KSO_000025 SM00393 Putative single-stranded nucleic acids-binding domain KSO_000025 SM01245 KSO_000025 KSO_000035 SM01228 KSO_000035 KSO_000045 SM00470 ParB-like nuclease domain KSO_000055 SM00470 ParB-like nuclease domain KSO_000080 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KSO_000105 SM00342 helix_turn_helix, arabinose operon control protein KSO_000120 SM00354 helix_turn _helix lactose operon repressor KSO_000170 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_000205 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_000215 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_000240 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_000240 SM00895 KSO_000240 KSO_000245 SM00640 Glycosyl hydrolases family 32 KSO_000260 SM01131 KSO_000260 KSO_000285 SM00267 diguanylate cyclase KSO_000345 SM00382 ATPases associated with a variety of cellular activities KSO_000355 SM00788 Adenylosuccinate synthetase KSO_000365 SM00448 cheY-homologous receiver domain KSO_000365 SM00862 Transcriptional regulatory protein, C terminal KSO_000370 SM00091 PAS domain KSO_000370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_000370 SM00387 Histidine kinase-like ATPases KSO_000370 SM00388 His Kinase A (phosphoacceptor) domain KSO_000385 SM00849 Metallo-beta-lactamase superfamily KSO_000390 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_000405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_000405 SM00387 Histidine kinase-like ATPases KSO_000405 SM00388 His Kinase A (phosphoacceptor) domain KSO_000425 SM00382 ATPases associated with a variety of cellular activities KSO_000430 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. KSO_000435 SM00382 ATPases associated with a variety of cellular activities KSO_000440 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KSO_000465 SM00028 Tetratricopeptide repeats KSO_000520 SM00487 DEAD-like helicases superfamily KSO_000520 SM00491 KSO_000520 KSO_000580 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KSO_000585 SM01092 CO dehydrogenase flavoprotein C-terminal domain KSO_000630 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KSO_000640 SM00564 beta-propeller repeat KSO_000665 SM00421 helix_turn_helix, Lux Regulon KSO_000665 SM00448 cheY-homologous receiver domain KSO_000680 SM00387 Histidine kinase-like ATPases KSO_000695 SM00420 helix_turn_helix, Deoxyribose operon repressor KSO_000695 SM01134 KSO_000695 KSO_000750 SM00448 cheY-homologous receiver domain KSO_000750 SM00862 Transcriptional regulatory protein, C terminal KSO_000755 SM00387 Histidine kinase-like ATPases KSO_000760 SM00382 ATPases associated with a variety of cellular activities KSO_000815 SM01133 KSO_000815 KSO_000825 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain KSO_000870 SM00487 DEAD-like helicases superfamily KSO_000870 SM00490 helicase superfamily c-terminal domain KSO_000885 SM00656 KSO_000885 KSO_000960 SM00487 DEAD-like helicases superfamily KSO_000960 SM00490 helicase superfamily c-terminal domain KSO_000995 SM01060 KSO_000995 KSO_001075 SM00382 ATPases associated with a variety of cellular activities KSO_001100 SM00382 ATPases associated with a variety of cellular activities KSO_001105 SM00382 ATPases associated with a variety of cellular activities KSO_001125 SM01060 KSO_001125 KSO_001170 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KSO_001260 SM00954 Region found in RelA / SpoT proteins KSO_001285 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KSO_001290 SM00422 helix_turn_helix, mercury resistance KSO_001435 SM01061 CAT RNA binding domain KSO_001445 SM00640 Glycosyl hydrolases family 32 KSO_001480 SM00986 Uracil DNA glycosylase superfamily KSO_001480 SM00987 UreE urease accessory protein, C-terminal domain KSO_001525 SM00858 KSO_001525 KSO_001565 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KSO_001680 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_001700 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_001740 SM00421 helix_turn_helix, Lux Regulon KSO_001765 SM00530 Helix-turn-helix XRE-family like proteins KSO_001775 SM00028 Tetratricopeptide repeats KSO_001785 SM00836 DALR anticodon binding domain KSO_001785 SM01016 Arginyl tRNA synthetase N terminal dom KSO_001795 SM00100 Cyclic nucleotide-monophosphate binding domain KSO_001795 SM00419 helix_turn_helix, cAMP Regulatory protein KSO_001810 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KSO_001835 SM00155 Phospholipase D. Active site motifs. KSO_001840 SM00382 ATPases associated with a variety of cellular activities KSO_001855 SM00155 Phospholipase D. Active site motifs. KSO_001880 SM00448 cheY-homologous receiver domain KSO_001910 SM00357 Cold shock protein domain KSO_001910 SM00382 ATPases associated with a variety of cellular activities KSO_001910 SM00959 Rho termination factor, N-terminal domain KSO_001925 SM00919 Malic enzyme, NAD binding domain KSO_001925 SM01274 KSO_001925 KSO_001945 SM00937 KSO_001945 KSO_001980 SM00226 Low molecular weight phosphatase family KSO_002040 SM00382 ATPases associated with a variety of cellular activities KSO_002075 SM00327 von Willebrand factor (vWF) type A domain KSO_002080 SM00327 von Willebrand factor (vWF) type A domain KSO_002095 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_002100 SM00028 Tetratricopeptide repeats KSO_002155 SM00155 Phospholipase D. Active site motifs. KSO_002190 SM00014 Acid phosphatase homologues KSO_002200 SM00938 Nitrogen regulatory protein P-II KSO_002230 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_002255 SM00028 Tetratricopeptide repeats KSO_002285 SM00420 helix_turn_helix, Deoxyribose operon repressor KSO_002285 SM01134 KSO_002285 KSO_002295 SM00487 DEAD-like helicases superfamily KSO_002295 SM00490 helicase superfamily c-terminal domain KSO_002330 SM00984 UDP binding domain KSO_002380 SM00860 SMI1 / KNR4 family KSO_002430 SM00344 helix_turn_helix ASNC type KSO_002445 SM00903 Flavin reductase like domain KSO_002500 SM00287 Bacterial SH3 domain homologues KSO_002515 SM00382 ATPases associated with a variety of cellular activities KSO_002530 SM00354 helix_turn _helix lactose operon repressor KSO_002560 SM00854 Bacterial capsule synthesis protein PGA_cap KSO_002620 SM00047 Lysozyme subfamily 2 KSO_002620 SM00287 Bacterial SH3 domain homologues KSO_002655 SM00382 ATPases associated with a variety of cellular activities KSO_002685 SM00646 KSO_002685 KSO_002705 SM00984 UDP binding domain KSO_002745 SM00387 Histidine kinase-like ATPases KSO_002750 SM00421 helix_turn_helix, Lux Regulon KSO_002750 SM00448 cheY-homologous receiver domain KSO_002760 SM00487 DEAD-like helicases superfamily KSO_002760 SM00490 helicase superfamily c-terminal domain KSO_002845 SM00957 SecA DEAD-like domain KSO_002845 SM00958 SecA preprotein cross-linking domain KSO_002850 SM00937 KSO_002850 KSO_002865 SM00382 ATPases associated with a variety of cellular activities KSO_002875 SM00710 Parallel beta-helix repeats KSO_002880 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_002880 SM00245 tail specific protease KSO_002890 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_002940 SM00487 DEAD-like helicases superfamily KSO_002940 SM00490 helicase superfamily c-terminal domain KSO_002945 SM00382 ATPases associated with a variety of cellular activities KSO_002985 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_002985 SM00866 KSO_002985 KSO_003065 SM00382 ATPases associated with a variety of cellular activities KSO_003075 SM00448 cheY-homologous receiver domain KSO_003075 SM00862 Transcriptional regulatory protein, C terminal KSO_003080 SM00387 Histidine kinase-like ATPases KSO_003080 SM00388 His Kinase A (phosphoacceptor) domain KSO_003085 SM00028 Tetratricopeptide repeats KSO_003145 SM00947 Carbonic anhydrase KSO_003185 SM00354 helix_turn _helix lactose operon repressor KSO_003195 SM00640 Glycosyl hydrolases family 32 KSO_003280 SM00530 Helix-turn-helix XRE-family like proteins KSO_003375 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_003375 SM00895 KSO_003375 KSO_003425 SM00354 helix_turn _helix lactose operon repressor KSO_003460 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_003475 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KSO_003500 SM01192 KSO_003500 KSO_003500 SM01193 KSO_003500 KSO_003510 SM00984 UDP binding domain KSO_003585 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_003585 SM00382 ATPases associated with a variety of cellular activities KSO_003610 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_003610 SM00382 ATPases associated with a variety of cellular activities KSO_003630 SM00382 ATPases associated with a variety of cellular activities KSO_003645 SM00448 cheY-homologous receiver domain KSO_003645 SM00862 Transcriptional regulatory protein, C terminal KSO_003650 SM00387 Histidine kinase-like ATPases KSO_003650 SM00388 His Kinase A (phosphoacceptor) domain KSO_003660 SM00530 Helix-turn-helix XRE-family like proteins KSO_003665 SM00530 Helix-turn-helix XRE-family like proteins KSO_003670 SM00530 Helix-turn-helix XRE-family like proteins KSO_003685 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_003685 SM00357 Cold shock protein domain KSO_003685 SM00955 KSO_003685 KSO_003730 SM00062 Bacterial periplasmic substrate-binding proteins KSO_003735 SM00062 Bacterial periplasmic substrate-binding proteins KSO_003750 SM00382 ATPases associated with a variety of cellular activities KSO_003785 SM00530 Helix-turn-helix XRE-family like proteins KSO_003885 SM00382 ATPases associated with a variety of cellular activities KSO_003895 SM00421 helix_turn_helix, Lux Regulon KSO_003895 SM00448 cheY-homologous receiver domain KSO_003955 SM00382 ATPases associated with a variety of cellular activities KSO_003965 SM00835 Cupin KSO_003985 SM00448 cheY-homologous receiver domain KSO_003985 SM00862 Transcriptional regulatory protein, C terminal KSO_003990 SM00387 Histidine kinase-like ATPases KSO_003990 SM00388 His Kinase A (phosphoacceptor) domain KSO_004015 SM00382 ATPases associated with a variety of cellular activities KSO_004050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_004050 SM00387 Histidine kinase-like ATPases KSO_004055 SM00421 helix_turn_helix, Lux Regulon KSO_004055 SM00448 cheY-homologous receiver domain KSO_004095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_004095 SM00387 Histidine kinase-like ATPases KSO_004095 SM00388 His Kinase A (phosphoacceptor) domain KSO_004100 SM00448 cheY-homologous receiver domain KSO_004100 SM00862 Transcriptional regulatory protein, C terminal KSO_004105 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_004130 SM00382 ATPases associated with a variety of cellular activities KSO_004160 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_004215 SM00493 KSO_004215 KSO_004235 SM00382 ATPases associated with a variety of cellular activities KSO_004235 SM00930 KSO_004235 KSO_004260 SM00382 ATPases associated with a variety of cellular activities KSO_004305 SM00465 GIY-YIG type nucleases (URI domain) KSO_004315 SM00422 helix_turn_helix, mercury resistance KSO_004345 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_004345 SM00866 KSO_004345 KSO_004350 SM00382 ATPases associated with a variety of cellular activities KSO_004420 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_004510 SM00422 helix_turn_helix, mercury resistance KSO_004535 SM00382 ATPases associated with a variety of cellular activities KSO_004550 SM01240 KSO_004550 KSO_004620 SM00822 KSO_004620 KSO_004640 SM00823 Phosphopantetheine attachment site KSO_004640 SM00824 Thioesterase KSO_004645 SM00923 MbtH-like protein KSO_004655 SM01002 Alanine dehydrogenase/PNT, C-terminal domain KSO_004655 SM01003 Alanine dehydrogenase/PNT, N-terminal domain KSO_004700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_004770 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_004770 SM00387 Histidine kinase-like ATPases KSO_004775 SM00421 helix_turn_helix, Lux Regulon KSO_004775 SM00448 cheY-homologous receiver domain KSO_004835 SM00382 ATPases associated with a variety of cellular activities KSO_004850 SM00448 cheY-homologous receiver domain KSO_004855 SM00091 PAS domain KSO_004855 SM00387 Histidine kinase-like ATPases KSO_004880 SM00479 KSO_004880 KSO_004885 SM01298 KSO_004885 KSO_004890 SM00387 Histidine kinase-like ATPases KSO_004890 SM00388 His Kinase A (phosphoacceptor) domain KSO_004910 SM00344 helix_turn_helix ASNC type KSO_004920 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_004985 SM01091 Transporter associated domain KSO_004990 SM00642 Alpha-amylase domain KSO_005015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_005015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_005015 SM00319 Homologues of the ligand binding domain of Tar KSO_005020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_005020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_005020 SM00319 Homologues of the ligand binding domain of Tar KSO_005025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_005025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_005025 SM00319 Homologues of the ligand binding domain of Tar KSO_005030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_005030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_005030 SM00319 Homologues of the ligand binding domain of Tar KSO_005065 SM00028 Tetratricopeptide repeats KSO_005090 SM00835 Cupin KSO_005100 SM00047 Lysozyme subfamily 2 KSO_005145 SM00244 prohibitin homologues KSO_005190 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain KSO_005215 SM00947 Carbonic anhydrase KSO_005220 SM01234 KSO_005220 KSO_005260 SM00382 ATPases associated with a variety of cellular activities KSO_005335 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_005350 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_005355 SM00382 ATPases associated with a variety of cellular activities KSO_005375 SM00382 ATPases associated with a variety of cellular activities KSO_005385 SM00448 cheY-homologous receiver domain KSO_005385 SM00862 Transcriptional regulatory protein, C terminal KSO_005390 SM00387 Histidine kinase-like ATPases KSO_005395 SM00382 ATPases associated with a variety of cellular activities KSO_005415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KSO_005415 SM00091 PAS domain KSO_005430 SM00450 Rhodanese Homology Domain KSO_005460 SM00354 helix_turn _helix lactose operon repressor KSO_005485 SM00363 S4 RNA-binding domain KSO_005490 SM00420 helix_turn_helix, Deoxyribose operon repressor KSO_005495 SM00382 ATPases associated with a variety of cellular activities KSO_005530 SM00046 Diacylglycerol kinase catalytic domain (presumed) KSO_005550 SM00849 Metallo-beta-lactamase superfamily KSO_005555 SM00919 Malic enzyme, NAD binding domain KSO_005555 SM01274 KSO_005555 KSO_005590 SM00382 ATPases associated with a variety of cellular activities KSO_005590 SM00843 KSO_005590 KSO_005615 SM00830 Chorismate mutase type II KSO_005620 SM00354 helix_turn _helix lactose operon repressor KSO_005640 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_005655 SM00363 S4 RNA-binding domain KSO_005715 SM00860 SMI1 / KNR4 family KSO_005725 SM00363 S4 RNA-binding domain KSO_005725 SM01390 KSO_005725 KSO_005735 SM00267 diguanylate cyclase KSO_005770 SM00981 KSO_005770 KSO_005830 SM00852 Probable molybdopterin binding domain KSO_005855 SM00849 Metallo-beta-lactamase superfamily KSO_005860 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_005890 SM00481 DNA polymerase alpha chain like domain KSO_005895 SM00919 Malic enzyme, NAD binding domain KSO_005895 SM01274 KSO_005895 KSO_005945 SM01329 KSO_005945 KSO_005960 SM00448 cheY-homologous receiver domain KSO_005960 SM00862 Transcriptional regulatory protein, C terminal KSO_005965 SM00091 PAS domain KSO_005965 SM00387 Histidine kinase-like ATPases KSO_005965 SM00388 His Kinase A (phosphoacceptor) domain KSO_005970 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs KSO_005970 SM00474 3'-5' exonuclease KSO_005970 SM00475 5'-3' exonuclease KSO_005970 SM00482 DNA polymerase A domain KSO_005975 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain KSO_005975 SM01232 KSO_005975 KSO_006005 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KSO_006030 SM00382 ATPases associated with a variety of cellular activities KSO_006045 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KSO_006060 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. KSO_006060 SM00387 Histidine kinase-like ATPases KSO_006065 SM00448 cheY-homologous receiver domain KSO_006065 SM00850 LytTr DNA-binding domain KSO_006130 SM01007 Class II Aldolase and Adducin N-terminal domain KSO_006160 SM00813 Alpha-L-arabinofuranosidase C-terminus KSO_006190 SM00967 RNA 2'-O ribose methyltransferase substrate binding KSO_006200 SM00873 B3/4 domain KSO_006200 SM00874 tRNA synthetase B5 domain KSO_006200 SM00896 Ferredoxin-fold anticodon binding domain KSO_006220 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KSO_006220 SM00481 DNA polymerase alpha chain like domain KSO_006220 SM00483 DNA polymerase X family KSO_006225 SM00463 Small MutS-related domain KSO_006225 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KSO_006225 SM00534 ATPase domain of DNA mismatch repair MUTS family KSO_006255 SM00893 Electron transfer flavoprotein domain KSO_006260 SM00893 Electron transfer flavoprotein domain KSO_006265 SM00813 Alpha-L-arabinofuranosidase C-terminus KSO_006275 SM00465 GIY-YIG type nucleases (URI domain) KSO_006310 SM00421 helix_turn_helix, Lux Regulon KSO_006315 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_006325 SM00909 Sporulation and spore germination KSO_006380 SM00917 LeuA allosteric (dimerisation) domain KSO_006385 SM01329 KSO_006385 KSO_006415 SM00382 ATPases associated with a variety of cellular activities KSO_006415 SM00994 ClpX C4-type zinc finger KSO_006415 SM01086 C-terminal, D2-small domain, of ClpB protein KSO_006420 SM00382 ATPases associated with a variety of cellular activities KSO_006425 SM00382 ATPases associated with a variety of cellular activities KSO_006425 SM00464 Found in ATP-dependent protease La (LON) KSO_006460 SM01004 Delta-aminolevulinic acid dehydratase KSO_006470 SM00257 Lysin motif KSO_006570 SM01317 KSO_006570 KSO_006615 SM00257 Lysin motif KSO_006635 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KSO_006640 SM00382 ATPases associated with a variety of cellular activities KSO_006660 SM01323 KSO_006660 KSO_006710 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_006710 SM00954 Region found in RelA / SpoT proteins KSO_006720 SM00287 Bacterial SH3 domain homologues KSO_006720 SM00646 KSO_006720 KSO_006750 SM00382 ATPases associated with a variety of cellular activities KSO_006770 SM00028 Tetratricopeptide repeats KSO_006775 SM00382 ATPases associated with a variety of cellular activities KSO_006805 SM00062 Bacterial periplasmic substrate-binding proteins KSO_006805 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. KSO_006810 SM00382 ATPases associated with a variety of cellular activities KSO_006820 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KSO_006830 SM00732 Likely ribonuclease with RNase H fold. KSO_006880 SM00530 Helix-turn-helix XRE-family like proteins KSO_006885 SM00530 Helix-turn-helix XRE-family like proteins KSO_007035 SM00507 HNH nucleases KSO_007115 SM00047 Lysozyme subfamily 2 KSO_007120 SM00710 Parallel beta-helix repeats KSO_007145 SM00644 KSO_007145 KSO_007215 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KSO_007215 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KSO_007270 SM00849 Metallo-beta-lactamase superfamily KSO_007345 SM00342 helix_turn_helix, arabinose operon control protein KSO_007345 SM00871 Bacterial transcription activator, effector binding domain KSO_007410 SM01103 KSO_007410 KSO_007420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_007440 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KSO_007450 SM00849 Metallo-beta-lactamase superfamily KSO_007480 SM00838 Elongation factor G C-terminus KSO_007485 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_007505 SM00271 DnaJ molecular chaperone homology domain KSO_007520 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_007570 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_007615 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_007630 SM00400 zinc finger KSO_007630 SM00493 KSO_007630 KSO_007665 SM00487 DEAD-like helicases superfamily KSO_007665 SM00490 helicase superfamily c-terminal domain KSO_007670 SM00518 AP endonuclease family 2 KSO_007705 SM00257 Lysin motif KSO_007750 SM00382 ATPases associated with a variety of cellular activities KSO_007755 SM00382 ATPases associated with a variety of cellular activities KSO_007800 SM00631 KSO_007800 KSO_007820 SM00849 Metallo-beta-lactamase superfamily KSO_007840 SM01091 Transporter associated domain KSO_007850 SM00382 ATPases associated with a variety of cellular activities KSO_007910 SM00530 Helix-turn-helix XRE-family like proteins KSO_007925 SM00487 DEAD-like helicases superfamily KSO_007925 SM00490 helicase superfamily c-terminal domain KSO_007945 SM00450 Rhodanese Homology Domain KSO_007955 SM00529 Helix-turn-helix diphteria tox regulatory element KSO_007985 SM00841 Elongation factor P, C-terminal KSO_007985 SM01185 KSO_007985 KSO_007995 SM00382 ATPases associated with a variety of cellular activities KSO_008040 SM00878 Biotin carboxylase C-terminal domain KSO_008080 SM00861 Transketolase, pyrimidine binding domain KSO_008085 SM00363 S4 RNA-binding domain KSO_008100 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_008105 SM00448 cheY-homologous receiver domain KSO_008110 SM01005 Alanine racemase, C-terminal domain KSO_008140 SM00530 Helix-turn-helix XRE-family like proteins KSO_008160 SM00646 KSO_008160 KSO_008205 SM00091 PAS domain KSO_008205 SM00382 ATPases associated with a variety of cellular activities KSO_008215 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KSO_008235 SM00861 Transketolase, pyrimidine binding domain KSO_008245 SM00046 Diacylglycerol kinase catalytic domain (presumed) KSO_008255 SM00062 Bacterial periplasmic substrate-binding proteins KSO_008255 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. KSO_008265 SM00382 ATPases associated with a variety of cellular activities KSO_008310 SM01350 KSO_008310 KSO_008350 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. KSO_008355 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KSO_008380 SM00822 KSO_008380 KSO_008380 SM00823 Phosphopantetheine attachment site KSO_008380 SM00825 Beta-ketoacyl synthase KSO_008380 SM00826 KSO_008380 KSO_008380 SM01294 KSO_008380 KSO_008385 SM00822 KSO_008385 KSO_008385 SM00823 Phosphopantetheine attachment site KSO_008385 SM00825 Beta-ketoacyl synthase KSO_008385 SM01294 KSO_008385 KSO_008390 SM00822 KSO_008390 KSO_008390 SM00823 Phosphopantetheine attachment site KSO_008390 SM00825 Beta-ketoacyl synthase KSO_008390 SM00826 KSO_008390 KSO_008390 SM01294 KSO_008390 KSO_008395 SM00822 KSO_008395 KSO_008395 SM00823 Phosphopantetheine attachment site KSO_008395 SM00825 Beta-ketoacyl synthase KSO_008395 SM00826 KSO_008395 KSO_008395 SM01294 KSO_008395 KSO_008400 SM00822 KSO_008400 KSO_008400 SM00823 Phosphopantetheine attachment site KSO_008400 SM00825 Beta-ketoacyl synthase KSO_008400 SM01294 KSO_008400 KSO_008405 SM00822 KSO_008405 KSO_008405 SM00825 Beta-ketoacyl synthase KSO_008405 SM00826 KSO_008405 KSO_008410 SM00823 Phosphopantetheine attachment site KSO_008410 SM00825 Beta-ketoacyl synthase KSO_008410 SM00829 Enoylreductase KSO_008410 SM01294 KSO_008410 KSO_008435 SM00849 Metallo-beta-lactamase superfamily KSO_008540 SM00530 Helix-turn-helix XRE-family like proteins KSO_008545 SM00870 KSO_008545 KSO_008560 SM00919 Malic enzyme, NAD binding domain KSO_008560 SM01274 KSO_008560 KSO_008610 SM00936 Penicillin-binding protein 5, C-terminal domain KSO_008620 SM00387 Histidine kinase-like ATPases KSO_008765 SM00363 S4 RNA-binding domain KSO_008785 SM00448 cheY-homologous receiver domain KSO_008785 SM00862 Transcriptional regulatory protein, C terminal KSO_008790 SM00091 PAS domain KSO_008790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_008790 SM00387 Histidine kinase-like ATPases KSO_008790 SM00388 His Kinase A (phosphoacceptor) domain KSO_008825 SM00487 DEAD-like helicases superfamily KSO_008825 SM00490 helicase superfamily c-terminal domain KSO_008835 SM00257 Lysin motif KSO_008855 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KSO_008895 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_008945 SM00411 bacterial (prokaryotic) histone like domain KSO_008975 SM00562 KSO_008975 KSO_008980 SM00138 Methyltransferase, chemotaxis proteins KSO_009045 SM00028 Tetratricopeptide repeats KSO_009050 SM00914 KSO_009050 KSO_009085 SM00835 Cupin KSO_009105 SM00851 MGS-like domain KSO_009145 SM00479 KSO_009145 KSO_009145 SM00487 DEAD-like helicases superfamily KSO_009145 SM00491 KSO_009145 KSO_009175 SM00478 endonuclease III KSO_009175 SM00525 KSO_009175 KSO_009185 SM00060 Fibronectin type 3 domain KSO_009235 SM00487 DEAD-like helicases superfamily KSO_009235 SM00490 helicase superfamily c-terminal domain KSO_009260 SM00981 KSO_009260 KSO_009280 SM00491 KSO_009280 KSO_009360 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs KSO_009360 SM00475 5'-3' exonuclease KSO_009400 SM00357 Cold shock protein domain KSO_009420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_009425 SM00567 E-Z type HEAT repeats KSO_009425 SM00932 Scaffold protein Nfu/NifU N terminal KSO_009500 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_009565 SM00882 Coenzyme A transferase KSO_009570 SM00882 Coenzyme A transferase KSO_009620 SM00014 Acid phosphatase homologues KSO_009655 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_009655 SM00245 tail specific protease KSO_009660 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_009660 SM00866 KSO_009660 KSO_009780 SM00257 Lysin motif KSO_009790 SM00382 ATPases associated with a variety of cellular activities KSO_009795 SM00327 von Willebrand factor (vWF) type A domain KSO_009800 SM00861 Transketolase, pyrimidine binding domain KSO_009810 SM00849 Metallo-beta-lactamase superfamily KSO_009895 SM00341 Helicase and RNase D C-terminal KSO_009895 SM00487 DEAD-like helicases superfamily KSO_009895 SM00490 helicase superfamily c-terminal domain KSO_009895 SM00956 KSO_009895 KSO_009900 SM00257 Lysin motif KSO_009940 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KSO_009950 SM00849 Metallo-beta-lactamase superfamily KSO_009960 SM00342 helix_turn_helix, arabinose operon control protein KSO_009980 SM00822 KSO_009980 KSO_009990 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_010000 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KSO_010030 SM00822 KSO_010030 KSO_010045 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KSO_010070 SM00829 Enoylreductase KSO_010085 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KSO_010135 SM00823 Phosphopantetheine attachment site KSO_010140 SM00823 Phosphopantetheine attachment site KSO_010145 SM00823 Phosphopantetheine attachment site KSO_010150 SM00823 Phosphopantetheine attachment site KSO_010155 SM00824 Thioesterase KSO_010180 SM00878 Biotin carboxylase C-terminal domain KSO_010240 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_010240 SM00876 Biotin and Thiamin Synthesis associated domain KSO_010255 SM00882 Coenzyme A transferase KSO_010260 SM00882 Coenzyme A transferase KSO_010265 SM00822 KSO_010265 KSO_010270 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KSO_010275 SM00823 Phosphopantetheine attachment site KSO_010275 SM00825 Beta-ketoacyl synthase KSO_010280 SM00823 Phosphopantetheine attachment site KSO_010285 SM00823 Phosphopantetheine attachment site KSO_010285 SM00824 Thioesterase KSO_010290 SM00606 Cellulose Binding Domain Type IV KSO_010300 SM00448 cheY-homologous receiver domain KSO_010300 SM00862 Transcriptional regulatory protein, C terminal KSO_010305 SM00387 Histidine kinase-like ATPases KSO_010305 SM00388 His Kinase A (phosphoacceptor) domain KSO_010315 SM01067 Cellulose binding domain KSO_010350 SM00354 helix_turn _helix lactose operon repressor KSO_010375 SM00829 Enoylreductase KSO_010400 SM00434 DNA Topoisomerase IV KSO_010405 SM00387 Histidine kinase-like ATPases KSO_010405 SM00433 TopoisomeraseII KSO_010410 SM00881 CoA binding domain KSO_010415 SM01207 KSO_010415 KSO_010485 SM00448 cheY-homologous receiver domain KSO_010510 SM00861 Transketolase, pyrimidine binding domain KSO_010520 SM00857 Resolvase, N terminal domain KSO_010525 SM00257 Lysin motif KSO_010565 SM00710 Parallel beta-helix repeats KSO_010635 SM00829 Enoylreductase KSO_010700 SM01230 KSO_010700 KSO_010705 SM00422 helix_turn_helix, mercury resistance KSO_010720 SM00382 ATPases associated with a variety of cellular activities KSO_010730 SM00646 KSO_010730 KSO_010835 SM00823 Phosphopantetheine attachment site KSO_010835 SM00825 Beta-ketoacyl synthase KSO_010835 SM01294 KSO_010835 KSO_010840 SM00822 KSO_010840 KSO_010840 SM00823 Phosphopantetheine attachment site KSO_010840 SM00825 Beta-ketoacyl synthase KSO_010840 SM00826 KSO_010840 KSO_010840 SM01294 KSO_010840 KSO_010845 SM00822 KSO_010845 KSO_010845 SM00823 Phosphopantetheine attachment site KSO_010845 SM00825 Beta-ketoacyl synthase KSO_010845 SM00826 KSO_010845 KSO_010845 SM01294 KSO_010845 KSO_010850 SM00822 KSO_010850 KSO_010850 SM00823 Phosphopantetheine attachment site KSO_010850 SM00825 Beta-ketoacyl synthase KSO_010850 SM00826 KSO_010850 KSO_010850 SM01294 KSO_010850 KSO_010855 SM00822 KSO_010855 KSO_010855 SM00823 Phosphopantetheine attachment site KSO_010855 SM00825 Beta-ketoacyl synthase KSO_010855 SM00826 KSO_010855 KSO_010855 SM01294 KSO_010855 KSO_010880 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KSO_010885 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KSO_010890 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KSO_010895 SM00849 Metallo-beta-lactamase superfamily KSO_010905 SM00853 MutL C terminal dimerisation domain KSO_010905 SM01340 KSO_010905 KSO_010910 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KSO_010910 SM00534 ATPase domain of DNA mismatch repair MUTS family KSO_010925 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_010935 SM00829 Enoylreductase KSO_010950 SM00322 K homology RNA-binding domain KSO_010950 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_010960 SM00382 ATPases associated with a variety of cellular activities KSO_010965 SM00852 Probable molybdopterin binding domain KSO_010975 SM00530 Helix-turn-helix XRE-family like proteins KSO_011010 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_011020 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_011020 SM00866 KSO_011020 KSO_011025 SM00382 ATPases associated with a variety of cellular activities KSO_011025 SM00843 KSO_011025 KSO_011040 SM00849 Metallo-beta-lactamase superfamily KSO_011045 SM01130 KSO_011045 KSO_011055 SM00859 Semialdehyde dehydrogenase, NAD binding domain KSO_011085 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_011085 SM00322 K homology RNA-binding domain KSO_011090 SM01387 KSO_011090 KSO_011095 SM00904 Riboflavin kinase KSO_011130 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_011130 SM00322 K homology RNA-binding domain KSO_011140 SM00479 KSO_011140 KSO_011140 SM00481 DNA polymerase alpha chain like domain KSO_011150 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_011210 SM00260 Two component signalling adaptor domain KSO_011215 SM00073 Histidine Phosphotransfer domain KSO_011215 SM00260 Two component signalling adaptor domain KSO_011215 SM00387 Histidine kinase-like ATPases KSO_011215 SM01231 KSO_011215 KSO_011220 SM00448 cheY-homologous receiver domain KSO_011230 SM00962 SRP54-type protein, GTPase domain KSO_011265 SM00448 cheY-homologous receiver domain KSO_011315 SM00382 ATPases associated with a variety of cellular activities KSO_011355 SM00382 ATPases associated with a variety of cellular activities KSO_011355 SM01086 C-terminal, D2-small domain, of ClpB protein KSO_011375 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KSO_011375 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KSO_011375 SM00493 KSO_011375 KSO_011390 SM00881 CoA binding domain KSO_011450 SM00382 ATPases associated with a variety of cellular activities KSO_011450 SM00962 SRP54-type protein, GTPase domain KSO_011450 SM00963 SRP54-type protein, helical bundle domain KSO_011465 SM00382 ATPases associated with a variety of cellular activities KSO_011465 SM00962 SRP54-type protein, GTPase domain KSO_011465 SM00963 SRP54-type protein, helical bundle domain KSO_011470 SM00968 SMC proteins Flexible Hinge Domain KSO_011475 SM00358 Double-stranded RNA binding motif KSO_011475 SM00535 Ribonuclease III family KSO_011485 SM00822 KSO_011485 KSO_011490 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KSO_011505 SM00487 DEAD-like helicases superfamily KSO_011505 SM00490 helicase superfamily c-terminal domain KSO_011520 SM01120 KSO_011520 KSO_011520 SM01121 KSO_011520 KSO_011540 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain KSO_011555 SM00220 Serine/Threonine protein kinases, catalytic domain KSO_011555 SM00740 KSO_011555 KSO_011560 SM00331 Sigma factor PP2C-like phosphatases KSO_011560 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KSO_011585 SM00487 DEAD-like helicases superfamily KSO_011585 SM00490 helicase superfamily c-terminal domain KSO_011595 SM01409 KSO_011595 KSO_011600 SM00072 Guanylate kinase homologues. KSO_011615 SM00831 Cation transporter/ATPase, N-terminus KSO_011670 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family KSO_011685 SM00851 MGS-like domain KSO_011685 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KSO_011690 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain KSO_011715 SM00363 S4 RNA-binding domain KSO_011745 SM00363 S4 RNA-binding domain KSO_011780 SM00382 ATPases associated with a variety of cellular activities KSO_011805 SM00864 Tubulin/FtsZ family, GTPase domain KSO_011805 SM00865 Tubulin/FtsZ family, C-terminal domain KSO_011810 SM00842 Cell division protein FtsA KSO_011850 SM00740 KSO_011850 KSO_011855 SM00740 KSO_011855 KSO_011970 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_012015 SM00878 Biotin carboxylase C-terminal domain KSO_012040 SM00670 Large family of predicted nucleotide-binding domains KSO_012060 SM00838 Elongation factor G C-terminus KSO_012145 SM00861 Transketolase, pyrimidine binding domain KSO_012160 SM00822 KSO_012160 KSO_012160 SM00823 Phosphopantetheine attachment site KSO_012160 SM01294 KSO_012160 KSO_012165 SM00822 KSO_012165 KSO_012165 SM00823 Phosphopantetheine attachment site KSO_012165 SM00825 Beta-ketoacyl synthase KSO_012165 SM01294 KSO_012165 KSO_012170 SM00822 KSO_012170 KSO_012170 SM00823 Phosphopantetheine attachment site KSO_012170 SM00825 Beta-ketoacyl synthase KSO_012170 SM01294 KSO_012170 KSO_012175 SM00822 KSO_012175 KSO_012175 SM00823 Phosphopantetheine attachment site KSO_012175 SM00825 Beta-ketoacyl synthase KSO_012175 SM01294 KSO_012175 KSO_012180 SM00822 KSO_012180 KSO_012180 SM00823 Phosphopantetheine attachment site KSO_012180 SM00825 Beta-ketoacyl synthase KSO_012180 SM01294 KSO_012180 KSO_012185 SM00822 KSO_012185 KSO_012185 SM00823 Phosphopantetheine attachment site KSO_012185 SM00825 Beta-ketoacyl synthase KSO_012185 SM00826 KSO_012185 KSO_012190 SM00822 KSO_012190 KSO_012190 SM00823 Phosphopantetheine attachment site KSO_012190 SM00825 Beta-ketoacyl synthase KSO_012190 SM00826 KSO_012190 KSO_012190 SM01294 KSO_012190 KSO_012195 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KSO_012225 SM00849 Metallo-beta-lactamase superfamily KSO_012245 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KSO_012245 SM00091 PAS domain KSO_012245 SM00387 Histidine kinase-like ATPases KSO_012245 SM00388 His Kinase A (phosphoacceptor) domain KSO_012250 SM00966 SpoVT / AbrB like domain KSO_012275 SM00382 ATPases associated with a variety of cellular activities KSO_012300 SM00420 helix_turn_helix, Deoxyribose operon repressor KSO_012300 SM01134 KSO_012300 KSO_012305 SM01066 Carbohydrate binding domain KSO_012310 SM00382 ATPases associated with a variety of cellular activities KSO_012340 SM00852 Probable molybdopterin binding domain KSO_012430 SM00052 Putative diguanylate phosphodiesterase KSO_012455 SM00257 Lysin motif KSO_012470 SM00260 Two component signalling adaptor domain KSO_012470 SM00448 cheY-homologous receiver domain KSO_012485 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KSO_012485 SM00091 PAS domain KSO_012485 SM00387 Histidine kinase-like ATPases KSO_012485 SM00388 His Kinase A (phosphoacceptor) domain KSO_012515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_012515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_012545 SM01061 CAT RNA binding domain KSO_012550 SM00354 helix_turn _helix lactose operon repressor KSO_012635 SM00382 ATPases associated with a variety of cellular activities KSO_012635 SM01086 C-terminal, D2-small domain, of ClpB protein KSO_012650 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_012655 SM00387 Histidine kinase-like ATPases KSO_012655 SM00388 His Kinase A (phosphoacceptor) domain KSO_012670 SM01007 Class II Aldolase and Adducin N-terminal domain KSO_012715 SM00091 PAS domain KSO_012715 SM00387 Histidine kinase-like ATPases KSO_012715 SM00388 His Kinase A (phosphoacceptor) domain KSO_012780 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen KSO_012795 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_012810 SM00422 helix_turn_helix, mercury resistance KSO_012815 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_012815 SM00924 MgtE intracellular N domain KSO_012830 SM00257 Lysin motif KSO_012830 SM00636 KSO_012830 KSO_012840 SM00382 ATPases associated with a variety of cellular activities KSO_012870 SM00100 Cyclic nucleotide-monophosphate binding domain KSO_012885 SM00028 Tetratricopeptide repeats KSO_012905 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_012920 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KSO_012960 SM00382 ATPases associated with a variety of cellular activities KSO_012970 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain KSO_012985 SM00382 ATPases associated with a variety of cellular activities KSO_013010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KSO_013070 SM00257 Lysin motif KSO_013070 SM00644 KSO_013070 KSO_013135 SM00257 Lysin motif KSO_013235 SM00382 ATPases associated with a variety of cellular activities KSO_013250 SM00530 Helix-turn-helix XRE-family like proteins KSO_013275 SM00257 Lysin motif KSO_013275 SM00644 KSO_013275 KSO_013285 SM00028 Tetratricopeptide repeats KSO_013300 SM01260 KSO_013300 KSO_013305 SM00382 ATPases associated with a variety of cellular activities KSO_013310 SM01260 KSO_013310 KSO_013320 SM00421 helix_turn_helix, Lux Regulon KSO_013320 SM00448 cheY-homologous receiver domain KSO_013345 SM00382 ATPases associated with a variety of cellular activities KSO_013350 SM00387 Histidine kinase-like ATPases KSO_013350 SM00388 His Kinase A (phosphoacceptor) domain KSO_013355 SM00448 cheY-homologous receiver domain KSO_013355 SM00862 Transcriptional regulatory protein, C terminal KSO_013360 SM00858 KSO_013360 KSO_013370 SM00354 helix_turn _helix lactose operon repressor KSO_013405 SM00382 ATPases associated with a variety of cellular activities KSO_013440 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KSO_013440 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KSO_013465 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_013480 SM00420 helix_turn_helix, Deoxyribose operon repressor KSO_013480 SM01134 KSO_013480 KSO_013520 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_013585 SM00257 Lysin motif KSO_013585 SM00644 KSO_013585 KSO_013715 SM00645 Papain family cysteine protease KSO_013780 SM00382 ATPases associated with a variety of cellular activities KSO_013840 SM00530 Helix-turn-helix XRE-family like proteins KSO_013845 SM00530 Helix-turn-helix XRE-family like proteins KSO_013895 SM00966 SpoVT / AbrB like domain KSO_013900 SM00382 ATPases associated with a variety of cellular activities KSO_013910 SM00849 Metallo-beta-lactamase superfamily KSO_014035 SM00954 Region found in RelA / SpoT proteins KSO_014045 SM01118 KSO_014045 KSO_014105 SM00382 ATPases associated with a variety of cellular activities KSO_014110 SM00382 ATPases associated with a variety of cellular activities KSO_014155 SM00382 ATPases associated with a variety of cellular activities KSO_014160 SM00382 ATPases associated with a variety of cellular activities KSO_014170 SM00825 Beta-ketoacyl synthase KSO_014225 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KSO_014230 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain KSO_014250 SM00859 Semialdehyde dehydrogenase, NAD binding domain KSO_014320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_014320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_014330 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_014365 SM00354 helix_turn _helix lactose operon repressor KSO_014370 SM00342 helix_turn_helix, arabinose operon control protein KSO_014495 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_014535 SM00894 Excalibur calcium-binding domain KSO_014560 SM00914 KSO_014560 KSO_014575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_014595 SM00855 Phosphoglycerate mutase family KSO_014640 SM00849 Metallo-beta-lactamase superfamily KSO_014725 SM00382 ATPases associated with a variety of cellular activities KSO_014755 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_014790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KSO_014810 SM00382 ATPases associated with a variety of cellular activities KSO_014845 SM00729 Elongator protein 3, MiaB family, Radical SAM KSO_014900 SM00382 ATPases associated with a variety of cellular activities KSO_014905 SM00382 ATPases associated with a variety of cellular activities KSO_014965 SM01091 Transporter associated domain KSO_014970 SM00825 Beta-ketoacyl synthase KSO_014985 SM01091 Transporter associated domain KSO_014990 SM00563 Phosphate acyltransferases KSO_015035 SM00257 Lysin motif KSO_015040 SM00098 Alkaline phosphatase homologues KSO_015060 SM00257 Lysin motif KSO_015080 SM00421 helix_turn_helix, Lux Regulon KSO_015080 SM00448 cheY-homologous receiver domain KSO_015085 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. KSO_015085 SM00387 Histidine kinase-like ATPases KSO_015130 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_015140 SM00363 S4 RNA-binding domain KSO_015180 SM00267 diguanylate cyclase KSO_015190 SM00357 Cold shock protein domain KSO_015200 SM00382 ATPases associated with a variety of cellular activities KSO_015205 SM00382 ATPases associated with a variety of cellular activities KSO_015210 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_015240 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_015250 SM00763 PrkA AAA domain KSO_015285 SM00567 E-Z type HEAT repeats KSO_015295 SM00530 Helix-turn-helix XRE-family like proteins KSO_015320 SM00062 Bacterial periplasmic substrate-binding proteins KSO_015325 SM00382 ATPases associated with a variety of cellular activities KSO_015340 SM01060 KSO_015340 KSO_015345 SM00382 ATPases associated with a variety of cellular activities KSO_015350 SM00382 ATPases associated with a variety of cellular activities KSO_015425 SM00382 ATPases associated with a variety of cellular activities KSO_015455 SM00478 endonuclease III KSO_015455 SM00525 KSO_015455 KSO_015485 SM00287 Bacterial SH3 domain homologues KSO_015555 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_015610 SM00382 ATPases associated with a variety of cellular activities KSO_015615 SM00382 ATPases associated with a variety of cellular activities KSO_015640 SM00382 ATPases associated with a variety of cellular activities KSO_015655 SM00861 Transketolase, pyrimidine binding domain KSO_015685 SM00478 endonuclease III KSO_015755 SM00226 Low molecular weight phosphatase family KSO_015780 SM00354 helix_turn _helix lactose operon repressor KSO_015810 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_015810 SM00866 KSO_015810 KSO_015815 SM00642 Alpha-amylase domain KSO_015895 SM00849 Metallo-beta-lactamase superfamily KSO_015910 SM00448 cheY-homologous receiver domain KSO_015915 SM00091 PAS domain KSO_015915 SM00387 Histidine kinase-like ATPases KSO_015930 SM00448 cheY-homologous receiver domain KSO_015930 SM00862 Transcriptional regulatory protein, C terminal KSO_015935 SM00387 Histidine kinase-like ATPases KSO_015935 SM00388 His Kinase A (phosphoacceptor) domain KSO_015935 SM00448 cheY-homologous receiver domain KSO_015960 SM00656 KSO_015960 KSO_015975 SM00829 Enoylreductase KSO_015990 SM00487 DEAD-like helicases superfamily KSO_015990 SM00490 helicase superfamily c-terminal domain KSO_015995 SM00382 ATPases associated with a variety of cellular activities KSO_016005 SM00422 helix_turn_helix, mercury resistance KSO_016010 SM00382 ATPases associated with a variety of cellular activities KSO_016025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KSO_016095 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_016195 SM00382 ATPases associated with a variety of cellular activities KSO_016210 SM00046 Diacylglycerol kinase catalytic domain (presumed) KSO_016225 SM00845 GatB domain KSO_016260 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KSO_016260 SM00292 breast cancer carboxy-terminal domain KSO_016260 SM00532 Ligase N family KSO_016305 SM01209 KSO_016305 KSO_016305 SM01210 KSO_016305 KSO_016310 SM00798 AICARFT/IMPCHase bienzyme KSO_016310 SM00851 MGS-like domain KSO_016335 SM01211 KSO_016335 KSO_016350 SM00998 Adenylosuccinate lyase C-terminus KSO_016360 SM01001 AIR carboxylase KSO_016400 SM00460 Transglutaminase/protease-like homologues KSO_016445 SM00829 Enoylreductase KSO_016500 SM00829 Enoylreductase KSO_016505 SM00028 Tetratricopeptide repeats KSO_016505 SM00382 ATPases associated with a variety of cellular activities KSO_016535 SM00883 Chaperonin 10 Kd subunit KSO_016560 SM00881 CoA binding domain KSO_016570 SM00382 ATPases associated with a variety of cellular activities KSO_016605 SM00829 Enoylreductase KSO_016645 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_016645 SM00895 KSO_016645 KSO_016650 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_016650 SM00866 KSO_016650 KSO_016695 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_016695 SM00895 KSO_016695 KSO_016700 SM01329 KSO_016700 KSO_016720 SM00422 helix_turn_helix, mercury resistance KSO_016735 SM00530 Helix-turn-helix XRE-family like proteins KSO_016740 SM00825 Beta-ketoacyl synthase KSO_016765 SM00382 ATPases associated with a variety of cellular activities KSO_016780 SM00421 helix_turn_helix, Lux Regulon KSO_016780 SM00448 cheY-homologous receiver domain KSO_016785 SM00387 Histidine kinase-like ATPases KSO_016840 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_016850 SM00422 helix_turn_helix, mercury resistance KSO_016855 SM00829 Enoylreductase KSO_016880 SM01130 KSO_016880 KSO_016945 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_016955 SM00342 helix_turn_helix, arabinose operon control protein KSO_016975 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_016975 SM00895 KSO_016975 KSO_017020 SM00450 Rhodanese Homology Domain KSO_017020 SM00849 Metallo-beta-lactamase superfamily KSO_017025 SM00450 Rhodanese Homology Domain KSO_017030 SM00450 Rhodanese Homology Domain KSO_017045 SM00357 Cold shock protein domain KSO_017075 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_017110 SM00860 SMI1 / KNR4 family KSO_017115 SM00901 KSO_017115 KSO_017145 SM00731 SprT homologues. KSO_017155 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_017155 SM00732 Likely ribonuclease with RNase H fold. KSO_017160 SM00331 Sigma factor PP2C-like phosphatases KSO_017160 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KSO_017180 SM00331 Sigma factor PP2C-like phosphatases KSO_017185 SM00387 Histidine kinase-like ATPases KSO_017210 SM01005 Alanine racemase, C-terminal domain KSO_017240 SM00487 DEAD-like helicases superfamily KSO_017240 SM00490 helicase superfamily c-terminal domain KSO_017295 SM00382 ATPases associated with a variety of cellular activities KSO_017310 SM00448 cheY-homologous receiver domain KSO_017315 SM00091 PAS domain KSO_017315 SM00387 Histidine kinase-like ATPases KSO_017430 SM00267 diguanylate cyclase KSO_017440 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KSO_017440 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KSO_017440 SM00493 KSO_017440 KSO_017445 SM00344 helix_turn_helix ASNC type KSO_017515 SM00346 helix_turn_helix isocitrate lyase regulation KSO_017520 SM00797 Allophanate hydrolase subunit 2 KSO_017525 SM00796 Allophanate hydrolase subunit 1 KSO_017580 SM00420 helix_turn_helix, Deoxyribose operon repressor KSO_017620 SM00345 helix_turn_helix gluconate operon transcriptional repressor KSO_017625 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KSO_017655 SM00382 ATPases associated with a variety of cellular activities KSO_017680 SM00028 Tetratricopeptide repeats KSO_017690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KSO_017690 SM00387 Histidine kinase-like ATPases KSO_017690 SM00388 His Kinase A (phosphoacceptor) domain KSO_017695 SM00448 cheY-homologous receiver domain KSO_017695 SM00862 Transcriptional regulatory protein, C terminal KSO_017705 SM00382 ATPases associated with a variety of cellular activities KSO_017720 SM00382 ATPases associated with a variety of cellular activities KSO_017730 SM00062 Bacterial periplasmic substrate-binding proteins KSO_017765 SM00710 Parallel beta-helix repeats KSO_017765 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses KSO_017800 SM00062 Bacterial periplasmic substrate-binding proteins KSO_017810 SM00382 ATPases associated with a variety of cellular activities KSO_017840 SM00823 Phosphopantetheine attachment site KSO_017845 SM00823 Phosphopantetheine attachment site KSO_017855 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family KSO_017900 SM00833 Cobalamin synthesis protein cobW C-terminal domain KSO_018005 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_018020 SM00632 KSO_018020 KSO_018020 SM00642 Alpha-amylase domain KSO_018050 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_018050 SM00382 ATPases associated with a variety of cellular activities KSO_018100 SM00382 ATPases associated with a variety of cellular activities KSO_018110 SM00642 Alpha-amylase domain KSO_018120 SM00028 Tetratricopeptide repeats KSO_018250 SM00448 cheY-homologous receiver domain KSO_018255 SM00387 Histidine kinase-like ATPases KSO_018290 SM00450 Rhodanese Homology Domain KSO_018325 SM00530 Helix-turn-helix XRE-family like proteins KSO_018415 SM00382 ATPases associated with a variety of cellular activities KSO_018420 SM00421 helix_turn_helix, Lux Regulon KSO_018420 SM00448 cheY-homologous receiver domain KSO_018440 SM00347 helix_turn_helix multiple antibiotic resistance protein KSO_018555 SM00342 helix_turn_helix, arabinose operon control protein KSO_018590 SM00829 Enoylreductase KSO_018615 SM01251 KSO_018615 KSO_018630 SM00646 KSO_018630 KSO_018670 SM00382 ATPases associated with a variety of cellular activities KSO_018675 SM00382 ATPases associated with a variety of cellular activities KSO_018685 SM00662 RNA polymerases D KSO_018705 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_018765 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KSO_018770 SM01374 KSO_018770 KSO_018790 SM00322 K homology RNA-binding domain KSO_018805 SM01382 KSO_018805 KSO_018805 SM01383 KSO_018805 KSO_018825 SM01403 KSO_018825 KSO_018840 SM00838 Elongation factor G C-terminus KSO_018840 SM00889 Elongation factor G, domain IV KSO_018860 SM00663 RNA polymerase I subunit A N-terminus KSO_018890 SM00649 Ribosomal protein L11/L12 KSO_018895 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. KSO_018895 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KSO_018920 SM00967 RNA 2'-O ribose methyltransferase substrate binding KSO_018925 SM00535 Ribonuclease III family KSO_018930 SM00840 KSO_018930 KSO_018955 SM00670 Large family of predicted nucleotide-binding domains KSO_018965 SM00382 ATPases associated with a variety of cellular activities KSO_018970 SM00382 ATPases associated with a variety of cellular activities KSO_018970 SM01086 C-terminal, D2-small domain, of ClpB protein KSO_019000 SM00530 Helix-turn-helix XRE-family like proteins KSO_019010 SM00905 Dihydroneopterin aldolase KSO_019055 SM00382 ATPases associated with a variety of cellular activities KSO_019065 SM00977 TilS substrate C-terminal domain KSO_019070 SM00220 Serine/Threonine protein kinases, catalytic domain KSO_019080 SM00331 Sigma factor PP2C-like phosphatases KSO_019080 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KSO_019085 SM00316 Ribosomal protein S1-like RNA-binding domain KSO_019105 SM00363 S4 RNA-binding domain KSO_019120 SM00966 SpoVT / AbrB like domain KSO_019125 SM00487 DEAD-like helicases superfamily KSO_019125 SM00490 helicase superfamily c-terminal domain KSO_019125 SM00982 KSO_019125 KSO_019125 SM01058 CarD-like/TRCF domain KSO_019145 SM01400 KSO_019145 KSO_019190 SM00650 Ribosomal RNA adenine dimethylases KSO_019195 SM00493 KSO_019195 KSO_019200 SM01208 KSO_019200 KSO_019215 SM00966 SpoVT / AbrB like domain KSO_019225 SM00465 GIY-YIG type nucleases (URI domain) KSO_019300 SM00493 KSO_019300 KSO_019310 SM00382 ATPases associated with a variety of cellular activities KSO_019325 SM00257 Lysin motif KSO_019325 SM00636 KSO_019325 KSO_019360 SM00936 Penicillin-binding protein 5, C-terminal domain KSO_019365 SM00116 Domain in cystathionine beta-synthase and other proteins. KSO_019365 SM01240 KSO_019365 KSO_019375 SM00434 DNA Topoisomerase IV KSO_019380 SM00387 Histidine kinase-like ATPases KSO_019380 SM00433 TopoisomeraseII KSO_019400 SM00480 DNA polymerase III beta subunit KSO_019405 SM00382 ATPases associated with a variety of cellular activities KSO_019405 SM00760 Bacterial dnaA protein helix-turn-helix domain KSO_p19332 SM00028 Tetratricopeptide repeats