locus-tag class description XM40_00005 PF14175 YaaC-like Protein XM40_00010 PF00571 CBS domain XM40_00010 PF00478 IMP dehydrogenase / GMP reductase domain XM40_00015 PF07943 Penicillin-binding protein 5, C-terminal domain XM40_00015 PF00768 D-alanyl-D-alanine carboxypeptidase XM40_00020 PF01680 SOR/SNZ family XM40_00025 PF01174 SNO glutamine amidotransferase family XM40_00030 PF02403 Seryl-tRNA synthetase N-terminal domain XM40_00030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XM40_00035 PF02595 Glycerate kinase family XM40_00045 PF01712 Deoxynucleoside kinase XM40_00050 PF01712 Deoxynucleoside kinase XM40_00055 PF00704 Glycosyl hydrolases family 18 XM40_00055 PF01476 LysM domain XM40_00060 PF00857 Isochorismatase family XM40_00065 PF14437 MafB19-like deaminase XM40_00070 PF12169 DNA polymerase III subunits gamma and tau domain III XM40_00075 PF02575 YbaB/EbfC DNA-binding family XM40_00080 PF02132 RecR protein XM40_00080 PF13662 Toprim domain XM40_00085 PF10704 Protein of unknown function (DUF2508) XM40_00090 PF07441 SigmaK-factor processing regulatory protein BofA XM40_00110 PF10764 Inhibitor of sigma-G Gin XM40_00115 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein XM40_00120 PF05816 Toxic anion resistance protein (TelA) XM40_00125 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain XM40_00125 PF01276 Orn/Lys/Arg decarboxylase, major domain XM40_00130 PF02223 Thymidylate kinase XM40_00135 PF06153 Cyclic-di-AMP receptor XM40_00140 PF03885 Protein of unknown function (DUF327) XM40_00145 PF09115 DNA polymerase III, delta subunit, C terminal XM40_00150 PF04468 PSP1 C-terminal conserved region XM40_00155 PF06156 Initiation control protein YabA XM40_00160 PF05175 Methyltransferase small domain XM40_00165 PF01541 GIY-YIG catalytic domain XM40_00170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XM40_00175 PF18277 AbrB C-terminal domain XM40_00175 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin XM40_00180 PF08264 Anticodon-binding domain of tRNA XM40_00180 PF09334 tRNA synthetases class I (M) XM40_00180 PF01588 Putative tRNA binding domain XM40_00185 PF01026 TatD related DNase XM40_00190 PF07501 G5 domain XM40_00190 PF03990 G5-linked-Ubiquitin-like domain XM40_00190 PF06725 3D domain XM40_00195 PF13331 Domain of unknown function (DUF4093) XM40_00195 PF13662 Toprim domain XM40_00200 PF00398 Ribosomal RNA adenine dimethylase XM40_00205 PF05582 YabG peptidase U57 XM40_00210 PF06257 Biofilm formation stimulator VEG XM40_00215 PF00269 Small, acid-soluble spore proteins, alpha/beta type XM40_00220 PF08544 GHMP kinases C terminal XM40_00220 PF00288 GHMP kinases N terminal domain XM40_00225 PF09182 Bacterial purine repressor, N-terminal XM40_00225 PF00156 Phosphoribosyl transferase domain XM40_00230 PF01042 Endoribonuclease L-PSP XM40_00235 PF04026 SpoVG XM40_00240 PF00132 Bacterial transferase hexapeptide (six repeats) XM40_00240 PF00483 Nucleotidyl transferase XM40_00245 PF14572 Phosphoribosyl synthetase-associated domain XM40_00245 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase XM40_00250 PF14693 Ribosomal protein TL5, C-terminal domain XM40_00250 PF01386 Ribosomal L25p family XM40_00255 PF01195 Peptidyl-tRNA hydrolase XM40_00260 PF10955 Protein of unknown function (DUF2757) XM40_00265 PF00270 DEAD/DEAH box helicase XM40_00265 PF00271 Helicase conserved C-terminal domain XM40_00265 PF02559 CarD-like/TRCF domain XM40_00265 PF03461 TRCF domain XM40_00265 PF17757 UvrB interaction domain XM40_00270 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin XM40_00270 PF15714 Stage V sporulation protein T C-terminal, transcription factor XM40_00275 PF01943 Polysaccharide biosynthesis protein XM40_00275 PF14667 Polysaccharide biosynthesis C-terminal domain XM40_00280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XM40_00280 PF03819 MazG nucleotide pyrophosphohydrolase domain XM40_00285 PF01479 S4 domain XM40_00290 PF07873 YabP family XM40_00295 PF09578 Spore cortex protein YabQ (Spore_YabQ) XM40_00300 PF04977 Septum formation initiator XM40_00305 PF00575 S1 RNA binding domain XM40_00320 PF07228 Stage II sporulation protein E (SpoIIE) XM40_00325 PF00092 von Willebrand factor type A domain XM40_00330 PF00069 Protein kinase domain XM40_00335 PF01171 PP-loop family XM40_00335 PF09179 TilS substrate binding domain XM40_00335 PF11734 TilS substrate C-terminal domain XM40_00345 PF01434 Peptidase family M41 XM40_00345 PF06480 FtsH Extracellular XM40_00345 PF17862 AAA+ lid domain XM40_00345 PF00004 ATPase family associated with various cellular activities (AAA) XM40_00350 PF03309 Type III pantothenate kinase XM40_00355 PF01430 Hsp33 protein XM40_00360 PF13145 PPIC-type PPIASE domain XM40_00365 PF00291 Pyridoxal-phosphate dependent enzyme XM40_00370 PF04715 Anthranilate synthase component I, N terminal region XM40_00370 PF00425 chorismate binding enzyme XM40_00375 PF00117 Glutamine amidotransferase class-I XM40_00380 PF01063 Amino-transferase class IV XM40_00385 PF00809 Pterin binding enzyme XM40_00390 PF02152 Dihydroneopterin aldolase XM40_00395 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XM40_00400 PF01381 Helix-turn-helix XM40_00405 PF01207 Dihydrouridine synthase (Dus) XM40_00410 PF01336 OB-fold nucleic acid binding domain XM40_00410 PF00152 tRNA synthetases class II (D, K and N) XM40_00490 PF05848 CtsR N-terminal HTH domain XM40_00490 PF17727 CtsR C-terminal dimerization domain XM40_00495 PF02151 UvrB/uvrC motif XM40_00500 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain XM40_00505 PF00004 ATPase family associated with various cellular activities (AAA) XM40_00505 PF02861 Clp amino terminal domain, pathogenicity island component XM40_00505 PF10431 C-terminal, D2-small domain, of ClpB protein XM40_00505 PF07724 AAA domain (Cdc48 subfamily) XM40_00505 PF17871 AAA lid domain XM40_00510 PF18073 Rubredoxin metal binding domain XM40_00515 PF10635 DisA bacterial checkpoint controller linker region XM40_00515 PF02457 DisA bacterial checkpoint controller nucleotide-binding XM40_00525 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XM40_00530 PF02542 YgbB family XM40_00535 PF00749 tRNA synthetases class I (E and Q), catalytic domain XM40_00540 PF00132 Bacterial transferase hexapeptide (six repeats) XM40_00540 PF06426 Serine acetyltransferase, N-terminal XM40_00545 PF09190 DALR domain XM40_00545 PF01406 tRNA synthetases class I (C) catalytic domain XM40_00550 PF00636 Ribonuclease III domain XM40_00555 PF08032 RNA 2'-O ribose methyltransferase substrate binding XM40_00555 PF00588 SpoU rRNA Methylase family XM40_00560 PF05991 YacP-like NYN domain XM40_00565 PF08281 Sigma-70, region 4 XM40_00565 PF04542 Sigma-70 region 2 XM40_00570 PF00471 Ribosomal protein L33 XM40_00575 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XM40_00580 PF00467 KOW motif XM40_00580 PF02357 Transcription termination factor nusG XM40_00585 PF03946 Ribosomal protein L11, N-terminal domain XM40_00585 PF00298 Ribosomal protein L11, RNA binding domain XM40_00590 PF00687 Ribosomal protein L1p/L10e family XM40_00595 PF00466 Ribosomal protein L10 XM40_00600 PF16320 Ribosomal protein L7/L12 dimerisation domain XM40_00600 PF00542 Ribosomal protein L7/L12 C-terminal domain XM40_00605 PF05175 Methyltransferase small domain XM40_00610 PF04560 RNA polymerase Rpb2, domain 7 XM40_00610 PF00562 RNA polymerase Rpb2, domain 6 XM40_00610 PF10385 RNA polymerase beta subunit external 1 domain XM40_00610 PF04565 RNA polymerase Rpb2, domain 3 XM40_00610 PF04561 RNA polymerase Rpb2, domain 2 XM40_00610 PF04563 RNA polymerase beta subunit XM40_00615 PF00623 RNA polymerase Rpb1, domain 2 XM40_00615 PF04997 RNA polymerase Rpb1, domain 1 XM40_00615 PF04983 RNA polymerase Rpb1, domain 3 XM40_00615 PF05000 RNA polymerase Rpb1, domain 4 XM40_00615 PF04998 RNA polymerase Rpb1, domain 5 XM40_00620 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family XM40_00625 PF00164 Ribosomal protein S12/S23 XM40_00630 PF00177 Ribosomal protein S7p/S5e XM40_00635 PF03144 Elongation factor Tu domain 2 XM40_00635 PF00009 Elongation factor Tu GTP binding domain XM40_00635 PF14492 Elongation Factor G, domain II XM40_00635 PF00679 Elongation factor G C-terminus XM40_00635 PF03764 Elongation factor G, domain IV XM40_00640 PF03143 Elongation factor Tu C-terminal domain XM40_00640 PF00009 Elongation factor Tu GTP binding domain XM40_00640 PF03144 Elongation factor Tu domain 2 XM40_00645 PF12146 Serine aminopeptidase, S33 XM40_00650 PF00338 Ribosomal protein S10p/S20e XM40_00655 PF00297 Ribosomal protein L3 XM40_00660 PF00573 Ribosomal protein L4/L1 family XM40_00665 PF00276 Ribosomal protein L23 XM40_00670 PF03947 Ribosomal Proteins L2, C-terminal domain XM40_00670 PF00181 Ribosomal Proteins L2, RNA binding domain XM40_00675 PF00203 Ribosomal protein S19 XM40_00680 PF00237 Ribosomal protein L22p/L17e XM40_00685 PF00189 Ribosomal protein S3, C-terminal domain XM40_00685 PF07650 KH domain XM40_00690 PF00252 Ribosomal protein L16p/L10e XM40_00695 PF00831 Ribosomal L29 protein XM40_00700 PF00366 Ribosomal protein S17 XM40_00705 PF00238 Ribosomal protein L14p/L23e XM40_00710 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 XM40_00710 PF00467 KOW motif XM40_00715 PF00673 ribosomal L5P family C-terminus XM40_00715 PF00281 Ribosomal protein L5 XM40_00720 PF00410 Ribosomal protein S8 XM40_00725 PF00347 Ribosomal protein L6 XM40_00730 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast XM40_00735 PF03719 Ribosomal protein S5, C-terminal domain XM40_00735 PF00333 Ribosomal protein S5, N-terminal domain XM40_00740 PF00327 Ribosomal protein L30p/L7e XM40_00745 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A XM40_00750 PF00344 SecY translocase XM40_00755 PF05191 Adenylate kinase, active site lid XM40_00760 PF00557 Metallopeptidase family M24 XM40_00765 PF01176 Translation initiation factor 1A / IF-1 XM40_00770 PF00444 Ribosomal protein L36 XM40_00775 PF00416 Ribosomal protein S13/S18 XM40_00780 PF00411 Ribosomal protein S11 XM40_00785 PF01000 RNA polymerase Rpb3/RpoA insert domain XM40_00785 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XM40_00785 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XM40_00790 PF01196 Ribosomal protein L17 XM40_00795 PF00005 ABC transporter XM40_00800 PF00005 ABC transporter XM40_00805 PF02361 Cobalt transport protein XM40_00810 PF01416 tRNA pseudouridine synthase XM40_00815 PF00572 Ribosomal protein L13 XM40_00820 PF00380 Ribosomal protein S9/S16 XM40_00825 PF08241 Methyltransferase domain XM40_00830 PF05163 DinB family XM40_00835 PF10730 Protein of unknown function (DUF2521) XM40_00840 PF01520 N-acetylmuramoyl-L-alanine amidase XM40_00845 PF10609 NUBPL iron-transfer P-loop NTPase XM40_00850 PF17898 Spore germination GerD central core domain XM40_00855 PF14089 KinB-signalling pathway activation in sporulation XM40_00860 PF01522 Polysaccharide deacetylase XM40_00975 PF07690 Major Facilitator Superfamily XM40_00980 PF00202 Aminotransferase class-III XM40_00990 PF00107 Zinc-binding dehydrogenase XM40_00990 PF08240 Alcohol dehydrogenase GroES-like domain XM40_00995 PF00916 Sulfate permease family XM40_00995 PF01740 STAS domain XM40_01000 PF01758 Sodium Bile acid symporter family XM40_01005 PF00756 Putative esterase XM40_01010 PF01032 FecCD transport family XM40_01015 PF01032 FecCD transport family XM40_01020 PF01497 Periplasmic binding protein XM40_01025 PF01497 Periplasmic binding protein XM40_01025 PF12833 Helix-turn-helix domain XM40_01030 PF07075 Protein of unknown function (DUF1343) XM40_01035 PF01915 Glycosyl hydrolase family 3 C-terminal domain XM40_01035 PF00933 Glycosyl hydrolase family 3 N terminal domain XM40_01040 PF00144 Beta-lactamase XM40_01045 PF00367 phosphotransferase system, EIIB XM40_01045 PF02378 Phosphotransferase system, EIIC XM40_01050 PF01380 SIS domain XM40_01060 PF04463 Protein of unknown function (DUF523) XM40_01090 PF08281 Sigma-70, region 4 XM40_01090 PF04542 Sigma-70 region 2 XM40_01095 PF13490 Putative zinc-finger XM40_01100 PF02457 DisA bacterial checkpoint controller nucleotide-binding XM40_01105 PF07949 YbbR-like protein XM40_01110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XM40_01110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XM40_01110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XM40_01110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XM40_01115 PF01380 SIS domain XM40_01120 PF00005 ABC transporter XM40_01130 PF00248 Aldo/keto reductase family XM40_01135 PF04172 LrgB-like family XM40_01140 PF03788 LrgA family XM40_01145 PF01047 MarR family XM40_01150 PF00324 Amino acid permease XM40_01155 PF13419 Haloacid dehalogenase-like hydrolase XM40_01160 PF07730 Histidine kinase XM40_01165 PF00072 Response regulator receiver domain XM40_01165 PF00196 Bacterial regulatory proteins, luxR family XM40_01170 PF00005 ABC transporter XM40_01190 PF16219 Domain of unknown function (DUF4879) XM40_01195 PF17334 Minor curli fiber component A XM40_01210 PF13520 Amino acid permease XM40_01215 PF03009 Glycerophosphoryl diester phosphodiesterase family XM40_01220 PF07690 Major Facilitator Superfamily XM40_01225 PF10852 Protein of unknown function (DUF2651) XM40_01230 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal XM40_01230 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal XM40_01240 PF01471 Putative peptidoglycan binding domain XM40_01240 PF08924 Domain of unknown function (DUF1906) XM40_01255 PF00465 Iron-containing alcohol dehydrogenase XM40_01260 PF02222 ATP-grasp domain XM40_01265 PF01066 CDP-alcohol phosphatidyltransferase XM40_01270 PF09335 SNARE associated Golgi protein XM40_01275 PF02666 Phosphatidylserine decarboxylase XM40_01290 PF00375 Sodium:dicarboxylate symporter family XM40_01295 PF01063 Amino-transferase class IV XM40_01300 PF00324 Amino acid permease XM40_01305 PF02574 Homocysteine S-methyltransferase XM40_01310 PF01235 Sodium:alanine symporter family XM40_01315 PF04960 Glutaminase XM40_01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_01325 PF00072 Response regulator receiver domain XM40_01325 PF08664 YcbB domain XM40_01330 PF01636 Phosphotransferase enzyme family XM40_01335 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein XM40_01340 PF16916 Dimerisation domain of Zinc Transporter XM40_01340 PF01545 Cation efflux family XM40_01345 PF00881 Nitroreductase family XM40_01350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XM40_01355 PF07681 DoxX XM40_01360 PF00085 Thioredoxin XM40_01365 PF10710 Protein of unknown function (DUF2512) XM40_01370 PF07486 Cell Wall Hydrolase XM40_01375 PF16655 PhoD-like phosphatase, N-terminal domain XM40_01375 PF09423 PhoD-like phosphatase XM40_01380 PF02416 mttA/Hcf106 family XM40_01385 PF00902 Sec-independent protein translocase protein (TatC) XM40_01390 PF01470 Pyroglutamyl peptidase XM40_01395 PF00266 Aminotransferase class-V XM40_01400 PF07690 Major Facilitator Superfamily XM40_01405 PF00440 Bacterial regulatory proteins, tetR family XM40_01410 PF17763 Glutaminase/Asparaginase C-terminal domain XM40_01410 PF00710 Asparaginase, N-terminal XM40_01415 PF01674 Lipase (class 2) XM40_01420 PF02810 SEC-C motif XM40_01420 PF05225 helix-turn-helix, Psq domain XM40_01425 PF00248 Aldo/keto reductase family XM40_01430 PF11611 Domain of unknown function (DUF4352) XM40_01430 PF17118 Domain of unknown function (DUF5105) XM40_01435 PF16244 Domain of unknown function (DUF4901) XM40_01440 PF16244 Domain of unknown function (DUF4901) XM40_01445 PF13539 D-alanyl-D-alanine carboxypeptidase XM40_01450 PF18801 response regulator aspartate phosphatase H, N terminal XM40_01460 PF00128 Alpha amylase, catalytic domain XM40_01465 PF01297 Zinc-uptake complex component A periplasmic XM40_01470 PF00005 ABC transporter XM40_01475 PF00950 ABC 3 transport family XM40_01480 PF00296 Luciferase-like monooxygenase XM40_01485 PF02342 TerD domain XM40_01490 PF02342 TerD domain XM40_01495 PF02342 TerD domain XM40_01500 PF03741 Integral membrane protein TerC family XM40_01505 PF14266 Putative component of 'biosynthetic module' XM40_01510 PF05816 Toxic anion resistance protein (TelA) XM40_01515 PF07690 Major Facilitator Superfamily XM40_01520 PF00571 CBS domain XM40_01520 PF00005 ABC transporter XM40_01525 PF00528 Binding-protein-dependent transport system inner membrane component XM40_01530 PF04069 Substrate binding domain of ABC-type glycine betaine transport system XM40_01535 PF07687 Peptidase dimerisation domain XM40_01535 PF01546 Peptidase family M20/M25/M40 XM40_01540 PF03606 C4-dicarboxylate anaerobic carrier XM40_01550 PF00128 Alpha amylase, catalytic domain XM40_01550 PF16738 Starch-binding module 26 XM40_01555 PF00056 lactate/malate dehydrogenase, NAD binding domain XM40_01555 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XM40_01560 PF07690 Major Facilitator Superfamily XM40_01565 PF01047 MarR family XM40_01570 PF01810 LysE type translocator XM40_01575 PF08892 YqcI/YcgG family XM40_01580 PF00324 Amino acid permease XM40_01585 PF09347 Domain of unknown function (DUF1989) XM40_01590 PF02540 NAD synthase XM40_01595 PF12197 Bacillus cereus group antimicrobial protein XM40_01605 PF01261 Xylose isomerase-like TIM barrel XM40_01610 PF07690 Major Facilitator Superfamily XM40_01615 PF01202 Shikimate kinase XM40_01620 PF05448 Acetyl xylan esterase (AXE1) XM40_01625 PF10127 RNA repair pathway DNA polymerase beta family XM40_01630 PF01619 Proline dehydrogenase XM40_01635 PF00171 Aldehyde dehydrogenase family XM40_01640 PF00474 Sodium:solute symporter family XM40_01645 PF13556 PucR C-terminal helix-turn-helix domain XM40_01645 PF17853 GGDEF-like domain XM40_01650 PF07992 Pyridine nucleotide-disulphide oxidoreductase XM40_01655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XM40_01660 PF00355 Rieske [2Fe-2S] domain XM40_01665 PF04324 BFD-like [2Fe-2S] binding domain XM40_01665 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XM40_01665 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XM40_01665 PF07992 Pyridine nucleotide-disulphide oxidoreductase XM40_01665 PF18267 Rubredoxin NAD+ reductase C-terminal domain XM40_01670 PF07683 Cobalamin synthesis protein cobW C-terminal domain XM40_01670 PF02492 CobW/HypB/UreG, nucleotide-binding domain XM40_01675 PF13823 Alcohol dehydrogenase GroES-associated XM40_01675 PF00107 Zinc-binding dehydrogenase XM40_01675 PF08240 Alcohol dehydrogenase GroES-like domain XM40_01680 PF06271 RDD family XM40_01685 PF10925 Protein of unknown function (DUF2680) XM40_01695 PF11033 Competence protein J (ComJ) XM40_01700 PF14040 Deoxyribonuclease NucA/NucB XM40_01705 PF01380 SIS domain XM40_01710 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XM40_01715 PF01638 HxlR-like helix-turn-helix XM40_01720 PF00550 Phosphopantetheine attachment site XM40_01720 PF13193 AMP-binding enzyme C-terminal domain XM40_01720 PF00501 AMP-binding enzyme XM40_01720 PF00668 Condensation domain XM40_01725 PF00501 AMP-binding enzyme XM40_01725 PF13193 AMP-binding enzyme C-terminal domain XM40_01725 PF00668 Condensation domain XM40_01725 PF00550 Phosphopantetheine attachment site XM40_01730 PF00501 AMP-binding enzyme XM40_01730 PF00550 Phosphopantetheine attachment site XM40_01730 PF00975 Thioesterase domain XM40_01730 PF00668 Condensation domain XM40_01730 PF13193 AMP-binding enzyme C-terminal domain XM40_01735 PF00975 Thioesterase domain XM40_01740 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XM40_01740 PF00155 Aminotransferase class I and II XM40_01740 PF07685 CobB/CobQ-like glutamine amidotransferase domain XM40_01745 PF01648 4'-phosphopantetheinyl transferase superfamily XM40_01755 PF00005 ABC transporter XM40_01760 PF00528 Binding-protein-dependent transport system inner membrane component XM40_01765 PF00497 Bacterial extracellular solute-binding proteins, family 3 XM40_01770 PF03466 LysR substrate binding domain XM40_01770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_01775 PF02441 Flavoprotein XM40_01780 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase XM40_01795 PF00854 POT family XM40_01800 PF13229 Right handed beta helix region XM40_01800 PF12708 Pectate lyase superfamily protein XM40_01810 PF03323 Bacillus/Clostridium GerA spore germination protein XM40_01815 PF05504 Spore germination B3/ GerAC like, C-terminal XM40_01820 PF03845 Spore germination protein XM40_01835 PF00497 Bacterial extracellular solute-binding proteins, family 3 XM40_01840 PF00528 Binding-protein-dependent transport system inner membrane component XM40_01845 PF00005 ABC transporter XM40_01855 PF03972 MmgE/PrpD family XM40_01860 PF00005 ABC transporter XM40_01865 PF12704 MacB-like periplasmic core domain XM40_01865 PF02687 FtsX-like permease family XM40_01870 PF00072 Response regulator receiver domain XM40_01870 PF00486 Transcriptional regulatory protein, C terminal XM40_01875 PF00672 HAMP domain XM40_01875 PF00512 His Kinase A (phospho-acceptor) domain XM40_01875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_01880 PF18801 response regulator aspartate phosphatase H, N terminal XM40_01885 PF11131 Rap-phr extracellular signalling XM40_01890 PF13840 ACT domain XM40_01890 PF00696 Amino acid kinase family XM40_01895 PF01032 FecCD transport family XM40_01900 PF01032 FecCD transport family XM40_01905 PF00005 ABC transporter XM40_01910 PF01497 Periplasmic binding protein XM40_01915 PF07690 Major Facilitator Superfamily XM40_01920 PF00440 Bacterial regulatory proteins, tetR family XM40_01925 PF00881 Nitroreductase family XM40_01930 PF03992 Antibiotic biosynthesis monooxygenase XM40_01935 PF01022 Bacterial regulatory protein, arsR family XM40_01940 PF00155 Aminotransferase class I and II XM40_01940 PF00392 Bacterial regulatory proteins, gntR family XM40_01945 PF00202 Aminotransferase class-III XM40_01950 PF00171 Aldehyde dehydrogenase family XM40_01955 PF06800 Sugar transport protein XM40_01965 PF07987 Domain of unkown function (DUF1775) XM40_01970 PF04234 CopC domain XM40_01970 PF05425 Copper resistance protein D XM40_01970 PF13115 YtkA-like XM40_01975 PF08220 DeoR-like helix-turn-helix domain XM40_01975 PF05573 NosL XM40_01985 PF02378 Phosphotransferase system, EIIC XM40_01985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XM40_01990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XM40_01995 PF08125 Mannitol dehydrogenase C-terminal domain XM40_01995 PF01232 Mannitol dehydrogenase Rossmann domain XM40_02000 PF07977 FabA-like domain XM40_02010 PF03746 LamB/YcsF family XM40_02015 PF01566 Natural resistance-associated macrophage protein XM40_02020 PF07286 Protein of unknown function (DUF1445) XM40_02025 PF02682 Carboxyltransferase domain, subdomain C and D XM40_02030 PF02626 Carboxyltransferase domain, subdomain A and B XM40_02035 PF09339 IclR helix-turn-helix domain XM40_02035 PF01614 Bacterial transcriptional regulator XM40_02040 PF13472 GDSL-like Lipase/Acylhydrolase family XM40_02045 PF13129 Protein of unknown function (DUF3953) XM40_02050 PF03992 Antibiotic biosynthesis monooxygenase XM40_02055 PF05223 NTF2-like N-terminal transpeptidase domain XM40_02055 PF03717 Penicillin-binding Protein dimerisation domain XM40_02055 PF00905 Penicillin binding protein transpeptidase domain XM40_02060 PF00248 Aldo/keto reductase family XM40_02065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XM40_02065 PF08279 HTH domain XM40_02065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XM40_02065 PF05043 Mga helix-turn-helix domain XM40_02065 PF00874 PRD domain XM40_02070 PF00501 AMP-binding enzyme XM40_02070 PF13193 AMP-binding enzyme C-terminal domain XM40_02085 PF13302 Acetyltransferase (GNAT) domain XM40_02090 PF16242 Pyridoxamine 5'-phosphate oxidase like XM40_02095 PF10997 Alternate to MurJ XM40_02100 PF12823 Domain of unknown function (DUF3817) XM40_02105 PF01037 Lrp/AsnC ligand binding domain XM40_02110 PF01131 DNA topoisomerase XM40_02110 PF01751 Toprim domain XM40_02120 PF00990 Diguanylate cyclase, GGDEF domain XM40_02125 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) XM40_02135 PF03170 Bacterial cellulose synthase subunit XM40_02140 PF13520 Amino acid permease XM40_02145 PF00293 NUDIX domain XM40_02150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XM40_02150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XM40_02150 PF00205 Thiamine pyrophosphate enzyme, central domain XM40_02180 PF01566 Natural resistance-associated macrophage protein XM40_02195 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) XM40_02200 PF17314 Family of unknown function (DUF5360) XM40_02205 PF00893 Small Multidrug Resistance protein XM40_02210 PF12787 EcsC protein family XM40_02215 PF00477 Small hydrophilic plant seed protein XM40_02215 PF10685 Stress-induced bacterial acidophilic repeat motif XM40_02220 PF07883 Cupin domain XM40_02225 PF16291 Domain of unknown function (DUF4937 XM40_02235 PF03480 Bacterial extracellular solute-binding protein, family 7 XM40_02240 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain XM40_02240 PF17203 Single cache domain 3 XM40_02240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_02245 PF08279 HTH domain XM40_02245 PF00072 Response regulator receiver domain XM40_02250 PF00375 Sodium:dicarboxylate symporter family XM40_02255 PF01594 AI-2E family transporter XM40_02260 PF00005 ABC transporter XM40_02275 PF02770 Acyl-CoA dehydrogenase, middle domain XM40_02275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XM40_02275 PF08028 Acyl-CoA dehydrogenase, C-terminal domain XM40_02285 PF01545 Cation efflux family XM40_02285 PF16916 Dimerisation domain of Zinc Transporter XM40_02290 PF00085 Thioredoxin XM40_02295 PF07478 D-ala D-ala ligase C-terminus XM40_02295 PF01820 D-ala D-ala ligase N-terminus XM40_02300 PF08245 Mur ligase middle domain XM40_02300 PF01225 Mur ligase family, catalytic domain XM40_02300 PF02875 Mur ligase family, glutamate ligase domain XM40_02305 PF00271 Helicase conserved C-terminal domain XM40_02305 PF00270 DEAD/DEAH box helicase XM40_02310 PF03703 Bacterial PH domain XM40_02315 PF03703 Bacterial PH domain XM40_02320 PF01694 Rhomboid family XM40_02325 PF01648 4'-phosphopantetheinyl transferase superfamily XM40_02335 PF00842 Alanine racemase, C-terminal domain XM40_02335 PF01168 Alanine racemase, N-terminal domain XM40_02340 PF01402 Ribbon-helix-helix protein, copG family XM40_02345 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system XM40_02350 PF08678 Rsbr N terminal XM40_02350 PF01740 STAS domain XM40_02355 PF01740 STAS domain XM40_02360 PF13581 Histidine kinase-like ATPase domain XM40_02365 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain XM40_02365 PF07228 Stage II sporulation protein E (SpoIIE) XM40_02370 PF01740 STAS domain XM40_02375 PF13581 Histidine kinase-like ATPase domain XM40_02380 PF04545 Sigma-70, region 4 XM40_02380 PF04542 Sigma-70 region 2 XM40_02380 PF04539 Sigma-70 region 3 XM40_02385 PF07228 Stage II sporulation protein E (SpoIIE) XM40_02390 PF00575 S1 RNA binding domain XM40_02390 PF09371 Tex-like protein N-terminal domain XM40_02390 PF17674 HHH domain XM40_02390 PF16921 Tex protein YqgF-like domain XM40_02395 PF10263 SprT-like family XM40_02435 PF02525 Flavodoxin-like fold XM40_02440 PF00561 alpha/beta hydrolase fold XM40_02445 PF07690 Major Facilitator Superfamily XM40_02450 PF07859 alpha/beta hydrolase fold XM40_02455 PF02566 OsmC-like protein XM40_02460 PF01047 MarR family XM40_02465 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) XM40_02470 PF01575 MaoC like domain XM40_02480 PF02082 Transcriptional regulator XM40_02485 PF13460 NAD(P)H-binding XM40_02490 PF00313 'Cold-shock' DNA-binding domain XM40_02495 PF02583 Metal-sensitive transcriptional repressor XM40_02500 PF13686 DsrE/DsrF/DrsH-like family XM40_02505 PF01206 Sulfurtransferase TusA XM40_02505 PF00581 Rhodanese-like domain XM40_02510 PF00581 Rhodanese-like domain XM40_02510 PF00753 Metallo-beta-lactamase superfamily XM40_02515 PF01206 Sulfurtransferase TusA XM40_02520 PF01925 Sulfite exporter TauE/SafE XM40_02525 PF01177 Asp/Glu/Hydantoin racemase XM40_02540 PF01734 Patatin-like phospholipase XM40_02550 PF00291 Pyridoxal-phosphate dependent enzyme XM40_02555 PF07729 FCD domain XM40_02555 PF00392 Bacterial regulatory proteins, gntR family XM40_02560 PF01042 Endoribonuclease L-PSP XM40_02570 PF07687 Peptidase dimerisation domain XM40_02570 PF01546 Peptidase family M20/M25/M40 XM40_02575 PF02311 AraC-like ligand binding domain XM40_02575 PF12833 Helix-turn-helix domain XM40_02580 PF01546 Peptidase family M20/M25/M40 XM40_02580 PF07687 Peptidase dimerisation domain XM40_02585 PF00155 Aminotransferase class I and II XM40_02585 PF00392 Bacterial regulatory proteins, gntR family XM40_02590 PF07690 Major Facilitator Superfamily XM40_02595 PF00293 NUDIX domain XM40_02610 PF08031 Berberine and berberine like XM40_02610 PF01565 FAD binding domain XM40_02620 PF16916 Dimerisation domain of Zinc Transporter XM40_02620 PF01545 Cation efflux family XM40_02640 PF00701 Dihydrodipicolinate synthetase family XM40_02650 PF04055 Radical SAM superfamily XM40_02665 PF08240 Alcohol dehydrogenase GroES-like domain XM40_02665 PF00107 Zinc-binding dehydrogenase XM40_02670 PF13411 MerR HTH family regulatory protein XM40_02680 PF00155 Aminotransferase class I and II XM40_02680 PF00392 Bacterial regulatory proteins, gntR family XM40_02695 PF07690 Major Facilitator Superfamily XM40_02700 PF16859 Tetracyclin repressor-like, C-terminal domain XM40_02700 PF00440 Bacterial regulatory proteins, tetR family XM40_02705 PF07875 Coat F domain XM40_02715 PF00107 Zinc-binding dehydrogenase XM40_02715 PF13823 Alcohol dehydrogenase GroES-associated XM40_02715 PF08240 Alcohol dehydrogenase GroES-like domain XM40_02720 PF07875 Coat F domain XM40_02735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_02735 PF07730 Histidine kinase XM40_02740 PF00196 Bacterial regulatory proteins, luxR family XM40_02740 PF00072 Response regulator receiver domain XM40_02745 PF03176 MMPL family XM40_02750 PF07722 Peptidase C26 XM40_02760 PF13302 Acetyltransferase (GNAT) domain XM40_02765 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XM40_02765 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XM40_02770 PF00465 Iron-containing alcohol dehydrogenase XM40_02775 PF07690 Major Facilitator Superfamily XM40_02780 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_02780 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_02790 PF01925 Sulfite exporter TauE/SafE XM40_02795 PF00583 Acetyltransferase (GNAT) family XM40_02800 PF13411 MerR HTH family regulatory protein XM40_02800 PF06445 GyrI-like small molecule binding domain XM40_02805 PF00892 EamA-like transporter family XM40_02815 PF08241 Methyltransferase domain XM40_02820 PF00180 Isocitrate/isopropylmalate dehydrogenase XM40_02825 PF00392 Bacterial regulatory proteins, gntR family XM40_02825 PF07729 FCD domain XM40_02830 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase XM40_02845 PF11954 Domain of unknown function (DUF3471) XM40_02845 PF00144 Beta-lactamase XM40_02850 PF07563 Protein of unknown function (DUF1541) XM40_02855 PF07690 Major Facilitator Superfamily XM40_02860 PF07702 UTRA domain XM40_02860 PF00392 Bacterial regulatory proteins, gntR family XM40_02865 PF00392 Bacterial regulatory proteins, gntR family XM40_02865 PF07729 FCD domain XM40_02870 PF07690 Major Facilitator Superfamily XM40_02875 PF00893 Small Multidrug Resistance protein XM40_02880 PF00893 Small Multidrug Resistance protein XM40_02885 PF17934 Tetracyclin repressor-like, C-terminal domain XM40_02885 PF00440 Bacterial regulatory proteins, tetR family XM40_02890 PF13520 Amino acid permease XM40_02900 PF08327 Activator of Hsp90 ATPase homolog 1-like protein XM40_02905 PF08240 Alcohol dehydrogenase GroES-like domain XM40_02905 PF00107 Zinc-binding dehydrogenase XM40_02910 PF00083 Sugar (and other) transporter XM40_02950 PF02769 AIR synthase related protein, C-terminal domain XM40_02950 PF00586 AIR synthase related protein, N-terminal domain XM40_02955 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE XM40_02960 PF00814 Glycoprotease family XM40_02965 PF00583 Acetyltransferase (GNAT) family XM40_02970 PF00814 Glycoprotease family XM40_02975 PF00005 ABC transporter XM40_02975 PF12848 ABC transporter XM40_02975 PF16326 ABC transporter C-terminal domain XM40_02980 PF01967 MoaC family XM40_02985 PF02629 CoA binding domain XM40_02985 PF06971 Putative DNA-binding protein N-terminus XM40_02990 PF02416 mttA/Hcf106 family XM40_02995 PF00902 Sec-independent protein translocase protein (TatC) XM40_03000 PF14146 Domain of unknown function (DUF4305) XM40_03005 PF02517 CPBP intramembrane metalloprotease XM40_03010 PF00166 Chaperonin 10 Kd subunit XM40_03015 PF00118 TCP-1/cpn60 chaperonin family XM40_03020 PF08924 Domain of unknown function (DUF1906) XM40_03020 PF01471 Putative peptidoglycan binding domain XM40_03035 PF13176 Tetratricopeptide repeat XM40_03035 PF00931 NB-ARC domain XM40_03040 PF00107 Zinc-binding dehydrogenase XM40_03040 PF08240 Alcohol dehydrogenase GroES-like domain XM40_03050 PF00294 pfkB family carbohydrate kinase XM40_03055 PF14154 Domain of unknown function (DUF4306) XM40_03060 PF04012 PspA/IM30 family XM40_03065 PF08271 TFIIB zinc-binding XM40_03070 PF04536 TPM domain XM40_03075 PF13421 SPFH domain-Band 7 family XM40_03080 PF01757 Acyltransferase family XM40_03085 PF13739 Deacetylase PdaC XM40_03085 PF11738 Protein of unknown function (DUF3298) XM40_03090 PF08281 Sigma-70, region 4 XM40_03090 PF04542 Sigma-70 region 2 XM40_03095 PF08240 Alcohol dehydrogenase GroES-like domain XM40_03095 PF00107 Zinc-binding dehydrogenase XM40_03100 PF03330 Lytic transglycolase XM40_03105 PF07676 WD40-like Beta Propeller Repeat XM40_03115 PF14169 Cold-inducible protein YdjO XM40_03120 PF00394 Multicopper oxidase XM40_03120 PF07731 Multicopper oxidase XM40_03120 PF07732 Multicopper oxidase XM40_03125 PF00324 Amino acid permease XM40_03130 PF07726 ATPase family associated with various cellular activities (AAA) XM40_03130 PF17863 AAA lid domain XM40_03135 PF01882 Protein of unknown function DUF58 XM40_03140 PF11992 Domain of unknown function (DUF3488) XM40_03140 PF01841 Transglutaminase-like superfamily XM40_03140 PF13559 Domain of unknown function (DUF4129) XM40_03145 PF00117 Glutamine amidotransferase class-I XM40_03145 PF02540 NAD synthase XM40_03145 PF00958 GMP synthase C terminal domain XM40_03150 PF04545 Sigma-70, region 4 XM40_03150 PF04542 Sigma-70 region 2 XM40_03160 PF00860 Permease family XM40_03170 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XM40_03175 PF14044 NETI protein XM40_03180 PF00731 AIR carboxylase XM40_03185 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain XM40_03185 PF02222 ATP-grasp domain XM40_03190 PF00206 Lyase XM40_03190 PF10397 Adenylosuccinate lyase C-terminus XM40_03195 PF01259 SAICAR synthetase XM40_03200 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase XM40_03210 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain XM40_03210 PF00586 AIR synthase related protein, N-terminal domain XM40_03210 PF02769 AIR synthase related protein, C-terminal domain XM40_03215 PF00156 Phosphoribosyl transferase domain XM40_03220 PF02769 AIR synthase related protein, C-terminal domain XM40_03220 PF00586 AIR synthase related protein, N-terminal domain XM40_03225 PF00551 Formyl transferase XM40_03230 PF01808 AICARFT/IMPCHase bienzyme XM40_03230 PF02142 MGS-like domain XM40_03235 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XM40_03235 PF02843 Phosphoribosylglycinamide synthetase, C domain XM40_03235 PF02844 Phosphoribosylglycinamide synthetase, N domain XM40_03240 PF11127 Protein of unknown function (DUF2892) XM40_03245 PF01979 Amidohydrolase family XM40_03245 PF13382 Adenine deaminase C-terminal domain XM40_03250 PF11258 Protein of unknown function (DUF3048) N-terminal domain XM40_03250 PF17479 Protein of unknown function (DUF3048) C-terminal domain XM40_03255 PF01371 Trp repressor protein XM40_03260 PF01645 Conserved region in glutamate synthase XM40_03270 PF01884 PcrB family XM40_03275 PF00580 UvrD/REP helicase N-terminal domain XM40_03275 PF13361 UvrD-like helicase C-terminal domain XM40_03280 PF12826 Helix-hairpin-helix motif XM40_03280 PF00533 BRCA1 C Terminus (BRCT) domain XM40_03280 PF01653 NAD-dependent DNA ligase adenylation domain XM40_03280 PF03120 NAD-dependent DNA ligase OB-fold domain XM40_03280 PF03119 NAD-dependent DNA ligase C4 zinc finger domain XM40_03285 PF07537 CamS sex pheromone cAM373 precursor XM40_03290 PF01636 Phosphotransferase enzyme family XM40_03295 PF02308 MgtC family XM40_03300 PF00474 Sodium:solute symporter family XM40_03305 PF02686 Glu-tRNAGln amidotransferase C subunit XM40_03310 PF01425 Amidase XM40_03315 PF02637 GatB domain XM40_03315 PF02934 GatB/GatE catalytic domain XM40_03320 PF00440 Bacterial regulatory proteins, tetR family XM40_03325 PF00873 AcrB/AcrD/AcrF family XM40_03330 PF00781 Diacylglycerol kinase catalytic domain XM40_03335 PF01938 TRAM domain XM40_03335 PF05958 tRNA (Uracil-5-)-methyltransferase XM40_03345 PF00005 ABC transporter XM40_03365 PF04634 Protein of unknown function, DUF600 XM40_03370 PF04740 LXG domain of WXG superfamily XM40_03375 PF18593 CdiI immunity protein XM40_03380 PF01709 Transcriptional regulator XM40_03390 PF04439 Streptomycin adenylyltransferase XM40_03395 PF11007 Spore coat associated protein JA (CotJA) XM40_03400 PF12652 CotJB protein XM40_03405 PF05067 Manganese containing catalase XM40_03410 PF00583 Acetyltransferase (GNAT) family XM40_03420 PF04239 Protein of unknown function (DUF421) XM40_03425 PF03992 Antibiotic biosynthesis monooxygenase XM40_03430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XM40_03435 PF01740 STAS domain XM40_03435 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain XM40_03440 PF01687 Riboflavin kinase XM40_03445 PF01027 Inhibitor of apoptosis-promoting Bax1 XM40_03455 PF13037 Domain of unknown function (DUF3898) XM40_03455 PF13039 Protein of unknown function (DUF3900) XM40_03460 PF00667 FAD binding domain XM40_03460 PF00067 Cytochrome P450 XM40_03460 PF00175 Oxidoreductase NAD-binding domain XM40_03460 PF00258 Flavodoxin XM40_03470 PF00884 Sulfatase XM40_03475 PF00483 Nucleotidyl transferase XM40_03480 PF16363 GDP-mannose 4,6 dehydratase XM40_03485 PF03407 Nucleotide-diphospho-sugar transferase XM40_03490 PF00535 Glycosyl transferase family 2 XM40_03495 PF03407 Nucleotide-diphospho-sugar transferase XM40_03500 PF07690 Major Facilitator Superfamily XM40_03505 PF13520 Amino acid permease XM40_03510 PF00171 Aldehyde dehydrogenase family XM40_03515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XM40_03525 PF00535 Glycosyl transferase family 2 XM40_03525 PF13181 Tetratricopeptide repeat XM40_03530 PF16326 ABC transporter C-terminal domain XM40_03530 PF00005 ABC transporter XM40_03530 PF12848 ABC transporter XM40_03535 PF13411 MerR HTH family regulatory protein XM40_03540 PF07690 Major Facilitator Superfamily XM40_03545 PF00005 ABC transporter XM40_03545 PF12848 ABC transporter XM40_03550 PF00270 DEAD/DEAH box helicase XM40_03550 PF00271 Helicase conserved C-terminal domain XM40_03560 PF16884 N-terminal domain of oxidoreductase XM40_03560 PF00107 Zinc-binding dehydrogenase XM40_03565 PF11486 Protein of unknown function (DUF3212) XM40_03570 PF11181 Heat induced stress protein YflT XM40_03575 PF00544 Pectate lyase XM40_03580 PF00939 Sodium:sulfate symporter transmembrane region XM40_03600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_03600 PF06580 Histidine kinase XM40_03605 PF00072 Response regulator receiver domain XM40_03605 PF04397 LytTr DNA-binding domain XM40_03615 PF04203 Sortase domain XM40_03620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_03620 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain XM40_03625 PF08279 HTH domain XM40_03625 PF12431 Transcriptional regulator XM40_03625 PF00072 Response regulator receiver domain XM40_03630 PF03401 Tripartite tricarboxylate transporter family receptor XM40_03635 PF03600 Citrate transporter XM40_03640 PF00753 Metallo-beta-lactamase superfamily XM40_03645 PF02898 Nitric oxide synthase, oxygenase domain XM40_03650 PF00708 Acylphosphatase XM40_03655 PF03475 3-alpha domain XM40_03655 PF03473 MOSC domain XM40_03660 PF11588 Protein of unknown function (DUF3243) XM40_03665 PF00557 Metallopeptidase family M24 XM40_03670 PF02378 Phosphotransferase system, EIIC XM40_03670 PF00367 phosphotransferase system, EIIB XM40_03675 PF10787 Uncharacterised protein from bacillus cereus group XM40_03680 PF00884 Sulfatase XM40_03685 PF09350 Domain of unknown function (DUF1992) XM40_03690 PF00011 Hsp20/alpha crystallin family XM40_03695 PF10676 Spore germination protein gerPA/gerPF XM40_03700 PF10676 Spore germination protein gerPA/gerPF XM40_03705 PF00367 phosphotransferase system, EIIB XM40_03705 PF02378 Phosphotransferase system, EIIC XM40_03710 PF16657 Maltogenic Amylase, C-terminal domain XM40_03710 PF00128 Alpha amylase, catalytic domain XM40_03715 PF07702 UTRA domain XM40_03715 PF00392 Bacterial regulatory proteins, gntR family XM40_03720 PF00881 Nitroreductase family XM40_03735 PF02872 5'-nucleotidase, C-terminal domain XM40_03735 PF00149 Calcineurin-like phosphoesterase XM40_03740 PF01965 DJ-1/PfpI family XM40_03745 PF00356 Bacterial regulatory proteins, lacI family XM40_03750 PF08501 Shikimate dehydrogenase substrate binding domain XM40_03750 PF18317 Shikimate 5'-dehydrogenase C-terminal domain XM40_03755 PF01487 Type I 3-dehydroquinase XM40_03760 PF07690 Major Facilitator Superfamily XM40_03765 PF06569 Protein of unknown function (DUF1128) XM40_03770 PF01451 Low molecular weight phosphotyrosine protein phosphatase XM40_03780 PF03631 Virulence factor BrkB XM40_03785 PF07690 Major Facilitator Superfamily XM40_03790 PF01699 Sodium/calcium exchanger protein XM40_03795 PF14167 YfkD-like protein XM40_03800 PF00924 Mechanosensitive ion channel XM40_03805 PF08756 YfkB-like domain XM40_03805 PF04055 Radical SAM superfamily XM40_03815 PF01522 Polysaccharide deacetylase XM40_03820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XM40_03820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XM40_03830 PF01544 CorA-like Mg2+ transporter protein XM40_03835 PF00730 HhH-GPD superfamily base excision DNA repair protein XM40_03840 PF01938 TRAM domain XM40_03840 PF05958 tRNA (Uracil-5-)-methyltransferase XM40_03845 PF14118 YfzA-like protein XM40_03850 PF01207 Dihydrouridine synthase (Dus) XM40_03860 PF00676 Dehydrogenase E1 component XM40_03865 PF02780 Transketolase, C-terminal domain XM40_03865 PF02779 Transketolase, pyrimidine binding domain XM40_03870 PF00364 Biotin-requiring enzyme XM40_03870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XM40_03870 PF02817 e3 binding domain XM40_03875 PF07992 Pyridine nucleotide-disulphide oxidoreductase XM40_03875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XM40_03880 PF01590 GAF domain XM40_03880 PF00158 Sigma-54 interaction domain XM40_03880 PF02954 Bacterial regulatory protein, Fis family XM40_03885 PF08141 Small acid-soluble spore protein H family XM40_03890 PF02056 Family 4 glycosyl hydrolase XM40_03890 PF11975 Family 4 glycosyl hydrolase C-terminal domain XM40_03895 PF01380 SIS domain XM40_03895 PF01418 Helix-turn-helix domain, rpiR family XM40_03900 PF00367 phosphotransferase system, EIIB XM40_03900 PF02378 Phosphotransferase system, EIIC XM40_03905 PF00005 ABC transporter XM40_03905 PF00664 ABC transporter transmembrane region XM40_03910 PF00664 ABC transporter transmembrane region XM40_03910 PF00005 ABC transporter XM40_03915 PF07681 DoxX XM40_03920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XM40_03925 PF01040 UbiA prenyltransferase family XM40_03930 PF10400 Virulence activator alpha C-term XM40_03930 PF03551 Transcriptional regulator PadR-like family XM40_03935 PF02525 Flavodoxin-like fold XM40_03940 PF01757 Acyltransferase family XM40_03945 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XM40_03945 PF00391 PEP-utilising enzyme, mobile domain XM40_03950 PF01337 Barstar (barnase inhibitor) XM40_03955 PF12867 DinB superfamily XM40_03960 PF07690 Major Facilitator Superfamily XM40_03965 PF01047 MarR family XM40_03970 PF03706 Lysylphosphatidylglycerol synthase TM region XM40_03970 PF09924 Uncharacterised conserved protein (DUF2156) XM40_03975 PF02567 Phenazine biosynthesis-like protein XM40_03980 PF00881 Nitroreductase family XM40_03985 PF14151 YfhD-like protein XM40_03990 PF08338 Domain of unknown function (DUF1731) XM40_03990 PF01370 NAD dependent epimerase/dehydratase family XM40_03995 PF02631 RecX family XM40_04000 PF08838 Protein of unknown function (DUF1811) XM40_04005 PF07690 Major Facilitator Superfamily XM40_04010 PF10794 Protein of unknown function (DUF2606) XM40_04015 PF00089 Trypsin XM40_04020 PF08176 Small acid-soluble spore protein K family XM40_04025 PF14043 WVELL protein XM40_04030 PF08239 Bacterial SH3 domain XM40_04035 PF13630 SdpI/YhfL protein family XM40_04040 PF00561 alpha/beta hydrolase fold XM40_04045 PF00535 Glycosyl transferase family 2 XM40_04050 PF09586 Bacterial membrane protein YfhO XM40_04055 PF04307 LexA-binding, inner membrane-associated putative hydrolase XM40_04060 PF00730 HhH-GPD superfamily base excision DNA repair protein XM40_04060 PF14815 NUDIX domain XM40_04075 PF04259 Small, acid-soluble spore protein, gamma-type XM40_04080 PF14182 YgaB-like protein XM40_04085 PF04167 Protein of unknown function (DUF402) XM40_04090 PF00005 ABC transporter XM40_04090 PF00664 ABC transporter transmembrane region XM40_04095 PF06081 Aromatic acid exporter family member 1 XM40_04100 PF00202 Aminotransferase class-III XM40_04105 PF00578 AhpC/TSA family XM40_04110 PF01475 Ferric uptake regulator family XM40_04115 PF11023 Zinc-ribbon containing domain XM40_04120 PF18576 Helix-turn-helix domain XM40_04120 PF14540 Nucleotidyltransferase-like XM40_04225 PF13667 ThiC-associated domain XM40_04225 PF01964 Radical SAM ThiC family XM40_04230 PF01565 FAD binding domain XM40_04230 PF08031 Berberine and berberine like XM40_04235 PF13040 Fur-regulated basic protein B XM40_04240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XM40_04245 PF00528 Binding-protein-dependent transport system inner membrane component XM40_04250 PF12911 N-terminal TM domain of oligopeptide transport permease C XM40_04250 PF00528 Binding-protein-dependent transport system inner membrane component XM40_04255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XM40_04255 PF00005 ABC transporter XM40_04260 PF00005 ABC transporter XM40_04260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XM40_04265 PF00199 Catalase XM40_04265 PF06628 Catalase-related immune-responsive XM40_04275 PF00005 ABC transporter XM40_04280 PF09084 NMT1/THI5 like XM40_04285 PF00528 Binding-protein-dependent transport system inner membrane component XM40_04290 PF00296 Luciferase-like monooxygenase XM40_04295 PF00253 Ribosomal protein S14p/S29e XM40_04305 PF01381 Helix-turn-helix XM40_04320 PF08331 Domain of unknown function (DUF1730) XM40_04325 PF12671 Putative amidase domain XM40_04330 PF00588 SpoU rRNA Methylase family XM40_04335 PF13171 Protein of unknown function (DUF4004) XM40_04340 PF04519 Polymer-forming cytoskeletal XM40_04350 PF06798 PrkA serine protein kinase C-terminal domain XM40_04350 PF08298 PrkA AAA domain XM40_04355 PF04285 Protein of unknown function (DUF444) XM40_04360 PF01047 MarR family XM40_04370 PF07690 Major Facilitator Superfamily XM40_04375 PF03358 NADPH-dependent FMN reductase XM40_04390 PF00392 Bacterial regulatory proteins, gntR family XM40_04395 PF00005 ABC transporter XM40_04400 PF00005 ABC transporter XM40_04405 PF12679 ABC-2 family transporter protein XM40_04410 PF00313 'Cold-shock' DNA-binding domain XM40_04415 PF03180 NLPA lipoprotein XM40_04420 PF07694 5TMR of 5TMR-LYT XM40_04420 PF00990 Diguanylate cyclase, GGDEF domain XM40_04425 PF00375 Sodium:dicarboxylate symporter family XM40_04435 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) XM40_04445 PF07875 Coat F domain XM40_04450 PF00149 Calcineurin-like phosphoesterase XM40_04450 PF00746 LPXTG cell wall anchor motif XM40_04450 PF02872 5'-nucleotidase, C-terminal domain XM40_04450 PF00565 Staphylococcal nuclease homologue XM40_04455 PF04203 Sortase domain XM40_04460 PF00849 RNA pseudouridylate synthase XM40_04460 PF01479 S4 domain XM40_04465 PF17326 Family of unknown function (DUF5365) XM40_04470 PF00571 CBS domain XM40_04475 PF13419 Haloacid dehalogenase-like hydrolase XM40_04480 PF00583 Acetyltransferase (GNAT) family XM40_04480 PF00795 Carbon-nitrogen hydrolase XM40_04485 PF00202 Aminotransferase class-III XM40_04490 PF04309 Glycerol-3-phosphate responsive antiterminator XM40_04495 PF00230 Major intrinsic protein XM40_04500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XM40_04500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XM40_04505 PF01266 FAD dependent oxidoreductase XM40_04505 PF16901 C-terminal domain of alpha-glycerophosphate oxidase XM40_04510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XM40_04510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XM40_04510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XM40_04510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XM40_04525 PF03358 NADPH-dependent FMN reductase XM40_04530 PF14148 YhdB-like protein XM40_04535 PF13028 Protein of unknown function (DUF3889) XM40_04540 PF00877 NlpC/P60 family XM40_04540 PF01476 LysM domain XM40_04545 PF02082 Transcriptional regulator XM40_04550 PF05552 Conserved TM helix XM40_04555 PF04293 SpoVR like protein XM40_04560 PF00245 Alkaline phosphatase XM40_04565 PF01476 LysM domain XM40_04565 PF00877 NlpC/P60 family XM40_04570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_04570 PF03466 LysR substrate binding domain XM40_04575 PF00285 Citrate synthase, C-terminal domain XM40_04585 PF13520 Amino acid permease XM40_04590 PF00209 Sodium:neurotransmitter symporter family XM40_04595 PF17453 Sigma-M inhibitor XM40_04600 PF13791 Sigma factor regulator C-terminal XM40_04600 PF13800 Sigma factor regulator N-terminal XM40_04605 PF08281 Sigma-70, region 4 XM40_04605 PF04542 Sigma-70 region 2 XM40_04610 PF01553 Acyltransferase XM40_04615 PF03471 Transporter associated domain XM40_04615 PF01595 Cyclin M transmembrane N-terminal domain XM40_04615 PF00571 CBS domain XM40_04620 PF13411 MerR HTH family regulatory protein XM40_04625 PF00155 Aminotransferase class I and II XM40_04630 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_04630 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_04635 PF01595 Cyclin M transmembrane N-terminal domain XM40_04635 PF03471 Transporter associated domain XM40_04635 PF00571 CBS domain XM40_04640 PF02537 CrcB-like protein, Camphor Resistance (CrcB) XM40_04645 PF02537 CrcB-like protein, Camphor Resistance (CrcB) XM40_04650 PF03009 Glycerophosphoryl diester phosphodiesterase family XM40_04655 PF00924 Mechanosensitive ion channel XM40_04660 PF02146 Sir2 family XM40_04665 PF01522 Polysaccharide deacetylase XM40_04670 PF01063 Amino-transferase class IV XM40_04675 PF13977 BetI-type transcriptional repressor, C-terminal XM40_04675 PF00440 Bacterial regulatory proteins, tetR family XM40_04685 PF00582 Universal stress protein family XM40_04690 PF00005 ABC transporter XM40_04690 PF00664 ABC transporter transmembrane region XM40_04695 PF00664 ABC transporter transmembrane region XM40_04695 PF00005 ABC transporter XM40_04700 PF13460 NAD(P)H-binding XM40_04705 PF00269 Small, acid-soluble spore proteins, alpha/beta type XM40_04710 PF17277 Family of unknown function (DUF5342) XM40_04715 PF14398 YheC/D like ATP-grasp XM40_04720 PF14398 YheC/D like ATP-grasp XM40_04725 PF04286 Protein of unknown function (DUF445) XM40_04730 PF06133 Control of competence regulator ComK, YlbF/YmcA XM40_04735 PF08713 DNA alkylation repair enzyme XM40_04745 PF04055 Radical SAM superfamily XM40_04750 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) XM40_04755 PF00999 Sodium/hydrogen exchanger family XM40_04760 PF02080 TrkA-C domain XM40_04770 PF00378 Enoyl-CoA hydratase/isomerase XM40_04775 PF14120 YhzD-like protein XM40_04780 PF00005 ABC transporter XM40_04780 PF13732 Domain of unknown function (DUF4162) XM40_04790 PF00149 Calcineurin-like phosphoesterase XM40_04795 PF13514 AAA domain XM40_04800 PF01966 HD domain XM40_04805 PF14147 Sporulation protein YhaL XM40_04815 PF09680 Family of unknown function XM40_04820 PF09680 Family of unknown function XM40_04830 PF11667 Putative zincin peptidase XM40_04835 PF08963 Protein of unknown function (DUF1878) XM40_04840 PF01047 MarR family XM40_04845 PF12732 YtxH-like protein XM40_04855 PF17099 Tryptophan transporter TrpP XM40_04860 PF00266 Aminotransferase class-V XM40_04865 PF01230 HIT domain XM40_04870 PF00005 ABC transporter XM40_04875 PF05975 Bacterial ABC transporter protein EcsB XM40_04880 PF12787 EcsC protein family XM40_04885 PF01546 Peptidase family M20/M25/M40 XM40_04885 PF07687 Peptidase dimerisation domain XM40_04895 PF03992 Antibiotic biosynthesis monooxygenase XM40_04900 PF00912 Transglycosylase XM40_04900 PF00905 Penicillin binding protein transpeptidase domain XM40_04905 PF01208 Uroporphyrinogen decarboxylase (URO-D) XM40_04920 PF00440 Bacterial regulatory proteins, tetR family XM40_04920 PF17932 Tetracyclin repressor-like, C-terminal domain XM40_04930 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XM40_04930 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XM40_04940 PF05343 M42 glutamyl aminopeptidase XM40_04945 PF00375 Sodium:dicarboxylate symporter family XM40_04950 PF12706 Beta-lactamase superfamily domain XM40_04955 PF10437 Bacterial lipoate protein ligase C-terminus XM40_04955 PF03099 Biotin/lipoate A/B protein ligase family XM40_04960 PF13460 NAD(P)H-binding XM40_04965 PF13193 AMP-binding enzyme C-terminal domain XM40_04965 PF00501 AMP-binding enzyme XM40_04975 PF01435 Peptidase family M48 XM40_04975 PF16491 CAAX prenyl protease N-terminal, five membrane helices XM40_04980 PF00082 Subtilase family XM40_04980 PF05922 Peptidase inhibitor I9 XM40_04995 PF00300 Histidine phosphatase superfamily (branch 1) XM40_05000 PF02803 Thiolase, C-terminal domain XM40_05000 PF00108 Thiolase, N-terminal domain XM40_05005 PF00501 AMP-binding enzyme XM40_05005 PF13193 AMP-binding enzyme C-terminal domain XM40_05010 PF02632 BioY family XM40_05015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XM40_05020 PF01266 FAD dependent oxidoreductase XM40_05020 PF00355 Rieske [2Fe-2S] domain XM40_05030 PF08858 IDEAL domain XM40_05035 PF06338 ComK protein XM40_05045 PF08818 Domain of unknown function (DU1801) XM40_05050 PF15493 Domain of unknown function, YrpD XM40_05055 PF05901 Excalibur calcium-binding domain XM40_05060 PF01906 Putative heavy-metal-binding XM40_05065 PF00474 Sodium:solute symporter family XM40_05070 PF11755 Protein of unknown function (DUF3311) XM40_05080 PF09335 SNARE associated Golgi protein XM40_05085 PF10502 Signal peptidase, peptidase S26 XM40_05090 PF01494 FAD binding domain XM40_05095 PF01047 MarR family XM40_05100 PF05145 Transition state regulatory protein AbrB XM40_05105 PF07690 Major Facilitator Superfamily XM40_05110 PF08361 MAATS-type transcriptional repressor, C-terminal region XM40_05110 PF00440 Bacterial regulatory proteins, tetR family XM40_05115 PF02915 Rubrerythrin XM40_05120 PF04239 Protein of unknown function (DUF421) XM40_05125 PF13361 UvrD-like helicase C-terminal domain XM40_05125 PF12705 PD-(D/E)XK nuclease superfamily XM40_05130 PF00580 UvrD/REP helicase N-terminal domain XM40_05130 PF13361 UvrD-like helicase C-terminal domain XM40_05130 PF12705 PD-(D/E)XK nuclease superfamily XM40_05135 PF00149 Calcineurin-like phosphoesterase XM40_05135 PF12320 Type 5 capsule protein repressor C-terminal domain XM40_05140 PF13476 AAA domain XM40_05150 PF10676 Spore germination protein gerPA/gerPF XM40_05155 PF10970 Spore germination protein GerPE XM40_05165 PF10737 Spore germination protein GerPC XM40_05170 PF10803 Spore germination GerPB XM40_05175 PF10676 Spore germination protein gerPA/gerPF XM40_05180 PF09388 Spo0E like sporulation regulatory protein XM40_05185 PF01557 Fumarylacetoacetate (FAA) hydrolase family XM40_05190 PF07457 Protein of unknown function (DUF1516) XM40_05200 PF10949 Protein of unknown function (DUF2777) XM40_05205 PF13537 Glutamine amidotransferase domain XM40_05205 PF00733 Asparagine synthase XM40_05215 PF01554 MatE XM40_05220 PF02311 AraC-like ligand binding domain XM40_05220 PF12833 Helix-turn-helix domain XM40_05225 PF00356 Bacterial regulatory proteins, lacI family XM40_05230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XM40_05230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XM40_05235 PF05163 DinB family XM40_05240 PF13599 Pentapeptide repeats (9 copies) XM40_05245 PF13673 Acetyltransferase (GNAT) domain XM40_05250 PF02574 Homocysteine S-methyltransferase XM40_05250 PF02219 Methylenetetrahydrofolate reductase XM40_05255 PF04461 Protein of unknown function (DUF520) XM40_05260 PF17783 CvfB-like winged helix domain XM40_05260 PF13509 S1 domain XM40_05270 PF12729 Four helix bundle sensory module for signal transduction XM40_05270 PF00672 HAMP domain XM40_05270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XM40_05275 PF02645 Uncharacterised protein, DegV family COG1307 XM40_05280 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XM40_05280 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XM40_05285 PF12690 Intracellular proteinase inhibitor XM40_05290 PF12758 Protein of unknown function (DUF3813) XM40_05300 PF00326 Prolyl oligopeptidase family XM40_05305 PF01883 Iron-sulfur cluster assembly protein XM40_05310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XM40_05315 PF01565 FAD binding domain XM40_05320 PF07690 Major Facilitator Superfamily XM40_05325 PF02774 Semialdehyde dehydrogenase, dimerisation domain XM40_05325 PF01118 Semialdehyde dehydrogenase, NAD binding domain XM40_05330 PF01960 ArgJ family XM40_05335 PF00696 Amino acid kinase family XM40_05340 PF00202 Aminotransferase class-III XM40_05345 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XM40_05345 PF00117 Glutamine amidotransferase class-I XM40_05350 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XM40_05350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XM40_05355 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XM40_05355 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XM40_05360 PF14168 YjzC-like protein XM40_05365 PF11151 Protein of unknown function (DUF2929) XM40_05385 PF02608 ABC transporter substrate-binding protein PnrA-like XM40_05390 PF10815 ComZ XM40_05400 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XM40_05400 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XM40_05405 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_05405 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_05410 PF10026 Predicted Zn-dependent protease (DUF2268) XM40_05415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XM40_05415 PF00005 ABC transporter XM40_05420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XM40_05420 PF00005 ABC transporter XM40_05425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XM40_05430 PF00528 Binding-protein-dependent transport system inner membrane component XM40_05435 PF00528 Binding-protein-dependent transport system inner membrane component XM40_05435 PF12911 N-terminal TM domain of oligopeptide transport permease C XM40_05450 PF12227 Protein of unknown function (DUF3603) XM40_05455 PF00579 tRNA synthetases class I (W and Y) XM40_05460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XM40_05465 PF00528 Binding-protein-dependent transport system inner membrane component XM40_05470 PF00528 Binding-protein-dependent transport system inner membrane component XM40_05470 PF12911 N-terminal TM domain of oligopeptide transport permease C XM40_05475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XM40_05475 PF00005 ABC transporter XM40_05480 PF00005 ABC transporter XM40_05480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XM40_05490 PF13508 Acetyltransferase (GNAT) domain XM40_05495 PF03960 ArsC family XM40_05500 PF03741 Integral membrane protein TerC family XM40_05505 PF05389 Negative regulator of genetic competence (MecA) XM40_05510 PF06054 Competence protein CoiA-like family XM40_05515 PF08439 Oligopeptidase F XM40_05515 PF01432 Peptidase family M3 XM40_05530 PF01152 Bacterial-like globin XM40_05535 PF01464 Transglycosylase SLT domain XM40_05540 PF01928 CYTH domain XM40_05550 PF04607 Region found in RelA / SpoT proteins XM40_05555 PF01513 ATP-NAD kinase XM40_05560 PF00849 RNA pseudouridylate synthase XM40_05565 PF00149 Calcineurin-like phosphoesterase XM40_05570 PF02080 TrkA-C domain XM40_05570 PF02254 TrkA-N domain XM40_05570 PF00999 Sodium/hydrogen exchanger family XM40_05575 PF03070 TENA/THI-4/PQQC family XM40_05580 PF02581 Thiamine monophosphate synthase XM40_05585 PF01266 FAD dependent oxidoreductase XM40_05590 PF02597 ThiS family XM40_05595 PF05690 Thiazole biosynthesis protein ThiG XM40_05600 PF00899 ThiF family XM40_05605 PF08543 Phosphomethylpyrimidine kinase XM40_05615 PF14153 Spore coat protein CotO XM40_05620 PF10612 Spore coat protein Z XM40_05625 PF10612 Spore coat protein Z XM40_05630 PF07552 Spore Coat Protein X and V domain XM40_05640 PF07552 Spore Coat Protein X and V domain XM40_05645 PF07098 Protein of unknown function (DUF1360) XM40_05660 PF14069 Stage VI sporulation protein F XM40_05665 PF13361 UvrD-like helicase C-terminal domain XM40_05665 PF00580 UvrD/REP helicase N-terminal domain XM40_05675 PF00753 Metallo-beta-lactamase superfamily XM40_05685 PF00005 ABC transporter XM40_05695 PF13673 Acetyltransferase (GNAT) domain XM40_05705 PF00756 Putative esterase XM40_05710 PF01053 Cys/Met metabolism PLP-dependent enzyme XM40_05715 PF01053 Cys/Met metabolism PLP-dependent enzyme XM40_05725 PF18593 CdiI immunity protein XM40_05730 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH XM40_05730 PF04740 LXG domain of WXG superfamily XM40_05740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XM40_05750 PF03992 Antibiotic biosynthesis monooxygenase XM40_05755 PF07690 Major Facilitator Superfamily XM40_05760 PF01047 MarR family XM40_05765 PF07745 Glycosyl hydrolase family 53 XM40_05770 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain XM40_05770 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain XM40_05775 PF16363 GDP-mannose 4,6 dehydratase XM40_05780 PF10509 Galactokinase galactose-binding signature XM40_05780 PF08544 GHMP kinases C terminal XM40_05780 PF00288 GHMP kinases N terminal domain XM40_05785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XM40_05785 PF02378 Phosphotransferase system, EIIC XM40_05790 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit XM40_05795 PF00232 Glycosyl hydrolase family 1 XM40_05800 PF00455 DeoR C terminal sensor domain XM40_05800 PF08220 DeoR-like helix-turn-helix domain XM40_05820 PF02308 MgtC family XM40_05825 PF10990 Protein of unknown function (DUF2809) XM40_05830 PF14172 Domain of unknown function (DUF4309) XM40_05835 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XM40_05835 PF01568 Molydopterin dinucleotide binding domain XM40_05835 PF00384 Molybdopterin oxidoreductase XM40_05835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XM40_05835 PF12838 4Fe-4S dicluster domain XM40_05840 PF07849 Protein of unknown function (DUF1641) XM40_05845 PF00067 Cytochrome P450 XM40_05850 PF04101 Glycosyltransferase family 28 C-terminal domain XM40_05860 PF02602 Uroporphyrinogen-III synthase HemD XM40_05865 PF03649 Uncharacterised protein family (UPF0014) XM40_05870 PF00005 ABC transporter XM40_05875 PF13536 Putative multidrug resistance efflux transporter XM40_05885 PF07849 Protein of unknown function (DUF1641) XM40_05890 PF07992 Pyridine nucleotide-disulphide oxidoreductase XM40_05895 PF02614 Glucuronate isomerase XM40_05905 PF00356 Bacterial regulatory proteins, lacI family XM40_05915 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus XM40_05915 PF08666 SAF domain XM40_05920 PF00072 Response regulator receiver domain XM40_05920 PF00486 Transcriptional regulatory protein, C terminal XM40_05925 PF00512 His Kinase A (phospho-acceptor) domain XM40_05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_05925 PF00672 HAMP domain XM40_05930 PF00005 ABC transporter XM40_05945 PF07730 Histidine kinase XM40_05945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_05950 PF00072 Response regulator receiver domain XM40_05950 PF00196 Bacterial regulatory proteins, luxR family XM40_05965 PF00005 ABC transporter XM40_05965 PF03412 Peptidase C39 family XM40_05965 PF00664 ABC transporter transmembrane region XM40_05970 PF13575 Domain of unknown function (DUF4135) XM40_05970 PF05147 Lanthionine synthetase C-like protein XM40_05975 PF01925 Sulfite exporter TauE/SafE XM40_05980 PF05163 DinB family XM40_05985 PF18801 response regulator aspartate phosphatase H, N terminal XM40_05995 PF01510 N-acetylmuramoyl-L-alanine amidase XM40_05995 PF01476 LysM domain XM40_05995 PF01471 Putative peptidoglycan binding domain XM40_06000 PF08000 Bacterial PH domain XM40_06005 PF05908 Poly-gamma-glutamate hydrolase XM40_06010 PF06114 IrrE N-terminal-like domain XM40_06015 PF01381 Helix-turn-helix XM40_06030 PF01695 IstB-like ATP binding protein XM40_06040 PF17356 Phage-like element PBSX protein XtrA XM40_06045 PF08281 Sigma-70, region 4 XM40_06050 PF03592 Terminase small subunit XM40_06050 PF10668 Phage terminase small subunit XM40_06055 PF04466 Phage terminase large subunit XM40_06055 PF17288 Terminase RNAseH like domain XM40_06060 PF04860 Phage portal protein XM40_06065 PF14550 Putative phage serine protease XkdF XM40_06070 PF05065 Phage capsid family XM40_06075 PF11436 Protein of unknown function (DUF3199) XM40_06080 PF12206 Domain of unknown function (DUF3599) XM40_06085 PF04883 Bacteriophage HK97-gp10, putative tail-component XM40_06100 PF04984 Phage tail sheath protein subtilisin-like domain XM40_06100 PF17482 Phage tail sheath C-terminal domain XM40_06100 PF17481 Phage tail sheath protein beta-sandwich domain XM40_06105 PF09393 Phage tail tube protein XM40_06110 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC XM40_06115 PF01464 Transglycosylase SLT domain XM40_06115 PF01464 Transglycosylase SLT domain XM40_06115 PF01464 Transglycosylase SLT domain XM40_06120 PF01476 LysM domain XM40_06130 PF10844 Protein of unknown function (DUF2577) XM40_06135 PF10934 Protein of unknown function (DUF2634) XM40_06140 PF04865 Baseplate J-like protein XM40_06145 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) XM40_06165 PF09693 Phage uncharacterised protein (Phage_XkdX) XM40_06175 PF10779 Haemolysin XhlA XM40_06180 PF04688 SPP1 phage holin XM40_06185 PF01471 Putative peptidoglycan binding domain XM40_06185 PF01476 LysM domain XM40_06185 PF01510 N-acetylmuramoyl-L-alanine amidase XM40_06190 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system XM40_06195 PF14171 Toxin SpoIISA, type II toxin-antitoxin system XM40_06200 PF01384 Phosphate transporter family XM40_06205 PF01865 Protein of unknown function DUF47 XM40_06210 PF13520 Amino acid permease XM40_06215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XM40_06220 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase XM40_06225 PF00535 Glycosyl transferase family 2 XM40_06230 PF13180 PDZ domain XM40_06235 PF07690 Major Facilitator Superfamily XM40_06240 PF04951 D-aminopeptidase XM40_06245 PF00528 Binding-protein-dependent transport system inner membrane component XM40_06250 PF00528 Binding-protein-dependent transport system inner membrane component XM40_06250 PF12911 N-terminal TM domain of oligopeptide transport permease C XM40_06255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XM40_06255 PF00005 ABC transporter XM40_06260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XM40_06265 PF02016 LD-carboxypeptidase N-terminal domain XM40_06265 PF17676 LD-carboxypeptidase C-terminal domain XM40_06270 PF13378 Enolase C-terminal domain-like XM40_06270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XM40_06275 PF00877 NlpC/P60 family XM40_06280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XM40_06280 PF00005 ABC transporter XM40_06285 PF10282 Lactonase, 7-bladed beta-propeller XM40_06295 PF03061 Thioesterase superfamily XM40_06300 PF13302 Acetyltransferase (GNAT) domain XM40_06305 PF00893 Small Multidrug Resistance protein XM40_06310 PF00893 Small Multidrug Resistance protein XM40_06315 PF00551 Formyl transferase XM40_06315 PF01842 ACT domain XM40_06320 PF00696 Amino acid kinase family XM40_06320 PF01472 PUA domain XM40_06325 PF00171 Aldehyde dehydrogenase family XM40_06330 PF02566 OsmC-like protein XM40_06335 PF01047 MarR family XM40_06340 PF02566 OsmC-like protein XM40_06355 PF00535 Glycosyl transferase family 2 XM40_06355 PF13181 Tetratricopeptide repeat XM40_06365 PF12832 MFS_1 like family XM40_06370 PF00027 Cyclic nucleotide-binding domain XM40_06375 PF01717 Cobalamin-independent synthase, Catalytic domain XM40_06375 PF08267 Cobalamin-independent synthase, N-terminal domain XM40_06380 PF00082 Subtilase family XM40_06385 PF01740 STAS domain XM40_06390 PF02361 Cobalt transport protein XM40_06395 PF00005 ABC transporter XM40_06400 PF09819 ABC-type cobalt transport system, permease component XM40_06405 PF00704 Glycosyl hydrolases family 18 XM40_06405 PF01476 LysM domain XM40_06410 PF03448 MgtE intracellular N domain XM40_06410 PF01769 Divalent cation transporter XM40_06410 PF00571 CBS domain XM40_06415 PF13411 MerR HTH family regulatory protein XM40_06425 PF01047 MarR family XM40_06435 PF01068 ATP dependent DNA ligase domain XM40_06440 PF02735 Ku70/Ku80 beta-barrel domain XM40_06450 PF09335 SNARE associated Golgi protein XM40_06455 PF03741 Integral membrane protein TerC family XM40_06460 PF04542 Sigma-70 region 2 XM40_06465 PF12791 Anti-sigma factor N-terminus XM40_06470 PF00269 Small, acid-soluble spore proteins, alpha/beta type XM40_06475 PF08876 Domain of unknown function (DUF1836) XM40_06480 PF01435 Peptidase family M48 XM40_06485 PF02386 Cation transport protein XM40_06490 PF04239 Protein of unknown function (DUF421) XM40_06495 PF01757 Acyltransferase family XM40_06500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_06500 PF13188 PAS domain XM40_06500 PF00512 His Kinase A (phospho-acceptor) domain XM40_06500 PF00989 PAS fold XM40_06500 PF13426 PAS domain XM40_06505 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XM40_06505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XM40_06510 PF01008 Initiation factor 2 subunit family XM40_06515 PF01636 Phosphotransferase enzyme family XM40_06520 PF00795 Carbon-nitrogen hydrolase XM40_06525 PF00155 Aminotransferase class I and II XM40_06530 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain XM40_06530 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain XM40_06540 PF00596 Class II Aldolase and Adducin N-terminal domain XM40_06545 PF03079 ARD/ARD' family XM40_06550 PF09388 Spo0E like sporulation regulatory protein XM40_06555 PF02743 Cache domain XM40_06555 PF00512 His Kinase A (phospho-acceptor) domain XM40_06555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_06560 PF01047 MarR family XM40_06565 PF13677 Membrane MotB of proton-channel complex MotA/MotB XM40_06565 PF00691 OmpA family XM40_06570 PF01618 MotA/TolQ/ExbB proton channel family XM40_06575 PF00004 ATPase family associated with various cellular activities (AAA) XM40_06575 PF07724 AAA domain (Cdc48 subfamily) XM40_06575 PF10431 C-terminal, D2-small domain, of ClpB protein XM40_06575 PF17871 AAA lid domain XM40_06595 PF06508 Queuosine biosynthesis protein QueC XM40_06600 PF01242 6-pyruvoyl tetrahydropterin synthase XM40_06605 PF04055 Radical SAM superfamily XM40_06610 PF14489 QueF-like protein XM40_06645 PF11514 Protein of unknown function (DUF3219) XM40_06650 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) XM40_06660 PF07486 Cell Wall Hydrolase XM40_06665 PF01943 Polysaccharide biosynthesis protein XM40_06670 PF00578 AhpC/TSA family XM40_06680 PF00557 Metallopeptidase family M24 XM40_06680 PF01321 Creatinase/Prolidase N-terminal domain XM40_06685 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family XM40_06685 PF00356 Bacterial regulatory proteins, lacI family XM40_06690 PF03123 CAT RNA binding domain XM40_06690 PF00874 PRD domain XM40_06695 PF00367 phosphotransferase system, EIIB XM40_06695 PF02378 Phosphotransferase system, EIIC XM40_06695 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XM40_06700 PF00381 PTS HPr component phosphorylation site XM40_06705 PF02896 PEP-utilising enzyme, TIM barrel domain XM40_06705 PF00391 PEP-utilising enzyme, mobile domain XM40_06705 PF05524 PEP-utilising enzyme, N-terminal XM40_06710 PF11132 Transcriptional regulator protein (SplA) XM40_06720 PF02743 Cache domain XM40_06720 PF00672 HAMP domain XM40_06720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XM40_06725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XM40_06725 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase XM40_06735 PF00543 Nitrogen regulatory protein P-II XM40_06740 PF00188 Cysteine-rich secretory protein family XM40_06745 PF00905 Penicillin binding protein transpeptidase domain XM40_06745 PF03717 Penicillin-binding Protein dimerisation domain XM40_06750 PF00989 PAS fold XM40_06750 PF08447 PAS fold XM40_06750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_06750 PF00512 His Kinase A (phospho-acceptor) domain XM40_06755 PF00155 Aminotransferase class I and II XM40_06760 PF00072 Response regulator receiver domain XM40_06760 PF01584 CheW-like domain XM40_06765 PF14177 YkyB-like protein XM40_06770 PF07690 Major Facilitator Superfamily XM40_06775 PF01476 LysM domain XM40_06775 PF03734 L,D-transpeptidase catalytic domain XM40_06780 PF00149 Calcineurin-like phosphoesterase XM40_06780 PF10518 TAT (twin-arginine translocation) pathway signal sequence XM40_06795 PF10388 EAL-domain associated signalling protein domain XM40_06795 PF00563 EAL domain XM40_06800 PF08796 Protein of unknown function (DUF1797) XM40_06805 PF04308 Ribonuclease H-like XM40_06810 PF14156 Antirepressor AbbA XM40_06820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_06820 PF03466 LysR substrate binding domain XM40_06825 PF00258 Flavodoxin XM40_06835 PF00258 Flavodoxin XM40_06840 PF14602 Hexapeptide repeat of succinyl-transferase XM40_06840 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal XM40_06840 PF00132 Bacterial transferase hexapeptide (six repeats) XM40_06845 PF07687 Peptidase dimerisation domain XM40_06845 PF01546 Peptidase family M20/M25/M40 XM40_06850 PF03698 Uncharacterised protein family (UPF0180) XM40_06855 PF00924 Mechanosensitive ion channel XM40_06860 PF00578 AhpC/TSA family XM40_06875 PF12804 MobA-like NTP transferase domain XM40_06880 PF00899 ThiF family XM40_06885 PF03453 MoeA N-terminal region (domain I and II) XM40_06885 PF03454 MoeA C-terminal region (domain IV) XM40_06885 PF00994 Probable molybdopterin binding domain XM40_06890 PF03205 Molybdopterin guanine dinucleotide synthesis protein B XM40_06895 PF02391 MoaE protein XM40_06900 PF02597 ThiS family XM40_06905 PF04893 Yip1 domain XM40_06910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XM40_06915 PF00005 ABC transporter XM40_06920 PF02687 FtsX-like permease family XM40_06920 PF12704 MacB-like periplasmic core domain XM40_06925 PF08220 DeoR-like helix-turn-helix domain XM40_06925 PF00455 DeoR C terminal sensor domain XM40_06930 PF00294 pfkB family carbohydrate kinase XM40_06935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XM40_06935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XM40_06940 PF10502 Signal peptidase, peptidase S26 XM40_06950 PF12848 ABC transporter XM40_06950 PF00005 ABC transporter XM40_06955 PF02558 Ketopantoate reductase PanE/ApbA XM40_06955 PF08546 Ketopantoate reductase PanE/ApbA C terminal XM40_06960 PF02073 Thermophilic metalloprotease (M29) XM40_06975 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin XM40_06975 PF18277 AbrB C-terminal domain XM40_06980 PF00989 PAS fold XM40_06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_06980 PF00512 His Kinase A (phospho-acceptor) domain XM40_06985 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like XM40_06990 PF02080 TrkA-C domain XM40_06990 PF02254 TrkA-N domain XM40_06995 PF13382 Adenine deaminase C-terminal domain XM40_06995 PF01979 Amidohydrolase family XM40_07000 PF17770 Ribonuclease J C-terminal domain XM40_07000 PF00753 Metallo-beta-lactamase superfamily XM40_07000 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain XM40_07015 PF01327 Polypeptide deformylase XM40_07025 PF10368 Putative cell-wall binding lipoprotein XM40_07030 PF00698 Acyl transferase domain XM40_07035 PF14765 Polyketide synthase dehydratase XM40_07035 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_07035 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_07035 PF16197 Ketoacyl-synthetase C-terminal extension XM40_07035 PF00668 Condensation domain XM40_07035 PF13193 AMP-binding enzyme C-terminal domain XM40_07035 PF00501 AMP-binding enzyme XM40_07035 PF00550 Phosphopantetheine attachment site XM40_07035 PF08659 KR domain XM40_07040 PF14765 Polyketide synthase dehydratase XM40_07040 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_07040 PF00550 Phosphopantetheine attachment site XM40_07040 PF08659 KR domain XM40_07040 PF16197 Ketoacyl-synthetase C-terminal extension XM40_07040 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_07045 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_07045 PF14765 Polyketide synthase dehydratase XM40_07045 PF00501 AMP-binding enzyme XM40_07045 PF16197 Ketoacyl-synthetase C-terminal extension XM40_07045 PF00668 Condensation domain XM40_07045 PF13193 AMP-binding enzyme C-terminal domain XM40_07045 PF00550 Phosphopantetheine attachment site XM40_07045 PF08659 KR domain XM40_07045 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_07050 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_07050 PF08659 KR domain XM40_07050 PF00550 Phosphopantetheine attachment site XM40_07050 PF14765 Polyketide synthase dehydratase XM40_07050 PF16197 Ketoacyl-synthetase C-terminal extension XM40_07050 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_07055 PF08659 KR domain XM40_07055 PF00550 Phosphopantetheine attachment site XM40_07055 PF16197 Ketoacyl-synthetase C-terminal extension XM40_07055 PF14765 Polyketide synthase dehydratase XM40_07055 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_07055 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_07060 PF14765 Polyketide synthase dehydratase XM40_07060 PF16197 Ketoacyl-synthetase C-terminal extension XM40_07060 PF00550 Phosphopantetheine attachment site XM40_07060 PF08659 KR domain XM40_07060 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_07060 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_07065 PF00668 Condensation domain XM40_07065 PF13193 AMP-binding enzyme C-terminal domain XM40_07065 PF00501 AMP-binding enzyme XM40_07065 PF08659 KR domain XM40_07065 PF16197 Ketoacyl-synthetase C-terminal extension XM40_07065 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_07065 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_07065 PF14765 Polyketide synthase dehydratase XM40_07065 PF00550 Phosphopantetheine attachment site XM40_07070 PF11954 Domain of unknown function (DUF3471) XM40_07070 PF00144 Beta-lactamase XM40_07075 PF00676 Dehydrogenase E1 component XM40_07080 PF02780 Transketolase, C-terminal domain XM40_07080 PF02779 Transketolase, pyrimidine binding domain XM40_07085 PF02817 e3 binding domain XM40_07085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XM40_07085 PF00364 Biotin-requiring enzyme XM40_07090 PF07992 Pyridine nucleotide-disulphide oxidoreductase XM40_07090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XM40_07105 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain XM40_07105 PF01276 Orn/Lys/Arg decarboxylase, major domain XM40_07110 PF05256 Uncharacterised protein family (UPF0223) XM40_07115 PF06335 Protein of unknown function (DUF1054) XM40_07125 PF00459 Inositol monophosphatase family XM40_07130 PF00583 Acetyltransferase (GNAT) family XM40_07135 PF01447 Thermolysin metallopeptidase, catalytic domain XM40_07135 PF07504 Fungalysin/Thermolysin Propeptide Motif XM40_07135 PF02868 Thermolysin metallopeptidase, alpha-helical domain XM40_07135 PF03413 Peptidase propeptide and YPEB domain XM40_07150 PF08281 Sigma-70, region 4 XM40_07150 PF04542 Sigma-70 region 2 XM40_07155 PF13490 Putative zinc-finger XM40_07165 PF17259 Family of unknown function (DUF5325) XM40_07175 PF14036 YlaH-like protein XM40_07180 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) XM40_07185 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) XM40_07190 PF02562 PhoH-like protein XM40_07190 PF13638 PIN domain XM40_07200 PF04960 Glutaminase XM40_07205 PF07408 Protein of unknown function (DUF1507) XM40_07210 PF01098 Cell cycle protein XM40_07215 PF00682 HMGL-like XM40_07215 PF02436 Conserved carboxylase domain XM40_07215 PF02785 Biotin carboxylase C-terminal domain XM40_07215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XM40_07215 PF00289 Biotin carboxylase, N-terminal domain XM40_07215 PF00364 Biotin-requiring enzyme XM40_07220 PF02628 Cytochrome oxidase assembly protein XM40_07225 PF01040 UbiA prenyltransferase family XM40_07230 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XM40_07230 PF02790 Cytochrome C oxidase subunit II, transmembrane domain XM40_07230 PF00034 Cytochrome c XM40_07235 PF00115 Cytochrome C and Quinol oxidase polypeptide I XM40_07240 PF00510 Cytochrome c oxidase subunit III XM40_07245 PF03626 Prokaryotic Cytochrome C oxidase subunit IV XM40_07250 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) XM40_07255 PF08868 YugN-like family XM40_07260 PF00571 CBS domain XM40_07265 PF00188 Cysteine-rich secretory protein family XM40_07265 PF14504 CAP-associated N-terminal XM40_07270 PF14071 Putative coat protein XM40_07275 PF14003 YlbE-like protein XM40_07280 PF06133 Control of competence regulator ComK, YlbF/YmcA XM40_07285 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) XM40_07300 PF01467 Cytidylyltransferase-like XM40_07305 PF07670 Nucleoside recognition XM40_07310 PF01734 Patatin-like phospholipase XM40_07315 PF13180 PDZ domain XM40_07315 PF05362 Lon protease (S16) C-terminal proteolytic domain XM40_07320 PF05636 HIGH Nucleotidyl Transferase XM40_07325 PF02620 Large ribosomal RNA subunit accumulation protein YceD XM40_07335 PF00583 Acetyltransferase (GNAT) family XM40_07340 PF02558 Ketopantoate reductase PanE/ApbA XM40_07340 PF08546 Ketopantoate reductase PanE/ApbA C terminal XM40_07345 PF10079 Bacillithiol biosynthesis BshC XM40_07350 PF02381 MraZ protein, putative antitoxin-like XM40_07355 PF01795 MraW methylase family XM40_07370 PF03717 Penicillin-binding Protein dimerisation domain XM40_07370 PF00905 Penicillin binding protein transpeptidase domain XM40_07370 PF03793 PASTA domain XM40_07375 PF08245 Mur ligase middle domain XM40_07375 PF02875 Mur ligase family, glutamate ligase domain XM40_07375 PF01225 Mur ligase family, catalytic domain XM40_07380 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 XM40_07380 PF00953 Glycosyl transferase family 4 XM40_07385 PF02875 Mur ligase family, glutamate ligase domain XM40_07385 PF08245 Mur ligase middle domain XM40_07390 PF01098 Cell cycle protein XM40_07395 PF04101 Glycosyltransferase family 28 C-terminal domain XM40_07395 PF03033 Glycosyltransferase family 28 N-terminal domain XM40_07400 PF01565 FAD binding domain XM40_07400 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XM40_07405 PF08478 POTRA domain, FtsQ-type XM40_07410 PF02491 SHS2 domain inserted in FTSA XM40_07415 PF12327 FtsZ family, C-terminal domain XM40_07415 PF00091 Tubulin/FtsZ family, GTPase domain XM40_07420 PF05922 Peptidase inhibitor I9 XM40_07420 PF00082 Subtilase family XM40_07425 PF03419 Sporulation factor SpoIIGA XM40_07430 PF04542 Sigma-70 region 2 XM40_07430 PF04545 Sigma-70, region 4 XM40_07435 PF04545 Sigma-70, region 4 XM40_07435 PF04542 Sigma-70 region 2 XM40_07435 PF04539 Sigma-70 region 3 XM40_07440 PF00005 ABC transporter XM40_07445 PF07687 Peptidase dimerisation domain XM40_07445 PF01546 Peptidase family M20/M25/M40 XM40_07450 PF05239 PRC-barrel domain XM40_07460 PF01168 Alanine racemase, N-terminal domain XM40_07465 PF04472 Cell division protein SepF XM40_07470 PF02325 YGGT family XM40_07475 PF01479 S4 domain XM40_07475 PF17774 Putative RNA-binding domain in YlmH XM40_07480 PF05103 DivIVA protein XM40_07490 PF08264 Anticodon-binding domain of tRNA XM40_07490 PF00133 tRNA synthetases class I (I, L, M and V) XM40_07495 PF01258 Prokaryotic dksA/traR C4-type zinc finger XM40_07500 PF01252 Signal peptidase (SPase) II XM40_07505 PF01479 S4 domain XM40_07505 PF00849 RNA pseudouridylate synthase XM40_07510 PF00156 Phosphoribosyl transferase domain XM40_07515 PF00860 Permease family XM40_07520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XM40_07520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XM40_07525 PF01979 Amidohydrolase family XM40_07530 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XM40_07530 PF00117 Glutamine amidotransferase class-I XM40_07535 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XM40_07535 PF02142 MGS-like domain XM40_07535 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XM40_07540 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B XM40_07540 PF00175 Oxidoreductase NAD-binding domain XM40_07545 PF01180 Dihydroorotate dehydrogenase XM40_07550 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XM40_07555 PF00156 Phosphoribosyl transferase domain XM40_07560 PF01507 Phosphoadenosine phosphosulfate reductase family XM40_07565 PF01384 Phosphate transporter family XM40_07570 PF14306 PUA-like domain XM40_07570 PF01747 ATP-sulfurylase XM40_07580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XM40_07585 PF01903 CbiX XM40_07600 PF00689 Cation transporting ATPase, C-terminus XM40_07600 PF00690 Cation transporter/ATPase, N-terminus XM40_07605 PF03755 YicC-like family, N-terminal region XM40_07605 PF08340 Domain of unknown function (DUF1732) XM40_07610 PF04025 Domain of unknown function (DUF370) XM40_07615 PF00625 Guanylate kinase XM40_07620 PF01192 RNA polymerase Rpb6 XM40_07625 PF02441 Flavoprotein XM40_07625 PF04127 DNA / pantothenate metabolism flavoprotein XM40_07630 PF18074 Primosomal protein N C-terminal domain XM40_07630 PF00271 Helicase conserved C-terminal domain XM40_07630 PF18319 PriA DNA helicase Cys-rich region (CRR) domain XM40_07630 PF04851 Type III restriction enzyme, res subunit XM40_07630 PF17764 3′ DNA-binding domain (3′BD) XM40_07635 PF01327 Polypeptide deformylase XM40_07640 PF00551 Formyl transferase XM40_07640 PF02911 Formyl transferase, C-terminal domain XM40_07645 PF01029 NusB family XM40_07645 PF01189 16S rRNA methyltransferase RsmB/F XM40_07650 PF04055 Radical SAM superfamily XM40_07660 PF03793 PASTA domain XM40_07660 PF00069 Protein kinase domain XM40_07665 PF16745 RsgA N-terminal domain XM40_07665 PF03193 RsgA GTPase XM40_07670 PF00834 Ribulose-phosphate 3 epimerase family XM40_07675 PF04263 Thiamin pyrophosphokinase, catalytic domain XM40_07675 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain XM40_07680 PF08183 Stage V sporulation protein family XM40_07685 PF00830 Ribosomal L28 family XM40_07690 PF03780 Asp23 family, cell envelope-related function XM40_07695 PF13684 Dihydroxyacetone kinase family XM40_07695 PF02734 DAK2 domain XM40_07700 PF03315 Serine dehydratase beta chain XM40_07700 PF01842 ACT domain XM40_07705 PF03313 Serine dehydratase alpha chain XM40_07710 PF17191 RecG wedge domain XM40_07710 PF00270 DEAD/DEAH box helicase XM40_07710 PF00271 Helicase conserved C-terminal domain XM40_07715 PF03061 Thioesterase superfamily XM40_07720 PF02504 Fatty acid synthesis protein XM40_07725 PF00698 Acyl transferase domain XM40_07735 PF00550 Phosphopantetheine attachment site XM40_07740 PF14622 Ribonuclease-III-like XM40_07740 PF00035 Double-stranded RNA binding motif XM40_07745 PF02463 RecF/RecN/SMC N terminal domain XM40_07745 PF06470 SMC proteins Flexible Hinge Domain XM40_07750 PF02881 SRP54-type protein, helical bundle domain XM40_07750 PF00448 SRP54-type protein, GTPase domain XM40_07760 PF04297 Putative helix-turn-helix protein, YlxM / p13 like XM40_07765 PF02881 SRP54-type protein, helical bundle domain XM40_07765 PF02978 Signal peptide binding domain XM40_07765 PF00448 SRP54-type protein, GTPase domain XM40_07770 PF00886 Ribosomal protein S16 XM40_07780 PF11068 YlqD protein XM40_07785 PF05239 PRC-barrel domain XM40_07785 PF01782 RimM N-terminal domain XM40_07790 PF01746 tRNA (Guanine-1)-methyltransferase XM40_07795 PF01245 Ribosomal protein L19 XM40_07800 PF01926 50S ribosome-binding GTPase XM40_07805 PF01351 Ribonuclease HII XM40_07815 PF01312 FlhB HrpN YscU SpaS Family XM40_07820 PF08442 ATP-grasp domain XM40_07820 PF00549 CoA-ligase XM40_07825 PF00549 CoA-ligase XM40_07825 PF02629 CoA binding domain XM40_07830 PF02481 DNA recombination-mediator protein A XM40_07835 PF01396 Topoisomerase DNA binding C4 zinc finger XM40_07835 PF01751 Toprim domain XM40_07835 PF01131 DNA topoisomerase XM40_07840 PF01134 Glucose inhibited division protein A XM40_07845 PF00589 Phage integrase family XM40_07845 PF02899 Phage integrase, N-terminal SAM-like domain XM40_07850 PF00227 Proteasome subunit XM40_07855 PF10431 C-terminal, D2-small domain, of ClpB protein XM40_07855 PF07724 AAA domain (Cdc48 subfamily) XM40_07855 PF00004 ATPase family associated with various cellular activities (AAA) XM40_07860 PF08222 CodY helix-turn-helix domain XM40_07860 PF06018 CodY GAF-like domain XM40_07865 PF00460 Flagella basal body rod protein XM40_07870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XM40_07870 PF00460 Flagella basal body rod protein XM40_07875 PF02049 Flagellar hook-basal body complex protein FliE XM40_07880 PF08345 Flagellar M-ring protein C-terminal XM40_07880 PF01514 Secretory protein of YscJ/FliF family XM40_07885 PF14841 FliG middle domain XM40_07885 PF01706 FliG C-terminal domain XM40_07885 PF14842 FliG N-terminal domain XM40_07890 PF02108 Flagellar assembly protein FliH XM40_07895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XM40_07895 PF02874 ATP synthase alpha/beta family, beta-barrel domain XM40_07895 PF18269 T3SS EscN ATPase C-terminal domain XM40_07900 PF02050 Flagellar FliJ protein XM40_07905 PF03448 MgtE intracellular N domain XM40_07910 PF02120 Flagellar hook-length control protein FliK XM40_07915 PF03963 Flagellar hook capping protein - N-terminal region XM40_07920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XM40_07920 PF00460 Flagella basal body rod protein XM40_07925 PF06289 Flagellar and Swarming motility proteins XM40_07930 PF03748 Flagellar basal body-associated protein FliL XM40_07935 PF02154 Flagellar motor switch protein FliM XM40_07935 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XM40_07940 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XM40_07940 PF04509 CheC-like family XM40_07945 PF00072 Response regulator receiver domain XM40_07950 PF04347 Flagellar biosynthesis protein, FliO XM40_07955 PF00813 FliP family XM40_07960 PF01313 Bacterial export proteins, family 3 XM40_07965 PF01311 Bacterial export proteins, family 1 XM40_07970 PF01312 FlhB HrpN YscU SpaS Family XM40_07975 PF00771 FHIPEP family XM40_07980 PF00448 SRP54-type protein, GTPase domain XM40_07985 PF10609 NUBPL iron-transfer P-loop NTPase XM40_07990 PF01339 CheB methylesterase XM40_07990 PF00072 Response regulator receiver domain XM40_07995 PF02895 Signal transducing histidine kinase, homodimeric domain XM40_07995 PF01584 CheW-like domain XM40_07995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_07995 PF01627 Hpt domain XM40_07995 PF07194 P2 response regulator binding domain XM40_08000 PF01584 CheW-like domain XM40_08005 PF04509 CheC-like family XM40_08010 PF03975 CheD chemotactic sensory transduction XM40_08015 PF04542 Sigma-70 region 2 XM40_08015 PF04539 Sigma-70 region 3 XM40_08015 PF04545 Sigma-70, region 4 XM40_08025 PF00318 Ribosomal protein S2 XM40_08030 PF00889 Elongation factor TS XM40_08035 PF00696 Amino acid kinase family XM40_08040 PF01765 Ribosome recycling factor XM40_08045 PF01255 Putative undecaprenyl diphosphate synthase XM40_08055 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain XM40_08055 PF13288 DXP reductoisomerase C-terminal domain XM40_08055 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XM40_08060 PF02163 Peptidase family M50 XM40_08060 PF17820 PDZ domain XM40_08065 PF04073 Aminoacyl-tRNA editing domain XM40_08065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XM40_08065 PF03129 Anticodon binding domain XM40_08070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XM40_08070 PF11490 DNA polymerase III polC-type N-terminus II XM40_08070 PF14579 Helix-hairpin-helix motif XM40_08070 PF14480 DNA polymerase III polC-type N-terminus I XM40_08070 PF02811 PHP domain XM40_08070 PF00929 Exonuclease XM40_08070 PF07733 Bacterial DNA polymerase III alpha NTPase domain XM40_08075 PF17384 RimP C-terminal SH3 domain XM40_08075 PF02576 RimP N-terminal domain XM40_08080 PF13184 NusA-like KH domain XM40_08080 PF08529 NusA N-terminal domain XM40_08080 PF00575 S1 RNA binding domain XM40_08085 PF04296 Protein of unknown function (DUF448) XM40_08090 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family XM40_08095 PF04760 Translation initiation factor IF-2, N-terminal region XM40_08095 PF11987 Translation-initiation factor 2 XM40_08095 PF00009 Elongation factor Tu GTP binding domain XM40_08100 PF04456 Protein of unknown function (DUF503) XM40_08105 PF02033 Ribosome-binding factor A XM40_08110 PF16198 tRNA pseudouridylate synthase B C-terminal domain XM40_08110 PF01509 TruB family pseudouridylate synthase (N terminal domain) XM40_08115 PF01687 Riboflavin kinase XM40_08115 PF06574 FAD synthetase XM40_08120 PF00312 Ribosomal protein S15 XM40_08125 PF01138 3' exoribonuclease family, domain 1 XM40_08125 PF00575 S1 RNA binding domain XM40_08125 PF03725 3' exoribonuclease family, domain 2 XM40_08125 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XM40_08125 PF00013 KH domain XM40_08130 PF01522 Polysaccharide deacetylase XM40_08135 PF00675 Insulinase (Peptidase family M16) XM40_08135 PF05193 Peptidase M16 inactive domain XM40_08140 PF05239 PRC-barrel domain XM40_08145 PF16924 Dipicolinate synthase subunit A N-terminal domain XM40_08145 PF01262 Alanine dehydrogenase/PNT, C-terminal domain XM40_08150 PF02441 Flavoprotein XM40_08155 PF01118 Semialdehyde dehydrogenase, NAD binding domain XM40_08155 PF02774 Semialdehyde dehydrogenase, dimerisation domain XM40_08160 PF13840 ACT domain XM40_08160 PF00696 Amino acid kinase family XM40_08165 PF00701 Dihydrodipicolinate synthetase family XM40_08170 PF17770 Ribonuclease J C-terminal domain XM40_08170 PF00753 Metallo-beta-lactamase superfamily XM40_08170 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain XM40_08175 PF00574 Clp protease XM40_08180 PF14035 YlzJ-like protein XM40_08185 PF01580 FtsK/SpoIIIE family XM40_08185 PF09397 Ftsk gamma domain XM40_08185 PF17854 FtsK alpha domain XM40_08190 PF00392 Bacterial regulatory proteins, gntR family XM40_08190 PF07702 UTRA domain XM40_08195 PF07690 Major Facilitator Superfamily XM40_08200 PF01047 MarR family XM40_08205 PF03176 MMPL family XM40_08210 PF05193 Peptidase M16 inactive domain XM40_08215 PF00675 Insulinase (Peptidase family M16) XM40_08215 PF05193 Peptidase M16 inactive domain XM40_08225 PF11588 Protein of unknown function (DUF3243) XM40_08230 PF11868 Protein of unknown function (DUF3388) XM40_08235 PF13464 Domain of unknown function (DUF4115) XM40_08240 PF01066 CDP-alcohol phosphatidyltransferase XM40_08245 PF02464 Competence-damaged protein XM40_08245 PF18146 Damage-inducible protein CinA KH domain XM40_08245 PF00994 Probable molybdopterin binding domain XM40_08250 PF00154 recA bacterial DNA recombination protein XM40_08255 PF00144 Beta-lactamase XM40_08260 PF12072 Domain of unknown function (DUF3552) XM40_08260 PF00013 KH domain XM40_08260 PF01966 HD domain XM40_08265 PF13277 YmdB-like protein XM40_08270 PF04232 Stage V sporulation protein S (SpoVS) XM40_08275 PF00107 Zinc-binding dehydrogenase XM40_08275 PF08240 Alcohol dehydrogenase GroES-like domain XM40_08280 PF00155 Aminotransferase class I and II XM40_08285 PF00919 Uncharacterized protein family UPF0004 XM40_08285 PF04055 Radical SAM superfamily XM40_08285 PF01938 TRAM domain XM40_08290 PF06133 Control of competence regulator ComK, YlbF/YmcA XM40_08295 PF10628 Outer spore coat protein E (CotE) XM40_08300 PF05190 MutS family domain IV XM40_08300 PF00488 MutS domain V XM40_08300 PF05192 MutS domain III XM40_08300 PF01624 MutS domain I XM40_08300 PF05188 MutS domain II XM40_08305 PF08676 MutL C terminal dimerisation domain XM40_08305 PF01119 DNA mismatch repair protein, C-terminal domain XM40_08310 PF14659 Phage integrase, N-terminal SAM-like domain XM40_08310 PF00589 Phage integrase family XM40_08320 PF01381 Helix-turn-helix XM40_08355 PF17356 Phage-like element PBSX protein XtrA XM40_08410 PF00589 Phage integrase family XM40_08505 PF01464 Transglycosylase SLT domain XM40_08515 PF13457 GW (Gly-Tryp) dipeptide domain XM40_08515 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XM40_08520 PF12708 Pectate lyase superfamily protein XM40_08520 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain XM40_08550 PF00753 Metallo-beta-lactamase superfamily XM40_08555 PF00698 Acyl transferase domain XM40_08560 PF00698 Acyl transferase domain XM40_08565 PF00698 Acyl transferase domain XM40_08570 PF00550 Phosphopantetheine attachment site XM40_08575 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal XM40_08575 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal XM40_08580 PF00378 Enoyl-CoA hydratase/isomerase XM40_08585 PF00378 Enoyl-CoA hydratase/isomerase XM40_08590 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_08590 PF13193 AMP-binding enzyme C-terminal domain XM40_08590 PF00501 AMP-binding enzyme XM40_08590 PF00668 Condensation domain XM40_08590 PF16197 Ketoacyl-synthetase C-terminal extension XM40_08590 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_08590 PF00550 Phosphopantetheine attachment site XM40_08590 PF08659 KR domain XM40_08590 PF14765 Polyketide synthase dehydratase XM40_08595 PF08659 KR domain XM40_08595 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_08595 PF14765 Polyketide synthase dehydratase XM40_08595 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_08595 PF16197 Ketoacyl-synthetase C-terminal extension XM40_08595 PF00550 Phosphopantetheine attachment site XM40_08600 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_08600 PF14765 Polyketide synthase dehydratase XM40_08600 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_08600 PF00550 Phosphopantetheine attachment site XM40_08600 PF08659 KR domain XM40_08600 PF08242 Methyltransferase domain XM40_08600 PF08659 KR domain XM40_08600 PF16197 Ketoacyl-synthetase C-terminal extension XM40_08600 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_08600 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_08600 PF08242 Methyltransferase domain XM40_08600 PF00550 Phosphopantetheine attachment site XM40_08600 PF14765 Polyketide synthase dehydratase XM40_08600 PF16197 Ketoacyl-synthetase C-terminal extension XM40_08605 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_08605 PF16197 Ketoacyl-synthetase C-terminal extension XM40_08605 PF00550 Phosphopantetheine attachment site XM40_08605 PF00668 Condensation domain XM40_08605 PF08659 KR domain XM40_08605 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_08605 PF00501 AMP-binding enzyme XM40_08605 PF14765 Polyketide synthase dehydratase XM40_08605 PF13193 AMP-binding enzyme C-terminal domain XM40_08610 PF08242 Methyltransferase domain XM40_08610 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_08610 PF16197 Ketoacyl-synthetase C-terminal extension XM40_08610 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_08610 PF00975 Thioesterase domain XM40_08610 PF14765 Polyketide synthase dehydratase XM40_08610 PF00550 Phosphopantetheine attachment site XM40_08615 PF00067 Cytochrome P450 XM40_08620 PF14040 Deoxyribonuclease NucA/NucB XM40_08625 PF06912 Protein of unknown function (DUF1275) XM40_08635 PF00082 Subtilase family XM40_08645 PF05908 Poly-gamma-glutamate hydrolase XM40_08650 PF02566 OsmC-like protein XM40_08655 PF00893 Small Multidrug Resistance protein XM40_08660 PF00893 Small Multidrug Resistance protein XM40_08670 PF12788 YmaF family XM40_08680 PF17209 Hfq protein XM40_08685 PF14157 YmzC-like protein XM40_08695 PF07972 NrdI Flavodoxin like XM40_08700 PF08343 Ribonucleotide reductase N-terminal XM40_08700 PF00317 Ribonucleotide reductase, all-alpha domain XM40_08700 PF02867 Ribonucleotide reductase, barrel domain XM40_08705 PF00268 Ribonucleotide reductase, small chain XM40_08725 PF00004 ATPase family associated with various cellular activities (AAA) XM40_08725 PF17866 AAA lid domain XM40_08730 PF16360 GTP-binding GTPase Middle Region XM40_08730 PF01926 50S ribosome-binding GTPase XM40_08730 PF13167 GTP-binding GTPase N-terminal XM40_08735 PF06838 Methionine gamma-lyase XM40_08740 PF13411 MerR HTH family regulatory protein XM40_08745 PF03951 Glutamine synthetase, beta-Grasp domain XM40_08745 PF00120 Glutamine synthetase, catalytic domain XM40_08760 PF04616 Glycosyl hydrolases family 43 XM40_08760 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain XM40_08765 PF00480 ROK family XM40_08770 PF01261 Xylose isomerase-like TIM barrel XM40_08775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XM40_08775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XM40_08780 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XM40_08780 PF00391 PEP-utilising enzyme, mobile domain XM40_08800 PF00107 Zinc-binding dehydrogenase XM40_08800 PF08240 Alcohol dehydrogenase GroES-like domain XM40_08805 PF17094 Uncharacterised protein family (UPF0715) XM40_08820 PF13021 Domain of unknown function (DUF3885) XM40_08830 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading XM40_08830 PF18416 N-acetylglucosamine binding protein domain 2 XM40_08835 PF09680 Family of unknown function XM40_08845 PF12708 Pectate lyase superfamily protein XM40_08845 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain XM40_08850 PF00692 dUTPase XM40_08855 PF05908 Poly-gamma-glutamate hydrolase XM40_08865 PF10710 Protein of unknown function (DUF2512) XM40_08875 PF00717 Peptidase S24-like XM40_08875 PF01726 LexA DNA binding domain XM40_08880 PF01476 LysM domain XM40_08885 PF00239 Resolvase, N terminal domain XM40_08890 PF05979 Bacterial protein of unknown function (DUF896) XM40_08895 PF02779 Transketolase, pyrimidine binding domain XM40_08895 PF00456 Transketolase, thiamine diphosphate binding domain XM40_08895 PF02780 Transketolase, C-terminal domain XM40_08900 PF10747 Sporulation inhibitor of replication protein SirA XM40_08905 PF03672 Uncharacterised protein family (UPF0154) XM40_08910 PF09388 Spo0E like sporulation regulatory protein XM40_08915 PF02683 Cytochrome C biogenesis protein transmembrane region XM40_08920 PF00072 Response regulator receiver domain XM40_08925 PF07301 Protein of unknown function (DUF1453) XM40_08930 PF11084 Protein of unknown function (DUF2621) XM40_08940 PF08179 Small acid-soluble spore protein P family XM40_08950 PF00330 Aconitase family (aconitate hydratase) XM40_08950 PF00694 Aconitase C-terminal domain XM40_08955 PF00578 AhpC/TSA family XM40_08960 PF13040 Fur-regulated basic protein B XM40_08965 PF08177 Small acid-soluble spore protein N family XM40_08975 PF03061 Thioesterase superfamily XM40_08985 PF01521 Iron-sulphur cluster biosynthesis XM40_08990 PF02660 Glycerol-3-phosphate acyltransferase XM40_08995 PF13380 CoA binding domain XM40_09000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_09000 PF00986 DNA gyrase B subunit, carboxyl terminus XM40_09000 PF00204 DNA gyrase B XM40_09000 PF01751 Toprim domain XM40_09005 PF03989 DNA gyrase C-terminal domain, beta-propeller XM40_09005 PF00521 DNA gyrase/topoisomerase IV, subunit A XM40_09015 PF01235 Sodium:alanine symporter family XM40_09020 PF00294 pfkB family carbohydrate kinase XM40_09025 PF00107 Zinc-binding dehydrogenase XM40_09025 PF08240 Alcohol dehydrogenase GroES-like domain XM40_09030 PF01081 KDPG and KHG aldolase XM40_09035 PF03786 D-mannonate dehydratase (UxuA) XM40_09040 PF00106 short chain dehydrogenase XM40_09045 PF00356 Bacterial regulatory proteins, lacI family XM40_09050 PF07690 Major Facilitator Superfamily XM40_09060 PF13761 Domain of unknown function (DUF4166) XM40_09065 PF14158 YndJ-like protein XM40_09090 PF00942 Cellulose binding domain XM40_09090 PF00150 Cellulase (glycosyl hydrolase family 5) XM40_09100 PF00512 His Kinase A (phospho-acceptor) domain XM40_09100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_09105 PF00072 Response regulator receiver domain XM40_09105 PF00486 Transcriptional regulatory protein, C terminal XM40_09110 PF17189 Glycosyl hydrolase family 30 beta sandwich domain XM40_09110 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain XM40_09115 PF04616 Glycosyl hydrolases family 43 XM40_09115 PF03422 Carbohydrate binding module (family 6) XM40_09120 PF00975 Thioesterase domain XM40_09120 PF00550 Phosphopantetheine attachment site XM40_09120 PF00501 AMP-binding enzyme XM40_09120 PF00668 Condensation domain XM40_09120 PF13193 AMP-binding enzyme C-terminal domain XM40_09125 PF13193 AMP-binding enzyme C-terminal domain XM40_09125 PF00501 AMP-binding enzyme XM40_09125 PF00668 Condensation domain XM40_09125 PF00550 Phosphopantetheine attachment site XM40_09130 PF13193 AMP-binding enzyme C-terminal domain XM40_09130 PF00501 AMP-binding enzyme XM40_09130 PF16197 Ketoacyl-synthetase C-terminal extension XM40_09130 PF00668 Condensation domain XM40_09130 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_09130 PF00550 Phosphopantetheine attachment site XM40_09130 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_09130 PF00202 Aminotransferase class-III XM40_09135 PF00698 Acyl transferase domain XM40_09145 PF01144 Coenzyme A transferase XM40_09150 PF01144 Coenzyme A transferase XM40_09160 PF00067 Cytochrome P450 XM40_09165 PF04055 Radical SAM superfamily XM40_09165 PF06968 Biotin and Thiamin Synthesis associated domain XM40_09175 PF00155 Aminotransferase class I and II XM40_09180 PF00202 Aminotransferase class-III XM40_09185 PF03744 6-carboxyhexanoate--CoA ligase XM40_09190 PF04138 GtrA-like protein XM40_09195 PF00483 Nucleotidyl transferase XM40_09200 PF09335 SNARE associated Golgi protein XM40_09205 PF01039 Carboxyl transferase domain XM40_09210 PF00378 Enoyl-CoA hydratase/isomerase XM40_09215 PF00682 HMGL-like XM40_09220 PF00364 Biotin-requiring enzyme XM40_09225 PF00289 Biotin carboxylase, N-terminal domain XM40_09225 PF02785 Biotin carboxylase C-terminal domain XM40_09225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XM40_09230 PF00501 AMP-binding enzyme XM40_09230 PF13193 AMP-binding enzyme C-terminal domain XM40_09235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XM40_09235 PF02770 Acyl-CoA dehydrogenase, middle domain XM40_09235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XM40_09240 PF02638 Glycosyl hydrolase-like 10 XM40_09245 PF07098 Protein of unknown function (DUF1360) XM40_09250 PF00501 AMP-binding enzyme XM40_09250 PF00975 Thioesterase domain XM40_09250 PF00550 Phosphopantetheine attachment site XM40_09250 PF13193 AMP-binding enzyme C-terminal domain XM40_09250 PF00668 Condensation domain XM40_09255 PF00668 Condensation domain XM40_09255 PF00550 Phosphopantetheine attachment site XM40_09255 PF00501 AMP-binding enzyme XM40_09255 PF13193 AMP-binding enzyme C-terminal domain XM40_09270 PF18801 response regulator aspartate phosphatase H, N terminal XM40_09290 PF16219 Domain of unknown function (DUF4879) XM40_09315 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH XM40_09315 PF04740 LXG domain of WXG superfamily XM40_09320 PF09346 SMI1 / KNR4 family (SUKH-1) XM40_09330 PF07508 Recombinase XM40_09330 PF00239 Resolvase, N terminal domain XM40_09335 PF11518 Protein of unknown function (DUF3221) XM40_09370 PF14037 YoqO-like protein XM40_09385 PF00550 Phosphopantetheine attachment site XM40_09385 PF00668 Condensation domain XM40_09385 PF13193 AMP-binding enzyme C-terminal domain XM40_09385 PF00501 AMP-binding enzyme XM40_09390 PF00501 AMP-binding enzyme XM40_09390 PF13193 AMP-binding enzyme C-terminal domain XM40_09390 PF00668 Condensation domain XM40_09390 PF00550 Phosphopantetheine attachment site XM40_09400 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family XM40_09405 PF01263 Aldose 1-epimerase XM40_09410 PF01554 MatE XM40_09415 PF16800 IseA DL-endopeptidase inhibitor XM40_09425 PF00589 Phage integrase family XM40_09430 PF12728 Helix-turn-helix domain XM40_09440 PF07690 Major Facilitator Superfamily XM40_09455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_09455 PF03466 LysR substrate binding domain XM40_09460 PF00107 Zinc-binding dehydrogenase XM40_09460 PF08240 Alcohol dehydrogenase GroES-like domain XM40_09465 PF07992 Pyridine nucleotide-disulphide oxidoreductase XM40_09465 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XM40_09470 PF01645 Conserved region in glutamate synthase XM40_09470 PF00310 Glutamine amidotransferases class-II XM40_09470 PF04898 Glutamate synthase central domain XM40_09470 PF01493 GXGXG motif XM40_09475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_09475 PF03466 LysR substrate binding domain XM40_09480 PF01472 PUA domain XM40_09480 PF00696 Amino acid kinase family XM40_09485 PF14748 Pyrroline-5-carboxylate reductase dimerisation XM40_09485 PF03807 NADP oxidoreductase coenzyme F420-dependent XM40_09490 PF02334 Replication terminator protein XM40_09495 PF00106 short chain dehydrogenase XM40_09500 PF06103 Bacterial protein of unknown function (DUF948) XM40_09510 PF07690 Major Facilitator Superfamily XM40_09515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XM40_09515 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XM40_09520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XM40_09520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XM40_09525 PF01568 Molydopterin dinucleotide binding domain XM40_09525 PF00384 Molybdopterin oxidoreductase XM40_09525 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XM40_09550 PF01638 HxlR-like helix-turn-helix XM40_09555 PF01588 Putative tRNA binding domain XM40_09560 PF12833 Helix-turn-helix domain XM40_09560 PF07883 Cupin domain XM40_09565 PF00440 Bacterial regulatory proteins, tetR family XM40_09565 PF13305 Tetracyclin repressor-like, C-terminal domain XM40_09570 PF00753 Metallo-beta-lactamase superfamily XM40_09580 PF01022 Bacterial regulatory protein, arsR family XM40_09590 PF04238 Protein of unknown function (DUF420) XM40_09595 PF18846 Bacterial archaeo-eukaryotic release factor family 5 XM40_09605 PF17676 LD-carboxypeptidase C-terminal domain XM40_09605 PF02016 LD-carboxypeptidase N-terminal domain XM40_09615 PF06725 3D domain XM40_09615 PF01476 LysM domain XM40_09620 PF16124 RecQ zinc-binding XM40_09620 PF09382 RQC domain XM40_09620 PF00271 Helicase conserved C-terminal domain XM40_09620 PF00270 DEAD/DEAH box helicase XM40_09620 PF00570 HRDC domain XM40_09625 PF02525 Flavodoxin-like fold XM40_09630 PF01258 Prokaryotic dksA/traR C4-type zinc finger XM40_09645 PF00011 Hsp20/alpha crystallin family XM40_09660 PF08000 Bacterial PH domain XM40_09670 PF00171 Aldehyde dehydrogenase family XM40_09675 PF13249 Squalene-hopene cyclase N-terminal domain XM40_09675 PF13243 Squalene-hopene cyclase C-terminal domain XM40_09680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XM40_09680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XM40_09685 PF00209 Sodium:neurotransmitter symporter family XM40_09690 PF01758 Sodium Bile acid symporter family XM40_09695 PF00753 Metallo-beta-lactamase superfamily XM40_09700 PF00364 Biotin-requiring enzyme XM40_09700 PF02817 e3 binding domain XM40_09700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XM40_09705 PF02779 Transketolase, pyrimidine binding domain XM40_09705 PF16870 2-oxoglutarate dehydrogenase C-terminal XM40_09705 PF00676 Dehydrogenase E1 component XM40_09710 PF00092 von Willebrand factor type A domain XM40_09715 PF07728 AAA domain (dynein-related subfamily) XM40_09720 PF00080 Copper/zinc superoxide dismutase (SODC) XM40_09720 PF13627 Prokaryotic lipoprotein-attachment site XM40_09725 PF00877 NlpC/P60 family XM40_09725 PF01476 LysM domain XM40_09730 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase XM40_09735 PF02457 DisA bacterial checkpoint controller nucleotide-binding XM40_09735 PF10372 Bacterial membrane-spanning protein N-terminus XM40_09740 PF01554 MatE XM40_09745 PF01740 STAS domain XM40_09750 PF02585 GlcNAc-PI de-N-acetylase XM40_09755 PF08830 Protein of unknown function (DUF1806) XM40_09765 PF00892 EamA-like transporter family XM40_09780 PF14552 Tautomerase enzyme XM40_09790 PF01638 HxlR-like helix-turn-helix XM40_09795 PF00881 Nitroreductase family XM40_09800 PF01738 Dienelactone hydrolase family XM40_09805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XM40_09810 PF11755 Protein of unknown function (DUF3311) XM40_09815 PF00474 Sodium:solute symporter family XM40_09825 PF00232 Glycosyl hydrolase family 1 XM40_09830 PF00392 Bacterial regulatory proteins, gntR family XM40_09830 PF07702 UTRA domain XM40_09835 PF01471 Putative peptidoglycan binding domain XM40_09835 PF17820 PDZ domain XM40_09835 PF03572 Peptidase family S41 XM40_09840 PF08241 Methyltransferase domain XM40_09850 PF02557 D-alanyl-D-alanine carboxypeptidase XM40_09855 PF01048 Phosphorylase superfamily XM40_09860 PF14191 YodL-like XM40_09865 PF01569 PAP2 superfamily XM40_09885 PF06855 YozE SAM-like fold XM40_09890 PF14122 YokU-like protein, putative antitoxin XM40_09895 PF12544 Lysine-2,3-aminomutase XM40_09900 PF00583 Acetyltransferase (GNAT) family XM40_09905 PF07687 Peptidase dimerisation domain XM40_09905 PF01546 Peptidase family M20/M25/M40 XM40_09910 PF01144 Coenzyme A transferase XM40_09915 PF01144 Coenzyme A transferase XM40_09920 PF00202 Aminotransferase class-III XM40_09925 PF06445 GyrI-like small molecule binding domain XM40_09935 PF00583 Acetyltransferase (GNAT) family XM40_09940 PF00535 Glycosyl transferase family 2 XM40_09955 PF12996 DUF based on E. rectale Gene description (DUF3880) XM40_09960 PF02333 Phytase XM40_09965 PF08485 Polysaccharide biosynthesis protein C-terminal XM40_09965 PF02719 Polysaccharide biosynthesis protein XM40_09970 PF02719 Polysaccharide biosynthesis protein XM40_09975 PF01641 SelR domain XM40_09980 PF01625 Peptide methionine sulfoxide reductase XM40_09985 PF01047 MarR family XM40_09990 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) XM40_09995 PF13472 GDSL-like Lipase/Acylhydrolase family XM40_10000 PF02630 SCO1/SenC XM40_10005 PF10751 Protein of unknown function (DUF2535) XM40_10010 PF00291 Pyridoxal-phosphate dependent enzyme XM40_10010 PF00585 C-terminal regulatory domain of Threonine dehydratase XM40_10015 PF08461 Ribonuclease R winged-helix domain XM40_10015 PF00158 Sigma-54 interaction domain XM40_10020 PF03006 Haemolysin-III related XM40_10030 PF00186 Dihydrofolate reductase XM40_10035 PF00303 Thymidylate synthase XM40_10040 PF14005 YpjP-like protein XM40_10045 PF04445 Putative SAM-dependent methyltransferase XM40_10050 PF06491 Disulphide isomerase XM40_10055 PF00920 Dehydratase family XM40_10060 PF08712 Scaffold protein Nfu/NifU N terminal XM40_10060 PF13769 Virulence factor XM40_10070 PF00255 Glutathione peroxidase XM40_10075 PF04204 Homoserine O-succinyltransferase XM40_10080 PF00534 Glycosyl transferases group 1 XM40_10080 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase XM40_10085 PF00313 'Cold-shock' DNA-binding domain XM40_10095 PF10819 Protein of unknown function (DUF2564) XM40_10100 PF10782 Zinc-finger XM40_10105 PF13456 Reverse transcriptase-like XM40_10110 PF02592 Putative vitamin uptake transporter XM40_10115 PF13456 Reverse transcriptase-like XM40_10125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XM40_10125 PF01367 5'-3' exonuclease, C-terminal SAM fold XM40_10130 PF10752 Protein of unknown function (DUF2533) XM40_10135 PF00350 Dynamin family XM40_10140 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family XM40_10145 PF00195 Chalcone and stilbene synthases, N-terminal domain XM40_10145 PF02797 Chalcone and stilbene synthases, C-terminal domain XM40_10170 PF00857 Isochorismatase family XM40_10180 PF00860 Permease family XM40_10185 PF00156 Phosphoribosyl transferase domain XM40_10190 PF02074 Carboxypeptidase Taq (M32) metallopeptidase XM40_10195 PF13307 Helicase C-terminal domain XM40_10210 PF02926 THUMP domain XM40_10210 PF01170 Putative RNA methylase family UPF0020 XM40_10215 PF05103 DivIVA protein XM40_10220 PF06908 YspA SLOG family XM40_10225 PF13482 RNase_H superfamily XM40_10230 PF09369 Domain of unknown function (DUF1998) XM40_10230 PF00270 DEAD/DEAH box helicase XM40_10230 PF00271 Helicase conserved C-terminal domain XM40_10235 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XM40_10245 PF14179 YppG-like protein XM40_10250 PF14178 YppF-like protein XM40_10255 PF08807 Bacterial domain of unknown function (DUF1798) XM40_10260 PF17522 Family of unknown function (DUF5446) XM40_10270 PF10720 Protein of unknown function (DUF2515) XM40_10275 PF03838 Recombination protein U XM40_10280 PF00905 Penicillin binding protein transpeptidase domain XM40_10280 PF00912 Transglycosylase XM40_10290 PF10576 Iron-sulfur binding domain of endonuclease III XM40_10290 PF00633 Helix-hairpin-helix motif XM40_10290 PF00730 HhH-GPD superfamily base excision DNA repair protein XM40_10295 PF07261 Replication initiation and membrane attachment XM40_10300 PF01336 OB-fold nucleic acid binding domain XM40_10300 PF00152 tRNA synthetases class II (D, K and N) XM40_10305 PF00155 Aminotransferase class I and II XM40_10310 PF17881 Domain of unknown function (DUF5590) XM40_10310 PF03413 Peptidase propeptide and YPEB domain XM40_10315 PF00929 Exonuclease XM40_10315 PF13307 Helicase C-terminal domain XM40_10315 PF04851 Type III restriction enzyme, res subunit XM40_10320 PF02261 Aspartate decarboxylase XM40_10325 PF02569 Pantoate-beta-alanine ligase XM40_10330 PF02548 Ketopantoate hydroxymethyltransferase XM40_10335 PF03099 Biotin/lipoate A/B protein ligase family XM40_10335 PF08279 HTH domain XM40_10335 PF02237 Biotin protein ligase C terminal domain XM40_10340 PF01743 Poly A polymerase head domain XM40_10340 PF12627 Probable RNA and SrmB- binding site of polymerase A XM40_10340 PF13735 tRNA nucleotidyltransferase domain 2 putative XM40_10345 PF00534 Glycosyl transferases group 1 XM40_10345 PF13439 Glycosyltransferase Family 4 XM40_10350 PF02585 GlcNAc-PI de-N-acetylase XM40_10355 PF02142 MGS-like domain XM40_10360 PF05173 Dihydrodipicolinate reductase, C-terminus XM40_10360 PF01113 Dihydrodipicolinate reductase, N-terminus XM40_10365 PF03819 MazG nucleotide pyrophosphohydrolase domain XM40_10370 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XM40_10370 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XM40_10375 PF00190 Cupin XM40_10380 PF09577 Sporulation protein YpjB (SpoYpjB) XM40_10385 PF07187 Protein of unknown function (DUF1405) XM40_10390 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XM40_10390 PF00032 Cytochrome b(C-terminal)/b6/petD XM40_10395 PF00033 Cytochrome b/b6/petB XM40_10400 PF00355 Rieske [2Fe-2S] domain XM40_10405 PF10673 Protein of unknown function (DUF2487) XM40_10410 PF08858 IDEAL domain XM40_10410 PF08864 UPF0302 domain XM40_10420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XM40_10425 PF02153 Prephenate dehydrogenase XM40_10425 PF01842 ACT domain XM40_10430 PF00155 Aminotransferase class I and II XM40_10435 PF00290 Tryptophan synthase alpha chain XM40_10440 PF00291 Pyridoxal-phosphate dependent enzyme XM40_10445 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XM40_10450 PF00218 Indole-3-glycerol phosphate synthase XM40_10455 PF00591 Glycosyl transferase family, a/b domain XM40_10455 PF02885 Glycosyl transferase family, helical bundle domain XM40_10460 PF00425 chorismate binding enzyme XM40_10460 PF04715 Anthranilate synthase component I, N terminal region XM40_10465 PF07736 Chorismate mutase type I XM40_10470 PF01761 3-dehydroquinate synthase XM40_10475 PF01264 Chorismate synthase XM40_10480 PF03705 CheR methyltransferase, all-alpha domain XM40_10480 PF01739 CheR methyltransferase, SAM binding domain XM40_10485 PF00334 Nucleoside diphosphate kinase XM40_10490 PF00348 Polyprenyl synthetase XM40_10495 PF01209 ubiE/COQ5 methyltransferase family XM40_10500 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 XM40_10505 PF02081 Tryptophan RNA-binding attenuator protein XM40_10510 PF01227 GTP cyclohydrolase I XM40_10515 PF00216 Bacterial DNA-binding protein XM40_10520 PF09547 Stage IV sporulation protein A (spore_IV_A) XM40_10530 PF10966 Protein of unknown function (DUF2768) XM40_10535 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XM40_10535 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XM40_10540 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XM40_10540 PF01926 50S ribosome-binding GTPase XM40_10550 PF01070 FMN-dependent dehydrogenase XM40_10555 PF00575 S1 RNA binding domain XM40_10560 PF02224 Cytidylate kinase XM40_10565 PF07238 PilZ domain XM40_10565 PF12945 Flagellar protein YcgR XM40_10570 PF14620 YpeB sporulation XM40_10570 PF03413 Peptidase propeptide and YPEB domain XM40_10575 PF01471 Putative peptidoglycan binding domain XM40_10575 PF07486 Cell Wall Hydrolase XM40_10580 PF13367 PrsW family intramembrane metalloprotease XM40_10590 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain XM40_10590 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XM40_10595 PF05389 Negative regulator of genetic competence (MecA) XM40_10600 PF00149 Calcineurin-like phosphoesterase XM40_10605 PF10864 Protein of unknown function (DUF2663) XM40_10610 PF01476 LysM domain XM40_10615 PF02517 CPBP intramembrane metalloprotease XM40_10620 PF00271 Helicase conserved C-terminal domain XM40_10620 PF00270 DEAD/DEAH box helicase XM40_10625 PF14493 Helix-turn-helix domain XM40_10635 PF12822 ECF transporter, substrate-specific component XM40_10640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XM40_10640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XM40_10640 PF01842 ACT domain XM40_10650 PF08281 Sigma-70, region 4 XM40_10650 PF04542 Sigma-70 region 2 XM40_10655 PF00989 PAS fold XM40_10655 PF18698 Histidine kinase sensor domain XM40_10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_10655 PF00672 HAMP domain XM40_10655 PF00512 His Kinase A (phospho-acceptor) domain XM40_10660 PF00486 Transcriptional regulatory protein, C terminal XM40_10660 PF00072 Response regulator receiver domain XM40_10665 PF01578 Cytochrome C assembly protein XM40_10670 PF05140 ResB-like family XM40_10675 PF00578 AhpC/TSA family XM40_10680 PF01479 S4 domain XM40_10680 PF00849 RNA pseudouridylate synthase XM40_10685 PF07670 Nucleoside recognition XM40_10690 PF07670 Nucleoside recognition XM40_10695 PF00768 D-alanyl-D-alanine carboxypeptidase XM40_10695 PF07943 Penicillin-binding protein 5, C-terminal domain XM40_10700 PF13047 Protein of unknown function (DUF3907) XM40_10705 PF04079 Segregation and condensation complex subunit ScpB XM40_10710 PF02616 Segregation and condensation protein ScpA XM40_10715 PF03745 Domain of unknown function (DUF309) XM40_10720 PF00583 Acetyltransferase (GNAT) family XM40_10725 PF00885 6,7-dimethyl-8-ribityllumazine synthase XM40_10730 PF00925 GTP cyclohydrolase II XM40_10730 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XM40_10735 PF00677 Lumazine binding domain XM40_10740 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XM40_10740 PF01872 RibD C-terminal domain XM40_10750 PF10502 Signal peptidase, peptidase S26 XM40_10760 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XM40_10765 PF06207 Protein of unknown function (DUF1002) XM40_10770 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XM40_10770 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XM40_10775 PF03323 Bacillus/Clostridium GerA spore germination protein XM40_10780 PF14097 Stage V sporulation protein AE1 XM40_10785 PF03862 SpoVAC/SpoVAEB sporulation membrane protein XM40_10790 PF07451 Stage V sporulation protein AD (SpoVAD) XM40_10795 PF03862 SpoVAC/SpoVAEB sporulation membrane protein XM40_10800 PF13782 Stage V sporulation protein AB XM40_10805 PF12164 Stage V sporulation protein AA XM40_10810 PF04539 Sigma-70 region 3 XM40_10810 PF04545 Sigma-70, region 4 XM40_10810 PF04542 Sigma-70 region 2 XM40_10815 PF13581 Histidine kinase-like ATPase domain XM40_10820 PF01740 STAS domain XM40_10825 PF07943 Penicillin-binding protein 5, C-terminal domain XM40_10825 PF00768 D-alanyl-D-alanine carboxypeptidase XM40_10830 PF01048 Phosphorylase superfamily XM40_10835 PF01676 Metalloenzyme superfamily XM40_10840 PF02899 Phage integrase, N-terminal SAM-like domain XM40_10840 PF00589 Phage integrase family XM40_10845 PF14004 Protein of unknown function (DUF4227) XM40_10850 PF01475 Ferric uptake regulator family XM40_10855 PF01944 Stage II sporulation protein M XM40_10870 PF00390 Malic enzyme, N-terminal domain XM40_10870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XM40_10870 PF03949 Malic enzyme, NAD binding domain XM40_10875 PF03553 Na+/H+ antiporter family XM40_10880 PF10415 Fumarase C C-terminus XM40_10880 PF00206 Lyase XM40_10885 PF00710 Asparaginase, N-terminal XM40_10885 PF17763 Glutaminase/Asparaginase C-terminal domain XM40_10890 PF01381 Helix-turn-helix XM40_10900 PF00293 NUDIX domain XM40_10905 PF13072 Mother cell inhibitor of FtsZ XM40_10910 PF00248 Aldo/keto reductase family XM40_10920 PF12146 Serine aminopeptidase, S33 XM40_10925 PF10827 Protein of unknown function (DUF2552) XM40_10930 PF01521 Iron-sulphur cluster biosynthesis XM40_10935 PF13673 Acetyltransferase (GNAT) domain XM40_10935 PF04229 GrpB protein XM40_10940 PF03992 Antibiotic biosynthesis monooxygenase XM40_10945 PF00583 Acetyltransferase (GNAT) family XM40_10950 PF00817 impB/mucB/samB family XM40_10950 PF11799 impB/mucB/samB family C-terminal domain XM40_10955 PF08863 YolD-like protein XM40_10960 PF14164 YqzH-like protein XM40_10965 PF01594 AI-2E family transporter XM40_10975 PF00485 Phosphoribulokinase / Uridine kinase family XM40_10980 PF00291 Pyridoxal-phosphate dependent enzyme XM40_10985 PF00106 short chain dehydrogenase XM40_10990 PF00753 Metallo-beta-lactamase superfamily XM40_10995 PF14748 Pyrroline-5-carboxylate reductase dimerisation XM40_10995 PF03807 NADP oxidoreductase coenzyme F420-dependent XM40_11000 PF00378 Enoyl-CoA hydratase/isomerase XM40_11005 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal XM40_11005 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal XM40_11010 PF00067 Cytochrome P450 XM40_11015 PF00550 Phosphopantetheine attachment site XM40_11015 PF08242 Methyltransferase domain XM40_11015 PF08659 KR domain XM40_11015 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_11015 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_11015 PF16197 Ketoacyl-synthetase C-terminal extension XM40_11015 PF14765 Polyketide synthase dehydratase XM40_11020 PF16197 Ketoacyl-synthetase C-terminal extension XM40_11020 PF14765 Polyketide synthase dehydratase XM40_11020 PF00550 Phosphopantetheine attachment site XM40_11020 PF08242 Methyltransferase domain XM40_11020 PF08659 KR domain XM40_11020 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_11020 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_11025 PF14765 Polyketide synthase dehydratase XM40_11025 PF08659 KR domain XM40_11025 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_11025 PF16197 Ketoacyl-synthetase C-terminal extension XM40_11025 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_11025 PF13193 AMP-binding enzyme C-terminal domain XM40_11025 PF00501 AMP-binding enzyme XM40_11025 PF00668 Condensation domain XM40_11025 PF00550 Phosphopantetheine attachment site XM40_11030 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_11030 PF00501 AMP-binding enzyme XM40_11030 PF00668 Condensation domain XM40_11030 PF16197 Ketoacyl-synthetase C-terminal extension XM40_11030 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_11030 PF00550 Phosphopantetheine attachment site XM40_11030 PF08659 KR domain XM40_11030 PF14765 Polyketide synthase dehydratase XM40_11030 PF13193 AMP-binding enzyme C-terminal domain XM40_11035 PF16197 Ketoacyl-synthetase C-terminal extension XM40_11035 PF14765 Polyketide synthase dehydratase XM40_11035 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_11035 PF00550 Phosphopantetheine attachment site XM40_11035 PF08242 Methyltransferase domain XM40_11035 PF08659 KR domain XM40_11035 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_11040 PF00550 Phosphopantetheine attachment site XM40_11040 PF00501 AMP-binding enzyme XM40_11040 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_11040 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_11040 PF08659 KR domain XM40_11040 PF16197 Ketoacyl-synthetase C-terminal extension XM40_11040 PF00668 Condensation domain XM40_11040 PF14765 Polyketide synthase dehydratase XM40_11040 PF13193 AMP-binding enzyme C-terminal domain XM40_11045 PF16197 Ketoacyl-synthetase C-terminal extension XM40_11045 PF00109 Beta-ketoacyl synthase, N-terminal domain XM40_11045 PF02801 Beta-ketoacyl synthase, C-terminal domain XM40_11045 PF08242 Methyltransferase domain XM40_11045 PF00550 Phosphopantetheine attachment site XM40_11045 PF14765 Polyketide synthase dehydratase XM40_11045 PF08659 KR domain XM40_11055 PF13193 AMP-binding enzyme C-terminal domain XM40_11055 PF00501 AMP-binding enzyme XM40_11070 PF03060 Nitronate monooxygenase XM40_11070 PF00698 Acyl transferase domain XM40_11075 PF02357 Transcription termination factor nusG XM40_11075 PF00467 KOW motif XM40_11080 PF03466 LysR substrate binding domain XM40_11080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_11090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XM40_11095 PF12146 Serine aminopeptidase, S33 XM40_11100 PF00471 Ribosomal protein L33 XM40_11105 PF12706 Beta-lactamase superfamily domain XM40_11110 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XM40_11110 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XM40_11115 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XM40_11115 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain XM40_11120 PF11798 IMS family HHH motif XM40_11120 PF11799 impB/mucB/samB family C-terminal domain XM40_11120 PF00817 impB/mucB/samB family XM40_11130 PF02096 60Kd inner membrane protein XM40_11135 PF01546 Peptidase family M20/M25/M40 XM40_11135 PF07687 Peptidase dimerisation domain XM40_11140 PF01039 Carboxyl transferase domain XM40_11150 PF03734 L,D-transpeptidase catalytic domain XM40_11155 PF06081 Aromatic acid exporter family member 1 XM40_11155 PF11728 Putative aromatic acid exporter C-terminal domain XM40_11160 PF00005 ABC transporter XM40_11165 PF00528 Binding-protein-dependent transport system inner membrane component XM40_11170 PF00497 Bacterial extracellular solute-binding proteins, family 3 XM40_11175 PF06491 Disulphide isomerase XM40_11180 PF00781 Diacylglycerol kinase catalytic domain XM40_11185 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XM40_11185 PF00364 Biotin-requiring enzyme XM40_11185 PF02817 e3 binding domain XM40_11190 PF02780 Transketolase, C-terminal domain XM40_11190 PF02779 Transketolase, pyrimidine binding domain XM40_11195 PF00676 Dehydrogenase E1 component XM40_11200 PF07992 Pyridine nucleotide-disulphide oxidoreductase XM40_11200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XM40_11205 PF00871 Acetokinase family XM40_11210 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain XM40_11210 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XM40_11215 PF01515 Phosphate acetyl/butaryl transferase XM40_11220 PF00989 PAS fold XM40_11220 PF02954 Bacterial regulatory protein, Fis family XM40_11220 PF00158 Sigma-54 interaction domain XM40_11225 PF11118 Protein of unknown function (DUF2627) XM40_11235 PF03972 MmgE/PrpD family XM40_11240 PF00285 Citrate synthase, C-terminal domain XM40_11245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XM40_11245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XM40_11245 PF02770 Acyl-CoA dehydrogenase, middle domain XM40_11250 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XM40_11250 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XM40_11255 PF00108 Thiolase, N-terminal domain XM40_11255 PF02803 Thiolase, C-terminal domain XM40_11260 PF03009 Glycerophosphoryl diester phosphodiesterase family XM40_11265 PF01520 N-acetylmuramoyl-L-alanine amidase XM40_11290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XM40_11295 PF10676 Spore germination protein gerPA/gerPF XM40_11300 PF10676 Spore germination protein gerPA/gerPF XM40_11305 PF00842 Alanine racemase, C-terminal domain XM40_11305 PF01168 Alanine racemase, N-terminal domain XM40_11310 PF00072 Response regulator receiver domain XM40_11310 PF08769 Sporulation initiation factor Spo0A C terminal XM40_11315 PF05580 SpoIVB peptidase S55 XM40_11315 PF17820 PDZ domain XM40_11320 PF13476 AAA domain XM40_11325 PF02863 Arginine repressor, C-terminal domain XM40_11325 PF01316 Arginine repressor, DNA binding domain XM40_11330 PF01479 S4 domain XM40_11330 PF01728 FtsJ-like methyltransferase XM40_11335 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XM40_11335 PF02779 Transketolase, pyrimidine binding domain XM40_11335 PF02780 Transketolase, C-terminal domain XM40_11340 PF00348 Polyprenyl synthetase XM40_11345 PF02609 Exonuclease VII small subunit XM40_11350 PF13742 OB-fold nucleic acid binding domain XM40_11350 PF02601 Exonuclease VII, large subunit XM40_11355 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XM40_11355 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XM40_11360 PF01029 NusB family XM40_11365 PF03780 Asp23 family, cell envelope-related function XM40_11370 PF02785 Biotin carboxylase C-terminal domain XM40_11370 PF00289 Biotin carboxylase, N-terminal domain XM40_11370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XM40_11375 PF00364 Biotin-requiring enzyme XM40_11380 PF12685 SpoIIIAH-like protein XM40_11390 PF09581 Stage III sporulation protein AF (Spore_III_AF) XM40_11395 PF09546 Stage III sporulation protein AE (spore_III_AE) XM40_11400 PF06686 Stage III sporulation protein AC/AD protein family XM40_11405 PF06686 Stage III sporulation protein AC/AD protein family XM40_11410 PF09548 Stage III sporulation protein AB (spore_III_AB) XM40_11420 PF10942 Protein of unknown function (DUF2619) XM40_11425 PF01132 Elongation factor P (EF-P) OB domain XM40_11425 PF09285 Elongation factor P, C-terminal XM40_11425 PF08207 Elongation factor P (EF-P) KOW-like domain XM40_11430 PF00557 Metallopeptidase family M24 XM40_11430 PF01321 Creatinase/Prolidase N-terminal domain XM40_11435 PF11085 Conserved membrane protein YqhR XM40_11440 PF07136 Protein of unknown function (DUF1385) XM40_11450 PF01734 Patatin-like phospholipase XM40_11455 PF01325 Iron dependent repressor, N-terminal DNA binding domain XM40_11455 PF02742 Iron dependent repressor, metal binding and dimerisation domain XM40_11460 PF03099 Biotin/lipoate A/B protein ligase family XM40_11465 PF00581 Rhodanese-like domain XM40_11470 PF02347 Glycine cleavage system P-protein XM40_11475 PF02347 Glycine cleavage system P-protein XM40_11480 PF01571 Aminomethyltransferase folate-binding domain XM40_11480 PF08669 Glycine cleavage T-protein C-terminal barrel domain XM40_11485 PF00271 Helicase conserved C-terminal domain XM40_11485 PF00176 SNF2 family N-terminal domain XM40_11490 PF11079 Bacterial protein YqhG of unknown function XM40_11495 PF08671 Anti-repressor SinI XM40_11500 PF08671 Anti-repressor SinI XM40_11500 PF01381 Helix-turn-helix XM40_11505 PF12389 Camelysin metallo-endopeptidase XM40_11520 PF13028 Protein of unknown function (DUF3889) XM40_11525 PF14038 YqzE-like protein XM40_11530 PF14173 ComG operon protein 7 XM40_11535 PF15980 Putative Competence protein ComGF XM40_11545 PF07963 Prokaryotic N-terminal methylation motif XM40_11550 PF07963 Prokaryotic N-terminal methylation motif XM40_11555 PF00482 Type II secretion system (T2SS), protein F XM40_11560 PF00437 Type II/IV secretion system protein XM40_11565 PF01544 CorA-like Mg2+ transporter protein XM40_11570 PF01595 Cyclin M transmembrane N-terminal domain XM40_11570 PF03471 Transporter associated domain XM40_11570 PF00571 CBS domain XM40_11575 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain XM40_11575 PF01740 STAS domain XM40_11585 PF03960 ArsC family XM40_11590 PF11117 Protein of unknown function (DUF2626) XM40_11595 PF00753 Metallo-beta-lactamase superfamily XM40_11600 PF10958 Protein of unknown function (DUF2759) XM40_11605 PF01910 Thiamine-binding protein XM40_11615 PF00246 Zinc carboxypeptidase XM40_11620 PF00480 ROK family XM40_11625 PF06014 Bacterial protein of unknown function (DUF910) XM40_11630 PF03553 Na+/H+ antiporter family XM40_11635 PF01812 5-formyltetrahydrofolate cyclo-ligase family XM40_11650 PF00005 ABC transporter XM40_11655 PF00005 ABC transporter XM40_11660 PF00528 Binding-protein-dependent transport system inner membrane component XM40_11665 PF00528 Binding-protein-dependent transport system inner membrane component XM40_11670 PF12849 PBP superfamily domain XM40_11680 PF07690 Major Facilitator Superfamily XM40_11685 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XM40_11685 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XM40_11690 PF04306 Protein of unknown function (DUF456) XM40_11695 PF06691 Protein of unknown function (DUF1189) XM40_11705 PF04551 GcpE protein XM40_11720 PF01475 Ferric uptake regulator family XM40_11725 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XM40_11725 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XM40_11730 PF11116 Protein of unknown function (DUF2624) XM40_11735 PF01261 Xylose isomerase-like TIM barrel XM40_11740 PF00270 DEAD/DEAH box helicase XM40_11740 PF00271 Helicase conserved C-terminal domain XM40_11745 PF14181 YqfQ-like protein XM40_11750 PF02401 LytB protein XM40_11755 PF01784 NIF3 (NGG1p interacting factor 3) XM40_11760 PF04816 tRNA (adenine(22)-N(1))-methyltransferase XM40_11765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XM40_11770 PF03979 Sigma-70 factor, region 1.1 XM40_11770 PF04542 Sigma-70 region 2 XM40_11770 PF04539 Sigma-70 region 3 XM40_11770 PF04545 Sigma-70, region 4 XM40_11770 PF00140 Sigma-70 factor, region 1.2 XM40_11775 PF08275 DNA primase catalytic core, N-terminal domain XM40_11775 PF01807 CHC2 zinc finger XM40_11775 PF10410 DnaB-helicase binding domain of primase XM40_11780 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 XM40_11785 PF03618 Kinase/pyrophosphorylase XM40_11790 PF00571 CBS domain XM40_11790 PF08279 HTH domain XM40_11795 PF02092 Glycyl-tRNA synthetase beta subunit XM40_11800 PF02091 Glycyl-tRNA synthetase alpha subunit XM40_11805 PF02565 Recombination protein O C terminal XM40_11805 PF11967 Recombination protein O N terminal XM40_11810 PF07650 KH domain XM40_11810 PF01926 50S ribosome-binding GTPase XM40_11815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XM40_11820 PF01219 Prokaryotic diacylglycerol kinase XM40_11825 PF02130 Uncharacterized protein family UPF0054 XM40_11830 PF07697 7TM-HD extracellular XM40_11830 PF01966 HD domain XM40_11830 PF07698 7TM receptor with intracellular HD hydrolase XM40_11835 PF02562 PhoH-like protein XM40_11840 PF06898 Putative stage IV sporulation protein YqfD XM40_11845 PF07873 YabP family XM40_11855 PF12127 SigmaW regulon antibacterial XM40_11860 PF01957 NfeD-like C-terminal, partner-binding XM40_11860 PF01972 Serine dehydrogenase proteinase XM40_11865 PF09424 Yqey-like protein XM40_11870 PF01165 Ribosomal protein S21 XM40_11875 PF02690 Na+/Pi-cotransporter XM40_11880 PF00919 Uncharacterized protein family UPF0004 XM40_11880 PF04055 Radical SAM superfamily XM40_11880 PF01938 TRAM domain XM40_11885 PF04452 RNA methyltransferase XM40_11895 PF00226 DnaJ domain XM40_11895 PF01556 DnaJ C terminal domain XM40_11895 PF00684 DnaJ central domain XM40_11900 PF00012 Hsp70 protein XM40_11905 PF01025 GrpE XM40_11910 PF01628 HrcA protein C terminal domain XM40_11915 PF04055 Radical SAM superfamily XM40_11915 PF06969 HemN C-terminal domain XM40_11920 PF00009 Elongation factor Tu GTP binding domain XM40_11920 PF00679 Elongation factor G C-terminus XM40_11920 PF03144 Elongation factor Tu domain 2 XM40_11920 PF06421 GTP-binding protein LepA C-terminus XM40_11925 PF12438 Protein of unknown function (DUF3679) XM40_11930 PF07454 Stage II sporulation protein P (SpoIIP) XM40_11935 PF03418 Germination protease XM40_11940 PF01649 Ribosomal protein S20 XM40_11945 PF06144 DNA polymerase III, delta subunit XM40_11950 PF14141 YqzM-like protein XM40_11955 PF13567 Domain of unknown function (DUF4131) XM40_11955 PF00753 Metallo-beta-lactamase superfamily XM40_11955 PF03772 Competence protein XM40_11960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XM40_11965 PF10531 SLBB domain XM40_11970 PF14748 Pyrroline-5-carboxylate reductase dimerisation XM40_11970 PF03807 NADP oxidoreductase coenzyme F420-dependent XM40_11975 PF13649 Methyltransferase domain XM40_11985 PF01966 HD domain XM40_11990 PF01467 Cytidylyltransferase-like XM40_11995 PF01985 CRS1 / YhbY (CRM) domain XM40_12000 PF18317 Shikimate 5'-dehydrogenase C-terminal domain XM40_12000 PF01488 Shikimate / quinate 5-dehydrogenase XM40_12000 PF08501 Shikimate dehydrogenase substrate binding domain XM40_12005 PF01926 50S ribosome-binding GTPase XM40_12015 PF08970 Sporulation inhibitor A XM40_12020 PF00657 GDSL-like Lipase/Acylhydrolase XM40_12025 PF01522 Polysaccharide deacetylase XM40_12030 PF09335 SNARE associated Golgi protein XM40_12040 PF04545 Sigma-70, region 4 XM40_12040 PF04542 Sigma-70 region 2 XM40_12055 PF12833 Helix-turn-helix domain XM40_12055 PF06445 GyrI-like small molecule binding domain XM40_12070 PF07690 Major Facilitator Superfamily XM40_12075 PF00583 Acetyltransferase (GNAT) family XM40_12080 PF05163 DinB family XM40_12100 PF01380 SIS domain XM40_12100 PF01418 Helix-turn-helix domain, rpiR family XM40_12105 PF01238 Phosphomannose isomerase type I XM40_12110 PF02378 Phosphotransferase system, EIIC XM40_12110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XM40_12110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XM40_12115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XM40_12115 PF00874 PRD domain XM40_12115 PF05043 Mga helix-turn-helix domain XM40_12115 PF08279 HTH domain XM40_12120 PF12706 Beta-lactamase superfamily domain XM40_12125 PF04073 Aminoacyl-tRNA editing domain XM40_12130 PF03466 LysR substrate binding domain XM40_12130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_12135 PF07690 Major Facilitator Superfamily XM40_12140 PF00258 Flavodoxin XM40_12140 PF00067 Cytochrome P450 XM40_12140 PF00175 Oxidoreductase NAD-binding domain XM40_12140 PF00667 FAD binding domain XM40_12145 PF00440 Bacterial regulatory proteins, tetR family XM40_12145 PF16295 Tetracyclin repressor-like, C-terminal domain XM40_12150 PF08241 Methyltransferase domain XM40_12160 PF01226 Formate/nitrite transporter XM40_12165 PF10057 Uncharacterized conserved protein (DUF2294) XM40_12170 PF00037 4Fe-4S binding domain XM40_12170 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XM40_12170 PF00384 Molybdopterin oxidoreductase XM40_12170 PF01568 Molydopterin dinucleotide binding domain XM40_12170 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XM40_12175 PF07849 Protein of unknown function (DUF1641) XM40_12180 PF14143 YrhC-like protein XM40_12185 PF01053 Cys/Met metabolism PLP-dependent enzyme XM40_12190 PF00291 Pyridoxal-phosphate dependent enzyme XM40_12195 PF01048 Phosphorylase superfamily XM40_12200 PF13649 Methyltransferase domain XM40_12205 PF10750 Protein of unknown function (DUF2536) XM40_12210 PF07423 Domain of unknown function (DUF1510) XM40_12215 PF03717 Penicillin-binding Protein dimerisation domain XM40_12215 PF00905 Penicillin binding protein transpeptidase domain XM40_12220 PF01272 Transcription elongation factor, GreA/GreB, C-term XM40_12220 PF03449 Transcription elongation factor, N-terminal XM40_12225 PF00485 Phosphoribulokinase / Uridine kinase family XM40_12245 PF02618 YceG-like family XM40_12250 PF06949 Protein of unknown function (DUF1292) XM40_12255 PF03652 Holliday junction resolvase XM40_12260 PF06135 IreB regulatory phosphoprotein XM40_12265 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XM40_12265 PF01411 tRNA synthetases class II (A) XM40_12265 PF02272 DHHA1 domain XM40_12270 PF01594 AI-2E family transporter XM40_12275 PF00005 ABC transporter XM40_12280 PF00497 Bacterial extracellular solute-binding proteins, family 3 XM40_12285 PF00528 Binding-protein-dependent transport system inner membrane component XM40_12290 PF00528 Binding-protein-dependent transport system inner membrane component XM40_12300 PF05239 PRC-barrel domain XM40_12305 PF13538 UvrD-like helicase C-terminal domain XM40_12305 PF14490 Helix-hairpin-helix containing domain XM40_12305 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain XM40_12310 PF13181 Tetratricopeptide repeat XM40_12310 PF07719 Tetratricopeptide repeat XM40_12320 PF00266 Aminotransferase class-V XM40_12325 PF02082 Transcriptional regulator XM40_12330 PF16193 AAA C-terminal domain XM40_12330 PF05496 Holliday junction DNA helicase RuvB P-loop domain XM40_12330 PF12002 MgsA AAA+ ATPase C terminal XM40_12335 PF00899 ThiF family XM40_12340 PF01336 OB-fold nucleic acid binding domain XM40_12340 PF00152 tRNA synthetases class II (D, K and N) XM40_12340 PF02938 GAD domain XM40_12345 PF03129 Anticodon binding domain XM40_12345 PF13393 Histidyl-tRNA synthetase XM40_12350 PF08239 Bacterial SH3 domain XM40_12350 PF01520 N-acetylmuramoyl-L-alanine amidase XM40_12355 PF02580 D-Tyr-tRNA(Tyr) deacylase XM40_12360 PF02824 TGS domain XM40_12360 PF04607 Region found in RelA / SpoT proteins XM40_12360 PF13291 ACT domain XM40_12365 PF00156 Phosphoribosyl transferase domain XM40_12370 PF10141 Single-strand DNA-specific exonuclease, C terminal domain XM40_12370 PF17768 RecJ OB domain XM40_12370 PF02272 DHHA1 domain XM40_12370 PF01368 DHH family XM40_12375 PF06305 Lipopolysaccharide assembly protein A domain XM40_12380 PF02080 TrkA-C domain XM40_12385 PF02355 Protein export membrane protein XM40_12385 PF07549 SecD/SecF GG Motif XM40_12390 PF13797 Post-transcriptional regulator XM40_12395 PF01943 Polysaccharide biosynthesis protein XM40_12395 PF14667 Polysaccharide biosynthesis C-terminal domain XM40_12400 PF04239 Protein of unknown function (DUF421) XM40_12405 PF12670 Protein of unknown function (DUF3792) XM40_12410 PF02699 Preprotein translocase subunit XM40_12415 PF01702 Queuine tRNA-ribosyltransferase XM40_12420 PF02547 Queuosine biosynthesis protein XM40_12425 PF11146 Protein of unknown function (DUF2905) XM40_12430 PF17864 RuvB AAA lid domain XM40_12430 PF05491 RuvB C-terminal winged helix domain XM40_12430 PF05496 Holliday junction DNA helicase RuvB P-loop domain XM40_12435 PF01330 RuvA N terminal domain XM40_12435 PF07499 RuvA, C-terminal domain XM40_12440 PF08955 BofC C-terminal domain XM40_12440 PF08977 Bypass of Forespore C, N terminal XM40_12450 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) XM40_12455 PF01476 LysM domain XM40_12460 PF02445 Quinolinate synthetase A protein XM40_12465 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain XM40_12465 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain XM40_12470 PF02910 Fumarate reductase flavoprotein C-term XM40_12470 PF00890 FAD binding domain XM40_12475 PF00266 Aminotransferase class-V XM40_12480 PF08279 HTH domain XM40_12480 PF02829 3H domain XM40_12485 PF01842 ACT domain XM40_12485 PF00800 Prephenate dehydratase XM40_12490 PF01842 ACT domain XM40_12495 PF09269 Domain of unknown function (DUF1967) XM40_12495 PF01926 50S ribosome-binding GTPase XM40_12495 PF01018 GTP1/OBG XM40_12500 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain XM40_12500 PF14682 Sporulation initiation phospho-transferase B, C-terminal XM40_12505 PF01016 Ribosomal L27 protein XM40_12510 PF04327 Cysteine protease Prp XM40_12515 PF00829 Ribosomal prokaryotic L21 protein XM40_12520 PF02163 Peptidase family M50 XM40_12525 PF01551 Peptidase family M23 XM40_12530 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XM40_12535 PF03775 Septum formation inhibitor MinC, C-terminal domain XM40_12540 PF04093 rod shape-determining protein MreD XM40_12545 PF04085 rod shape-determining protein MreC XM40_12555 PF04002 RadC-like JAB domain XM40_12560 PF02545 Maf-like protein XM40_12565 PF05036 Sporulation related domain XM40_12570 PF06750 Bacterial Peptidase A24 N-terminal domain XM40_12570 PF01478 Type IV leader peptidase family XM40_12575 PF08245 Mur ligase middle domain XM40_12575 PF02875 Mur ligase family, glutamate ligase domain XM40_12580 PF00133 tRNA synthetases class I (I, L, M and V) XM40_12580 PF10458 Valyl tRNA synthetase tRNA binding arm XM40_12580 PF08264 Anticodon-binding domain of tRNA XM40_12595 PF01476 LysM domain XM40_12600 PF00202 Aminotransferase class-III XM40_12605 PF00490 Delta-aminolevulinic acid dehydratase XM40_12610 PF02602 Uroporphyrinogen-III synthase HemD XM40_12615 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XM40_12615 PF03900 Porphobilinogen deaminase, C-terminal domain XM40_12620 PF01578 Cytochrome C assembly protein XM40_12625 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XM40_12625 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XM40_12625 PF01488 Shikimate / quinate 5-dehydrogenase XM40_12635 PF01926 50S ribosome-binding GTPase XM40_12640 PF02190 ATP-dependent protease La (LON) substrate-binding domain XM40_12640 PF05362 Lon protease (S16) C-terminal proteolytic domain XM40_12640 PF00004 ATPase family associated with various cellular activities (AAA) XM40_12645 PF05362 Lon protease (S16) C-terminal proteolytic domain XM40_12645 PF00004 ATPase family associated with various cellular activities (AAA) XM40_12650 PF10431 C-terminal, D2-small domain, of ClpB protein XM40_12650 PF06689 ClpX C4-type zinc finger XM40_12650 PF07724 AAA domain (Cdc48 subfamily) XM40_12655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XM40_12655 PF05698 Bacterial trigger factor protein (TF) C-terminus XM40_12655 PF05697 Bacterial trigger factor protein (TF) XM40_12665 PF00694 Aconitase C-terminal domain XM40_12670 PF00330 Aconitase family (aconitate hydratase) XM40_12675 PF00180 Isocitrate/isopropylmalate dehydrogenase XM40_12680 PF08502 LeuA allosteric (dimerisation) domain XM40_12680 PF00682 HMGL-like XM40_12685 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain XM40_12685 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XM40_12690 PF10369 Small subunit of acetolactate synthase XM40_12690 PF01842 ACT domain XM40_12695 PF00205 Thiamine pyrophosphate enzyme, central domain XM40_12695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XM40_12695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XM40_12720 PF02384 N-6 DNA Methylase XM40_12725 PF00271 Helicase conserved C-terminal domain XM40_12725 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XM40_12725 PF08463 EcoEI R protein C-terminal XM40_12725 PF04851 Type III restriction enzyme, res subunit XM40_12745 PF12850 Calcineurin-like phosphoesterase superfamily domain XM40_12750 PF01725 Ham1 family XM40_12755 PF01138 3' exoribonuclease family, domain 1 XM40_12755 PF03725 3' exoribonuclease family, domain 2 XM40_12760 PF10646 Sporulation and spore germination XM40_12765 PF01177 Asp/Glu/Hydantoin racemase XM40_12770 PF01047 MarR family XM40_12775 PF00196 Bacterial regulatory proteins, luxR family XM40_12780 PF03061 Thioesterase superfamily XM40_12785 PF13183 4Fe-4S dicluster domain XM40_12785 PF13085 2Fe-2S iron-sulfur cluster binding domain XM40_12790 PF00890 FAD binding domain XM40_12790 PF02910 Fumarate reductase flavoprotein C-term XM40_12795 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XM40_12800 PF10702 Protein of unknown function (DUF2507) XM40_12805 PF01842 ACT domain XM40_12805 PF13840 ACT domain XM40_12805 PF00696 Amino acid kinase family XM40_12810 PF02151 UvrB/uvrC motif XM40_12810 PF08459 UvrC Helix-hairpin-helix N-terminal XM40_12810 PF01541 GIY-YIG catalytic domain XM40_12815 PF00085 Thioredoxin XM40_12820 PF06964 Alpha-L-arabinofuranosidase C-terminal domain XM40_12825 PF01012 Electron transfer flavoprotein domain XM40_12825 PF00766 Electron transfer flavoprotein FAD-binding domain XM40_12830 PF01012 Electron transfer flavoprotein domain XM40_12835 PF00378 Enoyl-CoA hydratase/isomerase XM40_12840 PF08359 YsiA-like protein, C-terminal region XM40_12840 PF00440 Bacterial regulatory proteins, tetR family XM40_12845 PF00501 AMP-binding enzyme XM40_12845 PF13193 AMP-binding enzyme C-terminal domain XM40_12855 PF03994 Domain of Unknown Function (DUF350) XM40_12860 PF00488 MutS domain V XM40_12860 PF01713 Smr domain XM40_12865 PF02811 PHP domain XM40_12865 PF14716 Helix-hairpin-helix domain XM40_12865 PF14791 DNA polymerase beta thumb XM40_12870 PF02674 Colicin V production protein XM40_12875 PF05164 Cell division protein ZapA XM40_12880 PF11858 Domain of unknown function (DUF3378) XM40_12880 PF01351 Ribonuclease HII XM40_12885 PF03483 B3/4 domain XM40_12885 PF03484 tRNA synthetase B5 domain XM40_12885 PF01588 Putative tRNA binding domain XM40_12885 PF03147 Ferredoxin-fold anticodon binding domain XM40_12885 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain XM40_12890 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XM40_12890 PF01409 tRNA synthetases class II core domain (F) XM40_12895 PF00588 SpoU rRNA Methylase family XM40_12895 PF08032 RNA 2'-O ribose methyltransferase substrate binding XM40_12900 PF14098 Small, acid-soluble spore protein I XM40_12905 PF13556 PucR C-terminal helix-turn-helix domain XM40_12905 PF17853 GGDEF-like domain XM40_12905 PF05651 Putative sugar diacid recognition XM40_12910 PF02913 FAD linked oxidases, C-terminal domain XM40_12910 PF01565 FAD binding domain XM40_12915 PF13183 4Fe-4S dicluster domain XM40_12915 PF02754 Cysteine-rich domain XM40_12920 PF13722 5TM C-terminal transporter carbon starvation CstA XM40_12920 PF02554 Carbon starvation protein CstA XM40_12925 PF06964 Alpha-L-arabinofuranosidase C-terminal domain XM40_12930 PF00528 Binding-protein-dependent transport system inner membrane component XM40_12935 PF00528 Binding-protein-dependent transport system inner membrane component XM40_12940 PF01547 Bacterial extracellular solute-binding protein XM40_12945 PF13685 Iron-containing alcohol dehydrogenase XM40_12950 PF13344 Haloacid dehalogenase-like hydrolase XM40_12955 PF00596 Class II Aldolase and Adducin N-terminal domain XM40_12960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XM40_12960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XM40_12965 PF11762 L-arabinose isomerase C-terminal domain XM40_12965 PF02610 L-arabinose isomerase XM40_12970 PF04616 Glycosyl hydrolases family 43 XM40_12975 PF05343 M42 glutamyl aminopeptidase XM40_12985 PF06961 Protein of unknown function (DUF1294) XM40_12990 PF00453 Ribosomal protein L20 XM40_12995 PF01632 Ribosomal protein L35 XM40_13000 PF05198 Translation initiation factor IF-3, N-terminal domain XM40_13000 PF00707 Translation initiation factor IF-3, C-terminal domain XM40_13005 PF04172 LrgB-like family XM40_13010 PF03788 LrgA family XM40_13015 PF00072 Response regulator receiver domain XM40_13015 PF04397 LytTr DNA-binding domain XM40_13020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_13020 PF07694 5TMR of 5TMR-LYT XM40_13020 PF06580 Histidine kinase XM40_13030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XM40_13030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XM40_13030 PF03129 Anticodon binding domain XM40_13030 PF02824 TGS domain XM40_13035 PF08812 YtxC-like family XM40_13040 PF09335 SNARE associated Golgi protein XM40_13045 PF07319 Primosomal protein DnaI N-terminus XM40_13045 PF01695 IstB-like ATP binding protein XM40_13050 PF07261 Replication initiation and membrane attachment XM40_13055 PF03477 ATP cone domain XM40_13060 PF02675 S-adenosylmethionine decarboxylase XM40_13065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XM40_13065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XM40_13070 PF01638 HxlR-like helix-turn-helix XM40_13075 PF07690 Major Facilitator Superfamily XM40_13080 PF00248 Aldo/keto reductase family XM40_13085 PF01121 Dephospho-CoA kinase XM40_13090 PF02659 Putative manganese efflux pump XM40_13095 PF06827 Zinc finger found in FPG and IleRS XM40_13095 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XM40_13095 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XM40_13100 PF01367 5'-3' exonuclease, C-terminal SAM fold XM40_13100 PF00476 DNA polymerase family A XM40_13100 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XM40_13105 PF16736 Single Cache-like XM40_13105 PF00989 PAS fold XM40_13105 PF00512 His Kinase A (phospho-acceptor) domain XM40_13105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_13110 PF00486 Transcriptional regulatory protein, C terminal XM40_13110 PF00072 Response regulator receiver domain XM40_13115 PF00056 lactate/malate dehydrogenase, NAD binding domain XM40_13115 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XM40_13120 PF00180 Isocitrate/isopropylmalate dehydrogenase XM40_13125 PF00285 Citrate synthase, C-terminal domain XM40_13130 PF11208 Protein of unknown function (DUF2992) XM40_13135 PF04284 Protein of unknown function (DUF441) XM40_13140 PF01594 AI-2E family transporter XM40_13145 PF04186 FxsA cytoplasmic membrane protein XM40_13150 PF02887 Pyruvate kinase, alpha/beta domain XM40_13150 PF00391 PEP-utilising enzyme, mobile domain XM40_13150 PF00224 Pyruvate kinase, barrel domain XM40_13155 PF00365 Phosphofructokinase XM40_13160 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XM40_13165 PF17848 Acetyl-coA carboxylase zinc finger domain XM40_13165 PF01039 Carboxyl transferase domain XM40_13175 PF03949 Malic enzyme, NAD binding domain XM40_13175 PF00390 Malic enzyme, N-terminal domain XM40_13180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XM40_13180 PF14579 Helix-hairpin-helix motif XM40_13180 PF02811 PHP domain XM40_13180 PF01336 OB-fold nucleic acid binding domain XM40_13180 PF07733 Bacterial DNA polymerase III alpha NTPase domain XM40_13185 PF14034 Sporulation protein YtrH XM40_13200 PF02272 DHHA1 domain XM40_13200 PF01368 DHH family XM40_13205 PF14007 YtpI-like protein XM40_13210 PF00392 Bacterial regulatory proteins, gntR family XM40_13210 PF07085 DRTGG domain XM40_13210 PF00571 CBS domain XM40_13210 PF03061 Thioesterase superfamily XM40_13225 PF14698 Argininosuccinate lyase C-terminal XM40_13225 PF00206 Lyase XM40_13230 PF00764 Arginosuccinate synthase XM40_13235 PF00994 Probable molybdopterin binding domain XM40_13240 PF00871 Acetokinase family XM40_13245 PF02384 N-6 DNA Methylase XM40_13250 PF08534 Redoxin XM40_13255 PF09579 Sporulation protein YtfJ (Spore_YtfJ) XM40_13260 PF11167 Protein of unknown function (DUF2953) XM40_13265 PF06271 RDD family XM40_13270 PF01343 Peptidase family S49 XM40_13275 PF01513 ATP-NAD kinase XM40_13280 PF07969 Amidohydrolase family XM40_13285 PF00501 AMP-binding enzyme XM40_13285 PF13193 AMP-binding enzyme C-terminal domain XM40_13290 PF00269 Small, acid-soluble spore proteins, alpha/beta type XM40_13295 PF02926 THUMP domain XM40_13295 PF02568 Thiamine biosynthesis protein (ThiI) XM40_13300 PF00266 Aminotransferase class-V XM40_13305 PF05525 Branched-chain amino acid transport protein XM40_13310 PF06160 Septation ring formation regulator, EzrA XM40_13315 PF02811 PHP domain XM40_13320 PF00440 Bacterial regulatory proteins, tetR family XM40_13325 PF13185 GAF domain XM40_13330 PF00990 Diguanylate cyclase, GGDEF domain XM40_13335 PF01479 S4 domain XM40_13335 PF00163 Ribosomal protein S4/S9 N-terminal domain XM40_13340 PF00171 Aldehyde dehydrogenase family XM40_13345 PF09346 SMI1 / KNR4 family (SUKH-1) XM40_13350 PF00175 Oxidoreductase NAD-binding domain XM40_13350 PF00042 Globin XM40_13350 PF00970 Oxidoreductase FAD-binding domain XM40_13360 PF01965 DJ-1/PfpI family XM40_13375 PF16916 Dimerisation domain of Zinc Transporter XM40_13375 PF01545 Cation efflux family XM40_13380 PF11495 Archaeal transcriptional regulator TrmB XM40_13380 PF01978 Sugar-specific transcriptional regulator TrmB XM40_13395 PF00579 tRNA synthetases class I (W and Y) XM40_13395 PF01479 S4 domain XM40_13400 PF13193 AMP-binding enzyme C-terminal domain XM40_13400 PF00501 AMP-binding enzyme XM40_13405 PF00583 Acetyltransferase (GNAT) family XM40_13410 PF00571 CBS domain XM40_13415 PF00850 Histone deacetylase domain XM40_13420 PF13677 Membrane MotB of proton-channel complex MotA/MotB XM40_13420 PF00691 OmpA family XM40_13425 PF01618 MotA/TolQ/ExbB proton channel family XM40_13430 PF00356 Bacterial regulatory proteins, lacI family XM40_13435 PF00793 DAHP synthetase I family XM40_13435 PF01817 Chorismate mutase type II XM40_13440 PF11009 Protein of unknown function (DUF2847) XM40_13445 PF12732 YtxH-like protein XM40_13450 PF06103 Bacterial protein of unknown function (DUF948) XM40_13455 PF01225 Mur ligase family, catalytic domain XM40_13455 PF02875 Mur ligase family, glutamate ligase domain XM40_13455 PF08245 Mur ligase middle domain XM40_13460 PF17854 FtsK alpha domain XM40_13460 PF01580 FtsK/SpoIIIE family XM40_13460 PF09397 Ftsk gamma domain XM40_13465 PF01588 Putative tRNA binding domain XM40_13465 PF14794 Domain of unknown function (DUF4479) XM40_13470 PF07285 Protein of unknown function (DUF1444) XM40_13475 PF00085 Thioredoxin XM40_13480 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ XM40_13485 PF05343 M42 glutamyl aminopeptidase XM40_13490 PF03413 Peptidase propeptide and YPEB domain XM40_13495 PF00390 Malic enzyme, N-terminal domain XM40_13495 PF03949 Malic enzyme, NAD binding domain XM40_13500 PF00753 Metallo-beta-lactamase superfamily XM40_13505 PF02390 Putative methyltransferase XM40_13510 PF14165 YtzH-like protein XM40_13515 PF01636 Phosphotransferase enzyme family XM40_13520 PF00781 Diacylglycerol kinase catalytic domain XM40_13535 PF00291 Pyridoxal-phosphate dependent enzyme XM40_13540 PF01546 Peptidase family M20/M25/M40 XM40_13545 PF00860 Permease family XM40_13550 PF05975 Bacterial ABC transporter protein EcsB XM40_13555 PF00005 ABC transporter XM40_13560 PF08220 DeoR-like helix-turn-helix domain XM40_13565 PF01479 S4 domain XM40_13565 PF00849 RNA pseudouridylate synthase XM40_13570 PF01943 Polysaccharide biosynthesis protein XM40_13570 PF14667 Polysaccharide biosynthesis C-terminal domain XM40_13580 PF02028 BCCT, betaine/carnitine/choline family transporter XM40_13585 PF10957 Sporulation protein Cse60 XM40_13610 PF11975 Family 4 glycosyl hydrolase C-terminal domain XM40_13610 PF02056 Family 4 glycosyl hydrolase XM40_13620 PF00581 Rhodanese-like domain XM40_13625 PF09334 tRNA synthetases class I (M) XM40_13625 PF00133 tRNA synthetases class I (I, L, M and V) XM40_13625 PF08264 Anticodon-binding domain of tRNA XM40_13625 PF13603 Leucyl-tRNA synthetase, Domain 2 XM40_13630 PF14074 Protein of unknown function (DUF4257) XM40_13635 PF13426 PAS domain XM40_13635 PF01740 STAS domain XM40_13640 PF07690 Major Facilitator Superfamily XM40_13645 PF09529 Integral membrane protein (intg_mem_TP0381) XM40_13650 PF02687 FtsX-like permease family XM40_13655 PF00005 ABC transporter XM40_13660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_13665 PF00072 Response regulator receiver domain XM40_13665 PF00486 Transcriptional regulatory protein, C terminal XM40_13670 PF02687 FtsX-like permease family XM40_13670 PF12704 MacB-like periplasmic core domain XM40_13675 PF00005 ABC transporter XM40_13695 PF00005 ABC transporter XM40_13700 PF00392 Bacterial regulatory proteins, gntR family XM40_13705 PF10732 Protein of unknown function (DUF2524) XM40_13710 PF16199 Radical_SAM C-terminal domain XM40_13710 PF04055 Radical SAM superfamily XM40_13715 PF06962 Putative rRNA methylase XM40_13725 PF03009 Glycerophosphoryl diester phosphodiesterase family XM40_13730 PF10776 Protein of unknown function (DUF2600) XM40_13735 PF12146 Serine aminopeptidase, S33 XM40_13740 PF00132 Bacterial transferase hexapeptide (six repeats) XM40_13745 PF00324 Amino acid permease XM40_13750 PF00733 Asparagine synthase XM40_13750 PF13537 Glutamine amidotransferase domain XM40_13755 PF00438 S-adenosylmethionine synthetase, N-terminal domain XM40_13755 PF02772 S-adenosylmethionine synthetase, central domain XM40_13755 PF02773 S-adenosylmethionine synthetase, C-terminal domain XM40_13760 PF01293 Phosphoenolpyruvate carboxykinase XM40_13765 PF10763 Protein of unknown function (DUF2584) XM40_13770 PF00326 Prolyl oligopeptidase family XM40_13780 PF00005 ABC transporter XM40_13785 PF00528 Binding-protein-dependent transport system inner membrane component XM40_13790 PF00293 NUDIX domain XM40_13795 PF05105 Bacteriophage holin family XM40_13800 PF00210 Ferritin-like domain XM40_13810 PF13115 YtkA-like XM40_13815 PF02664 S-Ribosylhomocysteinase (LuxS) XM40_13820 PF01809 Putative membrane protein insertion efficiency factor XM40_13825 PF00484 Carbonic anhydrase XM40_13830 PF01197 Ribosomal protein L31 XM40_13835 PF01654 Cytochrome bd terminal oxidase subunit I XM40_13840 PF02322 Cytochrome bd terminal oxidase subunit II XM40_13845 PF13378 Enolase C-terminal domain-like XM40_13845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XM40_13850 PF13193 AMP-binding enzyme C-terminal domain XM40_13850 PF00501 AMP-binding enzyme XM40_13855 PF00378 Enoyl-CoA hydratase/isomerase XM40_13860 PF00561 alpha/beta hydrolase fold XM40_13865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XM40_13865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XM40_13865 PF16582 Middle domain of thiamine pyrophosphate XM40_13870 PF00425 chorismate binding enzyme XM40_13875 PF01258 Prokaryotic dksA/traR C4-type zinc finger XM40_13880 PF03073 TspO/MBR family XM40_14010 PF09515 Thiamine transporter protein (Thia_YuaJ) XM40_14015 PF01145 SPFH domain / Band 7 family XM40_14015 PF15975 Flotillin XM40_14025 PF12867 DinB superfamily XM40_14035 PF00465 Iron-containing alcohol dehydrogenase XM40_14050 PF17735 Biofilm surface layer A XM40_14055 PF02254 TrkA-N domain XM40_14055 PF02080 TrkA-C domain XM40_14060 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XM40_14060 PF13457 GW (Gly-Tryp) dipeptide domain XM40_14065 PF00175 Oxidoreductase NAD-binding domain XM40_14065 PF00042 Globin XM40_14065 PF00970 Oxidoreductase FAD-binding domain XM40_14085 PF02673 Bacitracin resistance protein BacA XM40_14090 PF01594 AI-2E family transporter XM40_14095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XM40_14095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XM40_14100 PF01965 DJ-1/PfpI family XM40_14105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XM40_14105 PF00672 HAMP domain XM40_14105 PF02743 Cache domain XM40_14110 PF02743 Cache domain XM40_14110 PF00672 HAMP domain XM40_14110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XM40_14115 PF00672 HAMP domain XM40_14115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XM40_14115 PF02743 Cache domain XM40_14120 PF02743 Cache domain XM40_14120 PF00672 HAMP domain XM40_14120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XM40_14135 PF03060 Nitronate monooxygenase XM40_14140 PF01894 Uncharacterised protein family UPF0047 XM40_14145 PF00128 Alpha amylase, catalytic domain XM40_14145 PF16657 Maltogenic Amylase, C-terminal domain XM40_14150 PF00571 CBS domain XM40_14150 PF01595 Cyclin M transmembrane N-terminal domain XM40_14150 PF03471 Transporter associated domain XM40_14155 PF04298 Putative neutral zinc metallopeptidase XM40_14165 PF11458 Membrane-integrating protein Mistic XM40_14170 PF02254 TrkA-N domain XM40_14170 PF07885 Ion channel XM40_14175 PF08868 YugN-like family XM40_14185 PF00342 Phosphoglucose isomerase XM40_14195 PF00857 Isochorismatase family XM40_14200 PF00465 Iron-containing alcohol dehydrogenase XM40_14205 PF00465 Iron-containing alcohol dehydrogenase XM40_14210 PF04070 Domain of unknown function (DUF378) XM40_14215 PF00575 S1 RNA binding domain XM40_14220 PF00155 Aminotransferase class I and II XM40_14225 PF01037 Lrp/AsnC ligand binding domain XM40_14230 PF00561 alpha/beta hydrolase fold XM40_14230 PF08386 TAP-like protein XM40_14235 PF08958 Domain of unknown function (DUF1871) XM40_14240 PF00155 Aminotransferase class I and II XM40_14245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_14245 PF00512 His Kinase A (phospho-acceptor) domain XM40_14250 PF08810 Kinase associated protein B XM40_14255 PF00929 Exonuclease XM40_14260 PF07690 Major Facilitator Superfamily XM40_14265 PF00912 Transglycosylase XM40_14265 PF00905 Penicillin binding protein transpeptidase domain XM40_14270 PF04134 Protein of unknown function, DUF393 XM40_14275 PF17328 Family of unknown function (DUF5366) XM40_14280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_14280 PF17203 Single cache domain 3 XM40_14280 PF00989 PAS fold XM40_14280 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain XM40_14285 PF00072 Response regulator receiver domain XM40_14315 PF00361 Proton-conducting membrane transporter XM40_14315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XM40_14315 PF13244 Domain of unknown function (DUF4040) XM40_14320 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter XM40_14325 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XM40_14330 PF00361 Proton-conducting membrane transporter XM40_14335 PF01899 Na+/H+ ion antiporter subunit XM40_14340 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) XM40_14345 PF03334 Na+/H+ antiporter subunit XM40_14350 PF03061 Thioesterase superfamily XM40_14355 PF00072 Response regulator receiver domain XM40_14355 PF00196 Bacterial regulatory proteins, luxR family XM40_14360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_14360 PF07730 Histidine kinase XM40_14370 PF00348 Polyprenyl synthetase XM40_14375 PF08181 DegQ (SacQ) family XM40_14385 PF00563 EAL domain XM40_14385 PF08668 HDOD domain XM40_14390 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain XM40_14390 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain XM40_14390 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XM40_14395 PF00857 Isochorismatase family XM40_14400 PF07997 Protein of unknown function (DUF1694) XM40_14405 PF14166 YueH-like protein XM40_14410 PF10676 Spore germination protein gerPA/gerPF XM40_14415 PF01594 AI-2E family transporter XM40_14420 PF10842 Protein of unknown function (DUF2642) XM40_14425 PF01966 HD domain XM40_14430 PF00106 short chain dehydrogenase XM40_14435 PF17355 Family of unknown function (DUF5383) XM40_14445 PF01580 FtsK/SpoIIIE family XM40_14445 PF12538 DNA transporter XM40_14450 PF10140 WXG100 protein secretion system (Wss), protein YukC XM40_14455 PF08817 WXG100 protein secretion system (Wss), protein YukD XM40_14460 PF06013 Proteins of 100 residues with WXG XM40_14465 PF06018 CodY GAF-like domain XM40_14465 PF13556 PucR C-terminal helix-turn-helix domain XM40_14465 PF17853 GGDEF-like domain XM40_14470 PF01262 Alanine dehydrogenase/PNT, C-terminal domain XM40_14470 PF05222 Alanine dehydrogenase/PNT, N-terminal domain XM40_14475 PF10042 Uncharacterized conserved protein (DUF2278) XM40_14480 PF03621 MbtH-like protein XM40_14485 PF00501 AMP-binding enzyme XM40_14485 PF00975 Thioesterase domain XM40_14485 PF00550 Phosphopantetheine attachment site XM40_14485 PF00668 Condensation domain XM40_14485 PF13193 AMP-binding enzyme C-terminal domain XM40_14490 PF00857 Isochorismatase family XM40_14490 PF00550 Phosphopantetheine attachment site XM40_14495 PF13193 AMP-binding enzyme C-terminal domain XM40_14495 PF00501 AMP-binding enzyme XM40_14500 PF00425 chorismate binding enzyme XM40_14505 PF00106 short chain dehydrogenase XM40_14510 PF00756 Putative esterase XM40_14515 PF00174 Oxidoreductase molybdopterin binding domain XM40_14520 PF02632 BioY family XM40_14525 PF03553 Na+/H+ antiporter family XM40_14525 PF13726 Na+-H+ antiporter family XM40_14530 PF02789 Cytosol aminopeptidase family, N-terminal domain XM40_14530 PF00883 Cytosol aminopeptidase family, catalytic domain XM40_14535 PF02681 Divergent PAP2 family XM40_14540 PF06725 3D domain XM40_14545 PF14068 Putative membrane protein XM40_14550 PF07992 Pyridine nucleotide-disulphide oxidoreductase XM40_14560 PF07992 Pyridine nucleotide-disulphide oxidoreductase XM40_14565 PF00478 IMP dehydrogenase / GMP reductase domain XM40_14580 PF00005 ABC transporter XM40_14605 PF00106 short chain dehydrogenase XM40_14610 PF01521 Iron-sulphur cluster biosynthesis XM40_14615 PF01678 Diaminopimelate epimerase XM40_14620 PF01773 Na+ dependent nucleoside transporter N-terminus XM40_14620 PF07662 Na+ dependent nucleoside transporter C-terminus XM40_14625 PF07293 Protein of unknown function (DUF1450) XM40_14630 PF07992 Pyridine nucleotide-disulphide oxidoreductase XM40_14635 PF07315 Protein of unknown function (DUF1462) XM40_14640 PF01106 NifU-like domain XM40_14645 PF07676 WD40-like Beta Propeller Repeat XM40_14645 PF00326 Prolyl oligopeptidase family XM40_14650 PF00288 GHMP kinases N terminal domain XM40_14650 PF08544 GHMP kinases C terminal XM40_14655 PF00291 Pyridoxal-phosphate dependent enzyme XM40_14660 PF01842 ACT domain XM40_14660 PF00742 Homoserine dehydrogenase XM40_14660 PF03447 Homoserine dehydrogenase, NAD binding domain XM40_14670 PF04608 Phosphatidylglycerophosphatase A XM40_14675 PF13344 Haloacid dehalogenase-like hydrolase XM40_14680 PF01934 Protein of unknown function DUF86 XM40_14685 PF06265 Protein of unknown function (DUF1027) XM40_14690 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family XM40_14690 PF04055 Radical SAM superfamily XM40_14695 PF01551 Peptidase family M23 XM40_14700 PF09560 Sporulation protein YunB (Spo_YunB) XM40_14705 PF02872 5'-nucleotidase, C-terminal domain XM40_14710 PF01925 Sulfite exporter TauE/SafE XM40_14715 PF01904 Protein of unknown function DUF72 XM40_14725 PF01979 Amidohydrolase family XM40_14730 PF07905 Purine catabolism regulatory protein-like family XM40_14730 PF13556 PucR C-terminal helix-turn-helix domain XM40_14730 PF17853 GGDEF-like domain XM40_14755 PF07690 Major Facilitator Superfamily XM40_14760 PF00266 Aminotransferase class-V XM40_14765 PF01546 Peptidase family M20/M25/M40 XM40_14770 PF04231 Endonuclease I XM40_14775 PF17912 MalK OB fold domain XM40_14775 PF03459 TOBE domain XM40_14775 PF00005 ABC transporter XM40_14780 PF07702 UTRA domain XM40_14780 PF00392 Bacterial regulatory proteins, gntR family XM40_14785 PF00294 pfkB family carbohydrate kinase XM40_14790 PF00528 Binding-protein-dependent transport system inner membrane component XM40_14795 PF00528 Binding-protein-dependent transport system inner membrane component XM40_14800 PF01547 Bacterial extracellular solute-binding protein XM40_14805 PF01380 SIS domain XM40_14810 PF07853 Protein of unknown function (DUF1648) XM40_14815 PF01541 GIY-YIG catalytic domain XM40_14820 PF01266 FAD dependent oxidoreductase XM40_14830 PF01374 Glycosyl hydrolase family 46 XM40_14835 PF01458 Uncharacterized protein family (UPF0051) XM40_14840 PF01592 NifU-like N terminal domain XM40_14845 PF00266 Aminotransferase class-V XM40_14850 PF01458 Uncharacterized protein family (UPF0051) XM40_14855 PF00005 ABC transporter XM40_14860 PF02627 Carboxymuconolactone decarboxylase family XM40_14865 PF03180 NLPA lipoprotein XM40_14870 PF00528 Binding-protein-dependent transport system inner membrane component XM40_14875 PF09383 NIL domain XM40_14875 PF00005 ABC transporter XM40_14880 PF02036 SCP-2 sterol transfer family XM40_14885 PF00085 Thioredoxin XM40_14890 PF01751 Toprim domain XM40_14895 PF10830 Protein of unknown function (DUF2553) XM40_14900 PF01597 Glycine cleavage H-protein XM40_14905 PF03960 ArsC family XM40_14910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XM40_14910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XM40_14910 PF02770 Acyl-CoA dehydrogenase, middle domain XM40_14915 PF02803 Thiolase, C-terminal domain XM40_14915 PF00108 Thiolase, N-terminal domain XM40_14920 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XM40_14920 PF00378 Enoyl-CoA hydratase/isomerase XM40_14920 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XM40_14925 PF01619 Proline dehydrogenase XM40_14935 PF07875 Coat F domain XM40_14940 PF01047 MarR family XM40_14945 PF07690 Major Facilitator Superfamily XM40_14950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_14950 PF03466 LysR substrate binding domain XM40_14955 PF06314 Acetoacetate decarboxylase (ADC) XM40_14965 PF10835 Protein of unknown function (DUF2573) XM40_14970 PF00005 ABC transporter XM40_14975 PF14039 YusW-like protein XM40_14985 PF00106 short chain dehydrogenase XM40_14990 PF00210 Ferritin-like domain XM40_14995 PF13180 PDZ domain XM40_15000 PF00072 Response regulator receiver domain XM40_15000 PF00486 Transcriptional regulatory protein, C terminal XM40_15005 PF00672 HAMP domain XM40_15005 PF00512 His Kinase A (phospho-acceptor) domain XM40_15005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_15010 PF00440 Bacterial regulatory proteins, tetR family XM40_15015 PF10415 Fumarase C C-terminus XM40_15015 PF00206 Lyase XM40_15020 PF13113 Protein of unknown function (DUF3970) XM40_15025 PF03323 Bacillus/Clostridium GerA spore germination protein XM40_15030 PF03845 Spore germination protein XM40_15035 PF05504 Spore germination B3/ GerAC like, C-terminal XM40_15040 PF00072 Response regulator receiver domain XM40_15040 PF00196 Bacterial regulatory proteins, luxR family XM40_15045 PF07730 Histidine kinase XM40_15045 PF00672 HAMP domain XM40_15045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_15050 PF09922 Cell wall-active antibiotics response 4TMS YvqF XM40_15055 PF13349 Putative adhesin XM40_15060 PF04012 PspA/IM30 family XM40_15070 PF07690 Major Facilitator Superfamily XM40_15075 PF01923 Cobalamin adenosyltransferase XM40_15080 PF00005 ABC transporter XM40_15085 PF01032 FecCD transport family XM40_15090 PF01497 Periplasmic binding protein XM40_15095 PF00106 short chain dehydrogenase XM40_15100 PF08450 SMP-30/Gluconolactonase/LRE-like region XM40_15105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_15105 PF00512 His Kinase A (phospho-acceptor) domain XM40_15110 PF00072 Response regulator receiver domain XM40_15110 PF00486 Transcriptional regulatory protein, C terminal XM40_15120 PF04545 Sigma-70, region 4 XM40_15125 PF00190 Cupin XM40_15130 PF14184 Regulatory protein YrvL XM40_15135 PF00005 ABC transporter XM40_15140 PF01032 FecCD transport family XM40_15145 PF01032 FecCD transport family XM40_15150 PF01497 Periplasmic binding protein XM40_15155 PF04072 Leucine carboxyl methyltransferase XM40_15160 PF13520 Amino acid permease XM40_15165 PF09575 Small spore protein J (Spore_SspJ) XM40_15170 PF04307 LexA-binding, inner membrane-associated putative hydrolase XM40_15175 PF00884 Sulfatase XM40_15180 PF12727 PBP superfamily domain XM40_15180 PF12728 Helix-turn-helix domain XM40_15190 PF00528 Binding-protein-dependent transport system inner membrane component XM40_15195 PF00196 Bacterial regulatory proteins, luxR family XM40_15195 PF00072 Response regulator receiver domain XM40_15200 PF00672 HAMP domain XM40_15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_15200 PF07730 Histidine kinase XM40_15200 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term XM40_15205 PF00005 ABC transporter XM40_15220 PF00248 Aldo/keto reductase family XM40_15230 PF00999 Sodium/hydrogen exchanger family XM40_15240 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XM40_15240 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XM40_15245 PF00667 FAD binding domain XM40_15245 PF00175 Oxidoreductase NAD-binding domain XM40_15245 PF00258 Flavodoxin XM40_15250 PF13538 UvrD-like helicase C-terminal domain XM40_15255 PF03458 UPF0126 domain XM40_15265 PF02600 Disulfide bond formation protein DsbB XM40_15270 PF13462 Thioredoxin XM40_15275 PF00403 Heavy-metal-associated domain XM40_15280 PF00403 Heavy-metal-associated domain XM40_15285 PF00403 Heavy-metal-associated domain XM40_15290 PF02583 Metal-sensitive transcriptional repressor XM40_15295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XM40_15295 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XM40_15300 PF02525 Flavodoxin-like fold XM40_15310 PF07690 Major Facilitator Superfamily XM40_15325 PF00296 Luciferase-like monooxygenase XM40_15330 PF00462 Glutaredoxin XM40_15335 PF00296 Luciferase-like monooxygenase XM40_15340 PF00005 ABC transporter XM40_15345 PF00528 Binding-protein-dependent transport system inner membrane component XM40_15350 PF00528 Binding-protein-dependent transport system inner membrane component XM40_15355 PF00497 Bacterial extracellular solute-binding proteins, family 3 XM40_15360 PF00497 Bacterial extracellular solute-binding proteins, family 3 XM40_15365 PF00583 Acetyltransferase (GNAT) family XM40_15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_15370 PF03466 LysR substrate binding domain XM40_15375 PF00106 short chain dehydrogenase XM40_15380 PF01337 Barstar (barnase inhibitor) XM40_15385 PF01668 SmpB protein XM40_15390 PF00773 RNB domain XM40_15390 PF00575 S1 RNA binding domain XM40_15390 PF08206 Ribonuclease B OB domain XM40_15390 PF17876 Cold shock domain XM40_15395 PF12146 Serine aminopeptidase, S33 XM40_15400 PF03840 Preprotein translocase SecG subunit XM40_15405 PF01381 Helix-turn-helix XM40_15420 PF01638 HxlR-like helix-turn-helix XM40_15425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_15425 PF00512 His Kinase A (phospho-acceptor) domain XM40_15430 PF00486 Transcriptional regulatory protein, C terminal XM40_15430 PF00072 Response regulator receiver domain XM40_15445 PF00005 ABC transporter XM40_15450 PF00528 Binding-protein-dependent transport system inner membrane component XM40_15455 PF04069 Substrate binding domain of ABC-type glycine betaine transport system XM40_15460 PF00528 Binding-protein-dependent transport system inner membrane component XM40_15465 PF00571 CBS domain XM40_15465 PF00005 ABC transporter XM40_15470 PF12802 MarR family XM40_15475 PF00528 Binding-protein-dependent transport system inner membrane component XM40_15480 PF04069 Substrate binding domain of ABC-type glycine betaine transport system XM40_15485 PF00528 Binding-protein-dependent transport system inner membrane component XM40_15490 PF00571 CBS domain XM40_15490 PF00005 ABC transporter XM40_15495 PF12802 MarR family XM40_15500 PF01914 MarC family integral membrane protein XM40_15510 PF13240 zinc-ribbon domain XM40_15515 PF00583 Acetyltransferase (GNAT) family XM40_15530 PF02585 GlcNAc-PI de-N-acetylase XM40_15545 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XM40_15550 PF01370 NAD dependent epimerase/dehydratase family XM40_15555 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XM40_15560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XM40_15560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XM40_15560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XM40_15565 PF04389 Peptidase family M28 XM40_15565 PF02225 PA domain XM40_15570 PF00113 Enolase, C-terminal TIM barrel domain XM40_15570 PF03952 Enolase, N-terminal domain XM40_15575 PF01676 Metalloenzyme superfamily XM40_15575 PF06415 BPG-independent PGAM N-terminus (iPGM_N) XM40_15580 PF00121 Triosephosphate isomerase XM40_15585 PF00162 Phosphoglycerate kinase XM40_15595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XM40_15595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XM40_15600 PF04198 Putative sugar-binding domain XM40_15605 PF00083 Sugar (and other) transporter XM40_15610 PF00392 Bacterial regulatory proteins, gntR family XM40_15615 PF00296 Luciferase-like monooxygenase XM40_15625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_15625 PF03466 LysR substrate binding domain XM40_15630 PF00892 EamA-like transporter family XM40_15635 PF00324 Amino acid permease XM40_15640 PF01380 SIS domain XM40_15640 PF01418 Helix-turn-helix domain, rpiR family XM40_15645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XM40_15645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XM40_15650 PF02447 GntP family permease XM40_15655 PF02589 LUD domain XM40_15660 PF11870 Domain of unknown function (DUF3390) XM40_15660 PF13183 4Fe-4S dicluster domain XM40_15660 PF02589 LUD domain XM40_15665 PF02754 Cysteine-rich domain XM40_15670 PF00155 Aminotransferase class I and II XM40_15675 PF07729 FCD domain XM40_15675 PF00392 Bacterial regulatory proteins, gntR family XM40_15680 PF02652 L-lactate permease XM40_15685 PF04552 Sigma-54, DNA binding domain XM40_15685 PF04963 Sigma-54 factor, core binding domain XM40_15685 PF00309 Sigma-54 factor, Activator interacting domain (AID) XM40_15690 PF09628 YvfG protein XM40_15695 PF04230 Polysaccharide pyruvyl transferase XM40_15700 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XM40_15705 PF00132 Bacterial transferase hexapeptide (six repeats) XM40_15705 PF17836 PglD N-terminal domain XM40_15710 PF02397 Bacterial sugar transferase XM40_15715 PF14667 Polysaccharide biosynthesis C-terminal domain XM40_15715 PF01943 Polysaccharide biosynthesis protein XM40_15720 PF00535 Glycosyl transferase family 2 XM40_15725 PF04230 Polysaccharide pyruvyl transferase XM40_15730 PF00535 Glycosyl transferase family 2 XM40_15740 PF13439 Glycosyltransferase Family 4 XM40_15740 PF00534 Glycosyl transferases group 1 XM40_15745 PF00535 Glycosyl transferase family 2 XM40_15750 PF13439 Glycosyltransferase Family 4 XM40_15750 PF00534 Glycosyl transferases group 1 XM40_15755 PF02719 Polysaccharide biosynthesis protein XM40_15760 PF13614 AAA domain XM40_15765 PF02706 Chain length determinant protein XM40_15770 PF08671 Anti-repressor SinI XM40_15770 PF01381 Helix-turn-helix XM40_15775 PF00135 Carboxylesterase family XM40_15780 PF01872 RibD C-terminal domain XM40_15790 PF00583 Acetyltransferase (GNAT) family XM40_15795 PF05870 Phenolic acid decarboxylase (PAD) XM40_15840 PF00251 Glycosyl hydrolases family 32 N-terminal domain XM40_15840 PF08244 Glycosyl hydrolases family 32 C terminal XM40_15845 PF01306 LacY proton/sugar symporter XM40_15850 PF00356 Bacterial regulatory proteins, lacI family XM40_15855 PF00574 Clp protease XM40_15860 PF03466 LysR substrate binding domain XM40_15860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_15865 PF04303 PrpF protein XM40_15870 PF00083 Sugar (and other) transporter XM40_15875 PF03641 Possible lysine decarboxylase XM40_15880 PF03819 MazG nucleotide pyrophosphohydrolase domain XM40_15885 PF00916 Sulfate permease family XM40_15885 PF01740 STAS domain XM40_15890 PF00484 Carbonic anhydrase XM40_15900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XM40_15900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XM40_15905 PF00545 ribonuclease XM40_15910 PF00797 N-acetyltransferase XM40_15915 PF00381 PTS HPr component phosphorylation site XM40_15920 PF10298 WhiA N-terminal LAGLIDADG-like domain XM40_15920 PF14527 WhiA LAGLIDADG-like domain XM40_15920 PF02650 WhiA C-terminal HTH domain XM40_15925 PF01933 Uncharacterised protein family UPF0052 XM40_15930 PF03668 P-loop ATPase protein family XM40_15935 PF00293 NUDIX domain XM40_15940 PF07992 Pyridine nucleotide-disulphide oxidoreductase XM40_15945 PF00877 NlpC/P60 family XM40_15955 PF00672 HAMP domain XM40_15955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_15955 PF18698 Histidine kinase sensor domain XM40_15955 PF00512 His Kinase A (phospho-acceptor) domain XM40_15955 PF00989 PAS fold XM40_15960 PF00072 Response regulator receiver domain XM40_15960 PF00486 Transcriptional regulatory protein, C terminal XM40_15970 PF00664 ABC transporter transmembrane region XM40_15970 PF00005 ABC transporter XM40_15975 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XM40_15975 PF01502 Phosphoribosyl-AMP cyclohydrolase XM40_15980 PF00977 Histidine biosynthesis protein XM40_15985 PF00977 Histidine biosynthesis protein XM40_15990 PF00117 Glutamine amidotransferase class-I XM40_15995 PF00475 Imidazoleglycerol-phosphate dehydratase XM40_16000 PF00815 Histidinol dehydrogenase XM40_16005 PF01634 ATP phosphoribosyltransferase XM40_16010 PF13393 Histidyl-tRNA synthetase XM40_16015 PF13529 Peptidase_C39 like family XM40_16020 PF14602 Hexapeptide repeat of succinyl-transferase XM40_16025 PF13419 Haloacid dehalogenase-like hydrolase XM40_16030 PF01790 Prolipoprotein diacylglyceryl transferase XM40_16035 PF07475 HPr Serine kinase C-terminal domain XM40_16035 PF02603 HPr Serine kinase N terminus XM40_16040 PF01979 Amidohydrolase family XM40_16045 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XM40_16055 PF00440 Bacterial regulatory proteins, tetR family XM40_16060 PF00149 Calcineurin-like phosphoesterase XM40_16065 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV XM40_16070 PF04024 PspC domain XM40_16075 PF13349 Putative adhesin XM40_16090 PF17760 UvrA interaction domain XM40_16090 PF17755 UvrA DNA-binding domain XM40_16090 PF00005 ABC transporter XM40_16095 PF00271 Helicase conserved C-terminal domain XM40_16095 PF04851 Type III restriction enzyme, res subunit XM40_16095 PF02151 UvrB/uvrC motif XM40_16095 PF12344 Ultra-violet resistance protein B XM40_16095 PF17757 UvrB interaction domain XM40_16100 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) XM40_16105 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XM40_16105 PF00391 PEP-utilising enzyme, mobile domain XM40_16110 PF00440 Bacterial regulatory proteins, tetR family XM40_16115 PF07690 Major Facilitator Superfamily XM40_16130 PF00975 Thioesterase domain XM40_16140 PF17820 PDZ domain XM40_16145 PF17423 Swarming motility protein XM40_16150 PF01471 Putative peptidoglycan binding domain XM40_16150 PF03572 Peptidase family S41 XM40_16150 PF17820 PDZ domain XM40_16155 PF13229 Right handed beta helix region XM40_16160 PF18075 FtsX extracellular domain XM40_16160 PF02687 FtsX-like permease family XM40_16165 PF00005 ABC transporter XM40_16170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III XM40_16175 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XM40_16175 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XM40_16180 PF03462 PCRF domain XM40_16180 PF00472 RF-1 domain XM40_16185 PF07516 SecA Wing and Scaffold domain XM40_16185 PF01043 SecA preprotein cross-linking domain XM40_16185 PF07517 SecA DEAD-like domain XM40_16185 PF02810 SEC-C motif XM40_16190 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus XM40_16190 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XM40_16205 PF02561 Flagellar protein FliS XM40_16210 PF07196 Flagellin hook IN motif XM40_16210 PF02465 Flagellar hook-associated protein 2 N-terminus XM40_16210 PF07195 Flagellar hook-associated protein 2 C-terminus XM40_16215 PF00700 Bacterial flagellin C-terminal helical region XM40_16215 PF00669 Bacterial flagellin N-terminal helical region XM40_16220 PF02599 Global regulator protein family XM40_16225 PF02623 FliW protein XM40_16235 PF00700 Bacterial flagellin C-terminal helical region XM40_16235 PF00669 Bacterial flagellin N-terminal helical region XM40_16240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XM40_16240 PF00460 Flagella basal body rod protein XM40_16245 PF05130 FlgN protein XM40_16250 PF04316 Anti-sigma-28 factor, FlgM XM40_16265 PF10719 Late competence development protein ComFB XM40_16270 PF04851 Type III restriction enzyme, res subunit XM40_16270 PF00271 Helicase conserved C-terminal domain XM40_16275 PF02645 Uncharacterised protein, DegV family COG1307 XM40_16280 PF00072 Response regulator receiver domain XM40_16280 PF00196 Bacterial regulatory proteins, luxR family XM40_16285 PF05384 Sensor protein DegS XM40_16285 PF07730 Histidine kinase XM40_16285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_16290 PF01205 Uncharacterized protein family UPF0029 XM40_16290 PF09186 Domain of unknown function (DUF1949) XM40_16295 PF03816 Cell envelope-related transcriptional attenuator domain XM40_16300 PF00953 Glycosyl transferase family 4 XM40_16310 PF00535 Glycosyl transferase family 2 XM40_16315 PF02706 Chain length determinant protein XM40_16320 PF04932 O-Antigen ligase XM40_16325 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XM40_16325 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XM40_16325 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XM40_16330 PF13439 Glycosyltransferase Family 4 XM40_16330 PF00534 Glycosyl transferases group 1 XM40_16335 PF14667 Polysaccharide biosynthesis C-terminal domain XM40_16335 PF01943 Polysaccharide biosynthesis protein XM40_16340 PF02397 Bacterial sugar transferase XM40_16345 PF04122 Putative cell wall binding repeat 2 XM40_16345 PF01520 N-acetylmuramoyl-L-alanine amidase XM40_16350 PF08486 Stage II sporulation protein XM40_16350 PF04122 Putative cell wall binding repeat 2 XM40_16360 PF03816 Cell envelope-related transcriptional attenuator domain XM40_16365 PF02350 UDP-N-acetylglucosamine 2-epimerase XM40_16370 PF00483 Nucleotidyl transferase XM40_16375 PF00005 ABC transporter XM40_16380 PF01061 ABC-2 type transporter XM40_16385 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase XM40_16390 PF00535 Glycosyl transferase family 2 XM40_16390 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 XM40_16395 PF01467 Cytidylyltransferase-like XM40_16400 PF03808 Glycosyl transferase WecB/TagA/CpsF family XM40_16405 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase XM40_16410 PF08239 Bacterial SH3 domain XM40_16410 PF05036 Sporulation related domain XM40_16410 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XM40_16415 PF01238 Phosphomannose isomerase type I XM40_16420 PF03323 Bacillus/Clostridium GerA spore germination protein XM40_16425 PF03845 Spore germination protein XM40_16430 PF05504 Spore germination B3/ GerAC like, C-terminal XM40_16440 PF00083 Sugar (and other) transporter XM40_16445 PF03816 Cell envelope-related transcriptional attenuator domain XM40_16455 PF04791 LMBR1-like membrane protein XM40_16460 PF00877 NlpC/P60 family XM40_16465 PF09587 Bacterial capsule synthesis protein PGA_cap XM40_16470 PF14102 Capsule biosynthesis CapC XM40_16475 PF08245 Mur ligase middle domain XM40_16480 PF03323 Bacillus/Clostridium GerA spore germination protein XM40_16485 PF03845 Spore germination protein XM40_16495 PF00356 Bacterial regulatory proteins, lacI family XM40_16500 PF00294 pfkB family carbohydrate kinase XM40_16505 PF05025 RbsD / FucU transport protein family XM40_16510 PF00005 ABC transporter XM40_16515 PF02653 Branched-chain amino acid transport system / permease component XM40_16520 PF13407 Periplasmic binding protein domain XM40_16525 PF08239 Bacterial SH3 domain XM40_16530 PF02525 Flavodoxin-like fold XM40_16535 PF03306 Alpha-acetolactate decarboxylase XM40_16540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XM40_16540 PF00205 Thiamine pyrophosphate enzyme, central domain XM40_16540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XM40_16545 PF03466 LysR substrate binding domain XM40_16545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_16550 PF02040 Arsenical pump membrane protein XM40_16565 PF08757 CotH kinase protein XM40_16575 PF01613 Flavin reductase like domain XM40_16590 PF01037 Lrp/AsnC ligand binding domain XM40_16590 PF13404 AsnC-type helix-turn-helix domain XM40_16595 PF02417 Chromate transporter XM40_16600 PF02417 Chromate transporter XM40_16610 PF03358 NADPH-dependent FMN reductase XM40_16615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_16615 PF03466 LysR substrate binding domain XM40_16620 PF04493 Endonuclease V XM40_16635 PF14431 YwqJ-like deaminase XM40_16635 PF14449 Pre-toxin TG XM40_16635 PF04740 LXG domain of WXG superfamily XM40_16645 PF16888 Domain of unknown function (DUF5082) XM40_16650 PF09234 Domain of unknown function (DUF1963) XM40_16655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XM40_16655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XM40_16655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XM40_16665 PF13614 AAA domain XM40_16670 PF13807 G-rich domain on putative tyrosine kinase XM40_16670 PF02706 Chain length determinant protein XM40_16675 PF04434 SWIM zinc finger XM40_16680 PF12419 SNF2 Helicase protein XM40_16680 PF00271 Helicase conserved C-terminal domain XM40_16680 PF00176 SNF2 family N-terminal domain XM40_16690 PF00455 DeoR C terminal sensor domain XM40_16690 PF08220 DeoR-like helix-turn-helix domain XM40_16695 PF00436 Single-strand binding protein family XM40_16705 PF14183 YwpF-like protein XM40_16710 PF01741 Large-conductance mechanosensitive channel, MscL XM40_16715 PF07977 FabA-like domain XM40_16720 PF18801 response regulator aspartate phosphatase H, N terminal XM40_16725 PF00460 Flagella basal body rod protein XM40_16725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XM40_16730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XM40_16730 PF00460 Flagella basal body rod protein XM40_16740 PF12116 Stage III sporulation protein D XM40_16745 PF01047 MarR family XM40_16750 PF07690 Major Facilitator Superfamily XM40_16755 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin XM40_16760 PF07690 Major Facilitator Superfamily XM40_16765 PF00857 Isochorismatase family XM40_16770 PF00909 Ammonium Transporter Family XM40_16775 PF00543 Nitrogen regulatory protein P-II XM40_16780 PF01098 Cell cycle protein XM40_16785 PF01569 PAP2 superfamily XM40_16790 PF04892 VanZ like family XM40_16795 PF01551 Peptidase family M23 XM40_16800 PF00583 Acetyltransferase (GNAT) family XM40_16805 PF17319 Family of unknown function (DUF5362) XM40_16810 PF17370 Family of unknown function (DUF5392) XM40_16815 PF13396 Phospholipase_D-nuclease N-terminal XM40_16815 PF13091 PLD-like domain XM40_16820 PF17319 Family of unknown function (DUF5362) XM40_16825 PF00457 Glycosyl hydrolases family 11 XM40_16835 PF02082 Transcriptional regulator XM40_16840 PF01979 Amidohydrolase family XM40_16840 PF00449 Urease alpha-subunit, N-terminal domain XM40_16845 PF00699 Urease beta subunit XM40_16850 PF00547 Urease, gamma subunit XM40_16855 PF05532 CsbD-like XM40_16865 PF17874 MalT-like TPR region XM40_16865 PF18801 response regulator aspartate phosphatase H, N terminal XM40_16870 PF06463 Molybdenum Cofactor Synthesis C XM40_16870 PF04055 Radical SAM superfamily XM40_16875 PF02634 FdhD/NarQ family XM40_16880 PF00092 von Willebrand factor type A domain XM40_16885 PF00092 von Willebrand factor type A domain XM40_16890 PF08486 Stage II sporulation protein XM40_16895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XM40_16900 PF08680 TATA-box binding XM40_16905 PF06612 Protein of unknown function (DUF1146) XM40_16915 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XM40_16915 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XM40_16920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XM40_16920 PF02874 ATP synthase alpha/beta family, beta-barrel domain XM40_16925 PF00231 ATP synthase XM40_16930 PF00306 ATP synthase alpha/beta chain, C terminal domain XM40_16930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XM40_16930 PF02874 ATP synthase alpha/beta family, beta-barrel domain XM40_16935 PF00213 ATP synthase delta (OSCP) subunit XM40_16940 PF00430 ATP synthase B/B' CF(0) XM40_16945 PF00137 ATP synthase subunit C XM40_16950 PF00119 ATP synthase A chain XM40_16955 PF03899 ATP synthase I chain XM40_16965 PF00464 Serine hydroxymethyltransferase XM40_16970 PF04260 Protein of unknown function (DUF436) XM40_16975 PF02502 Ribose/Galactose Isomerase XM40_16980 PF01451 Low molecular weight phosphotyrosine protein phosphatase XM40_16985 PF02659 Putative manganese efflux pump XM40_16990 PF01300 Telomere recombination XM40_16990 PF03481 Putative GTP-binding controlling metal-binding XM40_17000 PF09551 Stage II sporulation protein R (spore_II_R) XM40_17005 PF17094 Uncharacterised protein family (UPF0715) XM40_17010 PF17247 Family of unknown function (DUF5316) XM40_17015 PF17827 PrmC N-terminal domain XM40_17015 PF05175 Methyltransferase small domain XM40_17020 PF03462 PCRF domain XM40_17020 PF00472 RF-1 domain XM40_17025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XM40_17030 PF13411 MerR HTH family regulatory protein XM40_17035 PF03547 Membrane transport protein XM40_17040 PF03949 Malic enzyme, NAD binding domain XM40_17040 PF00390 Malic enzyme, N-terminal domain XM40_17045 PF00265 Thymidine kinase XM40_17050 PF01197 Ribosomal protein L31 XM40_17055 PF07497 Rho termination factor, RNA-binding domain XM40_17055 PF07498 Rho termination factor, N-terminal domain XM40_17055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XM40_17060 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded XM40_17065 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XM40_17070 PF00923 Transaldolase/Fructose-6-phosphate aldolase XM40_17075 PF01116 Fructose-bisphosphate aldolase class-II XM40_17080 PF00072 Response regulator receiver domain XM40_17085 PF10740 Domain of unknown function (DUF2529) XM40_17090 PF00117 Glutamine amidotransferase class-I XM40_17090 PF06418 CTP synthase N-terminus XM40_17095 PF05066 HB1, ASXL, restriction endonuclease HTH domain XM40_17100 PF02754 Cysteine-rich domain XM40_17100 PF13183 4Fe-4S dicluster domain XM40_17105 PF13091 PLD-like domain XM40_17110 PF03851 UV-endonuclease UvdE XM40_17120 PF00664 ABC transporter transmembrane region XM40_17120 PF00005 ABC transporter XM40_17125 PF13396 Phospholipase_D-nuclease N-terminal XM40_17125 PF13091 PLD-like domain XM40_17135 PF02665 Nitrate reductase gamma subunit XM40_17140 PF02613 Nitrate reductase delta subunit XM40_17145 PF13247 4Fe-4S dicluster domain XM40_17145 PF14711 Respiratory nitrate reductase beta C-terminal XM40_17150 PF14710 Respiratory nitrate reductase alpha N-terminal XM40_17150 PF01568 Molydopterin dinucleotide binding domain XM40_17150 PF00384 Molybdopterin oxidoreductase XM40_17160 PF14256 YwiC-like protein XM40_17165 PF00325 Bacterial regulatory proteins, crp family XM40_17165 PF00027 Cyclic nucleotide-binding domain XM40_17170 PF07690 Major Facilitator Superfamily XM40_17175 PF03485 Arginyl tRNA synthetase N terminal domain XM40_17175 PF05746 DALR anticodon binding domain XM40_17175 PF00750 tRNA synthetases class I (R) XM40_17180 PF09148 Domain of unknown function (DUF1934) XM40_17185 PF18801 response regulator aspartate phosphatase H, N terminal XM40_17220 PF00491 Arginase family XM40_17225 PF17284 Spermidine synthase tetramerisation domain XM40_17230 PF00905 Penicillin binding protein transpeptidase domain XM40_17230 PF00912 Transglycosylase XM40_17240 PF08741 YwhD family XM40_17245 PF02163 Peptidase family M50 XM40_17250 PF01361 Tautomerase enzyme XM40_17255 PF01047 MarR family XM40_17265 PF13520 Amino acid permease XM40_17275 PF01966 HD domain XM40_17280 PF07293 Protein of unknown function (DUF1450) XM40_17290 PF03551 Transcriptional regulator PadR-like family XM40_17300 PF03099 Biotin/lipoate A/B protein ligase family XM40_17305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_17305 PF03466 LysR substrate binding domain XM40_17310 PF03601 Conserved hypothetical protein 698 XM40_17315 PF01515 Phosphate acetyl/butaryl transferase XM40_17330 PF00155 Aminotransferase class I and II XM40_17335 PF07690 Major Facilitator Superfamily XM40_17350 PF07883 Cupin domain XM40_17360 PF07690 Major Facilitator Superfamily XM40_17365 PF07690 Major Facilitator Superfamily XM40_17370 PF00324 Amino acid permease XM40_17375 PF01546 Peptidase family M20/M25/M40 XM40_17380 PF00171 Aldehyde dehydrogenase family XM40_17385 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain XM40_17385 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XM40_17390 PF17735 Biofilm surface layer A XM40_17395 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XM40_17400 PF04321 RmlD substrate binding domain XM40_17405 PF16363 GDP-mannose 4,6 dehydratase XM40_17410 PF00483 Nucleotidyl transferase XM40_17415 PF04101 Glycosyltransferase family 28 C-terminal domain XM40_17420 PF02348 Cytidylyltransferase XM40_17425 PF03102 NeuB family XM40_17425 PF08666 SAF domain XM40_17430 PF00583 Acetyltransferase (GNAT) family XM40_17435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XM40_17440 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase XM40_17445 PF00535 Glycosyl transferase family 2 XM40_17450 PF09671 Spore coat protein (Spore_GerQ) XM40_17455 PF04241 Protein of unknown function (DUF423) XM40_17460 PF00860 Permease family XM40_17465 PF17261 Family of unknown function (DUF5327) XM40_17470 PF03167 Uracil DNA glycosylase superfamily XM40_17475 PF00535 Glycosyl transferase family 2 XM40_17490 PF03551 Transcriptional regulator PadR-like family XM40_17495 PF08543 Phosphomethylpyrimidine kinase XM40_17505 PF00251 Glycosyl hydrolases family 32 N-terminal domain XM40_17505 PF08244 Glycosyl hydrolases family 32 C terminal XM40_17510 PF00367 phosphotransferase system, EIIB XM40_17510 PF02378 Phosphotransferase system, EIIC XM40_17515 PF00874 PRD domain XM40_17515 PF03123 CAT RNA binding domain XM40_17525 PF00082 Subtilase family XM40_17525 PF02225 PA domain XM40_17525 PF05922 Peptidase inhibitor I9 XM40_17525 PF13860 FlgD Ig-like domain XM40_17530 PF00296 Luciferase-like monooxygenase XM40_17535 PF00881 Nitroreductase family XM40_17540 PF00005 ABC transporter XM40_17560 PF01098 Cell cycle protein XM40_17565 PF00583 Acetyltransferase (GNAT) family XM40_17570 PF17368 Spore morphogenesis and germination YwcE XM40_17575 PF03626 Prokaryotic Cytochrome C oxidase subunit IV XM40_17580 PF00510 Cytochrome c oxidase subunit III XM40_17585 PF00115 Cytochrome C and Quinol oxidase polypeptide I XM40_17590 PF02790 Cytochrome C oxidase subunit II, transmembrane domain XM40_17590 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XM40_17595 PF04226 Transglycosylase associated protein XM40_17600 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain XM40_17600 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain XM40_17605 PF04138 GtrA-like protein XM40_17610 PF00440 Bacterial regulatory proteins, tetR family XM40_17615 PF08671 Anti-repressor SinI XM40_17630 PF01323 DSBA-like thioredoxin domain XM40_17635 PF04261 Dyp-type peroxidase family XM40_17635 PF10518 TAT (twin-arginine translocation) pathway signal sequence XM40_17640 PF09375 Imelysin XM40_17645 PF02581 Thiamine monophosphate synthase XM40_17650 PF02110 Hydroxyethylthiazole kinase family XM40_17655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_17655 PF03466 LysR substrate binding domain XM40_17660 PF03788 LrgA family XM40_17665 PF04172 LrgB-like family XM40_17670 PF09962 Uncharacterized conserved protein (DUF2196) XM40_17675 PF13411 MerR HTH family regulatory protein XM40_17675 PF07739 TipAS antibiotic-recognition domain XM40_17680 PF10672 S-adenosylmethionine-dependent methyltransferase XM40_17680 PF17785 PUA-like domain XM40_17685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XM40_17690 PF02378 Phosphotransferase system, EIIC XM40_17695 PF00082 Subtilase family XM40_17700 PF01501 Glycosyl transferase family 8 XM40_17705 PF04607 Region found in RelA / SpoT proteins XM40_17710 PF01040 UbiA prenyltransferase family XM40_17715 PF12459 D-Ala-teichoic acid biosynthesis protein XM40_17720 PF13193 AMP-binding enzyme C-terminal domain XM40_17720 PF00501 AMP-binding enzyme XM40_17725 PF03062 MBOAT, membrane-bound O-acyltransferase family XM40_17730 PF00550 Phosphopantetheine attachment site XM40_17735 PF04914 DltD protein XM40_17740 PF01063 Amino-transferase class IV XM40_17745 PF11975 Family 4 glycosyl hydrolase C-terminal domain XM40_17745 PF02056 Family 4 glycosyl hydrolase XM40_17750 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit XM40_17755 PF02378 Phosphotransferase system, EIIC XM40_17760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XM40_17765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XM40_17765 PF00874 PRD domain XM40_17765 PF08279 HTH domain XM40_17765 PF05043 Mga helix-turn-helix domain XM40_17770 PF02245 Methylpurine-DNA glycosylase (MPG) XM40_17775 PF01032 FecCD transport family XM40_17780 PF01032 FecCD transport family XM40_17790 PF01022 Bacterial regulatory protein, arsR family XM40_17795 PF02040 Arsenical pump membrane protein XM40_17800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XM40_17805 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit XM40_17810 PF02378 Phosphotransferase system, EIIC XM40_17815 PF00232 Glycosyl hydrolase family 1 XM40_17820 PF00480 ROK family XM40_17825 PF01238 Phosphomannose isomerase type I XM40_17830 PF02156 Glycosyl hydrolase family 26 XM40_17835 PF06628 Catalase-related immune-responsive XM40_17835 PF00199 Catalase XM40_17840 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family XM40_17845 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin XM40_17850 PF01256 Carbohydrate kinase XM40_17855 PF00664 ABC transporter transmembrane region XM40_17855 PF00005 ABC transporter XM40_17860 PF00664 ABC transporter transmembrane region XM40_17860 PF00005 ABC transporter XM40_17865 PF02322 Cytochrome bd terminal oxidase subunit II XM40_17870 PF01654 Cytochrome bd terminal oxidase subunit I XM40_17875 PF03390 2-hydroxycarboxylate transporter family XM40_17880 PF01522 Polysaccharide deacetylase XM40_17885 PF00005 ABC transporter XM40_17885 PF17912 MalK OB fold domain XM40_17885 PF03459 TOBE domain XM40_17890 PF13556 PucR C-terminal helix-turn-helix domain XM40_17895 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XM40_17895 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XM40_17900 PF11611 Domain of unknown function (DUF4352) XM40_17905 PF16363 GDP-mannose 4,6 dehydratase XM40_17910 PF01546 Peptidase family M20/M25/M40 XM40_17910 PF07687 Peptidase dimerisation domain XM40_17915 PF04525 LURP-one-related XM40_17920 PF01717 Cobalamin-independent synthase, Catalytic domain XM40_17925 PF08241 Methyltransferase domain XM40_17930 PF01773 Na+ dependent nucleoside transporter N-terminus XM40_17930 PF07662 Na+ dependent nucleoside transporter C-terminus XM40_17950 PF00199 Catalase XM40_17950 PF06628 Catalase-related immune-responsive XM40_17950 PF18011 C-terminal domain found in long catalases XM40_17955 PF03600 Citrate transporter XM40_17960 PF00722 Glycosyl hydrolases family 16 XM40_17970 PF11700 Vacuole effluxer Atg22 like XM40_17975 PF00271 Helicase conserved C-terminal domain XM40_17975 PF00270 DEAD/DEAH box helicase XM40_17975 PF03880 DbpA RNA binding domain XM40_17990 PF14176 YxiJ-like protein XM40_18035 PF05593 RHS Repeat XM40_18040 PF00544 Pectate lyase XM40_18045 PF00892 EamA-like transporter family XM40_18050 PF00582 Universal stress protein family XM40_18055 PF00232 Glycosyl hydrolase family 1 XM40_18060 PF00367 phosphotransferase system, EIIB XM40_18060 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XM40_18060 PF02378 Phosphotransferase system, EIIC XM40_18075 PF04616 Glycosyl hydrolases family 43 XM40_18075 PF16369 C-terminal lipocalin-like domain XM40_18080 PF09021 HutP XM40_18085 PF00221 Aromatic amino acid lyase XM40_18090 PF17392 Urocanase C-terminal domain XM40_18090 PF01175 Urocanase Rossmann-like domain XM40_18090 PF17391 Urocanase N-terminal domain XM40_18095 PF01979 Amidohydrolase family XM40_18100 PF00491 Arginase family XM40_18105 PF00324 Amino acid permease XM40_18110 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain XM40_18110 PF00591 Glycosyl transferase family, a/b domain XM40_18110 PF02885 Glycosyl transferase family, helical bundle domain XM40_18115 PF07662 Na+ dependent nucleoside transporter C-terminus XM40_18115 PF01773 Na+ dependent nucleoside transporter N-terminus XM40_18120 PF01791 DeoC/LacD family aldolase XM40_18125 PF04198 Putative sugar-binding domain XM40_18140 PF11631 Protein of unknown function (DUF3255) XM40_18160 PF01497 Periplasmic binding protein XM40_18165 PF06486 Protein of unknown function (DUF1093) XM40_18170 PF02687 FtsX-like permease family XM40_18175 PF00005 ABC transporter XM40_18180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_18185 PF00072 Response regulator receiver domain XM40_18185 PF00486 Transcriptional regulatory protein, C terminal XM40_18190 PF01116 Fructose-bisphosphate aldolase class-II XM40_18195 PF01261 Xylose isomerase-like TIM barrel XM40_18200 PF01261 Xylose isomerase-like TIM barrel XM40_18205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XM40_18205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XM40_18210 PF07690 Major Facilitator Superfamily XM40_18215 PF01261 Xylose isomerase-like TIM barrel XM40_18220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XM40_18220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XM40_18220 PF00205 Thiamine pyrophosphate enzyme, central domain XM40_18225 PF00294 pfkB family carbohydrate kinase XM40_18230 PF04962 KduI/IolB family XM40_18235 PF00171 Aldehyde dehydrogenase family XM40_18240 PF00455 DeoR C terminal sensor domain XM40_18240 PF08220 DeoR-like helix-turn-helix domain XM40_18245 PF00248 Aldo/keto reductase family XM40_18250 PF00083 Sugar (and other) transporter XM40_18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_18255 PF00183 Hsp90 protein XM40_18270 PF00072 Response regulator receiver domain XM40_18270 PF00196 Bacterial regulatory proteins, luxR family XM40_18275 PF07730 Histidine kinase XM40_18280 PF00487 Fatty acid desaturase XM40_18290 PF00440 Bacterial regulatory proteins, tetR family XM40_18295 PF00171 Aldehyde dehydrogenase family XM40_18300 PF01011 PQQ enzyme repeat XM40_18300 PF13570 PQQ-like domain XM40_18300 PF13360 PQQ-like domain XM40_18305 PF17369 Family of unknown function (DUF5391) XM40_18315 PF07690 Major Facilitator Superfamily XM40_18320 PF06271 RDD family XM40_18330 PF00578 AhpC/TSA family XM40_18335 PF07992 Pyridine nucleotide-disulphide oxidoreductase XM40_18335 PF13192 Thioredoxin domain XM40_18340 PF00324 Amino acid permease XM40_18345 PF06874 Firmicute fructose-1,6-bisphosphatase XM40_18350 PF01799 [2Fe-2S] binding domain XM40_18350 PF00111 2Fe-2S iron-sulfur cluster binding domain XM40_18365 PF12804 MobA-like NTP transferase domain XM40_18370 PF13478 XdhC Rossmann domain XM40_18370 PF02625 XdhC and CoxI family XM40_18390 PF13614 AAA domain XM40_18395 PF02590 Predicted SPOUT methyltransferase XM40_18415 PF00248 Aldo/keto reductase family XM40_18420 PF00583 Acetyltransferase (GNAT) family XM40_18425 PF18801 response regulator aspartate phosphatase H, N terminal XM40_18430 PF00491 Arginase family XM40_18435 PF00324 Amino acid permease XM40_18440 PF00202 Aminotransferase class-III XM40_18445 PF13630 SdpI/YhfL protein family XM40_18445 PF07853 Protein of unknown function (DUF1648) XM40_18450 PF01022 Bacterial regulatory protein, arsR family XM40_18455 PF13426 PAS domain XM40_18455 PF02954 Bacterial regulatory protein, Fis family XM40_18455 PF00158 Sigma-54 interaction domain XM40_18465 PF00005 ABC transporter XM40_18465 PF16326 ABC transporter C-terminal domain XM40_18465 PF12848 ABC transporter XM40_18480 PF00899 ThiF family XM40_18485 PF00989 PAS fold XM40_18485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_18485 PF00512 His Kinase A (phospho-acceptor) domain XM40_18485 PF16736 Single Cache-like XM40_18495 PF13180 PDZ domain XM40_18500 PF00753 Metallo-beta-lactamase superfamily XM40_18505 PF09648 YycH protein XM40_18510 PF07435 YycH protein XM40_18515 PF00512 His Kinase A (phospho-acceptor) domain XM40_18515 PF13426 PAS domain XM40_18515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_18515 PF00672 HAMP domain XM40_18520 PF00072 Response regulator receiver domain XM40_18520 PF00486 Transcriptional regulatory protein, C terminal XM40_18550 PF00709 Adenylosuccinate synthetase XM40_18555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XM40_18560 PF03796 DnaB-like helicase C terminal domain XM40_18560 PF00772 DnaB-like helicase N terminal domain XM40_18565 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) XM40_18580 PF13439 Glycosyltransferase Family 4 XM40_18580 PF00534 Glycosyl transferases group 1 XM40_18590 PF02222 ATP-grasp domain XM40_18595 PF00534 Glycosyl transferases group 1 XM40_18595 PF13439 Glycosyltransferase Family 4 XM40_18605 PF00069 Protein kinase domain XM40_18605 PF03793 PASTA domain XM40_18610 PF01281 Ribosomal protein L9, N-terminal domain XM40_18610 PF03948 Ribosomal protein L9, C-terminal domain XM40_18615 PF01368 DHH family XM40_18615 PF02272 DHHA1 domain XM40_18620 PF09991 Predicted membrane protein (DUF2232) XM40_18630 PF07875 Coat F domain XM40_18635 PF01638 HxlR-like helix-turn-helix XM40_18640 PF01368 DHH family XM40_18640 PF02833 DHHA2 domain XM40_18645 PF00892 EamA-like transporter family XM40_18650 PF02435 Levansucrase/Invertase XM40_18655 PF08244 Glycosyl hydrolases family 32 C terminal XM40_18655 PF00251 Glycosyl hydrolases family 32 N-terminal domain XM40_18660 PF07729 FCD domain XM40_18660 PF00392 Bacterial regulatory proteins, gntR family XM40_18665 PF05163 DinB family XM40_18670 PF07690 Major Facilitator Superfamily XM40_18680 PF00881 Nitroreductase family XM40_18685 PF01047 MarR family XM40_18690 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) XM40_18690 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 XM40_18695 PF01047 MarR family XM40_18710 PF02627 Carboxymuconolactone decarboxylase family XM40_18715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XM40_18715 PF03466 LysR substrate binding domain XM40_18725 PF00392 Bacterial regulatory proteins, gntR family XM40_18725 PF00155 Aminotransferase class I and II XM40_18730 PF00892 EamA-like transporter family XM40_18745 PF01381 Helix-turn-helix XM40_18745 PF00145 C-5 cytosine-specific DNA methylase XM40_18750 PF03190 Protein of unknown function, DUF255 XM40_18755 PF02517 CPBP intramembrane metalloprotease XM40_18760 PF00083 Sugar (and other) transporter XM40_18765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XM40_18770 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family XM40_18770 PF00356 Bacterial regulatory proteins, lacI family XM40_18775 PF03372 Endonuclease/Exonuclease/phosphatase family XM40_18780 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XM40_18780 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XM40_18785 PF12833 Helix-turn-helix domain XM40_18785 PF02805 Metal binding domain of Ada XM40_18790 PF01084 Ribosomal protein S18 XM40_18795 PF00436 Single-strand binding protein family XM40_18800 PF01250 Ribosomal protein S6 XM40_18805 PF06071 Protein of unknown function (DUF933) XM40_18805 PF01926 50S ribosome-binding GTPase XM40_18810 PF00384 Molybdopterin oxidoreductase XM40_18810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XM40_18810 PF01568 Molydopterin dinucleotide binding domain XM40_18815 PF06107 Bacterial protein of unknown function (DUF951) XM40_18830 PF06866 Protein of unknown function (DUF1256) XM40_18835 PF02195 ParB-like nuclease domain XM40_18835 PF17762 HTH domain found in ParB protein XM40_18840 PF13614 AAA domain XM40_18845 PF17762 HTH domain found in ParB protein XM40_18845 PF02195 ParB-like nuclease domain XM40_18850 PF02527 rRNA small subunit methyltransferase G XM40_18855 PF13932 GidA associated domain XM40_18855 PF01134 Glucose inhibited division protein A XM40_18860 PF01926 50S ribosome-binding GTPase XM40_18860 PF10396 GTP-binding protein TrmE N-terminus XM40_18860 PF12631 MnmE helical domain XM40_18865 PF14804 Jag N-terminus XM40_18865 PF01424 R3H domain XM40_18870 PF02096 60Kd inner membrane protein XM40_18875 PF00825 Ribonuclease P XM40_18880 PF11638 DnaA N-terminal domain XM40_18880 PF08299 Bacterial dnaA protein helix-turn-helix XM40_18880 PF00308 Bacterial dnaA protein XM40_18885 PF02767 DNA polymerase III beta subunit, central domain XM40_18885 PF02768 DNA polymerase III beta subunit, C-terminal domain XM40_18885 PF00712 DNA polymerase III beta subunit, N-terminal domain XM40_18895 PF02463 RecF/RecN/SMC N terminal domain XM40_18900 PF04025 Domain of unknown function (DUF370) XM40_18905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XM40_18905 PF00204 DNA gyrase B XM40_18905 PF00986 DNA gyrase B subunit, carboxyl terminus XM40_18905 PF01751 Toprim domain XM40_18910 PF00521 DNA gyrase/topoisomerase IV, subunit A XM40_18910 PF03989 DNA gyrase C-terminal domain, beta-propeller