locus-tag class description KHS93_00005 PF00308 Bacterial dnaA protein KHS93_00005 PF08299 Bacterial dnaA protein helix-turn-helix KHS93_00005 PF11638 DnaA N-terminal domain KHS93_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KHS93_00010 PF02767 DNA polymerase III beta subunit, central domain KHS93_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KHS93_00020 PF02463 RecF/RecN/SMC N terminal domain KHS93_00025 PF04025 Domain of unknown function (DUF370) KHS93_00030 PF00204 DNA gyrase B KHS93_00030 PF00986 DNA gyrase B subunit, carboxyl terminus KHS93_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_00030 PF01751 Toprim domain KHS93_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller KHS93_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A KHS93_00065 PF14175 YaaC-like Protein KHS93_00070 PF00571 CBS domain KHS93_00070 PF00478 IMP dehydrogenase / GMP reductase domain KHS93_00075 PF07943 Penicillin-binding protein 5, C-terminal domain KHS93_00075 PF00768 D-alanyl-D-alanine carboxypeptidase KHS93_00080 PF01680 SOR/SNZ family KHS93_00085 PF01174 SNO glutamine amidotransferase family KHS93_00090 PF02403 Seryl-tRNA synthetase N-terminal domain KHS93_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KHS93_00095 PF02595 Glycerate kinase family KHS93_00105 PF01712 Deoxynucleoside kinase KHS93_00110 PF01712 Deoxynucleoside kinase KHS93_00115 PF00704 Glycosyl hydrolases family 18 KHS93_00115 PF01476 LysM domain KHS93_00120 PF00857 Isochorismatase family KHS93_00125 PF14437 MafB19-like deaminase KHS93_00135 PF12169 DNA polymerase III subunits gamma and tau domain III KHS93_00140 PF02575 YbaB/EbfC DNA-binding family KHS93_00145 PF02132 RecR protein KHS93_00145 PF13662 Toprim domain KHS93_00150 PF10704 Protein of unknown function (DUF2508) KHS93_00155 PF07441 SigmaK-factor processing regulatory protein BofA KHS93_00185 PF10764 Inhibitor of sigma-G Gin KHS93_00190 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein KHS93_00195 PF05816 Toxic anion resistance protein (TelA) KHS93_00200 PF01276 Orn/Lys/Arg decarboxylase, major domain KHS93_00200 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KHS93_00205 PF02223 Thymidylate kinase KHS93_00210 PF06153 Cyclic-di-AMP receptor KHS93_00215 PF03885 Protein of unknown function (DUF327) KHS93_00220 PF09115 DNA polymerase III, delta subunit, C terminal KHS93_00225 PF04468 PSP1 C-terminal conserved region KHS93_00230 PF06156 Initiation control protein YabA KHS93_00235 PF05175 Methyltransferase small domain KHS93_00240 PF01541 GIY-YIG catalytic domain KHS93_00245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KHS93_00250 PF18277 AbrB C-terminal domain KHS93_00250 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KHS93_00255 PF08264 Anticodon-binding domain of tRNA KHS93_00255 PF09334 tRNA synthetases class I (M) KHS93_00255 PF01588 Putative tRNA binding domain KHS93_00260 PF01026 TatD related DNase KHS93_00265 PF06725 3D domain KHS93_00265 PF03990 G5-linked-Ubiquitin-like domain KHS93_00265 PF07501 G5 domain KHS93_00270 PF13331 Domain of unknown function (DUF4093) KHS93_00270 PF13662 Toprim domain KHS93_00275 PF00398 Ribosomal RNA adenine dimethylase KHS93_00280 PF05582 YabG peptidase U57 KHS93_00285 PF06257 Biofilm formation stimulator VEG KHS93_00290 PF00269 Small, acid-soluble spore proteins, alpha/beta type KHS93_00295 PF08544 GHMP kinases C terminal KHS93_00295 PF00288 GHMP kinases N terminal domain KHS93_00300 PF00156 Phosphoribosyl transferase domain KHS93_00300 PF09182 Bacterial purine repressor, N-terminal KHS93_00305 PF01042 Endoribonuclease L-PSP KHS93_00310 PF04026 SpoVG KHS93_00315 PF00132 Bacterial transferase hexapeptide (six repeats) KHS93_00315 PF00483 Nucleotidyl transferase KHS93_00320 PF14572 Phosphoribosyl synthetase-associated domain KHS93_00320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KHS93_00325 PF14693 Ribosomal protein TL5, C-terminal domain KHS93_00325 PF01386 Ribosomal L25p family KHS93_00330 PF01195 Peptidyl-tRNA hydrolase KHS93_00335 PF10955 Protein of unknown function (DUF2757) KHS93_00340 PF02559 CarD-like/TRCF domain KHS93_00340 PF00270 DEAD/DEAH box helicase KHS93_00340 PF00271 Helicase conserved C-terminal domain KHS93_00340 PF03461 TRCF domain KHS93_00340 PF17757 UvrB interaction domain KHS93_00345 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KHS93_00345 PF15714 Stage V sporulation protein T C-terminal, transcription factor KHS93_00350 PF01943 Polysaccharide biosynthesis protein KHS93_00350 PF14667 Polysaccharide biosynthesis C-terminal domain KHS93_00355 PF03819 MazG nucleotide pyrophosphohydrolase domain KHS93_00355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KHS93_00360 PF01479 S4 domain KHS93_00365 PF07873 YabP family KHS93_00370 PF09578 Spore cortex protein YabQ (Spore_YabQ) KHS93_00375 PF04977 Septum formation initiator KHS93_00380 PF00575 S1 RNA binding domain KHS93_00395 PF07228 Stage II sporulation protein E (SpoIIE) KHS93_00400 PF00092 von Willebrand factor type A domain KHS93_00405 PF00069 Protein kinase domain KHS93_00410 PF01171 PP-loop family KHS93_00410 PF09179 TilS substrate binding domain KHS93_00410 PF11734 TilS substrate C-terminal domain KHS93_00415 PF00156 Phosphoribosyl transferase domain KHS93_00420 PF00004 ATPase family associated with various cellular activities (AAA) KHS93_00420 PF17862 AAA+ lid domain KHS93_00420 PF06480 FtsH Extracellular KHS93_00420 PF01434 Peptidase family M41 KHS93_00425 PF03309 Type III pantothenate kinase KHS93_00430 PF01430 Hsp33 protein KHS93_00435 PF13145 PPIC-type PPIASE domain KHS93_00440 PF00291 Pyridoxal-phosphate dependent enzyme KHS93_00445 PF04715 Anthranilate synthase component I, N terminal region KHS93_00445 PF00425 chorismate binding enzyme KHS93_00450 PF00117 Glutamine amidotransferase class-I KHS93_00455 PF01063 Amino-transferase class IV KHS93_00460 PF00809 Pterin binding enzyme KHS93_00465 PF02152 Dihydroneopterin aldolase KHS93_00470 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KHS93_00475 PF01381 Helix-turn-helix KHS93_00480 PF01207 Dihydrouridine synthase (Dus) KHS93_00485 PF00152 tRNA synthetases class II (D, K and N) KHS93_00485 PF01336 OB-fold nucleic acid binding domain KHS93_00565 PF05848 CtsR N-terminal HTH domain KHS93_00565 PF17727 CtsR C-terminal dimerization domain KHS93_00570 PF02151 UvrB/uvrC motif KHS93_00575 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KHS93_00580 PF00004 ATPase family associated with various cellular activities (AAA) KHS93_00580 PF07724 AAA domain (Cdc48 subfamily) KHS93_00580 PF17871 AAA lid domain KHS93_00580 PF02861 Clp amino terminal domain, pathogenicity island component KHS93_00580 PF10431 C-terminal, D2-small domain, of ClpB protein KHS93_00590 PF02457 DisA bacterial checkpoint controller nucleotide-binding KHS93_00590 PF10635 DisA bacterial checkpoint controller linker region KHS93_00600 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KHS93_00605 PF02542 YgbB family KHS93_00610 PF00749 tRNA synthetases class I (E and Q), catalytic domain KHS93_00615 PF00132 Bacterial transferase hexapeptide (six repeats) KHS93_00615 PF06426 Serine acetyltransferase, N-terminal KHS93_00620 PF09190 DALR domain KHS93_00620 PF01406 tRNA synthetases class I (C) catalytic domain KHS93_00625 PF00636 Ribonuclease III domain KHS93_00630 PF08032 RNA 2'-O ribose methyltransferase substrate binding KHS93_00630 PF00588 SpoU rRNA Methylase family KHS93_00635 PF05991 YacP-like NYN domain KHS93_00640 PF04542 Sigma-70 region 2 KHS93_00640 PF08281 Sigma-70, region 4 KHS93_00645 PF00471 Ribosomal protein L33 KHS93_00650 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KHS93_00655 PF00467 KOW motif KHS93_00655 PF02357 Transcription termination factor nusG KHS93_00660 PF00298 Ribosomal protein L11, RNA binding domain KHS93_00660 PF03946 Ribosomal protein L11, N-terminal domain KHS93_00665 PF00687 Ribosomal protein L1p/L10e family KHS93_00670 PF00466 Ribosomal protein L10 KHS93_00675 PF00542 Ribosomal protein L7/L12 C-terminal domain KHS93_00675 PF16320 Ribosomal protein L7/L12 dimerisation domain KHS93_00680 PF05175 Methyltransferase small domain KHS93_00685 PF00562 RNA polymerase Rpb2, domain 6 KHS93_00685 PF04560 RNA polymerase Rpb2, domain 7 KHS93_00685 PF10385 RNA polymerase beta subunit external 1 domain KHS93_00685 PF04563 RNA polymerase beta subunit KHS93_00685 PF04561 RNA polymerase Rpb2, domain 2 KHS93_00685 PF04565 RNA polymerase Rpb2, domain 3 KHS93_00690 PF04997 RNA polymerase Rpb1, domain 1 KHS93_00690 PF00623 RNA polymerase Rpb1, domain 2 KHS93_00690 PF04983 RNA polymerase Rpb1, domain 3 KHS93_00690 PF05000 RNA polymerase Rpb1, domain 4 KHS93_00690 PF04998 RNA polymerase Rpb1, domain 5 KHS93_00695 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KHS93_00700 PF00164 Ribosomal protein S12/S23 KHS93_00705 PF00177 Ribosomal protein S7p/S5e KHS93_00710 PF03144 Elongation factor Tu domain 2 KHS93_00710 PF03764 Elongation factor G, domain IV KHS93_00710 PF00009 Elongation factor Tu GTP binding domain KHS93_00710 PF00679 Elongation factor G C-terminus KHS93_00710 PF14492 Elongation Factor G, domain II KHS93_00715 PF00009 Elongation factor Tu GTP binding domain KHS93_00715 PF03144 Elongation factor Tu domain 2 KHS93_00715 PF03143 Elongation factor Tu C-terminal domain KHS93_00720 PF12146 Serine aminopeptidase, S33 KHS93_00725 PF00338 Ribosomal protein S10p/S20e KHS93_00730 PF00297 Ribosomal protein L3 KHS93_00735 PF00573 Ribosomal protein L4/L1 family KHS93_00740 PF00276 Ribosomal protein L23 KHS93_00745 PF00181 Ribosomal Proteins L2, RNA binding domain KHS93_00745 PF03947 Ribosomal Proteins L2, C-terminal domain KHS93_00750 PF00203 Ribosomal protein S19 KHS93_00755 PF00237 Ribosomal protein L22p/L17e KHS93_00760 PF00189 Ribosomal protein S3, C-terminal domain KHS93_00760 PF07650 KH domain KHS93_00765 PF00252 Ribosomal protein L16p/L10e KHS93_00770 PF00831 Ribosomal L29 protein KHS93_00775 PF00366 Ribosomal protein S17 KHS93_00780 PF00238 Ribosomal protein L14p/L23e KHS93_00785 PF00467 KOW motif KHS93_00785 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KHS93_00790 PF00281 Ribosomal protein L5 KHS93_00790 PF00673 ribosomal L5P family C-terminus KHS93_00795 PF00253 Ribosomal protein S14p/S29e KHS93_00800 PF00410 Ribosomal protein S8 KHS93_00805 PF00347 Ribosomal protein L6 KHS93_00810 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KHS93_00815 PF00333 Ribosomal protein S5, N-terminal domain KHS93_00815 PF03719 Ribosomal protein S5, C-terminal domain KHS93_00820 PF00327 Ribosomal protein L30p/L7e KHS93_00825 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KHS93_00830 PF00344 SecY translocase KHS93_00835 PF05191 Adenylate kinase, active site lid KHS93_00840 PF00557 Metallopeptidase family M24 KHS93_00845 PF01176 Translation initiation factor 1A / IF-1 KHS93_00850 PF00444 Ribosomal protein L36 KHS93_00855 PF00416 Ribosomal protein S13/S18 KHS93_00860 PF00411 Ribosomal protein S11 KHS93_00865 PF01000 RNA polymerase Rpb3/RpoA insert domain KHS93_00865 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KHS93_00865 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KHS93_00870 PF01196 Ribosomal protein L17 KHS93_00875 PF00005 ABC transporter KHS93_00880 PF00005 ABC transporter KHS93_00885 PF02361 Cobalt transport protein KHS93_00890 PF01416 tRNA pseudouridine synthase KHS93_00895 PF00572 Ribosomal protein L13 KHS93_00900 PF00380 Ribosomal protein S9/S16 KHS93_00905 PF08241 Methyltransferase domain KHS93_00910 PF05163 DinB family KHS93_00915 PF10730 Protein of unknown function (DUF2521) KHS93_00920 PF01520 N-acetylmuramoyl-L-alanine amidase KHS93_00925 PF10609 NUBPL iron-transfer P-loop NTPase KHS93_00930 PF17898 Spore germination GerD central core domain KHS93_00935 PF14089 KinB-signalling pathway activation in sporulation KHS93_00940 PF01522 Polysaccharide deacetylase KHS93_01000 PF07690 Major Facilitator Superfamily KHS93_01005 PF00202 Aminotransferase class-III KHS93_01015 PF08240 Alcohol dehydrogenase GroES-like domain KHS93_01015 PF00107 Zinc-binding dehydrogenase KHS93_01020 PF01740 STAS domain KHS93_01020 PF00916 Sulfate permease family KHS93_01025 PF01758 Sodium Bile acid symporter family KHS93_01030 PF00756 Putative esterase KHS93_01035 PF01032 FecCD transport family KHS93_01040 PF01032 FecCD transport family KHS93_01045 PF01497 Periplasmic binding protein KHS93_01050 PF12833 Helix-turn-helix domain KHS93_01050 PF01497 Periplasmic binding protein KHS93_01055 PF07075 Protein of unknown function (DUF1343) KHS93_01060 PF00933 Glycosyl hydrolase family 3 N terminal domain KHS93_01060 PF01915 Glycosyl hydrolase family 3 C-terminal domain KHS93_01065 PF00144 Beta-lactamase KHS93_01070 PF00367 phosphotransferase system, EIIB KHS93_01070 PF02378 Phosphotransferase system, EIIC KHS93_01075 PF01380 SIS domain KHS93_01085 PF04463 Protein of unknown function (DUF523) KHS93_01115 PF04542 Sigma-70 region 2 KHS93_01115 PF08281 Sigma-70, region 4 KHS93_01120 PF13490 Putative zinc-finger KHS93_01125 PF02457 DisA bacterial checkpoint controller nucleotide-binding KHS93_01130 PF07949 YbbR-like protein KHS93_01135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KHS93_01135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KHS93_01135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KHS93_01135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KHS93_01140 PF01380 SIS domain KHS93_01145 PF00005 ABC transporter KHS93_01160 PF16226 Domain of unknown function (DUF4885) KHS93_01165 PF00248 Aldo/keto reductase family KHS93_01170 PF04172 LrgB-like family KHS93_01175 PF03788 LrgA family KHS93_01180 PF01047 MarR family KHS93_01185 PF00324 Amino acid permease KHS93_01190 PF13419 Haloacid dehalogenase-like hydrolase KHS93_01195 PF07730 Histidine kinase KHS93_01200 PF00072 Response regulator receiver domain KHS93_01200 PF00196 Bacterial regulatory proteins, luxR family KHS93_01205 PF00005 ABC transporter KHS93_01225 PF16219 Domain of unknown function (DUF4879) KHS93_01230 PF17334 Minor curli fiber component A KHS93_01245 PF13520 Amino acid permease KHS93_01250 PF03009 Glycerophosphoryl diester phosphodiesterase family KHS93_01255 PF07690 Major Facilitator Superfamily KHS93_01260 PF10852 Protein of unknown function (DUF2651) KHS93_01265 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal KHS93_01265 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal KHS93_01275 PF01471 Putative peptidoglycan binding domain KHS93_01275 PF08924 Domain of unknown function (DUF1906) KHS93_01290 PF00465 Iron-containing alcohol dehydrogenase KHS93_01295 PF02222 ATP-grasp domain KHS93_01300 PF01066 CDP-alcohol phosphatidyltransferase KHS93_01305 PF09335 SNARE associated Golgi protein KHS93_01310 PF02666 Phosphatidylserine decarboxylase KHS93_01320 PF00581 Rhodanese-like domain KHS93_01320 PF17773 UPF0176 acylphosphatase like domain KHS93_01320 PF12368 Rhodanase C-terminal KHS93_01325 PF00375 Sodium:dicarboxylate symporter family KHS93_01330 PF01063 Amino-transferase class IV KHS93_01335 PF00324 Amino acid permease KHS93_01340 PF02574 Homocysteine S-methyltransferase KHS93_01345 PF01235 Sodium:alanine symporter family KHS93_01350 PF04960 Glutaminase KHS93_01355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_01360 PF00072 Response regulator receiver domain KHS93_01360 PF08664 YcbB domain KHS93_01365 PF01636 Phosphotransferase enzyme family KHS93_01370 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein KHS93_01375 PF16916 Dimerisation domain of Zinc Transporter KHS93_01375 PF01545 Cation efflux family KHS93_01380 PF00881 Nitroreductase family KHS93_01385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHS93_01390 PF07681 DoxX KHS93_01395 PF00085 Thioredoxin KHS93_01405 PF10710 Protein of unknown function (DUF2512) KHS93_01410 PF07486 Cell Wall Hydrolase KHS93_01415 PF09423 PhoD-like phosphatase KHS93_01415 PF16655 PhoD-like phosphatase, N-terminal domain KHS93_01420 PF02416 mttA/Hcf106 family KHS93_01425 PF00902 Sec-independent protein translocase protein (TatC) KHS93_01430 PF01470 Pyroglutamyl peptidase KHS93_01435 PF00266 Aminotransferase class-V KHS93_01440 PF07690 Major Facilitator Superfamily KHS93_01445 PF00440 Bacterial regulatory proteins, tetR family KHS93_01450 PF00710 Asparaginase, N-terminal KHS93_01450 PF17763 Glutaminase/Asparaginase C-terminal domain KHS93_01455 PF01674 Lipase (class 2) KHS93_01460 PF02810 SEC-C motif KHS93_01460 PF05225 helix-turn-helix, Psq domain KHS93_01465 PF00248 Aldo/keto reductase family KHS93_01470 PF17118 Domain of unknown function (DUF5105) KHS93_01470 PF11611 Domain of unknown function (DUF4352) KHS93_01475 PF16244 Domain of unknown function (DUF4901) KHS93_01480 PF16244 Domain of unknown function (DUF4901) KHS93_01485 PF13539 D-alanyl-D-alanine carboxypeptidase KHS93_01490 PF18801 response regulator aspartate phosphatase H, N terminal KHS93_01500 PF00128 Alpha amylase, catalytic domain KHS93_01505 PF01297 Zinc-uptake complex component A periplasmic KHS93_01510 PF00005 ABC transporter KHS93_01515 PF00950 ABC 3 transport family KHS93_01520 PF00296 Luciferase-like monooxygenase KHS93_01525 PF02342 TerD domain KHS93_01530 PF02342 TerD domain KHS93_01535 PF02342 TerD domain KHS93_01540 PF03741 Integral membrane protein TerC family KHS93_01545 PF14266 Putative component of 'biosynthetic module' KHS93_01550 PF05816 Toxic anion resistance protein (TelA) KHS93_01555 PF07690 Major Facilitator Superfamily KHS93_01560 PF00571 CBS domain KHS93_01560 PF00005 ABC transporter KHS93_01565 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_01570 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KHS93_01575 PF01546 Peptidase family M20/M25/M40 KHS93_01575 PF07687 Peptidase dimerisation domain KHS93_01580 PF03606 C4-dicarboxylate anaerobic carrier KHS93_01590 PF00128 Alpha amylase, catalytic domain KHS93_01590 PF16738 Starch-binding module 26 KHS93_01595 PF00056 lactate/malate dehydrogenase, NAD binding domain KHS93_01595 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KHS93_01600 PF07690 Major Facilitator Superfamily KHS93_01605 PF01047 MarR family KHS93_01610 PF01810 LysE type translocator KHS93_01615 PF08892 YqcI/YcgG family KHS93_01620 PF00324 Amino acid permease KHS93_01625 PF09347 Domain of unknown function (DUF1989) KHS93_01630 PF02540 NAD synthase KHS93_01635 PF12197 Bacillus cereus group antimicrobial protein KHS93_01650 PF07690 Major Facilitator Superfamily KHS93_01655 PF01202 Shikimate kinase KHS93_01660 PF05448 Acetyl xylan esterase (AXE1) KHS93_01665 PF10127 RNA repair pathway DNA polymerase beta family KHS93_01670 PF01619 Proline dehydrogenase KHS93_01675 PF00171 Aldehyde dehydrogenase family KHS93_01680 PF00474 Sodium:solute symporter family KHS93_01685 PF13556 PucR C-terminal helix-turn-helix domain KHS93_01685 PF17853 GGDEF-like domain KHS93_01690 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHS93_01695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KHS93_01700 PF00355 Rieske [2Fe-2S] domain KHS93_01705 PF18267 Rubredoxin NAD+ reductase C-terminal domain KHS93_01705 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHS93_01705 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KHS93_01705 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KHS93_01705 PF04324 BFD-like [2Fe-2S] binding domain KHS93_01710 PF07683 Cobalamin synthesis protein cobW C-terminal domain KHS93_01710 PF02492 CobW/HypB/UreG, nucleotide-binding domain KHS93_01715 PF00107 Zinc-binding dehydrogenase KHS93_01715 PF08240 Alcohol dehydrogenase GroES-like domain KHS93_01715 PF13823 Alcohol dehydrogenase GroES-associated KHS93_01720 PF06271 RDD family KHS93_01725 PF10925 Protein of unknown function (DUF2680) KHS93_01730 PF00232 Glycosyl hydrolase family 1 KHS93_01740 PF11033 Competence protein J (ComJ) KHS93_01745 PF14040 Deoxyribonuclease NucA/NucB KHS93_01750 PF01380 SIS domain KHS93_01755 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KHS93_01760 PF01638 HxlR-like helix-turn-helix KHS93_01765 PF00501 AMP-binding enzyme KHS93_01765 PF00550 Phosphopantetheine attachment site KHS93_01765 PF00668 Condensation domain KHS93_01765 PF13193 AMP-binding enzyme C-terminal domain KHS93_01770 PF00501 AMP-binding enzyme KHS93_01770 PF13193 AMP-binding enzyme C-terminal domain KHS93_01770 PF00668 Condensation domain KHS93_01770 PF00550 Phosphopantetheine attachment site KHS93_01775 PF00501 AMP-binding enzyme KHS93_01775 PF13193 AMP-binding enzyme C-terminal domain KHS93_01775 PF00668 Condensation domain KHS93_01775 PF00550 Phosphopantetheine attachment site KHS93_01775 PF00975 Thioesterase domain KHS93_01780 PF00975 Thioesterase domain KHS93_01785 PF07685 CobB/CobQ-like glutamine amidotransferase domain KHS93_01785 PF00155 Aminotransferase class I and II KHS93_01785 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KHS93_01790 PF01648 4'-phosphopantetheinyl transferase superfamily KHS93_01800 PF00005 ABC transporter KHS93_01805 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_01810 PF00497 Bacterial extracellular solute-binding proteins, family 3 KHS93_01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_01815 PF03466 LysR substrate binding domain KHS93_01820 PF02441 Flavoprotein KHS93_01825 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KHS93_01840 PF00854 POT family KHS93_01845 PF13229 Right handed beta helix region KHS93_01845 PF12708 Pectate lyase superfamily protein KHS93_01855 PF03323 Bacillus/Clostridium GerA spore germination protein KHS93_01860 PF05504 Spore germination B3/ GerAC like, C-terminal KHS93_01865 PF03845 Spore germination protein KHS93_01870 PF00296 Luciferase-like monooxygenase KHS93_01875 PF00583 Acetyltransferase (GNAT) family KHS93_01880 PF00497 Bacterial extracellular solute-binding proteins, family 3 KHS93_01885 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_01890 PF00005 ABC transporter KHS93_01895 PF07687 Peptidase dimerisation domain KHS93_01895 PF01546 Peptidase family M20/M25/M40 KHS93_01900 PF03972 MmgE/PrpD family KHS93_01905 PF00005 ABC transporter KHS93_01910 PF02687 FtsX-like permease family KHS93_01910 PF12704 MacB-like periplasmic core domain KHS93_01915 PF00072 Response regulator receiver domain KHS93_01915 PF00486 Transcriptional regulatory protein, C terminal KHS93_01920 PF00672 HAMP domain KHS93_01920 PF00512 His Kinase A (phospho-acceptor) domain KHS93_01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_01925 PF18801 response regulator aspartate phosphatase H, N terminal KHS93_01930 PF11131 Rap-phr extracellular signalling KHS93_01935 PF09680 Family of unknown function KHS93_01940 PF13840 ACT domain KHS93_01940 PF00696 Amino acid kinase family KHS93_01945 PF01032 FecCD transport family KHS93_01950 PF01032 FecCD transport family KHS93_01955 PF00005 ABC transporter KHS93_01960 PF01497 Periplasmic binding protein KHS93_01965 PF07690 Major Facilitator Superfamily KHS93_01970 PF00440 Bacterial regulatory proteins, tetR family KHS93_01975 PF00881 Nitroreductase family KHS93_01980 PF03992 Antibiotic biosynthesis monooxygenase KHS93_01985 PF01022 Bacterial regulatory protein, arsR family KHS93_01990 PF00392 Bacterial regulatory proteins, gntR family KHS93_01990 PF00155 Aminotransferase class I and II KHS93_01995 PF00202 Aminotransferase class-III KHS93_02000 PF00171 Aldehyde dehydrogenase family KHS93_02005 PF06800 Sugar transport protein KHS93_02015 PF07987 Domain of unkown function (DUF1775) KHS93_02020 PF13115 YtkA-like KHS93_02020 PF05425 Copper resistance protein D KHS93_02020 PF04234 CopC domain KHS93_02025 PF05573 NosL KHS93_02025 PF08220 DeoR-like helix-turn-helix domain KHS93_02035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KHS93_02035 PF02378 Phosphotransferase system, EIIC KHS93_02040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KHS93_02045 PF01232 Mannitol dehydrogenase Rossmann domain KHS93_02045 PF08125 Mannitol dehydrogenase C-terminal domain KHS93_02050 PF07977 FabA-like domain KHS93_02065 PF03746 LamB/YcsF family KHS93_02070 PF01566 Natural resistance-associated macrophage protein KHS93_02075 PF07286 Protein of unknown function (DUF1445) KHS93_02080 PF02682 Carboxyltransferase domain, subdomain C and D KHS93_02085 PF02626 Carboxyltransferase domain, subdomain A and B KHS93_02090 PF01614 Bacterial transcriptional regulator KHS93_02090 PF09339 IclR helix-turn-helix domain KHS93_02095 PF13472 GDSL-like Lipase/Acylhydrolase family KHS93_02100 PF13129 Protein of unknown function (DUF3953) KHS93_02105 PF03992 Antibiotic biosynthesis monooxygenase KHS93_02110 PF03717 Penicillin-binding Protein dimerisation domain KHS93_02110 PF00905 Penicillin binding protein transpeptidase domain KHS93_02110 PF05223 NTF2-like N-terminal transpeptidase domain KHS93_02115 PF00248 Aldo/keto reductase family KHS93_02120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KHS93_02120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KHS93_02120 PF00874 PRD domain KHS93_02120 PF05043 Mga helix-turn-helix domain KHS93_02120 PF08279 HTH domain KHS93_02125 PF13193 AMP-binding enzyme C-terminal domain KHS93_02125 PF00501 AMP-binding enzyme KHS93_02140 PF13302 Acetyltransferase (GNAT) domain KHS93_02145 PF16242 Pyridoxamine 5'-phosphate oxidase like KHS93_02150 PF10997 Alternate to MurJ KHS93_02155 PF12823 Domain of unknown function (DUF3817) KHS93_02160 PF01037 Lrp/AsnC ligand binding domain KHS93_02165 PF01131 DNA topoisomerase KHS93_02165 PF01751 Toprim domain KHS93_02175 PF00990 Diguanylate cyclase, GGDEF domain KHS93_02180 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KHS93_02190 PF03170 Bacterial cellulose synthase subunit KHS93_02195 PF13520 Amino acid permease KHS93_02200 PF00293 NUDIX domain KHS93_02205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KHS93_02205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KHS93_02205 PF00205 Thiamine pyrophosphate enzyme, central domain KHS93_02235 PF01471 Putative peptidoglycan binding domain KHS93_02235 PF01510 N-acetylmuramoyl-L-alanine amidase KHS93_02255 PF13176 Tetratricopeptide repeat KHS93_02255 PF18801 response regulator aspartate phosphatase H, N terminal KHS93_02275 PF01566 Natural resistance-associated macrophage protein KHS93_02285 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) KHS93_02290 PF17314 Family of unknown function (DUF5360) KHS93_02295 PF00893 Small Multidrug Resistance protein KHS93_02300 PF12787 EcsC protein family KHS93_02305 PF10685 Stress-induced bacterial acidophilic repeat motif KHS93_02305 PF00477 Small hydrophilic plant seed protein KHS93_02310 PF07883 Cupin domain KHS93_02315 PF16291 Domain of unknown function (DUF4937 KHS93_02320 PF05067 Manganese containing catalase KHS93_02325 PF03480 Bacterial extracellular solute-binding protein, family 7 KHS93_02330 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KHS93_02330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_02330 PF17203 Single cache domain 3 KHS93_02335 PF08279 HTH domain KHS93_02335 PF00072 Response regulator receiver domain KHS93_02340 PF00375 Sodium:dicarboxylate symporter family KHS93_02345 PF01594 AI-2E family transporter KHS93_02350 PF00005 ABC transporter KHS93_02365 PF02770 Acyl-CoA dehydrogenase, middle domain KHS93_02365 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KHS93_02365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KHS93_02370 PF13040 Fur-regulated basic protein B KHS93_02380 PF01545 Cation efflux family KHS93_02380 PF16916 Dimerisation domain of Zinc Transporter KHS93_02385 PF00085 Thioredoxin KHS93_02390 PF01820 D-ala D-ala ligase N-terminus KHS93_02390 PF07478 D-ala D-ala ligase C-terminus KHS93_02395 PF08245 Mur ligase middle domain KHS93_02395 PF01225 Mur ligase family, catalytic domain KHS93_02395 PF02875 Mur ligase family, glutamate ligase domain KHS93_02400 PF00270 DEAD/DEAH box helicase KHS93_02400 PF00271 Helicase conserved C-terminal domain KHS93_02405 PF03703 Bacterial PH domain KHS93_02410 PF03703 Bacterial PH domain KHS93_02415 PF01694 Rhomboid family KHS93_02420 PF01648 4'-phosphopantetheinyl transferase superfamily KHS93_02430 PF00842 Alanine racemase, C-terminal domain KHS93_02430 PF01168 Alanine racemase, N-terminal domain KHS93_02435 PF01402 Ribbon-helix-helix protein, copG family KHS93_02440 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KHS93_02445 PF08678 Rsbr N terminal KHS93_02445 PF01740 STAS domain KHS93_02450 PF01740 STAS domain KHS93_02455 PF13581 Histidine kinase-like ATPase domain KHS93_02460 PF07228 Stage II sporulation protein E (SpoIIE) KHS93_02460 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain KHS93_02465 PF01740 STAS domain KHS93_02470 PF13581 Histidine kinase-like ATPase domain KHS93_02475 PF04539 Sigma-70 region 3 KHS93_02475 PF04542 Sigma-70 region 2 KHS93_02475 PF04545 Sigma-70, region 4 KHS93_02480 PF07228 Stage II sporulation protein E (SpoIIE) KHS93_02485 PF16921 Tex protein YqgF-like domain KHS93_02485 PF00575 S1 RNA binding domain KHS93_02485 PF09371 Tex-like protein N-terminal domain KHS93_02485 PF17674 HHH domain KHS93_02495 PF10263 SprT-like family KHS93_02535 PF18801 response regulator aspartate phosphatase H, N terminal KHS93_02540 PF02525 Flavodoxin-like fold KHS93_02550 PF00561 alpha/beta hydrolase fold KHS93_02555 PF02028 BCCT, betaine/carnitine/choline family transporter KHS93_02560 PF07690 Major Facilitator Superfamily KHS93_02565 PF07859 alpha/beta hydrolase fold KHS93_02570 PF02566 OsmC-like protein KHS93_02575 PF01047 MarR family KHS93_02585 PF02082 Transcriptional regulator KHS93_02590 PF13460 NAD(P)H-binding KHS93_02595 PF00313 'Cold-shock' DNA-binding domain KHS93_02605 PF02583 Metal-sensitive transcriptional repressor KHS93_02610 PF13686 DsrE/DsrF/DrsH-like family KHS93_02615 PF00581 Rhodanese-like domain KHS93_02615 PF17773 UPF0176 acylphosphatase like domain KHS93_02620 PF00581 Rhodanese-like domain KHS93_02620 PF01206 Sulfurtransferase TusA KHS93_02625 PF00581 Rhodanese-like domain KHS93_02625 PF00753 Metallo-beta-lactamase superfamily KHS93_02630 PF01206 Sulfurtransferase TusA KHS93_02635 PF01925 Sulfite exporter TauE/SafE KHS93_02640 PF01177 Asp/Glu/Hydantoin racemase KHS93_02655 PF01734 Patatin-like phospholipase KHS93_02665 PF00291 Pyridoxal-phosphate dependent enzyme KHS93_02670 PF07729 FCD domain KHS93_02670 PF00392 Bacterial regulatory proteins, gntR family KHS93_02675 PF01042 Endoribonuclease L-PSP KHS93_02685 PF07687 Peptidase dimerisation domain KHS93_02685 PF01546 Peptidase family M20/M25/M40 KHS93_02690 PF02311 AraC-like ligand binding domain KHS93_02690 PF12833 Helix-turn-helix domain KHS93_02695 PF01546 Peptidase family M20/M25/M40 KHS93_02695 PF07687 Peptidase dimerisation domain KHS93_02700 PF00392 Bacterial regulatory proteins, gntR family KHS93_02700 PF00155 Aminotransferase class I and II KHS93_02705 PF07690 Major Facilitator Superfamily KHS93_02725 PF08031 Berberine and berberine like KHS93_02725 PF01565 FAD binding domain KHS93_02730 PF16916 Dimerisation domain of Zinc Transporter KHS93_02730 PF01545 Cation efflux family KHS93_02750 PF00701 Dihydrodipicolinate synthetase family KHS93_02760 PF04055 Radical SAM superfamily KHS93_02775 PF08240 Alcohol dehydrogenase GroES-like domain KHS93_02775 PF00107 Zinc-binding dehydrogenase KHS93_02780 PF13411 MerR HTH family regulatory protein KHS93_02790 PF00155 Aminotransferase class I and II KHS93_02790 PF00392 Bacterial regulatory proteins, gntR family KHS93_02800 PF07690 Major Facilitator Superfamily KHS93_02805 PF16859 Tetracyclin repressor-like, C-terminal domain KHS93_02805 PF00440 Bacterial regulatory proteins, tetR family KHS93_02810 PF07875 Coat F domain KHS93_02820 PF13823 Alcohol dehydrogenase GroES-associated KHS93_02820 PF08240 Alcohol dehydrogenase GroES-like domain KHS93_02820 PF00107 Zinc-binding dehydrogenase KHS93_02825 PF07875 Coat F domain KHS93_02835 PF07730 Histidine kinase KHS93_02835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_02840 PF00072 Response regulator receiver domain KHS93_02840 PF00196 Bacterial regulatory proteins, luxR family KHS93_02845 PF03176 MMPL family KHS93_02850 PF07722 Peptidase C26 KHS93_02855 PF00005 ABC transporter KHS93_02855 PF12848 ABC transporter KHS93_02860 PF13302 Acetyltransferase (GNAT) domain KHS93_02865 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHS93_02865 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHS93_02870 PF00465 Iron-containing alcohol dehydrogenase KHS93_02875 PF07690 Major Facilitator Superfamily KHS93_02880 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_02880 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_02890 PF01925 Sulfite exporter TauE/SafE KHS93_02895 PF00583 Acetyltransferase (GNAT) family KHS93_02900 PF06445 GyrI-like small molecule binding domain KHS93_02900 PF13411 MerR HTH family regulatory protein KHS93_02905 PF00892 EamA-like transporter family KHS93_02910 PF00293 NUDIX domain KHS93_02915 PF08241 Methyltransferase domain KHS93_02920 PF00180 Isocitrate/isopropylmalate dehydrogenase KHS93_02925 PF07729 FCD domain KHS93_02925 PF00392 Bacterial regulatory proteins, gntR family KHS93_02930 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KHS93_02945 PF11954 Domain of unknown function (DUF3471) KHS93_02945 PF00144 Beta-lactamase KHS93_02955 PF07563 Protein of unknown function (DUF1541) KHS93_02960 PF07690 Major Facilitator Superfamily KHS93_02965 PF07702 UTRA domain KHS93_02965 PF00392 Bacterial regulatory proteins, gntR family KHS93_02970 PF00392 Bacterial regulatory proteins, gntR family KHS93_02970 PF07729 FCD domain KHS93_02975 PF07690 Major Facilitator Superfamily KHS93_02980 PF00893 Small Multidrug Resistance protein KHS93_02985 PF00893 Small Multidrug Resistance protein KHS93_02990 PF00440 Bacterial regulatory proteins, tetR family KHS93_02990 PF17934 Tetracyclin repressor-like, C-terminal domain KHS93_02995 PF13520 Amino acid permease KHS93_03005 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KHS93_03010 PF00107 Zinc-binding dehydrogenase KHS93_03010 PF08240 Alcohol dehydrogenase GroES-like domain KHS93_03015 PF00083 Sugar (and other) transporter KHS93_03055 PF02769 AIR synthase related protein, C-terminal domain KHS93_03055 PF00586 AIR synthase related protein, N-terminal domain KHS93_03060 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KHS93_03065 PF00814 Glycoprotease family KHS93_03070 PF00583 Acetyltransferase (GNAT) family KHS93_03075 PF00814 Glycoprotease family KHS93_03080 PF00005 ABC transporter KHS93_03080 PF16326 ABC transporter C-terminal domain KHS93_03080 PF12848 ABC transporter KHS93_03085 PF01967 MoaC family KHS93_03090 PF02629 CoA binding domain KHS93_03090 PF06971 Putative DNA-binding protein N-terminus KHS93_03095 PF02416 mttA/Hcf106 family KHS93_03100 PF00902 Sec-independent protein translocase protein (TatC) KHS93_03105 PF14146 Domain of unknown function (DUF4305) KHS93_03110 PF02517 CPBP intramembrane metalloprotease KHS93_03115 PF00166 Chaperonin 10 Kd subunit KHS93_03120 PF00118 TCP-1/cpn60 chaperonin family KHS93_03125 PF01546 Peptidase family M20/M25/M40 KHS93_03125 PF07687 Peptidase dimerisation domain KHS93_03160 PF00881 Nitroreductase family KHS93_03170 PF00005 ABC transporter KHS93_03180 PF00931 NB-ARC domain KHS93_03180 PF13176 Tetratricopeptide repeat KHS93_03185 PF00107 Zinc-binding dehydrogenase KHS93_03185 PF08240 Alcohol dehydrogenase GroES-like domain KHS93_03195 PF00294 pfkB family carbohydrate kinase KHS93_03200 PF14154 Domain of unknown function (DUF4306) KHS93_03205 PF04012 PspA/IM30 family KHS93_03210 PF08271 TFIIB zinc-binding KHS93_03215 PF04536 TPM domain KHS93_03220 PF13421 SPFH domain-Band 7 family KHS93_03225 PF01757 Acyltransferase family KHS93_03230 PF13739 Deacetylase PdaC KHS93_03230 PF11738 Protein of unknown function (DUF3298) KHS93_03235 PF08281 Sigma-70, region 4 KHS93_03235 PF04542 Sigma-70 region 2 KHS93_03240 PF00107 Zinc-binding dehydrogenase KHS93_03240 PF08240 Alcohol dehydrogenase GroES-like domain KHS93_03245 PF03330 Lytic transglycolase KHS93_03250 PF07676 WD40-like Beta Propeller Repeat KHS93_03260 PF14169 Cold-inducible protein YdjO KHS93_03265 PF07732 Multicopper oxidase KHS93_03265 PF07731 Multicopper oxidase KHS93_03265 PF00394 Multicopper oxidase KHS93_03270 PF00324 Amino acid permease KHS93_03275 PF17863 AAA lid domain KHS93_03275 PF07726 ATPase family associated with various cellular activities (AAA) KHS93_03280 PF01882 Protein of unknown function DUF58 KHS93_03285 PF13559 Domain of unknown function (DUF4129) KHS93_03285 PF01841 Transglutaminase-like superfamily KHS93_03285 PF11992 Domain of unknown function (DUF3488) KHS93_03290 PF00117 Glutamine amidotransferase class-I KHS93_03290 PF00958 GMP synthase C terminal domain KHS93_03290 PF02540 NAD synthase KHS93_03295 PF04542 Sigma-70 region 2 KHS93_03295 PF04545 Sigma-70, region 4 KHS93_03305 PF00860 Permease family KHS93_03315 PF13076 Fur-regulated basic protein A KHS93_03320 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHS93_03325 PF14044 NETI protein KHS93_03330 PF00731 AIR carboxylase KHS93_03335 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KHS93_03335 PF02222 ATP-grasp domain KHS93_03340 PF00206 Lyase KHS93_03340 PF10397 Adenylosuccinate lyase C-terminus KHS93_03345 PF01259 SAICAR synthetase KHS93_03350 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KHS93_03360 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KHS93_03360 PF00586 AIR synthase related protein, N-terminal domain KHS93_03360 PF02769 AIR synthase related protein, C-terminal domain KHS93_03365 PF00156 Phosphoribosyl transferase domain KHS93_03370 PF00586 AIR synthase related protein, N-terminal domain KHS93_03370 PF02769 AIR synthase related protein, C-terminal domain KHS93_03375 PF00551 Formyl transferase KHS93_03380 PF02142 MGS-like domain KHS93_03380 PF01808 AICARFT/IMPCHase bienzyme KHS93_03385 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KHS93_03385 PF02843 Phosphoribosylglycinamide synthetase, C domain KHS93_03385 PF02844 Phosphoribosylglycinamide synthetase, N domain KHS93_03390 PF11127 Protein of unknown function (DUF2892) KHS93_03395 PF13382 Adenine deaminase C-terminal domain KHS93_03395 PF01979 Amidohydrolase family KHS93_03400 PF11258 Protein of unknown function (DUF3048) N-terminal domain KHS93_03400 PF17479 Protein of unknown function (DUF3048) C-terminal domain KHS93_03405 PF01371 Trp repressor protein KHS93_03410 PF01645 Conserved region in glutamate synthase KHS93_03415 PF01884 PcrB family KHS93_03420 PF00580 UvrD/REP helicase N-terminal domain KHS93_03420 PF13361 UvrD-like helicase C-terminal domain KHS93_03425 PF00533 BRCA1 C Terminus (BRCT) domain KHS93_03425 PF03120 NAD-dependent DNA ligase OB-fold domain KHS93_03425 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KHS93_03425 PF12826 Helix-hairpin-helix motif KHS93_03425 PF01653 NAD-dependent DNA ligase adenylation domain KHS93_03430 PF07537 CamS sex pheromone cAM373 precursor KHS93_03435 PF01636 Phosphotransferase enzyme family KHS93_03440 PF02308 MgtC family KHS93_03445 PF00474 Sodium:solute symporter family KHS93_03450 PF02686 Glu-tRNAGln amidotransferase C subunit KHS93_03455 PF01425 Amidase KHS93_03460 PF02637 GatB domain KHS93_03460 PF02934 GatB/GatE catalytic domain KHS93_03465 PF00440 Bacterial regulatory proteins, tetR family KHS93_03470 PF00873 AcrB/AcrD/AcrF family KHS93_03475 PF00781 Diacylglycerol kinase catalytic domain KHS93_03480 PF05958 tRNA (Uracil-5-)-methyltransferase KHS93_03480 PF01938 TRAM domain KHS93_03490 PF00005 ABC transporter KHS93_03505 PF04634 Protein of unknown function, DUF600 KHS93_03510 PF04634 Protein of unknown function, DUF600 KHS93_03515 PF04740 LXG domain of WXG superfamily KHS93_03520 PF18593 CdiI immunity protein KHS93_03525 PF01709 Transcriptional regulator KHS93_03535 PF04439 Streptomycin adenylyltransferase KHS93_03540 PF11007 Spore coat associated protein JA (CotJA) KHS93_03545 PF12652 CotJB protein KHS93_03550 PF05067 Manganese containing catalase KHS93_03555 PF00583 Acetyltransferase (GNAT) family KHS93_03565 PF04239 Protein of unknown function (DUF421) KHS93_03570 PF03992 Antibiotic biosynthesis monooxygenase KHS93_03575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHS93_03580 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain KHS93_03580 PF01740 STAS domain KHS93_03585 PF10055 Uncharacterized small protein (DUF2292) KHS93_03590 PF01687 Riboflavin kinase KHS93_03595 PF01027 Inhibitor of apoptosis-promoting Bax1 KHS93_03605 PF01047 MarR family KHS93_03610 PF01494 FAD binding domain KHS93_03615 PF13037 Domain of unknown function (DUF3898) KHS93_03615 PF13039 Protein of unknown function (DUF3900) KHS93_03620 PF00258 Flavodoxin KHS93_03620 PF00175 Oxidoreductase NAD-binding domain KHS93_03620 PF00067 Cytochrome P450 KHS93_03620 PF00667 FAD binding domain KHS93_03635 PF00005 ABC transporter KHS93_03670 PF00881 Nitroreductase family KHS93_03680 PF13649 Methyltransferase domain KHS93_03685 PF00884 Sulfatase KHS93_03690 PF00483 Nucleotidyl transferase KHS93_03695 PF16363 GDP-mannose 4,6 dehydratase KHS93_03700 PF03407 Nucleotide-diphospho-sugar transferase KHS93_03705 PF00535 Glycosyl transferase family 2 KHS93_03710 PF03407 Nucleotide-diphospho-sugar transferase KHS93_03715 PF07690 Major Facilitator Superfamily KHS93_03720 PF13520 Amino acid permease KHS93_03725 PF00171 Aldehyde dehydrogenase family KHS93_03730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHS93_03740 PF00535 Glycosyl transferase family 2 KHS93_03740 PF13181 Tetratricopeptide repeat KHS93_03745 PF12848 ABC transporter KHS93_03745 PF00005 ABC transporter KHS93_03745 PF16326 ABC transporter C-terminal domain KHS93_03750 PF13411 MerR HTH family regulatory protein KHS93_03755 PF07690 Major Facilitator Superfamily KHS93_03760 PF00005 ABC transporter KHS93_03760 PF12848 ABC transporter KHS93_03765 PF00270 DEAD/DEAH box helicase KHS93_03765 PF00271 Helicase conserved C-terminal domain KHS93_03775 PF16884 N-terminal domain of oxidoreductase KHS93_03775 PF00107 Zinc-binding dehydrogenase KHS93_03780 PF11486 Protein of unknown function (DUF3212) KHS93_03785 PF11181 Heat induced stress protein YflT KHS93_03790 PF00544 Pectate lyase KHS93_03795 PF00939 Sodium:sulfate symporter transmembrane region KHS93_03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_03810 PF06580 Histidine kinase KHS93_03815 PF04397 LytTr DNA-binding domain KHS93_03815 PF00072 Response regulator receiver domain KHS93_03825 PF04203 Sortase domain KHS93_03830 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KHS93_03830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_03835 PF08279 HTH domain KHS93_03835 PF00072 Response regulator receiver domain KHS93_03835 PF12431 Transcriptional regulator KHS93_03840 PF03401 Tripartite tricarboxylate transporter family receptor KHS93_03845 PF03600 Citrate transporter KHS93_03850 PF00753 Metallo-beta-lactamase superfamily KHS93_03855 PF02898 Nitric oxide synthase, oxygenase domain KHS93_03860 PF00708 Acylphosphatase KHS93_03865 PF03473 MOSC domain KHS93_03865 PF03475 3-alpha domain KHS93_03870 PF11121 Protein of unknown function (DUF2639) KHS93_03880 PF11588 Protein of unknown function (DUF3243) KHS93_03885 PF00557 Metallopeptidase family M24 KHS93_03890 PF00367 phosphotransferase system, EIIB KHS93_03890 PF02378 Phosphotransferase system, EIIC KHS93_03895 PF10787 Uncharacterised protein from bacillus cereus group KHS93_03900 PF00884 Sulfatase KHS93_03905 PF09350 Domain of unknown function (DUF1992) KHS93_03910 PF00011 Hsp20/alpha crystallin family KHS93_03915 PF10676 Spore germination protein gerPA/gerPF KHS93_03920 PF10676 Spore germination protein gerPA/gerPF KHS93_03925 PF00367 phosphotransferase system, EIIB KHS93_03925 PF02378 Phosphotransferase system, EIIC KHS93_03930 PF00128 Alpha amylase, catalytic domain KHS93_03930 PF16657 Maltogenic Amylase, C-terminal domain KHS93_03935 PF00392 Bacterial regulatory proteins, gntR family KHS93_03935 PF07702 UTRA domain KHS93_03940 PF00881 Nitroreductase family KHS93_03955 PF02872 5'-nucleotidase, C-terminal domain KHS93_03955 PF00149 Calcineurin-like phosphoesterase KHS93_03960 PF01965 DJ-1/PfpI family KHS93_03965 PF00356 Bacterial regulatory proteins, lacI family KHS93_03970 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KHS93_03970 PF08501 Shikimate dehydrogenase substrate binding domain KHS93_03975 PF01487 Type I 3-dehydroquinase KHS93_03980 PF07690 Major Facilitator Superfamily KHS93_03985 PF06569 Protein of unknown function (DUF1128) KHS93_03990 PF01451 Low molecular weight phosphotyrosine protein phosphatase KHS93_04000 PF03631 Virulence factor BrkB KHS93_04005 PF07690 Major Facilitator Superfamily KHS93_04010 PF01699 Sodium/calcium exchanger protein KHS93_04015 PF14167 YfkD-like protein KHS93_04020 PF00924 Mechanosensitive ion channel KHS93_04025 PF04055 Radical SAM superfamily KHS93_04025 PF08756 YfkB-like domain KHS93_04035 PF01522 Polysaccharide deacetylase KHS93_04040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KHS93_04040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KHS93_04050 PF01544 CorA-like Mg2+ transporter protein KHS93_04055 PF00730 HhH-GPD superfamily base excision DNA repair protein KHS93_04060 PF05958 tRNA (Uracil-5-)-methyltransferase KHS93_04060 PF01938 TRAM domain KHS93_04065 PF14118 YfzA-like protein KHS93_04070 PF01207 Dihydrouridine synthase (Dus) KHS93_04080 PF00676 Dehydrogenase E1 component KHS93_04085 PF02779 Transketolase, pyrimidine binding domain KHS93_04085 PF02780 Transketolase, C-terminal domain KHS93_04090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KHS93_04090 PF00364 Biotin-requiring enzyme KHS93_04090 PF02817 e3 binding domain KHS93_04095 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHS93_04095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KHS93_04100 PF01590 GAF domain KHS93_04100 PF02954 Bacterial regulatory protein, Fis family KHS93_04100 PF00158 Sigma-54 interaction domain KHS93_04105 PF08141 Small acid-soluble spore protein H family KHS93_04110 PF02056 Family 4 glycosyl hydrolase KHS93_04110 PF11975 Family 4 glycosyl hydrolase C-terminal domain KHS93_04115 PF01380 SIS domain KHS93_04115 PF01418 Helix-turn-helix domain, rpiR family KHS93_04120 PF00367 phosphotransferase system, EIIB KHS93_04120 PF02378 Phosphotransferase system, EIIC KHS93_04125 PF00664 ABC transporter transmembrane region KHS93_04125 PF00005 ABC transporter KHS93_04130 PF00664 ABC transporter transmembrane region KHS93_04130 PF00005 ABC transporter KHS93_04135 PF07681 DoxX KHS93_04140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHS93_04150 PF03551 Transcriptional regulator PadR-like family KHS93_04150 PF10400 Virulence activator alpha C-term KHS93_04155 PF02525 Flavodoxin-like fold KHS93_04160 PF01757 Acyltransferase family KHS93_04165 PF00391 PEP-utilising enzyme, mobile domain KHS93_04165 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KHS93_04170 PF01337 Barstar (barnase inhibitor) KHS93_04175 PF12867 DinB superfamily KHS93_04180 PF07690 Major Facilitator Superfamily KHS93_04185 PF01047 MarR family KHS93_04190 PF03706 Lysylphosphatidylglycerol synthase TM region KHS93_04190 PF09924 Uncharacterised conserved protein (DUF2156) KHS93_04195 PF02567 Phenazine biosynthesis-like protein KHS93_04200 PF00881 Nitroreductase family KHS93_04205 PF14151 YfhD-like protein KHS93_04210 PF14152 YfhE-like protein KHS93_04215 PF08338 Domain of unknown function (DUF1731) KHS93_04215 PF01370 NAD dependent epimerase/dehydratase family KHS93_04220 PF02631 RecX family KHS93_04225 PF08838 Protein of unknown function (DUF1811) KHS93_04230 PF07690 Major Facilitator Superfamily KHS93_04235 PF10794 Protein of unknown function (DUF2606) KHS93_04240 PF00089 Trypsin KHS93_04245 PF08176 Small acid-soluble spore protein K family KHS93_04250 PF14043 WVELL protein KHS93_04255 PF08239 Bacterial SH3 domain KHS93_04260 PF13630 SdpI/YhfL protein family KHS93_04265 PF00561 alpha/beta hydrolase fold KHS93_04270 PF00535 Glycosyl transferase family 2 KHS93_04275 PF09586 Bacterial membrane protein YfhO KHS93_04280 PF04307 LexA-binding, inner membrane-associated putative hydrolase KHS93_04285 PF00730 HhH-GPD superfamily base excision DNA repair protein KHS93_04285 PF14815 NUDIX domain KHS93_04300 PF04259 Small, acid-soluble spore protein, gamma-type KHS93_04305 PF14182 YgaB-like protein KHS93_04310 PF04167 Protein of unknown function (DUF402) KHS93_04315 PF00005 ABC transporter KHS93_04315 PF00664 ABC transporter transmembrane region KHS93_04320 PF06081 Aromatic acid exporter family member 1 KHS93_04325 PF00202 Aminotransferase class-III KHS93_04330 PF00578 AhpC/TSA family KHS93_04335 PF01475 Ferric uptake regulator family KHS93_04340 PF11023 Zinc-ribbon containing domain KHS93_04345 PF14540 Nucleotidyltransferase-like KHS93_04345 PF18576 Helix-turn-helix domain KHS93_04450 PF03575 Peptidase family S51 KHS93_04455 PF13667 ThiC-associated domain KHS93_04455 PF01964 Radical SAM ThiC family KHS93_04460 PF08031 Berberine and berberine like KHS93_04460 PF01565 FAD binding domain KHS93_04465 PF13040 Fur-regulated basic protein B KHS93_04470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KHS93_04475 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_04480 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_04480 PF12911 N-terminal TM domain of oligopeptide transport permease C KHS93_04485 PF00005 ABC transporter KHS93_04485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHS93_04490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHS93_04490 PF00005 ABC transporter KHS93_04495 PF00199 Catalase KHS93_04495 PF06628 Catalase-related immune-responsive KHS93_04505 PF00005 ABC transporter KHS93_04510 PF09084 NMT1/THI5 like KHS93_04515 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_04520 PF00296 Luciferase-like monooxygenase KHS93_04525 PF00253 Ribosomal protein S14p/S29e KHS93_04535 PF01381 Helix-turn-helix KHS93_04550 PF08331 Domain of unknown function (DUF1730) KHS93_04555 PF12671 Putative amidase domain KHS93_04560 PF00588 SpoU rRNA Methylase family KHS93_04565 PF13171 Protein of unknown function (DUF4004) KHS93_04570 PF04519 Polymer-forming cytoskeletal KHS93_04580 PF06798 PrkA serine protein kinase C-terminal domain KHS93_04580 PF08298 PrkA AAA domain KHS93_04585 PF04285 Protein of unknown function (DUF444) KHS93_04590 PF01047 MarR family KHS93_04600 PF07690 Major Facilitator Superfamily KHS93_04605 PF03358 NADPH-dependent FMN reductase KHS93_04620 PF00392 Bacterial regulatory proteins, gntR family KHS93_04625 PF00005 ABC transporter KHS93_04630 PF00005 ABC transporter KHS93_04635 PF12679 ABC-2 family transporter protein KHS93_04640 PF00313 'Cold-shock' DNA-binding domain KHS93_04645 PF03180 NLPA lipoprotein KHS93_04650 PF07694 5TMR of 5TMR-LYT KHS93_04650 PF00990 Diguanylate cyclase, GGDEF domain KHS93_04655 PF00375 Sodium:dicarboxylate symporter family KHS93_04665 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KHS93_04675 PF07875 Coat F domain KHS93_04685 PF04203 Sortase domain KHS93_04690 PF00849 RNA pseudouridylate synthase KHS93_04690 PF01479 S4 domain KHS93_04695 PF17326 Family of unknown function (DUF5365) KHS93_04700 PF00571 CBS domain KHS93_04705 PF13419 Haloacid dehalogenase-like hydrolase KHS93_04710 PF00583 Acetyltransferase (GNAT) family KHS93_04710 PF00795 Carbon-nitrogen hydrolase KHS93_04715 PF00202 Aminotransferase class-III KHS93_04720 PF04309 Glycerol-3-phosphate responsive antiterminator KHS93_04725 PF00230 Major intrinsic protein KHS93_04730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KHS93_04730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KHS93_04735 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KHS93_04735 PF01266 FAD dependent oxidoreductase KHS93_04740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KHS93_04740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KHS93_04740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KHS93_04740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KHS93_04745 PF13185 GAF domain KHS93_04745 PF07730 Histidine kinase KHS93_04750 PF00196 Bacterial regulatory proteins, luxR family KHS93_04750 PF00072 Response regulator receiver domain KHS93_04755 PF03358 NADPH-dependent FMN reductase KHS93_04760 PF14148 YhdB-like protein KHS93_04765 PF13028 Protein of unknown function (DUF3889) KHS93_04770 PF00877 NlpC/P60 family KHS93_04770 PF01476 LysM domain KHS93_04775 PF02082 Transcriptional regulator KHS93_04780 PF05552 Conserved TM helix KHS93_04785 PF04293 SpoVR like protein KHS93_04790 PF00245 Alkaline phosphatase KHS93_04795 PF01476 LysM domain KHS93_04795 PF00877 NlpC/P60 family KHS93_04800 PF03466 LysR substrate binding domain KHS93_04800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_04805 PF00285 Citrate synthase, C-terminal domain KHS93_04815 PF13520 Amino acid permease KHS93_04820 PF00209 Sodium:neurotransmitter symporter family KHS93_04825 PF17453 Sigma-M inhibitor KHS93_04830 PF13791 Sigma factor regulator C-terminal KHS93_04830 PF13800 Sigma factor regulator N-terminal KHS93_04835 PF04542 Sigma-70 region 2 KHS93_04835 PF08281 Sigma-70, region 4 KHS93_04840 PF01553 Acyltransferase KHS93_04845 PF00571 CBS domain KHS93_04845 PF03471 Transporter associated domain KHS93_04845 PF01595 Cyclin M transmembrane N-terminal domain KHS93_04850 PF13411 MerR HTH family regulatory protein KHS93_04855 PF00155 Aminotransferase class I and II KHS93_04860 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_04860 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_04865 PF00571 CBS domain KHS93_04865 PF03471 Transporter associated domain KHS93_04865 PF01595 Cyclin M transmembrane N-terminal domain KHS93_04870 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KHS93_04875 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KHS93_04880 PF03009 Glycerophosphoryl diester phosphodiesterase family KHS93_04885 PF17444 Uncharacterized YhdX-like KHS93_04890 PF00924 Mechanosensitive ion channel KHS93_04895 PF02146 Sir2 family KHS93_04900 PF01522 Polysaccharide deacetylase KHS93_04905 PF01063 Amino-transferase class IV KHS93_04910 PF13977 BetI-type transcriptional repressor, C-terminal KHS93_04910 PF00440 Bacterial regulatory proteins, tetR family KHS93_04920 PF00582 Universal stress protein family KHS93_04925 PF00664 ABC transporter transmembrane region KHS93_04925 PF00005 ABC transporter KHS93_04930 PF00664 ABC transporter transmembrane region KHS93_04930 PF00005 ABC transporter KHS93_04935 PF13460 NAD(P)H-binding KHS93_04940 PF00269 Small, acid-soluble spore proteins, alpha/beta type KHS93_04945 PF17277 Family of unknown function (DUF5342) KHS93_04950 PF14398 YheC/D like ATP-grasp KHS93_04955 PF14398 YheC/D like ATP-grasp KHS93_04960 PF04286 Protein of unknown function (DUF445) KHS93_04965 PF06133 Control of competence regulator ComK, YlbF/YmcA KHS93_04970 PF08713 DNA alkylation repair enzyme KHS93_04980 PF04055 Radical SAM superfamily KHS93_04985 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KHS93_04990 PF00999 Sodium/hydrogen exchanger family KHS93_04995 PF02080 TrkA-C domain KHS93_05005 PF00378 Enoyl-CoA hydratase/isomerase KHS93_05010 PF14120 YhzD-like protein KHS93_05015 PF13732 Domain of unknown function (DUF4162) KHS93_05015 PF00005 ABC transporter KHS93_05025 PF00149 Calcineurin-like phosphoesterase KHS93_05030 PF13514 AAA domain KHS93_05035 PF01966 HD domain KHS93_05040 PF14147 Sporulation protein YhaL KHS93_05050 PF09680 Family of unknown function KHS93_05055 PF09680 Family of unknown function KHS93_05065 PF11667 Putative zincin peptidase KHS93_05070 PF08963 Protein of unknown function (DUF1878) KHS93_05075 PF01047 MarR family KHS93_05080 PF12732 YtxH-like protein KHS93_05090 PF17099 Tryptophan transporter TrpP KHS93_05095 PF00266 Aminotransferase class-V KHS93_05100 PF01230 HIT domain KHS93_05105 PF00005 ABC transporter KHS93_05110 PF05975 Bacterial ABC transporter protein EcsB KHS93_05115 PF12787 EcsC protein family KHS93_05120 PF07687 Peptidase dimerisation domain KHS93_05120 PF01546 Peptidase family M20/M25/M40 KHS93_05130 PF03992 Antibiotic biosynthesis monooxygenase KHS93_05135 PF00905 Penicillin binding protein transpeptidase domain KHS93_05135 PF00912 Transglycosylase KHS93_05140 PF01208 Uroporphyrinogen decarboxylase (URO-D) KHS93_05145 PF00762 Ferrochelatase KHS93_05150 PF01593 Flavin containing amine oxidoreductase KHS93_05155 PF17932 Tetracyclin repressor-like, C-terminal domain KHS93_05155 PF00440 Bacterial regulatory proteins, tetR family KHS93_05165 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KHS93_05165 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KHS93_05175 PF05343 M42 glutamyl aminopeptidase KHS93_05180 PF00375 Sodium:dicarboxylate symporter family KHS93_05185 PF14149 YhfH-like protein KHS93_05190 PF12706 Beta-lactamase superfamily domain KHS93_05195 PF03099 Biotin/lipoate A/B protein ligase family KHS93_05195 PF10437 Bacterial lipoate protein ligase C-terminus KHS93_05200 PF13460 NAD(P)H-binding KHS93_05205 PF00501 AMP-binding enzyme KHS93_05205 PF13193 AMP-binding enzyme C-terminal domain KHS93_05215 PF01435 Peptidase family M48 KHS93_05215 PF16491 CAAX prenyl protease N-terminal, five membrane helices KHS93_05220 PF05922 Peptidase inhibitor I9 KHS93_05220 PF00082 Subtilase family KHS93_05225 PF01497 Periplasmic binding protein KHS93_05230 PF00300 Histidine phosphatase superfamily (branch 1) KHS93_05235 PF02803 Thiolase, C-terminal domain KHS93_05235 PF00108 Thiolase, N-terminal domain KHS93_05240 PF00501 AMP-binding enzyme KHS93_05240 PF13193 AMP-binding enzyme C-terminal domain KHS93_05245 PF02632 BioY family KHS93_05250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHS93_05255 PF01266 FAD dependent oxidoreductase KHS93_05255 PF00355 Rieske [2Fe-2S] domain KHS93_05265 PF08858 IDEAL domain KHS93_05270 PF06338 ComK protein KHS93_05280 PF08818 Domain of unknown function (DU1801) KHS93_05285 PF15493 Domain of unknown function, YrpD KHS93_05290 PF05901 Excalibur calcium-binding domain KHS93_05295 PF01906 Putative heavy-metal-binding KHS93_05300 PF00474 Sodium:solute symporter family KHS93_05305 PF11755 Protein of unknown function (DUF3311) KHS93_05315 PF09335 SNARE associated Golgi protein KHS93_05320 PF10502 Signal peptidase, peptidase S26 KHS93_05325 PF01494 FAD binding domain KHS93_05330 PF01047 MarR family KHS93_05335 PF05145 Transition state regulatory protein AbrB KHS93_05340 PF07690 Major Facilitator Superfamily KHS93_05345 PF08361 MAATS-type transcriptional repressor, C-terminal region KHS93_05345 PF00440 Bacterial regulatory proteins, tetR family KHS93_05350 PF02915 Rubrerythrin KHS93_05355 PF04239 Protein of unknown function (DUF421) KHS93_05360 PF12705 PD-(D/E)XK nuclease superfamily KHS93_05360 PF13361 UvrD-like helicase C-terminal domain KHS93_05365 PF13361 UvrD-like helicase C-terminal domain KHS93_05365 PF00580 UvrD/REP helicase N-terminal domain KHS93_05365 PF12705 PD-(D/E)XK nuclease superfamily KHS93_05370 PF00149 Calcineurin-like phosphoesterase KHS93_05370 PF12320 Type 5 capsule protein repressor C-terminal domain KHS93_05375 PF13476 AAA domain KHS93_05385 PF10676 Spore germination protein gerPA/gerPF KHS93_05390 PF10970 Spore germination protein GerPE KHS93_05400 PF10737 Spore germination protein GerPC KHS93_05405 PF10803 Spore germination GerPB KHS93_05410 PF10676 Spore germination protein gerPA/gerPF KHS93_05415 PF09388 Spo0E like sporulation regulatory protein KHS93_05420 PF01557 Fumarylacetoacetate (FAA) hydrolase family KHS93_05425 PF07457 Protein of unknown function (DUF1516) KHS93_05435 PF10949 Protein of unknown function (DUF2777) KHS93_05440 PF00733 Asparagine synthase KHS93_05440 PF13537 Glutamine amidotransferase domain KHS93_05450 PF01554 MatE KHS93_05455 PF02311 AraC-like ligand binding domain KHS93_05455 PF12833 Helix-turn-helix domain KHS93_05460 PF00356 Bacterial regulatory proteins, lacI family KHS93_05465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KHS93_05465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KHS93_05470 PF05163 DinB family KHS93_05475 PF13599 Pentapeptide repeats (9 copies) KHS93_05480 PF13673 Acetyltransferase (GNAT) domain KHS93_05485 PF02219 Methylenetetrahydrofolate reductase KHS93_05485 PF02574 Homocysteine S-methyltransferase KHS93_05490 PF04461 Protein of unknown function (DUF520) KHS93_05495 PF17783 CvfB-like winged helix domain KHS93_05495 PF13509 S1 domain KHS93_05500 PF02608 ABC transporter substrate-binding protein PnrA-like KHS93_05505 PF12729 Four helix bundle sensory module for signal transduction KHS93_05505 PF00672 HAMP domain KHS93_05505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHS93_05515 PF02645 Uncharacterised protein, DegV family COG1307 KHS93_05520 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHS93_05520 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHS93_05525 PF12690 Intracellular proteinase inhibitor KHS93_05530 PF12758 Protein of unknown function (DUF3813) KHS93_05545 PF00326 Prolyl oligopeptidase family KHS93_05550 PF01883 Iron-sulfur cluster assembly protein KHS93_05555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHS93_05560 PF01565 FAD binding domain KHS93_05565 PF07690 Major Facilitator Superfamily KHS93_05570 PF02774 Semialdehyde dehydrogenase, dimerisation domain KHS93_05570 PF01118 Semialdehyde dehydrogenase, NAD binding domain KHS93_05575 PF01960 ArgJ family KHS93_05580 PF00696 Amino acid kinase family KHS93_05585 PF00202 Aminotransferase class-III KHS93_05590 PF00117 Glutamine amidotransferase class-I KHS93_05590 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KHS93_05595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KHS93_05595 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KHS93_05600 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KHS93_05600 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KHS93_05605 PF14168 YjzC-like protein KHS93_05610 PF11151 Protein of unknown function (DUF2929) KHS93_05625 PF02608 ABC transporter substrate-binding protein PnrA-like KHS93_05630 PF10815 ComZ KHS93_05640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KHS93_05640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KHS93_05645 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_05645 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_05650 PF10026 Predicted Zn-dependent protease (DUF2268) KHS93_05655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHS93_05655 PF00005 ABC transporter KHS93_05660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHS93_05660 PF00005 ABC transporter KHS93_05665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KHS93_05670 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_05675 PF12911 N-terminal TM domain of oligopeptide transport permease C KHS93_05675 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_05690 PF12227 Protein of unknown function (DUF3603) KHS93_05695 PF00579 tRNA synthetases class I (W and Y) KHS93_05700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KHS93_05705 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_05710 PF12911 N-terminal TM domain of oligopeptide transport permease C KHS93_05710 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_05715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHS93_05715 PF00005 ABC transporter KHS93_05720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHS93_05720 PF00005 ABC transporter KHS93_05730 PF13508 Acetyltransferase (GNAT) domain KHS93_05735 PF03960 ArsC family KHS93_05740 PF03741 Integral membrane protein TerC family KHS93_05750 PF05389 Negative regulator of genetic competence (MecA) KHS93_05755 PF06054 Competence protein CoiA-like family KHS93_05760 PF01432 Peptidase family M3 KHS93_05760 PF08439 Oligopeptidase F KHS93_05775 PF01152 Bacterial-like globin KHS93_05780 PF01464 Transglycosylase SLT domain KHS93_05785 PF01928 CYTH domain KHS93_05795 PF04607 Region found in RelA / SpoT proteins KHS93_05800 PF01513 ATP-NAD kinase KHS93_05805 PF00849 RNA pseudouridylate synthase KHS93_05810 PF00149 Calcineurin-like phosphoesterase KHS93_05815 PF00999 Sodium/hydrogen exchanger family KHS93_05815 PF02080 TrkA-C domain KHS93_05815 PF02254 TrkA-N domain KHS93_05820 PF03070 TENA/THI-4/PQQC family KHS93_05825 PF02581 Thiamine monophosphate synthase KHS93_05830 PF01266 FAD dependent oxidoreductase KHS93_05835 PF02597 ThiS family KHS93_05840 PF05690 Thiazole biosynthesis protein ThiG KHS93_05845 PF00899 ThiF family KHS93_05850 PF08543 Phosphomethylpyrimidine kinase KHS93_05860 PF14153 Spore coat protein CotO KHS93_05865 PF10612 Spore coat protein Z KHS93_05870 PF10612 Spore coat protein Z KHS93_05875 PF07552 Spore Coat Protein X and V domain KHS93_05885 PF07552 Spore Coat Protein X and V domain KHS93_05890 PF07098 Protein of unknown function (DUF1360) KHS93_05905 PF14069 Stage VI sporulation protein F KHS93_05910 PF00580 UvrD/REP helicase N-terminal domain KHS93_05910 PF13361 UvrD-like helicase C-terminal domain KHS93_05920 PF00753 Metallo-beta-lactamase superfamily KHS93_05930 PF00005 ABC transporter KHS93_05940 PF13673 Acetyltransferase (GNAT) domain KHS93_05950 PF00756 Putative esterase KHS93_05955 PF01053 Cys/Met metabolism PLP-dependent enzyme KHS93_05960 PF01053 Cys/Met metabolism PLP-dependent enzyme KHS93_05975 PF04740 LXG domain of WXG superfamily KHS93_05975 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH KHS93_05985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHS93_05995 PF03992 Antibiotic biosynthesis monooxygenase KHS93_06000 PF07690 Major Facilitator Superfamily KHS93_06005 PF01047 MarR family KHS93_06010 PF07745 Glycosyl hydrolase family 53 KHS93_06015 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KHS93_06015 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KHS93_06020 PF16363 GDP-mannose 4,6 dehydratase KHS93_06025 PF10509 Galactokinase galactose-binding signature KHS93_06025 PF08544 GHMP kinases C terminal KHS93_06025 PF00288 GHMP kinases N terminal domain KHS93_06030 PF02378 Phosphotransferase system, EIIC KHS93_06030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KHS93_06035 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KHS93_06040 PF00232 Glycosyl hydrolase family 1 KHS93_06045 PF00455 DeoR C terminal sensor domain KHS93_06045 PF08220 DeoR-like helix-turn-helix domain KHS93_06060 PF02308 MgtC family KHS93_06065 PF14070 Putative motility protein KHS93_06070 PF10990 Protein of unknown function (DUF2809) KHS93_06075 PF14172 Domain of unknown function (DUF4309) KHS93_06080 PF12838 4Fe-4S dicluster domain KHS93_06080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KHS93_06080 PF00384 Molybdopterin oxidoreductase KHS93_06080 PF01568 Molydopterin dinucleotide binding domain KHS93_06080 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KHS93_06085 PF07849 Protein of unknown function (DUF1641) KHS93_06090 PF00067 Cytochrome P450 KHS93_06095 PF04101 Glycosyltransferase family 28 C-terminal domain KHS93_06105 PF02602 Uroporphyrinogen-III synthase HemD KHS93_06110 PF03649 Uncharacterised protein family (UPF0014) KHS93_06115 PF00005 ABC transporter KHS93_06120 PF13536 Putative multidrug resistance efflux transporter KHS93_06130 PF07849 Protein of unknown function (DUF1641) KHS93_06135 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHS93_06140 PF02614 Glucuronate isomerase KHS93_06150 PF00356 Bacterial regulatory proteins, lacI family KHS93_06155 PF08125 Mannitol dehydrogenase C-terminal domain KHS93_06155 PF01232 Mannitol dehydrogenase Rossmann domain KHS93_06160 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus KHS93_06160 PF08666 SAF domain KHS93_06165 PF00072 Response regulator receiver domain KHS93_06165 PF00486 Transcriptional regulatory protein, C terminal KHS93_06170 PF00672 HAMP domain KHS93_06170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_06170 PF00512 His Kinase A (phospho-acceptor) domain KHS93_06185 PF01925 Sulfite exporter TauE/SafE KHS93_06190 PF05163 DinB family KHS93_06195 PF18801 response regulator aspartate phosphatase H, N terminal KHS93_06205 PF01471 Putative peptidoglycan binding domain KHS93_06205 PF01476 LysM domain KHS93_06205 PF01510 N-acetylmuramoyl-L-alanine amidase KHS93_06210 PF08000 Bacterial PH domain KHS93_06215 PF05908 Poly-gamma-glutamate hydrolase KHS93_06220 PF06114 IrrE N-terminal-like domain KHS93_06225 PF01381 Helix-turn-helix KHS93_06240 PF01695 IstB-like ATP binding protein KHS93_06255 PF17356 Phage-like element PBSX protein XtrA KHS93_06260 PF08281 Sigma-70, region 4 KHS93_06265 PF10668 Phage terminase small subunit KHS93_06265 PF03592 Terminase small subunit KHS93_06270 PF04466 Phage terminase large subunit KHS93_06270 PF17288 Terminase RNAseH like domain KHS93_06275 PF04860 Phage portal protein KHS93_06280 PF14550 Putative phage serine protease XkdF KHS93_06285 PF05065 Phage capsid family KHS93_06290 PF11436 Protein of unknown function (DUF3199) KHS93_06295 PF12206 Domain of unknown function (DUF3599) KHS93_06300 PF04883 Bacteriophage HK97-gp10, putative tail-component KHS93_06315 PF04984 Phage tail sheath protein subtilisin-like domain KHS93_06315 PF17481 Phage tail sheath protein beta-sandwich domain KHS93_06315 PF17482 Phage tail sheath C-terminal domain KHS93_06320 PF09393 Phage tail tube protein KHS93_06325 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC KHS93_06335 PF01464 Transglycosylase SLT domain KHS93_06335 PF01464 Transglycosylase SLT domain KHS93_06335 PF01464 Transglycosylase SLT domain KHS93_06340 PF01476 LysM domain KHS93_06350 PF10844 Protein of unknown function (DUF2577) KHS93_06355 PF10934 Protein of unknown function (DUF2634) KHS93_06360 PF04865 Baseplate J-like protein KHS93_06365 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) KHS93_06385 PF09693 Phage uncharacterised protein (Phage_XkdX) KHS93_06395 PF10779 Haemolysin XhlA KHS93_06400 PF04688 SPP1 phage holin KHS93_06405 PF01476 LysM domain KHS93_06405 PF01471 Putative peptidoglycan binding domain KHS93_06405 PF01510 N-acetylmuramoyl-L-alanine amidase KHS93_06410 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system KHS93_06415 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KHS93_06420 PF01384 Phosphate transporter family KHS93_06425 PF01865 Protein of unknown function DUF47 KHS93_06430 PF13520 Amino acid permease KHS93_06435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHS93_06440 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase KHS93_06445 PF00535 Glycosyl transferase family 2 KHS93_06455 PF13180 PDZ domain KHS93_06460 PF07690 Major Facilitator Superfamily KHS93_06465 PF04951 D-aminopeptidase KHS93_06470 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_06475 PF12911 N-terminal TM domain of oligopeptide transport permease C KHS93_06475 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_06480 PF00005 ABC transporter KHS93_06480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHS93_06485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KHS93_06490 PF02016 LD-carboxypeptidase N-terminal domain KHS93_06490 PF17676 LD-carboxypeptidase C-terminal domain KHS93_06495 PF13378 Enolase C-terminal domain-like KHS93_06495 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KHS93_06500 PF00877 NlpC/P60 family KHS93_06505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KHS93_06505 PF00005 ABC transporter KHS93_06510 PF10282 Lactonase, 7-bladed beta-propeller KHS93_06520 PF03061 Thioesterase superfamily KHS93_06525 PF13302 Acetyltransferase (GNAT) domain KHS93_06530 PF00893 Small Multidrug Resistance protein KHS93_06535 PF00893 Small Multidrug Resistance protein KHS93_06540 PF00551 Formyl transferase KHS93_06540 PF01842 ACT domain KHS93_06545 PF01472 PUA domain KHS93_06545 PF00696 Amino acid kinase family KHS93_06550 PF00171 Aldehyde dehydrogenase family KHS93_06555 PF02566 OsmC-like protein KHS93_06560 PF01047 MarR family KHS93_06565 PF02566 OsmC-like protein KHS93_06580 PF13181 Tetratricopeptide repeat KHS93_06580 PF00535 Glycosyl transferase family 2 KHS93_06590 PF12832 MFS_1 like family KHS93_06595 PF00027 Cyclic nucleotide-binding domain KHS93_06600 PF01717 Cobalamin-independent synthase, Catalytic domain KHS93_06600 PF08267 Cobalamin-independent synthase, N-terminal domain KHS93_06605 PF00082 Subtilase family KHS93_06610 PF01740 STAS domain KHS93_06615 PF02361 Cobalt transport protein KHS93_06620 PF00005 ABC transporter KHS93_06625 PF09819 ABC-type cobalt transport system, permease component KHS93_06630 PF01476 LysM domain KHS93_06630 PF00704 Glycosyl hydrolases family 18 KHS93_06635 PF11132 Transcriptional regulator protein (SplA) KHS93_06640 PF00571 CBS domain KHS93_06640 PF03448 MgtE intracellular N domain KHS93_06640 PF01769 Divalent cation transporter KHS93_06645 PF13411 MerR HTH family regulatory protein KHS93_06660 PF01047 MarR family KHS93_06670 PF01068 ATP dependent DNA ligase domain KHS93_06675 PF02735 Ku70/Ku80 beta-barrel domain KHS93_06680 PF09335 SNARE associated Golgi protein KHS93_06685 PF03741 Integral membrane protein TerC family KHS93_06690 PF04542 Sigma-70 region 2 KHS93_06695 PF12791 Anti-sigma factor N-terminus KHS93_06700 PF00269 Small, acid-soluble spore proteins, alpha/beta type KHS93_06705 PF08876 Domain of unknown function (DUF1836) KHS93_06710 PF01435 Peptidase family M48 KHS93_06715 PF02386 Cation transport protein KHS93_06720 PF04239 Protein of unknown function (DUF421) KHS93_06730 PF01757 Acyltransferase family KHS93_06735 PF00512 His Kinase A (phospho-acceptor) domain KHS93_06735 PF00989 PAS fold KHS93_06735 PF13188 PAS domain KHS93_06735 PF13426 PAS domain KHS93_06735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_06740 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KHS93_06740 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KHS93_06745 PF01008 Initiation factor 2 subunit family KHS93_06750 PF01636 Phosphotransferase enzyme family KHS93_06755 PF00795 Carbon-nitrogen hydrolase KHS93_06760 PF00155 Aminotransferase class I and II KHS93_06765 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KHS93_06765 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KHS93_06775 PF00596 Class II Aldolase and Adducin N-terminal domain KHS93_06780 PF03079 ARD/ARD' family KHS93_06785 PF09388 Spo0E like sporulation regulatory protein KHS93_06790 PF02743 Cache domain KHS93_06790 PF00512 His Kinase A (phospho-acceptor) domain KHS93_06790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_06795 PF01047 MarR family KHS93_06800 PF13677 Membrane MotB of proton-channel complex MotA/MotB KHS93_06800 PF00691 OmpA family KHS93_06805 PF01618 MotA/TolQ/ExbB proton channel family KHS93_06810 PF10431 C-terminal, D2-small domain, of ClpB protein KHS93_06810 PF17871 AAA lid domain KHS93_06810 PF07724 AAA domain (Cdc48 subfamily) KHS93_06810 PF00004 ATPase family associated with various cellular activities (AAA) KHS93_06825 PF06508 Queuosine biosynthesis protein QueC KHS93_06830 PF01242 6-pyruvoyl tetrahydropterin synthase KHS93_06835 PF04055 Radical SAM superfamily KHS93_06840 PF14489 QueF-like protein KHS93_06845 PF01638 HxlR-like helix-turn-helix KHS93_06860 PF00270 DEAD/DEAH box helicase KHS93_06860 PF13749 Putative ATP-dependent DNA helicase recG C-terminal KHS93_06860 PF17191 RecG wedge domain KHS93_06865 PF11514 Protein of unknown function (DUF3219) KHS93_06870 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KHS93_06880 PF07486 Cell Wall Hydrolase KHS93_06885 PF01943 Polysaccharide biosynthesis protein KHS93_06890 PF00578 AhpC/TSA family KHS93_06900 PF01321 Creatinase/Prolidase N-terminal domain KHS93_06900 PF00557 Metallopeptidase family M24 KHS93_06905 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KHS93_06905 PF00356 Bacterial regulatory proteins, lacI family KHS93_06910 PF03123 CAT RNA binding domain KHS93_06910 PF00874 PRD domain KHS93_06915 PF02378 Phosphotransferase system, EIIC KHS93_06915 PF00367 phosphotransferase system, EIIB KHS93_06915 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KHS93_06920 PF00381 PTS HPr component phosphorylation site KHS93_06925 PF05524 PEP-utilising enzyme, N-terminal KHS93_06925 PF00391 PEP-utilising enzyme, mobile domain KHS93_06925 PF02896 PEP-utilising enzyme, TIM barrel domain KHS93_06930 PF11132 Transcriptional regulator protein (SplA) KHS93_06940 PF02743 Cache domain KHS93_06940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHS93_06940 PF00672 HAMP domain KHS93_06945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KHS93_06945 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KHS93_06950 PF00188 Cysteine-rich secretory protein family KHS93_06955 PF00905 Penicillin binding protein transpeptidase domain KHS93_06955 PF03717 Penicillin-binding Protein dimerisation domain KHS93_06960 PF00512 His Kinase A (phospho-acceptor) domain KHS93_06960 PF00989 PAS fold KHS93_06960 PF08447 PAS fold KHS93_06960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_06965 PF00155 Aminotransferase class I and II KHS93_06975 PF01584 CheW-like domain KHS93_06975 PF00072 Response regulator receiver domain KHS93_06980 PF14177 YkyB-like protein KHS93_06985 PF07690 Major Facilitator Superfamily KHS93_06990 PF01476 LysM domain KHS93_06990 PF03734 L,D-transpeptidase catalytic domain KHS93_06995 PF10518 TAT (twin-arginine translocation) pathway signal sequence KHS93_06995 PF00149 Calcineurin-like phosphoesterase KHS93_07015 PF10388 EAL-domain associated signalling protein domain KHS93_07015 PF00563 EAL domain KHS93_07020 PF08796 Protein of unknown function (DUF1797) KHS93_07025 PF04308 Ribonuclease H-like KHS93_07030 PF14156 Antirepressor AbbA KHS93_07040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_07040 PF03466 LysR substrate binding domain KHS93_07045 PF00258 Flavodoxin KHS93_07055 PF00258 Flavodoxin KHS93_07060 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KHS93_07060 PF14602 Hexapeptide repeat of succinyl-transferase KHS93_07060 PF00132 Bacterial transferase hexapeptide (six repeats) KHS93_07065 PF01546 Peptidase family M20/M25/M40 KHS93_07065 PF07687 Peptidase dimerisation domain KHS93_07070 PF03698 Uncharacterised protein family (UPF0180) KHS93_07075 PF00924 Mechanosensitive ion channel KHS93_07080 PF00578 AhpC/TSA family KHS93_07095 PF12804 MobA-like NTP transferase domain KHS93_07100 PF00899 ThiF family KHS93_07105 PF03454 MoeA C-terminal region (domain IV) KHS93_07105 PF00994 Probable molybdopterin binding domain KHS93_07105 PF03453 MoeA N-terminal region (domain I and II) KHS93_07110 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KHS93_07115 PF02391 MoaE protein KHS93_07120 PF02597 ThiS family KHS93_07125 PF04893 Yip1 domain KHS93_07130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KHS93_07135 PF00005 ABC transporter KHS93_07140 PF12704 MacB-like periplasmic core domain KHS93_07140 PF02687 FtsX-like permease family KHS93_07145 PF08220 DeoR-like helix-turn-helix domain KHS93_07145 PF00455 DeoR C terminal sensor domain KHS93_07150 PF00294 pfkB family carbohydrate kinase KHS93_07155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KHS93_07155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KHS93_07160 PF10502 Signal peptidase, peptidase S26 KHS93_07170 PF12848 ABC transporter KHS93_07170 PF00005 ABC transporter KHS93_07175 PF08546 Ketopantoate reductase PanE/ApbA C terminal KHS93_07175 PF02558 Ketopantoate reductase PanE/ApbA KHS93_07180 PF02073 Thermophilic metalloprotease (M29) KHS93_07185 PF17447 Uncharacterized YkpC-like KHS93_07195 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KHS93_07195 PF18277 AbrB C-terminal domain KHS93_07200 PF00989 PAS fold KHS93_07200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_07200 PF00512 His Kinase A (phospho-acceptor) domain KHS93_07205 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KHS93_07210 PF02080 TrkA-C domain KHS93_07210 PF02254 TrkA-N domain KHS93_07215 PF13382 Adenine deaminase C-terminal domain KHS93_07215 PF01979 Amidohydrolase family KHS93_07220 PF00753 Metallo-beta-lactamase superfamily KHS93_07220 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KHS93_07220 PF17770 Ribonuclease J C-terminal domain KHS93_07225 PF07288 Protein of unknown function (DUF1447) KHS93_07235 PF01327 Polypeptide deformylase KHS93_07245 PF10368 Putative cell-wall binding lipoprotein KHS93_07250 PF00698 Acyl transferase domain KHS93_07255 PF00501 AMP-binding enzyme KHS93_07255 PF00668 Condensation domain KHS93_07255 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_07255 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_07255 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_07255 PF08659 KR domain KHS93_07255 PF00550 Phosphopantetheine attachment site KHS93_07255 PF14765 Polyketide synthase dehydratase KHS93_07255 PF13193 AMP-binding enzyme C-terminal domain KHS93_07260 PF14765 Polyketide synthase dehydratase KHS93_07260 PF00550 Phosphopantetheine attachment site KHS93_07260 PF08659 KR domain KHS93_07260 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_07260 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_07260 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_07265 PF08659 KR domain KHS93_07265 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_07265 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_07265 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_07265 PF00668 Condensation domain KHS93_07265 PF13193 AMP-binding enzyme C-terminal domain KHS93_07265 PF00501 AMP-binding enzyme KHS93_07265 PF00550 Phosphopantetheine attachment site KHS93_07265 PF14765 Polyketide synthase dehydratase KHS93_07270 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_07270 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_07270 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_07270 PF08659 KR domain KHS93_07270 PF00550 Phosphopantetheine attachment site KHS93_07270 PF14765 Polyketide synthase dehydratase KHS93_07275 PF14765 Polyketide synthase dehydratase KHS93_07275 PF00550 Phosphopantetheine attachment site KHS93_07275 PF08659 KR domain KHS93_07275 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_07275 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_07275 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_07280 PF08659 KR domain KHS93_07280 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_07280 PF14765 Polyketide synthase dehydratase KHS93_07280 PF00550 Phosphopantetheine attachment site KHS93_07280 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_07280 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_07285 PF14765 Polyketide synthase dehydratase KHS93_07285 PF00550 Phosphopantetheine attachment site KHS93_07285 PF08659 KR domain KHS93_07285 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_07285 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_07285 PF00668 Condensation domain KHS93_07285 PF13193 AMP-binding enzyme C-terminal domain KHS93_07285 PF00501 AMP-binding enzyme KHS93_07285 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_07290 PF11954 Domain of unknown function (DUF3471) KHS93_07290 PF00144 Beta-lactamase KHS93_07295 PF00676 Dehydrogenase E1 component KHS93_07300 PF02779 Transketolase, pyrimidine binding domain KHS93_07300 PF02780 Transketolase, C-terminal domain KHS93_07305 PF02817 e3 binding domain KHS93_07305 PF00364 Biotin-requiring enzyme KHS93_07305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KHS93_07310 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHS93_07310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KHS93_07325 PF13790 SR1 protein KHS93_07330 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KHS93_07330 PF01276 Orn/Lys/Arg decarboxylase, major domain KHS93_07335 PF05256 Uncharacterised protein family (UPF0223) KHS93_07340 PF06335 Protein of unknown function (DUF1054) KHS93_07350 PF00459 Inositol monophosphatase family KHS93_07355 PF00583 Acetyltransferase (GNAT) family KHS93_07360 PF07504 Fungalysin/Thermolysin Propeptide Motif KHS93_07360 PF03413 Peptidase propeptide and YPEB domain KHS93_07360 PF01447 Thermolysin metallopeptidase, catalytic domain KHS93_07360 PF02868 Thermolysin metallopeptidase, alpha-helical domain KHS93_07375 PF04542 Sigma-70 region 2 KHS93_07375 PF08281 Sigma-70, region 4 KHS93_07380 PF13490 Putative zinc-finger KHS93_07390 PF17259 Family of unknown function (DUF5325) KHS93_07395 PF00679 Elongation factor G C-terminus KHS93_07395 PF03144 Elongation factor Tu domain 2 KHS93_07395 PF00009 Elongation factor Tu GTP binding domain KHS93_07395 PF14492 Elongation Factor G, domain II KHS93_07400 PF14036 YlaH-like protein KHS93_07405 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KHS93_07410 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KHS93_07415 PF13638 PIN domain KHS93_07415 PF02562 PhoH-like protein KHS93_07425 PF04960 Glutaminase KHS93_07430 PF07408 Protein of unknown function (DUF1507) KHS93_07435 PF01098 Cell cycle protein KHS93_07440 PF00289 Biotin carboxylase, N-terminal domain KHS93_07440 PF00682 HMGL-like KHS93_07440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KHS93_07440 PF02436 Conserved carboxylase domain KHS93_07440 PF00364 Biotin-requiring enzyme KHS93_07440 PF02785 Biotin carboxylase C-terminal domain KHS93_07445 PF02628 Cytochrome oxidase assembly protein KHS93_07450 PF01040 UbiA prenyltransferase family KHS93_07455 PF00034 Cytochrome c KHS93_07455 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KHS93_07455 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KHS93_07460 PF00115 Cytochrome C and Quinol oxidase polypeptide I KHS93_07465 PF00510 Cytochrome c oxidase subunit III KHS93_07470 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KHS93_07475 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KHS93_07480 PF08868 YugN-like family KHS93_07485 PF00571 CBS domain KHS93_07490 PF14504 CAP-associated N-terminal KHS93_07490 PF00188 Cysteine-rich secretory protein family KHS93_07495 PF14071 Putative coat protein KHS93_07500 PF14003 YlbE-like protein KHS93_07505 PF06133 Control of competence regulator ComK, YlbF/YmcA KHS93_07510 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KHS93_07525 PF01467 Cytidylyltransferase-like KHS93_07530 PF07670 Nucleoside recognition KHS93_07535 PF01734 Patatin-like phospholipase KHS93_07540 PF05362 Lon protease (S16) C-terminal proteolytic domain KHS93_07540 PF13180 PDZ domain KHS93_07545 PF05636 HIGH Nucleotidyl Transferase KHS93_07550 PF02620 Large ribosomal RNA subunit accumulation protein YceD KHS93_07555 PF01783 Ribosomal L32p protein family KHS93_07565 PF00583 Acetyltransferase (GNAT) family KHS93_07570 PF08546 Ketopantoate reductase PanE/ApbA C terminal KHS93_07570 PF02558 Ketopantoate reductase PanE/ApbA KHS93_07575 PF10079 Bacillithiol biosynthesis BshC KHS93_07580 PF02381 MraZ protein, putative antitoxin-like KHS93_07585 PF01795 MraW methylase family KHS93_07595 PF00905 Penicillin binding protein transpeptidase domain KHS93_07595 PF03717 Penicillin-binding Protein dimerisation domain KHS93_07595 PF03793 PASTA domain KHS93_07600 PF00905 Penicillin binding protein transpeptidase domain KHS93_07600 PF03793 PASTA domain KHS93_07600 PF03717 Penicillin-binding Protein dimerisation domain KHS93_07605 PF08245 Mur ligase middle domain KHS93_07605 PF02875 Mur ligase family, glutamate ligase domain KHS93_07605 PF01225 Mur ligase family, catalytic domain KHS93_07610 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KHS93_07610 PF00953 Glycosyl transferase family 4 KHS93_07615 PF08245 Mur ligase middle domain KHS93_07615 PF02875 Mur ligase family, glutamate ligase domain KHS93_07620 PF01098 Cell cycle protein KHS93_07625 PF04101 Glycosyltransferase family 28 C-terminal domain KHS93_07625 PF03033 Glycosyltransferase family 28 N-terminal domain KHS93_07630 PF01565 FAD binding domain KHS93_07630 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KHS93_07635 PF08478 POTRA domain, FtsQ-type KHS93_07640 PF02491 SHS2 domain inserted in FTSA KHS93_07645 PF12327 FtsZ family, C-terminal domain KHS93_07645 PF00091 Tubulin/FtsZ family, GTPase domain KHS93_07650 PF05922 Peptidase inhibitor I9 KHS93_07650 PF00082 Subtilase family KHS93_07655 PF03419 Sporulation factor SpoIIGA KHS93_07660 PF04542 Sigma-70 region 2 KHS93_07660 PF04545 Sigma-70, region 4 KHS93_07665 PF04545 Sigma-70, region 4 KHS93_07665 PF04539 Sigma-70 region 3 KHS93_07665 PF04542 Sigma-70 region 2 KHS93_07670 PF00005 ABC transporter KHS93_07675 PF07687 Peptidase dimerisation domain KHS93_07675 PF01546 Peptidase family M20/M25/M40 KHS93_07680 PF05239 PRC-barrel domain KHS93_07685 PF02578 Multi-copper polyphenol oxidoreductase laccase KHS93_07690 PF01168 Alanine racemase, N-terminal domain KHS93_07695 PF04472 Cell division protein SepF KHS93_07700 PF02325 YGGT family KHS93_07705 PF17774 Putative RNA-binding domain in YlmH KHS93_07705 PF01479 S4 domain KHS93_07710 PF05103 DivIVA protein KHS93_07715 PF00133 tRNA synthetases class I (I, L, M and V) KHS93_07715 PF08264 Anticodon-binding domain of tRNA KHS93_07720 PF01258 Prokaryotic dksA/traR C4-type zinc finger KHS93_07725 PF01252 Signal peptidase (SPase) II KHS93_07730 PF00849 RNA pseudouridylate synthase KHS93_07730 PF01479 S4 domain KHS93_07735 PF00156 Phosphoribosyl transferase domain KHS93_07740 PF00860 Permease family KHS93_07745 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KHS93_07745 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KHS93_07750 PF01979 Amidohydrolase family KHS93_07755 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KHS93_07755 PF00117 Glutamine amidotransferase class-I KHS93_07760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KHS93_07760 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KHS93_07760 PF02142 MGS-like domain KHS93_07765 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KHS93_07765 PF00175 Oxidoreductase NAD-binding domain KHS93_07770 PF01180 Dihydroorotate dehydrogenase KHS93_07775 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KHS93_07780 PF00156 Phosphoribosyl transferase domain KHS93_07785 PF01507 Phosphoadenosine phosphosulfate reductase family KHS93_07790 PF01384 Phosphate transporter family KHS93_07795 PF01747 ATP-sulfurylase KHS93_07795 PF14306 PUA-like domain KHS93_07805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KHS93_07810 PF01903 CbiX KHS93_07820 PF05670 NFACT protein RNA binding domain KHS93_07825 PF00689 Cation transporting ATPase, C-terminus KHS93_07825 PF00690 Cation transporter/ATPase, N-terminus KHS93_07830 PF08340 Domain of unknown function (DUF1732) KHS93_07830 PF03755 YicC-like family, N-terminal region KHS93_07835 PF04025 Domain of unknown function (DUF370) KHS93_07840 PF00625 Guanylate kinase KHS93_07845 PF01192 RNA polymerase Rpb6 KHS93_07850 PF04127 DNA / pantothenate metabolism flavoprotein KHS93_07850 PF02441 Flavoprotein KHS93_07855 PF00271 Helicase conserved C-terminal domain KHS93_07855 PF17764 3′ DNA-binding domain (3′BD) KHS93_07855 PF18074 Primosomal protein N C-terminal domain KHS93_07855 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KHS93_07855 PF04851 Type III restriction enzyme, res subunit KHS93_07860 PF01327 Polypeptide deformylase KHS93_07865 PF02911 Formyl transferase, C-terminal domain KHS93_07865 PF00551 Formyl transferase KHS93_07870 PF01189 16S rRNA methyltransferase RsmB/F KHS93_07870 PF01029 NusB family KHS93_07875 PF04055 Radical SAM superfamily KHS93_07885 PF00069 Protein kinase domain KHS93_07885 PF03793 PASTA domain KHS93_07890 PF16745 RsgA N-terminal domain KHS93_07890 PF03193 RsgA GTPase KHS93_07895 PF00834 Ribulose-phosphate 3 epimerase family KHS93_07900 PF04263 Thiamin pyrophosphokinase, catalytic domain KHS93_07900 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KHS93_07905 PF08183 Stage V sporulation protein family KHS93_07910 PF00830 Ribosomal L28 family KHS93_07915 PF03780 Asp23 family, cell envelope-related function KHS93_07920 PF02734 DAK2 domain KHS93_07920 PF13684 Dihydroxyacetone kinase family KHS93_07925 PF03315 Serine dehydratase beta chain KHS93_07925 PF01842 ACT domain KHS93_07930 PF03313 Serine dehydratase alpha chain KHS93_07935 PF17191 RecG wedge domain KHS93_07935 PF00270 DEAD/DEAH box helicase KHS93_07935 PF00271 Helicase conserved C-terminal domain KHS93_07940 PF03061 Thioesterase superfamily KHS93_07945 PF02504 Fatty acid synthesis protein KHS93_07950 PF00698 Acyl transferase domain KHS93_07960 PF00550 Phosphopantetheine attachment site KHS93_07965 PF14622 Ribonuclease-III-like KHS93_07965 PF00035 Double-stranded RNA binding motif KHS93_07970 PF02463 RecF/RecN/SMC N terminal domain KHS93_07970 PF06470 SMC proteins Flexible Hinge Domain KHS93_07975 PF00448 SRP54-type protein, GTPase domain KHS93_07975 PF02881 SRP54-type protein, helical bundle domain KHS93_07985 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KHS93_07990 PF00448 SRP54-type protein, GTPase domain KHS93_07990 PF02881 SRP54-type protein, helical bundle domain KHS93_07990 PF02978 Signal peptide binding domain KHS93_07995 PF00886 Ribosomal protein S16 KHS93_08005 PF11068 YlqD protein KHS93_08010 PF05239 PRC-barrel domain KHS93_08010 PF01782 RimM N-terminal domain KHS93_08015 PF01746 tRNA (Guanine-1)-methyltransferase KHS93_08020 PF01245 Ribosomal protein L19 KHS93_08025 PF01926 50S ribosome-binding GTPase KHS93_08030 PF01351 Ribonuclease HII KHS93_08040 PF01312 FlhB HrpN YscU SpaS Family KHS93_08045 PF00549 CoA-ligase KHS93_08045 PF08442 ATP-grasp domain KHS93_08050 PF02629 CoA binding domain KHS93_08050 PF00549 CoA-ligase KHS93_08055 PF02481 DNA recombination-mediator protein A KHS93_08060 PF01131 DNA topoisomerase KHS93_08060 PF01751 Toprim domain KHS93_08060 PF01396 Topoisomerase DNA binding C4 zinc finger KHS93_08065 PF01134 Glucose inhibited division protein A KHS93_08070 PF02899 Phage integrase, N-terminal SAM-like domain KHS93_08070 PF00589 Phage integrase family KHS93_08075 PF00227 Proteasome subunit KHS93_08080 PF07724 AAA domain (Cdc48 subfamily) KHS93_08080 PF00004 ATPase family associated with various cellular activities (AAA) KHS93_08080 PF10431 C-terminal, D2-small domain, of ClpB protein KHS93_08085 PF08222 CodY helix-turn-helix domain KHS93_08085 PF06018 CodY GAF-like domain KHS93_08090 PF00460 Flagella basal body rod protein KHS93_08095 PF00460 Flagella basal body rod protein KHS93_08095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KHS93_08100 PF02049 Flagellar hook-basal body complex protein FliE KHS93_08105 PF01514 Secretory protein of YscJ/FliF family KHS93_08105 PF08345 Flagellar M-ring protein C-terminal KHS93_08110 PF01706 FliG C-terminal domain KHS93_08110 PF14841 FliG middle domain KHS93_08110 PF14842 FliG N-terminal domain KHS93_08115 PF02108 Flagellar assembly protein FliH KHS93_08120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KHS93_08120 PF18269 T3SS EscN ATPase C-terminal domain KHS93_08120 PF02874 ATP synthase alpha/beta family, beta-barrel domain KHS93_08125 PF02050 Flagellar FliJ protein KHS93_08130 PF03448 MgtE intracellular N domain KHS93_08135 PF02120 Flagellar hook-length control protein FliK KHS93_08140 PF03963 Flagellar hook capping protein - N-terminal region KHS93_08145 PF00460 Flagella basal body rod protein KHS93_08145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KHS93_08150 PF06289 Flagellar and Swarming motility proteins KHS93_08155 PF03748 Flagellar basal body-associated protein FliL KHS93_08160 PF02154 Flagellar motor switch protein FliM KHS93_08160 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KHS93_08165 PF04509 CheC-like family KHS93_08165 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KHS93_08170 PF00072 Response regulator receiver domain KHS93_08175 PF04347 Flagellar biosynthesis protein, FliO KHS93_08180 PF00813 FliP family KHS93_08185 PF01313 Bacterial export proteins, family 3 KHS93_08190 PF01311 Bacterial export proteins, family 1 KHS93_08195 PF01312 FlhB HrpN YscU SpaS Family KHS93_08200 PF00771 FHIPEP family KHS93_08205 PF00448 SRP54-type protein, GTPase domain KHS93_08210 PF10609 NUBPL iron-transfer P-loop NTPase KHS93_08215 PF01339 CheB methylesterase KHS93_08215 PF00072 Response regulator receiver domain KHS93_08220 PF01584 CheW-like domain KHS93_08220 PF02895 Signal transducing histidine kinase, homodimeric domain KHS93_08220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_08220 PF01627 Hpt domain KHS93_08220 PF07194 P2 response regulator binding domain KHS93_08225 PF01584 CheW-like domain KHS93_08230 PF04509 CheC-like family KHS93_08235 PF03975 CheD chemotactic sensory transduction KHS93_08240 PF04542 Sigma-70 region 2 KHS93_08240 PF04539 Sigma-70 region 3 KHS93_08240 PF04545 Sigma-70, region 4 KHS93_08250 PF00318 Ribosomal protein S2 KHS93_08255 PF00889 Elongation factor TS KHS93_08260 PF00696 Amino acid kinase family KHS93_08265 PF01765 Ribosome recycling factor KHS93_08270 PF01255 Putative undecaprenyl diphosphate synthase KHS93_08280 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KHS93_08280 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KHS93_08280 PF13288 DXP reductoisomerase C-terminal domain KHS93_08285 PF17820 PDZ domain KHS93_08285 PF02163 Peptidase family M50 KHS93_08290 PF03129 Anticodon binding domain KHS93_08290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KHS93_08290 PF04073 Aminoacyl-tRNA editing domain KHS93_08295 PF00929 Exonuclease KHS93_08295 PF02811 PHP domain KHS93_08295 PF14579 Helix-hairpin-helix motif KHS93_08295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KHS93_08295 PF11490 DNA polymerase III polC-type N-terminus II KHS93_08295 PF14480 DNA polymerase III polC-type N-terminus I KHS93_08295 PF07733 Bacterial DNA polymerase III alpha NTPase domain KHS93_08300 PF02576 RimP N-terminal domain KHS93_08300 PF17384 RimP C-terminal SH3 domain KHS93_08305 PF00575 S1 RNA binding domain KHS93_08305 PF13184 NusA-like KH domain KHS93_08305 PF08529 NusA N-terminal domain KHS93_08310 PF04296 Protein of unknown function (DUF448) KHS93_08315 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KHS93_08320 PF00009 Elongation factor Tu GTP binding domain KHS93_08320 PF11987 Translation-initiation factor 2 KHS93_08320 PF04760 Translation initiation factor IF-2, N-terminal region KHS93_08325 PF04456 Protein of unknown function (DUF503) KHS93_08330 PF02033 Ribosome-binding factor A KHS93_08335 PF16198 tRNA pseudouridylate synthase B C-terminal domain KHS93_08335 PF01509 TruB family pseudouridylate synthase (N terminal domain) KHS93_08340 PF01687 Riboflavin kinase KHS93_08340 PF06574 FAD synthetase KHS93_08345 PF00312 Ribosomal protein S15 KHS93_08350 PF00013 KH domain KHS93_08350 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KHS93_08350 PF01138 3' exoribonuclease family, domain 1 KHS93_08350 PF03725 3' exoribonuclease family, domain 2 KHS93_08350 PF00575 S1 RNA binding domain KHS93_08355 PF01522 Polysaccharide deacetylase KHS93_08360 PF00675 Insulinase (Peptidase family M16) KHS93_08360 PF05193 Peptidase M16 inactive domain KHS93_08365 PF05239 PRC-barrel domain KHS93_08370 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KHS93_08370 PF16924 Dipicolinate synthase subunit A N-terminal domain KHS93_08375 PF02441 Flavoprotein KHS93_08380 PF02774 Semialdehyde dehydrogenase, dimerisation domain KHS93_08380 PF01118 Semialdehyde dehydrogenase, NAD binding domain KHS93_08385 PF00696 Amino acid kinase family KHS93_08385 PF13840 ACT domain KHS93_08390 PF00701 Dihydrodipicolinate synthetase family KHS93_08395 PF00753 Metallo-beta-lactamase superfamily KHS93_08395 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KHS93_08395 PF17770 Ribonuclease J C-terminal domain KHS93_08400 PF00574 Clp protease KHS93_08405 PF14035 YlzJ-like protein KHS93_08410 PF17854 FtsK alpha domain KHS93_08410 PF09397 Ftsk gamma domain KHS93_08410 PF01580 FtsK/SpoIIIE family KHS93_08415 PF07702 UTRA domain KHS93_08415 PF00392 Bacterial regulatory proteins, gntR family KHS93_08420 PF07690 Major Facilitator Superfamily KHS93_08425 PF01047 MarR family KHS93_08430 PF03176 MMPL family KHS93_08435 PF05193 Peptidase M16 inactive domain KHS93_08440 PF00675 Insulinase (Peptidase family M16) KHS93_08440 PF05193 Peptidase M16 inactive domain KHS93_08450 PF11588 Protein of unknown function (DUF3243) KHS93_08455 PF11868 Protein of unknown function (DUF3388) KHS93_08460 PF13464 Domain of unknown function (DUF4115) KHS93_08465 PF01066 CDP-alcohol phosphatidyltransferase KHS93_08470 PF02464 Competence-damaged protein KHS93_08470 PF18146 Damage-inducible protein CinA KH domain KHS93_08470 PF00994 Probable molybdopterin binding domain KHS93_08475 PF00154 recA bacterial DNA recombination protein KHS93_08480 PF00144 Beta-lactamase KHS93_08485 PF01966 HD domain KHS93_08485 PF00013 KH domain KHS93_08485 PF12072 Domain of unknown function (DUF3552) KHS93_08490 PF13277 YmdB-like protein KHS93_08495 PF04232 Stage V sporulation protein S (SpoVS) KHS93_08500 PF08240 Alcohol dehydrogenase GroES-like domain KHS93_08500 PF00107 Zinc-binding dehydrogenase KHS93_08505 PF00155 Aminotransferase class I and II KHS93_08510 PF04055 Radical SAM superfamily KHS93_08510 PF01938 TRAM domain KHS93_08510 PF00919 Uncharacterized protein family UPF0004 KHS93_08515 PF06133 Control of competence regulator ComK, YlbF/YmcA KHS93_08520 PF10628 Outer spore coat protein E (CotE) KHS93_08525 PF05188 MutS domain II KHS93_08525 PF05190 MutS family domain IV KHS93_08525 PF00488 MutS domain V KHS93_08525 PF01624 MutS domain I KHS93_08525 PF05192 MutS domain III KHS93_08530 PF01119 DNA mismatch repair protein, C-terminal domain KHS93_08530 PF08676 MutL C terminal dimerisation domain KHS93_08540 PF00753 Metallo-beta-lactamase superfamily KHS93_08545 PF00698 Acyl transferase domain KHS93_08550 PF00698 Acyl transferase domain KHS93_08555 PF00698 Acyl transferase domain KHS93_08560 PF00550 Phosphopantetheine attachment site KHS93_08565 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal KHS93_08565 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal KHS93_08570 PF00378 Enoyl-CoA hydratase/isomerase KHS93_08575 PF00378 Enoyl-CoA hydratase/isomerase KHS93_08580 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_08580 PF00501 AMP-binding enzyme KHS93_08580 PF14765 Polyketide synthase dehydratase KHS93_08580 PF00550 Phosphopantetheine attachment site KHS93_08580 PF08659 KR domain KHS93_08580 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_08580 PF13193 AMP-binding enzyme C-terminal domain KHS93_08580 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_08580 PF00668 Condensation domain KHS93_08585 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_08585 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_08585 PF14765 Polyketide synthase dehydratase KHS93_08585 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_08585 PF08659 KR domain KHS93_08585 PF00550 Phosphopantetheine attachment site KHS93_08590 PF08242 Methyltransferase domain KHS93_08590 PF00550 Phosphopantetheine attachment site KHS93_08590 PF08242 Methyltransferase domain KHS93_08590 PF08659 KR domain KHS93_08590 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_08590 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_08590 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_08590 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_08590 PF00550 Phosphopantetheine attachment site KHS93_08590 PF14765 Polyketide synthase dehydratase KHS93_08590 PF08659 KR domain KHS93_08590 PF14765 Polyketide synthase dehydratase KHS93_08590 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_08590 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_08595 PF00501 AMP-binding enzyme KHS93_08595 PF13193 AMP-binding enzyme C-terminal domain KHS93_08595 PF00668 Condensation domain KHS93_08595 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_08595 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_08595 PF08659 KR domain KHS93_08595 PF00550 Phosphopantetheine attachment site KHS93_08595 PF14765 Polyketide synthase dehydratase KHS93_08595 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_08600 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_08600 PF00550 Phosphopantetheine attachment site KHS93_08600 PF14765 Polyketide synthase dehydratase KHS93_08600 PF00975 Thioesterase domain KHS93_08600 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_08600 PF08242 Methyltransferase domain KHS93_08600 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_08605 PF00067 Cytochrome P450 KHS93_08610 PF14040 Deoxyribonuclease NucA/NucB KHS93_08615 PF06912 Protein of unknown function (DUF1275) KHS93_08625 PF00082 Subtilase family KHS93_08635 PF05908 Poly-gamma-glutamate hydrolase KHS93_08640 PF02566 OsmC-like protein KHS93_08645 PF00893 Small Multidrug Resistance protein KHS93_08650 PF00893 Small Multidrug Resistance protein KHS93_08660 PF12788 YmaF family KHS93_08670 PF17209 Hfq protein KHS93_08675 PF14157 YmzC-like protein KHS93_08685 PF07972 NrdI Flavodoxin like KHS93_08690 PF02867 Ribonucleotide reductase, barrel domain KHS93_08690 PF00317 Ribonucleotide reductase, all-alpha domain KHS93_08690 PF08343 Ribonucleotide reductase N-terminal KHS93_08695 PF00268 Ribonucleotide reductase, small chain KHS93_08705 PF01520 N-acetylmuramoyl-L-alanine amidase KHS93_08705 PF05036 Sporulation related domain KHS93_08710 PF00004 ATPase family associated with various cellular activities (AAA) KHS93_08710 PF17866 AAA lid domain KHS93_08715 PF01926 50S ribosome-binding GTPase KHS93_08715 PF16360 GTP-binding GTPase Middle Region KHS93_08715 PF13167 GTP-binding GTPase N-terminal KHS93_08720 PF06838 Methionine gamma-lyase KHS93_08725 PF13411 MerR HTH family regulatory protein KHS93_08730 PF00120 Glutamine synthetase, catalytic domain KHS93_08730 PF03951 Glutamine synthetase, beta-Grasp domain KHS93_08745 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KHS93_08745 PF04616 Glycosyl hydrolases family 43 KHS93_08750 PF00480 ROK family KHS93_08755 PF01261 Xylose isomerase-like TIM barrel KHS93_08760 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KHS93_08760 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KHS93_08765 PF00391 PEP-utilising enzyme, mobile domain KHS93_08765 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KHS93_08785 PF13280 WYL domain KHS93_08785 PF08279 HTH domain KHS93_08790 PF05163 DinB family KHS93_08795 PF08240 Alcohol dehydrogenase GroES-like domain KHS93_08795 PF00107 Zinc-binding dehydrogenase KHS93_08810 PF17094 Uncharacterised protein family (UPF0715) KHS93_08815 PF00583 Acetyltransferase (GNAT) family KHS93_08815 PF14268 YoaP-like KHS93_08835 PF18416 N-acetylglucosamine binding protein domain 2 KHS93_08835 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KHS93_08840 PF09680 Family of unknown function KHS93_08855 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain KHS93_08855 PF12708 Pectate lyase superfamily protein KHS93_08860 PF00692 dUTPase KHS93_08865 PF05908 Poly-gamma-glutamate hydrolase KHS93_08880 PF10710 Protein of unknown function (DUF2512) KHS93_08890 PF01726 LexA DNA binding domain KHS93_08890 PF00717 Peptidase S24-like KHS93_08895 PF01476 LysM domain KHS93_08900 PF00239 Resolvase, N terminal domain KHS93_08905 PF05979 Bacterial protein of unknown function (DUF896) KHS93_08910 PF02780 Transketolase, C-terminal domain KHS93_08910 PF00456 Transketolase, thiamine diphosphate binding domain KHS93_08910 PF02779 Transketolase, pyrimidine binding domain KHS93_08915 PF10747 Sporulation inhibitor of replication protein SirA KHS93_08920 PF03672 Uncharacterised protein family (UPF0154) KHS93_08925 PF09388 Spo0E like sporulation regulatory protein KHS93_08930 PF02683 Cytochrome C biogenesis protein transmembrane region KHS93_08935 PF00072 Response regulator receiver domain KHS93_08940 PF07301 Protein of unknown function (DUF1453) KHS93_08945 PF11084 Protein of unknown function (DUF2621) KHS93_08955 PF08179 Small acid-soluble spore protein P family KHS93_08965 PF00330 Aconitase family (aconitate hydratase) KHS93_08965 PF00694 Aconitase C-terminal domain KHS93_08970 PF00578 AhpC/TSA family KHS93_08975 PF13040 Fur-regulated basic protein B KHS93_08980 PF08177 Small acid-soluble spore protein N family KHS93_08990 PF03061 Thioesterase superfamily KHS93_09000 PF01521 Iron-sulphur cluster biosynthesis KHS93_09005 PF02660 Glycerol-3-phosphate acyltransferase KHS93_09010 PF13380 CoA binding domain KHS93_09015 PF00204 DNA gyrase B KHS93_09015 PF00986 DNA gyrase B subunit, carboxyl terminus KHS93_09015 PF01751 Toprim domain KHS93_09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_09020 PF00521 DNA gyrase/topoisomerase IV, subunit A KHS93_09020 PF03989 DNA gyrase C-terminal domain, beta-propeller KHS93_09030 PF01235 Sodium:alanine symporter family KHS93_09035 PF00294 pfkB family carbohydrate kinase KHS93_09040 PF08240 Alcohol dehydrogenase GroES-like domain KHS93_09040 PF00107 Zinc-binding dehydrogenase KHS93_09045 PF01081 KDPG and KHG aldolase KHS93_09050 PF03786 D-mannonate dehydratase (UxuA) KHS93_09055 PF00106 short chain dehydrogenase KHS93_09060 PF00356 Bacterial regulatory proteins, lacI family KHS93_09065 PF07690 Major Facilitator Superfamily KHS93_09075 PF13761 Domain of unknown function (DUF4166) KHS93_09080 PF14158 YndJ-like protein KHS93_09090 PF00942 Cellulose binding domain KHS93_09090 PF00150 Cellulase (glycosyl hydrolase family 5) KHS93_09100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_09100 PF00512 His Kinase A (phospho-acceptor) domain KHS93_09105 PF00486 Transcriptional regulatory protein, C terminal KHS93_09105 PF00072 Response regulator receiver domain KHS93_09110 PF17189 Glycosyl hydrolase family 30 beta sandwich domain KHS93_09110 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain KHS93_09115 PF03422 Carbohydrate binding module (family 6) KHS93_09115 PF04616 Glycosyl hydrolases family 43 KHS93_09120 PF13193 AMP-binding enzyme C-terminal domain KHS93_09120 PF00668 Condensation domain KHS93_09120 PF00550 Phosphopantetheine attachment site KHS93_09120 PF00975 Thioesterase domain KHS93_09120 PF00501 AMP-binding enzyme KHS93_09125 PF00501 AMP-binding enzyme KHS93_09125 PF00668 Condensation domain KHS93_09125 PF00550 Phosphopantetheine attachment site KHS93_09125 PF13193 AMP-binding enzyme C-terminal domain KHS93_09130 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_09130 PF00202 Aminotransferase class-III KHS93_09130 PF00501 AMP-binding enzyme KHS93_09130 PF13193 AMP-binding enzyme C-terminal domain KHS93_09130 PF00668 Condensation domain KHS93_09130 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_09130 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_09130 PF00550 Phosphopantetheine attachment site KHS93_09135 PF00698 Acyl transferase domain KHS93_09145 PF01144 Coenzyme A transferase KHS93_09150 PF01144 Coenzyme A transferase KHS93_09160 PF00067 Cytochrome P450 KHS93_09165 PF06968 Biotin and Thiamin Synthesis associated domain KHS93_09165 PF04055 Radical SAM superfamily KHS93_09175 PF00155 Aminotransferase class I and II KHS93_09180 PF00202 Aminotransferase class-III KHS93_09185 PF03744 6-carboxyhexanoate--CoA ligase KHS93_09190 PF04138 GtrA-like protein KHS93_09195 PF00483 Nucleotidyl transferase KHS93_09200 PF09335 SNARE associated Golgi protein KHS93_09205 PF01039 Carboxyl transferase domain KHS93_09210 PF00378 Enoyl-CoA hydratase/isomerase KHS93_09215 PF00682 HMGL-like KHS93_09220 PF00364 Biotin-requiring enzyme KHS93_09225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KHS93_09225 PF00289 Biotin carboxylase, N-terminal domain KHS93_09225 PF02785 Biotin carboxylase C-terminal domain KHS93_09230 PF00501 AMP-binding enzyme KHS93_09230 PF13193 AMP-binding enzyme C-terminal domain KHS93_09235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KHS93_09235 PF02770 Acyl-CoA dehydrogenase, middle domain KHS93_09235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KHS93_09240 PF02638 Glycosyl hydrolase-like 10 KHS93_09245 PF07098 Protein of unknown function (DUF1360) KHS93_09250 PF00501 AMP-binding enzyme KHS93_09250 PF13193 AMP-binding enzyme C-terminal domain KHS93_09250 PF00668 Condensation domain KHS93_09250 PF00975 Thioesterase domain KHS93_09250 PF00550 Phosphopantetheine attachment site KHS93_09255 PF00501 AMP-binding enzyme KHS93_09255 PF00668 Condensation domain KHS93_09255 PF13193 AMP-binding enzyme C-terminal domain KHS93_09255 PF00550 Phosphopantetheine attachment site KHS93_09260 PF00550 Phosphopantetheine attachment site KHS93_09260 PF00668 Condensation domain KHS93_09260 PF13193 AMP-binding enzyme C-terminal domain KHS93_09260 PF00501 AMP-binding enzyme KHS93_09265 PF00668 Condensation domain KHS93_09265 PF00501 AMP-binding enzyme KHS93_09265 PF00550 Phosphopantetheine attachment site KHS93_09265 PF13193 AMP-binding enzyme C-terminal domain KHS93_09270 PF00668 Condensation domain KHS93_09270 PF13193 AMP-binding enzyme C-terminal domain KHS93_09270 PF00501 AMP-binding enzyme KHS93_09270 PF00550 Phosphopantetheine attachment site KHS93_09275 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family KHS93_09280 PF01263 Aldose 1-epimerase KHS93_09285 PF01554 MatE KHS93_09290 PF16800 IseA DL-endopeptidase inhibitor KHS93_09295 PF04740 LXG domain of WXG superfamily KHS93_09315 PF01510 N-acetylmuramoyl-L-alanine amidase KHS93_09315 PF01476 LysM domain KHS93_09315 PF01471 Putative peptidoglycan binding domain KHS93_09320 PF05105 Bacteriophage holin family KHS93_09340 PF12708 Pectate lyase superfamily protein KHS93_09340 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain KHS93_09345 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KHS93_09345 PF01476 LysM domain KHS93_09420 PF03354 Phage Terminase KHS93_09445 PF00589 Phage integrase family KHS93_09485 PF17356 Phage-like element PBSX protein XtrA KHS93_09530 PF01381 Helix-turn-helix KHS93_09555 PF00589 Phage integrase family KHS93_09560 PF12728 Helix-turn-helix domain KHS93_09570 PF07690 Major Facilitator Superfamily KHS93_09580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KHS93_09580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KHS93_09580 PF02824 TGS domain KHS93_09580 PF03129 Anticodon binding domain KHS93_09585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_09585 PF03466 LysR substrate binding domain KHS93_09590 PF08240 Alcohol dehydrogenase GroES-like domain KHS93_09590 PF00107 Zinc-binding dehydrogenase KHS93_09595 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KHS93_09595 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHS93_09600 PF01493 GXGXG motif KHS93_09600 PF01645 Conserved region in glutamate synthase KHS93_09600 PF00310 Glutamine amidotransferases class-II KHS93_09600 PF04898 Glutamate synthase central domain KHS93_09605 PF03466 LysR substrate binding domain KHS93_09605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_09610 PF00696 Amino acid kinase family KHS93_09610 PF01472 PUA domain KHS93_09615 PF14748 Pyrroline-5-carboxylate reductase dimerisation KHS93_09615 PF03807 NADP oxidoreductase coenzyme F420-dependent KHS93_09620 PF02334 Replication terminator protein KHS93_09625 PF00106 short chain dehydrogenase KHS93_09630 PF06103 Bacterial protein of unknown function (DUF948) KHS93_09640 PF07690 Major Facilitator Superfamily KHS93_09645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KHS93_09645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KHS93_09650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KHS93_09650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KHS93_09655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KHS93_09655 PF00384 Molybdopterin oxidoreductase KHS93_09655 PF01568 Molydopterin dinucleotide binding domain KHS93_09680 PF01638 HxlR-like helix-turn-helix KHS93_09685 PF01588 Putative tRNA binding domain KHS93_09695 PF00440 Bacterial regulatory proteins, tetR family KHS93_09695 PF13305 Tetracyclin repressor-like, C-terminal domain KHS93_09700 PF00753 Metallo-beta-lactamase superfamily KHS93_09710 PF01022 Bacterial regulatory protein, arsR family KHS93_09720 PF04238 Protein of unknown function (DUF420) KHS93_09725 PF18846 Bacterial archaeo-eukaryotic release factor family 5 KHS93_09735 PF02016 LD-carboxypeptidase N-terminal domain KHS93_09735 PF17676 LD-carboxypeptidase C-terminal domain KHS93_09745 PF01476 LysM domain KHS93_09745 PF06725 3D domain KHS93_09750 PF09382 RQC domain KHS93_09750 PF16124 RecQ zinc-binding KHS93_09750 PF00271 Helicase conserved C-terminal domain KHS93_09750 PF00270 DEAD/DEAH box helicase KHS93_09750 PF00570 HRDC domain KHS93_09760 PF02525 Flavodoxin-like fold KHS93_09765 PF01258 Prokaryotic dksA/traR C4-type zinc finger KHS93_09780 PF00011 Hsp20/alpha crystallin family KHS93_09795 PF08000 Bacterial PH domain KHS93_09810 PF00171 Aldehyde dehydrogenase family KHS93_09815 PF13243 Squalene-hopene cyclase C-terminal domain KHS93_09815 PF13249 Squalene-hopene cyclase N-terminal domain KHS93_09820 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KHS93_09820 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KHS93_09825 PF00209 Sodium:neurotransmitter symporter family KHS93_09830 PF01758 Sodium Bile acid symporter family KHS93_09835 PF00753 Metallo-beta-lactamase superfamily KHS93_09840 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KHS93_09840 PF02817 e3 binding domain KHS93_09840 PF00364 Biotin-requiring enzyme KHS93_09845 PF00676 Dehydrogenase E1 component KHS93_09845 PF16870 2-oxoglutarate dehydrogenase C-terminal KHS93_09845 PF02779 Transketolase, pyrimidine binding domain KHS93_09850 PF00092 von Willebrand factor type A domain KHS93_09855 PF07728 AAA domain (dynein-related subfamily) KHS93_09860 PF13627 Prokaryotic lipoprotein-attachment site KHS93_09860 PF00080 Copper/zinc superoxide dismutase (SODC) KHS93_09865 PF01476 LysM domain KHS93_09865 PF00877 NlpC/P60 family KHS93_09870 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KHS93_09875 PF02457 DisA bacterial checkpoint controller nucleotide-binding KHS93_09875 PF10372 Bacterial membrane-spanning protein N-terminus KHS93_09880 PF01554 MatE KHS93_09885 PF01740 STAS domain KHS93_09890 PF02585 GlcNAc-PI de-N-acetylase KHS93_09895 PF08830 Protein of unknown function (DUF1806) KHS93_09905 PF00892 EamA-like transporter family KHS93_09920 PF14552 Tautomerase enzyme KHS93_09930 PF01638 HxlR-like helix-turn-helix KHS93_09935 PF00881 Nitroreductase family KHS93_09940 PF01738 Dienelactone hydrolase family KHS93_09945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHS93_09950 PF11755 Protein of unknown function (DUF3311) KHS93_09955 PF00474 Sodium:solute symporter family KHS93_09965 PF00232 Glycosyl hydrolase family 1 KHS93_09970 PF00392 Bacterial regulatory proteins, gntR family KHS93_09970 PF07702 UTRA domain KHS93_09975 PF17820 PDZ domain KHS93_09975 PF03572 Peptidase family S41 KHS93_09975 PF01471 Putative peptidoglycan binding domain KHS93_09980 PF08241 Methyltransferase domain KHS93_09990 PF02557 D-alanyl-D-alanine carboxypeptidase KHS93_09995 PF01048 Phosphorylase superfamily KHS93_10005 PF14191 YodL-like KHS93_10010 PF01569 PAP2 superfamily KHS93_10015 PF14162 YozD-like protein KHS93_10035 PF06855 YozE SAM-like fold KHS93_10040 PF14122 YokU-like protein, putative antitoxin KHS93_10045 PF12544 Lysine-2,3-aminomutase KHS93_10050 PF00583 Acetyltransferase (GNAT) family KHS93_10055 PF01546 Peptidase family M20/M25/M40 KHS93_10055 PF07687 Peptidase dimerisation domain KHS93_10060 PF01144 Coenzyme A transferase KHS93_10065 PF01144 Coenzyme A transferase KHS93_10070 PF00202 Aminotransferase class-III KHS93_10075 PF06445 GyrI-like small molecule binding domain KHS93_10085 PF00583 Acetyltransferase (GNAT) family KHS93_10090 PF00535 Glycosyl transferase family 2 KHS93_10105 PF12996 DUF based on E. rectale Gene description (DUF3880) KHS93_10110 PF02333 Phytase KHS93_10115 PF08485 Polysaccharide biosynthesis protein C-terminal KHS93_10115 PF02719 Polysaccharide biosynthesis protein KHS93_10130 PF11518 Protein of unknown function (DUF3221) KHS93_10150 PF14037 YoqO-like protein KHS93_10160 PF18801 response regulator aspartate phosphatase H, N terminal KHS93_10180 PF16219 Domain of unknown function (DUF4879) KHS93_10205 PF04740 LXG domain of WXG superfamily KHS93_10205 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH KHS93_10210 PF09346 SMI1 / KNR4 family (SUKH-1) KHS93_10220 PF00239 Resolvase, N terminal domain KHS93_10220 PF07508 Recombinase KHS93_10225 PF02719 Polysaccharide biosynthesis protein KHS93_10230 PF01641 SelR domain KHS93_10235 PF01625 Peptide methionine sulfoxide reductase KHS93_10240 PF01047 MarR family KHS93_10245 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) KHS93_10250 PF13472 GDSL-like Lipase/Acylhydrolase family KHS93_10255 PF02630 SCO1/SenC KHS93_10260 PF10751 Protein of unknown function (DUF2535) KHS93_10265 PF00585 C-terminal regulatory domain of Threonine dehydratase KHS93_10265 PF00291 Pyridoxal-phosphate dependent enzyme KHS93_10270 PF08461 Ribonuclease R winged-helix domain KHS93_10270 PF00158 Sigma-54 interaction domain KHS93_10275 PF03006 Haemolysin-III related KHS93_10285 PF00186 Dihydrofolate reductase KHS93_10290 PF00303 Thymidylate synthase KHS93_10295 PF14005 YpjP-like protein KHS93_10300 PF04445 Putative SAM-dependent methyltransferase KHS93_10305 PF06491 Disulphide isomerase KHS93_10310 PF00920 Dehydratase family KHS93_10315 PF13769 Virulence factor KHS93_10315 PF08712 Scaffold protein Nfu/NifU N terminal KHS93_10320 PF01966 HD domain KHS93_10325 PF00255 Glutathione peroxidase KHS93_10330 PF04204 Homoserine O-succinyltransferase KHS93_10335 PF00534 Glycosyl transferases group 1 KHS93_10335 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KHS93_10345 PF00313 'Cold-shock' DNA-binding domain KHS93_10355 PF10819 Protein of unknown function (DUF2564) KHS93_10360 PF10782 Zinc-finger KHS93_10365 PF13456 Reverse transcriptase-like KHS93_10370 PF02592 Putative vitamin uptake transporter KHS93_10375 PF13456 Reverse transcriptase-like KHS93_10385 PF01367 5'-3' exonuclease, C-terminal SAM fold KHS93_10385 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KHS93_10395 PF10752 Protein of unknown function (DUF2533) KHS93_10400 PF00350 Dynamin family KHS93_10410 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family KHS93_10415 PF02797 Chalcone and stilbene synthases, C-terminal domain KHS93_10415 PF00195 Chalcone and stilbene synthases, N-terminal domain KHS93_10440 PF00857 Isochorismatase family KHS93_10450 PF00860 Permease family KHS93_10455 PF00156 Phosphoribosyl transferase domain KHS93_10460 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KHS93_10465 PF13307 Helicase C-terminal domain KHS93_10475 PF14139 YpzG-like protein KHS93_10480 PF02926 THUMP domain KHS93_10480 PF01170 Putative RNA methylase family UPF0020 KHS93_10490 PF05103 DivIVA protein KHS93_10495 PF06908 YspA SLOG family KHS93_10500 PF11122 Inner spore coat protein D KHS93_10510 PF13482 RNase_H superfamily KHS93_10515 PF00270 DEAD/DEAH box helicase KHS93_10515 PF00271 Helicase conserved C-terminal domain KHS93_10515 PF09369 Domain of unknown function (DUF1998) KHS93_10520 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KHS93_10530 PF14179 YppG-like protein KHS93_10535 PF14178 YppF-like protein KHS93_10540 PF08807 Bacterial domain of unknown function (DUF1798) KHS93_10545 PF17522 Family of unknown function (DUF5446) KHS93_10555 PF10720 Protein of unknown function (DUF2515) KHS93_10560 PF03838 Recombination protein U KHS93_10565 PF00912 Transglycosylase KHS93_10565 PF00905 Penicillin binding protein transpeptidase domain KHS93_10575 PF10576 Iron-sulfur binding domain of endonuclease III KHS93_10575 PF00633 Helix-hairpin-helix motif KHS93_10575 PF00730 HhH-GPD superfamily base excision DNA repair protein KHS93_10580 PF07261 Replication initiation and membrane attachment KHS93_10585 PF00152 tRNA synthetases class II (D, K and N) KHS93_10585 PF01336 OB-fold nucleic acid binding domain KHS93_10590 PF00155 Aminotransferase class I and II KHS93_10595 PF17881 Domain of unknown function (DUF5590) KHS93_10595 PF03413 Peptidase propeptide and YPEB domain KHS93_10600 PF14084 Protein of unknown function (DUF4264) KHS93_10605 PF13307 Helicase C-terminal domain KHS93_10605 PF04851 Type III restriction enzyme, res subunit KHS93_10605 PF00929 Exonuclease KHS93_10610 PF02261 Aspartate decarboxylase KHS93_10615 PF02569 Pantoate-beta-alanine ligase KHS93_10620 PF02548 Ketopantoate hydroxymethyltransferase KHS93_10625 PF03099 Biotin/lipoate A/B protein ligase family KHS93_10625 PF08279 HTH domain KHS93_10625 PF02237 Biotin protein ligase C terminal domain KHS93_10630 PF13735 tRNA nucleotidyltransferase domain 2 putative KHS93_10630 PF12627 Probable RNA and SrmB- binding site of polymerase A KHS93_10630 PF01743 Poly A polymerase head domain KHS93_10635 PF13439 Glycosyltransferase Family 4 KHS93_10635 PF00534 Glycosyl transferases group 1 KHS93_10640 PF02585 GlcNAc-PI de-N-acetylase KHS93_10645 PF02142 MGS-like domain KHS93_10650 PF05173 Dihydrodipicolinate reductase, C-terminus KHS93_10650 PF01113 Dihydrodipicolinate reductase, N-terminus KHS93_10655 PF03819 MazG nucleotide pyrophosphohydrolase domain KHS93_10660 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHS93_10660 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHS93_10665 PF00190 Cupin KHS93_10670 PF09577 Sporulation protein YpjB (SpoYpjB) KHS93_10675 PF07187 Protein of unknown function (DUF1405) KHS93_10680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KHS93_10680 PF00032 Cytochrome b(C-terminal)/b6/petD KHS93_10685 PF00033 Cytochrome b/b6/petB KHS93_10690 PF00355 Rieske [2Fe-2S] domain KHS93_10695 PF10673 Protein of unknown function (DUF2487) KHS93_10700 PF08858 IDEAL domain KHS93_10700 PF08864 UPF0302 domain KHS93_10710 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KHS93_10715 PF01842 ACT domain KHS93_10715 PF02153 Prephenate dehydrogenase KHS93_10720 PF00155 Aminotransferase class I and II KHS93_10725 PF00290 Tryptophan synthase alpha chain KHS93_10730 PF00291 Pyridoxal-phosphate dependent enzyme KHS93_10735 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KHS93_10740 PF00218 Indole-3-glycerol phosphate synthase KHS93_10745 PF02885 Glycosyl transferase family, helical bundle domain KHS93_10745 PF00591 Glycosyl transferase family, a/b domain KHS93_10750 PF04715 Anthranilate synthase component I, N terminal region KHS93_10750 PF00425 chorismate binding enzyme KHS93_10755 PF07736 Chorismate mutase type I KHS93_10760 PF01761 3-dehydroquinate synthase KHS93_10765 PF01264 Chorismate synthase KHS93_10770 PF03705 CheR methyltransferase, all-alpha domain KHS93_10770 PF01739 CheR methyltransferase, SAM binding domain KHS93_10775 PF00334 Nucleoside diphosphate kinase KHS93_10780 PF00348 Polyprenyl synthetase KHS93_10785 PF01209 ubiE/COQ5 methyltransferase family KHS93_10790 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KHS93_10795 PF02081 Tryptophan RNA-binding attenuator protein KHS93_10800 PF01227 GTP cyclohydrolase I KHS93_10805 PF00216 Bacterial DNA-binding protein KHS93_10810 PF09547 Stage IV sporulation protein A (spore_IV_A) KHS93_10820 PF10966 Protein of unknown function (DUF2768) KHS93_10825 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KHS93_10825 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KHS93_10830 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KHS93_10830 PF01926 50S ribosome-binding GTPase KHS93_10840 PF14140 YpzI-like protein KHS93_10845 PF01070 FMN-dependent dehydrogenase KHS93_10850 PF00575 S1 RNA binding domain KHS93_10855 PF02224 Cytidylate kinase KHS93_10860 PF17313 Family of unknown function (DUF5359) KHS93_10865 PF07238 PilZ domain KHS93_10865 PF12945 Flagellar protein YcgR KHS93_10870 PF03413 Peptidase propeptide and YPEB domain KHS93_10870 PF14620 YpeB sporulation KHS93_10875 PF07486 Cell Wall Hydrolase KHS93_10875 PF01471 Putative peptidoglycan binding domain KHS93_10880 PF13367 PrsW family intramembrane metalloprotease KHS93_10890 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KHS93_10890 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KHS93_10895 PF05389 Negative regulator of genetic competence (MecA) KHS93_10900 PF00149 Calcineurin-like phosphoesterase KHS93_10905 PF10864 Protein of unknown function (DUF2663) KHS93_10910 PF01476 LysM domain KHS93_10915 PF02517 CPBP intramembrane metalloprotease KHS93_10920 PF00270 DEAD/DEAH box helicase KHS93_10920 PF00271 Helicase conserved C-terminal domain KHS93_10925 PF14493 Helix-turn-helix domain KHS93_10935 PF12822 ECF transporter, substrate-specific component KHS93_10940 PF01842 ACT domain KHS93_10940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KHS93_10940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KHS93_10950 PF04542 Sigma-70 region 2 KHS93_10950 PF08281 Sigma-70, region 4 KHS93_10955 PF00672 HAMP domain KHS93_10955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_10955 PF18698 Histidine kinase sensor domain KHS93_10955 PF00512 His Kinase A (phospho-acceptor) domain KHS93_10955 PF00989 PAS fold KHS93_10960 PF00072 Response regulator receiver domain KHS93_10960 PF00486 Transcriptional regulatory protein, C terminal KHS93_10965 PF01578 Cytochrome C assembly protein KHS93_10970 PF05140 ResB-like family KHS93_10975 PF00578 AhpC/TSA family KHS93_10980 PF01479 S4 domain KHS93_10980 PF00849 RNA pseudouridylate synthase KHS93_10985 PF07670 Nucleoside recognition KHS93_10990 PF07670 Nucleoside recognition KHS93_10995 PF07943 Penicillin-binding protein 5, C-terminal domain KHS93_10995 PF00768 D-alanyl-D-alanine carboxypeptidase KHS93_11000 PF13047 Protein of unknown function (DUF3907) KHS93_11005 PF04079 Segregation and condensation complex subunit ScpB KHS93_11010 PF02616 Segregation and condensation protein ScpA KHS93_11020 PF03745 Domain of unknown function (DUF309) KHS93_11025 PF00583 Acetyltransferase (GNAT) family KHS93_11030 PF00885 6,7-dimethyl-8-ribityllumazine synthase KHS93_11035 PF00925 GTP cyclohydrolase II KHS93_11035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KHS93_11040 PF00677 Lumazine binding domain KHS93_11045 PF01872 RibD C-terminal domain KHS93_11045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KHS93_11055 PF10502 Signal peptidase, peptidase S26 KHS93_11065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KHS93_11070 PF06207 Protein of unknown function (DUF1002) KHS93_11075 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KHS93_11075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KHS93_11080 PF03323 Bacillus/Clostridium GerA spore germination protein KHS93_11085 PF14097 Stage V sporulation protein AE1 KHS93_11090 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KHS93_11095 PF07451 Stage V sporulation protein AD (SpoVAD) KHS93_11100 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KHS93_11105 PF13782 Stage V sporulation protein AB KHS93_11110 PF12164 Stage V sporulation protein AA KHS93_11115 PF04539 Sigma-70 region 3 KHS93_11115 PF04545 Sigma-70, region 4 KHS93_11115 PF04542 Sigma-70 region 2 KHS93_11120 PF13581 Histidine kinase-like ATPase domain KHS93_11125 PF01740 STAS domain KHS93_11130 PF00768 D-alanyl-D-alanine carboxypeptidase KHS93_11130 PF07943 Penicillin-binding protein 5, C-terminal domain KHS93_11135 PF01048 Phosphorylase superfamily KHS93_11140 PF01676 Metalloenzyme superfamily KHS93_11145 PF00589 Phage integrase family KHS93_11145 PF02899 Phage integrase, N-terminal SAM-like domain KHS93_11150 PF14004 Protein of unknown function (DUF4227) KHS93_11155 PF01475 Ferric uptake regulator family KHS93_11160 PF01944 Stage II sporulation protein M KHS93_11175 PF03949 Malic enzyme, NAD binding domain KHS93_11175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KHS93_11175 PF00390 Malic enzyme, N-terminal domain KHS93_11180 PF03553 Na+/H+ antiporter family KHS93_11185 PF10415 Fumarase C C-terminus KHS93_11185 PF00206 Lyase KHS93_11190 PF17763 Glutaminase/Asparaginase C-terminal domain KHS93_11190 PF00710 Asparaginase, N-terminal KHS93_11195 PF01381 Helix-turn-helix KHS93_11205 PF00293 NUDIX domain KHS93_11210 PF13072 Mother cell inhibitor of FtsZ KHS93_11215 PF00248 Aldo/keto reductase family KHS93_11225 PF12146 Serine aminopeptidase, S33 KHS93_11230 PF10827 Protein of unknown function (DUF2552) KHS93_11235 PF01521 Iron-sulphur cluster biosynthesis KHS93_11240 PF13673 Acetyltransferase (GNAT) domain KHS93_11240 PF04229 GrpB protein KHS93_11245 PF03992 Antibiotic biosynthesis monooxygenase KHS93_11250 PF00583 Acetyltransferase (GNAT) family KHS93_11255 PF00817 impB/mucB/samB family KHS93_11255 PF11799 impB/mucB/samB family C-terminal domain KHS93_11260 PF08863 YolD-like protein KHS93_11265 PF14164 YqzH-like protein KHS93_11270 PF01594 AI-2E family transporter KHS93_11285 PF00485 Phosphoribulokinase / Uridine kinase family KHS93_11290 PF00291 Pyridoxal-phosphate dependent enzyme KHS93_11295 PF00106 short chain dehydrogenase KHS93_11300 PF00753 Metallo-beta-lactamase superfamily KHS93_11305 PF14748 Pyrroline-5-carboxylate reductase dimerisation KHS93_11305 PF03807 NADP oxidoreductase coenzyme F420-dependent KHS93_11310 PF00378 Enoyl-CoA hydratase/isomerase KHS93_11315 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal KHS93_11315 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal KHS93_11320 PF00067 Cytochrome P450 KHS93_11325 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_11325 PF08659 KR domain KHS93_11325 PF00550 Phosphopantetheine attachment site KHS93_11325 PF14765 Polyketide synthase dehydratase KHS93_11325 PF08242 Methyltransferase domain KHS93_11325 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_11325 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_11330 PF08659 KR domain KHS93_11330 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_11330 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_11330 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_11330 PF00550 Phosphopantetheine attachment site KHS93_11330 PF14765 Polyketide synthase dehydratase KHS93_11330 PF08242 Methyltransferase domain KHS93_11335 PF00501 AMP-binding enzyme KHS93_11335 PF00668 Condensation domain KHS93_11335 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_11335 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_11335 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_11335 PF13193 AMP-binding enzyme C-terminal domain KHS93_11335 PF08659 KR domain KHS93_11335 PF00550 Phosphopantetheine attachment site KHS93_11335 PF14765 Polyketide synthase dehydratase KHS93_11340 PF00501 AMP-binding enzyme KHS93_11340 PF00668 Condensation domain KHS93_11340 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_11340 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_11340 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_11340 PF13193 AMP-binding enzyme C-terminal domain KHS93_11340 PF00550 Phosphopantetheine attachment site KHS93_11340 PF14765 Polyketide synthase dehydratase KHS93_11340 PF08659 KR domain KHS93_11345 PF14765 Polyketide synthase dehydratase KHS93_11345 PF00550 Phosphopantetheine attachment site KHS93_11345 PF08659 KR domain KHS93_11345 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_11345 PF08242 Methyltransferase domain KHS93_11345 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_11345 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_11350 PF13193 AMP-binding enzyme C-terminal domain KHS93_11350 PF14765 Polyketide synthase dehydratase KHS93_11350 PF00501 AMP-binding enzyme KHS93_11350 PF00668 Condensation domain KHS93_11350 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_11350 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_11350 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_11350 PF08659 KR domain KHS93_11350 PF00550 Phosphopantetheine attachment site KHS93_11355 PF00550 Phosphopantetheine attachment site KHS93_11355 PF08242 Methyltransferase domain KHS93_11355 PF08659 KR domain KHS93_11355 PF02801 Beta-ketoacyl synthase, C-terminal domain KHS93_11355 PF00109 Beta-ketoacyl synthase, N-terminal domain KHS93_11355 PF16197 Ketoacyl-synthetase C-terminal extension KHS93_11355 PF14765 Polyketide synthase dehydratase KHS93_11365 PF13193 AMP-binding enzyme C-terminal domain KHS93_11365 PF00501 AMP-binding enzyme KHS93_11380 PF03060 Nitronate monooxygenase KHS93_11380 PF00698 Acyl transferase domain KHS93_11385 PF02357 Transcription termination factor nusG KHS93_11385 PF00467 KOW motif KHS93_11390 PF03466 LysR substrate binding domain KHS93_11390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_11400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KHS93_11405 PF12146 Serine aminopeptidase, S33 KHS93_11410 PF00471 Ribosomal protein L33 KHS93_11415 PF12706 Beta-lactamase superfamily domain KHS93_11420 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KHS93_11420 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KHS93_11425 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KHS93_11425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KHS93_11430 PF00817 impB/mucB/samB family KHS93_11430 PF11799 impB/mucB/samB family C-terminal domain KHS93_11430 PF11798 IMS family HHH motif KHS93_11440 PF02096 60Kd inner membrane protein KHS93_11445 PF07687 Peptidase dimerisation domain KHS93_11445 PF01546 Peptidase family M20/M25/M40 KHS93_11450 PF01039 Carboxyl transferase domain KHS93_11465 PF03734 L,D-transpeptidase catalytic domain KHS93_11470 PF06081 Aromatic acid exporter family member 1 KHS93_11470 PF11728 Putative aromatic acid exporter C-terminal domain KHS93_11475 PF00005 ABC transporter KHS93_11480 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_11485 PF00497 Bacterial extracellular solute-binding proteins, family 3 KHS93_11490 PF06491 Disulphide isomerase KHS93_11495 PF00781 Diacylglycerol kinase catalytic domain KHS93_11500 PF00364 Biotin-requiring enzyme KHS93_11500 PF02817 e3 binding domain KHS93_11500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KHS93_11505 PF02779 Transketolase, pyrimidine binding domain KHS93_11505 PF02780 Transketolase, C-terminal domain KHS93_11510 PF00676 Dehydrogenase E1 component KHS93_11515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KHS93_11515 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHS93_11520 PF00871 Acetokinase family KHS93_11525 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KHS93_11525 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KHS93_11530 PF01515 Phosphate acetyl/butaryl transferase KHS93_11535 PF02954 Bacterial regulatory protein, Fis family KHS93_11535 PF00989 PAS fold KHS93_11535 PF00158 Sigma-54 interaction domain KHS93_11540 PF11118 Protein of unknown function (DUF2627) KHS93_11550 PF03972 MmgE/PrpD family KHS93_11555 PF00285 Citrate synthase, C-terminal domain KHS93_11560 PF02770 Acyl-CoA dehydrogenase, middle domain KHS93_11560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KHS93_11560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KHS93_11565 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KHS93_11565 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KHS93_11570 PF02803 Thiolase, C-terminal domain KHS93_11570 PF00108 Thiolase, N-terminal domain KHS93_11575 PF03009 Glycerophosphoryl diester phosphodiesterase family KHS93_11580 PF01520 N-acetylmuramoyl-L-alanine amidase KHS93_11605 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KHS93_11610 PF10676 Spore germination protein gerPA/gerPF KHS93_11615 PF10676 Spore germination protein gerPA/gerPF KHS93_11620 PF00842 Alanine racemase, C-terminal domain KHS93_11620 PF01168 Alanine racemase, N-terminal domain KHS93_11625 PF00072 Response regulator receiver domain KHS93_11625 PF08769 Sporulation initiation factor Spo0A C terminal KHS93_11630 PF05580 SpoIVB peptidase S55 KHS93_11630 PF17820 PDZ domain KHS93_11635 PF13476 AAA domain KHS93_11640 PF02863 Arginine repressor, C-terminal domain KHS93_11640 PF01316 Arginine repressor, DNA binding domain KHS93_11645 PF01479 S4 domain KHS93_11645 PF01728 FtsJ-like methyltransferase KHS93_11650 PF02780 Transketolase, C-terminal domain KHS93_11650 PF02779 Transketolase, pyrimidine binding domain KHS93_11650 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KHS93_11655 PF00348 Polyprenyl synthetase KHS93_11660 PF02609 Exonuclease VII small subunit KHS93_11665 PF13742 OB-fold nucleic acid binding domain KHS93_11665 PF02601 Exonuclease VII, large subunit KHS93_11670 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KHS93_11670 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KHS93_11675 PF01029 NusB family KHS93_11680 PF03780 Asp23 family, cell envelope-related function KHS93_11685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KHS93_11685 PF02785 Biotin carboxylase C-terminal domain KHS93_11685 PF00289 Biotin carboxylase, N-terminal domain KHS93_11690 PF00364 Biotin-requiring enzyme KHS93_11695 PF12685 SpoIIIAH-like protein KHS93_11705 PF09581 Stage III sporulation protein AF (Spore_III_AF) KHS93_11710 PF09546 Stage III sporulation protein AE (spore_III_AE) KHS93_11715 PF06686 Stage III sporulation protein AC/AD protein family KHS93_11720 PF06686 Stage III sporulation protein AC/AD protein family KHS93_11725 PF09548 Stage III sporulation protein AB (spore_III_AB) KHS93_11735 PF10942 Protein of unknown function (DUF2619) KHS93_11740 PF08207 Elongation factor P (EF-P) KOW-like domain KHS93_11740 PF09285 Elongation factor P, C-terminal KHS93_11740 PF01132 Elongation factor P (EF-P) OB domain KHS93_11745 PF01321 Creatinase/Prolidase N-terminal domain KHS93_11745 PF00557 Metallopeptidase family M24 KHS93_11750 PF11085 Conserved membrane protein YqhR KHS93_11755 PF07136 Protein of unknown function (DUF1385) KHS93_11765 PF01734 Patatin-like phospholipase KHS93_11770 PF02742 Iron dependent repressor, metal binding and dimerisation domain KHS93_11770 PF01325 Iron dependent repressor, N-terminal DNA binding domain KHS93_11775 PF03099 Biotin/lipoate A/B protein ligase family KHS93_11780 PF00581 Rhodanese-like domain KHS93_11785 PF02347 Glycine cleavage system P-protein KHS93_11790 PF02347 Glycine cleavage system P-protein KHS93_11795 PF01571 Aminomethyltransferase folate-binding domain KHS93_11795 PF08669 Glycine cleavage T-protein C-terminal barrel domain KHS93_11800 PF00271 Helicase conserved C-terminal domain KHS93_11800 PF00176 SNF2 family N-terminal domain KHS93_11805 PF11079 Bacterial protein YqhG of unknown function KHS93_11810 PF08671 Anti-repressor SinI KHS93_11815 PF01381 Helix-turn-helix KHS93_11815 PF08671 Anti-repressor SinI KHS93_11820 PF12389 Camelysin metallo-endopeptidase KHS93_11835 PF13028 Protein of unknown function (DUF3889) KHS93_11840 PF14038 YqzE-like protein KHS93_11845 PF14173 ComG operon protein 7 KHS93_11850 PF15980 Putative Competence protein ComGF KHS93_11860 PF07963 Prokaryotic N-terminal methylation motif KHS93_11865 PF07963 Prokaryotic N-terminal methylation motif KHS93_11870 PF00482 Type II secretion system (T2SS), protein F KHS93_11875 PF00437 Type II/IV secretion system protein KHS93_11880 PF01544 CorA-like Mg2+ transporter protein KHS93_11885 PF00571 CBS domain KHS93_11885 PF03471 Transporter associated domain KHS93_11885 PF01595 Cyclin M transmembrane N-terminal domain KHS93_11890 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain KHS93_11890 PF01740 STAS domain KHS93_11900 PF03960 ArsC family KHS93_11905 PF11117 Protein of unknown function (DUF2626) KHS93_11910 PF00753 Metallo-beta-lactamase superfamily KHS93_11915 PF10958 Protein of unknown function (DUF2759) KHS93_11920 PF01910 Thiamine-binding protein KHS93_11930 PF00246 Zinc carboxypeptidase KHS93_11935 PF00480 ROK family KHS93_11940 PF06014 Bacterial protein of unknown function (DUF910) KHS93_11945 PF03553 Na+/H+ antiporter family KHS93_11955 PF01812 5-formyltetrahydrofolate cyclo-ligase family KHS93_11960 PF00471 Ribosomal protein L33 KHS93_11975 PF00005 ABC transporter KHS93_11980 PF00005 ABC transporter KHS93_11985 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_11990 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_11995 PF12849 PBP superfamily domain KHS93_12000 PF03717 Penicillin-binding Protein dimerisation domain KHS93_12000 PF00905 Penicillin binding protein transpeptidase domain KHS93_12005 PF07690 Major Facilitator Superfamily KHS93_12010 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KHS93_12010 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KHS93_12015 PF04306 Protein of unknown function (DUF456) KHS93_12020 PF06691 Protein of unknown function (DUF1189) KHS93_12030 PF04551 GcpE protein KHS93_12045 PF01475 Ferric uptake regulator family KHS93_12050 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHS93_12050 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHS93_12055 PF11116 Protein of unknown function (DUF2624) KHS93_12060 PF01261 Xylose isomerase-like TIM barrel KHS93_12065 PF00270 DEAD/DEAH box helicase KHS93_12065 PF00271 Helicase conserved C-terminal domain KHS93_12070 PF14181 YqfQ-like protein KHS93_12075 PF02401 LytB protein KHS93_12080 PF01784 NIF3 (NGG1p interacting factor 3) KHS93_12085 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KHS93_12090 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KHS93_12095 PF00140 Sigma-70 factor, region 1.2 KHS93_12095 PF03979 Sigma-70 factor, region 1.1 KHS93_12095 PF04542 Sigma-70 region 2 KHS93_12095 PF04545 Sigma-70, region 4 KHS93_12095 PF04539 Sigma-70 region 3 KHS93_12100 PF10410 DnaB-helicase binding domain of primase KHS93_12100 PF08275 DNA primase catalytic core, N-terminal domain KHS93_12100 PF01807 CHC2 zinc finger KHS93_12105 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KHS93_12110 PF03618 Kinase/pyrophosphorylase KHS93_12115 PF00571 CBS domain KHS93_12115 PF08279 HTH domain KHS93_12120 PF02092 Glycyl-tRNA synthetase beta subunit KHS93_12125 PF02091 Glycyl-tRNA synthetase alpha subunit KHS93_12130 PF02565 Recombination protein O C terminal KHS93_12130 PF11967 Recombination protein O N terminal KHS93_12135 PF14006 YqzL-like protein KHS93_12140 PF01926 50S ribosome-binding GTPase KHS93_12140 PF07650 KH domain KHS93_12145 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KHS93_12150 PF01219 Prokaryotic diacylglycerol kinase KHS93_12155 PF02130 Uncharacterized protein family UPF0054 KHS93_12160 PF07698 7TM receptor with intracellular HD hydrolase KHS93_12160 PF07697 7TM-HD extracellular KHS93_12160 PF01966 HD domain KHS93_12165 PF02562 PhoH-like protein KHS93_12170 PF06898 Putative stage IV sporulation protein YqfD KHS93_12175 PF07873 YabP family KHS93_12185 PF12127 SigmaW regulon antibacterial KHS93_12190 PF01957 NfeD-like C-terminal, partner-binding KHS93_12190 PF01972 Serine dehydrogenase proteinase KHS93_12195 PF09424 Yqey-like protein KHS93_12200 PF01165 Ribosomal protein S21 KHS93_12205 PF02690 Na+/Pi-cotransporter KHS93_12210 PF04055 Radical SAM superfamily KHS93_12210 PF01938 TRAM domain KHS93_12210 PF00919 Uncharacterized protein family UPF0004 KHS93_12215 PF04452 RNA methyltransferase KHS93_12225 PF00226 DnaJ domain KHS93_12225 PF01556 DnaJ C terminal domain KHS93_12225 PF00684 DnaJ central domain KHS93_12230 PF00012 Hsp70 protein KHS93_12235 PF01025 GrpE KHS93_12240 PF01628 HrcA protein C terminal domain KHS93_12245 PF04055 Radical SAM superfamily KHS93_12245 PF06969 HemN C-terminal domain KHS93_12250 PF00679 Elongation factor G C-terminus KHS93_12250 PF00009 Elongation factor Tu GTP binding domain KHS93_12250 PF03144 Elongation factor Tu domain 2 KHS93_12250 PF06421 GTP-binding protein LepA C-terminus KHS93_12255 PF12438 Protein of unknown function (DUF3679) KHS93_12260 PF07454 Stage II sporulation protein P (SpoIIP) KHS93_12265 PF03418 Germination protease KHS93_12270 PF01649 Ribosomal protein S20 KHS93_12275 PF06144 DNA polymerase III, delta subunit KHS93_12285 PF14141 YqzM-like protein KHS93_12290 PF00753 Metallo-beta-lactamase superfamily KHS93_12290 PF03772 Competence protein KHS93_12290 PF13567 Domain of unknown function (DUF4131) KHS93_12295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KHS93_12300 PF10531 SLBB domain KHS93_12305 PF03807 NADP oxidoreductase coenzyme F420-dependent KHS93_12305 PF14748 Pyrroline-5-carboxylate reductase dimerisation KHS93_12310 PF13649 Methyltransferase domain KHS93_12320 PF01966 HD domain KHS93_12325 PF01467 Cytidylyltransferase-like KHS93_12330 PF01985 CRS1 / YhbY (CRM) domain KHS93_12335 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KHS93_12335 PF01488 Shikimate / quinate 5-dehydrogenase KHS93_12335 PF08501 Shikimate dehydrogenase substrate binding domain KHS93_12340 PF01926 50S ribosome-binding GTPase KHS93_12350 PF08970 Sporulation inhibitor A KHS93_12355 PF00657 GDSL-like Lipase/Acylhydrolase KHS93_12360 PF01522 Polysaccharide deacetylase KHS93_12365 PF09335 SNARE associated Golgi protein KHS93_12375 PF04542 Sigma-70 region 2 KHS93_12375 PF04545 Sigma-70, region 4 KHS93_12390 PF06445 GyrI-like small molecule binding domain KHS93_12390 PF12833 Helix-turn-helix domain KHS93_12400 PF07690 Major Facilitator Superfamily KHS93_12405 PF08050 Tetracycline resistance leader peptide KHS93_12410 PF00583 Acetyltransferase (GNAT) family KHS93_12415 PF05163 DinB family KHS93_12435 PF01380 SIS domain KHS93_12435 PF01418 Helix-turn-helix domain, rpiR family KHS93_12440 PF01238 Phosphomannose isomerase type I KHS93_12445 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KHS93_12445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KHS93_12445 PF02378 Phosphotransferase system, EIIC KHS93_12450 PF08279 HTH domain KHS93_12450 PF05043 Mga helix-turn-helix domain KHS93_12450 PF00874 PRD domain KHS93_12450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KHS93_12455 PF12706 Beta-lactamase superfamily domain KHS93_12460 PF04073 Aminoacyl-tRNA editing domain KHS93_12465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_12465 PF03466 LysR substrate binding domain KHS93_12470 PF07690 Major Facilitator Superfamily KHS93_12475 PF00667 FAD binding domain KHS93_12475 PF00258 Flavodoxin KHS93_12475 PF00175 Oxidoreductase NAD-binding domain KHS93_12475 PF00067 Cytochrome P450 KHS93_12480 PF16295 Tetracyclin repressor-like, C-terminal domain KHS93_12480 PF00440 Bacterial regulatory proteins, tetR family KHS93_12485 PF08241 Methyltransferase domain KHS93_12495 PF09501 Probable sporulation protein (Bac_small_yrzI) KHS93_12500 PF01226 Formate/nitrite transporter KHS93_12505 PF10057 Uncharacterized conserved protein (DUF2294) KHS93_12510 PF00384 Molybdopterin oxidoreductase KHS93_12510 PF01568 Molydopterin dinucleotide binding domain KHS93_12510 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KHS93_12510 PF00037 4Fe-4S binding domain KHS93_12510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KHS93_12515 PF07849 Protein of unknown function (DUF1641) KHS93_12520 PF14143 YrhC-like protein KHS93_12525 PF01053 Cys/Met metabolism PLP-dependent enzyme KHS93_12530 PF00291 Pyridoxal-phosphate dependent enzyme KHS93_12535 PF01048 Phosphorylase superfamily KHS93_12540 PF13649 Methyltransferase domain KHS93_12545 PF10750 Protein of unknown function (DUF2536) KHS93_12550 PF07423 Domain of unknown function (DUF1510) KHS93_12555 PF00905 Penicillin binding protein transpeptidase domain KHS93_12555 PF03717 Penicillin-binding Protein dimerisation domain KHS93_12560 PF01272 Transcription elongation factor, GreA/GreB, C-term KHS93_12560 PF03449 Transcription elongation factor, N-terminal KHS93_12565 PF00485 Phosphoribulokinase / Uridine kinase family KHS93_12570 PF01136 Peptidase family U32 KHS93_12570 PF16325 Peptidase family U32 C-terminal domain KHS93_12575 PF01136 Peptidase family U32 KHS93_12580 PF01596 O-methyltransferase KHS93_12585 PF02618 YceG-like family KHS93_12590 PF06949 Protein of unknown function (DUF1292) KHS93_12595 PF03652 Holliday junction resolvase KHS93_12600 PF06135 IreB regulatory phosphoprotein KHS93_12605 PF01411 tRNA synthetases class II (A) KHS93_12605 PF02272 DHHA1 domain KHS93_12605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KHS93_12610 PF01594 AI-2E family transporter KHS93_12615 PF00005 ABC transporter KHS93_12620 PF00497 Bacterial extracellular solute-binding proteins, family 3 KHS93_12625 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_12630 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_12635 PF13056 Protein of unknown function (DUF3918) KHS93_12645 PF05239 PRC-barrel domain KHS93_12650 PF13538 UvrD-like helicase C-terminal domain KHS93_12650 PF14490 Helix-hairpin-helix containing domain KHS93_12650 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KHS93_12655 PF07719 Tetratricopeptide repeat KHS93_12655 PF13181 Tetratricopeptide repeat KHS93_12665 PF00266 Aminotransferase class-V KHS93_12670 PF02082 Transcriptional regulator KHS93_12675 PF16193 AAA C-terminal domain KHS93_12675 PF12002 MgsA AAA+ ATPase C terminal KHS93_12675 PF05496 Holliday junction DNA helicase RuvB P-loop domain KHS93_12680 PF00899 ThiF family KHS93_12690 PF01336 OB-fold nucleic acid binding domain KHS93_12690 PF02938 GAD domain KHS93_12690 PF00152 tRNA synthetases class II (D, K and N) KHS93_12695 PF03129 Anticodon binding domain KHS93_12695 PF13393 Histidyl-tRNA synthetase KHS93_12700 PF17449 Uncharacterized YrzK-like KHS93_12705 PF08239 Bacterial SH3 domain KHS93_12705 PF01520 N-acetylmuramoyl-L-alanine amidase KHS93_12710 PF02580 D-Tyr-tRNA(Tyr) deacylase KHS93_12715 PF13291 ACT domain KHS93_12715 PF04607 Region found in RelA / SpoT proteins KHS93_12715 PF02824 TGS domain KHS93_12720 PF00156 Phosphoribosyl transferase domain KHS93_12725 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KHS93_12725 PF02272 DHHA1 domain KHS93_12725 PF01368 DHH family KHS93_12725 PF17768 RecJ OB domain KHS93_12730 PF06305 Lipopolysaccharide assembly protein A domain KHS93_12735 PF02080 TrkA-C domain KHS93_12740 PF07549 SecD/SecF GG Motif KHS93_12740 PF02355 Protein export membrane protein KHS93_12745 PF13797 Post-transcriptional regulator KHS93_12750 PF01943 Polysaccharide biosynthesis protein KHS93_12750 PF14667 Polysaccharide biosynthesis C-terminal domain KHS93_12755 PF04239 Protein of unknown function (DUF421) KHS93_12760 PF12670 Protein of unknown function (DUF3792) KHS93_12765 PF02699 Preprotein translocase subunit KHS93_12770 PF01702 Queuine tRNA-ribosyltransferase KHS93_12775 PF02547 Queuosine biosynthesis protein KHS93_12780 PF11146 Protein of unknown function (DUF2905) KHS93_12785 PF17864 RuvB AAA lid domain KHS93_12785 PF05491 RuvB C-terminal winged helix domain KHS93_12785 PF05496 Holliday junction DNA helicase RuvB P-loop domain KHS93_12790 PF07499 RuvA, C-terminal domain KHS93_12790 PF01330 RuvA N terminal domain KHS93_12795 PF08955 BofC C-terminal domain KHS93_12795 PF08977 Bypass of Forespore C, N terminal KHS93_12805 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KHS93_12810 PF01476 LysM domain KHS93_12815 PF02445 Quinolinate synthetase A protein KHS93_12820 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KHS93_12820 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KHS93_12825 PF00890 FAD binding domain KHS93_12825 PF02910 Fumarate reductase flavoprotein C-term KHS93_12830 PF00266 Aminotransferase class-V KHS93_12835 PF02829 3H domain KHS93_12835 PF08279 HTH domain KHS93_12840 PF01842 ACT domain KHS93_12840 PF00800 Prephenate dehydratase KHS93_12845 PF01842 ACT domain KHS93_12850 PF09269 Domain of unknown function (DUF1967) KHS93_12850 PF01926 50S ribosome-binding GTPase KHS93_12850 PF01018 GTP1/OBG KHS93_12855 PF14682 Sporulation initiation phospho-transferase B, C-terminal KHS93_12855 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KHS93_12860 PF01016 Ribosomal L27 protein KHS93_12865 PF04327 Cysteine protease Prp KHS93_12870 PF00829 Ribosomal prokaryotic L21 protein KHS93_12875 PF02163 Peptidase family M50 KHS93_12880 PF01551 Peptidase family M23 KHS93_12885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KHS93_12890 PF03775 Septum formation inhibitor MinC, C-terminal domain KHS93_12895 PF04093 rod shape-determining protein MreD KHS93_12900 PF04085 rod shape-determining protein MreC KHS93_12910 PF04002 RadC-like JAB domain KHS93_12915 PF02545 Maf-like protein KHS93_12920 PF05036 Sporulation related domain KHS93_12925 PF06750 Bacterial Peptidase A24 N-terminal domain KHS93_12925 PF01478 Type IV leader peptidase family KHS93_12930 PF02875 Mur ligase family, glutamate ligase domain KHS93_12930 PF08245 Mur ligase middle domain KHS93_12935 PF08264 Anticodon-binding domain of tRNA KHS93_12935 PF00133 tRNA synthetases class I (I, L, M and V) KHS93_12935 PF10458 Valyl tRNA synthetase tRNA binding arm KHS93_12950 PF01476 LysM domain KHS93_12955 PF00202 Aminotransferase class-III KHS93_12960 PF00490 Delta-aminolevulinic acid dehydratase KHS93_12965 PF02602 Uroporphyrinogen-III synthase HemD KHS93_12970 PF03900 Porphobilinogen deaminase, C-terminal domain KHS93_12970 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KHS93_12975 PF01578 Cytochrome C assembly protein KHS93_12980 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KHS93_12980 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KHS93_12980 PF01488 Shikimate / quinate 5-dehydrogenase KHS93_12990 PF01926 50S ribosome-binding GTPase KHS93_12995 PF00004 ATPase family associated with various cellular activities (AAA) KHS93_12995 PF05362 Lon protease (S16) C-terminal proteolytic domain KHS93_12995 PF02190 ATP-dependent protease La (LON) substrate-binding domain KHS93_13000 PF00004 ATPase family associated with various cellular activities (AAA) KHS93_13000 PF05362 Lon protease (S16) C-terminal proteolytic domain KHS93_13005 PF07724 AAA domain (Cdc48 subfamily) KHS93_13005 PF10431 C-terminal, D2-small domain, of ClpB protein KHS93_13005 PF06689 ClpX C4-type zinc finger KHS93_13010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KHS93_13010 PF05698 Bacterial trigger factor protein (TF) C-terminus KHS93_13010 PF05697 Bacterial trigger factor protein (TF) KHS93_13020 PF00694 Aconitase C-terminal domain KHS93_13025 PF00330 Aconitase family (aconitate hydratase) KHS93_13030 PF00180 Isocitrate/isopropylmalate dehydrogenase KHS93_13035 PF00682 HMGL-like KHS93_13035 PF08502 LeuA allosteric (dimerisation) domain KHS93_13040 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KHS93_13040 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KHS93_13045 PF01842 ACT domain KHS93_13045 PF10369 Small subunit of acetolactate synthase KHS93_13050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KHS93_13050 PF00205 Thiamine pyrophosphate enzyme, central domain KHS93_13050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KHS93_13070 PF01420 Type I restriction modification DNA specificity domain KHS93_13075 PF02384 N-6 DNA Methylase KHS93_13080 PF08463 EcoEI R protein C-terminal KHS93_13080 PF00271 Helicase conserved C-terminal domain KHS93_13080 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KHS93_13080 PF04851 Type III restriction enzyme, res subunit KHS93_13100 PF12850 Calcineurin-like phosphoesterase superfamily domain KHS93_13105 PF01725 Ham1 family KHS93_13110 PF01138 3' exoribonuclease family, domain 1 KHS93_13110 PF03725 3' exoribonuclease family, domain 2 KHS93_13115 PF10646 Sporulation and spore germination KHS93_13120 PF01177 Asp/Glu/Hydantoin racemase KHS93_13125 PF01047 MarR family KHS93_13130 PF00196 Bacterial regulatory proteins, luxR family KHS93_13135 PF03061 Thioesterase superfamily KHS93_13140 PF13085 2Fe-2S iron-sulfur cluster binding domain KHS93_13140 PF13183 4Fe-4S dicluster domain KHS93_13145 PF00890 FAD binding domain KHS93_13145 PF02910 Fumarate reductase flavoprotein C-term KHS93_13150 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KHS93_13155 PF10702 Protein of unknown function (DUF2507) KHS93_13160 PF00696 Amino acid kinase family KHS93_13160 PF01842 ACT domain KHS93_13160 PF13840 ACT domain KHS93_13165 PF01541 GIY-YIG catalytic domain KHS93_13165 PF02151 UvrB/uvrC motif KHS93_13165 PF08459 UvrC Helix-hairpin-helix N-terminal KHS93_13170 PF00085 Thioredoxin KHS93_13175 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KHS93_13180 PF01012 Electron transfer flavoprotein domain KHS93_13180 PF00766 Electron transfer flavoprotein FAD-binding domain KHS93_13185 PF01012 Electron transfer flavoprotein domain KHS93_13190 PF00378 Enoyl-CoA hydratase/isomerase KHS93_13195 PF00440 Bacterial regulatory proteins, tetR family KHS93_13195 PF08359 YsiA-like protein, C-terminal region KHS93_13200 PF00501 AMP-binding enzyme KHS93_13200 PF13193 AMP-binding enzyme C-terminal domain KHS93_13210 PF03994 Domain of Unknown Function (DUF350) KHS93_13215 PF00488 MutS domain V KHS93_13215 PF01713 Smr domain KHS93_13220 PF14791 DNA polymerase beta thumb KHS93_13220 PF14716 Helix-hairpin-helix domain KHS93_13220 PF02811 PHP domain KHS93_13225 PF02674 Colicin V production protein KHS93_13230 PF05164 Cell division protein ZapA KHS93_13235 PF01351 Ribonuclease HII KHS93_13235 PF11858 Domain of unknown function (DUF3378) KHS93_13240 PF03484 tRNA synthetase B5 domain KHS93_13240 PF03483 B3/4 domain KHS93_13240 PF03147 Ferredoxin-fold anticodon binding domain KHS93_13240 PF01588 Putative tRNA binding domain KHS93_13240 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KHS93_13245 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KHS93_13245 PF01409 tRNA synthetases class II core domain (F) KHS93_13250 PF00588 SpoU rRNA Methylase family KHS93_13250 PF08032 RNA 2'-O ribose methyltransferase substrate binding KHS93_13255 PF14098 Small, acid-soluble spore protein I KHS93_13260 PF13556 PucR C-terminal helix-turn-helix domain KHS93_13260 PF05651 Putative sugar diacid recognition KHS93_13260 PF17853 GGDEF-like domain KHS93_13265 PF02913 FAD linked oxidases, C-terminal domain KHS93_13265 PF01565 FAD binding domain KHS93_13270 PF02754 Cysteine-rich domain KHS93_13270 PF13183 4Fe-4S dicluster domain KHS93_13275 PF02554 Carbon starvation protein CstA KHS93_13275 PF13722 5TM C-terminal transporter carbon starvation CstA KHS93_13280 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KHS93_13285 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_13290 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_13295 PF01547 Bacterial extracellular solute-binding protein KHS93_13300 PF13685 Iron-containing alcohol dehydrogenase KHS93_13305 PF13344 Haloacid dehalogenase-like hydrolase KHS93_13310 PF00596 Class II Aldolase and Adducin N-terminal domain KHS93_13315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KHS93_13315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KHS93_13320 PF11762 L-arabinose isomerase C-terminal domain KHS93_13320 PF02610 L-arabinose isomerase KHS93_13325 PF04616 Glycosyl hydrolases family 43 KHS93_13330 PF05343 M42 glutamyl aminopeptidase KHS93_13340 PF06961 Protein of unknown function (DUF1294) KHS93_13345 PF00453 Ribosomal protein L20 KHS93_13350 PF01632 Ribosomal protein L35 KHS93_13355 PF00707 Translation initiation factor IF-3, C-terminal domain KHS93_13355 PF05198 Translation initiation factor IF-3, N-terminal domain KHS93_13360 PF04172 LrgB-like family KHS93_13365 PF03788 LrgA family KHS93_13370 PF04397 LytTr DNA-binding domain KHS93_13370 PF00072 Response regulator receiver domain KHS93_13375 PF06580 Histidine kinase KHS93_13375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_13375 PF07694 5TMR of 5TMR-LYT KHS93_13380 PF13419 Haloacid dehalogenase-like hydrolase KHS93_13385 PF02824 TGS domain KHS93_13385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KHS93_13385 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KHS93_13385 PF03129 Anticodon binding domain KHS93_13390 PF08812 YtxC-like family KHS93_13395 PF09335 SNARE associated Golgi protein KHS93_13400 PF07319 Primosomal protein DnaI N-terminus KHS93_13400 PF01695 IstB-like ATP binding protein KHS93_13405 PF07261 Replication initiation and membrane attachment KHS93_13410 PF03477 ATP cone domain KHS93_13415 PF02675 S-adenosylmethionine decarboxylase KHS93_13420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KHS93_13420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KHS93_13425 PF01638 HxlR-like helix-turn-helix KHS93_13430 PF07690 Major Facilitator Superfamily KHS93_13435 PF00248 Aldo/keto reductase family KHS93_13440 PF01121 Dephospho-CoA kinase KHS93_13445 PF02659 Putative manganese efflux pump KHS93_13450 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KHS93_13450 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KHS93_13450 PF06827 Zinc finger found in FPG and IleRS KHS93_13455 PF00476 DNA polymerase family A KHS93_13455 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KHS93_13455 PF01367 5'-3' exonuclease, C-terminal SAM fold KHS93_13460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_13460 PF00512 His Kinase A (phospho-acceptor) domain KHS93_13460 PF00989 PAS fold KHS93_13460 PF16736 Single Cache-like KHS93_13465 PF00072 Response regulator receiver domain KHS93_13465 PF00486 Transcriptional regulatory protein, C terminal KHS93_13470 PF00056 lactate/malate dehydrogenase, NAD binding domain KHS93_13470 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KHS93_13475 PF00180 Isocitrate/isopropylmalate dehydrogenase KHS93_13480 PF00285 Citrate synthase, C-terminal domain KHS93_13485 PF11208 Protein of unknown function (DUF2992) KHS93_13495 PF04284 Protein of unknown function (DUF441) KHS93_13500 PF01594 AI-2E family transporter KHS93_13505 PF04186 FxsA cytoplasmic membrane protein KHS93_13510 PF00224 Pyruvate kinase, barrel domain KHS93_13510 PF00391 PEP-utilising enzyme, mobile domain KHS93_13510 PF02887 Pyruvate kinase, alpha/beta domain KHS93_13515 PF00365 Phosphofructokinase KHS93_13520 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KHS93_13525 PF01039 Carboxyl transferase domain KHS93_13525 PF17848 Acetyl-coA carboxylase zinc finger domain KHS93_13530 PF00390 Malic enzyme, N-terminal domain KHS93_13530 PF03949 Malic enzyme, NAD binding domain KHS93_13535 PF02811 PHP domain KHS93_13535 PF07733 Bacterial DNA polymerase III alpha NTPase domain KHS93_13535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KHS93_13535 PF14579 Helix-hairpin-helix motif KHS93_13535 PF01336 OB-fold nucleic acid binding domain KHS93_13540 PF14034 Sporulation protein YtrH KHS93_13555 PF01368 DHH family KHS93_13555 PF02272 DHHA1 domain KHS93_13560 PF14007 YtpI-like protein KHS93_13565 PF00392 Bacterial regulatory proteins, gntR family KHS93_13565 PF00571 CBS domain KHS93_13565 PF07085 DRTGG domain KHS93_13565 PF03061 Thioesterase superfamily KHS93_13580 PF14698 Argininosuccinate lyase C-terminal KHS93_13580 PF00206 Lyase KHS93_13585 PF00764 Arginosuccinate synthase KHS93_13590 PF00994 Probable molybdopterin binding domain KHS93_13595 PF00871 Acetokinase family KHS93_13600 PF02384 N-6 DNA Methylase KHS93_13605 PF08534 Redoxin KHS93_13610 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KHS93_13615 PF11167 Protein of unknown function (DUF2953) KHS93_13620 PF06271 RDD family KHS93_13625 PF01343 Peptidase family S49 KHS93_13630 PF01513 ATP-NAD kinase KHS93_13635 PF07969 Amidohydrolase family KHS93_13640 PF13193 AMP-binding enzyme C-terminal domain KHS93_13640 PF00501 AMP-binding enzyme KHS93_13645 PF00269 Small, acid-soluble spore proteins, alpha/beta type KHS93_13650 PF02568 Thiamine biosynthesis protein (ThiI) KHS93_13650 PF02926 THUMP domain KHS93_13655 PF00266 Aminotransferase class-V KHS93_13660 PF05525 Branched-chain amino acid transport protein KHS93_13665 PF06160 Septation ring formation regulator, EzrA KHS93_13670 PF02811 PHP domain KHS93_13675 PF00440 Bacterial regulatory proteins, tetR family KHS93_13680 PF13185 GAF domain KHS93_13685 PF00990 Diguanylate cyclase, GGDEF domain KHS93_13690 PF00163 Ribosomal protein S4/S9 N-terminal domain KHS93_13690 PF01479 S4 domain KHS93_13695 PF00171 Aldehyde dehydrogenase family KHS93_13700 PF09346 SMI1 / KNR4 family (SUKH-1) KHS93_13735 PF00970 Oxidoreductase FAD-binding domain KHS93_13735 PF00042 Globin KHS93_13735 PF00175 Oxidoreductase NAD-binding domain KHS93_13760 PF16916 Dimerisation domain of Zinc Transporter KHS93_13760 PF01545 Cation efflux family KHS93_13765 PF01978 Sugar-specific transcriptional regulator TrmB KHS93_13765 PF11495 Archaeal transcriptional regulator TrmB KHS93_13780 PF00579 tRNA synthetases class I (W and Y) KHS93_13780 PF01479 S4 domain KHS93_13785 PF13193 AMP-binding enzyme C-terminal domain KHS93_13785 PF00501 AMP-binding enzyme KHS93_13790 PF00583 Acetyltransferase (GNAT) family KHS93_13795 PF00571 CBS domain KHS93_13800 PF00850 Histone deacetylase domain KHS93_13805 PF13677 Membrane MotB of proton-channel complex MotA/MotB KHS93_13805 PF00691 OmpA family KHS93_13810 PF01618 MotA/TolQ/ExbB proton channel family KHS93_13815 PF00356 Bacterial regulatory proteins, lacI family KHS93_13820 PF01817 Chorismate mutase type II KHS93_13820 PF00793 DAHP synthetase I family KHS93_13825 PF11009 Protein of unknown function (DUF2847) KHS93_13830 PF12732 YtxH-like protein KHS93_13835 PF06103 Bacterial protein of unknown function (DUF948) KHS93_13840 PF08245 Mur ligase middle domain KHS93_13840 PF01225 Mur ligase family, catalytic domain KHS93_13840 PF02875 Mur ligase family, glutamate ligase domain KHS93_13845 PF17854 FtsK alpha domain KHS93_13845 PF09397 Ftsk gamma domain KHS93_13845 PF01580 FtsK/SpoIIIE family KHS93_13850 PF14794 Domain of unknown function (DUF4479) KHS93_13850 PF01588 Putative tRNA binding domain KHS93_13855 PF07285 Protein of unknown function (DUF1444) KHS93_13860 PF00085 Thioredoxin KHS93_13865 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ KHS93_13870 PF05343 M42 glutamyl aminopeptidase KHS93_13875 PF03413 Peptidase propeptide and YPEB domain KHS93_13880 PF03949 Malic enzyme, NAD binding domain KHS93_13880 PF00390 Malic enzyme, N-terminal domain KHS93_13885 PF00753 Metallo-beta-lactamase superfamily KHS93_13890 PF02390 Putative methyltransferase KHS93_13895 PF14165 YtzH-like protein KHS93_13900 PF01636 Phosphotransferase enzyme family KHS93_13905 PF00781 Diacylglycerol kinase catalytic domain KHS93_13920 PF00291 Pyridoxal-phosphate dependent enzyme KHS93_13925 PF01546 Peptidase family M20/M25/M40 KHS93_13930 PF00860 Permease family KHS93_13935 PF05975 Bacterial ABC transporter protein EcsB KHS93_13940 PF00005 ABC transporter KHS93_13945 PF08220 DeoR-like helix-turn-helix domain KHS93_13950 PF00849 RNA pseudouridylate synthase KHS93_13950 PF01479 S4 domain KHS93_13955 PF01943 Polysaccharide biosynthesis protein KHS93_13955 PF14667 Polysaccharide biosynthesis C-terminal domain KHS93_13965 PF02028 BCCT, betaine/carnitine/choline family transporter KHS93_13970 PF10957 Sporulation protein Cse60 KHS93_13975 PF00356 Bacterial regulatory proteins, lacI family KHS93_13980 PF01547 Bacterial extracellular solute-binding protein KHS93_13985 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_13990 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_13995 PF02056 Family 4 glycosyl hydrolase KHS93_13995 PF11975 Family 4 glycosyl hydrolase C-terminal domain KHS93_14005 PF00581 Rhodanese-like domain KHS93_14010 PF08264 Anticodon-binding domain of tRNA KHS93_14010 PF00133 tRNA synthetases class I (I, L, M and V) KHS93_14010 PF13603 Leucyl-tRNA synthetase, Domain 2 KHS93_14010 PF09334 tRNA synthetases class I (M) KHS93_14015 PF14074 Protein of unknown function (DUF4257) KHS93_14020 PF13426 PAS domain KHS93_14020 PF01740 STAS domain KHS93_14025 PF07690 Major Facilitator Superfamily KHS93_14030 PF09529 Integral membrane protein (intg_mem_TP0381) KHS93_14035 PF02687 FtsX-like permease family KHS93_14040 PF00005 ABC transporter KHS93_14045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_14050 PF00486 Transcriptional regulatory protein, C terminal KHS93_14050 PF00072 Response regulator receiver domain KHS93_14055 PF12704 MacB-like periplasmic core domain KHS93_14055 PF02687 FtsX-like permease family KHS93_14060 PF00005 ABC transporter KHS93_14080 PF00005 ABC transporter KHS93_14085 PF00392 Bacterial regulatory proteins, gntR family KHS93_14090 PF10732 Protein of unknown function (DUF2524) KHS93_14095 PF01022 Bacterial regulatory protein, arsR family KHS93_14100 PF07690 Major Facilitator Superfamily KHS93_14105 PF04055 Radical SAM superfamily KHS93_14105 PF16199 Radical_SAM C-terminal domain KHS93_14110 PF06962 Putative rRNA methylase KHS93_14120 PF03009 Glycerophosphoryl diester phosphodiesterase family KHS93_14125 PF10776 Protein of unknown function (DUF2600) KHS93_14130 PF12146 Serine aminopeptidase, S33 KHS93_14135 PF00132 Bacterial transferase hexapeptide (six repeats) KHS93_14140 PF00324 Amino acid permease KHS93_14145 PF00733 Asparagine synthase KHS93_14145 PF13537 Glutamine amidotransferase domain KHS93_14150 PF02773 S-adenosylmethionine synthetase, C-terminal domain KHS93_14150 PF02772 S-adenosylmethionine synthetase, central domain KHS93_14150 PF00438 S-adenosylmethionine synthetase, N-terminal domain KHS93_14155 PF01293 Phosphoenolpyruvate carboxykinase KHS93_14160 PF10763 Protein of unknown function (DUF2584) KHS93_14165 PF00326 Prolyl oligopeptidase family KHS93_14175 PF00005 ABC transporter KHS93_14180 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_14185 PF00293 NUDIX domain KHS93_14190 PF05105 Bacteriophage holin family KHS93_14195 PF00210 Ferritin-like domain KHS93_14205 PF13115 YtkA-like KHS93_14210 PF02664 S-Ribosylhomocysteinase (LuxS) KHS93_14215 PF01809 Putative membrane protein insertion efficiency factor KHS93_14220 PF00484 Carbonic anhydrase KHS93_14225 PF01197 Ribosomal protein L31 KHS93_14230 PF01654 Cytochrome bd terminal oxidase subunit I KHS93_14235 PF02322 Cytochrome bd terminal oxidase subunit II KHS93_14240 PF07561 Domain of Unknown Function (DUF1540) KHS93_14245 PF13378 Enolase C-terminal domain-like KHS93_14245 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KHS93_14250 PF00501 AMP-binding enzyme KHS93_14250 PF13193 AMP-binding enzyme C-terminal domain KHS93_14255 PF00378 Enoyl-CoA hydratase/isomerase KHS93_14260 PF00561 alpha/beta hydrolase fold KHS93_14265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KHS93_14265 PF16582 Middle domain of thiamine pyrophosphate KHS93_14265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KHS93_14270 PF00425 chorismate binding enzyme KHS93_14275 PF01258 Prokaryotic dksA/traR C4-type zinc finger KHS93_14280 PF03073 TspO/MBR family KHS93_14405 PF09515 Thiamine transporter protein (Thia_YuaJ) KHS93_14410 PF01145 SPFH domain / Band 7 family KHS93_14410 PF15975 Flotillin KHS93_14420 PF12867 DinB superfamily KHS93_14430 PF00465 Iron-containing alcohol dehydrogenase KHS93_14435 PF00171 Aldehyde dehydrogenase family KHS93_14445 PF17735 Biofilm surface layer A KHS93_14450 PF02080 TrkA-C domain KHS93_14450 PF02254 TrkA-N domain KHS93_14455 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KHS93_14455 PF13457 GW (Gly-Tryp) dipeptide domain KHS93_14460 PF00042 Globin KHS93_14460 PF00175 Oxidoreductase NAD-binding domain KHS93_14460 PF00970 Oxidoreductase FAD-binding domain KHS93_14500 PF01471 Putative peptidoglycan binding domain KHS93_14500 PF01510 N-acetylmuramoyl-L-alanine amidase KHS93_14505 PF04688 SPP1 phage holin KHS93_14510 PF10779 Haemolysin XhlA KHS93_14560 PF00704 Glycosyl hydrolases family 18 KHS93_14560 PF00041 Fibronectin type III domain KHS93_14625 PF10668 Phage terminase small subunit KHS93_14650 PF08281 Sigma-70, region 4 KHS93_14700 PF17356 Phage-like element PBSX protein XtrA KHS93_14725 PF01695 IstB-like ATP binding protein KHS93_14730 PF07261 Replication initiation and membrane attachment KHS93_14750 PF09466 Hypothetical protein Yqai KHS93_14755 PF17448 Uncharacterized YqaH-like KHS93_14760 PF01381 Helix-turn-helix KHS93_14780 PF01381 Helix-turn-helix KHS93_14790 PF06114 IrrE N-terminal-like domain KHS93_14795 PF14659 Phage integrase, N-terminal SAM-like domain KHS93_14795 PF00589 Phage integrase family KHS93_14805 PF02673 Bacitracin resistance protein BacA KHS93_14810 PF01594 AI-2E family transporter KHS93_14815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KHS93_14815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KHS93_14820 PF01965 DJ-1/PfpI family KHS93_14825 PF02743 Cache domain KHS93_14825 PF00672 HAMP domain KHS93_14825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHS93_14830 PF02743 Cache domain KHS93_14830 PF00672 HAMP domain KHS93_14830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHS93_14835 PF02743 Cache domain KHS93_14835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHS93_14835 PF00672 HAMP domain KHS93_14840 PF02743 Cache domain KHS93_14840 PF00672 HAMP domain KHS93_14840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KHS93_14855 PF03060 Nitronate monooxygenase KHS93_14860 PF01894 Uncharacterised protein family UPF0047 KHS93_14865 PF00128 Alpha amylase, catalytic domain KHS93_14865 PF16657 Maltogenic Amylase, C-terminal domain KHS93_14870 PF00571 CBS domain KHS93_14870 PF03471 Transporter associated domain KHS93_14870 PF01595 Cyclin M transmembrane N-terminal domain KHS93_14875 PF04298 Putative neutral zinc metallopeptidase KHS93_14885 PF11458 Membrane-integrating protein Mistic KHS93_14890 PF07885 Ion channel KHS93_14890 PF02254 TrkA-N domain KHS93_14895 PF08868 YugN-like family KHS93_14905 PF00342 Phosphoglucose isomerase KHS93_14910 PF03358 NADPH-dependent FMN reductase KHS93_14915 PF00857 Isochorismatase family KHS93_14920 PF00465 Iron-containing alcohol dehydrogenase KHS93_14925 PF00465 Iron-containing alcohol dehydrogenase KHS93_14930 PF04070 Domain of unknown function (DUF378) KHS93_14935 PF00575 S1 RNA binding domain KHS93_14940 PF00155 Aminotransferase class I and II KHS93_14945 PF01037 Lrp/AsnC ligand binding domain KHS93_14950 PF00561 alpha/beta hydrolase fold KHS93_14950 PF08386 TAP-like protein KHS93_14955 PF08958 Domain of unknown function (DUF1871) KHS93_14960 PF00155 Aminotransferase class I and II KHS93_14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_14965 PF00512 His Kinase A (phospho-acceptor) domain KHS93_14970 PF08810 Kinase associated protein B KHS93_14975 PF00929 Exonuclease KHS93_14980 PF07690 Major Facilitator Superfamily KHS93_14985 PF00912 Transglycosylase KHS93_14985 PF00905 Penicillin binding protein transpeptidase domain KHS93_14990 PF04134 Protein of unknown function, DUF393 KHS93_14995 PF17328 Family of unknown function (DUF5366) KHS93_15000 PF00989 PAS fold KHS93_15000 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KHS93_15000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_15000 PF17203 Single cache domain 3 KHS93_15005 PF00072 Response regulator receiver domain KHS93_15010 PF02608 ABC transporter substrate-binding protein PnrA-like KHS93_15015 PF00005 ABC transporter KHS93_15020 PF02653 Branched-chain amino acid transport system / permease component KHS93_15025 PF02653 Branched-chain amino acid transport system / permease component KHS93_15035 PF13244 Domain of unknown function (DUF4040) KHS93_15035 PF00361 Proton-conducting membrane transporter KHS93_15035 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KHS93_15040 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KHS93_15045 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KHS93_15050 PF00361 Proton-conducting membrane transporter KHS93_15055 PF01899 Na+/H+ ion antiporter subunit KHS93_15060 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KHS93_15065 PF03334 Na+/H+ antiporter subunit KHS93_15070 PF03061 Thioesterase superfamily KHS93_15075 PF00196 Bacterial regulatory proteins, luxR family KHS93_15075 PF00072 Response regulator receiver domain KHS93_15090 PF00348 Polyprenyl synthetase KHS93_15095 PF08181 DegQ (SacQ) family KHS93_15105 PF00563 EAL domain KHS93_15105 PF08668 HDOD domain KHS93_15110 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KHS93_15110 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KHS93_15110 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KHS93_15115 PF00857 Isochorismatase family KHS93_15120 PF07997 Protein of unknown function (DUF1694) KHS93_15125 PF14166 YueH-like protein KHS93_15130 PF10676 Spore germination protein gerPA/gerPF KHS93_15135 PF01594 AI-2E family transporter KHS93_15140 PF10842 Protein of unknown function (DUF2642) KHS93_15145 PF01966 HD domain KHS93_15150 PF00106 short chain dehydrogenase KHS93_15155 PF17355 Family of unknown function (DUF5383) KHS93_15165 PF12538 DNA transporter KHS93_15165 PF01580 FtsK/SpoIIIE family KHS93_15170 PF10140 WXG100 protein secretion system (Wss), protein YukC KHS93_15175 PF08817 WXG100 protein secretion system (Wss), protein YukD KHS93_15180 PF06013 Proteins of 100 residues with WXG KHS93_15185 PF13556 PucR C-terminal helix-turn-helix domain KHS93_15185 PF17853 GGDEF-like domain KHS93_15185 PF06018 CodY GAF-like domain KHS93_15190 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KHS93_15190 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KHS93_15195 PF10042 Uncharacterized conserved protein (DUF2278) KHS93_15200 PF03621 MbtH-like protein KHS93_15205 PF00501 AMP-binding enzyme KHS93_15205 PF00550 Phosphopantetheine attachment site KHS93_15205 PF00975 Thioesterase domain KHS93_15205 PF13193 AMP-binding enzyme C-terminal domain KHS93_15205 PF00668 Condensation domain KHS93_15210 PF00857 Isochorismatase family KHS93_15210 PF00550 Phosphopantetheine attachment site KHS93_15215 PF00501 AMP-binding enzyme KHS93_15215 PF13193 AMP-binding enzyme C-terminal domain KHS93_15220 PF00425 chorismate binding enzyme KHS93_15225 PF00106 short chain dehydrogenase KHS93_15230 PF00756 Putative esterase KHS93_15235 PF00174 Oxidoreductase molybdopterin binding domain KHS93_15240 PF02632 BioY family KHS93_15245 PF13726 Na+-H+ antiporter family KHS93_15245 PF03553 Na+/H+ antiporter family KHS93_15250 PF00883 Cytosol aminopeptidase family, catalytic domain KHS93_15250 PF02789 Cytosol aminopeptidase family, N-terminal domain KHS93_15255 PF02681 Divergent PAP2 family KHS93_15260 PF06725 3D domain KHS93_15265 PF14068 Putative membrane protein KHS93_15270 PF17302 Family of unknown function (DUF5351) KHS93_15275 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHS93_15280 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHS93_15290 PF00478 IMP dehydrogenase / GMP reductase domain KHS93_15305 PF00005 ABC transporter KHS93_15315 PF09221 Bacteriocin class IId cyclical uberolysin-like KHS93_15330 PF00106 short chain dehydrogenase KHS93_15335 PF01521 Iron-sulphur cluster biosynthesis KHS93_15340 PF01678 Diaminopimelate epimerase KHS93_15345 PF07662 Na+ dependent nucleoside transporter C-terminus KHS93_15345 PF01773 Na+ dependent nucleoside transporter N-terminus KHS93_15350 PF07293 Protein of unknown function (DUF1450) KHS93_15355 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHS93_15360 PF07315 Protein of unknown function (DUF1462) KHS93_15365 PF01106 NifU-like domain KHS93_15370 PF07676 WD40-like Beta Propeller Repeat KHS93_15370 PF00326 Prolyl oligopeptidase family KHS93_15375 PF08544 GHMP kinases C terminal KHS93_15375 PF00288 GHMP kinases N terminal domain KHS93_15380 PF00291 Pyridoxal-phosphate dependent enzyme KHS93_15385 PF01842 ACT domain KHS93_15385 PF00742 Homoserine dehydrogenase KHS93_15385 PF03447 Homoserine dehydrogenase, NAD binding domain KHS93_15395 PF04608 Phosphatidylglycerophosphatase A KHS93_15400 PF13344 Haloacid dehalogenase-like hydrolase KHS93_15405 PF01934 Protein of unknown function DUF86 KHS93_15410 PF06265 Protein of unknown function (DUF1027) KHS93_15415 PF04055 Radical SAM superfamily KHS93_15415 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KHS93_15420 PF01551 Peptidase family M23 KHS93_15425 PF09560 Sporulation protein YunB (Spo_YunB) KHS93_15430 PF02872 5'-nucleotidase, C-terminal domain KHS93_15435 PF01925 Sulfite exporter TauE/SafE KHS93_15440 PF01904 Protein of unknown function DUF72 KHS93_15450 PF01979 Amidohydrolase family KHS93_15455 PF17853 GGDEF-like domain KHS93_15455 PF13556 PucR C-terminal helix-turn-helix domain KHS93_15455 PF07905 Purine catabolism regulatory protein-like family KHS93_15470 PF07690 Major Facilitator Superfamily KHS93_15475 PF00266 Aminotransferase class-V KHS93_15480 PF01546 Peptidase family M20/M25/M40 KHS93_15485 PF04231 Endonuclease I KHS93_15490 PF00005 ABC transporter KHS93_15490 PF17912 MalK OB fold domain KHS93_15490 PF03459 TOBE domain KHS93_15495 PF00392 Bacterial regulatory proteins, gntR family KHS93_15495 PF07702 UTRA domain KHS93_15500 PF00294 pfkB family carbohydrate kinase KHS93_15505 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_15510 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_15515 PF01547 Bacterial extracellular solute-binding protein KHS93_15520 PF01380 SIS domain KHS93_15525 PF07853 Protein of unknown function (DUF1648) KHS93_15530 PF01541 GIY-YIG catalytic domain KHS93_15535 PF01266 FAD dependent oxidoreductase KHS93_15540 PF01209 ubiE/COQ5 methyltransferase family KHS93_15550 PF01374 Glycosyl hydrolase family 46 KHS93_15555 PF01458 Uncharacterized protein family (UPF0051) KHS93_15560 PF01592 NifU-like N terminal domain KHS93_15565 PF00266 Aminotransferase class-V KHS93_15570 PF01458 Uncharacterized protein family (UPF0051) KHS93_15575 PF00005 ABC transporter KHS93_15585 PF02627 Carboxymuconolactone decarboxylase family KHS93_15590 PF03180 NLPA lipoprotein KHS93_15595 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_15600 PF00005 ABC transporter KHS93_15600 PF09383 NIL domain KHS93_15605 PF02036 SCP-2 sterol transfer family KHS93_15610 PF00085 Thioredoxin KHS93_15615 PF01751 Toprim domain KHS93_15620 PF10830 Protein of unknown function (DUF2553) KHS93_15625 PF01597 Glycine cleavage H-protein KHS93_15630 PF03960 ArsC family KHS93_15635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KHS93_15635 PF02770 Acyl-CoA dehydrogenase, middle domain KHS93_15635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KHS93_15640 PF02803 Thiolase, C-terminal domain KHS93_15640 PF00108 Thiolase, N-terminal domain KHS93_15645 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KHS93_15645 PF00378 Enoyl-CoA hydratase/isomerase KHS93_15645 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KHS93_15650 PF14115 YuzL-like protein KHS93_15655 PF01619 Proline dehydrogenase KHS93_15665 PF07875 Coat F domain KHS93_15670 PF01047 MarR family KHS93_15675 PF07690 Major Facilitator Superfamily KHS93_15680 PF03466 LysR substrate binding domain KHS93_15680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_15685 PF06314 Acetoacetate decarboxylase (ADC) KHS93_15695 PF10835 Protein of unknown function (DUF2573) KHS93_15700 PF00005 ABC transporter KHS93_15705 PF14039 YusW-like protein KHS93_15715 PF00106 short chain dehydrogenase KHS93_15720 PF00210 Ferritin-like domain KHS93_15725 PF13180 PDZ domain KHS93_15730 PF00072 Response regulator receiver domain KHS93_15730 PF00486 Transcriptional regulatory protein, C terminal KHS93_15735 PF00512 His Kinase A (phospho-acceptor) domain KHS93_15735 PF00672 HAMP domain KHS93_15735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_15745 PF00440 Bacterial regulatory proteins, tetR family KHS93_15750 PF10415 Fumarase C C-terminus KHS93_15750 PF00206 Lyase KHS93_15755 PF13113 Protein of unknown function (DUF3970) KHS93_15760 PF03323 Bacillus/Clostridium GerA spore germination protein KHS93_15765 PF03845 Spore germination protein KHS93_15770 PF05504 Spore germination B3/ GerAC like, C-terminal KHS93_15775 PF00196 Bacterial regulatory proteins, luxR family KHS93_15775 PF00072 Response regulator receiver domain KHS93_15780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_15780 PF07730 Histidine kinase KHS93_15780 PF00672 HAMP domain KHS93_15785 PF09922 Cell wall-active antibiotics response 4TMS YvqF KHS93_15790 PF13349 Putative adhesin KHS93_15795 PF04012 PspA/IM30 family KHS93_15805 PF07690 Major Facilitator Superfamily KHS93_15810 PF01923 Cobalamin adenosyltransferase KHS93_15815 PF00005 ABC transporter KHS93_15820 PF01032 FecCD transport family KHS93_15825 PF01497 Periplasmic binding protein KHS93_15830 PF00106 short chain dehydrogenase KHS93_15835 PF08450 SMP-30/Gluconolactonase/LRE-like region KHS93_15840 PF00512 His Kinase A (phospho-acceptor) domain KHS93_15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_15845 PF00486 Transcriptional regulatory protein, C terminal KHS93_15845 PF00072 Response regulator receiver domain KHS93_15855 PF04545 Sigma-70, region 4 KHS93_15860 PF12841 YvrJ protein family KHS93_15865 PF00190 Cupin KHS93_15870 PF14184 Regulatory protein YrvL KHS93_15875 PF00005 ABC transporter KHS93_15880 PF01032 FecCD transport family KHS93_15885 PF01032 FecCD transport family KHS93_15890 PF01497 Periplasmic binding protein KHS93_15895 PF04072 Leucine carboxyl methyltransferase KHS93_15900 PF13520 Amino acid permease KHS93_15905 PF09575 Small spore protein J (Spore_SspJ) KHS93_15910 PF04307 LexA-binding, inner membrane-associated putative hydrolase KHS93_15915 PF00884 Sulfatase KHS93_15920 PF12728 Helix-turn-helix domain KHS93_15920 PF12727 PBP superfamily domain KHS93_15930 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_15935 PF00072 Response regulator receiver domain KHS93_15935 PF00196 Bacterial regulatory proteins, luxR family KHS93_15940 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term KHS93_15940 PF00672 HAMP domain KHS93_15940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_15940 PF07730 Histidine kinase KHS93_15945 PF00005 ABC transporter KHS93_15960 PF00248 Aldo/keto reductase family KHS93_15970 PF00999 Sodium/hydrogen exchanger family KHS93_15975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KHS93_15975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KHS93_15980 PF00667 FAD binding domain KHS93_15980 PF00175 Oxidoreductase NAD-binding domain KHS93_15980 PF00258 Flavodoxin KHS93_15985 PF13538 UvrD-like helicase C-terminal domain KHS93_15990 PF03458 UPF0126 domain KHS93_16000 PF02600 Disulfide bond formation protein DsbB KHS93_16005 PF13462 Thioredoxin KHS93_16010 PF00403 Heavy-metal-associated domain KHS93_16015 PF00403 Heavy-metal-associated domain KHS93_16020 PF00403 Heavy-metal-associated domain KHS93_16025 PF02583 Metal-sensitive transcriptional repressor KHS93_16030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KHS93_16030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KHS93_16035 PF02525 Flavodoxin-like fold KHS93_16045 PF07690 Major Facilitator Superfamily KHS93_16060 PF00296 Luciferase-like monooxygenase KHS93_16065 PF00462 Glutaredoxin KHS93_16070 PF00296 Luciferase-like monooxygenase KHS93_16075 PF00005 ABC transporter KHS93_16080 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_16085 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_16090 PF00497 Bacterial extracellular solute-binding proteins, family 3 KHS93_16095 PF00497 Bacterial extracellular solute-binding proteins, family 3 KHS93_16100 PF00583 Acetyltransferase (GNAT) family KHS93_16105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_16105 PF03466 LysR substrate binding domain KHS93_16110 PF00106 short chain dehydrogenase KHS93_16115 PF01337 Barstar (barnase inhibitor) KHS93_16125 PF01668 SmpB protein KHS93_16130 PF00773 RNB domain KHS93_16130 PF00575 S1 RNA binding domain KHS93_16130 PF17876 Cold shock domain KHS93_16130 PF08206 Ribonuclease B OB domain KHS93_16135 PF12146 Serine aminopeptidase, S33 KHS93_16140 PF03840 Preprotein translocase SecG subunit KHS93_16145 PF01381 Helix-turn-helix KHS93_16160 PF01638 HxlR-like helix-turn-helix KHS93_16165 PF00512 His Kinase A (phospho-acceptor) domain KHS93_16165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_16170 PF00486 Transcriptional regulatory protein, C terminal KHS93_16170 PF00072 Response regulator receiver domain KHS93_16185 PF00005 ABC transporter KHS93_16190 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_16195 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KHS93_16200 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_16205 PF00005 ABC transporter KHS93_16205 PF00571 CBS domain KHS93_16210 PF12802 MarR family KHS93_16215 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_16220 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KHS93_16225 PF00528 Binding-protein-dependent transport system inner membrane component KHS93_16230 PF00571 CBS domain KHS93_16230 PF00005 ABC transporter KHS93_16235 PF12802 MarR family KHS93_16240 PF01914 MarC family integral membrane protein KHS93_16250 PF13240 zinc-ribbon domain KHS93_16255 PF00583 Acetyltransferase (GNAT) family KHS93_16270 PF02585 GlcNAc-PI de-N-acetylase KHS93_16285 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KHS93_16290 PF01370 NAD dependent epimerase/dehydratase family KHS93_16295 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KHS93_16300 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KHS93_16300 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KHS93_16300 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KHS93_16305 PF04389 Peptidase family M28 KHS93_16305 PF02225 PA domain KHS93_16310 PF00113 Enolase, C-terminal TIM barrel domain KHS93_16310 PF03952 Enolase, N-terminal domain KHS93_16315 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KHS93_16315 PF01676 Metalloenzyme superfamily KHS93_16320 PF00121 Triosephosphate isomerase KHS93_16325 PF00162 Phosphoglycerate kinase KHS93_16330 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KHS93_16330 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KHS93_16335 PF04198 Putative sugar-binding domain KHS93_16340 PF00083 Sugar (and other) transporter KHS93_16345 PF00392 Bacterial regulatory proteins, gntR family KHS93_16350 PF00296 Luciferase-like monooxygenase KHS93_16360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_16360 PF03466 LysR substrate binding domain KHS93_16365 PF00892 EamA-like transporter family KHS93_16370 PF00324 Amino acid permease KHS93_16375 PF01418 Helix-turn-helix domain, rpiR family KHS93_16375 PF01380 SIS domain KHS93_16380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KHS93_16380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KHS93_16385 PF02447 GntP family permease KHS93_16390 PF02589 LUD domain KHS93_16395 PF11870 Domain of unknown function (DUF3390) KHS93_16395 PF13183 4Fe-4S dicluster domain KHS93_16395 PF02589 LUD domain KHS93_16400 PF02754 Cysteine-rich domain KHS93_16405 PF00155 Aminotransferase class I and II KHS93_16410 PF07729 FCD domain KHS93_16410 PF00392 Bacterial regulatory proteins, gntR family KHS93_16415 PF02652 L-lactate permease KHS93_16420 PF00309 Sigma-54 factor, Activator interacting domain (AID) KHS93_16420 PF04963 Sigma-54 factor, core binding domain KHS93_16420 PF04552 Sigma-54, DNA binding domain KHS93_16425 PF09628 YvfG protein KHS93_16430 PF04230 Polysaccharide pyruvyl transferase KHS93_16435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KHS93_16440 PF17836 PglD N-terminal domain KHS93_16440 PF00132 Bacterial transferase hexapeptide (six repeats) KHS93_16445 PF02397 Bacterial sugar transferase KHS93_16450 PF14667 Polysaccharide biosynthesis C-terminal domain KHS93_16450 PF01943 Polysaccharide biosynthesis protein KHS93_16455 PF00535 Glycosyl transferase family 2 KHS93_16460 PF04230 Polysaccharide pyruvyl transferase KHS93_16465 PF00535 Glycosyl transferase family 2 KHS93_16475 PF00534 Glycosyl transferases group 1 KHS93_16475 PF13439 Glycosyltransferase Family 4 KHS93_16480 PF00535 Glycosyl transferase family 2 KHS93_16485 PF00534 Glycosyl transferases group 1 KHS93_16485 PF13439 Glycosyltransferase Family 4 KHS93_16490 PF02719 Polysaccharide biosynthesis protein KHS93_16495 PF13614 AAA domain KHS93_16500 PF02706 Chain length determinant protein KHS93_16505 PF01381 Helix-turn-helix KHS93_16505 PF08671 Anti-repressor SinI KHS93_16510 PF00135 Carboxylesterase family KHS93_16520 PF01872 RibD C-terminal domain KHS93_16530 PF00583 Acetyltransferase (GNAT) family KHS93_16535 PF05870 Phenolic acid decarboxylase (PAD) KHS93_16565 PF08244 Glycosyl hydrolases family 32 C terminal KHS93_16565 PF00251 Glycosyl hydrolases family 32 N-terminal domain KHS93_16570 PF01306 LacY proton/sugar symporter KHS93_16575 PF00356 Bacterial regulatory proteins, lacI family KHS93_16580 PF00574 Clp protease KHS93_16585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_16585 PF03466 LysR substrate binding domain KHS93_16590 PF04303 PrpF protein KHS93_16595 PF00083 Sugar (and other) transporter KHS93_16600 PF03641 Possible lysine decarboxylase KHS93_16605 PF03819 MazG nucleotide pyrophosphohydrolase domain KHS93_16610 PF01740 STAS domain KHS93_16610 PF00916 Sulfate permease family KHS93_16615 PF00484 Carbonic anhydrase KHS93_16620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KHS93_16620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KHS93_16625 PF00545 ribonuclease KHS93_16630 PF00797 N-acetyltransferase KHS93_16635 PF00381 PTS HPr component phosphorylation site KHS93_16640 PF10298 WhiA N-terminal LAGLIDADG-like domain KHS93_16640 PF14527 WhiA LAGLIDADG-like domain KHS93_16640 PF02650 WhiA C-terminal HTH domain KHS93_16645 PF01933 Uncharacterised protein family UPF0052 KHS93_16650 PF03668 P-loop ATPase protein family KHS93_16655 PF00293 NUDIX domain KHS93_16660 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHS93_16665 PF00877 NlpC/P60 family KHS93_16675 PF00512 His Kinase A (phospho-acceptor) domain KHS93_16675 PF00672 HAMP domain KHS93_16675 PF00989 PAS fold KHS93_16675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_16675 PF18698 Histidine kinase sensor domain KHS93_16680 PF00072 Response regulator receiver domain KHS93_16680 PF00486 Transcriptional regulatory protein, C terminal KHS93_16690 PF00664 ABC transporter transmembrane region KHS93_16690 PF00005 ABC transporter KHS93_16695 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KHS93_16695 PF01502 Phosphoribosyl-AMP cyclohydrolase KHS93_16700 PF00977 Histidine biosynthesis protein KHS93_16705 PF00977 Histidine biosynthesis protein KHS93_16710 PF00117 Glutamine amidotransferase class-I KHS93_16715 PF00475 Imidazoleglycerol-phosphate dehydratase KHS93_16720 PF00815 Histidinol dehydrogenase KHS93_16725 PF01634 ATP phosphoribosyltransferase KHS93_16730 PF13393 Histidyl-tRNA synthetase KHS93_16735 PF13529 Peptidase_C39 like family KHS93_16740 PF14602 Hexapeptide repeat of succinyl-transferase KHS93_16745 PF13419 Haloacid dehalogenase-like hydrolase KHS93_16750 PF01790 Prolipoprotein diacylglyceryl transferase KHS93_16755 PF07475 HPr Serine kinase C-terminal domain KHS93_16755 PF02603 HPr Serine kinase N terminus KHS93_16760 PF01979 Amidohydrolase family KHS93_16765 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KHS93_16770 PF00392 Bacterial regulatory proteins, gntR family KHS93_16770 PF07702 UTRA domain KHS93_16775 PF00440 Bacterial regulatory proteins, tetR family KHS93_16780 PF00149 Calcineurin-like phosphoesterase KHS93_16785 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KHS93_16790 PF04024 PspC domain KHS93_16795 PF13349 Putative adhesin KHS93_16810 PF17755 UvrA DNA-binding domain KHS93_16810 PF17760 UvrA interaction domain KHS93_16810 PF00005 ABC transporter KHS93_16815 PF12344 Ultra-violet resistance protein B KHS93_16815 PF17757 UvrB interaction domain KHS93_16815 PF04851 Type III restriction enzyme, res subunit KHS93_16815 PF00271 Helicase conserved C-terminal domain KHS93_16815 PF02151 UvrB/uvrC motif KHS93_16820 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) KHS93_16825 PF00391 PEP-utilising enzyme, mobile domain KHS93_16825 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KHS93_16830 PF00440 Bacterial regulatory proteins, tetR family KHS93_16835 PF07690 Major Facilitator Superfamily KHS93_16855 PF00975 Thioesterase domain KHS93_16865 PF17820 PDZ domain KHS93_16870 PF17423 Swarming motility protein KHS93_16875 PF03572 Peptidase family S41 KHS93_16875 PF01471 Putative peptidoglycan binding domain KHS93_16875 PF17820 PDZ domain KHS93_16885 PF18075 FtsX extracellular domain KHS93_16885 PF02687 FtsX-like permease family KHS93_16890 PF00005 ABC transporter KHS93_16895 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KHS93_16900 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHS93_16900 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHS93_16910 PF02810 SEC-C motif KHS93_16910 PF07516 SecA Wing and Scaffold domain KHS93_16910 PF07517 SecA DEAD-like domain KHS93_16910 PF01043 SecA preprotein cross-linking domain KHS93_16915 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KHS93_16915 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KHS93_16930 PF02561 Flagellar protein FliS KHS93_16935 PF07196 Flagellin hook IN motif KHS93_16935 PF07195 Flagellar hook-associated protein 2 C-terminus KHS93_16935 PF02465 Flagellar hook-associated protein 2 N-terminus KHS93_16940 PF00669 Bacterial flagellin N-terminal helical region KHS93_16940 PF00700 Bacterial flagellin C-terminal helical region KHS93_16945 PF02599 Global regulator protein family KHS93_16950 PF02623 FliW protein KHS93_16960 PF00700 Bacterial flagellin C-terminal helical region KHS93_16960 PF00669 Bacterial flagellin N-terminal helical region KHS93_16965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KHS93_16965 PF00460 Flagella basal body rod protein KHS93_16970 PF05130 FlgN protein KHS93_16975 PF04316 Anti-sigma-28 factor, FlgM KHS93_16990 PF10719 Late competence development protein ComFB KHS93_16995 PF00271 Helicase conserved C-terminal domain KHS93_16995 PF04851 Type III restriction enzyme, res subunit KHS93_17000 PF02645 Uncharacterised protein, DegV family COG1307 KHS93_17005 PF00072 Response regulator receiver domain KHS93_17005 PF00196 Bacterial regulatory proteins, luxR family KHS93_17010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_17010 PF05384 Sensor protein DegS KHS93_17010 PF07730 Histidine kinase KHS93_17015 PF01205 Uncharacterized protein family UPF0029 KHS93_17015 PF09186 Domain of unknown function (DUF1949) KHS93_17020 PF03816 Cell envelope-related transcriptional attenuator domain KHS93_17025 PF00953 Glycosyl transferase family 4 KHS93_17035 PF00535 Glycosyl transferase family 2 KHS93_17040 PF02706 Chain length determinant protein KHS93_17045 PF04932 O-Antigen ligase KHS93_17050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KHS93_17050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KHS93_17050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KHS93_17055 PF13439 Glycosyltransferase Family 4 KHS93_17055 PF00534 Glycosyl transferases group 1 KHS93_17060 PF01943 Polysaccharide biosynthesis protein KHS93_17060 PF14667 Polysaccharide biosynthesis C-terminal domain KHS93_17065 PF02397 Bacterial sugar transferase KHS93_17070 PF01520 N-acetylmuramoyl-L-alanine amidase KHS93_17070 PF04122 Putative cell wall binding repeat 2 KHS93_17075 PF04122 Putative cell wall binding repeat 2 KHS93_17075 PF08486 Stage II sporulation protein KHS93_17085 PF03816 Cell envelope-related transcriptional attenuator domain KHS93_17090 PF02350 UDP-N-acetylglucosamine 2-epimerase KHS93_17095 PF00483 Nucleotidyl transferase KHS93_17100 PF00005 ABC transporter KHS93_17105 PF01061 ABC-2 type transporter KHS93_17110 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KHS93_17115 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 KHS93_17115 PF00535 Glycosyl transferase family 2 KHS93_17120 PF01467 Cytidylyltransferase-like KHS93_17125 PF03808 Glycosyl transferase WecB/TagA/CpsF family KHS93_17130 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KHS93_17135 PF05036 Sporulation related domain KHS93_17135 PF08239 Bacterial SH3 domain KHS93_17135 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KHS93_17140 PF01238 Phosphomannose isomerase type I KHS93_17145 PF03323 Bacillus/Clostridium GerA spore germination protein KHS93_17150 PF03845 Spore germination protein KHS93_17155 PF05504 Spore germination B3/ GerAC like, C-terminal KHS93_17165 PF00083 Sugar (and other) transporter KHS93_17170 PF03816 Cell envelope-related transcriptional attenuator domain KHS93_17180 PF04791 LMBR1-like membrane protein KHS93_17185 PF00877 NlpC/P60 family KHS93_17195 PF09587 Bacterial capsule synthesis protein PGA_cap KHS93_17200 PF14102 Capsule biosynthesis CapC KHS93_17205 PF08245 Mur ligase middle domain KHS93_17210 PF03323 Bacillus/Clostridium GerA spore germination protein KHS93_17215 PF03845 Spore germination protein KHS93_17225 PF00356 Bacterial regulatory proteins, lacI family KHS93_17230 PF00294 pfkB family carbohydrate kinase KHS93_17235 PF05025 RbsD / FucU transport protein family KHS93_17240 PF00005 ABC transporter KHS93_17245 PF02653 Branched-chain amino acid transport system / permease component KHS93_17250 PF13407 Periplasmic binding protein domain KHS93_17255 PF08239 Bacterial SH3 domain KHS93_17260 PF02525 Flavodoxin-like fold KHS93_17265 PF03306 Alpha-acetolactate decarboxylase KHS93_17270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KHS93_17270 PF00205 Thiamine pyrophosphate enzyme, central domain KHS93_17270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KHS93_17275 PF03466 LysR substrate binding domain KHS93_17275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_17280 PF02040 Arsenical pump membrane protein KHS93_17295 PF08757 CotH kinase protein KHS93_17305 PF01613 Flavin reductase like domain KHS93_17320 PF01037 Lrp/AsnC ligand binding domain KHS93_17320 PF13404 AsnC-type helix-turn-helix domain KHS93_17325 PF02417 Chromate transporter KHS93_17330 PF02417 Chromate transporter KHS93_17340 PF03358 NADPH-dependent FMN reductase KHS93_17345 PF03466 LysR substrate binding domain KHS93_17345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_17350 PF04493 Endonuclease V KHS93_17370 PF14449 Pre-toxin TG KHS93_17370 PF04740 LXG domain of WXG superfamily KHS93_17395 PF04740 LXG domain of WXG superfamily KHS93_17395 PF14449 Pre-toxin TG KHS93_17395 PF14431 YwqJ-like deaminase KHS93_17405 PF16888 Domain of unknown function (DUF5082) KHS93_17410 PF09234 Domain of unknown function (DUF1963) KHS93_17415 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KHS93_17415 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KHS93_17415 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KHS93_17425 PF13614 AAA domain KHS93_17430 PF13807 G-rich domain on putative tyrosine kinase KHS93_17430 PF02706 Chain length determinant protein KHS93_17440 PF04434 SWIM zinc finger KHS93_17445 PF12419 SNF2 Helicase protein KHS93_17445 PF00271 Helicase conserved C-terminal domain KHS93_17445 PF00176 SNF2 family N-terminal domain KHS93_17455 PF00455 DeoR C terminal sensor domain KHS93_17455 PF08220 DeoR-like helix-turn-helix domain KHS93_17460 PF00436 Single-strand binding protein family KHS93_17470 PF14183 YwpF-like protein KHS93_17475 PF01741 Large-conductance mechanosensitive channel, MscL KHS93_17480 PF07977 FabA-like domain KHS93_17485 PF18801 response regulator aspartate phosphatase H, N terminal KHS93_17490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KHS93_17490 PF00460 Flagella basal body rod protein KHS93_17495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KHS93_17495 PF00460 Flagella basal body rod protein KHS93_17505 PF12116 Stage III sporulation protein D KHS93_17510 PF01047 MarR family KHS93_17515 PF07690 Major Facilitator Superfamily KHS93_17520 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KHS93_17525 PF07690 Major Facilitator Superfamily KHS93_17530 PF00857 Isochorismatase family KHS93_17535 PF00909 Ammonium Transporter Family KHS93_17540 PF00543 Nitrogen regulatory protein P-II KHS93_17545 PF01098 Cell cycle protein KHS93_17550 PF01569 PAP2 superfamily KHS93_17555 PF04892 VanZ like family KHS93_17560 PF01551 Peptidase family M23 KHS93_17565 PF00583 Acetyltransferase (GNAT) family KHS93_17570 PF17319 Family of unknown function (DUF5362) KHS93_17575 PF17370 Family of unknown function (DUF5392) KHS93_17580 PF13396 Phospholipase_D-nuclease N-terminal KHS93_17580 PF13091 PLD-like domain KHS93_17585 PF17319 Family of unknown function (DUF5362) KHS93_17590 PF00457 Glycosyl hydrolases family 11 KHS93_17600 PF02082 Transcriptional regulator KHS93_17605 PF01979 Amidohydrolase family KHS93_17605 PF00449 Urease alpha-subunit, N-terminal domain KHS93_17610 PF00699 Urease beta subunit KHS93_17615 PF00547 Urease, gamma subunit KHS93_17620 PF05532 CsbD-like KHS93_17630 PF18801 response regulator aspartate phosphatase H, N terminal KHS93_17630 PF17874 MalT-like TPR region KHS93_17635 PF06463 Molybdenum Cofactor Synthesis C KHS93_17635 PF04055 Radical SAM superfamily KHS93_17640 PF02634 FdhD/NarQ family KHS93_17650 PF00092 von Willebrand factor type A domain KHS93_17655 PF00092 von Willebrand factor type A domain KHS93_17660 PF08486 Stage II sporulation protein KHS93_17665 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KHS93_17670 PF08680 TATA-box binding KHS93_17675 PF06612 Protein of unknown function (DUF1146) KHS93_17685 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KHS93_17685 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KHS93_17690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KHS93_17690 PF02874 ATP synthase alpha/beta family, beta-barrel domain KHS93_17695 PF00231 ATP synthase KHS93_17700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KHS93_17700 PF00306 ATP synthase alpha/beta chain, C terminal domain KHS93_17700 PF02874 ATP synthase alpha/beta family, beta-barrel domain KHS93_17705 PF00213 ATP synthase delta (OSCP) subunit KHS93_17710 PF00430 ATP synthase B/B' CF(0) KHS93_17715 PF00137 ATP synthase subunit C KHS93_17720 PF00119 ATP synthase A chain KHS93_17725 PF03899 ATP synthase I chain KHS93_17735 PF00464 Serine hydroxymethyltransferase KHS93_17740 PF04260 Protein of unknown function (DUF436) KHS93_17745 PF02502 Ribose/Galactose Isomerase KHS93_17750 PF01451 Low molecular weight phosphotyrosine protein phosphatase KHS93_17755 PF02659 Putative manganese efflux pump KHS93_17760 PF01300 Telomere recombination KHS93_17760 PF03481 Putative GTP-binding controlling metal-binding KHS93_17770 PF09551 Stage II sporulation protein R (spore_II_R) KHS93_17775 PF17094 Uncharacterised protein family (UPF0715) KHS93_17780 PF17247 Family of unknown function (DUF5316) KHS93_17785 PF17827 PrmC N-terminal domain KHS93_17785 PF05175 Methyltransferase small domain KHS93_17790 PF03462 PCRF domain KHS93_17790 PF00472 RF-1 domain KHS93_17795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHS93_17800 PF13411 MerR HTH family regulatory protein KHS93_17805 PF03547 Membrane transport protein KHS93_17810 PF03949 Malic enzyme, NAD binding domain KHS93_17810 PF00390 Malic enzyme, N-terminal domain KHS93_17815 PF00265 Thymidine kinase KHS93_17820 PF01197 Ribosomal protein L31 KHS93_17825 PF07497 Rho termination factor, RNA-binding domain KHS93_17825 PF07498 Rho termination factor, N-terminal domain KHS93_17825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KHS93_17830 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KHS93_17835 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KHS93_17840 PF00923 Transaldolase/Fructose-6-phosphate aldolase KHS93_17845 PF01116 Fructose-bisphosphate aldolase class-II KHS93_17850 PF00072 Response regulator receiver domain KHS93_17855 PF10740 Domain of unknown function (DUF2529) KHS93_17860 PF06418 CTP synthase N-terminus KHS93_17860 PF00117 Glutamine amidotransferase class-I KHS93_17865 PF05066 HB1, ASXL, restriction endonuclease HTH domain KHS93_17870 PF13183 4Fe-4S dicluster domain KHS93_17870 PF02754 Cysteine-rich domain KHS93_17875 PF13091 PLD-like domain KHS93_17880 PF03851 UV-endonuclease UvdE KHS93_17890 PF00664 ABC transporter transmembrane region KHS93_17890 PF00005 ABC transporter KHS93_17895 PF13091 PLD-like domain KHS93_17895 PF13396 Phospholipase_D-nuclease N-terminal KHS93_17905 PF02665 Nitrate reductase gamma subunit KHS93_17910 PF02613 Nitrate reductase delta subunit KHS93_17915 PF14711 Respiratory nitrate reductase beta C-terminal KHS93_17915 PF13247 4Fe-4S dicluster domain KHS93_17920 PF14710 Respiratory nitrate reductase alpha N-terminal KHS93_17920 PF01568 Molydopterin dinucleotide binding domain KHS93_17920 PF00384 Molybdopterin oxidoreductase KHS93_17930 PF14256 YwiC-like protein KHS93_17935 PF00325 Bacterial regulatory proteins, crp family KHS93_17935 PF00027 Cyclic nucleotide-binding domain KHS93_17940 PF07690 Major Facilitator Superfamily KHS93_17945 PF00750 tRNA synthetases class I (R) KHS93_17945 PF05746 DALR anticodon binding domain KHS93_17945 PF03485 Arginyl tRNA synthetase N terminal domain KHS93_17950 PF09148 Domain of unknown function (DUF1934) KHS93_17955 PF18801 response regulator aspartate phosphatase H, N terminal KHS93_17960 PF11131 Rap-phr extracellular signalling KHS93_17990 PF00491 Arginase family KHS93_17995 PF17284 Spermidine synthase tetramerisation domain KHS93_18000 PF00905 Penicillin binding protein transpeptidase domain KHS93_18000 PF00912 Transglycosylase KHS93_18010 PF08741 YwhD family KHS93_18015 PF02163 Peptidase family M50 KHS93_18020 PF01361 Tautomerase enzyme KHS93_18025 PF01047 MarR family KHS93_18030 PF13520 Amino acid permease KHS93_18040 PF01966 HD domain KHS93_18045 PF07293 Protein of unknown function (DUF1450) KHS93_18055 PF03551 Transcriptional regulator PadR-like family KHS93_18065 PF00005 ABC transporter KHS93_18070 PF12679 ABC-2 family transporter protein KHS93_18095 PF03099 Biotin/lipoate A/B protein ligase family KHS93_18100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_18100 PF03466 LysR substrate binding domain KHS93_18105 PF03601 Conserved hypothetical protein 698 KHS93_18110 PF01515 Phosphate acetyl/butaryl transferase KHS93_18115 PF06778 Chlorite dismutase KHS93_18125 PF00155 Aminotransferase class I and II KHS93_18130 PF07690 Major Facilitator Superfamily KHS93_18145 PF07883 Cupin domain KHS93_18155 PF07690 Major Facilitator Superfamily KHS93_18160 PF07690 Major Facilitator Superfamily KHS93_18165 PF00324 Amino acid permease KHS93_18170 PF01546 Peptidase family M20/M25/M40 KHS93_18175 PF00171 Aldehyde dehydrogenase family KHS93_18180 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KHS93_18180 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KHS93_18185 PF17735 Biofilm surface layer A KHS93_18190 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KHS93_18195 PF04321 RmlD substrate binding domain KHS93_18200 PF16363 GDP-mannose 4,6 dehydratase KHS93_18205 PF00483 Nucleotidyl transferase KHS93_18210 PF04101 Glycosyltransferase family 28 C-terminal domain KHS93_18215 PF02348 Cytidylyltransferase KHS93_18220 PF08666 SAF domain KHS93_18220 PF03102 NeuB family KHS93_18225 PF00583 Acetyltransferase (GNAT) family KHS93_18230 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KHS93_18235 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KHS93_18240 PF00535 Glycosyl transferase family 2 KHS93_18245 PF09671 Spore coat protein (Spore_GerQ) KHS93_18250 PF04241 Protein of unknown function (DUF423) KHS93_18255 PF00860 Permease family KHS93_18260 PF17261 Family of unknown function (DUF5327) KHS93_18265 PF03167 Uracil DNA glycosylase superfamily KHS93_18270 PF00535 Glycosyl transferase family 2 KHS93_18285 PF03551 Transcriptional regulator PadR-like family KHS93_18290 PF08543 Phosphomethylpyrimidine kinase KHS93_18300 PF00251 Glycosyl hydrolases family 32 N-terminal domain KHS93_18300 PF08244 Glycosyl hydrolases family 32 C terminal KHS93_18305 PF02378 Phosphotransferase system, EIIC KHS93_18305 PF00367 phosphotransferase system, EIIB KHS93_18310 PF00874 PRD domain KHS93_18310 PF03123 CAT RNA binding domain KHS93_18320 PF05922 Peptidase inhibitor I9 KHS93_18320 PF02225 PA domain KHS93_18320 PF00082 Subtilase family KHS93_18320 PF13860 FlgD Ig-like domain KHS93_18325 PF00296 Luciferase-like monooxygenase KHS93_18330 PF00881 Nitroreductase family KHS93_18335 PF01098 Cell cycle protein KHS93_18340 PF00583 Acetyltransferase (GNAT) family KHS93_18345 PF17368 Spore morphogenesis and germination YwcE KHS93_18350 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KHS93_18355 PF00510 Cytochrome c oxidase subunit III KHS93_18360 PF00115 Cytochrome C and Quinol oxidase polypeptide I KHS93_18365 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KHS93_18365 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KHS93_18370 PF04226 Transglycosylase associated protein KHS93_18375 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KHS93_18375 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KHS93_18385 PF04138 GtrA-like protein KHS93_18390 PF00440 Bacterial regulatory proteins, tetR family KHS93_18395 PF08671 Anti-repressor SinI KHS93_18410 PF01323 DSBA-like thioredoxin domain KHS93_18415 PF10518 TAT (twin-arginine translocation) pathway signal sequence KHS93_18415 PF04261 Dyp-type peroxidase family KHS93_18420 PF09375 Imelysin KHS93_18430 PF02581 Thiamine monophosphate synthase KHS93_18435 PF02110 Hydroxyethylthiazole kinase family KHS93_18440 PF03466 LysR substrate binding domain KHS93_18440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_18445 PF03788 LrgA family KHS93_18450 PF04172 LrgB-like family KHS93_18455 PF09962 Uncharacterized conserved protein (DUF2196) KHS93_18460 PF13411 MerR HTH family regulatory protein KHS93_18460 PF07739 TipAS antibiotic-recognition domain KHS93_18465 PF17785 PUA-like domain KHS93_18465 PF10672 S-adenosylmethionine-dependent methyltransferase KHS93_18470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHS93_18475 PF02378 Phosphotransferase system, EIIC KHS93_18480 PF00082 Subtilase family KHS93_18485 PF01501 Glycosyl transferase family 8 KHS93_18490 PF04607 Region found in RelA / SpoT proteins KHS93_18495 PF01040 UbiA prenyltransferase family KHS93_18500 PF12459 D-Ala-teichoic acid biosynthesis protein KHS93_18505 PF00501 AMP-binding enzyme KHS93_18505 PF13193 AMP-binding enzyme C-terminal domain KHS93_18510 PF03062 MBOAT, membrane-bound O-acyltransferase family KHS93_18515 PF00550 Phosphopantetheine attachment site KHS93_18520 PF04914 DltD protein KHS93_18525 PF01063 Amino-transferase class IV KHS93_18530 PF02056 Family 4 glycosyl hydrolase KHS93_18530 PF11975 Family 4 glycosyl hydrolase C-terminal domain KHS93_18535 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KHS93_18540 PF02378 Phosphotransferase system, EIIC KHS93_18545 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KHS93_18550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KHS93_18550 PF00874 PRD domain KHS93_18550 PF05043 Mga helix-turn-helix domain KHS93_18550 PF08279 HTH domain KHS93_18555 PF02245 Methylpurine-DNA glycosylase (MPG) KHS93_18560 PF01032 FecCD transport family KHS93_18565 PF01032 FecCD transport family KHS93_18575 PF01022 Bacterial regulatory protein, arsR family KHS93_18580 PF02040 Arsenical pump membrane protein KHS93_18585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KHS93_18590 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KHS93_18595 PF02378 Phosphotransferase system, EIIC KHS93_18600 PF00232 Glycosyl hydrolase family 1 KHS93_18605 PF00480 ROK family KHS93_18610 PF01238 Phosphomannose isomerase type I KHS93_18615 PF02156 Glycosyl hydrolase family 26 KHS93_18620 PF00199 Catalase KHS93_18620 PF06628 Catalase-related immune-responsive KHS93_18625 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KHS93_18630 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KHS93_18635 PF01256 Carbohydrate kinase KHS93_18640 PF00664 ABC transporter transmembrane region KHS93_18640 PF00005 ABC transporter KHS93_18645 PF00664 ABC transporter transmembrane region KHS93_18645 PF00005 ABC transporter KHS93_18650 PF02322 Cytochrome bd terminal oxidase subunit II KHS93_18655 PF01654 Cytochrome bd terminal oxidase subunit I KHS93_18660 PF03390 2-hydroxycarboxylate transporter family KHS93_18665 PF01522 Polysaccharide deacetylase KHS93_18670 PF03459 TOBE domain KHS93_18670 PF17912 MalK OB fold domain KHS93_18670 PF00005 ABC transporter KHS93_18675 PF13556 PucR C-terminal helix-turn-helix domain KHS93_18680 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHS93_18680 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHS93_18685 PF11611 Domain of unknown function (DUF4352) KHS93_18690 PF16363 GDP-mannose 4,6 dehydratase KHS93_18695 PF07687 Peptidase dimerisation domain KHS93_18695 PF01546 Peptidase family M20/M25/M40 KHS93_18705 PF04525 LURP-one-related KHS93_18710 PF01717 Cobalamin-independent synthase, Catalytic domain KHS93_18715 PF08241 Methyltransferase domain KHS93_18720 PF07662 Na+ dependent nucleoside transporter C-terminus KHS93_18720 PF01773 Na+ dependent nucleoside transporter N-terminus KHS93_18740 PF00199 Catalase KHS93_18740 PF06628 Catalase-related immune-responsive KHS93_18740 PF18011 C-terminal domain found in long catalases KHS93_18745 PF03600 Citrate transporter KHS93_18750 PF00722 Glycosyl hydrolases family 16 KHS93_18760 PF11700 Vacuole effluxer Atg22 like KHS93_18765 PF03880 DbpA RNA binding domain KHS93_18765 PF00271 Helicase conserved C-terminal domain KHS93_18765 PF00270 DEAD/DEAH box helicase KHS93_18780 PF14176 YxiJ-like protein KHS93_18825 PF05593 RHS Repeat KHS93_18830 PF00544 Pectate lyase KHS93_18835 PF00892 EamA-like transporter family KHS93_18840 PF00582 Universal stress protein family KHS93_18850 PF00293 NUDIX domain KHS93_18855 PF16369 C-terminal lipocalin-like domain KHS93_18855 PF04616 Glycosyl hydrolases family 43 KHS93_18860 PF09021 HutP KHS93_18865 PF00221 Aromatic amino acid lyase KHS93_18870 PF01175 Urocanase Rossmann-like domain KHS93_18870 PF17392 Urocanase C-terminal domain KHS93_18870 PF17391 Urocanase N-terminal domain KHS93_18875 PF01979 Amidohydrolase family KHS93_18880 PF00491 Arginase family KHS93_18885 PF00324 Amino acid permease KHS93_18890 PF02885 Glycosyl transferase family, helical bundle domain KHS93_18890 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KHS93_18890 PF00591 Glycosyl transferase family, a/b domain KHS93_18895 PF01773 Na+ dependent nucleoside transporter N-terminus KHS93_18895 PF07662 Na+ dependent nucleoside transporter C-terminus KHS93_18900 PF01791 DeoC/LacD family aldolase KHS93_18905 PF04198 Putative sugar-binding domain KHS93_18920 PF11631 Protein of unknown function (DUF3255) KHS93_18940 PF01497 Periplasmic binding protein KHS93_18945 PF06486 Protein of unknown function (DUF1093) KHS93_18950 PF02687 FtsX-like permease family KHS93_18955 PF00005 ABC transporter KHS93_18960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_18965 PF00486 Transcriptional regulatory protein, C terminal KHS93_18965 PF00072 Response regulator receiver domain KHS93_18970 PF01116 Fructose-bisphosphate aldolase class-II KHS93_18975 PF01261 Xylose isomerase-like TIM barrel KHS93_18980 PF01261 Xylose isomerase-like TIM barrel KHS93_18985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KHS93_18985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KHS93_18990 PF07690 Major Facilitator Superfamily KHS93_18995 PF01261 Xylose isomerase-like TIM barrel KHS93_19000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KHS93_19000 PF00205 Thiamine pyrophosphate enzyme, central domain KHS93_19000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KHS93_19005 PF00294 pfkB family carbohydrate kinase KHS93_19010 PF04962 KduI/IolB family KHS93_19015 PF00171 Aldehyde dehydrogenase family KHS93_19020 PF08220 DeoR-like helix-turn-helix domain KHS93_19020 PF00455 DeoR C terminal sensor domain KHS93_19025 PF00248 Aldo/keto reductase family KHS93_19030 PF00083 Sugar (and other) transporter KHS93_19035 PF00183 Hsp90 protein KHS93_19035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_19045 PF00072 Response regulator receiver domain KHS93_19045 PF00196 Bacterial regulatory proteins, luxR family KHS93_19050 PF07730 Histidine kinase KHS93_19055 PF00487 Fatty acid desaturase KHS93_19060 PF00440 Bacterial regulatory proteins, tetR family KHS93_19065 PF00171 Aldehyde dehydrogenase family KHS93_19070 PF13570 PQQ-like domain KHS93_19070 PF13360 PQQ-like domain KHS93_19070 PF01011 PQQ enzyme repeat KHS93_19075 PF17369 Family of unknown function (DUF5391) KHS93_19085 PF07690 Major Facilitator Superfamily KHS93_19090 PF06271 RDD family KHS93_19100 PF00578 AhpC/TSA family KHS93_19105 PF07992 Pyridine nucleotide-disulphide oxidoreductase KHS93_19105 PF13192 Thioredoxin domain KHS93_19110 PF00324 Amino acid permease KHS93_19115 PF06874 Firmicute fructose-1,6-bisphosphatase KHS93_19120 PF01799 [2Fe-2S] binding domain KHS93_19120 PF00111 2Fe-2S iron-sulfur cluster binding domain KHS93_19130 PF01799 [2Fe-2S] binding domain KHS93_19130 PF00111 2Fe-2S iron-sulfur cluster binding domain KHS93_19130 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KHS93_19130 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KHS93_19135 PF12804 MobA-like NTP transferase domain KHS93_19140 PF02625 XdhC and CoxI family KHS93_19140 PF13478 XdhC Rossmann domain KHS93_19170 PF13286 Phosphohydrolase-associated domain KHS93_19170 PF01966 HD domain KHS93_19175 PF02590 Predicted SPOUT methyltransferase KHS93_19180 PF14116 YyzF-like protein KHS93_19200 PF00248 Aldo/keto reductase family KHS93_19205 PF00583 Acetyltransferase (GNAT) family KHS93_19210 PF18801 response regulator aspartate phosphatase H, N terminal KHS93_19215 PF00491 Arginase family KHS93_19220 PF00324 Amino acid permease KHS93_19225 PF00202 Aminotransferase class-III KHS93_19230 PF13630 SdpI/YhfL protein family KHS93_19230 PF07853 Protein of unknown function (DUF1648) KHS93_19235 PF01022 Bacterial regulatory protein, arsR family KHS93_19240 PF02954 Bacterial regulatory protein, Fis family KHS93_19240 PF13426 PAS domain KHS93_19240 PF00158 Sigma-54 interaction domain KHS93_19250 PF12848 ABC transporter KHS93_19250 PF16326 ABC transporter C-terminal domain KHS93_19250 PF00005 ABC transporter KHS93_19265 PF00899 ThiF family KHS93_19270 PF00989 PAS fold KHS93_19270 PF00512 His Kinase A (phospho-acceptor) domain KHS93_19270 PF16736 Single Cache-like KHS93_19270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_19275 PF00486 Transcriptional regulatory protein, C terminal KHS93_19275 PF00072 Response regulator receiver domain KHS93_19280 PF13180 PDZ domain KHS93_19285 PF00753 Metallo-beta-lactamase superfamily KHS93_19290 PF09648 YycH protein KHS93_19295 PF07435 YycH protein KHS93_19300 PF00672 HAMP domain KHS93_19300 PF00512 His Kinase A (phospho-acceptor) domain KHS93_19300 PF13426 PAS domain KHS93_19300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KHS93_19305 PF00072 Response regulator receiver domain KHS93_19305 PF00486 Transcriptional regulatory protein, C terminal KHS93_19330 PF00709 Adenylosuccinate synthetase KHS93_19335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHS93_19340 PF03796 DnaB-like helicase C terminal domain KHS93_19340 PF00772 DnaB-like helicase N terminal domain KHS93_19345 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) KHS93_19355 PF14174 YycC-like protein KHS93_19360 PF00534 Glycosyl transferases group 1 KHS93_19360 PF13439 Glycosyltransferase Family 4 KHS93_19370 PF02222 ATP-grasp domain KHS93_19375 PF13439 Glycosyltransferase Family 4 KHS93_19375 PF00534 Glycosyl transferases group 1 KHS93_19390 PF01281 Ribosomal protein L9, N-terminal domain KHS93_19390 PF03948 Ribosomal protein L9, C-terminal domain KHS93_19395 PF01368 DHH family KHS93_19395 PF02272 DHHA1 domain KHS93_19400 PF09991 Predicted membrane protein (DUF2232) KHS93_19410 PF07875 Coat F domain KHS93_19415 PF01638 HxlR-like helix-turn-helix KHS93_19420 PF01368 DHH family KHS93_19420 PF02833 DHHA2 domain KHS93_19425 PF00892 EamA-like transporter family KHS93_19430 PF02435 Levansucrase/Invertase KHS93_19435 PF08244 Glycosyl hydrolases family 32 C terminal KHS93_19435 PF00251 Glycosyl hydrolases family 32 N-terminal domain KHS93_19440 PF07729 FCD domain KHS93_19440 PF00392 Bacterial regulatory proteins, gntR family KHS93_19445 PF05163 DinB family KHS93_19450 PF07690 Major Facilitator Superfamily KHS93_19460 PF00881 Nitroreductase family KHS93_19465 PF01047 MarR family KHS93_19470 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KHS93_19470 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KHS93_19475 PF01047 MarR family KHS93_19500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KHS93_19500 PF03466 LysR substrate binding domain KHS93_19510 PF00155 Aminotransferase class I and II KHS93_19510 PF00392 Bacterial regulatory proteins, gntR family KHS93_19515 PF00892 EamA-like transporter family KHS93_19520 PF02525 Flavodoxin-like fold KHS93_19525 PF02082 Transcriptional regulator KHS93_19530 PF01381 Helix-turn-helix KHS93_19535 PF00893 Small Multidrug Resistance protein KHS93_19540 PF03190 Protein of unknown function, DUF255 KHS93_19545 PF02517 CPBP intramembrane metalloprotease KHS93_19550 PF00083 Sugar (and other) transporter KHS93_19555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KHS93_19560 PF00356 Bacterial regulatory proteins, lacI family KHS93_19560 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KHS93_19565 PF03372 Endonuclease/Exonuclease/phosphatase family KHS93_19570 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KHS93_19570 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KHS93_19575 PF02805 Metal binding domain of Ada KHS93_19575 PF12833 Helix-turn-helix domain KHS93_19580 PF01084 Ribosomal protein S18 KHS93_19585 PF00436 Single-strand binding protein family KHS93_19590 PF01250 Ribosomal protein S6 KHS93_19595 PF06071 Protein of unknown function (DUF933) KHS93_19595 PF01926 50S ribosome-binding GTPase KHS93_19600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KHS93_19600 PF00384 Molybdopterin oxidoreductase KHS93_19600 PF01568 Molydopterin dinucleotide binding domain KHS93_19605 PF06107 Bacterial protein of unknown function (DUF951) KHS93_19620 PF06866 Protein of unknown function (DUF1256) KHS93_19625 PF17762 HTH domain found in ParB protein KHS93_19625 PF02195 ParB-like nuclease domain KHS93_19630 PF13614 AAA domain KHS93_19635 PF02195 ParB-like nuclease domain KHS93_19635 PF17762 HTH domain found in ParB protein KHS93_19640 PF02527 rRNA small subunit methyltransferase G KHS93_19645 PF01134 Glucose inhibited division protein A KHS93_19645 PF13932 GidA associated domain KHS93_19650 PF01926 50S ribosome-binding GTPase KHS93_19650 PF12631 MnmE helical domain KHS93_19650 PF10396 GTP-binding protein TrmE N-terminus KHS93_19655 PF01424 R3H domain KHS93_19655 PF14804 Jag N-terminus KHS93_19660 PF02096 60Kd inner membrane protein KHS93_19665 PF00825 Ribonuclease P KHS93_19670 PF00468 Ribosomal protein L34