locus-tag class description E3U39_00010 PF09346 SMI1 / KNR4 family (SUKH-1) E3U39_00020 PF03951 Glutamine synthetase, beta-Grasp domain E3U39_00020 PF00120 Glutamine synthetase, catalytic domain E3U39_00025 PF13411 MerR HTH family regulatory protein E3U39_00030 PF06838 Methionine gamma-lyase E3U39_00035 PF01926 50S ribosome-binding GTPase E3U39_00035 PF13167 GTP-binding GTPase N-terminal E3U39_00035 PF16360 GTP-binding GTPase Middle Region E3U39_00040 PF00004 ATPase family associated with various cellular activities (AAA) E3U39_00040 PF17866 AAA lid domain E3U39_00050 PF05036 Sporulation related domain E3U39_00050 PF01520 N-acetylmuramoyl-L-alanine amidase E3U39_00060 PF00268 Ribonucleotide reductase, small chain E3U39_00065 PF08343 Ribonucleotide reductase N-terminal E3U39_00065 PF00317 Ribonucleotide reductase, all-alpha domain E3U39_00065 PF02867 Ribonucleotide reductase, barrel domain E3U39_00070 PF07972 NrdI Flavodoxin like E3U39_00080 PF14157 YmzC-like protein E3U39_00085 PF17209 Hfq protein E3U39_00095 PF12788 YmaF family E3U39_00105 PF00893 Small Multidrug Resistance protein E3U39_00110 PF00893 Small Multidrug Resistance protein E3U39_00115 PF02566 OsmC-like protein E3U39_00120 PF05908 Poly-gamma-glutamate hydrolase E3U39_00130 PF00082 Subtilase family E3U39_00140 PF06912 Protein of unknown function (DUF1275) E3U39_00145 PF14040 Deoxyribonuclease NucA/NucB E3U39_00150 PF00067 Cytochrome P450 E3U39_00155 PF14765 Polyketide synthase dehydratase E3U39_00155 PF00550 Phosphopantetheine attachment site E3U39_00155 PF08242 Methyltransferase domain E3U39_00155 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_00155 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_00155 PF00975 Thioesterase domain E3U39_00155 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_00160 PF00550 Phosphopantetheine attachment site E3U39_00160 PF14765 Polyketide synthase dehydratase E3U39_00160 PF08659 KR domain E3U39_00160 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_00160 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_00160 PF00668 Condensation domain E3U39_00160 PF00501 AMP-binding enzyme E3U39_00160 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_00160 PF13193 AMP-binding enzyme C-terminal domain E3U39_00165 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_00165 PF14765 Polyketide synthase dehydratase E3U39_00165 PF00550 Phosphopantetheine attachment site E3U39_00165 PF08242 Methyltransferase domain E3U39_00165 PF08659 KR domain E3U39_00165 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_00165 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_00165 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_00165 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_00165 PF08659 KR domain E3U39_00165 PF08242 Methyltransferase domain E3U39_00165 PF00550 Phosphopantetheine attachment site E3U39_00165 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_00165 PF14765 Polyketide synthase dehydratase E3U39_00170 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_00170 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_00170 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_00170 PF08659 KR domain E3U39_00170 PF00550 Phosphopantetheine attachment site E3U39_00170 PF14765 Polyketide synthase dehydratase E3U39_00175 PF08659 KR domain E3U39_00175 PF00668 Condensation domain E3U39_00175 PF13193 AMP-binding enzyme C-terminal domain E3U39_00175 PF14765 Polyketide synthase dehydratase E3U39_00175 PF00501 AMP-binding enzyme E3U39_00175 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_00175 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_00175 PF00550 Phosphopantetheine attachment site E3U39_00175 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_00180 PF00378 Enoyl-CoA hydratase/isomerase E3U39_00185 PF00378 Enoyl-CoA hydratase/isomerase E3U39_00190 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal E3U39_00190 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal E3U39_00195 PF00550 Phosphopantetheine attachment site E3U39_00200 PF00698 Acyl transferase domain E3U39_00205 PF00698 Acyl transferase domain E3U39_00210 PF00698 Acyl transferase domain E3U39_00215 PF00753 Metallo-beta-lactamase superfamily E3U39_00240 PF14659 Phage integrase, N-terminal SAM-like domain E3U39_00240 PF00589 Phage integrase family E3U39_00250 PF08676 MutL C terminal dimerisation domain E3U39_00250 PF01119 DNA mismatch repair protein, C-terminal domain E3U39_00255 PF01624 MutS domain I E3U39_00255 PF05188 MutS domain II E3U39_00255 PF05190 MutS family domain IV E3U39_00255 PF00488 MutS domain V E3U39_00255 PF05192 MutS domain III E3U39_00260 PF10628 Outer spore coat protein E (CotE) E3U39_00265 PF06133 Control of competence regulator ComK, YlbF/YmcA E3U39_00270 PF01938 TRAM domain E3U39_00270 PF00919 Uncharacterized protein family UPF0004 E3U39_00270 PF04055 Radical SAM superfamily E3U39_00275 PF00155 Aminotransferase class I and II E3U39_00280 PF08240 Alcohol dehydrogenase GroES-like domain E3U39_00280 PF00107 Zinc-binding dehydrogenase E3U39_00285 PF04232 Stage V sporulation protein S (SpoVS) E3U39_00290 PF13277 YmdB-like protein E3U39_00295 PF12072 Domain of unknown function (DUF3552) E3U39_00295 PF01966 HD domain E3U39_00295 PF00013 KH domain E3U39_00300 PF00144 Beta-lactamase E3U39_00305 PF00154 recA bacterial DNA recombination protein E3U39_00310 PF00994 Probable molybdopterin binding domain E3U39_00310 PF18146 Damage-inducible protein CinA KH domain E3U39_00310 PF02464 Competence-damaged protein E3U39_00315 PF01066 CDP-alcohol phosphatidyltransferase E3U39_00320 PF13464 Domain of unknown function (DUF4115) E3U39_00325 PF11868 Protein of unknown function (DUF3388) E3U39_00330 PF11588 Protein of unknown function (DUF3243) E3U39_00340 PF05193 Peptidase M16 inactive domain E3U39_00340 PF00675 Insulinase (Peptidase family M16) E3U39_00345 PF05193 Peptidase M16 inactive domain E3U39_00350 PF03176 MMPL family E3U39_00355 PF01047 MarR family E3U39_00360 PF07690 Major Facilitator Superfamily E3U39_00365 PF07702 UTRA domain E3U39_00365 PF00392 Bacterial regulatory proteins, gntR family E3U39_00370 PF17854 FtsK alpha domain E3U39_00370 PF09397 Ftsk gamma domain E3U39_00370 PF01580 FtsK/SpoIIIE family E3U39_00375 PF14035 YlzJ-like protein E3U39_00380 PF00574 Clp protease E3U39_00385 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain E3U39_00385 PF17770 Ribonuclease J C-terminal domain E3U39_00385 PF00753 Metallo-beta-lactamase superfamily E3U39_00390 PF00701 Dihydrodipicolinate synthetase family E3U39_00395 PF00696 Amino acid kinase family E3U39_00395 PF13840 ACT domain E3U39_00400 PF02774 Semialdehyde dehydrogenase, dimerisation domain E3U39_00400 PF01118 Semialdehyde dehydrogenase, NAD binding domain E3U39_00405 PF02441 Flavoprotein E3U39_00410 PF16924 Dipicolinate synthase subunit A N-terminal domain E3U39_00410 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E3U39_00415 PF05239 PRC-barrel domain E3U39_00420 PF05193 Peptidase M16 inactive domain E3U39_00420 PF00675 Insulinase (Peptidase family M16) E3U39_00425 PF01522 Polysaccharide deacetylase E3U39_00430 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E3U39_00430 PF01138 3' exoribonuclease family, domain 1 E3U39_00430 PF03725 3' exoribonuclease family, domain 2 E3U39_00430 PF00575 S1 RNA binding domain E3U39_00430 PF00013 KH domain E3U39_00435 PF00312 Ribosomal protein S15 E3U39_00440 PF01687 Riboflavin kinase E3U39_00440 PF06574 FAD synthetase E3U39_00445 PF16198 tRNA pseudouridylate synthase B C-terminal domain E3U39_00445 PF01509 TruB family pseudouridylate synthase (N terminal domain) E3U39_00450 PF02033 Ribosome-binding factor A E3U39_00455 PF04456 Protein of unknown function (DUF503) E3U39_00460 PF00009 Elongation factor Tu GTP binding domain E3U39_00460 PF11987 Translation-initiation factor 2 E3U39_00460 PF04760 Translation initiation factor IF-2, N-terminal region E3U39_00465 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family E3U39_00470 PF04296 Protein of unknown function (DUF448) E3U39_00475 PF00575 S1 RNA binding domain E3U39_00475 PF08529 NusA N-terminal domain E3U39_00475 PF13184 NusA-like KH domain E3U39_00480 PF17384 RimP C-terminal SH3 domain E3U39_00480 PF02576 RimP N-terminal domain E3U39_00485 PF14579 Helix-hairpin-helix motif E3U39_00485 PF02811 PHP domain E3U39_00485 PF00929 Exonuclease E3U39_00485 PF07733 Bacterial DNA polymerase III alpha NTPase domain E3U39_00485 PF14480 DNA polymerase III polC-type N-terminus I E3U39_00485 PF11490 DNA polymerase III polC-type N-terminus II E3U39_00485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E3U39_00490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E3U39_00490 PF03129 Anticodon binding domain E3U39_00490 PF04073 Aminoacyl-tRNA editing domain E3U39_00495 PF17820 PDZ domain E3U39_00495 PF02163 Peptidase family M50 E3U39_00500 PF13288 DXP reductoisomerase C-terminal domain E3U39_00500 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E3U39_00500 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E3U39_00510 PF01255 Putative undecaprenyl diphosphate synthase E3U39_00515 PF01765 Ribosome recycling factor E3U39_00520 PF00696 Amino acid kinase family E3U39_00525 PF00889 Elongation factor TS E3U39_00530 PF00318 Ribosomal protein S2 E3U39_00540 PF04542 Sigma-70 region 2 E3U39_00540 PF04545 Sigma-70, region 4 E3U39_00540 PF04539 Sigma-70 region 3 E3U39_00545 PF03975 CheD chemotactic sensory transduction E3U39_00550 PF04509 CheC-like family E3U39_00555 PF01584 CheW-like domain E3U39_00560 PF01584 CheW-like domain E3U39_00560 PF01627 Hpt domain E3U39_00560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_00560 PF02895 Signal transducing histidine kinase, homodimeric domain E3U39_00560 PF07194 P2 response regulator binding domain E3U39_00565 PF01339 CheB methylesterase E3U39_00565 PF00072 Response regulator receiver domain E3U39_00570 PF10609 NUBPL iron-transfer P-loop NTPase E3U39_00575 PF00448 SRP54-type protein, GTPase domain E3U39_00580 PF00771 FHIPEP family E3U39_00585 PF01312 FlhB HrpN YscU SpaS Family E3U39_00590 PF01311 Bacterial export proteins, family 1 E3U39_00595 PF01313 Bacterial export proteins, family 3 E3U39_00600 PF00813 FliP family E3U39_00605 PF04347 Flagellar biosynthesis protein, FliO E3U39_00610 PF00072 Response regulator receiver domain E3U39_00615 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E3U39_00615 PF04509 CheC-like family E3U39_00620 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E3U39_00620 PF02154 Flagellar motor switch protein FliM E3U39_00625 PF03748 Flagellar basal body-associated protein FliL E3U39_00630 PF06289 Flagellar and Swarming motility proteins E3U39_00635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E3U39_00635 PF00460 Flagella basal body rod protein E3U39_00640 PF03963 Flagellar hook capping protein - N-terminal region E3U39_00645 PF02120 Flagellar hook-length control protein FliK E3U39_00650 PF03448 MgtE intracellular N domain E3U39_00655 PF02050 Flagellar FliJ protein E3U39_00660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3U39_00660 PF02874 ATP synthase alpha/beta family, beta-barrel domain E3U39_00660 PF18269 T3SS EscN ATPase C-terminal domain E3U39_00665 PF02108 Flagellar assembly protein FliH E3U39_00670 PF01706 FliG C-terminal domain E3U39_00670 PF14841 FliG middle domain E3U39_00670 PF14842 FliG N-terminal domain E3U39_00675 PF01514 Secretory protein of YscJ/FliF family E3U39_00675 PF08345 Flagellar M-ring protein C-terminal E3U39_00680 PF02049 Flagellar hook-basal body complex protein FliE E3U39_00685 PF00460 Flagella basal body rod protein E3U39_00685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E3U39_00690 PF00460 Flagella basal body rod protein E3U39_00695 PF06018 CodY GAF-like domain E3U39_00695 PF08222 CodY helix-turn-helix domain E3U39_00700 PF00004 ATPase family associated with various cellular activities (AAA) E3U39_00700 PF10431 C-terminal, D2-small domain, of ClpB protein E3U39_00700 PF07724 AAA domain (Cdc48 subfamily) E3U39_00705 PF00227 Proteasome subunit E3U39_00710 PF02899 Phage integrase, N-terminal SAM-like domain E3U39_00710 PF00589 Phage integrase family E3U39_00715 PF01134 Glucose inhibited division protein A E3U39_00720 PF01396 Topoisomerase DNA binding C4 zinc finger E3U39_00720 PF01751 Toprim domain E3U39_00720 PF01131 DNA topoisomerase E3U39_00725 PF02481 DNA recombination-mediator protein A E3U39_00730 PF00549 CoA-ligase E3U39_00730 PF02629 CoA binding domain E3U39_00735 PF00549 CoA-ligase E3U39_00735 PF08442 ATP-grasp domain E3U39_00740 PF01312 FlhB HrpN YscU SpaS Family E3U39_00750 PF01351 Ribonuclease HII E3U39_00755 PF01926 50S ribosome-binding GTPase E3U39_00760 PF01245 Ribosomal protein L19 E3U39_00765 PF01746 tRNA (Guanine-1)-methyltransferase E3U39_00770 PF05239 PRC-barrel domain E3U39_00770 PF01782 RimM N-terminal domain E3U39_00775 PF11068 YlqD protein E3U39_00785 PF00886 Ribosomal protein S16 E3U39_00790 PF02978 Signal peptide binding domain E3U39_00790 PF02881 SRP54-type protein, helical bundle domain E3U39_00790 PF00448 SRP54-type protein, GTPase domain E3U39_00795 PF04297 Putative helix-turn-helix protein, YlxM / p13 like E3U39_00805 PF02881 SRP54-type protein, helical bundle domain E3U39_00805 PF00448 SRP54-type protein, GTPase domain E3U39_00810 PF06470 SMC proteins Flexible Hinge Domain E3U39_00810 PF02463 RecF/RecN/SMC N terminal domain E3U39_00815 PF00035 Double-stranded RNA binding motif E3U39_00815 PF14622 Ribonuclease-III-like E3U39_00820 PF00550 Phosphopantetheine attachment site E3U39_00830 PF00698 Acyl transferase domain E3U39_00835 PF02504 Fatty acid synthesis protein E3U39_00840 PF03061 Thioesterase superfamily E3U39_00845 PF00270 DEAD/DEAH box helicase E3U39_00845 PF00271 Helicase conserved C-terminal domain E3U39_00845 PF17191 RecG wedge domain E3U39_00850 PF03313 Serine dehydratase alpha chain E3U39_00855 PF01842 ACT domain E3U39_00855 PF03315 Serine dehydratase beta chain E3U39_00860 PF13684 Dihydroxyacetone kinase family E3U39_00860 PF02734 DAK2 domain E3U39_00865 PF03780 Asp23 family, cell envelope-related function E3U39_00870 PF00830 Ribosomal L28 family E3U39_00875 PF08183 Stage V sporulation protein family E3U39_00880 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain E3U39_00880 PF04263 Thiamin pyrophosphokinase, catalytic domain E3U39_00885 PF00834 Ribulose-phosphate 3 epimerase family E3U39_00890 PF03193 RsgA GTPase E3U39_00890 PF16745 RsgA N-terminal domain E3U39_00895 PF00069 Protein kinase domain E3U39_00895 PF03793 PASTA domain E3U39_00905 PF04055 Radical SAM superfamily E3U39_00910 PF01189 16S rRNA methyltransferase RsmB/F E3U39_00910 PF01029 NusB family E3U39_00915 PF02911 Formyl transferase, C-terminal domain E3U39_00915 PF00551 Formyl transferase E3U39_00920 PF01327 Polypeptide deformylase E3U39_00925 PF00271 Helicase conserved C-terminal domain E3U39_00925 PF17764 3′ DNA-binding domain (3′BD) E3U39_00925 PF18074 Primosomal protein N C-terminal domain E3U39_00925 PF04851 Type III restriction enzyme, res subunit E3U39_00925 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E3U39_00930 PF04127 DNA / pantothenate metabolism flavoprotein E3U39_00930 PF02441 Flavoprotein E3U39_00935 PF01192 RNA polymerase Rpb6 E3U39_00940 PF00625 Guanylate kinase E3U39_00945 PF04025 Domain of unknown function (DUF370) E3U39_00950 PF08340 Domain of unknown function (DUF1732) E3U39_00950 PF03755 YicC-like family, N-terminal region E3U39_00955 PF00690 Cation transporter/ATPase, N-terminus E3U39_00955 PF00689 Cation transporting ATPase, C-terminus E3U39_00975 PF01903 CbiX E3U39_00980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E3U39_00990 PF01747 ATP-sulfurylase E3U39_00990 PF14306 PUA-like domain E3U39_00995 PF01384 Phosphate transporter family E3U39_01000 PF01507 Phosphoadenosine phosphosulfate reductase family E3U39_01005 PF00156 Phosphoribosyl transferase domain E3U39_01010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E3U39_01015 PF01180 Dihydroorotate dehydrogenase E3U39_01020 PF00175 Oxidoreductase NAD-binding domain E3U39_01020 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B E3U39_01025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E3U39_01025 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain E3U39_01025 PF02142 MGS-like domain E3U39_01030 PF00117 Glutamine amidotransferase class-I E3U39_01030 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain E3U39_01035 PF01979 Amidohydrolase family E3U39_01040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E3U39_01040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E3U39_01045 PF00860 Permease family E3U39_01050 PF00156 Phosphoribosyl transferase domain E3U39_01055 PF00849 RNA pseudouridylate synthase E3U39_01055 PF01479 S4 domain E3U39_01060 PF01252 Signal peptidase (SPase) II E3U39_01065 PF01258 Prokaryotic dksA/traR C4-type zinc finger E3U39_01070 PF08264 Anticodon-binding domain of tRNA E3U39_01070 PF00133 tRNA synthetases class I (I, L, M and V) E3U39_01080 PF05103 DivIVA protein E3U39_01085 PF17774 Putative RNA-binding domain in YlmH E3U39_01085 PF01479 S4 domain E3U39_01090 PF02325 YGGT family E3U39_01095 PF04472 Cell division protein SepF E3U39_01100 PF01168 Alanine racemase, N-terminal domain E3U39_01110 PF05239 PRC-barrel domain E3U39_01120 PF00005 ABC transporter E3U39_01125 PF04542 Sigma-70 region 2 E3U39_01125 PF04545 Sigma-70, region 4 E3U39_01125 PF04539 Sigma-70 region 3 E3U39_01130 PF04542 Sigma-70 region 2 E3U39_01130 PF04545 Sigma-70, region 4 E3U39_01135 PF03419 Sporulation factor SpoIIGA E3U39_01140 PF05922 Peptidase inhibitor I9 E3U39_01140 PF00082 Subtilase family E3U39_01145 PF12327 FtsZ family, C-terminal domain E3U39_01145 PF00091 Tubulin/FtsZ family, GTPase domain E3U39_01150 PF02491 SHS2 domain inserted in FTSA E3U39_01155 PF08478 POTRA domain, FtsQ-type E3U39_01160 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E3U39_01160 PF01565 FAD binding domain E3U39_01165 PF03033 Glycosyltransferase family 28 N-terminal domain E3U39_01165 PF04101 Glycosyltransferase family 28 C-terminal domain E3U39_01170 PF01098 Cell cycle protein E3U39_01175 PF02875 Mur ligase family, glutamate ligase domain E3U39_01175 PF08245 Mur ligase middle domain E3U39_01180 PF00953 Glycosyl transferase family 4 E3U39_01180 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 E3U39_01185 PF01225 Mur ligase family, catalytic domain E3U39_01185 PF08245 Mur ligase middle domain E3U39_01185 PF02875 Mur ligase family, glutamate ligase domain E3U39_01190 PF00905 Penicillin binding protein transpeptidase domain E3U39_01190 PF03717 Penicillin-binding Protein dimerisation domain E3U39_01190 PF03793 PASTA domain E3U39_01205 PF01795 MraW methylase family E3U39_01210 PF02381 MraZ protein, putative antitoxin-like E3U39_01215 PF10079 Bacillithiol biosynthesis BshC E3U39_01220 PF08546 Ketopantoate reductase PanE/ApbA C terminal E3U39_01220 PF02558 Ketopantoate reductase PanE/ApbA E3U39_01225 PF00583 Acetyltransferase (GNAT) family E3U39_01235 PF01783 Ribosomal L32p protein family E3U39_01240 PF02620 Large ribosomal RNA subunit accumulation protein YceD E3U39_01245 PF05636 HIGH Nucleotidyl Transferase E3U39_01250 PF13180 PDZ domain E3U39_01250 PF05362 Lon protease (S16) C-terminal proteolytic domain E3U39_01255 PF01734 Patatin-like phospholipase E3U39_01260 PF07670 Nucleoside recognition E3U39_01265 PF01467 Cytidylyltransferase-like E3U39_01280 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) E3U39_01285 PF06133 Control of competence regulator ComK, YlbF/YmcA E3U39_01290 PF14003 YlbE-like protein E3U39_01295 PF14071 Putative coat protein E3U39_01300 PF14504 CAP-associated N-terminal E3U39_01300 PF00188 Cysteine-rich secretory protein family E3U39_01305 PF00571 CBS domain E3U39_01310 PF08868 YugN-like family E3U39_01315 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) E3U39_01320 PF03626 Prokaryotic Cytochrome C oxidase subunit IV E3U39_01325 PF00510 Cytochrome c oxidase subunit III E3U39_01330 PF00115 Cytochrome C and Quinol oxidase polypeptide I E3U39_01335 PF02790 Cytochrome C oxidase subunit II, transmembrane domain E3U39_01335 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E3U39_01335 PF00034 Cytochrome c E3U39_01340 PF01040 UbiA prenyltransferase family E3U39_01345 PF02628 Cytochrome oxidase assembly protein E3U39_01350 PF02785 Biotin carboxylase C-terminal domain E3U39_01350 PF00682 HMGL-like E3U39_01350 PF02436 Conserved carboxylase domain E3U39_01350 PF00289 Biotin carboxylase, N-terminal domain E3U39_01350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E3U39_01350 PF00364 Biotin-requiring enzyme E3U39_01355 PF01098 Cell cycle protein E3U39_01360 PF07408 Protein of unknown function (DUF1507) E3U39_01365 PF04960 Glutaminase E3U39_01375 PF13638 PIN domain E3U39_01375 PF02562 PhoH-like protein E3U39_01380 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) E3U39_01385 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) E3U39_01390 PF14036 YlaH-like protein E3U39_01400 PF17259 Family of unknown function (DUF5325) E3U39_01410 PF13490 Putative zinc-finger E3U39_01415 PF04542 Sigma-70 region 2 E3U39_01415 PF08281 Sigma-70, region 4 E3U39_01420 PF01447 Thermolysin metallopeptidase, catalytic domain E3U39_01420 PF03413 Peptidase propeptide and YPEB domain E3U39_01420 PF07504 Fungalysin/Thermolysin Propeptide Motif E3U39_01420 PF02868 Thermolysin metallopeptidase, alpha-helical domain E3U39_01425 PF00583 Acetyltransferase (GNAT) family E3U39_01430 PF00459 Inositol monophosphatase family E3U39_01445 PF06335 Protein of unknown function (DUF1054) E3U39_01450 PF05256 Uncharacterised protein family (UPF0223) E3U39_01455 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E3U39_01455 PF01276 Orn/Lys/Arg decarboxylase, major domain E3U39_01460 PF13790 SR1 protein E3U39_01475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E3U39_01475 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3U39_01480 PF00364 Biotin-requiring enzyme E3U39_01480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E3U39_01480 PF02817 e3 binding domain E3U39_01485 PF02780 Transketolase, C-terminal domain E3U39_01485 PF02779 Transketolase, pyrimidine binding domain E3U39_01490 PF00676 Dehydrogenase E1 component E3U39_01495 PF00144 Beta-lactamase E3U39_01495 PF11954 Domain of unknown function (DUF3471) E3U39_01500 PF00501 AMP-binding enzyme E3U39_01500 PF13193 AMP-binding enzyme C-terminal domain E3U39_01500 PF08659 KR domain E3U39_01500 PF00550 Phosphopantetheine attachment site E3U39_01500 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_01500 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_01500 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_01500 PF14765 Polyketide synthase dehydratase E3U39_01500 PF00668 Condensation domain E3U39_01505 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_01505 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_01505 PF00550 Phosphopantetheine attachment site E3U39_01505 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_01505 PF08659 KR domain E3U39_01505 PF14765 Polyketide synthase dehydratase E3U39_01510 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_01510 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_01510 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_01510 PF14765 Polyketide synthase dehydratase E3U39_01510 PF00550 Phosphopantetheine attachment site E3U39_01510 PF08659 KR domain E3U39_01515 PF14765 Polyketide synthase dehydratase E3U39_01515 PF00550 Phosphopantetheine attachment site E3U39_01515 PF08659 KR domain E3U39_01515 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_01515 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_01515 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_01520 PF00668 Condensation domain E3U39_01520 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_01520 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_01520 PF08659 KR domain E3U39_01520 PF00550 Phosphopantetheine attachment site E3U39_01520 PF13193 AMP-binding enzyme C-terminal domain E3U39_01520 PF14765 Polyketide synthase dehydratase E3U39_01520 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_01520 PF00501 AMP-binding enzyme E3U39_01525 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_01525 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_01525 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_01525 PF08659 KR domain E3U39_01525 PF00550 Phosphopantetheine attachment site E3U39_01525 PF14765 Polyketide synthase dehydratase E3U39_01530 PF14765 Polyketide synthase dehydratase E3U39_01530 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_01530 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_01530 PF08659 KR domain E3U39_01530 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_01530 PF00550 Phosphopantetheine attachment site E3U39_01530 PF00668 Condensation domain E3U39_01530 PF00501 AMP-binding enzyme E3U39_01530 PF13193 AMP-binding enzyme C-terminal domain E3U39_01535 PF00698 Acyl transferase domain E3U39_01545 PF10368 Putative cell-wall binding lipoprotein E3U39_01555 PF01327 Polypeptide deformylase E3U39_01570 PF17770 Ribonuclease J C-terminal domain E3U39_01570 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain E3U39_01570 PF00753 Metallo-beta-lactamase superfamily E3U39_01575 PF01979 Amidohydrolase family E3U39_01575 PF13382 Adenine deaminase C-terminal domain E3U39_01580 PF02254 TrkA-N domain E3U39_01580 PF02080 TrkA-C domain E3U39_01585 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like E3U39_01590 PF00989 PAS fold E3U39_01590 PF00512 His Kinase A (phospho-acceptor) domain E3U39_01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_01595 PF18277 AbrB C-terminal domain E3U39_01595 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin E3U39_01610 PF17447 Uncharacterized YkpC-like E3U39_01615 PF02073 Thermophilic metalloprotease (M29) E3U39_01620 PF08546 Ketopantoate reductase PanE/ApbA C terminal E3U39_01620 PF02558 Ketopantoate reductase PanE/ApbA E3U39_01625 PF00005 ABC transporter E3U39_01625 PF12848 ABC transporter E3U39_01635 PF10502 Signal peptidase, peptidase S26 E3U39_01640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3U39_01640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3U39_01645 PF00294 pfkB family carbohydrate kinase E3U39_01650 PF00455 DeoR C terminal sensor domain E3U39_01650 PF08220 DeoR-like helix-turn-helix domain E3U39_01655 PF02687 FtsX-like permease family E3U39_01655 PF12704 MacB-like periplasmic core domain E3U39_01660 PF00005 ABC transporter E3U39_01665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E3U39_01670 PF04893 Yip1 domain E3U39_01675 PF02597 ThiS family E3U39_01680 PF02391 MoaE protein E3U39_01685 PF03205 Molybdopterin guanine dinucleotide synthesis protein B E3U39_01690 PF03453 MoeA N-terminal region (domain I and II) E3U39_01690 PF03454 MoeA C-terminal region (domain IV) E3U39_01690 PF00994 Probable molybdopterin binding domain E3U39_01695 PF00899 ThiF family E3U39_01700 PF12804 MobA-like NTP transferase domain E3U39_01715 PF00578 AhpC/TSA family E3U39_01720 PF00924 Mechanosensitive ion channel E3U39_01725 PF03698 Uncharacterised protein family (UPF0180) E3U39_01730 PF01546 Peptidase family M20/M25/M40 E3U39_01730 PF07687 Peptidase dimerisation domain E3U39_01735 PF14602 Hexapeptide repeat of succinyl-transferase E3U39_01735 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal E3U39_01735 PF00132 Bacterial transferase hexapeptide (six repeats) E3U39_01740 PF00258 Flavodoxin E3U39_01750 PF00258 Flavodoxin E3U39_01755 PF03466 LysR substrate binding domain E3U39_01755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3U39_01765 PF14156 Antirepressor AbbA E3U39_01770 PF04308 Ribonuclease H-like E3U39_01775 PF08796 Protein of unknown function (DUF1797) E3U39_01780 PF00563 EAL domain E3U39_01780 PF10388 EAL-domain associated signalling protein domain E3U39_01795 PF00149 Calcineurin-like phosphoesterase E3U39_01795 PF10518 TAT (twin-arginine translocation) pathway signal sequence E3U39_01800 PF01476 LysM domain E3U39_01800 PF03734 L,D-transpeptidase catalytic domain E3U39_01805 PF07690 Major Facilitator Superfamily E3U39_01810 PF14177 YkyB-like protein E3U39_01815 PF01584 CheW-like domain E3U39_01815 PF00072 Response regulator receiver domain E3U39_01825 PF00155 Aminotransferase class I and II E3U39_01830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_01830 PF00512 His Kinase A (phospho-acceptor) domain E3U39_01830 PF00989 PAS fold E3U39_01830 PF08447 PAS fold E3U39_01835 PF00905 Penicillin binding protein transpeptidase domain E3U39_01835 PF03717 Penicillin-binding Protein dimerisation domain E3U39_01840 PF00188 Cysteine-rich secretory protein family E3U39_01845 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E3U39_01845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E3U39_01850 PF02743 Cache domain E3U39_01850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3U39_01850 PF00672 HAMP domain E3U39_01860 PF11132 Transcriptional regulator protein (SplA) E3U39_01865 PF00391 PEP-utilising enzyme, mobile domain E3U39_01865 PF05524 PEP-utilising enzyme, N-terminal E3U39_01865 PF02896 PEP-utilising enzyme, TIM barrel domain E3U39_01870 PF00381 PTS HPr component phosphorylation site E3U39_01875 PF02378 Phosphotransferase system, EIIC E3U39_01875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E3U39_01875 PF00367 phosphotransferase system, EIIB E3U39_01880 PF03123 CAT RNA binding domain E3U39_01880 PF00874 PRD domain E3U39_01885 PF00356 Bacterial regulatory proteins, lacI family E3U39_01885 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E3U39_01890 PF01321 Creatinase/Prolidase N-terminal domain E3U39_01890 PF00557 Metallopeptidase family M24 E3U39_01900 PF00578 AhpC/TSA family E3U39_01905 PF01943 Polysaccharide biosynthesis protein E3U39_01910 PF07486 Cell Wall Hydrolase E3U39_01920 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) E3U39_01925 PF11514 Protein of unknown function (DUF3219) E3U39_01935 PF00704 Glycosyl hydrolases family 18 E3U39_01940 PF01476 LysM domain E3U39_01945 PF01476 LysM domain E3U39_01960 PF01638 HxlR-like helix-turn-helix E3U39_01965 PF14489 QueF-like protein E3U39_01970 PF04055 Radical SAM superfamily E3U39_01975 PF01242 6-pyruvoyl tetrahydropterin synthase E3U39_01980 PF06508 Queuosine biosynthesis protein QueC E3U39_02000 PF10431 C-terminal, D2-small domain, of ClpB protein E3U39_02000 PF17871 AAA lid domain E3U39_02000 PF07724 AAA domain (Cdc48 subfamily) E3U39_02000 PF00004 ATPase family associated with various cellular activities (AAA) E3U39_02005 PF01618 MotA/TolQ/ExbB proton channel family E3U39_02010 PF13677 Membrane MotB of proton-channel complex MotA/MotB E3U39_02010 PF00691 OmpA family E3U39_02015 PF01047 MarR family E3U39_02020 PF00512 His Kinase A (phospho-acceptor) domain E3U39_02020 PF02743 Cache domain E3U39_02020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_02025 PF09388 Spo0E like sporulation regulatory protein E3U39_02030 PF03079 ARD/ARD' family E3U39_02035 PF00596 Class II Aldolase and Adducin N-terminal domain E3U39_02045 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain E3U39_02045 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain E3U39_02050 PF00155 Aminotransferase class I and II E3U39_02055 PF00795 Carbon-nitrogen hydrolase E3U39_02060 PF01636 Phosphotransferase enzyme family E3U39_02065 PF01008 Initiation factor 2 subunit family E3U39_02070 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E3U39_02070 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E3U39_02075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_02075 PF00512 His Kinase A (phospho-acceptor) domain E3U39_02075 PF00989 PAS fold E3U39_02075 PF13188 PAS domain E3U39_02075 PF13426 PAS domain E3U39_02080 PF01757 Acyltransferase family E3U39_02090 PF04239 Protein of unknown function (DUF421) E3U39_02095 PF02386 Cation transport protein E3U39_02100 PF01435 Peptidase family M48 E3U39_02105 PF08876 Domain of unknown function (DUF1836) E3U39_02110 PF00269 Small, acid-soluble spore proteins, alpha/beta type E3U39_02115 PF12791 Anti-sigma factor N-terminus E3U39_02120 PF04542 Sigma-70 region 2 E3U39_02125 PF03741 Integral membrane protein TerC family E3U39_02130 PF09335 SNARE associated Golgi protein E3U39_02135 PF02735 Ku70/Ku80 beta-barrel domain E3U39_02140 PF01068 ATP dependent DNA ligase domain E3U39_02150 PF01047 MarR family E3U39_02165 PF13411 MerR HTH family regulatory protein E3U39_02170 PF03448 MgtE intracellular N domain E3U39_02170 PF01769 Divalent cation transporter E3U39_02170 PF00571 CBS domain E3U39_02185 PF11132 Transcriptional regulator protein (SplA) E3U39_02190 PF00704 Glycosyl hydrolases family 18 E3U39_02190 PF01476 LysM domain E3U39_02195 PF09819 ABC-type cobalt transport system, permease component E3U39_02200 PF00005 ABC transporter E3U39_02205 PF02361 Cobalt transport protein E3U39_02210 PF01740 STAS domain E3U39_02215 PF00082 Subtilase family E3U39_02220 PF08267 Cobalamin-independent synthase, N-terminal domain E3U39_02220 PF01717 Cobalamin-independent synthase, Catalytic domain E3U39_02230 PF12832 MFS_1 like family E3U39_02240 PF00535 Glycosyl transferase family 2 E3U39_02240 PF13181 Tetratricopeptide repeat E3U39_02255 PF02566 OsmC-like protein E3U39_02260 PF01047 MarR family E3U39_02265 PF02566 OsmC-like protein E3U39_02270 PF00171 Aldehyde dehydrogenase family E3U39_02275 PF01472 PUA domain E3U39_02275 PF00696 Amino acid kinase family E3U39_02280 PF01842 ACT domain E3U39_02280 PF00551 Formyl transferase E3U39_02285 PF00893 Small Multidrug Resistance protein E3U39_02290 PF00893 Small Multidrug Resistance protein E3U39_02295 PF13302 Acetyltransferase (GNAT) domain E3U39_02300 PF03061 Thioesterase superfamily E3U39_02310 PF10282 Lactonase, 7-bladed beta-propeller E3U39_02315 PF00005 ABC transporter E3U39_02315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3U39_02320 PF00877 NlpC/P60 family E3U39_02325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E3U39_02325 PF13378 Enolase C-terminal domain-like E3U39_02330 PF17676 LD-carboxypeptidase C-terminal domain E3U39_02330 PF02016 LD-carboxypeptidase N-terminal domain E3U39_02335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3U39_02340 PF00005 ABC transporter E3U39_02340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3U39_02345 PF12911 N-terminal TM domain of oligopeptide transport permease C E3U39_02345 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_02350 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_02355 PF04951 D-aminopeptidase E3U39_02360 PF07690 Major Facilitator Superfamily E3U39_02365 PF13180 PDZ domain E3U39_02370 PF00535 Glycosyl transferase family 2 E3U39_02375 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase E3U39_02380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E3U39_02385 PF13520 Amino acid permease E3U39_02390 PF01865 Protein of unknown function DUF47 E3U39_02395 PF01384 Phosphate transporter family E3U39_02400 PF14171 Toxin SpoIISA, type II toxin-antitoxin system E3U39_02405 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system E3U39_02410 PF01471 Putative peptidoglycan binding domain E3U39_02410 PF01476 LysM domain E3U39_02410 PF01510 N-acetylmuramoyl-L-alanine amidase E3U39_02415 PF04688 SPP1 phage holin E3U39_02420 PF10779 Haemolysin XhlA E3U39_02430 PF09693 Phage uncharacterised protein (Phage_XkdX) E3U39_02450 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) E3U39_02455 PF04865 Baseplate J-like protein E3U39_02460 PF10934 Protein of unknown function (DUF2634) E3U39_02465 PF10844 Protein of unknown function (DUF2577) E3U39_02475 PF01476 LysM domain E3U39_02480 PF01464 Transglycosylase SLT domain E3U39_02480 PF01464 Transglycosylase SLT domain E3U39_02480 PF01464 Transglycosylase SLT domain E3U39_02490 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC E3U39_02495 PF09393 Phage tail tube protein E3U39_02500 PF17481 Phage tail sheath protein beta-sandwich domain E3U39_02500 PF04984 Phage tail sheath protein subtilisin-like domain E3U39_02500 PF17482 Phage tail sheath C-terminal domain E3U39_02515 PF04883 Bacteriophage HK97-gp10, putative tail-component E3U39_02520 PF12206 Domain of unknown function (DUF3599) E3U39_02525 PF11436 Protein of unknown function (DUF3199) E3U39_02530 PF05065 Phage capsid family E3U39_02535 PF14550 Putative phage serine protease XkdF E3U39_02540 PF04860 Phage portal protein E3U39_02545 PF04466 Phage terminase large subunit E3U39_02545 PF17288 Terminase RNAseH like domain E3U39_02550 PF03592 Terminase small subunit E3U39_02550 PF10668 Phage terminase small subunit E3U39_02555 PF08281 Sigma-70, region 4 E3U39_02560 PF17356 Phage-like element PBSX protein XtrA E3U39_02570 PF01695 IstB-like ATP binding protein E3U39_02585 PF01381 Helix-turn-helix E3U39_02595 PF06114 IrrE N-terminal-like domain E3U39_02600 PF05067 Manganese containing catalase E3U39_02605 PF05908 Poly-gamma-glutamate hydrolase E3U39_02610 PF08000 Bacterial PH domain E3U39_02615 PF01471 Putative peptidoglycan binding domain E3U39_02615 PF01476 LysM domain E3U39_02615 PF01510 N-acetylmuramoyl-L-alanine amidase E3U39_02625 PF18801 response regulator aspartate phosphatase H, N terminal E3U39_02630 PF05163 DinB family E3U39_02635 PF01925 Sulfite exporter TauE/SafE E3U39_02640 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus E3U39_02640 PF08666 SAF domain E3U39_02645 PF08125 Mannitol dehydrogenase C-terminal domain E3U39_02645 PF01232 Mannitol dehydrogenase Rossmann domain E3U39_02650 PF00356 Bacterial regulatory proteins, lacI family E3U39_02660 PF02614 Glucuronate isomerase E3U39_02665 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3U39_02670 PF07849 Protein of unknown function (DUF1641) E3U39_02680 PF13536 Putative multidrug resistance efflux transporter E3U39_02685 PF00005 ABC transporter E3U39_02690 PF03649 Uncharacterised protein family (UPF0014) E3U39_02695 PF02602 Uroporphyrinogen-III synthase HemD E3U39_02705 PF04101 Glycosyltransferase family 28 C-terminal domain E3U39_02710 PF00067 Cytochrome P450 E3U39_02715 PF07849 Protein of unknown function (DUF1641) E3U39_02720 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E3U39_02720 PF00384 Molybdopterin oxidoreductase E3U39_02720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3U39_02720 PF12838 4Fe-4S dicluster domain E3U39_02720 PF01568 Molydopterin dinucleotide binding domain E3U39_02725 PF14172 Domain of unknown function (DUF4309) E3U39_02730 PF10990 Protein of unknown function (DUF2809) E3U39_02735 PF14070 Putative motility protein E3U39_02745 PF02308 MgtC family E3U39_02765 PF08220 DeoR-like helix-turn-helix domain E3U39_02765 PF00455 DeoR C terminal sensor domain E3U39_02770 PF00232 Glycosyl hydrolase family 1 E3U39_02775 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit E3U39_02780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3U39_02780 PF02378 Phosphotransferase system, EIIC E3U39_02785 PF10509 Galactokinase galactose-binding signature E3U39_02785 PF08544 GHMP kinases C terminal E3U39_02785 PF00288 GHMP kinases N terminal domain E3U39_02790 PF16363 GDP-mannose 4,6 dehydratase E3U39_02795 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain E3U39_02795 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain E3U39_02800 PF07745 Glycosyl hydrolase family 53 E3U39_02805 PF01047 MarR family E3U39_02810 PF07690 Major Facilitator Superfamily E3U39_02815 PF03992 Antibiotic biosynthesis monooxygenase E3U39_02845 PF17094 Uncharacterised protein family (UPF0715) E3U39_02865 PF18593 CdiI immunity protein E3U39_02900 PF01053 Cys/Met metabolism PLP-dependent enzyme E3U39_02905 PF01053 Cys/Met metabolism PLP-dependent enzyme E3U39_02910 PF00756 Putative esterase E3U39_02920 PF13673 Acetyltransferase (GNAT) domain E3U39_02930 PF00005 ABC transporter E3U39_02940 PF00753 Metallo-beta-lactamase superfamily E3U39_02950 PF00580 UvrD/REP helicase N-terminal domain E3U39_02950 PF13361 UvrD-like helicase C-terminal domain E3U39_02955 PF14069 Stage VI sporulation protein F E3U39_02970 PF07098 Protein of unknown function (DUF1360) E3U39_02975 PF07552 Spore Coat Protein X and V domain E3U39_02985 PF07552 Spore Coat Protein X and V domain E3U39_02990 PF10612 Spore coat protein Z E3U39_02995 PF10612 Spore coat protein Z E3U39_03000 PF14153 Spore coat protein CotO E3U39_03010 PF08543 Phosphomethylpyrimidine kinase E3U39_03015 PF00899 ThiF family E3U39_03020 PF05690 Thiazole biosynthesis protein ThiG E3U39_03025 PF02597 ThiS family E3U39_03030 PF01266 FAD dependent oxidoreductase E3U39_03035 PF02581 Thiamine monophosphate synthase E3U39_03040 PF03070 TENA/THI-4/PQQC family E3U39_03045 PF02080 TrkA-C domain E3U39_03045 PF02254 TrkA-N domain E3U39_03045 PF00999 Sodium/hydrogen exchanger family E3U39_03055 PF00149 Calcineurin-like phosphoesterase E3U39_03060 PF00849 RNA pseudouridylate synthase E3U39_03065 PF01513 ATP-NAD kinase E3U39_03070 PF04607 Region found in RelA / SpoT proteins E3U39_03080 PF01928 CYTH domain E3U39_03085 PF01464 Transglycosylase SLT domain E3U39_03090 PF01152 Bacterial-like globin E3U39_03100 PF08439 Oligopeptidase F E3U39_03100 PF01432 Peptidase family M3 E3U39_03105 PF06054 Competence protein CoiA-like family E3U39_03110 PF05389 Negative regulator of genetic competence (MecA) E3U39_03115 PF03741 Integral membrane protein TerC family E3U39_03120 PF03960 ArsC family E3U39_03125 PF13508 Acetyltransferase (GNAT) domain E3U39_03135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3U39_03135 PF00005 ABC transporter E3U39_03140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3U39_03140 PF00005 ABC transporter E3U39_03145 PF12911 N-terminal TM domain of oligopeptide transport permease C E3U39_03145 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_03150 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_03155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3U39_03160 PF00579 tRNA synthetases class I (W and Y) E3U39_03165 PF12227 Protein of unknown function (DUF3603) E3U39_03170 PF12911 N-terminal TM domain of oligopeptide transport permease C E3U39_03170 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_03175 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_03180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3U39_03185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3U39_03185 PF00005 ABC transporter E3U39_03190 PF00005 ABC transporter E3U39_03190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3U39_03195 PF10026 Predicted Zn-dependent protease (DUF2268) E3U39_03200 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_03200 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_03205 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E3U39_03205 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E3U39_03215 PF10815 ComZ E3U39_03220 PF02608 ABC transporter substrate-binding protein PnrA-like E3U39_03240 PF11151 Protein of unknown function (DUF2929) E3U39_03245 PF14168 YjzC-like protein E3U39_03250 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E3U39_03250 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E3U39_03255 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain E3U39_03255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E3U39_03260 PF00117 Glutamine amidotransferase class-I E3U39_03260 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain E3U39_03265 PF00202 Aminotransferase class-III E3U39_03270 PF00696 Amino acid kinase family E3U39_03275 PF01960 ArgJ family E3U39_03280 PF01118 Semialdehyde dehydrogenase, NAD binding domain E3U39_03280 PF02774 Semialdehyde dehydrogenase, dimerisation domain E3U39_03285 PF07690 Major Facilitator Superfamily E3U39_03290 PF01565 FAD binding domain E3U39_03295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E3U39_03300 PF01883 Iron-sulfur cluster assembly protein E3U39_03305 PF00326 Prolyl oligopeptidase family E3U39_03315 PF12758 Protein of unknown function (DUF3813) E3U39_03320 PF12690 Intracellular proteinase inhibitor E3U39_03325 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E3U39_03325 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E3U39_03330 PF02645 Uncharacterised protein, DegV family COG1307 E3U39_03340 PF00067 Cytochrome P450 E3U39_03345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3U39_03345 PF12729 Four helix bundle sensory module for signal transduction E3U39_03345 PF00672 HAMP domain E3U39_03355 PF13509 S1 domain E3U39_03355 PF17783 CvfB-like winged helix domain E3U39_03360 PF04461 Protein of unknown function (DUF520) E3U39_03365 PF02574 Homocysteine S-methyltransferase E3U39_03365 PF02219 Methylenetetrahydrofolate reductase E3U39_03370 PF13673 Acetyltransferase (GNAT) domain E3U39_03375 PF13599 Pentapeptide repeats (9 copies) E3U39_03380 PF00392 Bacterial regulatory proteins, gntR family E3U39_03380 PF00155 Aminotransferase class I and II E3U39_03385 PF01810 LysE type translocator E3U39_03390 PF05163 DinB family E3U39_03395 PF12833 Helix-turn-helix domain E3U39_03395 PF02311 AraC-like ligand binding domain E3U39_03400 PF01554 MatE E3U39_03410 PF00733 Asparagine synthase E3U39_03410 PF13537 Glutamine amidotransferase domain E3U39_03415 PF10949 Protein of unknown function (DUF2777) E3U39_03420 PF07457 Protein of unknown function (DUF1516) E3U39_03425 PF01557 Fumarylacetoacetate (FAA) hydrolase family E3U39_03430 PF09388 Spo0E like sporulation regulatory protein E3U39_03435 PF10676 Spore germination protein gerPA/gerPF E3U39_03440 PF10803 Spore germination GerPB E3U39_03445 PF10737 Spore germination protein GerPC E3U39_03455 PF10970 Spore germination protein GerPE E3U39_03460 PF10676 Spore germination protein gerPA/gerPF E3U39_03470 PF13476 AAA domain E3U39_03475 PF12320 Type 5 capsule protein repressor C-terminal domain E3U39_03475 PF00149 Calcineurin-like phosphoesterase E3U39_03480 PF12705 PD-(D/E)XK nuclease superfamily E3U39_03480 PF00580 UvrD/REP helicase N-terminal domain E3U39_03480 PF13361 UvrD-like helicase C-terminal domain E3U39_03485 PF13361 UvrD-like helicase C-terminal domain E3U39_03485 PF12705 PD-(D/E)XK nuclease superfamily E3U39_03495 PF02915 Rubrerythrin E3U39_03500 PF08361 MAATS-type transcriptional repressor, C-terminal region E3U39_03500 PF00440 Bacterial regulatory proteins, tetR family E3U39_03505 PF07690 Major Facilitator Superfamily E3U39_03510 PF05145 Transition state regulatory protein AbrB E3U39_03515 PF01047 MarR family E3U39_03520 PF01494 FAD binding domain E3U39_03525 PF10502 Signal peptidase, peptidase S26 E3U39_03530 PF09335 SNARE associated Golgi protein E3U39_03540 PF11755 Protein of unknown function (DUF3311) E3U39_03545 PF00474 Sodium:solute symporter family E3U39_03550 PF01906 Putative heavy-metal-binding E3U39_03555 PF05901 Excalibur calcium-binding domain E3U39_03560 PF15493 Domain of unknown function, YrpD E3U39_03570 PF08818 Domain of unknown function (DU1801) E3U39_03580 PF06338 ComK protein E3U39_03585 PF08858 IDEAL domain E3U39_03595 PF01266 FAD dependent oxidoreductase E3U39_03595 PF00355 Rieske [2Fe-2S] domain E3U39_03600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3U39_03605 PF02632 BioY family E3U39_03610 PF00501 AMP-binding enzyme E3U39_03610 PF13193 AMP-binding enzyme C-terminal domain E3U39_03615 PF02803 Thiolase, C-terminal domain E3U39_03615 PF00108 Thiolase, N-terminal domain E3U39_03620 PF00300 Histidine phosphatase superfamily (branch 1) E3U39_03625 PF01497 Periplasmic binding protein E3U39_03635 PF05922 Peptidase inhibitor I9 E3U39_03635 PF00082 Subtilase family E3U39_03640 PF01435 Peptidase family M48 E3U39_03640 PF16491 CAAX prenyl protease N-terminal, five membrane helices E3U39_03650 PF00501 AMP-binding enzyme E3U39_03650 PF13193 AMP-binding enzyme C-terminal domain E3U39_03655 PF13460 NAD(P)H-binding E3U39_03660 PF10437 Bacterial lipoate protein ligase C-terminus E3U39_03660 PF03099 Biotin/lipoate A/B protein ligase family E3U39_03665 PF12706 Beta-lactamase superfamily domain E3U39_03670 PF14149 YhfH-like protein E3U39_03675 PF00375 Sodium:dicarboxylate symporter family E3U39_03680 PF05343 M42 glutamyl aminopeptidase E3U39_03690 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E3U39_03690 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E3U39_03700 PF00440 Bacterial regulatory proteins, tetR family E3U39_03700 PF17932 Tetracyclin repressor-like, C-terminal domain E3U39_03715 PF01208 Uroporphyrinogen decarboxylase (URO-D) E3U39_03720 PF00912 Transglycosylase E3U39_03720 PF00905 Penicillin binding protein transpeptidase domain E3U39_03725 PF03992 Antibiotic biosynthesis monooxygenase E3U39_03735 PF01546 Peptidase family M20/M25/M40 E3U39_03735 PF07687 Peptidase dimerisation domain E3U39_03740 PF12787 EcsC protein family E3U39_03745 PF05975 Bacterial ABC transporter protein EcsB E3U39_03750 PF00005 ABC transporter E3U39_03755 PF01230 HIT domain E3U39_03760 PF00266 Aminotransferase class-V E3U39_03765 PF17099 Tryptophan transporter TrpP E3U39_03775 PF12732 YtxH-like protein E3U39_03780 PF01047 MarR family E3U39_03785 PF08963 Protein of unknown function (DUF1878) E3U39_03795 PF11667 Putative zincin peptidase E3U39_03805 PF09680 Family of unknown function E3U39_03810 PF09680 Family of unknown function E3U39_03820 PF14147 Sporulation protein YhaL E3U39_03825 PF01966 HD domain E3U39_03830 PF13514 AAA domain E3U39_03835 PF00149 Calcineurin-like phosphoesterase E3U39_03845 PF00005 ABC transporter E3U39_03845 PF13732 Domain of unknown function (DUF4162) E3U39_03850 PF14120 YhzD-like protein E3U39_03855 PF00378 Enoyl-CoA hydratase/isomerase E3U39_03865 PF02080 TrkA-C domain E3U39_03870 PF00999 Sodium/hydrogen exchanger family E3U39_03875 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) E3U39_03880 PF04055 Radical SAM superfamily E3U39_03890 PF08713 DNA alkylation repair enzyme E3U39_03895 PF06133 Control of competence regulator ComK, YlbF/YmcA E3U39_03900 PF04286 Protein of unknown function (DUF445) E3U39_03905 PF14398 YheC/D like ATP-grasp E3U39_03910 PF14398 YheC/D like ATP-grasp E3U39_03915 PF17277 Family of unknown function (DUF5342) E3U39_03925 PF00269 Small, acid-soluble spore proteins, alpha/beta type E3U39_03930 PF13460 NAD(P)H-binding E3U39_03935 PF00005 ABC transporter E3U39_03935 PF00664 ABC transporter transmembrane region E3U39_03940 PF00005 ABC transporter E3U39_03940 PF00664 ABC transporter transmembrane region E3U39_03945 PF00582 Universal stress protein family E3U39_03955 PF13977 BetI-type transcriptional repressor, C-terminal E3U39_03955 PF00440 Bacterial regulatory proteins, tetR family E3U39_03960 PF01063 Amino-transferase class IV E3U39_03965 PF01522 Polysaccharide deacetylase E3U39_03970 PF02146 Sir2 family E3U39_03975 PF00924 Mechanosensitive ion channel E3U39_03980 PF17444 Uncharacterized YhdX-like E3U39_03985 PF03009 Glycerophosphoryl diester phosphodiesterase family E3U39_03990 PF02537 CrcB-like protein, Camphor Resistance (CrcB) E3U39_03995 PF02537 CrcB-like protein, Camphor Resistance (CrcB) E3U39_04000 PF01595 Cyclin M transmembrane N-terminal domain E3U39_04000 PF03471 Transporter associated domain E3U39_04000 PF00571 CBS domain E3U39_04005 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_04005 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_04010 PF00155 Aminotransferase class I and II E3U39_04015 PF13411 MerR HTH family regulatory protein E3U39_04020 PF00571 CBS domain E3U39_04020 PF03471 Transporter associated domain E3U39_04020 PF01595 Cyclin M transmembrane N-terminal domain E3U39_04025 PF01553 Acyltransferase E3U39_04030 PF04542 Sigma-70 region 2 E3U39_04030 PF08281 Sigma-70, region 4 E3U39_04035 PF13791 Sigma factor regulator C-terminal E3U39_04035 PF13800 Sigma factor regulator N-terminal E3U39_04040 PF17453 Sigma-M inhibitor E3U39_04045 PF00209 Sodium:neurotransmitter symporter family E3U39_04050 PF13520 Amino acid permease E3U39_04060 PF00285 Citrate synthase, C-terminal domain E3U39_04065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3U39_04065 PF03466 LysR substrate binding domain E3U39_04070 PF00877 NlpC/P60 family E3U39_04070 PF01476 LysM domain E3U39_04075 PF00245 Alkaline phosphatase E3U39_04080 PF04293 SpoVR like protein E3U39_04085 PF05552 Conserved TM helix E3U39_04095 PF02082 Transcriptional regulator E3U39_04100 PF01476 LysM domain E3U39_04100 PF00877 NlpC/P60 family E3U39_04105 PF13028 Protein of unknown function (DUF3889) E3U39_04110 PF14148 YhdB-like protein E3U39_04115 PF03358 NADPH-dependent FMN reductase E3U39_04120 PF00196 Bacterial regulatory proteins, luxR family E3U39_04120 PF00072 Response regulator receiver domain E3U39_04130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E3U39_04130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E3U39_04130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E3U39_04130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E3U39_04135 PF01266 FAD dependent oxidoreductase E3U39_04135 PF16901 C-terminal domain of alpha-glycerophosphate oxidase E3U39_04140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3U39_04140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3U39_04145 PF00230 Major intrinsic protein E3U39_04150 PF04309 Glycerol-3-phosphate responsive antiterminator E3U39_04155 PF00202 Aminotransferase class-III E3U39_04160 PF00795 Carbon-nitrogen hydrolase E3U39_04160 PF00583 Acetyltransferase (GNAT) family E3U39_04165 PF13419 Haloacid dehalogenase-like hydrolase E3U39_04170 PF00571 CBS domain E3U39_04175 PF17326 Family of unknown function (DUF5365) E3U39_04180 PF01479 S4 domain E3U39_04180 PF00849 RNA pseudouridylate synthase E3U39_04185 PF04203 Sortase domain E3U39_04190 PF02872 5'-nucleotidase, C-terminal domain E3U39_04190 PF00746 LPXTG cell wall anchor motif E3U39_04190 PF00149 Calcineurin-like phosphoesterase E3U39_04190 PF00565 Staphylococcal nuclease homologue E3U39_04195 PF07875 Coat F domain E3U39_04205 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) E3U39_04215 PF00375 Sodium:dicarboxylate symporter family E3U39_04220 PF00990 Diguanylate cyclase, GGDEF domain E3U39_04220 PF07694 5TMR of 5TMR-LYT E3U39_04225 PF03180 NLPA lipoprotein E3U39_04235 PF00313 'Cold-shock' DNA-binding domain E3U39_04240 PF12679 ABC-2 family transporter protein E3U39_04245 PF00005 ABC transporter E3U39_04250 PF00005 ABC transporter E3U39_04255 PF00392 Bacterial regulatory proteins, gntR family E3U39_04270 PF03358 NADPH-dependent FMN reductase E3U39_04275 PF07690 Major Facilitator Superfamily E3U39_04285 PF01047 MarR family E3U39_04290 PF04285 Protein of unknown function (DUF444) E3U39_04295 PF06798 PrkA serine protein kinase C-terminal domain E3U39_04295 PF08298 PrkA AAA domain E3U39_04305 PF04519 Polymer-forming cytoskeletal E3U39_04310 PF13171 Protein of unknown function (DUF4004) E3U39_04315 PF00588 SpoU rRNA Methylase family E3U39_04320 PF12671 Putative amidase domain E3U39_04325 PF08331 Domain of unknown function (DUF1730) E3U39_04340 PF01381 Helix-turn-helix E3U39_04350 PF00253 Ribosomal protein S14p/S29e E3U39_04355 PF00296 Luciferase-like monooxygenase E3U39_04360 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_04365 PF09084 NMT1/THI5 like E3U39_04370 PF00005 ABC transporter E3U39_04385 PF00199 Catalase E3U39_04385 PF06628 Catalase-related immune-responsive E3U39_04390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3U39_04390 PF00005 ABC transporter E3U39_04395 PF00005 ABC transporter E3U39_04395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E3U39_04400 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_04400 PF12911 N-terminal TM domain of oligopeptide transport permease C E3U39_04405 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_04410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E3U39_04415 PF13040 Fur-regulated basic protein B E3U39_04420 PF01565 FAD binding domain E3U39_04420 PF08031 Berberine and berberine like E3U39_04425 PF13667 ThiC-associated domain E3U39_04425 PF01964 Radical SAM ThiC family E3U39_04430 PF03575 Peptidase family S51 E3U39_04535 PF18576 Helix-turn-helix domain E3U39_04535 PF14540 Nucleotidyltransferase-like E3U39_04540 PF11023 Zinc-ribbon containing domain E3U39_04545 PF01475 Ferric uptake regulator family E3U39_04550 PF00578 AhpC/TSA family E3U39_04555 PF00202 Aminotransferase class-III E3U39_04560 PF06081 Aromatic acid exporter family member 1 E3U39_04565 PF00005 ABC transporter E3U39_04565 PF00664 ABC transporter transmembrane region E3U39_04570 PF04167 Protein of unknown function (DUF402) E3U39_04575 PF14182 YgaB-like protein E3U39_04580 PF04259 Small, acid-soluble spore protein, gamma-type E3U39_04595 PF14815 NUDIX domain E3U39_04595 PF00730 HhH-GPD superfamily base excision DNA repair protein E3U39_04600 PF04307 LexA-binding, inner membrane-associated putative hydrolase E3U39_04605 PF09586 Bacterial membrane protein YfhO E3U39_04610 PF00535 Glycosyl transferase family 2 E3U39_04615 PF00561 alpha/beta hydrolase fold E3U39_04620 PF13630 SdpI/YhfL protein family E3U39_04625 PF08239 Bacterial SH3 domain E3U39_04630 PF14043 WVELL protein E3U39_04635 PF08176 Small acid-soluble spore protein K family E3U39_04640 PF00089 Trypsin E3U39_04645 PF10794 Protein of unknown function (DUF2606) E3U39_04650 PF07690 Major Facilitator Superfamily E3U39_04655 PF08838 Protein of unknown function (DUF1811) E3U39_04660 PF02631 RecX family E3U39_04665 PF01370 NAD dependent epimerase/dehydratase family E3U39_04665 PF08338 Domain of unknown function (DUF1731) E3U39_04670 PF14152 YfhE-like protein E3U39_04675 PF14151 YfhD-like protein E3U39_04680 PF00881 Nitroreductase family E3U39_04685 PF02567 Phenazine biosynthesis-like protein E3U39_04690 PF03706 Lysylphosphatidylglycerol synthase TM region E3U39_04690 PF09924 Uncharacterised conserved protein (DUF2156) E3U39_04695 PF01047 MarR family E3U39_04700 PF07690 Major Facilitator Superfamily E3U39_04705 PF12867 DinB superfamily E3U39_04710 PF01337 Barstar (barnase inhibitor) E3U39_04715 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E3U39_04715 PF00391 PEP-utilising enzyme, mobile domain E3U39_04725 PF01757 Acyltransferase family E3U39_04730 PF02525 Flavodoxin-like fold E3U39_04735 PF03551 Transcriptional regulator PadR-like family E3U39_04735 PF10400 Virulence activator alpha C-term E3U39_04740 PF01040 UbiA prenyltransferase family E3U39_04750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E3U39_04755 PF07681 DoxX E3U39_04760 PF00664 ABC transporter transmembrane region E3U39_04760 PF00005 ABC transporter E3U39_04765 PF00005 ABC transporter E3U39_04765 PF00664 ABC transporter transmembrane region E3U39_04770 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain E3U39_04770 PF12708 Pectate lyase superfamily protein E3U39_04775 PF02378 Phosphotransferase system, EIIC E3U39_04775 PF00367 phosphotransferase system, EIIB E3U39_04780 PF01380 SIS domain E3U39_04780 PF01418 Helix-turn-helix domain, rpiR family E3U39_04785 PF11975 Family 4 glycosyl hydrolase C-terminal domain E3U39_04785 PF02056 Family 4 glycosyl hydrolase E3U39_04790 PF08141 Small acid-soluble spore protein H family E3U39_04795 PF01590 GAF domain E3U39_04795 PF02954 Bacterial regulatory protein, Fis family E3U39_04795 PF00158 Sigma-54 interaction domain E3U39_04800 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3U39_04800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E3U39_04805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E3U39_04805 PF00364 Biotin-requiring enzyme E3U39_04805 PF02817 e3 binding domain E3U39_04810 PF02779 Transketolase, pyrimidine binding domain E3U39_04810 PF02780 Transketolase, C-terminal domain E3U39_04815 PF00676 Dehydrogenase E1 component E3U39_04825 PF01207 Dihydrouridine synthase (Dus) E3U39_04840 PF01938 TRAM domain E3U39_04840 PF05958 tRNA (Uracil-5-)-methyltransferase E3U39_04845 PF00730 HhH-GPD superfamily base excision DNA repair protein E3U39_04850 PF01544 CorA-like Mg2+ transporter protein E3U39_04860 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase E3U39_04860 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E3U39_04865 PF01522 Polysaccharide deacetylase E3U39_04875 PF08756 YfkB-like domain E3U39_04875 PF04055 Radical SAM superfamily E3U39_04880 PF00924 Mechanosensitive ion channel E3U39_04885 PF14167 YfkD-like protein E3U39_04890 PF01699 Sodium/calcium exchanger protein E3U39_04895 PF07690 Major Facilitator Superfamily E3U39_04900 PF03631 Virulence factor BrkB E3U39_04910 PF01451 Low molecular weight phosphotyrosine protein phosphatase E3U39_04915 PF06569 Protein of unknown function (DUF1128) E3U39_04920 PF07690 Major Facilitator Superfamily E3U39_04925 PF01487 Type I 3-dehydroquinase E3U39_04930 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E3U39_04930 PF08501 Shikimate dehydrogenase substrate binding domain E3U39_04935 PF00356 Bacterial regulatory proteins, lacI family E3U39_04940 PF01965 DJ-1/PfpI family E3U39_04945 PF00149 Calcineurin-like phosphoesterase E3U39_04945 PF02872 5'-nucleotidase, C-terminal domain E3U39_04960 PF00881 Nitroreductase family E3U39_04965 PF00392 Bacterial regulatory proteins, gntR family E3U39_04965 PF07702 UTRA domain E3U39_04970 PF00128 Alpha amylase, catalytic domain E3U39_04970 PF16657 Maltogenic Amylase, C-terminal domain E3U39_04975 PF02378 Phosphotransferase system, EIIC E3U39_04975 PF00367 phosphotransferase system, EIIB E3U39_04980 PF10676 Spore germination protein gerPA/gerPF E3U39_04985 PF10676 Spore germination protein gerPA/gerPF E3U39_04990 PF00011 Hsp20/alpha crystallin family E3U39_04995 PF09350 Domain of unknown function (DUF1992) E3U39_05000 PF00884 Sulfatase E3U39_05005 PF10787 Uncharacterised protein from bacillus cereus group E3U39_05010 PF00367 phosphotransferase system, EIIB E3U39_05010 PF02378 Phosphotransferase system, EIIC E3U39_05015 PF00557 Metallopeptidase family M24 E3U39_05020 PF11588 Protein of unknown function (DUF3243) E3U39_05030 PF11121 Protein of unknown function (DUF2639) E3U39_05035 PF03473 MOSC domain E3U39_05035 PF03475 3-alpha domain E3U39_05040 PF00708 Acylphosphatase E3U39_05045 PF02898 Nitric oxide synthase, oxygenase domain E3U39_05050 PF00753 Metallo-beta-lactamase superfamily E3U39_05055 PF03600 Citrate transporter E3U39_05060 PF03401 Tripartite tricarboxylate transporter family receptor E3U39_05065 PF12431 Transcriptional regulator E3U39_05065 PF00072 Response regulator receiver domain E3U39_05065 PF08279 HTH domain E3U39_05070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_05070 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E3U39_05090 PF00939 Sodium:sulfate symporter transmembrane region E3U39_05095 PF00544 Pectate lyase E3U39_05100 PF11181 Heat induced stress protein YflT E3U39_05105 PF11486 Protein of unknown function (DUF3212) E3U39_05110 PF00107 Zinc-binding dehydrogenase E3U39_05110 PF16884 N-terminal domain of oxidoreductase E3U39_05115 PF00583 Acetyltransferase (GNAT) family E3U39_05120 PF00270 DEAD/DEAH box helicase E3U39_05120 PF00271 Helicase conserved C-terminal domain E3U39_05125 PF00005 ABC transporter E3U39_05125 PF12848 ABC transporter E3U39_05130 PF07690 Major Facilitator Superfamily E3U39_05135 PF13411 MerR HTH family regulatory protein E3U39_05140 PF16326 ABC transporter C-terminal domain E3U39_05140 PF12848 ABC transporter E3U39_05140 PF00005 ABC transporter E3U39_05145 PF00535 Glycosyl transferase family 2 E3U39_05145 PF13181 Tetratricopeptide repeat E3U39_05155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3U39_05160 PF00171 Aldehyde dehydrogenase family E3U39_05165 PF13520 Amino acid permease E3U39_05170 PF07690 Major Facilitator Superfamily E3U39_05175 PF03407 Nucleotide-diphospho-sugar transferase E3U39_05180 PF00535 Glycosyl transferase family 2 E3U39_05185 PF03407 Nucleotide-diphospho-sugar transferase E3U39_05190 PF16363 GDP-mannose 4,6 dehydratase E3U39_05195 PF00483 Nucleotidyl transferase E3U39_05200 PF00884 Sulfatase E3U39_05205 PF00258 Flavodoxin E3U39_05205 PF00175 Oxidoreductase NAD-binding domain E3U39_05205 PF00067 Cytochrome P450 E3U39_05205 PF00667 FAD binding domain E3U39_05210 PF13037 Domain of unknown function (DUF3898) E3U39_05210 PF13039 Protein of unknown function (DUF3900) E3U39_05215 PF01494 FAD binding domain E3U39_05220 PF01047 MarR family E3U39_05230 PF01027 Inhibitor of apoptosis-promoting Bax1 E3U39_05235 PF01687 Riboflavin kinase E3U39_05240 PF10055 Uncharacterized small protein (DUF2292) E3U39_05245 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain E3U39_05245 PF01740 STAS domain E3U39_05250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E3U39_05255 PF03992 Antibiotic biosynthesis monooxygenase E3U39_05260 PF04239 Protein of unknown function (DUF421) E3U39_05270 PF00583 Acetyltransferase (GNAT) family E3U39_05275 PF05067 Manganese containing catalase E3U39_05280 PF12652 CotJB protein E3U39_05285 PF11007 Spore coat associated protein JA (CotJA) E3U39_05295 PF01709 Transcriptional regulator E3U39_05300 PF18593 CdiI immunity protein E3U39_05305 PF04740 LXG domain of WXG superfamily E3U39_05310 PF04634 Protein of unknown function, DUF600 E3U39_05315 PF04634 Protein of unknown function, DUF600 E3U39_05320 PF04634 Protein of unknown function, DUF600 E3U39_05335 PF00005 ABC transporter E3U39_05345 PF05958 tRNA (Uracil-5-)-methyltransferase E3U39_05345 PF01938 TRAM domain E3U39_05350 PF00781 Diacylglycerol kinase catalytic domain E3U39_05355 PF00873 AcrB/AcrD/AcrF family E3U39_05360 PF00440 Bacterial regulatory proteins, tetR family E3U39_05365 PF02637 GatB domain E3U39_05365 PF02934 GatB/GatE catalytic domain E3U39_05370 PF01425 Amidase E3U39_05375 PF02686 Glu-tRNAGln amidotransferase C subunit E3U39_05380 PF00474 Sodium:solute symporter family E3U39_05385 PF02308 MgtC family E3U39_05390 PF01636 Phosphotransferase enzyme family E3U39_05395 PF07537 CamS sex pheromone cAM373 precursor E3U39_05400 PF03119 NAD-dependent DNA ligase C4 zinc finger domain E3U39_05400 PF12826 Helix-hairpin-helix motif E3U39_05400 PF03120 NAD-dependent DNA ligase OB-fold domain E3U39_05400 PF01653 NAD-dependent DNA ligase adenylation domain E3U39_05400 PF00533 BRCA1 C Terminus (BRCT) domain E3U39_05405 PF13361 UvrD-like helicase C-terminal domain E3U39_05405 PF00580 UvrD/REP helicase N-terminal domain E3U39_05410 PF01884 PcrB family E3U39_05415 PF01645 Conserved region in glutamate synthase E3U39_05420 PF01371 Trp repressor protein E3U39_05425 PF11258 Protein of unknown function (DUF3048) N-terminal domain E3U39_05425 PF17479 Protein of unknown function (DUF3048) C-terminal domain E3U39_05430 PF13382 Adenine deaminase C-terminal domain E3U39_05430 PF01979 Amidohydrolase family E3U39_05435 PF11127 Protein of unknown function (DUF2892) E3U39_05440 PF02844 Phosphoribosylglycinamide synthetase, N domain E3U39_05440 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E3U39_05440 PF02843 Phosphoribosylglycinamide synthetase, C domain E3U39_05445 PF01808 AICARFT/IMPCHase bienzyme E3U39_05445 PF02142 MGS-like domain E3U39_05450 PF00551 Formyl transferase E3U39_05455 PF00586 AIR synthase related protein, N-terminal domain E3U39_05455 PF02769 AIR synthase related protein, C-terminal domain E3U39_05460 PF00156 Phosphoribosyl transferase domain E3U39_05465 PF00586 AIR synthase related protein, N-terminal domain E3U39_05465 PF02769 AIR synthase related protein, C-terminal domain E3U39_05465 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E3U39_05475 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase E3U39_05480 PF01259 SAICAR synthetase E3U39_05485 PF00206 Lyase E3U39_05485 PF10397 Adenylosuccinate lyase C-terminus E3U39_05490 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain E3U39_05490 PF02222 ATP-grasp domain E3U39_05495 PF00731 AIR carboxylase E3U39_05500 PF14044 NETI protein E3U39_05505 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E3U39_05510 PF13076 Fur-regulated basic protein A E3U39_05520 PF00860 Permease family E3U39_05530 PF04545 Sigma-70, region 4 E3U39_05530 PF04542 Sigma-70 region 2 E3U39_05540 PF00117 Glutamine amidotransferase class-I E3U39_05540 PF02540 NAD synthase E3U39_05540 PF00958 GMP synthase C terminal domain E3U39_05545 PF11992 Domain of unknown function (DUF3488) E3U39_05545 PF01841 Transglutaminase-like superfamily E3U39_05545 PF13559 Domain of unknown function (DUF4129) E3U39_05550 PF01882 Protein of unknown function DUF58 E3U39_05555 PF17863 AAA lid domain E3U39_05555 PF07726 ATPase family associated with various cellular activities (AAA) E3U39_05560 PF01545 Cation efflux family E3U39_05560 PF16916 Dimerisation domain of Zinc Transporter E3U39_05565 PF00324 Amino acid permease E3U39_05570 PF00394 Multicopper oxidase E3U39_05570 PF07731 Multicopper oxidase E3U39_05570 PF07732 Multicopper oxidase E3U39_05575 PF14169 Cold-inducible protein YdjO E3U39_05580 PF07676 WD40-like Beta Propeller Repeat E3U39_05585 PF03330 Lytic transglycolase E3U39_05590 PF08240 Alcohol dehydrogenase GroES-like domain E3U39_05590 PF00107 Zinc-binding dehydrogenase E3U39_05595 PF04542 Sigma-70 region 2 E3U39_05595 PF08281 Sigma-70, region 4 E3U39_05600 PF13739 Deacetylase PdaC E3U39_05600 PF11738 Protein of unknown function (DUF3298) E3U39_05605 PF01757 Acyltransferase family E3U39_05610 PF13421 SPFH domain-Band 7 family E3U39_05615 PF04536 TPM domain E3U39_05620 PF08271 TFIIB zinc-binding E3U39_05625 PF04012 PspA/IM30 family E3U39_05630 PF14154 Domain of unknown function (DUF4306) E3U39_05635 PF00294 pfkB family carbohydrate kinase E3U39_05645 PF08240 Alcohol dehydrogenase GroES-like domain E3U39_05645 PF00107 Zinc-binding dehydrogenase E3U39_05650 PF00931 NB-ARC domain E3U39_05650 PF13176 Tetratricopeptide repeat E3U39_05675 PF01510 N-acetylmuramoyl-L-alanine amidase E3U39_05675 PF01471 Putative peptidoglycan binding domain E3U39_05680 PF04688 SPP1 phage holin E3U39_05685 PF10779 Haemolysin XhlA E3U39_05735 PF00704 Glycosyl hydrolases family 18 E3U39_05735 PF00041 Fibronectin type III domain E3U39_05800 PF10668 Phage terminase small subunit E3U39_05825 PF08281 Sigma-70, region 4 E3U39_05900 PF17356 Phage-like element PBSX protein XtrA E3U39_05920 PF01695 IstB-like ATP binding protein E3U39_05925 PF07261 Replication initiation and membrane attachment E3U39_05935 PF03837 RecT family E3U39_05940 PF09588 YqaJ-like viral recombinase domain E3U39_05955 PF09466 Hypothetical protein Yqai E3U39_05965 PF17448 Uncharacterized YqaH-like E3U39_05970 PF01381 Helix-turn-helix E3U39_05990 PF01381 Helix-turn-helix E3U39_06000 PF06114 IrrE N-terminal-like domain E3U39_06010 PF00118 TCP-1/cpn60 chaperonin family E3U39_06015 PF00166 Chaperonin 10 Kd subunit E3U39_06020 PF02517 CPBP intramembrane metalloprotease E3U39_06025 PF14146 Domain of unknown function (DUF4305) E3U39_06030 PF00902 Sec-independent protein translocase protein (TatC) E3U39_06035 PF02416 mttA/Hcf106 family E3U39_06040 PF06971 Putative DNA-binding protein N-terminus E3U39_06040 PF02629 CoA binding domain E3U39_06045 PF01967 MoaC family E3U39_06050 PF16326 ABC transporter C-terminal domain E3U39_06050 PF12848 ABC transporter E3U39_06050 PF00005 ABC transporter E3U39_06055 PF00814 Glycoprotease family E3U39_06060 PF00583 Acetyltransferase (GNAT) family E3U39_06065 PF00814 Glycoprotease family E3U39_06070 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E3U39_06075 PF00586 AIR synthase related protein, N-terminal domain E3U39_06075 PF02769 AIR synthase related protein, C-terminal domain E3U39_06115 PF00083 Sugar (and other) transporter E3U39_06120 PF00107 Zinc-binding dehydrogenase E3U39_06120 PF08240 Alcohol dehydrogenase GroES-like domain E3U39_06125 PF08327 Activator of Hsp90 ATPase homolog 1-like protein E3U39_06135 PF13520 Amino acid permease E3U39_06140 PF00440 Bacterial regulatory proteins, tetR family E3U39_06140 PF17934 Tetracyclin repressor-like, C-terminal domain E3U39_06145 PF00893 Small Multidrug Resistance protein E3U39_06150 PF00893 Small Multidrug Resistance protein E3U39_06155 PF07690 Major Facilitator Superfamily E3U39_06160 PF00392 Bacterial regulatory proteins, gntR family E3U39_06160 PF07729 FCD domain E3U39_06165 PF07702 UTRA domain E3U39_06165 PF00392 Bacterial regulatory proteins, gntR family E3U39_06170 PF07690 Major Facilitator Superfamily E3U39_06175 PF07563 Protein of unknown function (DUF1541) E3U39_06180 PF11954 Domain of unknown function (DUF3471) E3U39_06180 PF00144 Beta-lactamase E3U39_06195 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase E3U39_06200 PF00392 Bacterial regulatory proteins, gntR family E3U39_06200 PF07729 FCD domain E3U39_06205 PF00180 Isocitrate/isopropylmalate dehydrogenase E3U39_06210 PF08241 Methyltransferase domain E3U39_06215 PF00293 NUDIX domain E3U39_06225 PF00583 Acetyltransferase (GNAT) family E3U39_06230 PF01925 Sulfite exporter TauE/SafE E3U39_06240 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_06240 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_06245 PF07690 Major Facilitator Superfamily E3U39_06250 PF00465 Iron-containing alcohol dehydrogenase E3U39_06255 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E3U39_06255 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E3U39_06260 PF13302 Acetyltransferase (GNAT) domain E3U39_06270 PF07722 Peptidase C26 E3U39_06275 PF03176 MMPL family E3U39_06280 PF00072 Response regulator receiver domain E3U39_06280 PF00196 Bacterial regulatory proteins, luxR family E3U39_06285 PF07730 Histidine kinase E3U39_06285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_06300 PF07875 Coat F domain E3U39_06305 PF13823 Alcohol dehydrogenase GroES-associated E3U39_06305 PF00107 Zinc-binding dehydrogenase E3U39_06305 PF08240 Alcohol dehydrogenase GroES-like domain E3U39_06315 PF07875 Coat F domain E3U39_06320 PF00392 Bacterial regulatory proteins, gntR family E3U39_06320 PF00155 Aminotransferase class I and II E3U39_06325 PF00892 EamA-like transporter family E3U39_06330 PF16859 Tetracyclin repressor-like, C-terminal domain E3U39_06330 PF00440 Bacterial regulatory proteins, tetR family E3U39_06335 PF07690 Major Facilitator Superfamily E3U39_06350 PF00155 Aminotransferase class I and II E3U39_06350 PF00392 Bacterial regulatory proteins, gntR family E3U39_06360 PF13411 MerR HTH family regulatory protein E3U39_06365 PF00107 Zinc-binding dehydrogenase E3U39_06365 PF08240 Alcohol dehydrogenase GroES-like domain E3U39_06375 PF00293 NUDIX domain E3U39_06375 PF13344 Haloacid dehalogenase-like hydrolase E3U39_06380 PF08543 Phosphomethylpyrimidine kinase E3U39_06385 PF13649 Methyltransferase domain E3U39_06405 PF04055 Radical SAM superfamily E3U39_06415 PF00701 Dihydrodipicolinate synthetase family E3U39_06420 PF12867 DinB superfamily E3U39_06425 PF07883 Cupin domain E3U39_06440 PF16916 Dimerisation domain of Zinc Transporter E3U39_06440 PF01545 Cation efflux family E3U39_06450 PF01565 FAD binding domain E3U39_06450 PF08031 Berberine and berberine like E3U39_06465 PF07883 Cupin domain E3U39_06475 PF01734 Patatin-like phospholipase E3U39_06490 PF01177 Asp/Glu/Hydantoin racemase E3U39_06495 PF01925 Sulfite exporter TauE/SafE E3U39_06500 PF01206 Sulfurtransferase TusA E3U39_06505 PF00753 Metallo-beta-lactamase superfamily E3U39_06505 PF00581 Rhodanese-like domain E3U39_06510 PF01206 Sulfurtransferase TusA E3U39_06510 PF00581 Rhodanese-like domain E3U39_06520 PF13686 DsrE/DsrF/DrsH-like family E3U39_06525 PF02583 Metal-sensitive transcriptional repressor E3U39_06530 PF02559 CarD-like/TRCF domain E3U39_06535 PF00313 'Cold-shock' DNA-binding domain E3U39_06545 PF13460 NAD(P)H-binding E3U39_06550 PF02082 Transcriptional regulator E3U39_06565 PF01575 MaoC like domain E3U39_06570 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) E3U39_06585 PF07690 Major Facilitator Superfamily E3U39_06590 PF02028 BCCT, betaine/carnitine/choline family transporter E3U39_06600 PF18801 response regulator aspartate phosphatase H, N terminal E3U39_06605 PF01370 NAD dependent epimerase/dehydratase family E3U39_06605 PF08338 Domain of unknown function (DUF1731) E3U39_06610 PF02525 Flavodoxin-like fold E3U39_06615 PF02082 Transcriptional regulator E3U39_06670 PF10263 SprT-like family E3U39_06680 PF00575 S1 RNA binding domain E3U39_06680 PF17674 HHH domain E3U39_06680 PF16921 Tex protein YqgF-like domain E3U39_06680 PF09371 Tex-like protein N-terminal domain E3U39_06685 PF07228 Stage II sporulation protein E (SpoIIE) E3U39_06690 PF04542 Sigma-70 region 2 E3U39_06690 PF04539 Sigma-70 region 3 E3U39_06690 PF04545 Sigma-70, region 4 E3U39_06695 PF13581 Histidine kinase-like ATPase domain E3U39_06700 PF01740 STAS domain E3U39_06705 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain E3U39_06705 PF07228 Stage II sporulation protein E (SpoIIE) E3U39_06710 PF13581 Histidine kinase-like ATPase domain E3U39_06715 PF01740 STAS domain E3U39_06720 PF08678 Rsbr N terminal E3U39_06720 PF01740 STAS domain E3U39_06725 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system E3U39_06730 PF01402 Ribbon-helix-helix protein, copG family E3U39_06735 PF00842 Alanine racemase, C-terminal domain E3U39_06735 PF01168 Alanine racemase, N-terminal domain E3U39_06745 PF01648 4'-phosphopantetheinyl transferase superfamily E3U39_06750 PF01694 Rhomboid family E3U39_06755 PF03703 Bacterial PH domain E3U39_06760 PF03703 Bacterial PH domain E3U39_06765 PF00271 Helicase conserved C-terminal domain E3U39_06765 PF00270 DEAD/DEAH box helicase E3U39_06770 PF08245 Mur ligase middle domain E3U39_06770 PF02875 Mur ligase family, glutamate ligase domain E3U39_06770 PF01225 Mur ligase family, catalytic domain E3U39_06775 PF01820 D-ala D-ala ligase N-terminus E3U39_06775 PF07478 D-ala D-ala ligase C-terminus E3U39_06780 PF00085 Thioredoxin E3U39_06785 PF16916 Dimerisation domain of Zinc Transporter E3U39_06785 PF01545 Cation efflux family E3U39_06795 PF13040 Fur-regulated basic protein B E3U39_06800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E3U39_06800 PF02770 Acyl-CoA dehydrogenase, middle domain E3U39_06800 PF08028 Acyl-CoA dehydrogenase, C-terminal domain E3U39_06815 PF00005 ABC transporter E3U39_06820 PF01594 AI-2E family transporter E3U39_06825 PF00375 Sodium:dicarboxylate symporter family E3U39_06830 PF00072 Response regulator receiver domain E3U39_06830 PF08279 HTH domain E3U39_06835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_06835 PF17203 Single cache domain 3 E3U39_06835 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E3U39_06840 PF03480 Bacterial extracellular solute-binding protein, family 7 E3U39_06845 PF05067 Manganese containing catalase E3U39_06850 PF16291 Domain of unknown function (DUF4937 E3U39_06855 PF07883 Cupin domain E3U39_06860 PF10685 Stress-induced bacterial acidophilic repeat motif E3U39_06860 PF00477 Small hydrophilic plant seed protein E3U39_06865 PF12787 EcsC protein family E3U39_06870 PF00893 Small Multidrug Resistance protein E3U39_06875 PF17314 Family of unknown function (DUF5360) E3U39_06900 PF01566 Natural resistance-associated macrophage protein E3U39_06950 PF01471 Putative peptidoglycan binding domain E3U39_06950 PF01476 LysM domain E3U39_06950 PF01510 N-acetylmuramoyl-L-alanine amidase E3U39_06955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3U39_06955 PF00205 Thiamine pyrophosphate enzyme, central domain E3U39_06955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3U39_06965 PF13520 Amino acid permease E3U39_06970 PF03170 Bacterial cellulose synthase subunit E3U39_06980 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) E3U39_06985 PF00990 Diguanylate cyclase, GGDEF domain E3U39_06995 PF01131 DNA topoisomerase E3U39_06995 PF01751 Toprim domain E3U39_07000 PF01037 Lrp/AsnC ligand binding domain E3U39_07005 PF12823 Domain of unknown function (DUF3817) E3U39_07010 PF10997 Alternate to MurJ E3U39_07015 PF16242 Pyridoxamine 5'-phosphate oxidase like E3U39_07020 PF13302 Acetyltransferase (GNAT) domain E3U39_07035 PF13193 AMP-binding enzyme C-terminal domain E3U39_07035 PF00501 AMP-binding enzyme E3U39_07040 PF00874 PRD domain E3U39_07040 PF08279 HTH domain E3U39_07040 PF05043 Mga helix-turn-helix domain E3U39_07040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3U39_07040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3U39_07045 PF00248 Aldo/keto reductase family E3U39_07050 PF05223 NTF2-like N-terminal transpeptidase domain E3U39_07050 PF00905 Penicillin binding protein transpeptidase domain E3U39_07050 PF03717 Penicillin-binding Protein dimerisation domain E3U39_07055 PF03992 Antibiotic biosynthesis monooxygenase E3U39_07060 PF13129 Protein of unknown function (DUF3953) E3U39_07065 PF13472 GDSL-like Lipase/Acylhydrolase family E3U39_07070 PF09339 IclR helix-turn-helix domain E3U39_07070 PF01614 Bacterial transcriptional regulator E3U39_07075 PF02626 Carboxyltransferase domain, subdomain A and B E3U39_07080 PF02682 Carboxyltransferase domain, subdomain C and D E3U39_07085 PF07286 Protein of unknown function (DUF1445) E3U39_07090 PF01566 Natural resistance-associated macrophage protein E3U39_07095 PF03746 LamB/YcsF family E3U39_07110 PF07977 FabA-like domain E3U39_07115 PF01232 Mannitol dehydrogenase Rossmann domain E3U39_07115 PF08125 Mannitol dehydrogenase C-terminal domain E3U39_07120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3U39_07125 PF02378 Phosphotransferase system, EIIC E3U39_07125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3U39_07135 PF05573 NosL E3U39_07135 PF08220 DeoR-like helix-turn-helix domain E3U39_07140 PF04234 CopC domain E3U39_07140 PF13115 YtkA-like E3U39_07140 PF05425 Copper resistance protein D E3U39_07145 PF07987 Domain of unkown function (DUF1775) E3U39_07155 PF06800 Sugar transport protein E3U39_07160 PF00171 Aldehyde dehydrogenase family E3U39_07165 PF00202 Aminotransferase class-III E3U39_07170 PF00392 Bacterial regulatory proteins, gntR family E3U39_07170 PF00155 Aminotransferase class I and II E3U39_07175 PF01022 Bacterial regulatory protein, arsR family E3U39_07180 PF03992 Antibiotic biosynthesis monooxygenase E3U39_07185 PF00881 Nitroreductase family E3U39_07190 PF00440 Bacterial regulatory proteins, tetR family E3U39_07195 PF07690 Major Facilitator Superfamily E3U39_07200 PF01497 Periplasmic binding protein E3U39_07205 PF00005 ABC transporter E3U39_07210 PF01032 FecCD transport family E3U39_07215 PF01032 FecCD transport family E3U39_07220 PF00696 Amino acid kinase family E3U39_07220 PF13840 ACT domain E3U39_07225 PF09680 Family of unknown function E3U39_07230 PF11131 Rap-phr extracellular signalling E3U39_07235 PF18801 response regulator aspartate phosphatase H, N terminal E3U39_07240 PF00672 HAMP domain E3U39_07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_07240 PF00512 His Kinase A (phospho-acceptor) domain E3U39_07245 PF00072 Response regulator receiver domain E3U39_07245 PF00486 Transcriptional regulatory protein, C terminal E3U39_07250 PF02687 FtsX-like permease family E3U39_07250 PF12704 MacB-like periplasmic core domain E3U39_07255 PF00005 ABC transporter E3U39_07260 PF03972 MmgE/PrpD family E3U39_07270 PF00005 ABC transporter E3U39_07275 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_07280 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3U39_07295 PF03845 Spore germination protein E3U39_07300 PF05504 Spore germination B3/ GerAC like, C-terminal E3U39_07305 PF03323 Bacillus/Clostridium GerA spore germination protein E3U39_07315 PF13229 Right handed beta helix region E3U39_07315 PF12708 Pectate lyase superfamily protein E3U39_07320 PF00854 POT family E3U39_07335 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase E3U39_07340 PF02441 Flavoprotein E3U39_07345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3U39_07345 PF03466 LysR substrate binding domain E3U39_07350 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3U39_07355 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_07360 PF00005 ABC transporter E3U39_07370 PF01648 4'-phosphopantetheinyl transferase superfamily E3U39_07375 PF07685 CobB/CobQ-like glutamine amidotransferase domain E3U39_07375 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E3U39_07375 PF00155 Aminotransferase class I and II E3U39_07380 PF00975 Thioesterase domain E3U39_07385 PF13193 AMP-binding enzyme C-terminal domain E3U39_07385 PF00550 Phosphopantetheine attachment site E3U39_07385 PF00501 AMP-binding enzyme E3U39_07385 PF00975 Thioesterase domain E3U39_07385 PF00668 Condensation domain E3U39_07390 PF13193 AMP-binding enzyme C-terminal domain E3U39_07390 PF00668 Condensation domain E3U39_07390 PF00550 Phosphopantetheine attachment site E3U39_07390 PF00501 AMP-binding enzyme E3U39_07395 PF00550 Phosphopantetheine attachment site E3U39_07395 PF13193 AMP-binding enzyme C-terminal domain E3U39_07395 PF00668 Condensation domain E3U39_07395 PF00501 AMP-binding enzyme E3U39_07400 PF01638 HxlR-like helix-turn-helix E3U39_07405 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E3U39_07410 PF01380 SIS domain E3U39_07415 PF14040 Deoxyribonuclease NucA/NucB E3U39_07420 PF11033 Competence protein J (ComJ) E3U39_07425 PF00232 Glycosyl hydrolase family 1 E3U39_07430 PF10925 Protein of unknown function (DUF2680) E3U39_07435 PF06271 RDD family E3U39_07440 PF13823 Alcohol dehydrogenase GroES-associated E3U39_07440 PF08240 Alcohol dehydrogenase GroES-like domain E3U39_07440 PF00107 Zinc-binding dehydrogenase E3U39_07445 PF07683 Cobalamin synthesis protein cobW C-terminal domain E3U39_07445 PF02492 CobW/HypB/UreG, nucleotide-binding domain E3U39_07450 PF07690 Major Facilitator Superfamily E3U39_07455 PF04324 BFD-like [2Fe-2S] binding domain E3U39_07455 PF18267 Rubredoxin NAD+ reductase C-terminal domain E3U39_07455 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E3U39_07455 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3U39_07460 PF00384 Molybdopterin oxidoreductase E3U39_07460 PF01568 Molydopterin dinucleotide binding domain E3U39_07460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3U39_07465 PF04324 BFD-like [2Fe-2S] binding domain E3U39_07465 PF18267 Rubredoxin NAD+ reductase C-terminal domain E3U39_07465 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E3U39_07465 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E3U39_07465 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3U39_07470 PF00355 Rieske [2Fe-2S] domain E3U39_07475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E3U39_07480 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3U39_07485 PF13556 PucR C-terminal helix-turn-helix domain E3U39_07485 PF17853 GGDEF-like domain E3U39_07490 PF00474 Sodium:solute symporter family E3U39_07495 PF00171 Aldehyde dehydrogenase family E3U39_07500 PF01619 Proline dehydrogenase E3U39_07505 PF10127 RNA repair pathway DNA polymerase beta family E3U39_07510 PF05448 Acetyl xylan esterase (AXE1) E3U39_07515 PF01202 Shikimate kinase E3U39_07520 PF07690 Major Facilitator Superfamily E3U39_07525 PF01261 Xylose isomerase-like TIM barrel E3U39_07535 PF12197 Bacillus cereus group antimicrobial protein E3U39_07540 PF02540 NAD synthase E3U39_07545 PF09347 Domain of unknown function (DUF1989) E3U39_07550 PF00324 Amino acid permease E3U39_07555 PF08892 YqcI/YcgG family E3U39_07560 PF01810 LysE type translocator E3U39_07565 PF01047 MarR family E3U39_07570 PF07690 Major Facilitator Superfamily E3U39_07575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain E3U39_07575 PF00056 lactate/malate dehydrogenase, NAD binding domain E3U39_07580 PF00128 Alpha amylase, catalytic domain E3U39_07580 PF16738 Starch-binding module 26 E3U39_07590 PF03606 C4-dicarboxylate anaerobic carrier E3U39_07595 PF07687 Peptidase dimerisation domain E3U39_07595 PF01546 Peptidase family M20/M25/M40 E3U39_07600 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E3U39_07605 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_07610 PF00005 ABC transporter E3U39_07610 PF00571 CBS domain E3U39_07615 PF07690 Major Facilitator Superfamily E3U39_07620 PF05816 Toxic anion resistance protein (TelA) E3U39_07625 PF14266 Putative component of 'biosynthetic module' E3U39_07630 PF03741 Integral membrane protein TerC family E3U39_07635 PF02342 TerD domain E3U39_07640 PF02342 TerD domain E3U39_07645 PF02342 TerD domain E3U39_07650 PF00296 Luciferase-like monooxygenase E3U39_07655 PF00950 ABC 3 transport family E3U39_07660 PF00005 ABC transporter E3U39_07665 PF01297 Zinc-uptake complex component A periplasmic E3U39_07670 PF00128 Alpha amylase, catalytic domain E3U39_07680 PF18801 response regulator aspartate phosphatase H, N terminal E3U39_07685 PF13539 D-alanyl-D-alanine carboxypeptidase E3U39_07690 PF16244 Domain of unknown function (DUF4901) E3U39_07695 PF16244 Domain of unknown function (DUF4901) E3U39_07700 PF17118 Domain of unknown function (DUF5105) E3U39_07700 PF11611 Domain of unknown function (DUF4352) E3U39_07705 PF00248 Aldo/keto reductase family E3U39_07710 PF05225 helix-turn-helix, Psq domain E3U39_07710 PF02810 SEC-C motif E3U39_07715 PF01674 Lipase (class 2) E3U39_07720 PF17763 Glutaminase/Asparaginase C-terminal domain E3U39_07720 PF00710 Asparaginase, N-terminal E3U39_07725 PF00440 Bacterial regulatory proteins, tetR family E3U39_07730 PF07690 Major Facilitator Superfamily E3U39_07735 PF00266 Aminotransferase class-V E3U39_07740 PF01470 Pyroglutamyl peptidase E3U39_07745 PF00902 Sec-independent protein translocase protein (TatC) E3U39_07750 PF02416 mttA/Hcf106 family E3U39_07755 PF09423 PhoD-like phosphatase E3U39_07755 PF16655 PhoD-like phosphatase, N-terminal domain E3U39_07765 PF07486 Cell Wall Hydrolase E3U39_07775 PF10710 Protein of unknown function (DUF2512) E3U39_07780 PF00085 Thioredoxin E3U39_07785 PF07681 DoxX E3U39_07790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E3U39_07795 PF00881 Nitroreductase family E3U39_07800 PF01545 Cation efflux family E3U39_07800 PF16916 Dimerisation domain of Zinc Transporter E3U39_07810 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein E3U39_07820 PF00072 Response regulator receiver domain E3U39_07820 PF08664 YcbB domain E3U39_07825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_07830 PF04960 Glutaminase E3U39_07835 PF01235 Sodium:alanine symporter family E3U39_07840 PF02574 Homocysteine S-methyltransferase E3U39_07845 PF00324 Amino acid permease E3U39_07850 PF01063 Amino-transferase class IV E3U39_07855 PF00375 Sodium:dicarboxylate symporter family E3U39_07870 PF02666 Phosphatidylserine decarboxylase E3U39_07875 PF09335 SNARE associated Golgi protein E3U39_07880 PF01066 CDP-alcohol phosphatidyltransferase E3U39_07885 PF02222 ATP-grasp domain E3U39_07890 PF00465 Iron-containing alcohol dehydrogenase E3U39_07905 PF08924 Domain of unknown function (DUF1906) E3U39_07905 PF01471 Putative peptidoglycan binding domain E3U39_07915 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal E3U39_07915 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal E3U39_07920 PF10852 Protein of unknown function (DUF2651) E3U39_07930 PF07690 Major Facilitator Superfamily E3U39_07935 PF03009 Glycerophosphoryl diester phosphodiesterase family E3U39_07940 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 E3U39_07940 PF00535 Glycosyl transferase family 2 E3U39_07945 PF13520 Amino acid permease E3U39_07960 PF17334 Minor curli fiber component A E3U39_07965 PF16219 Domain of unknown function (DUF4879) E3U39_07970 PF00891 O-methyltransferase domain E3U39_07975 PF00550 Phosphopantetheine attachment site E3U39_07975 PF00501 AMP-binding enzyme E3U39_07975 PF00668 Condensation domain E3U39_07975 PF13193 AMP-binding enzyme C-terminal domain E3U39_07980 PF01593 Flavin containing amine oxidoreductase E3U39_07985 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_07985 PF00668 Condensation domain E3U39_07985 PF13193 AMP-binding enzyme C-terminal domain E3U39_07985 PF08659 KR domain E3U39_07985 PF00550 Phosphopantetheine attachment site E3U39_07985 PF14765 Polyketide synthase dehydratase E3U39_07985 PF00501 AMP-binding enzyme E3U39_07985 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_07985 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_07990 PF14765 Polyketide synthase dehydratase E3U39_07990 PF00550 Phosphopantetheine attachment site E3U39_07990 PF00668 Condensation domain E3U39_07990 PF08659 KR domain E3U39_07990 PF13193 AMP-binding enzyme C-terminal domain E3U39_07990 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_07990 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_07990 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_07990 PF00501 AMP-binding enzyme E3U39_07995 PF00698 Acyl transferase domain E3U39_08000 PF00975 Thioesterase domain E3U39_08000 PF00550 Phosphopantetheine attachment site E3U39_08000 PF00668 Condensation domain E3U39_08000 PF13193 AMP-binding enzyme C-terminal domain E3U39_08000 PF00501 AMP-binding enzyme E3U39_08005 PF13193 AMP-binding enzyme C-terminal domain E3U39_08005 PF00975 Thioesterase domain E3U39_08005 PF00550 Phosphopantetheine attachment site E3U39_08005 PF00501 AMP-binding enzyme E3U39_08005 PF00668 Condensation domain E3U39_08010 PF00975 Thioesterase domain E3U39_08030 PF00005 ABC transporter E3U39_08035 PF00072 Response regulator receiver domain E3U39_08035 PF00196 Bacterial regulatory proteins, luxR family E3U39_08040 PF07730 Histidine kinase E3U39_08045 PF13419 Haloacid dehalogenase-like hydrolase E3U39_08050 PF00324 Amino acid permease E3U39_08055 PF01047 MarR family E3U39_08060 PF03788 LrgA family E3U39_08065 PF04172 LrgB-like family E3U39_08070 PF00248 Aldo/keto reductase family E3U39_08075 PF16226 Domain of unknown function (DUF4885) E3U39_08090 PF00005 ABC transporter E3U39_08095 PF01380 SIS domain E3U39_08100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E3U39_08100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E3U39_08100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E3U39_08100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E3U39_08105 PF07949 YbbR-like protein E3U39_08110 PF02457 DisA bacterial checkpoint controller nucleotide-binding E3U39_08115 PF13490 Putative zinc-finger E3U39_08120 PF04542 Sigma-70 region 2 E3U39_08120 PF08281 Sigma-70, region 4 E3U39_08150 PF04463 Protein of unknown function (DUF523) E3U39_08160 PF01380 SIS domain E3U39_08165 PF02378 Phosphotransferase system, EIIC E3U39_08165 PF00367 phosphotransferase system, EIIB E3U39_08170 PF00144 Beta-lactamase E3U39_08175 PF01915 Glycosyl hydrolase family 3 C-terminal domain E3U39_08175 PF00933 Glycosyl hydrolase family 3 N terminal domain E3U39_08180 PF07075 Protein of unknown function (DUF1343) E3U39_08185 PF01497 Periplasmic binding protein E3U39_08185 PF12833 Helix-turn-helix domain E3U39_08190 PF01497 Periplasmic binding protein E3U39_08195 PF01032 FecCD transport family E3U39_08200 PF01032 FecCD transport family E3U39_08205 PF00756 Putative esterase E3U39_08210 PF01758 Sodium Bile acid symporter family E3U39_08215 PF01740 STAS domain E3U39_08215 PF00916 Sulfate permease family E3U39_08220 PF00107 Zinc-binding dehydrogenase E3U39_08220 PF08240 Alcohol dehydrogenase GroES-like domain E3U39_08230 PF00202 Aminotransferase class-III E3U39_08295 PF01522 Polysaccharide deacetylase E3U39_08300 PF14089 KinB-signalling pathway activation in sporulation E3U39_08305 PF17898 Spore germination GerD central core domain E3U39_08310 PF10609 NUBPL iron-transfer P-loop NTPase E3U39_08315 PF01520 N-acetylmuramoyl-L-alanine amidase E3U39_08320 PF10730 Protein of unknown function (DUF2521) E3U39_08325 PF05163 DinB family E3U39_08330 PF08241 Methyltransferase domain E3U39_08335 PF00380 Ribosomal protein S9/S16 E3U39_08340 PF00572 Ribosomal protein L13 E3U39_08345 PF01416 tRNA pseudouridine synthase E3U39_08350 PF02361 Cobalt transport protein E3U39_08355 PF00005 ABC transporter E3U39_08360 PF00005 ABC transporter E3U39_08365 PF01196 Ribosomal protein L17 E3U39_08370 PF01000 RNA polymerase Rpb3/RpoA insert domain E3U39_08370 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E3U39_08370 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E3U39_08375 PF00411 Ribosomal protein S11 E3U39_08380 PF00416 Ribosomal protein S13/S18 E3U39_08385 PF00444 Ribosomal protein L36 E3U39_08390 PF01176 Translation initiation factor 1A / IF-1 E3U39_08400 PF00557 Metallopeptidase family M24 E3U39_08405 PF05191 Adenylate kinase, active site lid E3U39_08410 PF00344 SecY translocase E3U39_08415 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E3U39_08420 PF00327 Ribosomal protein L30p/L7e E3U39_08425 PF00333 Ribosomal protein S5, N-terminal domain E3U39_08425 PF03719 Ribosomal protein S5, C-terminal domain E3U39_08430 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E3U39_08435 PF00347 Ribosomal protein L6 E3U39_08440 PF00410 Ribosomal protein S8 E3U39_08445 PF00253 Ribosomal protein S14p/S29e E3U39_08450 PF00281 Ribosomal protein L5 E3U39_08450 PF00673 ribosomal L5P family C-terminus E3U39_08455 PF00467 KOW motif E3U39_08455 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E3U39_08460 PF00238 Ribosomal protein L14p/L23e E3U39_08465 PF00366 Ribosomal protein S17 E3U39_08470 PF00831 Ribosomal L29 protein E3U39_08475 PF00252 Ribosomal protein L16p/L10e E3U39_08480 PF07650 KH domain E3U39_08480 PF00189 Ribosomal protein S3, C-terminal domain E3U39_08485 PF00237 Ribosomal protein L22p/L17e E3U39_08490 PF00203 Ribosomal protein S19 E3U39_08495 PF03947 Ribosomal Proteins L2, C-terminal domain E3U39_08495 PF00181 Ribosomal Proteins L2, RNA binding domain E3U39_08500 PF00276 Ribosomal protein L23 E3U39_08505 PF00573 Ribosomal protein L4/L1 family E3U39_08510 PF00297 Ribosomal protein L3 E3U39_08515 PF00338 Ribosomal protein S10p/S20e E3U39_08520 PF12146 Serine aminopeptidase, S33 E3U39_08525 PF00009 Elongation factor Tu GTP binding domain E3U39_08525 PF03143 Elongation factor Tu C-terminal domain E3U39_08525 PF03144 Elongation factor Tu domain 2 E3U39_08530 PF03144 Elongation factor Tu domain 2 E3U39_08530 PF00679 Elongation factor G C-terminus E3U39_08530 PF14492 Elongation Factor G, domain II E3U39_08530 PF00009 Elongation factor Tu GTP binding domain E3U39_08530 PF03764 Elongation factor G, domain IV E3U39_08535 PF00177 Ribosomal protein S7p/S5e E3U39_08540 PF00164 Ribosomal protein S12/S23 E3U39_08545 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family E3U39_08550 PF04998 RNA polymerase Rpb1, domain 5 E3U39_08550 PF05000 RNA polymerase Rpb1, domain 4 E3U39_08550 PF04983 RNA polymerase Rpb1, domain 3 E3U39_08550 PF04997 RNA polymerase Rpb1, domain 1 E3U39_08550 PF00623 RNA polymerase Rpb1, domain 2 E3U39_08555 PF04565 RNA polymerase Rpb2, domain 3 E3U39_08555 PF10385 RNA polymerase beta subunit external 1 domain E3U39_08555 PF04563 RNA polymerase beta subunit E3U39_08555 PF00562 RNA polymerase Rpb2, domain 6 E3U39_08555 PF04560 RNA polymerase Rpb2, domain 7 E3U39_08555 PF04561 RNA polymerase Rpb2, domain 2 E3U39_08560 PF05175 Methyltransferase small domain E3U39_08565 PF00542 Ribosomal protein L7/L12 C-terminal domain E3U39_08565 PF16320 Ribosomal protein L7/L12 dimerisation domain E3U39_08570 PF00466 Ribosomal protein L10 E3U39_08575 PF00687 Ribosomal protein L1p/L10e family E3U39_08580 PF00298 Ribosomal protein L11, RNA binding domain E3U39_08580 PF03946 Ribosomal protein L11, N-terminal domain E3U39_08585 PF02357 Transcription termination factor nusG E3U39_08585 PF00467 KOW motif E3U39_08590 PF00584 SecE/Sec61-gamma subunits of protein translocation complex E3U39_08595 PF00471 Ribosomal protein L33 E3U39_08600 PF08281 Sigma-70, region 4 E3U39_08600 PF04542 Sigma-70 region 2 E3U39_08605 PF05991 YacP-like NYN domain E3U39_08610 PF00588 SpoU rRNA Methylase family E3U39_08610 PF08032 RNA 2'-O ribose methyltransferase substrate binding E3U39_08615 PF00636 Ribonuclease III domain E3U39_08620 PF01406 tRNA synthetases class I (C) catalytic domain E3U39_08620 PF09190 DALR domain E3U39_08625 PF06426 Serine acetyltransferase, N-terminal E3U39_08625 PF00132 Bacterial transferase hexapeptide (six repeats) E3U39_08630 PF00749 tRNA synthetases class I (E and Q), catalytic domain E3U39_08635 PF02542 YgbB family E3U39_08640 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E3U39_08650 PF10635 DisA bacterial checkpoint controller linker region E3U39_08650 PF02457 DisA bacterial checkpoint controller nucleotide-binding E3U39_08655 PF18073 Rubredoxin metal binding domain E3U39_08660 PF07724 AAA domain (Cdc48 subfamily) E3U39_08660 PF17871 AAA lid domain E3U39_08660 PF02861 Clp amino terminal domain, pathogenicity island component E3U39_08660 PF10431 C-terminal, D2-small domain, of ClpB protein E3U39_08660 PF00004 ATPase family associated with various cellular activities (AAA) E3U39_08665 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain E3U39_08670 PF02151 UvrB/uvrC motif E3U39_08675 PF17727 CtsR C-terminal dimerization domain E3U39_08675 PF05848 CtsR N-terminal HTH domain E3U39_08755 PF01336 OB-fold nucleic acid binding domain E3U39_08755 PF00152 tRNA synthetases class II (D, K and N) E3U39_08760 PF01207 Dihydrouridine synthase (Dus) E3U39_08765 PF01381 Helix-turn-helix E3U39_08770 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E3U39_08775 PF02152 Dihydroneopterin aldolase E3U39_08780 PF00809 Pterin binding enzyme E3U39_08785 PF01063 Amino-transferase class IV E3U39_08790 PF00117 Glutamine amidotransferase class-I E3U39_08795 PF04715 Anthranilate synthase component I, N terminal region E3U39_08795 PF00425 chorismate binding enzyme E3U39_08800 PF00291 Pyridoxal-phosphate dependent enzyme E3U39_08805 PF13145 PPIC-type PPIASE domain E3U39_08810 PF01430 Hsp33 protein E3U39_08815 PF03309 Type III pantothenate kinase E3U39_08820 PF00004 ATPase family associated with various cellular activities (AAA) E3U39_08820 PF06480 FtsH Extracellular E3U39_08820 PF17862 AAA+ lid domain E3U39_08820 PF01434 Peptidase family M41 E3U39_08830 PF09179 TilS substrate binding domain E3U39_08830 PF11734 TilS substrate C-terminal domain E3U39_08830 PF01171 PP-loop family E3U39_08835 PF00069 Protein kinase domain E3U39_08840 PF00092 von Willebrand factor type A domain E3U39_08845 PF07228 Stage II sporulation protein E (SpoIIE) E3U39_08860 PF00575 S1 RNA binding domain E3U39_08865 PF04977 Septum formation initiator E3U39_08870 PF09578 Spore cortex protein YabQ (Spore_YabQ) E3U39_08875 PF07873 YabP family E3U39_08880 PF01479 S4 domain E3U39_08885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E3U39_08885 PF03819 MazG nucleotide pyrophosphohydrolase domain E3U39_08890 PF01943 Polysaccharide biosynthesis protein E3U39_08890 PF14667 Polysaccharide biosynthesis C-terminal domain E3U39_08895 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin E3U39_08895 PF15714 Stage V sporulation protein T C-terminal, transcription factor E3U39_08900 PF02559 CarD-like/TRCF domain E3U39_08900 PF00271 Helicase conserved C-terminal domain E3U39_08900 PF03461 TRCF domain E3U39_08900 PF17757 UvrB interaction domain E3U39_08900 PF00270 DEAD/DEAH box helicase E3U39_08905 PF10955 Protein of unknown function (DUF2757) E3U39_08910 PF01195 Peptidyl-tRNA hydrolase E3U39_08915 PF14693 Ribosomal protein TL5, C-terminal domain E3U39_08915 PF01386 Ribosomal L25p family E3U39_08920 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E3U39_08920 PF14572 Phosphoribosyl synthetase-associated domain E3U39_08925 PF00483 Nucleotidyl transferase E3U39_08925 PF00132 Bacterial transferase hexapeptide (six repeats) E3U39_08930 PF04026 SpoVG E3U39_08935 PF01042 Endoribonuclease L-PSP E3U39_08940 PF09182 Bacterial purine repressor, N-terminal E3U39_08940 PF00156 Phosphoribosyl transferase domain E3U39_08945 PF00288 GHMP kinases N terminal domain E3U39_08945 PF08544 GHMP kinases C terminal E3U39_08950 PF00269 Small, acid-soluble spore proteins, alpha/beta type E3U39_08955 PF06257 Biofilm formation stimulator VEG E3U39_08960 PF05582 YabG peptidase U57 E3U39_08965 PF00398 Ribosomal RNA adenine dimethylase E3U39_08970 PF13331 Domain of unknown function (DUF4093) E3U39_08970 PF13662 Toprim domain E3U39_08975 PF03990 G5-linked-Ubiquitin-like domain E3U39_08975 PF06725 3D domain E3U39_08975 PF07501 G5 domain E3U39_08980 PF01026 TatD related DNase E3U39_08985 PF01588 Putative tRNA binding domain E3U39_08985 PF08264 Anticodon-binding domain of tRNA E3U39_08985 PF09334 tRNA synthetases class I (M) E3U39_08990 PF18277 AbrB C-terminal domain E3U39_08990 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin E3U39_08995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E3U39_09000 PF01541 GIY-YIG catalytic domain E3U39_09005 PF05175 Methyltransferase small domain E3U39_09010 PF06156 Initiation control protein YabA E3U39_09015 PF04468 PSP1 C-terminal conserved region E3U39_09020 PF09115 DNA polymerase III, delta subunit, C terminal E3U39_09025 PF03885 Protein of unknown function (DUF327) E3U39_09030 PF06153 Cyclic-di-AMP receptor E3U39_09035 PF02223 Thymidylate kinase E3U39_09040 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain E3U39_09040 PF01276 Orn/Lys/Arg decarboxylase, major domain E3U39_09045 PF05816 Toxic anion resistance protein (TelA) E3U39_09050 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein E3U39_09055 PF10764 Inhibitor of sigma-G Gin E3U39_09075 PF07441 SigmaK-factor processing regulatory protein BofA E3U39_09080 PF10704 Protein of unknown function (DUF2508) E3U39_09085 PF02132 RecR protein E3U39_09085 PF13662 Toprim domain E3U39_09090 PF02575 YbaB/EbfC DNA-binding family E3U39_09095 PF12169 DNA polymerase III subunits gamma and tau domain III E3U39_09105 PF14437 MafB19-like deaminase E3U39_09110 PF00857 Isochorismatase family E3U39_09115 PF01476 LysM domain E3U39_09115 PF00704 Glycosyl hydrolases family 18 E3U39_09120 PF01712 Deoxynucleoside kinase E3U39_09125 PF01712 Deoxynucleoside kinase E3U39_09135 PF02595 Glycerate kinase family E3U39_09140 PF02403 Seryl-tRNA synthetase N-terminal domain E3U39_09140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E3U39_09145 PF01174 SNO glutamine amidotransferase family E3U39_09150 PF01680 SOR/SNZ family E3U39_09155 PF07943 Penicillin-binding protein 5, C-terminal domain E3U39_09155 PF00768 D-alanyl-D-alanine carboxypeptidase E3U39_09160 PF00478 IMP dehydrogenase / GMP reductase domain E3U39_09160 PF00571 CBS domain E3U39_09165 PF14175 YaaC-like Protein E3U39_09195 PF03989 DNA gyrase C-terminal domain, beta-propeller E3U39_09195 PF00521 DNA gyrase/topoisomerase IV, subunit A E3U39_09200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_09200 PF00204 DNA gyrase B E3U39_09200 PF00986 DNA gyrase B subunit, carboxyl terminus E3U39_09200 PF01751 Toprim domain E3U39_09205 PF04025 Domain of unknown function (DUF370) E3U39_09210 PF02463 RecF/RecN/SMC N terminal domain E3U39_09220 PF02768 DNA polymerase III beta subunit, C-terminal domain E3U39_09220 PF02767 DNA polymerase III beta subunit, central domain E3U39_09220 PF00712 DNA polymerase III beta subunit, N-terminal domain E3U39_09225 PF11638 DnaA N-terminal domain E3U39_09225 PF08299 Bacterial dnaA protein helix-turn-helix E3U39_09225 PF00308 Bacterial dnaA protein E3U39_09230 PF00468 Ribosomal protein L34 E3U39_09235 PF00825 Ribonuclease P E3U39_09240 PF02096 60Kd inner membrane protein E3U39_09245 PF14804 Jag N-terminus E3U39_09245 PF01424 R3H domain E3U39_09250 PF10396 GTP-binding protein TrmE N-terminus E3U39_09250 PF12631 MnmE helical domain E3U39_09250 PF01926 50S ribosome-binding GTPase E3U39_09255 PF13932 GidA associated domain E3U39_09255 PF01134 Glucose inhibited division protein A E3U39_09260 PF02527 rRNA small subunit methyltransferase G E3U39_09265 PF02195 ParB-like nuclease domain E3U39_09265 PF17762 HTH domain found in ParB protein E3U39_09270 PF13614 AAA domain E3U39_09275 PF17762 HTH domain found in ParB protein E3U39_09275 PF02195 ParB-like nuclease domain E3U39_09280 PF06866 Protein of unknown function (DUF1256) E3U39_09295 PF06107 Bacterial protein of unknown function (DUF951) E3U39_09300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3U39_09300 PF00384 Molybdopterin oxidoreductase E3U39_09300 PF01568 Molydopterin dinucleotide binding domain E3U39_09305 PF01926 50S ribosome-binding GTPase E3U39_09305 PF06071 Protein of unknown function (DUF933) E3U39_09310 PF01250 Ribosomal protein S6 E3U39_09315 PF00436 Single-strand binding protein family E3U39_09320 PF01084 Ribosomal protein S18 E3U39_09325 PF12833 Helix-turn-helix domain E3U39_09325 PF02805 Metal binding domain of Ada E3U39_09330 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E3U39_09330 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E3U39_09335 PF03372 Endonuclease/Exonuclease/phosphatase family E3U39_09340 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family E3U39_09340 PF00356 Bacterial regulatory proteins, lacI family E3U39_09345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E3U39_09350 PF00083 Sugar (and other) transporter E3U39_09355 PF02517 CPBP intramembrane metalloprotease E3U39_09360 PF03190 Protein of unknown function, DUF255 E3U39_09365 PF00892 EamA-like transporter family E3U39_09370 PF00392 Bacterial regulatory proteins, gntR family E3U39_09370 PF00155 Aminotransferase class I and II E3U39_09380 PF03466 LysR substrate binding domain E3U39_09380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3U39_09385 PF02627 Carboxymuconolactone decarboxylase family E3U39_09395 PF13673 Acetyltransferase (GNAT) domain E3U39_09400 PF01047 MarR family E3U39_09405 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E3U39_09405 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E3U39_09410 PF01047 MarR family E3U39_09415 PF00881 Nitroreductase family E3U39_09425 PF00892 EamA-like transporter family E3U39_09430 PF07690 Major Facilitator Superfamily E3U39_09435 PF05163 DinB family E3U39_09440 PF00392 Bacterial regulatory proteins, gntR family E3U39_09440 PF07729 FCD domain E3U39_09445 PF08244 Glycosyl hydrolases family 32 C terminal E3U39_09445 PF00251 Glycosyl hydrolases family 32 N-terminal domain E3U39_09450 PF02435 Levansucrase/Invertase E3U39_09455 PF00892 EamA-like transporter family E3U39_09460 PF01368 DHH family E3U39_09460 PF02833 DHHA2 domain E3U39_09465 PF01638 HxlR-like helix-turn-helix E3U39_09470 PF07875 Coat F domain E3U39_09480 PF09991 Predicted membrane protein (DUF2232) E3U39_09485 PF01368 DHH family E3U39_09485 PF02272 DHHA1 domain E3U39_09490 PF01281 Ribosomal protein L9, N-terminal domain E3U39_09490 PF03948 Ribosomal protein L9, C-terminal domain E3U39_09505 PF13439 Glycosyltransferase Family 4 E3U39_09505 PF00534 Glycosyl transferases group 1 E3U39_09510 PF02222 ATP-grasp domain E3U39_09520 PF00534 Glycosyl transferases group 1 E3U39_09520 PF13439 Glycosyltransferase Family 4 E3U39_09525 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase E3U39_09530 PF14174 YycC-like protein E3U39_09540 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) E3U39_09550 PF03796 DnaB-like helicase C terminal domain E3U39_09550 PF00772 DnaB-like helicase N terminal domain E3U39_09555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E3U39_09560 PF00709 Adenylosuccinate synthetase E3U39_09590 PF00486 Transcriptional regulatory protein, C terminal E3U39_09590 PF00072 Response regulator receiver domain E3U39_09595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_09595 PF00672 HAMP domain E3U39_09595 PF00512 His Kinase A (phospho-acceptor) domain E3U39_09595 PF13426 PAS domain E3U39_09600 PF07435 YycH protein E3U39_09605 PF09648 YycH protein E3U39_09610 PF00753 Metallo-beta-lactamase superfamily E3U39_09615 PF13180 PDZ domain E3U39_09620 PF00486 Transcriptional regulatory protein, C terminal E3U39_09620 PF00072 Response regulator receiver domain E3U39_09625 PF00512 His Kinase A (phospho-acceptor) domain E3U39_09625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_09625 PF00672 HAMP domain E3U39_09630 PF00899 ThiF family E3U39_09645 PF00005 ABC transporter E3U39_09645 PF12848 ABC transporter E3U39_09645 PF16326 ABC transporter C-terminal domain E3U39_09655 PF02954 Bacterial regulatory protein, Fis family E3U39_09655 PF00158 Sigma-54 interaction domain E3U39_09655 PF13426 PAS domain E3U39_09660 PF01022 Bacterial regulatory protein, arsR family E3U39_09665 PF13630 SdpI/YhfL protein family E3U39_09665 PF07853 Protein of unknown function (DUF1648) E3U39_09670 PF00202 Aminotransferase class-III E3U39_09675 PF00324 Amino acid permease E3U39_09680 PF00491 Arginase family E3U39_09685 PF18801 response regulator aspartate phosphatase H, N terminal E3U39_09690 PF00583 Acetyltransferase (GNAT) family E3U39_09695 PF00248 Aldo/keto reductase family E3U39_09720 PF14116 YyzF-like protein E3U39_09725 PF02590 Predicted SPOUT methyltransferase E3U39_09750 PF02625 XdhC and CoxI family E3U39_09750 PF13478 XdhC Rossmann domain E3U39_09755 PF12804 MobA-like NTP transferase domain E3U39_09760 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain E3U39_09760 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase E3U39_09760 PF01799 [2Fe-2S] binding domain E3U39_09760 PF00111 2Fe-2S iron-sulfur cluster binding domain E3U39_09770 PF01799 [2Fe-2S] binding domain E3U39_09770 PF00111 2Fe-2S iron-sulfur cluster binding domain E3U39_09775 PF06874 Firmicute fructose-1,6-bisphosphatase E3U39_09780 PF00324 Amino acid permease E3U39_09785 PF02661 Fic/DOC family E3U39_09785 PF13784 Fic/DOC family N-terminal E3U39_09790 PF13192 Thioredoxin domain E3U39_09790 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3U39_09795 PF00578 AhpC/TSA family E3U39_09805 PF06271 RDD family E3U39_09810 PF07690 Major Facilitator Superfamily E3U39_09825 PF01011 PQQ enzyme repeat E3U39_09825 PF13360 PQQ-like domain E3U39_09825 PF13570 PQQ-like domain E3U39_09830 PF00171 Aldehyde dehydrogenase family E3U39_09835 PF00440 Bacterial regulatory proteins, tetR family E3U39_09845 PF00487 Fatty acid desaturase E3U39_09850 PF07730 Histidine kinase E3U39_09855 PF00072 Response regulator receiver domain E3U39_09855 PF00196 Bacterial regulatory proteins, luxR family E3U39_09870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_09870 PF00183 Hsp90 protein E3U39_09875 PF00083 Sugar (and other) transporter E3U39_09880 PF00248 Aldo/keto reductase family E3U39_09885 PF00455 DeoR C terminal sensor domain E3U39_09885 PF08220 DeoR-like helix-turn-helix domain E3U39_09890 PF00171 Aldehyde dehydrogenase family E3U39_09895 PF04962 KduI/IolB family E3U39_09900 PF00294 pfkB family carbohydrate kinase E3U39_09905 PF00205 Thiamine pyrophosphate enzyme, central domain E3U39_09905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3U39_09905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3U39_09910 PF01261 Xylose isomerase-like TIM barrel E3U39_09915 PF07690 Major Facilitator Superfamily E3U39_09920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E3U39_09920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E3U39_09925 PF01261 Xylose isomerase-like TIM barrel E3U39_09930 PF01261 Xylose isomerase-like TIM barrel E3U39_09935 PF01116 Fructose-bisphosphate aldolase class-II E3U39_09950 PF00005 ABC transporter E3U39_09955 PF00072 Response regulator receiver domain E3U39_09955 PF00486 Transcriptional regulatory protein, C terminal E3U39_09960 PF00512 His Kinase A (phospho-acceptor) domain E3U39_09960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_09965 PF00486 Transcriptional regulatory protein, C terminal E3U39_09965 PF00072 Response regulator receiver domain E3U39_09970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_09975 PF00005 ABC transporter E3U39_09980 PF02687 FtsX-like permease family E3U39_09985 PF06486 Protein of unknown function (DUF1093) E3U39_09990 PF01497 Periplasmic binding protein E3U39_10010 PF11631 Protein of unknown function (DUF3255) E3U39_10025 PF04198 Putative sugar-binding domain E3U39_10030 PF01791 DeoC/LacD family aldolase E3U39_10035 PF07662 Na+ dependent nucleoside transporter C-terminus E3U39_10035 PF01773 Na+ dependent nucleoside transporter N-terminus E3U39_10040 PF02885 Glycosyl transferase family, helical bundle domain E3U39_10040 PF00591 Glycosyl transferase family, a/b domain E3U39_10040 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain E3U39_10045 PF00324 Amino acid permease E3U39_10050 PF00491 Arginase family E3U39_10055 PF01979 Amidohydrolase family E3U39_10060 PF17392 Urocanase C-terminal domain E3U39_10060 PF17391 Urocanase N-terminal domain E3U39_10060 PF01175 Urocanase Rossmann-like domain E3U39_10065 PF00221 Aromatic amino acid lyase E3U39_10070 PF09021 HutP E3U39_10075 PF16369 C-terminal lipocalin-like domain E3U39_10075 PF04616 Glycosyl hydrolases family 43 E3U39_10080 PF00293 NUDIX domain E3U39_10095 PF00582 Universal stress protein family E3U39_10100 PF00892 EamA-like transporter family E3U39_10105 PF00544 Pectate lyase E3U39_10110 PF05593 RHS Repeat E3U39_10170 PF14176 YxiJ-like protein E3U39_10180 PF10898 Protein of unknown function (DUF2716) E3U39_10200 PF00271 Helicase conserved C-terminal domain E3U39_10200 PF00270 DEAD/DEAH box helicase E3U39_10200 PF03880 DbpA RNA binding domain E3U39_10205 PF11700 Vacuole effluxer Atg22 like E3U39_10210 PF03123 CAT RNA binding domain E3U39_10210 PF00874 PRD domain E3U39_10215 PF00722 Glycosyl hydrolases family 16 E3U39_10220 PF03600 Citrate transporter E3U39_10225 PF06628 Catalase-related immune-responsive E3U39_10225 PF18011 C-terminal domain found in long catalases E3U39_10225 PF00199 Catalase E3U39_10245 PF01773 Na+ dependent nucleoside transporter N-terminus E3U39_10245 PF07662 Na+ dependent nucleoside transporter C-terminus E3U39_10250 PF08241 Methyltransferase domain E3U39_10255 PF01717 Cobalamin-independent synthase, Catalytic domain E3U39_10260 PF04525 LURP-one-related E3U39_10265 PF07687 Peptidase dimerisation domain E3U39_10265 PF01546 Peptidase family M20/M25/M40 E3U39_10270 PF16363 GDP-mannose 4,6 dehydratase E3U39_10275 PF11611 Domain of unknown function (DUF4352) E3U39_10280 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E3U39_10280 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E3U39_10285 PF13556 PucR C-terminal helix-turn-helix domain E3U39_10290 PF00005 ABC transporter E3U39_10290 PF17912 MalK OB fold domain E3U39_10290 PF03459 TOBE domain E3U39_10295 PF01522 Polysaccharide deacetylase E3U39_10300 PF03390 2-hydroxycarboxylate transporter family E3U39_10305 PF01654 Cytochrome bd terminal oxidase subunit I E3U39_10310 PF02322 Cytochrome bd terminal oxidase subunit II E3U39_10315 PF00664 ABC transporter transmembrane region E3U39_10315 PF00005 ABC transporter E3U39_10320 PF00664 ABC transporter transmembrane region E3U39_10320 PF00005 ABC transporter E3U39_10325 PF01256 Carbohydrate kinase E3U39_10330 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin E3U39_10335 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family E3U39_10340 PF00199 Catalase E3U39_10340 PF06628 Catalase-related immune-responsive E3U39_10345 PF02156 Glycosyl hydrolase family 26 E3U39_10350 PF01238 Phosphomannose isomerase type I E3U39_10355 PF00480 ROK family E3U39_10360 PF00232 Glycosyl hydrolase family 1 E3U39_10365 PF02378 Phosphotransferase system, EIIC E3U39_10370 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit E3U39_10375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3U39_10380 PF02040 Arsenical pump membrane protein E3U39_10385 PF01022 Bacterial regulatory protein, arsR family E3U39_10395 PF01032 FecCD transport family E3U39_10400 PF01032 FecCD transport family E3U39_10410 PF02245 Methylpurine-DNA glycosylase (MPG) E3U39_10415 PF00874 PRD domain E3U39_10415 PF05043 Mga helix-turn-helix domain E3U39_10415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3U39_10415 PF08279 HTH domain E3U39_10420 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3U39_10425 PF02378 Phosphotransferase system, EIIC E3U39_10430 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit E3U39_10435 PF11975 Family 4 glycosyl hydrolase C-terminal domain E3U39_10435 PF02056 Family 4 glycosyl hydrolase E3U39_10440 PF01063 Amino-transferase class IV E3U39_10445 PF04914 DltD protein E3U39_10450 PF00550 Phosphopantetheine attachment site E3U39_10455 PF03062 MBOAT, membrane-bound O-acyltransferase family E3U39_10460 PF00501 AMP-binding enzyme E3U39_10460 PF13193 AMP-binding enzyme C-terminal domain E3U39_10465 PF12459 D-Ala-teichoic acid biosynthesis protein E3U39_10480 PF01040 UbiA prenyltransferase family E3U39_10495 PF01501 Glycosyl transferase family 8 E3U39_10500 PF00082 Subtilase family E3U39_10505 PF02378 Phosphotransferase system, EIIC E3U39_10510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E3U39_10515 PF10672 S-adenosylmethionine-dependent methyltransferase E3U39_10515 PF17785 PUA-like domain E3U39_10520 PF10026 Predicted Zn-dependent protease (DUF2268) E3U39_10525 PF07739 TipAS antibiotic-recognition domain E3U39_10525 PF13411 MerR HTH family regulatory protein E3U39_10530 PF09962 Uncharacterized conserved protein (DUF2196) E3U39_10535 PF04172 LrgB-like family E3U39_10540 PF03788 LrgA family E3U39_10545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3U39_10545 PF03466 LysR substrate binding domain E3U39_10550 PF02110 Hydroxyethylthiazole kinase family E3U39_10555 PF02581 Thiamine monophosphate synthase E3U39_10560 PF09375 Imelysin E3U39_10565 PF10518 TAT (twin-arginine translocation) pathway signal sequence E3U39_10565 PF04261 Dyp-type peroxidase family E3U39_10570 PF01323 DSBA-like thioredoxin domain E3U39_10585 PF08671 Anti-repressor SinI E3U39_10590 PF00440 Bacterial regulatory proteins, tetR family E3U39_10595 PF04138 GtrA-like protein E3U39_10600 PF10509 Galactokinase galactose-binding signature E3U39_10600 PF08544 GHMP kinases C terminal E3U39_10600 PF00288 GHMP kinases N terminal domain E3U39_10605 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain E3U39_10605 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain E3U39_10610 PF04226 Transglycosylase associated protein E3U39_10615 PF00116 Cytochrome C oxidase subunit II, periplasmic domain E3U39_10615 PF02790 Cytochrome C oxidase subunit II, transmembrane domain E3U39_10620 PF00115 Cytochrome C and Quinol oxidase polypeptide I E3U39_10625 PF00510 Cytochrome c oxidase subunit III E3U39_10630 PF03626 Prokaryotic Cytochrome C oxidase subunit IV E3U39_10635 PF17368 Spore morphogenesis and germination YwcE E3U39_10640 PF00583 Acetyltransferase (GNAT) family E3U39_10645 PF01098 Cell cycle protein E3U39_10650 PF00881 Nitroreductase family E3U39_10655 PF00296 Luciferase-like monooxygenase E3U39_10660 PF02225 PA domain E3U39_10660 PF13860 FlgD Ig-like domain E3U39_10660 PF00082 Subtilase family E3U39_10660 PF05922 Peptidase inhibitor I9 E3U39_10670 PF00874 PRD domain E3U39_10670 PF03123 CAT RNA binding domain E3U39_10675 PF00367 phosphotransferase system, EIIB E3U39_10675 PF02378 Phosphotransferase system, EIIC E3U39_10680 PF08244 Glycosyl hydrolases family 32 C terminal E3U39_10680 PF00251 Glycosyl hydrolases family 32 N-terminal domain E3U39_10690 PF08543 Phosphomethylpyrimidine kinase E3U39_10695 PF00535 Glycosyl transferase family 2 E3U39_10700 PF03167 Uracil DNA glycosylase superfamily E3U39_10705 PF17261 Family of unknown function (DUF5327) E3U39_10710 PF00860 Permease family E3U39_10715 PF04241 Protein of unknown function (DUF423) E3U39_10720 PF09671 Spore coat protein (Spore_GerQ) E3U39_10725 PF00535 Glycosyl transferase family 2 E3U39_10730 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase E3U39_10735 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E3U39_10740 PF00583 Acetyltransferase (GNAT) family E3U39_10745 PF03102 NeuB family E3U39_10745 PF08666 SAF domain E3U39_10750 PF02348 Cytidylyltransferase E3U39_10755 PF04101 Glycosyltransferase family 28 C-terminal domain E3U39_10760 PF00483 Nucleotidyl transferase E3U39_10765 PF16363 GDP-mannose 4,6 dehydratase E3U39_10770 PF04321 RmlD substrate binding domain E3U39_10775 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase E3U39_10780 PF17735 Biofilm surface layer A E3U39_10785 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E3U39_10785 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E3U39_10790 PF00171 Aldehyde dehydrogenase family E3U39_10795 PF01546 Peptidase family M20/M25/M40 E3U39_10800 PF00324 Amino acid permease E3U39_10805 PF07690 Major Facilitator Superfamily E3U39_10810 PF07690 Major Facilitator Superfamily E3U39_10820 PF07883 Cupin domain E3U39_10835 PF07690 Major Facilitator Superfamily E3U39_10840 PF00155 Aminotransferase class I and II E3U39_10855 PF01515 Phosphate acetyl/butaryl transferase E3U39_10860 PF03601 Conserved hypothetical protein 698 E3U39_10865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3U39_10865 PF03466 LysR substrate binding domain E3U39_10870 PF03099 Biotin/lipoate A/B protein ligase family E3U39_10895 PF12679 ABC-2 family transporter protein E3U39_10900 PF00005 ABC transporter E3U39_10910 PF03551 Transcriptional regulator PadR-like family E3U39_10920 PF07293 Protein of unknown function (DUF1450) E3U39_10925 PF01966 HD domain E3U39_10935 PF13520 Amino acid permease E3U39_10945 PF01047 MarR family E3U39_10950 PF01361 Tautomerase enzyme E3U39_10955 PF02163 Peptidase family M50 E3U39_10960 PF08741 YwhD family E3U39_10970 PF00912 Transglycosylase E3U39_10970 PF00905 Penicillin binding protein transpeptidase domain E3U39_10975 PF17284 Spermidine synthase tetramerisation domain E3U39_10980 PF00491 Arginase family E3U39_11020 PF11131 Rap-phr extracellular signalling E3U39_11025 PF18801 response regulator aspartate phosphatase H, N terminal E3U39_11030 PF09148 Domain of unknown function (DUF1934) E3U39_11035 PF00750 tRNA synthetases class I (R) E3U39_11035 PF03485 Arginyl tRNA synthetase N terminal domain E3U39_11035 PF05746 DALR anticodon binding domain E3U39_11040 PF07690 Major Facilitator Superfamily E3U39_11045 PF00027 Cyclic nucleotide-binding domain E3U39_11045 PF00325 Bacterial regulatory proteins, crp family E3U39_11050 PF14256 YwiC-like protein E3U39_11060 PF14710 Respiratory nitrate reductase alpha N-terminal E3U39_11060 PF00384 Molybdopterin oxidoreductase E3U39_11060 PF01568 Molydopterin dinucleotide binding domain E3U39_11065 PF14711 Respiratory nitrate reductase beta C-terminal E3U39_11065 PF13247 4Fe-4S dicluster domain E3U39_11070 PF02613 Nitrate reductase delta subunit E3U39_11075 PF02665 Nitrate reductase gamma subunit E3U39_11085 PF13396 Phospholipase_D-nuclease N-terminal E3U39_11085 PF13091 PLD-like domain E3U39_11090 PF00664 ABC transporter transmembrane region E3U39_11090 PF00005 ABC transporter E3U39_11100 PF03851 UV-endonuclease UvdE E3U39_11105 PF13091 PLD-like domain E3U39_11110 PF02754 Cysteine-rich domain E3U39_11110 PF13183 4Fe-4S dicluster domain E3U39_11115 PF05066 HB1, ASXL, restriction endonuclease HTH domain E3U39_11120 PF00117 Glutamine amidotransferase class-I E3U39_11120 PF06418 CTP synthase N-terminus E3U39_11125 PF10740 Domain of unknown function (DUF2529) E3U39_11130 PF00072 Response regulator receiver domain E3U39_11135 PF01116 Fructose-bisphosphate aldolase class-II E3U39_11140 PF00923 Transaldolase/Fructose-6-phosphate aldolase E3U39_11145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E3U39_11150 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded E3U39_11155 PF07497 Rho termination factor, RNA-binding domain E3U39_11155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3U39_11155 PF07498 Rho termination factor, N-terminal domain E3U39_11160 PF01197 Ribosomal protein L31 E3U39_11165 PF00265 Thymidine kinase E3U39_11170 PF03949 Malic enzyme, NAD binding domain E3U39_11170 PF00390 Malic enzyme, N-terminal domain E3U39_11175 PF03547 Membrane transport protein E3U39_11180 PF13411 MerR HTH family regulatory protein E3U39_11185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E3U39_11190 PF00472 RF-1 domain E3U39_11190 PF03462 PCRF domain E3U39_11195 PF17827 PrmC N-terminal domain E3U39_11195 PF05175 Methyltransferase small domain E3U39_11200 PF17247 Family of unknown function (DUF5316) E3U39_11205 PF17094 Uncharacterised protein family (UPF0715) E3U39_11210 PF09551 Stage II sporulation protein R (spore_II_R) E3U39_11220 PF03481 Putative GTP-binding controlling metal-binding E3U39_11220 PF01300 Telomere recombination E3U39_11225 PF02659 Putative manganese efflux pump E3U39_11230 PF01451 Low molecular weight phosphotyrosine protein phosphatase E3U39_11235 PF02502 Ribose/Galactose Isomerase E3U39_11240 PF04260 Protein of unknown function (DUF436) E3U39_11245 PF00464 Serine hydroxymethyltransferase E3U39_11255 PF03899 ATP synthase I chain E3U39_11260 PF00119 ATP synthase A chain E3U39_11265 PF00137 ATP synthase subunit C E3U39_11270 PF00430 ATP synthase B/B' CF(0) E3U39_11275 PF00213 ATP synthase delta (OSCP) subunit E3U39_11280 PF00306 ATP synthase alpha/beta chain, C terminal domain E3U39_11280 PF02874 ATP synthase alpha/beta family, beta-barrel domain E3U39_11280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3U39_11285 PF00231 ATP synthase E3U39_11290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E3U39_11290 PF02874 ATP synthase alpha/beta family, beta-barrel domain E3U39_11295 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain E3U39_11295 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain E3U39_11305 PF06612 Protein of unknown function (DUF1146) E3U39_11310 PF08680 TATA-box binding E3U39_11315 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E3U39_11320 PF08486 Stage II sporulation protein E3U39_11330 PF00092 von Willebrand factor type A domain E3U39_11335 PF00092 von Willebrand factor type A domain E3U39_11340 PF02634 FdhD/NarQ family E3U39_11345 PF04055 Radical SAM superfamily E3U39_11345 PF06463 Molybdenum Cofactor Synthesis C E3U39_11350 PF17874 MalT-like TPR region E3U39_11350 PF18801 response regulator aspartate phosphatase H, N terminal E3U39_11360 PF05532 CsbD-like E3U39_11365 PF00547 Urease, gamma subunit E3U39_11370 PF00699 Urease beta subunit E3U39_11375 PF01979 Amidohydrolase family E3U39_11375 PF00449 Urease alpha-subunit, N-terminal domain E3U39_11380 PF02082 Transcriptional regulator E3U39_11390 PF00457 Glycosyl hydrolases family 11 E3U39_11395 PF17319 Family of unknown function (DUF5362) E3U39_11400 PF13396 Phospholipase_D-nuclease N-terminal E3U39_11400 PF13091 PLD-like domain E3U39_11405 PF17370 Family of unknown function (DUF5392) E3U39_11410 PF17319 Family of unknown function (DUF5362) E3U39_11415 PF00583 Acetyltransferase (GNAT) family E3U39_11420 PF01551 Peptidase family M23 E3U39_11425 PF04892 VanZ like family E3U39_11430 PF01569 PAP2 superfamily E3U39_11435 PF01098 Cell cycle protein E3U39_11440 PF00543 Nitrogen regulatory protein P-II E3U39_11445 PF00909 Ammonium Transporter Family E3U39_11450 PF00857 Isochorismatase family E3U39_11455 PF07690 Major Facilitator Superfamily E3U39_11460 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin E3U39_11465 PF07690 Major Facilitator Superfamily E3U39_11470 PF01047 MarR family E3U39_11475 PF12116 Stage III sporulation protein D E3U39_11485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E3U39_11485 PF00460 Flagella basal body rod protein E3U39_11490 PF00460 Flagella basal body rod protein E3U39_11490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E3U39_11495 PF18801 response regulator aspartate phosphatase H, N terminal E3U39_11500 PF07977 FabA-like domain E3U39_11505 PF01741 Large-conductance mechanosensitive channel, MscL E3U39_11510 PF14183 YwpF-like protein E3U39_11520 PF00436 Single-strand binding protein family E3U39_11525 PF00455 DeoR C terminal sensor domain E3U39_11525 PF08220 DeoR-like helix-turn-helix domain E3U39_11535 PF00176 SNF2 family N-terminal domain E3U39_11535 PF00271 Helicase conserved C-terminal domain E3U39_11535 PF12419 SNF2 Helicase protein E3U39_11540 PF04434 SWIM zinc finger E3U39_11555 PF13807 G-rich domain on putative tyrosine kinase E3U39_11555 PF02706 Chain length determinant protein E3U39_11560 PF13614 AAA domain E3U39_11570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E3U39_11570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E3U39_11570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E3U39_11575 PF09234 Domain of unknown function (DUF1963) E3U39_11580 PF16888 Domain of unknown function (DUF5082) E3U39_11590 PF04740 LXG domain of WXG superfamily E3U39_11590 PF14431 YwqJ-like deaminase E3U39_11590 PF14449 Pre-toxin TG E3U39_11640 PF04493 Endonuclease V E3U39_11645 PF02417 Chromate transporter E3U39_11650 PF02417 Chromate transporter E3U39_11655 PF01037 Lrp/AsnC ligand binding domain E3U39_11655 PF13404 AsnC-type helix-turn-helix domain E3U39_11670 PF01613 Flavin reductase like domain E3U39_11680 PF08757 CotH kinase protein E3U39_11695 PF02040 Arsenical pump membrane protein E3U39_11700 PF03466 LysR substrate binding domain E3U39_11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3U39_11705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3U39_11705 PF00205 Thiamine pyrophosphate enzyme, central domain E3U39_11705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3U39_11710 PF03306 Alpha-acetolactate decarboxylase E3U39_11715 PF02525 Flavodoxin-like fold E3U39_11720 PF08239 Bacterial SH3 domain E3U39_11725 PF13407 Periplasmic binding protein domain E3U39_11730 PF02653 Branched-chain amino acid transport system / permease component E3U39_11735 PF00005 ABC transporter E3U39_11740 PF05025 RbsD / FucU transport protein family E3U39_11745 PF00294 pfkB family carbohydrate kinase E3U39_11750 PF00356 Bacterial regulatory proteins, lacI family E3U39_11760 PF03845 Spore germination protein E3U39_11765 PF03323 Bacillus/Clostridium GerA spore germination protein E3U39_11775 PF08245 Mur ligase middle domain E3U39_11780 PF14102 Capsule biosynthesis CapC E3U39_11785 PF09587 Bacterial capsule synthesis protein PGA_cap E3U39_11790 PF00877 NlpC/P60 family E3U39_11795 PF04791 LMBR1-like membrane protein E3U39_11805 PF03816 Cell envelope-related transcriptional attenuator domain E3U39_11810 PF00083 Sugar (and other) transporter E3U39_11820 PF05504 Spore germination B3/ GerAC like, C-terminal E3U39_11825 PF03845 Spore germination protein E3U39_11830 PF03323 Bacillus/Clostridium GerA spore germination protein E3U39_11835 PF01238 Phosphomannose isomerase type I E3U39_11840 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E3U39_11840 PF08239 Bacterial SH3 domain E3U39_11840 PF05036 Sporulation related domain E3U39_11845 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase E3U39_11850 PF03808 Glycosyl transferase WecB/TagA/CpsF family E3U39_11855 PF01467 Cytidylyltransferase-like E3U39_11865 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase E3U39_11870 PF01061 ABC-2 type transporter E3U39_11875 PF00005 ABC transporter E3U39_11880 PF00483 Nucleotidyl transferase E3U39_11885 PF02350 UDP-N-acetylglucosamine 2-epimerase E3U39_11890 PF03816 Cell envelope-related transcriptional attenuator domain E3U39_11900 PF04122 Putative cell wall binding repeat 2 E3U39_11900 PF08486 Stage II sporulation protein E3U39_11905 PF04122 Putative cell wall binding repeat 2 E3U39_11905 PF01520 N-acetylmuramoyl-L-alanine amidase E3U39_11910 PF02397 Bacterial sugar transferase E3U39_11915 PF01943 Polysaccharide biosynthesis protein E3U39_11915 PF14667 Polysaccharide biosynthesis C-terminal domain E3U39_11920 PF00534 Glycosyl transferases group 1 E3U39_11920 PF13439 Glycosyltransferase Family 4 E3U39_11930 PF04932 O-Antigen ligase E3U39_11935 PF02706 Chain length determinant protein E3U39_11940 PF00535 Glycosyl transferase family 2 E3U39_11950 PF00953 Glycosyl transferase family 4 E3U39_11955 PF03816 Cell envelope-related transcriptional attenuator domain E3U39_11960 PF01205 Uncharacterized protein family UPF0029 E3U39_11960 PF09186 Domain of unknown function (DUF1949) E3U39_11965 PF07730 Histidine kinase E3U39_11965 PF05384 Sensor protein DegS E3U39_11965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_11970 PF00072 Response regulator receiver domain E3U39_11970 PF00196 Bacterial regulatory proteins, luxR family E3U39_11975 PF02645 Uncharacterised protein, DegV family COG1307 E3U39_11980 PF04851 Type III restriction enzyme, res subunit E3U39_11980 PF00271 Helicase conserved C-terminal domain E3U39_11985 PF10719 Late competence development protein ComFB E3U39_12000 PF04316 Anti-sigma-28 factor, FlgM E3U39_12005 PF05130 FlgN protein E3U39_12010 PF00460 Flagella basal body rod protein E3U39_12010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E3U39_12015 PF00700 Bacterial flagellin C-terminal helical region E3U39_12015 PF00669 Bacterial flagellin N-terminal helical region E3U39_12025 PF02623 FliW protein E3U39_12030 PF02599 Global regulator protein family E3U39_12035 PF00700 Bacterial flagellin C-terminal helical region E3U39_12035 PF00669 Bacterial flagellin N-terminal helical region E3U39_12040 PF02465 Flagellar hook-associated protein 2 N-terminus E3U39_12040 PF07196 Flagellin hook IN motif E3U39_12040 PF07195 Flagellar hook-associated protein 2 C-terminus E3U39_12045 PF02561 Flagellar protein FliS E3U39_12060 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus E3U39_12060 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein E3U39_12065 PF07517 SecA DEAD-like domain E3U39_12065 PF01043 SecA preprotein cross-linking domain E3U39_12065 PF07516 SecA Wing and Scaffold domain E3U39_12065 PF02810 SEC-C motif E3U39_12075 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E3U39_12075 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E3U39_12080 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E3U39_12085 PF00005 ABC transporter E3U39_12090 PF18075 FtsX extracellular domain E3U39_12090 PF02687 FtsX-like permease family E3U39_12095 PF13229 Right handed beta helix region E3U39_12100 PF17820 PDZ domain E3U39_12100 PF03572 Peptidase family S41 E3U39_12100 PF01471 Putative peptidoglycan binding domain E3U39_12105 PF17423 Swarming motility protein E3U39_12110 PF17820 PDZ domain E3U39_12125 PF00668 Condensation domain E3U39_12125 PF00550 Phosphopantetheine attachment site E3U39_12125 PF13193 AMP-binding enzyme C-terminal domain E3U39_12125 PF00501 AMP-binding enzyme E3U39_12130 PF13193 AMP-binding enzyme C-terminal domain E3U39_12130 PF00668 Condensation domain E3U39_12130 PF00550 Phosphopantetheine attachment site E3U39_12130 PF00975 Thioesterase domain E3U39_12130 PF00501 AMP-binding enzyme E3U39_12135 PF00005 ABC transporter E3U39_12135 PF00664 ABC transporter transmembrane region E3U39_12150 PF00975 Thioesterase domain E3U39_12155 PF07690 Major Facilitator Superfamily E3U39_12160 PF00440 Bacterial regulatory proteins, tetR family E3U39_12165 PF00391 PEP-utilising enzyme, mobile domain E3U39_12165 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E3U39_12170 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) E3U39_12175 PF04851 Type III restriction enzyme, res subunit E3U39_12175 PF12344 Ultra-violet resistance protein B E3U39_12175 PF17757 UvrB interaction domain E3U39_12175 PF00271 Helicase conserved C-terminal domain E3U39_12175 PF02151 UvrB/uvrC motif E3U39_12180 PF17760 UvrA interaction domain E3U39_12180 PF00005 ABC transporter E3U39_12180 PF17755 UvrA DNA-binding domain E3U39_12195 PF13349 Putative adhesin E3U39_12200 PF04024 PspC domain E3U39_12205 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV E3U39_12210 PF00149 Calcineurin-like phosphoesterase E3U39_12215 PF00440 Bacterial regulatory proteins, tetR family E3U39_12225 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase E3U39_12230 PF01979 Amidohydrolase family E3U39_12235 PF07475 HPr Serine kinase C-terminal domain E3U39_12235 PF02603 HPr Serine kinase N terminus E3U39_12240 PF01790 Prolipoprotein diacylglyceryl transferase E3U39_12245 PF13419 Haloacid dehalogenase-like hydrolase E3U39_12250 PF14602 Hexapeptide repeat of succinyl-transferase E3U39_12255 PF13529 Peptidase_C39 like family E3U39_12260 PF13393 Histidyl-tRNA synthetase E3U39_12265 PF01634 ATP phosphoribosyltransferase E3U39_12270 PF00815 Histidinol dehydrogenase E3U39_12275 PF00475 Imidazoleglycerol-phosphate dehydratase E3U39_12280 PF00117 Glutamine amidotransferase class-I E3U39_12285 PF00977 Histidine biosynthesis protein E3U39_12290 PF00977 Histidine biosynthesis protein E3U39_12295 PF01502 Phosphoribosyl-AMP cyclohydrolase E3U39_12295 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase E3U39_12300 PF00664 ABC transporter transmembrane region E3U39_12300 PF00005 ABC transporter E3U39_12310 PF00072 Response regulator receiver domain E3U39_12310 PF00486 Transcriptional regulatory protein, C terminal E3U39_12315 PF00672 HAMP domain E3U39_12315 PF00512 His Kinase A (phospho-acceptor) domain E3U39_12315 PF18698 Histidine kinase sensor domain E3U39_12315 PF00989 PAS fold E3U39_12315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_12325 PF00877 NlpC/P60 family E3U39_12330 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3U39_12335 PF00293 NUDIX domain E3U39_12340 PF03668 P-loop ATPase protein family E3U39_12345 PF01933 Uncharacterised protein family UPF0052 E3U39_12350 PF02650 WhiA C-terminal HTH domain E3U39_12350 PF10298 WhiA N-terminal LAGLIDADG-like domain E3U39_12350 PF14527 WhiA LAGLIDADG-like domain E3U39_12355 PF00381 PTS HPr component phosphorylation site E3U39_12360 PF00797 N-acetyltransferase E3U39_12365 PF00545 ribonuclease E3U39_12370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E3U39_12370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E3U39_12380 PF00484 Carbonic anhydrase E3U39_12385 PF00916 Sulfate permease family E3U39_12385 PF01740 STAS domain E3U39_12390 PF03819 MazG nucleotide pyrophosphohydrolase domain E3U39_12395 PF03641 Possible lysine decarboxylase E3U39_12400 PF00083 Sugar (and other) transporter E3U39_12405 PF04303 PrpF protein E3U39_12410 PF03466 LysR substrate binding domain E3U39_12410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3U39_12415 PF00574 Clp protease E3U39_12420 PF00356 Bacterial regulatory proteins, lacI family E3U39_12425 PF01306 LacY proton/sugar symporter E3U39_12430 PF08244 Glycosyl hydrolases family 32 C terminal E3U39_12430 PF00251 Glycosyl hydrolases family 32 N-terminal domain E3U39_12465 PF05870 Phenolic acid decarboxylase (PAD) E3U39_12470 PF00583 Acetyltransferase (GNAT) family E3U39_12480 PF01872 RibD C-terminal domain E3U39_12485 PF00135 Carboxylesterase family E3U39_12490 PF01381 Helix-turn-helix E3U39_12490 PF08671 Anti-repressor SinI E3U39_12495 PF02706 Chain length determinant protein E3U39_12500 PF13614 AAA domain E3U39_12505 PF02719 Polysaccharide biosynthesis protein E3U39_12510 PF13439 Glycosyltransferase Family 4 E3U39_12510 PF00534 Glycosyl transferases group 1 E3U39_12515 PF00535 Glycosyl transferase family 2 E3U39_12520 PF00534 Glycosyl transferases group 1 E3U39_12520 PF13439 Glycosyltransferase Family 4 E3U39_12530 PF00535 Glycosyl transferase family 2 E3U39_12535 PF04230 Polysaccharide pyruvyl transferase E3U39_12540 PF00535 Glycosyl transferase family 2 E3U39_12545 PF01943 Polysaccharide biosynthesis protein E3U39_12545 PF14667 Polysaccharide biosynthesis C-terminal domain E3U39_12550 PF02397 Bacterial sugar transferase E3U39_12555 PF17836 PglD N-terminal domain E3U39_12555 PF00132 Bacterial transferase hexapeptide (six repeats) E3U39_12560 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E3U39_12565 PF04230 Polysaccharide pyruvyl transferase E3U39_12570 PF09628 YvfG protein E3U39_12575 PF00309 Sigma-54 factor, Activator interacting domain (AID) E3U39_12575 PF04552 Sigma-54, DNA binding domain E3U39_12575 PF04963 Sigma-54 factor, core binding domain E3U39_12580 PF02652 L-lactate permease E3U39_12585 PF07729 FCD domain E3U39_12585 PF00392 Bacterial regulatory proteins, gntR family E3U39_12590 PF00155 Aminotransferase class I and II E3U39_12595 PF02754 Cysteine-rich domain E3U39_12600 PF02589 LUD domain E3U39_12600 PF13183 4Fe-4S dicluster domain E3U39_12600 PF11870 Domain of unknown function (DUF3390) E3U39_12605 PF02589 LUD domain E3U39_12610 PF02447 GntP family permease E3U39_12615 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3U39_12615 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3U39_12620 PF01418 Helix-turn-helix domain, rpiR family E3U39_12620 PF01380 SIS domain E3U39_12635 PF00356 Bacterial regulatory proteins, lacI family E3U39_12645 PF00324 Amino acid permease E3U39_12650 PF00892 EamA-like transporter family E3U39_12655 PF03466 LysR substrate binding domain E3U39_12655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3U39_12660 PF00296 Luciferase-like monooxygenase E3U39_12670 PF00392 Bacterial regulatory proteins, gntR family E3U39_12675 PF00083 Sugar (and other) transporter E3U39_12680 PF04198 Putative sugar-binding domain E3U39_12685 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E3U39_12685 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E3U39_12695 PF00162 Phosphoglycerate kinase E3U39_12700 PF00121 Triosephosphate isomerase E3U39_12705 PF01676 Metalloenzyme superfamily E3U39_12705 PF06415 BPG-independent PGAM N-terminus (iPGM_N) E3U39_12710 PF00113 Enolase, C-terminal TIM barrel domain E3U39_12710 PF03952 Enolase, N-terminal domain E3U39_12715 PF04389 Peptidase family M28 E3U39_12715 PF02225 PA domain E3U39_12720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain E3U39_12720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain E3U39_12720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain E3U39_12725 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E3U39_12730 PF01370 NAD dependent epimerase/dehydratase family E3U39_12735 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E3U39_12750 PF02585 GlcNAc-PI de-N-acetylase E3U39_12765 PF00583 Acetyltransferase (GNAT) family E3U39_12770 PF13240 zinc-ribbon domain E3U39_12785 PF01914 MarC family integral membrane protein E3U39_12790 PF12802 MarR family E3U39_12795 PF00571 CBS domain E3U39_12795 PF00005 ABC transporter E3U39_12800 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_12805 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E3U39_12810 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_12815 PF12802 MarR family E3U39_12820 PF00571 CBS domain E3U39_12820 PF00005 ABC transporter E3U39_12825 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_12830 PF04069 Substrate binding domain of ABC-type glycine betaine transport system E3U39_12835 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_12840 PF14028 Lantibiotic biosynthesis dehydratase C-term E3U39_12840 PF04738 Lantibiotic dehydratase, N terminus E3U39_12845 PF00005 ABC transporter E3U39_12850 PF05147 Lanthionine synthetase C-like protein E3U39_12855 PF02052 Gallidermin E3U39_12865 PF02052 Gallidermin E3U39_12875 PF00005 ABC transporter E3U39_12890 PF00486 Transcriptional regulatory protein, C terminal E3U39_12890 PF00072 Response regulator receiver domain E3U39_12895 PF00512 His Kinase A (phospho-acceptor) domain E3U39_12895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_12900 PF01638 HxlR-like helix-turn-helix E3U39_12915 PF01381 Helix-turn-helix E3U39_12920 PF03840 Preprotein translocase SecG subunit E3U39_12925 PF12146 Serine aminopeptidase, S33 E3U39_12930 PF00773 RNB domain E3U39_12930 PF08206 Ribonuclease B OB domain E3U39_12930 PF17876 Cold shock domain E3U39_12930 PF00575 S1 RNA binding domain E3U39_12935 PF01668 SmpB protein E3U39_12950 PF00106 short chain dehydrogenase E3U39_12955 PF03466 LysR substrate binding domain E3U39_12955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3U39_12960 PF00583 Acetyltransferase (GNAT) family E3U39_12965 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3U39_12970 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3U39_12975 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_12980 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_12985 PF00005 ABC transporter E3U39_12990 PF00296 Luciferase-like monooxygenase E3U39_12995 PF00462 Glutaredoxin E3U39_13000 PF00296 Luciferase-like monooxygenase E3U39_13015 PF07690 Major Facilitator Superfamily E3U39_13030 PF02525 Flavodoxin-like fold E3U39_13035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E3U39_13035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E3U39_13040 PF02583 Metal-sensitive transcriptional repressor E3U39_13045 PF00403 Heavy-metal-associated domain E3U39_13050 PF00403 Heavy-metal-associated domain E3U39_13055 PF00403 Heavy-metal-associated domain E3U39_13060 PF13462 Thioredoxin E3U39_13065 PF02600 Disulfide bond formation protein DsbB E3U39_13075 PF03458 UPF0126 domain E3U39_13080 PF13538 UvrD-like helicase C-terminal domain E3U39_13085 PF00667 FAD binding domain E3U39_13085 PF00258 Flavodoxin E3U39_13085 PF00175 Oxidoreductase NAD-binding domain E3U39_13090 PF01077 Nitrite and sulphite reductase 4Fe-4S domain E3U39_13090 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain E3U39_13100 PF00999 Sodium/hydrogen exchanger family E3U39_13110 PF00248 Aldo/keto reductase family E3U39_13125 PF00005 ABC transporter E3U39_13130 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term E3U39_13130 PF07730 Histidine kinase E3U39_13130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_13130 PF00672 HAMP domain E3U39_13135 PF00072 Response regulator receiver domain E3U39_13135 PF00196 Bacterial regulatory proteins, luxR family E3U39_13140 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_13150 PF12727 PBP superfamily domain E3U39_13150 PF12728 Helix-turn-helix domain E3U39_13155 PF00884 Sulfatase E3U39_13160 PF04307 LexA-binding, inner membrane-associated putative hydrolase E3U39_13165 PF09575 Small spore protein J (Spore_SspJ) E3U39_13175 PF13520 Amino acid permease E3U39_13180 PF04072 Leucine carboxyl methyltransferase E3U39_13185 PF01497 Periplasmic binding protein E3U39_13190 PF01032 FecCD transport family E3U39_13195 PF01032 FecCD transport family E3U39_13200 PF00005 ABC transporter E3U39_13205 PF14184 Regulatory protein YrvL E3U39_13210 PF00190 Cupin E3U39_13215 PF12841 YvrJ protein family E3U39_13220 PF04545 Sigma-70, region 4 E3U39_13230 PF00072 Response regulator receiver domain E3U39_13230 PF00486 Transcriptional regulatory protein, C terminal E3U39_13235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_13235 PF00512 His Kinase A (phospho-acceptor) domain E3U39_13240 PF08450 SMP-30/Gluconolactonase/LRE-like region E3U39_13245 PF00106 short chain dehydrogenase E3U39_13250 PF01497 Periplasmic binding protein E3U39_13255 PF01032 FecCD transport family E3U39_13260 PF00005 ABC transporter E3U39_13265 PF01923 Cobalamin adenosyltransferase E3U39_13270 PF07690 Major Facilitator Superfamily E3U39_13280 PF04012 PspA/IM30 family E3U39_13285 PF13349 Putative adhesin E3U39_13290 PF09922 Cell wall-active antibiotics response 4TMS YvqF E3U39_13295 PF00672 HAMP domain E3U39_13295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_13295 PF07730 Histidine kinase E3U39_13300 PF00072 Response regulator receiver domain E3U39_13300 PF00196 Bacterial regulatory proteins, luxR family E3U39_13305 PF05504 Spore germination B3/ GerAC like, C-terminal E3U39_13310 PF03845 Spore germination protein E3U39_13315 PF03323 Bacillus/Clostridium GerA spore germination protein E3U39_13320 PF13113 Protein of unknown function (DUF3970) E3U39_13325 PF00206 Lyase E3U39_13325 PF10415 Fumarase C C-terminus E3U39_13330 PF00440 Bacterial regulatory proteins, tetR family E3U39_13340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_13340 PF00672 HAMP domain E3U39_13340 PF00512 His Kinase A (phospho-acceptor) domain E3U39_13345 PF00072 Response regulator receiver domain E3U39_13345 PF00486 Transcriptional regulatory protein, C terminal E3U39_13355 PF13180 PDZ domain E3U39_13360 PF00210 Ferritin-like domain E3U39_13365 PF00106 short chain dehydrogenase E3U39_13375 PF14039 YusW-like protein E3U39_13380 PF00005 ABC transporter E3U39_13385 PF10835 Protein of unknown function (DUF2573) E3U39_13395 PF06314 Acetoacetate decarboxylase (ADC) E3U39_13400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3U39_13400 PF03466 LysR substrate binding domain E3U39_13415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3U39_13415 PF03466 LysR substrate binding domain E3U39_13425 PF14552 Tautomerase enzyme E3U39_13430 PF07690 Major Facilitator Superfamily E3U39_13435 PF01047 MarR family E3U39_13440 PF07875 Coat F domain E3U39_13450 PF07690 Major Facilitator Superfamily E3U39_13455 PF01619 Proline dehydrogenase E3U39_13460 PF14115 YuzL-like protein E3U39_13465 PF00378 Enoyl-CoA hydratase/isomerase E3U39_13465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E3U39_13465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E3U39_13470 PF02803 Thiolase, C-terminal domain E3U39_13470 PF00108 Thiolase, N-terminal domain E3U39_13475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E3U39_13475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E3U39_13475 PF02770 Acyl-CoA dehydrogenase, middle domain E3U39_13480 PF03960 ArsC family E3U39_13485 PF01597 Glycine cleavage H-protein E3U39_13490 PF10830 Protein of unknown function (DUF2553) E3U39_13495 PF01751 Toprim domain E3U39_13500 PF00085 Thioredoxin E3U39_13505 PF02036 SCP-2 sterol transfer family E3U39_13510 PF00005 ABC transporter E3U39_13510 PF09383 NIL domain E3U39_13515 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_13520 PF03180 NLPA lipoprotein E3U39_13525 PF02627 Carboxymuconolactone decarboxylase family E3U39_13535 PF00005 ABC transporter E3U39_13540 PF01458 Uncharacterized protein family (UPF0051) E3U39_13545 PF00266 Aminotransferase class-V E3U39_13550 PF01592 NifU-like N terminal domain E3U39_13555 PF01458 Uncharacterized protein family (UPF0051) E3U39_13560 PF01374 Glycosyl hydrolase family 46 E3U39_13565 PF10903 Protein of unknown function (DUF2691) E3U39_13570 PF01209 ubiE/COQ5 methyltransferase family E3U39_13575 PF01266 FAD dependent oxidoreductase E3U39_13580 PF01541 GIY-YIG catalytic domain E3U39_13585 PF07853 Protein of unknown function (DUF1648) E3U39_13595 PF13411 MerR HTH family regulatory protein E3U39_13600 PF01380 SIS domain E3U39_13605 PF01547 Bacterial extracellular solute-binding protein E3U39_13610 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_13615 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_13620 PF00294 pfkB family carbohydrate kinase E3U39_13625 PF07702 UTRA domain E3U39_13625 PF00392 Bacterial regulatory proteins, gntR family E3U39_13630 PF03459 TOBE domain E3U39_13630 PF00005 ABC transporter E3U39_13630 PF17912 MalK OB fold domain E3U39_13635 PF04231 Endonuclease I E3U39_13640 PF01546 Peptidase family M20/M25/M40 E3U39_13645 PF00266 Aminotransferase class-V E3U39_13650 PF07690 Major Facilitator Superfamily E3U39_13690 PF17853 GGDEF-like domain E3U39_13690 PF13556 PucR C-terminal helix-turn-helix domain E3U39_13690 PF07905 Purine catabolism regulatory protein-like family E3U39_13695 PF01979 Amidohydrolase family E3U39_13705 PF01904 Protein of unknown function DUF72 E3U39_13710 PF01925 Sulfite exporter TauE/SafE E3U39_13715 PF02872 5'-nucleotidase, C-terminal domain E3U39_13720 PF09560 Sporulation protein YunB (Spo_YunB) E3U39_13725 PF01551 Peptidase family M23 E3U39_13730 PF04055 Radical SAM superfamily E3U39_13730 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family E3U39_13740 PF06265 Protein of unknown function (DUF1027) E3U39_13745 PF01934 Protein of unknown function DUF86 E3U39_13750 PF13344 Haloacid dehalogenase-like hydrolase E3U39_13755 PF04608 Phosphatidylglycerophosphatase A E3U39_13765 PF03447 Homoserine dehydrogenase, NAD binding domain E3U39_13765 PF01842 ACT domain E3U39_13765 PF00742 Homoserine dehydrogenase E3U39_13770 PF00291 Pyridoxal-phosphate dependent enzyme E3U39_13775 PF08544 GHMP kinases C terminal E3U39_13775 PF00288 GHMP kinases N terminal domain E3U39_13780 PF00326 Prolyl oligopeptidase family E3U39_13780 PF07676 WD40-like Beta Propeller Repeat E3U39_13785 PF01106 NifU-like domain E3U39_13790 PF07315 Protein of unknown function (DUF1462) E3U39_13795 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3U39_13800 PF07293 Protein of unknown function (DUF1450) E3U39_13805 PF07662 Na+ dependent nucleoside transporter C-terminus E3U39_13805 PF01773 Na+ dependent nucleoside transporter N-terminus E3U39_13810 PF01678 Diaminopimelate epimerase E3U39_13815 PF01521 Iron-sulphur cluster biosynthesis E3U39_13820 PF00106 short chain dehydrogenase E3U39_13825 PF13302 Acetyltransferase (GNAT) domain E3U39_13845 PF00005 ABC transporter E3U39_13860 PF00478 IMP dehydrogenase / GMP reductase domain E3U39_13865 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3U39_13875 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3U39_13880 PF17302 Family of unknown function (DUF5351) E3U39_13885 PF14068 Putative membrane protein E3U39_13890 PF06725 3D domain E3U39_13895 PF02681 Divergent PAP2 family E3U39_13900 PF02789 Cytosol aminopeptidase family, N-terminal domain E3U39_13900 PF00883 Cytosol aminopeptidase family, catalytic domain E3U39_13905 PF03553 Na+/H+ antiporter family E3U39_13905 PF13726 Na+-H+ antiporter family E3U39_13910 PF02632 BioY family E3U39_13915 PF00174 Oxidoreductase molybdopterin binding domain E3U39_13920 PF00756 Putative esterase E3U39_13925 PF00106 short chain dehydrogenase E3U39_13930 PF00425 chorismate binding enzyme E3U39_13935 PF13193 AMP-binding enzyme C-terminal domain E3U39_13935 PF00501 AMP-binding enzyme E3U39_13940 PF00857 Isochorismatase family E3U39_13940 PF00550 Phosphopantetheine attachment site E3U39_13945 PF00975 Thioesterase domain E3U39_13945 PF00550 Phosphopantetheine attachment site E3U39_13945 PF00668 Condensation domain E3U39_13945 PF13193 AMP-binding enzyme C-terminal domain E3U39_13945 PF00501 AMP-binding enzyme E3U39_13950 PF03621 MbtH-like protein E3U39_13955 PF10042 Uncharacterized conserved protein (DUF2278) E3U39_13960 PF01262 Alanine dehydrogenase/PNT, C-terminal domain E3U39_13960 PF05222 Alanine dehydrogenase/PNT, N-terminal domain E3U39_13965 PF13556 PucR C-terminal helix-turn-helix domain E3U39_13965 PF17853 GGDEF-like domain E3U39_13965 PF06018 CodY GAF-like domain E3U39_13970 PF06013 Proteins of 100 residues with WXG E3U39_13975 PF08817 WXG100 protein secretion system (Wss), protein YukD E3U39_13980 PF10140 WXG100 protein secretion system (Wss), protein YukC E3U39_13985 PF12538 DNA transporter E3U39_13985 PF01580 FtsK/SpoIIIE family E3U39_13995 PF17355 Family of unknown function (DUF5383) E3U39_14000 PF00106 short chain dehydrogenase E3U39_14005 PF01966 HD domain E3U39_14010 PF10842 Protein of unknown function (DUF2642) E3U39_14015 PF01594 AI-2E family transporter E3U39_14020 PF10676 Spore germination protein gerPA/gerPF E3U39_14025 PF14166 YueH-like protein E3U39_14030 PF07997 Protein of unknown function (DUF1694) E3U39_14035 PF00857 Isochorismatase family E3U39_14040 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E3U39_14040 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain E3U39_14040 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E3U39_14045 PF00563 EAL domain E3U39_14045 PF08668 HDOD domain E3U39_14060 PF08181 DegQ (SacQ) family E3U39_14065 PF00348 Polyprenyl synthetase E3U39_14075 PF07730 Histidine kinase E3U39_14075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_14080 PF00072 Response regulator receiver domain E3U39_14080 PF00196 Bacterial regulatory proteins, luxR family E3U39_14085 PF03061 Thioesterase superfamily E3U39_14090 PF03334 Na+/H+ antiporter subunit E3U39_14095 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) E3U39_14100 PF01899 Na+/H+ ion antiporter subunit E3U39_14105 PF00361 Proton-conducting membrane transporter E3U39_14110 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L E3U39_14115 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter E3U39_14120 PF13244 Domain of unknown function (DUF4040) E3U39_14120 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E3U39_14120 PF00361 Proton-conducting membrane transporter E3U39_14150 PF00072 Response regulator receiver domain E3U39_14155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_14155 PF00989 PAS fold E3U39_14155 PF17203 Single cache domain 3 E3U39_14155 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E3U39_14160 PF17328 Family of unknown function (DUF5366) E3U39_14165 PF04134 Protein of unknown function, DUF393 E3U39_14170 PF00905 Penicillin binding protein transpeptidase domain E3U39_14170 PF00912 Transglycosylase E3U39_14175 PF07690 Major Facilitator Superfamily E3U39_14180 PF00929 Exonuclease E3U39_14185 PF08810 Kinase associated protein B E3U39_14190 PF00512 His Kinase A (phospho-acceptor) domain E3U39_14190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_14195 PF00155 Aminotransferase class I and II E3U39_14200 PF08958 Domain of unknown function (DUF1871) E3U39_14205 PF08386 TAP-like protein E3U39_14205 PF00561 alpha/beta hydrolase fold E3U39_14210 PF01037 Lrp/AsnC ligand binding domain E3U39_14215 PF00155 Aminotransferase class I and II E3U39_14220 PF00575 S1 RNA binding domain E3U39_14225 PF04070 Domain of unknown function (DUF378) E3U39_14230 PF00465 Iron-containing alcohol dehydrogenase E3U39_14235 PF00465 Iron-containing alcohol dehydrogenase E3U39_14240 PF00857 Isochorismatase family E3U39_14245 PF03358 NADPH-dependent FMN reductase E3U39_14255 PF00342 Phosphoglucose isomerase E3U39_14265 PF08868 YugN-like family E3U39_14270 PF02254 TrkA-N domain E3U39_14270 PF07885 Ion channel E3U39_14275 PF11458 Membrane-integrating protein Mistic E3U39_14285 PF04298 Putative neutral zinc metallopeptidase E3U39_14290 PF00571 CBS domain E3U39_14290 PF03471 Transporter associated domain E3U39_14290 PF01595 Cyclin M transmembrane N-terminal domain E3U39_14295 PF00128 Alpha amylase, catalytic domain E3U39_14295 PF16657 Maltogenic Amylase, C-terminal domain E3U39_14300 PF01894 Uncharacterised protein family UPF0047 E3U39_14305 PF03060 Nitronate monooxygenase E3U39_14320 PF02743 Cache domain E3U39_14320 PF00672 HAMP domain E3U39_14320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3U39_14325 PF02743 Cache domain E3U39_14325 PF00672 HAMP domain E3U39_14325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3U39_14330 PF00672 HAMP domain E3U39_14330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3U39_14330 PF02743 Cache domain E3U39_14335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E3U39_14335 PF02743 Cache domain E3U39_14335 PF00672 HAMP domain E3U39_14340 PF01965 DJ-1/PfpI family E3U39_14345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E3U39_14345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E3U39_14350 PF01594 AI-2E family transporter E3U39_14355 PF02673 Bacitracin resistance protein BacA E3U39_14365 PF00589 Phage integrase family E3U39_14365 PF14659 Phage integrase, N-terminal SAM-like domain E3U39_14475 PF00239 Resolvase, N terminal domain E3U39_14475 PF02796 Helix-turn-helix domain of resolvase E3U39_14510 PF01464 Transglycosylase SLT domain E3U39_14510 PF10145 Phage-related minor tail protein E3U39_14510 PF01551 Peptidase family M23 E3U39_14515 PF06605 Prophage endopeptidase tail E3U39_14575 PF00970 Oxidoreductase FAD-binding domain E3U39_14575 PF00175 Oxidoreductase NAD-binding domain E3U39_14575 PF00042 Globin E3U39_14580 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E3U39_14580 PF13457 GW (Gly-Tryp) dipeptide domain E3U39_14585 PF02080 TrkA-C domain E3U39_14585 PF02254 TrkA-N domain E3U39_14590 PF17735 Biofilm surface layer A E3U39_14605 PF00465 Iron-containing alcohol dehydrogenase E3U39_14615 PF12867 DinB superfamily E3U39_14625 PF15975 Flotillin E3U39_14625 PF01145 SPFH domain / Band 7 family E3U39_14630 PF09515 Thiamine transporter protein (Thia_YuaJ) E3U39_14765 PF03073 TspO/MBR family E3U39_14770 PF01258 Prokaryotic dksA/traR C4-type zinc finger E3U39_14775 PF00425 chorismate binding enzyme E3U39_14780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3U39_14780 PF16582 Middle domain of thiamine pyrophosphate E3U39_14780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3U39_14785 PF00561 alpha/beta hydrolase fold E3U39_14790 PF00378 Enoyl-CoA hydratase/isomerase E3U39_14795 PF13193 AMP-binding enzyme C-terminal domain E3U39_14795 PF00501 AMP-binding enzyme E3U39_14800 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain E3U39_14800 PF13378 Enolase C-terminal domain-like E3U39_14805 PF07561 Domain of Unknown Function (DUF1540) E3U39_14810 PF02322 Cytochrome bd terminal oxidase subunit II E3U39_14815 PF01654 Cytochrome bd terminal oxidase subunit I E3U39_14820 PF01197 Ribosomal protein L31 E3U39_14825 PF00484 Carbonic anhydrase E3U39_14830 PF01809 Putative membrane protein insertion efficiency factor E3U39_14835 PF02664 S-Ribosylhomocysteinase (LuxS) E3U39_14840 PF13115 YtkA-like E3U39_14850 PF00210 Ferritin-like domain E3U39_14855 PF05105 Bacteriophage holin family E3U39_14860 PF00293 NUDIX domain E3U39_14865 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_14870 PF00005 ABC transporter E3U39_14880 PF00326 Prolyl oligopeptidase family E3U39_14885 PF10763 Protein of unknown function (DUF2584) E3U39_14890 PF01293 Phosphoenolpyruvate carboxykinase E3U39_14895 PF02772 S-adenosylmethionine synthetase, central domain E3U39_14895 PF00438 S-adenosylmethionine synthetase, N-terminal domain E3U39_14895 PF02773 S-adenosylmethionine synthetase, C-terminal domain E3U39_14900 PF13537 Glutamine amidotransferase domain E3U39_14900 PF00733 Asparagine synthase E3U39_14905 PF00324 Amino acid permease E3U39_14910 PF00132 Bacterial transferase hexapeptide (six repeats) E3U39_14915 PF12146 Serine aminopeptidase, S33 E3U39_14920 PF10776 Protein of unknown function (DUF2600) E3U39_14925 PF03009 Glycerophosphoryl diester phosphodiesterase family E3U39_14935 PF06962 Putative rRNA methylase E3U39_14940 PF04055 Radical SAM superfamily E3U39_14940 PF16199 Radical_SAM C-terminal domain E3U39_14945 PF07690 Major Facilitator Superfamily E3U39_14950 PF01022 Bacterial regulatory protein, arsR family E3U39_14955 PF10732 Protein of unknown function (DUF2524) E3U39_14960 PF00392 Bacterial regulatory proteins, gntR family E3U39_14965 PF00005 ABC transporter E3U39_14985 PF00005 ABC transporter E3U39_14990 PF12704 MacB-like periplasmic core domain E3U39_14990 PF02687 FtsX-like permease family E3U39_14995 PF00486 Transcriptional regulatory protein, C terminal E3U39_14995 PF00072 Response regulator receiver domain E3U39_15000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_15005 PF00005 ABC transporter E3U39_15010 PF02687 FtsX-like permease family E3U39_15015 PF09529 Integral membrane protein (intg_mem_TP0381) E3U39_15020 PF07690 Major Facilitator Superfamily E3U39_15025 PF13426 PAS domain E3U39_15025 PF01740 STAS domain E3U39_15030 PF14074 Protein of unknown function (DUF4257) E3U39_15035 PF08264 Anticodon-binding domain of tRNA E3U39_15035 PF00133 tRNA synthetases class I (I, L, M and V) E3U39_15035 PF09334 tRNA synthetases class I (M) E3U39_15035 PF13603 Leucyl-tRNA synthetase, Domain 2 E3U39_15040 PF00581 Rhodanese-like domain E3U39_15050 PF02056 Family 4 glycosyl hydrolase E3U39_15050 PF11975 Family 4 glycosyl hydrolase C-terminal domain E3U39_15075 PF10957 Sporulation protein Cse60 E3U39_15080 PF02028 BCCT, betaine/carnitine/choline family transporter E3U39_15090 PF14667 Polysaccharide biosynthesis C-terminal domain E3U39_15090 PF01943 Polysaccharide biosynthesis protein E3U39_15095 PF00849 RNA pseudouridylate synthase E3U39_15095 PF01479 S4 domain E3U39_15100 PF08220 DeoR-like helix-turn-helix domain E3U39_15105 PF00005 ABC transporter E3U39_15110 PF05975 Bacterial ABC transporter protein EcsB E3U39_15115 PF00860 Permease family E3U39_15120 PF01546 Peptidase family M20/M25/M40 E3U39_15125 PF00291 Pyridoxal-phosphate dependent enzyme E3U39_15140 PF00781 Diacylglycerol kinase catalytic domain E3U39_15145 PF01636 Phosphotransferase enzyme family E3U39_15150 PF14165 YtzH-like protein E3U39_15155 PF02390 Putative methyltransferase E3U39_15160 PF00753 Metallo-beta-lactamase superfamily E3U39_15165 PF03949 Malic enzyme, NAD binding domain E3U39_15165 PF00390 Malic enzyme, N-terminal domain E3U39_15170 PF03413 Peptidase propeptide and YPEB domain E3U39_15175 PF05343 M42 glutamyl aminopeptidase E3U39_15180 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ E3U39_15185 PF00085 Thioredoxin E3U39_15190 PF07285 Protein of unknown function (DUF1444) E3U39_15195 PF14794 Domain of unknown function (DUF4479) E3U39_15195 PF01588 Putative tRNA binding domain E3U39_15200 PF09397 Ftsk gamma domain E3U39_15200 PF17854 FtsK alpha domain E3U39_15200 PF01580 FtsK/SpoIIIE family E3U39_15205 PF01225 Mur ligase family, catalytic domain E3U39_15205 PF02875 Mur ligase family, glutamate ligase domain E3U39_15205 PF08245 Mur ligase middle domain E3U39_15210 PF06103 Bacterial protein of unknown function (DUF948) E3U39_15215 PF12732 YtxH-like protein E3U39_15220 PF11009 Protein of unknown function (DUF2847) E3U39_15225 PF00793 DAHP synthetase I family E3U39_15225 PF01817 Chorismate mutase type II E3U39_15230 PF00356 Bacterial regulatory proteins, lacI family E3U39_15235 PF01618 MotA/TolQ/ExbB proton channel family E3U39_15240 PF13677 Membrane MotB of proton-channel complex MotA/MotB E3U39_15240 PF00691 OmpA family E3U39_15245 PF00850 Histone deacetylase domain E3U39_15250 PF00571 CBS domain E3U39_15255 PF00583 Acetyltransferase (GNAT) family E3U39_15260 PF13193 AMP-binding enzyme C-terminal domain E3U39_15260 PF00501 AMP-binding enzyme E3U39_15270 PF00579 tRNA synthetases class I (W and Y) E3U39_15270 PF01479 S4 domain E3U39_15285 PF11495 Archaeal transcriptional regulator TrmB E3U39_15285 PF01978 Sugar-specific transcriptional regulator TrmB E3U39_15290 PF01545 Cation efflux family E3U39_15290 PF16916 Dimerisation domain of Zinc Transporter E3U39_15305 PF01965 DJ-1/PfpI family E3U39_15315 PF00042 Globin E3U39_15315 PF00970 Oxidoreductase FAD-binding domain E3U39_15315 PF00175 Oxidoreductase NAD-binding domain E3U39_15325 PF09346 SMI1 / KNR4 family (SUKH-1) E3U39_15330 PF00171 Aldehyde dehydrogenase family E3U39_15335 PF00163 Ribosomal protein S4/S9 N-terminal domain E3U39_15335 PF01479 S4 domain E3U39_15345 PF00990 Diguanylate cyclase, GGDEF domain E3U39_15350 PF13185 GAF domain E3U39_15355 PF00440 Bacterial regulatory proteins, tetR family E3U39_15360 PF02811 PHP domain E3U39_15365 PF06160 Septation ring formation regulator, EzrA E3U39_15370 PF05525 Branched-chain amino acid transport protein E3U39_15375 PF00266 Aminotransferase class-V E3U39_15380 PF02926 THUMP domain E3U39_15380 PF02568 Thiamine biosynthesis protein (ThiI) E3U39_15385 PF00269 Small, acid-soluble spore proteins, alpha/beta type E3U39_15390 PF13193 AMP-binding enzyme C-terminal domain E3U39_15390 PF00501 AMP-binding enzyme E3U39_15395 PF07969 Amidohydrolase family E3U39_15400 PF01513 ATP-NAD kinase E3U39_15405 PF01343 Peptidase family S49 E3U39_15410 PF06271 RDD family E3U39_15415 PF11167 Protein of unknown function (DUF2953) E3U39_15420 PF09579 Sporulation protein YtfJ (Spore_YtfJ) E3U39_15425 PF08534 Redoxin E3U39_15430 PF02384 N-6 DNA Methylase E3U39_15435 PF00871 Acetokinase family E3U39_15440 PF00994 Probable molybdopterin binding domain E3U39_15445 PF00764 Arginosuccinate synthase E3U39_15450 PF14698 Argininosuccinate lyase C-terminal E3U39_15450 PF00206 Lyase E3U39_15465 PF03061 Thioesterase superfamily E3U39_15465 PF00571 CBS domain E3U39_15465 PF07085 DRTGG domain E3U39_15465 PF00392 Bacterial regulatory proteins, gntR family E3U39_15470 PF14007 YtpI-like protein E3U39_15475 PF02272 DHHA1 domain E3U39_15475 PF01368 DHH family E3U39_15490 PF14034 Sporulation protein YtrH E3U39_15495 PF02811 PHP domain E3U39_15495 PF14579 Helix-hairpin-helix motif E3U39_15495 PF07733 Bacterial DNA polymerase III alpha NTPase domain E3U39_15495 PF01336 OB-fold nucleic acid binding domain E3U39_15495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E3U39_15500 PF03949 Malic enzyme, NAD binding domain E3U39_15500 PF00390 Malic enzyme, N-terminal domain E3U39_15505 PF01039 Carboxyl transferase domain E3U39_15505 PF17848 Acetyl-coA carboxylase zinc finger domain E3U39_15510 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E3U39_15515 PF00365 Phosphofructokinase E3U39_15520 PF00391 PEP-utilising enzyme, mobile domain E3U39_15520 PF00224 Pyruvate kinase, barrel domain E3U39_15520 PF02887 Pyruvate kinase, alpha/beta domain E3U39_15525 PF04186 FxsA cytoplasmic membrane protein E3U39_15530 PF01594 AI-2E family transporter E3U39_15535 PF04284 Protein of unknown function (DUF441) E3U39_15540 PF11208 Protein of unknown function (DUF2992) E3U39_15545 PF00285 Citrate synthase, C-terminal domain E3U39_15550 PF00180 Isocitrate/isopropylmalate dehydrogenase E3U39_15555 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain E3U39_15555 PF00056 lactate/malate dehydrogenase, NAD binding domain E3U39_15560 PF00486 Transcriptional regulatory protein, C terminal E3U39_15560 PF00072 Response regulator receiver domain E3U39_15565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_15565 PF00512 His Kinase A (phospho-acceptor) domain E3U39_15565 PF00989 PAS fold E3U39_15565 PF16736 Single Cache-like E3U39_15570 PF00476 DNA polymerase family A E3U39_15570 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E3U39_15570 PF01367 5'-3' exonuclease, C-terminal SAM fold E3U39_15575 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain E3U39_15575 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain E3U39_15575 PF06827 Zinc finger found in FPG and IleRS E3U39_15580 PF02659 Putative manganese efflux pump E3U39_15585 PF01121 Dephospho-CoA kinase E3U39_15590 PF00248 Aldo/keto reductase family E3U39_15595 PF07690 Major Facilitator Superfamily E3U39_15600 PF01638 HxlR-like helix-turn-helix E3U39_15605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E3U39_15605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E3U39_15610 PF02675 S-adenosylmethionine decarboxylase E3U39_15615 PF03477 ATP cone domain E3U39_15620 PF07261 Replication initiation and membrane attachment E3U39_15625 PF07319 Primosomal protein DnaI N-terminus E3U39_15625 PF01695 IstB-like ATP binding protein E3U39_15630 PF09335 SNARE associated Golgi protein E3U39_15635 PF08812 YtxC-like family E3U39_15640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E3U39_15640 PF02824 TGS domain E3U39_15640 PF03129 Anticodon binding domain E3U39_15640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E3U39_15650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_15650 PF06580 Histidine kinase E3U39_15650 PF07694 5TMR of 5TMR-LYT E3U39_15655 PF04397 LytTr DNA-binding domain E3U39_15655 PF00072 Response regulator receiver domain E3U39_15660 PF03788 LrgA family E3U39_15665 PF04172 LrgB-like family E3U39_15670 PF05198 Translation initiation factor IF-3, N-terminal domain E3U39_15670 PF00707 Translation initiation factor IF-3, C-terminal domain E3U39_15675 PF01632 Ribosomal protein L35 E3U39_15680 PF00453 Ribosomal protein L20 E3U39_15685 PF06961 Protein of unknown function (DUF1294) E3U39_15695 PF05343 M42 glutamyl aminopeptidase E3U39_15700 PF04616 Glycosyl hydrolases family 43 E3U39_15705 PF11762 L-arabinose isomerase C-terminal domain E3U39_15705 PF02610 L-arabinose isomerase E3U39_15710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3U39_15710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3U39_15715 PF00596 Class II Aldolase and Adducin N-terminal domain E3U39_15720 PF13344 Haloacid dehalogenase-like hydrolase E3U39_15725 PF13685 Iron-containing alcohol dehydrogenase E3U39_15730 PF01547 Bacterial extracellular solute-binding protein E3U39_15735 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_15740 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_15745 PF06964 Alpha-L-arabinofuranosidase C-terminal domain E3U39_15750 PF13722 5TM C-terminal transporter carbon starvation CstA E3U39_15750 PF02554 Carbon starvation protein CstA E3U39_15755 PF02754 Cysteine-rich domain E3U39_15755 PF13183 4Fe-4S dicluster domain E3U39_15760 PF01565 FAD binding domain E3U39_15760 PF02913 FAD linked oxidases, C-terminal domain E3U39_15765 PF05651 Putative sugar diacid recognition E3U39_15765 PF13556 PucR C-terminal helix-turn-helix domain E3U39_15765 PF17853 GGDEF-like domain E3U39_15770 PF14098 Small, acid-soluble spore protein I E3U39_15775 PF00588 SpoU rRNA Methylase family E3U39_15775 PF08032 RNA 2'-O ribose methyltransferase substrate binding E3U39_15780 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain E3U39_15780 PF01409 tRNA synthetases class II core domain (F) E3U39_15785 PF01588 Putative tRNA binding domain E3U39_15785 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E3U39_15785 PF03147 Ferredoxin-fold anticodon binding domain E3U39_15785 PF03483 B3/4 domain E3U39_15785 PF03484 tRNA synthetase B5 domain E3U39_15790 PF11858 Domain of unknown function (DUF3378) E3U39_15790 PF01351 Ribonuclease HII E3U39_15795 PF05164 Cell division protein ZapA E3U39_15800 PF02674 Colicin V production protein E3U39_15805 PF14716 Helix-hairpin-helix domain E3U39_15805 PF02811 PHP domain E3U39_15805 PF14791 DNA polymerase beta thumb E3U39_15810 PF01713 Smr domain E3U39_15810 PF00488 MutS domain V E3U39_15815 PF03994 Domain of Unknown Function (DUF350) E3U39_15820 PF10924 Protein of unknown function (DUF2711) E3U39_15825 PF00501 AMP-binding enzyme E3U39_15825 PF13193 AMP-binding enzyme C-terminal domain E3U39_15830 PF00440 Bacterial regulatory proteins, tetR family E3U39_15830 PF08359 YsiA-like protein, C-terminal region E3U39_15835 PF00378 Enoyl-CoA hydratase/isomerase E3U39_15840 PF01012 Electron transfer flavoprotein domain E3U39_15845 PF01012 Electron transfer flavoprotein domain E3U39_15845 PF00766 Electron transfer flavoprotein FAD-binding domain E3U39_15850 PF06964 Alpha-L-arabinofuranosidase C-terminal domain E3U39_15855 PF00085 Thioredoxin E3U39_15860 PF02151 UvrB/uvrC motif E3U39_15860 PF01541 GIY-YIG catalytic domain E3U39_15860 PF08459 UvrC Helix-hairpin-helix N-terminal E3U39_15870 PF01842 ACT domain E3U39_15870 PF13840 ACT domain E3U39_15870 PF00696 Amino acid kinase family E3U39_15875 PF10702 Protein of unknown function (DUF2507) E3U39_15880 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E3U39_15885 PF02910 Fumarate reductase flavoprotein C-term E3U39_15885 PF00890 FAD binding domain E3U39_15890 PF13183 4Fe-4S dicluster domain E3U39_15890 PF13085 2Fe-2S iron-sulfur cluster binding domain E3U39_15895 PF03061 Thioesterase superfamily E3U39_15900 PF00196 Bacterial regulatory proteins, luxR family E3U39_15905 PF01047 MarR family E3U39_15910 PF01177 Asp/Glu/Hydantoin racemase E3U39_15915 PF10646 Sporulation and spore germination E3U39_15920 PF03725 3' exoribonuclease family, domain 2 E3U39_15920 PF01138 3' exoribonuclease family, domain 1 E3U39_15925 PF01725 Ham1 family E3U39_15930 PF12850 Calcineurin-like phosphoesterase superfamily domain E3U39_15950 PF00271 Helicase conserved C-terminal domain E3U39_15950 PF08463 EcoEI R protein C-terminal E3U39_15950 PF04851 Type III restriction enzyme, res subunit E3U39_15950 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E3U39_15955 PF02384 N-6 DNA Methylase E3U39_15960 PF01420 Type I restriction modification DNA specificity domain E3U39_15990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E3U39_15990 PF00205 Thiamine pyrophosphate enzyme, central domain E3U39_15990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E3U39_15995 PF01842 ACT domain E3U39_15995 PF10369 Small subunit of acetolactate synthase E3U39_16000 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain E3U39_16000 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain E3U39_16005 PF00682 HMGL-like E3U39_16005 PF08502 LeuA allosteric (dimerisation) domain E3U39_16010 PF00180 Isocitrate/isopropylmalate dehydrogenase E3U39_16015 PF00330 Aconitase family (aconitate hydratase) E3U39_16020 PF00694 Aconitase C-terminal domain E3U39_16030 PF05698 Bacterial trigger factor protein (TF) C-terminus E3U39_16030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E3U39_16030 PF05697 Bacterial trigger factor protein (TF) E3U39_16035 PF10431 C-terminal, D2-small domain, of ClpB protein E3U39_16035 PF06689 ClpX C4-type zinc finger E3U39_16035 PF07724 AAA domain (Cdc48 subfamily) E3U39_16040 PF00004 ATPase family associated with various cellular activities (AAA) E3U39_16040 PF05362 Lon protease (S16) C-terminal proteolytic domain E3U39_16045 PF02190 ATP-dependent protease La (LON) substrate-binding domain E3U39_16045 PF00004 ATPase family associated with various cellular activities (AAA) E3U39_16045 PF05362 Lon protease (S16) C-terminal proteolytic domain E3U39_16050 PF01926 50S ribosome-binding GTPase E3U39_16060 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain E3U39_16060 PF01488 Shikimate / quinate 5-dehydrogenase E3U39_16060 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain E3U39_16065 PF01578 Cytochrome C assembly protein E3U39_16070 PF03900 Porphobilinogen deaminase, C-terminal domain E3U39_16070 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain E3U39_16075 PF02602 Uroporphyrinogen-III synthase HemD E3U39_16080 PF00490 Delta-aminolevulinic acid dehydratase E3U39_16085 PF00202 Aminotransferase class-III E3U39_16090 PF01476 LysM domain E3U39_16105 PF08264 Anticodon-binding domain of tRNA E3U39_16105 PF10458 Valyl tRNA synthetase tRNA binding arm E3U39_16105 PF00133 tRNA synthetases class I (I, L, M and V) E3U39_16110 PF08245 Mur ligase middle domain E3U39_16110 PF02875 Mur ligase family, glutamate ligase domain E3U39_16115 PF06750 Bacterial Peptidase A24 N-terminal domain E3U39_16115 PF01478 Type IV leader peptidase family E3U39_16120 PF05036 Sporulation related domain E3U39_16125 PF02545 Maf-like protein E3U39_16130 PF04002 RadC-like JAB domain E3U39_16140 PF04085 rod shape-determining protein MreC E3U39_16145 PF04093 rod shape-determining protein MreD E3U39_16150 PF03775 Septum formation inhibitor MinC, C-terminal domain E3U39_16155 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain E3U39_16160 PF01551 Peptidase family M23 E3U39_16165 PF02163 Peptidase family M50 E3U39_16170 PF00829 Ribosomal prokaryotic L21 protein E3U39_16175 PF04327 Cysteine protease Prp E3U39_16180 PF01016 Ribosomal L27 protein E3U39_16185 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain E3U39_16185 PF14682 Sporulation initiation phospho-transferase B, C-terminal E3U39_16190 PF01926 50S ribosome-binding GTPase E3U39_16190 PF09269 Domain of unknown function (DUF1967) E3U39_16190 PF01018 GTP1/OBG E3U39_16195 PF01842 ACT domain E3U39_16200 PF01842 ACT domain E3U39_16200 PF00800 Prephenate dehydratase E3U39_16205 PF08279 HTH domain E3U39_16205 PF02829 3H domain E3U39_16210 PF00266 Aminotransferase class-V E3U39_16215 PF00890 FAD binding domain E3U39_16215 PF02910 Fumarate reductase flavoprotein C-term E3U39_16220 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain E3U39_16220 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain E3U39_16225 PF02445 Quinolinate synthetase A protein E3U39_16230 PF01476 LysM domain E3U39_16235 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) E3U39_16245 PF08955 BofC C-terminal domain E3U39_16245 PF08977 Bypass of Forespore C, N terminal E3U39_16250 PF01330 RuvA N terminal domain E3U39_16250 PF07499 RuvA, C-terminal domain E3U39_16255 PF17864 RuvB AAA lid domain E3U39_16255 PF05491 RuvB C-terminal winged helix domain E3U39_16255 PF05496 Holliday junction DNA helicase RuvB P-loop domain E3U39_16260 PF11146 Protein of unknown function (DUF2905) E3U39_16265 PF02547 Queuosine biosynthesis protein E3U39_16270 PF01702 Queuine tRNA-ribosyltransferase E3U39_16275 PF02699 Preprotein translocase subunit E3U39_16280 PF12670 Protein of unknown function (DUF3792) E3U39_16285 PF04239 Protein of unknown function (DUF421) E3U39_16290 PF14667 Polysaccharide biosynthesis C-terminal domain E3U39_16290 PF01943 Polysaccharide biosynthesis protein E3U39_16295 PF13797 Post-transcriptional regulator E3U39_16300 PF02355 Protein export membrane protein E3U39_16300 PF07549 SecD/SecF GG Motif E3U39_16305 PF02080 TrkA-C domain E3U39_16310 PF06305 Lipopolysaccharide assembly protein A domain E3U39_16315 PF02272 DHHA1 domain E3U39_16315 PF10141 Single-strand DNA-specific exonuclease, C terminal domain E3U39_16315 PF01368 DHH family E3U39_16315 PF17768 RecJ OB domain E3U39_16320 PF00156 Phosphoribosyl transferase domain E3U39_16325 PF13291 ACT domain E3U39_16325 PF02824 TGS domain E3U39_16325 PF04607 Region found in RelA / SpoT proteins E3U39_16330 PF02580 D-Tyr-tRNA(Tyr) deacylase E3U39_16335 PF08239 Bacterial SH3 domain E3U39_16335 PF01520 N-acetylmuramoyl-L-alanine amidase E3U39_16340 PF13393 Histidyl-tRNA synthetase E3U39_16340 PF03129 Anticodon binding domain E3U39_16345 PF01336 OB-fold nucleic acid binding domain E3U39_16345 PF02938 GAD domain E3U39_16345 PF00152 tRNA synthetases class II (D, K and N) E3U39_16355 PF00899 ThiF family E3U39_16360 PF05496 Holliday junction DNA helicase RuvB P-loop domain E3U39_16360 PF12002 MgsA AAA+ ATPase C terminal E3U39_16360 PF16193 AAA C-terminal domain E3U39_16365 PF02082 Transcriptional regulator E3U39_16370 PF00266 Aminotransferase class-V E3U39_16380 PF13181 Tetratricopeptide repeat E3U39_16380 PF07719 Tetratricopeptide repeat E3U39_16385 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain E3U39_16385 PF13538 UvrD-like helicase C-terminal domain E3U39_16385 PF14490 Helix-hairpin-helix containing domain E3U39_16390 PF05239 PRC-barrel domain E3U39_16400 PF13056 Protein of unknown function (DUF3918) E3U39_16405 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_16410 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_16415 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3U39_16420 PF00005 ABC transporter E3U39_16425 PF01594 AI-2E family transporter E3U39_16430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E3U39_16430 PF01411 tRNA synthetases class II (A) E3U39_16430 PF02272 DHHA1 domain E3U39_16435 PF06135 IreB regulatory phosphoprotein E3U39_16440 PF03652 Holliday junction resolvase E3U39_16445 PF06949 Protein of unknown function (DUF1292) E3U39_16450 PF02618 YceG-like family E3U39_16470 PF00485 Phosphoribulokinase / Uridine kinase family E3U39_16485 PF01381 Helix-turn-helix E3U39_16525 PF17356 Phage-like element PBSX protein XtrA E3U39_16605 PF00589 Phage integrase family E3U39_16630 PF03354 Phage Terminase E3U39_16705 PF01476 LysM domain E3U39_16705 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E3U39_16710 PF12708 Pectate lyase superfamily protein E3U39_16710 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain E3U39_16730 PF05105 Bacteriophage holin family E3U39_16735 PF01471 Putative peptidoglycan binding domain E3U39_16735 PF01476 LysM domain E3U39_16735 PF01510 N-acetylmuramoyl-L-alanine amidase E3U39_16760 PF01272 Transcription elongation factor, GreA/GreB, C-term E3U39_16760 PF03449 Transcription elongation factor, N-terminal E3U39_16765 PF00905 Penicillin binding protein transpeptidase domain E3U39_16765 PF03717 Penicillin-binding Protein dimerisation domain E3U39_16770 PF07423 Domain of unknown function (DUF1510) E3U39_16775 PF10750 Protein of unknown function (DUF2536) E3U39_16780 PF13649 Methyltransferase domain E3U39_16785 PF01048 Phosphorylase superfamily E3U39_16790 PF00291 Pyridoxal-phosphate dependent enzyme E3U39_16795 PF01053 Cys/Met metabolism PLP-dependent enzyme E3U39_16800 PF14143 YrhC-like protein E3U39_16805 PF07849 Protein of unknown function (DUF1641) E3U39_16810 PF00384 Molybdopterin oxidoreductase E3U39_16810 PF01568 Molydopterin dinucleotide binding domain E3U39_16810 PF00037 4Fe-4S binding domain E3U39_16810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3U39_16810 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E3U39_16815 PF10057 Uncharacterized conserved protein (DUF2294) E3U39_16820 PF01226 Formate/nitrite transporter E3U39_16830 PF09501 Probable sporulation protein (Bac_small_yrzI) E3U39_16835 PF08241 Methyltransferase domain E3U39_16840 PF16295 Tetracyclin repressor-like, C-terminal domain E3U39_16840 PF00440 Bacterial regulatory proteins, tetR family E3U39_16845 PF00667 FAD binding domain E3U39_16845 PF00175 Oxidoreductase NAD-binding domain E3U39_16845 PF00067 Cytochrome P450 E3U39_16845 PF00258 Flavodoxin E3U39_16850 PF07690 Major Facilitator Superfamily E3U39_16855 PF03466 LysR substrate binding domain E3U39_16855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3U39_16860 PF04073 Aminoacyl-tRNA editing domain E3U39_16865 PF12706 Beta-lactamase superfamily domain E3U39_16870 PF08279 HTH domain E3U39_16870 PF05043 Mga helix-turn-helix domain E3U39_16870 PF00874 PRD domain E3U39_16870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3U39_16875 PF02378 Phosphotransferase system, EIIC E3U39_16875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit E3U39_16875 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 E3U39_16880 PF01238 Phosphomannose isomerase type I E3U39_16885 PF01418 Helix-turn-helix domain, rpiR family E3U39_16885 PF01380 SIS domain E3U39_16905 PF05163 DinB family E3U39_16910 PF00583 Acetyltransferase (GNAT) family E3U39_16915 PF08050 Tetracycline resistance leader peptide E3U39_16920 PF07690 Major Facilitator Superfamily E3U39_16935 PF00583 Acetyltransferase (GNAT) family E3U39_16945 PF04235 Protein of unknown function (DUF418) E3U39_16950 PF00072 Response regulator receiver domain E3U39_16950 PF00486 Transcriptional regulatory protein, C terminal E3U39_16955 PF00512 His Kinase A (phospho-acceptor) domain E3U39_16960 PF06146 Phosphate-starvation-inducible E E3U39_16985 PF00248 Aldo/keto reductase family E3U39_16995 PF10415 Fumarase C C-terminus E3U39_16995 PF00206 Lyase E3U39_17000 PF10844 Protein of unknown function (DUF2577) E3U39_17005 PF01177 Asp/Glu/Hydantoin racemase E3U39_17015 PF04545 Sigma-70, region 4 E3U39_17015 PF04542 Sigma-70 region 2 E3U39_17030 PF09335 SNARE associated Golgi protein E3U39_17035 PF01522 Polysaccharide deacetylase E3U39_17040 PF00657 GDSL-like Lipase/Acylhydrolase E3U39_17045 PF08970 Sporulation inhibitor A E3U39_17055 PF01926 50S ribosome-binding GTPase E3U39_17060 PF18317 Shikimate 5'-dehydrogenase C-terminal domain E3U39_17060 PF08501 Shikimate dehydrogenase substrate binding domain E3U39_17060 PF01488 Shikimate / quinate 5-dehydrogenase E3U39_17065 PF01985 CRS1 / YhbY (CRM) domain E3U39_17070 PF01467 Cytidylyltransferase-like E3U39_17075 PF01966 HD domain E3U39_17085 PF13649 Methyltransferase domain E3U39_17090 PF03807 NADP oxidoreductase coenzyme F420-dependent E3U39_17090 PF14748 Pyrroline-5-carboxylate reductase dimerisation E3U39_17095 PF10531 SLBB domain E3U39_17100 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E3U39_17105 PF13567 Domain of unknown function (DUF4131) E3U39_17105 PF00753 Metallo-beta-lactamase superfamily E3U39_17105 PF03772 Competence protein E3U39_17110 PF14141 YqzM-like protein E3U39_17120 PF06144 DNA polymerase III, delta subunit E3U39_17125 PF01649 Ribosomal protein S20 E3U39_17130 PF03418 Germination protease E3U39_17135 PF07454 Stage II sporulation protein P (SpoIIP) E3U39_17140 PF12438 Protein of unknown function (DUF3679) E3U39_17145 PF00009 Elongation factor Tu GTP binding domain E3U39_17145 PF03144 Elongation factor Tu domain 2 E3U39_17145 PF06421 GTP-binding protein LepA C-terminus E3U39_17145 PF00679 Elongation factor G C-terminus E3U39_17150 PF04055 Radical SAM superfamily E3U39_17150 PF06969 HemN C-terminal domain E3U39_17155 PF01628 HrcA protein C terminal domain E3U39_17160 PF01025 GrpE E3U39_17165 PF00012 Hsp70 protein E3U39_17170 PF01556 DnaJ C terminal domain E3U39_17170 PF00684 DnaJ central domain E3U39_17170 PF00226 DnaJ domain E3U39_17180 PF04452 RNA methyltransferase E3U39_17185 PF00919 Uncharacterized protein family UPF0004 E3U39_17185 PF01938 TRAM domain E3U39_17185 PF04055 Radical SAM superfamily E3U39_17190 PF02690 Na+/Pi-cotransporter E3U39_17195 PF01165 Ribosomal protein S21 E3U39_17200 PF09424 Yqey-like protein E3U39_17205 PF01972 Serine dehydrogenase proteinase E3U39_17205 PF01957 NfeD-like C-terminal, partner-binding E3U39_17210 PF12127 SigmaW regulon antibacterial E3U39_17220 PF07873 YabP family E3U39_17225 PF06898 Putative stage IV sporulation protein YqfD E3U39_17230 PF02562 PhoH-like protein E3U39_17235 PF07698 7TM receptor with intracellular HD hydrolase E3U39_17235 PF07697 7TM-HD extracellular E3U39_17235 PF01966 HD domain E3U39_17240 PF02130 Uncharacterized protein family UPF0054 E3U39_17245 PF01219 Prokaryotic diacylglycerol kinase E3U39_17250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E3U39_17255 PF01926 50S ribosome-binding GTPase E3U39_17255 PF07650 KH domain E3U39_17260 PF14006 YqzL-like protein E3U39_17265 PF11967 Recombination protein O N terminal E3U39_17265 PF02565 Recombination protein O C terminal E3U39_17270 PF02091 Glycyl-tRNA synthetase alpha subunit E3U39_17275 PF02092 Glycyl-tRNA synthetase beta subunit E3U39_17280 PF08279 HTH domain E3U39_17280 PF00571 CBS domain E3U39_17285 PF03618 Kinase/pyrophosphorylase E3U39_17290 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 E3U39_17295 PF01807 CHC2 zinc finger E3U39_17295 PF10410 DnaB-helicase binding domain of primase E3U39_17295 PF08275 DNA primase catalytic core, N-terminal domain E3U39_17300 PF04542 Sigma-70 region 2 E3U39_17300 PF04545 Sigma-70, region 4 E3U39_17300 PF04539 Sigma-70 region 3 E3U39_17300 PF03979 Sigma-70 factor, region 1.1 E3U39_17300 PF00140 Sigma-70 factor, region 1.2 E3U39_17305 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E3U39_17310 PF04816 tRNA (adenine(22)-N(1))-methyltransferase E3U39_17315 PF01784 NIF3 (NGG1p interacting factor 3) E3U39_17320 PF02401 LytB protein E3U39_17325 PF14181 YqfQ-like protein E3U39_17330 PF00271 Helicase conserved C-terminal domain E3U39_17330 PF00270 DEAD/DEAH box helicase E3U39_17335 PF01261 Xylose isomerase-like TIM barrel E3U39_17340 PF11116 Protein of unknown function (DUF2624) E3U39_17345 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E3U39_17345 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E3U39_17350 PF01475 Ferric uptake regulator family E3U39_17365 PF04551 GcpE protein E3U39_17375 PF06691 Protein of unknown function (DUF1189) E3U39_17380 PF04306 Protein of unknown function (DUF456) E3U39_17385 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E3U39_17385 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E3U39_17390 PF07690 Major Facilitator Superfamily E3U39_17400 PF12849 PBP superfamily domain E3U39_17405 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_17410 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_17415 PF00005 ABC transporter E3U39_17420 PF00005 ABC transporter E3U39_17435 PF00471 Ribosomal protein L33 E3U39_17440 PF01812 5-formyltetrahydrofolate cyclo-ligase family E3U39_17450 PF03553 Na+/H+ antiporter family E3U39_17455 PF06014 Bacterial protein of unknown function (DUF910) E3U39_17460 PF00480 ROK family E3U39_17465 PF00246 Zinc carboxypeptidase E3U39_17475 PF01910 Thiamine-binding protein E3U39_17480 PF10958 Protein of unknown function (DUF2759) E3U39_17485 PF00753 Metallo-beta-lactamase superfamily E3U39_17490 PF11117 Protein of unknown function (DUF2626) E3U39_17495 PF03960 ArsC family E3U39_17505 PF01740 STAS domain E3U39_17505 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain E3U39_17510 PF03471 Transporter associated domain E3U39_17510 PF00571 CBS domain E3U39_17510 PF01595 Cyclin M transmembrane N-terminal domain E3U39_17515 PF01544 CorA-like Mg2+ transporter protein E3U39_17520 PF00437 Type II/IV secretion system protein E3U39_17525 PF00482 Type II secretion system (T2SS), protein F E3U39_17530 PF07963 Prokaryotic N-terminal methylation motif E3U39_17535 PF07963 Prokaryotic N-terminal methylation motif E3U39_17545 PF15980 Putative Competence protein ComGF E3U39_17550 PF14173 ComG operon protein 7 E3U39_17555 PF14038 YqzE-like protein E3U39_17560 PF13028 Protein of unknown function (DUF3889) E3U39_17575 PF12389 Camelysin metallo-endopeptidase E3U39_17580 PF01381 Helix-turn-helix E3U39_17580 PF08671 Anti-repressor SinI E3U39_17585 PF08671 Anti-repressor SinI E3U39_17590 PF11079 Bacterial protein YqhG of unknown function E3U39_17595 PF00176 SNF2 family N-terminal domain E3U39_17595 PF00271 Helicase conserved C-terminal domain E3U39_17600 PF01571 Aminomethyltransferase folate-binding domain E3U39_17600 PF08669 Glycine cleavage T-protein C-terminal barrel domain E3U39_17605 PF02347 Glycine cleavage system P-protein E3U39_17610 PF02347 Glycine cleavage system P-protein E3U39_17615 PF00581 Rhodanese-like domain E3U39_17620 PF03099 Biotin/lipoate A/B protein ligase family E3U39_17625 PF01325 Iron dependent repressor, N-terminal DNA binding domain E3U39_17625 PF02742 Iron dependent repressor, metal binding and dimerisation domain E3U39_17630 PF01734 Patatin-like phospholipase E3U39_17640 PF07136 Protein of unknown function (DUF1385) E3U39_17645 PF11085 Conserved membrane protein YqhR E3U39_17650 PF00557 Metallopeptidase family M24 E3U39_17650 PF01321 Creatinase/Prolidase N-terminal domain E3U39_17655 PF01132 Elongation factor P (EF-P) OB domain E3U39_17655 PF08207 Elongation factor P (EF-P) KOW-like domain E3U39_17655 PF09285 Elongation factor P, C-terminal E3U39_17660 PF10942 Protein of unknown function (DUF2619) E3U39_17670 PF09548 Stage III sporulation protein AB (spore_III_AB) E3U39_17675 PF06686 Stage III sporulation protein AC/AD protein family E3U39_17680 PF06686 Stage III sporulation protein AC/AD protein family E3U39_17685 PF09546 Stage III sporulation protein AE (spore_III_AE) E3U39_17690 PF09581 Stage III sporulation protein AF (Spore_III_AF) E3U39_17700 PF12685 SpoIIIAH-like protein E3U39_17705 PF00364 Biotin-requiring enzyme E3U39_17710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E3U39_17710 PF00289 Biotin carboxylase, N-terminal domain E3U39_17710 PF02785 Biotin carboxylase C-terminal domain E3U39_17715 PF03780 Asp23 family, cell envelope-related function E3U39_17720 PF01029 NusB family E3U39_17725 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E3U39_17725 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E3U39_17730 PF02601 Exonuclease VII, large subunit E3U39_17730 PF13742 OB-fold nucleic acid binding domain E3U39_17735 PF02609 Exonuclease VII small subunit E3U39_17740 PF00348 Polyprenyl synthetase E3U39_17745 PF02780 Transketolase, C-terminal domain E3U39_17745 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E3U39_17745 PF02779 Transketolase, pyrimidine binding domain E3U39_17750 PF01479 S4 domain E3U39_17750 PF01728 FtsJ-like methyltransferase E3U39_17755 PF01316 Arginine repressor, DNA binding domain E3U39_17755 PF02863 Arginine repressor, C-terminal domain E3U39_17760 PF13476 AAA domain E3U39_17765 PF05580 SpoIVB peptidase S55 E3U39_17765 PF17820 PDZ domain E3U39_17770 PF00072 Response regulator receiver domain E3U39_17770 PF08769 Sporulation initiation factor Spo0A C terminal E3U39_17775 PF01168 Alanine racemase, N-terminal domain E3U39_17775 PF00842 Alanine racemase, C-terminal domain E3U39_17780 PF10676 Spore germination protein gerPA/gerPF E3U39_17785 PF10676 Spore germination protein gerPA/gerPF E3U39_17790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E3U39_17815 PF01520 N-acetylmuramoyl-L-alanine amidase E3U39_17820 PF03009 Glycerophosphoryl diester phosphodiesterase family E3U39_17825 PF02803 Thiolase, C-terminal domain E3U39_17825 PF00108 Thiolase, N-terminal domain E3U39_17830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain E3U39_17830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain E3U39_17835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E3U39_17835 PF02770 Acyl-CoA dehydrogenase, middle domain E3U39_17835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E3U39_17840 PF00285 Citrate synthase, C-terminal domain E3U39_17845 PF03972 MmgE/PrpD family E3U39_17855 PF11118 Protein of unknown function (DUF2627) E3U39_17860 PF00158 Sigma-54 interaction domain E3U39_17860 PF00989 PAS fold E3U39_17860 PF02954 Bacterial regulatory protein, Fis family E3U39_17865 PF01515 Phosphate acetyl/butaryl transferase E3U39_17870 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E3U39_17870 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E3U39_17875 PF00871 Acetokinase family E3U39_17880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain E3U39_17880 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3U39_17885 PF00676 Dehydrogenase E1 component E3U39_17890 PF02779 Transketolase, pyrimidine binding domain E3U39_17890 PF02780 Transketolase, C-terminal domain E3U39_17895 PF00364 Biotin-requiring enzyme E3U39_17895 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E3U39_17895 PF02817 e3 binding domain E3U39_17900 PF00781 Diacylglycerol kinase catalytic domain E3U39_17905 PF06491 Disulphide isomerase E3U39_17915 PF00497 Bacterial extracellular solute-binding proteins, family 3 E3U39_17920 PF00528 Binding-protein-dependent transport system inner membrane component E3U39_17925 PF00005 ABC transporter E3U39_17930 PF11728 Putative aromatic acid exporter C-terminal domain E3U39_17930 PF06081 Aromatic acid exporter family member 1 E3U39_17935 PF03734 L,D-transpeptidase catalytic domain E3U39_17945 PF01039 Carboxyl transferase domain E3U39_17950 PF01546 Peptidase family M20/M25/M40 E3U39_17950 PF07687 Peptidase dimerisation domain E3U39_17955 PF02096 60Kd inner membrane protein E3U39_17965 PF00817 impB/mucB/samB family E3U39_17965 PF11798 IMS family HHH motif E3U39_17965 PF11799 impB/mucB/samB family C-terminal domain E3U39_17970 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain E3U39_17970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase E3U39_17975 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain E3U39_17975 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain E3U39_17980 PF12706 Beta-lactamase superfamily domain E3U39_17985 PF00471 Ribosomal protein L33 E3U39_17990 PF12146 Serine aminopeptidase, S33 E3U39_17995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family E3U39_18010 PF02357 Transcription termination factor nusG E3U39_18010 PF00467 KOW motif E3U39_18020 PF00698 Acyl transferase domain E3U39_18020 PF03060 Nitronate monooxygenase E3U39_18035 PF00501 AMP-binding enzyme E3U39_18035 PF13193 AMP-binding enzyme C-terminal domain E3U39_18045 PF08242 Methyltransferase domain E3U39_18045 PF08659 KR domain E3U39_18045 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_18045 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_18045 PF00550 Phosphopantetheine attachment site E3U39_18045 PF14765 Polyketide synthase dehydratase E3U39_18045 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_18050 PF13193 AMP-binding enzyme C-terminal domain E3U39_18050 PF00501 AMP-binding enzyme E3U39_18050 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_18050 PF14765 Polyketide synthase dehydratase E3U39_18050 PF00550 Phosphopantetheine attachment site E3U39_18050 PF08659 KR domain E3U39_18050 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_18050 PF00668 Condensation domain E3U39_18050 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_18055 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_18055 PF08242 Methyltransferase domain E3U39_18055 PF14765 Polyketide synthase dehydratase E3U39_18055 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_18055 PF08659 KR domain E3U39_18055 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_18055 PF00550 Phosphopantetheine attachment site E3U39_18060 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_18060 PF00668 Condensation domain E3U39_18060 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_18060 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_18060 PF08659 KR domain E3U39_18060 PF00501 AMP-binding enzyme E3U39_18060 PF13193 AMP-binding enzyme C-terminal domain E3U39_18060 PF00550 Phosphopantetheine attachment site E3U39_18060 PF14765 Polyketide synthase dehydratase E3U39_18065 PF08659 KR domain E3U39_18065 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_18065 PF00501 AMP-binding enzyme E3U39_18065 PF00550 Phosphopantetheine attachment site E3U39_18065 PF13193 AMP-binding enzyme C-terminal domain E3U39_18065 PF00668 Condensation domain E3U39_18065 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_18065 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_18065 PF14765 Polyketide synthase dehydratase E3U39_18070 PF00550 Phosphopantetheine attachment site E3U39_18070 PF08242 Methyltransferase domain E3U39_18070 PF08659 KR domain E3U39_18070 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_18070 PF14765 Polyketide synthase dehydratase E3U39_18070 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_18070 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_18075 PF14765 Polyketide synthase dehydratase E3U39_18075 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_18075 PF00550 Phosphopantetheine attachment site E3U39_18075 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_18075 PF08659 KR domain E3U39_18075 PF08242 Methyltransferase domain E3U39_18075 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_18080 PF00067 Cytochrome P450 E3U39_18085 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal E3U39_18085 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal E3U39_18090 PF00378 Enoyl-CoA hydratase/isomerase E3U39_18095 PF03807 NADP oxidoreductase coenzyme F420-dependent E3U39_18095 PF14748 Pyrroline-5-carboxylate reductase dimerisation E3U39_18100 PF00753 Metallo-beta-lactamase superfamily E3U39_18105 PF00106 short chain dehydrogenase E3U39_18110 PF00291 Pyridoxal-phosphate dependent enzyme E3U39_18115 PF00485 Phosphoribulokinase / Uridine kinase family E3U39_18130 PF01594 AI-2E family transporter E3U39_18135 PF14164 YqzH-like protein E3U39_18140 PF08863 YolD-like protein E3U39_18145 PF00817 impB/mucB/samB family E3U39_18145 PF11799 impB/mucB/samB family C-terminal domain E3U39_18150 PF00583 Acetyltransferase (GNAT) family E3U39_18155 PF03992 Antibiotic biosynthesis monooxygenase E3U39_18160 PF04229 GrpB protein E3U39_18160 PF13673 Acetyltransferase (GNAT) domain E3U39_18165 PF01521 Iron-sulphur cluster biosynthesis E3U39_18170 PF10827 Protein of unknown function (DUF2552) E3U39_18175 PF12146 Serine aminopeptidase, S33 E3U39_18185 PF00248 Aldo/keto reductase family E3U39_18190 PF13072 Mother cell inhibitor of FtsZ E3U39_18195 PF00293 NUDIX domain E3U39_18205 PF01381 Helix-turn-helix E3U39_18210 PF17763 Glutaminase/Asparaginase C-terminal domain E3U39_18210 PF00710 Asparaginase, N-terminal E3U39_18215 PF10415 Fumarase C C-terminus E3U39_18215 PF00206 Lyase E3U39_18220 PF03553 Na+/H+ antiporter family E3U39_18225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E3U39_18225 PF00390 Malic enzyme, N-terminal domain E3U39_18225 PF03949 Malic enzyme, NAD binding domain E3U39_18240 PF01944 Stage II sporulation protein M E3U39_18245 PF01475 Ferric uptake regulator family E3U39_18250 PF14004 Protein of unknown function (DUF4227) E3U39_18255 PF00589 Phage integrase family E3U39_18255 PF02899 Phage integrase, N-terminal SAM-like domain E3U39_18260 PF01676 Metalloenzyme superfamily E3U39_18265 PF01048 Phosphorylase superfamily E3U39_18270 PF00768 D-alanyl-D-alanine carboxypeptidase E3U39_18270 PF07943 Penicillin-binding protein 5, C-terminal domain E3U39_18275 PF01740 STAS domain E3U39_18280 PF13581 Histidine kinase-like ATPase domain E3U39_18285 PF04545 Sigma-70, region 4 E3U39_18285 PF04539 Sigma-70 region 3 E3U39_18285 PF04542 Sigma-70 region 2 E3U39_18290 PF12164 Stage V sporulation protein AA E3U39_18295 PF13782 Stage V sporulation protein AB E3U39_18300 PF03862 SpoVAC/SpoVAEB sporulation membrane protein E3U39_18305 PF07451 Stage V sporulation protein AD (SpoVAD) E3U39_18310 PF03862 SpoVAC/SpoVAEB sporulation membrane protein E3U39_18315 PF14097 Stage V sporulation protein AE1 E3U39_18320 PF03323 Bacillus/Clostridium GerA spore germination protein E3U39_18325 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E3U39_18325 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E3U39_18330 PF06207 Protein of unknown function (DUF1002) E3U39_18335 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E3U39_18345 PF10502 Signal peptidase, peptidase S26 E3U39_18355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E3U39_18355 PF01872 RibD C-terminal domain E3U39_18360 PF00677 Lumazine binding domain E3U39_18365 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E3U39_18365 PF00925 GTP cyclohydrolase II E3U39_18370 PF00885 6,7-dimethyl-8-ribityllumazine synthase E3U39_18375 PF00583 Acetyltransferase (GNAT) family E3U39_18385 PF03745 Domain of unknown function (DUF309) E3U39_18395 PF02616 Segregation and condensation protein ScpA E3U39_18400 PF04079 Segregation and condensation complex subunit ScpB E3U39_18405 PF13047 Protein of unknown function (DUF3907) E3U39_18410 PF07943 Penicillin-binding protein 5, C-terminal domain E3U39_18410 PF00768 D-alanyl-D-alanine carboxypeptidase E3U39_18415 PF07670 Nucleoside recognition E3U39_18420 PF07670 Nucleoside recognition E3U39_18425 PF00849 RNA pseudouridylate synthase E3U39_18425 PF01479 S4 domain E3U39_18430 PF00578 AhpC/TSA family E3U39_18435 PF05140 ResB-like family E3U39_18440 PF01578 Cytochrome C assembly protein E3U39_18445 PF00486 Transcriptional regulatory protein, C terminal E3U39_18445 PF00072 Response regulator receiver domain E3U39_18450 PF00672 HAMP domain E3U39_18450 PF00989 PAS fold E3U39_18450 PF00512 His Kinase A (phospho-acceptor) domain E3U39_18450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_18450 PF18698 Histidine kinase sensor domain E3U39_18455 PF04542 Sigma-70 region 2 E3U39_18455 PF08281 Sigma-70, region 4 E3U39_18465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E3U39_18465 PF01842 ACT domain E3U39_18465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E3U39_18470 PF12822 ECF transporter, substrate-specific component E3U39_18480 PF14493 Helix-turn-helix domain E3U39_18485 PF00271 Helicase conserved C-terminal domain E3U39_18485 PF00270 DEAD/DEAH box helicase E3U39_18490 PF02517 CPBP intramembrane metalloprotease E3U39_18495 PF01476 LysM domain E3U39_18500 PF10864 Protein of unknown function (DUF2663) E3U39_18505 PF00149 Calcineurin-like phosphoesterase E3U39_18510 PF05389 Negative regulator of genetic competence (MecA) E3U39_18515 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain E3U39_18515 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase E3U39_18525 PF13367 PrsW family intramembrane metalloprotease E3U39_18530 PF01471 Putative peptidoglycan binding domain E3U39_18530 PF07486 Cell Wall Hydrolase E3U39_18535 PF14620 YpeB sporulation E3U39_18535 PF03413 Peptidase propeptide and YPEB domain E3U39_18540 PF07238 PilZ domain E3U39_18540 PF12945 Flagellar protein YcgR E3U39_18545 PF02224 Cytidylate kinase E3U39_18550 PF00575 S1 RNA binding domain E3U39_18555 PF01070 FMN-dependent dehydrogenase E3U39_18560 PF14140 YpzI-like protein E3U39_18570 PF01926 50S ribosome-binding GTPase E3U39_18570 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E3U39_18575 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E3U39_18575 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E3U39_18580 PF10966 Protein of unknown function (DUF2768) E3U39_18590 PF09547 Stage IV sporulation protein A (spore_IV_A) E3U39_18595 PF00216 Bacterial DNA-binding protein E3U39_18600 PF01227 GTP cyclohydrolase I E3U39_18605 PF02081 Tryptophan RNA-binding attenuator protein E3U39_18610 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 E3U39_18615 PF01209 ubiE/COQ5 methyltransferase family E3U39_18620 PF00348 Polyprenyl synthetase E3U39_18625 PF00334 Nucleoside diphosphate kinase E3U39_18630 PF03705 CheR methyltransferase, all-alpha domain E3U39_18630 PF01739 CheR methyltransferase, SAM binding domain E3U39_18635 PF01264 Chorismate synthase E3U39_18640 PF01761 3-dehydroquinate synthase E3U39_18645 PF07736 Chorismate mutase type I E3U39_18650 PF04715 Anthranilate synthase component I, N terminal region E3U39_18650 PF00425 chorismate binding enzyme E3U39_18655 PF00591 Glycosyl transferase family, a/b domain E3U39_18655 PF02885 Glycosyl transferase family, helical bundle domain E3U39_18660 PF00218 Indole-3-glycerol phosphate synthase E3U39_18665 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E3U39_18670 PF00291 Pyridoxal-phosphate dependent enzyme E3U39_18675 PF00290 Tryptophan synthase alpha chain E3U39_18680 PF00155 Aminotransferase class I and II E3U39_18685 PF02153 Prephenate dehydrogenase E3U39_18685 PF01842 ACT domain E3U39_18690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E3U39_18705 PF08864 UPF0302 domain E3U39_18705 PF08858 IDEAL domain E3U39_18710 PF10673 Protein of unknown function (DUF2487) E3U39_18715 PF00355 Rieske [2Fe-2S] domain E3U39_18720 PF00033 Cytochrome b/b6/petB E3U39_18725 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E3U39_18725 PF00032 Cytochrome b(C-terminal)/b6/petD E3U39_18730 PF07187 Protein of unknown function (DUF1405) E3U39_18735 PF09577 Sporulation protein YpjB (SpoYpjB) E3U39_18740 PF00190 Cupin E3U39_18745 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 E3U39_18745 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) E3U39_18750 PF03819 MazG nucleotide pyrophosphohydrolase domain E3U39_18755 PF01113 Dihydrodipicolinate reductase, N-terminus E3U39_18755 PF05173 Dihydrodipicolinate reductase, C-terminus E3U39_18760 PF02142 MGS-like domain E3U39_18765 PF02585 GlcNAc-PI de-N-acetylase E3U39_18770 PF13439 Glycosyltransferase Family 4 E3U39_18770 PF00534 Glycosyl transferases group 1 E3U39_18775 PF01743 Poly A polymerase head domain E3U39_18775 PF12627 Probable RNA and SrmB- binding site of polymerase A E3U39_18775 PF13735 tRNA nucleotidyltransferase domain 2 putative E3U39_18780 PF08279 HTH domain E3U39_18780 PF03099 Biotin/lipoate A/B protein ligase family E3U39_18780 PF02237 Biotin protein ligase C terminal domain E3U39_18785 PF02548 Ketopantoate hydroxymethyltransferase E3U39_18790 PF02569 Pantoate-beta-alanine ligase E3U39_18795 PF02261 Aspartate decarboxylase E3U39_18800 PF04851 Type III restriction enzyme, res subunit E3U39_18800 PF00929 Exonuclease E3U39_18800 PF13307 Helicase C-terminal domain E3U39_18805 PF14084 Protein of unknown function (DUF4264) E3U39_18810 PF03413 Peptidase propeptide and YPEB domain E3U39_18810 PF17881 Domain of unknown function (DUF5590) E3U39_18815 PF00155 Aminotransferase class I and II E3U39_18820 PF01336 OB-fold nucleic acid binding domain E3U39_18820 PF00152 tRNA synthetases class II (D, K and N) E3U39_18825 PF07261 Replication initiation and membrane attachment E3U39_18830 PF00633 Helix-hairpin-helix motif E3U39_18830 PF10576 Iron-sulfur binding domain of endonuclease III E3U39_18830 PF00730 HhH-GPD superfamily base excision DNA repair protein E3U39_18840 PF00905 Penicillin binding protein transpeptidase domain E3U39_18840 PF00912 Transglycosylase E3U39_18845 PF03838 Recombination protein U E3U39_18850 PF10720 Protein of unknown function (DUF2515) E3U39_18860 PF17522 Family of unknown function (DUF5446) E3U39_18865 PF08807 Bacterial domain of unknown function (DUF1798) E3U39_18870 PF14178 YppF-like protein E3U39_18875 PF14179 YppG-like protein E3U39_18885 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 E3U39_18890 PF00270 DEAD/DEAH box helicase E3U39_18890 PF09369 Domain of unknown function (DUF1998) E3U39_18890 PF00271 Helicase conserved C-terminal domain E3U39_18895 PF13482 RNase_H superfamily E3U39_18905 PF11122 Inner spore coat protein D E3U39_18910 PF06908 YspA SLOG family E3U39_18915 PF05103 DivIVA protein E3U39_18925 PF01170 Putative RNA methylase family UPF0020 E3U39_18925 PF02926 THUMP domain E3U39_18930 PF14139 YpzG-like protein E3U39_18940 PF13307 Helicase C-terminal domain E3U39_18945 PF02074 Carboxypeptidase Taq (M32) metallopeptidase E3U39_18950 PF00156 Phosphoribosyl transferase domain E3U39_18965 PF00565 Staphylococcal nuclease homologue E3U39_18965 PF05901 Excalibur calcium-binding domain E3U39_18975 PF04740 LXG domain of WXG superfamily E3U39_19005 PF09560 Sporulation protein YunB (Spo_YunB) E3U39_19010 PF08863 YolD-like protein E3U39_19015 PF11798 IMS family HHH motif E3U39_19015 PF11799 impB/mucB/samB family C-terminal domain E3U39_19015 PF00817 impB/mucB/samB family E3U39_19020 PF18801 response regulator aspartate phosphatase H, N terminal E3U39_19040 PF01471 Putative peptidoglycan binding domain E3U39_19040 PF01510 N-acetylmuramoyl-L-alanine amidase E3U39_19045 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain E3U39_19045 PF12708 Pectate lyase superfamily protein E3U39_19055 PF06605 Prophage endopeptidase tail E3U39_19060 PF05709 Phage tail protein E3U39_19065 PF01551 Peptidase family M23 E3U39_19065 PF01464 Transglycosylase SLT domain E3U39_19065 PF10145 Phage-related minor tail protein E3U39_19085 PF00589 Phage integrase family E3U39_19085 PF13495 Phage integrase, N-terminal SAM-like domain E3U39_19220 PF00216 Bacterial DNA-binding protein E3U39_19330 PF01757 Acyltransferase family E3U39_19340 PF13443 Cro/C1-type HTH DNA-binding domain E3U39_19345 PF13443 Cro/C1-type HTH DNA-binding domain E3U39_19460 PF13443 Cro/C1-type HTH DNA-binding domain E3U39_19525 PF06908 YspA SLOG family E3U39_19540 PF14037 YoqO-like protein E3U39_19560 PF01068 ATP dependent DNA ligase domain E3U39_19565 PF02586 SOS response associated peptidase (SRAP) E3U39_19585 PF05908 Poly-gamma-glutamate hydrolase E3U39_19590 PF13229 Right handed beta helix region E3U39_19650 PF06725 3D domain E3U39_19655 PF02223 Thymidylate kinase E3U39_19665 PF00005 ABC transporter E3U39_19760 PF07972 NrdI Flavodoxin like E3U39_19765 PF08343 Ribonucleotide reductase N-terminal E3U39_19765 PF00317 Ribonucleotide reductase, all-alpha domain E3U39_19765 PF02867 Ribonucleotide reductase, barrel domain E3U39_19765 PF14528 LAGLIDADG-like domain E3U39_19775 PF00268 Ribonucleotide reductase, small chain E3U39_19785 PF00085 Thioredoxin E3U39_19795 PF00692 dUTPase E3U39_19815 PF00303 Thymidylate synthase E3U39_19820 PF00186 Dihydrofolate reductase E3U39_19845 PF00269 Small, acid-soluble spore proteins, alpha/beta type E3U39_19850 PF00149 Calcineurin-like phosphoesterase E3U39_19890 PF13443 Cro/C1-type HTH DNA-binding domain E3U39_19910 PF00857 Isochorismatase family E3U39_19935 PF02797 Chalcone and stilbene synthases, C-terminal domain E3U39_19935 PF00195 Chalcone and stilbene synthases, N-terminal domain E3U39_19940 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family E3U39_19950 PF00350 Dynamin family E3U39_19955 PF10752 Protein of unknown function (DUF2533) E3U39_19965 PF01367 5'-3' exonuclease, C-terminal SAM fold E3U39_19965 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E3U39_19975 PF13456 Reverse transcriptase-like E3U39_19980 PF02592 Putative vitamin uptake transporter E3U39_19985 PF13456 Reverse transcriptase-like E3U39_19990 PF10782 Zinc-finger E3U39_19995 PF10819 Protein of unknown function (DUF2564) E3U39_20005 PF00313 'Cold-shock' DNA-binding domain E3U39_20015 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase E3U39_20015 PF00534 Glycosyl transferases group 1 E3U39_20020 PF04204 Homoserine O-succinyltransferase E3U39_20025 PF00255 Glutathione peroxidase E3U39_20030 PF01966 HD domain E3U39_20035 PF13769 Virulence factor E3U39_20035 PF08712 Scaffold protein Nfu/NifU N terminal E3U39_20040 PF00920 Dehydratase family E3U39_20045 PF06491 Disulphide isomerase E3U39_20050 PF04445 Putative SAM-dependent methyltransferase E3U39_20055 PF14005 YpjP-like protein E3U39_20060 PF00303 Thymidylate synthase E3U39_20065 PF00186 Dihydrofolate reductase E3U39_20075 PF03006 Haemolysin-III related E3U39_20080 PF00158 Sigma-54 interaction domain E3U39_20080 PF08461 Ribonuclease R winged-helix domain E3U39_20085 PF00585 C-terminal regulatory domain of Threonine dehydratase E3U39_20085 PF00291 Pyridoxal-phosphate dependent enzyme E3U39_20090 PF10751 Protein of unknown function (DUF2535) E3U39_20095 PF02630 SCO1/SenC E3U39_20100 PF13472 GDSL-like Lipase/Acylhydrolase family E3U39_20105 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) E3U39_20110 PF01047 MarR family E3U39_20115 PF01625 Peptide methionine sulfoxide reductase E3U39_20120 PF01641 SelR domain E3U39_20125 PF02719 Polysaccharide biosynthesis protein E3U39_20130 PF07508 Recombinase E3U39_20130 PF00239 Resolvase, N terminal domain E3U39_20165 PF18801 response regulator aspartate phosphatase H, N terminal E3U39_20175 PF14037 YoqO-like protein E3U39_20215 PF11518 Protein of unknown function (DUF3221) E3U39_20230 PF08485 Polysaccharide biosynthesis protein C-terminal E3U39_20230 PF02719 Polysaccharide biosynthesis protein E3U39_20235 PF02333 Phytase E3U39_20240 PF12996 DUF based on E. rectale Gene description (DUF3880) E3U39_20255 PF00535 Glycosyl transferase family 2 E3U39_20260 PF00583 Acetyltransferase (GNAT) family E3U39_20270 PF06445 GyrI-like small molecule binding domain E3U39_20275 PF00202 Aminotransferase class-III E3U39_20280 PF01144 Coenzyme A transferase E3U39_20285 PF01144 Coenzyme A transferase E3U39_20290 PF01546 Peptidase family M20/M25/M40 E3U39_20290 PF07687 Peptidase dimerisation domain E3U39_20295 PF00583 Acetyltransferase (GNAT) family E3U39_20300 PF12544 Lysine-2,3-aminomutase E3U39_20305 PF14122 YokU-like protein, putative antitoxin E3U39_20310 PF06855 YozE SAM-like fold E3U39_20325 PF14162 YozD-like protein E3U39_20330 PF01569 PAP2 superfamily E3U39_20335 PF14191 YodL-like E3U39_20345 PF01048 Phosphorylase superfamily E3U39_20350 PF02557 D-alanyl-D-alanine carboxypeptidase E3U39_20360 PF08241 Methyltransferase domain E3U39_20365 PF17820 PDZ domain E3U39_20365 PF01471 Putative peptidoglycan binding domain E3U39_20365 PF03572 Peptidase family S41 E3U39_20370 PF07702 UTRA domain E3U39_20370 PF00392 Bacterial regulatory proteins, gntR family E3U39_20375 PF00232 Glycosyl hydrolase family 1 E3U39_20385 PF00474 Sodium:solute symporter family E3U39_20390 PF11755 Protein of unknown function (DUF3311) E3U39_20395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily E3U39_20400 PF01738 Dienelactone hydrolase family E3U39_20405 PF00881 Nitroreductase family E3U39_20410 PF01638 HxlR-like helix-turn-helix E3U39_20420 PF14552 Tautomerase enzyme E3U39_20435 PF00892 EamA-like transporter family E3U39_20445 PF08830 Protein of unknown function (DUF1806) E3U39_20450 PF02585 GlcNAc-PI de-N-acetylase E3U39_20455 PF01740 STAS domain E3U39_20460 PF01554 MatE E3U39_20465 PF02457 DisA bacterial checkpoint controller nucleotide-binding E3U39_20465 PF10372 Bacterial membrane-spanning protein N-terminus E3U39_20470 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase E3U39_20475 PF00877 NlpC/P60 family E3U39_20475 PF01476 LysM domain E3U39_20480 PF00080 Copper/zinc superoxide dismutase (SODC) E3U39_20480 PF13627 Prokaryotic lipoprotein-attachment site E3U39_20485 PF07728 AAA domain (dynein-related subfamily) E3U39_20490 PF00092 von Willebrand factor type A domain E3U39_20495 PF16870 2-oxoglutarate dehydrogenase C-terminal E3U39_20495 PF02779 Transketolase, pyrimidine binding domain E3U39_20495 PF00676 Dehydrogenase E1 component E3U39_20500 PF00364 Biotin-requiring enzyme E3U39_20500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E3U39_20500 PF02817 e3 binding domain E3U39_20505 PF00753 Metallo-beta-lactamase superfamily E3U39_20510 PF01758 Sodium Bile acid symporter family E3U39_20515 PF00209 Sodium:neurotransmitter symporter family E3U39_20520 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E3U39_20520 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E3U39_20525 PF13243 Squalene-hopene cyclase C-terminal domain E3U39_20525 PF13249 Squalene-hopene cyclase N-terminal domain E3U39_20530 PF00171 Aldehyde dehydrogenase family E3U39_20545 PF08000 Bacterial PH domain E3U39_20560 PF00011 Hsp20/alpha crystallin family E3U39_20575 PF01258 Prokaryotic dksA/traR C4-type zinc finger E3U39_20580 PF02525 Flavodoxin-like fold E3U39_20590 PF00271 Helicase conserved C-terminal domain E3U39_20590 PF00270 DEAD/DEAH box helicase E3U39_20590 PF00570 HRDC domain E3U39_20590 PF09382 RQC domain E3U39_20590 PF16124 RecQ zinc-binding E3U39_20595 PF06725 3D domain E3U39_20595 PF01476 LysM domain E3U39_20605 PF17676 LD-carboxypeptidase C-terminal domain E3U39_20605 PF02016 LD-carboxypeptidase N-terminal domain E3U39_20615 PF18846 Bacterial archaeo-eukaryotic release factor family 5 E3U39_20620 PF04238 Protein of unknown function (DUF420) E3U39_20630 PF01022 Bacterial regulatory protein, arsR family E3U39_20640 PF00753 Metallo-beta-lactamase superfamily E3U39_20645 PF13305 Tetracyclin repressor-like, C-terminal domain E3U39_20645 PF00440 Bacterial regulatory proteins, tetR family E3U39_20650 PF07883 Cupin domain E3U39_20650 PF12833 Helix-turn-helix domain E3U39_20655 PF01588 Putative tRNA binding domain E3U39_20660 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH E3U39_20660 PF04740 LXG domain of WXG superfamily E3U39_20690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E3U39_20690 PF00384 Molybdopterin oxidoreductase E3U39_20690 PF01568 Molydopterin dinucleotide binding domain E3U39_20695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E3U39_20695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E3U39_20700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3U39_20700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3U39_20705 PF07690 Major Facilitator Superfamily E3U39_20715 PF06103 Bacterial protein of unknown function (DUF948) E3U39_20720 PF00106 short chain dehydrogenase E3U39_20725 PF02334 Replication terminator protein E3U39_20730 PF03807 NADP oxidoreductase coenzyme F420-dependent E3U39_20730 PF14748 Pyrroline-5-carboxylate reductase dimerisation E3U39_20735 PF00696 Amino acid kinase family E3U39_20735 PF01472 PUA domain E3U39_20740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3U39_20740 PF03466 LysR substrate binding domain E3U39_20745 PF01493 GXGXG motif E3U39_20745 PF01645 Conserved region in glutamate synthase E3U39_20745 PF00310 Glutamine amidotransferases class-II E3U39_20745 PF04898 Glutamate synthase central domain E3U39_20750 PF07992 Pyridine nucleotide-disulphide oxidoreductase E3U39_20750 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E3U39_20755 PF00107 Zinc-binding dehydrogenase E3U39_20755 PF08240 Alcohol dehydrogenase GroES-like domain E3U39_20760 PF03466 LysR substrate binding domain E3U39_20760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E3U39_20765 PF02824 TGS domain E3U39_20765 PF03129 Anticodon binding domain E3U39_20765 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E3U39_20765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E3U39_20775 PF07690 Major Facilitator Superfamily E3U39_20785 PF12728 Helix-turn-helix domain E3U39_20790 PF00589 Phage integrase family E3U39_20800 PF16800 IseA DL-endopeptidase inhibitor E3U39_20805 PF01554 MatE E3U39_20810 PF01263 Aldose 1-epimerase E3U39_20815 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family E3U39_20825 PF00668 Condensation domain E3U39_20825 PF13193 AMP-binding enzyme C-terminal domain E3U39_20825 PF00550 Phosphopantetheine attachment site E3U39_20825 PF00501 AMP-binding enzyme E3U39_20830 PF00668 Condensation domain E3U39_20830 PF00501 AMP-binding enzyme E3U39_20830 PF13193 AMP-binding enzyme C-terminal domain E3U39_20830 PF00550 Phosphopantetheine attachment site E3U39_20835 PF00550 Phosphopantetheine attachment site E3U39_20835 PF00501 AMP-binding enzyme E3U39_20835 PF00668 Condensation domain E3U39_20835 PF13193 AMP-binding enzyme C-terminal domain E3U39_20840 PF13193 AMP-binding enzyme C-terminal domain E3U39_20840 PF00550 Phosphopantetheine attachment site E3U39_20840 PF00501 AMP-binding enzyme E3U39_20840 PF00668 Condensation domain E3U39_20845 PF00501 AMP-binding enzyme E3U39_20845 PF00975 Thioesterase domain E3U39_20845 PF13193 AMP-binding enzyme C-terminal domain E3U39_20845 PF00668 Condensation domain E3U39_20845 PF00550 Phosphopantetheine attachment site E3U39_20850 PF07098 Protein of unknown function (DUF1360) E3U39_20855 PF02638 Glycosyl hydrolase-like 10 E3U39_20860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain E3U39_20860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain E3U39_20860 PF02770 Acyl-CoA dehydrogenase, middle domain E3U39_20865 PF00501 AMP-binding enzyme E3U39_20865 PF13193 AMP-binding enzyme C-terminal domain E3U39_20870 PF00289 Biotin carboxylase, N-terminal domain E3U39_20870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E3U39_20870 PF02785 Biotin carboxylase C-terminal domain E3U39_20875 PF00364 Biotin-requiring enzyme E3U39_20880 PF00682 HMGL-like E3U39_20885 PF00378 Enoyl-CoA hydratase/isomerase E3U39_20890 PF01039 Carboxyl transferase domain E3U39_20895 PF09335 SNARE associated Golgi protein E3U39_20900 PF00483 Nucleotidyl transferase E3U39_20905 PF04138 GtrA-like protein E3U39_20910 PF03744 6-carboxyhexanoate--CoA ligase E3U39_20915 PF00202 Aminotransferase class-III E3U39_20920 PF00155 Aminotransferase class I and II E3U39_20930 PF06968 Biotin and Thiamin Synthesis associated domain E3U39_20930 PF04055 Radical SAM superfamily E3U39_20935 PF00067 Cytochrome P450 E3U39_20945 PF01144 Coenzyme A transferase E3U39_20950 PF01144 Coenzyme A transferase E3U39_20965 PF00698 Acyl transferase domain E3U39_20970 PF00550 Phosphopantetheine attachment site E3U39_20970 PF16197 Ketoacyl-synthetase C-terminal extension E3U39_20970 PF00668 Condensation domain E3U39_20970 PF13193 AMP-binding enzyme C-terminal domain E3U39_20970 PF00202 Aminotransferase class-III E3U39_20970 PF00109 Beta-ketoacyl synthase, N-terminal domain E3U39_20970 PF00501 AMP-binding enzyme E3U39_20970 PF02801 Beta-ketoacyl synthase, C-terminal domain E3U39_20975 PF00501 AMP-binding enzyme E3U39_20975 PF13193 AMP-binding enzyme C-terminal domain E3U39_20975 PF00668 Condensation domain E3U39_20975 PF00550 Phosphopantetheine attachment site E3U39_20980 PF00668 Condensation domain E3U39_20980 PF00501 AMP-binding enzyme E3U39_20980 PF13193 AMP-binding enzyme C-terminal domain E3U39_20980 PF00550 Phosphopantetheine attachment site E3U39_20980 PF00975 Thioesterase domain E3U39_20985 PF04616 Glycosyl hydrolases family 43 E3U39_20985 PF03422 Carbohydrate binding module (family 6) E3U39_20990 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain E3U39_20990 PF17189 Glycosyl hydrolase family 30 beta sandwich domain E3U39_20995 PF00486 Transcriptional regulatory protein, C terminal E3U39_20995 PF00072 Response regulator receiver domain E3U39_21000 PF00512 His Kinase A (phospho-acceptor) domain E3U39_21000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_21010 PF00150 Cellulase (glycosyl hydrolase family 5) E3U39_21010 PF00942 Cellulose binding domain E3U39_21025 PF14158 YndJ-like protein E3U39_21030 PF13761 Domain of unknown function (DUF4166) E3U39_21040 PF07690 Major Facilitator Superfamily E3U39_21045 PF00356 Bacterial regulatory proteins, lacI family E3U39_21050 PF00106 short chain dehydrogenase E3U39_21055 PF03786 D-mannonate dehydratase (UxuA) E3U39_21060 PF01081 KDPG and KHG aldolase E3U39_21065 PF00107 Zinc-binding dehydrogenase E3U39_21065 PF08240 Alcohol dehydrogenase GroES-like domain E3U39_21070 PF00294 pfkB family carbohydrate kinase E3U39_21075 PF01235 Sodium:alanine symporter family E3U39_21085 PF03989 DNA gyrase C-terminal domain, beta-propeller E3U39_21085 PF00521 DNA gyrase/topoisomerase IV, subunit A E3U39_21090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E3U39_21090 PF01751 Toprim domain E3U39_21090 PF00986 DNA gyrase B subunit, carboxyl terminus E3U39_21090 PF00204 DNA gyrase B E3U39_21095 PF13380 CoA binding domain E3U39_21100 PF02660 Glycerol-3-phosphate acyltransferase E3U39_21105 PF01521 Iron-sulphur cluster biosynthesis E3U39_21115 PF03061 Thioesterase superfamily E3U39_21125 PF08177 Small acid-soluble spore protein N family E3U39_21130 PF13040 Fur-regulated basic protein B E3U39_21135 PF00578 AhpC/TSA family E3U39_21140 PF00330 Aconitase family (aconitate hydratase) E3U39_21140 PF00694 Aconitase C-terminal domain E3U39_21150 PF08179 Small acid-soluble spore protein P family E3U39_21160 PF11084 Protein of unknown function (DUF2621) E3U39_21165 PF07301 Protein of unknown function (DUF1453) E3U39_21170 PF00072 Response regulator receiver domain E3U39_21175 PF02683 Cytochrome C biogenesis protein transmembrane region E3U39_21180 PF09388 Spo0E like sporulation regulatory protein E3U39_21185 PF03672 Uncharacterised protein family (UPF0154) E3U39_21190 PF10747 Sporulation inhibitor of replication protein SirA E3U39_21195 PF02779 Transketolase, pyrimidine binding domain E3U39_21195 PF02780 Transketolase, C-terminal domain E3U39_21195 PF00456 Transketolase, thiamine diphosphate binding domain E3U39_21200 PF05979 Bacterial protein of unknown function (DUF896) E3U39_21205 PF00239 Resolvase, N terminal domain E3U39_21210 PF01476 LysM domain E3U39_21215 PF01726 LexA DNA binding domain E3U39_21215 PF00717 Peptidase S24-like E3U39_21225 PF10710 Protein of unknown function (DUF2512) E3U39_21235 PF05908 Poly-gamma-glutamate hydrolase E3U39_21245 PF00692 dUTPase E3U39_21250 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain E3U39_21250 PF12708 Pectate lyase superfamily protein E3U39_21260 PF13302 Acetyltransferase (GNAT) domain E3U39_21265 PF09680 Family of unknown function E3U39_21270 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading E3U39_21270 PF18416 N-acetylglucosamine binding protein domain 2 E3U39_21280 PF13021 Domain of unknown function (DUF3885) E3U39_21295 PF00583 Acetyltransferase (GNAT) family E3U39_21295 PF14268 YoaP-like E3U39_21300 PF17094 Uncharacterised protein family (UPF0715) E3U39_21320 PF00107 Zinc-binding dehydrogenase E3U39_21320 PF08240 Alcohol dehydrogenase GroES-like domain E3U39_21345 PF00391 PEP-utilising enzyme, mobile domain E3U39_21345 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E3U39_21350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain E3U39_21350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain E3U39_21355 PF01261 Xylose isomerase-like TIM barrel E3U39_21360 PF00480 ROK family E3U39_21365 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain E3U39_21365 PF04616 Glycosyl hydrolases family 43