KHU1_0004 SM00829 Enoylreductase KHU1_0012 SM00342 helix_turn_helix, arabinose operon control protein KHU1_0032 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_0036 SM00421 helix_turn_helix, Lux Regulon KHU1_0036 SM00448 cheY-homologous receiver domain KHU1_0037 SM00382 ATPases associated with a variety of cellular activities KHU1_0055 SM00530 Helix-turn-helix XRE-family like proteins KHU1_0062 SM00450 Rhodanese Homology Domain KHU1_0069 SM00387 Histidine kinase-like ATPases KHU1_0070 SM00448 cheY-homologous receiver domain KHU1_0088 SM00870 KHU1_0088 KHU1_0096 SM00028 Tetratricopeptide repeats KHU1_0098 SM00642 Alpha-amylase domain KHU1_0100 SM00382 ATPases associated with a variety of cellular activities KHU1_0110 SM00116 Domain in cystathionine beta-synthase and other proteins. KHU1_0110 SM00382 ATPases associated with a variety of cellular activities KHU1_0116 SM00632 KHU1_0116 KHU1_0116 SM00642 Alpha-amylase domain KHU1_0119 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_0139 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KHU1_0142 SM00833 Cobalamin synthesis protein cobW C-terminal domain KHU1_0150 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family KHU1_0153 SM00823 Phosphopantetheine attachment site KHU1_0154 SM00823 Phosphopantetheine attachment site KHU1_0155 SM00823 Phosphopantetheine attachment site KHU1_0160 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_0163 SM00382 ATPases associated with a variety of cellular activities KHU1_0165 SM00062 Bacterial periplasmic substrate-binding proteins KHU1_0172 SM00710 Parallel beta-helix repeats KHU1_0172 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses KHU1_0179 SM00062 Bacterial periplasmic substrate-binding proteins KHU1_0181 SM00382 ATPases associated with a variety of cellular activities KHU1_0184 SM00382 ATPases associated with a variety of cellular activities KHU1_0186 SM00448 cheY-homologous receiver domain KHU1_0186 SM00862 Transcriptional regulatory protein, C terminal KHU1_0187 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KHU1_0187 SM00387 Histidine kinase-like ATPases KHU1_0187 SM00388 His Kinase A (phosphoacceptor) domain KHU1_0188 SM00028 Tetratricopeptide repeats KHU1_0193 SM00382 ATPases associated with a variety of cellular activities KHU1_0199 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KHU1_0200 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_0207 SM00420 helix_turn_helix, Deoxyribose operon repressor KHU1_0217 SM00796 Allophanate hydrolase subunit 1 KHU1_0218 SM00797 Allophanate hydrolase subunit 2 KHU1_0219 SM00346 helix_turn_helix isocitrate lyase regulation KHU1_0232 SM00344 helix_turn_helix ASNC type KHU1_0233 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KHU1_0233 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KHU1_0233 SM00493 KHU1_0233 KHU1_0235 SM00267 diguanylate cyclase KHU1_0262 SM00091 PAS domain KHU1_0262 SM00387 Histidine kinase-like ATPases KHU1_0263 SM00448 cheY-homologous receiver domain KHU1_0266 SM00382 ATPases associated with a variety of cellular activities KHU1_0274 SM00487 DEAD-like helicases superfamily KHU1_0274 SM00490 helicase superfamily c-terminal domain KHU1_0280 SM01005 Alanine racemase, C-terminal domain KHU1_0285 SM00387 Histidine kinase-like ATPases KHU1_0286 SM00331 Sigma factor PP2C-like phosphatases KHU1_0290 SM00331 Sigma factor PP2C-like phosphatases KHU1_0290 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KHU1_0291 SM00316 Ribosomal protein S1-like RNA-binding domain KHU1_0291 SM00732 Likely ribonuclease with RNase H fold. KHU1_0292 SM00731 SprT homologues. KHU1_0300 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_0307 SM00822 KHU1_0307 KHU1_0308 SM00829 Enoylreductase KHU1_0310 SM00357 Cold shock protein domain KHU1_0311 SM01058 CarD-like/TRCF domain KHU1_0315 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_0326 SM01130 KHU1_0326 KHU1_0336 SM00829 Enoylreductase KHU1_0337 SM00422 helix_turn_helix, mercury resistance KHU1_0339 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_0345 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_0352 SM00387 Histidine kinase-like ATPases KHU1_0353 SM00421 helix_turn_helix, Lux Regulon KHU1_0353 SM00448 cheY-homologous receiver domain KHU1_0356 SM00382 ATPases associated with a variety of cellular activities KHU1_0361 SM00825 Beta-ketoacyl synthase KHU1_0362 SM00530 Helix-turn-helix XRE-family like proteins KHU1_0365 SM00422 helix_turn_helix, mercury resistance KHU1_0369 SM01329 KHU1_0369 KHU1_0370 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_0370 SM00895 KHU1_0370 KHU1_0377 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_0377 SM00866 KHU1_0377 KHU1_0378 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_0378 SM00895 KHU1_0378 KHU1_0386 SM00829 Enoylreductase KHU1_0393 SM00382 ATPases associated with a variety of cellular activities KHU1_0395 SM00881 CoA binding domain KHU1_0400 SM00883 Chaperonin 10 Kd subunit KHU1_0402 SM00487 DEAD-like helicases superfamily KHU1_0402 SM00490 helicase superfamily c-terminal domain KHU1_0403 SM00028 Tetratricopeptide repeats KHU1_0403 SM00382 ATPases associated with a variety of cellular activities KHU1_0404 SM00829 Enoylreductase KHU1_0415 SM00829 Enoylreductase KHU1_0424 SM00460 Transglutaminase/protease-like homologues KHU1_0435 SM01001 AIR carboxylase KHU1_0437 SM00998 Adenylosuccinate lyase C-terminus KHU1_0440 SM01211 KHU1_0440 KHU1_0445 SM00798 AICARFT/IMPCHase bienzyme KHU1_0445 SM00851 MGS-like domain KHU1_0446 SM01209 KHU1_0446 KHU1_0446 SM01210 KHU1_0446 KHU1_0455 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KHU1_0455 SM00292 breast cancer carboxy-terminal domain KHU1_0455 SM00532 Ligase N family KHU1_0465 SM00845 GatB domain KHU1_0468 SM00046 Diacylglycerol kinase catalytic domain (presumed) KHU1_0471 SM00382 ATPases associated with a variety of cellular activities KHU1_0497 SM00382 ATPases associated with a variety of cellular activities KHU1_0501 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_0514 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KHU1_0517 SM00382 ATPases associated with a variety of cellular activities KHU1_0518 SM00422 helix_turn_helix, mercury resistance KHU1_0520 SM00382 ATPases associated with a variety of cellular activities KHU1_0521 SM00487 DEAD-like helicases superfamily KHU1_0521 SM00490 helicase superfamily c-terminal domain KHU1_0523 SM00829 Enoylreductase KHU1_0526 SM00656 KHU1_0526 KHU1_0532 SM00091 PAS domain KHU1_0532 SM00387 Histidine kinase-like ATPases KHU1_0533 SM00448 cheY-homologous receiver domain KHU1_0536 SM00849 Metallo-beta-lactamase superfamily KHU1_0550 SM00642 Alpha-amylase domain KHU1_0551 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_0551 SM00866 KHU1_0551 KHU1_0557 SM00354 helix_turn _helix lactose operon repressor KHU1_0562 SM00226 Low molecular weight phosphatase family KHU1_0575 SM00478 endonuclease III KHU1_0581 SM00861 Transketolase, pyrimidine binding domain KHU1_0584 SM00382 ATPases associated with a variety of cellular activities KHU1_0589 SM00382 ATPases associated with a variety of cellular activities KHU1_0590 SM00382 ATPases associated with a variety of cellular activities KHU1_0601 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_0614 SM00287 Bacterial SH3 domain homologues KHU1_0620 SM00478 endonuclease III KHU1_0620 SM00525 KHU1_0620 KHU1_0626 SM00382 ATPases associated with a variety of cellular activities KHU1_0641 SM00382 ATPases associated with a variety of cellular activities KHU1_0642 SM00382 ATPases associated with a variety of cellular activities KHU1_0643 SM01060 KHU1_0643 KHU1_0645 SM00382 ATPases associated with a variety of cellular activities KHU1_0646 SM00062 Bacterial periplasmic substrate-binding proteins KHU1_0651 SM00530 Helix-turn-helix XRE-family like proteins KHU1_0653 SM00567 E-Z type HEAT repeats KHU1_0659 SM00763 PrkA AAA domain KHU1_0661 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_0667 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_0668 SM00382 ATPases associated with a variety of cellular activities KHU1_0669 SM00382 ATPases associated with a variety of cellular activities KHU1_0671 SM00357 Cold shock protein domain KHU1_0673 SM00267 diguanylate cyclase KHU1_0683 SM00116 Domain in cystathionine beta-synthase and other proteins. KHU1_0692 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. KHU1_0692 SM00387 Histidine kinase-like ATPases KHU1_0693 SM00421 helix_turn_helix, Lux Regulon KHU1_0693 SM00448 cheY-homologous receiver domain KHU1_0697 SM00257 Lysin motif KHU1_0701 SM00098 Alkaline phosphatase homologues KHU1_0702 SM00257 Lysin motif KHU1_0711 SM00563 Phosphate acyltransferases KHU1_0712 SM01091 Transporter associated domain KHU1_0713 SM00422 helix_turn_helix, mercury resistance KHU1_0715 SM00825 Beta-ketoacyl synthase KHU1_0716 SM01091 Transporter associated domain KHU1_0729 SM00382 ATPases associated with a variety of cellular activities KHU1_0730 SM00382 ATPases associated with a variety of cellular activities KHU1_0741 SM00729 Elongator protein 3, MiaB family, Radical SAM KHU1_0748 SM00382 ATPases associated with a variety of cellular activities KHU1_0752 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KHU1_0760 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_0766 SM00382 ATPases associated with a variety of cellular activities KHU1_0782 SM00849 Metallo-beta-lactamase superfamily KHU1_0791 SM00855 Phosphoglycerate mutase family KHU1_0795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KHU1_0798 SM00914 KHU1_0798 KHU1_0804 SM00894 Excalibur calcium-binding domain KHU1_0812 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_0837 SM00342 helix_turn_helix, arabinose operon control protein KHU1_0840 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_0845 SM00316 Ribosomal protein S1-like RNA-binding domain KHU1_0847 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KHU1_0847 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KHU1_0859 SM00859 Semialdehyde dehydrogenase, NAD binding domain KHU1_0863 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain KHU1_0864 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KHU1_0875 SM00825 Beta-ketoacyl synthase KHU1_0877 SM00382 ATPases associated with a variety of cellular activities KHU1_0878 SM00382 ATPases associated with a variety of cellular activities KHU1_0887 SM00382 ATPases associated with a variety of cellular activities KHU1_0888 SM00382 ATPases associated with a variety of cellular activities KHU1_0900 SM01118 KHU1_0900 KHU1_0902 SM00954 Region found in RelA / SpoT proteins KHU1_0926 SM00849 Metallo-beta-lactamase superfamily KHU1_0928 SM00382 ATPases associated with a variety of cellular activities KHU1_0929 SM00966 SpoVT / AbrB like domain KHU1_0939 SM00530 Helix-turn-helix XRE-family like proteins KHU1_0940 SM00530 Helix-turn-helix XRE-family like proteins KHU1_0950 SM00382 ATPases associated with a variety of cellular activities KHU1_0980 SM00257 Lysin motif KHU1_0992 SM00644 KHU1_0992 KHU1_0995 SM00860 SMI1 / KNR4 family KHU1_1012 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_1020 SM00420 helix_turn_helix, Deoxyribose operon repressor KHU1_1020 SM01134 KHU1_1020 KHU1_1023 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_1030 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KHU1_1030 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KHU1_1037 SM00382 ATPases associated with a variety of cellular activities KHU1_1044 SM00354 helix_turn _helix lactose operon repressor KHU1_1046 SM00858 KHU1_1046 KHU1_1049 SM00028 Tetratricopeptide repeats KHU1_1050 SM00257 Lysin motif KHU1_1050 SM00644 KHU1_1050 KHU1_1054 SM00530 Helix-turn-helix XRE-family like proteins KHU1_1057 SM00382 ATPases associated with a variety of cellular activities KHU1_1075 SM00257 Lysin motif KHU1_1088 SM00257 Lysin motif KHU1_1088 SM00644 KHU1_1088 KHU1_1097 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KHU1_1102 SM00382 ATPases associated with a variety of cellular activities KHU1_1105 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain KHU1_1107 SM00382 ATPases associated with a variety of cellular activities KHU1_1115 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KHU1_1118 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_1122 SM00028 Tetratricopeptide repeats KHU1_1125 SM00100 Cyclic nucleotide-monophosphate binding domain KHU1_1130 SM00382 ATPases associated with a variety of cellular activities KHU1_1133 SM00257 Lysin motif KHU1_1133 SM00636 KHU1_1133 KHU1_1134 SM00116 Domain in cystathionine beta-synthase and other proteins. KHU1_1134 SM00924 MgtE intracellular N domain KHU1_1135 SM00422 helix_turn_helix, mercury resistance KHU1_1137 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_1140 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen KHU1_1151 SM00091 PAS domain KHU1_1151 SM00387 Histidine kinase-like ATPases KHU1_1151 SM00388 His Kinase A (phosphoacceptor) domain KHU1_1159 SM01007 Class II Aldolase and Adducin N-terminal domain KHU1_1163 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_1166 SM00382 ATPases associated with a variety of cellular activities KHU1_1166 SM01086 C-terminal, D2-small domain, of ClpB protein KHU1_1175 SM00822 KHU1_1175 KHU1_1177 SM00257 Lysin motif KHU1_1178 SM00257 Lysin motif KHU1_1179 SM00636 KHU1_1179 KHU1_1188 SM00354 helix_turn _helix lactose operon repressor KHU1_1189 SM01061 CAT RNA binding domain KHU1_1195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KHU1_1195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KHU1_1199 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KHU1_1199 SM00091 PAS domain KHU1_1199 SM00387 Histidine kinase-like ATPases KHU1_1199 SM00388 His Kinase A (phosphoacceptor) domain KHU1_1201 SM00260 Two component signalling adaptor domain KHU1_1201 SM00448 cheY-homologous receiver domain KHU1_1204 SM00257 Lysin motif KHU1_1208 SM00052 Putative diguanylate phosphodiesterase KHU1_1226 SM00852 Probable molybdopterin binding domain KHU1_1232 SM00382 ATPases associated with a variety of cellular activities KHU1_1233 SM01066 Carbohydrate binding domain KHU1_1234 SM00420 helix_turn_helix, Deoxyribose operon repressor KHU1_1234 SM01134 KHU1_1234 KHU1_1239 SM00382 ATPases associated with a variety of cellular activities KHU1_1244 SM00966 SpoVT / AbrB like domain KHU1_1245 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KHU1_1245 SM00091 PAS domain KHU1_1245 SM00387 Histidine kinase-like ATPases KHU1_1245 SM00388 His Kinase A (phosphoacceptor) domain KHU1_1249 SM00849 Metallo-beta-lactamase superfamily KHU1_1256 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KHU1_1257 SM00822 KHU1_1257 KHU1_1257 SM00823 Phosphopantetheine attachment site KHU1_1257 SM00825 Beta-ketoacyl synthase KHU1_1257 SM00826 KHU1_1257 KHU1_1257 SM01294 KHU1_1257 KHU1_1258 SM00822 KHU1_1258 KHU1_1258 SM00823 Phosphopantetheine attachment site KHU1_1258 SM00825 Beta-ketoacyl synthase KHU1_1258 SM00826 KHU1_1258 KHU1_1259 SM00822 KHU1_1259 KHU1_1259 SM00823 Phosphopantetheine attachment site KHU1_1259 SM00825 Beta-ketoacyl synthase KHU1_1259 SM01294 KHU1_1259 KHU1_1260 SM00822 KHU1_1260 KHU1_1260 SM00823 Phosphopantetheine attachment site KHU1_1260 SM00825 Beta-ketoacyl synthase KHU1_1260 SM01294 KHU1_1260 KHU1_1261 SM00822 KHU1_1261 KHU1_1261 SM00823 Phosphopantetheine attachment site KHU1_1261 SM00825 Beta-ketoacyl synthase KHU1_1261 SM01294 KHU1_1261 KHU1_1262 SM00822 KHU1_1262 KHU1_1262 SM00823 Phosphopantetheine attachment site KHU1_1262 SM00825 Beta-ketoacyl synthase KHU1_1262 SM01294 KHU1_1262 KHU1_1263 SM00822 KHU1_1263 KHU1_1263 SM00823 Phosphopantetheine attachment site KHU1_1263 SM01294 KHU1_1263 KHU1_1266 SM00861 Transketolase, pyrimidine binding domain KHU1_1280 SM00838 Elongation factor G C-terminus KHU1_1284 SM00670 Large family of predicted nucleotide-binding domains KHU1_1289 SM00878 Biotin carboxylase C-terminal domain KHU1_1298 SM00116 Domain in cystathionine beta-synthase and other proteins. KHU1_1320 SM00740 KHU1_1320 KHU1_1321 SM00740 KHU1_1321 KHU1_1329 SM00842 Cell division protein FtsA KHU1_1330 SM00864 Tubulin/FtsZ family, GTPase domain KHU1_1330 SM00865 Tubulin/FtsZ family, C-terminal domain KHU1_1335 SM00382 ATPases associated with a variety of cellular activities KHU1_1342 SM00363 S4 RNA-binding domain KHU1_1347 SM00363 S4 RNA-binding domain KHU1_1352 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain KHU1_1353 SM00851 MGS-like domain KHU1_1353 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KHU1_1353 SM01209 KHU1_1353 KHU1_1356 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family KHU1_1366 SM00831 Cation transporter/ATPase, N-terminus KHU1_1369 SM00072 Guanylate kinase homologues. KHU1_1370 SM01409 KHU1_1370 KHU1_1377 SM00331 Sigma factor PP2C-like phosphatases KHU1_1377 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KHU1_1378 SM00220 Serine/Threonine protein kinases, catalytic domain KHU1_1378 SM00740 KHU1_1378 KHU1_1381 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain KHU1_1384 SM01120 KHU1_1384 KHU1_1384 SM01121 KHU1_1384 KHU1_1387 SM00487 DEAD-like helicases superfamily KHU1_1387 SM00490 helicase superfamily c-terminal domain KHU1_1390 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KHU1_1391 SM00822 KHU1_1391 KHU1_1393 SM00358 Double-stranded RNA binding motif KHU1_1393 SM00535 Ribonuclease III family KHU1_1394 SM00968 SMC proteins Flexible Hinge Domain KHU1_1395 SM00382 ATPases associated with a variety of cellular activities KHU1_1395 SM00962 SRP54-type protein, GTPase domain KHU1_1395 SM00963 SRP54-type protein, helical bundle domain KHU1_1398 SM00382 ATPases associated with a variety of cellular activities KHU1_1398 SM00962 SRP54-type protein, GTPase domain KHU1_1398 SM00963 SRP54-type protein, helical bundle domain KHU1_1410 SM00881 CoA binding domain KHU1_1412 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KHU1_1412 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KHU1_1412 SM00493 KHU1_1412 KHU1_1416 SM00382 ATPases associated with a variety of cellular activities KHU1_1416 SM01086 C-terminal, D2-small domain, of ClpB protein KHU1_1424 SM00382 ATPases associated with a variety of cellular activities KHU1_1434 SM00448 cheY-homologous receiver domain KHU1_1441 SM00962 SRP54-type protein, GTPase domain KHU1_1443 SM00448 cheY-homologous receiver domain KHU1_1444 SM00073 Histidine Phosphotransfer domain KHU1_1444 SM00260 Two component signalling adaptor domain KHU1_1444 SM00387 Histidine kinase-like ATPases KHU1_1444 SM01231 KHU1_1444 KHU1_1445 SM00260 Two component signalling adaptor domain KHU1_1457 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KHU1_1459 SM00479 KHU1_1459 KHU1_1459 SM00481 DNA polymerase alpha chain like domain KHU1_1461 SM00316 Ribosomal protein S1-like RNA-binding domain KHU1_1461 SM00322 K homology RNA-binding domain KHU1_1468 SM00904 Riboflavin kinase KHU1_1469 SM01387 KHU1_1469 KHU1_1470 SM00316 Ribosomal protein S1-like RNA-binding domain KHU1_1470 SM00322 K homology RNA-binding domain KHU1_1476 SM00859 Semialdehyde dehydrogenase, NAD binding domain KHU1_1478 SM01130 KHU1_1478 KHU1_1479 SM00849 Metallo-beta-lactamase superfamily KHU1_1482 SM00382 ATPases associated with a variety of cellular activities KHU1_1482 SM00843 KHU1_1482 KHU1_1483 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_1483 SM00866 KHU1_1483 KHU1_1485 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_1492 SM00530 Helix-turn-helix XRE-family like proteins KHU1_1494 SM00852 Probable molybdopterin binding domain KHU1_1495 SM00382 ATPases associated with a variety of cellular activities KHU1_1497 SM00322 K homology RNA-binding domain KHU1_1497 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KHU1_1500 SM00829 Enoylreductase KHU1_1502 SM00729 Elongator protein 3, MiaB family, Radical SAM KHU1_1505 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KHU1_1505 SM00534 ATPase domain of DNA mismatch repair MUTS family KHU1_1506 SM00853 MutL C terminal dimerisation domain KHU1_1506 SM01340 KHU1_1506 KHU1_1512 SM00849 Metallo-beta-lactamase superfamily KHU1_1513 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KHU1_1514 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KHU1_1515 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KHU1_1520 SM00822 KHU1_1520 KHU1_1520 SM00823 Phosphopantetheine attachment site KHU1_1520 SM00825 Beta-ketoacyl synthase KHU1_1520 SM00826 KHU1_1520 KHU1_1520 SM01294 KHU1_1520 KHU1_1521 SM00822 KHU1_1521 KHU1_1521 SM00823 Phosphopantetheine attachment site KHU1_1521 SM00825 Beta-ketoacyl synthase KHU1_1521 SM00826 KHU1_1521 KHU1_1521 SM01294 KHU1_1521 KHU1_1522 SM00822 KHU1_1522 KHU1_1522 SM00823 Phosphopantetheine attachment site KHU1_1522 SM00825 Beta-ketoacyl synthase KHU1_1522 SM00826 KHU1_1522 KHU1_1522 SM01294 KHU1_1522 KHU1_1523 SM00822 KHU1_1523 KHU1_1523 SM00823 Phosphopantetheine attachment site KHU1_1523 SM00825 Beta-ketoacyl synthase KHU1_1523 SM00826 KHU1_1523 KHU1_1523 SM01294 KHU1_1523 KHU1_1524 SM00823 Phosphopantetheine attachment site KHU1_1524 SM00825 Beta-ketoacyl synthase KHU1_1524 SM01294 KHU1_1524 KHU1_1547 SM00382 ATPases associated with a variety of cellular activities KHU1_1550 SM00422 helix_turn_helix, mercury resistance KHU1_1551 SM01230 KHU1_1551 KHU1_1562 SM00829 Enoylreductase KHU1_1574 SM00710 Parallel beta-helix repeats KHU1_1581 SM00257 Lysin motif KHU1_1582 SM00857 Resolvase, N terminal domain KHU1_1584 SM00861 Transketolase, pyrimidine binding domain KHU1_1589 SM00448 cheY-homologous receiver domain KHU1_1603 SM01207 KHU1_1603 KHU1_1604 SM00881 CoA binding domain KHU1_1605 SM00387 Histidine kinase-like ATPases KHU1_1605 SM00433 TopoisomeraseII KHU1_1606 SM00434 DNA Topoisomerase IV KHU1_1610 SM00829 Enoylreductase KHU1_1614 SM00354 helix_turn _helix lactose operon repressor KHU1_1621 SM01067 Cellulose binding domain KHU1_1623 SM00387 Histidine kinase-like ATPases KHU1_1623 SM00388 His Kinase A (phosphoacceptor) domain KHU1_1624 SM00448 cheY-homologous receiver domain KHU1_1624 SM00862 Transcriptional regulatory protein, C terminal KHU1_1626 SM00606 Cellulose Binding Domain Type IV KHU1_1627 SM00823 Phosphopantetheine attachment site KHU1_1627 SM00824 Thioesterase KHU1_1628 SM00823 Phosphopantetheine attachment site KHU1_1629 SM00823 Phosphopantetheine attachment site KHU1_1629 SM00825 Beta-ketoacyl synthase KHU1_1630 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KHU1_1631 SM00822 KHU1_1631 KHU1_1632 SM00882 Coenzyme A transferase KHU1_1633 SM00882 Coenzyme A transferase KHU1_1636 SM00729 Elongator protein 3, MiaB family, Radical SAM KHU1_1636 SM00876 Biotin and Thiamin Synthesis associated domain KHU1_1648 SM00878 Biotin carboxylase C-terminal domain KHU1_1655 SM00823 Phosphopantetheine attachment site KHU1_1656 SM00823 Phosphopantetheine attachment site KHU1_1656 SM01294 KHU1_1656 KHU1_1666 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KHU1_1669 SM00829 Enoylreductase KHU1_1673 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KHU1_1676 SM00822 KHU1_1676 KHU1_1682 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KHU1_1685 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_1687 SM00860 SMI1 / KNR4 family KHU1_1690 SM00342 helix_turn_helix, arabinose operon control protein KHU1_1692 SM00849 Metallo-beta-lactamase superfamily KHU1_1694 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KHU1_1701 SM00257 Lysin motif KHU1_1702 SM00341 Helicase and RNase D C-terminal KHU1_1702 SM00487 DEAD-like helicases superfamily KHU1_1702 SM00490 helicase superfamily c-terminal domain KHU1_1702 SM00956 KHU1_1702 KHU1_1717 SM00849 Metallo-beta-lactamase superfamily KHU1_1719 SM00861 Transketolase, pyrimidine binding domain KHU1_1720 SM00327 von Willebrand factor (vWF) type A domain KHU1_1721 SM00382 ATPases associated with a variety of cellular activities KHU1_1723 SM00257 Lysin motif KHU1_1744 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_1744 SM00866 KHU1_1744 KHU1_1745 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KHU1_1745 SM00245 tail specific protease KHU1_1751 SM00014 Acid phosphatase homologues KHU1_1761 SM00882 Coenzyme A transferase KHU1_1762 SM00882 Coenzyme A transferase KHU1_1764 SM00871 Bacterial transcription activator, effector binding domain KHU1_1774 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_1780 SM00382 ATPases associated with a variety of cellular activities KHU1_1789 SM00567 E-Z type HEAT repeats KHU1_1789 SM00932 Scaffold protein Nfu/NifU N terminal KHU1_1790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KHU1_1794 SM00357 Cold shock protein domain KHU1_1802 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs KHU1_1802 SM00475 5'-3' exonuclease KHU1_1819 SM00981 KHU1_1819 KHU1_1824 SM00487 DEAD-like helicases superfamily KHU1_1824 SM00490 helicase superfamily c-terminal domain KHU1_1833 SM00060 Fibronectin type 3 domain KHU1_1835 SM00478 endonuclease III KHU1_1835 SM00525 KHU1_1835 KHU1_1840 SM00479 KHU1_1840 KHU1_1840 SM00487 DEAD-like helicases superfamily KHU1_1840 SM00491 KHU1_1840 KHU1_1848 SM00851 MGS-like domain KHU1_1852 SM00835 Cupin KHU1_1859 SM00914 KHU1_1859 KHU1_1860 SM00028 Tetratricopeptide repeats KHU1_1874 SM00138 Methyltransferase, chemotaxis proteins KHU1_1875 SM00562 KHU1_1875 KHU1_1881 SM00411 bacterial (prokaryotic) histone like domain KHU1_1889 SM00316 Ribosomal protein S1-like RNA-binding domain KHU1_1897 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KHU1_1901 SM00257 Lysin motif KHU1_1903 SM00487 DEAD-like helicases superfamily KHU1_1903 SM00490 helicase superfamily c-terminal domain KHU1_1910 SM00091 PAS domain KHU1_1910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KHU1_1910 SM00387 Histidine kinase-like ATPases KHU1_1910 SM00388 His Kinase A (phosphoacceptor) domain KHU1_1911 SM00448 cheY-homologous receiver domain KHU1_1911 SM00862 Transcriptional regulatory protein, C terminal KHU1_1915 SM00363 S4 RNA-binding domain KHU1_1942 SM00387 Histidine kinase-like ATPases KHU1_1944 SM00936 Penicillin-binding protein 5, C-terminal domain KHU1_1953 SM00919 Malic enzyme, NAD binding domain KHU1_1953 SM01274 KHU1_1953 KHU1_1956 SM00870 KHU1_1956 KHU1_1957 SM00530 Helix-turn-helix XRE-family like proteins KHU1_1976 SM00849 Metallo-beta-lactamase superfamily KHU1_1981 SM00823 Phosphopantetheine attachment site KHU1_1981 SM00825 Beta-ketoacyl synthase KHU1_1981 SM00829 Enoylreductase KHU1_1981 SM01294 KHU1_1981 KHU1_1982 SM00822 KHU1_1982 KHU1_1982 SM00823 Phosphopantetheine attachment site KHU1_1982 SM00825 Beta-ketoacyl synthase KHU1_1982 SM00826 KHU1_1982 KHU1_1983 SM00822 KHU1_1983 KHU1_1983 SM00823 Phosphopantetheine attachment site KHU1_1983 SM00825 Beta-ketoacyl synthase KHU1_1983 SM01294 KHU1_1983 KHU1_1984 SM00822 KHU1_1984 KHU1_1984 SM00823 Phosphopantetheine attachment site KHU1_1984 SM00825 Beta-ketoacyl synthase KHU1_1984 SM00826 KHU1_1984 KHU1_1984 SM01294 KHU1_1984 KHU1_1985 SM00822 KHU1_1985 KHU1_1985 SM00823 Phosphopantetheine attachment site KHU1_1985 SM00825 Beta-ketoacyl synthase KHU1_1985 SM00826 KHU1_1985 KHU1_1985 SM01294 KHU1_1985 KHU1_1987 SM00823 Phosphopantetheine attachment site KHU1_1987 SM00825 Beta-ketoacyl synthase KHU1_1987 SM01294 KHU1_1987 KHU1_1992 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KHU1_1993 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. KHU1_2001 SM01350 KHU1_2001 KHU1_2010 SM00382 ATPases associated with a variety of cellular activities KHU1_2012 SM00062 Bacterial periplasmic substrate-binding proteins KHU1_2012 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. KHU1_2016 SM00046 Diacylglycerol kinase catalytic domain (presumed) KHU1_2018 SM00861 Transketolase, pyrimidine binding domain KHU1_2022 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KHU1_2024 SM00091 PAS domain KHU1_2024 SM00382 ATPases associated with a variety of cellular activities KHU1_2033 SM00646 KHU1_2033 KHU1_2036 SM00530 Helix-turn-helix XRE-family like proteins KHU1_2041 SM01005 Alanine racemase, C-terminal domain KHU1_2042 SM00448 cheY-homologous receiver domain KHU1_2043 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KHU1_2046 SM00363 S4 RNA-binding domain KHU1_2054 SM00878 Biotin carboxylase C-terminal domain KHU1_2063 SM00382 ATPases associated with a variety of cellular activities KHU1_2065 SM00841 Elongation factor P, C-terminal KHU1_2065 SM01185 KHU1_2065 KHU1_2071 SM00529 Helix-turn-helix diphteria tox regulatory element KHU1_2073 SM00450 Rhodanese Homology Domain KHU1_2077 SM00487 DEAD-like helicases superfamily KHU1_2077 SM00490 helicase superfamily c-terminal domain KHU1_2080 SM00530 Helix-turn-helix XRE-family like proteins KHU1_2092 SM00382 ATPases associated with a variety of cellular activities KHU1_2094 SM01091 Transporter associated domain KHU1_2098 SM00849 Metallo-beta-lactamase superfamily KHU1_2101 SM00631 KHU1_2101 KHU1_2109 SM00382 ATPases associated with a variety of cellular activities KHU1_2110 SM00382 ATPases associated with a variety of cellular activities KHU1_2119 SM00257 Lysin motif KHU1_2126 SM00518 AP endonuclease family 2 KHU1_2127 SM00487 DEAD-like helicases superfamily KHU1_2127 SM00490 helicase superfamily c-terminal domain KHU1_2134 SM00400 zinc finger KHU1_2134 SM00493 KHU1_2134 KHU1_2137 SM00116 Domain in cystathionine beta-synthase and other proteins. KHU1_2146 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KHU1_2156 SM00729 Elongator protein 3, MiaB family, Radical SAM KHU1_2159 SM00271 DnaJ molecular chaperone homology domain KHU1_2163 SM00729 Elongator protein 3, MiaB family, Radical SAM KHU1_2164 SM00838 Elongation factor G C-terminus KHU1_2170 SM00849 Metallo-beta-lactamase superfamily KHU1_2172 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KHU1_2176 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KHU1_2178 SM01103 KHU1_2178 KHU1_2192 SM00860 SMI1 / KNR4 family KHU1_2194 SM00342 helix_turn_helix, arabinose operon control protein KHU1_2194 SM00871 Bacterial transcription activator, effector binding domain KHU1_2208 SM00849 Metallo-beta-lactamase superfamily KHU1_2218 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KHU1_2218 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KHU1_2235 SM00732 Likely ribonuclease with RNase H fold. KHU1_2237 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KHU1_2239 SM00382 ATPases associated with a variety of cellular activities KHU1_2240 SM00062 Bacterial periplasmic substrate-binding proteins KHU1_2240 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. KHU1_2245 SM00382 ATPases associated with a variety of cellular activities KHU1_2246 SM00028 Tetratricopeptide repeats KHU1_2250 SM00382 ATPases associated with a variety of cellular activities KHU1_2254 SM00287 Bacterial SH3 domain homologues KHU1_2254 SM00646 KHU1_2254 KHU1_2256 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KHU1_2256 SM00954 Region found in RelA / SpoT proteins KHU1_2266 SM01323 KHU1_2266 KHU1_2270 SM00382 ATPases associated with a variety of cellular activities KHU1_2271 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KHU1_2274 SM00257 Lysin motif KHU1_2283 SM01317 KHU1_2283 KHU1_2302 SM00257 Lysin motif KHU1_2304 SM01004 Delta-aminolevulinic acid dehydratase KHU1_2311 SM00382 ATPases associated with a variety of cellular activities KHU1_2311 SM00464 Found in ATP-dependent protease La (LON) KHU1_2312 SM00382 ATPases associated with a variety of cellular activities KHU1_2313 SM00382 ATPases associated with a variety of cellular activities KHU1_2313 SM00994 ClpX C4-type zinc finger KHU1_2313 SM01086 C-terminal, D2-small domain, of ClpB protein KHU1_2318 SM01329 KHU1_2318 KHU1_2328 SM00909 Sporulation and spore germination KHU1_2330 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_2331 SM00421 helix_turn_helix, Lux Regulon KHU1_2338 SM00465 GIY-YIG type nucleases (URI domain) KHU1_2340 SM00813 Alpha-L-arabinofuranosidase C-terminus KHU1_2341 SM00893 Electron transfer flavoprotein domain KHU1_2342 SM00893 Electron transfer flavoprotein domain KHU1_2348 SM00463 Small MutS-related domain KHU1_2348 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KHU1_2348 SM00534 ATPase domain of DNA mismatch repair MUTS family KHU1_2349 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KHU1_2349 SM00481 DNA polymerase alpha chain like domain KHU1_2349 SM00483 DNA polymerase X family KHU1_2353 SM00873 B3/4 domain KHU1_2353 SM00874 tRNA synthetase B5 domain KHU1_2353 SM00896 Ferredoxin-fold anticodon binding domain KHU1_2355 SM00967 RNA 2'-O ribose methyltransferase substrate binding KHU1_2361 SM00813 Alpha-L-arabinofuranosidase C-terminus KHU1_2367 SM01007 Class II Aldolase and Adducin N-terminal domain KHU1_2379 SM00448 cheY-homologous receiver domain KHU1_2379 SM00850 LytTr DNA-binding domain KHU1_2380 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. KHU1_2380 SM00387 Histidine kinase-like ATPases KHU1_2382 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KHU1_2385 SM00382 ATPases associated with a variety of cellular activities KHU1_2389 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KHU1_2395 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain KHU1_2395 SM01232 KHU1_2395 KHU1_2396 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs KHU1_2396 SM00474 3'-5' exonuclease KHU1_2396 SM00475 5'-3' exonuclease KHU1_2396 SM00482 DNA polymerase A domain KHU1_2397 SM00091 PAS domain KHU1_2397 SM00387 Histidine kinase-like ATPases KHU1_2397 SM00388 His Kinase A (phosphoacceptor) domain KHU1_2398 SM00448 cheY-homologous receiver domain KHU1_2398 SM00862 Transcriptional regulatory protein, C terminal KHU1_2400 SM01329 KHU1_2400 KHU1_2412 SM00919 Malic enzyme, NAD binding domain KHU1_2412 SM01274 KHU1_2412 KHU1_2413 SM00481 DNA polymerase alpha chain like domain KHU1_2419 SM00116 Domain in cystathionine beta-synthase and other proteins. KHU1_2420 SM00849 Metallo-beta-lactamase superfamily KHU1_2424 SM00852 Probable molybdopterin binding domain KHU1_2436 SM00981 KHU1_2436 KHU1_2443 SM00267 diguanylate cyclase KHU1_2445 SM00363 S4 RNA-binding domain KHU1_2445 SM01390 KHU1_2445 KHU1_2447 SM00860 SMI1 / KNR4 family KHU1_2460 SM00363 S4 RNA-binding domain KHU1_2463 SM00116 Domain in cystathionine beta-synthase and other proteins. KHU1_2467 SM00354 helix_turn _helix lactose operon repressor KHU1_2468 SM00830 Chorismate mutase type II KHU1_2473 SM00382 ATPases associated with a variety of cellular activities KHU1_2473 SM00843 KHU1_2473 KHU1_2480 SM00919 Malic enzyme, NAD binding domain KHU1_2480 SM01274 KHU1_2480 KHU1_2481 SM00849 Metallo-beta-lactamase superfamily KHU1_2485 SM00046 Diacylglycerol kinase catalytic domain (presumed) KHU1_2492 SM00382 ATPases associated with a variety of cellular activities KHU1_2493 SM00420 helix_turn_helix, Deoxyribose operon repressor KHU1_2494 SM00363 S4 RNA-binding domain KHU1_2501 SM00354 helix_turn _helix lactose operon repressor KHU1_2507 SM00450 Rhodanese Homology Domain KHU1_2510 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KHU1_2510 SM00091 PAS domain KHU1_2514 SM00382 ATPases associated with a variety of cellular activities KHU1_2515 SM00387 Histidine kinase-like ATPases KHU1_2516 SM00448 cheY-homologous receiver domain KHU1_2516 SM00862 Transcriptional regulatory protein, C terminal KHU1_2518 SM00382 ATPases associated with a variety of cellular activities KHU1_2522 SM00382 ATPases associated with a variety of cellular activities KHU1_2523 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_2525 SM00729 Elongator protein 3, MiaB family, Radical SAM KHU1_2539 SM00382 ATPases associated with a variety of cellular activities KHU1_2546 SM01234 KHU1_2546 KHU1_2547 SM00947 Carbonic anhydrase KHU1_2553 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain KHU1_2562 SM00244 prohibitin homologues KHU1_2571 SM00047 Lysozyme subfamily 2 KHU1_2573 SM00835 Cupin KHU1_2579 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KHU1_2579 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KHU1_2579 SM00319 Homologues of the ligand binding domain of Tar KHU1_2580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KHU1_2580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KHU1_2580 SM00319 Homologues of the ligand binding domain of Tar KHU1_2581 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KHU1_2581 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KHU1_2581 SM00319 Homologues of the ligand binding domain of Tar KHU1_2582 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KHU1_2582 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KHU1_2582 SM00319 Homologues of the ligand binding domain of Tar KHU1_2587 SM00642 Alpha-amylase domain KHU1_2588 SM01091 Transporter associated domain KHU1_2602 SM00316 Ribosomal protein S1-like RNA-binding domain KHU1_2604 SM00344 helix_turn_helix ASNC type KHU1_2608 SM00387 Histidine kinase-like ATPases KHU1_2608 SM00388 His Kinase A (phosphoacceptor) domain KHU1_2609 SM01298 KHU1_2609 KHU1_2610 SM00479 KHU1_2610 KHU1_2615 SM00091 PAS domain KHU1_2615 SM00387 Histidine kinase-like ATPases KHU1_2616 SM00448 cheY-homologous receiver domain KHU1_2618 SM00382 ATPases associated with a variety of cellular activities KHU1_2630 SM00421 helix_turn_helix, Lux Regulon KHU1_2630 SM00448 cheY-homologous receiver domain KHU1_2631 SM00387 Histidine kinase-like ATPases KHU1_2636 SM00052 Putative diguanylate phosphodiesterase KHU1_2644 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KHU1_2653 SM01002 Alanine dehydrogenase/PNT, C-terminal domain KHU1_2653 SM01003 Alanine dehydrogenase/PNT, N-terminal domain KHU1_2655 SM00923 MbtH-like protein KHU1_2656 SM00823 Phosphopantetheine attachment site KHU1_2656 SM00824 Thioesterase KHU1_2660 SM00822 KHU1_2660 KHU1_2674 SM01240 KHU1_2674 KHU1_2677 SM00382 ATPases associated with a variety of cellular activities KHU1_2699 SM00729 Elongator protein 3, MiaB family, Radical SAM KHU1_2714 SM00382 ATPases associated with a variety of cellular activities KHU1_2715 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_2715 SM00866 KHU1_2715 KHU1_2721 SM00422 helix_turn_helix, mercury resistance KHU1_2723 SM00752 Horizontally Transferred TransMembrane Domain KHU1_2726 SM00465 GIY-YIG type nucleases (URI domain) KHU1_2735 SM00382 ATPases associated with a variety of cellular activities KHU1_2739 SM00382 ATPases associated with a variety of cellular activities KHU1_2739 SM00930 KHU1_2739 KHU1_2742 SM00493 KHU1_2742 KHU1_2752 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_2758 SM00382 ATPases associated with a variety of cellular activities KHU1_2761 SM00822 KHU1_2761 KHU1_2763 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KHU1_2764 SM00448 cheY-homologous receiver domain KHU1_2764 SM00862 Transcriptional regulatory protein, C terminal KHU1_2765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KHU1_2765 SM00387 Histidine kinase-like ATPases KHU1_2765 SM00388 His Kinase A (phosphoacceptor) domain KHU1_2772 SM00421 helix_turn_helix, Lux Regulon KHU1_2772 SM00448 cheY-homologous receiver domain KHU1_2773 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KHU1_2773 SM00387 Histidine kinase-like ATPases KHU1_2780 SM00382 ATPases associated with a variety of cellular activities KHU1_2785 SM00387 Histidine kinase-like ATPases KHU1_2785 SM00388 His Kinase A (phosphoacceptor) domain KHU1_2786 SM00448 cheY-homologous receiver domain KHU1_2786 SM00862 Transcriptional regulatory protein, C terminal KHU1_2789 SM00835 Cupin KHU1_2791 SM00382 ATPases associated with a variety of cellular activities KHU1_2802 SM00421 helix_turn_helix, Lux Regulon KHU1_2802 SM00448 cheY-homologous receiver domain KHU1_2804 SM00382 ATPases associated with a variety of cellular activities KHU1_2827 SM00382 ATPases associated with a variety of cellular activities KHU1_2830 SM00062 Bacterial periplasmic substrate-binding proteins KHU1_2831 SM00062 Bacterial periplasmic substrate-binding proteins KHU1_2837 SM00316 Ribosomal protein S1-like RNA-binding domain KHU1_2837 SM00357 Cold shock protein domain KHU1_2837 SM00955 KHU1_2837 KHU1_2840 SM00530 Helix-turn-helix XRE-family like proteins KHU1_2841 SM00530 Helix-turn-helix XRE-family like proteins KHU1_2842 SM00530 Helix-turn-helix XRE-family like proteins KHU1_2844 SM00387 Histidine kinase-like ATPases KHU1_2844 SM00388 His Kinase A (phosphoacceptor) domain KHU1_2845 SM00448 cheY-homologous receiver domain KHU1_2845 SM00862 Transcriptional regulatory protein, C terminal KHU1_2848 SM00382 ATPases associated with a variety of cellular activities KHU1_2852 SM00116 Domain in cystathionine beta-synthase and other proteins. KHU1_2852 SM00382 ATPases associated with a variety of cellular activities KHU1_2857 SM00116 Domain in cystathionine beta-synthase and other proteins. KHU1_2857 SM00382 ATPases associated with a variety of cellular activities KHU1_2871 SM00984 UDP binding domain KHU1_2873 SM01192 KHU1_2873 KHU1_2873 SM01193 KHU1_2873 KHU1_2878 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KHU1_2881 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_2894 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_2894 SM00895 KHU1_2894 KHU1_2913 SM00530 Helix-turn-helix XRE-family like proteins KHU1_2926 SM00640 Glycosyl hydrolases family 32 KHU1_2928 SM00354 helix_turn _helix lactose operon repressor KHU1_2936 SM00947 Carbonic anhydrase KHU1_2947 SM00028 Tetratricopeptide repeats KHU1_2948 SM00387 Histidine kinase-like ATPases KHU1_2948 SM00388 His Kinase A (phosphoacceptor) domain KHU1_2949 SM00448 cheY-homologous receiver domain KHU1_2949 SM00862 Transcriptional regulatory protein, C terminal KHU1_2950 SM00382 ATPases associated with a variety of cellular activities KHU1_2966 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_2966 SM00866 KHU1_2966 KHU1_2974 SM00382 ATPases associated with a variety of cellular activities KHU1_2975 SM00487 DEAD-like helicases superfamily KHU1_2975 SM00490 helicase superfamily c-terminal domain KHU1_2983 SM00382 ATPases associated with a variety of cellular activities KHU1_2984 SM00823 Phosphopantetheine attachment site KHU1_2985 SM00823 Phosphopantetheine attachment site KHU1_2987 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KHU1_2989 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KHU1_2989 SM00245 tail specific protease KHU1_2990 SM00710 Parallel beta-helix repeats KHU1_2992 SM00382 ATPases associated with a variety of cellular activities KHU1_2995 SM00937 KHU1_2995 KHU1_2996 SM00957 SecA DEAD-like domain KHU1_2996 SM00958 SecA preprotein cross-linking domain KHU1_3013 SM00487 DEAD-like helicases superfamily KHU1_3013 SM00490 helicase superfamily c-terminal domain KHU1_3015 SM00421 helix_turn_helix, Lux Regulon KHU1_3015 SM00448 cheY-homologous receiver domain KHU1_3016 SM00387 Histidine kinase-like ATPases KHU1_3024 SM00984 UDP binding domain KHU1_3028 SM00646 KHU1_3028 KHU1_3034 SM00382 ATPases associated with a variety of cellular activities KHU1_3041 SM00047 Lysozyme subfamily 2 KHU1_3041 SM00287 Bacterial SH3 domain homologues KHU1_3052 SM00854 Bacterial capsule synthesis protein PGA_cap KHU1_3058 SM00354 helix_turn _helix lactose operon repressor KHU1_3061 SM00382 ATPases associated with a variety of cellular activities KHU1_3064 SM00287 Bacterial SH3 domain homologues KHU1_3074 SM00903 Flavin reductase like domain KHU1_3076 SM00344 helix_turn_helix ASNC type KHU1_3085 SM00984 UDP binding domain KHU1_3092 SM00487 DEAD-like helicases superfamily KHU1_3092 SM00490 helicase superfamily c-terminal domain KHU1_3094 SM00420 helix_turn_helix, Deoxyribose operon repressor KHU1_3094 SM01134 KHU1_3094 KHU1_3100 SM00028 Tetratricopeptide repeats KHU1_3105 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_3112 SM00938 Nitrogen regulatory protein P-II KHU1_3114 SM00014 Acid phosphatase homologues KHU1_3120 SM00155 Phospholipase D. Active site motifs. KHU1_3129 SM00028 Tetratricopeptide repeats KHU1_3130 SM00729 Elongator protein 3, MiaB family, Radical SAM KHU1_3132 SM00327 von Willebrand factor (vWF) type A domain KHU1_3133 SM00327 von Willebrand factor (vWF) type A domain KHU1_3140 SM00382 ATPases associated with a variety of cellular activities KHU1_3152 SM00226 Low molecular weight phosphatase family KHU1_3160 SM00937 KHU1_3160 KHU1_3164 SM00919 Malic enzyme, NAD binding domain KHU1_3164 SM01274 KHU1_3164 KHU1_3167 SM00357 Cold shock protein domain KHU1_3167 SM00382 ATPases associated with a variety of cellular activities KHU1_3167 SM00959 Rho termination factor, N-terminal domain KHU1_3172 SM00448 cheY-homologous receiver domain KHU1_3177 SM00155 Phospholipase D. Active site motifs. KHU1_3180 SM00382 ATPases associated with a variety of cellular activities KHU1_3181 SM00155 Phospholipase D. Active site motifs. KHU1_3186 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KHU1_3189 SM00100 Cyclic nucleotide-monophosphate binding domain KHU1_3189 SM00419 helix_turn_helix, cAMP Regulatory protein KHU1_3191 SM00836 DALR anticodon binding domain KHU1_3191 SM01016 Arginyl tRNA synthetase N terminal dom KHU1_3196 SM00028 Tetratricopeptide repeats KHU1_3198 SM00530 Helix-turn-helix XRE-family like proteins KHU1_3204 SM00421 helix_turn_helix, Lux Regulon KHU1_3212 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_3215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KHU1_3220 SM00382 ATPases associated with a variety of cellular activities KHU1_3242 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KHU1_3250 SM00858 KHU1_3250 KHU1_3259 SM00986 Uracil DNA glycosylase superfamily KHU1_3259 SM00987 UreE urease accessory protein, C-terminal domain KHU1_3266 SM00640 Glycosyl hydrolases family 32 KHU1_3268 SM01061 CAT RNA binding domain KHU1_3298 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KHU1_3303 SM00954 Region found in RelA / SpoT proteins KHU1_3320 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KHU1_3329 SM01060 KHU1_3329 KHU1_3333 SM00382 ATPases associated with a variety of cellular activities KHU1_3334 SM00382 ATPases associated with a variety of cellular activities KHU1_3339 SM00382 ATPases associated with a variety of cellular activities KHU1_3352 SM01060 KHU1_3352 KHU1_3355 SM01061 CAT RNA binding domain KHU1_3357 SM00487 DEAD-like helicases superfamily KHU1_3357 SM00490 helicase superfamily c-terminal domain KHU1_3367 SM00656 KHU1_3367 KHU1_3385 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain KHU1_3387 SM01133 KHU1_3387 KHU1_3398 SM00382 ATPases associated with a variety of cellular activities KHU1_3399 SM00387 Histidine kinase-like ATPases KHU1_3400 SM00448 cheY-homologous receiver domain KHU1_3400 SM00862 Transcriptional regulatory protein, C terminal KHU1_3401 SM00387 Histidine kinase-like ATPases KHU1_3401 SM00388 His Kinase A (phosphoacceptor) domain KHU1_3402 SM00448 cheY-homologous receiver domain KHU1_3402 SM00862 Transcriptional regulatory protein, C terminal KHU1_3403 SM00382 ATPases associated with a variety of cellular activities KHU1_3407 SM00862 Transcriptional regulatory protein, C terminal KHU1_3409 SM01260 KHU1_3409 KHU1_3410 SM00382 ATPases associated with a variety of cellular activities KHU1_3422 SM00420 helix_turn_helix, Deoxyribose operon repressor KHU1_3422 SM01134 KHU1_3422 KHU1_3425 SM00387 Histidine kinase-like ATPases KHU1_3428 SM00421 helix_turn_helix, Lux Regulon KHU1_3428 SM00448 cheY-homologous receiver domain KHU1_3433 SM00564 beta-propeller repeat KHU1_3445 SM01092 CO dehydrogenase flavoprotein C-terminal domain KHU1_3446 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KHU1_3459 SM00028 Tetratricopeptide repeats KHU1_3464 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KHU1_3465 SM00382 ATPases associated with a variety of cellular activities KHU1_3466 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. KHU1_3467 SM00382 ATPases associated with a variety of cellular activities KHU1_3471 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KHU1_3471 SM00387 Histidine kinase-like ATPases KHU1_3471 SM00388 His Kinase A (phosphoacceptor) domain KHU1_3473 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KHU1_3474 SM00849 Metallo-beta-lactamase superfamily KHU1_3477 SM00091 PAS domain KHU1_3477 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KHU1_3477 SM00387 Histidine kinase-like ATPases KHU1_3477 SM00388 His Kinase A (phosphoacceptor) domain KHU1_3478 SM00448 cheY-homologous receiver domain KHU1_3478 SM00862 Transcriptional regulatory protein, C terminal KHU1_3479 SM00788 Adenylosuccinate synthetase KHU1_3481 SM00382 ATPases associated with a variety of cellular activities KHU1_3492 SM00267 diguanylate cyclase KHU1_3496 SM01131 KHU1_3496 KHU1_3501 SM00640 Glycosyl hydrolases family 32 KHU1_3502 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_3502 SM00895 KHU1_3502 KHU1_3509 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_3511 SM00347 helix_turn_helix multiple antibiotic resistance protein KHU1_3517 SM00345 helix_turn_helix gluconate operon transcriptional repressor KHU1_3523 SM00354 helix_turn _helix lactose operon repressor KHU1_3526 SM00342 helix_turn_helix, arabinose operon control protein KHU1_3531 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KHU1_3536 SM00470 ParB-like nuclease domain KHU1_3538 SM00470 ParB-like nuclease domain KHU1_3540 SM01228 KHU1_3540 KHU1_3542 SM00393 Putative single-stranded nucleic acids-binding domain KHU1_3542 SM01245 KHU1_3542 KHU1_3546 SM00382 ATPases associated with a variety of cellular activities KHU1_3546 SM00760 Bacterial dnaA protein helix-turn-helix domain KHU1_3547 SM00480 DNA polymerase III beta subunit KHU1_3551 SM00387 Histidine kinase-like ATPases KHU1_3551 SM00433 TopoisomeraseII KHU1_3552 SM00434 DNA Topoisomerase IV KHU1_3554 SM00116 Domain in cystathionine beta-synthase and other proteins. KHU1_3554 SM01240 KHU1_3554 KHU1_3555 SM00936 Penicillin-binding protein 5, C-terminal domain KHU1_3562 SM00257 Lysin motif KHU1_3562 SM00636 KHU1_3562 KHU1_3565 SM00382 ATPases associated with a variety of cellular activities KHU1_3567 SM00493 KHU1_3567 KHU1_3581 SM00465 GIY-YIG type nucleases (URI domain) KHU1_3583 SM00966 SpoVT / AbrB like domain KHU1_3586 SM01208 KHU1_3586 KHU1_3587 SM00493 KHU1_3587 KHU1_3588 SM00650 Ribosomal RNA adenine dimethylases KHU1_3597 SM01400 KHU1_3597 KHU1_3601 SM00487 DEAD-like helicases superfamily KHU1_3601 SM00490 helicase superfamily c-terminal domain KHU1_3601 SM00982 KHU1_3601 KHU1_3601 SM01058 CarD-like/TRCF domain KHU1_3602 SM00966 SpoVT / AbrB like domain KHU1_3605 SM00363 S4 RNA-binding domain KHU1_3609 SM00316 Ribosomal protein S1-like RNA-binding domain KHU1_3610 SM00331 Sigma factor PP2C-like phosphatases KHU1_3610 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KHU1_3612 SM00220 Serine/Threonine protein kinases, catalytic domain KHU1_3613 SM00977 TilS substrate C-terminal domain KHU1_3615 SM00382 ATPases associated with a variety of cellular activities KHU1_3624 SM00905 Dihydroneopterin aldolase KHU1_3626 SM00530 Helix-turn-helix XRE-family like proteins KHU1_3632 SM00382 ATPases associated with a variety of cellular activities KHU1_3632 SM01086 C-terminal, D2-small domain, of ClpB protein KHU1_3633 SM00382 ATPases associated with a variety of cellular activities KHU1_3635 SM00670 Large family of predicted nucleotide-binding domains KHU1_3640 SM00840 KHU1_3640 KHU1_3641 SM00535 Ribonuclease III family KHU1_3642 SM00967 RNA 2'-O ribose methyltransferase substrate binding KHU1_3647 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. KHU1_3647 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KHU1_3648 SM00649 Ribosomal protein L11/L12 KHU1_3654 SM00663 RNA polymerase I subunit A N-terminus KHU1_3658 SM00838 Elongation factor G C-terminus KHU1_3658 SM00889 Elongation factor G, domain IV KHU1_3661 SM01403 KHU1_3661 KHU1_3665 SM01382 KHU1_3665 KHU1_3665 SM01383 KHU1_3665 KHU1_3668 SM00322 K homology RNA-binding domain KHU1_3672 SM01374 KHU1_3672 KHU1_3673 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KHU1_3685 SM00316 Ribosomal protein S1-like RNA-binding domain KHU1_3689 SM00662 RNA polymerases D KHU1_3691 SM00382 ATPases associated with a variety of cellular activities KHU1_3692 SM00382 ATPases associated with a variety of cellular activities KHU1_3700 SM00646 KHU1_3700 KHU1_3703 SM01251 KHU1_3703