locus-tag class description KHU1_0001 PF07690 Major Facilitator Superfamily KHU1_0002 PF00202 Aminotransferase class-III KHU1_0005 PF00916 Sulfate permease family KHU1_0005 PF01740 STAS domain KHU1_0006 PF01758 Sodium Bile acid symporter family KHU1_0007 PF00756 Putative esterase KHU1_0008 PF01032 FecCD transport family KHU1_0009 PF01032 FecCD transport family KHU1_0010 PF01497 Periplasmic binding protein KHU1_0011 PF01497 Periplasmic binding protein KHU1_0011 PF12833 Helix-turn-helix domain KHU1_0012 PF12833 Helix-turn-helix domain KHU1_0012 PF01497 Periplasmic binding protein KHU1_0013 PF07075 Protein of unknown function (DUF1343) KHU1_0014 PF01915 Glycosyl hydrolase family 3 C-terminal domain KHU1_0014 PF00933 Glycosyl hydrolase family 3 N terminal domain KHU1_0015 PF00144 Beta-lactamase KHU1_0016 PF00367 phosphotransferase system, EIIB KHU1_0016 PF02378 Phosphotransferase system, EIIC KHU1_0017 PF01380 SIS domain KHU1_0019 PF04463 Protein of unknown function (DUF523) KHU1_0020 PF08281 Sigma-70, region 4 KHU1_0020 PF04542 Sigma-70 region 2 KHU1_0021 PF13490 Putative zinc-finger KHU1_0022 PF02457 DisA bacterial checkpoint controller nucleotide-binding KHU1_0023 PF07949 YbbR-like protein KHU1_0024 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KHU1_0024 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KHU1_0024 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KHU1_0024 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KHU1_0025 PF01380 SIS domain KHU1_0028 PF16226 Domain of unknown function (DUF4885) KHU1_0029 PF00248 Aldo/keto reductase family KHU1_0030 PF04172 LrgB-like family KHU1_0031 PF03788 LrgA family KHU1_0032 PF01047 MarR family KHU1_0033 PF00324 Amino acid permease KHU1_0034 PF13419 Haloacid dehalogenase-like hydrolase KHU1_0035 PF07730 Histidine kinase KHU1_0036 PF00072 Response regulator receiver domain KHU1_0036 PF00196 Bacterial regulatory proteins, luxR family KHU1_0037 PF00005 ABC transporter KHU1_0041 PF17334 Minor curli fiber component A KHU1_0044 PF13520 Amino acid permease KHU1_0047 PF10852 Protein of unknown function (DUF2651) KHU1_0048 PF03009 Glycerophosphoryl diester phosphodiesterase family KHU1_0049 PF07690 Major Facilitator Superfamily KHU1_0050 PF10852 Protein of unknown function (DUF2651) KHU1_0051 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal KHU1_0051 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal KHU1_0053 PF01471 Putative peptidoglycan binding domain KHU1_0053 PF08924 Domain of unknown function (DUF1906) KHU1_0056 PF00465 Iron-containing alcohol dehydrogenase KHU1_0057 PF02222 ATP-grasp domain KHU1_0058 PF01066 CDP-alcohol phosphatidyltransferase KHU1_0059 PF09335 SNARE associated Golgi protein KHU1_0060 PF02666 Phosphatidylserine decarboxylase KHU1_0063 PF00375 Sodium:dicarboxylate symporter family KHU1_0064 PF01063 Amino-transferase class IV KHU1_0065 PF00324 Amino acid permease KHU1_0066 PF02574 Homocysteine S-methyltransferase KHU1_0067 PF01235 Sodium:alanine symporter family KHU1_0068 PF04960 Glutaminase KHU1_0069 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_0070 PF08664 YcbB domain KHU1_0070 PF00072 Response regulator receiver domain KHU1_0071 PF01636 Phosphotransferase enzyme family KHU1_0072 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein KHU1_0074 PF16916 Dimerisation domain of Zinc Transporter KHU1_0074 PF01545 Cation efflux family KHU1_0075 PF00881 Nitroreductase family KHU1_0076 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHU1_0077 PF07681 DoxX KHU1_0078 PF00085 Thioredoxin KHU1_0079 PF10710 Protein of unknown function (DUF2512) KHU1_0080 PF07486 Cell Wall Hydrolase KHU1_0081 PF16655 PhoD-like phosphatase, N-terminal domain KHU1_0081 PF09423 PhoD-like phosphatase KHU1_0082 PF02416 mttA/Hcf106 family KHU1_0083 PF00902 Sec-independent protein translocase protein (TatC) KHU1_0084 PF01470 Pyroglutamyl peptidase KHU1_0085 PF00266 Aminotransferase class-V KHU1_0086 PF07690 Major Facilitator Superfamily KHU1_0087 PF00440 Bacterial regulatory proteins, tetR family KHU1_0088 PF17763 Glutaminase/Asparaginase C-terminal domain KHU1_0088 PF00710 Asparaginase, N-terminal KHU1_0089 PF01674 Lipase (class 2) KHU1_0090 PF02810 SEC-C motif KHU1_0090 PF05225 helix-turn-helix, Psq domain KHU1_0091 PF00248 Aldo/keto reductase family KHU1_0092 PF11611 Domain of unknown function (DUF4352) KHU1_0092 PF17118 Domain of unknown function (DUF5105) KHU1_0093 PF16244 Domain of unknown function (DUF4901) KHU1_0094 PF16244 Domain of unknown function (DUF4901) KHU1_0095 PF13539 D-alanyl-D-alanine carboxypeptidase KHU1_0096 PF18801 response regulator aspartate phosphatase H, N terminal KHU1_0098 PF00128 Alpha amylase, catalytic domain KHU1_0099 PF01297 Zinc-uptake complex component A periplasmic KHU1_0100 PF00005 ABC transporter KHU1_0101 PF00950 ABC 3 transport family KHU1_0102 PF00296 Luciferase-like monooxygenase KHU1_0103 PF02342 TerD domain KHU1_0104 PF02342 TerD domain KHU1_0105 PF02342 TerD domain KHU1_0106 PF03741 Integral membrane protein TerC family KHU1_0107 PF14266 Putative component of 'biosynthetic module' KHU1_0108 PF05816 Toxic anion resistance protein (TelA) KHU1_0109 PF07690 Major Facilitator Superfamily KHU1_0110 PF00571 CBS domain KHU1_0110 PF00005 ABC transporter KHU1_0111 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_0112 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KHU1_0113 PF01546 Peptidase family M20/M25/M40 KHU1_0113 PF07687 Peptidase dimerisation domain KHU1_0114 PF03606 C4-dicarboxylate anaerobic carrier KHU1_0116 PF16738 Starch-binding module 26 KHU1_0116 PF00128 Alpha amylase, catalytic domain KHU1_0117 PF00056 lactate/malate dehydrogenase, NAD binding domain KHU1_0117 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KHU1_0118 PF07690 Major Facilitator Superfamily KHU1_0119 PF01047 MarR family KHU1_0120 PF01810 LysE type translocator KHU1_0121 PF08892 YqcI/YcgG family KHU1_0122 PF00324 Amino acid permease KHU1_0123 PF09347 Domain of unknown function (DUF1989) KHU1_0124 PF02540 NAD synthase KHU1_0125 PF12197 Bacillus cereus group antimicrobial protein KHU1_0126 PF01261 Xylose isomerase-like TIM barrel KHU1_0127 PF07690 Major Facilitator Superfamily KHU1_0128 PF01202 Shikimate kinase KHU1_0129 PF05448 Acetyl xylan esterase (AXE1) KHU1_0130 PF10127 RNA repair pathway DNA polymerase beta family KHU1_0131 PF01619 Proline dehydrogenase KHU1_0132 PF00171 Aldehyde dehydrogenase family KHU1_0133 PF00474 Sodium:solute symporter family KHU1_0134 PF17853 GGDEF-like domain KHU1_0134 PF13556 PucR C-terminal helix-turn-helix domain KHU1_0135 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHU1_0136 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KHU1_0137 PF00355 Rieske [2Fe-2S] domain KHU1_0138 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KHU1_0138 PF04324 BFD-like [2Fe-2S] binding domain KHU1_0138 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KHU1_0138 PF18267 Rubredoxin NAD+ reductase C-terminal domain KHU1_0138 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHU1_0139 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KHU1_0139 PF00384 Molybdopterin oxidoreductase KHU1_0139 PF01568 Molydopterin dinucleotide binding domain KHU1_0140 PF18267 Rubredoxin NAD+ reductase C-terminal domain KHU1_0140 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KHU1_0140 PF04324 BFD-like [2Fe-2S] binding domain KHU1_0140 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHU1_0141 PF07690 Major Facilitator Superfamily KHU1_0142 PF02492 CobW/HypB/UreG, nucleotide-binding domain KHU1_0142 PF07683 Cobalamin synthesis protein cobW C-terminal domain KHU1_0143 PF08240 Alcohol dehydrogenase GroES-like domain KHU1_0143 PF00107 Zinc-binding dehydrogenase KHU1_0143 PF13823 Alcohol dehydrogenase GroES-associated KHU1_0144 PF06271 RDD family KHU1_0145 PF10925 Protein of unknown function (DUF2680) KHU1_0146 PF00232 Glycosyl hydrolase family 1 KHU1_0147 PF11033 Competence protein J (ComJ) KHU1_0148 PF14040 Deoxyribonuclease NucA/NucB KHU1_0149 PF01380 SIS domain KHU1_0150 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KHU1_0151 PF01638 HxlR-like helix-turn-helix KHU1_0153 PF13193 AMP-binding enzyme C-terminal domain KHU1_0153 PF00501 AMP-binding enzyme KHU1_0153 PF00550 Phosphopantetheine attachment site KHU1_0153 PF00668 Condensation domain KHU1_0154 PF00550 Phosphopantetheine attachment site KHU1_0154 PF13193 AMP-binding enzyme C-terminal domain KHU1_0154 PF00668 Condensation domain KHU1_0154 PF00501 AMP-binding enzyme KHU1_0155 PF13193 AMP-binding enzyme C-terminal domain KHU1_0155 PF00501 AMP-binding enzyme KHU1_0155 PF00975 Thioesterase domain KHU1_0155 PF00550 Phosphopantetheine attachment site KHU1_0155 PF00668 Condensation domain KHU1_0156 PF00975 Thioesterase domain KHU1_0157 PF07685 CobB/CobQ-like glutamine amidotransferase domain KHU1_0157 PF00155 Aminotransferase class I and II KHU1_0157 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KHU1_0159 PF00892 EamA-like transporter family KHU1_0160 PF00155 Aminotransferase class I and II KHU1_0160 PF00392 Bacterial regulatory proteins, gntR family KHU1_0161 PF01648 4'-phosphopantetheinyl transferase superfamily KHU1_0163 PF00005 ABC transporter KHU1_0164 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_0165 PF00497 Bacterial extracellular solute-binding proteins, family 3 KHU1_0166 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_0166 PF03466 LysR substrate binding domain KHU1_0167 PF02441 Flavoprotein KHU1_0168 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KHU1_0171 PF00854 POT family KHU1_0172 PF13229 Right handed beta helix region KHU1_0172 PF12708 Pectate lyase superfamily protein KHU1_0174 PF03323 Bacillus/Clostridium GerA spore germination protein KHU1_0175 PF05504 Spore germination B3/ GerAC like, C-terminal KHU1_0176 PF03845 Spore germination protein KHU1_0179 PF00497 Bacterial extracellular solute-binding proteins, family 3 KHU1_0180 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_0181 PF00005 ABC transporter KHU1_0183 PF03972 MmgE/PrpD family KHU1_0184 PF00005 ABC transporter KHU1_0185 PF12704 MacB-like periplasmic core domain KHU1_0185 PF02687 FtsX-like permease family KHU1_0186 PF00072 Response regulator receiver domain KHU1_0186 PF00486 Transcriptional regulatory protein, C terminal KHU1_0187 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_0187 PF00672 HAMP domain KHU1_0187 PF00512 His Kinase A (phospho-acceptor) domain KHU1_0188 PF18801 response regulator aspartate phosphatase H, N terminal KHU1_0189 PF11131 Rap-phr extracellular signalling KHU1_0190 PF00696 Amino acid kinase family KHU1_0190 PF13840 ACT domain KHU1_0191 PF01032 FecCD transport family KHU1_0192 PF01032 FecCD transport family KHU1_0193 PF00005 ABC transporter KHU1_0194 PF01497 Periplasmic binding protein KHU1_0195 PF07690 Major Facilitator Superfamily KHU1_0196 PF00440 Bacterial regulatory proteins, tetR family KHU1_0197 PF00881 Nitroreductase family KHU1_0198 PF03992 Antibiotic biosynthesis monooxygenase KHU1_0199 PF01022 Bacterial regulatory protein, arsR family KHU1_0200 PF00155 Aminotransferase class I and II KHU1_0200 PF00392 Bacterial regulatory proteins, gntR family KHU1_0201 PF00202 Aminotransferase class-III KHU1_0202 PF00171 Aldehyde dehydrogenase family KHU1_0203 PF06800 Sugar transport protein KHU1_0205 PF07987 Domain of unkown function (DUF1775) KHU1_0206 PF04234 CopC domain KHU1_0206 PF13115 YtkA-like KHU1_0206 PF05425 Copper resistance protein D KHU1_0207 PF08220 DeoR-like helix-turn-helix domain KHU1_0207 PF05573 NosL KHU1_0209 PF02378 Phosphotransferase system, EIIC KHU1_0209 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KHU1_0210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KHU1_0211 PF08125 Mannitol dehydrogenase C-terminal domain KHU1_0211 PF01232 Mannitol dehydrogenase Rossmann domain KHU1_0212 PF07977 FabA-like domain KHU1_0214 PF03746 LamB/YcsF family KHU1_0215 PF01566 Natural resistance-associated macrophage protein KHU1_0216 PF07286 Protein of unknown function (DUF1445) KHU1_0217 PF02682 Carboxyltransferase domain, subdomain C and D KHU1_0218 PF02626 Carboxyltransferase domain, subdomain A and B KHU1_0219 PF01614 Bacterial transcriptional regulator KHU1_0219 PF09339 IclR helix-turn-helix domain KHU1_0220 PF13472 GDSL-like Lipase/Acylhydrolase family KHU1_0221 PF03992 Antibiotic biosynthesis monooxygenase KHU1_0222 PF05223 NTF2-like N-terminal transpeptidase domain KHU1_0222 PF03717 Penicillin-binding Protein dimerisation domain KHU1_0222 PF00905 Penicillin binding protein transpeptidase domain KHU1_0223 PF00248 Aldo/keto reductase family KHU1_0224 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KHU1_0224 PF00874 PRD domain KHU1_0224 PF08279 HTH domain KHU1_0224 PF05043 Mga helix-turn-helix domain KHU1_0224 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KHU1_0225 PF13193 AMP-binding enzyme C-terminal domain KHU1_0225 PF00501 AMP-binding enzyme KHU1_0228 PF13302 Acetyltransferase (GNAT) domain KHU1_0229 PF16242 Pyridoxamine 5'-phosphate oxidase like KHU1_0230 PF10997 Alternate to MurJ KHU1_0231 PF12823 Domain of unknown function (DUF3817) KHU1_0232 PF01037 Lrp/AsnC ligand binding domain KHU1_0233 PF01751 Toprim domain KHU1_0233 PF01131 DNA topoisomerase KHU1_0235 PF00990 Diguanylate cyclase, GGDEF domain KHU1_0236 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KHU1_0238 PF03170 Bacterial cellulose synthase subunit KHU1_0239 PF13520 Amino acid permease KHU1_0240 PF00293 NUDIX domain KHU1_0241 PF00205 Thiamine pyrophosphate enzyme, central domain KHU1_0241 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KHU1_0241 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KHU1_0244 PF10844 Protein of unknown function (DUF2577) KHU1_0245 PF01177 Asp/Glu/Hydantoin racemase KHU1_0246 PF10934 Protein of unknown function (DUF2634) KHU1_0250 PF01566 Natural resistance-associated macrophage protein KHU1_0253 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) KHU1_0254 PF17314 Family of unknown function (DUF5360) KHU1_0255 PF00893 Small Multidrug Resistance protein KHU1_0256 PF12787 EcsC protein family KHU1_0257 PF00477 Small hydrophilic plant seed protein KHU1_0257 PF10685 Stress-induced bacterial acidophilic repeat motif KHU1_0258 PF07883 Cupin domain KHU1_0259 PF16291 Domain of unknown function (DUF4937 KHU1_0260 PF05067 Manganese containing catalase KHU1_0261 PF03480 Bacterial extracellular solute-binding protein, family 7 KHU1_0262 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KHU1_0262 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_0262 PF17203 Single cache domain 3 KHU1_0263 PF08279 HTH domain KHU1_0263 PF00072 Response regulator receiver domain KHU1_0264 PF00375 Sodium:dicarboxylate symporter family KHU1_0265 PF01594 AI-2E family transporter KHU1_0266 PF00005 ABC transporter KHU1_0269 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KHU1_0269 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KHU1_0269 PF02770 Acyl-CoA dehydrogenase, middle domain KHU1_0270 PF01545 Cation efflux family KHU1_0270 PF16916 Dimerisation domain of Zinc Transporter KHU1_0271 PF00085 Thioredoxin KHU1_0272 PF01820 D-ala D-ala ligase N-terminus KHU1_0272 PF07478 D-ala D-ala ligase C-terminus KHU1_0273 PF01225 Mur ligase family, catalytic domain KHU1_0273 PF02875 Mur ligase family, glutamate ligase domain KHU1_0273 PF08245 Mur ligase middle domain KHU1_0274 PF00271 Helicase conserved C-terminal domain KHU1_0274 PF00270 DEAD/DEAH box helicase KHU1_0275 PF03703 Bacterial PH domain KHU1_0276 PF03703 Bacterial PH domain KHU1_0277 PF01694 Rhomboid family KHU1_0278 PF01648 4'-phosphopantetheinyl transferase superfamily KHU1_0280 PF00842 Alanine racemase, C-terminal domain KHU1_0280 PF01168 Alanine racemase, N-terminal domain KHU1_0281 PF01402 Ribbon-helix-helix protein, copG family KHU1_0282 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KHU1_0283 PF08678 Rsbr N terminal KHU1_0283 PF01740 STAS domain KHU1_0284 PF01740 STAS domain KHU1_0285 PF13581 Histidine kinase-like ATPase domain KHU1_0286 PF07228 Stage II sporulation protein E (SpoIIE) KHU1_0286 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain KHU1_0287 PF01740 STAS domain KHU1_0288 PF13581 Histidine kinase-like ATPase domain KHU1_0289 PF04545 Sigma-70, region 4 KHU1_0289 PF04539 Sigma-70 region 3 KHU1_0289 PF04542 Sigma-70 region 2 KHU1_0290 PF07228 Stage II sporulation protein E (SpoIIE) KHU1_0291 PF16921 Tex protein YqgF-like domain KHU1_0291 PF00575 S1 RNA binding domain KHU1_0291 PF17674 HHH domain KHU1_0291 PF09371 Tex-like protein N-terminal domain KHU1_0292 PF10263 SprT-like family KHU1_0295 PF02082 Transcriptional regulator KHU1_0296 PF02525 Flavodoxin-like fold KHU1_0297 PF02525 Flavodoxin-like fold KHU1_0299 PF07690 Major Facilitator Superfamily KHU1_0300 PF01047 MarR family KHU1_0301 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) KHU1_0302 PF01575 MaoC like domain KHU1_0304 PF02082 Transcriptional regulator KHU1_0305 PF13460 NAD(P)H-binding KHU1_0306 PF00440 Bacterial regulatory proteins, tetR family KHU1_0307 PF00106 short chain dehydrogenase KHU1_0308 PF08240 Alcohol dehydrogenase GroES-like domain KHU1_0308 PF00107 Zinc-binding dehydrogenase KHU1_0309 PF00487 Fatty acid desaturase KHU1_0310 PF00313 'Cold-shock' DNA-binding domain KHU1_0311 PF02559 CarD-like/TRCF domain KHU1_0315 PF00583 Acetyltransferase (GNAT) family KHU1_0315 PF01047 MarR family KHU1_0316 PF07690 Major Facilitator Superfamily KHU1_0317 PF01734 Patatin-like phospholipase KHU1_0319 PF07883 Cupin domain KHU1_0321 PF01565 FAD binding domain KHU1_0321 PF08031 Berberine and berberine like KHU1_0323 PF01545 Cation efflux family KHU1_0323 PF16916 Dimerisation domain of Zinc Transporter KHU1_0326 PF00701 Dihydrodipicolinate synthetase family KHU1_0328 PF04055 Radical SAM superfamily KHU1_0332 PF13649 Methyltransferase domain KHU1_0333 PF08543 Phosphomethylpyrimidine kinase KHU1_0334 PF13344 Haloacid dehalogenase-like hydrolase KHU1_0334 PF00293 NUDIX domain KHU1_0336 PF08240 Alcohol dehydrogenase GroES-like domain KHU1_0336 PF00107 Zinc-binding dehydrogenase KHU1_0337 PF13411 MerR HTH family regulatory protein KHU1_0339 PF00155 Aminotransferase class I and II KHU1_0339 PF00392 Bacterial regulatory proteins, gntR family KHU1_0342 PF07690 Major Facilitator Superfamily KHU1_0343 PF00440 Bacterial regulatory proteins, tetR family KHU1_0343 PF16859 Tetracyclin repressor-like, C-terminal domain KHU1_0344 PF00892 EamA-like transporter family KHU1_0345 PF00392 Bacterial regulatory proteins, gntR family KHU1_0345 PF00155 Aminotransferase class I and II KHU1_0346 PF07875 Coat F domain KHU1_0348 PF00107 Zinc-binding dehydrogenase KHU1_0348 PF13823 Alcohol dehydrogenase GroES-associated KHU1_0348 PF08240 Alcohol dehydrogenase GroES-like domain KHU1_0349 PF07875 Coat F domain KHU1_0352 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_0352 PF07730 Histidine kinase KHU1_0353 PF00196 Bacterial regulatory proteins, luxR family KHU1_0353 PF00072 Response regulator receiver domain KHU1_0354 PF03176 MMPL family KHU1_0355 PF07722 Peptidase C26 KHU1_0357 PF13302 Acetyltransferase (GNAT) domain KHU1_0358 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHU1_0358 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHU1_0359 PF00465 Iron-containing alcohol dehydrogenase KHU1_0360 PF07690 Major Facilitator Superfamily KHU1_0361 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_0361 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_0363 PF01925 Sulfite exporter TauE/SafE KHU1_0364 PF00583 Acetyltransferase (GNAT) family KHU1_0365 PF13411 MerR HTH family regulatory protein KHU1_0365 PF06445 GyrI-like small molecule binding domain KHU1_0366 PF00892 EamA-like transporter family KHU1_0367 PF00293 NUDIX domain KHU1_0368 PF08241 Methyltransferase domain KHU1_0369 PF00180 Isocitrate/isopropylmalate dehydrogenase KHU1_0370 PF07729 FCD domain KHU1_0370 PF00392 Bacterial regulatory proteins, gntR family KHU1_0371 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KHU1_0374 PF11954 Domain of unknown function (DUF3471) KHU1_0374 PF00144 Beta-lactamase KHU1_0375 PF07563 Protein of unknown function (DUF1541) KHU1_0376 PF07690 Major Facilitator Superfamily KHU1_0377 PF00392 Bacterial regulatory proteins, gntR family KHU1_0377 PF07702 UTRA domain KHU1_0378 PF00392 Bacterial regulatory proteins, gntR family KHU1_0378 PF07729 FCD domain KHU1_0379 PF07690 Major Facilitator Superfamily KHU1_0380 PF00893 Small Multidrug Resistance protein KHU1_0381 PF00893 Small Multidrug Resistance protein KHU1_0382 PF00440 Bacterial regulatory proteins, tetR family KHU1_0382 PF17934 Tetracyclin repressor-like, C-terminal domain KHU1_0383 PF13520 Amino acid permease KHU1_0385 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KHU1_0386 PF00107 Zinc-binding dehydrogenase KHU1_0386 PF08240 Alcohol dehydrogenase GroES-like domain KHU1_0387 PF00083 Sugar (and other) transporter KHU1_0388 PF00586 AIR synthase related protein, N-terminal domain KHU1_0388 PF02769 AIR synthase related protein, C-terminal domain KHU1_0389 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KHU1_0390 PF00814 Glycoprotease family KHU1_0391 PF00583 Acetyltransferase (GNAT) family KHU1_0392 PF00814 Glycoprotease family KHU1_0393 PF16326 ABC transporter C-terminal domain KHU1_0393 PF12848 ABC transporter KHU1_0393 PF00005 ABC transporter KHU1_0394 PF01967 MoaC family KHU1_0395 PF02629 CoA binding domain KHU1_0395 PF06971 Putative DNA-binding protein N-terminus KHU1_0396 PF02416 mttA/Hcf106 family KHU1_0397 PF00902 Sec-independent protein translocase protein (TatC) KHU1_0398 PF14146 Domain of unknown function (DUF4305) KHU1_0399 PF02517 CPBP intramembrane metalloprotease KHU1_0400 PF00166 Chaperonin 10 Kd subunit KHU1_0401 PF00118 TCP-1/cpn60 chaperonin family KHU1_0403 PF00931 NB-ARC domain KHU1_0403 PF13176 Tetratricopeptide repeat KHU1_0404 PF00107 Zinc-binding dehydrogenase KHU1_0404 PF08240 Alcohol dehydrogenase GroES-like domain KHU1_0406 PF00294 pfkB family carbohydrate kinase KHU1_0407 PF14154 Domain of unknown function (DUF4306) KHU1_0408 PF04012 PspA/IM30 family KHU1_0409 PF08271 TFIIB zinc-binding KHU1_0410 PF04536 TPM domain KHU1_0411 PF13421 SPFH domain-Band 7 family KHU1_0412 PF01757 Acyltransferase family KHU1_0413 PF13739 Deacetylase PdaC KHU1_0413 PF11738 Protein of unknown function (DUF3298) KHU1_0414 PF08281 Sigma-70, region 4 KHU1_0414 PF04542 Sigma-70 region 2 KHU1_0415 PF08240 Alcohol dehydrogenase GroES-like domain KHU1_0415 PF00107 Zinc-binding dehydrogenase KHU1_0416 PF03330 Lytic transglycolase KHU1_0417 PF07676 WD40-like Beta Propeller Repeat KHU1_0418 PF14169 Cold-inducible protein YdjO KHU1_0419 PF07731 Multicopper oxidase KHU1_0419 PF07732 Multicopper oxidase KHU1_0419 PF00394 Multicopper oxidase KHU1_0420 PF00324 Amino acid permease KHU1_0421 PF01545 Cation efflux family KHU1_0421 PF16916 Dimerisation domain of Zinc Transporter KHU1_0422 PF17863 AAA lid domain KHU1_0422 PF07726 ATPase family associated with various cellular activities (AAA) KHU1_0423 PF01882 Protein of unknown function DUF58 KHU1_0424 PF11992 Domain of unknown function (DUF3488) KHU1_0424 PF13559 Domain of unknown function (DUF4129) KHU1_0424 PF01841 Transglutaminase-like superfamily KHU1_0425 PF02540 NAD synthase KHU1_0425 PF00958 GMP synthase C terminal domain KHU1_0425 PF00117 Glutamine amidotransferase class-I KHU1_0427 PF04545 Sigma-70, region 4 KHU1_0427 PF04542 Sigma-70 region 2 KHU1_0429 PF00860 Permease family KHU1_0431 PF13076 Fur-regulated basic protein A KHU1_0432 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHU1_0433 PF14044 NETI protein KHU1_0435 PF00731 AIR carboxylase KHU1_0436 PF02222 ATP-grasp domain KHU1_0436 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KHU1_0437 PF10397 Adenylosuccinate lyase C-terminus KHU1_0437 PF00206 Lyase KHU1_0438 PF01259 SAICAR synthetase KHU1_0439 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KHU1_0441 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KHU1_0441 PF02769 AIR synthase related protein, C-terminal domain KHU1_0441 PF00586 AIR synthase related protein, N-terminal domain KHU1_0442 PF00156 Phosphoribosyl transferase domain KHU1_0443 PF00586 AIR synthase related protein, N-terminal domain KHU1_0443 PF02769 AIR synthase related protein, C-terminal domain KHU1_0444 PF00551 Formyl transferase KHU1_0445 PF01808 AICARFT/IMPCHase bienzyme KHU1_0445 PF02142 MGS-like domain KHU1_0446 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KHU1_0446 PF02844 Phosphoribosylglycinamide synthetase, N domain KHU1_0446 PF02843 Phosphoribosylglycinamide synthetase, C domain KHU1_0447 PF11127 Protein of unknown function (DUF2892) KHU1_0448 PF01979 Amidohydrolase family KHU1_0448 PF13382 Adenine deaminase C-terminal domain KHU1_0449 PF11258 Protein of unknown function (DUF3048) N-terminal domain KHU1_0449 PF17479 Protein of unknown function (DUF3048) C-terminal domain KHU1_0450 PF01371 Trp repressor protein KHU1_0451 PF01645 Conserved region in glutamate synthase KHU1_0453 PF01884 PcrB family KHU1_0454 PF13361 UvrD-like helicase C-terminal domain KHU1_0454 PF00580 UvrD/REP helicase N-terminal domain KHU1_0455 PF03120 NAD-dependent DNA ligase OB-fold domain KHU1_0455 PF00533 BRCA1 C Terminus (BRCT) domain KHU1_0455 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KHU1_0455 PF01653 NAD-dependent DNA ligase adenylation domain KHU1_0455 PF12826 Helix-hairpin-helix motif KHU1_0456 PF07537 CamS sex pheromone cAM373 precursor KHU1_0457 PF01636 Phosphotransferase enzyme family KHU1_0458 PF13276 HTH-like domain KHU1_0458 PF13333 Integrase core domain KHU1_0458 PF00665 Integrase core domain KHU1_0460 PF02308 MgtC family KHU1_0461 PF00474 Sodium:solute symporter family KHU1_0463 PF02686 Glu-tRNAGln amidotransferase C subunit KHU1_0464 PF01425 Amidase KHU1_0465 PF02637 GatB domain KHU1_0465 PF02934 GatB/GatE catalytic domain KHU1_0466 PF00440 Bacterial regulatory proteins, tetR family KHU1_0467 PF00873 AcrB/AcrD/AcrF family KHU1_0468 PF00781 Diacylglycerol kinase catalytic domain KHU1_0469 PF01938 TRAM domain KHU1_0469 PF05958 tRNA (Uracil-5-)-methyltransferase KHU1_0471 PF00005 ABC transporter KHU1_0473 PF04634 Protein of unknown function, DUF600 KHU1_0474 PF04634 Protein of unknown function, DUF600 KHU1_0475 PF04634 Protein of unknown function, DUF600 KHU1_0476 PF04634 Protein of unknown function, DUF600 KHU1_0477 PF04740 LXG domain of WXG superfamily KHU1_0479 PF04634 Protein of unknown function, DUF600 KHU1_0480 PF04634 Protein of unknown function, DUF600 KHU1_0481 PF04740 LXG domain of WXG superfamily KHU1_0482 PF01709 Transcriptional regulator KHU1_0484 PF04439 Streptomycin adenylyltransferase KHU1_0485 PF11007 Spore coat associated protein JA (CotJA) KHU1_0486 PF12652 CotJB protein KHU1_0487 PF05067 Manganese containing catalase KHU1_0488 PF00583 Acetyltransferase (GNAT) family KHU1_0490 PF04239 Protein of unknown function (DUF421) KHU1_0491 PF03992 Antibiotic biosynthesis monooxygenase KHU1_0492 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHU1_0493 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain KHU1_0493 PF01740 STAS domain KHU1_0495 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_0496 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_0497 PF12857 TOBE-like domain KHU1_0497 PF17850 CysA C-terminal regulatory domain KHU1_0497 PF00005 ABC transporter KHU1_0498 PF10055 Uncharacterized small protein (DUF2292) KHU1_0499 PF01687 Riboflavin kinase KHU1_0500 PF01027 Inhibitor of apoptosis-promoting Bax1 KHU1_0501 PF01047 MarR family KHU1_0502 PF01494 FAD binding domain KHU1_0503 PF13039 Protein of unknown function (DUF3900) KHU1_0503 PF13037 Domain of unknown function (DUF3898) KHU1_0504 PF00067 Cytochrome P450 KHU1_0504 PF00175 Oxidoreductase NAD-binding domain KHU1_0504 PF00258 Flavodoxin KHU1_0504 PF00667 FAD binding domain KHU1_0505 PF00884 Sulfatase KHU1_0506 PF00483 Nucleotidyl transferase KHU1_0507 PF16363 GDP-mannose 4,6 dehydratase KHU1_0508 PF03407 Nucleotide-diphospho-sugar transferase KHU1_0509 PF00535 Glycosyl transferase family 2 KHU1_0510 PF03407 Nucleotide-diphospho-sugar transferase KHU1_0511 PF07690 Major Facilitator Superfamily KHU1_0512 PF13520 Amino acid permease KHU1_0513 PF00171 Aldehyde dehydrogenase family KHU1_0514 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHU1_0516 PF13181 Tetratricopeptide repeat KHU1_0516 PF00535 Glycosyl transferase family 2 KHU1_0517 PF12848 ABC transporter KHU1_0517 PF00005 ABC transporter KHU1_0517 PF16326 ABC transporter C-terminal domain KHU1_0518 PF13411 MerR HTH family regulatory protein KHU1_0519 PF07690 Major Facilitator Superfamily KHU1_0520 PF12848 ABC transporter KHU1_0520 PF00005 ABC transporter KHU1_0521 PF00271 Helicase conserved C-terminal domain KHU1_0521 PF00270 DEAD/DEAH box helicase KHU1_0522 PF00583 Acetyltransferase (GNAT) family KHU1_0523 PF16884 N-terminal domain of oxidoreductase KHU1_0523 PF00107 Zinc-binding dehydrogenase KHU1_0524 PF11486 Protein of unknown function (DUF3212) KHU1_0525 PF11181 Heat induced stress protein YflT KHU1_0526 PF00544 Pectate lyase KHU1_0527 PF00939 Sodium:sulfate symporter transmembrane region KHU1_0532 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KHU1_0532 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_0533 PF12431 Transcriptional regulator KHU1_0533 PF08279 HTH domain KHU1_0533 PF00072 Response regulator receiver domain KHU1_0534 PF03401 Tripartite tricarboxylate transporter family receptor KHU1_0535 PF03600 Citrate transporter KHU1_0536 PF00753 Metallo-beta-lactamase superfamily KHU1_0537 PF02898 Nitric oxide synthase, oxygenase domain KHU1_0538 PF00708 Acylphosphatase KHU1_0539 PF03473 MOSC domain KHU1_0539 PF03475 3-alpha domain KHU1_0540 PF11588 Protein of unknown function (DUF3243) KHU1_0541 PF00557 Metallopeptidase family M24 KHU1_0542 PF02378 Phosphotransferase system, EIIC KHU1_0542 PF00367 phosphotransferase system, EIIB KHU1_0543 PF10787 Uncharacterised protein from bacillus cereus group KHU1_0544 PF00884 Sulfatase KHU1_0545 PF09350 Domain of unknown function (DUF1992) KHU1_0546 PF00011 Hsp20/alpha crystallin family KHU1_0547 PF10676 Spore germination protein gerPA/gerPF KHU1_0548 PF10676 Spore germination protein gerPA/gerPF KHU1_0549 PF02378 Phosphotransferase system, EIIC KHU1_0549 PF00367 phosphotransferase system, EIIB KHU1_0550 PF16657 Maltogenic Amylase, C-terminal domain KHU1_0550 PF00128 Alpha amylase, catalytic domain KHU1_0551 PF00392 Bacterial regulatory proteins, gntR family KHU1_0551 PF07702 UTRA domain KHU1_0552 PF00881 Nitroreductase family KHU1_0555 PF02872 5'-nucleotidase, C-terminal domain KHU1_0555 PF00149 Calcineurin-like phosphoesterase KHU1_0556 PF01965 DJ-1/PfpI family KHU1_0557 PF00356 Bacterial regulatory proteins, lacI family KHU1_0558 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KHU1_0558 PF08501 Shikimate dehydrogenase substrate binding domain KHU1_0559 PF01487 Type I 3-dehydroquinase KHU1_0560 PF07690 Major Facilitator Superfamily KHU1_0561 PF06569 Protein of unknown function (DUF1128) KHU1_0562 PF01451 Low molecular weight phosphotyrosine protein phosphatase KHU1_0564 PF03631 Virulence factor BrkB KHU1_0565 PF07690 Major Facilitator Superfamily KHU1_0566 PF01699 Sodium/calcium exchanger protein KHU1_0567 PF14167 YfkD-like protein KHU1_0568 PF00924 Mechanosensitive ion channel KHU1_0569 PF04055 Radical SAM superfamily KHU1_0569 PF08756 YfkB-like domain KHU1_0571 PF01522 Polysaccharide deacetylase KHU1_0572 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KHU1_0572 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KHU1_0574 PF01544 CorA-like Mg2+ transporter protein KHU1_0575 PF00730 HhH-GPD superfamily base excision DNA repair protein KHU1_0576 PF01938 TRAM domain KHU1_0576 PF05958 tRNA (Uracil-5-)-methyltransferase KHU1_0577 PF14118 YfzA-like protein KHU1_0578 PF01207 Dihydrouridine synthase (Dus) KHU1_0580 PF00676 Dehydrogenase E1 component KHU1_0581 PF02779 Transketolase, pyrimidine binding domain KHU1_0581 PF02780 Transketolase, C-terminal domain KHU1_0582 PF00364 Biotin-requiring enzyme KHU1_0582 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KHU1_0582 PF02817 e3 binding domain KHU1_0583 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHU1_0583 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KHU1_0584 PF00158 Sigma-54 interaction domain KHU1_0584 PF01590 GAF domain KHU1_0584 PF02954 Bacterial regulatory protein, Fis family KHU1_0585 PF08141 Small acid-soluble spore protein H family KHU1_0586 PF11975 Family 4 glycosyl hydrolase C-terminal domain KHU1_0586 PF02056 Family 4 glycosyl hydrolase KHU1_0587 PF01380 SIS domain KHU1_0587 PF01418 Helix-turn-helix domain, rpiR family KHU1_0588 PF02378 Phosphotransferase system, EIIC KHU1_0588 PF00367 phosphotransferase system, EIIB KHU1_0589 PF00005 ABC transporter KHU1_0589 PF00664 ABC transporter transmembrane region KHU1_0590 PF00664 ABC transporter transmembrane region KHU1_0590 PF00005 ABC transporter KHU1_0591 PF07681 DoxX KHU1_0592 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHU1_0593 PF01040 UbiA prenyltransferase family KHU1_0594 PF10400 Virulence activator alpha C-term KHU1_0594 PF03551 Transcriptional regulator PadR-like family KHU1_0595 PF02525 Flavodoxin-like fold KHU1_0596 PF01757 Acyltransferase family KHU1_0597 PF00391 PEP-utilising enzyme, mobile domain KHU1_0597 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KHU1_0598 PF01337 Barstar (barnase inhibitor) KHU1_0599 PF12867 DinB superfamily KHU1_0600 PF07690 Major Facilitator Superfamily KHU1_0601 PF01047 MarR family KHU1_0602 PF09924 Uncharacterised conserved protein (DUF2156) KHU1_0602 PF03706 Lysylphosphatidylglycerol synthase TM region KHU1_0603 PF02567 Phenazine biosynthesis-like protein KHU1_0604 PF00881 Nitroreductase family KHU1_0605 PF14151 YfhD-like protein KHU1_0606 PF08338 Domain of unknown function (DUF1731) KHU1_0606 PF01370 NAD dependent epimerase/dehydratase family KHU1_0607 PF02631 RecX family KHU1_0608 PF08838 Protein of unknown function (DUF1811) KHU1_0609 PF07690 Major Facilitator Superfamily KHU1_0610 PF10794 Protein of unknown function (DUF2606) KHU1_0611 PF00089 Trypsin KHU1_0612 PF08176 Small acid-soluble spore protein K family KHU1_0613 PF14043 WVELL protein KHU1_0614 PF08239 Bacterial SH3 domain KHU1_0615 PF13630 SdpI/YhfL protein family KHU1_0616 PF00561 alpha/beta hydrolase fold KHU1_0617 PF00535 Glycosyl transferase family 2 KHU1_0618 PF09586 Bacterial membrane protein YfhO KHU1_0619 PF04307 LexA-binding, inner membrane-associated putative hydrolase KHU1_0620 PF14815 NUDIX domain KHU1_0620 PF00730 HhH-GPD superfamily base excision DNA repair protein KHU1_0623 PF04259 Small, acid-soluble spore protein, gamma-type KHU1_0624 PF14182 YgaB-like protein KHU1_0625 PF04167 Protein of unknown function (DUF402) KHU1_0626 PF00005 ABC transporter KHU1_0626 PF00664 ABC transporter transmembrane region KHU1_0627 PF06081 Aromatic acid exporter family member 1 KHU1_0628 PF00202 Aminotransferase class-III KHU1_0629 PF00578 AhpC/TSA family KHU1_0630 PF01475 Ferric uptake regulator family KHU1_0631 PF11023 Zinc-ribbon containing domain KHU1_0632 PF18576 Helix-turn-helix domain KHU1_0632 PF14540 Nucleotidyltransferase-like KHU1_0633 PF03553 Na+/H+ antiporter family KHU1_0634 PF03575 Peptidase family S51 KHU1_0635 PF13667 ThiC-associated domain KHU1_0635 PF01964 Radical SAM ThiC family KHU1_0636 PF01565 FAD binding domain KHU1_0636 PF08031 Berberine and berberine like KHU1_0637 PF13040 Fur-regulated basic protein B KHU1_0638 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KHU1_0639 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_0640 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_0640 PF12911 N-terminal TM domain of oligopeptide transport permease C KHU1_0641 PF00005 ABC transporter KHU1_0641 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHU1_0642 PF00005 ABC transporter KHU1_0642 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHU1_0643 PF00199 Catalase KHU1_0643 PF06628 Catalase-related immune-responsive KHU1_0645 PF00005 ABC transporter KHU1_0646 PF09084 NMT1/THI5 like KHU1_0647 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_0648 PF00296 Luciferase-like monooxygenase KHU1_0649 PF00253 Ribosomal protein S14p/S29e KHU1_0651 PF01381 Helix-turn-helix KHU1_0653 PF08331 Domain of unknown function (DUF1730) KHU1_0654 PF12671 Putative amidase domain KHU1_0655 PF00588 SpoU rRNA Methylase family KHU1_0656 PF13171 Protein of unknown function (DUF4004) KHU1_0657 PF04519 Polymer-forming cytoskeletal KHU1_0659 PF08298 PrkA AAA domain KHU1_0659 PF06798 PrkA serine protein kinase C-terminal domain KHU1_0660 PF04285 Protein of unknown function (DUF444) KHU1_0661 PF01047 MarR family KHU1_0663 PF07690 Major Facilitator Superfamily KHU1_0664 PF03358 NADPH-dependent FMN reductase KHU1_0667 PF00392 Bacterial regulatory proteins, gntR family KHU1_0668 PF00005 ABC transporter KHU1_0669 PF00005 ABC transporter KHU1_0670 PF12679 ABC-2 family transporter protein KHU1_0671 PF00313 'Cold-shock' DNA-binding domain KHU1_0672 PF03180 NLPA lipoprotein KHU1_0673 PF00990 Diguanylate cyclase, GGDEF domain KHU1_0673 PF07694 5TMR of 5TMR-LYT KHU1_0674 PF00375 Sodium:dicarboxylate symporter family KHU1_0676 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KHU1_0678 PF07875 Coat F domain KHU1_0679 PF00565 Staphylococcal nuclease homologue KHU1_0679 PF00149 Calcineurin-like phosphoesterase KHU1_0679 PF00746 LPXTG cell wall anchor motif KHU1_0679 PF02872 5'-nucleotidase, C-terminal domain KHU1_0680 PF04203 Sortase domain KHU1_0681 PF01479 S4 domain KHU1_0681 PF00849 RNA pseudouridylate synthase KHU1_0682 PF17326 Family of unknown function (DUF5365) KHU1_0683 PF00571 CBS domain KHU1_0684 PF13419 Haloacid dehalogenase-like hydrolase KHU1_0685 PF00583 Acetyltransferase (GNAT) family KHU1_0685 PF00795 Carbon-nitrogen hydrolase KHU1_0686 PF00202 Aminotransferase class-III KHU1_0687 PF04309 Glycerol-3-phosphate responsive antiterminator KHU1_0688 PF00230 Major intrinsic protein KHU1_0689 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KHU1_0689 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KHU1_0690 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KHU1_0690 PF01266 FAD dependent oxidoreductase KHU1_0691 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KHU1_0691 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KHU1_0691 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KHU1_0691 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KHU1_0692 PF13185 GAF domain KHU1_0692 PF07730 Histidine kinase KHU1_0693 PF00072 Response regulator receiver domain KHU1_0693 PF00196 Bacterial regulatory proteins, luxR family KHU1_0694 PF03358 NADPH-dependent FMN reductase KHU1_0695 PF14148 YhdB-like protein KHU1_0696 PF13028 Protein of unknown function (DUF3889) KHU1_0697 PF00877 NlpC/P60 family KHU1_0697 PF01476 LysM domain KHU1_0698 PF02082 Transcriptional regulator KHU1_0699 PF05552 Conserved TM helix KHU1_0701 PF00245 Alkaline phosphatase KHU1_0702 PF00877 NlpC/P60 family KHU1_0702 PF01476 LysM domain KHU1_0703 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_0703 PF03466 LysR substrate binding domain KHU1_0704 PF00285 Citrate synthase, C-terminal domain KHU1_0706 PF13520 Amino acid permease KHU1_0707 PF00209 Sodium:neurotransmitter symporter family KHU1_0708 PF17453 Sigma-M inhibitor KHU1_0709 PF13800 Sigma factor regulator N-terminal KHU1_0709 PF13791 Sigma factor regulator C-terminal KHU1_0710 PF08281 Sigma-70, region 4 KHU1_0710 PF04542 Sigma-70 region 2 KHU1_0711 PF01553 Acyltransferase KHU1_0712 PF00571 CBS domain KHU1_0712 PF01595 Cyclin M transmembrane N-terminal domain KHU1_0712 PF03471 Transporter associated domain KHU1_0713 PF13411 MerR HTH family regulatory protein KHU1_0715 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_0715 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_0716 PF01595 Cyclin M transmembrane N-terminal domain KHU1_0716 PF03471 Transporter associated domain KHU1_0716 PF00571 CBS domain KHU1_0717 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KHU1_0718 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KHU1_0719 PF03009 Glycerophosphoryl diester phosphodiesterase family KHU1_0720 PF00924 Mechanosensitive ion channel KHU1_0722 PF13333 Integrase core domain KHU1_0722 PF00665 Integrase core domain KHU1_0722 PF13276 HTH-like domain KHU1_0723 PF02146 Sir2 family KHU1_0724 PF01522 Polysaccharide deacetylase KHU1_0725 PF01063 Amino-transferase class IV KHU1_0726 PF00440 Bacterial regulatory proteins, tetR family KHU1_0726 PF13977 BetI-type transcriptional repressor, C-terminal KHU1_0728 PF00582 Universal stress protein family KHU1_0729 PF00005 ABC transporter KHU1_0729 PF00664 ABC transporter transmembrane region KHU1_0730 PF00005 ABC transporter KHU1_0730 PF00664 ABC transporter transmembrane region KHU1_0731 PF13460 NAD(P)H-binding KHU1_0732 PF00269 Small, acid-soluble spore proteins, alpha/beta type KHU1_0734 PF17277 Family of unknown function (DUF5342) KHU1_0735 PF14398 YheC/D like ATP-grasp KHU1_0736 PF14398 YheC/D like ATP-grasp KHU1_0737 PF04286 Protein of unknown function (DUF445) KHU1_0738 PF06133 Control of competence regulator ComK, YlbF/YmcA KHU1_0739 PF08713 DNA alkylation repair enzyme KHU1_0741 PF04055 Radical SAM superfamily KHU1_0742 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KHU1_0743 PF00999 Sodium/hydrogen exchanger family KHU1_0744 PF02080 TrkA-C domain KHU1_0746 PF00378 Enoyl-CoA hydratase/isomerase KHU1_0747 PF14120 YhzD-like protein KHU1_0748 PF00005 ABC transporter KHU1_0748 PF13732 Domain of unknown function (DUF4162) KHU1_0750 PF00149 Calcineurin-like phosphoesterase KHU1_0751 PF13514 AAA domain KHU1_0752 PF01966 HD domain KHU1_0753 PF14147 Sporulation protein YhaL KHU1_0757 PF11667 Putative zincin peptidase KHU1_0759 PF08963 Protein of unknown function (DUF1878) KHU1_0760 PF01047 MarR family KHU1_0761 PF12732 YtxH-like protein KHU1_0763 PF17099 Tryptophan transporter TrpP KHU1_0764 PF00266 Aminotransferase class-V KHU1_0765 PF01230 HIT domain KHU1_0766 PF00005 ABC transporter KHU1_0767 PF05975 Bacterial ABC transporter protein EcsB KHU1_0768 PF12787 EcsC protein family KHU1_0769 PF07687 Peptidase dimerisation domain KHU1_0769 PF01546 Peptidase family M20/M25/M40 KHU1_0771 PF03992 Antibiotic biosynthesis monooxygenase KHU1_0772 PF00905 Penicillin binding protein transpeptidase domain KHU1_0772 PF00912 Transglycosylase KHU1_0773 PF01208 Uroporphyrinogen decarboxylase (URO-D) KHU1_0776 PF00440 Bacterial regulatory proteins, tetR family KHU1_0776 PF17932 Tetracyclin repressor-like, C-terminal domain KHU1_0778 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KHU1_0778 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KHU1_0780 PF05343 M42 glutamyl aminopeptidase KHU1_0781 PF00375 Sodium:dicarboxylate symporter family KHU1_0782 PF12706 Beta-lactamase superfamily domain KHU1_0783 PF10437 Bacterial lipoate protein ligase C-terminus KHU1_0783 PF03099 Biotin/lipoate A/B protein ligase family KHU1_0784 PF13460 NAD(P)H-binding KHU1_0785 PF13193 AMP-binding enzyme C-terminal domain KHU1_0785 PF00501 AMP-binding enzyme KHU1_0787 PF16491 CAAX prenyl protease N-terminal, five membrane helices KHU1_0787 PF01435 Peptidase family M48 KHU1_0788 PF05922 Peptidase inhibitor I9 KHU1_0788 PF00082 Subtilase family KHU1_0790 PF01497 Periplasmic binding protein KHU1_0791 PF00300 Histidine phosphatase superfamily (branch 1) KHU1_0792 PF00108 Thiolase, N-terminal domain KHU1_0792 PF02803 Thiolase, C-terminal domain KHU1_0793 PF13193 AMP-binding enzyme C-terminal domain KHU1_0793 PF00501 AMP-binding enzyme KHU1_0794 PF02632 BioY family KHU1_0795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHU1_0796 PF00355 Rieske [2Fe-2S] domain KHU1_0796 PF01266 FAD dependent oxidoreductase KHU1_0798 PF08858 IDEAL domain KHU1_0799 PF06338 ComK protein KHU1_0801 PF08818 Domain of unknown function (DU1801) KHU1_0803 PF15493 Domain of unknown function, YrpD KHU1_0804 PF05901 Excalibur calcium-binding domain KHU1_0805 PF01906 Putative heavy-metal-binding KHU1_0806 PF00474 Sodium:solute symporter family KHU1_0807 PF11755 Protein of unknown function (DUF3311) KHU1_0809 PF09335 SNARE associated Golgi protein KHU1_0810 PF10502 Signal peptidase, peptidase S26 KHU1_0811 PF01494 FAD binding domain KHU1_0812 PF01047 MarR family KHU1_0813 PF05145 Transition state regulatory protein AbrB KHU1_0814 PF07690 Major Facilitator Superfamily KHU1_0815 PF00440 Bacterial regulatory proteins, tetR family KHU1_0815 PF08361 MAATS-type transcriptional repressor, C-terminal region KHU1_0816 PF02915 Rubrerythrin KHU1_0817 PF04239 Protein of unknown function (DUF421) KHU1_0818 PF13361 UvrD-like helicase C-terminal domain KHU1_0818 PF12705 PD-(D/E)XK nuclease superfamily KHU1_0819 PF12705 PD-(D/E)XK nuclease superfamily KHU1_0819 PF00580 UvrD/REP helicase N-terminal domain KHU1_0819 PF13361 UvrD-like helicase C-terminal domain KHU1_0820 PF00149 Calcineurin-like phosphoesterase KHU1_0820 PF12320 Type 5 capsule protein repressor C-terminal domain KHU1_0821 PF13476 AAA domain KHU1_0823 PF10676 Spore germination protein gerPA/gerPF KHU1_0824 PF10970 Spore germination protein GerPE KHU1_0826 PF10737 Spore germination protein GerPC KHU1_0827 PF10803 Spore germination GerPB KHU1_0828 PF10676 Spore germination protein gerPA/gerPF KHU1_0829 PF09388 Spo0E like sporulation regulatory protein KHU1_0830 PF01557 Fumarylacetoacetate (FAA) hydrolase family KHU1_0831 PF07457 Protein of unknown function (DUF1516) KHU1_0833 PF10949 Protein of unknown function (DUF2777) KHU1_0834 PF00733 Asparagine synthase KHU1_0834 PF13537 Glutamine amidotransferase domain KHU1_0836 PF01554 MatE KHU1_0837 PF12833 Helix-turn-helix domain KHU1_0837 PF02311 AraC-like ligand binding domain KHU1_0838 PF05163 DinB family KHU1_0839 PF01810 LysE type translocator KHU1_0840 PF00155 Aminotransferase class I and II KHU1_0840 PF00392 Bacterial regulatory proteins, gntR family KHU1_0841 PF13599 Pentapeptide repeats (9 copies) KHU1_0842 PF13673 Acetyltransferase (GNAT) domain KHU1_0843 PF02574 Homocysteine S-methyltransferase KHU1_0843 PF02219 Methylenetetrahydrofolate reductase KHU1_0844 PF04461 Protein of unknown function (DUF520) KHU1_0845 PF13509 S1 domain KHU1_0845 PF17783 CvfB-like winged helix domain KHU1_0847 PF00672 HAMP domain KHU1_0847 PF12729 Four helix bundle sensory module for signal transduction KHU1_0847 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHU1_0848 PF00067 Cytochrome P450 KHU1_0849 PF02645 Uncharacterised protein, DegV family COG1307 KHU1_0850 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHU1_0850 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHU1_0851 PF12690 Intracellular proteinase inhibitor KHU1_0852 PF12758 Protein of unknown function (DUF3813) KHU1_0854 PF00326 Prolyl oligopeptidase family KHU1_0855 PF01883 Iron-sulfur cluster assembly protein KHU1_0856 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHU1_0857 PF01565 FAD binding domain KHU1_0858 PF07690 Major Facilitator Superfamily KHU1_0859 PF02774 Semialdehyde dehydrogenase, dimerisation domain KHU1_0859 PF01118 Semialdehyde dehydrogenase, NAD binding domain KHU1_0860 PF01960 ArgJ family KHU1_0861 PF00696 Amino acid kinase family KHU1_0862 PF00202 Aminotransferase class-III KHU1_0863 PF00117 Glutamine amidotransferase class-I KHU1_0863 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KHU1_0864 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KHU1_0864 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KHU1_0865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KHU1_0865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KHU1_0866 PF14168 YjzC-like protein KHU1_0867 PF11151 Protein of unknown function (DUF2929) KHU1_0871 PF02608 ABC transporter substrate-binding protein PnrA-like KHU1_0872 PF10815 ComZ KHU1_0874 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KHU1_0874 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KHU1_0875 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_0875 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_0876 PF10026 Predicted Zn-dependent protease (DUF2268) KHU1_0877 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHU1_0877 PF00005 ABC transporter KHU1_0878 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHU1_0878 PF00005 ABC transporter KHU1_0879 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KHU1_0880 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_0881 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_0881 PF12911 N-terminal TM domain of oligopeptide transport permease C KHU1_0882 PF12227 Protein of unknown function (DUF3603) KHU1_0883 PF00579 tRNA synthetases class I (W and Y) KHU1_0884 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KHU1_0885 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_0886 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_0886 PF12911 N-terminal TM domain of oligopeptide transport permease C KHU1_0887 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHU1_0887 PF00005 ABC transporter KHU1_0888 PF00005 ABC transporter KHU1_0888 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHU1_0890 PF13508 Acetyltransferase (GNAT) domain KHU1_0891 PF03960 ArsC family KHU1_0892 PF03741 Integral membrane protein TerC family KHU1_0893 PF05389 Negative regulator of genetic competence (MecA) KHU1_0894 PF06054 Competence protein CoiA-like family KHU1_0895 PF01432 Peptidase family M3 KHU1_0895 PF08439 Oligopeptidase F KHU1_0898 PF01152 Bacterial-like globin KHU1_0899 PF01464 Transglycosylase SLT domain KHU1_0900 PF01928 CYTH domain KHU1_0902 PF04607 Region found in RelA / SpoT proteins KHU1_0903 PF01513 ATP-NAD kinase KHU1_0904 PF00849 RNA pseudouridylate synthase KHU1_0905 PF00149 Calcineurin-like phosphoesterase KHU1_0906 PF02254 TrkA-N domain KHU1_0906 PF02080 TrkA-C domain KHU1_0906 PF00999 Sodium/hydrogen exchanger family KHU1_0907 PF03070 TENA/THI-4/PQQC family KHU1_0908 PF02581 Thiamine monophosphate synthase KHU1_0909 PF01266 FAD dependent oxidoreductase KHU1_0910 PF02597 ThiS family KHU1_0911 PF05690 Thiazole biosynthesis protein ThiG KHU1_0912 PF00899 ThiF family KHU1_0913 PF08543 Phosphomethylpyrimidine kinase KHU1_0915 PF14153 Spore coat protein CotO KHU1_0916 PF10612 Spore coat protein Z KHU1_0917 PF10612 Spore coat protein Z KHU1_0918 PF07552 Spore Coat Protein X and V domain KHU1_0920 PF07552 Spore Coat Protein X and V domain KHU1_0921 PF07098 Protein of unknown function (DUF1360) KHU1_0923 PF14069 Stage VI sporulation protein F KHU1_0924 PF00580 UvrD/REP helicase N-terminal domain KHU1_0924 PF13361 UvrD-like helicase C-terminal domain KHU1_0926 PF00753 Metallo-beta-lactamase superfamily KHU1_0928 PF00005 ABC transporter KHU1_0930 PF13673 Acetyltransferase (GNAT) domain KHU1_0932 PF00756 Putative esterase KHU1_0933 PF01053 Cys/Met metabolism PLP-dependent enzyme KHU1_0934 PF01053 Cys/Met metabolism PLP-dependent enzyme KHU1_0935 PF14659 Phage integrase, N-terminal SAM-like domain KHU1_0935 PF00589 Phage integrase family KHU1_0936 PF06114 IrrE N-terminal-like domain KHU1_0942 PF01381 Helix-turn-helix KHU1_0943 PF17448 Uncharacterized YqaH-like KHU1_0944 PF09466 Hypothetical protein Yqai KHU1_0949 PF07261 Replication initiation and membrane attachment KHU1_0950 PF01695 IstB-like ATP binding protein KHU1_0951 PF05866 Endodeoxyribonuclease RusA KHU1_0952 PF17356 Phage-like element PBSX protein XtrA KHU1_0955 PF00145 C-5 cytosine-specific DNA methylase KHU1_0958 PF08281 Sigma-70, region 4 KHU1_0964 PF10668 Phage terminase small subunit KHU1_0979 PF01464 Transglycosylase SLT domain KHU1_0989 PF09693 Phage uncharacterised protein (Phage_XkdX) KHU1_0990 PF10779 Haemolysin XhlA KHU1_0991 PF04688 SPP1 phage holin KHU1_0992 PF01471 Putative peptidoglycan binding domain KHU1_0992 PF01510 N-acetylmuramoyl-L-alanine amidase KHU1_0996 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH KHU1_0996 PF04740 LXG domain of WXG superfamily KHU1_1001 PF04740 LXG domain of WXG superfamily KHU1_1001 PF15652 HNH/Endo VII superfamily toxin with a SHH signature KHU1_1002 PF04740 LXG domain of WXG superfamily KHU1_1002 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH KHU1_1007 PF09639 YjcQ protein KHU1_1010 PF03992 Antibiotic biosynthesis monooxygenase KHU1_1011 PF07690 Major Facilitator Superfamily KHU1_1012 PF01047 MarR family KHU1_1013 PF07745 Glycosyl hydrolase family 53 KHU1_1014 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KHU1_1014 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KHU1_1015 PF16363 GDP-mannose 4,6 dehydratase KHU1_1016 PF00288 GHMP kinases N terminal domain KHU1_1016 PF08544 GHMP kinases C terminal KHU1_1016 PF10509 Galactokinase galactose-binding signature KHU1_1017 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KHU1_1017 PF02378 Phosphotransferase system, EIIC KHU1_1018 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KHU1_1019 PF00232 Glycosyl hydrolase family 1 KHU1_1020 PF00455 DeoR C terminal sensor domain KHU1_1020 PF08220 DeoR-like helix-turn-helix domain KHU1_1025 PF02308 MgtC family KHU1_1027 PF14070 Putative motility protein KHU1_1028 PF10990 Protein of unknown function (DUF2809) KHU1_1029 PF14172 Domain of unknown function (DUF4309) KHU1_1030 PF00384 Molybdopterin oxidoreductase KHU1_1030 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KHU1_1030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KHU1_1030 PF12838 4Fe-4S dicluster domain KHU1_1030 PF01568 Molydopterin dinucleotide binding domain KHU1_1031 PF07849 Protein of unknown function (DUF1641) KHU1_1032 PF00067 Cytochrome P450 KHU1_1033 PF04101 Glycosyltransferase family 28 C-terminal domain KHU1_1035 PF02602 Uroporphyrinogen-III synthase HemD KHU1_1036 PF03649 Uncharacterised protein family (UPF0014) KHU1_1037 PF00005 ABC transporter KHU1_1038 PF13536 Putative multidrug resistance efflux transporter KHU1_1040 PF07849 Protein of unknown function (DUF1641) KHU1_1041 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHU1_1042 PF02614 Glucuronate isomerase KHU1_1044 PF00356 Bacterial regulatory proteins, lacI family KHU1_1045 PF01232 Mannitol dehydrogenase Rossmann domain KHU1_1045 PF08125 Mannitol dehydrogenase C-terminal domain KHU1_1046 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus KHU1_1046 PF08666 SAF domain KHU1_1047 PF01925 Sulfite exporter TauE/SafE KHU1_1048 PF05163 DinB family KHU1_1049 PF18801 response regulator aspartate phosphatase H, N terminal KHU1_1050 PF01471 Putative peptidoglycan binding domain KHU1_1050 PF01476 LysM domain KHU1_1050 PF01510 N-acetylmuramoyl-L-alanine amidase KHU1_1051 PF08000 Bacterial PH domain KHU1_1052 PF05908 Poly-gamma-glutamate hydrolase KHU1_1053 PF06114 IrrE N-terminal-like domain KHU1_1054 PF01381 Helix-turn-helix KHU1_1057 PF01695 IstB-like ATP binding protein KHU1_1059 PF17356 Phage-like element PBSX protein XtrA KHU1_1060 PF08281 Sigma-70, region 4 KHU1_1061 PF10668 Phage terminase small subunit KHU1_1061 PF03592 Terminase small subunit KHU1_1062 PF17288 Terminase RNAseH like domain KHU1_1062 PF04466 Phage terminase large subunit KHU1_1063 PF04860 Phage portal protein KHU1_1064 PF14550 Putative phage serine protease XkdF KHU1_1065 PF05065 Phage capsid family KHU1_1066 PF11436 Protein of unknown function (DUF3199) KHU1_1067 PF12206 Domain of unknown function (DUF3599) KHU1_1068 PF04883 Bacteriophage HK97-gp10, putative tail-component KHU1_1071 PF17481 Phage tail sheath protein beta-sandwich domain KHU1_1071 PF17482 Phage tail sheath C-terminal domain KHU1_1071 PF04984 Phage tail sheath protein subtilisin-like domain KHU1_1072 PF09393 Phage tail tube protein KHU1_1073 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC KHU1_1074 PF01464 Transglycosylase SLT domain KHU1_1074 PF01464 Transglycosylase SLT domain KHU1_1074 PF01464 Transglycosylase SLT domain KHU1_1075 PF01476 LysM domain KHU1_1077 PF10844 Protein of unknown function (DUF2577) KHU1_1078 PF10934 Protein of unknown function (DUF2634) KHU1_1079 PF04865 Baseplate J-like protein KHU1_1080 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) KHU1_1084 PF09693 Phage uncharacterised protein (Phage_XkdX) KHU1_1086 PF10779 Haemolysin XhlA KHU1_1087 PF04688 SPP1 phage holin KHU1_1088 PF01476 LysM domain KHU1_1088 PF01471 Putative peptidoglycan binding domain KHU1_1088 PF01510 N-acetylmuramoyl-L-alanine amidase KHU1_1089 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system KHU1_1090 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KHU1_1091 PF01384 Phosphate transporter family KHU1_1092 PF01865 Protein of unknown function DUF47 KHU1_1093 PF13520 Amino acid permease KHU1_1094 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHU1_1095 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase KHU1_1096 PF00535 Glycosyl transferase family 2 KHU1_1097 PF13180 PDZ domain KHU1_1098 PF07690 Major Facilitator Superfamily KHU1_1099 PF04951 D-aminopeptidase KHU1_1100 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_1101 PF12911 N-terminal TM domain of oligopeptide transport permease C KHU1_1101 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_1102 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHU1_1102 PF00005 ABC transporter KHU1_1103 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KHU1_1104 PF17676 LD-carboxypeptidase C-terminal domain KHU1_1104 PF02016 LD-carboxypeptidase N-terminal domain KHU1_1105 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KHU1_1105 PF13378 Enolase C-terminal domain-like KHU1_1106 PF00877 NlpC/P60 family KHU1_1107 PF00005 ABC transporter KHU1_1107 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHU1_1108 PF10282 Lactonase, 7-bladed beta-propeller KHU1_1110 PF03061 Thioesterase superfamily KHU1_1111 PF13302 Acetyltransferase (GNAT) domain KHU1_1112 PF00893 Small Multidrug Resistance protein KHU1_1113 PF00893 Small Multidrug Resistance protein KHU1_1114 PF00551 Formyl transferase KHU1_1114 PF01842 ACT domain KHU1_1115 PF00696 Amino acid kinase family KHU1_1115 PF01472 PUA domain KHU1_1116 PF00171 Aldehyde dehydrogenase family KHU1_1117 PF02566 OsmC-like protein KHU1_1118 PF01047 MarR family KHU1_1119 PF02566 OsmC-like protein KHU1_1122 PF13181 Tetratricopeptide repeat KHU1_1122 PF00535 Glycosyl transferase family 2 KHU1_1124 PF12832 MFS_1 like family KHU1_1125 PF00027 Cyclic nucleotide-binding domain KHU1_1126 PF01717 Cobalamin-independent synthase, Catalytic domain KHU1_1126 PF08267 Cobalamin-independent synthase, N-terminal domain KHU1_1127 PF00082 Subtilase family KHU1_1128 PF01740 STAS domain KHU1_1129 PF02361 Cobalt transport protein KHU1_1130 PF00005 ABC transporter KHU1_1131 PF09819 ABC-type cobalt transport system, permease component KHU1_1133 PF01476 LysM domain KHU1_1133 PF00704 Glycosyl hydrolases family 18 KHU1_1134 PF00571 CBS domain KHU1_1134 PF01769 Divalent cation transporter KHU1_1134 PF03448 MgtE intracellular N domain KHU1_1135 PF13411 MerR HTH family regulatory protein KHU1_1137 PF01047 MarR family KHU1_1139 PF01068 ATP dependent DNA ligase domain KHU1_1140 PF02735 Ku70/Ku80 beta-barrel domain KHU1_1141 PF09335 SNARE associated Golgi protein KHU1_1142 PF03741 Integral membrane protein TerC family KHU1_1143 PF04542 Sigma-70 region 2 KHU1_1144 PF12791 Anti-sigma factor N-terminus KHU1_1145 PF00269 Small, acid-soluble spore proteins, alpha/beta type KHU1_1146 PF08876 Domain of unknown function (DUF1836) KHU1_1147 PF01435 Peptidase family M48 KHU1_1148 PF02386 Cation transport protein KHU1_1149 PF04239 Protein of unknown function (DUF421) KHU1_1150 PF01757 Acyltransferase family KHU1_1151 PF13188 PAS domain KHU1_1151 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_1151 PF00989 PAS fold KHU1_1151 PF13426 PAS domain KHU1_1151 PF00512 His Kinase A (phospho-acceptor) domain KHU1_1152 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KHU1_1152 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KHU1_1153 PF01008 Initiation factor 2 subunit family KHU1_1154 PF01636 Phosphotransferase enzyme family KHU1_1155 PF00795 Carbon-nitrogen hydrolase KHU1_1156 PF00155 Aminotransferase class I and II KHU1_1157 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KHU1_1157 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KHU1_1159 PF00596 Class II Aldolase and Adducin N-terminal domain KHU1_1160 PF03079 ARD/ARD' family KHU1_1161 PF09388 Spo0E like sporulation regulatory protein KHU1_1163 PF01047 MarR family KHU1_1164 PF00691 OmpA family KHU1_1164 PF13677 Membrane MotB of proton-channel complex MotA/MotB KHU1_1165 PF01618 MotA/TolQ/ExbB proton channel family KHU1_1166 PF10431 C-terminal, D2-small domain, of ClpB protein KHU1_1166 PF17871 AAA lid domain KHU1_1166 PF07724 AAA domain (Cdc48 subfamily) KHU1_1166 PF00004 ATPase family associated with various cellular activities (AAA) KHU1_1170 PF06508 Queuosine biosynthesis protein QueC KHU1_1171 PF01242 6-pyruvoyl tetrahydropterin synthase KHU1_1172 PF04055 Radical SAM superfamily KHU1_1173 PF14489 QueF-like protein KHU1_1174 PF01638 HxlR-like helix-turn-helix KHU1_1176 PF14489 QueF-like protein KHU1_1177 PF01476 LysM domain KHU1_1178 PF01476 LysM domain KHU1_1179 PF00704 Glycosyl hydrolases family 18 KHU1_1180 PF11514 Protein of unknown function (DUF3219) KHU1_1181 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KHU1_1183 PF07486 Cell Wall Hydrolase KHU1_1184 PF01943 Polysaccharide biosynthesis protein KHU1_1185 PF00578 AhpC/TSA family KHU1_1187 PF01321 Creatinase/Prolidase N-terminal domain KHU1_1187 PF00557 Metallopeptidase family M24 KHU1_1188 PF00356 Bacterial regulatory proteins, lacI family KHU1_1188 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KHU1_1189 PF03123 CAT RNA binding domain KHU1_1189 PF00874 PRD domain KHU1_1190 PF02378 Phosphotransferase system, EIIC KHU1_1190 PF00367 phosphotransferase system, EIIB KHU1_1190 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KHU1_1191 PF00381 PTS HPr component phosphorylation site KHU1_1192 PF02896 PEP-utilising enzyme, TIM barrel domain KHU1_1192 PF05524 PEP-utilising enzyme, N-terminal KHU1_1192 PF00391 PEP-utilising enzyme, mobile domain KHU1_1193 PF11132 Transcriptional regulator protein (SplA) KHU1_1195 PF02743 Cache domain KHU1_1195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHU1_1195 PF00672 HAMP domain KHU1_1196 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KHU1_1196 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KHU1_1197 PF00188 Cysteine-rich secretory protein family KHU1_1198 PF03717 Penicillin-binding Protein dimerisation domain KHU1_1198 PF00905 Penicillin binding protein transpeptidase domain KHU1_1199 PF00512 His Kinase A (phospho-acceptor) domain KHU1_1199 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_1199 PF00989 PAS fold KHU1_1199 PF08447 PAS fold KHU1_1200 PF00155 Aminotransferase class I and II KHU1_1201 PF00072 Response regulator receiver domain KHU1_1201 PF01584 CheW-like domain KHU1_1202 PF14177 YkyB-like protein KHU1_1203 PF07690 Major Facilitator Superfamily KHU1_1204 PF01476 LysM domain KHU1_1204 PF03734 L,D-transpeptidase catalytic domain KHU1_1205 PF00149 Calcineurin-like phosphoesterase KHU1_1205 PF10518 TAT (twin-arginine translocation) pathway signal sequence KHU1_1208 PF10388 EAL-domain associated signalling protein domain KHU1_1208 PF00563 EAL domain KHU1_1209 PF08796 Protein of unknown function (DUF1797) KHU1_1210 PF04308 Ribonuclease H-like KHU1_1211 PF14156 Antirepressor AbbA KHU1_1213 PF03466 LysR substrate binding domain KHU1_1213 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_1214 PF00258 Flavodoxin KHU1_1216 PF00258 Flavodoxin KHU1_1217 PF00132 Bacterial transferase hexapeptide (six repeats) KHU1_1217 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KHU1_1217 PF14602 Hexapeptide repeat of succinyl-transferase KHU1_1218 PF07687 Peptidase dimerisation domain KHU1_1218 PF01546 Peptidase family M20/M25/M40 KHU1_1219 PF03698 Uncharacterised protein family (UPF0180) KHU1_1220 PF00924 Mechanosensitive ion channel KHU1_1221 PF00578 AhpC/TSA family KHU1_1224 PF12804 MobA-like NTP transferase domain KHU1_1225 PF00899 ThiF family KHU1_1226 PF00994 Probable molybdopterin binding domain KHU1_1226 PF03453 MoeA N-terminal region (domain I and II) KHU1_1226 PF03454 MoeA C-terminal region (domain IV) KHU1_1227 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KHU1_1228 PF02391 MoaE protein KHU1_1229 PF02597 ThiS family KHU1_1230 PF04893 Yip1 domain KHU1_1231 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KHU1_1232 PF00005 ABC transporter KHU1_1233 PF12704 MacB-like periplasmic core domain KHU1_1233 PF02687 FtsX-like permease family KHU1_1234 PF00455 DeoR C terminal sensor domain KHU1_1234 PF08220 DeoR-like helix-turn-helix domain KHU1_1235 PF00294 pfkB family carbohydrate kinase KHU1_1236 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KHU1_1236 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KHU1_1237 PF10502 Signal peptidase, peptidase S26 KHU1_1239 PF12848 ABC transporter KHU1_1239 PF00005 ABC transporter KHU1_1240 PF08546 Ketopantoate reductase PanE/ApbA C terminal KHU1_1240 PF02558 Ketopantoate reductase PanE/ApbA KHU1_1241 PF02073 Thermophilic metalloprotease (M29) KHU1_1244 PF18277 AbrB C-terminal domain KHU1_1244 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KHU1_1245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_1245 PF00989 PAS fold KHU1_1245 PF00512 His Kinase A (phospho-acceptor) domain KHU1_1246 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KHU1_1247 PF02080 TrkA-C domain KHU1_1247 PF02254 TrkA-N domain KHU1_1248 PF13382 Adenine deaminase C-terminal domain KHU1_1248 PF01979 Amidohydrolase family KHU1_1249 PF17770 Ribonuclease J C-terminal domain KHU1_1249 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KHU1_1249 PF00753 Metallo-beta-lactamase superfamily KHU1_1252 PF01327 Polypeptide deformylase KHU1_1254 PF10368 Putative cell-wall binding lipoprotein KHU1_1256 PF00698 Acyl transferase domain KHU1_1257 PF13193 AMP-binding enzyme C-terminal domain KHU1_1257 PF14765 Polyketide synthase dehydratase KHU1_1257 PF00501 AMP-binding enzyme KHU1_1257 PF08659 KR domain KHU1_1257 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1257 PF00550 Phosphopantetheine attachment site KHU1_1257 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1257 PF00668 Condensation domain KHU1_1257 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1258 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1258 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1258 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1258 PF08659 KR domain KHU1_1258 PF00550 Phosphopantetheine attachment site KHU1_1258 PF14765 Polyketide synthase dehydratase KHU1_1259 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1259 PF08659 KR domain KHU1_1259 PF14765 Polyketide synthase dehydratase KHU1_1259 PF13193 AMP-binding enzyme C-terminal domain KHU1_1259 PF00550 Phosphopantetheine attachment site KHU1_1259 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1259 PF00501 AMP-binding enzyme KHU1_1259 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1259 PF00668 Condensation domain KHU1_1260 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1260 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1260 PF14765 Polyketide synthase dehydratase KHU1_1260 PF00550 Phosphopantetheine attachment site KHU1_1260 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1260 PF08659 KR domain KHU1_1261 PF08659 KR domain KHU1_1261 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1261 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1261 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1261 PF00550 Phosphopantetheine attachment site KHU1_1261 PF14765 Polyketide synthase dehydratase KHU1_1262 PF08659 KR domain KHU1_1262 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1262 PF00550 Phosphopantetheine attachment site KHU1_1262 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1262 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1262 PF14765 Polyketide synthase dehydratase KHU1_1263 PF13193 AMP-binding enzyme C-terminal domain KHU1_1263 PF00668 Condensation domain KHU1_1263 PF14765 Polyketide synthase dehydratase KHU1_1263 PF08659 KR domain KHU1_1263 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1263 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1263 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1263 PF00501 AMP-binding enzyme KHU1_1263 PF00550 Phosphopantetheine attachment site KHU1_1264 PF11954 Domain of unknown function (DUF3471) KHU1_1264 PF00144 Beta-lactamase KHU1_1265 PF00676 Dehydrogenase E1 component KHU1_1266 PF02779 Transketolase, pyrimidine binding domain KHU1_1266 PF02780 Transketolase, C-terminal domain KHU1_1267 PF02817 e3 binding domain KHU1_1267 PF00364 Biotin-requiring enzyme KHU1_1267 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KHU1_1268 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KHU1_1268 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHU1_1271 PF01276 Orn/Lys/Arg decarboxylase, major domain KHU1_1271 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KHU1_1272 PF05256 Uncharacterised protein family (UPF0223) KHU1_1273 PF06335 Protein of unknown function (DUF1054) KHU1_1275 PF00459 Inositol monophosphatase family KHU1_1276 PF00583 Acetyltransferase (GNAT) family KHU1_1277 PF07504 Fungalysin/Thermolysin Propeptide Motif KHU1_1277 PF01447 Thermolysin metallopeptidase, catalytic domain KHU1_1277 PF03413 Peptidase propeptide and YPEB domain KHU1_1277 PF02868 Thermolysin metallopeptidase, alpha-helical domain KHU1_1279 PF17259 Family of unknown function (DUF5325) KHU1_1281 PF14036 YlaH-like protein KHU1_1282 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KHU1_1283 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KHU1_1284 PF13638 PIN domain KHU1_1284 PF02562 PhoH-like protein KHU1_1286 PF04960 Glutaminase KHU1_1287 PF07408 Protein of unknown function (DUF1507) KHU1_1288 PF01098 Cell cycle protein KHU1_1289 PF00289 Biotin carboxylase, N-terminal domain KHU1_1289 PF02785 Biotin carboxylase C-terminal domain KHU1_1289 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KHU1_1289 PF00682 HMGL-like KHU1_1289 PF02436 Conserved carboxylase domain KHU1_1289 PF00364 Biotin-requiring enzyme KHU1_1290 PF02628 Cytochrome oxidase assembly protein KHU1_1291 PF01040 UbiA prenyltransferase family KHU1_1292 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KHU1_1292 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KHU1_1292 PF00034 Cytochrome c KHU1_1293 PF00115 Cytochrome C and Quinol oxidase polypeptide I KHU1_1294 PF00510 Cytochrome c oxidase subunit III KHU1_1295 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KHU1_1296 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KHU1_1297 PF08868 YugN-like family KHU1_1298 PF00571 CBS domain KHU1_1299 PF14504 CAP-associated N-terminal KHU1_1299 PF00188 Cysteine-rich secretory protein family KHU1_1300 PF14071 Putative coat protein KHU1_1301 PF14003 YlbE-like protein KHU1_1302 PF06133 Control of competence regulator ComK, YlbF/YmcA KHU1_1303 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KHU1_1306 PF01467 Cytidylyltransferase-like KHU1_1307 PF07670 Nucleoside recognition KHU1_1308 PF01734 Patatin-like phospholipase KHU1_1309 PF13180 PDZ domain KHU1_1309 PF05362 Lon protease (S16) C-terminal proteolytic domain KHU1_1310 PF05636 HIGH Nucleotidyl Transferase KHU1_1311 PF02620 Large ribosomal RNA subunit accumulation protein YceD KHU1_1312 PF01783 Ribosomal L32p protein family KHU1_1314 PF00583 Acetyltransferase (GNAT) family KHU1_1315 PF02558 Ketopantoate reductase PanE/ApbA KHU1_1315 PF08546 Ketopantoate reductase PanE/ApbA C terminal KHU1_1316 PF10079 Bacillithiol biosynthesis BshC KHU1_1317 PF02381 MraZ protein, putative antitoxin-like KHU1_1318 PF01795 MraW methylase family KHU1_1321 PF00905 Penicillin binding protein transpeptidase domain KHU1_1321 PF03793 PASTA domain KHU1_1321 PF03717 Penicillin-binding Protein dimerisation domain KHU1_1322 PF08245 Mur ligase middle domain KHU1_1322 PF02875 Mur ligase family, glutamate ligase domain KHU1_1322 PF01225 Mur ligase family, catalytic domain KHU1_1323 PF00953 Glycosyl transferase family 4 KHU1_1323 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KHU1_1324 PF02875 Mur ligase family, glutamate ligase domain KHU1_1324 PF08245 Mur ligase middle domain KHU1_1325 PF01098 Cell cycle protein KHU1_1326 PF03033 Glycosyltransferase family 28 N-terminal domain KHU1_1326 PF04101 Glycosyltransferase family 28 C-terminal domain KHU1_1327 PF01565 FAD binding domain KHU1_1327 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KHU1_1328 PF08478 POTRA domain, FtsQ-type KHU1_1329 PF02491 SHS2 domain inserted in FTSA KHU1_1330 PF12327 FtsZ family, C-terminal domain KHU1_1330 PF00091 Tubulin/FtsZ family, GTPase domain KHU1_1331 PF05922 Peptidase inhibitor I9 KHU1_1331 PF00082 Subtilase family KHU1_1332 PF03419 Sporulation factor SpoIIGA KHU1_1333 PF04545 Sigma-70, region 4 KHU1_1333 PF04542 Sigma-70 region 2 KHU1_1334 PF04545 Sigma-70, region 4 KHU1_1334 PF04539 Sigma-70 region 3 KHU1_1334 PF04542 Sigma-70 region 2 KHU1_1335 PF00005 ABC transporter KHU1_1336 PF07687 Peptidase dimerisation domain KHU1_1336 PF01546 Peptidase family M20/M25/M40 KHU1_1337 PF05239 PRC-barrel domain KHU1_1339 PF01168 Alanine racemase, N-terminal domain KHU1_1340 PF04472 Cell division protein SepF KHU1_1341 PF02325 YGGT family KHU1_1342 PF17774 Putative RNA-binding domain in YlmH KHU1_1342 PF01479 S4 domain KHU1_1343 PF05103 DivIVA protein KHU1_1344 PF08264 Anticodon-binding domain of tRNA KHU1_1344 PF00133 tRNA synthetases class I (I, L, M and V) KHU1_1345 PF01258 Prokaryotic dksA/traR C4-type zinc finger KHU1_1346 PF01252 Signal peptidase (SPase) II KHU1_1347 PF00849 RNA pseudouridylate synthase KHU1_1347 PF01479 S4 domain KHU1_1348 PF00156 Phosphoribosyl transferase domain KHU1_1349 PF00860 Permease family KHU1_1350 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KHU1_1350 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KHU1_1351 PF01979 Amidohydrolase family KHU1_1352 PF00117 Glutamine amidotransferase class-I KHU1_1352 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KHU1_1353 PF02142 MGS-like domain KHU1_1353 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KHU1_1353 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KHU1_1354 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KHU1_1354 PF00175 Oxidoreductase NAD-binding domain KHU1_1355 PF01180 Dihydroorotate dehydrogenase KHU1_1356 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KHU1_1357 PF00156 Phosphoribosyl transferase domain KHU1_1358 PF01507 Phosphoadenosine phosphosulfate reductase family KHU1_1359 PF01384 Phosphate transporter family KHU1_1360 PF01747 ATP-sulfurylase KHU1_1360 PF14306 PUA-like domain KHU1_1362 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KHU1_1363 PF01903 CbiX KHU1_1366 PF00690 Cation transporter/ATPase, N-terminus KHU1_1366 PF00689 Cation transporting ATPase, C-terminus KHU1_1367 PF08340 Domain of unknown function (DUF1732) KHU1_1367 PF03755 YicC-like family, N-terminal region KHU1_1368 PF04025 Domain of unknown function (DUF370) KHU1_1369 PF00625 Guanylate kinase KHU1_1370 PF01192 RNA polymerase Rpb6 KHU1_1371 PF02441 Flavoprotein KHU1_1371 PF04127 DNA / pantothenate metabolism flavoprotein KHU1_1373 PF01327 Polypeptide deformylase KHU1_1374 PF00551 Formyl transferase KHU1_1374 PF02911 Formyl transferase, C-terminal domain KHU1_1375 PF01029 NusB family KHU1_1375 PF01189 16S rRNA methyltransferase RsmB/F KHU1_1376 PF04055 Radical SAM superfamily KHU1_1378 PF00069 Protein kinase domain KHU1_1378 PF03793 PASTA domain KHU1_1379 PF16745 RsgA N-terminal domain KHU1_1379 PF03193 RsgA GTPase KHU1_1381 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KHU1_1381 PF04263 Thiamin pyrophosphokinase, catalytic domain KHU1_1382 PF00830 Ribosomal L28 family KHU1_1383 PF03780 Asp23 family, cell envelope-related function KHU1_1384 PF02734 DAK2 domain KHU1_1384 PF13684 Dihydroxyacetone kinase family KHU1_1385 PF03315 Serine dehydratase beta chain KHU1_1385 PF01842 ACT domain KHU1_1386 PF03313 Serine dehydratase alpha chain KHU1_1387 PF00270 DEAD/DEAH box helicase KHU1_1387 PF17191 RecG wedge domain KHU1_1387 PF00271 Helicase conserved C-terminal domain KHU1_1388 PF03061 Thioesterase superfamily KHU1_1389 PF02504 Fatty acid synthesis protein KHU1_1390 PF00698 Acyl transferase domain KHU1_1392 PF00550 Phosphopantetheine attachment site KHU1_1393 PF14622 Ribonuclease-III-like KHU1_1393 PF00035 Double-stranded RNA binding motif KHU1_1394 PF02463 RecF/RecN/SMC N terminal domain KHU1_1394 PF06470 SMC proteins Flexible Hinge Domain KHU1_1395 PF02881 SRP54-type protein, helical bundle domain KHU1_1395 PF00448 SRP54-type protein, GTPase domain KHU1_1397 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KHU1_1398 PF00448 SRP54-type protein, GTPase domain KHU1_1398 PF02978 Signal peptide binding domain KHU1_1398 PF02881 SRP54-type protein, helical bundle domain KHU1_1399 PF00886 Ribosomal protein S16 KHU1_1401 PF11068 YlqD protein KHU1_1402 PF01782 RimM N-terminal domain KHU1_1402 PF05239 PRC-barrel domain KHU1_1403 PF01746 tRNA (Guanine-1)-methyltransferase KHU1_1404 PF01245 Ribosomal protein L19 KHU1_1405 PF01926 50S ribosome-binding GTPase KHU1_1406 PF01351 Ribonuclease HII KHU1_1408 PF01312 FlhB HrpN YscU SpaS Family KHU1_1409 PF00549 CoA-ligase KHU1_1409 PF08442 ATP-grasp domain KHU1_1410 PF00549 CoA-ligase KHU1_1410 PF02629 CoA binding domain KHU1_1411 PF02481 DNA recombination-mediator protein A KHU1_1412 PF01131 DNA topoisomerase KHU1_1412 PF01751 Toprim domain KHU1_1412 PF01396 Topoisomerase DNA binding C4 zinc finger KHU1_1413 PF01134 Glucose inhibited division protein A KHU1_1414 PF00589 Phage integrase family KHU1_1414 PF02899 Phage integrase, N-terminal SAM-like domain KHU1_1415 PF00227 Proteasome subunit KHU1_1416 PF00004 ATPase family associated with various cellular activities (AAA) KHU1_1416 PF10431 C-terminal, D2-small domain, of ClpB protein KHU1_1416 PF07724 AAA domain (Cdc48 subfamily) KHU1_1417 PF06018 CodY GAF-like domain KHU1_1417 PF08222 CodY helix-turn-helix domain KHU1_1418 PF00460 Flagella basal body rod protein KHU1_1419 PF00460 Flagella basal body rod protein KHU1_1419 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KHU1_1420 PF02049 Flagellar hook-basal body complex protein FliE KHU1_1421 PF08345 Flagellar M-ring protein C-terminal KHU1_1421 PF01514 Secretory protein of YscJ/FliF family KHU1_1422 PF14841 FliG middle domain KHU1_1422 PF01706 FliG C-terminal domain KHU1_1422 PF14842 FliG N-terminal domain KHU1_1423 PF02108 Flagellar assembly protein FliH KHU1_1424 PF02874 ATP synthase alpha/beta family, beta-barrel domain KHU1_1424 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KHU1_1424 PF18269 T3SS EscN ATPase C-terminal domain KHU1_1425 PF02050 Flagellar FliJ protein KHU1_1426 PF03448 MgtE intracellular N domain KHU1_1427 PF02120 Flagellar hook-length control protein FliK KHU1_1428 PF03963 Flagellar hook capping protein - N-terminal region KHU1_1429 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KHU1_1429 PF00460 Flagella basal body rod protein KHU1_1430 PF06289 Flagellar and Swarming motility proteins KHU1_1431 PF03748 Flagellar basal body-associated protein FliL KHU1_1432 PF02154 Flagellar motor switch protein FliM KHU1_1432 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KHU1_1433 PF04509 CheC-like family KHU1_1433 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KHU1_1434 PF00072 Response regulator receiver domain KHU1_1435 PF04347 Flagellar biosynthesis protein, FliO KHU1_1436 PF00813 FliP family KHU1_1437 PF01313 Bacterial export proteins, family 3 KHU1_1439 PF01312 FlhB HrpN YscU SpaS Family KHU1_1440 PF00771 FHIPEP family KHU1_1441 PF00448 SRP54-type protein, GTPase domain KHU1_1442 PF10609 NUBPL iron-transfer P-loop NTPase KHU1_1443 PF00072 Response regulator receiver domain KHU1_1443 PF01339 CheB methylesterase KHU1_1444 PF02895 Signal transducing histidine kinase, homodimeric domain KHU1_1444 PF01584 CheW-like domain KHU1_1444 PF07194 P2 response regulator binding domain KHU1_1444 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_1444 PF01627 Hpt domain KHU1_1445 PF01584 CheW-like domain KHU1_1446 PF04509 CheC-like family KHU1_1447 PF03975 CheD chemotactic sensory transduction KHU1_1448 PF04539 Sigma-70 region 3 KHU1_1448 PF04542 Sigma-70 region 2 KHU1_1448 PF04545 Sigma-70, region 4 KHU1_1450 PF00318 Ribosomal protein S2 KHU1_1451 PF00889 Elongation factor TS KHU1_1452 PF00696 Amino acid kinase family KHU1_1453 PF01765 Ribosome recycling factor KHU1_1454 PF01255 Putative undecaprenyl diphosphate synthase KHU1_1456 PF13288 DXP reductoisomerase C-terminal domain KHU1_1456 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KHU1_1456 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KHU1_1457 PF17820 PDZ domain KHU1_1457 PF02163 Peptidase family M50 KHU1_1458 PF03129 Anticodon binding domain KHU1_1458 PF04073 Aminoacyl-tRNA editing domain KHU1_1458 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KHU1_1459 PF11490 DNA polymerase III polC-type N-terminus II KHU1_1459 PF07733 Bacterial DNA polymerase III alpha NTPase domain KHU1_1459 PF00929 Exonuclease KHU1_1459 PF02811 PHP domain KHU1_1459 PF14579 Helix-hairpin-helix motif KHU1_1459 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KHU1_1459 PF14480 DNA polymerase III polC-type N-terminus I KHU1_1460 PF17384 RimP C-terminal SH3 domain KHU1_1460 PF02576 RimP N-terminal domain KHU1_1461 PF13184 NusA-like KH domain KHU1_1461 PF08529 NusA N-terminal domain KHU1_1461 PF00575 S1 RNA binding domain KHU1_1462 PF04296 Protein of unknown function (DUF448) KHU1_1463 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KHU1_1464 PF04760 Translation initiation factor IF-2, N-terminal region KHU1_1464 PF00009 Elongation factor Tu GTP binding domain KHU1_1464 PF11987 Translation-initiation factor 2 KHU1_1465 PF04456 Protein of unknown function (DUF503) KHU1_1466 PF02033 Ribosome-binding factor A KHU1_1467 PF16198 tRNA pseudouridylate synthase B C-terminal domain KHU1_1467 PF01509 TruB family pseudouridylate synthase (N terminal domain) KHU1_1468 PF06574 FAD synthetase KHU1_1468 PF01687 Riboflavin kinase KHU1_1469 PF00312 Ribosomal protein S15 KHU1_1470 PF00013 KH domain KHU1_1470 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KHU1_1470 PF01138 3' exoribonuclease family, domain 1 KHU1_1470 PF03725 3' exoribonuclease family, domain 2 KHU1_1470 PF00575 S1 RNA binding domain KHU1_1471 PF01522 Polysaccharide deacetylase KHU1_1472 PF00675 Insulinase (Peptidase family M16) KHU1_1472 PF05193 Peptidase M16 inactive domain KHU1_1473 PF05239 PRC-barrel domain KHU1_1474 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KHU1_1474 PF16924 Dipicolinate synthase subunit A N-terminal domain KHU1_1475 PF02441 Flavoprotein KHU1_1476 PF02774 Semialdehyde dehydrogenase, dimerisation domain KHU1_1476 PF01118 Semialdehyde dehydrogenase, NAD binding domain KHU1_1477 PF00696 Amino acid kinase family KHU1_1477 PF13840 ACT domain KHU1_1478 PF00701 Dihydrodipicolinate synthetase family KHU1_1479 PF17770 Ribonuclease J C-terminal domain KHU1_1479 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KHU1_1479 PF00753 Metallo-beta-lactamase superfamily KHU1_1480 PF00574 Clp protease KHU1_1481 PF14035 YlzJ-like protein KHU1_1482 PF17854 FtsK alpha domain KHU1_1482 PF01580 FtsK/SpoIIIE family KHU1_1482 PF09397 Ftsk gamma domain KHU1_1483 PF00392 Bacterial regulatory proteins, gntR family KHU1_1483 PF07702 UTRA domain KHU1_1484 PF07690 Major Facilitator Superfamily KHU1_1485 PF01047 MarR family KHU1_1486 PF03176 MMPL family KHU1_1487 PF05193 Peptidase M16 inactive domain KHU1_1488 PF05193 Peptidase M16 inactive domain KHU1_1488 PF00675 Insulinase (Peptidase family M16) KHU1_1490 PF11588 Protein of unknown function (DUF3243) KHU1_1491 PF11868 Protein of unknown function (DUF3388) KHU1_1492 PF13464 Domain of unknown function (DUF4115) KHU1_1493 PF01066 CDP-alcohol phosphatidyltransferase KHU1_1494 PF18146 Damage-inducible protein CinA KH domain KHU1_1494 PF02464 Competence-damaged protein KHU1_1494 PF00994 Probable molybdopterin binding domain KHU1_1495 PF00154 recA bacterial DNA recombination protein KHU1_1496 PF00144 Beta-lactamase KHU1_1497 PF00013 KH domain KHU1_1497 PF01966 HD domain KHU1_1497 PF12072 Domain of unknown function (DUF3552) KHU1_1498 PF13277 YmdB-like protein KHU1_1499 PF04232 Stage V sporulation protein S (SpoVS) KHU1_1500 PF08240 Alcohol dehydrogenase GroES-like domain KHU1_1500 PF00107 Zinc-binding dehydrogenase KHU1_1501 PF00155 Aminotransferase class I and II KHU1_1502 PF04055 Radical SAM superfamily KHU1_1502 PF01938 TRAM domain KHU1_1502 PF00919 Uncharacterized protein family UPF0004 KHU1_1503 PF06133 Control of competence regulator ComK, YlbF/YmcA KHU1_1504 PF10628 Outer spore coat protein E (CotE) KHU1_1505 PF05190 MutS family domain IV KHU1_1505 PF05192 MutS domain III KHU1_1505 PF05188 MutS domain II KHU1_1505 PF01624 MutS domain I KHU1_1505 PF00488 MutS domain V KHU1_1506 PF08676 MutL C terminal dimerisation domain KHU1_1506 PF01119 DNA mismatch repair protein, C-terminal domain KHU1_1507 PF00589 Phage integrase family KHU1_1507 PF14659 Phage integrase, N-terminal SAM-like domain KHU1_1512 PF00753 Metallo-beta-lactamase superfamily KHU1_1513 PF00698 Acyl transferase domain KHU1_1514 PF00698 Acyl transferase domain KHU1_1515 PF00698 Acyl transferase domain KHU1_1516 PF00550 Phosphopantetheine attachment site KHU1_1517 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal KHU1_1517 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal KHU1_1518 PF00378 Enoyl-CoA hydratase/isomerase KHU1_1519 PF00378 Enoyl-CoA hydratase/isomerase KHU1_1520 PF00501 AMP-binding enzyme KHU1_1520 PF00550 Phosphopantetheine attachment site KHU1_1520 PF08659 KR domain KHU1_1520 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1520 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1520 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1520 PF00668 Condensation domain KHU1_1520 PF13193 AMP-binding enzyme C-terminal domain KHU1_1520 PF14765 Polyketide synthase dehydratase KHU1_1521 PF14765 Polyketide synthase dehydratase KHU1_1521 PF08659 KR domain KHU1_1521 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1521 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1521 PF00550 Phosphopantetheine attachment site KHU1_1521 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1522 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1522 PF08242 Methyltransferase domain KHU1_1522 PF00550 Phosphopantetheine attachment site KHU1_1522 PF14765 Polyketide synthase dehydratase KHU1_1522 PF08659 KR domain KHU1_1522 PF08659 KR domain KHU1_1522 PF08242 Methyltransferase domain KHU1_1522 PF14765 Polyketide synthase dehydratase KHU1_1522 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1522 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1522 PF00550 Phosphopantetheine attachment site KHU1_1522 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1522 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1522 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1523 PF14765 Polyketide synthase dehydratase KHU1_1523 PF00550 Phosphopantetheine attachment site KHU1_1523 PF08659 KR domain KHU1_1523 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1523 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1523 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1523 PF00668 Condensation domain KHU1_1523 PF13193 AMP-binding enzyme C-terminal domain KHU1_1523 PF00501 AMP-binding enzyme KHU1_1524 PF14765 Polyketide synthase dehydratase KHU1_1524 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1524 PF00550 Phosphopantetheine attachment site KHU1_1524 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1524 PF08242 Methyltransferase domain KHU1_1524 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1524 PF00975 Thioesterase domain KHU1_1525 PF00067 Cytochrome P450 KHU1_1526 PF14040 Deoxyribonuclease NucA/NucB KHU1_1527 PF06912 Protein of unknown function (DUF1275) KHU1_1529 PF00082 Subtilase family KHU1_1531 PF05908 Poly-gamma-glutamate hydrolase KHU1_1532 PF02566 OsmC-like protein KHU1_1533 PF00893 Small Multidrug Resistance protein KHU1_1534 PF00893 Small Multidrug Resistance protein KHU1_1536 PF12788 YmaF family KHU1_1538 PF17209 Hfq protein KHU1_1539 PF14157 YmzC-like protein KHU1_1541 PF07972 NrdI Flavodoxin like KHU1_1542 PF08343 Ribonucleotide reductase N-terminal KHU1_1542 PF00317 Ribonucleotide reductase, all-alpha domain KHU1_1542 PF02867 Ribonucleotide reductase, barrel domain KHU1_1547 PF00004 ATPase family associated with various cellular activities (AAA) KHU1_1547 PF17866 AAA lid domain KHU1_1548 PF13167 GTP-binding GTPase N-terminal KHU1_1548 PF01926 50S ribosome-binding GTPase KHU1_1548 PF16360 GTP-binding GTPase Middle Region KHU1_1549 PF06838 Methionine gamma-lyase KHU1_1550 PF13411 MerR HTH family regulatory protein KHU1_1551 PF00120 Glutamine synthetase, catalytic domain KHU1_1551 PF03951 Glutamine synthetase, beta-Grasp domain KHU1_1554 PF04616 Glycosyl hydrolases family 43 KHU1_1554 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KHU1_1555 PF00480 ROK family KHU1_1556 PF01261 Xylose isomerase-like TIM barrel KHU1_1557 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KHU1_1557 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KHU1_1558 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KHU1_1558 PF00391 PEP-utilising enzyme, mobile domain KHU1_1562 PF08240 Alcohol dehydrogenase GroES-like domain KHU1_1562 PF00107 Zinc-binding dehydrogenase KHU1_1563 PF17094 Uncharacterised protein family (UPF0715) KHU1_1564 PF00583 Acetyltransferase (GNAT) family KHU1_1564 PF14268 YoaP-like KHU1_1568 PF16302 Domain of unknown function (DUF4944) KHU1_1570 PF13021 Domain of unknown function (DUF3885) KHU1_1572 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KHU1_1572 PF18416 N-acetylglucosamine binding protein domain 2 KHU1_1574 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain KHU1_1574 PF12708 Pectate lyase superfamily protein KHU1_1575 PF00692 dUTPase KHU1_1576 PF05908 Poly-gamma-glutamate hydrolase KHU1_1578 PF10710 Protein of unknown function (DUF2512) KHU1_1580 PF01726 LexA DNA binding domain KHU1_1580 PF00717 Peptidase S24-like KHU1_1581 PF01476 LysM domain KHU1_1582 PF00239 Resolvase, N terminal domain KHU1_1583 PF05979 Bacterial protein of unknown function (DUF896) KHU1_1584 PF02779 Transketolase, pyrimidine binding domain KHU1_1584 PF00456 Transketolase, thiamine diphosphate binding domain KHU1_1584 PF02780 Transketolase, C-terminal domain KHU1_1585 PF10747 Sporulation inhibitor of replication protein SirA KHU1_1586 PF03672 Uncharacterised protein family (UPF0154) KHU1_1587 PF09388 Spo0E like sporulation regulatory protein KHU1_1588 PF02683 Cytochrome C biogenesis protein transmembrane region KHU1_1589 PF00072 Response regulator receiver domain KHU1_1590 PF07301 Protein of unknown function (DUF1453) KHU1_1591 PF11084 Protein of unknown function (DUF2621) KHU1_1593 PF08179 Small acid-soluble spore protein P family KHU1_1595 PF00330 Aconitase family (aconitate hydratase) KHU1_1595 PF00694 Aconitase C-terminal domain KHU1_1596 PF00578 AhpC/TSA family KHU1_1597 PF13040 Fur-regulated basic protein B KHU1_1598 PF08177 Small acid-soluble spore protein N family KHU1_1600 PF03061 Thioesterase superfamily KHU1_1602 PF01521 Iron-sulphur cluster biosynthesis KHU1_1603 PF02660 Glycerol-3-phosphate acyltransferase KHU1_1604 PF13380 CoA binding domain KHU1_1605 PF00204 DNA gyrase B KHU1_1605 PF00986 DNA gyrase B subunit, carboxyl terminus KHU1_1605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_1605 PF01751 Toprim domain KHU1_1606 PF00521 DNA gyrase/topoisomerase IV, subunit A KHU1_1606 PF03989 DNA gyrase C-terminal domain, beta-propeller KHU1_1608 PF01235 Sodium:alanine symporter family KHU1_1609 PF00294 pfkB family carbohydrate kinase KHU1_1610 PF00107 Zinc-binding dehydrogenase KHU1_1610 PF08240 Alcohol dehydrogenase GroES-like domain KHU1_1611 PF01081 KDPG and KHG aldolase KHU1_1612 PF03786 D-mannonate dehydratase (UxuA) KHU1_1613 PF00106 short chain dehydrogenase KHU1_1614 PF00356 Bacterial regulatory proteins, lacI family KHU1_1615 PF07690 Major Facilitator Superfamily KHU1_1617 PF13761 Domain of unknown function (DUF4166) KHU1_1618 PF14158 YndJ-like protein KHU1_1621 PF00150 Cellulase (glycosyl hydrolase family 5) KHU1_1621 PF00942 Cellulose binding domain KHU1_1623 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_1623 PF00512 His Kinase A (phospho-acceptor) domain KHU1_1624 PF00072 Response regulator receiver domain KHU1_1624 PF00486 Transcriptional regulatory protein, C terminal KHU1_1625 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain KHU1_1625 PF17189 Glycosyl hydrolase family 30 beta sandwich domain KHU1_1626 PF04616 Glycosyl hydrolases family 43 KHU1_1626 PF03422 Carbohydrate binding module (family 6) KHU1_1627 PF00501 AMP-binding enzyme KHU1_1627 PF00975 Thioesterase domain KHU1_1627 PF00550 Phosphopantetheine attachment site KHU1_1627 PF00668 Condensation domain KHU1_1627 PF13193 AMP-binding enzyme C-terminal domain KHU1_1628 PF13193 AMP-binding enzyme C-terminal domain KHU1_1628 PF00668 Condensation domain KHU1_1628 PF00501 AMP-binding enzyme KHU1_1628 PF00550 Phosphopantetheine attachment site KHU1_1629 PF00501 AMP-binding enzyme KHU1_1629 PF00550 Phosphopantetheine attachment site KHU1_1629 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1629 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1629 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1629 PF00668 Condensation domain KHU1_1629 PF13193 AMP-binding enzyme C-terminal domain KHU1_1629 PF00202 Aminotransferase class-III KHU1_1630 PF00698 Acyl transferase domain KHU1_1632 PF01144 Coenzyme A transferase KHU1_1633 PF01144 Coenzyme A transferase KHU1_1635 PF00067 Cytochrome P450 KHU1_1636 PF06968 Biotin and Thiamin Synthesis associated domain KHU1_1636 PF04055 Radical SAM superfamily KHU1_1638 PF00155 Aminotransferase class I and II KHU1_1639 PF00202 Aminotransferase class-III KHU1_1640 PF03744 6-carboxyhexanoate--CoA ligase KHU1_1641 PF04138 GtrA-like protein KHU1_1642 PF00483 Nucleotidyl transferase KHU1_1643 PF09335 SNARE associated Golgi protein KHU1_1644 PF01039 Carboxyl transferase domain KHU1_1645 PF00378 Enoyl-CoA hydratase/isomerase KHU1_1646 PF00682 HMGL-like KHU1_1647 PF00364 Biotin-requiring enzyme KHU1_1648 PF02785 Biotin carboxylase C-terminal domain KHU1_1648 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KHU1_1648 PF00289 Biotin carboxylase, N-terminal domain KHU1_1649 PF00501 AMP-binding enzyme KHU1_1649 PF13193 AMP-binding enzyme C-terminal domain KHU1_1650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KHU1_1650 PF02770 Acyl-CoA dehydrogenase, middle domain KHU1_1650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KHU1_1651 PF02638 Glycosyl hydrolase-like 10 KHU1_1652 PF07098 Protein of unknown function (DUF1360) KHU1_1653 PF00501 AMP-binding enzyme KHU1_1653 PF00668 Condensation domain KHU1_1653 PF00550 Phosphopantetheine attachment site KHU1_1653 PF00975 Thioesterase domain KHU1_1653 PF13193 AMP-binding enzyme C-terminal domain KHU1_1655 PF00550 Phosphopantetheine attachment site KHU1_1655 PF00668 Condensation domain KHU1_1655 PF13193 AMP-binding enzyme C-terminal domain KHU1_1655 PF00501 AMP-binding enzyme KHU1_1656 PF00501 AMP-binding enzyme KHU1_1656 PF13193 AMP-binding enzyme C-terminal domain KHU1_1656 PF00668 Condensation domain KHU1_1656 PF00550 Phosphopantetheine attachment site KHU1_1658 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family KHU1_1659 PF01263 Aldose 1-epimerase KHU1_1660 PF01554 MatE KHU1_1661 PF16800 IseA DL-endopeptidase inhibitor KHU1_1662 PF00589 Phage integrase family KHU1_1663 PF12728 Helix-turn-helix domain KHU1_1665 PF07690 Major Facilitator Superfamily KHU1_1667 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KHU1_1667 PF02824 TGS domain KHU1_1667 PF03129 Anticodon binding domain KHU1_1667 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KHU1_1668 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_1668 PF03466 LysR substrate binding domain KHU1_1669 PF08240 Alcohol dehydrogenase GroES-like domain KHU1_1669 PF00107 Zinc-binding dehydrogenase KHU1_1670 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KHU1_1670 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHU1_1671 PF00310 Glutamine amidotransferases class-II KHU1_1671 PF04898 Glutamate synthase central domain KHU1_1671 PF01645 Conserved region in glutamate synthase KHU1_1671 PF01493 GXGXG motif KHU1_1672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_1672 PF03466 LysR substrate binding domain KHU1_1673 PF01472 PUA domain KHU1_1673 PF00696 Amino acid kinase family KHU1_1674 PF14748 Pyrroline-5-carboxylate reductase dimerisation KHU1_1674 PF03807 NADP oxidoreductase coenzyme F420-dependent KHU1_1675 PF02334 Replication terminator protein KHU1_1676 PF00106 short chain dehydrogenase KHU1_1677 PF06103 Bacterial protein of unknown function (DUF948) KHU1_1679 PF07690 Major Facilitator Superfamily KHU1_1680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KHU1_1680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KHU1_1681 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KHU1_1681 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KHU1_1682 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KHU1_1682 PF00384 Molybdopterin oxidoreductase KHU1_1682 PF01568 Molydopterin dinucleotide binding domain KHU1_1688 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH KHU1_1688 PF04740 LXG domain of WXG superfamily KHU1_1689 PF01588 Putative tRNA binding domain KHU1_1690 PF12833 Helix-turn-helix domain KHU1_1690 PF07883 Cupin domain KHU1_1691 PF13305 Tetracyclin repressor-like, C-terminal domain KHU1_1691 PF00440 Bacterial regulatory proteins, tetR family KHU1_1692 PF00753 Metallo-beta-lactamase superfamily KHU1_1694 PF01022 Bacterial regulatory protein, arsR family KHU1_1696 PF04238 Protein of unknown function (DUF420) KHU1_1697 PF18846 Bacterial archaeo-eukaryotic release factor family 5 KHU1_1699 PF17676 LD-carboxypeptidase C-terminal domain KHU1_1699 PF02016 LD-carboxypeptidase N-terminal domain KHU1_1701 PF01476 LysM domain KHU1_1701 PF06725 3D domain KHU1_1702 PF00270 DEAD/DEAH box helicase KHU1_1702 PF00271 Helicase conserved C-terminal domain KHU1_1702 PF00570 HRDC domain KHU1_1702 PF09382 RQC domain KHU1_1702 PF16124 RecQ zinc-binding KHU1_1703 PF02525 Flavodoxin-like fold KHU1_1704 PF01258 Prokaryotic dksA/traR C4-type zinc finger KHU1_1707 PF00011 Hsp20/alpha crystallin family KHU1_1710 PF08000 Bacterial PH domain KHU1_1712 PF00171 Aldehyde dehydrogenase family KHU1_1713 PF13249 Squalene-hopene cyclase N-terminal domain KHU1_1713 PF13243 Squalene-hopene cyclase C-terminal domain KHU1_1714 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KHU1_1714 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KHU1_1715 PF00209 Sodium:neurotransmitter symporter family KHU1_1716 PF01758 Sodium Bile acid symporter family KHU1_1717 PF00753 Metallo-beta-lactamase superfamily KHU1_1718 PF02817 e3 binding domain KHU1_1718 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KHU1_1718 PF00364 Biotin-requiring enzyme KHU1_1719 PF02779 Transketolase, pyrimidine binding domain KHU1_1719 PF16870 2-oxoglutarate dehydrogenase C-terminal KHU1_1719 PF00676 Dehydrogenase E1 component KHU1_1720 PF00092 von Willebrand factor type A domain KHU1_1721 PF07728 AAA domain (dynein-related subfamily) KHU1_1722 PF13627 Prokaryotic lipoprotein-attachment site KHU1_1722 PF00080 Copper/zinc superoxide dismutase (SODC) KHU1_1723 PF00877 NlpC/P60 family KHU1_1723 PF01476 LysM domain KHU1_1724 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KHU1_1725 PF02457 DisA bacterial checkpoint controller nucleotide-binding KHU1_1725 PF10372 Bacterial membrane-spanning protein N-terminus KHU1_1726 PF01554 MatE KHU1_1727 PF01740 STAS domain KHU1_1728 PF02585 GlcNAc-PI de-N-acetylase KHU1_1729 PF08830 Protein of unknown function (DUF1806) KHU1_1731 PF00892 EamA-like transporter family KHU1_1734 PF14552 Tautomerase enzyme KHU1_1736 PF01638 HxlR-like helix-turn-helix KHU1_1737 PF00881 Nitroreductase family KHU1_1738 PF01738 Dienelactone hydrolase family KHU1_1739 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHU1_1740 PF11755 Protein of unknown function (DUF3311) KHU1_1741 PF00474 Sodium:solute symporter family KHU1_1743 PF00232 Glycosyl hydrolase family 1 KHU1_1744 PF00392 Bacterial regulatory proteins, gntR family KHU1_1744 PF07702 UTRA domain KHU1_1745 PF01471 Putative peptidoglycan binding domain KHU1_1745 PF03572 Peptidase family S41 KHU1_1745 PF17820 PDZ domain KHU1_1746 PF08241 Methyltransferase domain KHU1_1748 PF02557 D-alanyl-D-alanine carboxypeptidase KHU1_1749 PF01048 Phosphorylase superfamily KHU1_1750 PF14191 YodL-like KHU1_1751 PF01569 PAP2 superfamily KHU1_1752 PF14162 YozD-like protein KHU1_1756 PF06855 YozE SAM-like fold KHU1_1757 PF14122 YokU-like protein, putative antitoxin KHU1_1758 PF12544 Lysine-2,3-aminomutase KHU1_1759 PF00583 Acetyltransferase (GNAT) family KHU1_1760 PF01546 Peptidase family M20/M25/M40 KHU1_1760 PF07687 Peptidase dimerisation domain KHU1_1761 PF01144 Coenzyme A transferase KHU1_1762 PF01144 Coenzyme A transferase KHU1_1763 PF00202 Aminotransferase class-III KHU1_1764 PF06445 GyrI-like small molecule binding domain KHU1_1765 PF00583 Acetyltransferase (GNAT) family KHU1_1769 PF12996 DUF based on E. rectale Gene description (DUF3880) KHU1_1770 PF02333 Phytase KHU1_1771 PF02719 Polysaccharide biosynthesis protein KHU1_1772 PF01641 SelR domain KHU1_1773 PF01625 Peptide methionine sulfoxide reductase KHU1_1774 PF01047 MarR family KHU1_1775 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) KHU1_1776 PF13472 GDSL-like Lipase/Acylhydrolase family KHU1_1777 PF02630 SCO1/SenC KHU1_1778 PF10751 Protein of unknown function (DUF2535) KHU1_1780 PF00158 Sigma-54 interaction domain KHU1_1780 PF08461 Ribonuclease R winged-helix domain KHU1_1781 PF03006 Haemolysin-III related KHU1_1783 PF00186 Dihydrofolate reductase KHU1_1784 PF00303 Thymidylate synthase KHU1_1785 PF14005 YpjP-like protein KHU1_1786 PF04445 Putative SAM-dependent methyltransferase KHU1_1787 PF06491 Disulphide isomerase KHU1_1788 PF00920 Dehydratase family KHU1_1789 PF13769 Virulence factor KHU1_1789 PF08712 Scaffold protein Nfu/NifU N terminal KHU1_1790 PF01966 HD domain KHU1_1791 PF00255 Glutathione peroxidase KHU1_1792 PF04204 Homoserine O-succinyltransferase KHU1_1793 PF00534 Glycosyl transferases group 1 KHU1_1793 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KHU1_1794 PF00313 'Cold-shock' DNA-binding domain KHU1_1796 PF10819 Protein of unknown function (DUF2564) KHU1_1797 PF10782 Zinc-finger KHU1_1798 PF13456 Reverse transcriptase-like KHU1_1799 PF02592 Putative vitamin uptake transporter KHU1_1800 PF13456 Reverse transcriptase-like KHU1_1802 PF01367 5'-3' exonuclease, C-terminal SAM fold KHU1_1802 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KHU1_1803 PF10752 Protein of unknown function (DUF2533) KHU1_1804 PF00350 Dynamin family KHU1_1805 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family KHU1_1806 PF02797 Chalcone and stilbene synthases, C-terminal domain KHU1_1806 PF00195 Chalcone and stilbene synthases, N-terminal domain KHU1_1810 PF04239 Protein of unknown function (DUF421) KHU1_1811 PF04239 Protein of unknown function (DUF421) KHU1_1812 PF00857 Isochorismatase family KHU1_1814 PF00860 Permease family KHU1_1815 PF00156 Phosphoribosyl transferase domain KHU1_1816 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KHU1_1819 PF02926 THUMP domain KHU1_1819 PF01170 Putative RNA methylase family UPF0020 KHU1_1820 PF05103 DivIVA protein KHU1_1821 PF06908 YspA SLOG family KHU1_1822 PF11122 Inner spore coat protein D KHU1_1823 PF13482 RNase_H superfamily KHU1_1824 PF00270 DEAD/DEAH box helicase KHU1_1824 PF09369 Domain of unknown function (DUF1998) KHU1_1824 PF00271 Helicase conserved C-terminal domain KHU1_1825 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KHU1_1827 PF14179 YppG-like protein KHU1_1828 PF14178 YppF-like protein KHU1_1829 PF08807 Bacterial domain of unknown function (DUF1798) KHU1_1830 PF17522 Family of unknown function (DUF5446) KHU1_1831 PF10720 Protein of unknown function (DUF2515) KHU1_1832 PF03838 Recombination protein U KHU1_1833 PF00905 Penicillin binding protein transpeptidase domain KHU1_1833 PF00912 Transglycosylase KHU1_1835 PF00730 HhH-GPD superfamily base excision DNA repair protein KHU1_1835 PF00633 Helix-hairpin-helix motif KHU1_1835 PF10576 Iron-sulfur binding domain of endonuclease III KHU1_1836 PF07261 Replication initiation and membrane attachment KHU1_1837 PF00152 tRNA synthetases class II (D, K and N) KHU1_1837 PF01336 OB-fold nucleic acid binding domain KHU1_1839 PF17881 Domain of unknown function (DUF5590) KHU1_1839 PF03413 Peptidase propeptide and YPEB domain KHU1_1840 PF13307 Helicase C-terminal domain KHU1_1840 PF04851 Type III restriction enzyme, res subunit KHU1_1840 PF00929 Exonuclease KHU1_1841 PF02261 Aspartate decarboxylase KHU1_1842 PF02569 Pantoate-beta-alanine ligase KHU1_1843 PF02548 Ketopantoate hydroxymethyltransferase KHU1_1844 PF02237 Biotin protein ligase C terminal domain KHU1_1844 PF03099 Biotin/lipoate A/B protein ligase family KHU1_1844 PF08279 HTH domain KHU1_1845 PF01743 Poly A polymerase head domain KHU1_1845 PF12627 Probable RNA and SrmB- binding site of polymerase A KHU1_1845 PF13735 tRNA nucleotidyltransferase domain 2 putative KHU1_1846 PF00534 Glycosyl transferases group 1 KHU1_1846 PF13439 Glycosyltransferase Family 4 KHU1_1847 PF02585 GlcNAc-PI de-N-acetylase KHU1_1848 PF02142 MGS-like domain KHU1_1849 PF01113 Dihydrodipicolinate reductase, N-terminus KHU1_1849 PF05173 Dihydrodipicolinate reductase, C-terminus KHU1_1850 PF03819 MazG nucleotide pyrophosphohydrolase domain KHU1_1851 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHU1_1851 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHU1_1852 PF00190 Cupin KHU1_1853 PF09577 Sporulation protein YpjB (SpoYpjB) KHU1_1854 PF07187 Protein of unknown function (DUF1405) KHU1_1855 PF00032 Cytochrome b(C-terminal)/b6/petD KHU1_1855 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KHU1_1856 PF00033 Cytochrome b/b6/petB KHU1_1858 PF10673 Protein of unknown function (DUF2487) KHU1_1859 PF08858 IDEAL domain KHU1_1859 PF08864 UPF0302 domain KHU1_1862 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KHU1_1863 PF02153 Prephenate dehydrogenase KHU1_1863 PF01842 ACT domain KHU1_1864 PF00155 Aminotransferase class I and II KHU1_1865 PF00290 Tryptophan synthase alpha chain KHU1_1866 PF00291 Pyridoxal-phosphate dependent enzyme KHU1_1867 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KHU1_1868 PF00218 Indole-3-glycerol phosphate synthase KHU1_1869 PF02885 Glycosyl transferase family, helical bundle domain KHU1_1869 PF00591 Glycosyl transferase family, a/b domain KHU1_1870 PF04715 Anthranilate synthase component I, N terminal region KHU1_1870 PF00425 chorismate binding enzyme KHU1_1871 PF07736 Chorismate mutase type I KHU1_1872 PF01761 3-dehydroquinate synthase KHU1_1873 PF01264 Chorismate synthase KHU1_1874 PF01739 CheR methyltransferase, SAM binding domain KHU1_1874 PF03705 CheR methyltransferase, all-alpha domain KHU1_1875 PF00334 Nucleoside diphosphate kinase KHU1_1876 PF00348 Polyprenyl synthetase KHU1_1877 PF01209 ubiE/COQ5 methyltransferase family KHU1_1878 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KHU1_1879 PF02081 Tryptophan RNA-binding attenuator protein KHU1_1880 PF01227 GTP cyclohydrolase I KHU1_1881 PF00216 Bacterial DNA-binding protein KHU1_1882 PF09547 Stage IV sporulation protein A (spore_IV_A) KHU1_1884 PF10966 Protein of unknown function (DUF2768) KHU1_1885 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KHU1_1885 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KHU1_1886 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KHU1_1886 PF01926 50S ribosome-binding GTPase KHU1_1888 PF01070 FMN-dependent dehydrogenase KHU1_1889 PF00575 S1 RNA binding domain KHU1_1890 PF02224 Cytidylate kinase KHU1_1891 PF17313 Family of unknown function (DUF5359) KHU1_1892 PF07238 PilZ domain KHU1_1892 PF12945 Flagellar protein YcgR KHU1_1893 PF03413 Peptidase propeptide and YPEB domain KHU1_1893 PF14620 YpeB sporulation KHU1_1895 PF13367 PrsW family intramembrane metalloprotease KHU1_1897 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KHU1_1897 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KHU1_1898 PF05389 Negative regulator of genetic competence (MecA) KHU1_1899 PF00149 Calcineurin-like phosphoesterase KHU1_1900 PF10864 Protein of unknown function (DUF2663) KHU1_1901 PF01476 LysM domain KHU1_1902 PF02517 CPBP intramembrane metalloprotease KHU1_1903 PF00271 Helicase conserved C-terminal domain KHU1_1903 PF00270 DEAD/DEAH box helicase KHU1_1904 PF14493 Helix-turn-helix domain KHU1_1906 PF12822 ECF transporter, substrate-specific component KHU1_1907 PF01842 ACT domain KHU1_1907 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KHU1_1907 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KHU1_1909 PF08281 Sigma-70, region 4 KHU1_1909 PF04542 Sigma-70 region 2 KHU1_1910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_1910 PF18698 Histidine kinase sensor domain KHU1_1910 PF00512 His Kinase A (phospho-acceptor) domain KHU1_1910 PF00989 PAS fold KHU1_1910 PF00672 HAMP domain KHU1_1911 PF00486 Transcriptional regulatory protein, C terminal KHU1_1911 PF00072 Response regulator receiver domain KHU1_1912 PF01578 Cytochrome C assembly protein KHU1_1913 PF05140 ResB-like family KHU1_1914 PF00578 AhpC/TSA family KHU1_1915 PF01479 S4 domain KHU1_1915 PF00849 RNA pseudouridylate synthase KHU1_1916 PF07670 Nucleoside recognition KHU1_1917 PF07670 Nucleoside recognition KHU1_1918 PF00768 D-alanyl-D-alanine carboxypeptidase KHU1_1918 PF07943 Penicillin-binding protein 5, C-terminal domain KHU1_1919 PF13047 Protein of unknown function (DUF3907) KHU1_1920 PF04079 Segregation and condensation complex subunit ScpB KHU1_1921 PF02616 Segregation and condensation protein ScpA KHU1_1922 PF03745 Domain of unknown function (DUF309) KHU1_1923 PF00583 Acetyltransferase (GNAT) family KHU1_1924 PF00885 6,7-dimethyl-8-ribityllumazine synthase KHU1_1925 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KHU1_1925 PF00925 GTP cyclohydrolase II KHU1_1926 PF00677 Lumazine binding domain KHU1_1927 PF01872 RibD C-terminal domain KHU1_1927 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KHU1_1929 PF10502 Signal peptidase, peptidase S26 KHU1_1931 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KHU1_1932 PF06207 Protein of unknown function (DUF1002) KHU1_1933 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KHU1_1933 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KHU1_1934 PF03323 Bacillus/Clostridium GerA spore germination protein KHU1_1935 PF14097 Stage V sporulation protein AE1 KHU1_1936 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KHU1_1937 PF07451 Stage V sporulation protein AD (SpoVAD) KHU1_1938 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KHU1_1939 PF13782 Stage V sporulation protein AB KHU1_1940 PF12164 Stage V sporulation protein AA KHU1_1941 PF04542 Sigma-70 region 2 KHU1_1941 PF04545 Sigma-70, region 4 KHU1_1941 PF04539 Sigma-70 region 3 KHU1_1942 PF13581 Histidine kinase-like ATPase domain KHU1_1943 PF01740 STAS domain KHU1_1944 PF07943 Penicillin-binding protein 5, C-terminal domain KHU1_1944 PF00768 D-alanyl-D-alanine carboxypeptidase KHU1_1945 PF01048 Phosphorylase superfamily KHU1_1946 PF01676 Metalloenzyme superfamily KHU1_1947 PF00589 Phage integrase family KHU1_1947 PF02899 Phage integrase, N-terminal SAM-like domain KHU1_1948 PF14004 Protein of unknown function (DUF4227) KHU1_1949 PF01475 Ferric uptake regulator family KHU1_1950 PF01944 Stage II sporulation protein M KHU1_1953 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KHU1_1953 PF00390 Malic enzyme, N-terminal domain KHU1_1953 PF03949 Malic enzyme, NAD binding domain KHU1_1954 PF03553 Na+/H+ antiporter family KHU1_1955 PF00206 Lyase KHU1_1955 PF10415 Fumarase C C-terminus KHU1_1956 PF17763 Glutaminase/Asparaginase C-terminal domain KHU1_1956 PF00710 Asparaginase, N-terminal KHU1_1957 PF01381 Helix-turn-helix KHU1_1959 PF00293 NUDIX domain KHU1_1960 PF00248 Aldo/keto reductase family KHU1_1962 PF12146 Serine aminopeptidase, S33 KHU1_1963 PF10827 Protein of unknown function (DUF2552) KHU1_1964 PF01521 Iron-sulphur cluster biosynthesis KHU1_1965 PF13673 Acetyltransferase (GNAT) domain KHU1_1965 PF04229 GrpB protein KHU1_1966 PF03992 Antibiotic biosynthesis monooxygenase KHU1_1967 PF00583 Acetyltransferase (GNAT) family KHU1_1968 PF00817 impB/mucB/samB family KHU1_1968 PF11799 impB/mucB/samB family C-terminal domain KHU1_1969 PF08863 YolD-like protein KHU1_1970 PF14164 YqzH-like protein KHU1_1971 PF01594 AI-2E family transporter KHU1_1973 PF00485 Phosphoribulokinase / Uridine kinase family KHU1_1974 PF00291 Pyridoxal-phosphate dependent enzyme KHU1_1975 PF00106 short chain dehydrogenase KHU1_1976 PF00753 Metallo-beta-lactamase superfamily KHU1_1977 PF03807 NADP oxidoreductase coenzyme F420-dependent KHU1_1977 PF14748 Pyrroline-5-carboxylate reductase dimerisation KHU1_1978 PF00378 Enoyl-CoA hydratase/isomerase KHU1_1979 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal KHU1_1979 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal KHU1_1980 PF00067 Cytochrome P450 KHU1_1981 PF00550 Phosphopantetheine attachment site KHU1_1981 PF14765 Polyketide synthase dehydratase KHU1_1981 PF08242 Methyltransferase domain KHU1_1981 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1981 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1981 PF08659 KR domain KHU1_1981 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1982 PF14765 Polyketide synthase dehydratase KHU1_1982 PF08242 Methyltransferase domain KHU1_1982 PF08659 KR domain KHU1_1982 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1982 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1982 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1982 PF00550 Phosphopantetheine attachment site KHU1_1983 PF14765 Polyketide synthase dehydratase KHU1_1983 PF13193 AMP-binding enzyme C-terminal domain KHU1_1983 PF00668 Condensation domain KHU1_1983 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1983 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1983 PF00501 AMP-binding enzyme KHU1_1983 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1983 PF08659 KR domain KHU1_1983 PF00550 Phosphopantetheine attachment site KHU1_1984 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1984 PF14765 Polyketide synthase dehydratase KHU1_1984 PF08659 KR domain KHU1_1984 PF00550 Phosphopantetheine attachment site KHU1_1984 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1984 PF00668 Condensation domain KHU1_1984 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1984 PF13193 AMP-binding enzyme C-terminal domain KHU1_1984 PF00501 AMP-binding enzyme KHU1_1985 PF00550 Phosphopantetheine attachment site KHU1_1985 PF08242 Methyltransferase domain KHU1_1985 PF08659 KR domain KHU1_1985 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1985 PF14765 Polyketide synthase dehydratase KHU1_1985 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1985 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1987 PF14765 Polyketide synthase dehydratase KHU1_1987 PF00550 Phosphopantetheine attachment site KHU1_1987 PF08659 KR domain KHU1_1987 PF16197 Ketoacyl-synthetase C-terminal extension KHU1_1987 PF00109 Beta-ketoacyl synthase, N-terminal domain KHU1_1987 PF02801 Beta-ketoacyl synthase, C-terminal domain KHU1_1989 PF13193 AMP-binding enzyme C-terminal domain KHU1_1989 PF00501 AMP-binding enzyme KHU1_1992 PF00698 Acyl transferase domain KHU1_1992 PF03060 Nitronate monooxygenase KHU1_1993 PF02357 Transcription termination factor nusG KHU1_1993 PF00467 KOW motif KHU1_1994 PF03466 LysR substrate binding domain KHU1_1994 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_1996 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KHU1_1997 PF12146 Serine aminopeptidase, S33 KHU1_1998 PF00471 Ribosomal protein L33 KHU1_1999 PF12706 Beta-lactamase superfamily domain KHU1_2000 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KHU1_2000 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KHU1_2001 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KHU1_2001 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KHU1_2002 PF11798 IMS family HHH motif KHU1_2002 PF00817 impB/mucB/samB family KHU1_2002 PF11799 impB/mucB/samB family C-terminal domain KHU1_2004 PF02096 60Kd inner membrane protein KHU1_2005 PF01546 Peptidase family M20/M25/M40 KHU1_2005 PF07687 Peptidase dimerisation domain KHU1_2006 PF01039 Carboxyl transferase domain KHU1_2008 PF03734 L,D-transpeptidase catalytic domain KHU1_2009 PF06081 Aromatic acid exporter family member 1 KHU1_2009 PF11728 Putative aromatic acid exporter C-terminal domain KHU1_2010 PF00005 ABC transporter KHU1_2011 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2012 PF00497 Bacterial extracellular solute-binding proteins, family 3 KHU1_2014 PF13333 Integrase core domain KHU1_2014 PF13276 HTH-like domain KHU1_2014 PF00665 Integrase core domain KHU1_2015 PF06491 Disulphide isomerase KHU1_2016 PF00781 Diacylglycerol kinase catalytic domain KHU1_2017 PF00364 Biotin-requiring enzyme KHU1_2017 PF02817 e3 binding domain KHU1_2017 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KHU1_2018 PF02779 Transketolase, pyrimidine binding domain KHU1_2018 PF02780 Transketolase, C-terminal domain KHU1_2019 PF00676 Dehydrogenase E1 component KHU1_2020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KHU1_2020 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHU1_2021 PF00871 Acetokinase family KHU1_2022 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KHU1_2022 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KHU1_2023 PF01515 Phosphate acetyl/butaryl transferase KHU1_2024 PF00158 Sigma-54 interaction domain KHU1_2024 PF02954 Bacterial regulatory protein, Fis family KHU1_2024 PF00989 PAS fold KHU1_2025 PF11118 Protein of unknown function (DUF2627) KHU1_2027 PF03972 MmgE/PrpD family KHU1_2028 PF00285 Citrate synthase, C-terminal domain KHU1_2029 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KHU1_2029 PF02770 Acyl-CoA dehydrogenase, middle domain KHU1_2029 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KHU1_2030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KHU1_2030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KHU1_2031 PF02803 Thiolase, C-terminal domain KHU1_2031 PF00108 Thiolase, N-terminal domain KHU1_2032 PF03009 Glycerophosphoryl diester phosphodiesterase family KHU1_2033 PF01520 N-acetylmuramoyl-L-alanine amidase KHU1_2038 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KHU1_2039 PF10676 Spore germination protein gerPA/gerPF KHU1_2040 PF10676 Spore germination protein gerPA/gerPF KHU1_2041 PF01168 Alanine racemase, N-terminal domain KHU1_2041 PF00842 Alanine racemase, C-terminal domain KHU1_2042 PF00072 Response regulator receiver domain KHU1_2042 PF08769 Sporulation initiation factor Spo0A C terminal KHU1_2043 PF05580 SpoIVB peptidase S55 KHU1_2043 PF17820 PDZ domain KHU1_2044 PF13476 AAA domain KHU1_2045 PF02863 Arginine repressor, C-terminal domain KHU1_2045 PF01316 Arginine repressor, DNA binding domain KHU1_2046 PF01479 S4 domain KHU1_2046 PF01728 FtsJ-like methyltransferase KHU1_2048 PF00348 Polyprenyl synthetase KHU1_2049 PF02609 Exonuclease VII small subunit KHU1_2050 PF02601 Exonuclease VII, large subunit KHU1_2050 PF13742 OB-fold nucleic acid binding domain KHU1_2051 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KHU1_2051 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KHU1_2052 PF01029 NusB family KHU1_2053 PF03780 Asp23 family, cell envelope-related function KHU1_2054 PF02785 Biotin carboxylase C-terminal domain KHU1_2054 PF00289 Biotin carboxylase, N-terminal domain KHU1_2054 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KHU1_2055 PF00364 Biotin-requiring enzyme KHU1_2056 PF12685 SpoIIIAH-like protein KHU1_2058 PF09581 Stage III sporulation protein AF (Spore_III_AF) KHU1_2059 PF09546 Stage III sporulation protein AE (spore_III_AE) KHU1_2060 PF06686 Stage III sporulation protein AC/AD protein family KHU1_2061 PF06686 Stage III sporulation protein AC/AD protein family KHU1_2062 PF09548 Stage III sporulation protein AB (spore_III_AB) KHU1_2064 PF10942 Protein of unknown function (DUF2619) KHU1_2065 PF08207 Elongation factor P (EF-P) KOW-like domain KHU1_2065 PF01132 Elongation factor P (EF-P) OB domain KHU1_2065 PF09285 Elongation factor P, C-terminal KHU1_2066 PF01321 Creatinase/Prolidase N-terminal domain KHU1_2066 PF00557 Metallopeptidase family M24 KHU1_2067 PF11085 Conserved membrane protein YqhR KHU1_2068 PF07136 Protein of unknown function (DUF1385) KHU1_2070 PF01734 Patatin-like phospholipase KHU1_2071 PF02742 Iron dependent repressor, metal binding and dimerisation domain KHU1_2071 PF01325 Iron dependent repressor, N-terminal DNA binding domain KHU1_2072 PF03099 Biotin/lipoate A/B protein ligase family KHU1_2073 PF00581 Rhodanese-like domain KHU1_2074 PF02347 Glycine cleavage system P-protein KHU1_2075 PF02347 Glycine cleavage system P-protein KHU1_2076 PF01571 Aminomethyltransferase folate-binding domain KHU1_2076 PF08669 Glycine cleavage T-protein C-terminal barrel domain KHU1_2077 PF00271 Helicase conserved C-terminal domain KHU1_2077 PF00176 SNF2 family N-terminal domain KHU1_2078 PF11079 Bacterial protein YqhG of unknown function KHU1_2079 PF08671 Anti-repressor SinI KHU1_2080 PF01381 Helix-turn-helix KHU1_2080 PF08671 Anti-repressor SinI KHU1_2081 PF12389 Camelysin metallo-endopeptidase KHU1_2084 PF13028 Protein of unknown function (DUF3889) KHU1_2085 PF14038 YqzE-like protein KHU1_2086 PF14173 ComG operon protein 7 KHU1_2087 PF15980 Putative Competence protein ComGF KHU1_2089 PF07963 Prokaryotic N-terminal methylation motif KHU1_2090 PF07963 Prokaryotic N-terminal methylation motif KHU1_2091 PF00482 Type II secretion system (T2SS), protein F KHU1_2092 PF00437 Type II/IV secretion system protein KHU1_2093 PF01544 CorA-like Mg2+ transporter protein KHU1_2094 PF03471 Transporter associated domain KHU1_2094 PF01595 Cyclin M transmembrane N-terminal domain KHU1_2094 PF00571 CBS domain KHU1_2095 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain KHU1_2095 PF01740 STAS domain KHU1_2096 PF03960 ArsC family KHU1_2097 PF11117 Protein of unknown function (DUF2626) KHU1_2098 PF00753 Metallo-beta-lactamase superfamily KHU1_2099 PF01910 Thiamine-binding protein KHU1_2101 PF00246 Zinc carboxypeptidase KHU1_2102 PF00480 ROK family KHU1_2103 PF06014 Bacterial protein of unknown function (DUF910) KHU1_2104 PF03553 Na+/H+ antiporter family KHU1_2105 PF01812 5-formyltetrahydrofolate cyclo-ligase family KHU1_2106 PF00471 Ribosomal protein L33 KHU1_2109 PF00005 ABC transporter KHU1_2110 PF00005 ABC transporter KHU1_2111 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2112 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2113 PF12849 PBP superfamily domain KHU1_2115 PF07690 Major Facilitator Superfamily KHU1_2116 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KHU1_2116 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KHU1_2117 PF04306 Protein of unknown function (DUF456) KHU1_2118 PF06691 Protein of unknown function (DUF1189) KHU1_2120 PF04551 GcpE protein KHU1_2123 PF01475 Ferric uptake regulator family KHU1_2124 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHU1_2124 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHU1_2125 PF11116 Protein of unknown function (DUF2624) KHU1_2126 PF01261 Xylose isomerase-like TIM barrel KHU1_2127 PF00271 Helicase conserved C-terminal domain KHU1_2127 PF00270 DEAD/DEAH box helicase KHU1_2128 PF14181 YqfQ-like protein KHU1_2129 PF02401 LytB protein KHU1_2130 PF01784 NIF3 (NGG1p interacting factor 3) KHU1_2131 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KHU1_2132 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KHU1_2133 PF03979 Sigma-70 factor, region 1.1 KHU1_2133 PF04545 Sigma-70, region 4 KHU1_2133 PF00140 Sigma-70 factor, region 1.2 KHU1_2133 PF04542 Sigma-70 region 2 KHU1_2133 PF04539 Sigma-70 region 3 KHU1_2134 PF01807 CHC2 zinc finger KHU1_2134 PF08275 DNA primase catalytic core, N-terminal domain KHU1_2134 PF10410 DnaB-helicase binding domain of primase KHU1_2135 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KHU1_2136 PF03618 Kinase/pyrophosphorylase KHU1_2137 PF00571 CBS domain KHU1_2137 PF08279 HTH domain KHU1_2138 PF02092 Glycyl-tRNA synthetase beta subunit KHU1_2139 PF02091 Glycyl-tRNA synthetase alpha subunit KHU1_2140 PF02565 Recombination protein O C terminal KHU1_2140 PF11967 Recombination protein O N terminal KHU1_2141 PF14006 YqzL-like protein KHU1_2142 PF07650 KH domain KHU1_2142 PF01926 50S ribosome-binding GTPase KHU1_2143 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KHU1_2144 PF01219 Prokaryotic diacylglycerol kinase KHU1_2145 PF02130 Uncharacterized protein family UPF0054 KHU1_2146 PF01966 HD domain KHU1_2146 PF07697 7TM-HD extracellular KHU1_2146 PF07698 7TM receptor with intracellular HD hydrolase KHU1_2147 PF02562 PhoH-like protein KHU1_2148 PF06898 Putative stage IV sporulation protein YqfD KHU1_2149 PF07873 YabP family KHU1_2151 PF12127 SigmaW regulon antibacterial KHU1_2152 PF01957 NfeD-like C-terminal, partner-binding KHU1_2152 PF01972 Serine dehydrogenase proteinase KHU1_2153 PF09424 Yqey-like protein KHU1_2154 PF01165 Ribosomal protein S21 KHU1_2155 PF02690 Na+/Pi-cotransporter KHU1_2156 PF04055 Radical SAM superfamily KHU1_2156 PF01938 TRAM domain KHU1_2156 PF00919 Uncharacterized protein family UPF0004 KHU1_2157 PF04452 RNA methyltransferase KHU1_2159 PF00226 DnaJ domain KHU1_2159 PF01556 DnaJ C terminal domain KHU1_2159 PF00684 DnaJ central domain KHU1_2160 PF00012 Hsp70 protein KHU1_2161 PF01025 GrpE KHU1_2162 PF01628 HrcA protein C terminal domain KHU1_2163 PF04055 Radical SAM superfamily KHU1_2163 PF06969 HemN C-terminal domain KHU1_2164 PF00679 Elongation factor G C-terminus KHU1_2164 PF06421 GTP-binding protein LepA C-terminus KHU1_2164 PF03144 Elongation factor Tu domain 2 KHU1_2164 PF00009 Elongation factor Tu GTP binding domain KHU1_2165 PF12438 Protein of unknown function (DUF3679) KHU1_2166 PF07454 Stage II sporulation protein P (SpoIIP) KHU1_2167 PF03418 Germination protease KHU1_2168 PF01649 Ribosomal protein S20 KHU1_2169 PF06144 DNA polymerase III, delta subunit KHU1_2170 PF00753 Metallo-beta-lactamase superfamily KHU1_2170 PF13567 Domain of unknown function (DUF4131) KHU1_2170 PF03772 Competence protein KHU1_2171 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KHU1_2172 PF10531 SLBB domain KHU1_2173 PF03807 NADP oxidoreductase coenzyme F420-dependent KHU1_2173 PF14748 Pyrroline-5-carboxylate reductase dimerisation KHU1_2174 PF13649 Methyltransferase domain KHU1_2176 PF01966 HD domain KHU1_2177 PF01467 Cytidylyltransferase-like KHU1_2178 PF01985 CRS1 / YhbY (CRM) domain KHU1_2179 PF01488 Shikimate / quinate 5-dehydrogenase KHU1_2179 PF08501 Shikimate dehydrogenase substrate binding domain KHU1_2179 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KHU1_2180 PF01926 50S ribosome-binding GTPase KHU1_2182 PF08970 Sporulation inhibitor A KHU1_2183 PF00657 GDSL-like Lipase/Acylhydrolase KHU1_2184 PF01522 Polysaccharide deacetylase KHU1_2185 PF09335 SNARE associated Golgi protein KHU1_2191 PF04740 LXG domain of WXG superfamily KHU1_2191 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH KHU1_2194 PF12833 Helix-turn-helix domain KHU1_2194 PF06445 GyrI-like small molecule binding domain KHU1_2196 PF00180 Isocitrate/isopropylmalate dehydrogenase KHU1_2198 PF07690 Major Facilitator Superfamily KHU1_2199 PF00583 Acetyltransferase (GNAT) family KHU1_2200 PF05163 DinB family KHU1_2204 PF01418 Helix-turn-helix domain, rpiR family KHU1_2204 PF01380 SIS domain KHU1_2205 PF01238 Phosphomannose isomerase type I KHU1_2206 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KHU1_2206 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KHU1_2206 PF02378 Phosphotransferase system, EIIC KHU1_2207 PF05043 Mga helix-turn-helix domain KHU1_2207 PF00874 PRD domain KHU1_2207 PF08279 HTH domain KHU1_2207 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KHU1_2208 PF12706 Beta-lactamase superfamily domain KHU1_2209 PF04073 Aminoacyl-tRNA editing domain KHU1_2210 PF03466 LysR substrate binding domain KHU1_2210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_2211 PF07690 Major Facilitator Superfamily KHU1_2212 PF00667 FAD binding domain KHU1_2212 PF00175 Oxidoreductase NAD-binding domain KHU1_2212 PF00258 Flavodoxin KHU1_2212 PF00067 Cytochrome P450 KHU1_2213 PF00440 Bacterial regulatory proteins, tetR family KHU1_2213 PF16295 Tetracyclin repressor-like, C-terminal domain KHU1_2214 PF08241 Methyltransferase domain KHU1_2216 PF01226 Formate/nitrite transporter KHU1_2217 PF10057 Uncharacterized conserved protein (DUF2294) KHU1_2218 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KHU1_2218 PF00037 4Fe-4S binding domain KHU1_2218 PF00384 Molybdopterin oxidoreductase KHU1_2218 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KHU1_2218 PF01568 Molydopterin dinucleotide binding domain KHU1_2219 PF07849 Protein of unknown function (DUF1641) KHU1_2220 PF14143 YrhC-like protein KHU1_2221 PF01053 Cys/Met metabolism PLP-dependent enzyme KHU1_2222 PF00291 Pyridoxal-phosphate dependent enzyme KHU1_2223 PF01048 Phosphorylase superfamily KHU1_2224 PF13649 Methyltransferase domain KHU1_2225 PF10750 Protein of unknown function (DUF2536) KHU1_2226 PF07423 Domain of unknown function (DUF1510) KHU1_2227 PF00905 Penicillin binding protein transpeptidase domain KHU1_2227 PF03717 Penicillin-binding Protein dimerisation domain KHU1_2228 PF03449 Transcription elongation factor, N-terminal KHU1_2228 PF01272 Transcription elongation factor, GreA/GreB, C-term KHU1_2229 PF00485 Phosphoribulokinase / Uridine kinase family KHU1_2233 PF02618 YceG-like family KHU1_2234 PF06949 Protein of unknown function (DUF1292) KHU1_2235 PF03652 Holliday junction resolvase KHU1_2236 PF06135 IreB regulatory phosphoprotein KHU1_2237 PF02272 DHHA1 domain KHU1_2237 PF01411 tRNA synthetases class II (A) KHU1_2237 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KHU1_2238 PF01594 AI-2E family transporter KHU1_2239 PF00005 ABC transporter KHU1_2240 PF00497 Bacterial extracellular solute-binding proteins, family 3 KHU1_2241 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2242 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2244 PF05239 PRC-barrel domain KHU1_2245 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KHU1_2245 PF14490 Helix-hairpin-helix containing domain KHU1_2245 PF13538 UvrD-like helicase C-terminal domain KHU1_2246 PF07719 Tetratricopeptide repeat KHU1_2246 PF13181 Tetratricopeptide repeat KHU1_2248 PF00266 Aminotransferase class-V KHU1_2249 PF02082 Transcriptional regulator KHU1_2250 PF16193 AAA C-terminal domain KHU1_2250 PF12002 MgsA AAA+ ATPase C terminal KHU1_2250 PF05496 Holliday junction DNA helicase RuvB P-loop domain KHU1_2251 PF00899 ThiF family KHU1_2252 PF01336 OB-fold nucleic acid binding domain KHU1_2252 PF02938 GAD domain KHU1_2252 PF00152 tRNA synthetases class II (D, K and N) KHU1_2253 PF03129 Anticodon binding domain KHU1_2253 PF13393 Histidyl-tRNA synthetase KHU1_2254 PF01520 N-acetylmuramoyl-L-alanine amidase KHU1_2254 PF08239 Bacterial SH3 domain KHU1_2255 PF02580 D-Tyr-tRNA(Tyr) deacylase KHU1_2256 PF04607 Region found in RelA / SpoT proteins KHU1_2256 PF13291 ACT domain KHU1_2256 PF02824 TGS domain KHU1_2257 PF00156 Phosphoribosyl transferase domain KHU1_2259 PF06305 Lipopolysaccharide assembly protein A domain KHU1_2260 PF02080 TrkA-C domain KHU1_2261 PF07549 SecD/SecF GG Motif KHU1_2261 PF02355 Protein export membrane protein KHU1_2262 PF13797 Post-transcriptional regulator KHU1_2263 PF01943 Polysaccharide biosynthesis protein KHU1_2263 PF14667 Polysaccharide biosynthesis C-terminal domain KHU1_2264 PF04239 Protein of unknown function (DUF421) KHU1_2265 PF12670 Protein of unknown function (DUF3792) KHU1_2266 PF02699 Preprotein translocase subunit KHU1_2267 PF01702 Queuine tRNA-ribosyltransferase KHU1_2268 PF02547 Queuosine biosynthesis protein KHU1_2269 PF11146 Protein of unknown function (DUF2905) KHU1_2270 PF05496 Holliday junction DNA helicase RuvB P-loop domain KHU1_2270 PF05491 RuvB C-terminal winged helix domain KHU1_2270 PF17864 RuvB AAA lid domain KHU1_2271 PF07499 RuvA, C-terminal domain KHU1_2271 PF01330 RuvA N terminal domain KHU1_2272 PF08955 BofC C-terminal domain KHU1_2272 PF08977 Bypass of Forespore C, N terminal KHU1_2273 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KHU1_2274 PF01476 LysM domain KHU1_2275 PF02445 Quinolinate synthetase A protein KHU1_2276 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KHU1_2276 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KHU1_2277 PF02910 Fumarate reductase flavoprotein C-term KHU1_2277 PF00890 FAD binding domain KHU1_2278 PF00266 Aminotransferase class-V KHU1_2279 PF08279 HTH domain KHU1_2279 PF02829 3H domain KHU1_2280 PF00800 Prephenate dehydratase KHU1_2280 PF01842 ACT domain KHU1_2281 PF01842 ACT domain KHU1_2282 PF01926 50S ribosome-binding GTPase KHU1_2282 PF01018 GTP1/OBG KHU1_2282 PF09269 Domain of unknown function (DUF1967) KHU1_2283 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KHU1_2283 PF14682 Sporulation initiation phospho-transferase B, C-terminal KHU1_2284 PF01016 Ribosomal L27 protein KHU1_2285 PF04327 Cysteine protease Prp KHU1_2286 PF00829 Ribosomal prokaryotic L21 protein KHU1_2287 PF02163 Peptidase family M50 KHU1_2288 PF01551 Peptidase family M23 KHU1_2289 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KHU1_2290 PF03775 Septum formation inhibitor MinC, C-terminal domain KHU1_2291 PF04093 rod shape-determining protein MreD KHU1_2292 PF04085 rod shape-determining protein MreC KHU1_2294 PF04002 RadC-like JAB domain KHU1_2295 PF02545 Maf-like protein KHU1_2297 PF06750 Bacterial Peptidase A24 N-terminal domain KHU1_2297 PF01478 Type IV leader peptidase family KHU1_2298 PF02875 Mur ligase family, glutamate ligase domain KHU1_2298 PF08245 Mur ligase middle domain KHU1_2299 PF10458 Valyl tRNA synthetase tRNA binding arm KHU1_2299 PF08264 Anticodon-binding domain of tRNA KHU1_2299 PF00133 tRNA synthetases class I (I, L, M and V) KHU1_2302 PF01476 LysM domain KHU1_2303 PF00202 Aminotransferase class-III KHU1_2304 PF00490 Delta-aminolevulinic acid dehydratase KHU1_2305 PF02602 Uroporphyrinogen-III synthase HemD KHU1_2306 PF03900 Porphobilinogen deaminase, C-terminal domain KHU1_2306 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KHU1_2307 PF01578 Cytochrome C assembly protein KHU1_2308 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KHU1_2308 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KHU1_2308 PF01488 Shikimate / quinate 5-dehydrogenase KHU1_2310 PF01926 50S ribosome-binding GTPase KHU1_2311 PF02190 ATP-dependent protease La (LON) substrate-binding domain KHU1_2311 PF05362 Lon protease (S16) C-terminal proteolytic domain KHU1_2311 PF00004 ATPase family associated with various cellular activities (AAA) KHU1_2312 PF05362 Lon protease (S16) C-terminal proteolytic domain KHU1_2312 PF00004 ATPase family associated with various cellular activities (AAA) KHU1_2313 PF07724 AAA domain (Cdc48 subfamily) KHU1_2313 PF10431 C-terminal, D2-small domain, of ClpB protein KHU1_2313 PF06689 ClpX C4-type zinc finger KHU1_2314 PF05698 Bacterial trigger factor protein (TF) C-terminus KHU1_2314 PF05697 Bacterial trigger factor protein (TF) KHU1_2314 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KHU1_2316 PF00694 Aconitase C-terminal domain KHU1_2317 PF00330 Aconitase family (aconitate hydratase) KHU1_2318 PF00180 Isocitrate/isopropylmalate dehydrogenase KHU1_2320 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KHU1_2320 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KHU1_2321 PF01842 ACT domain KHU1_2321 PF10369 Small subunit of acetolactate synthase KHU1_2322 PF00205 Thiamine pyrophosphate enzyme, central domain KHU1_2322 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KHU1_2322 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KHU1_2325 PF12850 Calcineurin-like phosphoesterase superfamily domain KHU1_2326 PF01725 Ham1 family KHU1_2327 PF03725 3' exoribonuclease family, domain 2 KHU1_2327 PF01138 3' exoribonuclease family, domain 1 KHU1_2328 PF10646 Sporulation and spore germination KHU1_2329 PF01177 Asp/Glu/Hydantoin racemase KHU1_2330 PF01047 MarR family KHU1_2331 PF00196 Bacterial regulatory proteins, luxR family KHU1_2332 PF03061 Thioesterase superfamily KHU1_2333 PF13183 4Fe-4S dicluster domain KHU1_2333 PF13085 2Fe-2S iron-sulfur cluster binding domain KHU1_2334 PF00890 FAD binding domain KHU1_2334 PF02910 Fumarate reductase flavoprotein C-term KHU1_2335 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KHU1_2336 PF10702 Protein of unknown function (DUF2507) KHU1_2337 PF01842 ACT domain KHU1_2337 PF00696 Amino acid kinase family KHU1_2337 PF13840 ACT domain KHU1_2338 PF02151 UvrB/uvrC motif KHU1_2338 PF01541 GIY-YIG catalytic domain KHU1_2338 PF08459 UvrC Helix-hairpin-helix N-terminal KHU1_2339 PF00085 Thioredoxin KHU1_2340 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KHU1_2341 PF00766 Electron transfer flavoprotein FAD-binding domain KHU1_2341 PF01012 Electron transfer flavoprotein domain KHU1_2342 PF01012 Electron transfer flavoprotein domain KHU1_2343 PF00378 Enoyl-CoA hydratase/isomerase KHU1_2344 PF00440 Bacterial regulatory proteins, tetR family KHU1_2344 PF08359 YsiA-like protein, C-terminal region KHU1_2345 PF13193 AMP-binding enzyme C-terminal domain KHU1_2345 PF00501 AMP-binding enzyme KHU1_2346 PF10924 Protein of unknown function (DUF2711) KHU1_2347 PF03994 Domain of Unknown Function (DUF350) KHU1_2348 PF00488 MutS domain V KHU1_2348 PF01713 Smr domain KHU1_2349 PF14716 Helix-hairpin-helix domain KHU1_2349 PF14791 DNA polymerase beta thumb KHU1_2349 PF02811 PHP domain KHU1_2350 PF02674 Colicin V production protein KHU1_2351 PF05164 Cell division protein ZapA KHU1_2352 PF01351 Ribonuclease HII KHU1_2352 PF11858 Domain of unknown function (DUF3378) KHU1_2353 PF03484 tRNA synthetase B5 domain KHU1_2353 PF03147 Ferredoxin-fold anticodon binding domain KHU1_2353 PF01588 Putative tRNA binding domain KHU1_2353 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KHU1_2353 PF03483 B3/4 domain KHU1_2354 PF01409 tRNA synthetases class II core domain (F) KHU1_2354 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KHU1_2355 PF00588 SpoU rRNA Methylase family KHU1_2355 PF08032 RNA 2'-O ribose methyltransferase substrate binding KHU1_2356 PF14098 Small, acid-soluble spore protein I KHU1_2357 PF13556 PucR C-terminal helix-turn-helix domain KHU1_2357 PF05651 Putative sugar diacid recognition KHU1_2357 PF17853 GGDEF-like domain KHU1_2358 PF02913 FAD linked oxidases, C-terminal domain KHU1_2358 PF01565 FAD binding domain KHU1_2359 PF13183 4Fe-4S dicluster domain KHU1_2359 PF02754 Cysteine-rich domain KHU1_2360 PF13722 5TM C-terminal transporter carbon starvation CstA KHU1_2360 PF02554 Carbon starvation protein CstA KHU1_2361 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KHU1_2362 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2363 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2364 PF01547 Bacterial extracellular solute-binding protein KHU1_2365 PF13685 Iron-containing alcohol dehydrogenase KHU1_2366 PF13344 Haloacid dehalogenase-like hydrolase KHU1_2367 PF00596 Class II Aldolase and Adducin N-terminal domain KHU1_2368 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KHU1_2368 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KHU1_2369 PF02610 L-arabinose isomerase KHU1_2369 PF11762 L-arabinose isomerase C-terminal domain KHU1_2370 PF04616 Glycosyl hydrolases family 43 KHU1_2371 PF05343 M42 glutamyl aminopeptidase KHU1_2373 PF06961 Protein of unknown function (DUF1294) KHU1_2374 PF00453 Ribosomal protein L20 KHU1_2375 PF01632 Ribosomal protein L35 KHU1_2376 PF00707 Translation initiation factor IF-3, C-terminal domain KHU1_2376 PF05198 Translation initiation factor IF-3, N-terminal domain KHU1_2377 PF04172 LrgB-like family KHU1_2378 PF03788 LrgA family KHU1_2379 PF00072 Response regulator receiver domain KHU1_2379 PF04397 LytTr DNA-binding domain KHU1_2380 PF06580 Histidine kinase KHU1_2380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_2380 PF07694 5TMR of 5TMR-LYT KHU1_2382 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KHU1_2382 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KHU1_2382 PF03129 Anticodon binding domain KHU1_2382 PF02824 TGS domain KHU1_2383 PF08812 YtxC-like family KHU1_2384 PF09335 SNARE associated Golgi protein KHU1_2385 PF07319 Primosomal protein DnaI N-terminus KHU1_2385 PF01695 IstB-like ATP binding protein KHU1_2386 PF07261 Replication initiation and membrane attachment KHU1_2387 PF03477 ATP cone domain KHU1_2388 PF02675 S-adenosylmethionine decarboxylase KHU1_2389 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KHU1_2389 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KHU1_2390 PF01638 HxlR-like helix-turn-helix KHU1_2391 PF07690 Major Facilitator Superfamily KHU1_2392 PF00248 Aldo/keto reductase family KHU1_2393 PF01121 Dephospho-CoA kinase KHU1_2394 PF02659 Putative manganese efflux pump KHU1_2395 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KHU1_2395 PF06827 Zinc finger found in FPG and IleRS KHU1_2395 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KHU1_2396 PF00476 DNA polymerase family A KHU1_2396 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KHU1_2396 PF01367 5'-3' exonuclease, C-terminal SAM fold KHU1_2397 PF00512 His Kinase A (phospho-acceptor) domain KHU1_2397 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_2397 PF00989 PAS fold KHU1_2397 PF16736 Single Cache-like KHU1_2398 PF00072 Response regulator receiver domain KHU1_2398 PF00486 Transcriptional regulatory protein, C terminal KHU1_2399 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KHU1_2399 PF00056 lactate/malate dehydrogenase, NAD binding domain KHU1_2400 PF00180 Isocitrate/isopropylmalate dehydrogenase KHU1_2401 PF00285 Citrate synthase, C-terminal domain KHU1_2403 PF11208 Protein of unknown function (DUF2992) KHU1_2404 PF04284 Protein of unknown function (DUF441) KHU1_2405 PF01594 AI-2E family transporter KHU1_2406 PF04186 FxsA cytoplasmic membrane protein KHU1_2407 PF02887 Pyruvate kinase, alpha/beta domain KHU1_2407 PF00224 Pyruvate kinase, barrel domain KHU1_2407 PF00391 PEP-utilising enzyme, mobile domain KHU1_2408 PF00365 Phosphofructokinase KHU1_2409 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KHU1_2410 PF01039 Carboxyl transferase domain KHU1_2410 PF17848 Acetyl-coA carboxylase zinc finger domain KHU1_2412 PF03949 Malic enzyme, NAD binding domain KHU1_2412 PF00390 Malic enzyme, N-terminal domain KHU1_2413 PF07733 Bacterial DNA polymerase III alpha NTPase domain KHU1_2413 PF02811 PHP domain KHU1_2413 PF14579 Helix-hairpin-helix motif KHU1_2413 PF01336 OB-fold nucleic acid binding domain KHU1_2413 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KHU1_2414 PF14034 Sporulation protein YtrH KHU1_2417 PF02272 DHHA1 domain KHU1_2417 PF01368 DHH family KHU1_2418 PF14007 YtpI-like protein KHU1_2419 PF03061 Thioesterase superfamily KHU1_2419 PF00571 CBS domain KHU1_2419 PF00392 Bacterial regulatory proteins, gntR family KHU1_2419 PF07085 DRTGG domain KHU1_2422 PF00206 Lyase KHU1_2422 PF14698 Argininosuccinate lyase C-terminal KHU1_2423 PF00764 Arginosuccinate synthase KHU1_2424 PF00994 Probable molybdopterin binding domain KHU1_2425 PF00871 Acetokinase family KHU1_2426 PF02384 N-6 DNA Methylase KHU1_2427 PF08534 Redoxin KHU1_2428 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KHU1_2429 PF11167 Protein of unknown function (DUF2953) KHU1_2430 PF06271 RDD family KHU1_2431 PF01343 Peptidase family S49 KHU1_2432 PF01513 ATP-NAD kinase KHU1_2433 PF07969 Amidohydrolase family KHU1_2434 PF00501 AMP-binding enzyme KHU1_2434 PF13193 AMP-binding enzyme C-terminal domain KHU1_2435 PF00269 Small, acid-soluble spore proteins, alpha/beta type KHU1_2436 PF02568 Thiamine biosynthesis protein (ThiI) KHU1_2436 PF02926 THUMP domain KHU1_2437 PF00266 Aminotransferase class-V KHU1_2438 PF05525 Branched-chain amino acid transport protein KHU1_2439 PF06160 Septation ring formation regulator, EzrA KHU1_2440 PF02811 PHP domain KHU1_2441 PF00440 Bacterial regulatory proteins, tetR family KHU1_2442 PF13185 GAF domain KHU1_2443 PF00990 Diguanylate cyclase, GGDEF domain KHU1_2445 PF00163 Ribosomal protein S4/S9 N-terminal domain KHU1_2445 PF01479 S4 domain KHU1_2446 PF00171 Aldehyde dehydrogenase family KHU1_2447 PF09346 SMI1 / KNR4 family (SUKH-1) KHU1_2451 PF00970 Oxidoreductase FAD-binding domain KHU1_2451 PF00042 Globin KHU1_2451 PF00175 Oxidoreductase NAD-binding domain KHU1_2453 PF01965 DJ-1/PfpI family KHU1_2456 PF16916 Dimerisation domain of Zinc Transporter KHU1_2456 PF01545 Cation efflux family KHU1_2457 PF11495 Archaeal transcriptional regulator TrmB KHU1_2457 PF01978 Sugar-specific transcriptional regulator TrmB KHU1_2460 PF00579 tRNA synthetases class I (W and Y) KHU1_2460 PF01479 S4 domain KHU1_2461 PF13193 AMP-binding enzyme C-terminal domain KHU1_2461 PF00501 AMP-binding enzyme KHU1_2462 PF00583 Acetyltransferase (GNAT) family KHU1_2463 PF00571 CBS domain KHU1_2464 PF00850 Histone deacetylase domain KHU1_2465 PF13677 Membrane MotB of proton-channel complex MotA/MotB KHU1_2465 PF00691 OmpA family KHU1_2466 PF01618 MotA/TolQ/ExbB proton channel family KHU1_2467 PF00356 Bacterial regulatory proteins, lacI family KHU1_2468 PF00793 DAHP synthetase I family KHU1_2468 PF01817 Chorismate mutase type II KHU1_2469 PF11009 Protein of unknown function (DUF2847) KHU1_2470 PF12732 YtxH-like protein KHU1_2471 PF06103 Bacterial protein of unknown function (DUF948) KHU1_2472 PF08245 Mur ligase middle domain KHU1_2472 PF02875 Mur ligase family, glutamate ligase domain KHU1_2472 PF01225 Mur ligase family, catalytic domain KHU1_2473 PF09397 Ftsk gamma domain KHU1_2473 PF01580 FtsK/SpoIIIE family KHU1_2473 PF17854 FtsK alpha domain KHU1_2474 PF01588 Putative tRNA binding domain KHU1_2474 PF14794 Domain of unknown function (DUF4479) KHU1_2475 PF07285 Protein of unknown function (DUF1444) KHU1_2476 PF00085 Thioredoxin KHU1_2477 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ KHU1_2478 PF05343 M42 glutamyl aminopeptidase KHU1_2479 PF03413 Peptidase propeptide and YPEB domain KHU1_2480 PF03949 Malic enzyme, NAD binding domain KHU1_2480 PF00390 Malic enzyme, N-terminal domain KHU1_2481 PF00753 Metallo-beta-lactamase superfamily KHU1_2482 PF02390 Putative methyltransferase KHU1_2483 PF14165 YtzH-like protein KHU1_2484 PF01636 Phosphotransferase enzyme family KHU1_2485 PF00781 Diacylglycerol kinase catalytic domain KHU1_2488 PF00291 Pyridoxal-phosphate dependent enzyme KHU1_2489 PF01546 Peptidase family M20/M25/M40 KHU1_2490 PF00860 Permease family KHU1_2491 PF05975 Bacterial ABC transporter protein EcsB KHU1_2492 PF00005 ABC transporter KHU1_2493 PF08220 DeoR-like helix-turn-helix domain KHU1_2494 PF00849 RNA pseudouridylate synthase KHU1_2494 PF01479 S4 domain KHU1_2495 PF14667 Polysaccharide biosynthesis C-terminal domain KHU1_2495 PF01943 Polysaccharide biosynthesis protein KHU1_2497 PF02028 BCCT, betaine/carnitine/choline family transporter KHU1_2499 PF00665 Integrase core domain KHU1_2499 PF13333 Integrase core domain KHU1_2499 PF13276 HTH-like domain KHU1_2500 PF10957 Sporulation protein Cse60 KHU1_2505 PF11975 Family 4 glycosyl hydrolase C-terminal domain KHU1_2505 PF02056 Family 4 glycosyl hydrolase KHU1_2507 PF00581 Rhodanese-like domain KHU1_2508 PF08264 Anticodon-binding domain of tRNA KHU1_2508 PF00133 tRNA synthetases class I (I, L, M and V) KHU1_2508 PF13603 Leucyl-tRNA synthetase, Domain 2 KHU1_2508 PF09334 tRNA synthetases class I (M) KHU1_2509 PF14074 Protein of unknown function (DUF4257) KHU1_2510 PF01740 STAS domain KHU1_2510 PF13426 PAS domain KHU1_2511 PF07690 Major Facilitator Superfamily KHU1_2512 PF09529 Integral membrane protein (intg_mem_TP0381) KHU1_2513 PF02687 FtsX-like permease family KHU1_2514 PF00005 ABC transporter KHU1_2515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_2516 PF00486 Transcriptional regulatory protein, C terminal KHU1_2516 PF00072 Response regulator receiver domain KHU1_2517 PF12704 MacB-like periplasmic core domain KHU1_2517 PF02687 FtsX-like permease family KHU1_2518 PF00005 ABC transporter KHU1_2522 PF00005 ABC transporter KHU1_2523 PF00392 Bacterial regulatory proteins, gntR family KHU1_2524 PF10732 Protein of unknown function (DUF2524) KHU1_2525 PF16199 Radical_SAM C-terminal domain KHU1_2525 PF04055 Radical SAM superfamily KHU1_2526 PF06962 Putative rRNA methylase KHU1_2528 PF03009 Glycerophosphoryl diester phosphodiesterase family KHU1_2529 PF10776 Protein of unknown function (DUF2600) KHU1_2530 PF12146 Serine aminopeptidase, S33 KHU1_2531 PF00132 Bacterial transferase hexapeptide (six repeats) KHU1_2532 PF00324 Amino acid permease KHU1_2533 PF13537 Glutamine amidotransferase domain KHU1_2533 PF00733 Asparagine synthase KHU1_2534 PF00438 S-adenosylmethionine synthetase, N-terminal domain KHU1_2534 PF02772 S-adenosylmethionine synthetase, central domain KHU1_2534 PF02773 S-adenosylmethionine synthetase, C-terminal domain KHU1_2535 PF01293 Phosphoenolpyruvate carboxykinase KHU1_2536 PF10763 Protein of unknown function (DUF2584) KHU1_2537 PF00326 Prolyl oligopeptidase family KHU1_2539 PF00005 ABC transporter KHU1_2540 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2541 PF00293 NUDIX domain KHU1_2542 PF05105 Bacteriophage holin family KHU1_2543 PF00210 Ferritin-like domain KHU1_2544 PF13115 YtkA-like KHU1_2545 PF02664 S-Ribosylhomocysteinase (LuxS) KHU1_2546 PF01809 Putative membrane protein insertion efficiency factor KHU1_2547 PF00484 Carbonic anhydrase KHU1_2548 PF01197 Ribosomal protein L31 KHU1_2549 PF01654 Cytochrome bd terminal oxidase subunit I KHU1_2550 PF02322 Cytochrome bd terminal oxidase subunit II KHU1_2551 PF07561 Domain of Unknown Function (DUF1540) KHU1_2552 PF00950 ABC 3 transport family KHU1_2553 PF13378 Enolase C-terminal domain-like KHU1_2553 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KHU1_2554 PF13193 AMP-binding enzyme C-terminal domain KHU1_2554 PF00501 AMP-binding enzyme KHU1_2555 PF00378 Enoyl-CoA hydratase/isomerase KHU1_2556 PF00561 alpha/beta hydrolase fold KHU1_2557 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KHU1_2557 PF16582 Middle domain of thiamine pyrophosphate KHU1_2557 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KHU1_2558 PF00425 chorismate binding enzyme KHU1_2559 PF01258 Prokaryotic dksA/traR C4-type zinc finger KHU1_2560 PF03073 TspO/MBR family KHU1_2561 PF09515 Thiamine transporter protein (Thia_YuaJ) KHU1_2562 PF15975 Flotillin KHU1_2562 PF01145 SPFH domain / Band 7 family KHU1_2564 PF12867 DinB superfamily KHU1_2566 PF00465 Iron-containing alcohol dehydrogenase KHU1_2569 PF17735 Biofilm surface layer A KHU1_2570 PF02254 TrkA-N domain KHU1_2570 PF02080 TrkA-C domain KHU1_2571 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KHU1_2571 PF13457 GW (Gly-Tryp) dipeptide domain KHU1_2572 PF00175 Oxidoreductase NAD-binding domain KHU1_2572 PF00042 Globin KHU1_2572 PF00970 Oxidoreductase FAD-binding domain KHU1_2575 PF02673 Bacitracin resistance protein BacA KHU1_2576 PF01594 AI-2E family transporter KHU1_2577 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KHU1_2577 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KHU1_2578 PF01965 DJ-1/PfpI family KHU1_2579 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHU1_2579 PF02743 Cache domain KHU1_2579 PF00672 HAMP domain KHU1_2580 PF02743 Cache domain KHU1_2580 PF00672 HAMP domain KHU1_2580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHU1_2581 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHU1_2581 PF00672 HAMP domain KHU1_2581 PF02743 Cache domain KHU1_2582 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHU1_2582 PF02743 Cache domain KHU1_2582 PF00672 HAMP domain KHU1_2585 PF03060 Nitronate monooxygenase KHU1_2586 PF01894 Uncharacterised protein family UPF0047 KHU1_2587 PF00128 Alpha amylase, catalytic domain KHU1_2587 PF16657 Maltogenic Amylase, C-terminal domain KHU1_2588 PF00571 CBS domain KHU1_2588 PF03471 Transporter associated domain KHU1_2588 PF01595 Cyclin M transmembrane N-terminal domain KHU1_2589 PF04298 Putative neutral zinc metallopeptidase KHU1_2591 PF11458 Membrane-integrating protein Mistic KHU1_2592 PF07885 Ion channel KHU1_2592 PF02254 TrkA-N domain KHU1_2593 PF08868 YugN-like family KHU1_2595 PF00342 Phosphoglucose isomerase KHU1_2597 PF03358 NADPH-dependent FMN reductase KHU1_2598 PF00857 Isochorismatase family KHU1_2599 PF00465 Iron-containing alcohol dehydrogenase KHU1_2600 PF00465 Iron-containing alcohol dehydrogenase KHU1_2601 PF04070 Domain of unknown function (DUF378) KHU1_2602 PF00575 S1 RNA binding domain KHU1_2603 PF00155 Aminotransferase class I and II KHU1_2604 PF01037 Lrp/AsnC ligand binding domain KHU1_2605 PF00561 alpha/beta hydrolase fold KHU1_2605 PF08386 TAP-like protein KHU1_2606 PF08958 Domain of unknown function (DUF1871) KHU1_2607 PF00155 Aminotransferase class I and II KHU1_2608 PF00512 His Kinase A (phospho-acceptor) domain KHU1_2608 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_2609 PF08810 Kinase associated protein B KHU1_2610 PF00929 Exonuclease KHU1_2611 PF07690 Major Facilitator Superfamily KHU1_2612 PF00905 Penicillin binding protein transpeptidase domain KHU1_2612 PF00912 Transglycosylase KHU1_2613 PF04134 Protein of unknown function, DUF393 KHU1_2614 PF17328 Family of unknown function (DUF5366) KHU1_2615 PF17203 Single cache domain 3 KHU1_2615 PF00989 PAS fold KHU1_2615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_2615 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KHU1_2616 PF00072 Response regulator receiver domain KHU1_2622 PF13244 Domain of unknown function (DUF4040) KHU1_2622 PF00361 Proton-conducting membrane transporter KHU1_2622 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KHU1_2623 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KHU1_2624 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KHU1_2625 PF00361 Proton-conducting membrane transporter KHU1_2626 PF01899 Na+/H+ ion antiporter subunit KHU1_2627 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KHU1_2628 PF03334 Na+/H+ antiporter subunit KHU1_2629 PF03061 Thioesterase superfamily KHU1_2630 PF00072 Response regulator receiver domain KHU1_2630 PF00196 Bacterial regulatory proteins, luxR family KHU1_2631 PF07730 Histidine kinase KHU1_2631 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_2632 PF05952 Bacillus competence pheromone ComX KHU1_2633 PF00348 Polyprenyl synthetase KHU1_2634 PF08181 DegQ (SacQ) family KHU1_2636 PF08668 HDOD domain KHU1_2636 PF00563 EAL domain KHU1_2637 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KHU1_2637 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KHU1_2637 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KHU1_2638 PF00857 Isochorismatase family KHU1_2639 PF07997 Protein of unknown function (DUF1694) KHU1_2640 PF14166 YueH-like protein KHU1_2641 PF10676 Spore germination protein gerPA/gerPF KHU1_2642 PF01594 AI-2E family transporter KHU1_2643 PF10842 Protein of unknown function (DUF2642) KHU1_2644 PF01966 HD domain KHU1_2645 PF00106 short chain dehydrogenase KHU1_2646 PF17355 Family of unknown function (DUF5383) KHU1_2648 PF12538 DNA transporter KHU1_2648 PF01580 FtsK/SpoIIIE family KHU1_2649 PF10140 WXG100 protein secretion system (Wss), protein YukC KHU1_2650 PF08817 WXG100 protein secretion system (Wss), protein YukD KHU1_2651 PF06013 Proteins of 100 residues with WXG KHU1_2652 PF06018 CodY GAF-like domain KHU1_2652 PF17853 GGDEF-like domain KHU1_2652 PF13556 PucR C-terminal helix-turn-helix domain KHU1_2653 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KHU1_2653 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KHU1_2654 PF10042 Uncharacterized conserved protein (DUF2278) KHU1_2655 PF03621 MbtH-like protein KHU1_2656 PF00501 AMP-binding enzyme KHU1_2656 PF00668 Condensation domain KHU1_2656 PF00550 Phosphopantetheine attachment site KHU1_2656 PF00975 Thioesterase domain KHU1_2656 PF13193 AMP-binding enzyme C-terminal domain KHU1_2657 PF00857 Isochorismatase family KHU1_2657 PF00550 Phosphopantetheine attachment site KHU1_2658 PF00501 AMP-binding enzyme KHU1_2658 PF13193 AMP-binding enzyme C-terminal domain KHU1_2659 PF00425 chorismate binding enzyme KHU1_2660 PF00106 short chain dehydrogenase KHU1_2661 PF00756 Putative esterase KHU1_2662 PF00174 Oxidoreductase molybdopterin binding domain KHU1_2663 PF02632 BioY family KHU1_2664 PF03553 Na+/H+ antiporter family KHU1_2664 PF13726 Na+-H+ antiporter family KHU1_2665 PF02789 Cytosol aminopeptidase family, N-terminal domain KHU1_2665 PF00883 Cytosol aminopeptidase family, catalytic domain KHU1_2666 PF02681 Divergent PAP2 family KHU1_2667 PF00665 Integrase core domain KHU1_2667 PF13333 Integrase core domain KHU1_2667 PF13276 HTH-like domain KHU1_2669 PF06725 3D domain KHU1_2670 PF14068 Putative membrane protein KHU1_2671 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHU1_2673 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHU1_2674 PF00478 IMP dehydrogenase / GMP reductase domain KHU1_2677 PF00005 ABC transporter KHU1_2681 PF13302 Acetyltransferase (GNAT) domain KHU1_2682 PF00106 short chain dehydrogenase KHU1_2683 PF01521 Iron-sulphur cluster biosynthesis KHU1_2684 PF01678 Diaminopimelate epimerase KHU1_2685 PF07662 Na+ dependent nucleoside transporter C-terminus KHU1_2685 PF01773 Na+ dependent nucleoside transporter N-terminus KHU1_2686 PF07293 Protein of unknown function (DUF1450) KHU1_2687 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHU1_2688 PF07315 Protein of unknown function (DUF1462) KHU1_2689 PF01106 NifU-like domain KHU1_2690 PF00326 Prolyl oligopeptidase family KHU1_2690 PF07676 WD40-like Beta Propeller Repeat KHU1_2691 PF08544 GHMP kinases C terminal KHU1_2691 PF00288 GHMP kinases N terminal domain KHU1_2692 PF00291 Pyridoxal-phosphate dependent enzyme KHU1_2693 PF03447 Homoserine dehydrogenase, NAD binding domain KHU1_2693 PF00742 Homoserine dehydrogenase KHU1_2693 PF01842 ACT domain KHU1_2695 PF04608 Phosphatidylglycerophosphatase A KHU1_2696 PF13344 Haloacid dehalogenase-like hydrolase KHU1_2697 PF01934 Protein of unknown function DUF86 KHU1_2698 PF06265 Protein of unknown function (DUF1027) KHU1_2699 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KHU1_2699 PF04055 Radical SAM superfamily KHU1_2700 PF01551 Peptidase family M23 KHU1_2701 PF09560 Sporulation protein YunB (Spo_YunB) KHU1_2702 PF02872 5'-nucleotidase, C-terminal domain KHU1_2703 PF01925 Sulfite exporter TauE/SafE KHU1_2704 PF01904 Protein of unknown function DUF72 KHU1_2706 PF01979 Amidohydrolase family KHU1_2707 PF07905 Purine catabolism regulatory protein-like family KHU1_2707 PF13556 PucR C-terminal helix-turn-helix domain KHU1_2707 PF17853 GGDEF-like domain KHU1_2710 PF07690 Major Facilitator Superfamily KHU1_2711 PF00266 Aminotransferase class-V KHU1_2712 PF01546 Peptidase family M20/M25/M40 KHU1_2713 PF04231 Endonuclease I KHU1_2714 PF17912 MalK OB fold domain KHU1_2714 PF00005 ABC transporter KHU1_2714 PF03459 TOBE domain KHU1_2715 PF00392 Bacterial regulatory proteins, gntR family KHU1_2715 PF07702 UTRA domain KHU1_2716 PF00294 pfkB family carbohydrate kinase KHU1_2717 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2718 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2719 PF01547 Bacterial extracellular solute-binding protein KHU1_2720 PF01380 SIS domain KHU1_2721 PF13411 MerR HTH family regulatory protein KHU1_2724 PF17418 Sporulation delaying protein SdpA KHU1_2725 PF07853 Protein of unknown function (DUF1648) KHU1_2726 PF01541 GIY-YIG catalytic domain KHU1_2727 PF01266 FAD dependent oxidoreductase KHU1_2728 PF01209 ubiE/COQ5 methyltransferase family KHU1_2729 PF10903 Protein of unknown function (DUF2691) KHU1_2730 PF01374 Glycosyl hydrolase family 46 KHU1_2731 PF01458 Uncharacterized protein family (UPF0051) KHU1_2732 PF01592 NifU-like N terminal domain KHU1_2733 PF00266 Aminotransferase class-V KHU1_2734 PF01458 Uncharacterized protein family (UPF0051) KHU1_2735 PF00005 ABC transporter KHU1_2736 PF02627 Carboxymuconolactone decarboxylase family KHU1_2737 PF03180 NLPA lipoprotein KHU1_2738 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2739 PF00005 ABC transporter KHU1_2739 PF09383 NIL domain KHU1_2740 PF02036 SCP-2 sterol transfer family KHU1_2741 PF00085 Thioredoxin KHU1_2742 PF01751 Toprim domain KHU1_2743 PF10830 Protein of unknown function (DUF2553) KHU1_2744 PF01597 Glycine cleavage H-protein KHU1_2745 PF03960 ArsC family KHU1_2746 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KHU1_2746 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KHU1_2746 PF02770 Acyl-CoA dehydrogenase, middle domain KHU1_2747 PF00108 Thiolase, N-terminal domain KHU1_2747 PF02803 Thiolase, C-terminal domain KHU1_2748 PF00378 Enoyl-CoA hydratase/isomerase KHU1_2748 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KHU1_2748 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KHU1_2749 PF01619 Proline dehydrogenase KHU1_2751 PF07875 Coat F domain KHU1_2752 PF01047 MarR family KHU1_2753 PF07690 Major Facilitator Superfamily KHU1_2754 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_2754 PF03466 LysR substrate binding domain KHU1_2755 PF06314 Acetoacetate decarboxylase (ADC) KHU1_2757 PF10835 Protein of unknown function (DUF2573) KHU1_2758 PF00005 ABC transporter KHU1_2759 PF14039 YusW-like protein KHU1_2761 PF00106 short chain dehydrogenase KHU1_2762 PF00210 Ferritin-like domain KHU1_2763 PF13180 PDZ domain KHU1_2764 PF00072 Response regulator receiver domain KHU1_2764 PF00486 Transcriptional regulatory protein, C terminal KHU1_2765 PF00672 HAMP domain KHU1_2765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_2765 PF00512 His Kinase A (phospho-acceptor) domain KHU1_2766 PF00440 Bacterial regulatory proteins, tetR family KHU1_2767 PF10415 Fumarase C C-terminus KHU1_2767 PF00206 Lyase KHU1_2768 PF13113 Protein of unknown function (DUF3970) KHU1_2769 PF03323 Bacillus/Clostridium GerA spore germination protein KHU1_2770 PF03845 Spore germination protein KHU1_2771 PF05504 Spore germination B3/ GerAC like, C-terminal KHU1_2772 PF00072 Response regulator receiver domain KHU1_2772 PF00196 Bacterial regulatory proteins, luxR family KHU1_2773 PF00672 HAMP domain KHU1_2773 PF07730 Histidine kinase KHU1_2773 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_2774 PF09922 Cell wall-active antibiotics response 4TMS YvqF KHU1_2775 PF13349 Putative adhesin KHU1_2776 PF04012 PspA/IM30 family KHU1_2778 PF07690 Major Facilitator Superfamily KHU1_2779 PF01923 Cobalamin adenosyltransferase KHU1_2780 PF00005 ABC transporter KHU1_2781 PF01032 FecCD transport family KHU1_2782 PF01497 Periplasmic binding protein KHU1_2783 PF00106 short chain dehydrogenase KHU1_2784 PF08450 SMP-30/Gluconolactonase/LRE-like region KHU1_2785 PF00512 His Kinase A (phospho-acceptor) domain KHU1_2785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_2786 PF00072 Response regulator receiver domain KHU1_2786 PF00486 Transcriptional regulatory protein, C terminal KHU1_2788 PF04545 Sigma-70, region 4 KHU1_2789 PF00190 Cupin KHU1_2790 PF14184 Regulatory protein YrvL KHU1_2791 PF00005 ABC transporter KHU1_2792 PF01032 FecCD transport family KHU1_2794 PF01497 Periplasmic binding protein KHU1_2795 PF13520 Amino acid permease KHU1_2796 PF09575 Small spore protein J (Spore_SspJ) KHU1_2797 PF04307 LexA-binding, inner membrane-associated putative hydrolase KHU1_2798 PF00884 Sulfatase KHU1_2799 PF12728 Helix-turn-helix domain KHU1_2799 PF12727 PBP superfamily domain KHU1_2801 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2802 PF00196 Bacterial regulatory proteins, luxR family KHU1_2802 PF00072 Response regulator receiver domain KHU1_2803 PF07730 Histidine kinase KHU1_2803 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KHU1_2803 PF00672 HAMP domain KHU1_2803 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_2804 PF00005 ABC transporter KHU1_2807 PF00248 Aldo/keto reductase family KHU1_2809 PF00999 Sodium/hydrogen exchanger family KHU1_2811 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KHU1_2811 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KHU1_2812 PF00175 Oxidoreductase NAD-binding domain KHU1_2812 PF00667 FAD binding domain KHU1_2812 PF00258 Flavodoxin KHU1_2813 PF13538 UvrD-like helicase C-terminal domain KHU1_2814 PF03458 UPF0126 domain KHU1_2816 PF02600 Disulfide bond formation protein DsbB KHU1_2817 PF13462 Thioredoxin KHU1_2818 PF00403 Heavy-metal-associated domain KHU1_2819 PF00403 Heavy-metal-associated domain KHU1_2820 PF00403 Heavy-metal-associated domain KHU1_2821 PF02583 Metal-sensitive transcriptional repressor KHU1_2822 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KHU1_2822 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KHU1_2823 PF02525 Flavodoxin-like fold KHU1_2824 PF00296 Luciferase-like monooxygenase KHU1_2825 PF00462 Glutaredoxin KHU1_2826 PF00296 Luciferase-like monooxygenase KHU1_2827 PF00005 ABC transporter KHU1_2828 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2829 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2830 PF00497 Bacterial extracellular solute-binding proteins, family 3 KHU1_2831 PF00497 Bacterial extracellular solute-binding proteins, family 3 KHU1_2832 PF00583 Acetyltransferase (GNAT) family KHU1_2833 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_2833 PF03466 LysR substrate binding domain KHU1_2834 PF00106 short chain dehydrogenase KHU1_2835 PF01337 Barstar (barnase inhibitor) KHU1_2836 PF01668 SmpB protein KHU1_2837 PF17876 Cold shock domain KHU1_2837 PF08206 Ribonuclease B OB domain KHU1_2837 PF00773 RNB domain KHU1_2837 PF00575 S1 RNA binding domain KHU1_2838 PF12146 Serine aminopeptidase, S33 KHU1_2839 PF03840 Preprotein translocase SecG subunit KHU1_2840 PF01381 Helix-turn-helix KHU1_2843 PF01638 HxlR-like helix-turn-helix KHU1_2844 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_2844 PF00512 His Kinase A (phospho-acceptor) domain KHU1_2845 PF00486 Transcriptional regulatory protein, C terminal KHU1_2845 PF00072 Response regulator receiver domain KHU1_2848 PF00005 ABC transporter KHU1_2849 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2850 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KHU1_2851 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2852 PF00571 CBS domain KHU1_2852 PF00005 ABC transporter KHU1_2853 PF12802 MarR family KHU1_2854 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2855 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KHU1_2856 PF00528 Binding-protein-dependent transport system inner membrane component KHU1_2857 PF00005 ABC transporter KHU1_2857 PF00571 CBS domain KHU1_2858 PF12802 MarR family KHU1_2859 PF01914 MarC family integral membrane protein KHU1_2861 PF13240 zinc-ribbon domain KHU1_2862 PF00583 Acetyltransferase (GNAT) family KHU1_2865 PF02585 GlcNAc-PI de-N-acetylase KHU1_2868 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KHU1_2869 PF01370 NAD dependent epimerase/dehydratase family KHU1_2870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KHU1_2871 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KHU1_2871 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KHU1_2871 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KHU1_2872 PF02225 PA domain KHU1_2872 PF04389 Peptidase family M28 KHU1_2873 PF03952 Enolase, N-terminal domain KHU1_2873 PF00113 Enolase, C-terminal TIM barrel domain KHU1_2874 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KHU1_2874 PF01676 Metalloenzyme superfamily KHU1_2875 PF00121 Triosephosphate isomerase KHU1_2876 PF00162 Phosphoglycerate kinase KHU1_2878 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KHU1_2878 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KHU1_2879 PF04198 Putative sugar-binding domain KHU1_2880 PF00083 Sugar (and other) transporter KHU1_2881 PF00392 Bacterial regulatory proteins, gntR family KHU1_2882 PF00296 Luciferase-like monooxygenase KHU1_2884 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_2884 PF03466 LysR substrate binding domain KHU1_2885 PF00892 EamA-like transporter family KHU1_2886 PF00324 Amino acid permease KHU1_2887 PF01418 Helix-turn-helix domain, rpiR family KHU1_2887 PF01380 SIS domain KHU1_2888 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KHU1_2888 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KHU1_2889 PF02447 GntP family permease KHU1_2890 PF02589 LUD domain KHU1_2891 PF02589 LUD domain KHU1_2891 PF13183 4Fe-4S dicluster domain KHU1_2891 PF11870 Domain of unknown function (DUF3390) KHU1_2892 PF02754 Cysteine-rich domain KHU1_2893 PF00155 Aminotransferase class I and II KHU1_2894 PF07729 FCD domain KHU1_2894 PF00392 Bacterial regulatory proteins, gntR family KHU1_2895 PF02652 L-lactate permease KHU1_2896 PF04963 Sigma-54 factor, core binding domain KHU1_2896 PF00309 Sigma-54 factor, Activator interacting domain (AID) KHU1_2896 PF04552 Sigma-54, DNA binding domain KHU1_2897 PF09628 YvfG protein KHU1_2898 PF04230 Polysaccharide pyruvyl transferase KHU1_2899 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KHU1_2900 PF00132 Bacterial transferase hexapeptide (six repeats) KHU1_2900 PF17836 PglD N-terminal domain KHU1_2901 PF02397 Bacterial sugar transferase KHU1_2902 PF01943 Polysaccharide biosynthesis protein KHU1_2902 PF14667 Polysaccharide biosynthesis C-terminal domain KHU1_2903 PF00535 Glycosyl transferase family 2 KHU1_2904 PF04230 Polysaccharide pyruvyl transferase KHU1_2905 PF00535 Glycosyl transferase family 2 KHU1_2907 PF00534 Glycosyl transferases group 1 KHU1_2907 PF13439 Glycosyltransferase Family 4 KHU1_2908 PF00535 Glycosyl transferase family 2 KHU1_2909 PF13439 Glycosyltransferase Family 4 KHU1_2909 PF00534 Glycosyl transferases group 1 KHU1_2910 PF02719 Polysaccharide biosynthesis protein KHU1_2911 PF13614 AAA domain KHU1_2912 PF02706 Chain length determinant protein KHU1_2913 PF01381 Helix-turn-helix KHU1_2913 PF08671 Anti-repressor SinI KHU1_2914 PF00135 Carboxylesterase family KHU1_2916 PF01872 RibD C-terminal domain KHU1_2918 PF00583 Acetyltransferase (GNAT) family KHU1_2919 PF05870 Phenolic acid decarboxylase (PAD) KHU1_2926 PF00251 Glycosyl hydrolases family 32 N-terminal domain KHU1_2926 PF08244 Glycosyl hydrolases family 32 C terminal KHU1_2927 PF01306 LacY proton/sugar symporter KHU1_2928 PF00356 Bacterial regulatory proteins, lacI family KHU1_2929 PF00574 Clp protease KHU1_2930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_2930 PF03466 LysR substrate binding domain KHU1_2931 PF04303 PrpF protein KHU1_2932 PF00083 Sugar (and other) transporter KHU1_2933 PF03641 Possible lysine decarboxylase KHU1_2934 PF03819 MazG nucleotide pyrophosphohydrolase domain KHU1_2935 PF01740 STAS domain KHU1_2935 PF00916 Sulfate permease family KHU1_2936 PF00484 Carbonic anhydrase KHU1_2937 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KHU1_2937 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KHU1_2938 PF00545 ribonuclease KHU1_2939 PF00797 N-acetyltransferase KHU1_2940 PF00381 PTS HPr component phosphorylation site KHU1_2941 PF02650 WhiA C-terminal HTH domain KHU1_2941 PF14527 WhiA LAGLIDADG-like domain KHU1_2941 PF10298 WhiA N-terminal LAGLIDADG-like domain KHU1_2942 PF01933 Uncharacterised protein family UPF0052 KHU1_2943 PF03668 P-loop ATPase protein family KHU1_2944 PF00293 NUDIX domain KHU1_2945 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHU1_2946 PF00877 NlpC/P60 family KHU1_2948 PF18698 Histidine kinase sensor domain KHU1_2948 PF00512 His Kinase A (phospho-acceptor) domain KHU1_2948 PF00989 PAS fold KHU1_2948 PF00672 HAMP domain KHU1_2948 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_2949 PF00072 Response regulator receiver domain KHU1_2949 PF00486 Transcriptional regulatory protein, C terminal KHU1_2950 PF00005 ABC transporter KHU1_2950 PF00664 ABC transporter transmembrane region KHU1_2951 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KHU1_2951 PF01502 Phosphoribosyl-AMP cyclohydrolase KHU1_2952 PF00977 Histidine biosynthesis protein KHU1_2953 PF00977 Histidine biosynthesis protein KHU1_2954 PF00117 Glutamine amidotransferase class-I KHU1_2955 PF00475 Imidazoleglycerol-phosphate dehydratase KHU1_2956 PF00815 Histidinol dehydrogenase KHU1_2957 PF01634 ATP phosphoribosyltransferase KHU1_2958 PF13393 Histidyl-tRNA synthetase KHU1_2959 PF13529 Peptidase_C39 like family KHU1_2960 PF14602 Hexapeptide repeat of succinyl-transferase KHU1_2961 PF13419 Haloacid dehalogenase-like hydrolase KHU1_2962 PF01790 Prolipoprotein diacylglyceryl transferase KHU1_2963 PF02603 HPr Serine kinase N terminus KHU1_2963 PF07475 HPr Serine kinase C-terminal domain KHU1_2964 PF01979 Amidohydrolase family KHU1_2965 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KHU1_2967 PF00440 Bacterial regulatory proteins, tetR family KHU1_2968 PF00149 Calcineurin-like phosphoesterase KHU1_2969 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KHU1_2970 PF04024 PspC domain KHU1_2971 PF13349 Putative adhesin KHU1_2974 PF00005 ABC transporter KHU1_2974 PF17760 UvrA interaction domain KHU1_2974 PF17755 UvrA DNA-binding domain KHU1_2975 PF02151 UvrB/uvrC motif KHU1_2975 PF12344 Ultra-violet resistance protein B KHU1_2975 PF04851 Type III restriction enzyme, res subunit KHU1_2975 PF17757 UvrB interaction domain KHU1_2975 PF00271 Helicase conserved C-terminal domain KHU1_2976 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) KHU1_2977 PF00391 PEP-utilising enzyme, mobile domain KHU1_2977 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KHU1_2978 PF00440 Bacterial regulatory proteins, tetR family KHU1_2979 PF07690 Major Facilitator Superfamily KHU1_2980 PF00975 Thioesterase domain KHU1_2983 PF00664 ABC transporter transmembrane region KHU1_2983 PF00005 ABC transporter KHU1_2984 PF00975 Thioesterase domain KHU1_2984 PF00550 Phosphopantetheine attachment site KHU1_2984 PF00668 Condensation domain KHU1_2984 PF00501 AMP-binding enzyme KHU1_2984 PF13193 AMP-binding enzyme C-terminal domain KHU1_2985 PF00668 Condensation domain KHU1_2985 PF13193 AMP-binding enzyme C-terminal domain KHU1_2985 PF00550 Phosphopantetheine attachment site KHU1_2985 PF00501 AMP-binding enzyme KHU1_2987 PF17820 PDZ domain KHU1_2988 PF17423 Swarming motility protein KHU1_2989 PF17820 PDZ domain KHU1_2989 PF03572 Peptidase family S41 KHU1_2989 PF01471 Putative peptidoglycan binding domain KHU1_2990 PF13229 Right handed beta helix region KHU1_2991 PF18075 FtsX extracellular domain KHU1_2991 PF02687 FtsX-like permease family KHU1_2992 PF00005 ABC transporter KHU1_2993 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KHU1_2994 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHU1_2994 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHU1_2995 PF00472 RF-1 domain KHU1_2995 PF03462 PCRF domain KHU1_2996 PF02810 SEC-C motif KHU1_2996 PF07516 SecA Wing and Scaffold domain KHU1_2996 PF07517 SecA DEAD-like domain KHU1_2996 PF01043 SecA preprotein cross-linking domain KHU1_2997 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KHU1_2997 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KHU1_3000 PF02561 Flagellar protein FliS KHU1_3001 PF02465 Flagellar hook-associated protein 2 N-terminus KHU1_3001 PF07195 Flagellar hook-associated protein 2 C-terminus KHU1_3001 PF07196 Flagellin hook IN motif KHU1_3002 PF00700 Bacterial flagellin C-terminal helical region KHU1_3002 PF00669 Bacterial flagellin N-terminal helical region KHU1_3003 PF02599 Global regulator protein family KHU1_3004 PF02623 FliW protein KHU1_3006 PF00700 Bacterial flagellin C-terminal helical region KHU1_3006 PF00669 Bacterial flagellin N-terminal helical region KHU1_3007 PF00460 Flagella basal body rod protein KHU1_3007 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KHU1_3008 PF05130 FlgN protein KHU1_3009 PF04316 Anti-sigma-28 factor, FlgM KHU1_3012 PF10719 Late competence development protein ComFB KHU1_3013 PF04851 Type III restriction enzyme, res subunit KHU1_3013 PF00271 Helicase conserved C-terminal domain KHU1_3014 PF02645 Uncharacterised protein, DegV family COG1307 KHU1_3015 PF00196 Bacterial regulatory proteins, luxR family KHU1_3015 PF00072 Response regulator receiver domain KHU1_3016 PF05384 Sensor protein DegS KHU1_3016 PF07730 Histidine kinase KHU1_3016 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_3017 PF01205 Uncharacterized protein family UPF0029 KHU1_3017 PF09186 Domain of unknown function (DUF1949) KHU1_3018 PF03816 Cell envelope-related transcriptional attenuator domain KHU1_3019 PF00953 Glycosyl transferase family 4 KHU1_3021 PF00535 Glycosyl transferase family 2 KHU1_3022 PF02706 Chain length determinant protein KHU1_3023 PF04932 O-Antigen ligase KHU1_3024 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KHU1_3024 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KHU1_3024 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KHU1_3025 PF13439 Glycosyltransferase Family 4 KHU1_3025 PF00534 Glycosyl transferases group 1 KHU1_3026 PF14667 Polysaccharide biosynthesis C-terminal domain KHU1_3026 PF01943 Polysaccharide biosynthesis protein KHU1_3027 PF02397 Bacterial sugar transferase KHU1_3028 PF01520 N-acetylmuramoyl-L-alanine amidase KHU1_3028 PF04122 Putative cell wall binding repeat 2 KHU1_3029 PF04122 Putative cell wall binding repeat 2 KHU1_3029 PF08486 Stage II sporulation protein KHU1_3031 PF03816 Cell envelope-related transcriptional attenuator domain KHU1_3032 PF02350 UDP-N-acetylglucosamine 2-epimerase KHU1_3033 PF00483 Nucleotidyl transferase KHU1_3034 PF00005 ABC transporter KHU1_3035 PF01061 ABC-2 type transporter KHU1_3036 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KHU1_3037 PF00535 Glycosyl transferase family 2 KHU1_3037 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 KHU1_3038 PF01467 Cytidylyltransferase-like KHU1_3039 PF03808 Glycosyl transferase WecB/TagA/CpsF family KHU1_3040 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KHU1_3041 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KHU1_3041 PF08239 Bacterial SH3 domain KHU1_3041 PF05036 Sporulation related domain KHU1_3042 PF01238 Phosphomannose isomerase type I KHU1_3043 PF03323 Bacillus/Clostridium GerA spore germination protein KHU1_3044 PF03845 Spore germination protein KHU1_3045 PF05504 Spore germination B3/ GerAC like, C-terminal KHU1_3047 PF00083 Sugar (and other) transporter KHU1_3048 PF03816 Cell envelope-related transcriptional attenuator domain KHU1_3050 PF04791 LMBR1-like membrane protein KHU1_3051 PF00877 NlpC/P60 family KHU1_3052 PF09587 Bacterial capsule synthesis protein PGA_cap KHU1_3053 PF14102 Capsule biosynthesis CapC KHU1_3054 PF08245 Mur ligase middle domain KHU1_3055 PF03323 Bacillus/Clostridium GerA spore germination protein KHU1_3056 PF03845 Spore germination protein KHU1_3058 PF00356 Bacterial regulatory proteins, lacI family KHU1_3059 PF00294 pfkB family carbohydrate kinase KHU1_3060 PF05025 RbsD / FucU transport protein family KHU1_3061 PF00005 ABC transporter KHU1_3062 PF02653 Branched-chain amino acid transport system / permease component KHU1_3063 PF13407 Periplasmic binding protein domain KHU1_3064 PF08239 Bacterial SH3 domain KHU1_3065 PF02525 Flavodoxin-like fold KHU1_3066 PF03306 Alpha-acetolactate decarboxylase KHU1_3067 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KHU1_3067 PF00205 Thiamine pyrophosphate enzyme, central domain KHU1_3067 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KHU1_3068 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_3068 PF03466 LysR substrate binding domain KHU1_3069 PF02040 Arsenical pump membrane protein KHU1_3072 PF08757 CotH kinase protein KHU1_3074 PF01613 Flavin reductase like domain KHU1_3076 PF01037 Lrp/AsnC ligand binding domain KHU1_3076 PF13404 AsnC-type helix-turn-helix domain KHU1_3077 PF02417 Chromate transporter KHU1_3078 PF02417 Chromate transporter KHU1_3079 PF04493 Endonuclease V KHU1_3080 PF07661 MORN repeat variant KHU1_3081 PF14431 YwqJ-like deaminase KHU1_3081 PF14449 Pre-toxin TG KHU1_3081 PF04740 LXG domain of WXG superfamily KHU1_3083 PF16888 Domain of unknown function (DUF5082) KHU1_3084 PF09234 Domain of unknown function (DUF1963) KHU1_3085 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KHU1_3085 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KHU1_3085 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KHU1_3087 PF13614 AAA domain KHU1_3088 PF02706 Chain length determinant protein KHU1_3088 PF13807 G-rich domain on putative tyrosine kinase KHU1_3091 PF04434 SWIM zinc finger KHU1_3092 PF12419 SNF2 Helicase protein KHU1_3092 PF00271 Helicase conserved C-terminal domain KHU1_3092 PF00176 SNF2 family N-terminal domain KHU1_3094 PF00455 DeoR C terminal sensor domain KHU1_3094 PF08220 DeoR-like helix-turn-helix domain KHU1_3095 PF00436 Single-strand binding protein family KHU1_3097 PF14183 YwpF-like protein KHU1_3098 PF01741 Large-conductance mechanosensitive channel, MscL KHU1_3099 PF07977 FabA-like domain KHU1_3100 PF18801 response regulator aspartate phosphatase H, N terminal KHU1_3101 PF00460 Flagella basal body rod protein KHU1_3101 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KHU1_3102 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KHU1_3102 PF00460 Flagella basal body rod protein KHU1_3104 PF12116 Stage III sporulation protein D KHU1_3105 PF01047 MarR family KHU1_3106 PF07690 Major Facilitator Superfamily KHU1_3107 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KHU1_3108 PF07690 Major Facilitator Superfamily KHU1_3109 PF00857 Isochorismatase family KHU1_3111 PF00909 Ammonium Transporter Family KHU1_3112 PF00543 Nitrogen regulatory protein P-II KHU1_3113 PF01098 Cell cycle protein KHU1_3114 PF01569 PAP2 superfamily KHU1_3115 PF04892 VanZ like family KHU1_3116 PF01551 Peptidase family M23 KHU1_3117 PF00583 Acetyltransferase (GNAT) family KHU1_3118 PF17319 Family of unknown function (DUF5362) KHU1_3119 PF17370 Family of unknown function (DUF5392) KHU1_3120 PF13396 Phospholipase_D-nuclease N-terminal KHU1_3120 PF13091 PLD-like domain KHU1_3121 PF17319 Family of unknown function (DUF5362) KHU1_3122 PF00457 Glycosyl hydrolases family 11 KHU1_3123 PF02082 Transcriptional regulator KHU1_3124 PF01979 Amidohydrolase family KHU1_3124 PF00449 Urease alpha-subunit, N-terminal domain KHU1_3125 PF00699 Urease beta subunit KHU1_3126 PF00547 Urease, gamma subunit KHU1_3127 PF05532 CsbD-like KHU1_3129 PF17874 MalT-like TPR region KHU1_3129 PF18801 response regulator aspartate phosphatase H, N terminal KHU1_3130 PF04055 Radical SAM superfamily KHU1_3130 PF06463 Molybdenum Cofactor Synthesis C KHU1_3131 PF02634 FdhD/NarQ family KHU1_3132 PF00092 von Willebrand factor type A domain KHU1_3133 PF00092 von Willebrand factor type A domain KHU1_3134 PF08486 Stage II sporulation protein KHU1_3135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KHU1_3136 PF08680 TATA-box binding KHU1_3137 PF06612 Protein of unknown function (DUF1146) KHU1_3139 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KHU1_3139 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KHU1_3140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KHU1_3140 PF02874 ATP synthase alpha/beta family, beta-barrel domain KHU1_3141 PF00231 ATP synthase KHU1_3142 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KHU1_3142 PF00306 ATP synthase alpha/beta chain, C terminal domain KHU1_3142 PF02874 ATP synthase alpha/beta family, beta-barrel domain KHU1_3143 PF00213 ATP synthase delta (OSCP) subunit KHU1_3144 PF00430 ATP synthase B/B' CF(0) KHU1_3145 PF00137 ATP synthase subunit C KHU1_3146 PF00119 ATP synthase A chain KHU1_3147 PF03899 ATP synthase I chain KHU1_3149 PF00464 Serine hydroxymethyltransferase KHU1_3150 PF04260 Protein of unknown function (DUF436) KHU1_3151 PF02502 Ribose/Galactose Isomerase KHU1_3152 PF01451 Low molecular weight phosphotyrosine protein phosphatase KHU1_3153 PF02659 Putative manganese efflux pump KHU1_3154 PF01300 Telomere recombination KHU1_3154 PF03481 Putative GTP-binding controlling metal-binding KHU1_3156 PF09551 Stage II sporulation protein R (spore_II_R) KHU1_3157 PF17094 Uncharacterised protein family (UPF0715) KHU1_3159 PF05175 Methyltransferase small domain KHU1_3159 PF17827 PrmC N-terminal domain KHU1_3160 PF00472 RF-1 domain KHU1_3160 PF03462 PCRF domain KHU1_3161 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHU1_3162 PF13411 MerR HTH family regulatory protein KHU1_3163 PF03547 Membrane transport protein KHU1_3164 PF03949 Malic enzyme, NAD binding domain KHU1_3164 PF00390 Malic enzyme, N-terminal domain KHU1_3165 PF00265 Thymidine kinase KHU1_3166 PF01197 Ribosomal protein L31 KHU1_3167 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KHU1_3167 PF07498 Rho termination factor, N-terminal domain KHU1_3167 PF07497 Rho termination factor, RNA-binding domain KHU1_3168 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KHU1_3169 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KHU1_3170 PF00923 Transaldolase/Fructose-6-phosphate aldolase KHU1_3171 PF01116 Fructose-bisphosphate aldolase class-II KHU1_3172 PF00072 Response regulator receiver domain KHU1_3173 PF10740 Domain of unknown function (DUF2529) KHU1_3174 PF00117 Glutamine amidotransferase class-I KHU1_3174 PF06418 CTP synthase N-terminus KHU1_3175 PF05066 HB1, ASXL, restriction endonuclease HTH domain KHU1_3176 PF13183 4Fe-4S dicluster domain KHU1_3176 PF02754 Cysteine-rich domain KHU1_3177 PF13091 PLD-like domain KHU1_3178 PF03851 UV-endonuclease UvdE KHU1_3180 PF00005 ABC transporter KHU1_3180 PF00664 ABC transporter transmembrane region KHU1_3181 PF13091 PLD-like domain KHU1_3181 PF13396 Phospholipase_D-nuclease N-terminal KHU1_3183 PF02665 Nitrate reductase gamma subunit KHU1_3184 PF02613 Nitrate reductase delta subunit KHU1_3185 PF14711 Respiratory nitrate reductase beta C-terminal KHU1_3185 PF13247 4Fe-4S dicluster domain KHU1_3186 PF14710 Respiratory nitrate reductase alpha N-terminal KHU1_3186 PF01568 Molydopterin dinucleotide binding domain KHU1_3186 PF00384 Molybdopterin oxidoreductase KHU1_3188 PF14256 YwiC-like protein KHU1_3189 PF00027 Cyclic nucleotide-binding domain KHU1_3189 PF00325 Bacterial regulatory proteins, crp family KHU1_3190 PF07690 Major Facilitator Superfamily KHU1_3191 PF03485 Arginyl tRNA synthetase N terminal domain KHU1_3191 PF00750 tRNA synthetases class I (R) KHU1_3191 PF05746 DALR anticodon binding domain KHU1_3192 PF09148 Domain of unknown function (DUF1934) KHU1_3196 PF18801 response regulator aspartate phosphatase H, N terminal KHU1_3197 PF11131 Rap-phr extracellular signalling KHU1_3205 PF00491 Arginase family KHU1_3206 PF17284 Spermidine synthase tetramerisation domain KHU1_3207 PF00905 Penicillin binding protein transpeptidase domain KHU1_3207 PF00912 Transglycosylase KHU1_3209 PF08741 YwhD family KHU1_3210 PF02163 Peptidase family M50 KHU1_3211 PF01361 Tautomerase enzyme KHU1_3212 PF01047 MarR family KHU1_3213 PF13520 Amino acid permease KHU1_3215 PF01966 HD domain KHU1_3216 PF07293 Protein of unknown function (DUF1450) KHU1_3218 PF03551 Transcriptional regulator PadR-like family KHU1_3220 PF00005 ABC transporter KHU1_3221 PF12679 ABC-2 family transporter protein KHU1_3225 PF03099 Biotin/lipoate A/B protein ligase family KHU1_3226 PF03466 LysR substrate binding domain KHU1_3226 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_3227 PF03601 Conserved hypothetical protein 698 KHU1_3228 PF01515 Phosphate acetyl/butaryl transferase KHU1_3231 PF00155 Aminotransferase class I and II KHU1_3232 PF07690 Major Facilitator Superfamily KHU1_3235 PF07883 Cupin domain KHU1_3237 PF07690 Major Facilitator Superfamily KHU1_3238 PF07690 Major Facilitator Superfamily KHU1_3239 PF00324 Amino acid permease KHU1_3240 PF01546 Peptidase family M20/M25/M40 KHU1_3241 PF00171 Aldehyde dehydrogenase family KHU1_3242 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KHU1_3242 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KHU1_3243 PF17735 Biofilm surface layer A KHU1_3244 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KHU1_3245 PF04321 RmlD substrate binding domain KHU1_3246 PF16363 GDP-mannose 4,6 dehydratase KHU1_3247 PF00483 Nucleotidyl transferase KHU1_3248 PF04101 Glycosyltransferase family 28 C-terminal domain KHU1_3249 PF02348 Cytidylyltransferase KHU1_3250 PF08666 SAF domain KHU1_3250 PF03102 NeuB family KHU1_3251 PF00583 Acetyltransferase (GNAT) family KHU1_3252 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KHU1_3253 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KHU1_3254 PF00535 Glycosyl transferase family 2 KHU1_3255 PF09671 Spore coat protein (Spore_GerQ) KHU1_3256 PF04241 Protein of unknown function (DUF423) KHU1_3257 PF00860 Permease family KHU1_3258 PF17261 Family of unknown function (DUF5327) KHU1_3259 PF03167 Uracil DNA glycosylase superfamily KHU1_3260 PF00535 Glycosyl transferase family 2 KHU1_3263 PF03551 Transcriptional regulator PadR-like family KHU1_3264 PF08543 Phosphomethylpyrimidine kinase KHU1_3266 PF08244 Glycosyl hydrolases family 32 C terminal KHU1_3266 PF00251 Glycosyl hydrolases family 32 N-terminal domain KHU1_3267 PF02378 Phosphotransferase system, EIIC KHU1_3267 PF00367 phosphotransferase system, EIIB KHU1_3268 PF03123 CAT RNA binding domain KHU1_3268 PF00874 PRD domain KHU1_3270 PF00082 Subtilase family KHU1_3270 PF13860 FlgD Ig-like domain KHU1_3270 PF02225 PA domain KHU1_3270 PF05922 Peptidase inhibitor I9 KHU1_3271 PF00296 Luciferase-like monooxygenase KHU1_3272 PF13333 Integrase core domain KHU1_3272 PF13276 HTH-like domain KHU1_3272 PF00665 Integrase core domain KHU1_3274 PF00881 Nitroreductase family KHU1_3275 PF01098 Cell cycle protein KHU1_3276 PF00583 Acetyltransferase (GNAT) family KHU1_3277 PF17368 Spore morphogenesis and germination YwcE KHU1_3278 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KHU1_3279 PF00510 Cytochrome c oxidase subunit III KHU1_3280 PF00115 Cytochrome C and Quinol oxidase polypeptide I KHU1_3281 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KHU1_3281 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KHU1_3282 PF04226 Transglycosylase associated protein KHU1_3283 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KHU1_3283 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KHU1_3284 PF00288 GHMP kinases N terminal domain KHU1_3284 PF08544 GHMP kinases C terminal KHU1_3284 PF10509 Galactokinase galactose-binding signature KHU1_3285 PF04138 GtrA-like protein KHU1_3286 PF00440 Bacterial regulatory proteins, tetR family KHU1_3287 PF08671 Anti-repressor SinI KHU1_3290 PF01323 DSBA-like thioredoxin domain KHU1_3291 PF04261 Dyp-type peroxidase family KHU1_3291 PF10518 TAT (twin-arginine translocation) pathway signal sequence KHU1_3292 PF02581 Thiamine monophosphate synthase KHU1_3293 PF02110 Hydroxyethylthiazole kinase family KHU1_3294 PF03466 LysR substrate binding domain KHU1_3294 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_3295 PF03788 LrgA family KHU1_3296 PF04172 LrgB-like family KHU1_3297 PF09962 Uncharacterized conserved protein (DUF2196) KHU1_3298 PF17785 PUA-like domain KHU1_3298 PF10672 S-adenosylmethionine-dependent methyltransferase KHU1_3299 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHU1_3300 PF02378 Phosphotransferase system, EIIC KHU1_3301 PF00082 Subtilase family KHU1_3302 PF01501 Glycosyl transferase family 8 KHU1_3303 PF04607 Region found in RelA / SpoT proteins KHU1_3304 PF01040 UbiA prenyltransferase family KHU1_3305 PF00501 AMP-binding enzyme KHU1_3305 PF13193 AMP-binding enzyme C-terminal domain KHU1_3306 PF03062 MBOAT, membrane-bound O-acyltransferase family KHU1_3307 PF00550 Phosphopantetheine attachment site KHU1_3308 PF04914 DltD protein KHU1_3309 PF01063 Amino-transferase class IV KHU1_3310 PF02056 Family 4 glycosyl hydrolase KHU1_3310 PF11975 Family 4 glycosyl hydrolase C-terminal domain KHU1_3311 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KHU1_3312 PF02378 Phosphotransferase system, EIIC KHU1_3313 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KHU1_3314 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KHU1_3314 PF00874 PRD domain KHU1_3314 PF05043 Mga helix-turn-helix domain KHU1_3314 PF08279 HTH domain KHU1_3315 PF02245 Methylpurine-DNA glycosylase (MPG) KHU1_3317 PF01032 FecCD transport family KHU1_3318 PF01032 FecCD transport family KHU1_3320 PF01022 Bacterial regulatory protein, arsR family KHU1_3321 PF02040 Arsenical pump membrane protein KHU1_3322 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KHU1_3323 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KHU1_3324 PF02378 Phosphotransferase system, EIIC KHU1_3325 PF00232 Glycosyl hydrolase family 1 KHU1_3326 PF00480 ROK family KHU1_3327 PF01238 Phosphomannose isomerase type I KHU1_3328 PF02156 Glycosyl hydrolase family 26 KHU1_3329 PF06628 Catalase-related immune-responsive KHU1_3329 PF00199 Catalase KHU1_3330 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KHU1_3331 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KHU1_3332 PF01256 Carbohydrate kinase KHU1_3333 PF00664 ABC transporter transmembrane region KHU1_3333 PF00005 ABC transporter KHU1_3334 PF00005 ABC transporter KHU1_3334 PF00664 ABC transporter transmembrane region KHU1_3335 PF02322 Cytochrome bd terminal oxidase subunit II KHU1_3336 PF01654 Cytochrome bd terminal oxidase subunit I KHU1_3337 PF03390 2-hydroxycarboxylate transporter family KHU1_3338 PF01522 Polysaccharide deacetylase KHU1_3339 PF00005 ABC transporter KHU1_3339 PF17912 MalK OB fold domain KHU1_3339 PF03459 TOBE domain KHU1_3340 PF13556 PucR C-terminal helix-turn-helix domain KHU1_3341 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHU1_3341 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHU1_3342 PF11611 Domain of unknown function (DUF4352) KHU1_3343 PF16363 GDP-mannose 4,6 dehydratase KHU1_3344 PF07687 Peptidase dimerisation domain KHU1_3344 PF01546 Peptidase family M20/M25/M40 KHU1_3345 PF04525 LURP-one-related KHU1_3346 PF01717 Cobalamin-independent synthase, Catalytic domain KHU1_3347 PF08241 Methyltransferase domain KHU1_3349 PF01773 Na+ dependent nucleoside transporter N-terminus KHU1_3349 PF07662 Na+ dependent nucleoside transporter C-terminus KHU1_3352 PF00199 Catalase KHU1_3352 PF06628 Catalase-related immune-responsive KHU1_3352 PF18011 C-terminal domain found in long catalases KHU1_3353 PF03600 Citrate transporter KHU1_3354 PF00722 Glycosyl hydrolases family 16 KHU1_3355 PF00874 PRD domain KHU1_3355 PF03123 CAT RNA binding domain KHU1_3356 PF11700 Vacuole effluxer Atg22 like KHU1_3357 PF03880 DbpA RNA binding domain KHU1_3357 PF00270 DEAD/DEAH box helicase KHU1_3357 PF00271 Helicase conserved C-terminal domain KHU1_3360 PF14176 YxiJ-like protein KHU1_3366 PF05593 RHS Repeat KHU1_3367 PF00544 Pectate lyase KHU1_3368 PF00892 EamA-like transporter family KHU1_3369 PF00582 Universal stress protein family KHU1_3375 PF00145 C-5 cytosine-specific DNA methylase KHU1_3378 PF04616 Glycosyl hydrolases family 43 KHU1_3378 PF16369 C-terminal lipocalin-like domain KHU1_3379 PF09021 HutP KHU1_3380 PF00221 Aromatic amino acid lyase KHU1_3381 PF17392 Urocanase C-terminal domain KHU1_3381 PF01175 Urocanase Rossmann-like domain KHU1_3381 PF17391 Urocanase N-terminal domain KHU1_3382 PF01979 Amidohydrolase family KHU1_3383 PF00491 Arginase family KHU1_3384 PF00324 Amino acid permease KHU1_3385 PF00591 Glycosyl transferase family, a/b domain KHU1_3385 PF02885 Glycosyl transferase family, helical bundle domain KHU1_3385 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KHU1_3386 PF01773 Na+ dependent nucleoside transporter N-terminus KHU1_3386 PF07662 Na+ dependent nucleoside transporter C-terminus KHU1_3387 PF01791 DeoC/LacD family aldolase KHU1_3388 PF04198 Putative sugar-binding domain KHU1_3391 PF11631 Protein of unknown function (DUF3255) KHU1_3395 PF01497 Periplasmic binding protein KHU1_3396 PF06486 Protein of unknown function (DUF1093) KHU1_3397 PF02687 FtsX-like permease family KHU1_3398 PF00005 ABC transporter KHU1_3399 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_3400 PF00486 Transcriptional regulatory protein, C terminal KHU1_3400 PF00072 Response regulator receiver domain KHU1_3401 PF00512 His Kinase A (phospho-acceptor) domain KHU1_3401 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_3402 PF00072 Response regulator receiver domain KHU1_3402 PF00486 Transcriptional regulatory protein, C terminal KHU1_3403 PF00005 ABC transporter KHU1_3407 PF00072 Response regulator receiver domain KHU1_3407 PF00486 Transcriptional regulatory protein, C terminal KHU1_3408 PF02441 Flavoprotein KHU1_3410 PF00664 ABC transporter transmembrane region KHU1_3410 PF00005 ABC transporter KHU1_3410 PF03412 Peptidase C39 family KHU1_3411 PF01116 Fructose-bisphosphate aldolase class-II KHU1_3412 PF01261 Xylose isomerase-like TIM barrel KHU1_3413 PF01261 Xylose isomerase-like TIM barrel KHU1_3414 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KHU1_3414 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KHU1_3415 PF07690 Major Facilitator Superfamily KHU1_3416 PF01261 Xylose isomerase-like TIM barrel KHU1_3417 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KHU1_3417 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KHU1_3417 PF00205 Thiamine pyrophosphate enzyme, central domain KHU1_3418 PF00294 pfkB family carbohydrate kinase KHU1_3419 PF04962 KduI/IolB family KHU1_3420 PF00171 Aldehyde dehydrogenase family KHU1_3422 PF08220 DeoR-like helix-turn-helix domain KHU1_3422 PF00455 DeoR C terminal sensor domain KHU1_3423 PF00248 Aldo/keto reductase family KHU1_3424 PF00083 Sugar (and other) transporter KHU1_3425 PF00183 Hsp90 protein KHU1_3425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_3428 PF00196 Bacterial regulatory proteins, luxR family KHU1_3428 PF00072 Response regulator receiver domain KHU1_3429 PF07730 Histidine kinase KHU1_3430 PF00487 Fatty acid desaturase KHU1_3431 PF00440 Bacterial regulatory proteins, tetR family KHU1_3432 PF00171 Aldehyde dehydrogenase family KHU1_3433 PF01011 PQQ enzyme repeat KHU1_3433 PF13360 PQQ-like domain KHU1_3433 PF13570 PQQ-like domain KHU1_3434 PF17369 Family of unknown function (DUF5391) KHU1_3436 PF07690 Major Facilitator Superfamily KHU1_3437 PF06271 RDD family KHU1_3439 PF00578 AhpC/TSA family KHU1_3440 PF13192 Thioredoxin domain KHU1_3440 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHU1_3441 PF13784 Fic/DOC family N-terminal KHU1_3441 PF02661 Fic/DOC family KHU1_3442 PF00324 Amino acid permease KHU1_3443 PF06874 Firmicute fructose-1,6-bisphosphatase KHU1_3444 PF00111 2Fe-2S iron-sulfur cluster binding domain KHU1_3444 PF01799 [2Fe-2S] binding domain KHU1_3446 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KHU1_3446 PF00111 2Fe-2S iron-sulfur cluster binding domain KHU1_3446 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KHU1_3446 PF01799 [2Fe-2S] binding domain KHU1_3447 PF12804 MobA-like NTP transferase domain KHU1_3448 PF02625 XdhC and CoxI family KHU1_3448 PF13478 XdhC Rossmann domain KHU1_3451 PF04471 Restriction endonuclease KHU1_3451 PF14338 Mrr N-terminal domain KHU1_3453 PF02590 Predicted SPOUT methyltransferase KHU1_3457 PF00248 Aldo/keto reductase family KHU1_3458 PF00583 Acetyltransferase (GNAT) family KHU1_3459 PF18801 response regulator aspartate phosphatase H, N terminal KHU1_3460 PF00491 Arginase family KHU1_3461 PF00324 Amino acid permease KHU1_3462 PF00202 Aminotransferase class-III KHU1_3463 PF13630 SdpI/YhfL protein family KHU1_3463 PF07853 Protein of unknown function (DUF1648) KHU1_3464 PF01022 Bacterial regulatory protein, arsR family KHU1_3465 PF00158 Sigma-54 interaction domain KHU1_3465 PF13426 PAS domain KHU1_3465 PF02954 Bacterial regulatory protein, Fis family KHU1_3467 PF16326 ABC transporter C-terminal domain KHU1_3467 PF12848 ABC transporter KHU1_3467 PF00005 ABC transporter KHU1_3470 PF00899 ThiF family KHU1_3471 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_3471 PF00512 His Kinase A (phospho-acceptor) domain KHU1_3471 PF00672 HAMP domain KHU1_3472 PF00072 Response regulator receiver domain KHU1_3472 PF00486 Transcriptional regulatory protein, C terminal KHU1_3473 PF13180 PDZ domain KHU1_3474 PF00753 Metallo-beta-lactamase superfamily KHU1_3475 PF09648 YycH protein KHU1_3476 PF07435 YycH protein KHU1_3477 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_3477 PF13426 PAS domain KHU1_3477 PF00512 His Kinase A (phospho-acceptor) domain KHU1_3477 PF00672 HAMP domain KHU1_3478 PF00072 Response regulator receiver domain KHU1_3478 PF00486 Transcriptional regulatory protein, C terminal KHU1_3479 PF00709 Adenylosuccinate synthetase KHU1_3480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHU1_3481 PF03796 DnaB-like helicase C terminal domain KHU1_3481 PF00772 DnaB-like helicase N terminal domain KHU1_3482 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) KHU1_3484 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase KHU1_3485 PF13439 Glycosyltransferase Family 4 KHU1_3485 PF00534 Glycosyl transferases group 1 KHU1_3487 PF02222 ATP-grasp domain KHU1_3488 PF00534 Glycosyl transferases group 1 KHU1_3488 PF13439 Glycosyltransferase Family 4 KHU1_3491 PF01281 Ribosomal protein L9, N-terminal domain KHU1_3491 PF03948 Ribosomal protein L9, C-terminal domain KHU1_3492 PF01368 DHH family KHU1_3492 PF02272 DHHA1 domain KHU1_3493 PF09991 Predicted membrane protein (DUF2232) KHU1_3494 PF07875 Coat F domain KHU1_3495 PF01638 HxlR-like helix-turn-helix KHU1_3496 PF01368 DHH family KHU1_3496 PF02833 DHHA2 domain KHU1_3498 PF00665 Integrase core domain KHU1_3498 PF13276 HTH-like domain KHU1_3498 PF13333 Integrase core domain KHU1_3499 PF00892 EamA-like transporter family KHU1_3500 PF02435 Levansucrase/Invertase KHU1_3501 PF00251 Glycosyl hydrolases family 32 N-terminal domain KHU1_3501 PF08244 Glycosyl hydrolases family 32 C terminal KHU1_3502 PF07729 FCD domain KHU1_3502 PF00392 Bacterial regulatory proteins, gntR family KHU1_3503 PF05163 DinB family KHU1_3504 PF07690 Major Facilitator Superfamily KHU1_3505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_3505 PF03466 LysR substrate binding domain KHU1_3506 PF01810 LysE type translocator KHU1_3508 PF00881 Nitroreductase family KHU1_3509 PF01047 MarR family KHU1_3510 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHU1_3510 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHU1_3511 PF01047 MarR family KHU1_3512 PF13673 Acetyltransferase (GNAT) domain KHU1_3514 PF02627 Carboxymuconolactone decarboxylase family KHU1_3515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHU1_3515 PF03466 LysR substrate binding domain KHU1_3517 PF00155 Aminotransferase class I and II KHU1_3517 PF00392 Bacterial regulatory proteins, gntR family KHU1_3518 PF00892 EamA-like transporter family KHU1_3519 PF03190 Protein of unknown function, DUF255 KHU1_3520 PF02517 CPBP intramembrane metalloprotease KHU1_3521 PF00083 Sugar (and other) transporter KHU1_3522 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHU1_3523 PF00356 Bacterial regulatory proteins, lacI family KHU1_3523 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KHU1_3524 PF03372 Endonuclease/Exonuclease/phosphatase family KHU1_3525 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KHU1_3525 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KHU1_3526 PF12833 Helix-turn-helix domain KHU1_3526 PF02805 Metal binding domain of Ada KHU1_3527 PF01084 Ribosomal protein S18 KHU1_3528 PF00436 Single-strand binding protein family KHU1_3529 PF01250 Ribosomal protein S6 KHU1_3530 PF06071 Protein of unknown function (DUF933) KHU1_3530 PF01926 50S ribosome-binding GTPase KHU1_3531 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KHU1_3531 PF00384 Molybdopterin oxidoreductase KHU1_3531 PF01568 Molydopterin dinucleotide binding domain KHU1_3532 PF06107 Bacterial protein of unknown function (DUF951) KHU1_3535 PF06866 Protein of unknown function (DUF1256) KHU1_3536 PF02195 ParB-like nuclease domain KHU1_3536 PF17762 HTH domain found in ParB protein KHU1_3537 PF13614 AAA domain KHU1_3538 PF02195 ParB-like nuclease domain KHU1_3538 PF17762 HTH domain found in ParB protein KHU1_3539 PF02527 rRNA small subunit methyltransferase G KHU1_3540 PF13932 GidA associated domain KHU1_3540 PF01134 Glucose inhibited division protein A KHU1_3541 PF12631 MnmE helical domain KHU1_3541 PF10396 GTP-binding protein TrmE N-terminus KHU1_3541 PF01926 50S ribosome-binding GTPase KHU1_3542 PF01424 R3H domain KHU1_3542 PF14804 Jag N-terminus KHU1_3543 PF02096 60Kd inner membrane protein KHU1_3544 PF00825 Ribonuclease P KHU1_3546 PF00308 Bacterial dnaA protein KHU1_3546 PF08299 Bacterial dnaA protein helix-turn-helix KHU1_3546 PF11638 DnaA N-terminal domain KHU1_3547 PF02767 DNA polymerase III beta subunit, central domain KHU1_3547 PF00712 DNA polymerase III beta subunit, N-terminal domain KHU1_3547 PF02768 DNA polymerase III beta subunit, C-terminal domain KHU1_3549 PF02463 RecF/RecN/SMC N terminal domain KHU1_3550 PF04025 Domain of unknown function (DUF370) KHU1_3551 PF01751 Toprim domain KHU1_3551 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHU1_3551 PF00986 DNA gyrase B subunit, carboxyl terminus KHU1_3551 PF00204 DNA gyrase B KHU1_3552 PF00521 DNA gyrase/topoisomerase IV, subunit A KHU1_3552 PF03989 DNA gyrase C-terminal domain, beta-propeller KHU1_3553 PF14175 YaaC-like Protein KHU1_3554 PF00478 IMP dehydrogenase / GMP reductase domain KHU1_3554 PF00571 CBS domain KHU1_3555 PF00768 D-alanyl-D-alanine carboxypeptidase KHU1_3555 PF07943 Penicillin-binding protein 5, C-terminal domain KHU1_3556 PF01680 SOR/SNZ family KHU1_3557 PF01174 SNO glutamine amidotransferase family KHU1_3558 PF02403 Seryl-tRNA synthetase N-terminal domain KHU1_3558 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KHU1_3559 PF02595 Glycerate kinase family KHU1_3560 PF01712 Deoxynucleoside kinase KHU1_3561 PF01712 Deoxynucleoside kinase KHU1_3562 PF00704 Glycosyl hydrolases family 18 KHU1_3562 PF01476 LysM domain KHU1_3563 PF00857 Isochorismatase family KHU1_3564 PF14437 MafB19-like deaminase KHU1_3565 PF12169 DNA polymerase III subunits gamma and tau domain III KHU1_3566 PF02575 YbaB/EbfC DNA-binding family KHU1_3567 PF13662 Toprim domain KHU1_3567 PF02132 RecR protein KHU1_3568 PF10704 Protein of unknown function (DUF2508) KHU1_3569 PF07441 SigmaK-factor processing regulatory protein BofA KHU1_3570 PF10764 Inhibitor of sigma-G Gin KHU1_3571 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein KHU1_3572 PF05816 Toxic anion resistance protein (TelA) KHU1_3573 PF01276 Orn/Lys/Arg decarboxylase, major domain KHU1_3573 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KHU1_3574 PF02223 Thymidylate kinase KHU1_3575 PF06153 Cyclic-di-AMP receptor KHU1_3576 PF03885 Protein of unknown function (DUF327) KHU1_3577 PF09115 DNA polymerase III, delta subunit, C terminal KHU1_3578 PF04468 PSP1 C-terminal conserved region KHU1_3579 PF06156 Initiation control protein YabA KHU1_3580 PF05175 Methyltransferase small domain KHU1_3581 PF01541 GIY-YIG catalytic domain KHU1_3582 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KHU1_3583 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KHU1_3583 PF18277 AbrB C-terminal domain KHU1_3584 PF01588 Putative tRNA binding domain KHU1_3584 PF08264 Anticodon-binding domain of tRNA KHU1_3584 PF09334 tRNA synthetases class I (M) KHU1_3585 PF01026 TatD related DNase KHU1_3586 PF06725 3D domain KHU1_3586 PF03990 G5-linked-Ubiquitin-like domain KHU1_3586 PF07501 G5 domain KHU1_3587 PF13331 Domain of unknown function (DUF4093) KHU1_3587 PF13662 Toprim domain KHU1_3588 PF00398 Ribosomal RNA adenine dimethylase KHU1_3589 PF05582 YabG peptidase U57 KHU1_3590 PF06257 Biofilm formation stimulator VEG KHU1_3591 PF00269 Small, acid-soluble spore proteins, alpha/beta type KHU1_3592 PF00288 GHMP kinases N terminal domain KHU1_3592 PF08544 GHMP kinases C terminal KHU1_3593 PF09182 Bacterial purine repressor, N-terminal KHU1_3593 PF00156 Phosphoribosyl transferase domain KHU1_3594 PF01042 Endoribonuclease L-PSP KHU1_3595 PF04026 SpoVG KHU1_3596 PF00132 Bacterial transferase hexapeptide (six repeats) KHU1_3596 PF00483 Nucleotidyl transferase KHU1_3597 PF14572 Phosphoribosyl synthetase-associated domain KHU1_3597 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KHU1_3598 PF01386 Ribosomal L25p family KHU1_3598 PF14693 Ribosomal protein TL5, C-terminal domain KHU1_3599 PF01195 Peptidyl-tRNA hydrolase KHU1_3600 PF10955 Protein of unknown function (DUF2757) KHU1_3601 PF17757 UvrB interaction domain KHU1_3601 PF02559 CarD-like/TRCF domain KHU1_3601 PF03461 TRCF domain KHU1_3601 PF00271 Helicase conserved C-terminal domain KHU1_3601 PF00270 DEAD/DEAH box helicase KHU1_3602 PF15714 Stage V sporulation protein T C-terminal, transcription factor KHU1_3602 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KHU1_3603 PF01943 Polysaccharide biosynthesis protein KHU1_3603 PF14667 Polysaccharide biosynthesis C-terminal domain KHU1_3604 PF03819 MazG nucleotide pyrophosphohydrolase domain KHU1_3604 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KHU1_3605 PF01479 S4 domain KHU1_3606 PF07873 YabP family KHU1_3607 PF09578 Spore cortex protein YabQ (Spore_YabQ) KHU1_3608 PF04977 Septum formation initiator KHU1_3609 PF00575 S1 RNA binding domain KHU1_3610 PF07228 Stage II sporulation protein E (SpoIIE) KHU1_3611 PF00092 von Willebrand factor type A domain KHU1_3612 PF00069 Protein kinase domain KHU1_3613 PF11734 TilS substrate C-terminal domain KHU1_3613 PF09179 TilS substrate binding domain KHU1_3613 PF01171 PP-loop family KHU1_3615 PF00004 ATPase family associated with various cellular activities (AAA) KHU1_3615 PF01434 Peptidase family M41 KHU1_3615 PF17862 AAA+ lid domain KHU1_3615 PF06480 FtsH Extracellular KHU1_3616 PF03309 Type III pantothenate kinase KHU1_3617 PF01430 Hsp33 protein KHU1_3618 PF13145 PPIC-type PPIASE domain KHU1_3619 PF00291 Pyridoxal-phosphate dependent enzyme KHU1_3620 PF04715 Anthranilate synthase component I, N terminal region KHU1_3620 PF00425 chorismate binding enzyme KHU1_3621 PF00117 Glutamine amidotransferase class-I KHU1_3622 PF01063 Amino-transferase class IV KHU1_3623 PF00809 Pterin binding enzyme KHU1_3624 PF02152 Dihydroneopterin aldolase KHU1_3625 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KHU1_3626 PF01381 Helix-turn-helix KHU1_3627 PF01207 Dihydrouridine synthase (Dus) KHU1_3628 PF00152 tRNA synthetases class II (D, K and N) KHU1_3628 PF01336 OB-fold nucleic acid binding domain KHU1_3629 PF05848 CtsR N-terminal HTH domain KHU1_3629 PF17727 CtsR C-terminal dimerization domain KHU1_3630 PF02151 UvrB/uvrC motif KHU1_3631 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KHU1_3632 PF00004 ATPase family associated with various cellular activities (AAA) KHU1_3632 PF10431 C-terminal, D2-small domain, of ClpB protein KHU1_3632 PF07724 AAA domain (Cdc48 subfamily) KHU1_3632 PF17871 AAA lid domain KHU1_3632 PF02861 Clp amino terminal domain, pathogenicity island component KHU1_3633 PF18073 Rubredoxin metal binding domain KHU1_3634 PF02457 DisA bacterial checkpoint controller nucleotide-binding KHU1_3634 PF10635 DisA bacterial checkpoint controller linker region KHU1_3636 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KHU1_3637 PF02542 YgbB family KHU1_3638 PF00749 tRNA synthetases class I (E and Q), catalytic domain KHU1_3639 PF06426 Serine acetyltransferase, N-terminal KHU1_3639 PF00132 Bacterial transferase hexapeptide (six repeats) KHU1_3640 PF01406 tRNA synthetases class I (C) catalytic domain KHU1_3640 PF09190 DALR domain KHU1_3641 PF00636 Ribonuclease III domain KHU1_3642 PF08032 RNA 2'-O ribose methyltransferase substrate binding KHU1_3642 PF00588 SpoU rRNA Methylase family KHU1_3643 PF05991 YacP-like NYN domain KHU1_3644 PF04542 Sigma-70 region 2 KHU1_3644 PF08281 Sigma-70, region 4 KHU1_3645 PF00471 Ribosomal protein L33 KHU1_3646 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KHU1_3647 PF00467 KOW motif KHU1_3647 PF02357 Transcription termination factor nusG KHU1_3648 PF00298 Ribosomal protein L11, RNA binding domain KHU1_3648 PF03946 Ribosomal protein L11, N-terminal domain KHU1_3649 PF00687 Ribosomal protein L1p/L10e family KHU1_3650 PF00466 Ribosomal protein L10 KHU1_3651 PF00542 Ribosomal protein L7/L12 C-terminal domain KHU1_3651 PF16320 Ribosomal protein L7/L12 dimerisation domain KHU1_3652 PF05175 Methyltransferase small domain KHU1_3653 PF04561 RNA polymerase Rpb2, domain 2 KHU1_3653 PF10385 RNA polymerase beta subunit external 1 domain KHU1_3653 PF00562 RNA polymerase Rpb2, domain 6 KHU1_3653 PF04560 RNA polymerase Rpb2, domain 7 KHU1_3653 PF04563 RNA polymerase beta subunit KHU1_3653 PF04565 RNA polymerase Rpb2, domain 3 KHU1_3654 PF04997 RNA polymerase Rpb1, domain 1 KHU1_3654 PF00623 RNA polymerase Rpb1, domain 2 KHU1_3654 PF04983 RNA polymerase Rpb1, domain 3 KHU1_3654 PF05000 RNA polymerase Rpb1, domain 4 KHU1_3654 PF04998 RNA polymerase Rpb1, domain 5 KHU1_3655 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KHU1_3656 PF00164 Ribosomal protein S12/S23 KHU1_3657 PF00177 Ribosomal protein S7p/S5e KHU1_3658 PF03144 Elongation factor Tu domain 2 KHU1_3658 PF03764 Elongation factor G, domain IV KHU1_3658 PF14492 Elongation Factor G, domain II KHU1_3658 PF00679 Elongation factor G C-terminus KHU1_3658 PF00009 Elongation factor Tu GTP binding domain KHU1_3659 PF03144 Elongation factor Tu domain 2 KHU1_3659 PF03143 Elongation factor Tu C-terminal domain KHU1_3659 PF00009 Elongation factor Tu GTP binding domain KHU1_3660 PF12146 Serine aminopeptidase, S33 KHU1_3661 PF00338 Ribosomal protein S10p/S20e KHU1_3662 PF00297 Ribosomal protein L3 KHU1_3663 PF00573 Ribosomal protein L4/L1 family KHU1_3664 PF00276 Ribosomal protein L23 KHU1_3665 PF03947 Ribosomal Proteins L2, C-terminal domain KHU1_3665 PF00181 Ribosomal Proteins L2, RNA binding domain KHU1_3666 PF00203 Ribosomal protein S19 KHU1_3667 PF00237 Ribosomal protein L22p/L17e KHU1_3668 PF00189 Ribosomal protein S3, C-terminal domain KHU1_3668 PF07650 KH domain KHU1_3669 PF00252 Ribosomal protein L16p/L10e KHU1_3670 PF00831 Ribosomal L29 protein KHU1_3671 PF00366 Ribosomal protein S17 KHU1_3672 PF00238 Ribosomal protein L14p/L23e KHU1_3673 PF00467 KOW motif KHU1_3673 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KHU1_3674 PF00281 Ribosomal protein L5 KHU1_3674 PF00673 ribosomal L5P family C-terminus KHU1_3675 PF00253 Ribosomal protein S14p/S29e KHU1_3676 PF00410 Ribosomal protein S8 KHU1_3677 PF00347 Ribosomal protein L6 KHU1_3678 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KHU1_3679 PF00333 Ribosomal protein S5, N-terminal domain KHU1_3679 PF03719 Ribosomal protein S5, C-terminal domain KHU1_3680 PF00327 Ribosomal protein L30p/L7e KHU1_3681 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KHU1_3682 PF00344 SecY translocase KHU1_3683 PF05191 Adenylate kinase, active site lid KHU1_3684 PF00557 Metallopeptidase family M24 KHU1_3685 PF01176 Translation initiation factor 1A / IF-1 KHU1_3686 PF00444 Ribosomal protein L36 KHU1_3687 PF00416 Ribosomal protein S13/S18 KHU1_3688 PF00411 Ribosomal protein S11 KHU1_3689 PF01000 RNA polymerase Rpb3/RpoA insert domain KHU1_3689 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KHU1_3689 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KHU1_3690 PF01196 Ribosomal protein L17 KHU1_3691 PF00005 ABC transporter KHU1_3692 PF00005 ABC transporter KHU1_3693 PF02361 Cobalt transport protein KHU1_3694 PF01416 tRNA pseudouridine synthase KHU1_3695 PF00572 Ribosomal protein L13 KHU1_3696 PF00380 Ribosomal protein S9/S16 KHU1_3697 PF08241 Methyltransferase domain KHU1_3698 PF05163 DinB family KHU1_3699 PF10730 Protein of unknown function (DUF2521) KHU1_3700 PF01520 N-acetylmuramoyl-L-alanine amidase KHU1_3701 PF10609 NUBPL iron-transfer P-loop NTPase KHU1_3702 PF17898 Spore germination GerD central core domain KHU1_3703 PF14089 KinB-signalling pathway activation in sporulation KHU1_3704 PF01522 Polysaccharide deacetylase