coat F domain
JS608_00966	COG4585	Histidine kinase
JS608_00967	COG2197	response regulator
JS608_00968	COG2409	Drug exporters of the RND superfamily
JS608_00969	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
JS608_00970	COG0488	(ABC) transporter
JS608_00971	COG0488	(ABC) transporter
JS608_00972	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JS608_00973	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JS608_00975	COG2814	Major facilitator Superfamily
JS608_00976	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JS608_00978	COG0730	response to heat
JS608_00979	COG0456	acetyltransferase
JS608_00980	COG0789	Transcriptional regulator
JS608_00980	COG4978	Transcriptional regulator
JS608_00981	COG0697	spore germination
JS608_00982	COG1051	belongs to the nudix hydrolase family
JS608_00983	COG2226	methyltransferase
JS608_00984	COG0473	3-isopropylmalate dehydrogenase activity
JS608_00986	COG0473	3-isopropylmalate dehydrogenase activity
JS608_00987	COG1802	Transcriptional regulator
JS608_00988	COG1819	glycosyl
JS608_00991	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JS608_00993	COG1388	LysM domain
JS608_00994	COG2814	Major facilitator Superfamily
JS608_00995	COG2188	Transcriptional regulator
JS608_00996	COG2186	Transcriptional regulator
JS608_00997	COG2807	transmembrane transport
JS608_00998	COG2076	Multidrug Resistance protein
JS608_00999	COG2076	Multidrug Resistance protein
JS608_01000	COG1309	transcriptional regulator
JS608_01003	COG3832	glyoxalase III activity
JS608_01004	COG0604	alcohol dehydrogenase
JS608_01005	COG2814	Major facilitator Superfamily
JS608_01013	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
JS608_01014	COG0802	atpase or kinase
JS608_01015	COG1214	PFAM Peptidase M22, glycoprotease
JS608_01016	COG0456	acetyltransferase
JS608_01017	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JS608_01018	COG0488	(ABC) transporter
JS608_01021	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JS608_01022	COG0805	protein transport
JS608_01024	COG1266	CAAX protease self-immunity
JS608_01028	COG2856	Zn peptidase
JS608_01030	COG1396	sequence-specific DNA binding
JS608_01043	COG3935	DnaD domain protein
JS608_01044	COG1484	DNA-dependent DNA replication
JS608_01046	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
JS608_01059	COG1595	DNA-templated transcription, initiation
JS608_01064	COG5484	DNA packaging
JS608_01086	COG4824	toxin secretion phage lysis holin
JS608_01090	COG0457	Tetratricopeptide repeat
JS608_01091	COG1063	alcohol dehydrogenase
JS608_01092	COG2211	Major facilitator Superfamily
JS608_01093	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JS608_01095	COG1842	Phage shock protein A
JS608_01096	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JS608_01097	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
JS608_01098	COG4260	virion core protein, lumpy skin disease virus
JS608_01099	COG2755	lipolytic protein G-D-S-L family
JS608_01099	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
JS608_01101	COG1595	DNA-templated transcription, initiation
JS608_01102	COG1063	alcohol dehydrogenase
JS608_01103	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JS608_01104	COG0823	Involved in the tonB-independent uptake of proteins
JS608_01107	COG2132	Multicopper oxidase
JS608_01108	COG1113	amino acid transport
JS608_01109	COG0714	Associated with various cellular activities
JS608_01110	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
JS608_01111	COG1305	Transglutaminase-like
JS608_01115	COG2252	PERMEase
JS608_01116	COG3064	Membrane
JS608_01120	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JS608_01121	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JS608_01122	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JS608_01123	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JS608_01124	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JS608_01127	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JS608_01129	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JS608_01130	COG0138	bifunctional purine biosynthesis protein purh
JS608_01131	COG0151	Belongs to the GarS family
JS608_01133	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
JS608_01134	COG1470	cell adhesion involved in biofilm formation
JS608_01135	COG4496	protein, YerC YecD
JS608_01136	COG0069	glutamate synthase activity
JS608_01138	COG0210	DNA helicase
JS608_01140	COG4851	CamS sex pheromone cAM373 precursor
JS608_01141	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JS608_01142	COG1285	pathogenesis
JS608_01143	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JS608_01147	COG1309	transcriptional regulator
JS608_01148	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JS608_01149	COG1597	lipid kinase activity
JS608_01150	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JS608_01152	COG1131	(ABC) transporter
JS608_01159	COG5444	nuclease activity
JS608_01165	COG3546	catalase activity
JS608_01166	COG0454	-acetyltransferase
JS608_01168	COG2323	membrane
JS608_01169	COG2329	Antibiotic biosynthesis monooxygenase
JS608_01170	COG0346	lactoylglutathione lyase activity
JS608_01171	COG1366	Belongs to the anti-sigma-factor antagonist family
JS608_01172	COG5583	Uncharacterized small protein (DUF2292)
JS608_01173	COG0196	riboflavin kinase activity
JS608_01174	COG0670	Belongs to the BI1 family
JS608_01176	COG1846	Transcriptional regulator
JS608_01177	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JS608_01179	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JS608_01179	COG2124	cytochrome p450
JS608_01180	COG1368	sulfuric ester hydrolase activity
JS608_01181	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
JS608_01182	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JS608_01183	COG1442	glycosyl transferase family 8
JS608_01184	COG1216	Glycosyl transferase, family 2
JS608_01185	COG1442	glycosyl transferase family 8
JS608_01186	COG2223	nitrite transmembrane transporter activity
JS608_01187	COG0531	amino acid
JS608_01188	COG1012	belongs to the aldehyde dehydrogenase family
JS608_01189	COG0840	transmembrane signaling receptor activity
JS608_01190	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_01191	COG0463	Glycosyl transferase, family 2
JS608_01191	COG0457	Tetratricopeptide repeat
JS608_01192	COG0488	(ABC) transporter
JS608_01193	COG0789	Transcriptional regulator
JS608_01194	COG2814	Major facilitator Superfamily
JS608_01195	COG0488	(ABC) transporter
JS608_01196	COG0513	Belongs to the DEAD box helicase family
JS608_01197	COG0456	acetyltransferase
JS608_01198	COG2130	NADP-dependent
JS608_01201	COG3866	Pectate lyase
JS608_01202	COG0471	metal ion transport
JS608_01207	COG0745	RESPONSE REGULATOR receiver
JS608_01207	COG2972	Histidine kinase
JS608_01208	COG3279	Response regulator of the LytR AlgR family
JS608_01210	COG3764	Sortase (surface protein transpeptidase)
JS608_01211	COG3290	protein histidine kinase activity
JS608_01212	COG4565	transcriptional regulatory protein
JS608_01214	COG3181	Tripartite tricarboxylate transporter family receptor
JS608_01215	COG2851	Citrate transporter
JS608_01216	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JS608_01217	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
JS608_01219	COG2258	MOSC domain
JS608_01223	COG0024	Methionine aminopeptidase
JS608_01224	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JS608_01224	COG1263	PTS System
JS608_01227	COG1368	sulfuric ester hydrolase activity
JS608_01229	COG0071	Belongs to the small heat shock protein (HSP20) family
JS608_01232	COG1263	PTS System
JS608_01232	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JS608_01233	COG0366	Alpha amylase catalytic
JS608_01234	COG2188	Transcriptional regulator
JS608_01235	COG0778	Nitroreductase
JS608_01238	COG0737	Belongs to the 5'-nucleotidase family
JS608_01239	COG0693	protein deglycase activity
JS608_01240	COG1609	Transcriptional regulator
JS608_01243	COG2814	Major facilitator Superfamily
JS608_01246	COG4980	gas vesicle protein
JS608_01247	COG1295	ribonuclease BN
JS608_01249	COG0477	Major facilitator Superfamily
JS608_01250	COG0387	Pfam Sodium calcium exchanger
JS608_01252	COG0668	transmembrane transport
JS608_01253	COG0535	radical SAM domain protein
JS608_01255	COG0726	polysaccharide deacetylase
JS608_01256	COG2084	Dehydrogenase
JS608_01258	COG0598	Magnesium transport protein CorA
JS608_01259	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JS608_01260	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JS608_01262	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JS608_01263	COG4637	Psort location Cytoplasmic, score
JS608_01265	COG0022	dehydrogenase e1 component
JS608_01266	COG0508	dehydrogenase complex catalyzes the overall conversion of
JS608_01267	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JS608_01268	COG3284	Transcriptional regulator
JS608_01270	COG1486	melibiose metabolic process
JS608_01271	COG1737	Transcriptional regulator
JS608_01272	COG1263	PTS System
JS608_01272	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JS608_01273	COG1263	PTS System
JS608_01273	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JS608_01274	COG1132	(ABC) transporter
JS608_01275	COG1132	(ABC) transporter
JS608_01276	COG2259	Doxx family
JS608_01277	COG2514	catechol 2,3-dioxygenase activity
JS608_01279	COG1695	Transcriptional regulator
JS608_01280	COG2249	NAD(P)H dehydrogenase (quinone) activity
JS608_01281	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
JS608_01283	COG2732	(Barnase) inhibitor
JS608_01284	COG2318	DinB family
JS608_01285	COG2814	Major facilitator Superfamily
JS608_01286	COG1846	Transcriptional regulator
JS608_01287	COG0392	lysyltransferase activity
JS608_01287	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JS608_01288	COG0384	phenazine biosynthesis protein PhzF
JS608_01289	COG0778	Nitroreductase
JS608_01295	COG2814	Major facilitator Superfamily
JS608_01297	COG3591	Belongs to the peptidase S1B family
JS608_01299	COG3103	Sh3 type 3 domain protein
JS608_01300	COG5658	integral membrane protein
JS608_01301	COG0596	Alpha beta hydrolase
JS608_01302	COG0463	Glycosyl transferase, family 2
JS608_01303	COG4485	Bacterial membrane protein, YfhO
JS608_01304	COG1988	membrane-bound metal-dependent
JS608_01305	COG1194	a g-specific adenine glycosylase
JS608_01307	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_01311	COG1132	(ABC) transporter
JS608_01312	COG4129	membrane
JS608_01314	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JS608_01315	COG0735	belongs to the Fur family
JS608_01338	COG3340	Belongs to the peptidase S51 family
JS608_01340	COG0277	FAD linked oxidase domain protein
JS608_01342	COG0747	negative chemotaxis
JS608_01343	COG0601	transmembrane transport
JS608_01344	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JS608_01345	COG0444	Belongs to the ABC transporter superfamily
JS608_01346	COG4608	Belongs to the ABC transporter superfamily
JS608_01347	COG0753	catalase activity
JS608_01349	COG1116	anion transmembrane transporter activity
JS608_01350	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JS608_01351	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JS608_01355	COG1476	TRANSCRIPTIONal
JS608_01357	COG3382	B3 4 domain protein
JS608_01358	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JS608_01360	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JS608_01361	COG0789	Transcriptional regulator
JS608_01362	COG1664	Polymer-forming cytoskeletal
JS608_01363	COG1664	Polymer-forming cytoskeletal
JS608_01367	COG1846	Transcriptional regulator
JS608_01368	COG1566	PFAM secretion protein HlyD family protein
JS608_01369	COG2814	Major facilitator Superfamily
JS608_01370	COG0655	NAD(P)H dehydrogenase (quinone) activity
JS608_01373	COG1725	Transcriptional regulator
JS608_01374	COG1131	(ABC) transporter
JS608_01375	COG1131	(ABC) transporter
JS608_01376	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JS608_01377	COG1278	Cold shock
JS608_01378	COG1464	Belongs to the NlpA lipoprotein family
JS608_01379	COG3706	GGDEF domain
JS608_01380	COG1823	symporter activity
JS608_01384	COG5577	PFAM Coat F domain
JS608_01385	COG0737	Belongs to the 5'-nucleotidase family
JS608_01385	COG1525	nuclease
JS608_01385	COG4085	toxin activity
JS608_01386	COG3764	Sortase (surface protein transpeptidase)
JS608_01387	COG0564	pseudouridine synthase activity
JS608_01389	COG0517	IMP dehydrogenase activity
JS608_01390	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JS608_01391	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JS608_01391	COG3153	acetyltransferase
JS608_01393	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
JS608_01394	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JS608_01396	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JS608_01397	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JS608_01398	COG2203	Gaf domain
JS608_01398	COG4585	Histidine kinase
JS608_01399	COG2197	response regulator
JS608_01400	COG0431	NADPH-dependent FMN reductase
JS608_01403	COG0791	NLP P60 protein
JS608_01403	COG1388	LysM domain
JS608_01404	COG1959	2 iron, 2 sulfur cluster binding
JS608_01405	COG0668	transmembrane transport
JS608_01406	COG2719	SpoVR family
JS608_01407	COG1785	Belongs to the alkaline phosphatase family
JS608_01408	COG0791	NLP P60 protein
JS608_01408	COG1388	LysM domain
JS608_01409	COG0583	DNA-binding transcription factor activity
JS608_01410	COG0372	Belongs to the citrate synthase family
JS608_01411	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_01412	COG0531	amino acid
JS608_01413	COG0733	neurotransmitter:sodium symporter activity
JS608_01416	COG1595	DNA-templated transcription, initiation
JS608_01417	COG0204	Acyl-transferase
JS608_01418	COG1253	flavin adenine dinucleotide binding
JS608_01419	COG0789	Transcriptional regulator
JS608_01420	COG0436	Aminotransferase
JS608_01421	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JS608_01422	COG1253	flavin adenine dinucleotide binding
JS608_01423	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JS608_01424	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JS608_01425	COG0584	glycerophosphoryl diester phosphodiesterase
JS608_01427	COG0668	transmembrane transport
JS608_01428	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JS608_01429	COG0726	polysaccharide deacetylase
JS608_01430	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JS608_01431	COG3226	Transcriptional regulator
JS608_01433	COG0589	response to stress
JS608_01435	COG1132	(ABC) transporter
JS608_01436	COG1132	(ABC) transporter
JS608_01437	COG0702	epimerase
JS608_01441	COG0189	ligase activity
JS608_01442	COG0189	ligase activity
JS608_01445	COG4335	DNA alkylation repair
JS608_01446	COG0561	phosphatase activity
JS608_01447	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JS608_01449	COG0475	glutathione-regulated potassium exporter activity
JS608_01450	COG0490	domain, Protein
JS608_01452	COG1024	Enoyl-CoA hydratase
JS608_01454	COG4152	abc transporter atp-binding protein
JS608_01455	COG1668	transmembrane transport
JS608_01456	COG0420	3'-5' exonuclease activity
JS608_01457	COG4717	serine-type aminopeptidase activity
JS608_01460	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JS608_01464	COG4980	gas vesicle protein
JS608_01467	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JS608_01468	COG0537	adenosine 5'-monophosphoramidase activity
JS608_01469	COG1131	(ABC) transporter
JS608_01470	COG4473	ABC transporter
JS608_01472	COG1473	amidohydrolase
JS608_01473	COG3069	C4-dicarboxylate transmembrane transporter activity
JS608_01474	COG2329	Antibiotic biosynthesis monooxygenase
JS608_01475	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JS608_01477	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
JS608_01479	COG1309	transcriptional regulator
JS608_01480	COG1511	domain protein
JS608_01481	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JS608_01483	COG1363	Peptidase, m42
JS608_01484	COG1301	dicarboxylic acid transport
JS608_01486	COG1234	tRNA 3'-trailer cleavage
JS608_01487	COG0095	Lipoate-protein ligase
JS608_01488	COG0702	epimerase
JS608_01489	COG0318	PFAM AMP-dependent synthetase and ligase
JS608_01491	COG0501	Belongs to the peptidase M48B family
JS608_01492	COG1404	Belongs to the peptidase S8 family
JS608_01493	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
JS608_01494	COG0406	alpha-ribazole phosphatase activity
JS608_01495	COG0183	Belongs to the thiolase family
JS608_01496	COG0318	PFAM AMP-dependent synthetase and ligase
JS608_01497	COG1268	BioY protein
JS608_01498	COG0840	transmembrane signaling receptor activity
JS608_01499	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JS608_01499	COG0723	plastoquinol--plastocyanin reductase activity
JS608_01500	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_01502	COG4903	ComK protein
JS608_01504	COG5646	InterPro IPR014922
JS608_01508	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JS608_01511	COG0398	Pfam SNARE associated Golgi protein
JS608_01512	COG0681	Belongs to the peptidase S26 family
JS608_01514	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JS608_01515	COG1846	Transcriptional regulator
JS608_01516	COG3180	Ammonia monooxygenase
JS608_01517	COG2814	Major facilitator Superfamily
JS608_01519	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
JS608_01520	COG2323	membrane
JS608_01523	COG0420	3'-5' exonuclease activity
JS608_01524	COG0419	ATPase involved in DNA repair
JS608_01525	COG1403	HNH endonuclease
JS608_01533	COG0179	Fumarylacetoacetate (FAA) hydrolase
JS608_01536	COG0367	asparagine synthase
JS608_01537	COG1562	ergosterol biosynthetic process
JS608_01538	COG0534	Mate efflux family protein
JS608_01539	COG1917	Cupin 2, conserved barrel domain protein
JS608_01539	COG2207	Transcriptional regulator
JS608_01540	COG1609	Transcriptional regulator
JS608_01541	COG0673	inositol 2-dehydrogenase activity
JS608_01542	COG2318	DinB family
JS608_01543	COG1357	PFAM Pentapeptide repeats (8 copies)
JS608_01544	COG2153	protein acetylation
JS608_01545	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JS608_01545	COG0646	methionine synthase
JS608_01547	COG2996	Protein conserved in bacteria
JS608_01548	COG1744	ABC transporter substrate-binding protein PnrA-like
JS608_01551	COG1307	EDD domain protein, DegV family
JS608_01552	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JS608_01556	COG0561	phosphatase activity
JS608_01557	COG1073	alpha beta
JS608_01558	COG2151	metal-sulfur cluster biosynthetic enzyme
JS608_01560	COG0277	FAD linked oxidase domain protein
JS608_01561	COG2271	Major facilitator Superfamily
JS608_01563	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
JS608_01565	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JS608_01566	COG0505	Belongs to the CarA family
JS608_01568	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JS608_01571	COG2267	carboxylic ester hydrolase activity
JS608_01573	COG1744	ABC transporter substrate-binding protein PnrA-like
JS608_01576	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JS608_01577	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JS608_01578	COG5504	Zn-dependent protease
JS608_01579	COG0444	Belongs to the ABC transporter superfamily
JS608_01580	COG4608	Belongs to the ABC transporter superfamily
JS608_01582	COG0601	transmembrane transport
JS608_01583	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JS608_01585	COG0180	Tryptophanyl-tRNA synthetase
JS608_01586	COG4166	transmembrane transport
JS608_01587	COG0601	transmembrane transport
JS608_01588	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JS608_01589	COG0444	Belongs to the ABC transporter superfamily
JS608_01590	COG4608	Belongs to the ABC transporter superfamily
JS608_01592	COG0456	acetyltransferase
JS608_01593	COG1393	Belongs to the ArsC family
JS608_01594	COG0861	Integral membrane protein TerC family
JS608_01595	COG4862	establishment of competence for transformation
JS608_01596	COG4469	Competence protein
JS608_01597	COG1164	Oligoendopeptidase f
JS608_01599	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
JS608_01600	COG2346	COG2346, Truncated hemoglobins
JS608_01601	COG0741	lytic transglycosylase activity
JS608_01602	COG4116	CYTH
JS608_01604	COG2357	RelA SpoT domain protein
JS608_01605	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JS608_01606	COG0564	pseudouridine synthase activity
JS608_01608	COG0475	glutathione-regulated potassium exporter activity
JS608_01608	COG0569	domain protein
JS608_01609	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JS608_01610	COG0352	thiamine-phosphate diphosphorylase activity
JS608_01611	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JS608_01612	COG2104	thiamine diphosphate biosynthetic process
JS608_01614	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JS608_01615	COG0351	phosphomethylpyrimidine kinase
JS608_01616	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
JS608_01628	COG0210	DNA helicase
JS608_01632	COG1131	(ABC) transporter
JS608_01635	COG2153	protein acetylation
JS608_01637	COG2382	esterase
JS608_01638	COG0626	cystathionine gamma-synthase activity
JS608_01639	COG0626	cystathionine gamma-synthase activity
JS608_01642	COG5444	nuclease activity
JS608_01644	COG0346	lactoylglutathione lyase activity
JS608_01645	COG2367	Beta-lactamase
JS608_01646	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
JS608_01648	COG1846	Transcriptional regulator
JS608_01650	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
JS608_01651	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JS608_01652	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JS608_01653	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JS608_01653	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JS608_01654	COG1447	Phosphotransferase system cellobiose-specific component IIA
JS608_01656	COG1349	DNA-binding transcription factor activity
JS608_01660	COG1285	pathogenesis
JS608_01663	COG2205	protein histidine kinase activity
JS608_01665	COG3383	formate dehydrogenase (NAD+) activity
JS608_01666	COG2427	Protein of unknown function (DUF1641)
JS608_01667	COG2124	cytochrome p450
JS608_01668	COG1819	glycosyl
JS608_01670	COG1587	Uroporphyrinogen-III synthase
JS608_01671	COG0390	transport system, permease component
JS608_01672	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JS608_01673	COG0697	spore germination
JS608_01674	COG4297	protein containing double-stranded beta helix domain
JS608_01676	COG1252	NADH dehydrogenase
JS608_01678	COG2211	Major facilitator Superfamily
JS608_01679	COG1609	Transcriptional regulator
JS608_01680	COG2721	sulfolactate sulfo-lyase activity
JS608_01681	COG0745	RESPONSE REGULATOR receiver
JS608_01682	COG2770	Histidine kinase
JS608_01682	COG2205	protein histidine kinase activity
JS608_01686	COG4585	Histidine kinase
JS608_01687	COG2197	response regulator
JS608_01693	COG0730	response to heat
JS608_01694	COG2318	DinB family
JS608_01697	COG1388	LysM domain
JS608_01697	COG5632	N-Acetylmuramoyl-L-alanine amidase
JS608_01697	COG3409	Peptidoglycan-binding domain 1 protein
JS608_01699	COG4195	phage-related replication protein
JS608_01701	COG2856	Zn peptidase
JS608_01702	COG1396	sequence-specific DNA binding
JS608_01704	COG1522	sequence-specific DNA binding
JS608_01705	COG1484	DNA-dependent DNA replication
JS608_01709	COG1595	DNA-templated transcription, initiation
JS608_01710	COG5484	DNA packaging
JS608_01710	COG3728	DNA packaging
JS608_01711	COG1783	phage Terminase large subunit
JS608_01712	COG5518	Phage portal protein
JS608_01713	COG0338	D12 class N6 adenine-specific DNA methyltransferase
JS608_01714	COG4653	Phage capsid family
JS608_01724	COG5412	phage tail tape measure protein
JS608_01724	COG3953	SLT domain
JS608_01724	COG3953	SLT domain
JS608_01724	COG5412	phage tail tape measure protein
JS608_01724	COG5412	phage tail tape measure protein
JS608_01724	COG3953	SLT domain
JS608_01725	COG1652	LysM domain
JS608_01726	COG4193	domain, Protein
JS608_01728	COG3628	GPW Gp25 family protein
JS608_01729	COG3299	homolog of phage Mu protein gp47
JS608_01730	COG3778	Protein conserved in bacteria
JS608_01738	COG5632	N-Acetylmuramoyl-L-alanine amidase
JS608_01738	COG3409	Peptidoglycan-binding domain 1 protein
JS608_01741	COG0306	phosphate transporter
JS608_01742	COG1392	Phosphate transport regulator
JS608_01743	COG0531	amino acid
JS608_01744	COG0346	lactoylglutathione lyase activity
JS608_01745	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JS608_01746	COG0463	Glycosyl transferase, family 2
JS608_01748	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JS608_01749	COG0477	Major facilitator Superfamily
JS608_01750	COG2362	D-Aminopeptidase
JS608_01751	COG0601	transmembrane transport
JS608_01752	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JS608_01753	COG0444	Belongs to the ABC transporter superfamily
JS608_01754	COG4166	transmembrane transport
JS608_01755	COG1619	proteins homologs of microcin C7 resistance protein MccF
JS608_01756	COG4948	Mandelate Racemase Muconate Lactonizing
JS608_01757	COG0791	NLP P60 protein
JS608_01758	COG4608	Belongs to the ABC transporter superfamily
JS608_01759	COG2706	6-phosphogluconolactonase activity
JS608_01760	COG1834	amidinotransferase
JS608_01761	COG1607	acyl-coa hydrolase
JS608_01762	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JS608_01763	COG2076	Multidrug Resistance protein
JS608_01764	COG2076	Multidrug Resistance protein
JS608_01765	COG0788	formyltetrahydrofolate deformylase activity
JS608_01766	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JS608_01768	COG1764	response to oxidative stress
JS608_01769	COG1846	Transcriptional regulator
JS608_01770	COG1764	response to oxidative stress
JS608_01773	COG0457	Tetratricopeptide repeat
JS608_01773	COG0463	Glycosyl transferase, family 2
JS608_01775	COG2814	Major facilitator Superfamily
JS608_01776	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JS608_01778	COG1404	Belongs to the peptidase S8 family
JS608_01779	COG1366	Belongs to the anti-sigma-factor antagonist family
JS608_01780	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JS608_01781	COG1122	ATPase activity
JS608_01782	COG4721	ABC-type cobalt transport system, permease component
JS608_01783	COG3858	chitin binding
JS608_01783	COG1388	LysM domain
JS608_01785	COG2239	Acts as a magnesium transporter
JS608_01786	COG0789	Transcriptional regulator
JS608_01789	COG1846	Transcriptional regulator
JS608_01790	COG0726	polysaccharide deacetylase
JS608_01791	COG1793	dna ligase
JS608_01791	COG3285	dna ligase
JS608_01792	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
JS608_01793	COG0586	Pfam SNARE associated Golgi protein
JS608_01794	COG0861	Integral membrane protein TerC family
JS608_01795	COG1191	sigma factor activity
JS608_01800	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JS608_01801	COG2323	membrane
JS608_01803	COG3594	Acyltransferase
JS608_01804	COG5002	protein histidine kinase activity
JS608_01805	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JS608_01809	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JS608_01810	COG0436	Aminotransferase
JS608_01816	COG3852	Histidine kinase
JS608_01817	COG1846	Transcriptional regulator
JS608_01818	COG1360	Flagellar Motor Protein
JS608_01819	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JS608_01820	COG0542	response to heat
JS608_01821	COG3949	Membrane
JS608_01824	COG0720	synthase
JS608_01825	COG0602	queuosine metabolic process
JS608_01828	COG4873	Protein conserved in bacteria
JS608_01830	COG3773	Cell wall hydrolase
JS608_01831	COG2244	polysaccharide biosynthetic process
JS608_01832	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JS608_01833	COG2217	Heavy metal translocating P-type atpase
JS608_01834	COG0006	proline dipeptidase activity
JS608_01836	COG1609	Transcriptional regulator
JS608_01837	COG3711	transcriptional antiterminator
JS608_01838	COG1263	PTS System
JS608_01838	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JS608_01838	COG2190	(PTS) system
JS608_01839	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JS608_01840	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JS608_01842	COG1533	DNA photolyase activity
JS608_01843	COG0840	transmembrane signaling receptor activity
JS608_01844	COG2084	Dehydrogenase
JS608_01845	COG2340	Cysteine-rich secretory protein family
JS608_01846	COG0768	penicillin binding
JS608_01847	COG4191	Histidine kinase
JS608_01848	COG0436	Aminotransferase
JS608_01850	COG0784	Response regulator, receiver
JS608_01850	COG0835	chemotaxis
JS608_01852	COG2814	Major facilitator Superfamily
JS608_01853	COG1376	ErfK ybiS ycfS ynhG family protein
JS608_01854	COG1408	metallophosphoesterase
JS608_01855	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_01857	COG2200	EAL domain
JS608_01858	COG4703	Protein of unknown function (DUF1797)
JS608_01859	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
JS608_01861	COG0517	IMP dehydrogenase activity
JS608_01862	COG0583	DNA-binding transcription factor activity
JS608_01863	COG0716	FMN binding
JS608_01865	COG0716	FMN binding
JS608_01869	COG0668	transmembrane transport
JS608_01870	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JS608_01874	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JS608_01876	COG1763	Mo-molybdopterin cofactor biosynthetic process
JS608_01877	COG0314	molybdopterin synthase activity
JS608_01878	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
JS608_01880	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JS608_01881	COG1136	(ABC) transporter
JS608_01882	COG0577	efflux transmembrane transporter activity
JS608_01883	COG1349	DNA-binding transcription factor activity
JS608_01884	COG1105	Belongs to the carbohydrate kinase PfkB family
JS608_01885	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JS608_01885	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JS608_01885	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JS608_01886	COG0681	Belongs to the peptidase S26 family
JS608_01888	COG0488	(ABC) transporter
JS608_01889	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JS608_01890	COG2309	aminopeptidase activity
JS608_01892	COG1077	Cell shape determining protein MreB Mrl
JS608_01893	COG2002	toxin-antitoxin pair type II binding
JS608_01894	COG3852	Histidine kinase
JS608_01895	COG2105	PFAM AIG2 family protein
JS608_01895	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
JS608_01896	COG0569	domain protein
JS608_01898	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JS608_01900	COG0561	phosphatase activity
JS608_01901	COG0242	peptide deformylase activity
JS608_01903	COG0497	DNA recombination
JS608_01906	COG3321	synthase
JS608_01906	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JS608_01906	COG0300	oxidoreductase activity
JS608_01906	COG4221	oxidoreductase activity
JS608_01908	COG4221	oxidoreductase activity
JS608_01908	COG3321	synthase
JS608_01908	COG0300	oxidoreductase activity
JS608_01908	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JS608_01909	COG4221	oxidoreductase activity
JS608_01909	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_01909	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_01909	COG3321	synthase
JS608_01910	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JS608_01910	COG0300	oxidoreductase activity
JS608_01910	COG3321	synthase
JS608_01910	COG4221	oxidoreductase activity
JS608_01911	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JS608_01911	COG4221	oxidoreductase activity
JS608_01911	COG3321	synthase
JS608_01911	COG0300	oxidoreductase activity
JS608_01912	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_01912	COG3321	synthase
JS608_01912	COG4221	oxidoreductase activity
JS608_01912	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_01913	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JS608_01914	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JS608_01915	COG0022	dehydrogenase e1 component
JS608_01916	COG0508	dehydrogenase complex catalyzes the overall conversion of
JS608_01918	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JS608_01920	COG1982	Orn Lys Arg decarboxylase major
JS608_01924	COG0483	inositol monophosphate 1-phosphatase activity
JS608_01926	COG3227	Zinc metalloprotease (Elastase)
JS608_01930	COG1217	gtp-binding protein TYPA
JS608_01932	COG4896	Protein conserved in bacteria
JS608_01934	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
JS608_01935	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JS608_01936	COG2066	Belongs to the glutaminase family
JS608_01938	COG0772	Belongs to the SEDS family
JS608_01939	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
JS608_01942	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JS608_01942	COG2010	Cytochrome c
JS608_01943	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JS608_01944	COG1845	cytochrome c oxidase, subunit III
JS608_01945	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
JS608_01946	COG3336	cytochrome c oxidase
JS608_01949	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
JS608_01950	COG2340	Cysteine-rich secretory protein family
JS608_01953	COG3679	Belongs to the UPF0342 family
JS608_01956	COG0742	ribosomal rna small subunit methyltransferase
JS608_01958	COG3314	Sporulation integral membrane protein YlbJ
JS608_01959	COG1752	Esterase of the alpha-beta hydrolase superfamily
JS608_01960	COG3480	Lon protease (S16) C-terminal proteolytic domain
JS608_01962	COG1399	metal-binding, possibly nucleic acid-binding protein
JS608_01966	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JS608_01970	COG4839	cell division protein FtsL
JS608_01971	COG0768	penicillin binding
JS608_01972	COG0768	penicillin binding
JS608_01976	COG0772	Belongs to the SEDS family
JS608_01979	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JS608_01980	COG0849	cell division
JS608_01981	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JS608_01982	COG1404	Belongs to the peptidase S8 family
JS608_01982	COG4412	M6 family metalloprotease domain protein
JS608_01984	COG1191	sigma factor activity
JS608_01985	COG1191	sigma factor activity
JS608_01986	COG1119	ATPase activity
JS608_01987	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JS608_01988	COG1873	PFAM PRC-barrel domain
JS608_01989	COG1496	oxidoreductase activity
JS608_01990	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JS608_01992	COG0762	integral membrane protein
JS608_01993	COG2302	S4 RNA-binding domain
JS608_01994	COG3599	regulation of cell shape
JS608_01995	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JS608_01996	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JS608_01998	COG0564	pseudouridine synthase activity
JS608_02002	COG2233	PERMEase
JS608_02005	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JS608_02006	COG0505	Belongs to the CarA family
JS608_02007	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JS608_02010	COG0284	orotidine-5'-phosphate decarboxylase activity
JS608_02011	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JS608_02014	COG0306	phosphate transporter
JS608_02017	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JS608_02018	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
JS608_02019	COG1648	precorrin-2 dehydrogenase activity
JS608_02021	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JS608_02022	COG1561	YicC-like family, N-terminal region
JS608_02024	COG0194	GDP metabolic process
JS608_02026	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JS608_02027	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JS608_02028	COG0242	peptide deformylase activity
JS608_02030	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JS608_02030	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JS608_02032	COG0631	protein serine/threonine phosphatase activity
JS608_02033	COG0515	serine threonine protein kinase
JS608_02033	COG2815	serine threonine protein kinase
JS608_02035	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JS608_02036	COG1564	THIamine pyrophosphokinase
JS608_02038	COG1302	Protein conserved in bacteria
JS608_02039	COG1461	Dihydroxyacetone kinase
JS608_02040	COG1760	l-serine dehydratase
JS608_02041	COG1760	l-serine dehydratase
JS608_02042	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JS608_02045	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JS608_02046	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_02049	COG1196	nuclear chromosome segregation
JS608_02050	COG0552	protein localization to endoplasmic reticulum
JS608_02053	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JS608_02055	COG1837	Belongs to the UPF0109 family
JS608_02060	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JS608_02063	COG2257	FlhB HrpN YscU SpaS Family
JS608_02065	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JS608_02066	COG0758	DNA mediated transformation
JS608_02067	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JS608_02069	COG4974	Belongs to the 'phage' integrase family
JS608_02073	COG1815	bacterial-type flagellum-dependent cell motility
JS608_02074	COG1558	bacterial-type flagellum-dependent cell motility
JS608_02075	COG1677	Flagellar hook-basal body complex protein FliE
JS608_02076	COG1766	The M ring may be actively involved in energy transduction
JS608_02077	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JS608_02078	COG1317	bacterial-type flagellum organization
JS608_02079	COG1157	protein secretion by the type III secretion system
JS608_02080	COG2882	bacterial-type flagellum organization
JS608_02081	COG3334	PFAM MgtE intracellular
JS608_02082	COG3144	bacterial-type flagellum assembly
JS608_02083	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
JS608_02084	COG4786	Flagellar basal body rod
JS608_02085	COG1580	Controls the rotational direction of flagella during chemotaxis
JS608_02086	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JS608_02087	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JS608_02087	COG1776	CheC inhibitor of MCP methylation
JS608_02088	COG2201	protein-glutamate methylesterase activity
JS608_02089	COG3190	flagellar
JS608_02090	COG1338	Plays a role in the flagellum-specific transport system
JS608_02091	COG1987	bacterial-type flagellum assembly
JS608_02092	COG1684	flagellar biosynthetic protein fliR
JS608_02093	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JS608_02094	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JS608_02095	COG1419	protein localization to endoplasmic reticulum
JS608_02096	COG0455	bacterial-type flagellum organization
JS608_02097	COG2201	protein-glutamate methylesterase activity
JS608_02098	COG0643	Histidine kinase
JS608_02098	COG2198	Histidine kinase
JS608_02099	COG0835	chemotaxis
JS608_02100	COG1776	CheC inhibitor of MCP methylation
JS608_02102	COG1191	sigma factor activity
JS608_02108	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JS608_02109	COG4589	Belongs to the CDS family
JS608_02111	COG0750	zinc metalloprotease
JS608_02115	COG0195	Participates in both transcription termination and antitermination
JS608_02116	COG2740	Nucleic-acid-binding protein implicated in transcription termination
JS608_02117	COG1358	cellular component organization or biogenesis
JS608_02119	COG1550	Protein conserved in bacteria
JS608_02122	COG0196	riboflavin kinase activity
JS608_02125	COG0726	polysaccharide deacetylase
JS608_02126	COG0612	Peptidase, M16
JS608_02127	COG1873	PFAM PRC-barrel domain
JS608_02128	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JS608_02129	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JS608_02130	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JS608_02131	COG0527	aspartate kinase activity
JS608_02133	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JS608_02134	COG0740	serine-type endopeptidase activity
JS608_02136	COG1674	ftsk spoiiie
JS608_02136	COG4980	gas vesicle protein
JS608_02137	COG2188	Transcriptional regulator
JS608_02138	COG2814	Major facilitator Superfamily
JS608_02139	COG1846	Transcriptional regulator
JS608_02140	COG1033	growth of symbiont in host cell
JS608_02140	COG2409	Drug exporters of the RND superfamily
JS608_02141	COG0612	Peptidase, M16
JS608_02142	COG0612	Peptidase, M16
JS608_02143	COG0300	oxidoreductase activity
JS608_02146	COG1426	Protein conserved in bacteria
JS608_02147	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JS608_02150	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JS608_02152	COG1692	metallophosphoesterase
JS608_02153	COG2359	stage V sporulation protein S
JS608_02157	COG4550	Control of competence regulator ComK, YlbF/YmcA
JS608_02166	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JS608_02167	COG3425	synthase
JS608_02168	COG1024	Enoyl-CoA hydratase
JS608_02169	COG1024	Enoyl-CoA hydratase
JS608_02170	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_02170	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_02170	COG0318	PFAM AMP-dependent synthetase and ligase
JS608_02170	COG0300	oxidoreductase activity
JS608_02170	COG3321	synthase
JS608_02172	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JS608_02172	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_02172	COG3321	synthase
JS608_02172	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_02172	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JS608_02172	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JS608_02172	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JS608_02172	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_02172	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_02172	COG3321	synthase
JS608_02173	COG3321	synthase
JS608_02173	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_02173	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_02173	COG4221	oxidoreductase activity
JS608_02175	COG2124	cytochrome p450
JS608_02176	COG3209	COG3209 Rhs family protein
JS608_02177	COG3619	membrane
JS608_02179	COG1404	Belongs to the peptidase S8 family
JS608_02180	COG4195	phage-related replication protein
JS608_02181	COG1764	response to oxidative stress
JS608_02183	COG2076	Multidrug Resistance protein
JS608_02191	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JS608_02192	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JS608_02193	COG4112	unkown
JS608_02194	COG0860	N-Acetylmuramoyl-L-alanine amidase
JS608_02195	COG0464	growth
JS608_02196	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JS608_02197	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
JS608_02198	COG0789	Transcriptional regulator
JS608_02199	COG0174	glutamine synthetase
JS608_02201	COG2211	Major facilitator Superfamily
JS608_02202	COG3507	Belongs to the glycosyl hydrolase 43 family
JS608_02205	COG1070	Carbohydrate kinase
JS608_02206	COG0574	Belongs to the PEP-utilizing enzyme family
JS608_02206	COG3848	Pyruvate phosphate dikinase
JS608_02207	COG3848	Pyruvate phosphate dikinase
JS608_02207	COG0574	Belongs to the PEP-utilizing enzyme family
JS608_02211	COG1064	alcohol dehydrogenase
JS608_02214	COG0456	acetyltransferase
JS608_02218	COG3397	chitin binding
JS608_02223	COG5434	Belongs to the glycosyl hydrolase 28 family
JS608_02224	COG0756	dUTP diphosphatase activity
JS608_02225	COG4195	phage-related replication protein
JS608_02232	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JS608_02234	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JS608_02238	COG0785	Cytochrome C biogenesis protein
JS608_02239	COG2201	protein-glutamate methylesterase activity
JS608_02240	COG4846	Membrane protein involved in cytochrome C biogenesis
JS608_02242	COG0071	Belongs to the small heat shock protein (HSP20) family
JS608_02245	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JS608_02246	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JS608_02249	COG0824	Thioesterase
JS608_02251	COG4841	protein insertion into membrane
JS608_02253	COG1832	CoA-binding protein
JS608_02254	COG0187	DNA topoisomerase II activity
JS608_02255	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JS608_02258	COG1115	amino acid carrier protein
JS608_02260	COG1063	alcohol dehydrogenase
JS608_02261	COG0800	Aldolase
JS608_02262	COG1312	Catalyzes the dehydration of D-mannonate
JS608_02263	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_02264	COG1609	Transcriptional regulator
JS608_02265	COG2271	Major facilitator Superfamily
JS608_02272	COG2205	protein histidine kinase activity
JS608_02273	COG0745	RESPONSE REGULATOR receiver
JS608_02275	COG3507	Belongs to the glycosyl hydrolase 43 family
JS608_02280	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_02281	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JS608_02282	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JS608_02284	COG2124	cytochrome p450
JS608_02288	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JS608_02290	COG2246	polysaccharide biosynthetic process
JS608_02291	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JS608_02292	COG0586	Pfam SNARE associated Golgi protein
JS608_02293	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JS608_02294	COG1024	Enoyl-CoA hydratase
JS608_02295	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JS608_02296	COG0511	ligase activity, forming carbon-carbon bonds
JS608_02297	COG0439	Biotin carboxylase
JS608_02298	COG0318	PFAM AMP-dependent synthetase and ligase
JS608_02299	COG1960	acyl-CoA dehydrogenase activity
JS608_02300	COG1649	PFAM Uncharacterised BCR, COG1649
JS608_02302	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
JS608_02302	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_02303	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_02304	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_02305	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_02307	COG2027	D-alanyl-D-alanine carboxypeptidase
JS608_02308	COG2017	converts alpha-aldose to the beta-anomer
JS608_02309	COG0534	Mate efflux family protein
JS608_02312	COG0582	viral genome integration into host DNA
JS608_02313	COG0166	Belongs to the GPI family
JS608_02314	COG0405	Gamma-glutamyltransferase
JS608_02316	COG0640	Transcriptional regulator
JS608_02319	COG0604	alcohol dehydrogenase
JS608_02320	COG0493	'glutamate synthase
JS608_02321	COG0067	glutamate synthase
JS608_02321	COG0069	glutamate synthase activity
JS608_02321	COG0070	glutamate synthase
JS608_02322	COG0583	DNA-binding transcription factor activity
JS608_02323	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JS608_02326	COG0300	oxidoreductase activity
JS608_02327	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JS608_02330	COG1070	Carbohydrate kinase
JS608_02331	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JS608_02332	COG0243	molybdopterin cofactor binding
JS608_02336	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_02337	COG1733	regulation of RNA biosynthetic process
JS608_02338	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JS608_02339	COG0662	Cupin 2, conserved barrel domain protein
JS608_02339	COG2207	Transcriptional regulator
JS608_02340	COG1309	transcriptional regulator
JS608_02341	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JS608_02343	COG0640	Transcriptional regulator
JS608_02344	COG0741	lytic transglycosylase activity
JS608_02345	COG2322	membrane
JS608_02348	COG1619	proteins homologs of microcin C7 resistance protein MccF
JS608_02350	COG1388	LysM domain
JS608_02350	COG3584	3D domain protein
JS608_02351	COG0514	ATP-dependent DNA helicase (RecQ)
JS608_02353	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JS608_02355	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JS608_02358	COG0071	Belongs to the small heat shock protein (HSP20) family
JS608_02364	COG1012	belongs to the aldehyde dehydrogenase family
JS608_02365	COG1657	PFAM Prenyltransferase squalene oxidase
JS608_02366	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JS608_02367	COG0733	neurotransmitter:sodium symporter activity
JS608_02368	COG0385	Bile acid
JS608_02369	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JS608_02370	COG0508	dehydrogenase complex catalyzes the overall conversion of
JS608_02372	COG4548	von Willebrand factor, type A
JS608_02373	COG0714	Associated with various cellular activities
JS608_02374	COG2032	superoxide dismutase activity
JS608_02375	COG0791	NLP P60 protein
JS608_02375	COG1388	LysM domain
JS608_02376	COG1819	glycosyl
JS608_02377	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JS608_02379	COG0534	Mate efflux family protein
JS608_02380	COG1366	Belongs to the anti-sigma-factor antagonist family
JS608_02381	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JS608_02382	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JS608_02384	COG2962	Rard protein
JS608_02387	COG1942	4-Oxalocrotonate Tautomerase
JS608_02389	COG1733	regulation of RNA biosynthetic process
JS608_02390	COG0778	Nitroreductase
JS608_02391	COG0400	carboxylic ester hydrolase activity
JS608_02392	COG0346	lactoylglutathione lyase activity
JS608_02394	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JS608_02396	COG2723	6-phospho-beta-galactosidase activity
JS608_02397	COG2188	Transcriptional regulator
JS608_02398	COG0793	Belongs to the peptidase S41A family
JS608_02398	COG3409	Peptidoglycan-binding domain 1 protein
JS608_02399	COG2226	methyltransferase
JS608_02401	COG1876	peptidase activity
JS608_02405	COG0671	phosphoesterase, PA-phosphatase related
JS608_02412	COG1509	lysine 2,3-aminomutase activity
JS608_02413	COG0456	acetyltransferase
JS608_02414	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JS608_02415	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JS608_02416	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JS608_02417	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JS608_02418	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
JS608_02420	COG0456	acetyltransferase
JS608_02421	COG0463	Glycosyl transferase, family 2
JS608_02424	COG4641	Protein conserved in bacteria
JS608_02426	COG1086	Polysaccharide biosynthesis protein
JS608_02433	COG1793	dna ligase
JS608_02437	COG1388	LysM domain
JS608_02438	COG0457	Tetratricopeptide repeat
JS608_02441	COG3391	amine dehydrogenase activity
JS608_02448	COG5444	nuclease activity
JS608_02451	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JS608_02455	COG1846	Transcriptional regulator
JS608_02456	COG4698	Protein conserved in bacteria
JS608_02457	COG2755	lipolytic protein G-D-S-L family
JS608_02458	COG1999	signal sequence binding
JS608_02460	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JS608_02461	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JS608_02462	COG1272	protein, Hemolysin III
JS608_02463	COG0204	Acyl-transferase
JS608_02464	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JS608_02467	COG2136	Putative SAM-dependent methyltransferase
JS608_02467	COG2521	methyltransferase
JS608_02471	COG1413	lyase activity
JS608_02472	COG1418	mRNA catabolic process
JS608_02473	COG0386	Belongs to the glutathione peroxidase family
JS608_02475	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JS608_02476	COG1278	Cold shock
JS608_02480	COG0328	RNA-DNA hybrid ribonuclease activity
JS608_02481	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
JS608_02482	COG0328	RNA-DNA hybrid ribonuclease activity
JS608_02484	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JS608_02487	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JS608_02488	COG1755	Isoprenylcysteine carboxyl methyltransferase
JS608_02489	COG3424	synthase
JS608_02494	COG1335	isochorismatase
JS608_02496	COG2233	PERMEase
JS608_02498	COG3331	DNA recombination
JS608_02506	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JS608_02513	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JS608_02514	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JS608_02519	COG4112	unkown
JS608_02520	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JS608_02521	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JS608_02523	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JS608_02523	COG1372	Participates in initiation and elongation during chromosome replication
JS608_02524	COG1780	Probably involved in ribonucleotide reductase function
JS608_02550	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
JS608_02551	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JS608_02554	COG3584	3D domain protein
JS608_02565	COG3420	alginic acid biosynthetic process
JS608_02565	COG5434	Belongs to the glycosyl hydrolase 28 family
JS608_02566	COG4195	phage-related replication protein
JS608_02574	COG2135	peptidase activity
JS608_02575	COG1793	dna ligase
JS608_02580	COG0756	dUTP diphosphatase activity
JS608_02588	COG4474	Belongs to the UPF0398 family
JS608_02600	COG3655	Transcriptional regulator
JS608_02620	COG3655	Transcriptional regulator
JS608_02638	COG0776	regulation of translation
JS608_02667	COG2433	Pfam Transposase IS66
JS608_02669	COG5434	Belongs to the glycosyl hydrolase 28 family
JS608_02670	COG3409	Peptidoglycan-binding domain 1 protein
JS608_02670	COG5632	N-Acetylmuramoyl-L-alanine amidase
JS608_02675	COG0457	Tetratricopeptide repeat
JS608_02677	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JS608_02682	COG5444	nuclease activity
JS608_02684	COG4282	regulation of fungal-type cell wall biogenesis
JS608_02685	COG1525	nuclease
JS608_02687	COG2233	PERMEase
JS608_02689	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JS608_02690	COG1199	ATP-dependent helicase activity
JS608_02693	COG0116	Belongs to the methyltransferase superfamily
JS608_02698	COG3359	exonuclease
JS608_02699	COG1111	helicase
JS608_02699	COG1205	dead DEAH box helicase
JS608_02700	COG2190	(PTS) system
JS608_02701	COG0071	Belongs to the small heat shock protein (HSP20) family
JS608_02709	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JS608_02709	COG4499	WXG100 protein secretion system (Wss), protein YukC
JS608_02711	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JS608_02712	COG3935	DnaD domain protein
JS608_02714	COG0436	Aminotransferase
JS608_02715	COG5353	protein conserved in bacteria
JS608_02717	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JS608_02717	COG1199	ATP-dependent helicase activity
JS608_02723	COG0438	transferase activity, transferring glycosyl groups
JS608_02724	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JS608_02727	COG1694	Mazg nucleotide pyrophosphohydrolase
JS608_02728	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JS608_02729	COG2140	Oxalate decarboxylase
JS608_02731	COG4347	Protein of unknown function (DUF1405)
JS608_02732	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JS608_02732	COG2010	Cytochrome c
JS608_02733	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JS608_02734	COG0723	plastoquinol--plastocyanin reductase activity
JS608_02737	COG0457	Tetratricopeptide repeat
JS608_02739	COG0287	Prephenate dehydrogenase
JS608_02746	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JS608_02747	COG4401	Chorismate mutase type I
JS608_02750	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
JS608_02751	COG0105	UTP biosynthetic process
JS608_02752	COG0142	geranyltranstransferase activity
JS608_02754	COG0142	geranyltranstransferase activity
JS608_02757	COG0776	regulation of translation
JS608_02758	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JS608_02766	COG0539	negative regulation of cytoplasmic translation
JS608_02770	COG2959	enzyme of heme biosynthesis
JS608_02771	COG3409	Peptidoglycan-binding domain 1 protein
JS608_02771	COG3773	Cell wall hydrolase
JS608_02772	COG2339	peptidase activity
JS608_02773	COG0492	ferredoxin-NADP+ reductase activity
JS608_02774	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JS608_02775	COG4862	establishment of competence for transformation
JS608_02776	COG1408	metallophosphoesterase
JS608_02777	COG1388	LysM domain
JS608_02778	COG1266	CAAX protease self-immunity
JS608_02779	COG0514	ATP-dependent DNA helicase (RecQ)
JS608_02780	COG4955	Helix-turn-helix domain
JS608_02781	COG1141	Ferredoxin
JS608_02782	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JS608_02783	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JS608_02785	COG1595	DNA-templated transcription, initiation
JS608_02786	COG5002	protein histidine kinase activity
JS608_02787	COG0745	RESPONSE REGULATOR receiver
JS608_02788	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JS608_02789	COG1333	cytochrome c biogenesis protein
JS608_02790	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JS608_02791	COG1187	pseudouridine synthase activity
JS608_02792	COG0700	Nucleoside recognition
JS608_02793	COG2715	membrane protein required for spore maturation
JS608_02794	COG1686	Belongs to the peptidase S11 family
JS608_02799	COG1547	Domain of unknown function (DUF309)
JS608_02800	COG0456	acetyltransferase
JS608_02803	COG0307	riboflavin synthase, alpha
JS608_02804	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JS608_02804	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JS608_02806	COG0681	Belongs to the peptidase S26 family
JS608_02808	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JS608_02809	COG4086	secreted protein
JS608_02810	COG0019	diaminopimelate decarboxylase activity
JS608_02811	COG0697	spore germination
JS608_02818	COG1191	sigma factor activity
JS608_02820	COG1366	Belongs to the anti-sigma-factor antagonist family
JS608_02821	COG1686	Belongs to the peptidase S11 family
JS608_02822	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
JS608_02823	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
JS608_02824	COG4974	Belongs to the 'phage' integrase family
JS608_02826	COG0735	belongs to the Fur family
JS608_02827	COG1300	Membrane
JS608_02831	COG0281	malic enzyme
JS608_02832	COG1757	Na H antiporter
JS608_02833	COG1027	Aspartate ammonia-lyase
JS608_02834	COG0252	asparaginase activity
JS608_02835	COG1396	sequence-specific DNA binding
JS608_02836	COG1379	DNA repair
JS608_02837	COG0494	nUDIX hydrolase
JS608_02839	COG0667	Aldo Keto reductase
JS608_02843	COG4918	Iron-sulphur cluster biosynthesis
JS608_02844	COG0456	acetyltransferase
JS608_02844	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JS608_02845	COG2329	Antibiotic biosynthesis monooxygenase
JS608_02846	COG0456	acetyltransferase
JS608_02847	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JS608_02850	COG0628	permease
JS608_02852	COG0346	lactoylglutathione lyase activity
JS608_02854	COG3048	D-serine ammonia-lyase activity
JS608_02855	COG0300	oxidoreductase activity
JS608_02856	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JS608_02857	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JS608_02858	COG1024	Enoyl-CoA hydratase
JS608_02859	COG3425	synthase
JS608_02860	COG2124	cytochrome p450
JS608_02861	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_02861	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_02861	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JS608_02861	COG3321	synthase
JS608_02861	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JS608_02862	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JS608_02862	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JS608_02862	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_02862	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_02862	COG3321	synthase
JS608_02863	COG3321	synthase
JS608_02863	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_02863	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_02863	COG0300	oxidoreductase activity
JS608_02863	COG0318	PFAM AMP-dependent synthetase and ligase
JS608_02864	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_02864	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_02864	COG3321	synthase
JS608_02864	COG0318	PFAM AMP-dependent synthetase and ligase
JS608_02864	COG0300	oxidoreductase activity
JS608_02866	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_02866	COG0300	oxidoreductase activity
JS608_02866	COG0318	PFAM AMP-dependent synthetase and ligase
JS608_02866	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_02866	COG3321	synthase
JS608_02867	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JS608_02867	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JS608_02867	COG3321	synthase
JS608_02867	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_02867	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_02868	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_02869	COG0318	PFAM AMP-dependent synthetase and ligase
JS608_02872	COG2070	2-Nitropropane dioxygenase
JS608_02872	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JS608_02873	COG0250	Participates in transcription elongation, termination and antitermination
JS608_02877	COG0596	Alpha beta hydrolase
JS608_02879	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JS608_02880	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JS608_02883	COG0706	membrane insertase activity
JS608_02884	COG2195	Cleaves the N-terminal amino acid of tripeptides
JS608_02885	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JS608_02886	COG0346	lactoylglutathione lyase activity
JS608_02888	COG1376	ErfK ybiS ycfS ynhG family protein
JS608_02889	COG4129	membrane
JS608_02890	COG1126	abc transporter atp-binding protein
JS608_02891	COG0765	amino acid transport
JS608_02892	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JS608_02894	COG1597	lipid kinase activity
JS608_02895	COG0508	dehydrogenase complex catalyzes the overall conversion of
JS608_02896	COG0022	dehydrogenase e1 component
JS608_02897	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JS608_02898	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JS608_02899	COG3426	butyrate kinase activity
JS608_02900	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JS608_02901	COG0280	phosphate acetyltransferase
JS608_02902	COG3829	transcription factor binding
JS608_02902	COG3290	protein histidine kinase activity
JS608_02904	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JS608_02905	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JS608_02906	COG2079	MmgE PrpD family protein
JS608_02907	COG0372	Belongs to the citrate synthase family
JS608_02908	COG1960	acyl-CoA dehydrogenase activity
JS608_02909	COG1250	3-hydroxyacyl-CoA dehydrogenase
JS608_02910	COG0183	Belongs to the thiolase family
JS608_02911	COG0584	glycerophosphoryl diester phosphodiesterase
JS608_02912	COG0860	N-Acetylmuramoyl-L-alanine amidase
JS608_02917	COG1902	pentaerythritol trinitrate reductase activity
JS608_02920	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JS608_02921	COG0745	RESPONSE REGULATOR receiver
JS608_02922	COG0750	zinc metalloprotease
JS608_02925	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
JS608_02927	COG0142	geranyltranstransferase activity
JS608_02929	COG1570	exodeoxyribonuclease VII activity
JS608_02932	COG1302	Protein conserved in bacteria
JS608_02933	COG0439	Biotin carboxylase
JS608_02934	COG0511	ligase activity, forming carbon-carbon bonds
JS608_02942	COG3854	ATPases associated with a variety of cellular activities
JS608_02945	COG0006	proline dipeptidase activity
JS608_02947	COG3872	metal-dependent enzyme
JS608_02949	COG1752	Esterase of the alpha-beta hydrolase superfamily
JS608_02952	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JS608_02956	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JS608_02959	COG1396	sequence-specific DNA binding
JS608_02961	COG0681	Belongs to the peptidase S26 family
JS608_02966	COG4940	Competence protein ComGF
JS608_02968	COG4970	Tfp pilus assembly protein FimT
JS608_02969	COG4537	Required for transformation and DNA binding
JS608_02970	COG1459	type II secretion system
JS608_02971	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JS608_02972	COG0598	Magnesium transport protein CorA
JS608_02973	COG1253	flavin adenine dinucleotide binding
JS608_02974	COG1366	Belongs to the anti-sigma-factor antagonist family
JS608_02976	COG1393	Belongs to the ArsC family
JS608_02978	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JS608_02980	COG0011	TIGRFAM Protein of
JS608_02982	COG2866	Carboxypeptidase
JS608_02983	COG1940	carbohydrate kinase activity
JS608_02984	COG1757	Na H antiporter
JS608_02986	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JS608_02989	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JS608_02990	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JS608_02991	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
JS608_02992	COG0581	inorganic phosphate transmembrane transporter activity
JS608_02993	COG0573	inorganic phosphate transmembrane transporter activity
JS608_02994	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JS608_02995	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JS608_02996	COG0768	penicillin binding
JS608_02997	COG0477	Major facilitator Superfamily
JS608_02998	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JS608_02999	COG2839	Protein conserved in bacteria
JS608_03000	COG5521	maltodextrose utilization protein MalA
JS608_03001	COG1388	LysM domain
JS608_03003	COG4709	membrane
JS608_03004	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
JS608_03005	COG0735	belongs to the Fur family
JS608_03006	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JS608_03009	COG0513	Belongs to the DEAD box helicase family
JS608_03012	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JS608_03013	COG2384	SAM-dependent methyltransferase
JS608_03014	COG2010	Cytochrome c
JS608_03015	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JS608_03016	COG0358	DNA primase activity
JS608_03019	COG0517	IMP dehydrogenase activity
JS608_03020	COG0751	glycine-tRNA ligase activity
JS608_03024	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JS608_03025	COG0295	cytidine deaminase activity
JS608_03026	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JS608_03028	COG1480	7TM receptor with intracellular HD hydrolase
JS608_03029	COG1702	phosphate starvation-inducible protein PhoH
JS608_03030	COG0561	phosphatase activity
JS608_03033	COG4864	UPF0365 protein
JS608_03034	COG1030	water channel activity
JS608_03035	COG1610	YqeY-like protein
JS608_03038	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JS608_03039	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JS608_03045	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JS608_03048	COG0860	N-Acetylmuramoyl-L-alanine amidase
JS608_03051	COG1466	dna polymerase III delta subunit
JS608_03053	COG2131	deaminase
JS608_03054	COG1555	photosystem II stabilization
JS608_03054	COG1596	polysaccharide export
JS608_03055	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JS608_03056	COG2226	methyltransferase
JS608_03057	COG0799	negative regulation of ribosome biogenesis
JS608_03058	COG1713	HD superfamily hydrolase involved in NAD metabolism
JS608_03060	COG1534	Rna-binding protein
JS608_03061	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JS608_03062	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JS608_03063	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
JS608_03065	COG2755	lipolytic protein G-D-S-L family
JS608_03067	COG0398	Pfam SNARE associated Golgi protein
JS608_03072	COG2207	Transcriptional regulator
JS608_03072	COG3708	Transcriptional regulator
JS608_03073	COG0563	adenylate kinase activity
JS608_03075	COG2814	Major facilitator Superfamily
JS608_03076	COG0456	acetyltransferase
JS608_03077	COG2318	DinB family
JS608_03079	COG0561	phosphatase activity
JS608_03080	COG0561	phosphatase activity
JS608_03082	COG1482	cell wall glycoprotein biosynthetic process
JS608_03083	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JS608_03083	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JS608_03083	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JS608_03084	COG3711	transcriptional antiterminator
JS608_03084	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JS608_03087	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JS608_03088	COG0583	DNA-binding transcription factor activity
JS608_03089	COG2814	Major facilitator Superfamily
JS608_03090	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JS608_03090	COG2124	cytochrome p450
JS608_03091	COG1309	transcriptional regulator
JS608_03092	COG2226	methyltransferase
JS608_03094	COG2116	formate transmembrane transporter activity
JS608_03095	COG5609	conserved protein (DUF2294)
JS608_03096	COG3383	formate dehydrogenase (NAD+) activity
JS608_03097	COG3383	formate dehydrogenase (NAD+) activity
JS608_03098	COG2427	Protein of unknown function (DUF1641)
JS608_03100	COG0626	cystathionine gamma-synthase activity
JS608_03101	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JS608_03106	COG0768	penicillin binding
JS608_03109	COG0826	peptidase U32
JS608_03110	COG0826	peptidase U32
JS608_03111	COG4122	O-methyltransferase activity
JS608_03112	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JS608_03115	COG4472	Bacterial protein of unknown function (DUF965)
JS608_03117	COG0628	permease
JS608_03118	COG1126	abc transporter atp-binding protein
JS608_03119	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JS608_03120	COG0765	amino acid transport
JS608_03121	COG0765	amino acid transport
JS608_03124	COG3881	PFAM PRC-barrel domain
JS608_03126	COG0457	Tetratricopeptide repeat
JS608_03128	COG1104	cysteine desulfurase activity
JS608_03129	COG1959	2 iron, 2 sulfur cluster binding
JS608_03130	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JS608_03131	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JS608_03137	COG3103	Sh3 type 3 domain protein
JS608_03137	COG0860	N-Acetylmuramoyl-L-alanine amidase
JS608_03137	COG4991	sh3 domain protein
JS608_03139	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JS608_03141	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JS608_03141	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
JS608_03142	COG5416	Lipopolysaccharide assembly protein A domain
JS608_03143	COG0490	domain, Protein
JS608_03144	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JS608_03144	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JS608_03146	COG2244	polysaccharide biosynthetic process
JS608_03147	COG2323	membrane
JS608_03149	COG1862	Preprotein translocase
JS608_03158	COG1388	LysM domain
JS608_03160	COG0157	Belongs to the NadC ModD family
JS608_03161	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JS608_03162	COG1104	cysteine desulfurase activity
JS608_03163	COG1827	regulation of RNA biosynthetic process
JS608_03164	COG0077	Prephenate dehydratase
JS608_03167	COG3290	protein histidine kinase activity
JS608_03168	COG0211	Belongs to the bacterial ribosomal protein bL27 family
JS608_03169	COG2868	ribosomal protein
JS608_03171	COG1994	Peptidase M50
JS608_03172	COG0739	heme binding
JS608_03173	COG2894	cell division
JS608_03175	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
JS608_03177	COG1077	Cell shape determining protein MreB Mrl
JS608_03181	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
JS608_03182	COG0285	dihydrofolate synthase activity
JS608_03183	COG0525	valine-tRNA ligase activity
JS608_03185	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JS608_03186	COG1388	LysM domain
JS608_03188	COG0113	porphobilinogen synthase activity
JS608_03189	COG1587	Uroporphyrinogen-III synthase
JS608_03191	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JS608_03195	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JS608_03196	COG0470	DNA polymerase III
JS608_03196	COG1067	ATP-dependent peptidase activity
JS608_03199	COG1477	protein flavinylation
JS608_03199	COG0457	Tetratricopeptide repeat
JS608_03202	COG0473	3-isopropylmalate dehydrogenase activity
JS608_03205	COG0440	acetolactate synthase activity
JS608_03211	COG0622	Phosphoesterase
JS608_03212	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JS608_03214	COG5401	PFAM Sporulation and spore germination
JS608_03216	COG1846	Transcriptional regulator
JS608_03217	COG2197	response regulator
JS608_03218	COG0824	Thioesterase
JS608_03219	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JS608_03220	COG1053	succinate dehydrogenase
JS608_03221	COG2009	succinate dehydrogenase
JS608_03222	COG1719	4-vinyl reductase, 4VR
JS608_03223	COG0527	aspartate kinase activity
JS608_03225	COG3118	belongs to the thioredoxin family
JS608_03226	COG3534	alpha-L-arabinofuranosidase
JS608_03227	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
JS608_03228	COG2086	electron transfer activity
JS608_03229	COG1024	Enoyl-CoA hydratase
JS608_03230	COG1309	transcriptional regulator
JS608_03231	COG0318	PFAM AMP-dependent synthetase and ligase
JS608_03233	COG3766	membrane
JS608_03235	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JS608_03235	COG1796	DNA polymerase
JS608_03236	COG1286	toxin biosynthetic process
JS608_03239	COG0072	phenylalanine-tRNA ligase activity
JS608_03239	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JS608_03240	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JS608_03241	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JS608_03243	COG3835	regulator
JS608_03244	COG0277	FAD linked oxidase domain protein
JS608_03245	COG0247	lactate metabolic process
JS608_03246	COG1966	Carbon starvation protein
JS608_03247	COG3534	alpha-L-arabinofuranosidase
JS608_03248	COG0395	ABC-type sugar transport system, permease component
JS608_03249	COG1175	transmembrane transport
JS608_03250	COG1653	transport
JS608_03252	COG0647	UMP catabolic process
JS608_03253	COG0235	Class ii aldolase
JS608_03254	COG1069	ribulokinase activity
JS608_03255	COG2160	L-arabinose isomerase activity
JS608_03257	COG1363	Peptidase, m42
JS608_03259	COG3326	Membrane
JS608_03260	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JS608_03262	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JS608_03263	COG1346	cytolysis
JS608_03264	COG1380	Effector of murein hydrolase LrgA
JS608_03265	COG3279	Response regulator of the LytR AlgR family
JS608_03266	COG3275	phosphorelay sensor kinase activity
JS608_03267	COG1011	Hydrolase
JS608_03270	COG0398	Pfam SNARE associated Golgi protein
JS608_03271	COG1484	DNA-dependent DNA replication
JS608_03272	COG3611	Membrane attachment protein
JS608_03275	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JS608_03276	COG1733	regulation of RNA biosynthetic process
JS608_03277	COG2814	Major facilitator Superfamily
JS608_03278	COG0656	L-ascorbic acid biosynthetic process
JS608_03279	COG0237	dephospho-CoA kinase activity
JS608_03280	COG1971	Probably functions as a manganese efflux pump
JS608_03281	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
JS608_03282	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JS608_03282	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JS608_03283	COG5002	protein histidine kinase activity
JS608_03284	COG0745	RESPONSE REGULATOR receiver
JS608_03286	COG0538	isocitrate dehydrogenase activity
JS608_03287	COG0372	Belongs to the citrate synthase family
JS608_03290	COG0628	permease
JS608_03291	COG3030	protein affecting phage T7 exclusion by the F plasmid
JS608_03292	COG0469	pyruvate kinase activity
JS608_03296	COG0281	malic enzyme
JS608_03297	COG0587	DNA-directed DNA polymerase activity
JS608_03301	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
JS608_03303	COG4109	DRTGG domain
JS608_03305	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_03309	COG0521	Mo-molybdopterin cofactor biosynthetic process
JS608_03311	COG0827	DNA restriction-modification system
JS608_03312	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JS608_03313	COG3874	Sporulation protein YtfJ
JS608_03315	COG1714	RDD family
JS608_03316	COG0616	signal peptide processing
JS608_03317	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JS608_03318	COG1574	metal-dependent hydrolase with the TIM-barrel fold
JS608_03319	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JS608_03322	COG1104	cysteine desulfurase activity
JS608_03323	COG1114	Component of the transport system for branched-chain amino acids
JS608_03325	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JS608_03326	COG1309	transcriptional regulator
JS608_03327	COG1956	GAF domain-containing protein
JS608_03328	COG2199	diguanylate cyclase activity
JS608_03328	COG2203	Gaf domain
JS608_03330	COG1012	belongs to the aldehyde dehydrogenase family
JS608_03332	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JS608_03332	COG1017	nitric oxide dioxygenase activity
JS608_03334	COG0693	protein deglycase activity
JS608_03338	COG1378	Sugar-specific transcriptional regulator TrmB
JS608_03342	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JS608_03343	COG0454	-acetyltransferase
JS608_03344	COG0517	IMP dehydrogenase activity
JS608_03345	COG0123	including yeast histone deacetylase and acetoin utilization protein
JS608_03346	COG1360	Flagellar Motor Protein
JS608_03347	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JS608_03348	COG1609	Transcriptional regulator
JS608_03349	COG1605	Chorismate mutase
JS608_03349	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
JS608_03350	COG3118	belongs to the thioredoxin family
JS608_03351	COG4980	gas vesicle protein
JS608_03352	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JS608_03354	COG1674	ftsk spoiiie
JS608_03355	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JS608_03357	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JS608_03359	COG1363	Peptidase, m42
JS608_03360	COG5584	Small secreted protein
JS608_03361	COG0281	malic enzyme
JS608_03362	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JS608_03365	COG0510	thiamine kinase activity
JS608_03366	COG1597	lipid kinase activity
JS608_03368	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JS608_03369	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JS608_03370	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JS608_03371	COG2252	PERMEase
JS608_03372	COG4473	ABC transporter
JS608_03373	COG1131	(ABC) transporter
JS608_03374	COG1349	DNA-binding transcription factor activity
JS608_03375	COG1187	pseudouridine synthase activity
JS608_03376	COG2244	polysaccharide biosynthetic process
JS608_03377	COG2081	HI0933 family
JS608_03378	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JS608_03380	COG1609	Transcriptional regulator
JS608_03381	COG1653	transport
JS608_03382	COG1175	transmembrane transport
JS608_03383	COG0395	ABC-type sugar transport system, permease component
JS608_03384	COG1486	melibiose metabolic process
JS608_03386	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JS608_03389	COG1366	Belongs to the anti-sigma-factor antagonist family
JS608_03389	COG2202	Pas domain
JS608_03390	COG2814	Major facilitator Superfamily
JS608_03391	COG5522	Integral membrane protein (intg_mem_TP0381)
JS608_03392	COG0577	efflux transmembrane transporter activity
JS608_03393	COG1136	(ABC) transporter
JS608_03394	COG2205	protein histidine kinase activity
JS608_03395	COG0745	RESPONSE REGULATOR receiver
JS608_03396	COG0577	efflux transmembrane transporter activity
JS608_03397	COG1136	(ABC) transporter
JS608_03401	COG1131	(ABC) transporter
JS608_03402	COG1725	Transcriptional regulator
JS608_03405	COG0640	Transcriptional regulator
JS608_03407	COG1242	4 iron, 4 sulfur cluster binding
JS608_03408	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JS608_03410	COG0584	glycerophosphoryl diester phosphodiesterase
JS608_03412	COG2267	carboxylic ester hydrolase activity
JS608_03414	COG1113	amino acid transport
JS608_03415	COG0367	asparagine synthase
JS608_03419	COG1506	peptidase
JS608_03420	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JS608_03421	COG1116	anion transmembrane transporter activity
JS608_03422	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JS608_03423	COG0494	nUDIX hydrolase
JS608_03424	COG4824	toxin secretion phage lysis holin
JS608_03425	COG0783	Belongs to the Dps family
JS608_03430	COG0288	reversible hydration of carbon dioxide
JS608_03432	COG1271	oxidase subunit
JS608_03433	COG1294	oxidase, subunit
JS608_03437	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JS608_03438	COG0596	Alpha beta hydrolase
JS608_03440	COG1169	isochorismate synthase
JS608_03441	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JS608_03442	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
JS608_03467	COG3859	Proton-coupled thiamine transporter YuaJ
JS608_03468	COG2268	Band 7 protein
JS608_03469	COG1585	Membrane protein implicated in regulation of membrane protease activity
JS608_03470	COG2318	DinB family
JS608_03472	COG1454	alcohol dehydrogenase
JS608_03473	COG1012	belongs to the aldehyde dehydrogenase family
JS608_03474	COG1510	regulation of RNA biosynthetic process
JS608_03476	COG0569	domain protein
JS608_03477	COG1705	Flagellar rod assembly protein muramidase FlgJ
JS608_03478	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JS608_03478	COG1017	nitric oxide dioxygenase activity
JS608_03483	COG0628	permease
JS608_03484	COG0673	inositol 2-dehydrogenase activity
JS608_03485	COG0693	protein deglycase activity
JS608_03486	COG0840	transmembrane signaling receptor activity
JS608_03487	COG0840	transmembrane signaling receptor activity
JS608_03488	COG0840	transmembrane signaling receptor activity
JS608_03489	COG0840	transmembrane signaling receptor activity
JS608_03492	COG2070	2-Nitropropane dioxygenase
JS608_03493	COG0432	Pfam Uncharacterised protein family UPF0047
JS608_03494	COG0366	Alpha amylase catalytic
JS608_03495	COG1253	flavin adenine dinucleotide binding
JS608_03496	COG2738	Putative neutral zinc metallopeptidase
JS608_03499	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JS608_03503	COG0431	NADPH-dependent FMN reductase
JS608_03504	COG1335	isochorismatase
JS608_03505	COG1979	alcohol dehydrogenase
JS608_03506	COG1979	alcohol dehydrogenase
JS608_03507	COG2155	Conserved Protein
JS608_03508	COG1098	S1 RNA binding domain
JS608_03509	COG0436	Aminotransferase
JS608_03510	COG1522	sequence-specific DNA binding
JS608_03511	COG2267	carboxylic ester hydrolase activity
JS608_03513	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JS608_03514	COG2205	protein histidine kinase activity
JS608_03516	COG5018	Exonuclease
JS608_03517	COG2814	Major facilitator Superfamily
JS608_03518	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JS608_03519	COG3011	Protein conserved in bacteria
JS608_03521	COG3290	protein histidine kinase activity
JS608_03522	COG4565	transcriptional regulatory protein
JS608_03523	COG1744	ABC transporter substrate-binding protein PnrA-like
JS608_03524	COG3845	ABC transporter
JS608_03525	COG4603	Belongs to the binding-protein-dependent transport system permease family
JS608_03526	COG1079	Belongs to the binding-protein-dependent transport system permease family
JS608_03528	COG2111	Na H antiporter
JS608_03528	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JS608_03529	COG2111	Na H antiporter
JS608_03530	COG1006	Multisubunit Na H antiporter MnhC subunit
JS608_03531	COG0651	ATP synthesis coupled electron transport
JS608_03532	COG1863	multisubunit Na H antiporter MnhE subunit
JS608_03533	COG2212	antiporter activity
JS608_03534	COG1320	monovalent cation:proton antiporter activity
JS608_03535	COG2050	protein possibly involved in aromatic compounds catabolism
JS608_03536	COG2197	response regulator
JS608_03537	COG4585	Histidine kinase
JS608_03539	COG0142	geranyltranstransferase activity
JS608_03543	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
JS608_03544	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JS608_03545	COG1335	isochorismatase
JS608_03546	COG5506	Protein of unknown function (DUF1694)
JS608_03549	COG0628	permease
JS608_03551	COG1418	mRNA catabolic process
JS608_03552	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_03554	COG1511	domain protein
JS608_03555	COG1674	ftsk spoiiie
JS608_03555	COG0433	COG0433 Predicted ATPase
JS608_03556	COG4499	WXG100 protein secretion system (Wss), protein YukC
JS608_03557	COG5417	Belongs to the EsaB family
JS608_03558	COG4842	Belongs to the WXG100 family
JS608_03559	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
JS608_03559	COG2508	Transcriptional regulator
JS608_03560	COG0686	Belongs to the AlaDH PNT family
JS608_03561	COG5634	Uncharacterized conserved protein (DUF2278)
JS608_03562	COG3251	PFAM MbtH domain protein
JS608_03563	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JS608_03564	COG1535	isochorismatase
JS608_03564	COG3433	isochorismatase activity
JS608_03565	COG1021	2,3-dihydroxybenzoate-AMP ligase
JS608_03566	COG1169	isochorismate synthase
JS608_03567	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_03568	COG2819	hydrolase of the alpha beta superfamily
JS608_03569	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JS608_03570	COG1268	BioY protein
JS608_03571	COG2056	Na+-H+ antiporter family
JS608_03573	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
JS608_03574	COG3584	3D domain protein
JS608_03576	COG1252	NADH dehydrogenase
JS608_03582	COG1131	(ABC) transporter
JS608_03587	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
JS608_03588	COG0316	Belongs to the HesB IscA family
JS608_03590	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JS608_03592	COG1252	NADH dehydrogenase
JS608_03593	COG4837	Protein of unknown function (DUF1462)
JS608_03594	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
JS608_03595	COG1506	peptidase
JS608_03595	COG4946	Tricorn protease homolog
JS608_03595	COG0823	Involved in the tonB-independent uptake of proteins
JS608_03597	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
JS608_03598	COG0460	homoserine dehydrogenase
JS608_03599	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JS608_03600	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JS608_03601	COG0647	UMP catabolic process
JS608_03602	COG2445	Protein of unknown function DUF86
JS608_03603	COG4470	Protein conserved in bacteria
JS608_03605	COG0739	heme binding
JS608_03607	COG0737	Belongs to the 5'-nucleotidase family
JS608_03608	COG0730	response to heat
JS608_03609	COG1801	Protein of unknown function DUF72
JS608_03612	COG2508	Transcriptional regulator
JS608_03616	COG2814	Major facilitator Superfamily
JS608_03617	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JS608_03618	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JS608_03619	COG2356	endonuclease I
JS608_03620	COG3842	ATPase activity
JS608_03621	COG2188	Transcriptional regulator
JS608_03622	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JS608_03623	COG0395	ABC-type sugar transport system, permease component
JS608_03624	COG1175	transmembrane transport
JS608_03625	COG1653	transport
JS608_03626	COG2222	sugar isomerase
JS608_03627	COG0789	Transcriptional regulator
JS608_03629	COG0322	excinuclease ABC activity
JS608_03630	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JS608_03631	COG3409	Peptidoglycan-binding domain 1 protein
JS608_03632	COG0719	Fe-S assembly protein
JS608_03633	COG0822	iron-sulfur transferase activity
JS608_03634	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JS608_03635	COG0719	Fe-S assembly protein
JS608_03636	COG0396	ATPase activity
JS608_03637	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JS608_03638	COG1464	Belongs to the NlpA lipoprotein family
JS608_03639	COG2011	ABC-type metal ion transport system permease component
JS608_03640	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JS608_03642	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JS608_03643	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JS608_03646	COG1393	Belongs to the ArsC family
JS608_03647	COG1960	acyl-CoA dehydrogenase activity
JS608_03648	COG0183	Belongs to the thiolase family
JS608_03649	COG1250	3-hydroxyacyl-CoA dehydrogenase
JS608_03649	COG1024	Enoyl-CoA hydratase
JS608_03651	COG0477	Major facilitator Superfamily
JS608_03653	COG5577	PFAM Coat F domain
JS608_03654	COG1846	Transcriptional regulator
JS608_03655	COG0477	Major facilitator Superfamily
JS608_03656	COG0583	DNA-binding transcription factor activity
JS608_03660	COG1120	ATPase activity
JS608_03663	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_03664	COG0783	Belongs to the Dps family
JS608_03665	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JS608_03666	COG0745	RESPONSE REGULATOR receiver
JS608_03667	COG2770	Histidine kinase
JS608_03667	COG2205	protein histidine kinase activity
JS608_03669	COG1309	transcriptional regulator
JS608_03670	COG0114	fumarate hydratase activity
JS608_03672	COG0697	spore germination
JS608_03673	COG0814	amino acid
JS608_03675	COG2197	response regulator
JS608_03676	COG4585	Histidine kinase
JS608_03677	COG4758	membrane
JS608_03678	COG3595	metallopeptidase activity
JS608_03679	COG1842	Phage shock protein A
JS608_03680	COG4758	membrane
JS608_03681	COG2814	Major facilitator Superfamily
JS608_03682	COG2096	Adenosyltransferase
JS608_03683	COG1120	ATPase activity
JS608_03684	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JS608_03685	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JS608_03686	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_03687	COG3386	PFAM SMP-30 Gluconolaconase
JS608_03688	COG2205	protein histidine kinase activity
JS608_03689	COG0745	RESPONSE REGULATOR receiver
JS608_03690	COG1191	sigma factor activity
JS608_03692	COG2140	Oxalate decarboxylase
JS608_03694	COG1120	ATPase activity
JS608_03695	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JS608_03696	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JS608_03697	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JS608_03698	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
JS608_03699	COG0531	amino acid
JS608_03701	COG1988	membrane-bound metal-dependent
JS608_03702	COG1368	sulfuric ester hydrolase activity
JS608_03703	COG1910	domain protein
JS608_03704	COG0725	ABC transporter, periplasmic molybdate-binding protein
JS608_03705	COG4149	molybdate abc transporter
JS608_03706	COG2197	response regulator
JS608_03707	COG3850	Histidine kinase
JS608_03708	COG1131	(ABC) transporter
JS608_03710	COG0842	Transport permease protein
JS608_03711	COG0656	L-ascorbic acid biosynthetic process
JS608_03715	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JS608_03716	COG3973	AAA domain
JS608_03717	COG2860	membrane
JS608_03719	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
JS608_03720	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JS608_03721	COG2217	Heavy metal translocating P-type atpase
JS608_03722	COG2217	Heavy metal translocating P-type atpase
JS608_03723	COG2608	mercury ion transmembrane transporter activity
JS608_03724	COG1937	Protein conserved in bacteria
JS608_03725	COG0673	inositol 2-dehydrogenase activity
JS608_03727	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JS608_03728	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
JS608_03729	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JS608_03730	COG1126	abc transporter atp-binding protein
JS608_03731	COG0765	amino acid transport
JS608_03732	COG0765	amino acid transport
JS608_03733	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JS608_03734	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JS608_03735	COG0454	-acetyltransferase
JS608_03736	COG0583	DNA-binding transcription factor activity
JS608_03737	COG1028	Short-chain dehydrogenase reductase Sdr
JS608_03738	COG2732	(Barnase) inhibitor
JS608_03741	COG0557	exoribonuclease II activity
JS608_03742	COG0557	exoribonuclease II activity
JS608_03743	COG1647	Serine aminopeptidase, S33
JS608_03744	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JS608_03745	COG1476	TRANSCRIPTIONal
JS608_03746	COG1396	sequence-specific DNA binding
JS608_03747	COG1396	sequence-specific DNA binding
JS608_03748	COG1733	regulation of RNA biosynthetic process
JS608_03753	COG1131	(ABC) transporter
JS608_03754	COG1174	glycine betaine transport
JS608_03755	COG1732	Glycine betaine
JS608_03756	COG1174	glycine betaine transport
JS608_03757	COG0517	IMP dehydrogenase activity
JS608_03757	COG1125	glycine betaine transport
JS608_03758	COG1510	regulation of RNA biosynthetic process
JS608_03759	COG1174	glycine betaine transport
JS608_03760	COG1732	Glycine betaine
JS608_03761	COG1174	glycine betaine transport
JS608_03762	COG0517	IMP dehydrogenase activity
JS608_03762	COG1125	glycine betaine transport
JS608_03763	COG1510	regulation of RNA biosynthetic process
JS608_03764	COG2095	MarC family integral membrane protein
JS608_03765	COG3064	Membrane
JS608_03766	COG4640	response to antibiotic
JS608_03767	COG0456	acetyltransferase
JS608_03770	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JS608_03773	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JS608_03774	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JS608_03775	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JS608_03777	COG2234	aminopeptidase activity
JS608_03781	COG0126	phosphoglycerate kinase activity
JS608_03782	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JS608_03783	COG2390	Transcriptional regulator
JS608_03785	COG2814	Major facilitator Superfamily
JS608_03786	COG1609	Transcriptional regulator
JS608_03787	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JS608_03789	COG0583	DNA-binding transcription factor activity
JS608_03790	COG0697	spore germination
JS608_03791	COG1113	amino acid transport
JS608_03793	COG1737	Transcriptional regulator
JS608_03794	COG1070	Carbohydrate kinase
JS608_03799	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JS608_03800	COG2186	Transcriptional regulator
JS608_03801	COG1620	l-lactate permease
JS608_03802	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
JS608_03804	COG5039	Polysaccharide pyruvyl transferase
JS608_03805	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JS608_03806	COG0110	maltose O-acetyltransferase activity
JS608_03807	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JS608_03808	COG2244	polysaccharide biosynthetic process
JS608_03809	COG1216	Glycosyl transferase, family 2
JS608_03810	COG5039	Polysaccharide pyruvyl transferase
JS608_03811	COG1216	Glycosyl transferase, family 2
JS608_03813	COG0438	transferase activity, transferring glycosyl groups
JS608_03814	COG0438	transferase activity, transferring glycosyl groups
JS608_03815	COG1215	transferase activity, transferring glycosyl groups
JS608_03816	COG0438	transferase activity, transferring glycosyl groups
JS608_03817	COG1086	Polysaccharide biosynthesis protein
JS608_03818	COG0489	protein tyrosine kinase activity
JS608_03819	COG3944	biosynthesis protein
JS608_03820	COG1396	sequence-specific DNA binding
JS608_03821	COG2272	Belongs to the type-B carboxylesterase lipase family
JS608_03823	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JS608_03824	COG2364	Membrane
JS608_03825	COG0456	acetyltransferase
JS608_03826	COG3479	Phenolic acid decarboxylase
JS608_03834	COG2223	nitrite transmembrane transporter activity
JS608_03835	COG1609	Transcriptional regulator
JS608_03837	COG0583	DNA-binding transcription factor activity
JS608_03839	COG0477	Major facilitator Superfamily
JS608_03839	COG2814	Major facilitator Superfamily
JS608_03841	COG1611	Belongs to the LOG family
JS608_03842	COG1694	Mazg nucleotide pyrophosphohydrolase
JS608_03843	COG0659	secondary active sulfate transmembrane transporter activity
JS608_03844	COG0288	reversible hydration of carbon dioxide
JS608_03845	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JS608_03846	COG4290	ribonuclease
JS608_03847	COG2162	N-hydroxyarylamine O-acetyltransferase activity
JS608_03848	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JS608_03850	COG0391	Required for morphogenesis under gluconeogenic growth conditions
JS608_03852	COG1051	belongs to the nudix hydrolase family
JS608_03853	COG0492	ferredoxin-NADP+ reductase activity
JS608_03854	COG3883	PFAM NLP P60 protein
JS608_03854	COG0791	NLP P60 protein
JS608_03855	COG0457	Tetratricopeptide repeat
JS608_03856	COG5002	protein histidine kinase activity
JS608_03857	COG0745	RESPONSE REGULATOR receiver
JS608_03859	COG1132	(ABC) transporter
JS608_03860	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JS608_03860	COG0140	phosphoribosyl-ATP diphosphatase activity
JS608_03865	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JS608_03868	COG4990	cell redox homeostasis
JS608_03869	COG0110	maltose O-acetyltransferase activity
JS608_03873	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JS608_03875	COG2188	Transcriptional regulator
JS608_03876	COG1309	transcriptional regulator
JS608_03878	COG1950	PFAM Membrane protein of
JS608_03879	COG1983	PspC domain protein
JS608_03880	COG3595	metallopeptidase activity
JS608_03883	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JS608_03885	COG4897	Protein conserved in bacteria
JS608_03886	COG0574	Belongs to the PEP-utilizing enzyme family
JS608_03886	COG3848	Pyruvate phosphate dikinase
JS608_03887	COG1309	transcriptional regulator
JS608_03888	COG2814	Major facilitator Superfamily
JS608_03890	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JS608_03892	COG0793	Belongs to the peptidase S41A family
JS608_03892	COG3409	Peptidoglycan-binding domain 1 protein
JS608_03893	COG3420	alginic acid biosynthetic process
JS608_03894	COG2177	Part of the ABC transporter FtsEX involved in
JS608_03895	COG2884	Cell division ATP-binding protein ftsE
JS608_03896	COG2010	Cytochrome c
JS608_03897	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JS608_03898	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JS608_03900	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JS608_03903	COG1516	flagellar protein fliS
JS608_03904	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
JS608_03905	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JS608_03909	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JS608_03910	COG1256	bacterial-type flagellum assembly
JS608_03910	COG4786	Flagellar basal body rod
JS608_03911	COG3418	PFAM FlgN family protein
JS608_03912	COG2747	anti-sigma28 factor FlgM
JS608_03914	COG1040	competence protein
JS608_03916	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
JS608_03917	COG1307	EDD domain protein, DegV family
JS608_03918	COG2197	response regulator
JS608_03919	COG4585	Histidine kinase
JS608_03920	COG1739	Uncharacterized protein family UPF0029
JS608_03921	COG1316	TRANSCRIPTIONal
JS608_03922	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JS608_03923	COG0438	transferase activity, transferring glycosyl groups
JS608_03924	COG1215	transferase activity, transferring glycosyl groups
JS608_03925	COG3206	protein involved in exopolysaccharide biosynthesis
JS608_03926	COG3307	-O-antigen
JS608_03927	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JS608_03928	COG0297	glycogen (starch) synthase activity
JS608_03928	COG0438	transferase activity, transferring glycosyl groups
JS608_03929	COG2244	polysaccharide biosynthetic process
JS608_03931	COG2247	cell wall binding repeat
JS608_03931	COG0860	N-Acetylmuramoyl-L-alanine amidase
JS608_03932	COG2247	cell wall binding repeat
JS608_03932	COG2385	sporulation resulting in formation of a cellular spore
JS608_03934	COG1316	TRANSCRIPTIONal
JS608_03935	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JS608_03936	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JS608_03937	COG1134	teichoic acid transport
JS608_03938	COG1682	transport, permease protein
JS608_03939	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JS608_03941	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JS608_03942	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
JS608_03943	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JS608_03944	COG4193	domain, Protein
JS608_03945	COG1482	cell wall glycoprotein biosynthetic process
JS608_03946	COG0697	spore germination
JS608_03947	COG0814	amino acid
JS608_03949	COG1215	transferase activity, transferring glycosyl groups
JS608_03950	COG2814	Major facilitator Superfamily
JS608_03951	COG1316	TRANSCRIPTIONal
JS608_03952	COG0561	phosphatase activity
JS608_03953	COG2433	Pfam Transposase IS66
JS608_03954	COG0791	NLP P60 protein
JS608_03956	COG2843	Capsule synthesis protein
JS608_03958	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JS608_03959	COG0697	spore germination
JS608_03960	COG0814	amino acid
JS608_03962	COG1609	Transcriptional regulator
JS608_03963	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JS608_03965	COG1129	ABC transporter
JS608_03966	COG1172	Belongs to the binding-protein-dependent transport system permease family
JS608_03967	COG1879	ABC-type sugar transport system periplasmic component
JS608_03968	COG3103	Sh3 type 3 domain protein
JS608_03969	COG2249	NAD(P)H dehydrogenase (quinone) activity
JS608_03970	COG3527	Alpha-acetolactate decarboxylase
JS608_03971	COG0028	Belongs to the TPP enzyme family
JS608_03972	COG0583	DNA-binding transcription factor activity
JS608_03974	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JS608_03977	COG5337	Spore coat protein CotH
JS608_03979	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JS608_03981	COG0405	Gamma-glutamyltransferase
JS608_03982	COG1522	sequence-specific DNA binding
JS608_03983	COG2059	Chromate
JS608_03984	COG2059	Chromate
JS608_03986	COG0655	NAD(P)H dehydrogenase (quinone) activity
JS608_03987	COG0583	DNA-binding transcription factor activity
JS608_03991	COG5444	nuclease activity
JS608_03995	COG3878	Protein conserved in bacteria
JS608_03996	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JS608_03997	COG4464	protein tyrosine phosphatase activity
JS608_03998	COG0489	protein tyrosine kinase activity
JS608_03999	COG3944	biosynthesis protein
JS608_04001	COG4715	Zinc finger, swim domain protein
JS608_04002	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JS608_04003	COG0561	phosphatase activity
JS608_04004	COG1349	DNA-binding transcription factor activity
JS608_04005	COG0629	single-stranded DNA binding
JS608_04010	COG0457	Tetratricopeptide repeat
JS608_04011	COG4786	Flagellar basal body rod
JS608_04012	COG4786	Flagellar basal body rod
JS608_04013	COG1077	Cell shape determining protein MreB Mrl
JS608_04014	COG1609	Transcriptional regulator
JS608_04015	COG1846	Transcriptional regulator
JS608_04016	COG2814	Major facilitator Superfamily
JS608_04017	COG1953	Uracil, thiamine, allantoin
JS608_04018	COG0477	Major facilitator Superfamily
JS608_04019	COG1335	isochorismatase
JS608_04020	COG0004	ammonium transporteR
JS608_04021	COG0347	Belongs to the P(II) protein family
JS608_04022	COG0772	Belongs to the SEDS family
JS608_04023	COG0671	phosphoesterase, PA-phosphatase related
JS608_04025	COG0739	heme binding
JS608_04026	COG1247	-acetyltransferase
JS608_04029	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JS608_04033	COG1959	2 iron, 2 sulfur cluster binding
JS608_04037	COG0831	urea catabolic process
JS608_04038	COG3237	CsbD-like
JS608_04039	COG1994	Peptidase M50
JS608_04040	COG0457	Tetratricopeptide repeat
JS608_04042	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
JS608_04044	COG2304	oxidoreductase activity
JS608_04045	COG2304	oxidoreductase activity
JS608_04046	COG2385	sporulation resulting in formation of a cellular spore
JS608_04047	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JS608_04049	COG4836	Membrane
JS608_04063	COG0698	ribose 5-phosphate isomerase
JS608_04064	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JS608_04066	COG0009	L-threonylcarbamoyladenylate synthase
JS608_04067	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
JS608_04071	COG2890	protein-(glutamine-N5) methyltransferase activity
JS608_04072	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JS608_04073	COG0346	lactoylglutathione lyase activity
JS608_04074	COG0789	Transcriptional regulator
JS608_04075	COG0679	Auxin Efflux Carrier
JS608_04076	COG0281	malic enzyme
JS608_04080	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JS608_04082	COG0191	fructose-bisphosphate aldolase activity