AS588_00005 PF00308 Bacterial dnaA protein AS588_00005 PF08299 Bacterial dnaA protein helix-turn-helix AS588_00005 PF11638 DnaA N-terminal domain AS588_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AS588_00010 PF02767 DNA polymerase III beta subunit, central domain AS588_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AS588_00015 PF13275 S4 domain AS588_00020 PF02463 RecF/RecN/SMC N terminal domain AS588_00025 PF04025 AS588_00025 AS588_00030 PF00204 DNA gyrase B AS588_00030 PF00986 DNA gyrase B subunit, carboxyl terminus AS588_00030 PF01751 Toprim domain AS588_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A AS588_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller AS588_00075 PF00586 AIR synthase related protein, N-terminal domain AS588_00075 PF02769 AIR synthase related protein, C-terminal domain AS588_00080 PF02367 Uncharacterised P-loop hydrolase UPF0079 AS588_00090 PF00583 Acetyltransferase (GNAT) family AS588_00105 PF01967 MoaC family AS588_00110 PF02629 CoA binding domain AS588_00110 PF06971 Putative DNA-binding protein N-terminus AS588_00115 PF02416 mttA/Hcf106 family AS588_00120 PF00902 Sec-independent protein translocase protein (TatC) AS588_00125 PF14146 AS588_00125 AS588_00130 PF02517 CAAX protease self-immunity AS588_00135 PF00166 Chaperonin 10 Kd subunit AS588_00140 PF00118 TCP-1/cpn60 chaperonin family AS588_00145 PF01471 Putative peptidoglycan binding domain AS588_00145 PF08924 Domain of unknown function (DUF1906) AS588_00160 PF00931 NB-ARC domain AS588_00160 PF13181 Tetratricopeptide repeat AS588_00160 PF13432 Tetratricopeptide repeat AS588_00165 PF00107 Zinc-binding dehydrogenase AS588_00165 PF08240 Alcohol dehydrogenase GroES-like domain AS588_00170 PF13347 MFS/sugar transport protein AS588_00175 PF00294 pfkB family carbohydrate kinase AS588_00180 PF14154 AS588_00180 AS588_00185 PF04012 AS588_00185 AS588_00190 PF08271 TFIIB zinc-binding AS588_00195 PF04536 TLP18 AS588_00200 PF13248 AS588_00200 AS588_00200 PF13421 AS588_00200 AS588_00205 PF01757 AS588_00205 AS588_00210 PF11738 Protein of unknown function (DUF3298) AS588_00210 PF13739 Domain of unknown function (DUF4163) AS588_00215 PF04542 Sigma-70 region 2 AS588_00215 PF08281 Sigma-70, region 4 AS588_00220 PF00107 Zinc-binding dehydrogenase AS588_00220 PF08240 Alcohol dehydrogenase GroES-like domain AS588_00225 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel AS588_00230 PF07676 WD40-like Beta Propeller Repeat AS588_00240 PF14169 AS588_00240 AS588_00245 PF00394 Multicopper oxidase AS588_00245 PF07731 Multicopper oxidase AS588_00245 PF07732 Multicopper oxidase AS588_00250 PF00324 Amino acid permease AS588_00255 PF07726 ATPase family associated with various cellular activities (AAA) AS588_00260 PF01882 AS588_00260 AS588_00265 PF01841 Transglutaminase-like superfamily AS588_00265 PF13559 AS588_00265 AS588_00270 PF00117 Glutamine amidotransferase class-I AS588_00270 PF00958 GMP synthase C terminal domain AS588_00270 PF02540 NAD synthase AS588_00275 PF04542 Sigma-70 region 2 AS588_00275 PF08281 Sigma-70, region 4 AS588_00280 PF13786 Domain of unknown function (DUF4179) AS588_00285 PF00860 Permease family AS588_00295 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS588_00300 PF14044 AS588_00300 AS588_00305 PF00731 AIR carboxylase AS588_00310 PF02222 ATP-grasp domain AS588_00310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS588_00315 PF00206 Lyase AS588_00315 PF10397 Adenylosuccinate lyase C-terminus AS588_00320 PF01259 SAICAR synthetase AS588_00325 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AS588_00330 PF13507 CobB/CobQ-like glutamine amidotransferase domain AS588_00335 PF00586 AIR synthase related protein, N-terminal domain AS588_00335 PF02769 AIR synthase related protein, C-terminal domain AS588_00340 PF00156 Phosphoribosyl transferase domain AS588_00340 PF13522 Glutamine amidotransferase domain AS588_00345 PF00586 AIR synthase related protein, N-terminal domain AS588_00345 PF02769 AIR synthase related protein, C-terminal domain AS588_00350 PF00551 Formyl transferase AS588_00355 PF01808 AICARFT/IMPCHase bienzyme AS588_00355 PF02142 MGS-like domain AS588_00360 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AS588_00360 PF02843 Phosphoribosylglycinamide synthetase, C domain AS588_00360 PF02844 Phosphoribosylglycinamide synthetase, N domain AS588_00365 PF11127 Protein of unknown function (DUF2892) AS588_00370 PF01979 Amidohydrolase family AS588_00370 PF13382 Adenine deaminase C-terminal domain AS588_00375 PF11258 Protein of unknown function (DUF3048) AS588_00375 PF17479 AS588_00375 AS588_00380 PF01371 Trp repressor protein AS588_00385 PF01645 Conserved region in glutamate synthase AS588_00395 PF01884 PcrB family AS588_00400 PF00580 UvrD/REP helicase N-terminal domain AS588_00400 PF13361 UvrD-like helicase C-terminal domain AS588_00405 PF00533 BRCA1 C Terminus (BRCT) domain AS588_00405 PF01653 NAD-dependent DNA ligase adenylation domain AS588_00405 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AS588_00405 PF03120 NAD-dependent DNA ligase OB-fold domain AS588_00405 PF12826 Helix-hairpin-helix motif AS588_00405 PF14520 Helix-hairpin-helix domain AS588_00410 PF07537 CamS sex pheromone cAM373 precursor AS588_00415 PF01636 Phosphotransferase enzyme family AS588_00420 PF02308 AS588_00420 AS588_00425 PF00474 Sodium:solute symporter family AS588_00430 PF02686 Glu-tRNAGln amidotransferase C subunit AS588_00435 PF01425 Amidase AS588_00440 PF02637 GatB domain AS588_00440 PF02934 GatB/GatE catalytic domain AS588_00445 PF00440 Bacterial regulatory proteins, tetR family AS588_00450 PF00873 AcrB/AcrD/AcrF family AS588_00455 PF00781 Diacylglycerol kinase catalytic domain AS588_00460 PF01938 TRAM domain AS588_00460 PF05958 tRNA (Uracil-5-)-methyltransferase AS588_00470 PF00005 ABC transporter AS588_00475 PF01061 AS588_00475 AS588_00480 PF04634 Protein of unknown function, DUF600 AS588_00485 PF04740 AS588_00485 AS588_00485 PF13930 DNA/RNA non-specific endonuclease AS588_00495 PF01709 Transcriptional regulator AS588_00505 PF04439 Streptomycin adenylyltransferase AS588_00510 PF11007 AS588_00510 AS588_00515 PF12652 AS588_00515 AS588_00520 PF05067 Manganese containing catalase AS588_00525 PF00583 Acetyltransferase (GNAT) family AS588_00530 PF14150 AS588_00530 AS588_00535 PF04239 Protein of unknown function (DUF421) AS588_00540 PF03992 Antibiotic biosynthesis monooxygenase AS588_00545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS588_00550 PF01740 STAS domain AS588_00560 PF01027 Inhibitor of apoptosis-promoting Bax1 AS588_00565 PF01047 MarR family AS588_00570 PF01494 FAD binding domain AS588_00575 PF13037 AS588_00575 AS588_00575 PF13039 AS588_00575 AS588_00580 PF00067 Cytochrome P450 AS588_00580 PF00175 Oxidoreductase NAD-binding domain AS588_00580 PF00258 Flavodoxin AS588_00580 PF00667 FAD binding domain AS588_00590 PF00884 Sulfatase AS588_00595 PF00483 Nucleotidyl transferase AS588_00600 PF16363 AS588_00600 AS588_00605 PF03407 AS588_00605 AS588_00610 PF00535 Glycosyl transferase family 2 AS588_00620 PF07690 Major Facilitator Superfamily AS588_00625 PF13520 Amino acid permease AS588_00630 PF00171 Aldehyde dehydrogenase family AS588_00635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS588_00640 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_00645 PF00535 Glycosyl transferase family 2 AS588_00650 PF00005 ABC transporter AS588_00650 PF12848 ABC transporter AS588_00650 PF16326 AS588_00650 AS588_00655 PF13411 MerR HTH family regulatory protein AS588_00660 PF07690 Major Facilitator Superfamily AS588_00665 PF00005 ABC transporter AS588_00665 PF12848 ABC transporter AS588_00670 PF00270 DEAD/DEAH box helicase AS588_00670 PF00271 Helicase conserved C-terminal domain AS588_00680 PF00107 Zinc-binding dehydrogenase AS588_00680 PF16884 AS588_00680 AS588_00685 PF11486 Protein of unknown function (DUF3212) AS588_00690 PF11181 AS588_00690 AS588_00695 PF00544 Pectate lyase AS588_00700 PF00939 Sodium:sulfate symporter transmembrane region AS588_00705 PF01391 Collagen triple helix repeat (20 copies) AS588_00720 PF00072 Response regulator receiver domain AS588_00720 PF00512 His Kinase A (phospho-acceptor) domain AS588_00720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_00720 PF06580 AS588_00720 AS588_00720 PF07695 AS588_00720 AS588_00725 PF00072 Response regulator receiver domain AS588_00725 PF00486 Transcriptional regulatory protein, C terminal AS588_00730 PF00746 AS588_00730 AS588_00730 PF05737 Collagen binding domain AS588_00735 PF04203 Sortase family AS588_00740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_00740 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AS588_00740 PF17203 AS588_00740 AS588_00745 PF00072 Response regulator receiver domain AS588_00745 PF08279 HTH domain AS588_00750 PF03401 Tripartite tricarboxylate transporter family receptor AS588_00755 PF03600 Citrate transporter AS588_00760 PF00753 Metallo-beta-lactamase superfamily AS588_00765 PF02898 Nitric oxide synthase, oxygenase domain AS588_00770 PF00708 Acylphosphatase AS588_00775 PF03473 MOSC domain AS588_00775 PF03475 3-alpha domain AS588_00780 PF11588 Protein of unknown function (DUF3243) AS588_00785 PF00557 Metallopeptidase family M24 AS588_00790 PF00367 phosphotransferase system, EIIB AS588_00790 PF02378 Phosphotransferase system, EIIC AS588_00795 PF10787 AS588_00795 AS588_00800 PF00884 Sulfatase AS588_00805 PF09350 AS588_00805 AS588_00810 PF00011 Hsp20/alpha crystallin family AS588_00815 PF10676 AS588_00815 AS588_00820 PF10676 AS588_00820 AS588_00830 PF00128 Alpha amylase, catalytic domain AS588_00830 PF16657 AS588_00830 AS588_00835 PF00392 Bacterial regulatory proteins, gntR family AS588_00835 PF07702 UTRA domain AS588_00840 PF00881 Nitroreductase family AS588_00845 PF07907 AS588_00845 AS588_00850 PF07907 AS588_00850 AS588_00855 PF00149 Calcineurin-like phosphoesterase AS588_00855 PF02872 5'-nucleotidase, C-terminal domain AS588_00860 PF01965 DJ-1/PfpI family AS588_00865 PF00356 Bacterial regulatory proteins, lacI family AS588_00865 PF13377 Periplasmic binding protein-like domain AS588_00870 PF08501 Shikimate dehydrogenase substrate binding domain AS588_00875 PF01487 Type I 3-dehydroquinase AS588_00880 PF07690 Major Facilitator Superfamily AS588_00885 PF06569 AS588_00885 AS588_00890 PF01451 Low molecular weight phosphotyrosine protein phosphatase AS588_00900 PF03631 AS588_00900 AS588_00905 PF07690 Major Facilitator Superfamily AS588_00910 PF01699 Sodium/calcium exchanger protein AS588_00915 PF14167 AS588_00915 AS588_00920 PF00924 Mechanosensitive ion channel AS588_00925 PF04055 Radical SAM superfamily AS588_00925 PF08756 AS588_00925 AS588_00925 PF13353 4Fe-4S single cluster domain AS588_00935 PF01522 Polysaccharide deacetylase AS588_00940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS588_00940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AS588_00950 PF01544 CorA-like Mg2+ transporter protein AS588_00955 PF00730 HhH-GPD superfamily base excision DNA repair protein AS588_00960 PF01938 TRAM domain AS588_00960 PF05958 tRNA (Uracil-5-)-methyltransferase AS588_00965 PF14118 AS588_00965 AS588_00970 PF01207 Dihydrouridine synthase (Dus) AS588_00980 PF00676 Dehydrogenase E1 component AS588_00985 PF02779 Transketolase, pyrimidine binding domain AS588_00985 PF02780 Transketolase, C-terminal domain AS588_00990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS588_00990 PF00364 Biotin-requiring enzyme AS588_00990 PF02817 e3 binding domain AS588_00995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS588_00995 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS588_01000 PF00158 Sigma-54 interaction domain AS588_01000 PF01590 GAF domain AS588_01000 PF02954 Bacterial regulatory protein, Fis family AS588_01005 PF08141 AS588_01005 AS588_01010 PF02056 Family 4 glycosyl hydrolase AS588_01010 PF11975 Family 4 glycosyl hydrolase C-terminal domain AS588_01015 PF01380 SIS domain AS588_01015 PF01418 Helix-turn-helix domain, rpiR family AS588_01020 PF00367 phosphotransferase system, EIIB AS588_01020 PF02378 Phosphotransferase system, EIIC AS588_01030 PF00005 ABC transporter AS588_01030 PF00664 ABC transporter transmembrane region AS588_01035 PF07681 AS588_01035 AS588_01040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS588_01045 PF01040 UbiA prenyltransferase family AS588_01050 PF03551 Transcriptional regulator PadR-like family AS588_01050 PF10400 Virulence activator alpha C-term AS588_01055 PF02525 Flavodoxin-like fold AS588_01060 PF01757 AS588_01060 AS588_01065 PF00391 PEP-utilising enzyme, mobile domain AS588_01065 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AS588_01070 PF01337 Barstar (barnase inhibitor) AS588_01075 PF12867 DinB superfamily AS588_01080 PF07690 Major Facilitator Superfamily AS588_01085 PF01047 MarR family AS588_01090 PF03706 AS588_01090 AS588_01090 PF09924 Uncharacterized conserved protein (DUF2156) AS588_01095 PF02567 Phenazine biosynthesis-like protein AS588_01100 PF00881 Nitroreductase family AS588_01105 PF14151 AS588_01105 AS588_01110 PF01370 NAD dependent epimerase/dehydratase family AS588_01110 PF08338 Domain of unknown function (DUF1731) AS588_01115 PF02631 RecX family AS588_01120 PF08838 Protein of unknown function (DUF1811) AS588_01125 PF07690 Major Facilitator Superfamily AS588_01130 PF10794 AS588_01130 AS588_01135 PF00089 Trypsin AS588_01140 PF08176 AS588_01140 AS588_01145 PF14043 AS588_01145 AS588_01150 PF08239 Bacterial SH3 domain AS588_01155 PF13630 AS588_01155 AS588_01160 PF12697 Alpha/beta hydrolase family AS588_01165 PF00535 Glycosyl transferase family 2 AS588_01170 PF09586 AS588_01170 AS588_01175 PF04307 AS588_01175 AS588_01180 PF00730 HhH-GPD superfamily base excision DNA repair protein AS588_01180 PF14815 NUDIX domain AS588_01190 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_01195 PF04259 AS588_01195 AS588_01200 PF14182 AS588_01200 AS588_01205 PF04167 Protein of unknown function (DUF402) AS588_01210 PF00005 ABC transporter AS588_01210 PF00664 ABC transporter transmembrane region AS588_01215 PF06081 AS588_01215 AS588_01220 PF00202 Aminotransferase class-III AS588_01225 PF00578 AhpC/TSA family AS588_01230 PF01475 Ferric uptake regulator family AS588_01235 PF11023 AS588_01235 AS588_01240 PF14540 Nucleotidyltransferase-like AS588_01365 PF03073 TspO/MBR family AS588_01370 PF01258 Prokaryotic dksA/traR C4-type zinc finger AS588_01375 PF00425 chorismate binding enzyme AS588_01380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS588_01380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS588_01380 PF16582 AS588_01380 AS588_01385 PF00561 alpha/beta hydrolase fold AS588_01390 PF00378 Enoyl-CoA hydratase/isomerase family AS588_01395 PF00501 AMP-binding enzyme AS588_01395 PF13193 AMP-binding enzyme C-terminal domain AS588_01400 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AS588_01400 PF13378 Enolase C-terminal domain-like AS588_01410 PF02322 AS588_01410 AS588_01415 PF01654 AS588_01415 AS588_01420 PF01197 Ribosomal protein L31 AS588_01425 PF00484 Carbonic anhydrase AS588_01430 PF01809 AS588_01430 AS588_01435 PF02664 S-Ribosylhomocysteinase (LuxS) AS588_01440 PF13115 AS588_01440 AS588_01450 PF00210 Ferritin-like domain AS588_01455 PF05105 AS588_01455 AS588_01460 PF00293 NUDIX domain AS588_01465 PF00528 Binding-protein-dependent transport system inner membrane component AS588_01470 PF00005 ABC transporter AS588_01475 PF13379 NMT1-like family AS588_01480 PF00326 Prolyl oligopeptidase family AS588_01485 PF10763 Protein of unknown function (DUF2584) AS588_01490 PF01293 Phosphoenolpyruvate carboxykinase AS588_01495 PF00438 S-adenosylmethionine synthetase, N-terminal domain AS588_01495 PF02772 S-adenosylmethionine synthetase, central domain AS588_01495 PF02773 S-adenosylmethionine synthetase, C-terminal domain AS588_01500 PF00733 Asparagine synthase AS588_01500 PF13537 Glutamine amidotransferase domain AS588_01505 PF00324 Amino acid permease AS588_01510 PF00132 Bacterial transferase hexapeptide (six repeats) AS588_01515 PF12146 Putative lysophospholipase AS588_01520 PF10776 AS588_01520 AS588_01525 PF03009 Glycerophosphoryl diester phosphodiesterase family AS588_01535 PF06962 Putative rRNA methylase AS588_01540 PF04055 Radical SAM superfamily AS588_01540 PF16199 AS588_01540 AS588_01545 PF10732 AS588_01545 AS588_01550 PF00392 Bacterial regulatory proteins, gntR family AS588_01555 PF00005 ABC transporter AS588_01560 PF12679 AS588_01560 AS588_01565 PF12730 AS588_01565 AS588_01575 PF00005 ABC transporter AS588_01580 PF02687 AS588_01580 AS588_01580 PF12704 MacB-like periplasmic core domain AS588_01585 PF00072 Response regulator receiver domain AS588_01585 PF00486 Transcriptional regulatory protein, C terminal AS588_01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_01595 PF00005 ABC transporter AS588_01605 PF09529 AS588_01605 AS588_01610 PF07690 Major Facilitator Superfamily AS588_01615 PF01740 STAS domain AS588_01615 PF13426 PAS domain AS588_01620 PF14074 AS588_01620 AS588_01625 PF00133 tRNA synthetases class I (I, L, M and V) AS588_01625 PF08264 Anticodon-binding domain of tRNA AS588_01625 PF09334 tRNA synthetases class I (M) AS588_01625 PF13603 Leucyl-tRNA synthetase, Domain 2 AS588_01630 PF00581 Rhodanese-like domain AS588_01635 PF00583 Acetyltransferase (GNAT) family AS588_01640 PF02056 Family 4 glycosyl hydrolase AS588_01640 PF11975 Family 4 glycosyl hydrolase C-terminal domain AS588_01645 PF00528 Binding-protein-dependent transport system inner membrane component AS588_01650 PF00528 Binding-protein-dependent transport system inner membrane component AS588_01655 PF01547 Bacterial extracellular solute-binding protein AS588_01660 PF00356 Bacterial regulatory proteins, lacI family AS588_01660 PF13377 Periplasmic binding protein-like domain AS588_01665 PF10957 AS588_01665 AS588_01670 PF02028 BCCT family transporter AS588_01675 PF03486 HI0933-like protein AS588_01680 PF01943 AS588_01680 AS588_01680 PF14667 Polysaccharide biosynthesis C-terminal domain AS588_01685 PF00849 RNA pseudouridylate synthase AS588_01685 PF01479 S4 domain AS588_01690 PF08220 DeoR-like helix-turn-helix domain AS588_01695 PF00005 ABC transporter AS588_01700 PF05975 AS588_01700 AS588_01705 PF00860 Permease family AS588_01710 PF01546 Peptidase family M20/M25/M40 AS588_01715 PF00291 Pyridoxal-phosphate dependent enzyme AS588_01720 PF13563 2'-5' RNA ligase superfamily AS588_01730 PF00781 Diacylglycerol kinase catalytic domain AS588_01735 PF01636 Phosphotransferase enzyme family AS588_01740 PF14165 AS588_01740 AS588_01745 PF02390 Putative methyltransferase AS588_01750 PF00753 Metallo-beta-lactamase superfamily AS588_01755 PF00390 Malic enzyme, N-terminal domain AS588_01755 PF03949 Malic enzyme, NAD binding domain AS588_01760 PF03413 Peptidase propeptide and YPEB domain AS588_01765 PF05343 M42 glutamyl aminopeptidase AS588_01770 PF11071 AS588_01770 AS588_01775 PF00085 Thioredoxin AS588_01780 PF07285 AS588_01780 AS588_01785 PF01588 Putative tRNA binding domain AS588_01785 PF14794 Domain of unknown function (DUF4479) AS588_01790 PF01580 FtsK/SpoIIIE family AS588_01790 PF09397 Ftsk gamma domain AS588_01795 PF01225 Mur ligase family, catalytic domain AS588_01795 PF02875 Mur ligase family, glutamate ligase domain AS588_01795 PF08245 Mur ligase middle domain AS588_01800 PF06103 AS588_01800 AS588_01805 PF12732 AS588_01805 AS588_01810 PF11009 Protein of unknown function (DUF2847) AS588_01815 PF00793 DAHP synthetase I family AS588_01815 PF01817 Chorismate mutase type II AS588_01820 PF00356 Bacterial regulatory proteins, lacI family AS588_01820 PF13377 Periplasmic binding protein-like domain AS588_01825 PF01618 AS588_01825 AS588_01830 PF00691 OmpA family AS588_01830 PF13677 AS588_01830 AS588_01835 PF00850 Histone deacetylase domain AS588_01840 PF00571 CBS domain AS588_01845 PF00583 Acetyltransferase (GNAT) family AS588_01850 PF00501 AMP-binding enzyme AS588_01850 PF13193 AMP-binding enzyme C-terminal domain AS588_01855 PF00579 tRNA synthetases class I (W and Y) AS588_01855 PF01479 S4 domain AS588_01860 PF05437 AS588_01860 AS588_01865 PF03591 AS588_01865 AS588_01870 PF01978 Sugar-specific transcriptional regulator TrmB AS588_01870 PF11495 Archaeal transcriptional regulator TrmB AS588_01875 PF01545 Cation efflux family AS588_01875 PF16916 AS588_01875 AS588_01885 PF13472 GDSL-like Lipase/Acylhydrolase family AS588_01890 PF01965 DJ-1/PfpI family AS588_01900 PF00042 Globin AS588_01900 PF00175 Oxidoreductase NAD-binding domain AS588_01900 PF00970 Oxidoreductase FAD-binding domain AS588_01905 PF09346 SMI1 / KNR4 family (SUKH-1) AS588_01910 PF00171 Aldehyde dehydrogenase family AS588_01915 PF00163 Ribosomal protein S4/S9 N-terminal domain AS588_01915 PF01479 S4 domain AS588_01920 PF00990 GGDEF domain AS588_01925 PF13185 GAF domain AS588_01930 PF00440 Bacterial regulatory proteins, tetR family AS588_01935 PF02811 PHP domain AS588_01935 PF13263 PHP-associated AS588_01940 PF06160 AS588_01940 AS588_01945 PF05525 AS588_01945 AS588_01950 PF00266 Aminotransferase class-V AS588_01955 PF02568 Thiamine biosynthesis protein (ThiI) AS588_01955 PF02926 THUMP domain AS588_01960 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS588_01965 PF00501 AMP-binding enzyme AS588_01965 PF13193 AMP-binding enzyme C-terminal domain AS588_01970 PF07969 Amidohydrolase family AS588_01975 PF01513 ATP-NAD kinase AS588_01980 PF01343 Peptidase family S49 AS588_01985 PF06271 AS588_01985 AS588_01990 PF11167 AS588_01990 AS588_01995 PF09579 AS588_01995 AS588_02000 PF08534 Redoxin AS588_02005 PF02384 N-6 DNA Methylase AS588_02010 PF00871 Acetokinase family AS588_02015 PF00994 Probable molybdopterin binding domain AS588_02020 PF00764 Arginosuccinate synthase AS588_02025 PF00206 Lyase AS588_02025 PF14698 Argininosuccinate lyase C-terminal AS588_02030 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_02035 PF13483 Beta-lactamase superfamily domain AS588_02040 PF00392 Bacterial regulatory proteins, gntR family AS588_02040 PF00571 CBS domain AS588_02040 PF03061 Thioesterase superfamily AS588_02040 PF07085 DRTGG domain AS588_02045 PF14007 AS588_02045 AS588_02050 PF01368 DHH family AS588_02050 PF02272 DHHA1 domain AS588_02065 PF14034 AS588_02065 AS588_02070 PF01336 OB-fold nucleic acid binding domain AS588_02070 PF02811 PHP domain AS588_02070 PF07733 Bacterial DNA polymerase III alpha subunit AS588_02070 PF14579 Helix-hairpin-helix motif AS588_02075 PF00390 Malic enzyme, N-terminal domain AS588_02075 PF03949 Malic enzyme, NAD binding domain AS588_02085 PF01039 Carboxyl transferase domain AS588_02090 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AS588_02095 PF00365 Phosphofructokinase AS588_02100 PF00224 Pyruvate kinase, barrel domain AS588_02100 PF00391 PEP-utilising enzyme, mobile domain AS588_02100 PF02887 Pyruvate kinase, alpha/beta domain AS588_02105 PF04186 AS588_02105 AS588_02110 PF01594 AS588_02110 AS588_02115 PF04284 AS588_02115 AS588_02120 PF11208 AS588_02120 AS588_02125 PF00285 Citrate synthase AS588_02130 PF00180 Isocitrate/isopropylmalate dehydrogenase AS588_02135 PF00056 lactate/malate dehydrogenase, NAD binding domain AS588_02135 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AS588_02140 PF00072 Response regulator receiver domain AS588_02140 PF00486 Transcriptional regulatory protein, C terminal AS588_02145 PF00512 His Kinase A (phospho-acceptor) domain AS588_02145 PF00989 PAS fold AS588_02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_02145 PF16736 AS588_02145 AS588_02150 PF00476 DNA polymerase family A AS588_02150 PF01367 5'-3' exonuclease, C-terminal SAM fold AS588_02150 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AS588_02155 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AS588_02155 PF06827 Zinc finger found in FPG and IleRS AS588_02155 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AS588_02160 PF02659 AS588_02160 AS588_02165 PF01121 Dephospho-CoA kinase AS588_02170 PF00248 Aldo/keto reductase family AS588_02175 PF07690 Major Facilitator Superfamily AS588_02180 PF01638 HxlR-like helix-turn-helix AS588_02185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS588_02185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AS588_02190 PF02675 S-adenosylmethionine decarboxylase AS588_02195 PF03477 ATP cone domain AS588_02200 PF07261 Replication initiation and membrane attachment AS588_02205 PF01695 IstB-like ATP binding protein AS588_02205 PF07319 Primosomal protein DnaI N-terminus AS588_02210 PF09335 AS588_02210 AS588_02215 PF08812 AS588_02215 AS588_02220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS588_02220 PF02824 TGS domain AS588_02220 PF03129 Anticodon binding domain AS588_02220 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS588_02225 PF13419 Haloacid dehalogenase-like hydrolase AS588_02230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_02230 PF06580 AS588_02230 AS588_02230 PF07694 5TMR of 5TMR-LYT AS588_02230 PF13492 GAF domain AS588_02235 PF00072 Response regulator receiver domain AS588_02235 PF04397 LytTr DNA-binding domain AS588_02240 PF03788 AS588_02240 AS588_02245 PF04172 AS588_02245 AS588_02250 PF00707 Translation initiation factor IF-3, C-terminal domain AS588_02250 PF05198 Translation initiation factor IF-3, N-terminal domain AS588_02255 PF01632 Ribosomal protein L35 AS588_02260 PF00453 Ribosomal protein L20 AS588_02265 PF06961 AS588_02265 AS588_02275 PF05343 M42 glutamyl aminopeptidase AS588_02280 PF04616 Glycosyl hydrolases family 43 AS588_02285 PF02610 L-arabinose isomerase AS588_02285 PF11762 L-arabinose isomerase C-terminal domain AS588_02290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS588_02290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS588_02295 PF00596 Class II Aldolase and Adducin N-terminal domain AS588_02300 PF13242 HAD-hyrolase-like AS588_02300 PF13344 Haloacid dehalogenase-like hydrolase AS588_02305 PF13685 Iron-containing alcohol dehydrogenase AS588_02310 PF01547 Bacterial extracellular solute-binding protein AS588_02315 PF00528 Binding-protein-dependent transport system inner membrane component AS588_02320 PF00528 Binding-protein-dependent transport system inner membrane component AS588_02325 PF06964 Alpha-L-arabinofuranosidase C-terminus AS588_02330 PF02554 AS588_02330 AS588_02330 PF13722 AS588_02330 AS588_02335 PF02754 AS588_02335 AS588_02335 PF13183 4Fe-4S dicluster domain AS588_02340 PF01565 FAD binding domain AS588_02340 PF02913 FAD linked oxidases, C-terminal domain AS588_02345 PF05651 AS588_02345 AS588_02345 PF13556 PucR C-terminal helix-turn-helix domain AS588_02350 PF14098 AS588_02350 AS588_02355 PF00588 SpoU rRNA Methylase family AS588_02355 PF08032 RNA 2'-O ribose methyltransferase substrate binding AS588_02360 PF01409 tRNA synthetases class II core domain (F) AS588_02360 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AS588_02365 PF01588 Putative tRNA binding domain AS588_02365 PF03147 Ferredoxin-fold anticodon binding domain AS588_02365 PF03483 B3/4 domain AS588_02365 PF03484 tRNA synthetase B5 domain AS588_02370 PF01351 Ribonuclease HII AS588_02370 PF11858 Domain of unknown function (DUF3378) AS588_02375 PF05164 Cell division protein ZapA AS588_02380 PF02674 AS588_02380 AS588_02385 PF02811 PHP domain AS588_02385 PF14520 Helix-hairpin-helix domain AS588_02385 PF14716 Helix-hairpin-helix domain AS588_02385 PF14791 DNA polymerase beta thumb AS588_02390 PF00488 MutS domain V AS588_02390 PF01713 Smr domain AS588_02390 PF05192 MutS domain III AS588_02395 PF03994 AS588_02395 AS588_02400 PF10924 AS588_02400 AS588_02405 PF00501 AMP-binding enzyme AS588_02405 PF13193 AMP-binding enzyme C-terminal domain AS588_02410 PF00440 Bacterial regulatory proteins, tetR family AS588_02410 PF08359 YsiA-like protein, C-terminal region AS588_02415 PF00378 Enoyl-CoA hydratase/isomerase family AS588_02420 PF01012 Electron transfer flavoprotein domain AS588_02425 PF00766 Electron transfer flavoprotein FAD-binding domain AS588_02425 PF01012 Electron transfer flavoprotein domain AS588_02430 PF06964 Alpha-L-arabinofuranosidase C-terminus AS588_02435 PF00085 Thioredoxin AS588_02440 PF01541 GIY-YIG catalytic domain AS588_02440 PF02151 UvrB/uvrC motif AS588_02440 PF08459 UvrC Helix-hairpin-helix N-terminal AS588_02445 PF00696 Amino acid kinase family AS588_02445 PF01842 ACT domain AS588_02445 PF13840 ACT domain AS588_02450 PF10702 Protein of unknown function (DUF2507) AS588_02455 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AS588_02460 PF00890 FAD binding domain AS588_02460 PF02910 Fumarate reductase flavoprotein C-term AS588_02465 PF13085 2Fe-2S iron-sulfur cluster binding domain AS588_02465 PF13183 4Fe-4S dicluster domain AS588_02470 PF03061 Thioesterase superfamily AS588_02475 PF00196 Bacterial regulatory proteins, luxR family AS588_02480 PF01047 MarR family AS588_02485 PF01177 Asp/Glu/Hydantoin racemase AS588_02490 PF10646 AS588_02490 AS588_02495 PF01138 3' exoribonuclease family, domain 1 AS588_02495 PF03725 3' exoribonuclease family, domain 2 AS588_02500 PF01725 Ham1 family AS588_02505 PF12850 Calcineurin-like phosphoesterase superfamily domain AS588_02530 PF00205 Thiamine pyrophosphate enzyme, central domain AS588_02530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS588_02530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS588_02535 PF01842 ACT domain AS588_02535 PF10369 Small subunit of acetolactate synthase AS588_02540 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AS588_02540 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AS588_02545 PF00682 HMGL-like AS588_02545 PF08502 LeuA allosteric (dimerisation) domain AS588_02550 PF00180 Isocitrate/isopropylmalate dehydrogenase AS588_02555 PF00330 Aconitase family (aconitate hydratase) AS588_02560 PF00694 Aconitase C-terminal domain AS588_02565 PF14559 Tetratricopeptide repeat AS588_02570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS588_02570 PF05697 Bacterial trigger factor protein (TF) AS588_02570 PF05698 Bacterial trigger factor protein (TF) C-terminus AS588_02575 PF06689 ClpX C4-type zinc finger AS588_02575 PF07724 AAA domain (Cdc48 subfamily) AS588_02575 PF10431 C-terminal, D2-small domain, of ClpB protein AS588_02580 PF00004 ATPase family associated with various cellular activities (AAA) AS588_02580 PF05362 Lon protease (S16) C-terminal proteolytic domain AS588_02585 PF00004 ATPase family associated with various cellular activities (AAA) AS588_02585 PF02190 ATP-dependent protease La (LON) domain AS588_02585 PF05362 Lon protease (S16) C-terminal proteolytic domain AS588_02590 PF01926 50S ribosome-binding GTPase AS588_02600 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AS588_02600 PF01488 Shikimate / quinate 5-dehydrogenase AS588_02600 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AS588_02605 PF01578 AS588_02605 AS588_02610 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AS588_02610 PF03900 Porphobilinogen deaminase, C-terminal domain AS588_02615 PF02602 Uroporphyrinogen-III synthase HemD AS588_02620 PF00490 Delta-aminolevulinic acid dehydratase AS588_02625 PF00202 Aminotransferase class-III AS588_02630 PF01476 LysM domain AS588_02645 PF00133 tRNA synthetases class I (I, L, M and V) AS588_02645 PF08264 Anticodon-binding domain of tRNA AS588_02645 PF10458 Valyl tRNA synthetase tRNA binding arm AS588_02650 PF02875 Mur ligase family, glutamate ligase domain AS588_02650 PF08245 Mur ligase middle domain AS588_02655 PF01478 Type IV leader peptidase family AS588_02655 PF06750 AS588_02655 AS588_02660 PF05036 Sporulation related domain AS588_02665 PF02545 Maf-like protein AS588_02670 PF04002 RadC-like JAB domain AS588_02675 PF06723 MreB/Mbl protein AS588_02680 PF04085 rod shape-determining protein MreC AS588_02685 PF04093 AS588_02685 AS588_02690 PF03775 Septum formation inhibitor MinC, C-terminal domain AS588_02695 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AS588_02700 PF01551 Peptidase family M23 AS588_02705 PF02163 Peptidase family M50 AS588_02710 PF00829 Ribosomal prokaryotic L21 protein AS588_02715 PF04327 Protein of unknown function (DUF464) AS588_02720 PF01016 Ribosomal L27 protein AS588_02725 PF14682 Sporulation initiation phospho-transferase B, C-terminal AS588_02725 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AS588_02730 PF01018 GTP1/OBG AS588_02730 PF01926 50S ribosome-binding GTPase AS588_02730 PF09269 Domain of unknown function (DUF1967) AS588_02735 PF01842 ACT domain AS588_02740 PF00800 Prephenate dehydratase AS588_02745 PF02829 3H domain AS588_02745 PF08279 HTH domain AS588_02750 PF00266 Aminotransferase class-V AS588_02755 PF00890 FAD binding domain AS588_02755 PF02910 Fumarate reductase flavoprotein C-term AS588_02760 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AS588_02760 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AS588_02765 PF02445 Quinolinate synthetase A protein AS588_02770 PF01476 LysM domain AS588_02775 PF09580 AS588_02775 AS588_02785 PF08955 BofC C-terminal domain AS588_02785 PF08977 Bypass of Forespore C, N terminal AS588_02790 PF01330 RuvA N terminal domain AS588_02790 PF07499 RuvA, C-terminal domain AS588_02790 PF14520 Helix-hairpin-helix domain AS588_02795 PF05491 Holliday junction DNA helicase ruvB C-terminus AS588_02795 PF05496 Holliday junction DNA helicase ruvB N-terminus AS588_02800 PF11146 AS588_02800 AS588_02805 PF02547 Queuosine biosynthesis protein AS588_02810 PF01702 Queuine tRNA-ribosyltransferase AS588_02815 PF02699 Preprotein translocase subunit AS588_02820 PF12670 AS588_02820 AS588_02825 PF04239 Protein of unknown function (DUF421) AS588_02830 PF01943 AS588_02830 AS588_02830 PF14667 Polysaccharide biosynthesis C-terminal domain AS588_02835 PF13797 AS588_02835 AS588_02840 PF02355 Protein export membrane protein AS588_02840 PF07549 SecD/SecF GG Motif AS588_02845 PF02080 TrkA-C domain AS588_02850 PF06305 AS588_02850 AS588_02855 PF01368 DHH family AS588_02855 PF02272 DHHA1 domain AS588_02855 PF10141 AS588_02855 AS588_02860 PF00156 Phosphoribosyl transferase domain AS588_02865 PF02824 TGS domain AS588_02865 PF04607 Region found in RelA / SpoT proteins AS588_02865 PF13291 ACT domain AS588_02865 PF13328 HD domain AS588_02870 PF02580 D-Tyr-tRNA(Tyr) deacylase AS588_02875 PF01520 N-acetylmuramoyl-L-alanine amidase AS588_02875 PF08239 Bacterial SH3 domain AS588_02880 PF03129 Anticodon binding domain AS588_02880 PF13393 Histidyl-tRNA synthetase AS588_02885 PF00152 tRNA synthetases class II (D, K and N) AS588_02885 PF01336 OB-fold nucleic acid binding domain AS588_02885 PF02938 GAD domain AS588_02895 PF00899 ThiF family AS588_02900 PF03215 Rad17 cell cycle checkpoint protein AS588_02900 PF05496 Holliday junction DNA helicase ruvB N-terminus AS588_02900 PF12002 MgsA AAA+ ATPase C terminal AS588_02900 PF16193 AS588_02900 AS588_02905 PF02082 Transcriptional regulator AS588_02910 PF00266 Aminotransferase class-V AS588_02915 PF03054 tRNA methyl transferase AS588_02920 PF13181 Tetratricopeptide repeat AS588_02920 PF13432 Tetratricopeptide repeat AS588_02920 PF14559 Tetratricopeptide repeat AS588_02925 PF13538 UvrD-like helicase C-terminal domain AS588_02925 PF13604 AAA domain AS588_02925 PF14490 Helix-hairpin-helix containing domain AS588_02930 PF05239 PRC-barrel domain AS588_02940 PF00528 Binding-protein-dependent transport system inner membrane component AS588_02945 PF00528 Binding-protein-dependent transport system inner membrane component AS588_02950 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS588_02955 PF00005 ABC transporter AS588_02960 PF01594 AS588_02960 AS588_02965 PF01411 tRNA synthetases class II (A) AS588_02965 PF02272 DHHA1 domain AS588_02965 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS588_02970 PF06135 AS588_02970 AS588_02975 PF03652 Uncharacterised protein family (UPF0081) AS588_02980 PF06949 AS588_02980 AS588_02985 PF02618 YceG-like family AS588_02990 PF01596 O-methyltransferase AS588_02995 PF01136 AS588_02995 AS588_03000 PF01136 AS588_03000 AS588_03000 PF16325 AS588_03000 AS588_03005 PF00485 Phosphoribulokinase / Uridine kinase family AS588_03010 PF00589 Phage integrase family AS588_03010 PF14657 AS588_03010 AS588_03010 PF14659 Phage integrase, N-terminal SAM-like domain AS588_03030 PF01381 Helix-turn-helix AS588_03040 PF09524 AS588_03040 AS588_03045 PF01695 IstB-like ATP binding protein AS588_03055 PF17356 AS588_03055 AS588_03080 PF00145 C-5 cytosine-specific DNA methylase AS588_03085 PF02086 D12 class N6 adenine-specific DNA methyltransferase AS588_03095 PF08761 dUTPase AS588_03110 PF08281 Sigma-70, region 4 AS588_03120 PF00589 Phage integrase family AS588_03125 PF13365 Trypsin-like peptidase domain AS588_03145 PF05119 AS588_03145 AS588_03150 PF03354 AS588_03150 AS588_03155 PF04860 Phage portal protein AS588_03160 PF04586 AS588_03160 AS588_03165 PF05065 Phage capsid family AS588_03175 PF05135 Phage gp6-like head-tail connector protein AS588_03180 PF05521 Phage head-tail joining protein AS588_03185 PF04883 AS588_03185 AS588_03190 PF11367 Protein of unknown function (DUF3168) AS588_03195 PF04630 AS588_03195 AS588_03205 PF01464 Transglycosylase SLT domain AS588_03205 PF10145 AS588_03205 AS588_03210 PF05709 Phage tail protein AS588_03215 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AS588_03215 PF06605 Prophage endopeptidase tail AS588_03220 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain AS588_03220 PF12708 Pectate lyase superfamily protein AS588_03225 PF10651 Domain of unknown function (DUF2479) AS588_03235 PF09693 AS588_03235 AS588_03240 PF05105 AS588_03240 AS588_03245 PF01510 N-acetylmuramoyl-L-alanine amidase AS588_03265 PF01272 Transcription elongation factor, GreA/GreB, C-term AS588_03265 PF03449 Transcription elongation factor, N-terminal AS588_03270 PF00905 Penicillin binding protein transpeptidase domain AS588_03270 PF03717 Penicillin-binding Protein dimerisation domain AS588_03275 PF07423 AS588_03275 AS588_03280 PF10750 AS588_03280 AS588_03285 PF13649 Methyltransferase domain AS588_03290 PF01048 Phosphorylase superfamily AS588_03295 PF00291 Pyridoxal-phosphate dependent enzyme AS588_03300 PF01053 Cys/Met metabolism PLP-dependent enzyme AS588_03305 PF14143 AS588_03305 AS588_03310 PF07849 AS588_03310 AS588_03315 PF00384 Molybdopterin oxidoreductase AS588_03315 PF01568 Molydopterin dinucleotide binding domain AS588_03315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS588_03315 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS588_03315 PF12838 4Fe-4S dicluster domain AS588_03315 PF13510 2Fe-2S iron-sulfur cluster binding domain AS588_03320 PF10057 AS588_03320 AS588_03325 PF01226 Formate/nitrite transporter AS588_03335 PF08241 Methyltransferase domain AS588_03340 PF00440 Bacterial regulatory proteins, tetR family AS588_03340 PF16295 AS588_03340 AS588_03345 PF00067 Cytochrome P450 AS588_03345 PF00175 Oxidoreductase NAD-binding domain AS588_03345 PF00258 Flavodoxin AS588_03345 PF00667 FAD binding domain AS588_03350 PF07690 Major Facilitator Superfamily AS588_03355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_03355 PF03466 LysR substrate binding domain AS588_03360 PF04073 Aminoacyl-tRNA editing domain AS588_03365 PF12706 Beta-lactamase superfamily domain AS588_03370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS588_03370 PF00874 PRD domain AS588_03370 PF05043 Mga helix-turn-helix domain AS588_03370 PF08279 HTH domain AS588_03375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS588_03375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS588_03375 PF02378 Phosphotransferase system, EIIC AS588_03380 PF01238 Phosphomannose isomerase type I AS588_03385 PF01380 SIS domain AS588_03385 PF01418 Helix-turn-helix domain, rpiR family AS588_03390 PF08282 haloacid dehalogenase-like hydrolase AS588_03395 PF08282 haloacid dehalogenase-like hydrolase AS588_03400 PF10852 AS588_03400 AS588_03405 PF05163 DinB family AS588_03410 PF00583 Acetyltransferase (GNAT) family AS588_03415 PF07690 Major Facilitator Superfamily AS588_03420 PF13238 AAA domain AS588_03425 PF06445 GyrI-like small molecule binding domain AS588_03425 PF12833 Helix-turn-helix domain AS588_03430 PF03551 Transcriptional regulator PadR-like family AS588_03435 PF03629 Domain of unknown function (DUF303) AS588_03440 PF04542 Sigma-70 region 2 AS588_03440 PF04545 Sigma-70, region 4 AS588_03445 PF07690 Major Facilitator Superfamily AS588_03450 PF09335 AS588_03450 AS588_03455 PF01522 Polysaccharide deacetylase AS588_03460 PF13472 GDSL-like Lipase/Acylhydrolase family AS588_03465 PF08970 Sporulation inhibitor A AS588_03470 PF08282 haloacid dehalogenase-like hydrolase AS588_03470 PF13242 HAD-hyrolase-like AS588_03475 PF01926 50S ribosome-binding GTPase AS588_03480 PF01488 Shikimate / quinate 5-dehydrogenase AS588_03480 PF08501 Shikimate dehydrogenase substrate binding domain AS588_03485 PF01985 CRS1 / YhbY (CRM) domain AS588_03490 PF01467 Cytidylyltransferase AS588_03495 PF01966 HD domain AS588_03500 PF02410 Oligomerisation domain AS588_03505 PF13649 Methyltransferase domain AS588_03510 PF03807 NADP oxidoreductase coenzyme F420-dependent AS588_03510 PF14748 Pyrroline-5-carboxylate reductase dimerisation AS588_03515 PF10531 SLBB domain AS588_03515 PF12836 Helix-hairpin-helix motif AS588_03520 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS588_03525 PF00753 Metallo-beta-lactamase superfamily AS588_03525 PF03772 AS588_03525 AS588_03525 PF13567 AS588_03525 AS588_03530 PF06144 DNA polymerase III, delta subunit AS588_03535 PF01649 Ribosomal protein S20 AS588_03540 PF03418 Germination protease AS588_03545 PF07454 AS588_03545 AS588_03550 PF12438 AS588_03550 AS588_03555 PF00009 Elongation factor Tu GTP binding domain AS588_03555 PF00679 Elongation factor G C-terminus AS588_03555 PF03144 Elongation factor Tu domain 2 AS588_03555 PF06421 GTP-binding protein LepA C-terminus AS588_03560 PF04055 Radical SAM superfamily AS588_03560 PF06969 HemN C-terminal domain AS588_03565 PF01628 HrcA protein C terminal domain AS588_03570 PF01025 GrpE AS588_03575 PF00012 Hsp70 protein AS588_03580 PF00226 DnaJ domain AS588_03580 PF00684 DnaJ central domain AS588_03580 PF01556 DnaJ C terminal domain AS588_03585 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AS588_03590 PF04452 RNA methyltransferase AS588_03595 PF00919 Uncharacterized protein family UPF0004 AS588_03595 PF01938 TRAM domain AS588_03595 PF04055 Radical SAM superfamily AS588_03600 PF02690 AS588_03600 AS588_03605 PF01165 Ribosomal protein S21 AS588_03610 PF09424 Yqey-like protein AS588_03615 PF01957 NfeD-like C-terminal, partner-binding AS588_03615 PF01972 Serine dehydrogenase proteinase AS588_03620 PF12127 AS588_03620 AS588_03630 PF07873 YabP family AS588_03635 PF06898 AS588_03635 AS588_03640 PF02562 PhoH-like protein AS588_03645 PF01966 HD domain AS588_03645 PF07697 AS588_03645 AS588_03645 PF07698 AS588_03645 AS588_03650 PF02130 Uncharacterized protein family UPF0054 AS588_03655 PF01219 Prokaryotic diacylglycerol kinase AS588_03660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS588_03665 PF01926 50S ribosome-binding GTPase AS588_03665 PF07650 KH domain AS588_03670 PF02565 Recombination protein O C terminal AS588_03670 PF11967 Recombination protein O N terminal AS588_03675 PF02091 Glycyl-tRNA synthetase alpha subunit AS588_03680 PF02092 AS588_03680 AS588_03680 PF05746 DALR anticodon binding domain AS588_03685 PF00571 CBS domain AS588_03685 PF08279 HTH domain AS588_03690 PF03618 AS588_03690 AS588_03695 PF02639 AS588_03695 AS588_03700 PF01807 CHC2 zinc finger AS588_03700 PF08275 DNA primase catalytic core, N-terminal domain AS588_03700 PF10410 DnaB-helicase binding domain of primase AS588_03700 PF13155 Toprim-like AS588_03705 PF00140 Sigma-70 factor, region 1 AS588_03705 PF03979 Sigma-70 factor, region 1 AS588_03705 PF04539 Sigma-70 region 3 AS588_03705 PF04542 Sigma-70 region 2 AS588_03705 PF04545 Sigma-70, region 4 AS588_03710 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AS588_03715 PF04816 Family of unknown function (DUF633) AS588_03720 PF01784 NIF3 (NGG1p interacting factor 3) AS588_03725 PF02401 LytB protein AS588_03730 PF14181 AS588_03730 AS588_03735 PF00270 DEAD/DEAH box helicase AS588_03735 PF00271 Helicase conserved C-terminal domain AS588_03740 PF01261 Xylose isomerase-like TIM barrel AS588_03745 PF11116 AS588_03745 AS588_03750 PF02588 AS588_03750 AS588_03750 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS588_03755 PF01475 Ferric uptake regulator family AS588_03770 PF04551 GcpE protein AS588_03780 PF06691 AS588_03780 AS588_03785 PF04306 AS588_03785 AS588_03790 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AS588_03790 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AS588_03795 PF07690 Major Facilitator Superfamily AS588_03800 PF00905 Penicillin binding protein transpeptidase domain AS588_03800 PF03717 Penicillin-binding Protein dimerisation domain AS588_03805 PF12849 PBP superfamily domain AS588_03810 PF00528 Binding-protein-dependent transport system inner membrane component AS588_03815 PF00528 Binding-protein-dependent transport system inner membrane component AS588_03820 PF00005 ABC transporter AS588_03825 PF00005 ABC transporter AS588_03830 PF02618 YceG-like family AS588_03840 PF01812 5-formyltetrahydrofolate cyclo-ligase family AS588_03845 PF03553 AS588_03845 AS588_03850 PF06014 Bacterial protein of unknown function (DUF910) AS588_03855 PF00480 ROK family AS588_03860 PF00246 Zinc carboxypeptidase AS588_03870 PF01910 Domain of unknown function DUF77 AS588_03875 PF00753 Metallo-beta-lactamase superfamily AS588_03880 PF11117 AS588_03880 AS588_03885 PF03960 ArsC family AS588_03895 PF01740 STAS domain AS588_03900 PF00571 CBS domain AS588_03900 PF01595 AS588_03900 AS588_03900 PF03471 Transporter associated domain AS588_03905 PF01544 CorA-like Mg2+ transporter protein AS588_03910 PF00437 Type II/IV secretion system protein AS588_03915 PF00482 Type II secretion system (T2SS), protein F AS588_03925 PF07963 Prokaryotic N-terminal methylation motif AS588_03935 PF15980 AS588_03935 AS588_03940 PF14173 AS588_03940 AS588_03945 PF14038 AS588_03945 AS588_03950 PF13028 Protein of unknown function (DUF3889) AS588_03960 PF00717 Peptidase S24-like AS588_03965 PF12389 AS588_03965 AS588_03970 PF01381 Helix-turn-helix AS588_03970 PF08671 Anti-repressor SinI AS588_03975 PF08671 Anti-repressor SinI AS588_03980 PF11079 AS588_03980 AS588_03985 PF00176 SNF2 family N-terminal domain AS588_03985 PF00271 Helicase conserved C-terminal domain AS588_03990 PF01571 Aminomethyltransferase folate-binding domain AS588_03990 PF08669 Glycine cleavage T-protein C-terminal barrel domain AS588_03995 PF02347 Glycine cleavage system P-protein AS588_04000 PF02347 Glycine cleavage system P-protein AS588_04005 PF00581 Rhodanese-like domain AS588_04010 PF03099 Biotin/lipoate A/B protein ligase family AS588_04015 PF01325 Iron dependent repressor, N-terminal DNA binding domain AS588_04015 PF02742 Iron dependent repressor, metal binding and dimerisation domain AS588_04020 PF01734 Patatin-like phospholipase AS588_04030 PF07136 AS588_04030 AS588_04035 PF11085 AS588_04035 AS588_04040 PF00557 Metallopeptidase family M24 AS588_04040 PF01321 Creatinase/Prolidase N-terminal domain AS588_04045 PF01132 Elongation factor P (EF-P) OB domain AS588_04045 PF08207 Elongation factor P (EF-P) KOW-like domain AS588_04045 PF09285 Elongation factor P, C-terminal AS588_04050 PF10942 AS588_04050 AS588_04055 PF00004 ATPase family associated with various cellular activities (AAA) AS588_04060 PF09548 AS588_04060 AS588_04065 PF06686 AS588_04065 AS588_04070 PF06686 AS588_04070 AS588_04075 PF09546 AS588_04075 AS588_04080 PF09581 AS588_04080 AS588_04090 PF12685 SpoIIIAH-like protein AS588_04095 PF00364 Biotin-requiring enzyme AS588_04100 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AS588_04100 PF02785 Biotin carboxylase C-terminal domain AS588_04100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS588_04105 PF03780 AS588_04105 AS588_04110 PF01029 NusB family AS588_04115 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AS588_04115 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AS588_04120 PF02601 AS588_04120 AS588_04120 PF13742 AS588_04120 AS588_04125 PF02609 Exonuclease VII small subunit AS588_04130 PF00348 Polyprenyl synthetase AS588_04135 PF02779 Transketolase, pyrimidine binding domain AS588_04135 PF02780 Transketolase, C-terminal domain AS588_04135 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AS588_04140 PF01479 S4 domain AS588_04140 PF01728 FtsJ-like methyltransferase AS588_04145 PF01316 Arginine repressor, DNA binding domain AS588_04145 PF02863 Arginine repressor, C-terminal domain AS588_04150 PF13476 AAA domain AS588_04155 PF05580 AS588_04155 AS588_04155 PF13180 PDZ domain AS588_04160 PF00072 Response regulator receiver domain AS588_04160 PF08769 Sporulation initiation factor Spo0A C terminal AS588_04165 PF00842 Alanine racemase, C-terminal domain AS588_04165 PF01168 Alanine racemase, N-terminal domain AS588_04170 PF10676 AS588_04170 AS588_04175 PF10676 AS588_04175 AS588_04180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS588_04190 PF01381 Helix-turn-helix AS588_04190 PF06803 AS588_04190 AS588_04195 PF02659 AS588_04195 AS588_04205 PF01520 N-acetylmuramoyl-L-alanine amidase AS588_04210 PF03009 Glycerophosphoryl diester phosphodiesterase family AS588_04215 PF00108 Thiolase, N-terminal domain AS588_04215 PF02803 Thiolase, C-terminal domain AS588_04220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS588_04220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS588_04225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS588_04225 PF02770 Acyl-CoA dehydrogenase, middle domain AS588_04225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS588_04230 PF00285 Citrate synthase AS588_04235 PF03972 MmgE/PrpD family AS588_04240 PF13714 Phosphoenolpyruvate phosphomutase AS588_04245 PF11118 AS588_04245 AS588_04250 PF00158 Sigma-54 interaction domain AS588_04250 PF00989 PAS fold AS588_04250 PF02954 Bacterial regulatory protein, Fis family AS588_04255 PF01515 Phosphate acetyl/butaryl transferase AS588_04260 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS588_04260 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AS588_04265 PF00871 Acetokinase family AS588_04270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS588_04270 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS588_04275 PF00676 Dehydrogenase E1 component AS588_04280 PF02779 Transketolase, pyrimidine binding domain AS588_04280 PF02780 Transketolase, C-terminal domain AS588_04285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS588_04285 PF00364 Biotin-requiring enzyme AS588_04285 PF02817 e3 binding domain AS588_04290 PF00781 Diacylglycerol kinase catalytic domain AS588_04295 PF06491 Disulphide isomerase AS588_04300 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS588_04305 PF00528 Binding-protein-dependent transport system inner membrane component AS588_04310 PF00005 ABC transporter AS588_04315 PF06081 AS588_04315 AS588_04315 PF11728 DUF939 C-terminal domain AS588_04320 PF03734 L,D-transpeptidase catalytic domain AS588_04325 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS588_04330 PF01039 Carboxyl transferase domain AS588_04335 PF01546 Peptidase family M20/M25/M40 AS588_04335 PF07687 Peptidase dimerisation domain AS588_04340 PF02096 60Kd inner membrane protein AS588_04350 PF00817 impB/mucB/samB family AS588_04350 PF11798 IMS family HHH motif AS588_04350 PF11799 impB/mucB/samB family C-terminal domain AS588_04355 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AS588_04355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS588_04360 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AS588_04360 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AS588_04365 PF12706 Beta-lactamase superfamily domain AS588_04370 PF00471 Ribosomal protein L33 AS588_04375 PF00561 alpha/beta hydrolase fold AS588_04380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS588_04385 PF06942 AS588_04385 AS588_04390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_04390 PF03466 LysR substrate binding domain AS588_04395 PF02357 Transcription termination factor nusG AS588_04400 PF00698 Acyl transferase domain AS588_04400 PF03060 Nitronate monooxygenase AS588_04415 PF00501 AMP-binding enzyme AS588_04415 PF13193 AMP-binding enzyme C-terminal domain AS588_04420 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_04425 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_04425 PF00550 Phosphopantetheine attachment site AS588_04425 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_04425 PF08242 Methyltransferase domain AS588_04425 PF08659 KR domain AS588_04425 PF14765 Polyketide synthase dehydratase AS588_04425 PF16197 AS588_04425 AS588_04430 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_04430 PF00550 Phosphopantetheine attachment site AS588_04430 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_04430 PF08659 KR domain AS588_04430 PF14765 Polyketide synthase dehydratase AS588_04430 PF16197 AS588_04430 AS588_04435 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_04435 PF00550 Phosphopantetheine attachment site AS588_04435 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_04435 PF08659 KR domain AS588_04435 PF14765 Polyketide synthase dehydratase AS588_04435 PF16197 AS588_04435 AS588_04440 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_04440 PF00550 Phosphopantetheine attachment site AS588_04440 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_04440 PF08242 Methyltransferase domain AS588_04440 PF08659 KR domain AS588_04440 PF14765 Polyketide synthase dehydratase AS588_04440 PF16197 AS588_04440 AS588_04445 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_04445 PF00550 Phosphopantetheine attachment site AS588_04445 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_04445 PF08659 KR domain AS588_04445 PF14765 Polyketide synthase dehydratase AS588_04445 PF16197 AS588_04445 AS588_04450 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_04450 PF00550 Phosphopantetheine attachment site AS588_04450 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_04450 PF08659 KR domain AS588_04450 PF14765 Polyketide synthase dehydratase AS588_04450 PF16197 AS588_04450 AS588_04455 PF00107 Zinc-binding dehydrogenase AS588_04455 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_04455 PF00550 Phosphopantetheine attachment site AS588_04455 PF00975 Thioesterase domain AS588_04455 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_04455 PF08240 Alcohol dehydrogenase GroES-like domain AS588_04455 PF08242 Methyltransferase domain AS588_04455 PF16197 AS588_04455 AS588_04460 PF00067 Cytochrome P450 AS588_04465 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AS588_04465 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AS588_04470 PF00378 Enoyl-CoA hydratase/isomerase family AS588_04475 PF03807 NADP oxidoreductase coenzyme F420-dependent AS588_04475 PF14748 Pyrroline-5-carboxylate reductase dimerisation AS588_04480 PF00753 Metallo-beta-lactamase superfamily AS588_04485 PF00106 short chain dehydrogenase AS588_04490 PF00291 Pyridoxal-phosphate dependent enzyme AS588_04495 PF00485 Phosphoribulokinase / Uridine kinase family AS588_04500 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS588_04505 PF01594 AS588_04505 AS588_04510 PF14164 AS588_04510 AS588_04515 PF08863 AS588_04515 AS588_04520 PF00817 impB/mucB/samB family AS588_04520 PF11798 IMS family HHH motif AS588_04520 PF11799 impB/mucB/samB family C-terminal domain AS588_04525 PF00583 Acetyltransferase (GNAT) family AS588_04530 PF03992 Antibiotic biosynthesis monooxygenase AS588_04535 PF04229 GrpB protein AS588_04535 PF13673 Acetyltransferase (GNAT) domain AS588_04540 PF01521 Iron-sulphur cluster biosynthesis AS588_04545 PF10827 AS588_04545 AS588_04550 PF12146 Putative lysophospholipase AS588_04555 PF13025 AS588_04555 AS588_04560 PF00248 Aldo/keto reductase family AS588_04565 PF13072 AS588_04565 AS588_04570 PF00293 NUDIX domain AS588_04575 PF13263 PHP-associated AS588_04580 PF01381 Helix-turn-helix AS588_04585 PF00710 Asparaginase AS588_04590 PF00206 Lyase AS588_04590 PF10415 Fumarase C C-terminus AS588_04595 PF03553 AS588_04595 AS588_04600 PF00390 Malic enzyme, N-terminal domain AS588_04600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS588_04600 PF03949 Malic enzyme, NAD binding domain AS588_04615 PF01944 AS588_04615 AS588_04620 PF01475 Ferric uptake regulator family AS588_04625 PF14004 AS588_04625 AS588_04630 PF00589 Phage integrase family AS588_04630 PF02899 Phage integrase, N-terminal SAM-like domain AS588_04635 PF01676 Metalloenzyme superfamily AS588_04640 PF01048 Phosphorylase superfamily AS588_04645 PF00768 D-alanyl-D-alanine carboxypeptidase AS588_04645 PF07943 Penicillin-binding protein 5, C-terminal domain AS588_04650 PF01740 STAS domain AS588_04655 PF13581 Histidine kinase-like ATPase domain AS588_04660 PF04539 Sigma-70 region 3 AS588_04660 PF04542 Sigma-70 region 2 AS588_04660 PF04545 Sigma-70, region 4 AS588_04665 PF12164 Stage V sporulation protein AA AS588_04670 PF13782 AS588_04670 AS588_04675 PF03862 AS588_04675 AS588_04680 PF07451 Stage V sporulation protein AD (SpoVAD) AS588_04685 PF03862 AS588_04685 AS588_04690 PF14097 AS588_04690 AS588_04695 PF03323 AS588_04695 AS588_04700 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AS588_04700 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AS588_04705 PF06207 AS588_04705 AS588_04710 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AS588_04715 PF07301 AS588_04715 AS588_04720 PF00717 Peptidase S24-like AS588_04730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS588_04730 PF01872 RibD C-terminal domain AS588_04735 PF00677 Lumazine binding domain AS588_04740 PF00925 GTP cyclohydrolase II AS588_04740 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AS588_04745 PF00885 6,7-dimethyl-8-ribityllumazine synthase AS588_04750 PF00583 Acetyltransferase (GNAT) family AS588_04755 PF03745 Domain of unknown function (DUF309) AS588_04760 PF02616 ScpA/B protein AS588_04765 PF04079 Putative transcriptional regulators (Ypuh-like) AS588_04770 PF13047 AS588_04770 AS588_04775 PF00768 D-alanyl-D-alanine carboxypeptidase AS588_04775 PF07943 Penicillin-binding protein 5, C-terminal domain AS588_04780 PF07670 Nucleoside recognition AS588_04785 PF07670 Nucleoside recognition AS588_04790 PF00849 RNA pseudouridylate synthase AS588_04790 PF01479 S4 domain AS588_04795 PF00578 AhpC/TSA family AS588_04800 PF05140 AS588_04800 AS588_04805 PF01578 AS588_04805 AS588_04810 PF00072 Response regulator receiver domain AS588_04810 PF00486 Transcriptional regulatory protein, C terminal AS588_04815 PF00512 His Kinase A (phospho-acceptor) domain AS588_04815 PF00672 HAMP domain AS588_04815 PF00989 PAS fold AS588_04815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_04820 PF04542 Sigma-70 region 2 AS588_04820 PF08281 Sigma-70, region 4 AS588_04830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS588_04830 PF01842 ACT domain AS588_04830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS588_04835 PF12822 Protein of unknown function (DUF3816) AS588_04840 PF13370 4Fe-4S single cluster domain AS588_04845 PF14493 AS588_04845 AS588_04850 PF00270 DEAD/DEAH box helicase AS588_04850 PF00271 Helicase conserved C-terminal domain AS588_04855 PF02517 CAAX protease self-immunity AS588_04860 PF01476 LysM domain AS588_04865 PF10864 AS588_04865 AS588_04870 PF12850 Calcineurin-like phosphoesterase superfamily domain AS588_04875 PF05389 Negative regulator of genetic competence (MecA) AS588_04880 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS588_04880 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AS588_04885 PF13738 Pyridine nucleotide-disulphide oxidoreductase AS588_04890 PF13367 AS588_04890 AS588_04895 PF01471 Putative peptidoglycan binding domain AS588_04895 PF07486 Cell Wall Hydrolase AS588_04900 PF03413 Peptidase propeptide and YPEB domain AS588_04900 PF14620 AS588_04900 AS588_04905 PF07238 PilZ domain AS588_04905 PF12945 Flagellar protein YcgR AS588_04910 PF02224 Cytidylate kinase AS588_04915 PF00575 S1 RNA binding domain AS588_04920 PF01070 FMN-dependent dehydrogenase AS588_04930 PF01926 50S ribosome-binding GTPase AS588_04930 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AS588_04935 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AS588_04935 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AS588_04940 PF10966 AS588_04940 AS588_04950 PF09547 AS588_04950 AS588_04955 PF00216 Bacterial DNA-binding protein AS588_04960 PF01227 GTP cyclohydrolase I AS588_04965 PF02081 Tryptophan RNA-binding attenuator protein AS588_04970 PF07307 AS588_04970 AS588_04975 PF01209 ubiE/COQ5 methyltransferase family AS588_04980 PF00348 Polyprenyl synthetase AS588_04985 PF00334 Nucleoside diphosphate kinase AS588_04990 PF01739 CheR methyltransferase, SAM binding domain AS588_04990 PF03705 CheR methyltransferase, all-alpha domain AS588_04995 PF01264 Chorismate synthase AS588_05000 PF01761 3-dehydroquinate synthase AS588_05005 PF07736 Chorismate mutase type I AS588_05010 PF00425 chorismate binding enzyme AS588_05010 PF04715 Anthranilate synthase component I, N terminal region AS588_05015 PF00591 Glycosyl transferase family, a/b domain AS588_05015 PF02885 Glycosyl transferase family, helical bundle domain AS588_05020 PF00218 Indole-3-glycerol phosphate synthase AS588_05025 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AS588_05030 PF00291 Pyridoxal-phosphate dependent enzyme AS588_05035 PF00290 Tryptophan synthase alpha chain AS588_05040 PF00155 Aminotransferase class I and II AS588_05045 PF01842 ACT domain AS588_05045 PF02153 Prephenate dehydrogenase AS588_05050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AS588_05055 PF13429 Tetratricopeptide repeat AS588_05055 PF13432 Tetratricopeptide repeat AS588_05055 PF14559 Tetratricopeptide repeat AS588_05060 PF08858 IDEAL domain AS588_05060 PF08864 UPF0302 domain AS588_05065 PF10673 AS588_05065 AS588_05070 PF00355 Rieske [2Fe-2S] domain AS588_05070 PF08802 Cytochrome B6-F complex Fe-S subunit AS588_05075 PF00033 Cytochrome b(N-terminal)/b6/petB AS588_05080 PF00032 Cytochrome b(C-terminal)/b6/petD AS588_05080 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AS588_05085 PF07187 AS588_05085 AS588_05090 PF09577 AS588_05090 AS588_05095 PF00190 Cupin AS588_05100 PF02588 AS588_05100 AS588_05100 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS588_05105 PF03819 MazG nucleotide pyrophosphohydrolase domain AS588_05110 PF01113 Dihydrodipicolinate reductase, N-terminus AS588_05110 PF05173 Dihydrodipicolinate reductase, C-terminus AS588_05115 PF02142 MGS-like domain AS588_05120 PF02585 GlcNAc-PI de-N-acetylase AS588_05125 PF00534 Glycosyl transferases group 1 AS588_05125 PF13439 Glycosyltransferase Family 4 AS588_05130 PF01743 Poly A polymerase head domain AS588_05130 PF12627 Probable RNA and SrmB- binding site of polymerase A AS588_05130 PF13735 tRNA nucleotidyltransferase domain 2 putative AS588_05135 PF02237 Biotin protein ligase C terminal domain AS588_05135 PF03099 Biotin/lipoate A/B protein ligase family AS588_05135 PF08279 HTH domain AS588_05140 PF02548 Ketopantoate hydroxymethyltransferase AS588_05145 PF02569 Pantoate-beta-alanine ligase AS588_05150 PF02261 Aspartate decarboxylase AS588_05155 PF00929 Exonuclease AS588_05155 PF04851 Type III restriction enzyme, res subunit AS588_05155 PF13307 Helicase C-terminal domain AS588_05165 PF00155 Aminotransferase class I and II AS588_05170 PF00152 tRNA synthetases class II (D, K and N) AS588_05170 PF01336 OB-fold nucleic acid binding domain AS588_05175 PF07261 Replication initiation and membrane attachment AS588_05180 PF00633 Helix-hairpin-helix motif AS588_05180 PF00730 HhH-GPD superfamily base excision DNA repair protein AS588_05190 PF00905 Penicillin binding protein transpeptidase domain AS588_05190 PF00912 Transglycosylase AS588_05195 PF03838 Recombination protein U AS588_05200 PF10720 AS588_05200 AS588_05210 PF17522 AS588_05210 AS588_05215 PF08807 Bacterial domain of unknown function (DUF1798) AS588_05220 PF14178 AS588_05220 AS588_05225 PF14179 AS588_05225 AS588_05235 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AS588_05240 PF00270 DEAD/DEAH box helicase AS588_05240 PF00271 Helicase conserved C-terminal domain AS588_05240 PF09369 AS588_05240 AS588_05245 PF13482 RNase_H superfamily AS588_05250 PF06908 Protein of unknown function (DUF1273) AS588_05255 PF05103 DivIVA protein AS588_05265 PF01170 Putative RNA methylase family UPF0020 AS588_05265 PF02926 THUMP domain AS588_05280 PF13307 Helicase C-terminal domain AS588_05285 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AS588_05290 PF00156 Phosphoribosyl transferase domain AS588_05295 PF00860 Permease family AS588_05305 PF00857 Isochorismatase family AS588_05320 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AS588_05325 PF13302 Acetyltransferase (GNAT) domain AS588_05330 PF00195 Chalcone and stilbene synthases, N-terminal domain AS588_05330 PF02797 Chalcone and stilbene synthases, C-terminal domain AS588_05335 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family AS588_05340 PF00350 Dynamin family AS588_05345 PF10752 AS588_05345 AS588_05350 PF01367 5'-3' exonuclease, C-terminal SAM fold AS588_05350 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AS588_05360 PF13456 Reverse transcriptase-like AS588_05365 PF02592 AS588_05365 AS588_05370 PF13456 Reverse transcriptase-like AS588_05375 PF10782 AS588_05375 AS588_05380 PF10819 AS588_05380 AS588_05390 PF00313 'Cold-shock' DNA-binding domain AS588_05395 PF00534 Glycosyl transferases group 1 AS588_05395 PF06925 AS588_05395 AS588_05400 PF04204 Homoserine O-succinyltransferase AS588_05405 PF00255 Glutathione peroxidase AS588_05410 PF01966 HD domain AS588_05415 PF08712 Scaffold protein Nfu/NifU N terminal AS588_05415 PF13646 HEAT repeats AS588_05415 PF13769 AS588_05415 AS588_05420 PF00920 Dehydratase family AS588_05425 PF06491 Disulphide isomerase AS588_05430 PF04445 Putative SAM-dependent methyltransferase AS588_05435 PF14005 AS588_05435 AS588_05440 PF00303 Thymidylate synthase AS588_05445 PF00186 Dihydrofolate reductase AS588_05455 PF03006 AS588_05455 AS588_05460 PF00158 Sigma-54 interaction domain AS588_05465 PF00291 Pyridoxal-phosphate dependent enzyme AS588_05465 PF00585 C-terminal regulatory domain of Threonine dehydratase AS588_05470 PF10751 AS588_05470 AS588_05475 PF02630 SCO1/SenC AS588_05480 PF13472 GDSL-like Lipase/Acylhydrolase family AS588_05485 PF09911 AS588_05485 AS588_05490 PF01047 MarR family AS588_05495 PF01625 Peptide methionine sulfoxide reductase AS588_05500 PF01641 SelR domain AS588_05505 PF02719 Polysaccharide biosynthesis protein AS588_05510 PF02333 Phytase AS588_05515 PF12996 AS588_05515 AS588_05515 PF13524 Glycosyl transferases group 1 AS588_05530 PF00535 Glycosyl transferase family 2 AS588_05535 PF00583 Acetyltransferase (GNAT) family AS588_05540 PF09680 AS588_05540 AS588_05550 PF00202 Aminotransferase class-III AS588_05555 PF01144 Coenzyme A transferase AS588_05560 PF01144 Coenzyme A transferase AS588_05565 PF01546 Peptidase family M20/M25/M40 AS588_05565 PF07687 Peptidase dimerisation domain AS588_05570 PF00583 Acetyltransferase (GNAT) family AS588_05575 PF12544 Lysine-2,3-aminomutase AS588_05580 PF14122 AS588_05580 AS588_05585 PF06855 Protein of unknown function (DUF1250) AS588_05605 PF01569 PAP2 superfamily AS588_05610 PF14191 AS588_05610 AS588_05615 PF01048 Phosphorylase superfamily AS588_05620 PF02557 D-alanyl-D-alanine carboxypeptidase AS588_05630 PF08241 Methyltransferase domain AS588_05635 PF00595 PDZ domain (Also known as DHR or GLGF) AS588_05635 PF01471 Putative peptidoglycan binding domain AS588_05635 PF03572 Peptidase family S41 AS588_05640 PF00392 Bacterial regulatory proteins, gntR family AS588_05640 PF07702 UTRA domain AS588_05645 PF00232 Glycosyl hydrolase family 1 AS588_05650 PF02055 O-Glycosyl hydrolase family 30 AS588_05650 PF17189 AS588_05650 AS588_05655 PF00474 Sodium:solute symporter family AS588_05660 PF11755 AS588_05660 AS588_05665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS588_05670 PF01738 Dienelactone hydrolase family AS588_05675 PF00881 Nitroreductase family AS588_05680 PF01638 HxlR-like helix-turn-helix AS588_05690 PF14552 Tautomerase enzyme AS588_05705 PF00892 EamA-like transporter family AS588_05715 PF08830 Protein of unknown function (DUF1806) AS588_05720 PF02585 GlcNAc-PI de-N-acetylase AS588_05725 PF01740 STAS domain AS588_05730 PF01554 MatE AS588_05735 PF02457 DisA bacterial checkpoint controller nucleotide-binding AS588_05735 PF10372 Bacterial membrane-spanning protein N-terminus AS588_05740 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AS588_05745 PF00877 NlpC/P60 family AS588_05745 PF01476 LysM domain AS588_05750 PF00080 Copper/zinc superoxide dismutase (SODC) AS588_05755 PF07728 AAA domain (dynein-related subfamily) AS588_05760 PF00092 von Willebrand factor type A domain AS588_05765 PF00676 Dehydrogenase E1 component AS588_05765 PF02779 Transketolase, pyrimidine binding domain AS588_05765 PF16870 AS588_05765 AS588_05770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS588_05770 PF00364 Biotin-requiring enzyme AS588_05770 PF02817 e3 binding domain AS588_05775 PF00753 Metallo-beta-lactamase superfamily AS588_05780 PF01758 Sodium Bile acid symporter family AS588_05785 PF00209 Sodium:neurotransmitter symporter family AS588_05790 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AS588_05790 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AS588_05795 PF13243 Prenyltransferase-like AS588_05795 PF13249 Prenyltransferase-like AS588_05800 PF00171 Aldehyde dehydrogenase family AS588_05810 PF08000 Bacterial PH domain AS588_05825 PF00011 Hsp20/alpha crystallin family AS588_05835 PF10737 AS588_05835 AS588_05840 PF01258 Prokaryotic dksA/traR C4-type zinc finger AS588_05845 PF02525 Flavodoxin-like fold AS588_05855 PF00270 DEAD/DEAH box helicase AS588_05855 PF00271 Helicase conserved C-terminal domain AS588_05855 PF00570 HRDC domain AS588_05855 PF09382 RQC domain AS588_05855 PF16124 AS588_05855 AS588_05860 PF01476 LysM domain AS588_05860 PF06725 3D domain AS588_05870 PF02016 LD-carboxypeptidase AS588_05885 PF04238 AS588_05885 AS588_05890 PF13702 Lysozyme-like AS588_05895 PF01022 Bacterial regulatory protein, arsR family AS588_05905 PF00753 Metallo-beta-lactamase superfamily AS588_05910 PF00440 Bacterial regulatory proteins, tetR family AS588_05910 PF13305 WHG domain AS588_05915 PF07883 Cupin domain AS588_05915 PF12833 Helix-turn-helix domain AS588_05920 PF01588 Putative tRNA binding domain AS588_05925 PF01638 HxlR-like helix-turn-helix AS588_05930 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_05940 PF12802 MarR family AS588_05950 PF00384 Molybdopterin oxidoreductase AS588_05950 PF01568 Molydopterin dinucleotide binding domain AS588_05950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS588_05955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS588_05955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS588_05960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS588_05960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS588_05965 PF07690 Major Facilitator Superfamily AS588_05980 PF00106 short chain dehydrogenase AS588_05985 PF02334 Replication terminator protein AS588_05990 PF03807 NADP oxidoreductase coenzyme F420-dependent AS588_05990 PF14748 Pyrroline-5-carboxylate reductase dimerisation AS588_05995 PF00696 Amino acid kinase family AS588_05995 PF01472 PUA domain AS588_06000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_06000 PF03466 LysR substrate binding domain AS588_06005 PF00310 Glutamine amidotransferases class-II AS588_06005 PF01493 GXGXG motif AS588_06005 PF01645 Conserved region in glutamate synthase AS588_06005 PF04898 Glutamate synthase central domain AS588_06010 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS588_06010 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AS588_06020 PF00107 Zinc-binding dehydrogenase AS588_06020 PF08240 Alcohol dehydrogenase GroES-like domain AS588_06025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_06025 PF03466 LysR substrate binding domain AS588_06030 PF12840 Helix-turn-helix domain AS588_06035 PF07690 Major Facilitator Superfamily AS588_06040 PF01019 Gamma-glutamyltranspeptidase AS588_06045 PF12728 Helix-turn-helix domain AS588_06050 PF00589 Phage integrase family AS588_06060 PF16800 AS588_06060 AS588_06065 PF01554 MatE AS588_06070 PF01263 Aldose 1-epimerase AS588_06075 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AS588_06080 PF00501 AMP-binding enzyme AS588_06080 PF00550 Phosphopantetheine attachment site AS588_06080 PF00668 Condensation domain AS588_06080 PF13193 AMP-binding enzyme C-terminal domain AS588_06085 PF00501 AMP-binding enzyme AS588_06085 PF00550 Phosphopantetheine attachment site AS588_06085 PF00668 Condensation domain AS588_06085 PF13193 AMP-binding enzyme C-terminal domain AS588_06090 PF00501 AMP-binding enzyme AS588_06090 PF00550 Phosphopantetheine attachment site AS588_06090 PF00668 Condensation domain AS588_06090 PF13193 AMP-binding enzyme C-terminal domain AS588_06095 PF00501 AMP-binding enzyme AS588_06095 PF00550 Phosphopantetheine attachment site AS588_06095 PF00668 Condensation domain AS588_06095 PF13193 AMP-binding enzyme C-terminal domain AS588_06100 PF00501 AMP-binding enzyme AS588_06100 PF00550 Phosphopantetheine attachment site AS588_06100 PF00668 Condensation domain AS588_06100 PF00975 Thioesterase domain AS588_06100 PF13193 AMP-binding enzyme C-terminal domain AS588_06105 PF07098 AS588_06105 AS588_06110 PF02638 AS588_06110 AS588_06115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS588_06115 PF02770 Acyl-CoA dehydrogenase, middle domain AS588_06115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS588_06120 PF00501 AMP-binding enzyme AS588_06120 PF13193 AMP-binding enzyme C-terminal domain AS588_06125 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AS588_06125 PF02785 Biotin carboxylase C-terminal domain AS588_06125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS588_06130 PF00364 Biotin-requiring enzyme AS588_06135 PF00682 HMGL-like AS588_06140 PF00378 Enoyl-CoA hydratase/isomerase family AS588_06145 PF01039 Carboxyl transferase domain AS588_06150 PF09335 AS588_06150 AS588_06155 PF00483 Nucleotidyl transferase AS588_06160 PF04138 AS588_06160 AS588_06165 PF03744 AS588_06165 AS588_06170 PF00202 Aminotransferase class-III AS588_06175 PF00155 Aminotransferase class I and II AS588_06180 PF13500 AAA domain AS588_06185 PF04055 Radical SAM superfamily AS588_06185 PF06968 Biotin and Thiamin Synthesis associated domain AS588_06190 PF00067 Cytochrome P450 AS588_06195 PF02447 AS588_06195 AS588_06200 PF01144 Coenzyme A transferase AS588_06205 PF01144 Coenzyme A transferase AS588_06210 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_06215 PF00698 Acyl transferase domain AS588_06220 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_06220 PF00202 Aminotransferase class-III AS588_06220 PF00501 AMP-binding enzyme AS588_06220 PF00550 Phosphopantetheine attachment site AS588_06220 PF00668 Condensation domain AS588_06220 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_06220 PF13193 AMP-binding enzyme C-terminal domain AS588_06220 PF16197 AS588_06220 AS588_06225 PF00501 AMP-binding enzyme AS588_06225 PF00550 Phosphopantetheine attachment site AS588_06225 PF00668 Condensation domain AS588_06225 PF13193 AMP-binding enzyme C-terminal domain AS588_06230 PF00501 AMP-binding enzyme AS588_06230 PF00550 Phosphopantetheine attachment site AS588_06230 PF00668 Condensation domain AS588_06230 PF00975 Thioesterase domain AS588_06230 PF13193 AMP-binding enzyme C-terminal domain AS588_06235 PF03422 Carbohydrate binding module (family 6) AS588_06235 PF04616 Glycosyl hydrolases family 43 AS588_06240 PF02055 O-Glycosyl hydrolase family 30 AS588_06240 PF17189 AS588_06240 AS588_06245 PF00072 Response regulator receiver domain AS588_06245 PF00486 Transcriptional regulatory protein, C terminal AS588_06250 PF00512 His Kinase A (phospho-acceptor) domain AS588_06250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_06255 PF09685 AS588_06255 AS588_06260 PF00150 Cellulase (glycosyl hydrolase family 5) AS588_06260 PF00942 Cellulose binding domain AS588_06270 PF14158 AS588_06270 AS588_06275 PF13761 AS588_06275 AS588_06285 PF07690 Major Facilitator Superfamily AS588_06290 PF00356 Bacterial regulatory proteins, lacI family AS588_06290 PF13377 Periplasmic binding protein-like domain AS588_06295 PF00106 short chain dehydrogenase AS588_06305 PF01081 KDPG and KHG aldolase AS588_06310 PF00107 Zinc-binding dehydrogenase AS588_06310 PF08240 Alcohol dehydrogenase GroES-like domain AS588_06315 PF00294 pfkB family carbohydrate kinase AS588_06320 PF01235 AS588_06320 AS588_06330 PF00521 DNA gyrase/topoisomerase IV, subunit A AS588_06330 PF03989 DNA gyrase C-terminal domain, beta-propeller AS588_06335 PF00204 DNA gyrase B AS588_06335 PF00986 DNA gyrase B subunit, carboxyl terminus AS588_06335 PF01751 Toprim domain AS588_06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_06340 PF13380 CoA binding domain AS588_06345 PF02660 AS588_06345 AS588_06360 PF03061 Thioesterase superfamily AS588_06370 PF08177 AS588_06370 AS588_06375 PF13040 AS588_06375 AS588_06380 PF00578 AhpC/TSA family AS588_06385 PF00330 Aconitase family (aconitate hydratase) AS588_06385 PF00694 Aconitase C-terminal domain AS588_06390 PF08175 AS588_06390 AS588_06395 PF08179 AS588_06395 AS588_06405 PF11084 AS588_06405 AS588_06410 PF07301 AS588_06410 AS588_06415 PF00072 Response regulator receiver domain AS588_06420 PF02683 AS588_06420 AS588_06425 PF09388 Spo0E like sporulation regulatory protein AS588_06430 PF03672 AS588_06430 AS588_06435 PF10747 Protein of unknown function (DUF2522) AS588_06440 PF00456 Transketolase, thiamine diphosphate binding domain AS588_06440 PF02779 Transketolase, pyrimidine binding domain AS588_06440 PF02780 Transketolase, C-terminal domain AS588_06445 PF05979 Bacterial protein of unknown function (DUF896) AS588_06450 PF00239 Resolvase, N terminal domain AS588_06455 PF01476 LysM domain AS588_06460 PF00717 Peptidase S24-like AS588_06460 PF01726 LexA DNA binding domain AS588_06470 PF10710 AS588_06470 AS588_06475 PF01145 SPFH domain / Band 7 family AS588_06480 PF05908 Protein of unknown function (DUF867) AS588_06485 PF00692 dUTPase AS588_06490 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain AS588_06490 PF12708 Pectate lyase superfamily protein AS588_06500 PF13302 Acetyltransferase (GNAT) domain AS588_06505 PF03067 Chitin binding domain AS588_06510 PF00296 Luciferase-like monooxygenase AS588_06515 PF13021 AS588_06515 AS588_06520 PF13302 Acetyltransferase (GNAT) domain AS588_06525 PF00583 Acetyltransferase (GNAT) family AS588_06525 PF14268 AS588_06525 AS588_06530 PF17094 AS588_06530 AS588_06545 PF00107 Zinc-binding dehydrogenase AS588_06545 PF08240 Alcohol dehydrogenase GroES-like domain AS588_06550 PF05163 DinB family AS588_06555 PF08279 HTH domain AS588_06555 PF13280 AS588_06555 AS588_06570 PF00391 PEP-utilising enzyme, mobile domain AS588_06570 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AS588_06575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS588_06575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS588_06580 PF01261 Xylose isomerase-like TIM barrel AS588_06585 PF00480 ROK family AS588_06585 PF13412 Winged helix-turn-helix DNA-binding AS588_06590 PF04616 Glycosyl hydrolases family 43 AS588_06595 PF13347 MFS/sugar transport protein AS588_06600 PF03022 Major royal jelly protein AS588_06605 PF00120 Glutamine synthetase, catalytic domain AS588_06605 PF03951 Glutamine synthetase, beta-Grasp domain AS588_06610 PF13411 MerR HTH family regulatory protein AS588_06615 PF06838 Methionine gamma-lyase AS588_06620 PF01926 50S ribosome-binding GTPase AS588_06620 PF13167 AS588_06620 AS588_06620 PF16360 AS588_06620 AS588_06625 PF00004 ATPase family associated with various cellular activities (AAA) AS588_06635 PF01520 N-acetylmuramoyl-L-alanine amidase AS588_06635 PF05036 Sporulation related domain AS588_06645 PF00268 Ribonucleotide reductase, small chain AS588_06650 PF00317 Ribonucleotide reductase, all-alpha domain AS588_06650 PF02867 Ribonucleotide reductase, barrel domain AS588_06650 PF08343 Ribonucleotide reductase N-terminal AS588_06655 PF07972 NrdI Flavodoxin like AS588_06665 PF14157 YmzC-like protein AS588_06670 PF17209 AS588_06670 AS588_06675 PF01715 IPP transferase AS588_06680 PF12788 AS588_06680 AS588_06690 PF00893 Small Multidrug Resistance protein AS588_06695 PF00893 Small Multidrug Resistance protein AS588_06700 PF02566 OsmC-like protein AS588_06705 PF05908 Protein of unknown function (DUF867) AS588_06715 PF00082 Subtilase family AS588_06725 PF06912 AS588_06725 AS588_06730 PF14040 AS588_06730 AS588_06735 PF00067 Cytochrome P450 AS588_06740 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_06740 PF00550 Phosphopantetheine attachment site AS588_06740 PF00975 Thioesterase domain AS588_06740 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_06740 PF08242 Methyltransferase domain AS588_06740 PF14765 Polyketide synthase dehydratase AS588_06740 PF16197 AS588_06740 AS588_06745 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_06745 PF00501 AMP-binding enzyme AS588_06745 PF00550 Phosphopantetheine attachment site AS588_06745 PF00668 Condensation domain AS588_06745 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_06745 PF08659 KR domain AS588_06745 PF13193 AMP-binding enzyme C-terminal domain AS588_06745 PF14765 Polyketide synthase dehydratase AS588_06745 PF16197 AS588_06745 AS588_06750 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_06750 PF00550 Phosphopantetheine attachment site AS588_06750 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_06750 PF08242 Methyltransferase domain AS588_06750 PF08659 KR domain AS588_06750 PF14765 Polyketide synthase dehydratase AS588_06750 PF16197 AS588_06750 AS588_06755 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_06755 PF00550 Phosphopantetheine attachment site AS588_06755 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_06755 PF08659 KR domain AS588_06755 PF14765 Polyketide synthase dehydratase AS588_06755 PF16197 AS588_06755 AS588_06760 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_06760 PF00501 AMP-binding enzyme AS588_06760 PF00550 Phosphopantetheine attachment site AS588_06760 PF00668 Condensation domain AS588_06760 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_06760 PF08659 KR domain AS588_06760 PF13193 AMP-binding enzyme C-terminal domain AS588_06760 PF14765 Polyketide synthase dehydratase AS588_06760 PF16197 AS588_06760 AS588_06765 PF00378 Enoyl-CoA hydratase/isomerase family AS588_06770 PF00378 Enoyl-CoA hydratase/isomerase family AS588_06775 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AS588_06775 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AS588_06780 PF00550 Phosphopantetheine attachment site AS588_06785 PF00698 Acyl transferase domain AS588_06790 PF00698 Acyl transferase domain AS588_06795 PF00698 Acyl transferase domain AS588_06800 PF00753 Metallo-beta-lactamase superfamily AS588_06810 PF01119 DNA mismatch repair protein, C-terminal domain AS588_06810 PF08676 MutL C terminal dimerisation domain AS588_06810 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_06815 PF00488 MutS domain V AS588_06815 PF01624 MutS domain I AS588_06815 PF05188 MutS domain II AS588_06815 PF05190 MutS family domain IV AS588_06815 PF05192 MutS domain III AS588_06820 PF10628 AS588_06820 AS588_06825 PF06133 Protein of unknown function (DUF964) AS588_06830 PF00919 Uncharacterized protein family UPF0004 AS588_06830 PF01938 TRAM domain AS588_06830 PF04055 Radical SAM superfamily AS588_06835 PF00155 Aminotransferase class I and II AS588_06840 PF00107 Zinc-binding dehydrogenase AS588_06840 PF08240 Alcohol dehydrogenase GroES-like domain AS588_06845 PF04232 Stage V sporulation protein S (SpoVS) AS588_06850 PF13277 YmdB-like protein AS588_06855 PF00013 KH domain AS588_06855 PF01966 HD domain AS588_06855 PF12072 AS588_06855 AS588_06860 PF00144 Beta-lactamase AS588_06865 PF00154 recA bacterial DNA recombination protein AS588_06870 PF00994 Probable molybdopterin binding domain AS588_06870 PF02464 Competence-damaged protein AS588_06875 PF01066 CDP-alcohol phosphatidyltransferase AS588_06880 PF13413 Helix-turn-helix domain AS588_06880 PF13464 AS588_06880 AS588_06885 PF11868 AS588_06885 AS588_06890 PF11588 Protein of unknown function (DUF3243) AS588_06895 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_06900 PF00675 Insulinase (Peptidase family M16) AS588_06900 PF05193 Peptidase M16 inactive domain AS588_06905 PF05193 Peptidase M16 inactive domain AS588_06910 PF03176 MMPL family AS588_06915 PF01047 MarR family AS588_06920 PF07690 Major Facilitator Superfamily AS588_06925 PF00392 Bacterial regulatory proteins, gntR family AS588_06925 PF07702 UTRA domain AS588_06930 PF01580 FtsK/SpoIIIE family AS588_06930 PF09397 Ftsk gamma domain AS588_06935 PF14035 AS588_06935 AS588_06940 PF00574 Clp protease AS588_06945 PF00753 Metallo-beta-lactamase superfamily AS588_06945 PF07521 RNA-metabolising metallo-beta-lactamase AS588_06950 PF00701 Dihydrodipicolinate synthetase family AS588_06955 PF00696 Amino acid kinase family AS588_06955 PF13840 ACT domain AS588_06960 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS588_06960 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS588_06965 PF02441 Flavoprotein AS588_06970 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AS588_06970 PF16924 AS588_06970 AS588_06975 PF05239 PRC-barrel domain AS588_06980 PF00675 Insulinase (Peptidase family M16) AS588_06980 PF05193 Peptidase M16 inactive domain AS588_06985 PF01522 Polysaccharide deacetylase AS588_06985 PF12229 Putative peptidoglycan binding domain AS588_06990 PF00013 KH domain AS588_06990 PF00575 S1 RNA binding domain AS588_06990 PF01138 3' exoribonuclease family, domain 1 AS588_06990 PF03725 3' exoribonuclease family, domain 2 AS588_06990 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AS588_06995 PF00312 Ribosomal protein S15 AS588_07000 PF01687 Riboflavin kinase AS588_07000 PF06574 FAD synthetase AS588_07005 PF01509 TruB family pseudouridylate synthase (N terminal domain) AS588_07005 PF16198 AS588_07005 AS588_07010 PF02033 Ribosome-binding factor A AS588_07015 PF04456 Protein of unknown function (DUF503) AS588_07020 PF00009 Elongation factor Tu GTP binding domain AS588_07020 PF04760 Translation initiation factor IF-2, N-terminal region AS588_07020 PF11987 Translation-initiation factor 2 AS588_07025 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AS588_07030 PF04296 Protein of unknown function (DUF448) AS588_07035 PF00575 S1 RNA binding domain AS588_07035 PF08529 NusA N-terminal domain AS588_07035 PF13184 NusA-like KH domain AS588_07040 PF02576 Uncharacterised BCR, YhbC family COG0779 AS588_07040 PF17384 AS588_07040 AS588_07045 PF00929 Exonuclease AS588_07045 PF02811 PHP domain AS588_07045 PF07733 Bacterial DNA polymerase III alpha subunit AS588_07045 PF11490 AS588_07045 AS588_07045 PF14480 AS588_07045 AS588_07045 PF14579 Helix-hairpin-helix motif AS588_07050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS588_07050 PF03129 Anticodon binding domain AS588_07050 PF04073 Aminoacyl-tRNA editing domain AS588_07055 PF02163 Peptidase family M50 AS588_07055 PF13180 PDZ domain AS588_07060 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AS588_07060 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal AS588_07060 PF13288 DXP reductoisomerase C-terminal domain AS588_07065 PF01148 Cytidylyltransferase family AS588_07070 PF01255 Putative undecaprenyl diphosphate synthase AS588_07075 PF01765 Ribosome recycling factor AS588_07080 PF00696 Amino acid kinase family AS588_07085 PF00889 Elongation factor TS AS588_07090 PF00318 Ribosomal protein S2 AS588_07100 PF04539 Sigma-70 region 3 AS588_07100 PF04542 Sigma-70 region 2 AS588_07100 PF04545 Sigma-70, region 4 AS588_07105 PF03975 CheD chemotactic sensory transduction AS588_07110 PF04509 CheC-like family AS588_07115 PF01584 CheW-like domain AS588_07120 PF01584 CheW-like domain AS588_07120 PF01627 Hpt domain AS588_07120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_07120 PF02895 Signal transducing histidine kinase, homodimeric domain AS588_07120 PF07194 P2 response regulator binding domain AS588_07125 PF00072 Response regulator receiver domain AS588_07125 PF01339 CheB methylesterase AS588_07130 PF10609 ParA/MinD ATPase like AS588_07135 PF00448 SRP54-type protein, GTPase domain AS588_07140 PF00771 FHIPEP family AS588_07145 PF01312 FlhB HrpN YscU SpaS Family AS588_07150 PF01311 AS588_07150 AS588_07155 PF01313 AS588_07155 AS588_07160 PF00813 AS588_07160 AS588_07165 PF04347 AS588_07165 AS588_07170 PF00072 Response regulator receiver domain AS588_07175 PF01052 Surface presentation of antigens (SPOA) AS588_07175 PF04509 CheC-like family AS588_07180 PF01052 Surface presentation of antigens (SPOA) AS588_07180 PF02154 Flagellar motor switch protein FliM AS588_07185 PF03748 AS588_07185 AS588_07190 PF06289 AS588_07190 AS588_07195 PF00460 Flagella basal body rod protein AS588_07195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS588_07200 PF03963 AS588_07200 AS588_07205 PF02120 Flagellar hook-length control protein FliK AS588_07210 PF03448 MgtE intracellular N domain AS588_07215 PF02050 Flagellar FliJ protein AS588_07220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS588_07220 PF02874 ATP synthase alpha/beta family, beta-barrel domain AS588_07225 PF02108 AS588_07225 AS588_07230 PF01706 FliG C-terminal domain AS588_07230 PF14841 FliG middle domain AS588_07230 PF14842 FliG N-terminal domain AS588_07235 PF01514 Secretory protein of YscJ/FliF family AS588_07235 PF08345 AS588_07235 AS588_07240 PF02049 AS588_07240 AS588_07245 PF00460 Flagella basal body rod protein AS588_07245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS588_07250 PF00460 Flagella basal body rod protein AS588_07255 PF06018 CodY GAF-like domain AS588_07255 PF08222 CodY helix-turn-helix domain AS588_07260 PF00004 ATPase family associated with various cellular activities (AAA) AS588_07260 PF07724 AAA domain (Cdc48 subfamily) AS588_07260 PF10431 C-terminal, D2-small domain, of ClpB protein AS588_07265 PF00227 Proteasome subunit AS588_07270 PF00589 Phage integrase family AS588_07270 PF02899 Phage integrase, N-terminal SAM-like domain AS588_07275 PF01134 Glucose inhibited division protein A AS588_07280 PF01131 DNA topoisomerase AS588_07280 PF01396 AS588_07280 AS588_07280 PF01751 Toprim domain AS588_07285 PF02481 DNA recombination-mediator protein A AS588_07290 PF00549 CoA-ligase AS588_07290 PF02629 CoA binding domain AS588_07295 PF00549 CoA-ligase AS588_07295 PF08442 ATP-grasp domain AS588_07300 PF01312 FlhB HrpN YscU SpaS Family AS588_07310 PF01351 Ribonuclease HII AS588_07315 PF01926 50S ribosome-binding GTPase AS588_07320 PF01245 Ribosomal protein L19 AS588_07325 PF01746 tRNA (Guanine-1)-methyltransferase AS588_07330 PF01782 RimM N-terminal domain AS588_07330 PF05239 PRC-barrel domain AS588_07335 PF11068 YlqD protein AS588_07340 PF13083 KH domain AS588_07345 PF00886 Ribosomal protein S16 AS588_07350 PF00448 SRP54-type protein, GTPase domain AS588_07350 PF02881 SRP54-type protein, helical bundle domain AS588_07350 PF02978 Signal peptide binding domain AS588_07355 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AS588_07360 PF01636 Phosphotransferase enzyme family AS588_07365 PF00448 SRP54-type protein, GTPase domain AS588_07365 PF02881 SRP54-type protein, helical bundle domain AS588_07370 PF02463 RecF/RecN/SMC N terminal domain AS588_07370 PF06470 SMC proteins Flexible Hinge Domain AS588_07375 PF00035 Double-stranded RNA binding motif AS588_07375 PF14622 Ribonuclease-III-like AS588_07380 PF00550 Phosphopantetheine attachment site AS588_07385 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_07390 PF00698 Acyl transferase domain AS588_07395 PF02504 Fatty acid synthesis protein AS588_07400 PF03061 Thioesterase superfamily AS588_07405 PF00270 DEAD/DEAH box helicase AS588_07405 PF00271 Helicase conserved C-terminal domain AS588_07405 PF17191 AS588_07405 AS588_07410 PF03313 AS588_07410 AS588_07415 PF01842 ACT domain AS588_07415 PF03315 Serine dehydratase beta chain AS588_07420 PF02734 DAK2 domain AS588_07420 PF13684 Dihydroxyacetone kinase family AS588_07425 PF03780 AS588_07425 AS588_07430 PF00830 Ribosomal L28 family AS588_07435 PF08183 AS588_07435 AS588_07440 PF04263 Thiamin pyrophosphokinase, catalytic domain AS588_07440 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain AS588_07445 PF00834 Ribulose-phosphate 3 epimerase family AS588_07450 PF03193 Protein of unknown function, DUF258 AS588_07450 PF16745 AS588_07450 AS588_07455 PF00069 Protein kinase domain AS588_07455 PF03793 PASTA domain AS588_07460 PF13672 Protein phosphatase 2C AS588_07465 PF04055 Radical SAM superfamily AS588_07465 PF13394 4Fe-4S single cluster domain AS588_07470 PF01029 NusB family AS588_07470 PF01189 NOL1/NOP2/sun family AS588_07475 PF00551 Formyl transferase AS588_07475 PF02911 Formyl transferase, C-terminal domain AS588_07480 PF01327 Polypeptide deformylase AS588_07485 PF00271 Helicase conserved C-terminal domain AS588_07485 PF04851 Type III restriction enzyme, res subunit AS588_07490 PF02441 Flavoprotein AS588_07490 PF04127 DNA / pantothenate metabolism flavoprotein AS588_07495 PF01192 RNA polymerase Rpb6 AS588_07500 PF00625 Guanylate kinase AS588_07505 PF04025 AS588_07505 AS588_07510 PF03755 AS588_07510 AS588_07510 PF08340 AS588_07510 AS588_07515 PF00122 E1-E2 ATPase AS588_07515 PF00689 Cation transporting ATPase, C-terminus AS588_07515 PF00690 Cation transporter/ATPase, N-terminus AS588_07515 PF00702 haloacid dehalogenase-like hydrolase AS588_07520 PF05670 AS588_07520 AS588_07520 PF05833 Fibronectin-binding protein A N-terminus (FbpA) AS588_07525 PF13241 Putative NAD(P)-binding AS588_07530 PF01903 CbiX AS588_07535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS588_07540 PF01583 Adenylylsulphate kinase AS588_07545 PF01747 ATP-sulfurylase AS588_07545 PF14306 PUA-like domain AS588_07550 PF01384 AS588_07550 AS588_07555 PF01507 Phosphoadenosine phosphosulfate reductase family AS588_07560 PF00156 Phosphoribosyl transferase domain AS588_07565 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AS588_07570 PF01180 Dihydroorotate dehydrogenase AS588_07575 PF00175 Oxidoreductase NAD-binding domain AS588_07575 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AS588_07580 PF02142 MGS-like domain AS588_07580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS588_07580 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AS588_07585 PF00117 Glutamine amidotransferase class-I AS588_07585 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AS588_07590 PF01979 Amidohydrolase family AS588_07595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AS588_07595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AS588_07600 PF00860 Permease family AS588_07605 PF00156 Phosphoribosyl transferase domain AS588_07610 PF00849 RNA pseudouridylate synthase AS588_07610 PF01479 S4 domain AS588_07615 PF01252 AS588_07615 AS588_07625 PF00133 tRNA synthetases class I (I, L, M and V) AS588_07625 PF08264 Anticodon-binding domain of tRNA AS588_07635 PF05103 DivIVA protein AS588_07640 PF01479 S4 domain AS588_07645 PF02325 AS588_07645 AS588_07650 PF04472 Protein of unknown function (DUF552) AS588_07655 PF01168 Alanine racemase, N-terminal domain AS588_07660 PF02578 Multi-copper polyphenol oxidoreductase laccase AS588_07665 PF05239 PRC-barrel domain AS588_07670 PF01546 Peptidase family M20/M25/M40 AS588_07670 PF07687 Peptidase dimerisation domain AS588_07675 PF00005 ABC transporter AS588_07680 PF04539 Sigma-70 region 3 AS588_07680 PF04542 Sigma-70 region 2 AS588_07680 PF04545 Sigma-70, region 4 AS588_07685 PF04542 Sigma-70 region 2 AS588_07685 PF04545 Sigma-70, region 4 AS588_07690 PF03419 AS588_07690 AS588_07695 PF00082 Subtilase family AS588_07695 PF05547 AS588_07695 AS588_07695 PF05922 Peptidase inhibitor I9 AS588_07695 PF13715 AS588_07695 AS588_07700 PF00091 Tubulin/FtsZ family, GTPase domain AS588_07700 PF12327 FtsZ family, C-terminal domain AS588_07705 PF02491 SHS2 domain inserted in FTSA AS588_07705 PF14450 Cell division protein FtsA AS588_07710 PF03799 Cell division protein FtsQ AS588_07710 PF08478 POTRA domain, FtsQ-type AS588_07715 PF01565 FAD binding domain AS588_07715 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AS588_07720 PF03033 Glycosyltransferase family 28 N-terminal domain AS588_07720 PF04101 Glycosyltransferase family 28 C-terminal domain AS588_07725 PF01098 AS588_07725 AS588_07730 PF02875 Mur ligase family, glutamate ligase domain AS588_07730 PF08245 Mur ligase middle domain AS588_07735 PF00953 Glycosyl transferase family 4 AS588_07735 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AS588_07740 PF01225 Mur ligase family, catalytic domain AS588_07740 PF02875 Mur ligase family, glutamate ligase domain AS588_07740 PF08245 Mur ligase middle domain AS588_07745 PF00905 Penicillin binding protein transpeptidase domain AS588_07745 PF03717 Penicillin-binding Protein dimerisation domain AS588_07745 PF03793 PASTA domain AS588_07750 PF00905 Penicillin binding protein transpeptidase domain AS588_07750 PF03717 Penicillin-binding Protein dimerisation domain AS588_07750 PF03793 PASTA domain AS588_07760 PF01795 MraW methylase family AS588_07765 PF02381 MraZ protein AS588_07770 PF10079 AS588_07770 AS588_07775 PF02558 Ketopantoate reductase PanE/ApbA AS588_07775 PF08546 Ketopantoate reductase PanE/ApbA C terminal AS588_07780 PF00583 Acetyltransferase (GNAT) family AS588_07785 PF13921 Myb-like DNA-binding domain AS588_07790 PF02620 AS588_07790 AS588_07795 PF05636 HIGH Nucleotidyl Transferase AS588_07800 PF05362 Lon protease (S16) C-terminal proteolytic domain AS588_07800 PF13180 PDZ domain AS588_07805 PF01734 Patatin-like phospholipase AS588_07810 PF07670 Nucleoside recognition AS588_07815 PF01467 Cytidylyltransferase AS588_07820 PF03602 Conserved hypothetical protein 95 AS588_07830 PF09902 AS588_07830 AS588_07835 PF06133 Protein of unknown function (DUF964) AS588_07840 PF14003 AS588_07840 AS588_07845 PF14071 AS588_07845 AS588_07850 PF00188 Cysteine-rich secretory protein family AS588_07850 PF14504 CAP-associated N-terminal AS588_07855 PF00571 CBS domain AS588_07860 PF08868 YugN-like family AS588_07865 PF09678 AS588_07865 AS588_07870 PF03626 AS588_07870 AS588_07875 PF00510 Cytochrome c oxidase subunit III AS588_07880 PF00115 Cytochrome C and Quinol oxidase polypeptide I AS588_07885 PF00034 Cytochrome c AS588_07885 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AS588_07885 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AS588_07890 PF01040 UbiA prenyltransferase family AS588_07895 PF02628 AS588_07895 AS588_07900 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AS588_07900 PF00364 Biotin-requiring enzyme AS588_07900 PF00682 HMGL-like AS588_07900 PF02436 Conserved carboxylase domain AS588_07900 PF02785 Biotin carboxylase C-terminal domain AS588_07900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS588_07905 PF01098 AS588_07905 AS588_07910 PF07408 Protein of unknown function (DUF1507) AS588_07915 PF04960 Glutaminase AS588_07925 PF02562 PhoH-like protein AS588_07925 PF13638 PIN domain AS588_07930 PF09580 AS588_07930 AS588_07935 PF09963 AS588_07935 AS588_07940 PF14036 AS588_07940 AS588_07945 PF00009 Elongation factor Tu GTP binding domain AS588_07945 PF00679 Elongation factor G C-terminus AS588_07945 PF03144 Elongation factor Tu domain 2 AS588_07945 PF14492 Elongation Factor G, domain II AS588_07950 PF17259 AS588_07950 AS588_07960 PF13490 Putative zinc-finger AS588_07965 PF01447 Thermolysin metallopeptidase, catalytic domain AS588_07965 PF02868 Thermolysin metallopeptidase, alpha-helical domain AS588_07965 PF03413 Peptidase propeptide and YPEB domain AS588_07965 PF07504 Fungalysin/Thermolysin Propeptide Motif AS588_07970 PF00583 Acetyltransferase (GNAT) family AS588_07975 PF00459 Inositol monophosphatase family AS588_07985 PF06335 Protein of unknown function (DUF1054) AS588_07990 PF05256 Uncharacterised protein family (UPF0223) AS588_08000 PF01276 Orn/Lys/Arg decarboxylase, major domain AS588_08000 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AS588_08005 PF01522 Polysaccharide deacetylase AS588_08015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS588_08015 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS588_08020 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS588_08020 PF00364 Biotin-requiring enzyme AS588_08020 PF02817 e3 binding domain AS588_08025 PF02779 Transketolase, pyrimidine binding domain AS588_08025 PF02780 Transketolase, C-terminal domain AS588_08030 PF00676 Dehydrogenase E1 component AS588_08035 PF00144 Beta-lactamase AS588_08040 PF00550 Phosphopantetheine attachment site AS588_08040 PF00561 alpha/beta hydrolase fold AS588_08040 PF08659 KR domain AS588_08040 PF14765 Polyketide synthase dehydratase AS588_08045 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_08045 PF00550 Phosphopantetheine attachment site AS588_08045 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_08045 PF08659 KR domain AS588_08045 PF16197 AS588_08045 AS588_08050 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_08050 PF00550 Phosphopantetheine attachment site AS588_08050 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_08050 PF08659 KR domain AS588_08050 PF14765 Polyketide synthase dehydratase AS588_08050 PF16197 AS588_08050 AS588_08055 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_08055 PF00550 Phosphopantetheine attachment site AS588_08055 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_08055 PF08659 KR domain AS588_08055 PF16197 AS588_08055 AS588_08060 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_08060 PF00550 Phosphopantetheine attachment site AS588_08060 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_08060 PF08659 KR domain AS588_08060 PF14765 Polyketide synthase dehydratase AS588_08060 PF16197 AS588_08060 AS588_08065 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_08065 PF00550 Phosphopantetheine attachment site AS588_08065 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_08065 PF08659 KR domain AS588_08065 PF14765 Polyketide synthase dehydratase AS588_08065 PF16197 AS588_08065 AS588_08070 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_08070 PF00550 Phosphopantetheine attachment site AS588_08070 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_08070 PF08659 KR domain AS588_08070 PF14765 Polyketide synthase dehydratase AS588_08070 PF16197 AS588_08070 AS588_08075 PF00698 Acyl transferase domain AS588_08080 PF10368 Putative cell-wall binding lipoprotein AS588_08085 PF09680 AS588_08085 AS588_08090 PF01327 Polypeptide deformylase AS588_08095 PF08282 haloacid dehalogenase-like hydrolase AS588_08100 PF07288 Protein of unknown function (DUF1447) AS588_08105 PF00753 Metallo-beta-lactamase superfamily AS588_08105 PF07521 RNA-metabolising metallo-beta-lactamase AS588_08110 PF01979 Amidohydrolase family AS588_08110 PF13382 Adenine deaminase C-terminal domain AS588_08115 PF02080 TrkA-C domain AS588_08115 PF02254 TrkA-N domain AS588_08120 PF06094 AIG2-like family AS588_08120 PF13772 AIG2-like family AS588_08125 PF00512 His Kinase A (phospho-acceptor) domain AS588_08125 PF00989 PAS fold AS588_08125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_08130 PF04014 Antidote-toxin recognition MazE AS588_08140 PF06723 MreB/Mbl protein AS588_08145 PF02073 Thermophilic metalloprotease (M29) AS588_08150 PF02558 Ketopantoate reductase PanE/ApbA AS588_08150 PF08546 Ketopantoate reductase PanE/ApbA C terminal AS588_08155 PF00005 ABC transporter AS588_08155 PF12848 ABC transporter AS588_08165 PF00717 Peptidase S24-like AS588_08170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS588_08170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS588_08175 PF00294 pfkB family carbohydrate kinase AS588_08180 PF00455 AS588_08180 AS588_08180 PF08220 DeoR-like helix-turn-helix domain AS588_08185 PF02687 AS588_08185 AS588_08185 PF12704 MacB-like periplasmic core domain AS588_08190 PF00005 ABC transporter AS588_08195 PF16576 AS588_08195 AS588_08200 PF04893 AS588_08200 AS588_08205 PF02597 ThiS family AS588_08210 PF02391 MoaE protein AS588_08215 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AS588_08220 PF00994 Probable molybdopterin binding domain AS588_08220 PF03453 MoeA N-terminal region (domain I and II) AS588_08220 PF03454 MoeA C-terminal region (domain IV) AS588_08225 PF00899 ThiF family AS588_08230 PF12804 MobA-like NTP transferase domain AS588_08245 PF00578 AhpC/TSA family AS588_08250 PF00924 Mechanosensitive ion channel AS588_08255 PF03698 AS588_08255 AS588_08260 PF01546 Peptidase family M20/M25/M40 AS588_08260 PF07687 Peptidase dimerisation domain AS588_08265 PF00132 Bacterial transferase hexapeptide (six repeats) AS588_08265 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AS588_08265 PF14602 Hexapeptide repeat of succinyl-transferase AS588_08270 PF00258 Flavodoxin AS588_08280 PF00258 Flavodoxin AS588_08285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_08285 PF03466 LysR substrate binding domain AS588_08295 PF14156 Antirepressor AbbA AS588_08300 PF04308 AS588_08300 AS588_08305 PF08796 Protein of unknown function (DUF1797) AS588_08310 PF00563 EAL domain AS588_08310 PF10388 EAL-domain associated signalling protein domain AS588_08320 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_08325 PF00149 Calcineurin-like phosphoesterase AS588_08330 PF01476 LysM domain AS588_08330 PF03734 L,D-transpeptidase catalytic domain AS588_08335 PF07690 Major Facilitator Superfamily AS588_08340 PF14177 AS588_08340 AS588_08345 PF00072 Response regulator receiver domain AS588_08345 PF01584 CheW-like domain AS588_08350 PF00155 Aminotransferase class I and II AS588_08355 PF00512 His Kinase A (phospho-acceptor) domain AS588_08355 PF00989 PAS fold AS588_08355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_08355 PF08447 PAS fold AS588_08360 PF00905 Penicillin binding protein transpeptidase domain AS588_08360 PF03717 Penicillin-binding Protein dimerisation domain AS588_08365 PF00188 Cysteine-rich secretory protein family AS588_08375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS588_08375 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AS588_08380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS588_08380 PF00672 HAMP domain AS588_08380 PF02743 Cache domain AS588_08390 PF11132 AS588_08390 AS588_08395 PF00391 PEP-utilising enzyme, mobile domain AS588_08395 PF02896 PEP-utilising enzyme, TIM barrel domain AS588_08395 PF05524 PEP-utilising enzyme, N-terminal AS588_08400 PF00381 PTS HPr component phosphorylation site AS588_08405 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AS588_08405 PF00367 phosphotransferase system, EIIB AS588_08405 PF02378 Phosphotransferase system, EIIC AS588_08410 PF00874 PRD domain AS588_08410 PF03123 CAT RNA binding domain AS588_08415 PF00356 Bacterial regulatory proteins, lacI family AS588_08415 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS588_08420 PF00557 Metallopeptidase family M24 AS588_08420 PF01321 Creatinase/Prolidase N-terminal domain AS588_08425 PF00122 E1-E2 ATPase AS588_08425 PF00702 haloacid dehalogenase-like hydrolase AS588_08430 PF00578 AhpC/TSA family AS588_08435 PF01943 AS588_08435 AS588_08435 PF14667 Polysaccharide biosynthesis C-terminal domain AS588_08440 PF07486 Cell Wall Hydrolase AS588_08450 PF09953 AS588_08450 AS588_08455 PF11514 Protein of unknown function (DUF3219) AS588_08460 PF14489 QueF-like protein AS588_08465 PF04055 Radical SAM superfamily AS588_08465 PF13394 4Fe-4S single cluster domain AS588_08470 PF01242 6-pyruvoyl tetrahydropterin synthase AS588_08475 PF06508 Queuosine biosynthesis protein QueC AS588_08490 PF00004 ATPase family associated with various cellular activities (AAA) AS588_08490 PF02151 UvrB/uvrC motif AS588_08490 PF07724 AAA domain (Cdc48 subfamily) AS588_08490 PF10431 C-terminal, D2-small domain, of ClpB protein AS588_08495 PF01618 AS588_08495 AS588_08500 PF00691 OmpA family AS588_08500 PF13677 AS588_08500 AS588_08505 PF01047 MarR family AS588_08510 PF00512 His Kinase A (phospho-acceptor) domain AS588_08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_08510 PF02743 Cache domain AS588_08515 PF09388 Spo0E like sporulation regulatory protein AS588_08520 PF03079 ARD/ARD' family AS588_08525 PF00596 Class II Aldolase and Adducin N-terminal domain AS588_08530 PF12710 haloacid dehalogenase-like hydrolase AS588_08535 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AS588_08535 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AS588_08540 PF00155 Aminotransferase class I and II AS588_08545 PF00795 Carbon-nitrogen hydrolase AS588_08550 PF01636 Phosphotransferase enzyme family AS588_08555 PF01008 Initiation factor 2 subunit family AS588_08560 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AS588_08560 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AS588_08565 PF00512 His Kinase A (phospho-acceptor) domain AS588_08565 PF00989 PAS fold AS588_08565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_08565 PF13188 PAS domain AS588_08565 PF13426 PAS domain AS588_08570 PF01757 AS588_08570 AS588_08575 PF04239 Protein of unknown function (DUF421) AS588_08580 PF02386 Cation transport protein AS588_08585 PF01435 Peptidase family M48 AS588_08590 PF08876 AS588_08590 AS588_08595 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS588_08600 PF12791 AS588_08600 AS588_08605 PF04542 Sigma-70 region 2 AS588_08610 PF03741 AS588_08610 AS588_08615 PF09335 AS588_08615 AS588_08625 PF02735 Ku70/Ku80 beta-barrel domain AS588_08630 PF01068 ATP dependent DNA ligase domain AS588_08640 PF01047 MarR family AS588_08645 PF13076 AS588_08645 AS588_08650 PF13411 MerR HTH family regulatory protein AS588_08655 PF00571 CBS domain AS588_08655 PF01769 Divalent cation transporter AS588_08655 PF03448 MgtE intracellular N domain AS588_08660 PF00704 Glycosyl hydrolases family 18 AS588_08660 PF01476 LysM domain AS588_08665 PF09819 AS588_08665 AS588_08670 PF00005 ABC transporter AS588_08675 PF02361 Cobalt transport protein AS588_08680 PF01740 STAS domain AS588_08685 PF00082 Subtilase family AS588_08690 PF01717 Cobalamin-independent synthase, Catalytic domain AS588_08690 PF08267 Cobalamin-independent synthase, N-terminal domain AS588_08695 PF00027 Cyclic nucleotide-binding domain AS588_08700 PF12832 MFS_1 like family AS588_08705 PF01391 Collagen triple helix repeat (20 copies) AS588_08710 PF00535 Glycosyl transferase family 2 AS588_08725 PF02566 OsmC-like protein AS588_08730 PF01047 MarR family AS588_08735 PF02566 OsmC-like protein AS588_08740 PF00171 Aldehyde dehydrogenase family AS588_08745 PF00696 Amino acid kinase family AS588_08745 PF01472 PUA domain AS588_08750 PF00551 Formyl transferase AS588_08750 PF01842 ACT domain AS588_08755 PF00893 Small Multidrug Resistance protein AS588_08760 PF00893 Small Multidrug Resistance protein AS588_08765 PF13302 Acetyltransferase (GNAT) domain AS588_08770 PF03061 Thioesterase superfamily AS588_08775 PF02274 Amidinotransferase AS588_08780 PF10282 Lactonase, 7-bladed beta-propeller AS588_08785 PF00005 ABC transporter AS588_08785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS588_08790 PF00877 NlpC/P60 family AS588_08795 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AS588_08795 PF13378 Enolase C-terminal domain-like AS588_08800 PF02016 LD-carboxypeptidase AS588_08805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS588_08810 PF00005 ABC transporter AS588_08810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS588_08815 PF00528 Binding-protein-dependent transport system inner membrane component AS588_08815 PF12911 AS588_08815 AS588_08820 PF00528 Binding-protein-dependent transport system inner membrane component AS588_08825 PF04951 D-aminopeptidase AS588_08830 PF07690 Major Facilitator Superfamily AS588_08835 PF13180 PDZ domain AS588_08835 PF13365 Trypsin-like peptidase domain AS588_08840 PF00535 Glycosyl transferase family 2 AS588_08845 PF13231 AS588_08845 AS588_08850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS588_08855 PF13520 Amino acid permease AS588_08860 PF01865 Protein of unknown function DUF47 AS588_08865 PF01384 AS588_08865 AS588_08870 PF14171 Toxin SpoIISA, type II toxin-antitoxin system AS588_08875 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system AS588_08880 PF01471 Putative peptidoglycan binding domain AS588_08880 PF01476 LysM domain AS588_08880 PF01510 N-acetylmuramoyl-L-alanine amidase AS588_08885 PF04688 AS588_08885 AS588_08890 PF10779 AS588_08890 AS588_08900 PF09693 AS588_08900 AS588_08905 PF09636 XkdW protein AS588_08920 PF10076 AS588_08920 AS588_08925 PF04865 AS588_08925 AS588_08930 PF10934 AS588_08930 AS588_08935 PF10844 AS588_08935 AS588_08945 PF01476 LysM domain AS588_08950 PF01464 Transglycosylase SLT domain AS588_08955 PF08890 Phage XkdN-like protein AS588_08960 PF09393 Protein of unknown function (DUF2001) AS588_08965 PF04984 Phage tail sheath protein AS588_08965 PF17481 AS588_08965 AS588_08965 PF17482 AS588_08965 AS588_08980 PF04883 AS588_08980 AS588_08985 PF12206 Domain of unknown function (DUF3599) AS588_08990 PF11436 Protein of unknown function (DUF3199) AS588_08995 PF05065 Phage capsid family AS588_09000 PF14550 AS588_09000 AS588_09005 PF04860 Phage portal protein AS588_09010 PF04466 Phage terminase large subunit AS588_09010 PF17288 AS588_09010 AS588_09015 PF03592 Terminase small subunit AS588_09015 PF10668 AS588_09015 AS588_09020 PF08281 Sigma-70, region 4 AS588_09025 PF17356 AS588_09025 AS588_09035 PF01695 IstB-like ATP binding protein AS588_09040 PF04703 FaeA-like protein AS588_09050 PF12844 Helix-turn-helix domain AS588_09055 PF06114 Domain of unknown function (DUF955) AS588_09060 PF05908 Protein of unknown function (DUF867) AS588_09065 PF08000 Bacterial PH domain AS588_09070 PF01471 Putative peptidoglycan binding domain AS588_09070 PF01476 LysM domain AS588_09070 PF01510 N-acetylmuramoyl-L-alanine amidase AS588_09075 PF13424 Tetratricopeptide repeat AS588_09080 PF05163 DinB family AS588_09085 PF01925 AS588_09085 AS588_09090 PF05147 Lanthionine synthetase C-like protein AS588_09090 PF13575 AS588_09090 AS588_09095 PF00005 ABC transporter AS588_09095 PF00664 ABC transporter transmembrane region AS588_09095 PF03412 Peptidase C39 family AS588_09100 PF05147 Lanthionine synthetase C-like protein AS588_09100 PF13575 AS588_09100 AS588_09110 PF00072 Response regulator receiver domain AS588_09110 PF00196 Bacterial regulatory proteins, luxR family AS588_09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_09125 PF12730 AS588_09125 AS588_09130 PF00005 ABC transporter AS588_09135 PF00512 His Kinase A (phospho-acceptor) domain AS588_09135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_09140 PF00072 Response regulator receiver domain AS588_09140 PF00486 Transcriptional regulatory protein, C terminal AS588_09145 PF04295 AS588_09145 AS588_09145 PF08666 SAF domain AS588_09150 PF01232 Mannitol dehydrogenase Rossmann domain AS588_09150 PF08125 Mannitol dehydrogenase C-terminal domain AS588_09155 PF00356 Bacterial regulatory proteins, lacI family AS588_09155 PF13377 Periplasmic binding protein-like domain AS588_09160 PF13347 MFS/sugar transport protein AS588_09165 PF02614 Glucuronate isomerase AS588_09170 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS588_09175 PF07849 AS588_09175 AS588_09180 PF07883 Cupin domain AS588_09185 PF13536 Multidrug resistance efflux transporter AS588_09190 PF00005 ABC transporter AS588_09195 PF03649 AS588_09195 AS588_09200 PF02602 Uroporphyrinogen-III synthase HemD AS588_09210 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AS588_09215 PF00067 Cytochrome P450 AS588_09220 PF07849 AS588_09220 AS588_09225 PF00384 Molybdopterin oxidoreductase AS588_09225 PF01568 Molydopterin dinucleotide binding domain AS588_09225 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS588_09225 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS588_09225 PF12838 4Fe-4S dicluster domain AS588_09225 PF13510 2Fe-2S iron-sulfur cluster binding domain AS588_09230 PF14172 AS588_09230 AS588_09235 PF10990 AS588_09235 AS588_09245 PF02308 AS588_09245 AS588_09250 PF01047 MarR family AS588_09260 PF13419 Haloacid dehalogenase-like hydrolase AS588_09265 PF00455 AS588_09265 AS588_09265 PF08220 DeoR-like helix-turn-helix domain AS588_09270 PF00232 Glycosyl hydrolase family 1 AS588_09275 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AS588_09280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS588_09280 PF02378 Phosphotransferase system, EIIC AS588_09285 PF00288 GHMP kinases N terminal domain AS588_09285 PF08544 GHMP kinases C terminal AS588_09285 PF10509 Galactokinase galactose-binding signature AS588_09290 PF01370 NAD dependent epimerase/dehydratase family AS588_09295 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AS588_09295 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AS588_09300 PF07745 Glycosyl hydrolase family 53 AS588_09305 PF01047 MarR family AS588_09310 PF07690 Major Facilitator Superfamily AS588_09315 PF03992 Antibiotic biosynthesis monooxygenase AS588_09320 PF13354 Beta-lactamase enzyme family AS588_09325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS588_09335 PF04740 AS588_09335 AS588_09335 PF14436 AS588_09335 AS588_09360 PF01471 Putative peptidoglycan binding domain AS588_09360 PF01476 LysM domain AS588_09360 PF01510 N-acetylmuramoyl-L-alanine amidase AS588_09365 PF05105 AS588_09365 AS588_09380 PF06605 Prophage endopeptidase tail AS588_09385 PF05709 Phage tail protein AS588_09400 PF12363 AS588_09400 AS588_09405 PF06199 AS588_09405 AS588_09410 PF11367 Protein of unknown function (DUF3168) AS588_09415 PF04883 AS588_09415 AS588_09420 PF05521 Phage head-tail joining protein AS588_09425 PF05135 Phage gp6-like head-tail connector protein AS588_09440 PF05065 Phage capsid family AS588_09445 PF14265 AS588_09445 AS588_09450 PF04233 AS588_09450 AS588_09455 PF05133 Phage portal protein, SPP1 Gp6-like AS588_09460 PF03237 Terminase-like family AS588_09465 PF10668 AS588_09465 AS588_09475 PF00112 Papain family cysteine protease AS588_09485 PF08281 Sigma-70, region 4 AS588_09495 PF02086 D12 class N6 adenine-specific DNA methyltransferase AS588_09510 PF17356 AS588_09510 AS588_09515 PF05866 Endodeoxyribonuclease RusA AS588_09520 PF01695 IstB-like ATP binding protein AS588_09525 PF07261 Replication initiation and membrane attachment AS588_09535 PF12684 PDDEXK-like domain of unknown function (DUF3799) AS588_09555 PF09466 Hypothetical protein Yqai AS588_09560 PF17448 AS588_09560 AS588_09565 PF01381 Helix-turn-helix AS588_09570 PF03374 AS588_09570 AS588_09570 PF09669 AS588_09570 AS588_09575 PF12728 Helix-turn-helix domain AS588_09580 PF01381 Helix-turn-helix AS588_09585 PF01381 Helix-turn-helix AS588_09590 PF09851 AS588_09590 AS588_09590 PF14470 Bacterial PH domain AS588_09595 PF06114 Domain of unknown function (DUF955) AS588_09600 PF00589 Phage integrase family AS588_09600 PF14659 Phage integrase, N-terminal SAM-like domain AS588_09610 PF01053 Cys/Met metabolism PLP-dependent enzyme AS588_09615 PF01053 Cys/Met metabolism PLP-dependent enzyme AS588_09620 PF00756 Putative esterase AS588_09625 PF13563 2'-5' RNA ligase superfamily AS588_09630 PF13673 Acetyltransferase (GNAT) domain AS588_09635 PF04014 Antidote-toxin recognition MazE AS588_09640 PF00005 ABC transporter AS588_09645 PF01061 AS588_09645 AS588_09650 PF00753 Metallo-beta-lactamase superfamily AS588_09660 PF00580 UvrD/REP helicase N-terminal domain AS588_09660 PF13361 UvrD-like helicase C-terminal domain AS588_09665 PF14069 AS588_09665 AS588_09670 PF09680 AS588_09670 AS588_09680 PF07098 AS588_09680 AS588_09685 PF07552 AS588_09685 AS588_09695 PF07552 AS588_09695 AS588_09700 PF10612 AS588_09700 AS588_09705 PF10612 AS588_09705 AS588_09710 PF14153 AS588_09710 AS588_09715 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_09720 PF08543 Phosphomethylpyrimidine kinase AS588_09725 PF00899 ThiF family AS588_09730 PF05690 Thiazole biosynthesis protein ThiG AS588_09735 PF02597 ThiS family AS588_09740 PF01266 FAD dependent oxidoreductase AS588_09745 PF02581 Thiamine monophosphate synthase/TENI AS588_09750 PF03070 TENA/THI-4/PQQC family AS588_09755 PF00999 Sodium/hydrogen exchanger family AS588_09755 PF02080 TrkA-C domain AS588_09755 PF02254 TrkA-N domain AS588_09760 PF00149 Calcineurin-like phosphoesterase AS588_09765 PF00849 RNA pseudouridylate synthase AS588_09770 PF01513 ATP-NAD kinase AS588_09775 PF04607 Region found in RelA / SpoT proteins AS588_09785 PF01928 CYTH domain AS588_09790 PF01464 Transglycosylase SLT domain AS588_09795 PF01152 Bacterial-like globin AS588_09800 PF13743 Thioredoxin AS588_09805 PF01432 Peptidase family M3 AS588_09805 PF08439 Oligopeptidase F AS588_09810 PF06054 AS588_09810 AS588_09815 PF05389 Negative regulator of genetic competence (MecA) AS588_09820 PF03741 AS588_09820 AS588_09825 PF03960 ArsC family AS588_09830 PF13508 Acetyltransferase (GNAT) domain AS588_09835 PF13200 AS588_09835 AS588_09840 PF00005 ABC transporter AS588_09840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS588_09845 PF00005 ABC transporter AS588_09845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS588_09850 PF00528 Binding-protein-dependent transport system inner membrane component AS588_09850 PF12911 AS588_09850 AS588_09855 PF00528 Binding-protein-dependent transport system inner membrane component AS588_09860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS588_09865 PF00579 tRNA synthetases class I (W and Y) AS588_09870 PF12227 AS588_09870 AS588_09875 PF00528 Binding-protein-dependent transport system inner membrane component AS588_09875 PF12911 AS588_09875 AS588_09880 PF00528 Binding-protein-dependent transport system inner membrane component AS588_09885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS588_09890 PF00005 ABC transporter AS588_09890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS588_09895 PF00005 ABC transporter AS588_09895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS588_09900 PF10026 AS588_09900 AS588_09905 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_09905 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_09910 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AS588_09910 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AS588_09920 PF10815 AS588_09920 AS588_09925 PF02608 Basic membrane protein AS588_09945 PF11151 AS588_09945 AS588_09950 PF14168 AS588_09950 AS588_09955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AS588_09955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AS588_09960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS588_09960 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AS588_09965 PF00117 Glutamine amidotransferase class-I AS588_09965 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AS588_09970 PF00202 Aminotransferase class-III AS588_09975 PF00696 Amino acid kinase family AS588_09980 PF01960 ArgJ family AS588_09985 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS588_09985 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS588_09990 PF07690 Major Facilitator Superfamily AS588_09995 PF01565 FAD binding domain AS588_10000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS588_10005 PF01883 Domain of unknown function DUF59 AS588_10010 PF00326 Prolyl oligopeptidase family AS588_10015 PF08282 haloacid dehalogenase-like hydrolase AS588_10020 PF12758 AS588_10020 AS588_10025 PF12690 Intracellular proteinase inhibitor AS588_10030 PF02588 AS588_10030 AS588_10030 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS588_10035 PF02645 Uncharacterised protein, DegV family COG1307 AS588_10040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS588_10040 PF00672 HAMP domain AS588_10045 PF02608 Basic membrane protein AS588_10050 PF13509 S1 domain AS588_10055 PF04461 Protein of unknown function (DUF520) AS588_10060 PF02219 Methylenetetrahydrofolate reductase AS588_10060 PF02574 Homocysteine S-methyltransferase AS588_10065 PF13673 Acetyltransferase (GNAT) domain AS588_10070 PF13599 Pentapeptide repeats (9 copies) AS588_10075 PF05163 DinB family AS588_10080 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS588_10080 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AS588_10085 PF00356 Bacterial regulatory proteins, lacI family AS588_10085 PF13377 Periplasmic binding protein-like domain AS588_10090 PF02311 AraC-like ligand binding domain AS588_10090 PF12833 Helix-turn-helix domain AS588_10095 PF01554 MatE AS588_10100 PF00494 Squalene/phytoene synthase AS588_10105 PF00733 Asparagine synthase AS588_10105 PF13537 Glutamine amidotransferase domain AS588_10110 PF10949 AS588_10110 AS588_10120 PF07457 AS588_10120 AS588_10125 PF01557 Fumarylacetoacetate (FAA) hydrolase family AS588_10130 PF09388 Spo0E like sporulation regulatory protein AS588_10135 PF10676 AS588_10135 AS588_10140 PF10803 AS588_10140 AS588_10145 PF10737 AS588_10145 AS588_10155 PF10970 AS588_10155 AS588_10160 PF10676 AS588_10160 AS588_10170 PF13476 AAA domain AS588_10170 PF13558 Putative exonuclease SbcCD, C subunit AS588_10175 PF00149 Calcineurin-like phosphoesterase AS588_10175 PF12320 Type 5 capsule protein repressor C-terminal domain AS588_10180 PF00580 UvrD/REP helicase N-terminal domain AS588_10180 PF12705 PD-(D/E)XK nuclease superfamily AS588_10180 PF13361 UvrD-like helicase C-terminal domain AS588_10185 PF12705 PD-(D/E)XK nuclease superfamily AS588_10190 PF04239 Protein of unknown function (DUF421) AS588_10195 PF02915 Rubrerythrin AS588_10200 PF00440 Bacterial regulatory proteins, tetR family AS588_10200 PF08360 QacR-like protein, C-terminal region AS588_10205 PF07690 Major Facilitator Superfamily AS588_10210 PF05145 AS588_10210 AS588_10215 PF01047 MarR family AS588_10220 PF01494 FAD binding domain AS588_10225 PF00717 Peptidase S24-like AS588_10230 PF09335 AS588_10230 AS588_10240 PF11755 AS588_10240 AS588_10245 PF00474 Sodium:solute symporter family AS588_10250 PF01906 Putative heavy-metal-binding AS588_10255 PF05901 AS588_10255 AS588_10260 PF15493 Domain of unknown function, YrpD AS588_10265 PF08818 Domain of unknown function (DU1801) AS588_10270 PF08818 Domain of unknown function (DU1801) AS588_10275 PF06338 AS588_10275 AS588_10280 PF08858 IDEAL domain AS588_10285 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_10290 PF00355 Rieske [2Fe-2S] domain AS588_10290 PF01266 FAD dependent oxidoreductase AS588_10295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS588_10295 PF11563 Protoglobin AS588_10300 PF02632 BioY family AS588_10305 PF00501 AMP-binding enzyme AS588_10305 PF13193 AMP-binding enzyme C-terminal domain AS588_10310 PF00108 Thiolase, N-terminal domain AS588_10310 PF02803 Thiolase, C-terminal domain AS588_10315 PF00300 Histidine phosphatase superfamily (branch 1) AS588_10320 PF01497 Periplasmic binding protein AS588_10330 PF00082 Subtilase family AS588_10330 PF05922 Peptidase inhibitor I9 AS588_10335 PF01435 Peptidase family M48 AS588_10335 PF16491 AS588_10335 AS588_10345 PF00501 AMP-binding enzyme AS588_10345 PF13193 AMP-binding enzyme C-terminal domain AS588_10350 PF13460 NADH(P)-binding AS588_10355 PF03099 Biotin/lipoate A/B protein ligase family AS588_10355 PF10437 Bacterial lipoate protein ligase C-terminus AS588_10360 PF12706 Beta-lactamase superfamily domain AS588_10365 PF00375 Sodium:dicarboxylate symporter family AS588_10370 PF05343 M42 glutamyl aminopeptidase AS588_10380 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AS588_10380 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AS588_10385 PF12698 ABC-2 family transporter protein AS588_10390 PF00440 Bacterial regulatory proteins, tetR family AS588_10395 PF01593 Flavin containing amine oxidoreductase AS588_10400 PF00762 Ferrochelatase AS588_10405 PF01208 Uroporphyrinogen decarboxylase (URO-D) AS588_10415 PF03992 Antibiotic biosynthesis monooxygenase AS588_10425 PF01546 Peptidase family M20/M25/M40 AS588_10425 PF07687 Peptidase dimerisation domain AS588_10430 PF12787 AS588_10430 AS588_10435 PF05975 AS588_10435 AS588_10440 PF00005 ABC transporter AS588_10445 PF01230 HIT domain AS588_10450 PF00266 Aminotransferase class-V AS588_10455 PF17099 AS588_10455 AS588_10465 PF12732 AS588_10465 AS588_10470 PF01047 MarR family AS588_10475 PF08963 Protein of unknown function (DUF1878) AS588_10485 PF11667 AS588_10485 AS588_10495 PF09680 AS588_10495 AS588_10500 PF05698 Bacterial trigger factor protein (TF) C-terminus AS588_10500 PF13616 PPIC-type PPIASE domain AS588_10505 PF14147 AS588_10505 AS588_10510 PF01966 HD domain AS588_10515 PF13514 AAA domain AS588_10520 PF00149 Calcineurin-like phosphoesterase AS588_10525 PF12698 ABC-2 family transporter protein AS588_10530 PF00005 ABC transporter AS588_10530 PF13732 AS588_10530 AS588_10535 PF14120 AS588_10535 AS588_10540 PF00378 Enoyl-CoA hydratase/isomerase family AS588_10550 PF02080 TrkA-C domain AS588_10555 PF00999 Sodium/hydrogen exchanger family AS588_10560 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AS588_10565 PF04055 Radical SAM superfamily AS588_10570 PF08282 haloacid dehalogenase-like hydrolase AS588_10575 PF08713 DNA alkylation repair enzyme AS588_10580 PF06133 Protein of unknown function (DUF964) AS588_10585 PF04286 AS588_10585 AS588_10590 PF14398 AS588_10590 AS588_10595 PF14398 AS588_10595 AS588_10600 PF17277 AS588_10600 AS588_10605 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS588_10610 PF13460 NADH(P)-binding AS588_10615 PF00005 ABC transporter AS588_10615 PF00664 ABC transporter transmembrane region AS588_10620 PF00005 ABC transporter AS588_10620 PF00664 ABC transporter transmembrane region AS588_10625 PF00582 Universal stress protein family AS588_10635 PF00440 Bacterial regulatory proteins, tetR family AS588_10635 PF13977 Bacterial transcriptional repressor AS588_10640 PF01063 Aminotransferase class IV AS588_10645 PF01522 Polysaccharide deacetylase AS588_10650 PF02146 Sir2 family AS588_10655 PF00924 Mechanosensitive ion channel AS588_10660 PF03009 Glycerophosphoryl diester phosphodiesterase family AS588_10665 PF02537 AS588_10665 AS588_10670 PF02537 AS588_10670 AS588_10675 PF00571 CBS domain AS588_10675 PF01595 AS588_10675 AS588_10675 PF03471 Transporter associated domain AS588_10680 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_10680 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_10685 PF00155 Aminotransferase class I and II AS588_10690 PF13411 MerR HTH family regulatory protein AS588_10695 PF00571 CBS domain AS588_10695 PF01595 AS588_10695 AS588_10695 PF03471 Transporter associated domain AS588_10700 PF01553 Acyltransferase AS588_10705 PF04542 Sigma-70 region 2 AS588_10705 PF08281 Sigma-70, region 4 AS588_10710 PF13791 AS588_10710 AS588_10710 PF13800 AS588_10710 AS588_10715 PF17453 AS588_10715 AS588_10720 PF00209 Sodium:neurotransmitter symporter family AS588_10725 PF13520 Amino acid permease AS588_10730 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_10735 PF00285 Citrate synthase AS588_10740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_10740 PF03466 LysR substrate binding domain AS588_10745 PF00877 NlpC/P60 family AS588_10745 PF01476 LysM domain AS588_10750 PF00245 Alkaline phosphatase AS588_10755 PF04293 AS588_10755 AS588_10760 PF05552 Conserved TM helix AS588_10765 PF02082 Transcriptional regulator AS588_10770 PF00877 NlpC/P60 family AS588_10770 PF01476 LysM domain AS588_10775 PF13028 Protein of unknown function (DUF3889) AS588_10780 PF14148 AS588_10780 AS588_10785 PF03358 NADPH-dependent FMN reductase AS588_10790 PF00072 Response regulator receiver domain AS588_10790 PF00196 Bacterial regulatory proteins, luxR family AS588_10795 PF07730 Histidine kinase AS588_10795 PF13185 GAF domain AS588_10800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AS588_10800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AS588_10800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AS588_10800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AS588_10805 PF01266 FAD dependent oxidoreductase AS588_10805 PF16901 AS588_10805 AS588_10810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS588_10810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS588_10815 PF00230 Major intrinsic protein AS588_10820 PF04309 Glycerol-3-phosphate responsive antiterminator AS588_10825 PF00202 Aminotransferase class-III AS588_10830 PF00583 Acetyltransferase (GNAT) family AS588_10830 PF00795 Carbon-nitrogen hydrolase AS588_10835 PF13419 Haloacid dehalogenase-like hydrolase AS588_10840 PF00571 CBS domain AS588_10845 PF17326 AS588_10845 AS588_10850 PF00849 RNA pseudouridylate synthase AS588_10860 PF00149 Calcineurin-like phosphoesterase AS588_10860 PF02872 5'-nucleotidase, C-terminal domain AS588_10865 PF07875 AS588_10865 AS588_10875 PF09580 AS588_10875 AS588_10885 PF00375 Sodium:dicarboxylate symporter family AS588_10890 PF00990 GGDEF domain AS588_10890 PF07694 5TMR of 5TMR-LYT AS588_10895 PF03180 NLPA lipoprotein AS588_10900 PF00313 'Cold-shock' DNA-binding domain AS588_10905 PF12679 AS588_10905 AS588_10910 PF00005 ABC transporter AS588_10915 PF00005 ABC transporter AS588_10920 PF00392 Bacterial regulatory proteins, gntR family AS588_10935 PF03358 NADPH-dependent FMN reductase AS588_10940 PF07690 Major Facilitator Superfamily AS588_10945 PF13437 HlyD family secretion protein AS588_10950 PF01047 MarR family AS588_10955 PF04285 AS588_10955 AS588_10960 PF06798 AS588_10960 AS588_10960 PF08298 PrkA AAA domain AS588_10970 PF04519 AS588_10970 AS588_10975 PF13171 AS588_10975 AS588_10980 PF00588 SpoU rRNA Methylase family AS588_10985 PF12671 AS588_10985 AS588_10990 PF08331 AS588_10990 AS588_10990 PF13484 AS588_10990 AS588_10990 PF13646 HEAT repeats AS588_11005 PF01381 Helix-turn-helix AS588_11015 PF00253 Ribosomal protein S14p/S29e AS588_11020 PF00296 Luciferase-like monooxygenase AS588_11025 PF00528 Binding-protein-dependent transport system inner membrane component AS588_11030 PF09084 NMT1/THI5 like AS588_11035 PF00005 ABC transporter AS588_11040 PF04909 Amidohydrolase AS588_11045 PF00199 Catalase AS588_11045 PF06628 Catalase-related immune-responsive AS588_11050 PF00005 ABC transporter AS588_11050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS588_11055 PF00005 ABC transporter AS588_11055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS588_11060 PF00528 Binding-protein-dependent transport system inner membrane component AS588_11060 PF12911 AS588_11060 AS588_11065 PF00528 Binding-protein-dependent transport system inner membrane component AS588_11070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS588_11075 PF13040 AS588_11075 AS588_11080 PF01565 FAD binding domain AS588_11080 PF08031 Berberine and berberine like AS588_11085 PF01964 ThiC family AS588_11085 PF13667 ThiC-associated domain AS588_11090 PF03575 Peptidase family S51 AS588_11095 PF03553 AS588_11095 AS588_11205 PF00083 Sugar (and other) transporter AS588_11210 PF00107 Zinc-binding dehydrogenase AS588_11210 PF08240 Alcohol dehydrogenase GroES-like domain AS588_11215 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AS588_11220 PF05067 Manganese containing catalase AS588_11225 PF13520 Amino acid permease AS588_11230 PF00440 Bacterial regulatory proteins, tetR family AS588_11235 PF00893 Small Multidrug Resistance protein AS588_11240 PF00893 Small Multidrug Resistance protein AS588_11245 PF07690 Major Facilitator Superfamily AS588_11250 PF00392 Bacterial regulatory proteins, gntR family AS588_11250 PF07729 FCD domain AS588_11255 PF00392 Bacterial regulatory proteins, gntR family AS588_11255 PF07702 UTRA domain AS588_11260 PF07690 Major Facilitator Superfamily AS588_11265 PF07563 Protein of unknown function (DUF1541) AS588_11285 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AS588_11290 PF00392 Bacterial regulatory proteins, gntR family AS588_11290 PF07729 FCD domain AS588_11295 PF00180 Isocitrate/isopropylmalate dehydrogenase AS588_11300 PF00561 alpha/beta hydrolase fold AS588_11305 PF00293 NUDIX domain AS588_11305 PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal AS588_11310 PF00892 EamA-like transporter family AS588_11315 PF13411 MerR HTH family regulatory protein AS588_11320 PF00583 Acetyltransferase (GNAT) family AS588_11325 PF01925 AS588_11325 AS588_11330 PF13560 Helix-turn-helix domain AS588_11335 PF00109 Beta-ketoacyl synthase, N-terminal domain AS588_11335 PF02801 Beta-ketoacyl synthase, C-terminal domain AS588_11340 PF07690 Major Facilitator Superfamily AS588_11345 PF00465 Iron-containing alcohol dehydrogenase AS588_11350 PF02588 AS588_11350 AS588_11350 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS588_11355 PF13302 Acetyltransferase (GNAT) domain AS588_11360 PF00005 ABC transporter AS588_11360 PF12848 ABC transporter AS588_11365 PF07722 Peptidase C26 AS588_11370 PF03176 MMPL family AS588_11375 PF00072 Response regulator receiver domain AS588_11375 PF00196 Bacterial regulatory proteins, luxR family AS588_11380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_11380 PF07730 Histidine kinase AS588_11395 PF07875 AS588_11395 AS588_11400 PF00107 Zinc-binding dehydrogenase AS588_11400 PF08240 Alcohol dehydrogenase GroES-like domain AS588_11400 PF13823 Alcohol dehydrogenase GroES-associated AS588_11410 PF07875 AS588_11410 AS588_11415 PF00440 Bacterial regulatory proteins, tetR family AS588_11415 PF16859 AS588_11415 AS588_11420 PF07690 Major Facilitator Superfamily AS588_11430 PF04299 Putative FMN-binding domain AS588_11435 PF00155 Aminotransferase class I and II AS588_11435 PF00392 Bacterial regulatory proteins, gntR family AS588_11440 PF03553 AS588_11440 AS588_11445 PF13411 MerR HTH family regulatory protein AS588_11450 PF00107 Zinc-binding dehydrogenase AS588_11450 PF08240 Alcohol dehydrogenase GroES-like domain AS588_11455 PF01758 Sodium Bile acid symporter family AS588_11465 PF04055 Radical SAM superfamily AS588_11475 PF00701 Dihydrodipicolinate synthetase family AS588_11485 PF06486 Protein of unknown function (DUF1093) AS588_11490 PF13738 Pyridine nucleotide-disulphide oxidoreductase AS588_11495 PF01545 Cation efflux family AS588_11495 PF16916 AS588_11495 AS588_11505 PF01565 FAD binding domain AS588_11505 PF08031 Berberine and berberine like AS588_11520 PF00293 NUDIX domain AS588_11525 PF07690 Major Facilitator Superfamily AS588_11530 PF00155 Aminotransferase class I and II AS588_11530 PF00392 Bacterial regulatory proteins, gntR family AS588_11535 PF01546 Peptidase family M20/M25/M40 AS588_11535 PF07687 Peptidase dimerisation domain AS588_11540 PF02311 AraC-like ligand binding domain AS588_11540 PF12833 Helix-turn-helix domain AS588_11545 PF01546 Peptidase family M20/M25/M40 AS588_11545 PF07687 Peptidase dimerisation domain AS588_11555 PF01042 Endoribonuclease L-PSP AS588_11560 PF00392 Bacterial regulatory proteins, gntR family AS588_11560 PF07729 FCD domain AS588_11565 PF00291 Pyridoxal-phosphate dependent enzyme AS588_11570 PF12867 DinB superfamily AS588_11575 PF01734 Patatin-like phospholipase AS588_11580 PF03551 Transcriptional regulator PadR-like family AS588_11585 PF11193 AS588_11585 AS588_11590 PF01177 Asp/Glu/Hydantoin racemase AS588_11595 PF01925 AS588_11595 AS588_11600 PF01206 Sulfurtransferase TusA AS588_11605 PF00581 Rhodanese-like domain AS588_11605 PF00753 Metallo-beta-lactamase superfamily AS588_11610 PF00581 Rhodanese-like domain AS588_11610 PF01206 Sulfurtransferase TusA AS588_11615 PF13686 DsrE/DsrF/DrsH-like family AS588_11620 PF02583 Metal-sensitive transcriptional repressor AS588_11625 PF00313 'Cold-shock' DNA-binding domain AS588_11630 PF13460 NADH(P)-binding AS588_11635 PF02082 Transcriptional regulator AS588_11640 PF04237 YjbR AS588_11645 PF01575 MaoC like domain AS588_11650 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) AS588_11655 PF01047 MarR family AS588_11660 PF02566 OsmC-like protein AS588_11665 PF07859 alpha/beta hydrolase fold AS588_11670 PF07690 Major Facilitator Superfamily AS588_11675 PF12146 Putative lysophospholipase AS588_11680 PF04740 AS588_11680 AS588_11680 PF14411 AS588_11680 AS588_11685 PF14567 SMI1-KNR4 cell-wall AS588_11690 PF08867 AS588_11690 AS588_11750 PF10263 AS588_11750 AS588_11755 PF00575 S1 RNA binding domain AS588_11755 PF09371 Tex-like protein N-terminal domain AS588_11755 PF12836 Helix-hairpin-helix motif AS588_11755 PF16921 AS588_11755 AS588_11760 PF07228 Stage II sporulation protein E (SpoIIE) AS588_11765 PF04539 Sigma-70 region 3 AS588_11765 PF04542 Sigma-70 region 2 AS588_11765 PF04545 Sigma-70, region 4 AS588_11770 PF13581 Histidine kinase-like ATPase domain AS588_11775 PF01740 STAS domain AS588_11780 PF07228 Stage II sporulation protein E (SpoIIE) AS588_11780 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain AS588_11785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_11790 PF01740 STAS domain AS588_11795 PF01740 STAS domain AS588_11795 PF08678 Rsbr N terminal AS588_11800 PF02452 PemK-like protein AS588_11805 PF01402 Ribbon-helix-helix protein, copG family AS588_11810 PF00842 Alanine racemase, C-terminal domain AS588_11810 PF01168 Alanine racemase, N-terminal domain AS588_11820 PF01648 4'-phosphopantetheinyl transferase superfamily AS588_11825 PF01694 Rhomboid family AS588_11830 PF03703 AS588_11830 AS588_11835 PF03703 AS588_11835 AS588_11840 PF00270 DEAD/DEAH box helicase AS588_11840 PF00271 Helicase conserved C-terminal domain AS588_11845 PF01225 Mur ligase family, catalytic domain AS588_11845 PF02875 Mur ligase family, glutamate ligase domain AS588_11845 PF08245 Mur ligase middle domain AS588_11850 PF01820 D-ala D-ala ligase N-terminus AS588_11850 PF07478 D-ala D-ala ligase C-terminus AS588_11855 PF00085 Thioredoxin AS588_11860 PF01545 Cation efflux family AS588_11860 PF16916 AS588_11860 AS588_11865 PF13076 AS588_11865 AS588_11870 PF02770 Acyl-CoA dehydrogenase, middle domain AS588_11870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS588_11870 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AS588_11880 PF12730 AS588_11880 AS588_11885 PF00005 ABC transporter AS588_11890 PF01594 AS588_11890 AS588_11895 PF00375 Sodium:dicarboxylate symporter family AS588_11900 PF00072 Response regulator receiver domain AS588_11900 PF04703 FaeA-like protein AS588_11905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_11905 PF13596 PAS domain AS588_11905 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AS588_11905 PF17203 AS588_11905 AS588_11910 PF03480 Bacterial extracellular solute-binding protein, family 7 AS588_11915 PF05067 Manganese containing catalase AS588_11920 PF16291 AS588_11920 AS588_11925 PF07883 Cupin domain AS588_11930 PF10685 AS588_11930 AS588_11935 PF12787 AS588_11935 AS588_11940 PF00893 Small Multidrug Resistance protein AS588_11945 PF17314 AS588_11945 AS588_11960 PF01566 AS588_11960 AS588_11990 PF00205 Thiamine pyrophosphate enzyme, central domain AS588_11990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS588_11990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS588_11995 PF00293 NUDIX domain AS588_12000 PF13520 Amino acid permease AS588_12005 PF03170 Bacterial cellulose synthase subunit AS588_12010 PF13641 Glycosyltransferase like family 2 AS588_12015 PF10096 AS588_12015 AS588_12020 PF00990 GGDEF domain AS588_12030 PF01131 DNA topoisomerase AS588_12030 PF01751 Toprim domain AS588_12035 PF01037 AsnC family AS588_12035 PF13404 AsnC-type helix-turn-helix domain AS588_12040 PF12823 AS588_12040 AS588_12045 PF10997 AS588_12045 AS588_12050 PF16242 AS588_12050 AS588_12055 PF13302 Acetyltransferase (GNAT) domain AS588_12060 PF07385 Protein of unknown function (DUF1498) AS588_12065 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_12070 PF00501 AMP-binding enzyme AS588_12070 PF13193 AMP-binding enzyme C-terminal domain AS588_12075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS588_12075 PF00874 PRD domain AS588_12075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS588_12075 PF05043 Mga helix-turn-helix domain AS588_12075 PF08279 HTH domain AS588_12080 PF00248 Aldo/keto reductase family AS588_12085 PF00905 Penicillin binding protein transpeptidase domain AS588_12085 PF03717 Penicillin-binding Protein dimerisation domain AS588_12085 PF05223 NTF2-like N-terminal transpeptidase domain AS588_12090 PF03992 Antibiotic biosynthesis monooxygenase AS588_12095 PF13129 AS588_12095 AS588_12100 PF13472 GDSL-like Lipase/Acylhydrolase family AS588_12105 PF01614 Bacterial transcriptional regulator AS588_12105 PF09339 IclR helix-turn-helix domain AS588_12110 PF02626 Allophanate hydrolase subunit 2 AS588_12115 PF02682 Allophanate hydrolase subunit 1 AS588_12120 PF07286 Protein of unknown function (DUF1445) AS588_12125 PF01566 AS588_12125 AS588_12130 PF03746 LamB/YcsF family AS588_12135 PF08282 haloacid dehalogenase-like hydrolase AS588_12140 PF07977 FabA-like domain AS588_12145 PF01232 Mannitol dehydrogenase Rossmann domain AS588_12145 PF08125 Mannitol dehydrogenase C-terminal domain AS588_12150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS588_12155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS588_12155 PF02378 Phosphotransferase system, EIIC AS588_12165 PF08220 DeoR-like helix-turn-helix domain AS588_12170 PF04234 CopC domain AS588_12170 PF05425 AS588_12170 AS588_12170 PF13115 AS588_12170 AS588_12175 PF07987 Domain of unkown function (DUF1775) AS588_12180 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_12185 PF06800 AS588_12185 AS588_12190 PF00171 Aldehyde dehydrogenase family AS588_12195 PF00202 Aminotransferase class-III AS588_12200 PF00155 Aminotransferase class I and II AS588_12200 PF00392 Bacterial regulatory proteins, gntR family AS588_12205 PF01022 Bacterial regulatory protein, arsR family AS588_12210 PF03992 Antibiotic biosynthesis monooxygenase AS588_12215 PF00881 Nitroreductase family AS588_12220 PF00440 Bacterial regulatory proteins, tetR family AS588_12225 PF07690 Major Facilitator Superfamily AS588_12230 PF01497 Periplasmic binding protein AS588_12235 PF00005 ABC transporter AS588_12240 PF01032 FecCD transport family AS588_12245 PF01032 FecCD transport family AS588_12250 PF00696 Amino acid kinase family AS588_12250 PF13840 ACT domain AS588_12255 PF11131 AS588_12255 AS588_12260 PF13424 Tetratricopeptide repeat AS588_12265 PF00512 His Kinase A (phospho-acceptor) domain AS588_12265 PF00672 HAMP domain AS588_12265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_12270 PF00072 Response regulator receiver domain AS588_12270 PF00486 Transcriptional regulatory protein, C terminal AS588_12275 PF02687 AS588_12275 AS588_12275 PF12704 MacB-like periplasmic core domain AS588_12280 PF00005 ABC transporter AS588_12285 PF03972 MmgE/PrpD family AS588_12290 PF01546 Peptidase family M20/M25/M40 AS588_12290 PF07687 Peptidase dimerisation domain AS588_12295 PF00005 ABC transporter AS588_12300 PF00528 Binding-protein-dependent transport system inner membrane component AS588_12305 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS588_12310 PF00583 Acetyltransferase (GNAT) family AS588_12315 PF00296 Luciferase-like monooxygenase AS588_12320 PF03845 AS588_12320 AS588_12325 PF05504 Spore germination B3/ GerAC like, C-terminal AS588_12330 PF03323 AS588_12330 AS588_12340 PF13229 Right handed beta helix region AS588_12345 PF00854 POT family AS588_12360 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AS588_12365 PF02441 Flavoprotein AS588_12370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_12370 PF03466 LysR substrate binding domain AS588_12375 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS588_12380 PF00528 Binding-protein-dependent transport system inner membrane component AS588_12385 PF00005 ABC transporter AS588_12395 PF01648 4'-phosphopantetheinyl transferase superfamily AS588_12400 PF00155 Aminotransferase class I and II AS588_12405 PF00975 Thioesterase domain AS588_12410 PF00501 AMP-binding enzyme AS588_12410 PF00550 Phosphopantetheine attachment site AS588_12410 PF00668 Condensation domain AS588_12410 PF00975 Thioesterase domain AS588_12410 PF13193 AMP-binding enzyme C-terminal domain AS588_12420 PF00501 AMP-binding enzyme AS588_12420 PF00550 Phosphopantetheine attachment site AS588_12420 PF00668 Condensation domain AS588_12420 PF13193 AMP-binding enzyme C-terminal domain AS588_12425 PF01638 HxlR-like helix-turn-helix AS588_12430 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AS588_12435 PF01380 SIS domain AS588_12440 PF14040 AS588_12440 AS588_12445 PF11033 Competence protein J (ComJ) AS588_12450 PF00232 Glycosyl hydrolase family 1 AS588_12455 PF10925 AS588_12455 AS588_12460 PF06271 AS588_12460 AS588_12465 PF00107 Zinc-binding dehydrogenase AS588_12465 PF08240 Alcohol dehydrogenase GroES-like domain AS588_12465 PF13823 Alcohol dehydrogenase GroES-associated AS588_12470 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS588_12470 PF07683 Cobalamin synthesis protein cobW C-terminal domain AS588_12475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS588_12475 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS588_12475 PF04324 BFD-like [2Fe-2S] binding domain AS588_12475 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS588_12480 PF00355 Rieske [2Fe-2S] domain AS588_12485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS588_12490 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS588_12495 PF13556 PucR C-terminal helix-turn-helix domain AS588_12500 PF00474 Sodium:solute symporter family AS588_12505 PF00171 Aldehyde dehydrogenase family AS588_12510 PF01619 Proline dehydrogenase AS588_12515 PF10127 AS588_12515 AS588_12520 PF05448 Acetyl xylan esterase (AXE1) AS588_12525 PF01202 Shikimate kinase AS588_12530 PF07690 Major Facilitator Superfamily AS588_12535 PF01261 Xylose isomerase-like TIM barrel AS588_12540 PF13238 AAA domain AS588_12545 PF12197 Bacillus cereus group antimicrobial protein AS588_12550 PF02540 NAD synthase AS588_12555 PF09347 Domain of unknown function (DUF1989) AS588_12560 PF00324 Amino acid permease AS588_12565 PF08892 AS588_12565 AS588_12570 PF01810 AS588_12570 AS588_12575 PF01047 MarR family AS588_12580 PF07690 Major Facilitator Superfamily AS588_12585 PF00056 lactate/malate dehydrogenase, NAD binding domain AS588_12585 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AS588_12590 PF00128 Alpha amylase, catalytic domain AS588_12590 PF16738 AS588_12590 AS588_12600 PF03606 AS588_12600 AS588_12605 PF01546 Peptidase family M20/M25/M40 AS588_12605 PF07687 Peptidase dimerisation domain AS588_12610 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AS588_12615 PF00528 Binding-protein-dependent transport system inner membrane component AS588_12620 PF00005 ABC transporter AS588_12620 PF00571 CBS domain AS588_12625 PF07690 Major Facilitator Superfamily AS588_12630 PF05816 AS588_12630 AS588_12635 PF14266 AS588_12635 AS588_12640 PF03741 AS588_12640 AS588_12645 PF02342 TerD domain AS588_12650 PF02342 TerD domain AS588_12655 PF02342 TerD domain AS588_12660 PF00296 Luciferase-like monooxygenase AS588_12665 PF00950 AS588_12665 AS588_12670 PF00005 ABC transporter AS588_12675 PF01297 Periplasmic solute binding protein family AS588_12680 PF00128 Alpha amylase, catalytic domain AS588_12685 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_12690 PF13424 Tetratricopeptide repeat AS588_12695 PF13539 D-alanyl-D-alanine carboxypeptidase AS588_12700 PF16244 AS588_12700 AS588_12705 PF16244 AS588_12705 AS588_12710 PF11611 Domain of unknown function (DUF4352) AS588_12710 PF17118 AS588_12710 AS588_12715 PF00248 Aldo/keto reductase family AS588_12720 PF02810 SEC-C motif AS588_12720 PF05225 helix-turn-helix, Psq domain AS588_12725 PF01674 Lipase (class 2) AS588_12735 PF00440 Bacterial regulatory proteins, tetR family AS588_12740 PF07690 Major Facilitator Superfamily AS588_12745 PF00266 Aminotransferase class-V AS588_12750 PF01470 Pyroglutamyl peptidase AS588_12755 PF00902 Sec-independent protein translocase protein (TatC) AS588_12760 PF02416 mttA/Hcf106 family AS588_12765 PF09423 PhoD-like phosphatase AS588_12765 PF16655 AS588_12765 AS588_12770 PF07486 Cell Wall Hydrolase AS588_12775 PF10710 AS588_12775 AS588_12780 PF00085 Thioredoxin AS588_12785 PF07681 AS588_12785 AS588_12790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS588_12795 PF00881 Nitroreductase family AS588_12800 PF01545 Cation efflux family AS588_12800 PF16916 AS588_12800 AS588_12805 PF15777 AS588_12805 AS588_12810 PF01636 Phosphotransferase enzyme family AS588_12815 PF00072 Response regulator receiver domain AS588_12815 PF08664 AS588_12815 AS588_12820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_12825 PF04960 Glutaminase AS588_12830 PF01235 AS588_12830 AS588_12835 PF02574 Homocysteine S-methyltransferase AS588_12840 PF00324 Amino acid permease AS588_12845 PF01063 Aminotransferase class IV AS588_12850 PF00375 Sodium:dicarboxylate symporter family AS588_12855 PF00581 Rhodanese-like domain AS588_12855 PF12368 AS588_12855 AS588_12865 PF02666 AS588_12865 AS588_12870 PF09335 AS588_12870 AS588_12875 PF01066 CDP-alcohol phosphatidyltransferase AS588_12880 PF02222 ATP-grasp domain AS588_12885 PF00465 Iron-containing alcohol dehydrogenase AS588_12890 PF01381 Helix-turn-helix AS588_12900 PF01471 Putative peptidoglycan binding domain AS588_12900 PF08924 Domain of unknown function (DUF1906) AS588_12910 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AS588_12910 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AS588_12915 PF10852 AS588_12915 AS588_12920 PF07690 Major Facilitator Superfamily AS588_12925 PF03009 Glycerophosphoryl diester phosphodiesterase family AS588_12930 PF10852 AS588_12930 AS588_12940 PF13520 Amino acid permease AS588_12955 PF17334 AS588_12955 AS588_12960 PF16219 AS588_12960 AS588_12970 PF12698 ABC-2 family transporter protein AS588_12975 PF12698 ABC-2 family transporter protein AS588_12980 PF00005 ABC transporter AS588_12985 PF00072 Response regulator receiver domain AS588_12985 PF00196 Bacterial regulatory proteins, luxR family AS588_12990 PF07730 Histidine kinase AS588_12995 PF13419 Haloacid dehalogenase-like hydrolase AS588_13000 PF00324 Amino acid permease AS588_13005 PF01047 MarR family AS588_13010 PF03788 AS588_13010 AS588_13015 PF04172 AS588_13015 AS588_13020 PF00248 Aldo/keto reductase family AS588_13025 PF16226 AS588_13025 AS588_13050 PF01380 SIS domain AS588_13050 PF13522 Glutamine amidotransferase domain AS588_13055 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AS588_13055 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AS588_13055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AS588_13055 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AS588_13060 PF07949 YbbR-like protein AS588_13065 PF02457 DisA bacterial checkpoint controller nucleotide-binding AS588_13070 PF13490 Putative zinc-finger AS588_13075 PF04542 Sigma-70 region 2 AS588_13075 PF08281 Sigma-70, region 4 AS588_13105 PF04463 AS588_13105 AS588_13110 PF00583 Acetyltransferase (GNAT) family AS588_13115 PF01380 SIS domain AS588_13120 PF00367 phosphotransferase system, EIIB AS588_13120 PF02378 Phosphotransferase system, EIIC AS588_13125 PF00144 Beta-lactamase AS588_13130 PF00933 Glycosyl hydrolase family 3 N terminal domain AS588_13130 PF01915 Glycosyl hydrolase family 3 C-terminal domain AS588_13135 PF07075 Protein of unknown function (DUF1343) AS588_13140 PF01497 Periplasmic binding protein AS588_13140 PF12833 Helix-turn-helix domain AS588_13145 PF01497 Periplasmic binding protein AS588_13150 PF01032 FecCD transport family AS588_13155 PF01032 FecCD transport family AS588_13160 PF00756 Putative esterase AS588_13165 PF01758 Sodium Bile acid symporter family AS588_13170 PF00916 AS588_13170 AS588_13170 PF01740 STAS domain AS588_13175 PF00107 Zinc-binding dehydrogenase AS588_13175 PF08240 Alcohol dehydrogenase GroES-like domain AS588_13180 PF00459 Inositol monophosphatase family AS588_13185 PF00202 Aminotransferase class-III AS588_13190 PF07690 Major Facilitator Superfamily AS588_13210 PF01522 Polysaccharide deacetylase AS588_13215 PF14089 AS588_13215 AS588_13225 PF10609 ParA/MinD ATPase like AS588_13230 PF01520 N-acetylmuramoyl-L-alanine amidase AS588_13235 PF10730 AS588_13235 AS588_13240 PF05163 DinB family AS588_13245 PF08241 Methyltransferase domain AS588_13250 PF00380 Ribosomal protein S9/S16 AS588_13255 PF00572 Ribosomal protein L13 AS588_13260 PF01416 tRNA pseudouridine synthase AS588_13265 PF02361 Cobalt transport protein AS588_13270 PF00005 ABC transporter AS588_13275 PF00005 ABC transporter AS588_13280 PF01196 Ribosomal protein L17 AS588_13285 PF01000 RNA polymerase Rpb3/RpoA insert domain AS588_13285 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AS588_13285 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AS588_13290 PF00411 Ribosomal protein S11 AS588_13295 PF00416 Ribosomal protein S13/S18 AS588_13300 PF00444 Ribosomal protein L36 AS588_13305 PF01176 Translation initiation factor 1A / IF-1 AS588_13310 PF00557 Metallopeptidase family M24 AS588_13315 PF00406 Adenylate kinase AS588_13315 PF05191 Adenylate kinase, active site lid AS588_13320 PF00344 SecY translocase AS588_13325 PF00828 Ribosomal protein L18e/L15 AS588_13330 PF00327 Ribosomal protein L30p/L7e AS588_13335 PF00333 Ribosomal protein S5, N-terminal domain AS588_13335 PF03719 Ribosomal protein S5, C-terminal domain AS588_13340 PF00861 Ribosomal L18p/L5e family AS588_13345 PF00347 Ribosomal protein L6 AS588_13350 PF00410 Ribosomal protein S8 AS588_13355 PF00281 Ribosomal protein L5 AS588_13355 PF00673 ribosomal L5P family C-terminus AS588_13360 PF00467 KOW motif AS588_13360 PF17136 AS588_13360 AS588_13365 PF00238 Ribosomal protein L14p/L23e AS588_13370 PF00366 Ribosomal protein S17 AS588_13375 PF00831 Ribosomal L29 protein AS588_13380 PF00252 Ribosomal protein L16p/L10e AS588_13385 PF00189 Ribosomal protein S3, C-terminal domain AS588_13385 PF07650 KH domain AS588_13390 PF00237 Ribosomal protein L22p/L17e AS588_13395 PF00203 Ribosomal protein S19 AS588_13400 PF00181 Ribosomal Proteins L2, RNA binding domain AS588_13400 PF03947 Ribosomal Proteins L2, C-terminal domain AS588_13405 PF00276 Ribosomal protein L23 AS588_13410 PF00573 Ribosomal protein L4/L1 family AS588_13415 PF00297 Ribosomal protein L3 AS588_13420 PF00338 Ribosomal protein S10p/S20e AS588_13425 PF12146 Putative lysophospholipase AS588_13430 PF00009 Elongation factor Tu GTP binding domain AS588_13430 PF03143 Elongation factor Tu C-terminal domain AS588_13430 PF03144 Elongation factor Tu domain 2 AS588_13435 PF00009 Elongation factor Tu GTP binding domain AS588_13435 PF00679 Elongation factor G C-terminus AS588_13435 PF03144 Elongation factor Tu domain 2 AS588_13435 PF03764 Elongation factor G, domain IV AS588_13435 PF14492 Elongation Factor G, domain II AS588_13440 PF00177 Ribosomal protein S7p/S5e AS588_13445 PF00164 Ribosomal protein S12/S23 AS588_13450 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AS588_13455 PF00623 RNA polymerase Rpb1, domain 2 AS588_13455 PF04983 RNA polymerase Rpb1, domain 3 AS588_13455 PF04997 RNA polymerase Rpb1, domain 1 AS588_13455 PF04998 RNA polymerase Rpb1, domain 5 AS588_13455 PF05000 RNA polymerase Rpb1, domain 4 AS588_13460 PF00562 RNA polymerase Rpb2, domain 6 AS588_13460 PF04560 RNA polymerase Rpb2, domain 7 AS588_13460 PF04561 RNA polymerase Rpb2, domain 2 AS588_13460 PF04563 RNA polymerase beta subunit AS588_13460 PF04565 RNA polymerase Rpb2, domain 3 AS588_13460 PF10385 RNA polymerase beta subunit external 1 domain AS588_13465 PF05175 Methyltransferase small domain AS588_13470 PF00542 Ribosomal protein L7/L12 C-terminal domain AS588_13470 PF16320 AS588_13470 AS588_13475 PF00466 Ribosomal protein L10 AS588_13480 PF00687 Ribosomal protein L1p/L10e family AS588_13485 PF00298 Ribosomal protein L11, RNA binding domain AS588_13485 PF03946 Ribosomal protein L11, N-terminal domain AS588_13490 PF00467 KOW motif AS588_13490 PF02357 Transcription termination factor nusG AS588_13495 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AS588_13500 PF00471 Ribosomal protein L33 AS588_13505 PF04542 Sigma-70 region 2 AS588_13505 PF08281 Sigma-70, region 4 AS588_13510 PF05991 AS588_13510 AS588_13515 PF00588 SpoU rRNA Methylase family AS588_13515 PF08032 RNA 2'-O ribose methyltransferase substrate binding AS588_13520 PF00636 Ribonuclease III domain AS588_13525 PF01406 tRNA synthetases class I (C) catalytic domain AS588_13525 PF09190 DALR domain AS588_13530 PF00132 Bacterial transferase hexapeptide (six repeats) AS588_13530 PF06426 Serine acetyltransferase, N-terminal AS588_13535 PF00749 tRNA synthetases class I (E and Q), catalytic domain AS588_13540 PF02542 YgbB family AS588_13545 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AS588_13555 PF02457 DisA bacterial checkpoint controller nucleotide-binding AS588_13555 PF10635 DisA bacterial checkpoint controller linker region AS588_13560 PF13481 AAA domain AS588_13560 PF13541 Subunit ChlI of Mg-chelatase AS588_13565 PF00004 ATPase family associated with various cellular activities (AAA) AS588_13565 PF02151 UvrB/uvrC motif AS588_13565 PF02861 Clp amino terminal domain AS588_13565 PF07724 AAA domain (Cdc48 subfamily) AS588_13565 PF10431 C-terminal, D2-small domain, of ClpB protein AS588_13570 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain AS588_13575 PF02151 UvrB/uvrC motif AS588_13580 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) AS588_13660 PF00152 tRNA synthetases class II (D, K and N) AS588_13660 PF01336 OB-fold nucleic acid binding domain AS588_13665 PF01207 Dihydrouridine synthase (Dus) AS588_13670 PF01381 Helix-turn-helix AS588_13675 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AS588_13680 PF02152 Dihydroneopterin aldolase AS588_13685 PF00809 Pterin binding enzyme AS588_13690 PF01063 Aminotransferase class IV AS588_13695 PF00117 Glutamine amidotransferase class-I AS588_13700 PF00425 chorismate binding enzyme AS588_13700 PF04715 Anthranilate synthase component I, N terminal region AS588_13705 PF00291 Pyridoxal-phosphate dependent enzyme AS588_13710 PF13145 PPIC-type PPIASE domain AS588_13710 PF13624 SurA N-terminal domain AS588_13715 PF01430 Hsp33 protein AS588_13720 PF03309 Type III pantothenate kinase AS588_13725 PF00004 ATPase family associated with various cellular activities (AAA) AS588_13725 PF01434 Peptidase family M41 AS588_13725 PF06480 FtsH Extracellular AS588_13730 PF00156 Phosphoribosyl transferase domain AS588_13735 PF01171 PP-loop family AS588_13735 PF09179 TilS substrate binding domain AS588_13735 PF11734 TilS substrate C-terminal domain AS588_13740 PF00069 Protein kinase domain AS588_13745 PF00092 von Willebrand factor type A domain AS588_13750 PF07228 Stage II sporulation protein E (SpoIIE) AS588_13765 PF00575 S1 RNA binding domain AS588_13770 PF04977 Septum formation initiator AS588_13775 PF09578 AS588_13775 AS588_13780 PF07873 YabP family AS588_13785 PF01479 S4 domain AS588_13790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS588_13790 PF03819 MazG nucleotide pyrophosphohydrolase domain AS588_13795 PF01943 AS588_13795 AS588_13795 PF14667 Polysaccharide biosynthesis C-terminal domain AS588_13800 PF04014 Antidote-toxin recognition MazE AS588_13800 PF15714 AS588_13800 AS588_13805 PF00270 DEAD/DEAH box helicase AS588_13805 PF00271 Helicase conserved C-terminal domain AS588_13805 PF02559 CarD-like/TRCF domain AS588_13805 PF03461 TRCF domain AS588_13810 PF10955 AS588_13810 AS588_13815 PF01195 Peptidyl-tRNA hydrolase AS588_13820 PF01386 Ribosomal L25p family AS588_13820 PF14693 Ribosomal protein TL5, C-terminal domain AS588_13825 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AS588_13825 PF14572 Phosphoribosyl synthetase-associated domain AS588_13830 PF00132 Bacterial transferase hexapeptide (six repeats) AS588_13830 PF00483 Nucleotidyl transferase AS588_13835 PF04026 SpoVG AS588_13840 PF01042 Endoribonuclease L-PSP AS588_13845 PF00156 Phosphoribosyl transferase domain AS588_13845 PF09182 Bacterial purine repressor, N-terminal AS588_13850 PF00288 GHMP kinases N terminal domain AS588_13850 PF08544 GHMP kinases C terminal AS588_13855 PF00269 Small, acid-soluble spore proteins, alpha/beta type AS588_13860 PF06257 Protein of unknown function (DUF1021) AS588_13865 PF05582 AS588_13865 AS588_13870 PF00398 Ribosomal RNA adenine dimethylase AS588_13875 PF13331 AS588_13875 AS588_13875 PF13662 Toprim domain AS588_13880 PF03990 AS588_13880 AS588_13880 PF06725 3D domain AS588_13880 PF07501 G5 domain AS588_13885 PF01026 TatD related DNase AS588_13890 PF01588 Putative tRNA binding domain AS588_13890 PF08264 Anticodon-binding domain of tRNA AS588_13890 PF09334 tRNA synthetases class I (M) AS588_13895 PF04014 Antidote-toxin recognition MazE AS588_13900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS588_13905 PF01541 GIY-YIG catalytic domain AS588_13910 PF05175 Methyltransferase small domain AS588_13915 PF06156 AS588_13915 AS588_13920 PF04468 AS588_13920 AS588_13925 PF09115 DNA polymerase III, delta subunit, C terminal AS588_13925 PF13177 DNA polymerase III, delta subunit AS588_13930 PF03885 Protein of unknown function (DUF327) AS588_13935 PF06153 Protein of unknown function (DUF970) AS588_13940 PF02223 Thymidylate kinase AS588_13945 PF01276 Orn/Lys/Arg decarboxylase, major domain AS588_13945 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AS588_13950 PF05816 AS588_13950 AS588_13955 PF10112 AS588_13955 AS588_13960 PF10764 AS588_13960 AS588_13990 PF07441 AS588_13990 AS588_13995 PF10704 AS588_13995 AS588_14000 PF02132 RecR protein AS588_14000 PF13662 Toprim domain AS588_14005 PF02575 YbaB/EbfC DNA-binding family AS588_14020 PF14437 AS588_14020 AS588_14025 PF00857 Isochorismatase family AS588_14030 PF00704 Glycosyl hydrolases family 18 AS588_14030 PF01476 LysM domain AS588_14035 PF01712 Deoxynucleoside kinase AS588_14040 PF01712 Deoxynucleoside kinase AS588_14050 PF02595 Glycerate kinase family AS588_14055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS588_14055 PF02403 Seryl-tRNA synthetase N-terminal domain AS588_14060 PF01174 SNO glutamine amidotransferase family AS588_14065 PF01680 SOR/SNZ family AS588_14070 PF00768 D-alanyl-D-alanine carboxypeptidase AS588_14070 PF07943 Penicillin-binding protein 5, C-terminal domain AS588_14075 PF00478 IMP dehydrogenase / GMP reductase domain AS588_14075 PF00571 CBS domain AS588_14080 PF14175 AS588_14080 AS588_14100 PF09515 Thiamine transporter protein (Thia_YuaJ) AS588_14105 PF01145 SPFH domain / Band 7 family AS588_14105 PF15975 AS588_14105 AS588_14115 PF12867 DinB superfamily AS588_14120 PF03473 MOSC domain AS588_14125 PF00465 Iron-containing alcohol dehydrogenase AS588_14130 PF00171 Aldehyde dehydrogenase family AS588_14145 PF02080 TrkA-C domain AS588_14145 PF02254 TrkA-N domain AS588_14150 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AS588_14150 PF13457 SH3-like domain AS588_14155 PF00042 Globin AS588_14155 PF00175 Oxidoreductase NAD-binding domain AS588_14155 PF00970 Oxidoreductase FAD-binding domain AS588_14160 PF00190 Cupin AS588_14175 PF13424 Tetratricopeptide repeat AS588_14195 PF02673 AS588_14195 AS588_14200 PF01594 AS588_14200 AS588_14205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS588_14210 PF01965 DJ-1/PfpI family AS588_14220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS588_14220 PF00672 HAMP domain AS588_14220 PF02743 Cache domain AS588_14225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS588_14225 PF00672 HAMP domain AS588_14225 PF02743 Cache domain AS588_14230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS588_14230 PF00672 HAMP domain AS588_14230 PF02743 Cache domain AS588_14245 PF03060 Nitronate monooxygenase AS588_14250 PF01894 Uncharacterised protein family UPF0047 AS588_14255 PF00128 Alpha amylase, catalytic domain AS588_14255 PF16657 AS588_14255 AS588_14260 PF00571 CBS domain AS588_14260 PF01595 AS588_14260 AS588_14260 PF03471 Transporter associated domain AS588_14265 PF04298 AS588_14265 AS588_14275 PF11458 Membrane-integrating protein Mistic AS588_14280 PF02254 TrkA-N domain AS588_14280 PF07885 Ion channel AS588_14285 PF08868 YugN-like family AS588_14295 PF00342 Phosphoglucose isomerase AS588_14305 PF00857 Isochorismatase family AS588_14310 PF00465 Iron-containing alcohol dehydrogenase AS588_14315 PF00465 Iron-containing alcohol dehydrogenase AS588_14320 PF04070 AS588_14320 AS588_14325 PF00575 S1 RNA binding domain AS588_14330 PF00155 Aminotransferase class I and II AS588_14335 PF01037 AsnC family AS588_14335 PF13412 Winged helix-turn-helix DNA-binding AS588_14340 PF00561 alpha/beta hydrolase fold AS588_14345 PF08958 Domain of unknown function (DUF1871) AS588_14350 PF00155 Aminotransferase class I and II AS588_14355 PF00512 His Kinase A (phospho-acceptor) domain AS588_14355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_14360 PF08810 Kinase associated protein B AS588_14365 PF00929 Exonuclease AS588_14370 PF07690 Major Facilitator Superfamily AS588_14375 PF00905 Penicillin binding protein transpeptidase domain AS588_14375 PF00912 Transglycosylase AS588_14380 PF04134 AS588_14380 AS588_14385 PF17328 AS588_14385 AS588_14390 PF00989 PAS fold AS588_14390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_14390 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AS588_14390 PF17203 AS588_14390 AS588_14395 PF00072 Response regulator receiver domain AS588_14400 PF02608 Basic membrane protein AS588_14405 PF00005 ABC transporter AS588_14410 PF02653 AS588_14410 AS588_14415 PF02653 AS588_14415 AS588_14425 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AS588_14425 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AS588_14425 PF13244 AS588_14425 AS588_14430 PF04039 AS588_14430 AS588_14435 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AS588_14440 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AS588_14445 PF01899 AS588_14445 AS588_14450 PF04066 AS588_14450 AS588_14455 PF03334 AS588_14455 AS588_14460 PF03061 Thioesterase superfamily AS588_14465 PF00072 Response regulator receiver domain AS588_14465 PF00196 Bacterial regulatory proteins, luxR family AS588_14470 PF07730 Histidine kinase AS588_14475 PF05952 AS588_14475 AS588_14480 PF00348 Polyprenyl synthetase AS588_14485 PF08181 AS588_14485 AS588_14495 PF00563 EAL domain AS588_14495 PF08668 HDOD domain AS588_14500 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AS588_14505 PF00857 Isochorismatase family AS588_14510 PF07997 Protein of unknown function (DUF1694) AS588_14515 PF14166 AS588_14515 AS588_14520 PF10676 AS588_14520 AS588_14525 PF01594 AS588_14525 AS588_14530 PF10842 AS588_14530 AS588_14535 PF01966 HD domain AS588_14540 PF00106 short chain dehydrogenase AS588_14545 PF17355 AS588_14545 AS588_14555 PF01580 FtsK/SpoIIIE family AS588_14555 PF12538 DNA transporter AS588_14560 PF10140 WXG100 protein secretion system (Wss), protein YukC AS588_14565 PF08817 WXG100 protein secretion system (Wss), protein YukD AS588_14570 PF06013 Proteins of 100 residues with WXG AS588_14575 PF06018 CodY GAF-like domain AS588_14575 PF13556 PucR C-terminal helix-turn-helix domain AS588_14580 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AS588_14580 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AS588_14585 PF10042 AS588_14585 AS588_14590 PF03621 MbtH-like protein AS588_14595 PF00501 AMP-binding enzyme AS588_14595 PF00550 Phosphopantetheine attachment site AS588_14595 PF00668 Condensation domain AS588_14595 PF00975 Thioesterase domain AS588_14595 PF13193 AMP-binding enzyme C-terminal domain AS588_14600 PF00550 Phosphopantetheine attachment site AS588_14600 PF00857 Isochorismatase family AS588_14605 PF00501 AMP-binding enzyme AS588_14605 PF13193 AMP-binding enzyme C-terminal domain AS588_14610 PF00425 chorismate binding enzyme AS588_14615 PF00106 short chain dehydrogenase AS588_14620 PF00756 Putative esterase AS588_14625 PF00174 Oxidoreductase molybdopterin binding domain AS588_14630 PF02632 BioY family AS588_14635 PF03553 AS588_14635 AS588_14635 PF13726 AS588_14635 AS588_14640 PF00883 Cytosol aminopeptidase family, catalytic domain AS588_14640 PF02789 Cytosol aminopeptidase family, N-terminal domain AS588_14645 PF02681 AS588_14645 AS588_14650 PF06725 3D domain AS588_14655 PF14068 AS588_14655 AS588_14660 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS588_14670 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS588_14675 PF00478 IMP dehydrogenase / GMP reductase domain AS588_14685 PF01944 AS588_14685 AS588_14690 PF00005 ABC transporter AS588_14700 PF09221 Bacteriocin class IId cyclical uberolysin-like AS588_14710 PF13411 MerR HTH family regulatory protein AS588_14715 PF00106 short chain dehydrogenase AS588_14720 PF01521 Iron-sulphur cluster biosynthesis AS588_14725 PF01678 Diaminopimelate epimerase AS588_14730 PF01773 Na+ dependent nucleoside transporter N-terminus AS588_14730 PF07662 Na+ dependent nucleoside transporter C-terminus AS588_14735 PF07293 AS588_14735 AS588_14740 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS588_14745 PF07315 Protein of unknown function (DUF1462) AS588_14750 PF01106 NifU-like domain AS588_14755 PF00326 Prolyl oligopeptidase family AS588_14755 PF07676 WD40-like Beta Propeller Repeat AS588_14760 PF00288 GHMP kinases N terminal domain AS588_14760 PF08544 GHMP kinases C terminal AS588_14765 PF00291 Pyridoxal-phosphate dependent enzyme AS588_14770 PF00742 Homoserine dehydrogenase AS588_14770 PF01842 ACT domain AS588_14770 PF03447 Homoserine dehydrogenase, NAD binding domain AS588_14780 PF04608 Phosphatidylglycerophosphatase A AS588_14785 PF13242 HAD-hyrolase-like AS588_14785 PF13344 Haloacid dehalogenase-like hydrolase AS588_14790 PF01934 Protein of unknown function DUF86 AS588_14795 PF06265 Protein of unknown function (DUF1027) AS588_14800 PF04055 Radical SAM superfamily AS588_14800 PF16881 AS588_14800 AS588_14805 PF01551 Peptidase family M23 AS588_14810 PF09560 AS588_14810 AS588_14815 PF00149 Calcineurin-like phosphoesterase AS588_14815 PF02872 5'-nucleotidase, C-terminal domain AS588_14820 PF01925 AS588_14820 AS588_14825 PF01904 Protein of unknown function DUF72 AS588_14835 PF01979 Amidohydrolase family AS588_14840 PF07905 AS588_14840 AS588_14840 PF13556 PucR C-terminal helix-turn-helix domain AS588_14850 PF07690 Major Facilitator Superfamily AS588_14855 PF00266 Aminotransferase class-V AS588_14860 PF01546 Peptidase family M20/M25/M40 AS588_14865 PF04231 Endonuclease I AS588_14870 PF00005 ABC transporter AS588_14870 PF08402 TOBE domain AS588_14875 PF00392 Bacterial regulatory proteins, gntR family AS588_14875 PF07702 UTRA domain AS588_14880 PF00294 pfkB family carbohydrate kinase AS588_14885 PF00528 Binding-protein-dependent transport system inner membrane component AS588_14890 PF00528 Binding-protein-dependent transport system inner membrane component AS588_14895 PF01547 Bacterial extracellular solute-binding protein AS588_14900 PF01380 SIS domain AS588_14905 PF13411 MerR HTH family regulatory protein AS588_14910 PF07853 AS588_14910 AS588_14915 PF01541 GIY-YIG catalytic domain AS588_14920 PF01266 FAD dependent oxidoreductase AS588_14930 PF01374 Glycosyl hydrolase family 46 AS588_14935 PF01458 Uncharacterized protein family (UPF0051) AS588_14940 PF01592 NifU-like N terminal domain AS588_14945 PF00266 Aminotransferase class-V AS588_14950 PF01458 Uncharacterized protein family (UPF0051) AS588_14955 PF00005 ABC transporter AS588_14960 PF02627 Carboxymuconolactone decarboxylase family AS588_14965 PF03180 NLPA lipoprotein AS588_14970 PF00528 Binding-protein-dependent transport system inner membrane component AS588_14975 PF00005 ABC transporter AS588_14975 PF09383 NIL domain AS588_14980 PF02036 SCP-2 sterol transfer family AS588_14985 PF00085 Thioredoxin AS588_14990 PF13155 Toprim-like AS588_14995 PF10830 AS588_14995 AS588_15000 PF01597 Glycine cleavage H-protein AS588_15005 PF03960 ArsC family AS588_15010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS588_15010 PF02770 Acyl-CoA dehydrogenase, middle domain AS588_15010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS588_15015 PF00108 Thiolase, N-terminal domain AS588_15015 PF02803 Thiolase, C-terminal domain AS588_15020 PF00378 Enoyl-CoA hydratase/isomerase family AS588_15020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS588_15020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS588_15025 PF14115 AS588_15025 AS588_15030 PF01619 Proline dehydrogenase AS588_15040 PF07875 AS588_15040 AS588_15045 PF01047 MarR family AS588_15050 PF07690 Major Facilitator Superfamily AS588_15055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_15055 PF03466 LysR substrate binding domain AS588_15060 PF06314 Acetoacetate decarboxylase (ADC) AS588_15065 PF02558 Ketopantoate reductase PanE/ApbA AS588_15065 PF08546 Ketopantoate reductase PanE/ApbA C terminal AS588_15070 PF10835 AS588_15070 AS588_15075 PF00005 ABC transporter AS588_15080 PF14039 AS588_15080 AS588_15085 PF01432 Peptidase family M3 AS588_15085 PF08439 Oligopeptidase F AS588_15090 PF00106 short chain dehydrogenase AS588_15095 PF00210 Ferritin-like domain AS588_15100 PF13180 PDZ domain AS588_15100 PF13365 Trypsin-like peptidase domain AS588_15105 PF00072 Response regulator receiver domain AS588_15105 PF00486 Transcriptional regulatory protein, C terminal AS588_15110 PF00512 His Kinase A (phospho-acceptor) domain AS588_15110 PF00672 HAMP domain AS588_15110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_15115 PF00440 Bacterial regulatory proteins, tetR family AS588_15120 PF00206 Lyase AS588_15120 PF10415 Fumarase C C-terminus AS588_15125 PF13113 AS588_15125 AS588_15130 PF03323 AS588_15130 AS588_15135 PF03845 AS588_15135 AS588_15140 PF05504 Spore germination B3/ GerAC like, C-terminal AS588_15145 PF00072 Response regulator receiver domain AS588_15145 PF00196 Bacterial regulatory proteins, luxR family AS588_15150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_15150 PF07730 Histidine kinase AS588_15155 PF09922 Cell wall-active antibiotics response protein (DUF2154) AS588_15160 PF13349 AS588_15160 AS588_15165 PF04012 AS588_15165 AS588_15175 PF07690 Major Facilitator Superfamily AS588_15180 PF01923 Cobalamin adenosyltransferase AS588_15185 PF00005 ABC transporter AS588_15190 PF01032 FecCD transport family AS588_15195 PF01497 Periplasmic binding protein AS588_15200 PF00106 short chain dehydrogenase AS588_15205 PF08450 SMP-30/Gluconolaconase/LRE-like region AS588_15210 PF00512 His Kinase A (phospho-acceptor) domain AS588_15210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_15215 PF00072 Response regulator receiver domain AS588_15215 PF00486 Transcriptional regulatory protein, C terminal AS588_15220 PF12645 AS588_15220 AS588_15225 PF04545 Sigma-70, region 4 AS588_15230 PF00190 Cupin AS588_15235 PF14184 AS588_15235 AS588_15240 PF00005 ABC transporter AS588_15245 PF01032 FecCD transport family AS588_15250 PF01032 FecCD transport family AS588_15255 PF01497 Periplasmic binding protein AS588_15260 PF04072 Leucine carboxyl methyltransferase AS588_15265 PF13520 Amino acid permease AS588_15270 PF09575 AS588_15270 AS588_15275 PF04307 AS588_15275 AS588_15280 PF00884 Sulfatase AS588_15285 PF12727 PBP superfamily domain AS588_15285 PF12728 Helix-turn-helix domain AS588_15290 PF13531 Bacterial extracellular solute-binding protein AS588_15295 PF00528 Binding-protein-dependent transport system inner membrane component AS588_15300 PF00072 Response regulator receiver domain AS588_15300 PF00196 Bacterial regulatory proteins, luxR family AS588_15305 PF07730 Histidine kinase AS588_15310 PF00005 ABC transporter AS588_15315 PF12698 ABC-2 family transporter protein AS588_15320 PF12698 ABC-2 family transporter protein AS588_15325 PF00248 Aldo/keto reductase family AS588_15335 PF00999 Sodium/hydrogen exchanger family AS588_15345 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS588_15345 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS588_15350 PF00175 Oxidoreductase NAD-binding domain AS588_15350 PF00258 Flavodoxin AS588_15350 PF00667 FAD binding domain AS588_15355 PF13245 Part of AAA domain AS588_15355 PF13538 UvrD-like helicase C-terminal domain AS588_15360 PF03458 AS588_15360 AS588_15365 PF13688 Metallo-peptidase family M12 AS588_15370 PF02600 Disulfide bond formation protein DsbB AS588_15375 PF13462 Thioredoxin AS588_15380 PF00122 E1-E2 ATPase AS588_15380 PF00403 Heavy-metal-associated domain AS588_15380 PF00702 haloacid dehalogenase-like hydrolase AS588_15385 PF00122 E1-E2 ATPase AS588_15385 PF00403 Heavy-metal-associated domain AS588_15385 PF00702 haloacid dehalogenase-like hydrolase AS588_15390 PF00403 Heavy-metal-associated domain AS588_15395 PF02583 Metal-sensitive transcriptional repressor AS588_15400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS588_15400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AS588_15405 PF02525 Flavodoxin-like fold AS588_15410 PF13560 Helix-turn-helix domain AS588_15415 PF07690 Major Facilitator Superfamily AS588_15420 PF02627 Carboxymuconolactone decarboxylase family AS588_15425 PF04909 Amidohydrolase AS588_15430 PF00296 Luciferase-like monooxygenase AS588_15435 PF00462 Glutaredoxin AS588_15440 PF00296 Luciferase-like monooxygenase AS588_15445 PF00005 ABC transporter AS588_15450 PF00528 Binding-protein-dependent transport system inner membrane component AS588_15455 PF00528 Binding-protein-dependent transport system inner membrane component AS588_15460 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS588_15465 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS588_15470 PF00583 Acetyltransferase (GNAT) family AS588_15475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_15475 PF03466 LysR substrate binding domain AS588_15480 PF00106 short chain dehydrogenase AS588_15485 PF01337 Barstar (barnase inhibitor) AS588_15505 PF01668 SmpB protein AS588_15510 PF00575 S1 RNA binding domain AS588_15510 PF00773 RNB domain AS588_15510 PF08206 Ribonuclease B OB domain AS588_15515 PF12146 Putative lysophospholipase AS588_15520 PF03840 Preprotein translocase SecG subunit AS588_15525 PF01381 Helix-turn-helix AS588_15530 PF13560 Helix-turn-helix domain AS588_15535 PF13560 Helix-turn-helix domain AS588_15540 PF01638 HxlR-like helix-turn-helix AS588_15545 PF00512 His Kinase A (phospho-acceptor) domain AS588_15545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_15550 PF00072 Response regulator receiver domain AS588_15550 PF00486 Transcriptional regulatory protein, C terminal AS588_15555 PF12730 AS588_15555 AS588_15565 PF00005 ABC transporter AS588_15570 PF00528 Binding-protein-dependent transport system inner membrane component AS588_15575 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AS588_15580 PF00528 Binding-protein-dependent transport system inner membrane component AS588_15585 PF00005 ABC transporter AS588_15585 PF00571 CBS domain AS588_15595 PF00528 Binding-protein-dependent transport system inner membrane component AS588_15600 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AS588_15605 PF00528 Binding-protein-dependent transport system inner membrane component AS588_15610 PF00005 ABC transporter AS588_15610 PF00571 CBS domain AS588_15615 PF12802 MarR family AS588_15620 PF01914 AS588_15620 AS588_15640 PF00583 Acetyltransferase (GNAT) family AS588_15645 PF07690 Major Facilitator Superfamily AS588_15650 PF01261 Xylose isomerase-like TIM barrel AS588_15655 PF02585 GlcNAc-PI de-N-acetylase AS588_15660 PF08889 AS588_15660 AS588_15665 PF13480 Acetyltransferase (GNAT) domain AS588_15670 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS588_15675 PF01370 NAD dependent epimerase/dehydratase family AS588_15680 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS588_15685 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS588_15685 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS588_15685 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS588_15690 PF02225 PA domain AS588_15690 PF04389 Peptidase family M28 AS588_15695 PF00113 Enolase, C-terminal TIM barrel domain AS588_15695 PF03952 Enolase, N-terminal domain AS588_15700 PF01676 Metalloenzyme superfamily AS588_15700 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AS588_15705 PF00121 Triosephosphate isomerase AS588_15710 PF00162 Phosphoglycerate kinase AS588_15720 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS588_15720 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AS588_15725 PF04198 Putative sugar-binding domain AS588_15730 PF00083 Sugar (and other) transporter AS588_15735 PF00392 Bacterial regulatory proteins, gntR family AS588_15735 PF13377 Periplasmic binding protein-like domain AS588_15740 PF00296 Luciferase-like monooxygenase AS588_15750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_15750 PF03466 LysR substrate binding domain AS588_15755 PF00892 EamA-like transporter family AS588_15760 PF00324 Amino acid permease AS588_15770 PF00356 Bacterial regulatory proteins, lacI family AS588_15770 PF13377 Periplasmic binding protein-like domain AS588_15780 PF08282 haloacid dehalogenase-like hydrolase AS588_15785 PF01380 SIS domain AS588_15785 PF01418 Helix-turn-helix domain, rpiR family AS588_15790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS588_15790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS588_15795 PF02447 AS588_15795 AS588_15800 PF02589 Uncharacterised ACR, YkgG family COG1556 AS588_15805 PF02589 Uncharacterised ACR, YkgG family COG1556 AS588_15805 PF11870 AS588_15805 AS588_15805 PF13183 4Fe-4S dicluster domain AS588_15810 PF02754 AS588_15810 AS588_15815 PF00155 Aminotransferase class I and II AS588_15820 PF00392 Bacterial regulatory proteins, gntR family AS588_15820 PF07729 FCD domain AS588_15825 PF02652 AS588_15825 AS588_15830 PF00309 AS588_15830 AS588_15830 PF04552 Sigma-54, DNA binding domain AS588_15830 PF04963 Sigma-54 factor, core binding domain AS588_15835 PF09628 YvfG protein AS588_15840 PF04230 AS588_15840 AS588_15845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS588_15850 PF00132 Bacterial transferase hexapeptide (six repeats) AS588_15855 PF02397 AS588_15855 AS588_15860 PF01943 AS588_15860 AS588_15860 PF14667 Polysaccharide biosynthesis C-terminal domain AS588_15865 PF00535 Glycosyl transferase family 2 AS588_15870 PF04230 AS588_15870 AS588_15875 PF00535 Glycosyl transferase family 2 AS588_15880 PF14897 AS588_15880 AS588_15885 PF00534 Glycosyl transferases group 1 AS588_15885 PF13439 Glycosyltransferase Family 4 AS588_15890 PF00535 Glycosyl transferase family 2 AS588_15895 PF00534 Glycosyl transferases group 1 AS588_15895 PF13477 Glycosyl transferase 4-like AS588_15900 PF02719 Polysaccharide biosynthesis protein AS588_15900 PF13727 CoA-binding domain AS588_15905 PF13614 AAA domain AS588_15910 PF02706 Chain length determinant protein AS588_15915 PF01381 Helix-turn-helix AS588_15915 PF08671 Anti-repressor SinI AS588_15920 PF00135 Carboxylesterase family AS588_15930 PF01872 RibD C-terminal domain AS588_15940 PF00583 Acetyltransferase (GNAT) family AS588_15945 PF05870 Phenolic acid decarboxylase (PAD) AS588_15950 PF07252 Protein of unknown function (DUF1433) AS588_15955 PF07252 Protein of unknown function (DUF1433) AS588_15965 PF07252 Protein of unknown function (DUF1433) AS588_15975 PF07252 Protein of unknown function (DUF1433) AS588_15995 PF00251 Glycosyl hydrolases family 32 N-terminal domain AS588_15995 PF08244 Glycosyl hydrolases family 32 C terminal AS588_16000 PF01306 LacY proton/sugar symporter AS588_16005 PF00356 Bacterial regulatory proteins, lacI family AS588_16005 PF13377 Periplasmic binding protein-like domain AS588_16010 PF00574 Clp protease AS588_16015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_16015 PF03466 LysR substrate binding domain AS588_16020 PF04303 PrpF protein AS588_16025 PF00083 Sugar (and other) transporter AS588_16030 PF03641 Possible lysine decarboxylase AS588_16035 PF03819 MazG nucleotide pyrophosphohydrolase domain AS588_16040 PF00916 AS588_16040 AS588_16040 PF01740 STAS domain AS588_16045 PF00484 Carbonic anhydrase AS588_16050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS588_16050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS588_16055 PF00545 ribonuclease AS588_16060 PF00797 N-acetyltransferase AS588_16065 PF00381 PTS HPr component phosphorylation site AS588_16070 PF02650 WhiA C-terminal HTH domain AS588_16070 PF10298 WhiA N-terminal LAGLIDADG-like domain AS588_16070 PF14527 WhiA LAGLIDADG-like domain AS588_16075 PF01933 Uncharacterised protein family UPF0052 AS588_16080 PF03668 AS588_16080 AS588_16085 PF00293 NUDIX domain AS588_16090 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS588_16095 PF00877 NlpC/P60 family AS588_16100 PF13432 Tetratricopeptide repeat AS588_16105 PF00512 His Kinase A (phospho-acceptor) domain AS588_16105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_16110 PF00072 Response regulator receiver domain AS588_16110 PF00486 Transcriptional regulatory protein, C terminal AS588_16120 PF00005 ABC transporter AS588_16120 PF00664 ABC transporter transmembrane region AS588_16125 PF01502 Phosphoribosyl-AMP cyclohydrolase AS588_16125 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AS588_16130 PF00977 Histidine biosynthesis protein AS588_16135 PF00977 Histidine biosynthesis protein AS588_16140 PF00117 Glutamine amidotransferase class-I AS588_16145 PF00475 Imidazoleglycerol-phosphate dehydratase AS588_16150 PF00815 Histidinol dehydrogenase AS588_16155 PF01634 ATP phosphoribosyltransferase AS588_16160 PF13393 Histidyl-tRNA synthetase AS588_16165 PF13529 Peptidase_C39 like family AS588_16170 PF14602 Hexapeptide repeat of succinyl-transferase AS588_16175 PF13419 Haloacid dehalogenase-like hydrolase AS588_16180 PF01790 AS588_16180 AS588_16185 PF02603 HPr Serine kinase N terminus AS588_16185 PF07475 HPr Serine kinase C-terminal domain AS588_16190 PF01979 Amidohydrolase family AS588_16195 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AS588_16200 PF00392 Bacterial regulatory proteins, gntR family AS588_16200 PF07702 UTRA domain AS588_16205 PF00440 Bacterial regulatory proteins, tetR family AS588_16210 PF00149 Calcineurin-like phosphoesterase AS588_16210 PF00932 Lamin Tail Domain AS588_16215 PF04020 AS588_16215 AS588_16220 PF04024 AS588_16220 AS588_16225 PF13349 AS588_16225 AS588_16240 PF00005 ABC transporter AS588_16245 PF00271 Helicase conserved C-terminal domain AS588_16245 PF02151 UvrB/uvrC motif AS588_16245 PF04851 Type III restriction enzyme, res subunit AS588_16245 PF12344 Ultra-violet resistance protein B AS588_16250 PF09964 AS588_16250 AS588_16255 PF00391 PEP-utilising enzyme, mobile domain AS588_16255 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AS588_16260 PF00440 Bacterial regulatory proteins, tetR family AS588_16265 PF07690 Major Facilitator Superfamily AS588_16275 PF00872 AS588_16275 AS588_16285 PF12725 AS588_16285 AS588_16295 PF17423 AS588_16295 AS588_16300 PF01471 Putative peptidoglycan binding domain AS588_16300 PF03572 Peptidase family S41 AS588_16300 PF13180 PDZ domain AS588_16305 PF13229 Right handed beta helix region AS588_16310 PF02687 AS588_16310 AS588_16315 PF00005 ABC transporter AS588_16320 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AS588_16325 PF02588 AS588_16325 AS588_16325 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS588_16330 PF00472 RF-1 domain AS588_16330 PF03462 PCRF domain AS588_16335 PF01043 SecA preprotein cross-linking domain AS588_16335 PF02810 SEC-C motif AS588_16335 PF07516 SecA Wing and Scaffold domain AS588_16335 PF07517 SecA DEAD-like domain AS588_16340 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AS588_16340 PF16321 AS588_16340 AS588_16355 PF02561 Flagellar protein FliS AS588_16360 PF02465 AS588_16360 AS588_16360 PF07195 AS588_16360 AS588_16360 PF07196 Flagellin hook IN motif AS588_16365 PF00669 Bacterial flagellin N-terminal helical region AS588_16365 PF00700 Bacterial flagellin C-terminal helical region AS588_16370 PF02599 Global regulator protein family AS588_16375 PF02623 FliW protein AS588_16385 PF00669 Bacterial flagellin N-terminal helical region AS588_16390 PF00460 Flagella basal body rod protein AS588_16390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS588_16395 PF05130 FlgN protein AS588_16400 PF04316 Anti-sigma-28 factor, FlgM AS588_16410 PF00156 Phosphoribosyl transferase domain AS588_16415 PF10719 AS588_16415 AS588_16420 PF00271 Helicase conserved C-terminal domain AS588_16420 PF04851 Type III restriction enzyme, res subunit AS588_16425 PF02645 Uncharacterised protein, DegV family COG1307 AS588_16430 PF00072 Response regulator receiver domain AS588_16430 PF00196 Bacterial regulatory proteins, luxR family AS588_16435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_16435 PF05384 AS588_16435 AS588_16435 PF07730 Histidine kinase AS588_16440 PF01205 Uncharacterized protein family UPF0029 AS588_16440 PF09186 Domain of unknown function (DUF1949) AS588_16445 PF03816 Cell envelope-related transcriptional attenuator domain AS588_16450 PF00953 Glycosyl transferase family 4 AS588_16455 PF13692 Glycosyl transferases group 1 AS588_16460 PF00535 Glycosyl transferase family 2 AS588_16470 PF04932 AS588_16470 AS588_16475 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS588_16475 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS588_16475 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS588_16480 PF00534 Glycosyl transferases group 1 AS588_16480 PF13439 Glycosyltransferase Family 4 AS588_16485 PF13440 AS588_16485 AS588_16490 PF02397 AS588_16490 AS588_16495 PF01520 N-acetylmuramoyl-L-alanine amidase AS588_16495 PF04122 AS588_16495 AS588_16500 PF04122 AS588_16500 AS588_16500 PF08486 AS588_16500 AS588_16510 PF03816 Cell envelope-related transcriptional attenuator domain AS588_16515 PF02350 UDP-N-acetylglucosamine 2-epimerase AS588_16520 PF00483 Nucleotidyl transferase AS588_16525 PF00005 ABC transporter AS588_16530 PF01061 AS588_16530 AS588_16535 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AS588_16540 PF00535 Glycosyl transferase family 2 AS588_16545 PF01467 Cytidylyltransferase AS588_16550 PF03808 AS588_16550 AS588_16555 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AS588_16560 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AS588_16560 PF05036 Sporulation related domain AS588_16560 PF08239 Bacterial SH3 domain AS588_16565 PF01238 Phosphomannose isomerase type I AS588_16570 PF03323 AS588_16570 AS588_16575 PF03845 AS588_16575 AS588_16580 PF05504 Spore germination B3/ GerAC like, C-terminal AS588_16585 PF00535 Glycosyl transferase family 2 AS588_16585 PF13489 Methyltransferase domain AS588_16590 PF00083 Sugar (and other) transporter AS588_16595 PF03816 Cell envelope-related transcriptional attenuator domain AS588_16600 PF08282 haloacid dehalogenase-like hydrolase AS588_16610 PF00877 NlpC/P60 family AS588_16615 PF09587 Bacterial capsule synthesis protein PGA_cap AS588_16620 PF14102 AS588_16620 AS588_16625 PF08245 Mur ligase middle domain AS588_16630 PF03323 AS588_16630 AS588_16635 PF03845 AS588_16635 AS588_16640 PF05504 Spore germination B3/ GerAC like, C-terminal AS588_16645 PF00356 Bacterial regulatory proteins, lacI family AS588_16645 PF13377 Periplasmic binding protein-like domain AS588_16650 PF00294 pfkB family carbohydrate kinase AS588_16655 PF05025 RbsD / FucU transport protein family AS588_16660 PF00005 ABC transporter AS588_16665 PF02653 AS588_16665 AS588_16670 PF13407 Periplasmic binding protein domain AS588_16675 PF08239 Bacterial SH3 domain AS588_16680 PF02525 Flavodoxin-like fold AS588_16685 PF03306 Alpha-acetolactate decarboxylase AS588_16690 PF00205 Thiamine pyrophosphate enzyme, central domain AS588_16690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS588_16690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS588_16695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_16695 PF03466 LysR substrate binding domain AS588_16700 PF02040 AS588_16700 AS588_16715 PF08757 AS588_16715 AS588_16725 PF01613 Flavin reductase like domain AS588_16730 PF13789 AS588_16730 AS588_16735 PF01019 Gamma-glutamyltranspeptidase AS588_16740 PF01037 AsnC family AS588_16740 PF13404 AsnC-type helix-turn-helix domain AS588_16745 PF02417 AS588_16745 AS588_16750 PF02417 AS588_16750 AS588_16760 PF03358 NADPH-dependent FMN reductase AS588_16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_16765 PF03466 LysR substrate binding domain AS588_16770 PF04493 Endonuclease V AS588_16785 PF09346 SMI1 / KNR4 family (SUKH-1) AS588_16810 PF04740 AS588_16810 AS588_16810 PF14449 AS588_16810 AS588_16815 PF17279 AS588_16815 AS588_16820 PF16888 AS588_16820 AS588_16825 PF09234 Domain of unknown function (DUF1963) AS588_16830 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS588_16830 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS588_16830 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS588_16840 PF13614 AAA domain AS588_16845 PF02706 Chain length determinant protein AS588_16855 PF00176 SNF2 family N-terminal domain AS588_16855 PF00271 Helicase conserved C-terminal domain AS588_16855 PF12419 AS588_16855 AS588_16860 PF08282 haloacid dehalogenase-like hydrolase AS588_16865 PF00455 AS588_16865 AS588_16865 PF08220 DeoR-like helix-turn-helix domain AS588_16870 PF00436 Single-strand binding protein family AS588_16880 PF14183 AS588_16880 AS588_16885 PF01741 Large-conductance mechanosensitive channel, MscL AS588_16890 PF07977 FabA-like domain AS588_16895 PF13424 Tetratricopeptide repeat AS588_16900 PF00460 Flagella basal body rod protein AS588_16900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS588_16905 PF00460 Flagella basal body rod protein AS588_16905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AS588_16910 PF06723 MreB/Mbl protein AS588_16915 PF12116 Stage III sporulation protein D AS588_16920 PF01047 MarR family AS588_16925 PF07690 Major Facilitator Superfamily AS588_16930 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AS588_16935 PF07690 Major Facilitator Superfamily AS588_16940 PF00857 Isochorismatase family AS588_16945 PF00909 Ammonium Transporter Family AS588_16950 PF00543 Nitrogen regulatory protein P-II AS588_16955 PF01098 AS588_16955 AS588_16960 PF01569 PAP2 superfamily AS588_16965 PF04892 AS588_16965 AS588_16970 PF01551 Peptidase family M23 AS588_16975 PF00583 Acetyltransferase (GNAT) family AS588_16980 PF17319 AS588_16980 AS588_16985 PF17370 AS588_16985 AS588_16990 PF13091 PLD-like domain AS588_16990 PF13396 AS588_16990 AS588_16995 PF17319 AS588_16995 AS588_17000 PF00457 Glycosyl hydrolases family 11 AS588_17010 PF02082 Transcriptional regulator AS588_17015 PF00449 Urease alpha-subunit, N-terminal domain AS588_17015 PF01979 Amidohydrolase family AS588_17020 PF00699 Urease beta subunit AS588_17025 PF00547 Urease, gamma subunit AS588_17030 PF05532 CsbD-like AS588_17040 PF13424 Tetratricopeptide repeat AS588_17045 PF04055 Radical SAM superfamily AS588_17045 PF06463 Molybdenum Cofactor Synthesis C AS588_17045 PF13353 4Fe-4S single cluster domain AS588_17050 PF02634 FdhD/NarQ family AS588_17055 PF00092 von Willebrand factor type A domain AS588_17060 PF00092 von Willebrand factor type A domain AS588_17065 PF08486 AS588_17065 AS588_17070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AS588_17075 PF08680 Protein of unknown function (DUF1779) AS588_17080 PF06612 AS588_17080 AS588_17090 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AS588_17090 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AS588_17095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS588_17095 PF02874 ATP synthase alpha/beta family, beta-barrel domain AS588_17100 PF00231 ATP synthase AS588_17105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS588_17105 PF00306 ATP synthase alpha/beta chain, C terminal domain AS588_17105 PF02874 ATP synthase alpha/beta family, beta-barrel domain AS588_17110 PF00213 ATP synthase delta (OSCP) subunit AS588_17115 PF00430 ATP synthase B/B' CF(0) AS588_17120 PF00137 ATP synthase subunit C AS588_17125 PF00119 ATP synthase A chain AS588_17130 PF03899 AS588_17130 AS588_17135 PF14681 Uracil phosphoribosyltransferase AS588_17140 PF00464 Serine hydroxymethyltransferase AS588_17145 PF04260 Protein of unknown function (DUF436) AS588_17150 PF02502 Ribose/Galactose Isomerase AS588_17155 PF01451 Low molecular weight phosphotyrosine protein phosphatase AS588_17160 PF02659 AS588_17160 AS588_17165 PF01300 Telomere recombination AS588_17165 PF03481 Putative GTP-binding controlling metal-binding AS588_17175 PF09551 AS588_17175 AS588_17180 PF17094 AS588_17180 AS588_17185 PF17247 AS588_17185 AS588_17190 PF05175 Methyltransferase small domain AS588_17195 PF00472 RF-1 domain AS588_17195 PF03462 PCRF domain AS588_17200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS588_17205 PF13411 MerR HTH family regulatory protein AS588_17210 PF03547 AS588_17210 AS588_17215 PF00390 Malic enzyme, N-terminal domain AS588_17215 PF03949 Malic enzyme, NAD binding domain AS588_17220 PF00265 Thymidine kinase AS588_17225 PF01197 Ribosomal protein L31 AS588_17230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS588_17230 PF07497 Rho termination factor, RNA-binding domain AS588_17230 PF07498 Rho termination factor, N-terminal domain AS588_17235 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AS588_17240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AS588_17245 PF00923 Transaldolase AS588_17250 PF01116 Fructose-bisphosphate aldolase class-II AS588_17255 PF00072 Response regulator receiver domain AS588_17260 PF10740 Protein of unknown function (DUF2529) AS588_17265 PF00117 Glutamine amidotransferase class-I AS588_17265 PF06418 CTP synthase N-terminus AS588_17270 PF05066 HB1, ASXL, restriction endonuclease HTH domain AS588_17275 PF02754 AS588_17275 AS588_17275 PF13183 4Fe-4S dicluster domain AS588_17280 PF13091 PLD-like domain AS588_17285 PF03851 UV-endonuclease UvdE AS588_17295 PF00005 ABC transporter AS588_17295 PF00664 ABC transporter transmembrane region AS588_17300 PF13091 PLD-like domain AS588_17300 PF13396 AS588_17300 AS588_17305 PF02588 AS588_17305 AS588_17310 PF02665 Nitrate reductase gamma subunit AS588_17315 PF02613 Nitrate reductase delta subunit AS588_17320 PF13247 4Fe-4S dicluster domain AS588_17320 PF14711 Respiratory nitrate reductase beta C-terminal AS588_17335 PF14256 AS588_17335 AS588_17340 PF00027 Cyclic nucleotide-binding domain AS588_17340 PF13545 Crp-like helix-turn-helix domain AS588_17345 PF07690 Major Facilitator Superfamily AS588_17350 PF00750 tRNA synthetases class I (R) AS588_17350 PF03485 Arginyl tRNA synthetase N terminal domain AS588_17350 PF05746 DALR anticodon binding domain AS588_17355 PF09148 Domain of unknown function (DUF1934) AS588_17360 PF13424 Tetratricopeptide repeat AS588_17365 PF11131 AS588_17365 AS588_17370 PF01381 Helix-turn-helix AS588_17385 PF01944 AS588_17385 AS588_17395 PF00196 Bacterial regulatory proteins, luxR family AS588_17400 PF00491 Arginase family AS588_17405 PF01564 Spermine/spermidine synthase AS588_17405 PF17284 AS588_17405 AS588_17410 PF00905 Penicillin binding protein transpeptidase domain AS588_17410 PF00912 Transglycosylase AS588_17420 PF08741 AS588_17420 AS588_17425 PF02163 Peptidase family M50 AS588_17430 PF01361 Tautomerase enzyme AS588_17435 PF01047 MarR family AS588_17445 PF13520 Amino acid permease AS588_17455 PF01966 HD domain AS588_17460 PF07293 AS588_17460 AS588_17470 PF03551 Transcriptional regulator PadR-like family AS588_17475 PF08006 AS588_17475 AS588_17480 PF03099 Biotin/lipoate A/B protein ligase family AS588_17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_17485 PF03466 LysR substrate binding domain AS588_17490 PF03601 AS588_17490 AS588_17495 PF01515 Phosphate acetyl/butaryl transferase AS588_17500 PF06778 Chlorite dismutase AS588_17505 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_17510 PF00155 Aminotransferase class I and II AS588_17515 PF07690 Major Facilitator Superfamily AS588_17520 PF13535 ATP-grasp domain AS588_17525 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_17530 PF07883 Cupin domain AS588_17540 PF07690 Major Facilitator Superfamily AS588_17545 PF07690 Major Facilitator Superfamily AS588_17550 PF00324 Amino acid permease AS588_17555 PF01546 Peptidase family M20/M25/M40 AS588_17560 PF00171 Aldehyde dehydrogenase family AS588_17565 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS588_17565 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AS588_17575 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AS588_17580 PF04321 RmlD substrate binding domain AS588_17585 PF16363 AS588_17585 AS588_17590 PF00483 Nucleotidyl transferase AS588_17600 PF02348 Cytidylyltransferase AS588_17605 PF03102 NeuB family AS588_17605 PF08666 SAF domain AS588_17610 PF00583 Acetyltransferase (GNAT) family AS588_17615 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS588_17620 PF05159 AS588_17620 AS588_17625 PF00535 Glycosyl transferase family 2 AS588_17630 PF09671 AS588_17630 AS588_17635 PF04241 AS588_17635 AS588_17640 PF00860 Permease family AS588_17645 PF17261 AS588_17645 AS588_17650 PF03167 Uracil DNA glycosylase superfamily AS588_17655 PF00535 Glycosyl transferase family 2 AS588_17670 PF03551 Transcriptional regulator PadR-like family AS588_17675 PF08543 Phosphomethylpyrimidine kinase AS588_17685 PF00251 Glycosyl hydrolases family 32 N-terminal domain AS588_17685 PF08244 Glycosyl hydrolases family 32 C terminal AS588_17690 PF00367 phosphotransferase system, EIIB AS588_17690 PF02378 Phosphotransferase system, EIIC AS588_17695 PF00874 PRD domain AS588_17695 PF03123 CAT RNA binding domain AS588_17705 PF00082 Subtilase family AS588_17705 PF02225 PA domain AS588_17705 PF05922 Peptidase inhibitor I9 AS588_17705 PF13860 FlgD Ig-like domain AS588_17710 PF00296 Luciferase-like monooxygenase AS588_17715 PF00881 Nitroreductase family AS588_17720 PF01098 AS588_17720 AS588_17725 PF00583 Acetyltransferase (GNAT) family AS588_17730 PF17368 AS588_17730 AS588_17735 PF03626 AS588_17735 AS588_17740 PF00510 Cytochrome c oxidase subunit III AS588_17745 PF00115 Cytochrome C and Quinol oxidase polypeptide I AS588_17750 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AS588_17750 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AS588_17755 PF04226 AS588_17755 AS588_17760 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AS588_17760 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AS588_17765 PF04138 AS588_17765 AS588_17770 PF00440 Bacterial regulatory proteins, tetR family AS588_17775 PF08671 Anti-repressor SinI AS588_17780 PF13489 Methyltransferase domain AS588_17785 PF13712 Glycosyltransferase like family AS588_17790 PF01323 DSBA-like thioredoxin domain AS588_17795 PF04261 Dyp-type peroxidase family AS588_17795 PF10518 TAT (twin-arginine translocation) pathway signal sequence AS588_17800 PF02581 Thiamine monophosphate synthase/TENI AS588_17805 PF02110 Hydroxyethylthiazole kinase family AS588_17810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_17810 PF03466 LysR substrate binding domain AS588_17815 PF03788 AS588_17815 AS588_17820 PF04172 AS588_17820 AS588_17825 PF09962 AS588_17825 AS588_17830 PF07739 TipAS antibiotic-recognition domain AS588_17830 PF13411 MerR HTH family regulatory protein AS588_17835 PF10672 S-adenosylmethionine-dependent methyltransferase AS588_17840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS588_17845 PF02378 Phosphotransferase system, EIIC AS588_17850 PF00082 Subtilase family AS588_17850 PF05922 Peptidase inhibitor I9 AS588_17855 PF01501 Glycosyl transferase family 8 AS588_17860 PF04607 Region found in RelA / SpoT proteins AS588_17865 PF01040 UbiA prenyltransferase family AS588_17870 PF12459 AS588_17870 AS588_17875 PF00501 AMP-binding enzyme AS588_17875 PF13193 AMP-binding enzyme C-terminal domain AS588_17880 PF03062 AS588_17880 AS588_17885 PF00550 Phosphopantetheine attachment site AS588_17890 PF04914 DltD C-terminal region AS588_17895 PF01063 Aminotransferase class IV AS588_17900 PF02056 Family 4 glycosyl hydrolase AS588_17900 PF11975 Family 4 glycosyl hydrolase C-terminal domain AS588_17905 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AS588_17910 PF02378 Phosphotransferase system, EIIC AS588_17915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS588_17920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AS588_17920 PF00874 PRD domain AS588_17920 PF05043 Mga helix-turn-helix domain AS588_17920 PF08279 HTH domain AS588_17925 PF02245 Methylpurine-DNA glycosylase (MPG) AS588_17930 PF01032 FecCD transport family AS588_17935 PF01032 FecCD transport family AS588_17940 PF01497 Periplasmic binding protein AS588_17945 PF01022 Bacterial regulatory protein, arsR family AS588_17950 PF02040 AS588_17950 AS588_17955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AS588_17960 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AS588_17965 PF02378 Phosphotransferase system, EIIC AS588_17970 PF00232 Glycosyl hydrolase family 1 AS588_17975 PF00480 ROK family AS588_17980 PF01238 Phosphomannose isomerase type I AS588_17985 PF02156 Glycosyl hydrolase family 26 AS588_17990 PF00199 Catalase AS588_17990 PF06628 Catalase-related immune-responsive AS588_17995 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AS588_18000 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AS588_18005 PF01256 Carbohydrate kinase AS588_18010 PF00005 ABC transporter AS588_18010 PF00664 ABC transporter transmembrane region AS588_18015 PF00005 ABC transporter AS588_18015 PF00664 ABC transporter transmembrane region AS588_18020 PF02322 AS588_18020 AS588_18025 PF01654 AS588_18025 AS588_18030 PF03390 AS588_18030 AS588_18035 PF01522 Polysaccharide deacetylase AS588_18040 PF00005 ABC transporter AS588_18040 PF03459 TOBE domain AS588_18045 PF13556 PucR C-terminal helix-turn-helix domain AS588_18050 PF02588 AS588_18050 AS588_18050 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS588_18055 PF11611 Domain of unknown function (DUF4352) AS588_18060 PF16363 AS588_18060 AS588_18065 PF01546 Peptidase family M20/M25/M40 AS588_18065 PF07687 Peptidase dimerisation domain AS588_18070 PF04525 Tubby C 2 AS588_18075 PF01717 Cobalamin-independent synthase, Catalytic domain AS588_18080 PF13649 Methyltransferase domain AS588_18085 PF01773 Na+ dependent nucleoside transporter N-terminus AS588_18085 PF07662 Na+ dependent nucleoside transporter C-terminus AS588_18090 PF11738 Protein of unknown function (DUF3298) AS588_18090 PF13739 Domain of unknown function (DUF4163) AS588_18100 PF00199 Catalase AS588_18100 PF01965 DJ-1/PfpI family AS588_18100 PF06628 Catalase-related immune-responsive AS588_18105 PF03600 Citrate transporter AS588_18110 PF00722 Glycosyl hydrolases family 16 AS588_18120 PF11700 AS588_18120 AS588_18125 PF00270 DEAD/DEAH box helicase AS588_18125 PF00271 Helicase conserved C-terminal domain AS588_18125 PF03880 DbpA RNA binding domain AS588_18140 PF14568 SMI1-KNR4 cell-wall AS588_18155 PF14176 AS588_18155 AS588_18195 PF00544 Pectate lyase AS588_18200 PF00892 EamA-like transporter family AS588_18205 PF00582 Universal stress protein family AS588_18215 PF00271 Helicase conserved C-terminal domain AS588_18215 PF04851 Type III restriction enzyme, res subunit AS588_18215 PF11907 AS588_18215 AS588_18215 PF13091 PLD-like domain AS588_18220 PF00293 NUDIX domain AS588_18225 PF04616 Glycosyl hydrolases family 43 AS588_18225 PF16369 AS588_18225 AS588_18230 PF09021 HutP AS588_18235 PF00221 Aromatic amino acid lyase AS588_18240 PF01175 Urocanase AS588_18240 PF17391 AS588_18240 AS588_18240 PF17392 AS588_18240 AS588_18245 PF07969 Amidohydrolase family AS588_18250 PF00491 Arginase family AS588_18255 PF00324 Amino acid permease AS588_18260 PF00591 Glycosyl transferase family, a/b domain AS588_18260 PF02885 Glycosyl transferase family, helical bundle domain AS588_18260 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AS588_18265 PF01773 Na+ dependent nucleoside transporter N-terminus AS588_18265 PF07662 Na+ dependent nucleoside transporter C-terminus AS588_18270 PF01791 DeoC/LacD family aldolase AS588_18275 PF04198 Putative sugar-binding domain AS588_18275 PF12802 MarR family AS588_18280 PF08282 haloacid dehalogenase-like hydrolase AS588_18290 PF11631 Protein of unknown function (DUF3255) AS588_18295 PF10359 AS588_18295 AS588_18310 PF01497 Periplasmic binding protein AS588_18315 PF06486 Protein of unknown function (DUF1093) AS588_18320 PF02687 AS588_18320 AS588_18325 PF00005 ABC transporter AS588_18330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_18335 PF00072 Response regulator receiver domain AS588_18335 PF00486 Transcriptional regulatory protein, C terminal AS588_18340 PF01116 Fructose-bisphosphate aldolase class-II AS588_18345 PF01261 Xylose isomerase-like TIM barrel AS588_18350 PF01261 Xylose isomerase-like TIM barrel AS588_18355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AS588_18355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AS588_18360 PF07690 Major Facilitator Superfamily AS588_18365 PF01261 Xylose isomerase-like TIM barrel AS588_18370 PF00205 Thiamine pyrophosphate enzyme, central domain AS588_18370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS588_18370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS588_18375 PF00294 pfkB family carbohydrate kinase AS588_18380 PF04962 KduI/IolB family AS588_18385 PF00171 Aldehyde dehydrogenase family AS588_18390 PF00455 AS588_18390 AS588_18390 PF08220 DeoR-like helix-turn-helix domain AS588_18395 PF00248 Aldo/keto reductase family AS588_18400 PF00083 Sugar (and other) transporter AS588_18405 PF00183 Hsp90 protein AS588_18405 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_18415 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_18420 PF00072 Response regulator receiver domain AS588_18420 PF00196 Bacterial regulatory proteins, luxR family AS588_18425 PF07730 Histidine kinase AS588_18430 PF00487 AS588_18430 AS588_18435 PF00440 Bacterial regulatory proteins, tetR family AS588_18440 PF00171 Aldehyde dehydrogenase family AS588_18445 PF13360 PQQ-like domain AS588_18445 PF13570 PQQ-like domain AS588_18450 PF17369 AS588_18450 AS588_18460 PF07690 Major Facilitator Superfamily AS588_18465 PF06271 AS588_18465 AS588_18470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS588_18475 PF00578 AhpC/TSA family AS588_18475 PF10417 C-terminal domain of 1-Cys peroxiredoxin AS588_18480 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS588_18480 PF13192 Thioredoxin domain AS588_18485 PF00324 Amino acid permease AS588_18490 PF06874 AS588_18490 AS588_18495 PF00111 2Fe-2S iron-sulfur cluster binding domain AS588_18495 PF01799 [2Fe-2S] binding domain AS588_18500 PF00941 FAD binding domain in molybdopterin dehydrogenase AS588_18505 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AS588_18505 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AS588_18510 PF12804 MobA-like NTP transferase domain AS588_18515 PF02625 XdhC and CoxI family AS588_18515 PF13478 XdhC Rossmann domain AS588_18520 PF06081 AS588_18520 AS588_18525 PF06874 AS588_18525 AS588_18535 PF01541 GIY-YIG catalytic domain AS588_18535 PF09848 Uncharacterized conserved protein (DUF2075) AS588_18540 PF12643 AS588_18540 AS588_18550 PF00665 Integrase core domain AS588_18550 PF13276 AS588_18550 AS588_18555 PF04851 Type III restriction enzyme, res subunit AS588_18555 PF13307 Helicase C-terminal domain AS588_18565 PF02590 Predicted SPOUT methyltransferase AS588_18585 PF00248 Aldo/keto reductase family AS588_18590 PF00583 Acetyltransferase (GNAT) family AS588_18600 PF00491 Arginase family AS588_18605 PF00324 Amino acid permease AS588_18610 PF00202 Aminotransferase class-III AS588_18615 PF07853 AS588_18615 AS588_18615 PF13630 AS588_18615 AS588_18620 PF01022 Bacterial regulatory protein, arsR family AS588_18625 PF00158 Sigma-54 interaction domain AS588_18625 PF02954 Bacterial regulatory protein, Fis family AS588_18625 PF13426 PAS domain AS588_18630 PF13621 Cupin-like domain AS588_18635 PF00005 ABC transporter AS588_18635 PF12848 ABC transporter AS588_18640 PF07690 Major Facilitator Superfamily AS588_18650 PF00899 ThiF family AS588_18655 PF00512 His Kinase A (phospho-acceptor) domain AS588_18655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_18660 PF00486 Transcriptional regulatory protein, C terminal AS588_18665 PF13180 PDZ domain AS588_18665 PF13365 Trypsin-like peptidase domain AS588_18670 PF00753 Metallo-beta-lactamase superfamily AS588_18675 PF09648 YycH protein AS588_18680 PF07435 YycH protein AS588_18685 PF00512 His Kinase A (phospho-acceptor) domain AS588_18685 PF00672 HAMP domain AS588_18685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS588_18685 PF13426 PAS domain AS588_18690 PF00072 Response regulator receiver domain AS588_18690 PF00486 Transcriptional regulatory protein, C terminal AS588_18720 PF00709 Adenylosuccinate synthetase AS588_18725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS588_18730 PF00772 DnaB-like helicase N terminal domain AS588_18730 PF03796 DnaB-like helicase C terminal domain AS588_18735 PF09954 AS588_18735 AS588_18750 PF00534 Glycosyl transferases group 1 AS588_18750 PF13439 Glycosyltransferase Family 4 AS588_18755 PF02958 Ecdysteroid kinase AS588_18760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS588_18765 PF00534 Glycosyl transferases group 1 AS588_18765 PF13439 Glycosyltransferase Family 4 AS588_18770 PF02585 GlcNAc-PI de-N-acetylase AS588_18775 PF00069 Protein kinase domain AS588_18780 PF01281 Ribosomal protein L9, N-terminal domain AS588_18780 PF03948 Ribosomal protein L9, C-terminal domain AS588_18785 PF01368 DHH family AS588_18785 PF02272 DHHA1 domain AS588_18790 PF09991 AS588_18790 AS588_18795 PF07875 AS588_18795 AS588_18800 PF01638 HxlR-like helix-turn-helix AS588_18805 PF01368 DHH family AS588_18805 PF02833 DHHA2 domain AS588_18810 PF00892 EamA-like transporter family AS588_18815 PF02435 Levansucrase/Invertase AS588_18820 PF00251 Glycosyl hydrolases family 32 N-terminal domain AS588_18820 PF08244 Glycosyl hydrolases family 32 C terminal AS588_18825 PF00392 Bacterial regulatory proteins, gntR family AS588_18825 PF07729 FCD domain AS588_18830 PF05163 DinB family AS588_18835 PF07690 Major Facilitator Superfamily AS588_18840 PF06993 AS588_18840 AS588_18845 PF00881 Nitroreductase family AS588_18850 PF01047 MarR family AS588_18855 PF02588 AS588_18855 AS588_18855 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AS588_18860 PF01047 MarR family AS588_18865 PF03466 LysR substrate binding domain AS588_18875 PF07485 AS588_18875 AS588_18880 PF02627 Carboxymuconolactone decarboxylase family AS588_18885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS588_18885 PF03466 LysR substrate binding domain AS588_18890 PF13561 Enoyl-(Acyl carrier protein) reductase AS588_18895 PF00155 Aminotransferase class I and II AS588_18895 PF00392 Bacterial regulatory proteins, gntR family AS588_18900 PF00892 EamA-like transporter family AS588_18905 PF05368 NmrA-like family AS588_18910 PF02525 Flavodoxin-like fold AS588_18915 PF02082 Transcriptional regulator AS588_18920 PF01381 Helix-turn-helix AS588_18925 PF00893 Small Multidrug Resistance protein AS588_18930 PF03190 Protein of unknown function, DUF255 AS588_18930 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) AS588_18935 PF02517 CAAX protease self-immunity AS588_18945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS588_18950 PF00356 Bacterial regulatory proteins, lacI family AS588_18950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AS588_18955 PF03372 Endonuclease/Exonuclease/phosphatase family AS588_18960 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AS588_18960 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AS588_18965 PF02805 Metal binding domain of Ada AS588_18965 PF12833 Helix-turn-helix domain AS588_18970 PF01084 Ribosomal protein S18 AS588_18975 PF00436 Single-strand binding protein family AS588_18980 PF01250 Ribosomal protein S6 AS588_18985 PF01926 50S ribosome-binding GTPase AS588_18985 PF06071 Protein of unknown function (DUF933) AS588_18990 PF00384 Molybdopterin oxidoreductase AS588_18990 PF01568 Molydopterin dinucleotide binding domain AS588_18990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS588_18995 PF06107 AS588_18995 AS588_19010 PF06866 AS588_19010 AS588_19015 PF02195 ParB-like nuclease domain AS588_19020 PF13614 AAA domain AS588_19025 PF02195 ParB-like nuclease domain AS588_19030 PF02527 rRNA small subunit methyltransferase G AS588_19035 PF01134 Glucose inhibited division protein A AS588_19035 PF13932 GidA associated domain 3 AS588_19040 PF01926 50S ribosome-binding GTPase AS588_19040 PF10396 GTP-binding protein TrmE N-terminus AS588_19040 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE AS588_19045 PF01424 R3H domain AS588_19045 PF13083 KH domain AS588_19045 PF14804 Jag N-terminus AS588_19050 PF02096 60Kd inner membrane protein AS588_19055 PF00825 Ribonuclease P AS588_19070 PF01446 AS588_19070 AS588_19085 PF00717 Peptidase S24-like AS588_19090 PF01076 Plasmid recombination enzyme AS588_19095 PF13152 AS588_19095 AS588_19095 PF13411 MerR HTH family regulatory protein