locus-tag class description KSO_000010 PF00468 Ribosomal protein L34 KSO_000015 PF00825 Ribonuclease P KSO_000020 PF02096 60Kd inner membrane protein KSO_000025 PF01424 R3H domain KSO_000025 PF14804 Jag N-terminus KSO_000030 PF10396 GTP-binding protein TrmE N-terminus KSO_000030 PF12631 MnmE helical domain KSO_000030 PF01926 50S ribosome-binding GTPase KSO_000035 PF13932 GidA associated domain KSO_000035 PF01134 Glucose inhibited division protein A KSO_000040 PF02527 rRNA small subunit methyltransferase G KSO_000045 PF17762 HTH domain found in ParB protein KSO_000045 PF02195 ParB-like nuclease domain KSO_000050 PF13614 AAA domain KSO_000055 PF02195 ParB-like nuclease domain KSO_000055 PF17762 HTH domain found in ParB protein KSO_000060 PF06866 Protein of unknown function (DUF1256) KSO_000075 PF06107 Bacterial protein of unknown function (DUF951) KSO_000080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KSO_000080 PF00384 Molybdopterin oxidoreductase KSO_000080 PF01568 Molydopterin dinucleotide binding domain KSO_000085 PF01926 50S ribosome-binding GTPase KSO_000085 PF06071 Protein of unknown function (DUF933) KSO_000090 PF01250 Ribosomal protein S6 KSO_000095 PF00436 Single-strand binding protein family KSO_000100 PF01084 Ribosomal protein S18 KSO_000105 PF12833 Helix-turn-helix domain KSO_000105 PF02805 Metal binding domain of Ada KSO_000110 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KSO_000110 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KSO_000115 PF03372 Endonuclease/Exonuclease/phosphatase family KSO_000120 PF00356 Bacterial regulatory proteins, lacI family KSO_000120 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KSO_000125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSO_000130 PF00083 Sugar (and other) transporter KSO_000135 PF02517 CPBP intramembrane metalloprotease KSO_000140 PF03190 Protein of unknown function, DUF255 KSO_000145 PF00893 Small Multidrug Resistance protein KSO_000150 PF01381 Helix-turn-helix KSO_000155 PF02082 Transcriptional regulator KSO_000160 PF02525 Flavodoxin-like fold KSO_000165 PF00892 EamA-like transporter family KSO_000170 PF00392 Bacterial regulatory proteins, gntR family KSO_000170 PF00155 Aminotransferase class I and II KSO_000180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_000180 PF03466 LysR substrate binding domain KSO_000205 PF01047 MarR family KSO_000210 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KSO_000210 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KSO_000215 PF01047 MarR family KSO_000220 PF00881 Nitroreductase family KSO_000230 PF07690 Major Facilitator Superfamily KSO_000235 PF05163 DinB family KSO_000240 PF00392 Bacterial regulatory proteins, gntR family KSO_000240 PF07729 FCD domain KSO_000245 PF08244 Glycosyl hydrolases family 32 C terminal KSO_000245 PF00251 Glycosyl hydrolases family 32 N-terminal domain KSO_000250 PF02435 Levansucrase/Invertase KSO_000255 PF00892 EamA-like transporter family KSO_000260 PF02833 DHHA2 domain KSO_000260 PF01368 DHH family KSO_000265 PF01638 HxlR-like helix-turn-helix KSO_000270 PF07875 Coat F domain KSO_000280 PF09991 Predicted membrane protein (DUF2232) KSO_000285 PF01368 DHH family KSO_000285 PF02272 DHHA1 domain KSO_000290 PF03948 Ribosomal protein L9, C-terminal domain KSO_000290 PF01281 Ribosomal protein L9, N-terminal domain KSO_000295 PF00069 Protein kinase domain KSO_000295 PF03793 PASTA domain KSO_000305 PF00534 Glycosyl transferases group 1 KSO_000305 PF13439 Glycosyltransferase Family 4 KSO_000310 PF02222 ATP-grasp domain KSO_000320 PF13439 Glycosyltransferase Family 4 KSO_000320 PF00534 Glycosyl transferases group 1 KSO_000325 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase KSO_000330 PF14174 YycC-like protein KSO_000340 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) KSO_000345 PF03796 DnaB-like helicase C terminal domain KSO_000345 PF00772 DnaB-like helicase N terminal domain KSO_000350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSO_000355 PF00709 Adenylosuccinate synthetase KSO_000365 PF00072 Response regulator receiver domain KSO_000365 PF00486 Transcriptional regulatory protein, C terminal KSO_000370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_000370 PF00512 His Kinase A (phospho-acceptor) domain KSO_000370 PF13426 PAS domain KSO_000370 PF00672 HAMP domain KSO_000375 PF07435 YycH protein KSO_000380 PF09648 YycH protein KSO_000385 PF00753 Metallo-beta-lactamase superfamily KSO_000390 PF13180 PDZ domain KSO_000400 PF00486 Transcriptional regulatory protein, C terminal KSO_000400 PF00072 Response regulator receiver domain KSO_000405 PF00672 HAMP domain KSO_000405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_000405 PF00512 His Kinase A (phospho-acceptor) domain KSO_000410 PF00899 ThiF family KSO_000425 PF00005 ABC transporter KSO_000425 PF16326 ABC transporter C-terminal domain KSO_000425 PF12848 ABC transporter KSO_000435 PF02954 Bacterial regulatory protein, Fis family KSO_000435 PF13426 PAS domain KSO_000435 PF00158 Sigma-54 interaction domain KSO_000440 PF01022 Bacterial regulatory protein, arsR family KSO_000445 PF13630 SdpI/YhfL protein family KSO_000445 PF07853 Protein of unknown function (DUF1648) KSO_000450 PF00202 Aminotransferase class-III KSO_000455 PF00324 Amino acid permease KSO_000460 PF00491 Arginase family KSO_000465 PF18801 response regulator aspartate phosphatase H, N terminal KSO_000475 PF00583 Acetyltransferase (GNAT) family KSO_000480 PF00248 Aldo/keto reductase family KSO_000505 PF14116 YyzF-like protein KSO_000510 PF02590 Predicted SPOUT methyltransferase KSO_000525 PF13276 HTH-like domain KSO_000525 PF00665 Integrase core domain KSO_000525 PF13333 Integrase core domain KSO_000560 PF06874 Firmicute fructose-1,6-bisphosphatase KSO_000570 PF13478 XdhC Rossmann domain KSO_000570 PF02625 XdhC and CoxI family KSO_000575 PF12804 MobA-like NTP transferase domain KSO_000580 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KSO_000580 PF00111 2Fe-2S iron-sulfur cluster binding domain KSO_000580 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KSO_000580 PF01799 [2Fe-2S] binding domain KSO_000590 PF01799 [2Fe-2S] binding domain KSO_000590 PF00111 2Fe-2S iron-sulfur cluster binding domain KSO_000595 PF06874 Firmicute fructose-1,6-bisphosphatase KSO_000600 PF00324 Amino acid permease KSO_000605 PF13192 Thioredoxin domain KSO_000605 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSO_000610 PF00578 AhpC/TSA family KSO_000620 PF06271 RDD family KSO_000625 PF07690 Major Facilitator Superfamily KSO_000635 PF17369 Family of unknown function (DUF5391) KSO_000640 PF13360 PQQ-like domain KSO_000640 PF13570 PQQ-like domain KSO_000640 PF01011 PQQ enzyme repeat KSO_000645 PF00171 Aldehyde dehydrogenase family KSO_000650 PF00440 Bacterial regulatory proteins, tetR family KSO_000655 PF00487 Fatty acid desaturase KSO_000660 PF07730 Histidine kinase KSO_000665 PF00072 Response regulator receiver domain KSO_000665 PF00196 Bacterial regulatory proteins, luxR family KSO_000680 PF00183 Hsp90 protein KSO_000680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_000685 PF00083 Sugar (and other) transporter KSO_000690 PF00248 Aldo/keto reductase family KSO_000695 PF08220 DeoR-like helix-turn-helix domain KSO_000695 PF00455 DeoR C terminal sensor domain KSO_000700 PF00171 Aldehyde dehydrogenase family KSO_000705 PF04962 KduI/IolB family KSO_000710 PF00294 pfkB family carbohydrate kinase KSO_000715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KSO_000715 PF00205 Thiamine pyrophosphate enzyme, central domain KSO_000715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KSO_000720 PF01261 Xylose isomerase-like TIM barrel KSO_000725 PF07690 Major Facilitator Superfamily KSO_000730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KSO_000730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KSO_000735 PF01261 Xylose isomerase-like TIM barrel KSO_000740 PF01261 Xylose isomerase-like TIM barrel KSO_000745 PF01116 Fructose-bisphosphate aldolase class-II KSO_000750 PF00072 Response regulator receiver domain KSO_000750 PF00486 Transcriptional regulatory protein, C terminal KSO_000755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_000760 PF00005 ABC transporter KSO_000765 PF02687 FtsX-like permease family KSO_000770 PF06486 Protein of unknown function (DUF1093) KSO_000775 PF01497 Periplasmic binding protein KSO_000795 PF11631 Protein of unknown function (DUF3255) KSO_000810 PF04198 Putative sugar-binding domain KSO_000815 PF01791 DeoC/LacD family aldolase KSO_000820 PF01773 Na+ dependent nucleoside transporter N-terminus KSO_000820 PF07662 Na+ dependent nucleoside transporter C-terminus KSO_000825 PF00591 Glycosyl transferase family, a/b domain KSO_000825 PF02885 Glycosyl transferase family, helical bundle domain KSO_000825 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KSO_000830 PF00324 Amino acid permease KSO_000835 PF00491 Arginase family KSO_000840 PF01979 Amidohydrolase family KSO_000845 PF01175 Urocanase Rossmann-like domain KSO_000845 PF17392 Urocanase C-terminal domain KSO_000845 PF17391 Urocanase N-terminal domain KSO_000850 PF00221 Aromatic amino acid lyase KSO_000855 PF09021 HutP KSO_000860 PF04616 Glycosyl hydrolases family 43 KSO_000860 PF16369 C-terminal lipocalin-like domain KSO_000865 PF00293 NUDIX domain KSO_000875 PF00582 Universal stress protein family KSO_000880 PF00892 EamA-like transporter family KSO_000885 PF00544 Pectate lyase KSO_000930 PF14176 YxiJ-like protein KSO_000940 PF10898 Protein of unknown function (DUF2716) KSO_000960 PF03880 DbpA RNA binding domain KSO_000960 PF00271 Helicase conserved C-terminal domain KSO_000960 PF00270 DEAD/DEAH box helicase KSO_000965 PF11700 Vacuole effluxer Atg22 like KSO_000985 PF00722 Glycosyl hydrolases family 16 KSO_000990 PF03600 Citrate transporter KSO_000995 PF00199 Catalase KSO_000995 PF18011 C-terminal domain found in long catalases KSO_000995 PF06628 Catalase-related immune-responsive KSO_001010 PF01773 Na+ dependent nucleoside transporter N-terminus KSO_001010 PF07662 Na+ dependent nucleoside transporter C-terminus KSO_001020 PF08241 Methyltransferase domain KSO_001025 PF01717 Cobalamin-independent synthase, Catalytic domain KSO_001030 PF04525 LURP-one-related KSO_001050 PF07687 Peptidase dimerisation domain KSO_001050 PF01546 Peptidase family M20/M25/M40 KSO_001055 PF16363 GDP-mannose 4,6 dehydratase KSO_001060 PF11611 Domain of unknown function (DUF4352) KSO_001065 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KSO_001065 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KSO_001070 PF13556 PucR C-terminal helix-turn-helix domain KSO_001075 PF03459 TOBE domain KSO_001075 PF00005 ABC transporter KSO_001075 PF17912 MalK OB fold domain KSO_001080 PF01522 Polysaccharide deacetylase KSO_001085 PF03390 2-hydroxycarboxylate transporter family KSO_001090 PF01654 Cytochrome bd terminal oxidase subunit I KSO_001095 PF02322 Cytochrome bd terminal oxidase subunit II KSO_001100 PF00664 ABC transporter transmembrane region KSO_001100 PF00005 ABC transporter KSO_001105 PF00664 ABC transporter transmembrane region KSO_001105 PF00005 ABC transporter KSO_001110 PF01256 Carbohydrate kinase KSO_001115 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KSO_001120 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KSO_001125 PF00199 Catalase KSO_001125 PF06628 Catalase-related immune-responsive KSO_001130 PF02156 Glycosyl hydrolase family 26 KSO_001135 PF01238 Phosphomannose isomerase type I KSO_001140 PF00480 ROK family KSO_001145 PF00232 Glycosyl hydrolase family 1 KSO_001150 PF02378 Phosphotransferase system, EIIC KSO_001155 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KSO_001160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KSO_001165 PF02040 Arsenical pump membrane protein KSO_001170 PF01022 Bacterial regulatory protein, arsR family KSO_001180 PF01032 FecCD transport family KSO_001185 PF01032 FecCD transport family KSO_001190 PF02245 Methylpurine-DNA glycosylase (MPG) KSO_001200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KSO_001200 PF00874 PRD domain KSO_001200 PF05043 Mga helix-turn-helix domain KSO_001200 PF08279 HTH domain KSO_001205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KSO_001210 PF02378 Phosphotransferase system, EIIC KSO_001215 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KSO_001220 PF02056 Family 4 glycosyl hydrolase KSO_001220 PF11975 Family 4 glycosyl hydrolase C-terminal domain KSO_001225 PF01063 Amino-transferase class IV KSO_001230 PF04914 DltD protein KSO_001235 PF00550 Phosphopantetheine attachment site KSO_001240 PF03062 MBOAT, membrane-bound O-acyltransferase family KSO_001245 PF13193 AMP-binding enzyme C-terminal domain KSO_001245 PF00501 AMP-binding enzyme KSO_001250 PF12459 D-Ala-teichoic acid biosynthesis protein KSO_001255 PF01040 UbiA prenyltransferase family KSO_001260 PF04607 Region found in RelA / SpoT proteins KSO_001265 PF01501 Glycosyl transferase family 8 KSO_001270 PF00082 Subtilase family KSO_001275 PF02378 Phosphotransferase system, EIIC KSO_001280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSO_001285 PF17785 PUA-like domain KSO_001285 PF10672 S-adenosylmethionine-dependent methyltransferase KSO_001290 PF07739 TipAS antibiotic-recognition domain KSO_001290 PF13411 MerR HTH family regulatory protein KSO_001295 PF09962 Uncharacterized conserved protein (DUF2196) KSO_001305 PF04172 LrgB-like family KSO_001310 PF03788 LrgA family KSO_001315 PF03466 LysR substrate binding domain KSO_001315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_001320 PF02110 Hydroxyethylthiazole kinase family KSO_001325 PF02581 Thiamine monophosphate synthase KSO_001330 PF09375 Imelysin KSO_001335 PF10518 TAT (twin-arginine translocation) pathway signal sequence KSO_001335 PF04261 Dyp-type peroxidase family KSO_001340 PF01323 DSBA-like thioredoxin domain KSO_001355 PF08671 Anti-repressor SinI KSO_001360 PF00440 Bacterial regulatory proteins, tetR family KSO_001365 PF04138 GtrA-like protein KSO_001370 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KSO_001370 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KSO_001375 PF04226 Transglycosylase associated protein KSO_001380 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KSO_001380 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KSO_001385 PF00115 Cytochrome C and Quinol oxidase polypeptide I KSO_001390 PF00510 Cytochrome c oxidase subunit III KSO_001395 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KSO_001400 PF17368 Spore morphogenesis and germination YwcE KSO_001405 PF00583 Acetyltransferase (GNAT) family KSO_001410 PF01098 Cell cycle protein KSO_001415 PF00881 Nitroreductase family KSO_001420 PF00296 Luciferase-like monooxygenase KSO_001425 PF05922 Peptidase inhibitor I9 KSO_001425 PF02225 PA domain KSO_001425 PF00082 Subtilase family KSO_001425 PF13860 FlgD Ig-like domain KSO_001435 PF03123 CAT RNA binding domain KSO_001435 PF00874 PRD domain KSO_001440 PF00367 phosphotransferase system, EIIB KSO_001440 PF02378 Phosphotransferase system, EIIC KSO_001445 PF08244 Glycosyl hydrolases family 32 C terminal KSO_001445 PF00251 Glycosyl hydrolases family 32 N-terminal domain KSO_001455 PF08543 Phosphomethylpyrimidine kinase KSO_001460 PF03551 Transcriptional regulator PadR-like family KSO_001475 PF00535 Glycosyl transferase family 2 KSO_001480 PF03167 Uracil DNA glycosylase superfamily KSO_001485 PF17261 Family of unknown function (DUF5327) KSO_001490 PF00860 Permease family KSO_001495 PF04241 Protein of unknown function (DUF423) KSO_001500 PF09671 Spore coat protein (Spore_GerQ) KSO_001505 PF00535 Glycosyl transferase family 2 KSO_001510 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KSO_001515 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KSO_001520 PF00583 Acetyltransferase (GNAT) family KSO_001525 PF08666 SAF domain KSO_001525 PF03102 NeuB family KSO_001530 PF02348 Cytidylyltransferase KSO_001535 PF04101 Glycosyltransferase family 28 C-terminal domain KSO_001540 PF00483 Nucleotidyl transferase KSO_001545 PF16363 GDP-mannose 4,6 dehydratase KSO_001550 PF04321 RmlD substrate binding domain KSO_001555 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KSO_001560 PF17735 Biofilm surface layer A KSO_001565 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KSO_001565 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KSO_001570 PF00171 Aldehyde dehydrogenase family KSO_001575 PF01546 Peptidase family M20/M25/M40 KSO_001580 PF00324 Amino acid permease KSO_001585 PF07690 Major Facilitator Superfamily KSO_001590 PF07690 Major Facilitator Superfamily KSO_001600 PF07883 Cupin domain KSO_001615 PF07690 Major Facilitator Superfamily KSO_001620 PF00155 Aminotransferase class I and II KSO_001635 PF01515 Phosphate acetyl/butaryl transferase KSO_001640 PF03601 Conserved hypothetical protein 698 KSO_001645 PF03466 LysR substrate binding domain KSO_001645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_001650 PF03099 Biotin/lipoate A/B protein ligase family KSO_001655 PF00005 ABC transporter KSO_001665 PF03551 Transcriptional regulator PadR-like family KSO_001675 PF07293 Protein of unknown function (DUF1450) KSO_001680 PF01966 HD domain KSO_001690 PF13520 Amino acid permease KSO_001700 PF01047 MarR family KSO_001705 PF01361 Tautomerase enzyme KSO_001710 PF02163 Peptidase family M50 KSO_001715 PF08741 YwhD family KSO_001725 PF00905 Penicillin binding protein transpeptidase domain KSO_001725 PF00912 Transglycosylase KSO_001730 PF17284 Spermidine synthase tetramerisation domain KSO_001735 PF00491 Arginase family KSO_001775 PF18801 response regulator aspartate phosphatase H, N terminal KSO_001780 PF09148 Domain of unknown function (DUF1934) KSO_001785 PF03485 Arginyl tRNA synthetase N terminal domain KSO_001785 PF00750 tRNA synthetases class I (R) KSO_001785 PF05746 DALR anticodon binding domain KSO_001790 PF07690 Major Facilitator Superfamily KSO_001795 PF00027 Cyclic nucleotide-binding domain KSO_001795 PF00325 Bacterial regulatory proteins, crp family KSO_001800 PF14256 YwiC-like protein KSO_001810 PF00384 Molybdopterin oxidoreductase KSO_001810 PF14710 Respiratory nitrate reductase alpha N-terminal KSO_001810 PF01568 Molydopterin dinucleotide binding domain KSO_001815 PF14711 Respiratory nitrate reductase beta C-terminal KSO_001815 PF13247 4Fe-4S dicluster domain KSO_001820 PF02613 Nitrate reductase delta subunit KSO_001825 PF02665 Nitrate reductase gamma subunit KSO_001835 PF13091 PLD-like domain KSO_001835 PF13396 Phospholipase_D-nuclease N-terminal KSO_001840 PF00664 ABC transporter transmembrane region KSO_001840 PF00005 ABC transporter KSO_001850 PF03851 UV-endonuclease UvdE KSO_001855 PF13091 PLD-like domain KSO_001860 PF02754 Cysteine-rich domain KSO_001860 PF13183 4Fe-4S dicluster domain KSO_001865 PF05066 HB1, ASXL, restriction endonuclease HTH domain KSO_001870 PF00117 Glutamine amidotransferase class-I KSO_001870 PF06418 CTP synthase N-terminus KSO_001875 PF10740 Domain of unknown function (DUF2529) KSO_001880 PF00072 Response regulator receiver domain KSO_001885 PF01116 Fructose-bisphosphate aldolase class-II KSO_001890 PF00923 Transaldolase/Fructose-6-phosphate aldolase KSO_001895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KSO_001900 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KSO_001910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KSO_001910 PF07498 Rho termination factor, N-terminal domain KSO_001910 PF07497 Rho termination factor, RNA-binding domain KSO_001915 PF01197 Ribosomal protein L31 KSO_001920 PF00265 Thymidine kinase KSO_001925 PF03949 Malic enzyme, NAD binding domain KSO_001925 PF00390 Malic enzyme, N-terminal domain KSO_001930 PF03547 Membrane transport protein KSO_001935 PF13411 MerR HTH family regulatory protein KSO_001940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSO_001945 PF03462 PCRF domain KSO_001945 PF00472 RF-1 domain KSO_001950 PF17827 PrmC N-terminal domain KSO_001950 PF05175 Methyltransferase small domain KSO_001955 PF17094 Uncharacterised protein family (UPF0715) KSO_001960 PF09551 Stage II sporulation protein R (spore_II_R) KSO_001970 PF03481 Putative GTP-binding controlling metal-binding KSO_001970 PF01300 Telomere recombination KSO_001975 PF02659 Putative manganese efflux pump KSO_001980 PF01451 Low molecular weight phosphotyrosine protein phosphatase KSO_001985 PF02502 Ribose/Galactose Isomerase KSO_001990 PF04260 Protein of unknown function (DUF436) KSO_001995 PF00464 Serine hydroxymethyltransferase KSO_002005 PF03899 ATP synthase I chain KSO_002010 PF00119 ATP synthase A chain KSO_002015 PF00137 ATP synthase subunit C KSO_002020 PF00430 ATP synthase B/B' CF(0) KSO_002025 PF00213 ATP synthase delta (OSCP) subunit KSO_002030 PF02874 ATP synthase alpha/beta family, beta-barrel domain KSO_002030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KSO_002030 PF00306 ATP synthase alpha/beta chain, C terminal domain KSO_002035 PF00231 ATP synthase KSO_002040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KSO_002040 PF02874 ATP synthase alpha/beta family, beta-barrel domain KSO_002045 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KSO_002045 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KSO_002055 PF06612 Protein of unknown function (DUF1146) KSO_002060 PF08680 TATA-box binding KSO_002065 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KSO_002070 PF08486 Stage II sporulation protein KSO_002075 PF00092 von Willebrand factor type A domain KSO_002080 PF00092 von Willebrand factor type A domain KSO_002090 PF02634 FdhD/NarQ family KSO_002095 PF04055 Radical SAM superfamily KSO_002095 PF06463 Molybdenum Cofactor Synthesis C KSO_002100 PF17874 MalT-like TPR region KSO_002100 PF18801 response regulator aspartate phosphatase H, N terminal KSO_002110 PF05532 CsbD-like KSO_002115 PF00547 Urease, gamma subunit KSO_002120 PF00699 Urease beta subunit KSO_002125 PF01979 Amidohydrolase family KSO_002125 PF00449 Urease alpha-subunit, N-terminal domain KSO_002130 PF02082 Transcriptional regulator KSO_002140 PF00457 Glycosyl hydrolases family 11 KSO_002150 PF17319 Family of unknown function (DUF5362) KSO_002155 PF13396 Phospholipase_D-nuclease N-terminal KSO_002155 PF13091 PLD-like domain KSO_002165 PF17370 Family of unknown function (DUF5392) KSO_002170 PF17319 Family of unknown function (DUF5362) KSO_002175 PF00583 Acetyltransferase (GNAT) family KSO_002180 PF01551 Peptidase family M23 KSO_002185 PF04892 VanZ like family KSO_002190 PF01569 PAP2 superfamily KSO_002195 PF01098 Cell cycle protein KSO_002200 PF00543 Nitrogen regulatory protein P-II KSO_002205 PF00909 Ammonium Transporter Family KSO_002210 PF00857 Isochorismatase family KSO_002215 PF07690 Major Facilitator Superfamily KSO_002220 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KSO_002225 PF07690 Major Facilitator Superfamily KSO_002230 PF01047 MarR family KSO_002235 PF12116 Stage III sporulation protein D KSO_002245 PF00460 Flagella basal body rod protein KSO_002245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KSO_002250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KSO_002250 PF00460 Flagella basal body rod protein KSO_002255 PF18801 response regulator aspartate phosphatase H, N terminal KSO_002260 PF07977 FabA-like domain KSO_002265 PF01741 Large-conductance mechanosensitive channel, MscL KSO_002270 PF14183 YwpF-like protein KSO_002280 PF00436 Single-strand binding protein family KSO_002285 PF08220 DeoR-like helix-turn-helix domain KSO_002285 PF00455 DeoR C terminal sensor domain KSO_002295 PF12419 SNF2 Helicase protein KSO_002295 PF00271 Helicase conserved C-terminal domain KSO_002295 PF00176 SNF2 family N-terminal domain KSO_002300 PF04434 SWIM zinc finger KSO_002310 PF02706 Chain length determinant protein KSO_002310 PF13807 G-rich domain on putative tyrosine kinase KSO_002315 PF13614 AAA domain KSO_002330 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KSO_002330 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KSO_002330 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KSO_002335 PF09234 Domain of unknown function (DUF1963) KSO_002340 PF16888 Domain of unknown function (DUF5082) KSO_002350 PF14449 Pre-toxin TG KSO_002350 PF14431 YwqJ-like deaminase KSO_002350 PF04740 LXG domain of WXG superfamily KSO_002375 PF04740 LXG domain of WXG superfamily KSO_002375 PF14449 Pre-toxin TG KSO_002400 PF04493 Endonuclease V KSO_002405 PF03466 LysR substrate binding domain KSO_002405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_002410 PF03358 NADPH-dependent FMN reductase KSO_002420 PF02417 Chromate transporter KSO_002425 PF02417 Chromate transporter KSO_002430 PF01037 Lrp/AsnC ligand binding domain KSO_002430 PF13404 AsnC-type helix-turn-helix domain KSO_002445 PF01613 Flavin reductase like domain KSO_002455 PF08757 CotH kinase protein KSO_002470 PF02040 Arsenical pump membrane protein KSO_002480 PF03466 LysR substrate binding domain KSO_002480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_002485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KSO_002485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KSO_002485 PF00205 Thiamine pyrophosphate enzyme, central domain KSO_002490 PF03306 Alpha-acetolactate decarboxylase KSO_002495 PF02525 Flavodoxin-like fold KSO_002500 PF08239 Bacterial SH3 domain KSO_002505 PF13407 Periplasmic binding protein domain KSO_002510 PF02653 Branched-chain amino acid transport system / permease component KSO_002515 PF00005 ABC transporter KSO_002520 PF05025 RbsD / FucU transport protein family KSO_002525 PF00294 pfkB family carbohydrate kinase KSO_002530 PF00356 Bacterial regulatory proteins, lacI family KSO_002540 PF03845 Spore germination protein KSO_002545 PF03323 Bacillus/Clostridium GerA spore germination protein KSO_002550 PF08245 Mur ligase middle domain KSO_002555 PF14102 Capsule biosynthesis CapC KSO_002560 PF09587 Bacterial capsule synthesis protein PGA_cap KSO_002570 PF00877 NlpC/P60 family KSO_002575 PF04791 LMBR1-like membrane protein KSO_002585 PF03816 Cell envelope-related transcriptional attenuator domain KSO_002590 PF00083 Sugar (and other) transporter KSO_002600 PF05504 Spore germination B3/ GerAC like, C-terminal KSO_002605 PF03845 Spore germination protein KSO_002610 PF03323 Bacillus/Clostridium GerA spore germination protein KSO_002615 PF01238 Phosphomannose isomerase type I KSO_002620 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KSO_002620 PF08239 Bacterial SH3 domain KSO_002620 PF05036 Sporulation related domain KSO_002625 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KSO_002630 PF03808 Glycosyl transferase WecB/TagA/CpsF family KSO_002635 PF01467 Cytidylyltransferase-like KSO_002640 PF00535 Glycosyl transferase family 2 KSO_002640 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 KSO_002645 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KSO_002650 PF01061 ABC-2 type transporter KSO_002655 PF00005 ABC transporter KSO_002660 PF00483 Nucleotidyl transferase KSO_002665 PF02350 UDP-N-acetylglucosamine 2-epimerase KSO_002670 PF03816 Cell envelope-related transcriptional attenuator domain KSO_002680 PF08486 Stage II sporulation protein KSO_002680 PF04122 Putative cell wall binding repeat 2 KSO_002685 PF01520 N-acetylmuramoyl-L-alanine amidase KSO_002685 PF04122 Putative cell wall binding repeat 2 KSO_002690 PF02397 Bacterial sugar transferase KSO_002695 PF14667 Polysaccharide biosynthesis C-terminal domain KSO_002695 PF01943 Polysaccharide biosynthesis protein KSO_002700 PF13439 Glycosyltransferase Family 4 KSO_002700 PF00534 Glycosyl transferases group 1 KSO_002705 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KSO_002705 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KSO_002705 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KSO_002710 PF04932 O-Antigen ligase KSO_002715 PF02706 Chain length determinant protein KSO_002720 PF00535 Glycosyl transferase family 2 KSO_002730 PF00953 Glycosyl transferase family 4 KSO_002735 PF03816 Cell envelope-related transcriptional attenuator domain KSO_002740 PF01205 Uncharacterized protein family UPF0029 KSO_002740 PF09186 Domain of unknown function (DUF1949) KSO_002745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_002745 PF05384 Sensor protein DegS KSO_002745 PF07730 Histidine kinase KSO_002750 PF00072 Response regulator receiver domain KSO_002750 PF00196 Bacterial regulatory proteins, luxR family KSO_002755 PF02645 Uncharacterised protein, DegV family COG1307 KSO_002760 PF04851 Type III restriction enzyme, res subunit KSO_002760 PF00271 Helicase conserved C-terminal domain KSO_002765 PF10719 Late competence development protein ComFB KSO_002780 PF04316 Anti-sigma-28 factor, FlgM KSO_002785 PF05130 FlgN protein KSO_002790 PF00460 Flagella basal body rod protein KSO_002790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KSO_002795 PF00669 Bacterial flagellin N-terminal helical region KSO_002795 PF00700 Bacterial flagellin C-terminal helical region KSO_002805 PF02623 FliW protein KSO_002810 PF02599 Global regulator protein family KSO_002815 PF00669 Bacterial flagellin N-terminal helical region KSO_002815 PF00700 Bacterial flagellin C-terminal helical region KSO_002820 PF07196 Flagellin hook IN motif KSO_002820 PF07195 Flagellar hook-associated protein 2 C-terminus KSO_002820 PF02465 Flagellar hook-associated protein 2 N-terminus KSO_002825 PF02561 Flagellar protein FliS KSO_002840 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KSO_002840 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KSO_002845 PF07517 SecA DEAD-like domain KSO_002845 PF07516 SecA Wing and Scaffold domain KSO_002845 PF02810 SEC-C motif KSO_002845 PF01043 SecA preprotein cross-linking domain KSO_002850 PF00472 RF-1 domain KSO_002850 PF03462 PCRF domain KSO_002855 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KSO_002855 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KSO_002860 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KSO_002865 PF00005 ABC transporter KSO_002870 PF18075 FtsX extracellular domain KSO_002870 PF02687 FtsX-like permease family KSO_002875 PF13229 Right handed beta helix region KSO_002880 PF01471 Putative peptidoglycan binding domain KSO_002880 PF17820 PDZ domain KSO_002880 PF03572 Peptidase family S41 KSO_002885 PF17423 Swarming motility protein KSO_002890 PF17820 PDZ domain KSO_002910 PF00872 Transposase, Mutator family KSO_002920 PF07690 Major Facilitator Superfamily KSO_002925 PF00440 Bacterial regulatory proteins, tetR family KSO_002930 PF00391 PEP-utilising enzyme, mobile domain KSO_002930 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KSO_002935 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) KSO_002940 PF17757 UvrB interaction domain KSO_002940 PF12344 Ultra-violet resistance protein B KSO_002940 PF02151 UvrB/uvrC motif KSO_002940 PF04851 Type III restriction enzyme, res subunit KSO_002940 PF00271 Helicase conserved C-terminal domain KSO_002945 PF17760 UvrA interaction domain KSO_002945 PF17755 UvrA DNA-binding domain KSO_002945 PF00005 ABC transporter KSO_002960 PF13349 Putative adhesin KSO_002965 PF04024 PspC domain KSO_002970 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KSO_002975 PF00149 Calcineurin-like phosphoesterase KSO_002980 PF00440 Bacterial regulatory proteins, tetR family KSO_002990 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KSO_002995 PF01979 Amidohydrolase family KSO_003000 PF07475 HPr Serine kinase C-terminal domain KSO_003000 PF02603 HPr Serine kinase N terminus KSO_003005 PF01790 Prolipoprotein diacylglyceryl transferase KSO_003010 PF13419 Haloacid dehalogenase-like hydrolase KSO_003015 PF14602 Hexapeptide repeat of succinyl-transferase KSO_003020 PF13529 Peptidase_C39 like family KSO_003025 PF13393 Histidyl-tRNA synthetase KSO_003030 PF01634 ATP phosphoribosyltransferase KSO_003035 PF00815 Histidinol dehydrogenase KSO_003040 PF00475 Imidazoleglycerol-phosphate dehydratase KSO_003045 PF00117 Glutamine amidotransferase class-I KSO_003050 PF00977 Histidine biosynthesis protein KSO_003055 PF00977 Histidine biosynthesis protein KSO_003060 PF01502 Phosphoribosyl-AMP cyclohydrolase KSO_003060 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KSO_003065 PF00005 ABC transporter KSO_003065 PF00664 ABC transporter transmembrane region KSO_003075 PF00486 Transcriptional regulatory protein, C terminal KSO_003075 PF00072 Response regulator receiver domain KSO_003080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_003080 PF00672 HAMP domain KSO_003080 PF00512 His Kinase A (phospho-acceptor) domain KSO_003080 PF18698 Histidine kinase sensor domain KSO_003080 PF00989 PAS fold KSO_003090 PF00877 NlpC/P60 family KSO_003095 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSO_003105 PF00293 NUDIX domain KSO_003110 PF03668 P-loop ATPase protein family KSO_003115 PF01933 Uncharacterised protein family UPF0052 KSO_003120 PF10298 WhiA N-terminal LAGLIDADG-like domain KSO_003120 PF02650 WhiA C-terminal HTH domain KSO_003120 PF14527 WhiA LAGLIDADG-like domain KSO_003125 PF00381 PTS HPr component phosphorylation site KSO_003130 PF00797 N-acetyltransferase KSO_003135 PF00545 ribonuclease KSO_003140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KSO_003140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KSO_003145 PF00484 Carbonic anhydrase KSO_003150 PF01740 STAS domain KSO_003150 PF00916 Sulfate permease family KSO_003155 PF03819 MazG nucleotide pyrophosphohydrolase domain KSO_003160 PF03641 Possible lysine decarboxylase KSO_003165 PF00083 Sugar (and other) transporter KSO_003170 PF04303 PrpF protein KSO_003175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_003175 PF03466 LysR substrate binding domain KSO_003180 PF00574 Clp protease KSO_003185 PF00356 Bacterial regulatory proteins, lacI family KSO_003190 PF01306 LacY proton/sugar symporter KSO_003195 PF08244 Glycosyl hydrolases family 32 C terminal KSO_003195 PF00251 Glycosyl hydrolases family 32 N-terminal domain KSO_003215 PF08769 Sporulation initiation factor Spo0A C terminal KSO_003215 PF00072 Response regulator receiver domain KSO_003250 PF05870 Phenolic acid decarboxylase (PAD) KSO_003255 PF00583 Acetyltransferase (GNAT) family KSO_003265 PF01872 RibD C-terminal domain KSO_003275 PF00135 Carboxylesterase family KSO_003280 PF01381 Helix-turn-helix KSO_003280 PF08671 Anti-repressor SinI KSO_003285 PF02706 Chain length determinant protein KSO_003290 PF13614 AAA domain KSO_003295 PF02719 Polysaccharide biosynthesis protein KSO_003300 PF00534 Glycosyl transferases group 1 KSO_003300 PF13439 Glycosyltransferase Family 4 KSO_003305 PF00535 Glycosyl transferase family 2 KSO_003310 PF00534 Glycosyl transferases group 1 KSO_003310 PF13439 Glycosyltransferase Family 4 KSO_003320 PF00535 Glycosyl transferase family 2 KSO_003325 PF04230 Polysaccharide pyruvyl transferase KSO_003330 PF00535 Glycosyl transferase family 2 KSO_003335 PF01943 Polysaccharide biosynthesis protein KSO_003335 PF14667 Polysaccharide biosynthesis C-terminal domain KSO_003340 PF02397 Bacterial sugar transferase KSO_003345 PF17836 PglD N-terminal domain KSO_003345 PF00132 Bacterial transferase hexapeptide (six repeats) KSO_003350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KSO_003355 PF04230 Polysaccharide pyruvyl transferase KSO_003360 PF09628 YvfG protein KSO_003365 PF04963 Sigma-54 factor, core binding domain KSO_003365 PF04552 Sigma-54, DNA binding domain KSO_003365 PF00309 Sigma-54 factor, Activator interacting domain (AID) KSO_003370 PF02652 L-lactate permease KSO_003375 PF07729 FCD domain KSO_003375 PF00392 Bacterial regulatory proteins, gntR family KSO_003380 PF00155 Aminotransferase class I and II KSO_003385 PF02754 Cysteine-rich domain KSO_003390 PF02589 LUD domain KSO_003390 PF13183 4Fe-4S dicluster domain KSO_003390 PF11870 Domain of unknown function (DUF3390) KSO_003395 PF02589 LUD domain KSO_003400 PF02447 GntP family permease KSO_003405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KSO_003405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KSO_003410 PF01380 SIS domain KSO_003410 PF01418 Helix-turn-helix domain, rpiR family KSO_003425 PF00356 Bacterial regulatory proteins, lacI family KSO_003435 PF00324 Amino acid permease KSO_003440 PF00892 EamA-like transporter family KSO_003445 PF03466 LysR substrate binding domain KSO_003445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_003455 PF00296 Luciferase-like monooxygenase KSO_003460 PF00392 Bacterial regulatory proteins, gntR family KSO_003465 PF00083 Sugar (and other) transporter KSO_003470 PF04198 Putative sugar-binding domain KSO_003475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KSO_003475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KSO_003485 PF00162 Phosphoglycerate kinase KSO_003490 PF00121 Triosephosphate isomerase KSO_003495 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KSO_003495 PF01676 Metalloenzyme superfamily KSO_003500 PF00113 Enolase, C-terminal TIM barrel domain KSO_003500 PF03952 Enolase, N-terminal domain KSO_003505 PF04389 Peptidase family M28 KSO_003505 PF02225 PA domain KSO_003510 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KSO_003510 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KSO_003510 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KSO_003515 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KSO_003520 PF01370 NAD dependent epimerase/dehydratase family KSO_003525 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KSO_003540 PF02585 GlcNAc-PI de-N-acetylase KSO_003555 PF00583 Acetyltransferase (GNAT) family KSO_003560 PF13240 zinc-ribbon domain KSO_003575 PF01914 MarC family integral membrane protein KSO_003580 PF12802 MarR family KSO_003585 PF00005 ABC transporter KSO_003585 PF00571 CBS domain KSO_003590 PF00528 Binding-protein-dependent transport system inner membrane component KSO_003595 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KSO_003600 PF00528 Binding-protein-dependent transport system inner membrane component KSO_003605 PF12802 MarR family KSO_003610 PF00571 CBS domain KSO_003610 PF00005 ABC transporter KSO_003615 PF00528 Binding-protein-dependent transport system inner membrane component KSO_003620 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KSO_003625 PF00528 Binding-protein-dependent transport system inner membrane component KSO_003630 PF00005 ABC transporter KSO_003645 PF00486 Transcriptional regulatory protein, C terminal KSO_003645 PF00072 Response regulator receiver domain KSO_003650 PF00512 His Kinase A (phospho-acceptor) domain KSO_003650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_003655 PF01638 HxlR-like helix-turn-helix KSO_003670 PF01381 Helix-turn-helix KSO_003675 PF03840 Preprotein translocase SecG subunit KSO_003680 PF12146 Serine aminopeptidase, S33 KSO_003685 PF17876 Cold shock domain KSO_003685 PF08206 Ribonuclease B OB domain KSO_003685 PF00575 S1 RNA binding domain KSO_003685 PF00773 RNB domain KSO_003695 PF01668 SmpB protein KSO_003710 PF01337 Barstar (barnase inhibitor) KSO_003715 PF00106 short chain dehydrogenase KSO_003720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_003720 PF03466 LysR substrate binding domain KSO_003725 PF00583 Acetyltransferase (GNAT) family KSO_003730 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSO_003735 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSO_003740 PF00528 Binding-protein-dependent transport system inner membrane component KSO_003745 PF00528 Binding-protein-dependent transport system inner membrane component KSO_003750 PF00005 ABC transporter KSO_003755 PF00296 Luciferase-like monooxygenase KSO_003760 PF00462 Glutaredoxin KSO_003765 PF00296 Luciferase-like monooxygenase KSO_003780 PF07690 Major Facilitator Superfamily KSO_003790 PF02525 Flavodoxin-like fold KSO_003795 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KSO_003795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KSO_003800 PF02583 Metal-sensitive transcriptional repressor KSO_003805 PF00403 Heavy-metal-associated domain KSO_003810 PF00403 Heavy-metal-associated domain KSO_003815 PF00403 Heavy-metal-associated domain KSO_003820 PF13462 Thioredoxin KSO_003825 PF02600 Disulfide bond formation protein DsbB KSO_003835 PF03458 UPF0126 domain KSO_003840 PF13538 UvrD-like helicase C-terminal domain KSO_003845 PF00175 Oxidoreductase NAD-binding domain KSO_003845 PF00258 Flavodoxin KSO_003845 PF00667 FAD binding domain KSO_003850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KSO_003850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KSO_003860 PF00999 Sodium/hydrogen exchanger family KSO_003870 PF00248 Aldo/keto reductase family KSO_003885 PF00005 ABC transporter KSO_003890 PF07730 Histidine kinase KSO_003890 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KSO_003890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_003890 PF00672 HAMP domain KSO_003895 PF00072 Response regulator receiver domain KSO_003895 PF00196 Bacterial regulatory proteins, luxR family KSO_003900 PF00528 Binding-protein-dependent transport system inner membrane component KSO_003910 PF12727 PBP superfamily domain KSO_003910 PF12728 Helix-turn-helix domain KSO_003915 PF00884 Sulfatase KSO_003920 PF04307 LexA-binding, inner membrane-associated putative hydrolase KSO_003925 PF09575 Small spore protein J (Spore_SspJ) KSO_003930 PF13520 Amino acid permease KSO_003935 PF04072 Leucine carboxyl methyltransferase KSO_003940 PF01497 Periplasmic binding protein KSO_003945 PF01032 FecCD transport family KSO_003950 PF01032 FecCD transport family KSO_003955 PF00005 ABC transporter KSO_003960 PF14184 Regulatory protein YrvL KSO_003965 PF00190 Cupin KSO_003970 PF12841 YvrJ protein family KSO_003975 PF04545 Sigma-70, region 4 KSO_003985 PF00486 Transcriptional regulatory protein, C terminal KSO_003985 PF00072 Response regulator receiver domain KSO_003990 PF00512 His Kinase A (phospho-acceptor) domain KSO_003990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_003995 PF08450 SMP-30/Gluconolactonase/LRE-like region KSO_004000 PF00106 short chain dehydrogenase KSO_004005 PF01497 Periplasmic binding protein KSO_004010 PF01032 FecCD transport family KSO_004015 PF00005 ABC transporter KSO_004020 PF01923 Cobalamin adenosyltransferase KSO_004025 PF07690 Major Facilitator Superfamily KSO_004035 PF04012 PspA/IM30 family KSO_004040 PF13349 Putative adhesin KSO_004045 PF09922 Cell wall-active antibiotics response 4TMS YvqF KSO_004050 PF00672 HAMP domain KSO_004050 PF07730 Histidine kinase KSO_004050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_004055 PF00196 Bacterial regulatory proteins, luxR family KSO_004055 PF00072 Response regulator receiver domain KSO_004060 PF05504 Spore germination B3/ GerAC like, C-terminal KSO_004065 PF03845 Spore germination protein KSO_004070 PF03323 Bacillus/Clostridium GerA spore germination protein KSO_004075 PF13113 Protein of unknown function (DUF3970) KSO_004080 PF10415 Fumarase C C-terminus KSO_004080 PF00206 Lyase KSO_004085 PF00440 Bacterial regulatory proteins, tetR family KSO_004095 PF00512 His Kinase A (phospho-acceptor) domain KSO_004095 PF00672 HAMP domain KSO_004095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_004100 PF00072 Response regulator receiver domain KSO_004100 PF00486 Transcriptional regulatory protein, C terminal KSO_004105 PF13180 PDZ domain KSO_004110 PF00210 Ferritin-like domain KSO_004115 PF00106 short chain dehydrogenase KSO_004125 PF14039 YusW-like protein KSO_004130 PF00005 ABC transporter KSO_004135 PF10835 Protein of unknown function (DUF2573) KSO_004145 PF06314 Acetoacetate decarboxylase (ADC) KSO_004150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_004150 PF03466 LysR substrate binding domain KSO_004155 PF07690 Major Facilitator Superfamily KSO_004160 PF01047 MarR family KSO_004165 PF07875 Coat F domain KSO_004175 PF01619 Proline dehydrogenase KSO_004180 PF14115 YuzL-like protein KSO_004185 PF00378 Enoyl-CoA hydratase/isomerase KSO_004185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KSO_004185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KSO_004190 PF02803 Thiolase, C-terminal domain KSO_004190 PF00108 Thiolase, N-terminal domain KSO_004195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSO_004195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSO_004195 PF02770 Acyl-CoA dehydrogenase, middle domain KSO_004200 PF03960 ArsC family KSO_004205 PF01597 Glycine cleavage H-protein KSO_004210 PF10830 Protein of unknown function (DUF2553) KSO_004215 PF01751 Toprim domain KSO_004220 PF00085 Thioredoxin KSO_004225 PF02036 SCP-2 sterol transfer family KSO_004235 PF00005 ABC transporter KSO_004235 PF09383 NIL domain KSO_004240 PF00528 Binding-protein-dependent transport system inner membrane component KSO_004245 PF03180 NLPA lipoprotein KSO_004250 PF02627 Carboxymuconolactone decarboxylase family KSO_004260 PF00005 ABC transporter KSO_004265 PF01458 Uncharacterized protein family (UPF0051) KSO_004270 PF00266 Aminotransferase class-V KSO_004275 PF01592 NifU-like N terminal domain KSO_004280 PF01458 Uncharacterized protein family (UPF0051) KSO_004285 PF01374 Glycosyl hydrolase family 46 KSO_004300 PF01266 FAD dependent oxidoreductase KSO_004305 PF01541 GIY-YIG catalytic domain KSO_004310 PF07853 Protein of unknown function (DUF1648) KSO_004315 PF13411 MerR HTH family regulatory protein KSO_004320 PF01380 SIS domain KSO_004325 PF01547 Bacterial extracellular solute-binding protein KSO_004330 PF00528 Binding-protein-dependent transport system inner membrane component KSO_004335 PF00528 Binding-protein-dependent transport system inner membrane component KSO_004340 PF00294 pfkB family carbohydrate kinase KSO_004345 PF00392 Bacterial regulatory proteins, gntR family KSO_004345 PF07702 UTRA domain KSO_004350 PF17912 MalK OB fold domain KSO_004350 PF03459 TOBE domain KSO_004350 PF00005 ABC transporter KSO_004355 PF04231 Endonuclease I KSO_004360 PF01546 Peptidase family M20/M25/M40 KSO_004365 PF00266 Aminotransferase class-V KSO_004370 PF07690 Major Facilitator Superfamily KSO_004380 PF07905 Purine catabolism regulatory protein-like family KSO_004380 PF13556 PucR C-terminal helix-turn-helix domain KSO_004380 PF17853 GGDEF-like domain KSO_004385 PF01979 Amidohydrolase family KSO_004395 PF01904 Protein of unknown function DUF72 KSO_004400 PF01925 Sulfite exporter TauE/SafE KSO_004405 PF02872 5'-nucleotidase, C-terminal domain KSO_004410 PF09560 Sporulation protein YunB (Spo_YunB) KSO_004415 PF01551 Peptidase family M23 KSO_004420 PF04055 Radical SAM superfamily KSO_004420 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KSO_004425 PF06265 Protein of unknown function (DUF1027) KSO_004430 PF01934 Protein of unknown function DUF86 KSO_004435 PF13344 Haloacid dehalogenase-like hydrolase KSO_004440 PF04608 Phosphatidylglycerophosphatase A KSO_004450 PF03447 Homoserine dehydrogenase, NAD binding domain KSO_004450 PF00742 Homoserine dehydrogenase KSO_004450 PF01842 ACT domain KSO_004455 PF00291 Pyridoxal-phosphate dependent enzyme KSO_004460 PF08544 GHMP kinases C terminal KSO_004460 PF00288 GHMP kinases N terminal domain KSO_004465 PF00326 Prolyl oligopeptidase family KSO_004465 PF07676 WD40-like Beta Propeller Repeat KSO_004470 PF01106 NifU-like domain KSO_004475 PF07315 Protein of unknown function (DUF1462) KSO_004480 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSO_004485 PF07293 Protein of unknown function (DUF1450) KSO_004490 PF01773 Na+ dependent nucleoside transporter N-terminus KSO_004490 PF07662 Na+ dependent nucleoside transporter C-terminus KSO_004495 PF01678 Diaminopimelate epimerase KSO_004500 PF01521 Iron-sulphur cluster biosynthesis KSO_004505 PF00106 short chain dehydrogenase KSO_004535 PF00005 ABC transporter KSO_004550 PF00478 IMP dehydrogenase / GMP reductase domain KSO_004560 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSO_004565 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSO_004575 PF17302 Family of unknown function (DUF5351) KSO_004580 PF14068 Putative membrane protein KSO_004585 PF06725 3D domain KSO_004590 PF02681 Divergent PAP2 family KSO_004595 PF00883 Cytosol aminopeptidase family, catalytic domain KSO_004595 PF02789 Cytosol aminopeptidase family, N-terminal domain KSO_004600 PF13726 Na+-H+ antiporter family KSO_004600 PF03553 Na+/H+ antiporter family KSO_004605 PF02632 BioY family KSO_004610 PF00174 Oxidoreductase molybdopterin binding domain KSO_004615 PF00756 Putative esterase KSO_004620 PF00106 short chain dehydrogenase KSO_004625 PF00425 chorismate binding enzyme KSO_004630 PF13193 AMP-binding enzyme C-terminal domain KSO_004630 PF00501 AMP-binding enzyme KSO_004635 PF00550 Phosphopantetheine attachment site KSO_004635 PF00857 Isochorismatase family KSO_004640 PF13193 AMP-binding enzyme C-terminal domain KSO_004640 PF00668 Condensation domain KSO_004640 PF00501 AMP-binding enzyme KSO_004640 PF00550 Phosphopantetheine attachment site KSO_004640 PF00975 Thioesterase domain KSO_004645 PF03621 MbtH-like protein KSO_004650 PF10042 Uncharacterized conserved protein (DUF2278) KSO_004655 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KSO_004655 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KSO_004660 PF13556 PucR C-terminal helix-turn-helix domain KSO_004660 PF17853 GGDEF-like domain KSO_004660 PF06018 CodY GAF-like domain KSO_004665 PF06013 Proteins of 100 residues with WXG KSO_004670 PF08817 WXG100 protein secretion system (Wss), protein YukD KSO_004675 PF10140 WXG100 protein secretion system (Wss), protein YukC KSO_004680 PF01580 FtsK/SpoIIIE family KSO_004680 PF12538 DNA transporter KSO_004690 PF17355 Family of unknown function (DUF5383) KSO_004695 PF00106 short chain dehydrogenase KSO_004700 PF01966 HD domain KSO_004705 PF10842 Protein of unknown function (DUF2642) KSO_004710 PF01594 AI-2E family transporter KSO_004715 PF10676 Spore germination protein gerPA/gerPF KSO_004720 PF14166 YueH-like protein KSO_004725 PF07997 Protein of unknown function (DUF1694) KSO_004730 PF00857 Isochorismatase family KSO_004735 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KSO_004735 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KSO_004735 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KSO_004740 PF08668 HDOD domain KSO_004740 PF00563 EAL domain KSO_004755 PF08181 DegQ (SacQ) family KSO_004760 PF00348 Polyprenyl synthetase KSO_004765 PF05952 Bacillus competence pheromone ComX KSO_004770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_004770 PF07730 Histidine kinase KSO_004775 PF00072 Response regulator receiver domain KSO_004775 PF00196 Bacterial regulatory proteins, luxR family KSO_004780 PF03061 Thioesterase superfamily KSO_004785 PF03334 Na+/H+ antiporter subunit KSO_004790 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KSO_004795 PF01899 Na+/H+ ion antiporter subunit KSO_004800 PF00361 Proton-conducting membrane transporter KSO_004805 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KSO_004810 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KSO_004815 PF00361 Proton-conducting membrane transporter KSO_004815 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KSO_004815 PF13244 Domain of unknown function (DUF4040) KSO_004850 PF00072 Response regulator receiver domain KSO_004855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_004855 PF17203 Single cache domain 3 KSO_004855 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KSO_004855 PF00989 PAS fold KSO_004860 PF17328 Family of unknown function (DUF5366) KSO_004865 PF04134 Protein of unknown function, DUF393 KSO_004870 PF00905 Penicillin binding protein transpeptidase domain KSO_004870 PF00912 Transglycosylase KSO_004875 PF07690 Major Facilitator Superfamily KSO_004880 PF00929 Exonuclease KSO_004885 PF08810 Kinase associated protein B KSO_004890 PF00512 His Kinase A (phospho-acceptor) domain KSO_004890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_004895 PF00155 Aminotransferase class I and II KSO_004900 PF08958 Domain of unknown function (DUF1871) KSO_004905 PF08386 TAP-like protein KSO_004905 PF00561 alpha/beta hydrolase fold KSO_004910 PF01037 Lrp/AsnC ligand binding domain KSO_004915 PF00155 Aminotransferase class I and II KSO_004920 PF00575 S1 RNA binding domain KSO_004925 PF04070 Domain of unknown function (DUF378) KSO_004930 PF00465 Iron-containing alcohol dehydrogenase KSO_004935 PF00465 Iron-containing alcohol dehydrogenase KSO_004940 PF00857 Isochorismatase family KSO_004950 PF00342 Phosphoglucose isomerase KSO_004960 PF08868 YugN-like family KSO_004965 PF02254 TrkA-N domain KSO_004965 PF07885 Ion channel KSO_004970 PF11458 Membrane-integrating protein Mistic KSO_004980 PF04298 Putative neutral zinc metallopeptidase KSO_004985 PF03471 Transporter associated domain KSO_004985 PF01595 Cyclin M transmembrane N-terminal domain KSO_004985 PF00571 CBS domain KSO_004990 PF00128 Alpha amylase, catalytic domain KSO_004990 PF16657 Maltogenic Amylase, C-terminal domain KSO_004995 PF01894 Uncharacterised protein family UPF0047 KSO_005000 PF03060 Nitronate monooxygenase KSO_005015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSO_005015 PF00672 HAMP domain KSO_005015 PF02743 Cache domain KSO_005020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSO_005020 PF00672 HAMP domain KSO_005020 PF02743 Cache domain KSO_005025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSO_005025 PF00672 HAMP domain KSO_005025 PF02743 Cache domain KSO_005030 PF00672 HAMP domain KSO_005030 PF02743 Cache domain KSO_005030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSO_005035 PF01965 DJ-1/PfpI family KSO_005040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KSO_005040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KSO_005045 PF01594 AI-2E family transporter KSO_005050 PF02673 Bacitracin resistance protein BacA KSO_005065 PF18801 response regulator aspartate phosphatase H, N terminal KSO_005065 PF13176 Tetratricopeptide repeat KSO_005095 PF00970 Oxidoreductase FAD-binding domain KSO_005095 PF00175 Oxidoreductase NAD-binding domain KSO_005095 PF00042 Globin KSO_005100 PF13457 GW (Gly-Tryp) dipeptide domain KSO_005100 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KSO_005105 PF02080 TrkA-C domain KSO_005105 PF02254 TrkA-N domain KSO_005110 PF17735 Biofilm surface layer A KSO_005125 PF00465 Iron-containing alcohol dehydrogenase KSO_005135 PF12867 DinB superfamily KSO_005145 PF15975 Flotillin KSO_005145 PF01145 SPFH domain / Band 7 family KSO_005150 PF09515 Thiamine transporter protein (Thia_YuaJ) KSO_005155 PF03073 TspO/MBR family KSO_005160 PF01258 Prokaryotic dksA/traR C4-type zinc finger KSO_005165 PF00425 chorismate binding enzyme KSO_005170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KSO_005170 PF16582 Middle domain of thiamine pyrophosphate KSO_005170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KSO_005175 PF00561 alpha/beta hydrolase fold KSO_005180 PF00378 Enoyl-CoA hydratase/isomerase KSO_005185 PF00501 AMP-binding enzyme KSO_005185 PF13193 AMP-binding enzyme C-terminal domain KSO_005190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KSO_005190 PF13378 Enolase C-terminal domain-like KSO_005195 PF07561 Domain of Unknown Function (DUF1540) KSO_005200 PF02322 Cytochrome bd terminal oxidase subunit II KSO_005205 PF01654 Cytochrome bd terminal oxidase subunit I KSO_005210 PF01197 Ribosomal protein L31 KSO_005215 PF00484 Carbonic anhydrase KSO_005220 PF01809 Putative membrane protein insertion efficiency factor KSO_005225 PF02664 S-Ribosylhomocysteinase (LuxS) KSO_005230 PF13115 YtkA-like KSO_005240 PF00210 Ferritin-like domain KSO_005245 PF05105 Bacteriophage holin family KSO_005250 PF00293 NUDIX domain KSO_005255 PF00528 Binding-protein-dependent transport system inner membrane component KSO_005260 PF00005 ABC transporter KSO_005270 PF00326 Prolyl oligopeptidase family KSO_005275 PF10763 Protein of unknown function (DUF2584) KSO_005280 PF01293 Phosphoenolpyruvate carboxykinase KSO_005290 PF00438 S-adenosylmethionine synthetase, N-terminal domain KSO_005290 PF02772 S-adenosylmethionine synthetase, central domain KSO_005290 PF02773 S-adenosylmethionine synthetase, C-terminal domain KSO_005295 PF00733 Asparagine synthase KSO_005295 PF13537 Glutamine amidotransferase domain KSO_005300 PF00324 Amino acid permease KSO_005305 PF00132 Bacterial transferase hexapeptide (six repeats) KSO_005310 PF12146 Serine aminopeptidase, S33 KSO_005315 PF10776 Protein of unknown function (DUF2600) KSO_005320 PF03009 Glycerophosphoryl diester phosphodiesterase family KSO_005330 PF06962 Putative rRNA methylase KSO_005335 PF04055 Radical SAM superfamily KSO_005335 PF16199 Radical_SAM C-terminal domain KSO_005340 PF10732 Protein of unknown function (DUF2524) KSO_005350 PF00392 Bacterial regulatory proteins, gntR family KSO_005355 PF00005 ABC transporter KSO_005375 PF00005 ABC transporter KSO_005380 PF02687 FtsX-like permease family KSO_005380 PF12704 MacB-like periplasmic core domain KSO_005385 PF00072 Response regulator receiver domain KSO_005385 PF00486 Transcriptional regulatory protein, C terminal KSO_005390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_005395 PF00005 ABC transporter KSO_005400 PF02687 FtsX-like permease family KSO_005405 PF09529 Integral membrane protein (intg_mem_TP0381) KSO_005410 PF07690 Major Facilitator Superfamily KSO_005415 PF13426 PAS domain KSO_005415 PF01740 STAS domain KSO_005420 PF14074 Protein of unknown function (DUF4257) KSO_005425 PF08264 Anticodon-binding domain of tRNA KSO_005425 PF13603 Leucyl-tRNA synthetase, Domain 2 KSO_005425 PF00133 tRNA synthetases class I (I, L, M and V) KSO_005425 PF09334 tRNA synthetases class I (M) KSO_005430 PF00581 Rhodanese-like domain KSO_005440 PF02056 Family 4 glycosyl hydrolase KSO_005440 PF11975 Family 4 glycosyl hydrolase C-terminal domain KSO_005465 PF10957 Sporulation protein Cse60 KSO_005470 PF02028 BCCT, betaine/carnitine/choline family transporter KSO_005480 PF14667 Polysaccharide biosynthesis C-terminal domain KSO_005480 PF01943 Polysaccharide biosynthesis protein KSO_005485 PF00849 RNA pseudouridylate synthase KSO_005485 PF01479 S4 domain KSO_005490 PF08220 DeoR-like helix-turn-helix domain KSO_005495 PF00005 ABC transporter KSO_005500 PF05975 Bacterial ABC transporter protein EcsB KSO_005505 PF00860 Permease family KSO_005510 PF01546 Peptidase family M20/M25/M40 KSO_005515 PF00291 Pyridoxal-phosphate dependent enzyme KSO_005530 PF00781 Diacylglycerol kinase catalytic domain KSO_005535 PF01636 Phosphotransferase enzyme family KSO_005540 PF14165 YtzH-like protein KSO_005545 PF02390 Putative methyltransferase KSO_005550 PF00753 Metallo-beta-lactamase superfamily KSO_005555 PF03949 Malic enzyme, NAD binding domain KSO_005555 PF00390 Malic enzyme, N-terminal domain KSO_005560 PF03413 Peptidase propeptide and YPEB domain KSO_005565 PF05343 M42 glutamyl aminopeptidase KSO_005570 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ KSO_005575 PF00085 Thioredoxin KSO_005580 PF07285 Protein of unknown function (DUF1444) KSO_005585 PF01588 Putative tRNA binding domain KSO_005585 PF14794 Domain of unknown function (DUF4479) KSO_005590 PF01580 FtsK/SpoIIIE family KSO_005590 PF09397 Ftsk gamma domain KSO_005590 PF17854 FtsK alpha domain KSO_005595 PF01225 Mur ligase family, catalytic domain KSO_005595 PF02875 Mur ligase family, glutamate ligase domain KSO_005595 PF08245 Mur ligase middle domain KSO_005600 PF06103 Bacterial protein of unknown function (DUF948) KSO_005605 PF12732 YtxH-like protein KSO_005610 PF11009 Protein of unknown function (DUF2847) KSO_005615 PF01817 Chorismate mutase type II KSO_005615 PF00793 DAHP synthetase I family KSO_005620 PF00356 Bacterial regulatory proteins, lacI family KSO_005625 PF01618 MotA/TolQ/ExbB proton channel family KSO_005630 PF00691 OmpA family KSO_005630 PF13677 Membrane MotB of proton-channel complex MotA/MotB KSO_005635 PF00850 Histone deacetylase domain KSO_005640 PF00571 CBS domain KSO_005645 PF00583 Acetyltransferase (GNAT) family KSO_005650 PF00501 AMP-binding enzyme KSO_005650 PF13193 AMP-binding enzyme C-terminal domain KSO_005655 PF00579 tRNA synthetases class I (W and Y) KSO_005655 PF01479 S4 domain KSO_005675 PF11495 Archaeal transcriptional regulator TrmB KSO_005675 PF01978 Sugar-specific transcriptional regulator TrmB KSO_005680 PF16916 Dimerisation domain of Zinc Transporter KSO_005680 PF01545 Cation efflux family KSO_005700 PF01965 DJ-1/PfpI family KSO_005710 PF00175 Oxidoreductase NAD-binding domain KSO_005710 PF00042 Globin KSO_005710 PF00970 Oxidoreductase FAD-binding domain KSO_005715 PF09346 SMI1 / KNR4 family (SUKH-1) KSO_005720 PF00171 Aldehyde dehydrogenase family KSO_005725 PF00163 Ribosomal protein S4/S9 N-terminal domain KSO_005725 PF01479 S4 domain KSO_005735 PF00990 Diguanylate cyclase, GGDEF domain KSO_005740 PF13185 GAF domain KSO_005745 PF00440 Bacterial regulatory proteins, tetR family KSO_005750 PF02811 PHP domain KSO_005755 PF06160 Septation ring formation regulator, EzrA KSO_005760 PF05525 Branched-chain amino acid transport protein KSO_005765 PF00266 Aminotransferase class-V KSO_005770 PF02568 Thiamine biosynthesis protein (ThiI) KSO_005770 PF02926 THUMP domain KSO_005775 PF00269 Small, acid-soluble spore proteins, alpha/beta type KSO_005780 PF13193 AMP-binding enzyme C-terminal domain KSO_005780 PF00501 AMP-binding enzyme KSO_005785 PF07969 Amidohydrolase family KSO_005790 PF01513 ATP-NAD kinase KSO_005795 PF01343 Peptidase family S49 KSO_005800 PF06271 RDD family KSO_005805 PF11167 Protein of unknown function (DUF2953) KSO_005810 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KSO_005815 PF08534 Redoxin KSO_005820 PF02384 N-6 DNA Methylase KSO_005825 PF00871 Acetokinase family KSO_005830 PF00994 Probable molybdopterin binding domain KSO_005835 PF00764 Arginosuccinate synthase KSO_005840 PF00206 Lyase KSO_005840 PF14698 Argininosuccinate lyase C-terminal KSO_005860 PF03061 Thioesterase superfamily KSO_005860 PF00571 CBS domain KSO_005860 PF00392 Bacterial regulatory proteins, gntR family KSO_005860 PF07085 DRTGG domain KSO_005865 PF14007 YtpI-like protein KSO_005870 PF02272 DHHA1 domain KSO_005870 PF01368 DHH family KSO_005885 PF14034 Sporulation protein YtrH KSO_005890 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KSO_005890 PF14579 Helix-hairpin-helix motif KSO_005890 PF02811 PHP domain KSO_005890 PF07733 Bacterial DNA polymerase III alpha NTPase domain KSO_005890 PF01336 OB-fold nucleic acid binding domain KSO_005895 PF00390 Malic enzyme, N-terminal domain KSO_005895 PF03949 Malic enzyme, NAD binding domain KSO_005900 PF01039 Carboxyl transferase domain KSO_005900 PF17848 Acetyl-coA carboxylase zinc finger domain KSO_005905 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KSO_005910 PF00365 Phosphofructokinase KSO_005915 PF02887 Pyruvate kinase, alpha/beta domain KSO_005915 PF00224 Pyruvate kinase, barrel domain KSO_005915 PF00391 PEP-utilising enzyme, mobile domain KSO_005920 PF04186 FxsA cytoplasmic membrane protein KSO_005925 PF01594 AI-2E family transporter KSO_005930 PF04284 Protein of unknown function (DUF441) KSO_005935 PF11208 Protein of unknown function (DUF2992) KSO_005940 PF00285 Citrate synthase, C-terminal domain KSO_005945 PF00180 Isocitrate/isopropylmalate dehydrogenase KSO_005950 PF00056 lactate/malate dehydrogenase, NAD binding domain KSO_005950 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KSO_005960 PF00486 Transcriptional regulatory protein, C terminal KSO_005960 PF00072 Response regulator receiver domain KSO_005965 PF16736 Single Cache-like KSO_005965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_005965 PF00512 His Kinase A (phospho-acceptor) domain KSO_005965 PF00989 PAS fold KSO_005970 PF00476 DNA polymerase family A KSO_005970 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KSO_005970 PF01367 5'-3' exonuclease, C-terminal SAM fold KSO_005975 PF06827 Zinc finger found in FPG and IleRS KSO_005975 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KSO_005975 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KSO_005980 PF02659 Putative manganese efflux pump KSO_005985 PF01121 Dephospho-CoA kinase KSO_005990 PF00248 Aldo/keto reductase family KSO_005995 PF07690 Major Facilitator Superfamily KSO_006000 PF01638 HxlR-like helix-turn-helix KSO_006005 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KSO_006005 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KSO_006010 PF02675 S-adenosylmethionine decarboxylase KSO_006020 PF03477 ATP cone domain KSO_006025 PF07261 Replication initiation and membrane attachment KSO_006030 PF07319 Primosomal protein DnaI N-terminus KSO_006030 PF01695 IstB-like ATP binding protein KSO_006035 PF09335 SNARE associated Golgi protein KSO_006040 PF08812 YtxC-like family KSO_006045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KSO_006045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KSO_006045 PF03129 Anticodon binding domain KSO_006045 PF02824 TGS domain KSO_006060 PF06580 Histidine kinase KSO_006060 PF07694 5TMR of 5TMR-LYT KSO_006060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_006065 PF00072 Response regulator receiver domain KSO_006065 PF04397 LytTr DNA-binding domain KSO_006070 PF03788 LrgA family KSO_006075 PF04172 LrgB-like family KSO_006080 PF00707 Translation initiation factor IF-3, C-terminal domain KSO_006080 PF05198 Translation initiation factor IF-3, N-terminal domain KSO_006085 PF01632 Ribosomal protein L35 KSO_006090 PF00453 Ribosomal protein L20 KSO_006105 PF05343 M42 glutamyl aminopeptidase KSO_006115 PF04616 Glycosyl hydrolases family 43 KSO_006120 PF02610 L-arabinose isomerase KSO_006120 PF11762 L-arabinose isomerase C-terminal domain KSO_006125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KSO_006125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KSO_006130 PF00596 Class II Aldolase and Adducin N-terminal domain KSO_006135 PF13344 Haloacid dehalogenase-like hydrolase KSO_006140 PF13685 Iron-containing alcohol dehydrogenase KSO_006145 PF01547 Bacterial extracellular solute-binding protein KSO_006150 PF00528 Binding-protein-dependent transport system inner membrane component KSO_006155 PF00528 Binding-protein-dependent transport system inner membrane component KSO_006160 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KSO_006165 PF13722 5TM C-terminal transporter carbon starvation CstA KSO_006165 PF02554 Carbon starvation protein CstA KSO_006170 PF13183 4Fe-4S dicluster domain KSO_006170 PF02754 Cysteine-rich domain KSO_006175 PF01565 FAD binding domain KSO_006175 PF02913 FAD linked oxidases, C-terminal domain KSO_006180 PF13556 PucR C-terminal helix-turn-helix domain KSO_006180 PF05651 Putative sugar diacid recognition KSO_006180 PF17853 GGDEF-like domain KSO_006185 PF14098 Small, acid-soluble spore protein I KSO_006190 PF08032 RNA 2'-O ribose methyltransferase substrate binding KSO_006190 PF00588 SpoU rRNA Methylase family KSO_006195 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KSO_006195 PF01409 tRNA synthetases class II core domain (F) KSO_006200 PF03483 B3/4 domain KSO_006200 PF03484 tRNA synthetase B5 domain KSO_006200 PF03147 Ferredoxin-fold anticodon binding domain KSO_006200 PF01588 Putative tRNA binding domain KSO_006200 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KSO_006205 PF11858 Domain of unknown function (DUF3378) KSO_006205 PF01351 Ribonuclease HII KSO_006210 PF05164 Cell division protein ZapA KSO_006215 PF02674 Colicin V production protein KSO_006220 PF14791 DNA polymerase beta thumb KSO_006220 PF14716 Helix-hairpin-helix domain KSO_006220 PF02811 PHP domain KSO_006225 PF01713 Smr domain KSO_006225 PF00488 MutS domain V KSO_006230 PF03994 Domain of Unknown Function (DUF350) KSO_006235 PF10924 Protein of unknown function (DUF2711) KSO_006240 PF00501 AMP-binding enzyme KSO_006240 PF13193 AMP-binding enzyme C-terminal domain KSO_006245 PF00440 Bacterial regulatory proteins, tetR family KSO_006245 PF08359 YsiA-like protein, C-terminal region KSO_006250 PF00378 Enoyl-CoA hydratase/isomerase KSO_006255 PF01012 Electron transfer flavoprotein domain KSO_006260 PF00766 Electron transfer flavoprotein FAD-binding domain KSO_006260 PF01012 Electron transfer flavoprotein domain KSO_006265 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KSO_006270 PF00085 Thioredoxin KSO_006275 PF01541 GIY-YIG catalytic domain KSO_006275 PF02151 UvrB/uvrC motif KSO_006275 PF08459 UvrC Helix-hairpin-helix N-terminal KSO_006280 PF13840 ACT domain KSO_006280 PF01842 ACT domain KSO_006280 PF00696 Amino acid kinase family KSO_006285 PF10702 Protein of unknown function (DUF2507) KSO_006290 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KSO_006295 PF02910 Fumarate reductase flavoprotein C-term KSO_006295 PF00890 FAD binding domain KSO_006300 PF13085 2Fe-2S iron-sulfur cluster binding domain KSO_006300 PF13183 4Fe-4S dicluster domain KSO_006305 PF03061 Thioesterase superfamily KSO_006310 PF00196 Bacterial regulatory proteins, luxR family KSO_006315 PF01047 MarR family KSO_006320 PF01177 Asp/Glu/Hydantoin racemase KSO_006325 PF10646 Sporulation and spore germination KSO_006330 PF01138 3' exoribonuclease family, domain 1 KSO_006330 PF03725 3' exoribonuclease family, domain 2 KSO_006335 PF01725 Ham1 family KSO_006340 PF12850 Calcineurin-like phosphoesterase superfamily domain KSO_006365 PF00205 Thiamine pyrophosphate enzyme, central domain KSO_006365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KSO_006365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KSO_006370 PF01842 ACT domain KSO_006370 PF10369 Small subunit of acetolactate synthase KSO_006375 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KSO_006375 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KSO_006380 PF08502 LeuA allosteric (dimerisation) domain KSO_006380 PF00682 HMGL-like KSO_006385 PF00180 Isocitrate/isopropylmalate dehydrogenase KSO_006390 PF00330 Aconitase family (aconitate hydratase) KSO_006395 PF00694 Aconitase C-terminal domain KSO_006410 PF05697 Bacterial trigger factor protein (TF) KSO_006410 PF05698 Bacterial trigger factor protein (TF) C-terminus KSO_006410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KSO_006415 PF07724 AAA domain (Cdc48 subfamily) KSO_006415 PF06689 ClpX C4-type zinc finger KSO_006415 PF10431 C-terminal, D2-small domain, of ClpB protein KSO_006420 PF00004 ATPase family associated with various cellular activities (AAA) KSO_006420 PF05362 Lon protease (S16) C-terminal proteolytic domain KSO_006425 PF00004 ATPase family associated with various cellular activities (AAA) KSO_006425 PF02190 ATP-dependent protease La (LON) substrate-binding domain KSO_006425 PF05362 Lon protease (S16) C-terminal proteolytic domain KSO_006430 PF01926 50S ribosome-binding GTPase KSO_006440 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KSO_006440 PF01488 Shikimate / quinate 5-dehydrogenase KSO_006440 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KSO_006445 PF01578 Cytochrome C assembly protein KSO_006450 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KSO_006450 PF03900 Porphobilinogen deaminase, C-terminal domain KSO_006455 PF02602 Uroporphyrinogen-III synthase HemD KSO_006460 PF00490 Delta-aminolevulinic acid dehydratase KSO_006465 PF00202 Aminotransferase class-III KSO_006470 PF01476 LysM domain KSO_006485 PF08264 Anticodon-binding domain of tRNA KSO_006485 PF00133 tRNA synthetases class I (I, L, M and V) KSO_006485 PF10458 Valyl tRNA synthetase tRNA binding arm KSO_006490 PF08245 Mur ligase middle domain KSO_006490 PF02875 Mur ligase family, glutamate ligase domain KSO_006495 PF01478 Type IV leader peptidase family KSO_006495 PF06750 Bacterial Peptidase A24 N-terminal domain KSO_006500 PF05036 Sporulation related domain KSO_006505 PF02545 Maf-like protein KSO_006510 PF04002 RadC-like JAB domain KSO_006520 PF04085 rod shape-determining protein MreC KSO_006525 PF04093 rod shape-determining protein MreD KSO_006530 PF03775 Septum formation inhibitor MinC, C-terminal domain KSO_006535 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KSO_006540 PF01551 Peptidase family M23 KSO_006545 PF02163 Peptidase family M50 KSO_006550 PF00829 Ribosomal prokaryotic L21 protein KSO_006555 PF04327 Cysteine protease Prp KSO_006560 PF01016 Ribosomal L27 protein KSO_006570 PF14682 Sporulation initiation phospho-transferase B, C-terminal KSO_006570 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KSO_006575 PF09269 Domain of unknown function (DUF1967) KSO_006575 PF01018 GTP1/OBG KSO_006575 PF01926 50S ribosome-binding GTPase KSO_006580 PF01842 ACT domain KSO_006585 PF01842 ACT domain KSO_006585 PF00800 Prephenate dehydratase KSO_006590 PF02829 3H domain KSO_006590 PF08279 HTH domain KSO_006595 PF00266 Aminotransferase class-V KSO_006600 PF02910 Fumarate reductase flavoprotein C-term KSO_006600 PF00890 FAD binding domain KSO_006605 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KSO_006605 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KSO_006610 PF02445 Quinolinate synthetase A protein KSO_006615 PF01476 LysM domain KSO_006620 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KSO_006630 PF08955 BofC C-terminal domain KSO_006630 PF08977 Bypass of Forespore C, N terminal KSO_006635 PF01330 RuvA N terminal domain KSO_006635 PF07499 RuvA, C-terminal domain KSO_006640 PF17864 RuvB AAA lid domain KSO_006640 PF05491 RuvB C-terminal winged helix domain KSO_006640 PF05496 Holliday junction DNA helicase RuvB P-loop domain KSO_006645 PF11146 Protein of unknown function (DUF2905) KSO_006650 PF02547 Queuosine biosynthesis protein KSO_006655 PF01702 Queuine tRNA-ribosyltransferase KSO_006660 PF02699 Preprotein translocase subunit KSO_006665 PF12670 Protein of unknown function (DUF3792) KSO_006670 PF04239 Protein of unknown function (DUF421) KSO_006675 PF01943 Polysaccharide biosynthesis protein KSO_006675 PF14667 Polysaccharide biosynthesis C-terminal domain KSO_006680 PF13797 Post-transcriptional regulator KSO_006685 PF07549 SecD/SecF GG Motif KSO_006685 PF02355 Protein export membrane protein KSO_006690 PF02080 TrkA-C domain KSO_006695 PF06305 Lipopolysaccharide assembly protein A domain KSO_006700 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KSO_006700 PF01368 DHH family KSO_006700 PF02272 DHHA1 domain KSO_006700 PF17768 RecJ OB domain KSO_006705 PF00156 Phosphoribosyl transferase domain KSO_006710 PF02824 TGS domain KSO_006710 PF04607 Region found in RelA / SpoT proteins KSO_006710 PF13291 ACT domain KSO_006715 PF02580 D-Tyr-tRNA(Tyr) deacylase KSO_006720 PF08239 Bacterial SH3 domain KSO_006720 PF01520 N-acetylmuramoyl-L-alanine amidase KSO_006725 PF17449 Uncharacterized YrzK-like KSO_006735 PF03129 Anticodon binding domain KSO_006735 PF13393 Histidyl-tRNA synthetase KSO_006740 PF02938 GAD domain KSO_006740 PF00152 tRNA synthetases class II (D, K and N) KSO_006740 PF01336 OB-fold nucleic acid binding domain KSO_006745 PF00899 ThiF family KSO_006750 PF05496 Holliday junction DNA helicase RuvB P-loop domain KSO_006750 PF16193 AAA C-terminal domain KSO_006750 PF12002 MgsA AAA+ ATPase C terminal KSO_006755 PF02082 Transcriptional regulator KSO_006760 PF00266 Aminotransferase class-V KSO_006770 PF07719 Tetratricopeptide repeat KSO_006770 PF13181 Tetratricopeptide repeat KSO_006775 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KSO_006775 PF13538 UvrD-like helicase C-terminal domain KSO_006775 PF14490 Helix-hairpin-helix containing domain KSO_006780 PF05239 PRC-barrel domain KSO_006790 PF13056 Protein of unknown function (DUF3918) KSO_006795 PF00528 Binding-protein-dependent transport system inner membrane component KSO_006800 PF00528 Binding-protein-dependent transport system inner membrane component KSO_006805 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSO_006810 PF00005 ABC transporter KSO_006815 PF01594 AI-2E family transporter KSO_006820 PF01411 tRNA synthetases class II (A) KSO_006820 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KSO_006820 PF02272 DHHA1 domain KSO_006825 PF06135 IreB regulatory phosphoprotein KSO_006830 PF03652 Holliday junction resolvase KSO_006835 PF06949 Protein of unknown function (DUF1292) KSO_006840 PF02618 YceG-like family KSO_006860 PF00485 Phosphoribulokinase / Uridine kinase family KSO_006880 PF08671 Anti-repressor SinI KSO_006880 PF01381 Helix-turn-helix KSO_006885 PF01381 Helix-turn-helix KSO_006935 PF17356 Phage-like element PBSX protein XtrA KSO_006960 PF00145 C-5 cytosine-specific DNA methylase KSO_007000 PF08281 Sigma-70, region 4 KSO_007010 PF00589 Phage integrase family KSO_007105 PF01464 Transglycosylase SLT domain KSO_007115 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KSO_007115 PF13457 GW (Gly-Tryp) dipeptide domain KSO_007120 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain KSO_007120 PF12708 Pectate lyase superfamily protein KSO_007140 PF05105 Bacteriophage holin family KSO_007145 PF01510 N-acetylmuramoyl-L-alanine amidase KSO_007145 PF01471 Putative peptidoglycan binding domain KSO_007145 PF01476 LysM domain KSO_007165 PF01272 Transcription elongation factor, GreA/GreB, C-term KSO_007165 PF03449 Transcription elongation factor, N-terminal KSO_007170 PF00905 Penicillin binding protein transpeptidase domain KSO_007170 PF03717 Penicillin-binding Protein dimerisation domain KSO_007175 PF07423 Domain of unknown function (DUF1510) KSO_007180 PF10750 Protein of unknown function (DUF2536) KSO_007185 PF13649 Methyltransferase domain KSO_007190 PF01048 Phosphorylase superfamily KSO_007195 PF00291 Pyridoxal-phosphate dependent enzyme KSO_007200 PF01053 Cys/Met metabolism PLP-dependent enzyme KSO_007205 PF14143 YrhC-like protein KSO_007210 PF07849 Protein of unknown function (DUF1641) KSO_007215 PF00384 Molybdopterin oxidoreductase KSO_007215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KSO_007215 PF01568 Molydopterin dinucleotide binding domain KSO_007215 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KSO_007215 PF00037 4Fe-4S binding domain KSO_007220 PF10057 Uncharacterized conserved protein (DUF2294) KSO_007225 PF01226 Formate/nitrite transporter KSO_007235 PF09501 Probable sporulation protein (Bac_small_yrzI) KSO_007240 PF08241 Methyltransferase domain KSO_007245 PF00440 Bacterial regulatory proteins, tetR family KSO_007245 PF16295 Tetracyclin repressor-like, C-terminal domain KSO_007250 PF00667 FAD binding domain KSO_007250 PF00067 Cytochrome P450 KSO_007250 PF00258 Flavodoxin KSO_007250 PF00175 Oxidoreductase NAD-binding domain KSO_007255 PF07690 Major Facilitator Superfamily KSO_007260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_007260 PF03466 LysR substrate binding domain KSO_007265 PF04073 Aminoacyl-tRNA editing domain KSO_007270 PF12706 Beta-lactamase superfamily domain KSO_007280 PF08279 HTH domain KSO_007280 PF05043 Mga helix-turn-helix domain KSO_007280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KSO_007280 PF00874 PRD domain KSO_007285 PF02378 Phosphotransferase system, EIIC KSO_007285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KSO_007285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KSO_007290 PF01238 Phosphomannose isomerase type I KSO_007295 PF01380 SIS domain KSO_007295 PF01418 Helix-turn-helix domain, rpiR family KSO_007315 PF05163 DinB family KSO_007320 PF00583 Acetyltransferase (GNAT) family KSO_007325 PF07690 Major Facilitator Superfamily KSO_007345 PF06445 GyrI-like small molecule binding domain KSO_007345 PF12833 Helix-turn-helix domain KSO_007360 PF04542 Sigma-70 region 2 KSO_007360 PF04545 Sigma-70, region 4 KSO_007370 PF09335 SNARE associated Golgi protein KSO_007375 PF01522 Polysaccharide deacetylase KSO_007380 PF00657 GDSL-like Lipase/Acylhydrolase KSO_007390 PF08970 Sporulation inhibitor A KSO_007400 PF01926 50S ribosome-binding GTPase KSO_007405 PF08501 Shikimate dehydrogenase substrate binding domain KSO_007405 PF01488 Shikimate / quinate 5-dehydrogenase KSO_007405 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KSO_007410 PF01985 CRS1 / YhbY (CRM) domain KSO_007415 PF01467 Cytidylyltransferase-like KSO_007420 PF01966 HD domain KSO_007430 PF13649 Methyltransferase domain KSO_007435 PF03807 NADP oxidoreductase coenzyme F420-dependent KSO_007435 PF14748 Pyrroline-5-carboxylate reductase dimerisation KSO_007440 PF10531 SLBB domain KSO_007445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KSO_007450 PF03772 Competence protein KSO_007450 PF13567 Domain of unknown function (DUF4131) KSO_007450 PF00753 Metallo-beta-lactamase superfamily KSO_007455 PF06144 DNA polymerase III, delta subunit KSO_007460 PF01649 Ribosomal protein S20 KSO_007465 PF03418 Germination protease KSO_007470 PF07454 Stage II sporulation protein P (SpoIIP) KSO_007475 PF12438 Protein of unknown function (DUF3679) KSO_007480 PF06421 GTP-binding protein LepA C-terminus KSO_007480 PF00679 Elongation factor G C-terminus KSO_007480 PF03144 Elongation factor Tu domain 2 KSO_007480 PF00009 Elongation factor Tu GTP binding domain KSO_007485 PF06969 HemN C-terminal domain KSO_007485 PF04055 Radical SAM superfamily KSO_007490 PF01628 HrcA protein C terminal domain KSO_007495 PF01025 GrpE KSO_007500 PF00012 Hsp70 protein KSO_007505 PF00684 DnaJ central domain KSO_007505 PF00226 DnaJ domain KSO_007505 PF01556 DnaJ C terminal domain KSO_007515 PF04452 RNA methyltransferase KSO_007520 PF00919 Uncharacterized protein family UPF0004 KSO_007520 PF01938 TRAM domain KSO_007520 PF04055 Radical SAM superfamily KSO_007525 PF02690 Na+/Pi-cotransporter KSO_007530 PF01165 Ribosomal protein S21 KSO_007535 PF09424 Yqey-like protein KSO_007540 PF01972 Serine dehydrogenase proteinase KSO_007540 PF01957 NfeD-like C-terminal, partner-binding KSO_007545 PF12127 SigmaW regulon antibacterial KSO_007555 PF07873 YabP family KSO_007560 PF06898 Putative stage IV sporulation protein YqfD KSO_007565 PF02562 PhoH-like protein KSO_007570 PF01966 HD domain KSO_007570 PF07697 7TM-HD extracellular KSO_007570 PF07698 7TM receptor with intracellular HD hydrolase KSO_007575 PF02130 Uncharacterized protein family UPF0054 KSO_007580 PF01219 Prokaryotic diacylglycerol kinase KSO_007585 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KSO_007590 PF01926 50S ribosome-binding GTPase KSO_007590 PF07650 KH domain KSO_007595 PF14006 YqzL-like protein KSO_007600 PF02565 Recombination protein O C terminal KSO_007600 PF11967 Recombination protein O N terminal KSO_007605 PF02091 Glycyl-tRNA synthetase alpha subunit KSO_007610 PF02092 Glycyl-tRNA synthetase beta subunit KSO_007615 PF00571 CBS domain KSO_007615 PF08279 HTH domain KSO_007620 PF03618 Kinase/pyrophosphorylase KSO_007625 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KSO_007630 PF01807 CHC2 zinc finger KSO_007630 PF08275 DNA primase catalytic core, N-terminal domain KSO_007630 PF10410 DnaB-helicase binding domain of primase KSO_007635 PF04542 Sigma-70 region 2 KSO_007635 PF04545 Sigma-70, region 4 KSO_007635 PF04539 Sigma-70 region 3 KSO_007635 PF03979 Sigma-70 factor, region 1.1 KSO_007635 PF00140 Sigma-70 factor, region 1.2 KSO_007640 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KSO_007645 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KSO_007650 PF01784 NIF3 (NGG1p interacting factor 3) KSO_007655 PF02401 LytB protein KSO_007660 PF14181 YqfQ-like protein KSO_007665 PF00271 Helicase conserved C-terminal domain KSO_007665 PF00270 DEAD/DEAH box helicase KSO_007670 PF01261 Xylose isomerase-like TIM barrel KSO_007675 PF11116 Protein of unknown function (DUF2624) KSO_007680 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KSO_007680 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KSO_007685 PF01475 Ferric uptake regulator family KSO_007700 PF04551 GcpE protein KSO_007710 PF06691 Protein of unknown function (DUF1189) KSO_007715 PF04306 Protein of unknown function (DUF456) KSO_007720 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KSO_007720 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KSO_007725 PF07690 Major Facilitator Superfamily KSO_007735 PF12849 PBP superfamily domain KSO_007740 PF00528 Binding-protein-dependent transport system inner membrane component KSO_007745 PF00528 Binding-protein-dependent transport system inner membrane component KSO_007750 PF00005 ABC transporter KSO_007755 PF00005 ABC transporter KSO_007770 PF00471 Ribosomal protein L33 KSO_007775 PF01812 5-formyltetrahydrofolate cyclo-ligase family KSO_007785 PF03553 Na+/H+ antiporter family KSO_007790 PF06014 Bacterial protein of unknown function (DUF910) KSO_007795 PF00480 ROK family KSO_007800 PF00246 Zinc carboxypeptidase KSO_007810 PF01910 Thiamine-binding protein KSO_007815 PF10958 Protein of unknown function (DUF2759) KSO_007820 PF00753 Metallo-beta-lactamase superfamily KSO_007825 PF11117 Protein of unknown function (DUF2626) KSO_007830 PF03960 ArsC family KSO_007835 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain KSO_007835 PF01740 STAS domain KSO_007840 PF00571 CBS domain KSO_007840 PF01595 Cyclin M transmembrane N-terminal domain KSO_007840 PF03471 Transporter associated domain KSO_007845 PF01544 CorA-like Mg2+ transporter protein KSO_007850 PF00437 Type II/IV secretion system protein KSO_007855 PF00482 Type II secretion system (T2SS), protein F KSO_007860 PF07963 Prokaryotic N-terminal methylation motif KSO_007865 PF07963 Prokaryotic N-terminal methylation motif KSO_007875 PF15980 Putative Competence protein ComGF KSO_007880 PF14173 ComG operon protein 7 KSO_007885 PF14038 YqzE-like protein KSO_007890 PF13028 Protein of unknown function (DUF3889) KSO_007905 PF12389 Camelysin metallo-endopeptidase KSO_007910 PF08671 Anti-repressor SinI KSO_007910 PF01381 Helix-turn-helix KSO_007915 PF08671 Anti-repressor SinI KSO_007920 PF11079 Bacterial protein YqhG of unknown function KSO_007925 PF00271 Helicase conserved C-terminal domain KSO_007925 PF00176 SNF2 family N-terminal domain KSO_007930 PF08669 Glycine cleavage T-protein C-terminal barrel domain KSO_007930 PF01571 Aminomethyltransferase folate-binding domain KSO_007935 PF02347 Glycine cleavage system P-protein KSO_007940 PF02347 Glycine cleavage system P-protein KSO_007945 PF00581 Rhodanese-like domain KSO_007950 PF03099 Biotin/lipoate A/B protein ligase family KSO_007955 PF02742 Iron dependent repressor, metal binding and dimerisation domain KSO_007955 PF01325 Iron dependent repressor, N-terminal DNA binding domain KSO_007960 PF01734 Patatin-like phospholipase KSO_007970 PF07136 Protein of unknown function (DUF1385) KSO_007975 PF11085 Conserved membrane protein YqhR KSO_007980 PF00557 Metallopeptidase family M24 KSO_007980 PF01321 Creatinase/Prolidase N-terminal domain KSO_007985 PF09285 Elongation factor P, C-terminal KSO_007985 PF01132 Elongation factor P (EF-P) OB domain KSO_007985 PF08207 Elongation factor P (EF-P) KOW-like domain KSO_007990 PF10942 Protein of unknown function (DUF2619) KSO_008000 PF09548 Stage III sporulation protein AB (spore_III_AB) KSO_008005 PF06686 Stage III sporulation protein AC/AD protein family KSO_008010 PF06686 Stage III sporulation protein AC/AD protein family KSO_008015 PF09546 Stage III sporulation protein AE (spore_III_AE) KSO_008020 PF09581 Stage III sporulation protein AF (Spore_III_AF) KSO_008030 PF12685 SpoIIIAH-like protein KSO_008035 PF00364 Biotin-requiring enzyme KSO_008040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KSO_008040 PF02785 Biotin carboxylase C-terminal domain KSO_008040 PF00289 Biotin carboxylase, N-terminal domain KSO_008045 PF03780 Asp23 family, cell envelope-related function KSO_008055 PF01029 NusB family KSO_008060 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KSO_008060 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KSO_008065 PF02601 Exonuclease VII, large subunit KSO_008065 PF13742 OB-fold nucleic acid binding domain KSO_008070 PF02609 Exonuclease VII small subunit KSO_008075 PF00348 Polyprenyl synthetase KSO_008080 PF02780 Transketolase, C-terminal domain KSO_008080 PF02779 Transketolase, pyrimidine binding domain KSO_008080 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KSO_008085 PF01728 FtsJ-like methyltransferase KSO_008085 PF01479 S4 domain KSO_008090 PF02863 Arginine repressor, C-terminal domain KSO_008090 PF01316 Arginine repressor, DNA binding domain KSO_008095 PF13476 AAA domain KSO_008100 PF17820 PDZ domain KSO_008100 PF05580 SpoIVB peptidase S55 KSO_008105 PF00072 Response regulator receiver domain KSO_008105 PF08769 Sporulation initiation factor Spo0A C terminal KSO_008110 PF01168 Alanine racemase, N-terminal domain KSO_008110 PF00842 Alanine racemase, C-terminal domain KSO_008115 PF10676 Spore germination protein gerPA/gerPF KSO_008120 PF10676 Spore germination protein gerPA/gerPF KSO_008125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KSO_008160 PF01520 N-acetylmuramoyl-L-alanine amidase KSO_008165 PF03009 Glycerophosphoryl diester phosphodiesterase family KSO_008170 PF00108 Thiolase, N-terminal domain KSO_008170 PF02803 Thiolase, C-terminal domain KSO_008175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KSO_008175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KSO_008180 PF02770 Acyl-CoA dehydrogenase, middle domain KSO_008180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSO_008180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSO_008185 PF00285 Citrate synthase, C-terminal domain KSO_008190 PF03972 MmgE/PrpD family KSO_008200 PF11118 Protein of unknown function (DUF2627) KSO_008205 PF00158 Sigma-54 interaction domain KSO_008205 PF00989 PAS fold KSO_008205 PF02954 Bacterial regulatory protein, Fis family KSO_008210 PF01515 Phosphate acetyl/butaryl transferase KSO_008215 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KSO_008215 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KSO_008220 PF00871 Acetokinase family KSO_008225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KSO_008225 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSO_008230 PF00676 Dehydrogenase E1 component KSO_008235 PF02779 Transketolase, pyrimidine binding domain KSO_008235 PF02780 Transketolase, C-terminal domain KSO_008240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KSO_008240 PF00364 Biotin-requiring enzyme KSO_008240 PF02817 e3 binding domain KSO_008245 PF00781 Diacylglycerol kinase catalytic domain KSO_008250 PF06491 Disulphide isomerase KSO_008255 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSO_008260 PF00528 Binding-protein-dependent transport system inner membrane component KSO_008265 PF00005 ABC transporter KSO_008270 PF11728 Putative aromatic acid exporter C-terminal domain KSO_008270 PF06081 Aromatic acid exporter family member 1 KSO_008275 PF03734 L,D-transpeptidase catalytic domain KSO_008285 PF01039 Carboxyl transferase domain KSO_008290 PF07687 Peptidase dimerisation domain KSO_008290 PF01546 Peptidase family M20/M25/M40 KSO_008295 PF02096 60Kd inner membrane protein KSO_008305 PF11798 IMS family HHH motif KSO_008305 PF11799 impB/mucB/samB family C-terminal domain KSO_008305 PF00817 impB/mucB/samB family KSO_008310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KSO_008310 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KSO_008315 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KSO_008315 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KSO_008320 PF12706 Beta-lactamase superfamily domain KSO_008325 PF00471 Ribosomal protein L33 KSO_008330 PF12146 Serine aminopeptidase, S33 KSO_008335 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KSO_008345 PF03466 LysR substrate binding domain KSO_008345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_008350 PF02357 Transcription termination factor nusG KSO_008350 PF00467 KOW motif KSO_008355 PF00698 Acyl transferase domain KSO_008355 PF03060 Nitronate monooxygenase KSO_008370 PF13193 AMP-binding enzyme C-terminal domain KSO_008370 PF00501 AMP-binding enzyme KSO_008380 PF08242 Methyltransferase domain KSO_008380 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_008380 PF00550 Phosphopantetheine attachment site KSO_008380 PF14765 Polyketide synthase dehydratase KSO_008380 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_008380 PF08659 KR domain KSO_008380 PF16197 Ketoacyl-synthetase C-terminal extension KSO_008385 PF13193 AMP-binding enzyme C-terminal domain KSO_008385 PF00668 Condensation domain KSO_008385 PF00501 AMP-binding enzyme KSO_008385 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_008385 PF00550 Phosphopantetheine attachment site KSO_008385 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_008385 PF08659 KR domain KSO_008385 PF14765 Polyketide synthase dehydratase KSO_008385 PF16197 Ketoacyl-synthetase C-terminal extension KSO_008390 PF08242 Methyltransferase domain KSO_008390 PF00550 Phosphopantetheine attachment site KSO_008390 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_008390 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_008390 PF16197 Ketoacyl-synthetase C-terminal extension KSO_008390 PF14765 Polyketide synthase dehydratase KSO_008390 PF08659 KR domain KSO_008395 PF00668 Condensation domain KSO_008395 PF16197 Ketoacyl-synthetase C-terminal extension KSO_008395 PF13193 AMP-binding enzyme C-terminal domain KSO_008395 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_008395 PF00501 AMP-binding enzyme KSO_008395 PF14765 Polyketide synthase dehydratase KSO_008395 PF08659 KR domain KSO_008395 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_008395 PF00550 Phosphopantetheine attachment site KSO_008400 PF13193 AMP-binding enzyme C-terminal domain KSO_008400 PF14765 Polyketide synthase dehydratase KSO_008400 PF00668 Condensation domain KSO_008400 PF16197 Ketoacyl-synthetase C-terminal extension KSO_008400 PF00501 AMP-binding enzyme KSO_008400 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_008400 PF08659 KR domain KSO_008400 PF00550 Phosphopantetheine attachment site KSO_008400 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_008405 PF16197 Ketoacyl-synthetase C-terminal extension KSO_008405 PF00550 Phosphopantetheine attachment site KSO_008405 PF08242 Methyltransferase domain KSO_008405 PF08659 KR domain KSO_008405 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_008405 PF14765 Polyketide synthase dehydratase KSO_008405 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_008410 PF08659 KR domain KSO_008410 PF08242 Methyltransferase domain KSO_008410 PF16197 Ketoacyl-synthetase C-terminal extension KSO_008410 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_008410 PF14765 Polyketide synthase dehydratase KSO_008410 PF00550 Phosphopantetheine attachment site KSO_008410 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_008415 PF00067 Cytochrome P450 KSO_008420 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal KSO_008420 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal KSO_008425 PF00378 Enoyl-CoA hydratase/isomerase KSO_008430 PF14748 Pyrroline-5-carboxylate reductase dimerisation KSO_008430 PF03807 NADP oxidoreductase coenzyme F420-dependent KSO_008435 PF00753 Metallo-beta-lactamase superfamily KSO_008440 PF00106 short chain dehydrogenase KSO_008445 PF00291 Pyridoxal-phosphate dependent enzyme KSO_008450 PF00485 Phosphoribulokinase / Uridine kinase family KSO_008465 PF01594 AI-2E family transporter KSO_008470 PF14164 YqzH-like protein KSO_008475 PF08863 YolD-like protein KSO_008480 PF00817 impB/mucB/samB family KSO_008480 PF11799 impB/mucB/samB family C-terminal domain KSO_008485 PF00583 Acetyltransferase (GNAT) family KSO_008490 PF03992 Antibiotic biosynthesis monooxygenase KSO_008495 PF13673 Acetyltransferase (GNAT) domain KSO_008495 PF04229 GrpB protein KSO_008500 PF01521 Iron-sulphur cluster biosynthesis KSO_008505 PF10827 Protein of unknown function (DUF2552) KSO_008510 PF12146 Serine aminopeptidase, S33 KSO_008520 PF00248 Aldo/keto reductase family KSO_008525 PF13072 Mother cell inhibitor of FtsZ KSO_008530 PF00293 NUDIX domain KSO_008540 PF01381 Helix-turn-helix KSO_008545 PF17763 Glutaminase/Asparaginase C-terminal domain KSO_008545 PF00710 Asparaginase, N-terminal KSO_008550 PF10415 Fumarase C C-terminus KSO_008550 PF00206 Lyase KSO_008555 PF03553 Na+/H+ antiporter family KSO_008560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KSO_008560 PF00390 Malic enzyme, N-terminal domain KSO_008560 PF03949 Malic enzyme, NAD binding domain KSO_008575 PF01944 Stage II sporulation protein M KSO_008580 PF01475 Ferric uptake regulator family KSO_008585 PF14004 Protein of unknown function (DUF4227) KSO_008590 PF02899 Phage integrase, N-terminal SAM-like domain KSO_008590 PF00589 Phage integrase family KSO_008595 PF01676 Metalloenzyme superfamily KSO_008600 PF01048 Phosphorylase superfamily KSO_008610 PF00768 D-alanyl-D-alanine carboxypeptidase KSO_008610 PF07943 Penicillin-binding protein 5, C-terminal domain KSO_008615 PF01740 STAS domain KSO_008620 PF13581 Histidine kinase-like ATPase domain KSO_008625 PF04539 Sigma-70 region 3 KSO_008625 PF04545 Sigma-70, region 4 KSO_008625 PF04542 Sigma-70 region 2 KSO_008630 PF12164 Stage V sporulation protein AA KSO_008635 PF13782 Stage V sporulation protein AB KSO_008640 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KSO_008645 PF07451 Stage V sporulation protein AD (SpoVAD) KSO_008650 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KSO_008655 PF14097 Stage V sporulation protein AE1 KSO_008660 PF03323 Bacillus/Clostridium GerA spore germination protein KSO_008665 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KSO_008665 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KSO_008670 PF06207 Protein of unknown function (DUF1002) KSO_008675 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KSO_008685 PF10502 Signal peptidase, peptidase S26 KSO_008695 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KSO_008695 PF01872 RibD C-terminal domain KSO_008700 PF00677 Lumazine binding domain KSO_008705 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KSO_008705 PF00925 GTP cyclohydrolase II KSO_008710 PF00885 6,7-dimethyl-8-ribityllumazine synthase KSO_008715 PF00583 Acetyltransferase (GNAT) family KSO_008725 PF03745 Domain of unknown function (DUF309) KSO_008735 PF02616 Segregation and condensation protein ScpA KSO_008740 PF04079 Segregation and condensation complex subunit ScpB KSO_008745 PF13047 Protein of unknown function (DUF3907) KSO_008750 PF07943 Penicillin-binding protein 5, C-terminal domain KSO_008750 PF00768 D-alanyl-D-alanine carboxypeptidase KSO_008755 PF07670 Nucleoside recognition KSO_008760 PF07670 Nucleoside recognition KSO_008765 PF00849 RNA pseudouridylate synthase KSO_008765 PF01479 S4 domain KSO_008770 PF00578 AhpC/TSA family KSO_008775 PF05140 ResB-like family KSO_008780 PF01578 Cytochrome C assembly protein KSO_008785 PF00072 Response regulator receiver domain KSO_008785 PF00486 Transcriptional regulatory protein, C terminal KSO_008790 PF00672 HAMP domain KSO_008790 PF00512 His Kinase A (phospho-acceptor) domain KSO_008790 PF00989 PAS fold KSO_008790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_008790 PF18698 Histidine kinase sensor domain KSO_008795 PF04542 Sigma-70 region 2 KSO_008795 PF08281 Sigma-70, region 4 KSO_008805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KSO_008805 PF01842 ACT domain KSO_008805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KSO_008810 PF12822 ECF transporter, substrate-specific component KSO_008820 PF14493 Helix-turn-helix domain KSO_008825 PF00271 Helicase conserved C-terminal domain KSO_008825 PF00270 DEAD/DEAH box helicase KSO_008830 PF02517 CPBP intramembrane metalloprotease KSO_008835 PF01476 LysM domain KSO_008840 PF10864 Protein of unknown function (DUF2663) KSO_008845 PF00149 Calcineurin-like phosphoesterase KSO_008850 PF05389 Negative regulator of genetic competence (MecA) KSO_008855 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KSO_008855 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KSO_008865 PF13367 PrsW family intramembrane metalloprotease KSO_008870 PF07486 Cell Wall Hydrolase KSO_008870 PF01471 Putative peptidoglycan binding domain KSO_008875 PF14620 YpeB sporulation KSO_008875 PF03413 Peptidase propeptide and YPEB domain KSO_008880 PF12945 Flagellar protein YcgR KSO_008880 PF07238 PilZ domain KSO_008885 PF17313 Family of unknown function (DUF5359) KSO_008890 PF02224 Cytidylate kinase KSO_008895 PF00575 S1 RNA binding domain KSO_008900 PF01070 FMN-dependent dehydrogenase KSO_008905 PF14140 YpzI-like protein KSO_008920 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KSO_008920 PF01926 50S ribosome-binding GTPase KSO_008925 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KSO_008925 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KSO_008930 PF10966 Protein of unknown function (DUF2768) KSO_008940 PF09547 Stage IV sporulation protein A (spore_IV_A) KSO_008945 PF00216 Bacterial DNA-binding protein KSO_008950 PF01227 GTP cyclohydrolase I KSO_008955 PF02081 Tryptophan RNA-binding attenuator protein KSO_008960 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KSO_008965 PF01209 ubiE/COQ5 methyltransferase family KSO_008970 PF00348 Polyprenyl synthetase KSO_008975 PF00334 Nucleoside diphosphate kinase KSO_008980 PF03705 CheR methyltransferase, all-alpha domain KSO_008980 PF01739 CheR methyltransferase, SAM binding domain KSO_008985 PF01264 Chorismate synthase KSO_008990 PF01761 3-dehydroquinate synthase KSO_008995 PF07736 Chorismate mutase type I KSO_009000 PF00425 chorismate binding enzyme KSO_009000 PF04715 Anthranilate synthase component I, N terminal region KSO_009005 PF00591 Glycosyl transferase family, a/b domain KSO_009005 PF02885 Glycosyl transferase family, helical bundle domain KSO_009010 PF00218 Indole-3-glycerol phosphate synthase KSO_009015 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KSO_009020 PF00291 Pyridoxal-phosphate dependent enzyme KSO_009025 PF00290 Tryptophan synthase alpha chain KSO_009030 PF00155 Aminotransferase class I and II KSO_009035 PF02153 Prephenate dehydrogenase KSO_009035 PF01842 ACT domain KSO_009040 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KSO_009050 PF08864 UPF0302 domain KSO_009050 PF08858 IDEAL domain KSO_009055 PF10673 Protein of unknown function (DUF2487) KSO_009060 PF00355 Rieske [2Fe-2S] domain KSO_009065 PF00033 Cytochrome b/b6/petB KSO_009070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KSO_009070 PF00032 Cytochrome b(C-terminal)/b6/petD KSO_009075 PF07187 Protein of unknown function (DUF1405) KSO_009080 PF09577 Sporulation protein YpjB (SpoYpjB) KSO_009085 PF00190 Cupin KSO_009090 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KSO_009090 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KSO_009095 PF03819 MazG nucleotide pyrophosphohydrolase domain KSO_009100 PF01113 Dihydrodipicolinate reductase, N-terminus KSO_009100 PF05173 Dihydrodipicolinate reductase, C-terminus KSO_009105 PF02142 MGS-like domain KSO_009110 PF02585 GlcNAc-PI de-N-acetylase KSO_009115 PF00534 Glycosyl transferases group 1 KSO_009115 PF13439 Glycosyltransferase Family 4 KSO_009120 PF12627 Probable RNA and SrmB- binding site of polymerase A KSO_009120 PF01743 Poly A polymerase head domain KSO_009120 PF13735 tRNA nucleotidyltransferase domain 2 putative KSO_009125 PF03099 Biotin/lipoate A/B protein ligase family KSO_009125 PF08279 HTH domain KSO_009125 PF02237 Biotin protein ligase C terminal domain KSO_009130 PF02548 Ketopantoate hydroxymethyltransferase KSO_009135 PF02569 Pantoate-beta-alanine ligase KSO_009140 PF02261 Aspartate decarboxylase KSO_009145 PF13307 Helicase C-terminal domain KSO_009145 PF04851 Type III restriction enzyme, res subunit KSO_009145 PF00929 Exonuclease KSO_009150 PF14084 Protein of unknown function (DUF4264) KSO_009155 PF03413 Peptidase propeptide and YPEB domain KSO_009155 PF17881 Domain of unknown function (DUF5590) KSO_009160 PF00155 Aminotransferase class I and II KSO_009165 PF00152 tRNA synthetases class II (D, K and N) KSO_009165 PF01336 OB-fold nucleic acid binding domain KSO_009170 PF07261 Replication initiation and membrane attachment KSO_009175 PF00730 HhH-GPD superfamily base excision DNA repair protein KSO_009175 PF00633 Helix-hairpin-helix motif KSO_009175 PF10576 Iron-sulfur binding domain of endonuclease III KSO_009185 PF00912 Transglycosylase KSO_009185 PF00905 Penicillin binding protein transpeptidase domain KSO_009190 PF03838 Recombination protein U KSO_009195 PF10720 Protein of unknown function (DUF2515) KSO_009205 PF17522 Family of unknown function (DUF5446) KSO_009210 PF08807 Bacterial domain of unknown function (DUF1798) KSO_009215 PF14178 YppF-like protein KSO_009220 PF14179 YppG-like protein KSO_009230 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KSO_009235 PF09369 Domain of unknown function (DUF1998) KSO_009235 PF00270 DEAD/DEAH box helicase KSO_009235 PF00271 Helicase conserved C-terminal domain KSO_009240 PF13482 RNase_H superfamily KSO_009245 PF11122 Inner spore coat protein D KSO_009250 PF06908 YspA SLOG family KSO_009255 PF05103 DivIVA protein KSO_009260 PF02926 THUMP domain KSO_009260 PF01170 Putative RNA methylase family UPF0020 KSO_009270 PF14139 YpzG-like protein KSO_009280 PF13307 Helicase C-terminal domain KSO_009285 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KSO_009290 PF00156 Phosphoribosyl transferase domain KSO_009295 PF00860 Permease family KSO_009305 PF00857 Isochorismatase family KSO_009335 PF02797 Chalcone and stilbene synthases, C-terminal domain KSO_009335 PF00195 Chalcone and stilbene synthases, N-terminal domain KSO_009340 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family KSO_009345 PF00350 Dynamin family KSO_009350 PF10752 Protein of unknown function (DUF2533) KSO_009360 PF01367 5'-3' exonuclease, C-terminal SAM fold KSO_009360 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KSO_009370 PF13456 Reverse transcriptase-like KSO_009375 PF02592 Putative vitamin uptake transporter KSO_009380 PF13456 Reverse transcriptase-like KSO_009385 PF10782 Zinc-finger KSO_009390 PF10819 Protein of unknown function (DUF2564) KSO_009400 PF00313 'Cold-shock' DNA-binding domain KSO_009405 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KSO_009405 PF00534 Glycosyl transferases group 1 KSO_009410 PF04204 Homoserine O-succinyltransferase KSO_009415 PF00255 Glutathione peroxidase KSO_009420 PF01966 HD domain KSO_009425 PF08712 Scaffold protein Nfu/NifU N terminal KSO_009425 PF13769 Virulence factor KSO_009430 PF00920 Dehydratase family KSO_009435 PF06491 Disulphide isomerase KSO_009440 PF04445 Putative SAM-dependent methyltransferase KSO_009445 PF14005 YpjP-like protein KSO_009450 PF00303 Thymidylate synthase KSO_009455 PF00186 Dihydrofolate reductase KSO_009465 PF03006 Haemolysin-III related KSO_009470 PF08461 Ribonuclease R winged-helix domain KSO_009470 PF00158 Sigma-54 interaction domain KSO_009475 PF00291 Pyridoxal-phosphate dependent enzyme KSO_009475 PF00585 C-terminal regulatory domain of Threonine dehydratase KSO_009480 PF10751 Protein of unknown function (DUF2535) KSO_009485 PF02630 SCO1/SenC KSO_009490 PF13472 GDSL-like Lipase/Acylhydrolase family KSO_009495 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) KSO_009500 PF01047 MarR family KSO_009505 PF01625 Peptide methionine sulfoxide reductase KSO_009510 PF01641 SelR domain KSO_009515 PF02719 Polysaccharide biosynthesis protein KSO_009520 PF02333 Phytase KSO_009525 PF12996 DUF based on E. rectale Gene description (DUF3880) KSO_009540 PF00535 Glycosyl transferase family 2 KSO_009545 PF00583 Acetyltransferase (GNAT) family KSO_009555 PF06445 GyrI-like small molecule binding domain KSO_009560 PF00202 Aminotransferase class-III KSO_009565 PF01144 Coenzyme A transferase KSO_009570 PF01144 Coenzyme A transferase KSO_009575 PF01546 Peptidase family M20/M25/M40 KSO_009575 PF07687 Peptidase dimerisation domain KSO_009580 PF00583 Acetyltransferase (GNAT) family KSO_009585 PF12544 Lysine-2,3-aminomutase KSO_009590 PF14122 YokU-like protein, putative antitoxin KSO_009595 PF06855 YozE SAM-like fold KSO_009615 PF14162 YozD-like protein KSO_009620 PF01569 PAP2 superfamily KSO_009625 PF14191 YodL-like KSO_009635 PF01048 Phosphorylase superfamily KSO_009640 PF02557 D-alanyl-D-alanine carboxypeptidase KSO_009650 PF08241 Methyltransferase domain KSO_009655 PF01471 Putative peptidoglycan binding domain KSO_009655 PF03572 Peptidase family S41 KSO_009655 PF17820 PDZ domain KSO_009660 PF00392 Bacterial regulatory proteins, gntR family KSO_009660 PF07702 UTRA domain KSO_009665 PF00232 Glycosyl hydrolase family 1 KSO_009680 PF00474 Sodium:solute symporter family KSO_009685 PF11755 Protein of unknown function (DUF3311) KSO_009690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSO_009695 PF01738 Dienelactone hydrolase family KSO_009700 PF00881 Nitroreductase family KSO_009705 PF01638 HxlR-like helix-turn-helix KSO_009715 PF14552 Tautomerase enzyme KSO_009730 PF00892 EamA-like transporter family KSO_009740 PF08830 Protein of unknown function (DUF1806) KSO_009745 PF02585 GlcNAc-PI de-N-acetylase KSO_009750 PF01740 STAS domain KSO_009755 PF01554 MatE KSO_009765 PF02457 DisA bacterial checkpoint controller nucleotide-binding KSO_009765 PF10372 Bacterial membrane-spanning protein N-terminus KSO_009770 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KSO_009780 PF01476 LysM domain KSO_009780 PF00877 NlpC/P60 family KSO_009785 PF13627 Prokaryotic lipoprotein-attachment site KSO_009785 PF00080 Copper/zinc superoxide dismutase (SODC) KSO_009790 PF07728 AAA domain (dynein-related subfamily) KSO_009795 PF00092 von Willebrand factor type A domain KSO_009800 PF02779 Transketolase, pyrimidine binding domain KSO_009800 PF16870 2-oxoglutarate dehydrogenase C-terminal KSO_009800 PF00676 Dehydrogenase E1 component KSO_009805 PF00364 Biotin-requiring enzyme KSO_009805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KSO_009805 PF02817 e3 binding domain KSO_009810 PF00753 Metallo-beta-lactamase superfamily KSO_009815 PF01758 Sodium Bile acid symporter family KSO_009820 PF00209 Sodium:neurotransmitter symporter family KSO_009825 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KSO_009825 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KSO_009830 PF13243 Squalene-hopene cyclase C-terminal domain KSO_009830 PF13249 Squalene-hopene cyclase N-terminal domain KSO_009835 PF00171 Aldehyde dehydrogenase family KSO_009850 PF08000 Bacterial PH domain KSO_009865 PF00011 Hsp20/alpha crystallin family KSO_009880 PF01258 Prokaryotic dksA/traR C4-type zinc finger KSO_009885 PF02525 Flavodoxin-like fold KSO_009895 PF00570 HRDC domain KSO_009895 PF00270 DEAD/DEAH box helicase KSO_009895 PF16124 RecQ zinc-binding KSO_009895 PF00271 Helicase conserved C-terminal domain KSO_009895 PF09382 RQC domain KSO_009900 PF01476 LysM domain KSO_009900 PF06725 3D domain KSO_009910 PF17676 LD-carboxypeptidase C-terminal domain KSO_009910 PF02016 LD-carboxypeptidase N-terminal domain KSO_009920 PF18846 Bacterial archaeo-eukaryotic release factor family 5 KSO_009925 PF04238 Protein of unknown function (DUF420) KSO_009940 PF01022 Bacterial regulatory protein, arsR family KSO_009950 PF00753 Metallo-beta-lactamase superfamily KSO_009955 PF13305 Tetracyclin repressor-like, C-terminal domain KSO_009955 PF00440 Bacterial regulatory proteins, tetR family KSO_009960 PF12833 Helix-turn-helix domain KSO_009960 PF07883 Cupin domain KSO_009965 PF01588 Putative tRNA binding domain KSO_009975 PF01638 HxlR-like helix-turn-helix KSO_010000 PF01568 Molydopterin dinucleotide binding domain KSO_010000 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KSO_010000 PF00384 Molybdopterin oxidoreductase KSO_010005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KSO_010005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KSO_010010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KSO_010010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KSO_010015 PF07690 Major Facilitator Superfamily KSO_010025 PF06103 Bacterial protein of unknown function (DUF948) KSO_010030 PF00106 short chain dehydrogenase KSO_010035 PF02334 Replication terminator protein KSO_010040 PF03807 NADP oxidoreductase coenzyme F420-dependent KSO_010040 PF14748 Pyrroline-5-carboxylate reductase dimerisation KSO_010045 PF01472 PUA domain KSO_010045 PF00696 Amino acid kinase family KSO_010050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_010050 PF03466 LysR substrate binding domain KSO_010055 PF00310 Glutamine amidotransferases class-II KSO_010055 PF04898 Glutamate synthase central domain KSO_010055 PF01493 GXGXG motif KSO_010055 PF01645 Conserved region in glutamate synthase KSO_010060 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KSO_010060 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSO_010070 PF08240 Alcohol dehydrogenase GroES-like domain KSO_010070 PF00107 Zinc-binding dehydrogenase KSO_010075 PF03466 LysR substrate binding domain KSO_010075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_010090 PF07690 Major Facilitator Superfamily KSO_010100 PF12728 Helix-turn-helix domain KSO_010105 PF00589 Phage integrase family KSO_010110 PF16800 IseA DL-endopeptidase inhibitor KSO_010120 PF01554 MatE KSO_010125 PF01263 Aldose 1-epimerase KSO_010130 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family KSO_010135 PF00550 Phosphopantetheine attachment site KSO_010135 PF00668 Condensation domain KSO_010135 PF00501 AMP-binding enzyme KSO_010135 PF13193 AMP-binding enzyme C-terminal domain KSO_010140 PF00550 Phosphopantetheine attachment site KSO_010140 PF00668 Condensation domain KSO_010140 PF13193 AMP-binding enzyme C-terminal domain KSO_010140 PF00501 AMP-binding enzyme KSO_010145 PF00501 AMP-binding enzyme KSO_010145 PF13193 AMP-binding enzyme C-terminal domain KSO_010145 PF00668 Condensation domain KSO_010145 PF00550 Phosphopantetheine attachment site KSO_010150 PF00501 AMP-binding enzyme KSO_010150 PF13193 AMP-binding enzyme C-terminal domain KSO_010150 PF00668 Condensation domain KSO_010150 PF00550 Phosphopantetheine attachment site KSO_010155 PF13193 AMP-binding enzyme C-terminal domain KSO_010155 PF00501 AMP-binding enzyme KSO_010155 PF00550 Phosphopantetheine attachment site KSO_010155 PF00975 Thioesterase domain KSO_010155 PF00668 Condensation domain KSO_010160 PF07098 Protein of unknown function (DUF1360) KSO_010165 PF02638 Glycosyl hydrolase-like 10 KSO_010170 PF02770 Acyl-CoA dehydrogenase, middle domain KSO_010170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSO_010170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KSO_010175 PF00501 AMP-binding enzyme KSO_010175 PF13193 AMP-binding enzyme C-terminal domain KSO_010180 PF02785 Biotin carboxylase C-terminal domain KSO_010180 PF00289 Biotin carboxylase, N-terminal domain KSO_010180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KSO_010185 PF00364 Biotin-requiring enzyme KSO_010190 PF00682 HMGL-like KSO_010195 PF00378 Enoyl-CoA hydratase/isomerase KSO_010200 PF01039 Carboxyl transferase domain KSO_010205 PF09335 SNARE associated Golgi protein KSO_010210 PF00483 Nucleotidyl transferase KSO_010215 PF04138 GtrA-like protein KSO_010220 PF03744 6-carboxyhexanoate--CoA ligase KSO_010225 PF00202 Aminotransferase class-III KSO_010230 PF00155 Aminotransferase class I and II KSO_010240 PF04055 Radical SAM superfamily KSO_010240 PF06968 Biotin and Thiamin Synthesis associated domain KSO_010245 PF00067 Cytochrome P450 KSO_010255 PF01144 Coenzyme A transferase KSO_010260 PF01144 Coenzyme A transferase KSO_010270 PF00698 Acyl transferase domain KSO_010275 PF00202 Aminotransferase class-III KSO_010275 PF00501 AMP-binding enzyme KSO_010275 PF13193 AMP-binding enzyme C-terminal domain KSO_010275 PF00668 Condensation domain KSO_010275 PF16197 Ketoacyl-synthetase C-terminal extension KSO_010275 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_010275 PF00550 Phosphopantetheine attachment site KSO_010275 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_010280 PF00501 AMP-binding enzyme KSO_010280 PF13193 AMP-binding enzyme C-terminal domain KSO_010280 PF00668 Condensation domain KSO_010280 PF00550 Phosphopantetheine attachment site KSO_010285 PF13193 AMP-binding enzyme C-terminal domain KSO_010285 PF00501 AMP-binding enzyme KSO_010285 PF00668 Condensation domain KSO_010285 PF00550 Phosphopantetheine attachment site KSO_010285 PF00975 Thioesterase domain KSO_010290 PF03422 Carbohydrate binding module (family 6) KSO_010290 PF04616 Glycosyl hydrolases family 43 KSO_010295 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain KSO_010295 PF17189 Glycosyl hydrolase family 30 beta sandwich domain KSO_010300 PF00072 Response regulator receiver domain KSO_010300 PF00486 Transcriptional regulatory protein, C terminal KSO_010305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_010305 PF00512 His Kinase A (phospho-acceptor) domain KSO_010315 PF00942 Cellulose binding domain KSO_010315 PF00150 Cellulase (glycosyl hydrolase family 5) KSO_010330 PF14158 YndJ-like protein KSO_010335 PF13761 Domain of unknown function (DUF4166) KSO_010345 PF07690 Major Facilitator Superfamily KSO_010350 PF00356 Bacterial regulatory proteins, lacI family KSO_010355 PF00106 short chain dehydrogenase KSO_010370 PF01081 KDPG and KHG aldolase KSO_010375 PF08240 Alcohol dehydrogenase GroES-like domain KSO_010375 PF00107 Zinc-binding dehydrogenase KSO_010380 PF00294 pfkB family carbohydrate kinase KSO_010385 PF01235 Sodium:alanine symporter family KSO_010400 PF03989 DNA gyrase C-terminal domain, beta-propeller KSO_010400 PF00521 DNA gyrase/topoisomerase IV, subunit A KSO_010405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_010405 PF01751 Toprim domain KSO_010405 PF00986 DNA gyrase B subunit, carboxyl terminus KSO_010405 PF00204 DNA gyrase B KSO_010410 PF13380 CoA binding domain KSO_010415 PF02660 Glycerol-3-phosphate acyltransferase KSO_010420 PF01521 Iron-sulphur cluster biosynthesis KSO_010430 PF03061 Thioesterase superfamily KSO_010440 PF08177 Small acid-soluble spore protein N family KSO_010445 PF13040 Fur-regulated basic protein B KSO_010450 PF00578 AhpC/TSA family KSO_010455 PF00694 Aconitase C-terminal domain KSO_010455 PF00330 Aconitase family (aconitate hydratase) KSO_010465 PF08179 Small acid-soluble spore protein P family KSO_010475 PF11084 Protein of unknown function (DUF2621) KSO_010480 PF07301 Protein of unknown function (DUF1453) KSO_010485 PF00072 Response regulator receiver domain KSO_010490 PF02683 Cytochrome C biogenesis protein transmembrane region KSO_010495 PF09388 Spo0E like sporulation regulatory protein KSO_010500 PF03672 Uncharacterised protein family (UPF0154) KSO_010505 PF10747 Sporulation inhibitor of replication protein SirA KSO_010510 PF02779 Transketolase, pyrimidine binding domain KSO_010510 PF02780 Transketolase, C-terminal domain KSO_010510 PF00456 Transketolase, thiamine diphosphate binding domain KSO_010515 PF05979 Bacterial protein of unknown function (DUF896) KSO_010520 PF00239 Resolvase, N terminal domain KSO_010525 PF01476 LysM domain KSO_010530 PF01726 LexA DNA binding domain KSO_010530 PF00717 Peptidase S24-like KSO_010540 PF10710 Protein of unknown function (DUF2512) KSO_010555 PF05908 Poly-gamma-glutamate hydrolase KSO_010560 PF00692 dUTPase KSO_010565 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain KSO_010565 PF12708 Pectate lyase superfamily protein KSO_010580 PF13302 Acetyltransferase (GNAT) domain KSO_010585 PF09680 Family of unknown function KSO_010590 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KSO_010590 PF18416 N-acetylglucosamine binding protein domain 2 KSO_010605 PF13021 Domain of unknown function (DUF3885) KSO_010615 PF00583 Acetyltransferase (GNAT) family KSO_010615 PF14268 YoaP-like KSO_010620 PF17094 Uncharacterised protein family (UPF0715) KSO_010635 PF08240 Alcohol dehydrogenase GroES-like domain KSO_010635 PF00107 Zinc-binding dehydrogenase KSO_010640 PF05163 DinB family KSO_010645 PF08279 HTH domain KSO_010645 PF13280 WYL domain KSO_010665 PF00391 PEP-utilising enzyme, mobile domain KSO_010665 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KSO_010670 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KSO_010670 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KSO_010675 PF01261 Xylose isomerase-like TIM barrel KSO_010680 PF00480 ROK family KSO_010685 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KSO_010685 PF04616 Glycosyl hydrolases family 43 KSO_010700 PF00120 Glutamine synthetase, catalytic domain KSO_010700 PF03951 Glutamine synthetase, beta-Grasp domain KSO_010705 PF13411 MerR HTH family regulatory protein KSO_010710 PF06838 Methionine gamma-lyase KSO_010715 PF01926 50S ribosome-binding GTPase KSO_010715 PF13167 GTP-binding GTPase N-terminal KSO_010715 PF16360 GTP-binding GTPase Middle Region KSO_010720 PF00004 ATPase family associated with various cellular activities (AAA) KSO_010720 PF17866 AAA lid domain KSO_010730 PF01520 N-acetylmuramoyl-L-alanine amidase KSO_010730 PF05036 Sporulation related domain KSO_010740 PF00268 Ribonucleotide reductase, small chain KSO_010745 PF00317 Ribonucleotide reductase, all-alpha domain KSO_010745 PF02867 Ribonucleotide reductase, barrel domain KSO_010745 PF08343 Ribonucleotide reductase N-terminal KSO_010750 PF07972 NrdI Flavodoxin like KSO_010760 PF14157 YmzC-like protein KSO_010765 PF17209 Hfq protein KSO_010775 PF12788 YmaF family KSO_010785 PF00893 Small Multidrug Resistance protein KSO_010790 PF00893 Small Multidrug Resistance protein KSO_010795 PF02566 OsmC-like protein KSO_010800 PF05908 Poly-gamma-glutamate hydrolase KSO_010810 PF00082 Subtilase family KSO_010820 PF06912 Protein of unknown function (DUF1275) KSO_010825 PF14040 Deoxyribonuclease NucA/NucB KSO_010830 PF00067 Cytochrome P450 KSO_010835 PF08242 Methyltransferase domain KSO_010835 PF00550 Phosphopantetheine attachment site KSO_010835 PF16197 Ketoacyl-synthetase C-terminal extension KSO_010835 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_010835 PF14765 Polyketide synthase dehydratase KSO_010835 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_010835 PF00975 Thioesterase domain KSO_010840 PF00501 AMP-binding enzyme KSO_010840 PF13193 AMP-binding enzyme C-terminal domain KSO_010840 PF00668 Condensation domain KSO_010840 PF14765 Polyketide synthase dehydratase KSO_010840 PF16197 Ketoacyl-synthetase C-terminal extension KSO_010840 PF00550 Phosphopantetheine attachment site KSO_010840 PF08659 KR domain KSO_010840 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_010840 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_010845 PF14765 Polyketide synthase dehydratase KSO_010845 PF16197 Ketoacyl-synthetase C-terminal extension KSO_010845 PF00550 Phosphopantetheine attachment site KSO_010845 PF08659 KR domain KSO_010845 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_010845 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_010845 PF08242 Methyltransferase domain KSO_010845 PF00550 Phosphopantetheine attachment site KSO_010845 PF16197 Ketoacyl-synthetase C-terminal extension KSO_010845 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_010845 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_010845 PF08659 KR domain KSO_010845 PF08242 Methyltransferase domain KSO_010845 PF14765 Polyketide synthase dehydratase KSO_010850 PF16197 Ketoacyl-synthetase C-terminal extension KSO_010850 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_010850 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_010850 PF08659 KR domain KSO_010850 PF00550 Phosphopantetheine attachment site KSO_010850 PF14765 Polyketide synthase dehydratase KSO_010855 PF00501 AMP-binding enzyme KSO_010855 PF00550 Phosphopantetheine attachment site KSO_010855 PF08659 KR domain KSO_010855 PF00668 Condensation domain KSO_010855 PF13193 AMP-binding enzyme C-terminal domain KSO_010855 PF16197 Ketoacyl-synthetase C-terminal extension KSO_010855 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_010855 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_010855 PF14765 Polyketide synthase dehydratase KSO_010860 PF00378 Enoyl-CoA hydratase/isomerase KSO_010865 PF00378 Enoyl-CoA hydratase/isomerase KSO_010870 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal KSO_010870 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal KSO_010875 PF00550 Phosphopantetheine attachment site KSO_010880 PF00698 Acyl transferase domain KSO_010885 PF00698 Acyl transferase domain KSO_010890 PF00698 Acyl transferase domain KSO_010895 PF00753 Metallo-beta-lactamase superfamily KSO_010905 PF08676 MutL C terminal dimerisation domain KSO_010905 PF01119 DNA mismatch repair protein, C-terminal domain KSO_010910 PF05190 MutS family domain IV KSO_010910 PF00488 MutS domain V KSO_010910 PF05192 MutS domain III KSO_010910 PF05188 MutS domain II KSO_010910 PF01624 MutS domain I KSO_010915 PF10628 Outer spore coat protein E (CotE) KSO_010920 PF06133 Control of competence regulator ComK, YlbF/YmcA KSO_010925 PF04055 Radical SAM superfamily KSO_010925 PF00919 Uncharacterized protein family UPF0004 KSO_010925 PF01938 TRAM domain KSO_010930 PF00155 Aminotransferase class I and II KSO_010935 PF00107 Zinc-binding dehydrogenase KSO_010935 PF08240 Alcohol dehydrogenase GroES-like domain KSO_010940 PF04232 Stage V sporulation protein S (SpoVS) KSO_010945 PF13277 YmdB-like protein KSO_010950 PF01966 HD domain KSO_010950 PF00013 KH domain KSO_010950 PF12072 Domain of unknown function (DUF3552) KSO_010955 PF00144 Beta-lactamase KSO_010960 PF00154 recA bacterial DNA recombination protein KSO_010965 PF02464 Competence-damaged protein KSO_010965 PF18146 Damage-inducible protein CinA KH domain KSO_010965 PF00994 Probable molybdopterin binding domain KSO_010970 PF01066 CDP-alcohol phosphatidyltransferase KSO_010975 PF13464 Domain of unknown function (DUF4115) KSO_010980 PF11868 Protein of unknown function (DUF3388) KSO_010985 PF11588 Protein of unknown function (DUF3243) KSO_010995 PF05193 Peptidase M16 inactive domain KSO_010995 PF00675 Insulinase (Peptidase family M16) KSO_011000 PF05193 Peptidase M16 inactive domain KSO_011005 PF03176 MMPL family KSO_011010 PF01047 MarR family KSO_011015 PF07690 Major Facilitator Superfamily KSO_011020 PF00392 Bacterial regulatory proteins, gntR family KSO_011020 PF07702 UTRA domain KSO_011025 PF01580 FtsK/SpoIIIE family KSO_011025 PF09397 Ftsk gamma domain KSO_011025 PF17854 FtsK alpha domain KSO_011030 PF14035 YlzJ-like protein KSO_011035 PF00574 Clp protease KSO_011040 PF00753 Metallo-beta-lactamase superfamily KSO_011040 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KSO_011040 PF17770 Ribonuclease J C-terminal domain KSO_011045 PF00701 Dihydrodipicolinate synthetase family KSO_011050 PF00696 Amino acid kinase family KSO_011050 PF13840 ACT domain KSO_011055 PF01118 Semialdehyde dehydrogenase, NAD binding domain KSO_011055 PF02774 Semialdehyde dehydrogenase, dimerisation domain KSO_011060 PF02441 Flavoprotein KSO_011065 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KSO_011065 PF16924 Dipicolinate synthase subunit A N-terminal domain KSO_011070 PF05239 PRC-barrel domain KSO_011075 PF05193 Peptidase M16 inactive domain KSO_011075 PF00675 Insulinase (Peptidase family M16) KSO_011080 PF01522 Polysaccharide deacetylase KSO_011085 PF00575 S1 RNA binding domain KSO_011085 PF03725 3' exoribonuclease family, domain 2 KSO_011085 PF01138 3' exoribonuclease family, domain 1 KSO_011085 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KSO_011085 PF00013 KH domain KSO_011090 PF00312 Ribosomal protein S15 KSO_011095 PF01687 Riboflavin kinase KSO_011095 PF06574 FAD synthetase KSO_011100 PF01509 TruB family pseudouridylate synthase (N terminal domain) KSO_011100 PF16198 tRNA pseudouridylate synthase B C-terminal domain KSO_011105 PF02033 Ribosome-binding factor A KSO_011110 PF04456 Protein of unknown function (DUF503) KSO_011115 PF11987 Translation-initiation factor 2 KSO_011115 PF04760 Translation initiation factor IF-2, N-terminal region KSO_011115 PF00009 Elongation factor Tu GTP binding domain KSO_011120 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KSO_011125 PF04296 Protein of unknown function (DUF448) KSO_011130 PF00575 S1 RNA binding domain KSO_011130 PF13184 NusA-like KH domain KSO_011130 PF08529 NusA N-terminal domain KSO_011135 PF17384 RimP C-terminal SH3 domain KSO_011135 PF02576 RimP N-terminal domain KSO_011140 PF02811 PHP domain KSO_011140 PF14579 Helix-hairpin-helix motif KSO_011140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KSO_011140 PF00929 Exonuclease KSO_011140 PF07733 Bacterial DNA polymerase III alpha NTPase domain KSO_011140 PF11490 DNA polymerase III polC-type N-terminus II KSO_011140 PF14480 DNA polymerase III polC-type N-terminus I KSO_011145 PF04073 Aminoacyl-tRNA editing domain KSO_011145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KSO_011145 PF03129 Anticodon binding domain KSO_011150 PF17820 PDZ domain KSO_011150 PF02163 Peptidase family M50 KSO_011155 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KSO_011155 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KSO_011155 PF13288 DXP reductoisomerase C-terminal domain KSO_011165 PF01255 Putative undecaprenyl diphosphate synthase KSO_011170 PF01765 Ribosome recycling factor KSO_011175 PF00696 Amino acid kinase family KSO_011180 PF00889 Elongation factor TS KSO_011185 PF00318 Ribosomal protein S2 KSO_011195 PF04539 Sigma-70 region 3 KSO_011195 PF04545 Sigma-70, region 4 KSO_011195 PF04542 Sigma-70 region 2 KSO_011200 PF03975 CheD chemotactic sensory transduction KSO_011205 PF04509 CheC-like family KSO_011210 PF01584 CheW-like domain KSO_011215 PF01584 CheW-like domain KSO_011215 PF01627 Hpt domain KSO_011215 PF07194 P2 response regulator binding domain KSO_011215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_011215 PF02895 Signal transducing histidine kinase, homodimeric domain KSO_011220 PF00072 Response regulator receiver domain KSO_011220 PF01339 CheB methylesterase KSO_011225 PF10609 NUBPL iron-transfer P-loop NTPase KSO_011230 PF00448 SRP54-type protein, GTPase domain KSO_011235 PF00771 FHIPEP family KSO_011240 PF01312 FlhB HrpN YscU SpaS Family KSO_011245 PF01311 Bacterial export proteins, family 1 KSO_011250 PF01313 Bacterial export proteins, family 3 KSO_011255 PF00813 FliP family KSO_011260 PF04347 Flagellar biosynthesis protein, FliO KSO_011265 PF00072 Response regulator receiver domain KSO_011270 PF04509 CheC-like family KSO_011270 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KSO_011275 PF02154 Flagellar motor switch protein FliM KSO_011275 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KSO_011280 PF03748 Flagellar basal body-associated protein FliL KSO_011285 PF06289 Flagellar and Swarming motility proteins KSO_011290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KSO_011290 PF00460 Flagella basal body rod protein KSO_011295 PF03963 Flagellar hook capping protein - N-terminal region KSO_011300 PF02120 Flagellar hook-length control protein FliK KSO_011305 PF03448 MgtE intracellular N domain KSO_011310 PF02050 Flagellar FliJ protein KSO_011315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KSO_011315 PF18269 T3SS EscN ATPase C-terminal domain KSO_011315 PF02874 ATP synthase alpha/beta family, beta-barrel domain KSO_011320 PF02108 Flagellar assembly protein FliH KSO_011325 PF14842 FliG N-terminal domain KSO_011325 PF14841 FliG middle domain KSO_011325 PF01706 FliG C-terminal domain KSO_011330 PF08345 Flagellar M-ring protein C-terminal KSO_011330 PF01514 Secretory protein of YscJ/FliF family KSO_011335 PF02049 Flagellar hook-basal body complex protein FliE KSO_011340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KSO_011340 PF00460 Flagella basal body rod protein KSO_011345 PF00460 Flagella basal body rod protein KSO_011350 PF08222 CodY helix-turn-helix domain KSO_011350 PF06018 CodY GAF-like domain KSO_011355 PF00004 ATPase family associated with various cellular activities (AAA) KSO_011355 PF07724 AAA domain (Cdc48 subfamily) KSO_011355 PF10431 C-terminal, D2-small domain, of ClpB protein KSO_011360 PF00227 Proteasome subunit KSO_011365 PF00589 Phage integrase family KSO_011365 PF02899 Phage integrase, N-terminal SAM-like domain KSO_011370 PF01134 Glucose inhibited division protein A KSO_011375 PF01396 Topoisomerase DNA binding C4 zinc finger KSO_011375 PF01751 Toprim domain KSO_011375 PF01131 DNA topoisomerase KSO_011385 PF02481 DNA recombination-mediator protein A KSO_011390 PF02629 CoA binding domain KSO_011390 PF00549 CoA-ligase KSO_011395 PF00549 CoA-ligase KSO_011395 PF08442 ATP-grasp domain KSO_011400 PF01312 FlhB HrpN YscU SpaS Family KSO_011410 PF01351 Ribonuclease HII KSO_011415 PF01926 50S ribosome-binding GTPase KSO_011420 PF01245 Ribosomal protein L19 KSO_011425 PF01746 tRNA (Guanine-1)-methyltransferase KSO_011430 PF05239 PRC-barrel domain KSO_011430 PF01782 RimM N-terminal domain KSO_011435 PF11068 YlqD protein KSO_011445 PF00886 Ribosomal protein S16 KSO_011450 PF02978 Signal peptide binding domain KSO_011450 PF00448 SRP54-type protein, GTPase domain KSO_011450 PF02881 SRP54-type protein, helical bundle domain KSO_011455 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KSO_011465 PF00448 SRP54-type protein, GTPase domain KSO_011465 PF02881 SRP54-type protein, helical bundle domain KSO_011470 PF02463 RecF/RecN/SMC N terminal domain KSO_011470 PF06470 SMC proteins Flexible Hinge Domain KSO_011475 PF00035 Double-stranded RNA binding motif KSO_011475 PF14622 Ribonuclease-III-like KSO_011480 PF00550 Phosphopantetheine attachment site KSO_011490 PF00698 Acyl transferase domain KSO_011495 PF02504 Fatty acid synthesis protein KSO_011500 PF03061 Thioesterase superfamily KSO_011505 PF00271 Helicase conserved C-terminal domain KSO_011505 PF17191 RecG wedge domain KSO_011505 PF00270 DEAD/DEAH box helicase KSO_011510 PF03313 Serine dehydratase alpha chain KSO_011515 PF03315 Serine dehydratase beta chain KSO_011515 PF01842 ACT domain KSO_011520 PF13684 Dihydroxyacetone kinase family KSO_011520 PF02734 DAK2 domain KSO_011525 PF03780 Asp23 family, cell envelope-related function KSO_011530 PF00830 Ribosomal L28 family KSO_011535 PF08183 Stage V sporulation protein family KSO_011540 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KSO_011540 PF04263 Thiamin pyrophosphokinase, catalytic domain KSO_011545 PF00834 Ribulose-phosphate 3 epimerase family KSO_011550 PF16745 RsgA N-terminal domain KSO_011550 PF03193 RsgA GTPase KSO_011555 PF00069 Protein kinase domain KSO_011555 PF03793 PASTA domain KSO_011565 PF04055 Radical SAM superfamily KSO_011570 PF01029 NusB family KSO_011570 PF01189 16S rRNA methyltransferase RsmB/F KSO_011575 PF00551 Formyl transferase KSO_011575 PF02911 Formyl transferase, C-terminal domain KSO_011580 PF01327 Polypeptide deformylase KSO_011585 PF18074 Primosomal protein N C-terminal domain KSO_011585 PF00271 Helicase conserved C-terminal domain KSO_011585 PF17764 3′ DNA-binding domain (3′BD) KSO_011585 PF04851 Type III restriction enzyme, res subunit KSO_011585 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KSO_011590 PF04127 DNA / pantothenate metabolism flavoprotein KSO_011590 PF02441 Flavoprotein KSO_011595 PF01192 RNA polymerase Rpb6 KSO_011600 PF00625 Guanylate kinase KSO_011605 PF04025 Domain of unknown function (DUF370) KSO_011610 PF03755 YicC-like family, N-terminal region KSO_011610 PF08340 Domain of unknown function (DUF1732) KSO_011615 PF00689 Cation transporting ATPase, C-terminus KSO_011615 PF00690 Cation transporter/ATPase, N-terminus KSO_011630 PF01903 CbiX KSO_011635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KSO_011645 PF01747 ATP-sulfurylase KSO_011645 PF14306 PUA-like domain KSO_011650 PF01384 Phosphate transporter family KSO_011655 PF01507 Phosphoadenosine phosphosulfate reductase family KSO_011665 PF00156 Phosphoribosyl transferase domain KSO_011670 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KSO_011675 PF01180 Dihydroorotate dehydrogenase KSO_011680 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KSO_011680 PF00175 Oxidoreductase NAD-binding domain KSO_011685 PF02142 MGS-like domain KSO_011685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KSO_011685 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KSO_011690 PF00117 Glutamine amidotransferase class-I KSO_011690 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KSO_011695 PF01979 Amidohydrolase family KSO_011700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KSO_011700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KSO_011705 PF00860 Permease family KSO_011710 PF00156 Phosphoribosyl transferase domain KSO_011715 PF01479 S4 domain KSO_011715 PF00849 RNA pseudouridylate synthase KSO_011720 PF01252 Signal peptidase (SPase) II KSO_011725 PF01258 Prokaryotic dksA/traR C4-type zinc finger KSO_011730 PF00133 tRNA synthetases class I (I, L, M and V) KSO_011730 PF08264 Anticodon-binding domain of tRNA KSO_011740 PF05103 DivIVA protein KSO_011745 PF01479 S4 domain KSO_011745 PF17774 Putative RNA-binding domain in YlmH KSO_011750 PF02325 YGGT family KSO_011755 PF04472 Cell division protein SepF KSO_011760 PF01168 Alanine racemase, N-terminal domain KSO_011770 PF05239 PRC-barrel domain KSO_011775 PF01546 Peptidase family M20/M25/M40 KSO_011775 PF07687 Peptidase dimerisation domain KSO_011780 PF00005 ABC transporter KSO_011785 PF04542 Sigma-70 region 2 KSO_011785 PF04539 Sigma-70 region 3 KSO_011785 PF04545 Sigma-70, region 4 KSO_011790 PF04545 Sigma-70, region 4 KSO_011790 PF04542 Sigma-70 region 2 KSO_011795 PF03419 Sporulation factor SpoIIGA KSO_011800 PF05922 Peptidase inhibitor I9 KSO_011800 PF00082 Subtilase family KSO_011805 PF00091 Tubulin/FtsZ family, GTPase domain KSO_011805 PF12327 FtsZ family, C-terminal domain KSO_011810 PF02491 SHS2 domain inserted in FTSA KSO_011815 PF08478 POTRA domain, FtsQ-type KSO_011820 PF01565 FAD binding domain KSO_011820 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KSO_011825 PF04101 Glycosyltransferase family 28 C-terminal domain KSO_011825 PF03033 Glycosyltransferase family 28 N-terminal domain KSO_011830 PF01098 Cell cycle protein KSO_011835 PF02875 Mur ligase family, glutamate ligase domain KSO_011835 PF08245 Mur ligase middle domain KSO_011840 PF00953 Glycosyl transferase family 4 KSO_011840 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KSO_011845 PF01225 Mur ligase family, catalytic domain KSO_011845 PF02875 Mur ligase family, glutamate ligase domain KSO_011845 PF08245 Mur ligase middle domain KSO_011850 PF00905 Penicillin binding protein transpeptidase domain KSO_011850 PF03717 Penicillin-binding Protein dimerisation domain KSO_011850 PF03793 PASTA domain KSO_011865 PF01795 MraW methylase family KSO_011870 PF02381 MraZ protein, putative antitoxin-like KSO_011875 PF10079 Bacillithiol biosynthesis BshC KSO_011880 PF02558 Ketopantoate reductase PanE/ApbA KSO_011880 PF08546 Ketopantoate reductase PanE/ApbA C terminal KSO_011885 PF00583 Acetyltransferase (GNAT) family KSO_011895 PF01783 Ribosomal L32p protein family KSO_011900 PF02620 Large ribosomal RNA subunit accumulation protein YceD KSO_011910 PF05636 HIGH Nucleotidyl Transferase KSO_011915 PF05362 Lon protease (S16) C-terminal proteolytic domain KSO_011915 PF13180 PDZ domain KSO_011920 PF01734 Patatin-like phospholipase KSO_011925 PF07670 Nucleoside recognition KSO_011930 PF01467 Cytidylyltransferase-like KSO_011945 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KSO_011950 PF06133 Control of competence regulator ComK, YlbF/YmcA KSO_011955 PF14003 YlbE-like protein KSO_011960 PF14071 Putative coat protein KSO_011965 PF14504 CAP-associated N-terminal KSO_011965 PF00188 Cysteine-rich secretory protein family KSO_011970 PF00571 CBS domain KSO_011975 PF08868 YugN-like family KSO_011980 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KSO_011985 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KSO_011990 PF00510 Cytochrome c oxidase subunit III KSO_011995 PF00115 Cytochrome C and Quinol oxidase polypeptide I KSO_012000 PF00034 Cytochrome c KSO_012000 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KSO_012000 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KSO_012005 PF01040 UbiA prenyltransferase family KSO_012010 PF02628 Cytochrome oxidase assembly protein KSO_012015 PF02785 Biotin carboxylase C-terminal domain KSO_012015 PF00289 Biotin carboxylase, N-terminal domain KSO_012015 PF00364 Biotin-requiring enzyme KSO_012015 PF00682 HMGL-like KSO_012015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KSO_012015 PF02436 Conserved carboxylase domain KSO_012020 PF01098 Cell cycle protein KSO_012025 PF07408 Protein of unknown function (DUF1507) KSO_012030 PF04960 Glutaminase KSO_012040 PF13638 PIN domain KSO_012040 PF02562 PhoH-like protein KSO_012045 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KSO_012050 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KSO_012055 PF14036 YlaH-like protein KSO_012065 PF17259 Family of unknown function (DUF5325) KSO_012075 PF13490 Putative zinc-finger KSO_012080 PF07504 Fungalysin/Thermolysin Propeptide Motif KSO_012080 PF03413 Peptidase propeptide and YPEB domain KSO_012080 PF01447 Thermolysin metallopeptidase, catalytic domain KSO_012080 PF02868 Thermolysin metallopeptidase, alpha-helical domain KSO_012085 PF00583 Acetyltransferase (GNAT) family KSO_012090 PF00459 Inositol monophosphatase family KSO_012100 PF06335 Protein of unknown function (DUF1054) KSO_012105 PF05256 Uncharacterised protein family (UPF0223) KSO_012115 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KSO_012115 PF01276 Orn/Lys/Arg decarboxylase, major domain KSO_012120 PF13790 SR1 protein KSO_012135 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSO_012135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KSO_012140 PF00364 Biotin-requiring enzyme KSO_012140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KSO_012140 PF02817 e3 binding domain KSO_012145 PF02780 Transketolase, C-terminal domain KSO_012145 PF02779 Transketolase, pyrimidine binding domain KSO_012150 PF00676 Dehydrogenase E1 component KSO_012155 PF00144 Beta-lactamase KSO_012155 PF11954 Domain of unknown function (DUF3471) KSO_012160 PF13193 AMP-binding enzyme C-terminal domain KSO_012160 PF00668 Condensation domain KSO_012160 PF16197 Ketoacyl-synthetase C-terminal extension KSO_012160 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_012160 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_012160 PF08659 KR domain KSO_012160 PF00501 AMP-binding enzyme KSO_012160 PF00550 Phosphopantetheine attachment site KSO_012160 PF14765 Polyketide synthase dehydratase KSO_012165 PF16197 Ketoacyl-synthetase C-terminal extension KSO_012165 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_012165 PF08659 KR domain KSO_012165 PF00550 Phosphopantetheine attachment site KSO_012165 PF14765 Polyketide synthase dehydratase KSO_012165 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_012170 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_012170 PF16197 Ketoacyl-synthetase C-terminal extension KSO_012170 PF08659 KR domain KSO_012170 PF00550 Phosphopantetheine attachment site KSO_012170 PF14765 Polyketide synthase dehydratase KSO_012170 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_012175 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_012175 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_012175 PF08659 KR domain KSO_012175 PF00550 Phosphopantetheine attachment site KSO_012175 PF14765 Polyketide synthase dehydratase KSO_012175 PF16197 Ketoacyl-synthetase C-terminal extension KSO_012180 PF08659 KR domain KSO_012180 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_012180 PF00550 Phosphopantetheine attachment site KSO_012180 PF14765 Polyketide synthase dehydratase KSO_012180 PF16197 Ketoacyl-synthetase C-terminal extension KSO_012180 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_012180 PF00668 Condensation domain KSO_012180 PF13193 AMP-binding enzyme C-terminal domain KSO_012180 PF00501 AMP-binding enzyme KSO_012185 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_012185 PF08659 KR domain KSO_012185 PF14765 Polyketide synthase dehydratase KSO_012185 PF00550 Phosphopantetheine attachment site KSO_012185 PF16197 Ketoacyl-synthetase C-terminal extension KSO_012185 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_012190 PF14765 Polyketide synthase dehydratase KSO_012190 PF00550 Phosphopantetheine attachment site KSO_012190 PF08659 KR domain KSO_012190 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_012190 PF16197 Ketoacyl-synthetase C-terminal extension KSO_012190 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_012190 PF13193 AMP-binding enzyme C-terminal domain KSO_012190 PF00501 AMP-binding enzyme KSO_012190 PF00668 Condensation domain KSO_012195 PF00698 Acyl transferase domain KSO_012200 PF10368 Putative cell-wall binding lipoprotein KSO_012210 PF01327 Polypeptide deformylase KSO_012225 PF00753 Metallo-beta-lactamase superfamily KSO_012225 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KSO_012225 PF17770 Ribonuclease J C-terminal domain KSO_012230 PF01979 Amidohydrolase family KSO_012230 PF13382 Adenine deaminase C-terminal domain KSO_012235 PF02254 TrkA-N domain KSO_012235 PF02080 TrkA-C domain KSO_012240 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KSO_012245 PF00989 PAS fold KSO_012245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_012245 PF00512 His Kinase A (phospho-acceptor) domain KSO_012250 PF18277 AbrB C-terminal domain KSO_012250 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KSO_012260 PF17447 Uncharacterized YkpC-like KSO_012265 PF02073 Thermophilic metalloprotease (M29) KSO_012270 PF02558 Ketopantoate reductase PanE/ApbA KSO_012270 PF08546 Ketopantoate reductase PanE/ApbA C terminal KSO_012275 PF00005 ABC transporter KSO_012275 PF12848 ABC transporter KSO_012285 PF10502 Signal peptidase, peptidase S26 KSO_012290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KSO_012290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KSO_012295 PF00294 pfkB family carbohydrate kinase KSO_012300 PF08220 DeoR-like helix-turn-helix domain KSO_012300 PF00455 DeoR C terminal sensor domain KSO_012305 PF12704 MacB-like periplasmic core domain KSO_012305 PF02687 FtsX-like permease family KSO_012310 PF00005 ABC transporter KSO_012315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KSO_012320 PF04893 Yip1 domain KSO_012325 PF02597 ThiS family KSO_012330 PF02391 MoaE protein KSO_012335 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KSO_012340 PF00994 Probable molybdopterin binding domain KSO_012340 PF03454 MoeA C-terminal region (domain IV) KSO_012340 PF03453 MoeA N-terminal region (domain I and II) KSO_012345 PF00899 ThiF family KSO_012350 PF12804 MobA-like NTP transferase domain KSO_012365 PF00578 AhpC/TSA family KSO_012370 PF00924 Mechanosensitive ion channel KSO_012375 PF03698 Uncharacterised protein family (UPF0180) KSO_012380 PF01546 Peptidase family M20/M25/M40 KSO_012380 PF07687 Peptidase dimerisation domain KSO_012385 PF00132 Bacterial transferase hexapeptide (six repeats) KSO_012385 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KSO_012385 PF14602 Hexapeptide repeat of succinyl-transferase KSO_012390 PF00258 Flavodoxin KSO_012400 PF00258 Flavodoxin KSO_012405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_012405 PF03466 LysR substrate binding domain KSO_012415 PF14156 Antirepressor AbbA KSO_012420 PF04308 Ribonuclease H-like KSO_012425 PF08796 Protein of unknown function (DUF1797) KSO_012430 PF10388 EAL-domain associated signalling protein domain KSO_012430 PF00563 EAL domain KSO_012450 PF00149 Calcineurin-like phosphoesterase KSO_012450 PF10518 TAT (twin-arginine translocation) pathway signal sequence KSO_012455 PF01476 LysM domain KSO_012455 PF03734 L,D-transpeptidase catalytic domain KSO_012460 PF07690 Major Facilitator Superfamily KSO_012465 PF14177 YkyB-like protein KSO_012470 PF00072 Response regulator receiver domain KSO_012470 PF01584 CheW-like domain KSO_012480 PF00155 Aminotransferase class I and II KSO_012485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_012485 PF00512 His Kinase A (phospho-acceptor) domain KSO_012485 PF08447 PAS fold KSO_012485 PF00989 PAS fold KSO_012490 PF00905 Penicillin binding protein transpeptidase domain KSO_012490 PF03717 Penicillin-binding Protein dimerisation domain KSO_012495 PF00188 Cysteine-rich secretory protein family KSO_012500 PF00543 Nitrogen regulatory protein P-II KSO_012510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KSO_012510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KSO_012515 PF02743 Cache domain KSO_012515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSO_012515 PF00672 HAMP domain KSO_012525 PF11132 Transcriptional regulator protein (SplA) KSO_012530 PF02896 PEP-utilising enzyme, TIM barrel domain KSO_012530 PF00391 PEP-utilising enzyme, mobile domain KSO_012530 PF05524 PEP-utilising enzyme, N-terminal KSO_012535 PF00381 PTS HPr component phosphorylation site KSO_012540 PF00367 phosphotransferase system, EIIB KSO_012540 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KSO_012540 PF02378 Phosphotransferase system, EIIC KSO_012545 PF03123 CAT RNA binding domain KSO_012545 PF00874 PRD domain KSO_012550 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KSO_012550 PF00356 Bacterial regulatory proteins, lacI family KSO_012560 PF01321 Creatinase/Prolidase N-terminal domain KSO_012560 PF00557 Metallopeptidase family M24 KSO_012570 PF00578 AhpC/TSA family KSO_012575 PF01943 Polysaccharide biosynthesis protein KSO_012580 PF07486 Cell Wall Hydrolase KSO_012590 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KSO_012595 PF11514 Protein of unknown function (DUF3219) KSO_012600 PF14489 QueF-like protein KSO_012605 PF04055 Radical SAM superfamily KSO_012610 PF01242 6-pyruvoyl tetrahydropterin synthase KSO_012615 PF06508 Queuosine biosynthesis protein QueC KSO_012635 PF00004 ATPase family associated with various cellular activities (AAA) KSO_012635 PF07724 AAA domain (Cdc48 subfamily) KSO_012635 PF10431 C-terminal, D2-small domain, of ClpB protein KSO_012635 PF17871 AAA lid domain KSO_012640 PF01618 MotA/TolQ/ExbB proton channel family KSO_012645 PF00691 OmpA family KSO_012645 PF13677 Membrane MotB of proton-channel complex MotA/MotB KSO_012650 PF01047 MarR family KSO_012655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_012655 PF00512 His Kinase A (phospho-acceptor) domain KSO_012655 PF02743 Cache domain KSO_012660 PF09388 Spo0E like sporulation regulatory protein KSO_012665 PF03079 ARD/ARD' family KSO_012670 PF00596 Class II Aldolase and Adducin N-terminal domain KSO_012680 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KSO_012680 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KSO_012685 PF00155 Aminotransferase class I and II KSO_012690 PF00795 Carbon-nitrogen hydrolase KSO_012695 PF01636 Phosphotransferase enzyme family KSO_012700 PF01008 Initiation factor 2 subunit family KSO_012710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KSO_012710 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KSO_012715 PF00512 His Kinase A (phospho-acceptor) domain KSO_012715 PF00989 PAS fold KSO_012715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_012715 PF13188 PAS domain KSO_012715 PF13426 PAS domain KSO_012720 PF01757 Acyltransferase family KSO_012735 PF02386 Cation transport protein KSO_012740 PF01435 Peptidase family M48 KSO_012745 PF08876 Domain of unknown function (DUF1836) KSO_012750 PF00269 Small, acid-soluble spore proteins, alpha/beta type KSO_012755 PF12791 Anti-sigma factor N-terminus KSO_012760 PF04542 Sigma-70 region 2 KSO_012765 PF03741 Integral membrane protein TerC family KSO_012770 PF09335 SNARE associated Golgi protein KSO_012780 PF02735 Ku70/Ku80 beta-barrel domain KSO_012785 PF01068 ATP dependent DNA ligase domain KSO_012795 PF01047 MarR family KSO_012810 PF13411 MerR HTH family regulatory protein KSO_012815 PF01769 Divalent cation transporter KSO_012815 PF00571 CBS domain KSO_012815 PF03448 MgtE intracellular N domain KSO_012825 PF11132 Transcriptional regulator protein (SplA) KSO_012830 PF01476 LysM domain KSO_012830 PF00704 Glycosyl hydrolases family 18 KSO_012835 PF09819 ABC-type cobalt transport system, permease component KSO_012840 PF00005 ABC transporter KSO_012845 PF02361 Cobalt transport protein KSO_012850 PF01740 STAS domain KSO_012860 PF00082 Subtilase family KSO_012865 PF08267 Cobalamin-independent synthase, N-terminal domain KSO_012865 PF01717 Cobalamin-independent synthase, Catalytic domain KSO_012870 PF00027 Cyclic nucleotide-binding domain KSO_012875 PF12832 MFS_1 like family KSO_012885 PF00535 Glycosyl transferase family 2 KSO_012885 PF13181 Tetratricopeptide repeat KSO_012900 PF02566 OsmC-like protein KSO_012905 PF01047 MarR family KSO_012910 PF02566 OsmC-like protein KSO_012915 PF00171 Aldehyde dehydrogenase family KSO_012920 PF01472 PUA domain KSO_012920 PF00696 Amino acid kinase family KSO_012925 PF01842 ACT domain KSO_012925 PF00551 Formyl transferase KSO_012930 PF00893 Small Multidrug Resistance protein KSO_012935 PF00893 Small Multidrug Resistance protein KSO_012940 PF13302 Acetyltransferase (GNAT) domain KSO_012945 PF03061 Thioesterase superfamily KSO_012955 PF10282 Lactonase, 7-bladed beta-propeller KSO_012960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSO_012960 PF00005 ABC transporter KSO_012965 PF00877 NlpC/P60 family KSO_012970 PF13378 Enolase C-terminal domain-like KSO_012970 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KSO_012975 PF02016 LD-carboxypeptidase N-terminal domain KSO_012975 PF17676 LD-carboxypeptidase C-terminal domain KSO_012980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KSO_012985 PF00005 ABC transporter KSO_012985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSO_012990 PF00528 Binding-protein-dependent transport system inner membrane component KSO_012990 PF12911 N-terminal TM domain of oligopeptide transport permease C KSO_012995 PF00528 Binding-protein-dependent transport system inner membrane component KSO_013000 PF04951 D-aminopeptidase KSO_013005 PF07690 Major Facilitator Superfamily KSO_013010 PF13180 PDZ domain KSO_013020 PF00535 Glycosyl transferase family 2 KSO_013025 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase KSO_013030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSO_013035 PF13520 Amino acid permease KSO_013045 PF01865 Protein of unknown function DUF47 KSO_013050 PF01384 Phosphate transporter family KSO_013055 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KSO_013060 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system KSO_013070 PF01510 N-acetylmuramoyl-L-alanine amidase KSO_013070 PF01476 LysM domain KSO_013070 PF01471 Putative peptidoglycan binding domain KSO_013075 PF04688 SPP1 phage holin KSO_013080 PF10779 Haemolysin XhlA KSO_013090 PF09693 Phage uncharacterised protein (Phage_XkdX) KSO_013110 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) KSO_013115 PF04865 Baseplate J-like protein KSO_013120 PF10934 Protein of unknown function (DUF2634) KSO_013125 PF10844 Protein of unknown function (DUF2577) KSO_013135 PF01476 LysM domain KSO_013140 PF01464 Transglycosylase SLT domain KSO_013140 PF01464 Transglycosylase SLT domain KSO_013140 PF01464 Transglycosylase SLT domain KSO_013150 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC KSO_013155 PF09393 Phage tail tube protein KSO_013160 PF17482 Phage tail sheath C-terminal domain KSO_013160 PF17481 Phage tail sheath protein beta-sandwich domain KSO_013160 PF04984 Phage tail sheath protein subtilisin-like domain KSO_013175 PF04883 Bacteriophage HK97-gp10, putative tail-component KSO_013180 PF12206 Domain of unknown function (DUF3599) KSO_013185 PF11436 Protein of unknown function (DUF3199) KSO_013190 PF05065 Phage capsid family KSO_013195 PF14550 Putative phage serine protease XkdF KSO_013200 PF04860 Phage portal protein KSO_013205 PF04466 Phage terminase large subunit KSO_013205 PF17288 Terminase RNAseH like domain KSO_013210 PF10668 Phage terminase small subunit KSO_013210 PF03592 Terminase small subunit KSO_013215 PF08281 Sigma-70, region 4 KSO_013220 PF17356 Phage-like element PBSX protein XtrA KSO_013235 PF01695 IstB-like ATP binding protein KSO_013250 PF01381 Helix-turn-helix KSO_013255 PF06114 IrrE N-terminal-like domain KSO_013265 PF05908 Poly-gamma-glutamate hydrolase KSO_013270 PF08000 Bacterial PH domain KSO_013275 PF01510 N-acetylmuramoyl-L-alanine amidase KSO_013275 PF01476 LysM domain KSO_013275 PF01471 Putative peptidoglycan binding domain KSO_013285 PF18801 response regulator aspartate phosphatase H, N terminal KSO_013290 PF05163 DinB family KSO_013295 PF01925 Sulfite exporter TauE/SafE KSO_013300 PF13575 Domain of unknown function (DUF4135) KSO_013300 PF05147 Lanthionine synthetase C-like protein KSO_013305 PF00005 ABC transporter KSO_013305 PF00664 ABC transporter transmembrane region KSO_013305 PF03412 Peptidase C39 family KSO_013320 PF00196 Bacterial regulatory proteins, luxR family KSO_013320 PF00072 Response regulator receiver domain KSO_013325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_013325 PF07730 Histidine kinase KSO_013345 PF00005 ABC transporter KSO_013350 PF00672 HAMP domain KSO_013350 PF00512 His Kinase A (phospho-acceptor) domain KSO_013350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_013355 PF00072 Response regulator receiver domain KSO_013355 PF00486 Transcriptional regulatory protein, C terminal KSO_013360 PF08666 SAF domain KSO_013360 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus KSO_013365 PF01232 Mannitol dehydrogenase Rossmann domain KSO_013365 PF08125 Mannitol dehydrogenase C-terminal domain KSO_013370 PF00356 Bacterial regulatory proteins, lacI family KSO_013380 PF02614 Glucuronate isomerase KSO_013385 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSO_013390 PF07849 Protein of unknown function (DUF1641) KSO_013400 PF13536 Putative multidrug resistance efflux transporter KSO_013405 PF00005 ABC transporter KSO_013410 PF03649 Uncharacterised protein family (UPF0014) KSO_013415 PF02602 Uroporphyrinogen-III synthase HemD KSO_013425 PF04101 Glycosyltransferase family 28 C-terminal domain KSO_013430 PF00067 Cytochrome P450 KSO_013435 PF07849 Protein of unknown function (DUF1641) KSO_013440 PF00384 Molybdopterin oxidoreductase KSO_013440 PF01568 Molydopterin dinucleotide binding domain KSO_013440 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KSO_013440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KSO_013440 PF12838 4Fe-4S dicluster domain KSO_013445 PF14172 Domain of unknown function (DUF4309) KSO_013450 PF10990 Protein of unknown function (DUF2809) KSO_013455 PF14070 Putative motility protein KSO_013460 PF02308 MgtC family KSO_013465 PF01047 MarR family KSO_013480 PF08220 DeoR-like helix-turn-helix domain KSO_013480 PF00455 DeoR C terminal sensor domain KSO_013485 PF00232 Glycosyl hydrolase family 1 KSO_013490 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KSO_013495 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KSO_013495 PF02378 Phosphotransferase system, EIIC KSO_013500 PF08544 GHMP kinases C terminal KSO_013500 PF00288 GHMP kinases N terminal domain KSO_013500 PF10509 Galactokinase galactose-binding signature KSO_013505 PF16363 GDP-mannose 4,6 dehydratase KSO_013510 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KSO_013510 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KSO_013515 PF07745 Glycosyl hydrolase family 53 KSO_013520 PF01047 MarR family KSO_013525 PF07690 Major Facilitator Superfamily KSO_013530 PF03992 Antibiotic biosynthesis monooxygenase KSO_013540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSO_013550 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH KSO_013550 PF04740 LXG domain of WXG superfamily KSO_013585 PF01471 Putative peptidoglycan binding domain KSO_013585 PF01476 LysM domain KSO_013585 PF01510 N-acetylmuramoyl-L-alanine amidase KSO_013590 PF05105 Bacteriophage holin family KSO_013640 PF00041 Fibronectin type III domain KSO_013640 PF00704 Glycosyl hydrolases family 18 KSO_013705 PF10668 Phage terminase small subunit KSO_013725 PF08281 Sigma-70, region 4 KSO_013755 PF17356 Phage-like element PBSX protein XtrA KSO_013765 PF05866 Endodeoxyribonuclease RusA KSO_013780 PF01695 IstB-like ATP binding protein KSO_013785 PF07261 Replication initiation and membrane attachment KSO_013815 PF09466 Hypothetical protein Yqai KSO_013820 PF17448 Uncharacterized YqaH-like KSO_013825 PF01381 Helix-turn-helix KSO_013845 PF01381 Helix-turn-helix KSO_013855 PF06114 IrrE N-terminal-like domain KSO_013860 PF00589 Phage integrase family KSO_013860 PF14659 Phage integrase, N-terminal SAM-like domain KSO_013865 PF01053 Cys/Met metabolism PLP-dependent enzyme KSO_013870 PF01053 Cys/Met metabolism PLP-dependent enzyme KSO_013880 PF00756 Putative esterase KSO_013890 PF13673 Acetyltransferase (GNAT) domain KSO_013900 PF00005 ABC transporter KSO_013910 PF00753 Metallo-beta-lactamase superfamily KSO_013920 PF13361 UvrD-like helicase C-terminal domain KSO_013920 PF00580 UvrD/REP helicase N-terminal domain KSO_013925 PF14069 Stage VI sporulation protein F KSO_013940 PF07098 Protein of unknown function (DUF1360) KSO_013945 PF07552 Spore Coat Protein X and V domain KSO_013955 PF07552 Spore Coat Protein X and V domain KSO_013960 PF10612 Spore coat protein Z KSO_013965 PF10612 Spore coat protein Z KSO_013970 PF14153 Spore coat protein CotO KSO_013980 PF08543 Phosphomethylpyrimidine kinase KSO_013985 PF00899 ThiF family KSO_013990 PF05690 Thiazole biosynthesis protein ThiG KSO_013995 PF02597 ThiS family KSO_014000 PF01266 FAD dependent oxidoreductase KSO_014005 PF02581 Thiamine monophosphate synthase KSO_014010 PF03070 TENA/THI-4/PQQC family KSO_014015 PF00999 Sodium/hydrogen exchanger family KSO_014015 PF02080 TrkA-C domain KSO_014015 PF02254 TrkA-N domain KSO_014020 PF00149 Calcineurin-like phosphoesterase KSO_014025 PF00849 RNA pseudouridylate synthase KSO_014030 PF01513 ATP-NAD kinase KSO_014035 PF04607 Region found in RelA / SpoT proteins KSO_014045 PF01928 CYTH domain KSO_014050 PF01464 Transglycosylase SLT domain KSO_014055 PF01152 Bacterial-like globin KSO_014070 PF01432 Peptidase family M3 KSO_014070 PF08439 Oligopeptidase F KSO_014075 PF06054 Competence protein CoiA-like family KSO_014080 PF05389 Negative regulator of genetic competence (MecA) KSO_014085 PF03741 Integral membrane protein TerC family KSO_014090 PF03960 ArsC family KSO_014095 PF13508 Acetyltransferase (GNAT) domain KSO_014105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSO_014105 PF00005 ABC transporter KSO_014110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSO_014110 PF00005 ABC transporter KSO_014115 PF12911 N-terminal TM domain of oligopeptide transport permease C KSO_014115 PF00528 Binding-protein-dependent transport system inner membrane component KSO_014120 PF00528 Binding-protein-dependent transport system inner membrane component KSO_014125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KSO_014130 PF00579 tRNA synthetases class I (W and Y) KSO_014135 PF12227 Protein of unknown function (DUF3603) KSO_014140 PF00528 Binding-protein-dependent transport system inner membrane component KSO_014140 PF12911 N-terminal TM domain of oligopeptide transport permease C KSO_014145 PF00528 Binding-protein-dependent transport system inner membrane component KSO_014150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KSO_014155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSO_014155 PF00005 ABC transporter KSO_014160 PF00005 ABC transporter KSO_014160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSO_014165 PF10026 Predicted Zn-dependent protease (DUF2268) KSO_014170 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_014170 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_014175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KSO_014175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KSO_014185 PF10815 ComZ KSO_014190 PF02608 ABC transporter substrate-binding protein PnrA-like KSO_014210 PF11151 Protein of unknown function (DUF2929) KSO_014215 PF14168 YjzC-like protein KSO_014220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KSO_014220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KSO_014225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KSO_014225 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KSO_014230 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KSO_014230 PF00117 Glutamine amidotransferase class-I KSO_014235 PF00202 Aminotransferase class-III KSO_014240 PF00696 Amino acid kinase family KSO_014245 PF01960 ArgJ family KSO_014250 PF02774 Semialdehyde dehydrogenase, dimerisation domain KSO_014250 PF01118 Semialdehyde dehydrogenase, NAD binding domain KSO_014255 PF07690 Major Facilitator Superfamily KSO_014260 PF01565 FAD binding domain KSO_014265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSO_014270 PF01883 Iron-sulfur cluster assembly protein KSO_014275 PF00326 Prolyl oligopeptidase family KSO_014290 PF12758 Protein of unknown function (DUF3813) KSO_014305 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KSO_014305 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KSO_014310 PF02645 Uncharacterised protein, DegV family COG1307 KSO_014320 PF12729 Four helix bundle sensory module for signal transduction KSO_014320 PF00672 HAMP domain KSO_014320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSO_014330 PF17783 CvfB-like winged helix domain KSO_014330 PF13509 S1 domain KSO_014335 PF04461 Protein of unknown function (DUF520) KSO_014340 PF02219 Methylenetetrahydrofolate reductase KSO_014340 PF02574 Homocysteine S-methyltransferase KSO_014345 PF13673 Acetyltransferase (GNAT) domain KSO_014350 PF13599 Pentapeptide repeats (9 copies) KSO_014355 PF05163 DinB family KSO_014360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KSO_014360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KSO_014365 PF00356 Bacterial regulatory proteins, lacI family KSO_014370 PF02311 AraC-like ligand binding domain KSO_014370 PF12833 Helix-turn-helix domain KSO_014375 PF01554 MatE KSO_014385 PF00733 Asparagine synthase KSO_014385 PF13537 Glutamine amidotransferase domain KSO_014390 PF10949 Protein of unknown function (DUF2777) KSO_014400 PF07457 Protein of unknown function (DUF1516) KSO_014405 PF01557 Fumarylacetoacetate (FAA) hydrolase family KSO_014410 PF09388 Spo0E like sporulation regulatory protein KSO_014415 PF10676 Spore germination protein gerPA/gerPF KSO_014420 PF10803 Spore germination GerPB KSO_014425 PF10737 Spore germination protein GerPC KSO_014435 PF10970 Spore germination protein GerPE KSO_014440 PF10676 Spore germination protein gerPA/gerPF KSO_014450 PF13476 AAA domain KSO_014455 PF12320 Type 5 capsule protein repressor C-terminal domain KSO_014455 PF00149 Calcineurin-like phosphoesterase KSO_014460 PF00580 UvrD/REP helicase N-terminal domain KSO_014460 PF12705 PD-(D/E)XK nuclease superfamily KSO_014460 PF13361 UvrD-like helicase C-terminal domain KSO_014465 PF12705 PD-(D/E)XK nuclease superfamily KSO_014465 PF13361 UvrD-like helicase C-terminal domain KSO_014470 PF04239 Protein of unknown function (DUF421) KSO_014475 PF02915 Rubrerythrin KSO_014480 PF00440 Bacterial regulatory proteins, tetR family KSO_014480 PF08361 MAATS-type transcriptional repressor, C-terminal region KSO_014485 PF07690 Major Facilitator Superfamily KSO_014490 PF05145 Transition state regulatory protein AbrB KSO_014495 PF01047 MarR family KSO_014500 PF01494 FAD binding domain KSO_014505 PF10502 Signal peptidase, peptidase S26 KSO_014510 PF09335 SNARE associated Golgi protein KSO_014520 PF11755 Protein of unknown function (DUF3311) KSO_014525 PF00474 Sodium:solute symporter family KSO_014530 PF01906 Putative heavy-metal-binding KSO_014535 PF05901 Excalibur calcium-binding domain KSO_014540 PF15493 Domain of unknown function, YrpD KSO_014545 PF08818 Domain of unknown function (DU1801) KSO_014555 PF06338 ComK protein KSO_014560 PF08858 IDEAL domain KSO_014570 PF01266 FAD dependent oxidoreductase KSO_014570 PF00355 Rieske [2Fe-2S] domain KSO_014575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSO_014580 PF02632 BioY family KSO_014585 PF13193 AMP-binding enzyme C-terminal domain KSO_014585 PF00501 AMP-binding enzyme KSO_014590 PF00108 Thiolase, N-terminal domain KSO_014590 PF02803 Thiolase, C-terminal domain KSO_014595 PF00300 Histidine phosphatase superfamily (branch 1) KSO_014600 PF01497 Periplasmic binding protein KSO_014610 PF00082 Subtilase family KSO_014610 PF05922 Peptidase inhibitor I9 KSO_014615 PF16491 CAAX prenyl protease N-terminal, five membrane helices KSO_014615 PF01435 Peptidase family M48 KSO_014625 PF13193 AMP-binding enzyme C-terminal domain KSO_014625 PF00501 AMP-binding enzyme KSO_014630 PF13460 NAD(P)H-binding KSO_014635 PF10437 Bacterial lipoate protein ligase C-terminus KSO_014635 PF03099 Biotin/lipoate A/B protein ligase family KSO_014640 PF12706 Beta-lactamase superfamily domain KSO_014645 PF14149 YhfH-like protein KSO_014650 PF00375 Sodium:dicarboxylate symporter family KSO_014655 PF05343 M42 glutamyl aminopeptidase KSO_014665 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KSO_014665 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KSO_014675 PF00440 Bacterial regulatory proteins, tetR family KSO_014675 PF17932 Tetracyclin repressor-like, C-terminal domain KSO_014690 PF01208 Uroporphyrinogen decarboxylase (URO-D) KSO_014695 PF00905 Penicillin binding protein transpeptidase domain KSO_014695 PF00912 Transglycosylase KSO_014700 PF03992 Antibiotic biosynthesis monooxygenase KSO_014710 PF07687 Peptidase dimerisation domain KSO_014710 PF01546 Peptidase family M20/M25/M40 KSO_014715 PF12787 EcsC protein family KSO_014720 PF05975 Bacterial ABC transporter protein EcsB KSO_014725 PF00005 ABC transporter KSO_014730 PF01230 HIT domain KSO_014735 PF00266 Aminotransferase class-V KSO_014740 PF17099 Tryptophan transporter TrpP KSO_014750 PF12732 YtxH-like protein KSO_014755 PF01047 MarR family KSO_014760 PF08963 Protein of unknown function (DUF1878) KSO_014765 PF11667 Putative zincin peptidase KSO_014775 PF09680 Family of unknown function KSO_014785 PF14147 Sporulation protein YhaL KSO_014790 PF01966 HD domain KSO_014795 PF13514 AAA domain KSO_014800 PF00149 Calcineurin-like phosphoesterase KSO_014810 PF13732 Domain of unknown function (DUF4162) KSO_014810 PF00005 ABC transporter KSO_014815 PF14120 YhzD-like protein KSO_014820 PF00378 Enoyl-CoA hydratase/isomerase KSO_014830 PF02080 TrkA-C domain KSO_014835 PF00999 Sodium/hydrogen exchanger family KSO_014840 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KSO_014845 PF04055 Radical SAM superfamily KSO_014855 PF08713 DNA alkylation repair enzyme KSO_014860 PF06133 Control of competence regulator ComK, YlbF/YmcA KSO_014865 PF04286 Protein of unknown function (DUF445) KSO_014870 PF14398 YheC/D like ATP-grasp KSO_014875 PF14398 YheC/D like ATP-grasp KSO_014880 PF17277 Family of unknown function (DUF5342) KSO_014885 PF00269 Small, acid-soluble spore proteins, alpha/beta type KSO_014895 PF13460 NAD(P)H-binding KSO_014900 PF00005 ABC transporter KSO_014900 PF00664 ABC transporter transmembrane region KSO_014905 PF00664 ABC transporter transmembrane region KSO_014905 PF00005 ABC transporter KSO_014910 PF00582 Universal stress protein family KSO_014920 PF13977 BetI-type transcriptional repressor, C-terminal KSO_014920 PF00440 Bacterial regulatory proteins, tetR family KSO_014925 PF01063 Amino-transferase class IV KSO_014930 PF01522 Polysaccharide deacetylase KSO_014935 PF02146 Sir2 family KSO_014940 PF00924 Mechanosensitive ion channel KSO_014945 PF17444 Uncharacterized YhdX-like KSO_014950 PF03009 Glycerophosphoryl diester phosphodiesterase family KSO_014955 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KSO_014960 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KSO_014965 PF00571 CBS domain KSO_014965 PF03471 Transporter associated domain KSO_014965 PF01595 Cyclin M transmembrane N-terminal domain KSO_014970 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_014970 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_014975 PF00155 Aminotransferase class I and II KSO_014980 PF13411 MerR HTH family regulatory protein KSO_014985 PF00571 CBS domain KSO_014985 PF01595 Cyclin M transmembrane N-terminal domain KSO_014985 PF03471 Transporter associated domain KSO_014990 PF01553 Acyltransferase KSO_014995 PF04542 Sigma-70 region 2 KSO_014995 PF08281 Sigma-70, region 4 KSO_015000 PF13800 Sigma factor regulator N-terminal KSO_015000 PF13791 Sigma factor regulator C-terminal KSO_015005 PF17453 Sigma-M inhibitor KSO_015010 PF00209 Sodium:neurotransmitter symporter family KSO_015015 PF13520 Amino acid permease KSO_015025 PF00285 Citrate synthase, C-terminal domain KSO_015030 PF03466 LysR substrate binding domain KSO_015030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_015035 PF01476 LysM domain KSO_015035 PF00877 NlpC/P60 family KSO_015040 PF00245 Alkaline phosphatase KSO_015045 PF04293 SpoVR like protein KSO_015050 PF05552 Conserved TM helix KSO_015055 PF02082 Transcriptional regulator KSO_015060 PF01476 LysM domain KSO_015060 PF00877 NlpC/P60 family KSO_015065 PF13028 Protein of unknown function (DUF3889) KSO_015070 PF14148 YhdB-like protein KSO_015075 PF03358 NADPH-dependent FMN reductase KSO_015080 PF00196 Bacterial regulatory proteins, luxR family KSO_015080 PF00072 Response regulator receiver domain KSO_015085 PF07730 Histidine kinase KSO_015085 PF13185 GAF domain KSO_015090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KSO_015090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KSO_015090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KSO_015090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KSO_015095 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KSO_015095 PF01266 FAD dependent oxidoreductase KSO_015100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KSO_015100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KSO_015105 PF00230 Major intrinsic protein KSO_015110 PF04309 Glycerol-3-phosphate responsive antiterminator KSO_015115 PF00202 Aminotransferase class-III KSO_015120 PF00583 Acetyltransferase (GNAT) family KSO_015120 PF00795 Carbon-nitrogen hydrolase KSO_015125 PF13419 Haloacid dehalogenase-like hydrolase KSO_015130 PF00571 CBS domain KSO_015135 PF17326 Family of unknown function (DUF5365) KSO_015140 PF01479 S4 domain KSO_015140 PF00849 RNA pseudouridylate synthase KSO_015145 PF04203 Sortase domain KSO_015150 PF00149 Calcineurin-like phosphoesterase KSO_015150 PF00565 Staphylococcal nuclease homologue KSO_015150 PF00746 LPXTG cell wall anchor motif KSO_015150 PF02872 5'-nucleotidase, C-terminal domain KSO_015155 PF07875 Coat F domain KSO_015165 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KSO_015175 PF00375 Sodium:dicarboxylate symporter family KSO_015180 PF00990 Diguanylate cyclase, GGDEF domain KSO_015180 PF07694 5TMR of 5TMR-LYT KSO_015185 PF03180 NLPA lipoprotein KSO_015190 PF00313 'Cold-shock' DNA-binding domain KSO_015195 PF12679 ABC-2 family transporter protein KSO_015200 PF00005 ABC transporter KSO_015205 PF00005 ABC transporter KSO_015210 PF00392 Bacterial regulatory proteins, gntR family KSO_015225 PF03358 NADPH-dependent FMN reductase KSO_015230 PF07690 Major Facilitator Superfamily KSO_015240 PF01047 MarR family KSO_015245 PF04285 Protein of unknown function (DUF444) KSO_015250 PF06798 PrkA serine protein kinase C-terminal domain KSO_015250 PF08298 PrkA AAA domain KSO_015265 PF04519 Polymer-forming cytoskeletal KSO_015270 PF13171 Protein of unknown function (DUF4004) KSO_015275 PF00588 SpoU rRNA Methylase family KSO_015280 PF12671 Putative amidase domain KSO_015285 PF08331 Domain of unknown function (DUF1730) KSO_015295 PF01381 Helix-turn-helix KSO_015305 PF00253 Ribosomal protein S14p/S29e KSO_015310 PF00296 Luciferase-like monooxygenase KSO_015315 PF00528 Binding-protein-dependent transport system inner membrane component KSO_015320 PF09084 NMT1/THI5 like KSO_015325 PF00005 ABC transporter KSO_015340 PF00199 Catalase KSO_015340 PF06628 Catalase-related immune-responsive KSO_015345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSO_015345 PF00005 ABC transporter KSO_015350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KSO_015350 PF00005 ABC transporter KSO_015355 PF12911 N-terminal TM domain of oligopeptide transport permease C KSO_015355 PF00528 Binding-protein-dependent transport system inner membrane component KSO_015360 PF00528 Binding-protein-dependent transport system inner membrane component KSO_015365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KSO_015370 PF13040 Fur-regulated basic protein B KSO_015375 PF01565 FAD binding domain KSO_015375 PF08031 Berberine and berberine like KSO_015380 PF13667 ThiC-associated domain KSO_015380 PF01964 Radical SAM ThiC family KSO_015385 PF03575 Peptidase family S51 KSO_015395 PF14540 Nucleotidyltransferase-like KSO_015395 PF18576 Helix-turn-helix domain KSO_015400 PF11023 Zinc-ribbon containing domain KSO_015405 PF01475 Ferric uptake regulator family KSO_015410 PF00578 AhpC/TSA family KSO_015415 PF00202 Aminotransferase class-III KSO_015420 PF06081 Aromatic acid exporter family member 1 KSO_015425 PF00664 ABC transporter transmembrane region KSO_015425 PF00005 ABC transporter KSO_015430 PF04167 Protein of unknown function (DUF402) KSO_015435 PF14182 YgaB-like protein KSO_015440 PF04259 Small, acid-soluble spore protein, gamma-type KSO_015455 PF14815 NUDIX domain KSO_015455 PF00730 HhH-GPD superfamily base excision DNA repair protein KSO_015460 PF04307 LexA-binding, inner membrane-associated putative hydrolase KSO_015465 PF09586 Bacterial membrane protein YfhO KSO_015470 PF00535 Glycosyl transferase family 2 KSO_015475 PF00561 alpha/beta hydrolase fold KSO_015480 PF13630 SdpI/YhfL protein family KSO_015485 PF08239 Bacterial SH3 domain KSO_015490 PF14043 WVELL protein KSO_015495 PF08176 Small acid-soluble spore protein K family KSO_015500 PF00089 Trypsin KSO_015505 PF10794 Protein of unknown function (DUF2606) KSO_015510 PF07690 Major Facilitator Superfamily KSO_015515 PF08838 Protein of unknown function (DUF1811) KSO_015520 PF02631 RecX family KSO_015525 PF01370 NAD dependent epimerase/dehydratase family KSO_015525 PF08338 Domain of unknown function (DUF1731) KSO_015530 PF14152 YfhE-like protein KSO_015535 PF14151 YfhD-like protein KSO_015540 PF00881 Nitroreductase family KSO_015545 PF02567 Phenazine biosynthesis-like protein KSO_015550 PF03706 Lysylphosphatidylglycerol synthase TM region KSO_015550 PF09924 Uncharacterised conserved protein (DUF2156) KSO_015555 PF01047 MarR family KSO_015560 PF07690 Major Facilitator Superfamily KSO_015565 PF12867 DinB superfamily KSO_015570 PF01337 Barstar (barnase inhibitor) KSO_015575 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KSO_015575 PF00391 PEP-utilising enzyme, mobile domain KSO_015580 PF01757 Acyltransferase family KSO_015585 PF02525 Flavodoxin-like fold KSO_015590 PF10400 Virulence activator alpha C-term KSO_015590 PF03551 Transcriptional regulator PadR-like family KSO_015595 PF01040 UbiA prenyltransferase family KSO_015600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSO_015605 PF07681 DoxX KSO_015610 PF00664 ABC transporter transmembrane region KSO_015610 PF00005 ABC transporter KSO_015615 PF00664 ABC transporter transmembrane region KSO_015615 PF00005 ABC transporter KSO_015620 PF02378 Phosphotransferase system, EIIC KSO_015620 PF00367 phosphotransferase system, EIIB KSO_015625 PF01380 SIS domain KSO_015625 PF01418 Helix-turn-helix domain, rpiR family KSO_015630 PF11975 Family 4 glycosyl hydrolase C-terminal domain KSO_015630 PF02056 Family 4 glycosyl hydrolase KSO_015635 PF08141 Small acid-soluble spore protein H family KSO_015640 PF02954 Bacterial regulatory protein, Fis family KSO_015640 PF00158 Sigma-54 interaction domain KSO_015640 PF01590 GAF domain KSO_015645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KSO_015645 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSO_015650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KSO_015650 PF00364 Biotin-requiring enzyme KSO_015650 PF02817 e3 binding domain KSO_015655 PF02780 Transketolase, C-terminal domain KSO_015655 PF02779 Transketolase, pyrimidine binding domain KSO_015660 PF00676 Dehydrogenase E1 component KSO_015670 PF01207 Dihydrouridine synthase (Dus) KSO_015675 PF14118 YfzA-like protein KSO_015680 PF05958 tRNA (Uracil-5-)-methyltransferase KSO_015680 PF01938 TRAM domain KSO_015685 PF00730 HhH-GPD superfamily base excision DNA repair protein KSO_015690 PF01544 CorA-like Mg2+ transporter protein KSO_015700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KSO_015700 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KSO_015705 PF01522 Polysaccharide deacetylase KSO_015715 PF04055 Radical SAM superfamily KSO_015715 PF08756 YfkB-like domain KSO_015720 PF00924 Mechanosensitive ion channel KSO_015725 PF14167 YfkD-like protein KSO_015730 PF01699 Sodium/calcium exchanger protein KSO_015735 PF07690 Major Facilitator Superfamily KSO_015745 PF03631 Virulence factor BrkB KSO_015755 PF01451 Low molecular weight phosphotyrosine protein phosphatase KSO_015760 PF06569 Protein of unknown function (DUF1128) KSO_015765 PF07690 Major Facilitator Superfamily KSO_015770 PF01487 Type I 3-dehydroquinase KSO_015775 PF08501 Shikimate dehydrogenase substrate binding domain KSO_015775 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KSO_015780 PF00356 Bacterial regulatory proteins, lacI family KSO_015785 PF01965 DJ-1/PfpI family KSO_015790 PF00149 Calcineurin-like phosphoesterase KSO_015790 PF02872 5'-nucleotidase, C-terminal domain KSO_015805 PF00881 Nitroreductase family KSO_015810 PF07702 UTRA domain KSO_015810 PF00392 Bacterial regulatory proteins, gntR family KSO_015815 PF16657 Maltogenic Amylase, C-terminal domain KSO_015815 PF00128 Alpha amylase, catalytic domain KSO_015820 PF02378 Phosphotransferase system, EIIC KSO_015820 PF00367 phosphotransferase system, EIIB KSO_015825 PF10676 Spore germination protein gerPA/gerPF KSO_015830 PF10676 Spore germination protein gerPA/gerPF KSO_015835 PF00011 Hsp20/alpha crystallin family KSO_015840 PF09350 Domain of unknown function (DUF1992) KSO_015845 PF00884 Sulfatase KSO_015850 PF10787 Uncharacterised protein from bacillus cereus group KSO_015855 PF02378 Phosphotransferase system, EIIC KSO_015855 PF00367 phosphotransferase system, EIIB KSO_015860 PF00557 Metallopeptidase family M24 KSO_015865 PF11588 Protein of unknown function (DUF3243) KSO_015875 PF11121 Protein of unknown function (DUF2639) KSO_015880 PF03473 MOSC domain KSO_015880 PF03475 3-alpha domain KSO_015885 PF00708 Acylphosphatase KSO_015890 PF02898 Nitric oxide synthase, oxygenase domain KSO_015895 PF00753 Metallo-beta-lactamase superfamily KSO_015900 PF03600 Citrate transporter KSO_015905 PF03401 Tripartite tricarboxylate transporter family receptor KSO_015910 PF12431 Transcriptional regulator KSO_015910 PF00072 Response regulator receiver domain KSO_015910 PF08279 HTH domain KSO_015915 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KSO_015915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_015920 PF04203 Sortase domain KSO_015930 PF04397 LytTr DNA-binding domain KSO_015930 PF00072 Response regulator receiver domain KSO_015935 PF06580 Histidine kinase KSO_015935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_015955 PF00939 Sodium:sulfate symporter transmembrane region KSO_015960 PF00544 Pectate lyase KSO_015965 PF11181 Heat induced stress protein YflT KSO_015970 PF11486 Protein of unknown function (DUF3212) KSO_015975 PF00107 Zinc-binding dehydrogenase KSO_015975 PF16884 N-terminal domain of oxidoreductase KSO_015985 PF00583 Acetyltransferase (GNAT) family KSO_015990 PF00271 Helicase conserved C-terminal domain KSO_015990 PF00270 DEAD/DEAH box helicase KSO_015995 PF12848 ABC transporter KSO_015995 PF00005 ABC transporter KSO_016000 PF07690 Major Facilitator Superfamily KSO_016005 PF13411 MerR HTH family regulatory protein KSO_016010 PF16326 ABC transporter C-terminal domain KSO_016010 PF00005 ABC transporter KSO_016010 PF12848 ABC transporter KSO_016015 PF00535 Glycosyl transferase family 2 KSO_016015 PF13181 Tetratricopeptide repeat KSO_016025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KSO_016030 PF00171 Aldehyde dehydrogenase family KSO_016035 PF13520 Amino acid permease KSO_016040 PF07690 Major Facilitator Superfamily KSO_016045 PF03407 Nucleotide-diphospho-sugar transferase KSO_016050 PF00535 Glycosyl transferase family 2 KSO_016055 PF03407 Nucleotide-diphospho-sugar transferase KSO_016060 PF16363 GDP-mannose 4,6 dehydratase KSO_016065 PF00483 Nucleotidyl transferase KSO_016070 PF00884 Sulfatase KSO_016080 PF00667 FAD binding domain KSO_016080 PF00067 Cytochrome P450 KSO_016080 PF00258 Flavodoxin KSO_016080 PF00175 Oxidoreductase NAD-binding domain KSO_016085 PF13039 Protein of unknown function (DUF3900) KSO_016085 PF13037 Domain of unknown function (DUF3898) KSO_016090 PF01494 FAD binding domain KSO_016095 PF01047 MarR family KSO_016100 PF01027 Inhibitor of apoptosis-promoting Bax1 KSO_016105 PF01687 Riboflavin kinase KSO_016110 PF10055 Uncharacterized small protein (DUF2292) KSO_016115 PF01740 STAS domain KSO_016115 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain KSO_016120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSO_016125 PF03992 Antibiotic biosynthesis monooxygenase KSO_016130 PF04239 Protein of unknown function (DUF421) KSO_016140 PF00583 Acetyltransferase (GNAT) family KSO_016145 PF05067 Manganese containing catalase KSO_016150 PF12652 CotJB protein KSO_016155 PF11007 Spore coat associated protein JA (CotJA) KSO_016160 PF04439 Streptomycin adenylyltransferase KSO_016170 PF01709 Transcriptional regulator KSO_016175 PF18593 CdiI immunity protein KSO_016180 PF04740 LXG domain of WXG superfamily KSO_016185 PF04634 Protein of unknown function, DUF600 KSO_016195 PF00005 ABC transporter KSO_016205 PF05958 tRNA (Uracil-5-)-methyltransferase KSO_016205 PF01938 TRAM domain KSO_016210 PF00781 Diacylglycerol kinase catalytic domain KSO_016215 PF00873 AcrB/AcrD/AcrF family KSO_016220 PF00440 Bacterial regulatory proteins, tetR family KSO_016225 PF02637 GatB domain KSO_016225 PF02934 GatB/GatE catalytic domain KSO_016230 PF01425 Amidase KSO_016235 PF02686 Glu-tRNAGln amidotransferase C subunit KSO_016240 PF00474 Sodium:solute symporter family KSO_016245 PF02308 MgtC family KSO_016250 PF01636 Phosphotransferase enzyme family KSO_016255 PF07537 CamS sex pheromone cAM373 precursor KSO_016260 PF03120 NAD-dependent DNA ligase OB-fold domain KSO_016260 PF01653 NAD-dependent DNA ligase adenylation domain KSO_016260 PF00533 BRCA1 C Terminus (BRCT) domain KSO_016260 PF12826 Helix-hairpin-helix motif KSO_016260 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KSO_016265 PF13361 UvrD-like helicase C-terminal domain KSO_016265 PF00580 UvrD/REP helicase N-terminal domain KSO_016270 PF01884 PcrB family KSO_016280 PF01645 Conserved region in glutamate synthase KSO_016285 PF01371 Trp repressor protein KSO_016290 PF11258 Protein of unknown function (DUF3048) N-terminal domain KSO_016290 PF17479 Protein of unknown function (DUF3048) C-terminal domain KSO_016295 PF13382 Adenine deaminase C-terminal domain KSO_016295 PF01979 Amidohydrolase family KSO_016300 PF11127 Protein of unknown function (DUF2892) KSO_016305 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KSO_016305 PF02844 Phosphoribosylglycinamide synthetase, N domain KSO_016305 PF02843 Phosphoribosylglycinamide synthetase, C domain KSO_016310 PF01808 AICARFT/IMPCHase bienzyme KSO_016310 PF02142 MGS-like domain KSO_016315 PF00551 Formyl transferase KSO_016320 PF02769 AIR synthase related protein, C-terminal domain KSO_016320 PF00586 AIR synthase related protein, N-terminal domain KSO_016325 PF00156 Phosphoribosyl transferase domain KSO_016330 PF00586 AIR synthase related protein, N-terminal domain KSO_016330 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KSO_016330 PF02769 AIR synthase related protein, C-terminal domain KSO_016340 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KSO_016345 PF01259 SAICAR synthetase KSO_016350 PF00206 Lyase KSO_016350 PF10397 Adenylosuccinate lyase C-terminus KSO_016355 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KSO_016355 PF02222 ATP-grasp domain KSO_016360 PF00731 AIR carboxylase KSO_016365 PF14044 NETI protein KSO_016370 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KSO_016375 PF13076 Fur-regulated basic protein A KSO_016380 PF00860 Permease family KSO_016390 PF04542 Sigma-70 region 2 KSO_016390 PF04545 Sigma-70, region 4 KSO_016395 PF00958 GMP synthase C terminal domain KSO_016395 PF02540 NAD synthase KSO_016395 PF00117 Glutamine amidotransferase class-I KSO_016400 PF13559 Domain of unknown function (DUF4129) KSO_016400 PF01841 Transglutaminase-like superfamily KSO_016400 PF11992 Domain of unknown function (DUF3488) KSO_016405 PF01882 Protein of unknown function DUF58 KSO_016410 PF07726 ATPase family associated with various cellular activities (AAA) KSO_016410 PF17863 AAA lid domain KSO_016415 PF00324 Amino acid permease KSO_016420 PF07732 Multicopper oxidase KSO_016420 PF07731 Multicopper oxidase KSO_016420 PF00394 Multicopper oxidase KSO_016425 PF14169 Cold-inducible protein YdjO KSO_016435 PF07676 WD40-like Beta Propeller Repeat KSO_016440 PF03330 Lytic transglycolase KSO_016445 PF08240 Alcohol dehydrogenase GroES-like domain KSO_016445 PF00107 Zinc-binding dehydrogenase KSO_016450 PF04542 Sigma-70 region 2 KSO_016450 PF08281 Sigma-70, region 4 KSO_016455 PF13739 Deacetylase PdaC KSO_016455 PF11738 Protein of unknown function (DUF3298) KSO_016460 PF01757 Acyltransferase family KSO_016465 PF13421 SPFH domain-Band 7 family KSO_016470 PF04536 TPM domain KSO_016475 PF08271 TFIIB zinc-binding KSO_016480 PF04012 PspA/IM30 family KSO_016485 PF14154 Domain of unknown function (DUF4306) KSO_016490 PF00294 pfkB family carbohydrate kinase KSO_016500 PF00107 Zinc-binding dehydrogenase KSO_016500 PF08240 Alcohol dehydrogenase GroES-like domain KSO_016505 PF00931 NB-ARC domain KSO_016505 PF13176 Tetratricopeptide repeat KSO_016525 PF08924 Domain of unknown function (DUF1906) KSO_016525 PF01471 Putative peptidoglycan binding domain KSO_016530 PF00118 TCP-1/cpn60 chaperonin family KSO_016535 PF00166 Chaperonin 10 Kd subunit KSO_016540 PF02517 CPBP intramembrane metalloprotease KSO_016545 PF14146 Domain of unknown function (DUF4305) KSO_016550 PF00902 Sec-independent protein translocase protein (TatC) KSO_016555 PF02416 mttA/Hcf106 family KSO_016560 PF02629 CoA binding domain KSO_016560 PF06971 Putative DNA-binding protein N-terminus KSO_016565 PF01967 MoaC family KSO_016570 PF00005 ABC transporter KSO_016570 PF16326 ABC transporter C-terminal domain KSO_016570 PF12848 ABC transporter KSO_016575 PF00814 Glycoprotease family KSO_016580 PF00583 Acetyltransferase (GNAT) family KSO_016585 PF00814 Glycoprotease family KSO_016590 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KSO_016595 PF02769 AIR synthase related protein, C-terminal domain KSO_016595 PF00586 AIR synthase related protein, N-terminal domain KSO_016600 PF00083 Sugar (and other) transporter KSO_016605 PF00107 Zinc-binding dehydrogenase KSO_016605 PF08240 Alcohol dehydrogenase GroES-like domain KSO_016610 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KSO_016620 PF13520 Amino acid permease KSO_016625 PF00440 Bacterial regulatory proteins, tetR family KSO_016625 PF17934 Tetracyclin repressor-like, C-terminal domain KSO_016630 PF00893 Small Multidrug Resistance protein KSO_016635 PF00893 Small Multidrug Resistance protein KSO_016640 PF07690 Major Facilitator Superfamily KSO_016645 PF00392 Bacterial regulatory proteins, gntR family KSO_016645 PF07729 FCD domain KSO_016650 PF07702 UTRA domain KSO_016650 PF00392 Bacterial regulatory proteins, gntR family KSO_016655 PF07690 Major Facilitator Superfamily KSO_016660 PF07563 Protein of unknown function (DUF1541) KSO_016690 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KSO_016695 PF00392 Bacterial regulatory proteins, gntR family KSO_016695 PF07729 FCD domain KSO_016700 PF00180 Isocitrate/isopropylmalate dehydrogenase KSO_016705 PF00561 alpha/beta hydrolase fold KSO_016710 PF00293 NUDIX domain KSO_016715 PF00892 EamA-like transporter family KSO_016720 PF06445 GyrI-like small molecule binding domain KSO_016720 PF13411 MerR HTH family regulatory protein KSO_016725 PF00583 Acetyltransferase (GNAT) family KSO_016730 PF01925 Sulfite exporter TauE/SafE KSO_016740 PF00109 Beta-ketoacyl synthase, N-terminal domain KSO_016740 PF02801 Beta-ketoacyl synthase, C-terminal domain KSO_016745 PF07690 Major Facilitator Superfamily KSO_016750 PF00465 Iron-containing alcohol dehydrogenase KSO_016755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KSO_016755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KSO_016760 PF13302 Acetyltransferase (GNAT) domain KSO_016770 PF07722 Peptidase C26 KSO_016775 PF03176 MMPL family KSO_016780 PF00196 Bacterial regulatory proteins, luxR family KSO_016780 PF00072 Response regulator receiver domain KSO_016785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_016785 PF07730 Histidine kinase KSO_016800 PF07875 Coat F domain KSO_016805 PF00107 Zinc-binding dehydrogenase KSO_016805 PF13823 Alcohol dehydrogenase GroES-associated KSO_016805 PF08240 Alcohol dehydrogenase GroES-like domain KSO_016815 PF07875 Coat F domain KSO_016820 PF00440 Bacterial regulatory proteins, tetR family KSO_016820 PF16859 Tetracyclin repressor-like, C-terminal domain KSO_016825 PF07690 Major Facilitator Superfamily KSO_016840 PF00155 Aminotransferase class I and II KSO_016840 PF00392 Bacterial regulatory proteins, gntR family KSO_016850 PF13411 MerR HTH family regulatory protein KSO_016855 PF08240 Alcohol dehydrogenase GroES-like domain KSO_016855 PF00107 Zinc-binding dehydrogenase KSO_016870 PF04055 Radical SAM superfamily KSO_016880 PF00701 Dihydrodipicolinate synthetase family KSO_016890 PF00583 Acetyltransferase (GNAT) family KSO_016905 PF16916 Dimerisation domain of Zinc Transporter KSO_016905 PF01545 Cation efflux family KSO_016920 PF01565 FAD binding domain KSO_016920 PF08031 Berberine and berberine like KSO_016935 PF00293 NUDIX domain KSO_016940 PF07690 Major Facilitator Superfamily KSO_016945 PF00392 Bacterial regulatory proteins, gntR family KSO_016945 PF00155 Aminotransferase class I and II KSO_016950 PF07687 Peptidase dimerisation domain KSO_016950 PF01546 Peptidase family M20/M25/M40 KSO_016955 PF12833 Helix-turn-helix domain KSO_016955 PF02311 AraC-like ligand binding domain KSO_016960 PF01546 Peptidase family M20/M25/M40 KSO_016960 PF07687 Peptidase dimerisation domain KSO_016970 PF01042 Endoribonuclease L-PSP KSO_016975 PF07729 FCD domain KSO_016975 PF00392 Bacterial regulatory proteins, gntR family KSO_016980 PF00291 Pyridoxal-phosphate dependent enzyme KSO_016990 PF01734 Patatin-like phospholipase KSO_017005 PF01177 Asp/Glu/Hydantoin racemase KSO_017010 PF01925 Sulfite exporter TauE/SafE KSO_017015 PF01206 Sulfurtransferase TusA KSO_017020 PF00753 Metallo-beta-lactamase superfamily KSO_017020 PF00581 Rhodanese-like domain KSO_017025 PF01206 Sulfurtransferase TusA KSO_017025 PF00581 Rhodanese-like domain KSO_017035 PF13686 DsrE/DsrF/DrsH-like family KSO_017040 PF02583 Metal-sensitive transcriptional repressor KSO_017045 PF00313 'Cold-shock' DNA-binding domain KSO_017050 PF13460 NAD(P)H-binding KSO_017055 PF02082 Transcriptional regulator KSO_017065 PF01575 MaoC like domain KSO_017070 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) KSO_017075 PF01047 MarR family KSO_017080 PF02566 OsmC-like protein KSO_017085 PF07859 alpha/beta hydrolase fold KSO_017090 PF07690 Major Facilitator Superfamily KSO_017100 PF00561 alpha/beta hydrolase fold KSO_017105 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH KSO_017105 PF04740 LXG domain of WXG superfamily KSO_017145 PF10263 SprT-like family KSO_017155 PF16921 Tex protein YqgF-like domain KSO_017155 PF17674 HHH domain KSO_017155 PF00575 S1 RNA binding domain KSO_017155 PF09371 Tex-like protein N-terminal domain KSO_017160 PF07228 Stage II sporulation protein E (SpoIIE) KSO_017165 PF04539 Sigma-70 region 3 KSO_017165 PF04542 Sigma-70 region 2 KSO_017165 PF04545 Sigma-70, region 4 KSO_017170 PF13581 Histidine kinase-like ATPase domain KSO_017175 PF01740 STAS domain KSO_017180 PF07228 Stage II sporulation protein E (SpoIIE) KSO_017180 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain KSO_017185 PF13581 Histidine kinase-like ATPase domain KSO_017190 PF01740 STAS domain KSO_017195 PF01740 STAS domain KSO_017195 PF08678 Rsbr N terminal KSO_017200 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KSO_017205 PF01402 Ribbon-helix-helix protein, copG family KSO_017210 PF00842 Alanine racemase, C-terminal domain KSO_017210 PF01168 Alanine racemase, N-terminal domain KSO_017220 PF01648 4'-phosphopantetheinyl transferase superfamily KSO_017225 PF01694 Rhomboid family KSO_017230 PF03703 Bacterial PH domain KSO_017235 PF03703 Bacterial PH domain KSO_017240 PF00271 Helicase conserved C-terminal domain KSO_017240 PF00270 DEAD/DEAH box helicase KSO_017250 PF01225 Mur ligase family, catalytic domain KSO_017250 PF02875 Mur ligase family, glutamate ligase domain KSO_017250 PF08245 Mur ligase middle domain KSO_017255 PF01820 D-ala D-ala ligase N-terminus KSO_017255 PF07478 D-ala D-ala ligase C-terminus KSO_017260 PF00085 Thioredoxin KSO_017265 PF01545 Cation efflux family KSO_017265 PF16916 Dimerisation domain of Zinc Transporter KSO_017275 PF13040 Fur-regulated basic protein B KSO_017280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KSO_017280 PF02770 Acyl-CoA dehydrogenase, middle domain KSO_017280 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KSO_017295 PF00005 ABC transporter KSO_017300 PF01594 AI-2E family transporter KSO_017305 PF00375 Sodium:dicarboxylate symporter family KSO_017310 PF08279 HTH domain KSO_017310 PF00072 Response regulator receiver domain KSO_017315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_017315 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KSO_017315 PF17203 Single cache domain 3 KSO_017320 PF03480 Bacterial extracellular solute-binding protein, family 7 KSO_017325 PF05067 Manganese containing catalase KSO_017330 PF16291 Domain of unknown function (DUF4937 KSO_017335 PF07883 Cupin domain KSO_017340 PF00477 Small hydrophilic plant seed protein KSO_017340 PF10685 Stress-induced bacterial acidophilic repeat motif KSO_017345 PF12787 EcsC protein family KSO_017350 PF00893 Small Multidrug Resistance protein KSO_017355 PF17314 Family of unknown function (DUF5360) KSO_017360 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) KSO_017370 PF01566 Natural resistance-associated macrophage protein KSO_017400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KSO_017400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KSO_017400 PF00205 Thiamine pyrophosphate enzyme, central domain KSO_017405 PF00293 NUDIX domain KSO_017410 PF13520 Amino acid permease KSO_017415 PF03170 Bacterial cellulose synthase subunit KSO_017425 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KSO_017430 PF00990 Diguanylate cyclase, GGDEF domain KSO_017440 PF01131 DNA topoisomerase KSO_017440 PF01751 Toprim domain KSO_017445 PF01037 Lrp/AsnC ligand binding domain KSO_017450 PF12823 Domain of unknown function (DUF3817) KSO_017455 PF10997 Alternate to MurJ KSO_017460 PF16242 Pyridoxamine 5'-phosphate oxidase like KSO_017465 PF13302 Acetyltransferase (GNAT) domain KSO_017480 PF13193 AMP-binding enzyme C-terminal domain KSO_017480 PF00501 AMP-binding enzyme KSO_017485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KSO_017485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KSO_017485 PF05043 Mga helix-turn-helix domain KSO_017485 PF00874 PRD domain KSO_017485 PF08279 HTH domain KSO_017490 PF00248 Aldo/keto reductase family KSO_017495 PF05223 NTF2-like N-terminal transpeptidase domain KSO_017495 PF00905 Penicillin binding protein transpeptidase domain KSO_017495 PF03717 Penicillin-binding Protein dimerisation domain KSO_017500 PF03992 Antibiotic biosynthesis monooxygenase KSO_017505 PF13129 Protein of unknown function (DUF3953) KSO_017510 PF13472 GDSL-like Lipase/Acylhydrolase family KSO_017515 PF01614 Bacterial transcriptional regulator KSO_017515 PF09339 IclR helix-turn-helix domain KSO_017520 PF02626 Carboxyltransferase domain, subdomain A and B KSO_017525 PF02682 Carboxyltransferase domain, subdomain C and D KSO_017530 PF07286 Protein of unknown function (DUF1445) KSO_017535 PF01566 Natural resistance-associated macrophage protein KSO_017540 PF03746 LamB/YcsF family KSO_017555 PF07977 FabA-like domain KSO_017560 PF08125 Mannitol dehydrogenase C-terminal domain KSO_017560 PF01232 Mannitol dehydrogenase Rossmann domain KSO_017565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KSO_017570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KSO_017570 PF02378 Phosphotransferase system, EIIC KSO_017580 PF08220 DeoR-like helix-turn-helix domain KSO_017580 PF05573 NosL KSO_017585 PF05425 Copper resistance protein D KSO_017585 PF13115 YtkA-like KSO_017585 PF04234 CopC domain KSO_017590 PF07987 Domain of unkown function (DUF1775) KSO_017600 PF06800 Sugar transport protein KSO_017610 PF00171 Aldehyde dehydrogenase family KSO_017615 PF00202 Aminotransferase class-III KSO_017620 PF00155 Aminotransferase class I and II KSO_017620 PF00392 Bacterial regulatory proteins, gntR family KSO_017625 PF01022 Bacterial regulatory protein, arsR family KSO_017630 PF03992 Antibiotic biosynthesis monooxygenase KSO_017635 PF00881 Nitroreductase family KSO_017640 PF00440 Bacterial regulatory proteins, tetR family KSO_017645 PF07690 Major Facilitator Superfamily KSO_017650 PF01497 Periplasmic binding protein KSO_017655 PF00005 ABC transporter KSO_017660 PF01032 FecCD transport family KSO_017665 PF01032 FecCD transport family KSO_017670 PF00696 Amino acid kinase family KSO_017670 PF13840 ACT domain KSO_017675 PF11131 Rap-phr extracellular signalling KSO_017680 PF18801 response regulator aspartate phosphatase H, N terminal KSO_017690 PF00512 His Kinase A (phospho-acceptor) domain KSO_017690 PF00672 HAMP domain KSO_017690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_017695 PF00486 Transcriptional regulatory protein, C terminal KSO_017695 PF00072 Response regulator receiver domain KSO_017700 PF02687 FtsX-like permease family KSO_017700 PF12704 MacB-like periplasmic core domain KSO_017705 PF00005 ABC transporter KSO_017710 PF03972 MmgE/PrpD family KSO_017720 PF00005 ABC transporter KSO_017725 PF00528 Binding-protein-dependent transport system inner membrane component KSO_017730 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSO_017745 PF03845 Spore germination protein KSO_017750 PF05504 Spore germination B3/ GerAC like, C-terminal KSO_017755 PF03323 Bacillus/Clostridium GerA spore germination protein KSO_017765 PF12708 Pectate lyase superfamily protein KSO_017765 PF13229 Right handed beta helix region KSO_017770 PF00854 POT family KSO_017785 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KSO_017790 PF02441 Flavoprotein KSO_017795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KSO_017795 PF03466 LysR substrate binding domain KSO_017800 PF00497 Bacterial extracellular solute-binding proteins, family 3 KSO_017805 PF00528 Binding-protein-dependent transport system inner membrane component KSO_017810 PF00005 ABC transporter KSO_017820 PF01648 4'-phosphopantetheinyl transferase superfamily KSO_017825 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KSO_017825 PF07685 CobB/CobQ-like glutamine amidotransferase domain KSO_017825 PF00155 Aminotransferase class I and II KSO_017835 PF00975 Thioesterase domain KSO_017840 PF00550 Phosphopantetheine attachment site KSO_017840 PF00668 Condensation domain KSO_017840 PF13193 AMP-binding enzyme C-terminal domain KSO_017840 PF00501 AMP-binding enzyme KSO_017840 PF00975 Thioesterase domain KSO_017845 PF13193 AMP-binding enzyme C-terminal domain KSO_017845 PF00501 AMP-binding enzyme KSO_017845 PF00668 Condensation domain KSO_017845 PF00550 Phosphopantetheine attachment site KSO_017850 PF01638 HxlR-like helix-turn-helix KSO_017855 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KSO_017860 PF01380 SIS domain KSO_017865 PF14040 Deoxyribonuclease NucA/NucB KSO_017870 PF11033 Competence protein J (ComJ) KSO_017875 PF00232 Glycosyl hydrolase family 1 KSO_017880 PF00232 Glycosyl hydrolase family 1 KSO_017885 PF10925 Protein of unknown function (DUF2680) KSO_017890 PF06271 RDD family KSO_017895 PF00107 Zinc-binding dehydrogenase KSO_017895 PF13823 Alcohol dehydrogenase GroES-associated KSO_017895 PF08240 Alcohol dehydrogenase GroES-like domain KSO_017900 PF07683 Cobalamin synthesis protein cobW C-terminal domain KSO_017900 PF02492 CobW/HypB/UreG, nucleotide-binding domain KSO_017905 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KSO_017905 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSO_017905 PF04324 BFD-like [2Fe-2S] binding domain KSO_017905 PF18267 Rubredoxin NAD+ reductase C-terminal domain KSO_017905 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KSO_017910 PF00355 Rieske [2Fe-2S] domain KSO_017915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KSO_017920 PF07992 Pyridine nucleotide-disulphide oxidoreductase KSO_017925 PF17853 GGDEF-like domain KSO_017925 PF13556 PucR C-terminal helix-turn-helix domain KSO_017930 PF00474 Sodium:solute symporter family KSO_017935 PF00171 Aldehyde dehydrogenase family KSO_017940 PF01619 Proline dehydrogenase KSO_017945 PF10127 RNA repair pathway DNA polymerase beta family KSO_017950 PF05448 Acetyl xylan esterase (AXE1) KSO_017955 PF01202 Shikimate kinase KSO_017960 PF07690 Major Facilitator Superfamily KSO_017975 PF12197 Bacillus cereus group antimicrobial protein KSO_017980 PF02540 NAD synthase KSO_017985 PF09347 Domain of unknown function (DUF1989) KSO_017990 PF00324 Amino acid permease KSO_017995 PF08892 YqcI/YcgG family KSO_018000 PF01810 LysE type translocator KSO_018005 PF01047 MarR family KSO_018010 PF07690 Major Facilitator Superfamily KSO_018015 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KSO_018015 PF00056 lactate/malate dehydrogenase, NAD binding domain KSO_018020 PF16738 Starch-binding module 26 KSO_018020 PF00128 Alpha amylase, catalytic domain KSO_018030 PF03606 C4-dicarboxylate anaerobic carrier KSO_018035 PF07687 Peptidase dimerisation domain KSO_018035 PF01546 Peptidase family M20/M25/M40 KSO_018040 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KSO_018045 PF00528 Binding-protein-dependent transport system inner membrane component KSO_018050 PF00005 ABC transporter KSO_018050 PF00571 CBS domain KSO_018055 PF07690 Major Facilitator Superfamily KSO_018060 PF05816 Toxic anion resistance protein (TelA) KSO_018065 PF14266 Putative component of 'biosynthetic module' KSO_018070 PF03741 Integral membrane protein TerC family KSO_018075 PF02342 TerD domain KSO_018080 PF02342 TerD domain KSO_018085 PF02342 TerD domain KSO_018090 PF00296 Luciferase-like monooxygenase KSO_018095 PF00950 ABC 3 transport family KSO_018100 PF00005 ABC transporter KSO_018105 PF01297 Zinc-uptake complex component A periplasmic KSO_018110 PF00128 Alpha amylase, catalytic domain KSO_018120 PF18801 response regulator aspartate phosphatase H, N terminal KSO_018125 PF13539 D-alanyl-D-alanine carboxypeptidase KSO_018130 PF16244 Domain of unknown function (DUF4901) KSO_018135 PF16244 Domain of unknown function (DUF4901) KSO_018140 PF11611 Domain of unknown function (DUF4352) KSO_018140 PF17118 Domain of unknown function (DUF5105) KSO_018145 PF00248 Aldo/keto reductase family KSO_018150 PF02810 SEC-C motif KSO_018150 PF05225 helix-turn-helix, Psq domain KSO_018155 PF01674 Lipase (class 2) KSO_018170 PF00440 Bacterial regulatory proteins, tetR family KSO_018175 PF07690 Major Facilitator Superfamily KSO_018180 PF00266 Aminotransferase class-V KSO_018185 PF01470 Pyroglutamyl peptidase KSO_018190 PF00902 Sec-independent protein translocase protein (TatC) KSO_018195 PF02416 mttA/Hcf106 family KSO_018200 PF09423 PhoD-like phosphatase KSO_018200 PF16655 PhoD-like phosphatase, N-terminal domain KSO_018205 PF07486 Cell Wall Hydrolase KSO_018210 PF10710 Protein of unknown function (DUF2512) KSO_018215 PF00085 Thioredoxin KSO_018220 PF07681 DoxX KSO_018225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KSO_018230 PF00881 Nitroreductase family KSO_018235 PF16916 Dimerisation domain of Zinc Transporter KSO_018235 PF01545 Cation efflux family KSO_018240 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein KSO_018245 PF01636 Phosphotransferase enzyme family KSO_018250 PF00072 Response regulator receiver domain KSO_018250 PF08664 YcbB domain KSO_018255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_018260 PF04960 Glutaminase KSO_018265 PF01235 Sodium:alanine symporter family KSO_018270 PF02574 Homocysteine S-methyltransferase KSO_018275 PF00324 Amino acid permease KSO_018280 PF01063 Amino-transferase class IV KSO_018285 PF00375 Sodium:dicarboxylate symporter family KSO_018300 PF02666 Phosphatidylserine decarboxylase KSO_018305 PF09335 SNARE associated Golgi protein KSO_018310 PF01066 CDP-alcohol phosphatidyltransferase KSO_018315 PF02222 ATP-grasp domain KSO_018320 PF00465 Iron-containing alcohol dehydrogenase KSO_018335 PF01471 Putative peptidoglycan binding domain KSO_018335 PF08924 Domain of unknown function (DUF1906) KSO_018345 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal KSO_018345 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal KSO_018350 PF10852 Protein of unknown function (DUF2651) KSO_018355 PF07690 Major Facilitator Superfamily KSO_018360 PF03009 Glycerophosphoryl diester phosphodiesterase family KSO_018365 PF10852 Protein of unknown function (DUF2651) KSO_018375 PF13520 Amino acid permease KSO_018390 PF17334 Minor curli fiber component A KSO_018395 PF16219 Domain of unknown function (DUF4879) KSO_018415 PF00005 ABC transporter KSO_018420 PF00196 Bacterial regulatory proteins, luxR family KSO_018420 PF00072 Response regulator receiver domain KSO_018425 PF07730 Histidine kinase KSO_018430 PF13419 Haloacid dehalogenase-like hydrolase KSO_018435 PF00324 Amino acid permease KSO_018440 PF01047 MarR family KSO_018445 PF03788 LrgA family KSO_018450 PF04172 LrgB-like family KSO_018455 PF00248 Aldo/keto reductase family KSO_018460 PF16226 Domain of unknown function (DUF4885) KSO_018465 PF01555 DNA methylase KSO_018485 PF01380 SIS domain KSO_018490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KSO_018490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KSO_018490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KSO_018490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KSO_018495 PF07949 YbbR-like protein KSO_018500 PF02457 DisA bacterial checkpoint controller nucleotide-binding KSO_018505 PF13490 Putative zinc-finger KSO_018510 PF08281 Sigma-70, region 4 KSO_018510 PF04542 Sigma-70 region 2 KSO_018520 PF04463 Protein of unknown function (DUF523) KSO_018530 PF01380 SIS domain KSO_018535 PF00367 phosphotransferase system, EIIB KSO_018535 PF02378 Phosphotransferase system, EIIC KSO_018540 PF00144 Beta-lactamase KSO_018545 PF01915 Glycosyl hydrolase family 3 C-terminal domain KSO_018545 PF00933 Glycosyl hydrolase family 3 N terminal domain KSO_018550 PF07075 Protein of unknown function (DUF1343) KSO_018555 PF01497 Periplasmic binding protein KSO_018555 PF12833 Helix-turn-helix domain KSO_018560 PF01497 Periplasmic binding protein KSO_018565 PF01032 FecCD transport family KSO_018570 PF01032 FecCD transport family KSO_018575 PF00756 Putative esterase KSO_018580 PF01758 Sodium Bile acid symporter family KSO_018585 PF00916 Sulfate permease family KSO_018585 PF01740 STAS domain KSO_018590 PF00107 Zinc-binding dehydrogenase KSO_018590 PF08240 Alcohol dehydrogenase GroES-like domain KSO_018600 PF00202 Aminotransferase class-III KSO_018605 PF07690 Major Facilitator Superfamily KSO_018610 PF01522 Polysaccharide deacetylase KSO_018615 PF14089 KinB-signalling pathway activation in sporulation KSO_018620 PF17898 Spore germination GerD central core domain KSO_018625 PF10609 NUBPL iron-transfer P-loop NTPase KSO_018630 PF01520 N-acetylmuramoyl-L-alanine amidase KSO_018635 PF10730 Protein of unknown function (DUF2521) KSO_018640 PF05163 DinB family KSO_018645 PF08241 Methyltransferase domain KSO_018650 PF00380 Ribosomal protein S9/S16 KSO_018655 PF00572 Ribosomal protein L13 KSO_018660 PF01416 tRNA pseudouridine synthase KSO_018665 PF02361 Cobalt transport protein KSO_018670 PF00005 ABC transporter KSO_018675 PF00005 ABC transporter KSO_018680 PF01196 Ribosomal protein L17 KSO_018685 PF01000 RNA polymerase Rpb3/RpoA insert domain KSO_018685 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KSO_018685 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KSO_018690 PF00411 Ribosomal protein S11 KSO_018695 PF00416 Ribosomal protein S13/S18 KSO_018700 PF00444 Ribosomal protein L36 KSO_018705 PF01176 Translation initiation factor 1A / IF-1 KSO_018710 PF00557 Metallopeptidase family M24 KSO_018715 PF05191 Adenylate kinase, active site lid KSO_018720 PF00344 SecY translocase KSO_018725 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KSO_018730 PF00327 Ribosomal protein L30p/L7e KSO_018735 PF03719 Ribosomal protein S5, C-terminal domain KSO_018735 PF00333 Ribosomal protein S5, N-terminal domain KSO_018740 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KSO_018745 PF00347 Ribosomal protein L6 KSO_018750 PF00410 Ribosomal protein S8 KSO_018755 PF00253 Ribosomal protein S14p/S29e KSO_018760 PF00673 ribosomal L5P family C-terminus KSO_018760 PF00281 Ribosomal protein L5 KSO_018765 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KSO_018765 PF00467 KOW motif KSO_018770 PF00238 Ribosomal protein L14p/L23e KSO_018775 PF00366 Ribosomal protein S17 KSO_018780 PF00831 Ribosomal L29 protein KSO_018785 PF00252 Ribosomal protein L16p/L10e KSO_018790 PF00189 Ribosomal protein S3, C-terminal domain KSO_018790 PF07650 KH domain KSO_018795 PF00237 Ribosomal protein L22p/L17e KSO_018800 PF00203 Ribosomal protein S19 KSO_018805 PF00181 Ribosomal Proteins L2, RNA binding domain KSO_018805 PF03947 Ribosomal Proteins L2, C-terminal domain KSO_018810 PF00276 Ribosomal protein L23 KSO_018815 PF00573 Ribosomal protein L4/L1 family KSO_018820 PF00297 Ribosomal protein L3 KSO_018825 PF00338 Ribosomal protein S10p/S20e KSO_018830 PF12146 Serine aminopeptidase, S33 KSO_018835 PF00009 Elongation factor Tu GTP binding domain KSO_018835 PF03144 Elongation factor Tu domain 2 KSO_018835 PF03143 Elongation factor Tu C-terminal domain KSO_018840 PF00679 Elongation factor G C-terminus KSO_018840 PF03764 Elongation factor G, domain IV KSO_018840 PF00009 Elongation factor Tu GTP binding domain KSO_018840 PF03144 Elongation factor Tu domain 2 KSO_018840 PF14492 Elongation Factor G, domain II KSO_018845 PF00177 Ribosomal protein S7p/S5e KSO_018850 PF00164 Ribosomal protein S12/S23 KSO_018855 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KSO_018860 PF00623 RNA polymerase Rpb1, domain 2 KSO_018860 PF04983 RNA polymerase Rpb1, domain 3 KSO_018860 PF05000 RNA polymerase Rpb1, domain 4 KSO_018860 PF04998 RNA polymerase Rpb1, domain 5 KSO_018860 PF04997 RNA polymerase Rpb1, domain 1 KSO_018865 PF04560 RNA polymerase Rpb2, domain 7 KSO_018865 PF00562 RNA polymerase Rpb2, domain 6 KSO_018865 PF10385 RNA polymerase beta subunit external 1 domain KSO_018865 PF04565 RNA polymerase Rpb2, domain 3 KSO_018865 PF04561 RNA polymerase Rpb2, domain 2 KSO_018865 PF04563 RNA polymerase beta subunit KSO_018870 PF05175 Methyltransferase small domain KSO_018875 PF00542 Ribosomal protein L7/L12 C-terminal domain KSO_018875 PF16320 Ribosomal protein L7/L12 dimerisation domain KSO_018880 PF00466 Ribosomal protein L10 KSO_018885 PF00687 Ribosomal protein L1p/L10e family KSO_018890 PF00298 Ribosomal protein L11, RNA binding domain KSO_018890 PF03946 Ribosomal protein L11, N-terminal domain KSO_018895 PF02357 Transcription termination factor nusG KSO_018895 PF00467 KOW motif KSO_018900 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KSO_018905 PF00471 Ribosomal protein L33 KSO_018910 PF04542 Sigma-70 region 2 KSO_018910 PF08281 Sigma-70, region 4 KSO_018915 PF05991 YacP-like NYN domain KSO_018920 PF08032 RNA 2'-O ribose methyltransferase substrate binding KSO_018920 PF00588 SpoU rRNA Methylase family KSO_018925 PF00636 Ribonuclease III domain KSO_018930 PF09190 DALR domain KSO_018930 PF01406 tRNA synthetases class I (C) catalytic domain KSO_018935 PF00132 Bacterial transferase hexapeptide (six repeats) KSO_018935 PF06426 Serine acetyltransferase, N-terminal KSO_018940 PF00749 tRNA synthetases class I (E and Q), catalytic domain KSO_018945 PF02542 YgbB family KSO_018950 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KSO_018960 PF02457 DisA bacterial checkpoint controller nucleotide-binding KSO_018960 PF10635 DisA bacterial checkpoint controller linker region KSO_018965 PF18073 Rubredoxin metal binding domain KSO_018970 PF02861 Clp amino terminal domain, pathogenicity island component KSO_018970 PF17871 AAA lid domain KSO_018970 PF07724 AAA domain (Cdc48 subfamily) KSO_018970 PF00004 ATPase family associated with various cellular activities (AAA) KSO_018970 PF10431 C-terminal, D2-small domain, of ClpB protein KSO_018975 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KSO_018980 PF02151 UvrB/uvrC motif KSO_018985 PF05848 CtsR N-terminal HTH domain KSO_018985 PF17727 CtsR C-terminal dimerization domain KSO_018990 PF00152 tRNA synthetases class II (D, K and N) KSO_018990 PF01336 OB-fold nucleic acid binding domain KSO_018995 PF01207 Dihydrouridine synthase (Dus) KSO_019000 PF01381 Helix-turn-helix KSO_019005 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KSO_019010 PF02152 Dihydroneopterin aldolase KSO_019015 PF00809 Pterin binding enzyme KSO_019020 PF01063 Amino-transferase class IV KSO_019025 PF00117 Glutamine amidotransferase class-I KSO_019030 PF04715 Anthranilate synthase component I, N terminal region KSO_019030 PF00425 chorismate binding enzyme KSO_019035 PF00291 Pyridoxal-phosphate dependent enzyme KSO_019040 PF13145 PPIC-type PPIASE domain KSO_019045 PF01430 Hsp33 protein KSO_019050 PF03309 Type III pantothenate kinase KSO_019055 PF17862 AAA+ lid domain KSO_019055 PF00004 ATPase family associated with various cellular activities (AAA) KSO_019055 PF06480 FtsH Extracellular KSO_019055 PF01434 Peptidase family M41 KSO_019065 PF09179 TilS substrate binding domain KSO_019065 PF01171 PP-loop family KSO_019065 PF11734 TilS substrate C-terminal domain KSO_019070 PF00069 Protein kinase domain KSO_019075 PF00092 von Willebrand factor type A domain KSO_019080 PF07228 Stage II sporulation protein E (SpoIIE) KSO_019085 PF00575 S1 RNA binding domain KSO_019090 PF04977 Septum formation initiator KSO_019095 PF09578 Spore cortex protein YabQ (Spore_YabQ) KSO_019100 PF07873 YabP family KSO_019105 PF01479 S4 domain KSO_019110 PF03819 MazG nucleotide pyrophosphohydrolase domain KSO_019110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KSO_019115 PF01943 Polysaccharide biosynthesis protein KSO_019115 PF14667 Polysaccharide biosynthesis C-terminal domain KSO_019120 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KSO_019120 PF15714 Stage V sporulation protein T C-terminal, transcription factor KSO_019125 PF00270 DEAD/DEAH box helicase KSO_019125 PF03461 TRCF domain KSO_019125 PF02559 CarD-like/TRCF domain KSO_019125 PF00271 Helicase conserved C-terminal domain KSO_019125 PF17757 UvrB interaction domain KSO_019130 PF10955 Protein of unknown function (DUF2757) KSO_019135 PF01195 Peptidyl-tRNA hydrolase KSO_019140 PF01386 Ribosomal L25p family KSO_019140 PF14693 Ribosomal protein TL5, C-terminal domain KSO_019145 PF14572 Phosphoribosyl synthetase-associated domain KSO_019145 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KSO_019150 PF00132 Bacterial transferase hexapeptide (six repeats) KSO_019150 PF00483 Nucleotidyl transferase KSO_019155 PF04026 SpoVG KSO_019160 PF01042 Endoribonuclease L-PSP KSO_019165 PF00156 Phosphoribosyl transferase domain KSO_019165 PF09182 Bacterial purine repressor, N-terminal KSO_019170 PF00288 GHMP kinases N terminal domain KSO_019170 PF08544 GHMP kinases C terminal KSO_019175 PF00269 Small, acid-soluble spore proteins, alpha/beta type KSO_019180 PF06257 Biofilm formation stimulator VEG KSO_019185 PF05582 YabG peptidase U57 KSO_019190 PF00398 Ribosomal RNA adenine dimethylase KSO_019195 PF13662 Toprim domain KSO_019195 PF13331 Domain of unknown function (DUF4093) KSO_019200 PF07501 G5 domain KSO_019200 PF03990 G5-linked-Ubiquitin-like domain KSO_019200 PF06725 3D domain KSO_019205 PF01026 TatD related DNase KSO_019210 PF09334 tRNA synthetases class I (M) KSO_019210 PF01588 Putative tRNA binding domain KSO_019210 PF08264 Anticodon-binding domain of tRNA KSO_019215 PF18277 AbrB C-terminal domain KSO_019215 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KSO_019220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KSO_019225 PF01541 GIY-YIG catalytic domain KSO_019230 PF05175 Methyltransferase small domain KSO_019235 PF06156 Initiation control protein YabA KSO_019240 PF04468 PSP1 C-terminal conserved region KSO_019245 PF09115 DNA polymerase III, delta subunit, C terminal KSO_019250 PF03885 Protein of unknown function (DUF327) KSO_019255 PF06153 Cyclic-di-AMP receptor KSO_019260 PF02223 Thymidylate kinase KSO_019265 PF01276 Orn/Lys/Arg decarboxylase, major domain KSO_019265 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KSO_019270 PF05816 Toxic anion resistance protein (TelA) KSO_019275 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein KSO_019280 PF10764 Inhibitor of sigma-G Gin KSO_019290 PF07441 SigmaK-factor processing regulatory protein BofA KSO_019295 PF10704 Protein of unknown function (DUF2508) KSO_019300 PF02132 RecR protein KSO_019300 PF13662 Toprim domain KSO_019305 PF02575 YbaB/EbfC DNA-binding family KSO_019310 PF12169 DNA polymerase III subunits gamma and tau domain III KSO_019315 PF14437 MafB19-like deaminase KSO_019320 PF00857 Isochorismatase family KSO_019325 PF00704 Glycosyl hydrolases family 18 KSO_019325 PF01476 LysM domain KSO_019330 PF01712 Deoxynucleoside kinase KSO_019335 PF01712 Deoxynucleoside kinase KSO_019340 PF02595 Glycerate kinase family KSO_019345 PF02403 Seryl-tRNA synthetase N-terminal domain KSO_019345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KSO_019350 PF01174 SNO glutamine amidotransferase family KSO_019355 PF01680 SOR/SNZ family KSO_019360 PF00768 D-alanyl-D-alanine carboxypeptidase KSO_019360 PF07943 Penicillin-binding protein 5, C-terminal domain KSO_019365 PF00478 IMP dehydrogenase / GMP reductase domain KSO_019365 PF00571 CBS domain KSO_019370 PF14175 YaaC-like Protein KSO_019375 PF00521 DNA gyrase/topoisomerase IV, subunit A KSO_019375 PF03989 DNA gyrase C-terminal domain, beta-propeller KSO_019380 PF01751 Toprim domain KSO_019380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KSO_019380 PF00986 DNA gyrase B subunit, carboxyl terminus KSO_019380 PF00204 DNA gyrase B KSO_019385 PF04025 Domain of unknown function (DUF370) KSO_019390 PF02463 RecF/RecN/SMC N terminal domain KSO_019400 PF00712 DNA polymerase III beta subunit, N-terminal domain KSO_019400 PF02767 DNA polymerase III beta subunit, central domain KSO_019400 PF02768 DNA polymerase III beta subunit, C-terminal domain KSO_019405 PF00308 Bacterial dnaA protein KSO_019405 PF11638 DnaA N-terminal domain KSO_019405 PF08299 Bacterial dnaA protein helix-turn-helix KSO_p19302 PF01076 Plasmid recombination enzyme KSO_p19307 PF10502 Signal peptidase, peptidase S26 KSO_p19322 PF01446 Replication protein KSO_p19332 PF13181 Tetratricopeptide repeat KSO_p19332 PF18801 response regulator aspartate phosphatase H, N terminal