AVM03_00030 SM00316 Ribosomal protein S1-like RNA-binding domain AVM03_00040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVM03_00040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVM03_00100 SM00859 Semialdehyde dehydrogenase, NAD binding domain AVM03_00120 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AVM03_00125 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVM03_00180 SM00825 Beta-ketoacyl synthase AVM03_00190 SM00382 ATPases associated with a variety of cellular activities AVM03_00195 SM00382 ATPases associated with a variety of cellular activities AVM03_00250 SM00382 ATPases associated with a variety of cellular activities AVM03_00255 SM00382 ATPases associated with a variety of cellular activities AVM03_00310 SM01118 AVM03_00310 AVM03_00320 SM00954 Region found in RelA / SpoT proteins AVM03_00445 SM00849 Metallo-beta-lactamase superfamily AVM03_00455 SM00382 ATPases associated with a variety of cellular activities AVM03_00460 SM00966 SpoVT / AbrB like domain AVM03_00555 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_00595 SM00420 helix_turn_helix, Deoxyribose operon repressor AVM03_00595 SM01134 AVM03_00595 AVM03_00605 SM00612 AVM03_00605 AVM03_00630 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AVM03_00630 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVM03_00665 SM00382 ATPases associated with a variety of cellular activities AVM03_00700 SM00354 helix_turn _helix lactose operon repressor AVM03_00710 SM00858 AVM03_00710 AVM03_00715 SM00448 cheY-homologous receiver domain AVM03_00715 SM00862 Transcriptional regulatory protein, C terminal AVM03_00720 SM00387 Histidine kinase-like ATPases AVM03_00720 SM00388 His Kinase A (phosphoacceptor) domain AVM03_00745 SM00028 Tetratricopeptide repeats AVM03_00755 SM00257 Lysin motif AVM03_00755 SM00644 AVM03_00755 AVM03_00775 SM00530 Helix-turn-helix XRE-family like proteins AVM03_00790 SM00382 ATPases associated with a variety of cellular activities AVM03_00880 SM00257 Lysin motif AVM03_00945 SM00257 Lysin motif AVM03_00945 SM00644 AVM03_00945 AVM03_00990 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AVM03_01015 SM00382 ATPases associated with a variety of cellular activities AVM03_01030 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AVM03_01040 SM00382 ATPases associated with a variety of cellular activities AVM03_01080 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AVM03_01095 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_01115 SM00028 Tetratricopeptide repeats AVM03_01130 SM00100 Cyclic nucleotide-monophosphate binding domain AVM03_01155 SM00382 ATPases associated with a variety of cellular activities AVM03_01165 SM00257 Lysin motif AVM03_01165 SM00636 AVM03_01165 AVM03_01170 SM00116 Domain in cystathionine beta-synthase and other proteins. AVM03_01170 SM00924 MgtE intracellular N domain AVM03_01175 SM00422 helix_turn_helix, mercury resistance AVM03_01185 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_01200 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AVM03_01260 SM00091 PAS domain AVM03_01260 SM00387 Histidine kinase-like ATPases AVM03_01260 SM00388 His Kinase A (phosphoacceptor) domain AVM03_01300 SM01007 Class II Aldolase and Adducin N-terminal domain AVM03_01315 SM00387 Histidine kinase-like ATPases AVM03_01315 SM00388 His Kinase A (phosphoacceptor) domain AVM03_01320 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_01335 SM00382 ATPases associated with a variety of cellular activities AVM03_01335 SM01086 C-terminal, D2-small domain, of ClpB protein AVM03_01410 SM00354 helix_turn _helix lactose operon repressor AVM03_01415 SM01061 CAT RNA binding domain AVM03_01445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVM03_01445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVM03_01465 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AVM03_01465 SM00091 PAS domain AVM03_01465 SM00387 Histidine kinase-like ATPases AVM03_01465 SM00388 His Kinase A (phosphoacceptor) domain AVM03_01475 SM00260 Two component signalling adaptor domain AVM03_01475 SM00448 cheY-homologous receiver domain AVM03_01490 SM00257 Lysin motif AVM03_01510 SM00052 Putative diguanylate phosphodiesterase AVM03_01600 SM00852 Probable molybdopterin binding domain AVM03_01630 SM00382 ATPases associated with a variety of cellular activities AVM03_01635 SM01066 Carbohydrate binding domain AVM03_01640 SM00420 helix_turn_helix, Deoxyribose operon repressor AVM03_01640 SM01134 AVM03_01640 AVM03_01665 SM00382 ATPases associated with a variety of cellular activities AVM03_01690 SM00966 SpoVT / AbrB like domain AVM03_01695 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AVM03_01695 SM00091 PAS domain AVM03_01695 SM00387 Histidine kinase-like ATPases AVM03_01695 SM00388 His Kinase A (phosphoacceptor) domain AVM03_01715 SM00849 Metallo-beta-lactamase superfamily AVM03_01745 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AVM03_01750 SM00822 AVM03_01750 AVM03_01750 SM00823 Phosphopantetheine attachment site AVM03_01750 SM00825 Beta-ketoacyl synthase AVM03_01750 SM00826 AVM03_01750 AVM03_01750 SM01294 AVM03_01750 AVM03_01755 SM00822 AVM03_01755 AVM03_01755 SM00823 Phosphopantetheine attachment site AVM03_01755 SM00825 Beta-ketoacyl synthase AVM03_01755 SM00826 AVM03_01755 AVM03_01760 SM00822 AVM03_01760 AVM03_01760 SM00823 Phosphopantetheine attachment site AVM03_01760 SM00825 Beta-ketoacyl synthase AVM03_01760 SM01294 AVM03_01760 AVM03_01765 SM00822 AVM03_01765 AVM03_01765 SM00823 Phosphopantetheine attachment site AVM03_01765 SM00825 Beta-ketoacyl synthase AVM03_01765 SM01294 AVM03_01765 AVM03_01770 SM00822 AVM03_01770 AVM03_01770 SM00823 Phosphopantetheine attachment site AVM03_01770 SM00825 Beta-ketoacyl synthase AVM03_01770 SM01294 AVM03_01770 AVM03_01775 SM00822 AVM03_01775 AVM03_01775 SM00823 Phosphopantetheine attachment site AVM03_01775 SM00825 Beta-ketoacyl synthase AVM03_01775 SM01294 AVM03_01775 AVM03_01780 SM00822 AVM03_01780 AVM03_01780 SM00823 Phosphopantetheine attachment site AVM03_01780 SM01294 AVM03_01780 AVM03_01795 SM00861 Transketolase, pyrimidine binding domain AVM03_01870 SM00838 Elongation factor G C-terminus AVM03_01890 SM00670 Large family of predicted nucleotide-binding domains AVM03_01915 SM00878 Biotin carboxylase C-terminal domain AVM03_01960 SM00116 Domain in cystathionine beta-synthase and other proteins. AVM03_02065 SM00740 AVM03_02065 AVM03_02070 SM00740 AVM03_02070 AVM03_02110 SM00842 Cell division protein FtsA AVM03_02115 SM00864 Tubulin/FtsZ family, GTPase domain AVM03_02115 SM00865 Tubulin/FtsZ family, C-terminal domain AVM03_02140 SM00382 ATPases associated with a variety of cellular activities AVM03_02175 SM00363 S4 RNA-binding domain AVM03_02205 SM00363 S4 RNA-binding domain AVM03_02230 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AVM03_02235 SM00851 MGS-like domain AVM03_02235 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVM03_02250 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AVM03_02300 SM00831 Cation transporter/ATPase, N-terminus AVM03_02315 SM00072 Guanylate kinase homologues. AVM03_02320 SM01409 AVM03_02320 AVM03_02330 SM00487 DEAD-like helicases superfamily AVM03_02330 SM00490 helicase superfamily c-terminal domain AVM03_02355 SM00331 Sigma factor PP2C-like phosphatases AVM03_02355 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AVM03_02360 SM00220 Serine/Threonine protein kinases, catalytic domain AVM03_02360 SM00740 AVM03_02360 AVM03_02375 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AVM03_02395 SM01120 AVM03_02395 AVM03_02395 SM01121 AVM03_02395 AVM03_02410 SM00487 DEAD-like helicases superfamily AVM03_02410 SM00490 helicase superfamily c-terminal domain AVM03_02425 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AVM03_02430 SM00822 AVM03_02430 AVM03_02440 SM00358 Double-stranded RNA binding motif AVM03_02440 SM00535 Ribonuclease III family AVM03_02445 SM00968 SMC proteins Flexible Hinge Domain AVM03_02450 SM00382 ATPases associated with a variety of cellular activities AVM03_02450 SM00962 SRP54-type protein, GTPase domain AVM03_02450 SM00963 SRP54-type protein, helical bundle domain AVM03_02465 SM00382 ATPases associated with a variety of cellular activities AVM03_02465 SM00962 SRP54-type protein, GTPase domain AVM03_02465 SM00963 SRP54-type protein, helical bundle domain AVM03_02525 SM00881 CoA binding domain AVM03_02535 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AVM03_02535 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AVM03_02535 SM00493 AVM03_02535 AVM03_02555 SM00382 ATPases associated with a variety of cellular activities AVM03_02555 SM01086 C-terminal, D2-small domain, of ClpB protein AVM03_02595 SM00382 ATPases associated with a variety of cellular activities AVM03_02645 SM00448 cheY-homologous receiver domain AVM03_02680 SM00962 SRP54-type protein, GTPase domain AVM03_02690 SM00448 cheY-homologous receiver domain AVM03_02695 SM00073 Histidine Phosphotransfer domain AVM03_02695 SM00260 Two component signalling adaptor domain AVM03_02695 SM00387 Histidine kinase-like ATPases AVM03_02695 SM01231 AVM03_02695 AVM03_02700 SM00260 Two component signalling adaptor domain AVM03_02760 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AVM03_02770 SM00479 AVM03_02770 AVM03_02770 SM00481 DNA polymerase alpha chain like domain AVM03_02780 SM00316 Ribosomal protein S1-like RNA-binding domain AVM03_02780 SM00322 K homology RNA-binding domain AVM03_02815 SM00904 Riboflavin kinase AVM03_02820 SM01387 AVM03_02820 AVM03_02825 SM00316 Ribosomal protein S1-like RNA-binding domain AVM03_02825 SM00322 K homology RNA-binding domain AVM03_02855 SM00859 Semialdehyde dehydrogenase, NAD binding domain AVM03_02865 SM01130 AVM03_02865 AVM03_02870 SM00849 Metallo-beta-lactamase superfamily AVM03_02885 SM00382 ATPases associated with a variety of cellular activities AVM03_02885 SM00843 AVM03_02885 AVM03_02890 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_02890 SM00866 AVM03_02890 AVM03_02900 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_02935 SM00530 Helix-turn-helix XRE-family like proteins AVM03_02945 SM00852 Probable molybdopterin binding domain AVM03_02950 SM00382 ATPases associated with a variety of cellular activities AVM03_02960 SM00322 K homology RNA-binding domain AVM03_02960 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AVM03_02975 SM00829 Enoylreductase AVM03_02985 SM00729 Elongator protein 3, MiaB family, Radical SAM AVM03_03000 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AVM03_03000 SM00534 ATPase domain of DNA mismatch repair MUTS family AVM03_03005 SM00853 MutL C terminal dimerisation domain AVM03_03005 SM01340 AVM03_03005 AVM03_03030 SM00849 Metallo-beta-lactamase superfamily AVM03_03035 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AVM03_03040 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AVM03_03045 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AVM03_03070 SM00822 AVM03_03070 AVM03_03070 SM00823 Phosphopantetheine attachment site AVM03_03070 SM00825 Beta-ketoacyl synthase AVM03_03070 SM00826 AVM03_03070 AVM03_03070 SM01294 AVM03_03070 AVM03_03075 SM00822 AVM03_03075 AVM03_03075 SM00823 Phosphopantetheine attachment site AVM03_03075 SM00825 Beta-ketoacyl synthase AVM03_03075 SM00826 AVM03_03075 AVM03_03075 SM01294 AVM03_03075 AVM03_03080 SM00822 AVM03_03080 AVM03_03080 SM00823 Phosphopantetheine attachment site AVM03_03080 SM00825 Beta-ketoacyl synthase AVM03_03080 SM00826 AVM03_03080 AVM03_03080 SM01294 AVM03_03080 AVM03_03085 SM00822 AVM03_03085 AVM03_03085 SM00823 Phosphopantetheine attachment site AVM03_03085 SM00825 Beta-ketoacyl synthase AVM03_03085 SM00826 AVM03_03085 AVM03_03085 SM01294 AVM03_03085 AVM03_03090 SM00823 Phosphopantetheine attachment site AVM03_03090 SM00825 Beta-ketoacyl synthase AVM03_03090 SM01294 AVM03_03090 AVM03_03195 SM00646 AVM03_03195 AVM03_03205 SM00382 ATPases associated with a variety of cellular activities AVM03_03220 SM00422 helix_turn_helix, mercury resistance AVM03_03225 SM01230 AVM03_03225 AVM03_03315 SM00829 Enoylreductase AVM03_03385 SM00710 Parallel beta-helix repeats AVM03_03430 SM00257 Lysin motif AVM03_03435 SM00857 Resolvase, N terminal domain AVM03_03445 SM00861 Transketolase, pyrimidine binding domain AVM03_03470 SM00448 cheY-homologous receiver domain AVM03_03535 SM01207 AVM03_03535 AVM03_03540 SM00881 CoA binding domain AVM03_03545 SM00387 Histidine kinase-like ATPases AVM03_03545 SM00433 TopoisomeraseII AVM03_03550 SM00434 DNA Topoisomerase IV AVM03_03570 SM00829 Enoylreductase AVM03_03590 SM00354 helix_turn _helix lactose operon repressor AVM03_03620 SM01067 Cellulose binding domain AVM03_03630 SM00387 Histidine kinase-like ATPases AVM03_03630 SM00388 His Kinase A (phosphoacceptor) domain AVM03_03635 SM00448 cheY-homologous receiver domain AVM03_03635 SM00862 Transcriptional regulatory protein, C terminal AVM03_03645 SM00606 Cellulose Binding Domain Type IV AVM03_03650 SM00823 Phosphopantetheine attachment site AVM03_03650 SM00824 Thioesterase AVM03_03655 SM00823 Phosphopantetheine attachment site AVM03_03660 SM00823 Phosphopantetheine attachment site AVM03_03660 SM00825 Beta-ketoacyl synthase AVM03_03665 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AVM03_03670 SM00822 AVM03_03670 AVM03_03675 SM00882 Coenzyme A transferase AVM03_03680 SM00882 Coenzyme A transferase AVM03_03695 SM00729 Elongator protein 3, MiaB family, Radical SAM AVM03_03695 SM00876 Biotin and Thiamin Synthesis associated domain AVM03_03755 SM00878 Biotin carboxylase C-terminal domain AVM03_03785 SM00823 Phosphopantetheine attachment site AVM03_03790 SM00823 Phosphopantetheine attachment site AVM03_03795 SM00823 Phosphopantetheine attachment site AVM03_03800 SM00823 Phosphopantetheine attachment site AVM03_03850 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AVM03_03865 SM00829 Enoylreductase AVM03_03885 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AVM03_03900 SM00822 AVM03_03900 AVM03_03930 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AVM03_03940 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_04035 SM00822 AVM03_04035 AVM03_04050 SM00342 helix_turn_helix, arabinose operon control protein AVM03_04060 SM00849 Metallo-beta-lactamase superfamily AVM03_04070 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AVM03_04105 SM00257 Lysin motif AVM03_04110 SM00341 Helicase and RNase D C-terminal AVM03_04110 SM00487 DEAD-like helicases superfamily AVM03_04110 SM00490 helicase superfamily c-terminal domain AVM03_04110 SM00956 AVM03_04110 AVM03_04185 SM00849 Metallo-beta-lactamase superfamily AVM03_04195 SM00861 Transketolase, pyrimidine binding domain AVM03_04200 SM00327 von Willebrand factor (vWF) type A domain AVM03_04205 SM00382 ATPases associated with a variety of cellular activities AVM03_04215 SM00257 Lysin motif AVM03_04320 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_04320 SM00866 AVM03_04320 AVM03_04325 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AVM03_04325 SM00245 tail specific protease AVM03_04355 SM00014 Acid phosphatase homologues AVM03_04400 SM00882 Coenzyme A transferase AVM03_04405 SM00882 Coenzyme A transferase AVM03_04415 SM00871 Bacterial transcription activator, effector binding domain AVM03_04500 SM00028 Tetratricopeptide repeats AVM03_04535 SM00860 SMI1 / KNR4 family AVM03_04540 SM00860 SMI1 / KNR4 family AVM03_04560 SM00857 Resolvase, N terminal domain AVM03_04580 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_04655 SM00567 E-Z type HEAT repeats AVM03_04655 SM00932 Scaffold protein Nfu/NifU N terminal AVM03_04660 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AVM03_04680 SM00357 Cold shock protein domain AVM03_04720 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AVM03_04720 SM00475 5'-3' exonuclease AVM03_04790 SM00491 AVM03_04790 AVM03_04800 SM00981 AVM03_04800 AVM03_04820 SM00487 DEAD-like helicases superfamily AVM03_04820 SM00490 helicase superfamily c-terminal domain AVM03_04870 SM00060 Fibronectin type 3 domain AVM03_04880 SM00478 endonuclease III AVM03_04880 SM00525 AVM03_04880 AVM03_04905 SM00479 AVM03_04905 AVM03_04905 SM00487 DEAD-like helicases superfamily AVM03_04905 SM00491 AVM03_04905 AVM03_04945 SM00851 MGS-like domain AVM03_04965 SM00835 Cupin AVM03_05000 SM00914 AVM03_05000 AVM03_05005 SM00028 Tetratricopeptide repeats AVM03_05070 SM00138 Methyltransferase, chemotaxis proteins AVM03_05075 SM00562 AVM03_05075 AVM03_05105 SM00411 bacterial (prokaryotic) histone like domain AVM03_05145 SM00316 Ribosomal protein S1-like RNA-binding domain AVM03_05180 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AVM03_05200 SM00257 Lysin motif AVM03_05210 SM00487 DEAD-like helicases superfamily AVM03_05210 SM00490 helicase superfamily c-terminal domain AVM03_05245 SM00091 PAS domain AVM03_05245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVM03_05245 SM00387 Histidine kinase-like ATPases AVM03_05245 SM00388 His Kinase A (phosphoacceptor) domain AVM03_05250 SM00448 cheY-homologous receiver domain AVM03_05250 SM00862 Transcriptional regulatory protein, C terminal AVM03_05270 SM00363 S4 RNA-binding domain AVM03_05405 SM00387 Histidine kinase-like ATPases AVM03_05415 SM00936 Penicillin-binding protein 5, C-terminal domain AVM03_05460 SM00919 Malic enzyme, NAD binding domain AVM03_05460 SM01274 AVM03_05460 AVM03_05475 SM00870 AVM03_05475 AVM03_05480 SM00530 Helix-turn-helix XRE-family like proteins AVM03_05580 SM00849 Metallo-beta-lactamase superfamily AVM03_05605 SM00823 Phosphopantetheine attachment site AVM03_05605 SM00825 Beta-ketoacyl synthase AVM03_05605 SM00829 Enoylreductase AVM03_05605 SM01294 AVM03_05605 AVM03_05610 SM00822 AVM03_05610 AVM03_05610 SM00825 Beta-ketoacyl synthase AVM03_05610 SM00826 AVM03_05610 AVM03_05615 SM00822 AVM03_05615 AVM03_05615 SM00823 Phosphopantetheine attachment site AVM03_05615 SM00825 Beta-ketoacyl synthase AVM03_05615 SM01294 AVM03_05615 AVM03_05620 SM00822 AVM03_05620 AVM03_05620 SM00823 Phosphopantetheine attachment site AVM03_05620 SM00825 Beta-ketoacyl synthase AVM03_05620 SM00826 AVM03_05620 AVM03_05620 SM01294 AVM03_05620 AVM03_05625 SM00822 AVM03_05625 AVM03_05625 SM00823 Phosphopantetheine attachment site AVM03_05625 SM00825 Beta-ketoacyl synthase AVM03_05625 SM00826 AVM03_05625 AVM03_05625 SM01294 AVM03_05625 AVM03_05630 SM00822 AVM03_05630 AVM03_05630 SM00823 Phosphopantetheine attachment site AVM03_05630 SM00825 Beta-ketoacyl synthase AVM03_05630 SM01294 AVM03_05630 AVM03_05635 SM00822 AVM03_05635 AVM03_05635 SM00823 Phosphopantetheine attachment site AVM03_05635 SM00825 Beta-ketoacyl synthase AVM03_05635 SM00826 AVM03_05635 AVM03_05635 SM01294 AVM03_05635 AVM03_05660 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AVM03_05665 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AVM03_05705 SM01350 AVM03_05705 AVM03_05750 SM00382 ATPases associated with a variety of cellular activities AVM03_05760 SM00062 Bacterial periplasmic substrate-binding proteins AVM03_05760 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AVM03_05770 SM00046 Diacylglycerol kinase catalytic domain (presumed) AVM03_05780 SM00861 Transketolase, pyrimidine binding domain AVM03_05800 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AVM03_05810 SM00091 PAS domain AVM03_05810 SM00382 ATPases associated with a variety of cellular activities AVM03_05855 SM00646 AVM03_05855 AVM03_05870 SM00530 Helix-turn-helix XRE-family like proteins AVM03_05895 SM01005 Alanine racemase, C-terminal domain AVM03_05900 SM00448 cheY-homologous receiver domain AVM03_05905 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AVM03_05920 SM00363 S4 RNA-binding domain AVM03_05925 SM00861 Transketolase, pyrimidine binding domain AVM03_05960 SM00878 Biotin carboxylase C-terminal domain AVM03_06005 SM00382 ATPases associated with a variety of cellular activities AVM03_06015 SM00841 Elongation factor P, C-terminal AVM03_06015 SM01185 AVM03_06015 AVM03_06045 SM00529 Helix-turn-helix diphteria tox regulatory element AVM03_06055 SM00450 Rhodanese Homology Domain AVM03_06075 SM00487 DEAD-like helicases superfamily AVM03_06075 SM00490 helicase superfamily c-terminal domain AVM03_06090 SM00530 Helix-turn-helix XRE-family like proteins AVM03_06150 SM00382 ATPases associated with a variety of cellular activities AVM03_06160 SM01091 Transporter associated domain AVM03_06185 SM00849 Metallo-beta-lactamase superfamily AVM03_06200 SM00631 AVM03_06200 AVM03_06235 SM00382 ATPases associated with a variety of cellular activities AVM03_06240 SM00382 ATPases associated with a variety of cellular activities AVM03_06285 SM00257 Lysin motif AVM03_06320 SM00518 AP endonuclease family 2 AVM03_06325 SM00487 DEAD-like helicases superfamily AVM03_06325 SM00490 helicase superfamily c-terminal domain AVM03_06360 SM00400 zinc finger AVM03_06360 SM00493 AVM03_06360 AVM03_06375 SM00116 Domain in cystathionine beta-synthase and other proteins. AVM03_06415 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AVM03_06465 SM00729 Elongator protein 3, MiaB family, Radical SAM AVM03_06480 SM00271 DnaJ molecular chaperone homology domain AVM03_06500 SM00729 Elongator protein 3, MiaB family, Radical SAM AVM03_06505 SM00838 Elongation factor G C-terminus AVM03_06535 SM00849 Metallo-beta-lactamase superfamily AVM03_06545 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AVM03_06565 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AVM03_06575 SM01103 AVM03_06575 AVM03_06635 SM00342 helix_turn_helix, arabinose operon control protein AVM03_06635 SM00871 Bacterial transcription activator, effector binding domain AVM03_06700 SM00849 Metallo-beta-lactamase superfamily AVM03_06750 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AVM03_06750 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AVM03_06835 SM00732 Likely ribonuclease with RNase H fold. AVM03_06845 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AVM03_06855 SM00382 ATPases associated with a variety of cellular activities AVM03_06860 SM00062 Bacterial periplasmic substrate-binding proteins AVM03_06860 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AVM03_06885 SM00382 ATPases associated with a variety of cellular activities AVM03_06890 SM00028 Tetratricopeptide repeats AVM03_06910 SM00382 ATPases associated with a variety of cellular activities AVM03_06930 SM00287 Bacterial SH3 domain homologues AVM03_06930 SM00646 AVM03_06930 AVM03_06940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AVM03_06940 SM00954 Region found in RelA / SpoT proteins AVM03_06990 SM01323 AVM03_06990 AVM03_07010 SM00382 ATPases associated with a variety of cellular activities AVM03_07015 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AVM03_07035 SM00257 Lysin motif AVM03_07080 SM01317 AVM03_07080 AVM03_07155 SM00644 AVM03_07155 AVM03_07265 SM00507 HNH nucleases AVM03_07305 SM00891 ERCC4 domain AVM03_07320 SM00885 D5 N terminal like AVM03_07350 SM00530 Helix-turn-helix XRE-family like proteins AVM03_07355 SM00530 Helix-turn-helix XRE-family like proteins AVM03_07365 SM00857 Resolvase, N terminal domain AVM03_07410 SM00257 Lysin motif AVM03_07420 SM01004 Delta-aminolevulinic acid dehydratase AVM03_07455 SM00382 ATPases associated with a variety of cellular activities AVM03_07455 SM00464 Found in ATP-dependent protease La (LON) AVM03_07460 SM00382 ATPases associated with a variety of cellular activities AVM03_07465 SM00382 ATPases associated with a variety of cellular activities AVM03_07465 SM00994 ClpX C4-type zinc finger AVM03_07465 SM01086 C-terminal, D2-small domain, of ClpB protein AVM03_07490 SM01329 AVM03_07490 AVM03_07495 SM00917 LeuA allosteric (dimerisation) domain AVM03_07550 SM00909 Sporulation and spore germination AVM03_07560 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_07565 SM00421 helix_turn_helix, Lux Regulon AVM03_07600 SM00465 GIY-YIG type nucleases (URI domain) AVM03_07610 SM00813 Alpha-L-arabinofuranosidase C-terminus AVM03_07615 SM00893 Electron transfer flavoprotein domain AVM03_07620 SM00893 Electron transfer flavoprotein domain AVM03_07650 SM00463 Small MutS-related domain AVM03_07650 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AVM03_07650 SM00534 ATPase domain of DNA mismatch repair MUTS family AVM03_07655 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AVM03_07655 SM00481 DNA polymerase alpha chain like domain AVM03_07655 SM00483 DNA polymerase X family AVM03_07675 SM00873 B3/4 domain AVM03_07675 SM00874 tRNA synthetase B5 domain AVM03_07675 SM00896 Ferredoxin-fold anticodon binding domain AVM03_07685 SM00967 RNA 2'-O ribose methyltransferase substrate binding AVM03_07715 SM00813 Alpha-L-arabinofuranosidase C-terminus AVM03_07745 SM01007 Class II Aldolase and Adducin N-terminal domain AVM03_07805 SM00448 cheY-homologous receiver domain AVM03_07805 SM00850 LytTr DNA-binding domain AVM03_07810 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AVM03_07810 SM00387 Histidine kinase-like ATPases AVM03_07820 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AVM03_07835 SM00382 ATPases associated with a variety of cellular activities AVM03_07855 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVM03_07885 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AVM03_07885 SM01232 AVM03_07885 AVM03_07890 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AVM03_07890 SM00474 3'-5' exonuclease AVM03_07890 SM00475 5'-3' exonuclease AVM03_07890 SM00482 DNA polymerase A domain AVM03_07895 SM00091 PAS domain AVM03_07895 SM00387 Histidine kinase-like ATPases AVM03_07895 SM00388 His Kinase A (phosphoacceptor) domain AVM03_07900 SM00448 cheY-homologous receiver domain AVM03_07900 SM00862 Transcriptional regulatory protein, C terminal AVM03_07910 SM01329 AVM03_07910 AVM03_07965 SM00919 Malic enzyme, NAD binding domain AVM03_07965 SM01274 AVM03_07965 AVM03_07970 SM00481 DNA polymerase alpha chain like domain AVM03_08000 SM00116 Domain in cystathionine beta-synthase and other proteins. AVM03_08005 SM00849 Metallo-beta-lactamase superfamily AVM03_08025 SM00852 Probable molybdopterin binding domain AVM03_08085 SM00981 AVM03_08085 AVM03_08120 SM00267 diguanylate cyclase AVM03_08125 SM00363 S4 RNA-binding domain AVM03_08125 SM01390 AVM03_08125 AVM03_08135 SM00860 SMI1 / KNR4 family AVM03_08210 SM00363 S4 RNA-binding domain AVM03_08225 SM00116 Domain in cystathionine beta-synthase and other proteins. AVM03_08245 SM00354 helix_turn _helix lactose operon repressor AVM03_08250 SM00830 Chorismate mutase type II AVM03_08275 SM00382 ATPases associated with a variety of cellular activities AVM03_08275 SM00843 AVM03_08275 AVM03_08310 SM00919 Malic enzyme, NAD binding domain AVM03_08310 SM01274 AVM03_08310 AVM03_08315 SM00849 Metallo-beta-lactamase superfamily AVM03_08335 SM00046 Diacylglycerol kinase catalytic domain (presumed) AVM03_08370 SM00382 ATPases associated with a variety of cellular activities AVM03_08375 SM00363 S4 RNA-binding domain AVM03_08400 SM00354 helix_turn _helix lactose operon repressor AVM03_08430 SM00450 Rhodanese Homology Domain AVM03_08445 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AVM03_08445 SM00091 PAS domain AVM03_08465 SM00382 ATPases associated with a variety of cellular activities AVM03_08470 SM00387 Histidine kinase-like ATPases AVM03_08475 SM00448 cheY-homologous receiver domain AVM03_08475 SM00862 Transcriptional regulatory protein, C terminal AVM03_08485 SM00382 ATPases associated with a variety of cellular activities AVM03_08505 SM00382 ATPases associated with a variety of cellular activities AVM03_08510 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_08520 SM00729 Elongator protein 3, MiaB family, Radical SAM AVM03_08590 SM00382 ATPases associated with a variety of cellular activities AVM03_08630 SM01234 AVM03_08630 AVM03_08635 SM00947 Carbonic anhydrase AVM03_08655 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AVM03_08820 SM00244 prohibitin homologues AVM03_08865 SM00047 Lysozyme subfamily 2 AVM03_08875 SM00835 Cupin AVM03_08890 SM00028 Tetratricopeptide repeats AVM03_08905 SM00860 SMI1 / KNR4 family AVM03_08915 SM00860 SMI1 / KNR4 family AVM03_08950 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVM03_08950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVM03_08950 SM00319 Homologues of the ligand binding domain of Tar AVM03_08955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVM03_08955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVM03_08955 SM00319 Homologues of the ligand binding domain of Tar AVM03_08960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVM03_08960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVM03_08960 SM00319 Homologues of the ligand binding domain of Tar AVM03_08965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVM03_08965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVM03_08965 SM00319 Homologues of the ligand binding domain of Tar AVM03_08990 SM00642 Alpha-amylase domain AVM03_08995 SM01091 Transporter associated domain AVM03_09065 SM00316 Ribosomal protein S1-like RNA-binding domain AVM03_09075 SM00344 helix_turn_helix ASNC type AVM03_09095 SM00387 Histidine kinase-like ATPases AVM03_09095 SM00388 His Kinase A (phosphoacceptor) domain AVM03_09100 SM01298 AVM03_09100 AVM03_09105 SM00479 AVM03_09105 AVM03_09130 SM00091 PAS domain AVM03_09130 SM00387 Histidine kinase-like ATPases AVM03_09135 SM00448 cheY-homologous receiver domain AVM03_09145 SM00382 ATPases associated with a variety of cellular activities AVM03_09205 SM00421 helix_turn_helix, Lux Regulon AVM03_09205 SM00448 cheY-homologous receiver domain AVM03_09210 SM00387 Histidine kinase-like ATPases AVM03_09240 SM00052 Putative diguanylate phosphodiesterase AVM03_09280 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AVM03_09295 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AVM03_09295 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AVM03_09305 SM00923 MbtH-like protein AVM03_09310 SM00823 Phosphopantetheine attachment site AVM03_09310 SM00824 Thioesterase AVM03_09330 SM00822 AVM03_09330 AVM03_09390 SM01240 AVM03_09390 AVM03_09405 SM00382 ATPases associated with a variety of cellular activities AVM03_09425 SM00422 helix_turn_helix, mercury resistance AVM03_09515 SM00729 Elongator protein 3, MiaB family, Radical SAM AVM03_09600 SM00382 ATPases associated with a variety of cellular activities AVM03_09605 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_09605 SM00866 AVM03_09605 AVM03_09635 SM00422 helix_turn_helix, mercury resistance AVM03_09645 SM00752 Horizontally Transferred TransMembrane Domain AVM03_09660 SM00465 GIY-YIG type nucleases (URI domain) AVM03_09705 SM00382 ATPases associated with a variety of cellular activities AVM03_09725 SM00382 ATPases associated with a variety of cellular activities AVM03_09725 SM00930 AVM03_09725 AVM03_09740 SM00493 AVM03_09740 AVM03_09795 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_09825 SM00382 ATPases associated with a variety of cellular activities AVM03_09850 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AVM03_09855 SM00448 cheY-homologous receiver domain AVM03_09855 SM00862 Transcriptional regulatory protein, C terminal AVM03_09860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVM03_09860 SM00387 Histidine kinase-like ATPases AVM03_09860 SM00388 His Kinase A (phosphoacceptor) domain AVM03_09895 SM00421 helix_turn_helix, Lux Regulon AVM03_09895 SM00448 cheY-homologous receiver domain AVM03_09900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVM03_09900 SM00387 Histidine kinase-like ATPases AVM03_09935 SM00382 ATPases associated with a variety of cellular activities AVM03_09960 SM00387 Histidine kinase-like ATPases AVM03_09960 SM00388 His Kinase A (phosphoacceptor) domain AVM03_09965 SM00448 cheY-homologous receiver domain AVM03_09965 SM00862 Transcriptional regulatory protein, C terminal AVM03_09980 SM00835 Cupin AVM03_09990 SM00382 ATPases associated with a variety of cellular activities AVM03_10050 SM00421 helix_turn_helix, Lux Regulon AVM03_10050 SM00448 cheY-homologous receiver domain AVM03_10060 SM00382 ATPases associated with a variety of cellular activities AVM03_10160 SM00530 Helix-turn-helix XRE-family like proteins AVM03_10195 SM00382 ATPases associated with a variety of cellular activities AVM03_10210 SM00062 Bacterial periplasmic substrate-binding proteins AVM03_10215 SM00062 Bacterial periplasmic substrate-binding proteins AVM03_10245 SM00316 Ribosomal protein S1-like RNA-binding domain AVM03_10245 SM00357 Cold shock protein domain AVM03_10245 SM00955 AVM03_10245 AVM03_10260 SM00530 Helix-turn-helix XRE-family like proteins AVM03_10265 SM00530 Helix-turn-helix XRE-family like proteins AVM03_10270 SM00530 Helix-turn-helix XRE-family like proteins AVM03_10280 SM00387 Histidine kinase-like ATPases AVM03_10280 SM00388 His Kinase A (phosphoacceptor) domain AVM03_10285 SM00448 cheY-homologous receiver domain AVM03_10285 SM00862 Transcriptional regulatory protein, C terminal AVM03_10300 SM00382 ATPases associated with a variety of cellular activities AVM03_10320 SM00116 Domain in cystathionine beta-synthase and other proteins. AVM03_10320 SM00382 ATPases associated with a variety of cellular activities AVM03_10345 SM00116 Domain in cystathionine beta-synthase and other proteins. AVM03_10345 SM00382 ATPases associated with a variety of cellular activities AVM03_10415 SM00984 UDP binding domain AVM03_10425 SM01192 AVM03_10425 AVM03_10425 SM01193 AVM03_10425 AVM03_10450 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVM03_10465 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_10530 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_10530 SM00895 AVM03_10530 AVM03_10625 SM00530 Helix-turn-helix XRE-family like proteins AVM03_10700 SM00640 Glycosyl hydrolases family 32 AVM03_10710 SM00354 helix_turn _helix lactose operon repressor AVM03_10750 SM00947 Carbonic anhydrase AVM03_10810 SM00028 Tetratricopeptide repeats AVM03_10815 SM00387 Histidine kinase-like ATPases AVM03_10815 SM00388 His Kinase A (phosphoacceptor) domain AVM03_10820 SM00448 cheY-homologous receiver domain AVM03_10820 SM00862 Transcriptional regulatory protein, C terminal AVM03_10830 SM00382 ATPases associated with a variety of cellular activities AVM03_10910 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_10910 SM00866 AVM03_10910 AVM03_10950 SM00382 ATPases associated with a variety of cellular activities AVM03_10955 SM00487 DEAD-like helicases superfamily AVM03_10955 SM00490 helicase superfamily c-terminal domain AVM03_11000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AVM03_11010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AVM03_11010 SM00245 tail specific protease AVM03_11015 SM00710 Parallel beta-helix repeats AVM03_11025 SM00382 ATPases associated with a variety of cellular activities AVM03_11040 SM00937 AVM03_11040 AVM03_11045 SM00957 SecA DEAD-like domain AVM03_11045 SM00958 SecA preprotein cross-linking domain AVM03_11130 SM00487 DEAD-like helicases superfamily AVM03_11130 SM00490 helicase superfamily c-terminal domain AVM03_11140 SM00421 helix_turn_helix, Lux Regulon AVM03_11140 SM00448 cheY-homologous receiver domain AVM03_11145 SM00387 Histidine kinase-like ATPases AVM03_11185 SM00984 UDP binding domain AVM03_11205 SM00646 AVM03_11205 AVM03_11235 SM00382 ATPases associated with a variety of cellular activities AVM03_11270 SM00047 Lysozyme subfamily 2 AVM03_11270 SM00287 Bacterial SH3 domain homologues AVM03_11325 SM00854 Bacterial capsule synthesis protein PGA_cap AVM03_11355 SM00354 helix_turn _helix lactose operon repressor AVM03_11370 SM00382 ATPases associated with a variety of cellular activities AVM03_11385 SM00287 Bacterial SH3 domain homologues AVM03_11435 SM00903 Flavin reductase like domain AVM03_11450 SM00344 helix_turn_helix ASNC type AVM03_11485 SM00984 UDP binding domain AVM03_11515 SM00487 DEAD-like helicases superfamily AVM03_11515 SM00490 helicase superfamily c-terminal domain AVM03_11525 SM00420 helix_turn_helix, Deoxyribose operon repressor AVM03_11525 SM01134 AVM03_11525 AVM03_11555 SM00028 Tetratricopeptide repeats AVM03_11580 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_11610 SM00938 Nitrogen regulatory protein P-II AVM03_11620 SM00014 Acid phosphatase homologues AVM03_11650 SM00155 Phospholipase D. Active site motifs. AVM03_11700 SM00028 Tetratricopeptide repeats AVM03_11705 SM00729 Elongator protein 3, MiaB family, Radical SAM AVM03_11715 SM00327 von Willebrand factor (vWF) type A domain AVM03_11720 SM00327 von Willebrand factor (vWF) type A domain AVM03_11755 SM00382 ATPases associated with a variety of cellular activities AVM03_11815 SM00226 Low molecular weight phosphatase family AVM03_11855 SM00937 AVM03_11855 AVM03_11875 SM00919 Malic enzyme, NAD binding domain AVM03_11875 SM01274 AVM03_11875 AVM03_11890 SM00357 Cold shock protein domain AVM03_11890 SM00382 ATPases associated with a variety of cellular activities AVM03_11890 SM00959 Rho termination factor, N-terminal domain AVM03_11915 SM00448 cheY-homologous receiver domain AVM03_11940 SM00155 Phospholipase D. Active site motifs. AVM03_11955 SM00382 ATPases associated with a variety of cellular activities AVM03_11960 SM00155 Phospholipase D. Active site motifs. AVM03_11985 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AVM03_12000 SM00100 Cyclic nucleotide-monophosphate binding domain AVM03_12000 SM00419 helix_turn_helix, cAMP Regulatory protein AVM03_12010 SM00836 DALR anticodon binding domain AVM03_12010 SM01016 Arginyl tRNA synthetase N terminal dom AVM03_12020 SM00028 Tetratricopeptide repeats AVM03_12060 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_12080 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AVM03_12190 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AVM03_12230 SM00858 AVM03_12230 AVM03_12275 SM00986 Uracil DNA glycosylase superfamily AVM03_12275 SM00987 UreE urease accessory protein, C-terminal domain AVM03_12310 SM00640 Glycosyl hydrolases family 32 AVM03_12320 SM01061 CAT RNA binding domain AVM03_12465 SM00422 helix_turn_helix, mercury resistance AVM03_12470 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AVM03_12495 SM00954 Region found in RelA / SpoT proteins AVM03_12580 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AVM03_12625 SM01060 AVM03_12625 AVM03_12645 SM00382 ATPases associated with a variety of cellular activities AVM03_12650 SM00382 ATPases associated with a variety of cellular activities AVM03_12675 SM00382 ATPases associated with a variety of cellular activities AVM03_12735 SM01060 AVM03_12735 AVM03_12760 SM00487 DEAD-like helicases superfamily AVM03_12760 SM00490 helicase superfamily c-terminal domain AVM03_12815 SM00656 AVM03_12815 AVM03_12895 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AVM03_12905 SM01133 AVM03_12905 AVM03_12960 SM00382 ATPases associated with a variety of cellular activities AVM03_12965 SM00387 Histidine kinase-like ATPases AVM03_12970 SM00448 cheY-homologous receiver domain AVM03_12970 SM00862 Transcriptional regulatory protein, C terminal AVM03_12975 SM00387 Histidine kinase-like ATPases AVM03_12975 SM00388 His Kinase A (phosphoacceptor) domain AVM03_12980 SM00448 cheY-homologous receiver domain AVM03_12980 SM00862 Transcriptional regulatory protein, C terminal AVM03_12985 SM00382 ATPases associated with a variety of cellular activities AVM03_13005 SM00862 Transcriptional regulatory protein, C terminal AVM03_13015 SM01260 AVM03_13015 AVM03_13020 SM00382 ATPases associated with a variety of cellular activities AVM03_13075 SM00420 helix_turn_helix, Deoxyribose operon repressor AVM03_13075 SM01134 AVM03_13075 AVM03_13090 SM00387 Histidine kinase-like ATPases AVM03_13105 SM00421 helix_turn_helix, Lux Regulon AVM03_13105 SM00448 cheY-homologous receiver domain AVM03_13135 SM00564 beta-propeller repeat AVM03_13145 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AVM03_13190 SM01092 CO dehydrogenase flavoprotein C-terminal domain AVM03_13195 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVM03_13275 SM00028 Tetratricopeptide repeats AVM03_13300 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AVM03_13305 SM00382 ATPases associated with a variety of cellular activities AVM03_13310 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AVM03_13315 SM00382 ATPases associated with a variety of cellular activities AVM03_13335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVM03_13335 SM00387 Histidine kinase-like ATPases AVM03_13335 SM00388 His Kinase A (phosphoacceptor) domain AVM03_13345 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AVM03_13350 SM00849 Metallo-beta-lactamase superfamily AVM03_13365 SM00091 PAS domain AVM03_13365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVM03_13365 SM00387 Histidine kinase-like ATPases AVM03_13365 SM00388 His Kinase A (phosphoacceptor) domain AVM03_13370 SM00448 cheY-homologous receiver domain AVM03_13370 SM00862 Transcriptional regulatory protein, C terminal AVM03_13400 SM00788 Adenylosuccinate synthetase AVM03_13410 SM00382 ATPases associated with a variety of cellular activities AVM03_13465 SM00267 diguanylate cyclase AVM03_13485 SM01131 AVM03_13485 AVM03_13510 SM00640 Glycosyl hydrolases family 32 AVM03_13515 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_13515 SM00895 AVM03_13515 AVM03_13535 SM00422 helix_turn_helix, mercury resistance AVM03_13570 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_13580 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_13610 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_13620 SM00422 helix_turn_helix, mercury resistance AVM03_13620 SM00871 Bacterial transcription activator, effector binding domain AVM03_13650 SM00354 helix_turn _helix lactose operon repressor AVM03_13665 SM00342 helix_turn_helix, arabinose operon control protein AVM03_13690 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AVM03_13715 SM00470 ParB-like nuclease domain AVM03_13725 SM00470 ParB-like nuclease domain AVM03_13735 SM01228 AVM03_13735 AVM03_13745 SM00393 Putative single-stranded nucleic acids-binding domain AVM03_13745 SM01245 AVM03_13745 AVM03_13760 SM00382 ATPases associated with a variety of cellular activities AVM03_13760 SM00760 Bacterial dnaA protein helix-turn-helix domain AVM03_13765 SM00480 DNA polymerase III beta subunit AVM03_13785 SM00387 Histidine kinase-like ATPases AVM03_13785 SM00433 TopoisomeraseII AVM03_13790 SM00434 DNA Topoisomerase IV AVM03_13825 SM00116 Domain in cystathionine beta-synthase and other proteins. AVM03_13825 SM01240 AVM03_13825 AVM03_13830 SM00936 Penicillin-binding protein 5, C-terminal domain AVM03_13870 SM00257 Lysin motif AVM03_13870 SM00636 AVM03_13870 AVM03_13885 SM00382 ATPases associated with a variety of cellular activities AVM03_13895 SM00493 AVM03_13895 AVM03_13990 SM00465 GIY-YIG type nucleases (URI domain) AVM03_14000 SM00966 SpoVT / AbrB like domain AVM03_14015 SM01208 AVM03_14015 AVM03_14020 SM00493 AVM03_14020 AVM03_14025 SM00650 Ribosomal RNA adenine dimethylases AVM03_14070 SM01400 AVM03_14070 AVM03_14090 SM00487 DEAD-like helicases superfamily AVM03_14090 SM00490 helicase superfamily c-terminal domain AVM03_14090 SM00982 AVM03_14090 AVM03_14090 SM01058 CarD-like/TRCF domain AVM03_14095 SM00966 SpoVT / AbrB like domain AVM03_14110 SM00363 S4 RNA-binding domain AVM03_14130 SM00316 Ribosomal protein S1-like RNA-binding domain AVM03_14145 SM00331 Sigma factor PP2C-like phosphatases AVM03_14145 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AVM03_14155 SM00220 Serine/Threonine protein kinases, catalytic domain AVM03_14160 SM00977 TilS substrate C-terminal domain AVM03_14170 SM00382 ATPases associated with a variety of cellular activities AVM03_14215 SM00905 Dihydroneopterin aldolase AVM03_14225 SM00530 Helix-turn-helix XRE-family like proteins AVM03_14330 SM00382 ATPases associated with a variety of cellular activities AVM03_14330 SM01086 C-terminal, D2-small domain, of ClpB protein AVM03_14340 SM01260 AVM03_14340 AVM03_14345 SM00382 ATPases associated with a variety of cellular activities AVM03_14355 SM00382 ATPases associated with a variety of cellular activities AVM03_14365 SM00670 Large family of predicted nucleotide-binding domains AVM03_14390 SM00840 AVM03_14390 AVM03_14395 SM00535 Ribonuclease III family AVM03_14400 SM00967 RNA 2'-O ribose methyltransferase substrate binding AVM03_14425 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AVM03_14425 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AVM03_14430 SM00649 Ribosomal protein L11/L12 AVM03_14460 SM00663 RNA polymerase I subunit A N-terminus AVM03_14480 SM00838 Elongation factor G C-terminus AVM03_14480 SM00889 Elongation factor G, domain IV AVM03_14495 SM01403 AVM03_14495 AVM03_14515 SM01382 AVM03_14515 AVM03_14515 SM01383 AVM03_14515 AVM03_14530 SM00322 K homology RNA-binding domain AVM03_14550 SM01374 AVM03_14550 AVM03_14555 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AVM03_14610 SM00316 Ribosomal protein S1-like RNA-binding domain AVM03_14630 SM00662 RNA polymerases D AVM03_14640 SM00382 ATPases associated with a variety of cellular activities AVM03_14645 SM00382 ATPases associated with a variety of cellular activities AVM03_14685 SM00646 AVM03_14685 AVM03_14700 SM01251 AVM03_14700 AVM03_14780 SM00829 Enoylreductase AVM03_14815 SM00342 helix_turn_helix, arabinose operon control protein AVM03_14910 SM00382 ATPases associated with a variety of cellular activities AVM03_14945 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_14965 SM00421 helix_turn_helix, Lux Regulon AVM03_14965 SM00448 cheY-homologous receiver domain AVM03_14970 SM00382 ATPases associated with a variety of cellular activities AVM03_15050 SM00530 Helix-turn-helix XRE-family like proteins AVM03_15085 SM00450 Rhodanese Homology Domain AVM03_15120 SM00387 Histidine kinase-like ATPases AVM03_15125 SM00448 cheY-homologous receiver domain AVM03_15250 SM00028 Tetratricopeptide repeats AVM03_15260 SM00642 Alpha-amylase domain AVM03_15270 SM00382 ATPases associated with a variety of cellular activities AVM03_15320 SM00116 Domain in cystathionine beta-synthase and other proteins. AVM03_15320 SM00382 ATPases associated with a variety of cellular activities AVM03_15350 SM00632 AVM03_15350 AVM03_15350 SM00642 Alpha-amylase domain AVM03_15365 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_15470 SM00833 Cobalamin synthesis protein cobW C-terminal domain AVM03_15510 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AVM03_15520 SM00823 Phosphopantetheine attachment site AVM03_15520 SM01294 AVM03_15520 AVM03_15525 SM00823 Phosphopantetheine attachment site AVM03_15525 SM01294 AVM03_15525 AVM03_15530 SM00823 Phosphopantetheine attachment site AVM03_15530 SM00824 Thioesterase AVM03_15555 SM00382 ATPases associated with a variety of cellular activities AVM03_15565 SM00062 Bacterial periplasmic substrate-binding proteins AVM03_15600 SM00710 Parallel beta-helix repeats AVM03_15600 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AVM03_15635 SM00062 Bacterial periplasmic substrate-binding proteins AVM03_15645 SM00382 ATPases associated with a variety of cellular activities AVM03_15660 SM00382 ATPases associated with a variety of cellular activities AVM03_15670 SM00448 cheY-homologous receiver domain AVM03_15670 SM00862 Transcriptional regulatory protein, C terminal AVM03_15675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AVM03_15675 SM00387 Histidine kinase-like ATPases AVM03_15675 SM00388 His Kinase A (phosphoacceptor) domain AVM03_15680 SM00028 Tetratricopeptide repeats AVM03_15705 SM00382 ATPases associated with a variety of cellular activities AVM03_15735 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AVM03_15740 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_15775 SM00420 helix_turn_helix, Deoxyribose operon repressor AVM03_15825 SM00796 Allophanate hydrolase subunit 1 AVM03_15830 SM00797 Allophanate hydrolase subunit 2 AVM03_15835 SM00346 helix_turn_helix isocitrate lyase regulation AVM03_15905 SM00344 helix_turn_helix ASNC type AVM03_15910 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AVM03_15910 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AVM03_15910 SM00493 AVM03_15910 AVM03_15920 SM00267 diguanylate cyclase AVM03_15995 SM00028 Tetratricopeptide repeats AVM03_16085 SM00091 PAS domain AVM03_16085 SM00387 Histidine kinase-like ATPases AVM03_16090 SM00448 cheY-homologous receiver domain AVM03_16105 SM00382 ATPases associated with a variety of cellular activities AVM03_16150 SM00487 DEAD-like helicases superfamily AVM03_16150 SM00490 helicase superfamily c-terminal domain AVM03_16180 SM01005 Alanine racemase, C-terminal domain AVM03_16205 SM00387 Histidine kinase-like ATPases AVM03_16210 SM00331 Sigma factor PP2C-like phosphatases AVM03_16230 SM00331 Sigma factor PP2C-like phosphatases AVM03_16230 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AVM03_16235 SM00316 Ribosomal protein S1-like RNA-binding domain AVM03_16235 SM00732 Likely ribonuclease with RNase H fold. AVM03_16240 SM00731 SprT homologues. AVM03_16305 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_16320 SM00357 Cold shock protein domain AVM03_16345 SM00450 Rhodanese Homology Domain AVM03_16350 SM00450 Rhodanese Homology Domain AVM03_16350 SM00849 Metallo-beta-lactamase superfamily AVM03_16395 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_16395 SM00895 AVM03_16395 AVM03_16415 SM00342 helix_turn_helix, arabinose operon control protein AVM03_16425 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_16480 SM01130 AVM03_16480 AVM03_16505 SM00829 Enoylreductase AVM03_16510 SM00422 helix_turn_helix, mercury resistance AVM03_16520 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_16570 SM00387 Histidine kinase-like ATPases AVM03_16575 SM00421 helix_turn_helix, Lux Regulon AVM03_16575 SM00448 cheY-homologous receiver domain AVM03_16590 SM00382 ATPases associated with a variety of cellular activities AVM03_16615 SM00825 Beta-ketoacyl synthase AVM03_16620 SM00530 Helix-turn-helix XRE-family like proteins AVM03_16635 SM00422 helix_turn_helix, mercury resistance AVM03_16655 SM01329 AVM03_16655 AVM03_16660 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_16660 SM00895 AVM03_16660 AVM03_16695 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_16695 SM00866 AVM03_16695 AVM03_16700 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_16700 SM00895 AVM03_16700 AVM03_16740 SM00829 Enoylreductase AVM03_16810 SM00382 ATPases associated with a variety of cellular activities AVM03_16820 SM00881 CoA binding domain AVM03_16845 SM00883 Chaperonin 10 Kd subunit AVM03_16865 SM00028 Tetratricopeptide repeats AVM03_16865 SM00382 ATPases associated with a variety of cellular activities AVM03_16870 SM00829 Enoylreductase AVM03_16925 SM00829 Enoylreductase AVM03_16965 SM00460 Transglutaminase/protease-like homologues AVM03_17010 SM01001 AIR carboxylase AVM03_17020 SM00998 Adenylosuccinate lyase C-terminus AVM03_17035 SM01211 AVM03_17035 AVM03_17060 SM00798 AICARFT/IMPCHase bienzyme AVM03_17060 SM00851 MGS-like domain AVM03_17065 SM01209 AVM03_17065 AVM03_17065 SM01210 AVM03_17065 AVM03_17110 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AVM03_17110 SM00292 breast cancer carboxy-terminal domain AVM03_17110 SM00532 Ligase N family AVM03_17145 SM00845 GatB domain AVM03_17160 SM00046 Diacylglycerol kinase catalytic domain (presumed) AVM03_17170 SM00421 helix_turn_helix, Lux Regulon AVM03_17170 SM00448 cheY-homologous receiver domain AVM03_17190 SM00825 Beta-ketoacyl synthase AVM03_17205 SM00382 ATPases associated with a variety of cellular activities AVM03_17300 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_17330 SM00382 ATPases associated with a variety of cellular activities AVM03_17395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVM03_17410 SM00382 ATPases associated with a variety of cellular activities AVM03_17415 SM00422 helix_turn_helix, mercury resistance AVM03_17425 SM00382 ATPases associated with a variety of cellular activities AVM03_17430 SM00487 DEAD-like helicases superfamily AVM03_17430 SM00490 helicase superfamily c-terminal domain AVM03_17440 SM00829 Enoylreductase AVM03_17455 SM00656 AVM03_17455 AVM03_17480 SM00387 Histidine kinase-like ATPases AVM03_17480 SM00388 His Kinase A (phosphoacceptor) domain AVM03_17480 SM00448 cheY-homologous receiver domain AVM03_17485 SM00448 cheY-homologous receiver domain AVM03_17485 SM00862 Transcriptional regulatory protein, C terminal AVM03_17500 SM00091 PAS domain AVM03_17500 SM00387 Histidine kinase-like ATPases AVM03_17505 SM00448 cheY-homologous receiver domain AVM03_17520 SM00849 Metallo-beta-lactamase superfamily AVM03_17590 SM00642 Alpha-amylase domain AVM03_17595 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_17595 SM00866 AVM03_17595 AVM03_17625 SM00354 helix_turn _helix lactose operon repressor AVM03_17650 SM00226 Low molecular weight phosphatase family AVM03_17715 SM00478 endonuclease III AVM03_17745 SM00861 Transketolase, pyrimidine binding domain AVM03_17760 SM00382 ATPases associated with a variety of cellular activities AVM03_17785 SM00382 ATPases associated with a variety of cellular activities AVM03_17790 SM00382 ATPases associated with a variety of cellular activities AVM03_17845 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_17910 SM00287 Bacterial SH3 domain homologues AVM03_17940 SM00478 endonuclease III AVM03_17940 SM00525 AVM03_17940 AVM03_17970 SM00382 ATPases associated with a variety of cellular activities AVM03_18130 SM00382 ATPases associated with a variety of cellular activities AVM03_18135 SM00382 ATPases associated with a variety of cellular activities AVM03_18140 SM01060 AVM03_18140 AVM03_18150 SM00382 ATPases associated with a variety of cellular activities AVM03_18155 SM00062 Bacterial periplasmic substrate-binding proteins AVM03_18180 SM00530 Helix-turn-helix XRE-family like proteins AVM03_18195 SM00567 E-Z type HEAT repeats AVM03_18225 SM00763 PrkA AAA domain AVM03_18235 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_18265 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_18270 SM00382 ATPases associated with a variety of cellular activities AVM03_18275 SM00382 ATPases associated with a variety of cellular activities AVM03_18285 SM00357 Cold shock protein domain AVM03_18295 SM00267 diguanylate cyclase AVM03_18335 SM00363 S4 RNA-binding domain AVM03_18345 SM00116 Domain in cystathionine beta-synthase and other proteins. AVM03_18415 SM00257 Lysin motif AVM03_18435 SM00098 Alkaline phosphatase homologues AVM03_18440 SM00257 Lysin motif AVM03_18485 SM00563 Phosphate acyltransferases AVM03_18490 SM01091 Transporter associated domain AVM03_18495 SM00422 helix_turn_helix, mercury resistance AVM03_18505 SM00825 Beta-ketoacyl synthase AVM03_18510 SM01091 Transporter associated domain AVM03_18565 SM00382 ATPases associated with a variety of cellular activities AVM03_18570 SM00382 ATPases associated with a variety of cellular activities AVM03_18620 SM00729 Elongator protein 3, MiaB family, Radical SAM AVM03_18655 SM00382 ATPases associated with a variety of cellular activities AVM03_18675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AVM03_18715 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_18745 SM00382 ATPases associated with a variety of cellular activities AVM03_18825 SM00849 Metallo-beta-lactamase superfamily AVM03_18870 SM00855 Phosphoglycerate mutase family AVM03_18890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AVM03_18905 SM00914 AVM03_18905 AVM03_18930 SM00894 Excalibur calcium-binding domain AVM03_18970 SM00347 helix_turn_helix multiple antibiotic resistance protein AVM03_19095 SM00342 helix_turn_helix, arabinose operon control protein AVM03_19100 SM00354 helix_turn _helix lactose operon repressor AVM03_19120 SM00345 helix_turn_helix gluconate operon transcriptional repressor AVM03_19145 SM00316 Ribosomal protein S1-like RNA-binding domain AVM03_19230 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain