AS588_00005 SM00382 ATPases associated with a variety of cellular activities AS588_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AS588_00010 SM00480 DNA polymerase III beta subunit AS588_00030 SM00387 Histidine kinase-like ATPases AS588_00030 SM00433 TopoisomeraseII AS588_00035 SM00434 DNA Topoisomerase IV AS588_00110 SM00881 CoA binding domain AS588_00135 SM00883 Chaperonin 10 Kd subunit AS588_00160 SM00028 Tetratricopeptide repeats AS588_00160 SM00382 ATPases associated with a variety of cellular activities AS588_00165 SM00829 Enoylreductase AS588_00220 SM00829 Enoylreductase AS588_00265 SM00460 Transglutaminase/protease-like homologues AS588_00305 SM01001 AIR carboxylase AS588_00315 SM00998 Adenylosuccinate lyase C-terminus AS588_00330 SM01211 AS588_00330 AS588_00355 SM00798 AICARFT/IMPCHase bienzyme AS588_00355 SM00851 MGS-like domain AS588_00360 SM01209 AS588_00360 AS588_00360 SM01210 AS588_00360 AS588_00405 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS588_00405 SM00292 breast cancer carboxy-terminal domain AS588_00405 SM00532 Ligase N family AS588_00440 SM00845 GatB domain AS588_00455 SM00046 Diacylglycerol kinase catalytic domain (presumed) AS588_00470 SM00382 ATPases associated with a variety of cellular activities AS588_00565 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_00635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS588_00650 SM00382 ATPases associated with a variety of cellular activities AS588_00655 SM00422 helix_turn_helix, mercury resistance AS588_00665 SM00382 ATPases associated with a variety of cellular activities AS588_00670 SM00487 DEAD-like helicases superfamily AS588_00670 SM00490 helicase superfamily c-terminal domain AS588_00680 SM00829 Enoylreductase AS588_00695 SM00656 AS588_00695 AS588_00720 SM00387 Histidine kinase-like ATPases AS588_00720 SM00388 His Kinase A (phosphoacceptor) domain AS588_00720 SM00448 cheY-homologous receiver domain AS588_00725 SM00448 cheY-homologous receiver domain AS588_00725 SM00862 Transcriptional regulatory protein, C terminal AS588_00740 SM00091 PAS domain AS588_00740 SM00387 Histidine kinase-like ATPases AS588_00745 SM00448 cheY-homologous receiver domain AS588_00760 SM00849 Metallo-beta-lactamase superfamily AS588_00830 SM00642 Alpha-amylase domain AS588_00835 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_00835 SM00866 AS588_00835 AS588_00865 SM00354 helix_turn _helix lactose operon repressor AS588_00890 SM00226 Low molecular weight phosphatase family AS588_00955 SM00478 endonuclease III AS588_00985 SM00861 Transketolase, pyrimidine binding domain AS588_01000 SM00382 ATPases associated with a variety of cellular activities AS588_01030 SM00382 ATPases associated with a variety of cellular activities AS588_01085 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_01150 SM00287 Bacterial SH3 domain homologues AS588_01180 SM00478 endonuclease III AS588_01180 SM00525 AS588_01180 AS588_01210 SM00382 ATPases associated with a variety of cellular activities AS588_01400 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AS588_01425 SM00947 Carbonic anhydrase AS588_01430 SM01234 AS588_01430 AS588_01470 SM00382 ATPases associated with a variety of cellular activities AS588_01540 SM00729 Elongator protein 3, MiaB family, Radical SAM AS588_01550 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_01555 SM00382 ATPases associated with a variety of cellular activities AS588_01575 SM00382 ATPases associated with a variety of cellular activities AS588_01585 SM00448 cheY-homologous receiver domain AS588_01585 SM00862 Transcriptional regulatory protein, C terminal AS588_01590 SM00387 Histidine kinase-like ATPases AS588_01595 SM00382 ATPases associated with a variety of cellular activities AS588_01615 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS588_01615 SM00091 PAS domain AS588_01630 SM00450 Rhodanese Homology Domain AS588_01660 SM00354 helix_turn _helix lactose operon repressor AS588_01685 SM00363 S4 RNA-binding domain AS588_01690 SM00420 helix_turn_helix, Deoxyribose operon repressor AS588_01695 SM00382 ATPases associated with a variety of cellular activities AS588_01730 SM00046 Diacylglycerol kinase catalytic domain (presumed) AS588_01750 SM00849 Metallo-beta-lactamase superfamily AS588_01755 SM00919 Malic enzyme, NAD binding domain AS588_01755 SM01274 AS588_01755 AS588_01790 SM00382 ATPases associated with a variety of cellular activities AS588_01790 SM00843 AS588_01790 AS588_01815 SM00830 Chorismate mutase type II AS588_01820 SM00354 helix_turn _helix lactose operon repressor AS588_01840 SM00116 Domain in cystathionine beta-synthase and other proteins. AS588_01855 SM00363 S4 RNA-binding domain AS588_01905 SM00860 SMI1 / KNR4 family AS588_01915 SM00363 S4 RNA-binding domain AS588_01915 SM01390 AS588_01915 AS588_01920 SM00267 diguanylate cyclase AS588_01955 SM00981 AS588_01955 AS588_02015 SM00852 Probable molybdopterin binding domain AS588_02035 SM00849 Metallo-beta-lactamase superfamily AS588_02040 SM00116 Domain in cystathionine beta-synthase and other proteins. AS588_02070 SM00481 DNA polymerase alpha chain like domain AS588_02075 SM00919 Malic enzyme, NAD binding domain AS588_02075 SM01274 AS588_02075 AS588_02130 SM01329 AS588_02130 AS588_02140 SM00448 cheY-homologous receiver domain AS588_02140 SM00862 Transcriptional regulatory protein, C terminal AS588_02145 SM00091 PAS domain AS588_02145 SM00387 Histidine kinase-like ATPases AS588_02145 SM00388 His Kinase A (phosphoacceptor) domain AS588_02150 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AS588_02150 SM00474 3'-5' exonuclease AS588_02150 SM00475 5'-3' exonuclease AS588_02150 SM00482 DNA polymerase A domain AS588_02155 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AS588_02155 SM01232 AS588_02155 AS588_02185 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS588_02205 SM00382 ATPases associated with a variety of cellular activities AS588_02220 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS588_02230 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS588_02230 SM00387 Histidine kinase-like ATPases AS588_02235 SM00448 cheY-homologous receiver domain AS588_02235 SM00850 LytTr DNA-binding domain AS588_02295 SM01007 Class II Aldolase and Adducin N-terminal domain AS588_02325 SM00813 Alpha-L-arabinofuranosidase C-terminus AS588_02355 SM00967 RNA 2'-O ribose methyltransferase substrate binding AS588_02365 SM00873 B3/4 domain AS588_02365 SM00874 tRNA synthetase B5 domain AS588_02365 SM00896 Ferredoxin-fold anticodon binding domain AS588_02385 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS588_02385 SM00481 DNA polymerase alpha chain like domain AS588_02385 SM00483 DNA polymerase X family AS588_02390 SM00463 Small MutS-related domain AS588_02390 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AS588_02390 SM00534 ATPase domain of DNA mismatch repair MUTS family AS588_02420 SM00893 Electron transfer flavoprotein domain AS588_02425 SM00893 Electron transfer flavoprotein domain AS588_02430 SM00813 Alpha-L-arabinofuranosidase C-terminus AS588_02440 SM00465 GIY-YIG type nucleases (URI domain) AS588_02475 SM00421 helix_turn_helix, Lux Regulon AS588_02480 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_02490 SM00909 Sporulation and spore germination AS588_02545 SM00917 LeuA allosteric (dimerisation) domain AS588_02550 SM01329 AS588_02550 AS588_02575 SM00382 ATPases associated with a variety of cellular activities AS588_02575 SM00994 ClpX C4-type zinc finger AS588_02575 SM01086 C-terminal, D2-small domain, of ClpB protein AS588_02580 SM00382 ATPases associated with a variety of cellular activities AS588_02585 SM00382 ATPases associated with a variety of cellular activities AS588_02585 SM00464 Found in ATP-dependent protease La (LON) AS588_02620 SM01004 Delta-aminolevulinic acid dehydratase AS588_02630 SM00257 Lysin motif AS588_02725 SM01317 AS588_02725 AS588_02770 SM00257 Lysin motif AS588_02790 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS588_02795 SM00382 ATPases associated with a variety of cellular activities AS588_02815 SM01323 AS588_02815 AS588_02865 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS588_02865 SM00954 Region found in RelA / SpoT proteins AS588_02875 SM00287 Bacterial SH3 domain homologues AS588_02875 SM00646 AS588_02875 AS588_02900 SM00382 ATPases associated with a variety of cellular activities AS588_02920 SM00028 Tetratricopeptide repeats AS588_02925 SM00382 ATPases associated with a variety of cellular activities AS588_02950 SM00062 Bacterial periplasmic substrate-binding proteins AS588_02950 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AS588_02955 SM00382 ATPases associated with a variety of cellular activities AS588_02965 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS588_02975 SM00732 Likely ribonuclease with RNase H fold. AS588_03030 SM00530 Helix-turn-helix XRE-family like proteins AS588_03215 SM00047 Lysozyme subfamily 2 AS588_03220 SM00710 Parallel beta-helix repeats AS588_03245 SM00644 AS588_03245 AS588_03315 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AS588_03315 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS588_03365 SM00849 Metallo-beta-lactamase superfamily AS588_03425 SM00342 helix_turn_helix, arabinose operon control protein AS588_03425 SM00871 Bacterial transcription activator, effector binding domain AS588_03485 SM01103 AS588_03485 AS588_03495 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS588_03515 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS588_03525 SM00849 Metallo-beta-lactamase superfamily AS588_03555 SM00838 Elongation factor G C-terminus AS588_03560 SM00729 Elongator protein 3, MiaB family, Radical SAM AS588_03580 SM00271 DnaJ molecular chaperone homology domain AS588_03595 SM00729 Elongator protein 3, MiaB family, Radical SAM AS588_03645 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS588_03685 SM00116 Domain in cystathionine beta-synthase and other proteins. AS588_03700 SM00400 zinc finger AS588_03700 SM00493 AS588_03700 AS588_03735 SM00487 DEAD-like helicases superfamily AS588_03735 SM00490 helicase superfamily c-terminal domain AS588_03740 SM00518 AP endonuclease family 2 AS588_03775 SM00257 Lysin motif AS588_03820 SM00382 ATPases associated with a variety of cellular activities AS588_03825 SM00382 ATPases associated with a variety of cellular activities AS588_03860 SM00631 AS588_03860 AS588_03875 SM00849 Metallo-beta-lactamase superfamily AS588_03900 SM01091 Transporter associated domain AS588_03910 SM00382 ATPases associated with a variety of cellular activities AS588_03970 SM00530 Helix-turn-helix XRE-family like proteins AS588_03985 SM00487 DEAD-like helicases superfamily AS588_03985 SM00490 helicase superfamily c-terminal domain AS588_04005 SM00450 Rhodanese Homology Domain AS588_04015 SM00529 Helix-turn-helix diphteria tox regulatory element AS588_04045 SM00841 Elongation factor P, C-terminal AS588_04045 SM01185 AS588_04045 AS588_04055 SM00382 ATPases associated with a variety of cellular activities AS588_04100 SM00878 Biotin carboxylase C-terminal domain AS588_04135 SM00861 Transketolase, pyrimidine binding domain AS588_04140 SM00363 S4 RNA-binding domain AS588_04155 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS588_04160 SM00448 cheY-homologous receiver domain AS588_04165 SM01005 Alanine racemase, C-terminal domain AS588_04190 SM00530 Helix-turn-helix XRE-family like proteins AS588_04205 SM00646 AS588_04205 AS588_04250 SM00091 PAS domain AS588_04250 SM00382 ATPases associated with a variety of cellular activities AS588_04260 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS588_04280 SM00861 Transketolase, pyrimidine binding domain AS588_04290 SM00046 Diacylglycerol kinase catalytic domain (presumed) AS588_04300 SM00062 Bacterial periplasmic substrate-binding proteins AS588_04300 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AS588_04310 SM00382 ATPases associated with a variety of cellular activities AS588_04355 SM01350 AS588_04355 AS588_04395 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AS588_04400 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AS588_04425 SM00822 AS588_04425 AS588_04425 SM00823 Phosphopantetheine attachment site AS588_04425 SM00825 Beta-ketoacyl synthase AS588_04425 SM00826 AS588_04425 AS588_04425 SM01294 AS588_04425 AS588_04430 SM00822 AS588_04430 AS588_04430 SM00823 Phosphopantetheine attachment site AS588_04430 SM00825 Beta-ketoacyl synthase AS588_04430 SM01294 AS588_04430 AS588_04435 SM00822 AS588_04435 AS588_04435 SM00823 Phosphopantetheine attachment site AS588_04435 SM00825 Beta-ketoacyl synthase AS588_04435 SM00826 AS588_04435 AS588_04435 SM01294 AS588_04435 AS588_04440 SM00822 AS588_04440 AS588_04440 SM00823 Phosphopantetheine attachment site AS588_04440 SM00825 Beta-ketoacyl synthase AS588_04440 SM00826 AS588_04440 AS588_04440 SM01294 AS588_04440 AS588_04445 SM00822 AS588_04445 AS588_04445 SM00823 Phosphopantetheine attachment site AS588_04445 SM00825 Beta-ketoacyl synthase AS588_04445 SM01294 AS588_04445 AS588_04450 SM00822 AS588_04450 AS588_04450 SM00825 Beta-ketoacyl synthase AS588_04450 SM00826 AS588_04450 AS588_04455 SM00823 Phosphopantetheine attachment site AS588_04455 SM00825 Beta-ketoacyl synthase AS588_04455 SM00829 Enoylreductase AS588_04455 SM01294 AS588_04455 AS588_04480 SM00849 Metallo-beta-lactamase superfamily AS588_04580 SM00530 Helix-turn-helix XRE-family like proteins AS588_04585 SM00870 AS588_04585 AS588_04600 SM00919 Malic enzyme, NAD binding domain AS588_04600 SM01274 AS588_04600 AS588_04645 SM00936 Penicillin-binding protein 5, C-terminal domain AS588_04655 SM00387 Histidine kinase-like ATPases AS588_04790 SM00363 S4 RNA-binding domain AS588_04810 SM00448 cheY-homologous receiver domain AS588_04810 SM00862 Transcriptional regulatory protein, C terminal AS588_04815 SM00091 PAS domain AS588_04815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS588_04815 SM00387 Histidine kinase-like ATPases AS588_04815 SM00388 His Kinase A (phosphoacceptor) domain AS588_04850 SM00487 DEAD-like helicases superfamily AS588_04850 SM00490 helicase superfamily c-terminal domain AS588_04860 SM00257 Lysin motif AS588_04880 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS588_04915 SM00316 Ribosomal protein S1-like RNA-binding domain AS588_04955 SM00411 bacterial (prokaryotic) histone like domain AS588_04985 SM00562 AS588_04985 AS588_04990 SM00138 Methyltransferase, chemotaxis proteins AS588_05055 SM00028 Tetratricopeptide repeats AS588_05060 SM00914 AS588_05060 AS588_05095 SM00835 Cupin AS588_05115 SM00851 MGS-like domain AS588_05155 SM00479 AS588_05155 AS588_05155 SM00487 DEAD-like helicases superfamily AS588_05155 SM00491 AS588_05155 AS588_05180 SM00478 endonuclease III AS588_05180 SM00525 AS588_05180 AS588_05190 SM00060 Fibronectin type 3 domain AS588_05240 SM00487 DEAD-like helicases superfamily AS588_05240 SM00490 helicase superfamily c-terminal domain AS588_05265 SM00981 AS588_05265 AS588_05280 SM00491 AS588_05280 AS588_05350 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AS588_05350 SM00475 5'-3' exonuclease AS588_05390 SM00357 Cold shock protein domain AS588_05410 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS588_05415 SM00567 E-Z type HEAT repeats AS588_05415 SM00932 Scaffold protein Nfu/NifU N terminal AS588_05490 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_05555 SM00882 Coenzyme A transferase AS588_05560 SM00882 Coenzyme A transferase AS588_05605 SM00014 Acid phosphatase homologues AS588_05635 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS588_05635 SM00245 tail specific protease AS588_05640 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_05640 SM00866 AS588_05640 AS588_05745 SM00257 Lysin motif AS588_05755 SM00382 ATPases associated with a variety of cellular activities AS588_05760 SM00327 von Willebrand factor (vWF) type A domain AS588_05765 SM00861 Transketolase, pyrimidine binding domain AS588_05775 SM00849 Metallo-beta-lactamase superfamily AS588_05855 SM00341 Helicase and RNase D C-terminal AS588_05855 SM00487 DEAD-like helicases superfamily AS588_05855 SM00490 helicase superfamily c-terminal domain AS588_05855 SM00956 AS588_05855 AS588_05860 SM00257 Lysin motif AS588_05895 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS588_05905 SM00849 Metallo-beta-lactamase superfamily AS588_05915 SM00342 helix_turn_helix, arabinose operon control protein AS588_05930 SM00822 AS588_05930 AS588_05940 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_05950 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AS588_05980 SM00822 AS588_05980 AS588_05995 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AS588_06020 SM00829 Enoylreductase AS588_06030 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS588_06080 SM00823 Phosphopantetheine attachment site AS588_06085 SM00823 Phosphopantetheine attachment site AS588_06090 SM00823 Phosphopantetheine attachment site AS588_06095 SM00823 Phosphopantetheine attachment site AS588_06100 SM00824 Thioesterase AS588_06125 SM00878 Biotin carboxylase C-terminal domain AS588_06185 SM00729 Elongator protein 3, MiaB family, Radical SAM AS588_06185 SM00876 Biotin and Thiamin Synthesis associated domain AS588_06200 SM00882 Coenzyme A transferase AS588_06205 SM00882 Coenzyme A transferase AS588_06210 SM00822 AS588_06210 AS588_06215 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AS588_06220 SM00823 Phosphopantetheine attachment site AS588_06220 SM00825 Beta-ketoacyl synthase AS588_06225 SM00823 Phosphopantetheine attachment site AS588_06230 SM00823 Phosphopantetheine attachment site AS588_06230 SM00824 Thioesterase AS588_06235 SM00606 Cellulose Binding Domain Type IV AS588_06245 SM00448 cheY-homologous receiver domain AS588_06245 SM00862 Transcriptional regulatory protein, C terminal AS588_06250 SM00387 Histidine kinase-like ATPases AS588_06250 SM00388 His Kinase A (phosphoacceptor) domain AS588_06260 SM01067 Cellulose binding domain AS588_06290 SM00354 helix_turn _helix lactose operon repressor AS588_06310 SM00829 Enoylreductase AS588_06330 SM00434 DNA Topoisomerase IV AS588_06335 SM00387 Histidine kinase-like ATPases AS588_06335 SM00433 TopoisomeraseII AS588_06340 SM00881 CoA binding domain AS588_06345 SM01207 AS588_06345 AS588_06415 SM00448 cheY-homologous receiver domain AS588_06440 SM00861 Transketolase, pyrimidine binding domain AS588_06450 SM00857 Resolvase, N terminal domain AS588_06455 SM00257 Lysin motif AS588_06490 SM00710 Parallel beta-helix repeats AS588_06545 SM00829 Enoylreductase AS588_06605 SM01230 AS588_06605 AS588_06610 SM00422 helix_turn_helix, mercury resistance AS588_06625 SM00382 ATPases associated with a variety of cellular activities AS588_06635 SM00646 AS588_06635 AS588_06740 SM00823 Phosphopantetheine attachment site AS588_06740 SM00825 Beta-ketoacyl synthase AS588_06740 SM01294 AS588_06740 AS588_06745 SM00822 AS588_06745 AS588_06745 SM00823 Phosphopantetheine attachment site AS588_06745 SM00825 Beta-ketoacyl synthase AS588_06745 SM00826 AS588_06745 AS588_06745 SM01294 AS588_06745 AS588_06750 SM00822 AS588_06750 AS588_06750 SM00823 Phosphopantetheine attachment site AS588_06750 SM00825 Beta-ketoacyl synthase AS588_06750 SM00826 AS588_06750 AS588_06750 SM01294 AS588_06750 AS588_06755 SM00822 AS588_06755 AS588_06755 SM00823 Phosphopantetheine attachment site AS588_06755 SM00825 Beta-ketoacyl synthase AS588_06755 SM00826 AS588_06755 AS588_06755 SM01294 AS588_06755 AS588_06760 SM00822 AS588_06760 AS588_06760 SM00823 Phosphopantetheine attachment site AS588_06760 SM00825 Beta-ketoacyl synthase AS588_06760 SM00826 AS588_06760 AS588_06760 SM01294 AS588_06760 AS588_06785 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AS588_06790 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AS588_06795 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AS588_06800 SM00849 Metallo-beta-lactamase superfamily AS588_06810 SM00853 MutL C terminal dimerisation domain AS588_06810 SM01340 AS588_06810 AS588_06815 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AS588_06815 SM00534 ATPase domain of DNA mismatch repair MUTS family AS588_06830 SM00729 Elongator protein 3, MiaB family, Radical SAM AS588_06840 SM00829 Enoylreductase AS588_06855 SM00322 K homology RNA-binding domain AS588_06855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS588_06865 SM00382 ATPases associated with a variety of cellular activities AS588_06870 SM00852 Probable molybdopterin binding domain AS588_06880 SM00530 Helix-turn-helix XRE-family like proteins AS588_06915 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_06925 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_06925 SM00866 AS588_06925 AS588_06930 SM00382 ATPases associated with a variety of cellular activities AS588_06930 SM00843 AS588_06930 AS588_06945 SM00849 Metallo-beta-lactamase superfamily AS588_06950 SM01130 AS588_06950 AS588_06960 SM00859 Semialdehyde dehydrogenase, NAD binding domain AS588_06990 SM00316 Ribosomal protein S1-like RNA-binding domain AS588_06990 SM00322 K homology RNA-binding domain AS588_06995 SM01387 AS588_06995 AS588_07000 SM00904 Riboflavin kinase AS588_07035 SM00316 Ribosomal protein S1-like RNA-binding domain AS588_07035 SM00322 K homology RNA-binding domain AS588_07045 SM00479 AS588_07045 AS588_07045 SM00481 DNA polymerase alpha chain like domain AS588_07055 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS588_07115 SM00260 Two component signalling adaptor domain AS588_07120 SM00073 Histidine Phosphotransfer domain AS588_07120 SM00260 Two component signalling adaptor domain AS588_07120 SM00387 Histidine kinase-like ATPases AS588_07120 SM01231 AS588_07120 AS588_07125 SM00448 cheY-homologous receiver domain AS588_07135 SM00962 SRP54-type protein, GTPase domain AS588_07170 SM00448 cheY-homologous receiver domain AS588_07220 SM00382 ATPases associated with a variety of cellular activities AS588_07260 SM00382 ATPases associated with a variety of cellular activities AS588_07260 SM01086 C-terminal, D2-small domain, of ClpB protein AS588_07280 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS588_07280 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS588_07280 SM00493 AS588_07280 AS588_07290 SM00881 CoA binding domain AS588_07350 SM00382 ATPases associated with a variety of cellular activities AS588_07350 SM00962 SRP54-type protein, GTPase domain AS588_07350 SM00963 SRP54-type protein, helical bundle domain AS588_07365 SM00382 ATPases associated with a variety of cellular activities AS588_07365 SM00962 SRP54-type protein, GTPase domain AS588_07365 SM00963 SRP54-type protein, helical bundle domain AS588_07370 SM00968 SMC proteins Flexible Hinge Domain AS588_07375 SM00358 Double-stranded RNA binding motif AS588_07375 SM00535 Ribonuclease III family AS588_07385 SM00822 AS588_07385 AS588_07390 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AS588_07405 SM00487 DEAD-like helicases superfamily AS588_07405 SM00490 helicase superfamily c-terminal domain AS588_07420 SM01120 AS588_07420 AS588_07420 SM01121 AS588_07420 AS588_07440 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AS588_07455 SM00220 Serine/Threonine protein kinases, catalytic domain AS588_07455 SM00740 AS588_07455 AS588_07460 SM00331 Sigma factor PP2C-like phosphatases AS588_07460 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AS588_07485 SM00487 DEAD-like helicases superfamily AS588_07485 SM00490 helicase superfamily c-terminal domain AS588_07495 SM01409 AS588_07495 AS588_07500 SM00072 Guanylate kinase homologues. AS588_07515 SM00831 Cation transporter/ATPase, N-terminus AS588_07565 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AS588_07580 SM00851 MGS-like domain AS588_07580 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AS588_07585 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AS588_07610 SM00363 S4 RNA-binding domain AS588_07640 SM00363 S4 RNA-binding domain AS588_07675 SM00382 ATPases associated with a variety of cellular activities AS588_07700 SM00864 Tubulin/FtsZ family, GTPase domain AS588_07700 SM00865 Tubulin/FtsZ family, C-terminal domain AS588_07705 SM00842 Cell division protein FtsA AS588_07745 SM00740 AS588_07745 AS588_07750 SM00740 AS588_07750 AS588_07855 SM00116 Domain in cystathionine beta-synthase and other proteins. AS588_07900 SM00878 Biotin carboxylase C-terminal domain AS588_07925 SM00670 Large family of predicted nucleotide-binding domains AS588_07945 SM00838 Elongation factor G C-terminus AS588_08025 SM00861 Transketolase, pyrimidine binding domain AS588_08040 SM00822 AS588_08040 AS588_08040 SM00823 Phosphopantetheine attachment site AS588_08040 SM01294 AS588_08040 AS588_08045 SM00822 AS588_08045 AS588_08045 SM00823 Phosphopantetheine attachment site AS588_08045 SM00825 Beta-ketoacyl synthase AS588_08045 SM01294 AS588_08045 AS588_08050 SM00822 AS588_08050 AS588_08050 SM00823 Phosphopantetheine attachment site AS588_08050 SM00825 Beta-ketoacyl synthase AS588_08050 SM01294 AS588_08050 AS588_08055 SM00822 AS588_08055 AS588_08055 SM00823 Phosphopantetheine attachment site AS588_08055 SM00825 Beta-ketoacyl synthase AS588_08055 SM01294 AS588_08055 AS588_08060 SM00822 AS588_08060 AS588_08060 SM00823 Phosphopantetheine attachment site AS588_08060 SM00825 Beta-ketoacyl synthase AS588_08060 SM01294 AS588_08060 AS588_08065 SM00822 AS588_08065 AS588_08065 SM00823 Phosphopantetheine attachment site AS588_08065 SM00825 Beta-ketoacyl synthase AS588_08065 SM00826 AS588_08065 AS588_08070 SM00822 AS588_08070 AS588_08070 SM00823 Phosphopantetheine attachment site AS588_08070 SM00825 Beta-ketoacyl synthase AS588_08070 SM00826 AS588_08070 AS588_08070 SM01294 AS588_08070 AS588_08075 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AS588_08105 SM00849 Metallo-beta-lactamase superfamily AS588_08125 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS588_08125 SM00091 PAS domain AS588_08125 SM00387 Histidine kinase-like ATPases AS588_08125 SM00388 His Kinase A (phosphoacceptor) domain AS588_08130 SM00966 SpoVT / AbrB like domain AS588_08155 SM00382 ATPases associated with a variety of cellular activities AS588_08180 SM00420 helix_turn_helix, Deoxyribose operon repressor AS588_08180 SM01134 AS588_08180 AS588_08185 SM01066 Carbohydrate binding domain AS588_08190 SM00382 ATPases associated with a variety of cellular activities AS588_08220 SM00852 Probable molybdopterin binding domain AS588_08310 SM00052 Putative diguanylate phosphodiesterase AS588_08330 SM00257 Lysin motif AS588_08345 SM00260 Two component signalling adaptor domain AS588_08345 SM00448 cheY-homologous receiver domain AS588_08355 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AS588_08355 SM00091 PAS domain AS588_08355 SM00387 Histidine kinase-like ATPases AS588_08355 SM00388 His Kinase A (phosphoacceptor) domain AS588_08380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS588_08380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS588_08410 SM01061 CAT RNA binding domain AS588_08415 SM00354 helix_turn _helix lactose operon repressor AS588_08490 SM00382 ATPases associated with a variety of cellular activities AS588_08490 SM01086 C-terminal, D2-small domain, of ClpB protein AS588_08505 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_08510 SM00387 Histidine kinase-like ATPases AS588_08510 SM00388 His Kinase A (phosphoacceptor) domain AS588_08525 SM01007 Class II Aldolase and Adducin N-terminal domain AS588_08565 SM00091 PAS domain AS588_08565 SM00387 Histidine kinase-like ATPases AS588_08565 SM00388 His Kinase A (phosphoacceptor) domain AS588_08625 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AS588_08640 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_08650 SM00422 helix_turn_helix, mercury resistance AS588_08655 SM00116 Domain in cystathionine beta-synthase and other proteins. AS588_08655 SM00924 MgtE intracellular N domain AS588_08660 SM00257 Lysin motif AS588_08660 SM00636 AS588_08660 AS588_08670 SM00382 ATPases associated with a variety of cellular activities AS588_08695 SM00100 Cyclic nucleotide-monophosphate binding domain AS588_08710 SM00028 Tetratricopeptide repeats AS588_08730 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_08745 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AS588_08785 SM00382 ATPases associated with a variety of cellular activities AS588_08795 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AS588_08810 SM00382 ATPases associated with a variety of cellular activities AS588_08835 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS588_08880 SM00257 Lysin motif AS588_08880 SM00644 AS588_08880 AS588_08945 SM00257 Lysin motif AS588_09035 SM00382 ATPases associated with a variety of cellular activities AS588_09050 SM00530 Helix-turn-helix XRE-family like proteins AS588_09070 SM00257 Lysin motif AS588_09070 SM00644 AS588_09070 AS588_09075 SM00028 Tetratricopeptide repeats AS588_09090 SM01260 AS588_09090 AS588_09095 SM00382 ATPases associated with a variety of cellular activities AS588_09100 SM01260 AS588_09100 AS588_09110 SM00421 helix_turn_helix, Lux Regulon AS588_09110 SM00448 cheY-homologous receiver domain AS588_09130 SM00382 ATPases associated with a variety of cellular activities AS588_09135 SM00387 Histidine kinase-like ATPases AS588_09135 SM00388 His Kinase A (phosphoacceptor) domain AS588_09140 SM00448 cheY-homologous receiver domain AS588_09140 SM00862 Transcriptional regulatory protein, C terminal AS588_09145 SM00858 AS588_09145 AS588_09155 SM00354 helix_turn _helix lactose operon repressor AS588_09190 SM00382 ATPases associated with a variety of cellular activities AS588_09225 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AS588_09225 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS588_09250 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_09265 SM00420 helix_turn_helix, Deoxyribose operon repressor AS588_09265 SM01134 AS588_09265 AS588_09305 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_09360 SM00257 Lysin motif AS588_09360 SM00644 AS588_09360 AS588_09475 SM00645 Papain family cysteine protease AS588_09520 SM00382 ATPases associated with a variety of cellular activities AS588_09580 SM00530 Helix-turn-helix XRE-family like proteins AS588_09585 SM00530 Helix-turn-helix XRE-family like proteins AS588_09635 SM00966 SpoVT / AbrB like domain AS588_09640 SM00382 ATPases associated with a variety of cellular activities AS588_09650 SM00849 Metallo-beta-lactamase superfamily AS588_09775 SM00954 Region found in RelA / SpoT proteins AS588_09785 SM01118 AS588_09785 AS588_09840 SM00382 ATPases associated with a variety of cellular activities AS588_09845 SM00382 ATPases associated with a variety of cellular activities AS588_09890 SM00382 ATPases associated with a variety of cellular activities AS588_09895 SM00382 ATPases associated with a variety of cellular activities AS588_09905 SM00825 Beta-ketoacyl synthase AS588_09960 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AS588_09965 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AS588_09985 SM00859 Semialdehyde dehydrogenase, NAD binding domain AS588_10040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS588_10040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS588_10050 SM00316 Ribosomal protein S1-like RNA-binding domain AS588_10085 SM00354 helix_turn _helix lactose operon repressor AS588_10090 SM00342 helix_turn_helix, arabinose operon control protein AS588_10215 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_10255 SM00894 Excalibur calcium-binding domain AS588_10280 SM00914 AS588_10280 AS588_10295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS588_10315 SM00855 Phosphoglycerate mutase family AS588_10360 SM00849 Metallo-beta-lactamase superfamily AS588_10440 SM00382 ATPases associated with a variety of cellular activities AS588_10470 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_10510 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS588_10530 SM00382 ATPases associated with a variety of cellular activities AS588_10565 SM00729 Elongator protein 3, MiaB family, Radical SAM AS588_10615 SM00382 ATPases associated with a variety of cellular activities AS588_10620 SM00382 ATPases associated with a variety of cellular activities AS588_10675 SM01091 Transporter associated domain AS588_10680 SM00825 Beta-ketoacyl synthase AS588_10690 SM00422 helix_turn_helix, mercury resistance AS588_10695 SM01091 Transporter associated domain AS588_10700 SM00563 Phosphate acyltransferases AS588_10745 SM00257 Lysin motif AS588_10750 SM00098 Alkaline phosphatase homologues AS588_10770 SM00257 Lysin motif AS588_10790 SM00421 helix_turn_helix, Lux Regulon AS588_10790 SM00448 cheY-homologous receiver domain AS588_10795 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS588_10795 SM00387 Histidine kinase-like ATPases AS588_10840 SM00116 Domain in cystathionine beta-synthase and other proteins. AS588_10850 SM00363 S4 RNA-binding domain AS588_10890 SM00267 diguanylate cyclase AS588_10900 SM00357 Cold shock protein domain AS588_10910 SM00382 ATPases associated with a variety of cellular activities AS588_10915 SM00382 ATPases associated with a variety of cellular activities AS588_10920 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_10950 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_10960 SM00763 PrkA AAA domain AS588_10990 SM00567 E-Z type HEAT repeats AS588_11005 SM00530 Helix-turn-helix XRE-family like proteins AS588_11030 SM00062 Bacterial periplasmic substrate-binding proteins AS588_11035 SM00382 ATPases associated with a variety of cellular activities AS588_11045 SM01060 AS588_11045 AS588_11050 SM00382 ATPases associated with a variety of cellular activities AS588_11055 SM00382 ATPases associated with a variety of cellular activities AS588_11210 SM00829 Enoylreductase AS588_11250 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_11250 SM00895 AS588_11250 AS588_11255 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_11255 SM00866 AS588_11255 AS588_11290 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_11290 SM00895 AS588_11290 AS588_11295 SM01329 AS588_11295 AS588_11315 SM00422 helix_turn_helix, mercury resistance AS588_11330 SM00530 Helix-turn-helix XRE-family like proteins AS588_11335 SM00825 Beta-ketoacyl synthase AS588_11360 SM00382 ATPases associated with a variety of cellular activities AS588_11375 SM00421 helix_turn_helix, Lux Regulon AS588_11375 SM00448 cheY-homologous receiver domain AS588_11380 SM00387 Histidine kinase-like ATPases AS588_11435 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_11445 SM00422 helix_turn_helix, mercury resistance AS588_11450 SM00829 Enoylreductase AS588_11475 SM01130 AS588_11475 AS588_11530 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_11540 SM00342 helix_turn_helix, arabinose operon control protein AS588_11560 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_11560 SM00895 AS588_11560 AS588_11605 SM00450 Rhodanese Homology Domain AS588_11605 SM00849 Metallo-beta-lactamase superfamily AS588_11610 SM00450 Rhodanese Homology Domain AS588_11625 SM00357 Cold shock protein domain AS588_11655 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_11685 SM00860 SMI1 / KNR4 family AS588_11690 SM00901 AS588_11690 AS588_11750 SM00731 SprT homologues. AS588_11755 SM00316 Ribosomal protein S1-like RNA-binding domain AS588_11755 SM00732 Likely ribonuclease with RNase H fold. AS588_11760 SM00331 Sigma factor PP2C-like phosphatases AS588_11760 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AS588_11780 SM00331 Sigma factor PP2C-like phosphatases AS588_11785 SM00387 Histidine kinase-like ATPases AS588_11810 SM01005 Alanine racemase, C-terminal domain AS588_11840 SM00487 DEAD-like helicases superfamily AS588_11840 SM00490 helicase superfamily c-terminal domain AS588_11885 SM00382 ATPases associated with a variety of cellular activities AS588_11900 SM00448 cheY-homologous receiver domain AS588_11905 SM00091 PAS domain AS588_11905 SM00387 Histidine kinase-like ATPases AS588_12020 SM00267 diguanylate cyclase AS588_12030 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS588_12030 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS588_12030 SM00493 AS588_12030 AS588_12035 SM00344 helix_turn_helix ASNC type AS588_12105 SM00346 helix_turn_helix isocitrate lyase regulation AS588_12110 SM00797 Allophanate hydrolase subunit 2 AS588_12115 SM00796 Allophanate hydrolase subunit 1 AS588_12165 SM00420 helix_turn_helix, Deoxyribose operon repressor AS588_12200 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_12205 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS588_12235 SM00382 ATPases associated with a variety of cellular activities AS588_12260 SM00028 Tetratricopeptide repeats AS588_12265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS588_12265 SM00387 Histidine kinase-like ATPases AS588_12265 SM00388 His Kinase A (phosphoacceptor) domain AS588_12270 SM00448 cheY-homologous receiver domain AS588_12270 SM00862 Transcriptional regulatory protein, C terminal AS588_12280 SM00382 ATPases associated with a variety of cellular activities AS588_12295 SM00382 ATPases associated with a variety of cellular activities AS588_12305 SM00062 Bacterial periplasmic substrate-binding proteins AS588_12340 SM00710 Parallel beta-helix repeats AS588_12340 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AS588_12375 SM00062 Bacterial periplasmic substrate-binding proteins AS588_12385 SM00382 ATPases associated with a variety of cellular activities AS588_12410 SM00823 Phosphopantetheine attachment site AS588_12420 SM00823 Phosphopantetheine attachment site AS588_12420 SM01294 AS588_12420 AS588_12430 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AS588_12470 SM00833 Cobalamin synthesis protein cobW C-terminal domain AS588_12575 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_12590 SM00632 AS588_12590 AS588_12590 SM00642 Alpha-amylase domain AS588_12620 SM00116 Domain in cystathionine beta-synthase and other proteins. AS588_12620 SM00382 ATPases associated with a variety of cellular activities AS588_12670 SM00382 ATPases associated with a variety of cellular activities AS588_12680 SM00642 Alpha-amylase domain AS588_12690 SM00028 Tetratricopeptide repeats AS588_12815 SM00448 cheY-homologous receiver domain AS588_12820 SM00387 Histidine kinase-like ATPases AS588_12855 SM00450 Rhodanese Homology Domain AS588_12890 SM00530 Helix-turn-helix XRE-family like proteins AS588_12980 SM00382 ATPases associated with a variety of cellular activities AS588_12985 SM00421 helix_turn_helix, Lux Regulon AS588_12985 SM00448 cheY-homologous receiver domain AS588_13005 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_13140 SM00342 helix_turn_helix, arabinose operon control protein AS588_13175 SM00829 Enoylreductase AS588_13215 SM01251 AS588_13215 AS588_13230 SM00646 AS588_13230 AS588_13270 SM00382 ATPases associated with a variety of cellular activities AS588_13275 SM00382 ATPases associated with a variety of cellular activities AS588_13285 SM00662 RNA polymerases D AS588_13305 SM00316 Ribosomal protein S1-like RNA-binding domain AS588_13360 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AS588_13365 SM01374 AS588_13365 AS588_13385 SM00322 K homology RNA-binding domain AS588_13400 SM01382 AS588_13400 AS588_13400 SM01383 AS588_13400 AS588_13420 SM01403 AS588_13420 AS588_13435 SM00838 Elongation factor G C-terminus AS588_13435 SM00889 Elongation factor G, domain IV AS588_13455 SM00663 RNA polymerase I subunit A N-terminus AS588_13485 SM00649 Ribosomal protein L11/L12 AS588_13490 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AS588_13490 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AS588_13515 SM00967 RNA 2'-O ribose methyltransferase substrate binding AS588_13520 SM00535 Ribonuclease III family AS588_13525 SM00840 AS588_13525 AS588_13550 SM00670 Large family of predicted nucleotide-binding domains AS588_13560 SM00382 ATPases associated with a variety of cellular activities AS588_13565 SM00382 ATPases associated with a variety of cellular activities AS588_13565 SM01086 C-terminal, D2-small domain, of ClpB protein AS588_13670 SM00530 Helix-turn-helix XRE-family like proteins AS588_13680 SM00905 Dihydroneopterin aldolase AS588_13725 SM00382 ATPases associated with a variety of cellular activities AS588_13735 SM00977 TilS substrate C-terminal domain AS588_13740 SM00220 Serine/Threonine protein kinases, catalytic domain AS588_13750 SM00331 Sigma factor PP2C-like phosphatases AS588_13750 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AS588_13765 SM00316 Ribosomal protein S1-like RNA-binding domain AS588_13785 SM00363 S4 RNA-binding domain AS588_13800 SM00966 SpoVT / AbrB like domain AS588_13805 SM00487 DEAD-like helicases superfamily AS588_13805 SM00490 helicase superfamily c-terminal domain AS588_13805 SM00982 AS588_13805 AS588_13805 SM01058 CarD-like/TRCF domain AS588_13825 SM01400 AS588_13825 AS588_13870 SM00650 Ribosomal RNA adenine dimethylases AS588_13875 SM00493 AS588_13875 AS588_13880 SM01208 AS588_13880 AS588_13895 SM00966 SpoVT / AbrB like domain AS588_13905 SM00465 GIY-YIG type nucleases (URI domain) AS588_14000 SM00493 AS588_14000 AS588_14030 SM00257 Lysin motif AS588_14030 SM00636 AS588_14030 AS588_14070 SM00936 Penicillin-binding protein 5, C-terminal domain AS588_14075 SM00116 Domain in cystathionine beta-synthase and other proteins. AS588_14075 SM01240 AS588_14075 AS588_14105 SM00244 prohibitin homologues AS588_14150 SM00047 Lysozyme subfamily 2 AS588_14160 SM00835 Cupin AS588_14175 SM00028 Tetratricopeptide repeats AS588_14220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS588_14220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS588_14220 SM00319 Homologues of the ligand binding domain of Tar AS588_14225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS588_14225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS588_14225 SM00319 Homologues of the ligand binding domain of Tar AS588_14230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AS588_14230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS588_14230 SM00319 Homologues of the ligand binding domain of Tar AS588_14255 SM00642 Alpha-amylase domain AS588_14260 SM01091 Transporter associated domain AS588_14325 SM00316 Ribosomal protein S1-like RNA-binding domain AS588_14335 SM00344 helix_turn_helix ASNC type AS588_14355 SM00387 Histidine kinase-like ATPases AS588_14355 SM00388 His Kinase A (phosphoacceptor) domain AS588_14360 SM01298 AS588_14360 AS588_14365 SM00479 AS588_14365 AS588_14390 SM00091 PAS domain AS588_14390 SM00387 Histidine kinase-like ATPases AS588_14395 SM00448 cheY-homologous receiver domain AS588_14405 SM00382 ATPases associated with a variety of cellular activities AS588_14465 SM00421 helix_turn_helix, Lux Regulon AS588_14465 SM00448 cheY-homologous receiver domain AS588_14470 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS588_14470 SM00387 Histidine kinase-like ATPases AS588_14535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS588_14580 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AS588_14580 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AS588_14590 SM00923 MbtH-like protein AS588_14595 SM00823 Phosphopantetheine attachment site AS588_14595 SM00824 Thioesterase AS588_14615 SM00822 AS588_14615 AS588_14675 SM01240 AS588_14675 AS588_14690 SM00382 ATPases associated with a variety of cellular activities AS588_14710 SM00422 helix_turn_helix, mercury resistance AS588_14800 SM00729 Elongator protein 3, MiaB family, Radical SAM AS588_14870 SM00382 ATPases associated with a variety of cellular activities AS588_14875 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_14875 SM00866 AS588_14875 AS588_14905 SM00422 helix_turn_helix, mercury resistance AS588_14915 SM00465 GIY-YIG type nucleases (URI domain) AS588_14955 SM00382 ATPases associated with a variety of cellular activities AS588_14975 SM00382 ATPases associated with a variety of cellular activities AS588_14975 SM00930 AS588_14975 AS588_14990 SM00493 AS588_14990 AS588_15045 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_15075 SM00382 ATPases associated with a variety of cellular activities AS588_15100 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS588_15105 SM00448 cheY-homologous receiver domain AS588_15105 SM00862 Transcriptional regulatory protein, C terminal AS588_15110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS588_15110 SM00387 Histidine kinase-like ATPases AS588_15110 SM00388 His Kinase A (phosphoacceptor) domain AS588_15145 SM00421 helix_turn_helix, Lux Regulon AS588_15145 SM00448 cheY-homologous receiver domain AS588_15150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS588_15150 SM00387 Histidine kinase-like ATPases AS588_15185 SM00382 ATPases associated with a variety of cellular activities AS588_15210 SM00387 Histidine kinase-like ATPases AS588_15210 SM00388 His Kinase A (phosphoacceptor) domain AS588_15215 SM00448 cheY-homologous receiver domain AS588_15215 SM00862 Transcriptional regulatory protein, C terminal AS588_15230 SM00835 Cupin AS588_15240 SM00382 ATPases associated with a variety of cellular activities AS588_15300 SM00421 helix_turn_helix, Lux Regulon AS588_15300 SM00448 cheY-homologous receiver domain AS588_15310 SM00382 ATPases associated with a variety of cellular activities AS588_15410 SM00530 Helix-turn-helix XRE-family like proteins AS588_15445 SM00382 ATPases associated with a variety of cellular activities AS588_15460 SM00062 Bacterial periplasmic substrate-binding proteins AS588_15465 SM00062 Bacterial periplasmic substrate-binding proteins AS588_15510 SM00316 Ribosomal protein S1-like RNA-binding domain AS588_15510 SM00357 Cold shock protein domain AS588_15510 SM00955 AS588_15510 AS588_15525 SM00530 Helix-turn-helix XRE-family like proteins AS588_15530 SM00530 Helix-turn-helix XRE-family like proteins AS588_15535 SM00530 Helix-turn-helix XRE-family like proteins AS588_15545 SM00387 Histidine kinase-like ATPases AS588_15545 SM00388 His Kinase A (phosphoacceptor) domain AS588_15550 SM00448 cheY-homologous receiver domain AS588_15550 SM00862 Transcriptional regulatory protein, C terminal AS588_15565 SM00382 ATPases associated with a variety of cellular activities AS588_15585 SM00116 Domain in cystathionine beta-synthase and other proteins. AS588_15585 SM00382 ATPases associated with a variety of cellular activities AS588_15610 SM00116 Domain in cystathionine beta-synthase and other proteins. AS588_15610 SM00382 ATPases associated with a variety of cellular activities AS588_15685 SM00984 UDP binding domain AS588_15695 SM01192 AS588_15695 AS588_15695 SM01193 AS588_15695 AS588_15720 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS588_15735 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_15770 SM00354 helix_turn _helix lactose operon repressor AS588_15820 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_15820 SM00895 AS588_15820 AS588_15915 SM00530 Helix-turn-helix XRE-family like proteins AS588_15995 SM00640 Glycosyl hydrolases family 32 AS588_16005 SM00354 helix_turn _helix lactose operon repressor AS588_16045 SM00947 Carbonic anhydrase AS588_16100 SM00028 Tetratricopeptide repeats AS588_16105 SM00387 Histidine kinase-like ATPases AS588_16105 SM00388 His Kinase A (phosphoacceptor) domain AS588_16110 SM00448 cheY-homologous receiver domain AS588_16110 SM00862 Transcriptional regulatory protein, C terminal AS588_16120 SM00382 ATPases associated with a variety of cellular activities AS588_16200 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_16200 SM00866 AS588_16200 AS588_16240 SM00382 ATPases associated with a variety of cellular activities AS588_16245 SM00487 DEAD-like helicases superfamily AS588_16245 SM00490 helicase superfamily c-terminal domain AS588_16290 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS588_16300 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS588_16300 SM00245 tail specific protease AS588_16305 SM00710 Parallel beta-helix repeats AS588_16315 SM00382 ATPases associated with a variety of cellular activities AS588_16330 SM00937 AS588_16330 AS588_16335 SM00957 SecA DEAD-like domain AS588_16335 SM00958 SecA preprotein cross-linking domain AS588_16420 SM00487 DEAD-like helicases superfamily AS588_16420 SM00490 helicase superfamily c-terminal domain AS588_16430 SM00421 helix_turn_helix, Lux Regulon AS588_16430 SM00448 cheY-homologous receiver domain AS588_16435 SM00387 Histidine kinase-like ATPases AS588_16475 SM00984 UDP binding domain AS588_16495 SM00646 AS588_16495 AS588_16525 SM00382 ATPases associated with a variety of cellular activities AS588_16560 SM00047 Lysozyme subfamily 2 AS588_16560 SM00287 Bacterial SH3 domain homologues AS588_16615 SM00854 Bacterial capsule synthesis protein PGA_cap AS588_16645 SM00354 helix_turn _helix lactose operon repressor AS588_16660 SM00382 ATPases associated with a variety of cellular activities AS588_16675 SM00287 Bacterial SH3 domain homologues AS588_16725 SM00903 Flavin reductase like domain AS588_16740 SM00344 helix_turn_helix ASNC type AS588_16785 SM00860 SMI1 / KNR4 family AS588_16830 SM00984 UDP binding domain AS588_16855 SM00487 DEAD-like helicases superfamily AS588_16855 SM00490 helicase superfamily c-terminal domain AS588_16865 SM00420 helix_turn_helix, Deoxyribose operon repressor AS588_16865 SM01134 AS588_16865 AS588_16895 SM00028 Tetratricopeptide repeats AS588_16920 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_16950 SM00938 Nitrogen regulatory protein P-II AS588_16960 SM00014 Acid phosphatase homologues AS588_16990 SM00155 Phospholipase D. Active site motifs. AS588_17040 SM00028 Tetratricopeptide repeats AS588_17045 SM00729 Elongator protein 3, MiaB family, Radical SAM AS588_17055 SM00327 von Willebrand factor (vWF) type A domain AS588_17060 SM00327 von Willebrand factor (vWF) type A domain AS588_17095 SM00382 ATPases associated with a variety of cellular activities AS588_17155 SM00226 Low molecular weight phosphatase family AS588_17195 SM00937 AS588_17195 AS588_17215 SM00919 Malic enzyme, NAD binding domain AS588_17215 SM01274 AS588_17215 AS588_17230 SM00357 Cold shock protein domain AS588_17230 SM00382 ATPases associated with a variety of cellular activities AS588_17230 SM00959 Rho termination factor, N-terminal domain AS588_17255 SM00448 cheY-homologous receiver domain AS588_17280 SM00155 Phospholipase D. Active site motifs. AS588_17295 SM00382 ATPases associated with a variety of cellular activities AS588_17300 SM00155 Phospholipase D. Active site motifs. AS588_17340 SM00100 Cyclic nucleotide-monophosphate binding domain AS588_17340 SM00419 helix_turn_helix, cAMP Regulatory protein AS588_17350 SM00836 DALR anticodon binding domain AS588_17350 SM01016 Arginyl tRNA synthetase N terminal dom AS588_17360 SM00028 Tetratricopeptide repeats AS588_17370 SM00530 Helix-turn-helix XRE-family like proteins AS588_17395 SM00421 helix_turn_helix, Lux Regulon AS588_17435 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_17455 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS588_17565 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS588_17605 SM00858 AS588_17605 AS588_17650 SM00986 Uracil DNA glycosylase superfamily AS588_17650 SM00987 UreE urease accessory protein, C-terminal domain AS588_17685 SM00640 Glycosyl hydrolases family 32 AS588_17695 SM01061 CAT RNA binding domain AS588_17830 SM00422 helix_turn_helix, mercury resistance AS588_17835 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AS588_17860 SM00954 Region found in RelA / SpoT proteins AS588_17945 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS588_17990 SM01060 AS588_17990 AS588_18010 SM00382 ATPases associated with a variety of cellular activities AS588_18015 SM00382 ATPases associated with a variety of cellular activities AS588_18040 SM00382 ATPases associated with a variety of cellular activities AS588_18100 SM01060 AS588_18100 AS588_18125 SM00487 DEAD-like helicases superfamily AS588_18125 SM00490 helicase superfamily c-terminal domain AS588_18195 SM00656 AS588_18195 AS588_18215 SM00487 DEAD-like helicases superfamily AS588_18215 SM00490 helicase superfamily c-terminal domain AS588_18260 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AS588_18270 SM01133 AS588_18270 AS588_18325 SM00382 ATPases associated with a variety of cellular activities AS588_18330 SM00387 Histidine kinase-like ATPases AS588_18335 SM00448 cheY-homologous receiver domain AS588_18335 SM00862 Transcriptional regulatory protein, C terminal AS588_18390 SM00420 helix_turn_helix, Deoxyribose operon repressor AS588_18390 SM01134 AS588_18390 AS588_18405 SM00387 Histidine kinase-like ATPases AS588_18420 SM00421 helix_turn_helix, Lux Regulon AS588_18420 SM00448 cheY-homologous receiver domain AS588_18445 SM00564 beta-propeller repeat AS588_18455 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS588_18500 SM01092 CO dehydrogenase flavoprotein C-terminal domain AS588_18505 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AS588_18555 SM00487 DEAD-like helicases superfamily AS588_18555 SM00491 AS588_18555 AS588_18595 SM00028 Tetratricopeptide repeats AS588_18620 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS588_18625 SM00382 ATPases associated with a variety of cellular activities AS588_18630 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AS588_18635 SM00382 ATPases associated with a variety of cellular activities AS588_18655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS588_18655 SM00387 Histidine kinase-like ATPases AS588_18655 SM00388 His Kinase A (phosphoacceptor) domain AS588_18665 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS588_18670 SM00849 Metallo-beta-lactamase superfamily AS588_18685 SM00091 PAS domain AS588_18685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS588_18685 SM00387 Histidine kinase-like ATPases AS588_18685 SM00388 His Kinase A (phosphoacceptor) domain AS588_18690 SM00448 cheY-homologous receiver domain AS588_18690 SM00862 Transcriptional regulatory protein, C terminal AS588_18720 SM00788 Adenylosuccinate synthetase AS588_18730 SM00382 ATPases associated with a variety of cellular activities AS588_18785 SM00267 diguanylate cyclase AS588_18805 SM01131 AS588_18805 AS588_18820 SM00640 Glycosyl hydrolases family 32 AS588_18825 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_18825 SM00895 AS588_18825 AS588_18850 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_18860 SM00347 helix_turn_helix multiple antibiotic resistance protein AS588_18895 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS588_18950 SM00354 helix_turn _helix lactose operon repressor AS588_18965 SM00342 helix_turn_helix, arabinose operon control protein AS588_18990 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AS588_19015 SM00470 ParB-like nuclease domain AS588_19025 SM00470 ParB-like nuclease domain AS588_19035 SM01228 AS588_19035 AS588_19045 SM00393 Putative single-stranded nucleic acids-binding domain AS588_19045 SM01245 AS588_19045 AS588_19060 SM00028 Tetratricopeptide repeats