locus-tag class description LT978_00005 PF00308 Bacterial dnaA protein LT978_00005 PF08299 Bacterial dnaA protein helix-turn-helix LT978_00005 PF11638 DnaA N-terminal domain LT978_00010 PF00468 Ribosomal protein L34 LT978_00015 PF00825 Ribonuclease P LT978_00020 PF02096 60Kd inner membrane protein LT978_00025 PF14804 Jag N-terminus LT978_00025 PF01424 R3H domain LT978_00030 PF12631 MnmE helical domain LT978_00030 PF10396 GTP-binding protein TrmE N-terminus LT978_00030 PF01926 50S ribosome-binding GTPase LT978_00035 PF01134 Glucose inhibited division protein A LT978_00035 PF13932 GidA associated domain LT978_00040 PF02527 rRNA small subunit methyltransferase G LT978_00045 PF17762 HTH domain found in ParB protein LT978_00045 PF02195 ParB-like nuclease domain LT978_00050 PF13614 AAA domain LT978_00055 PF17762 HTH domain found in ParB protein LT978_00055 PF02195 ParB-like nuclease domain LT978_00060 PF06866 Protein of unknown function (DUF1256) LT978_00075 PF06107 Bacterial protein of unknown function (DUF951) LT978_00080 PF00384 Molybdopterin oxidoreductase LT978_00080 PF01568 Molydopterin dinucleotide binding domain LT978_00080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LT978_00085 PF01926 50S ribosome-binding GTPase LT978_00085 PF06071 Protein of unknown function (DUF933) LT978_00090 PF01250 Ribosomal protein S6 LT978_00095 PF00436 Single-strand binding protein family LT978_00100 PF01084 Ribosomal protein S18 LT978_00105 PF02805 Metal binding domain of Ada LT978_00105 PF12833 Helix-turn-helix domain LT978_00110 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LT978_00110 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LT978_00115 PF03372 Endonuclease/Exonuclease/phosphatase family LT978_00120 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LT978_00120 PF00356 Bacterial regulatory proteins, lacI family LT978_00125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LT978_00130 PF00083 Sugar (and other) transporter LT978_00135 PF02517 CPBP intramembrane metalloprotease LT978_00145 PF04474 Protein of unknown function (DUF554) LT978_00150 PF06445 GyrI-like small molecule binding domain LT978_00150 PF13411 MerR HTH family regulatory protein LT978_00160 PF00892 EamA-like transporter family LT978_00165 PF00155 Aminotransferase class I and II LT978_00165 PF00392 Bacterial regulatory proteins, gntR family LT978_00175 PF03466 LysR substrate binding domain LT978_00175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_00195 PF01047 MarR family LT978_00200 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LT978_00200 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LT978_00205 PF01047 MarR family LT978_00210 PF00881 Nitroreductase family LT978_00220 PF07690 Major Facilitator Superfamily LT978_00225 PF05163 DinB family LT978_00230 PF00392 Bacterial regulatory proteins, gntR family LT978_00230 PF07729 FCD domain LT978_00235 PF08244 Glycosyl hydrolases family 32 C terminal LT978_00235 PF00251 Glycosyl hydrolases family 32 N-terminal domain LT978_00240 PF02435 Levansucrase/Invertase LT978_00245 PF00892 EamA-like transporter family LT978_00250 PF02833 DHHA2 domain LT978_00250 PF01368 DHH family LT978_00255 PF01638 HxlR-like helix-turn-helix LT978_00260 PF07875 Coat F domain LT978_00270 PF09991 Predicted membrane protein (DUF2232) LT978_00275 PF02272 DHHA1 domain LT978_00275 PF01368 DHH family LT978_00280 PF01281 Ribosomal protein L9, N-terminal domain LT978_00280 PF03948 Ribosomal protein L9, C-terminal domain LT978_00295 PF13439 Glycosyltransferase Family 4 LT978_00295 PF00534 Glycosyl transferases group 1 LT978_00300 PF02222 ATP-grasp domain LT978_00310 PF13439 Glycosyltransferase Family 4 LT978_00310 PF00534 Glycosyl transferases group 1 LT978_00315 PF14174 YycC-like protein LT978_00325 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) LT978_00330 PF00772 DnaB-like helicase N terminal domain LT978_00330 PF03796 DnaB-like helicase C terminal domain LT978_00335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LT978_00340 PF00709 Adenylosuccinate synthetase LT978_00365 PF00486 Transcriptional regulatory protein, C terminal LT978_00365 PF00072 Response regulator receiver domain LT978_00370 PF13426 PAS domain LT978_00370 PF00512 His Kinase A (phospho-acceptor) domain LT978_00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_00370 PF00672 HAMP domain LT978_00375 PF07435 YycH protein LT978_00380 PF09648 YycH protein LT978_00385 PF00753 Metallo-beta-lactamase superfamily LT978_00390 PF13180 PDZ domain LT978_00395 PF00072 Response regulator receiver domain LT978_00395 PF00486 Transcriptional regulatory protein, C terminal LT978_00400 PF00512 His Kinase A (phospho-acceptor) domain LT978_00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_00400 PF16736 Single Cache-like LT978_00400 PF00989 PAS fold LT978_00405 PF00899 ThiF family LT978_00420 PF00005 ABC transporter LT978_00420 PF16326 ABC transporter C-terminal domain LT978_00420 PF12848 ABC transporter LT978_00430 PF13426 PAS domain LT978_00430 PF02954 Bacterial regulatory protein, Fis family LT978_00430 PF00158 Sigma-54 interaction domain LT978_00435 PF01022 Bacterial regulatory protein, arsR family LT978_00440 PF13630 SdpI/YhfL protein family LT978_00440 PF07853 Protein of unknown function (DUF1648) LT978_00445 PF00202 Aminotransferase class-III LT978_00450 PF00324 Amino acid permease LT978_00455 PF00491 Arginase family LT978_00460 PF18801 response regulator aspartate phosphatase H, N terminal LT978_00465 PF00583 Acetyltransferase (GNAT) family LT978_00470 PF00248 Aldo/keto reductase family LT978_00490 PF14116 YyzF-like protein LT978_00495 PF02590 Predicted SPOUT methyltransferase LT978_00520 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 LT978_00520 PF09000 Cytotoxic LT978_00520 PF03515 Colicin-like bacteriocin tRNase domain LT978_00540 PF13478 XdhC Rossmann domain LT978_00540 PF02625 XdhC and CoxI family LT978_00545 PF12804 MobA-like NTP transferase domain LT978_00550 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LT978_00550 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LT978_00550 PF00111 2Fe-2S iron-sulfur cluster binding domain LT978_00550 PF01799 [2Fe-2S] binding domain LT978_00560 PF00111 2Fe-2S iron-sulfur cluster binding domain LT978_00560 PF01799 [2Fe-2S] binding domain LT978_00565 PF06874 Firmicute fructose-1,6-bisphosphatase LT978_00570 PF00324 Amino acid permease LT978_00575 PF02661 Fic/DOC family LT978_00575 PF13784 Fic/DOC family N-terminal LT978_00580 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT978_00580 PF13192 Thioredoxin domain LT978_00585 PF00578 AhpC/TSA family LT978_00595 PF06271 RDD family LT978_00600 PF07690 Major Facilitator Superfamily LT978_00610 PF17369 Family of unknown function (DUF5391) LT978_00615 PF13360 PQQ-like domain LT978_00615 PF13570 PQQ-like domain LT978_00615 PF01011 PQQ enzyme repeat LT978_00620 PF00171 Aldehyde dehydrogenase family LT978_00625 PF00440 Bacterial regulatory proteins, tetR family LT978_00630 PF00487 Fatty acid desaturase LT978_00635 PF07730 Histidine kinase LT978_00640 PF00196 Bacterial regulatory proteins, luxR family LT978_00640 PF00072 Response regulator receiver domain LT978_00655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_00655 PF00183 Hsp90 protein LT978_00660 PF00083 Sugar (and other) transporter LT978_00665 PF00248 Aldo/keto reductase family LT978_00670 PF00455 DeoR C terminal sensor domain LT978_00670 PF08220 DeoR-like helix-turn-helix domain LT978_00675 PF00171 Aldehyde dehydrogenase family LT978_00680 PF04962 KduI/IolB family LT978_00685 PF00294 pfkB family carbohydrate kinase LT978_00690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LT978_00690 PF00205 Thiamine pyrophosphate enzyme, central domain LT978_00690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LT978_00695 PF01261 Xylose isomerase-like TIM barrel LT978_00700 PF07690 Major Facilitator Superfamily LT978_00705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LT978_00705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LT978_00710 PF01261 Xylose isomerase-like TIM barrel LT978_00715 PF01261 Xylose isomerase-like TIM barrel LT978_00720 PF01116 Fructose-bisphosphate aldolase class-II LT978_00725 PF00486 Transcriptional regulatory protein, C terminal LT978_00725 PF00072 Response regulator receiver domain LT978_00730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_00735 PF00005 ABC transporter LT978_00740 PF02687 FtsX-like permease family LT978_00745 PF06486 Protein of unknown function (DUF1093) LT978_00750 PF01497 Periplasmic binding protein LT978_00770 PF11631 Protein of unknown function (DUF3255) LT978_00785 PF04198 Putative sugar-binding domain LT978_00790 PF01791 DeoC/LacD family aldolase LT978_00795 PF01773 Na+ dependent nucleoside transporter N-terminus LT978_00795 PF07662 Na+ dependent nucleoside transporter C-terminus LT978_00800 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LT978_00800 PF00591 Glycosyl transferase family, a/b domain LT978_00800 PF02885 Glycosyl transferase family, helical bundle domain LT978_00805 PF00324 Amino acid permease LT978_00810 PF00491 Arginase family LT978_00815 PF01979 Amidohydrolase family LT978_00820 PF17391 Urocanase N-terminal domain LT978_00820 PF01175 Urocanase Rossmann-like domain LT978_00820 PF17392 Urocanase C-terminal domain LT978_00825 PF00221 Aromatic amino acid lyase LT978_00830 PF09021 HutP LT978_00835 PF04616 Glycosyl hydrolases family 43 LT978_00835 PF16369 C-terminal lipocalin-like domain LT978_00840 PF00293 NUDIX domain LT978_00850 PF00582 Universal stress protein family LT978_00855 PF00892 EamA-like transporter family LT978_00860 PF00544 Pectate lyase LT978_00865 PF05593 RHS Repeat LT978_00915 PF14176 YxiJ-like protein LT978_00925 PF10898 Protein of unknown function (DUF2716) LT978_00945 PF00271 Helicase conserved C-terminal domain LT978_00945 PF00270 DEAD/DEAH box helicase LT978_00945 PF03880 DbpA RNA binding domain LT978_00950 PF11700 Vacuole effluxer Atg22 like LT978_00960 PF00722 Glycosyl hydrolases family 16 LT978_00965 PF03600 Citrate transporter LT978_00970 PF18011 C-terminal domain found in long catalases LT978_00970 PF00199 Catalase LT978_00970 PF06628 Catalase-related immune-responsive LT978_00985 PF01773 Na+ dependent nucleoside transporter N-terminus LT978_00985 PF07662 Na+ dependent nucleoside transporter C-terminus LT978_00990 PF08241 Methyltransferase domain LT978_00995 PF01717 Cobalamin-independent synthase, Catalytic domain LT978_01000 PF04525 LURP-one-related LT978_01010 PF01546 Peptidase family M20/M25/M40 LT978_01010 PF07687 Peptidase dimerisation domain LT978_01015 PF16363 GDP-mannose 4,6 dehydratase LT978_01020 PF11611 Domain of unknown function (DUF4352) LT978_01025 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LT978_01025 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LT978_01030 PF13556 PucR C-terminal helix-turn-helix domain LT978_01035 PF00005 ABC transporter LT978_01035 PF17912 MalK OB fold domain LT978_01035 PF03459 TOBE domain LT978_01040 PF01522 Polysaccharide deacetylase LT978_01045 PF03390 2-hydroxycarboxylate transporter family LT978_01050 PF01654 Cytochrome bd terminal oxidase subunit I LT978_01055 PF02322 Cytochrome bd terminal oxidase subunit II LT978_01060 PF00005 ABC transporter LT978_01060 PF00664 ABC transporter transmembrane region LT978_01065 PF00005 ABC transporter LT978_01065 PF00664 ABC transporter transmembrane region LT978_01070 PF01256 Carbohydrate kinase LT978_01075 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LT978_01080 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LT978_01085 PF06628 Catalase-related immune-responsive LT978_01085 PF00199 Catalase LT978_01090 PF02156 Glycosyl hydrolase family 26 LT978_01095 PF01238 Phosphomannose isomerase type I LT978_01100 PF00480 ROK family LT978_01105 PF00232 Glycosyl hydrolase family 1 LT978_01110 PF02378 Phosphotransferase system, EIIC LT978_01115 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LT978_01120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LT978_01125 PF02040 Arsenical pump membrane protein LT978_01130 PF01022 Bacterial regulatory protein, arsR family LT978_01140 PF01032 FecCD transport family LT978_01145 PF01032 FecCD transport family LT978_01150 PF02245 Methylpurine-DNA glycosylase (MPG) LT978_01155 PF00874 PRD domain LT978_01155 PF05043 Mga helix-turn-helix domain LT978_01155 PF08279 HTH domain LT978_01155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LT978_01160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LT978_01165 PF02378 Phosphotransferase system, EIIC LT978_01170 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LT978_01175 PF11975 Family 4 glycosyl hydrolase C-terminal domain LT978_01175 PF02056 Family 4 glycosyl hydrolase LT978_01180 PF01063 Amino-transferase class IV LT978_01185 PF04914 DltD protein LT978_01190 PF00550 Phosphopantetheine attachment site LT978_01195 PF03062 MBOAT, membrane-bound O-acyltransferase family LT978_01200 PF00501 AMP-binding enzyme LT978_01200 PF13193 AMP-binding enzyme C-terminal domain LT978_01205 PF12459 D-Ala-teichoic acid biosynthesis protein LT978_01210 PF01040 UbiA prenyltransferase family LT978_01215 PF04607 Region found in RelA / SpoT proteins LT978_01220 PF01501 Glycosyl transferase family 8 LT978_01225 PF00082 Subtilase family LT978_01230 PF02378 Phosphotransferase system, EIIC LT978_01235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LT978_01240 PF10672 S-adenosylmethionine-dependent methyltransferase LT978_01240 PF17785 PUA-like domain LT978_01245 PF13411 MerR HTH family regulatory protein LT978_01245 PF07739 TipAS antibiotic-recognition domain LT978_01250 PF09962 Uncharacterized conserved protein (DUF2196) LT978_01255 PF04172 LrgB-like family LT978_01260 PF03788 LrgA family LT978_01265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_01265 PF03466 LysR substrate binding domain LT978_01270 PF02110 Hydroxyethylthiazole kinase family LT978_01275 PF02581 Thiamine monophosphate synthase LT978_01285 PF10518 TAT (twin-arginine translocation) pathway signal sequence LT978_01285 PF04261 Dyp-type peroxidase family LT978_01290 PF01323 DSBA-like thioredoxin domain LT978_01305 PF08671 Anti-repressor SinI LT978_01310 PF00440 Bacterial regulatory proteins, tetR family LT978_01315 PF04138 GtrA-like protein LT978_01325 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LT978_01325 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LT978_01330 PF04226 Transglycosylase associated protein LT978_01335 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LT978_01335 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LT978_01340 PF00115 Cytochrome C and Quinol oxidase polypeptide I LT978_01345 PF00510 Cytochrome c oxidase subunit III LT978_01350 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LT978_01355 PF17368 Spore morphogenesis and germination YwcE LT978_01360 PF00583 Acetyltransferase (GNAT) family LT978_01365 PF01098 Cell cycle protein LT978_01370 PF00881 Nitroreductase family LT978_01375 PF00296 Luciferase-like monooxygenase LT978_01380 PF00082 Subtilase family LT978_01380 PF13860 FlgD Ig-like domain LT978_01380 PF05922 Peptidase inhibitor I9 LT978_01380 PF02225 PA domain LT978_01390 PF03123 CAT RNA binding domain LT978_01390 PF00874 PRD domain LT978_01395 PF02378 Phosphotransferase system, EIIC LT978_01395 PF00367 phosphotransferase system, EIIB LT978_01400 PF00251 Glycosyl hydrolases family 32 N-terminal domain LT978_01400 PF08244 Glycosyl hydrolases family 32 C terminal LT978_01410 PF08543 Phosphomethylpyrimidine kinase LT978_01415 PF03551 Transcriptional regulator PadR-like family LT978_01430 PF00535 Glycosyl transferase family 2 LT978_01435 PF03167 Uracil DNA glycosylase superfamily LT978_01440 PF17261 Family of unknown function (DUF5327) LT978_01445 PF00860 Permease family LT978_01450 PF04241 Protein of unknown function (DUF423) LT978_01455 PF09671 Spore coat protein (Spore_GerQ) LT978_01460 PF00535 Glycosyl transferase family 2 LT978_01465 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LT978_01470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LT978_01475 PF00583 Acetyltransferase (GNAT) family LT978_01480 PF08666 SAF domain LT978_01480 PF03102 NeuB family LT978_01485 PF02348 Cytidylyltransferase LT978_01490 PF04101 Glycosyltransferase family 28 C-terminal domain LT978_01495 PF00483 Nucleotidyl transferase LT978_01500 PF16363 GDP-mannose 4,6 dehydratase LT978_01505 PF04321 RmlD substrate binding domain LT978_01510 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LT978_01515 PF17735 Biofilm surface layer A LT978_01520 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LT978_01520 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LT978_01525 PF00171 Aldehyde dehydrogenase family LT978_01530 PF01546 Peptidase family M20/M25/M40 LT978_01535 PF00324 Amino acid permease LT978_01540 PF07690 Major Facilitator Superfamily LT978_01545 PF07690 Major Facilitator Superfamily LT978_01555 PF07883 Cupin domain LT978_01570 PF07690 Major Facilitator Superfamily LT978_01575 PF00155 Aminotransferase class I and II LT978_01585 PF06778 Chlorite dismutase LT978_01590 PF01515 Phosphate acetyl/butaryl transferase LT978_01595 PF03601 Conserved hypothetical protein 698 LT978_01600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_01600 PF03466 LysR substrate binding domain LT978_01605 PF03099 Biotin/lipoate A/B protein ligase family LT978_01630 PF12679 ABC-2 family transporter protein LT978_01635 PF00005 ABC transporter LT978_01645 PF03551 Transcriptional regulator PadR-like family LT978_01655 PF07293 Protein of unknown function (DUF1450) LT978_01660 PF01966 HD domain LT978_01670 PF13520 Amino acid permease LT978_01675 PF01047 MarR family LT978_01680 PF01361 Tautomerase enzyme LT978_01685 PF02163 Peptidase family M50 LT978_01690 PF08741 YwhD family LT978_01700 PF00912 Transglycosylase LT978_01700 PF00905 Penicillin binding protein transpeptidase domain LT978_01705 PF17284 Spermidine synthase tetramerisation domain LT978_01710 PF00491 Arginase family LT978_01745 PF11131 Rap-phr extracellular signalling LT978_01750 PF18801 response regulator aspartate phosphatase H, N terminal LT978_01755 PF09148 Domain of unknown function (DUF1934) LT978_01760 PF03485 Arginyl tRNA synthetase N terminal domain LT978_01760 PF05746 DALR anticodon binding domain LT978_01760 PF00750 tRNA synthetases class I (R) LT978_01765 PF07690 Major Facilitator Superfamily LT978_01770 PF00027 Cyclic nucleotide-binding domain LT978_01770 PF00325 Bacterial regulatory proteins, crp family LT978_01775 PF14256 YwiC-like protein LT978_01785 PF00384 Molybdopterin oxidoreductase LT978_01785 PF01568 Molydopterin dinucleotide binding domain LT978_01785 PF14710 Respiratory nitrate reductase alpha N-terminal LT978_01790 PF13247 4Fe-4S dicluster domain LT978_01790 PF14711 Respiratory nitrate reductase beta C-terminal LT978_01795 PF02613 Nitrate reductase delta subunit LT978_01800 PF02665 Nitrate reductase gamma subunit LT978_01810 PF13091 PLD-like domain LT978_01810 PF13396 Phospholipase_D-nuclease N-terminal LT978_01815 PF00664 ABC transporter transmembrane region LT978_01815 PF00005 ABC transporter LT978_01825 PF03851 UV-endonuclease UvdE LT978_01830 PF13091 PLD-like domain LT978_01835 PF02754 Cysteine-rich domain LT978_01835 PF13183 4Fe-4S dicluster domain LT978_01840 PF05066 HB1, ASXL, restriction endonuclease HTH domain LT978_01845 PF06418 CTP synthase N-terminus LT978_01845 PF00117 Glutamine amidotransferase class-I LT978_01850 PF10740 Domain of unknown function (DUF2529) LT978_01855 PF00072 Response regulator receiver domain LT978_01860 PF01116 Fructose-bisphosphate aldolase class-II LT978_01865 PF00923 Transaldolase/Fructose-6-phosphate aldolase LT978_01870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LT978_01875 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LT978_01885 PF07497 Rho termination factor, RNA-binding domain LT978_01885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LT978_01885 PF07498 Rho termination factor, N-terminal domain LT978_01890 PF01197 Ribosomal protein L31 LT978_01895 PF00265 Thymidine kinase LT978_01900 PF00390 Malic enzyme, N-terminal domain LT978_01900 PF03949 Malic enzyme, NAD binding domain LT978_01905 PF03547 Membrane transport protein LT978_01910 PF13411 MerR HTH family regulatory protein LT978_01915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LT978_01920 PF00472 RF-1 domain LT978_01920 PF03462 PCRF domain LT978_01925 PF17827 PrmC N-terminal domain LT978_01925 PF05175 Methyltransferase small domain LT978_01930 PF17247 Family of unknown function (DUF5316) LT978_01935 PF17094 Uncharacterised protein family (UPF0715) LT978_01940 PF09551 Stage II sporulation protein R (spore_II_R) LT978_01950 PF03481 Putative GTP-binding controlling metal-binding LT978_01950 PF01300 Telomere recombination LT978_01955 PF02659 Putative manganese efflux pump LT978_01960 PF01451 Low molecular weight phosphotyrosine protein phosphatase LT978_01965 PF02502 Ribose/Galactose Isomerase LT978_01970 PF04260 Protein of unknown function (DUF436) LT978_01975 PF00464 Serine hydroxymethyltransferase LT978_01985 PF03899 ATP synthase I chain LT978_01990 PF00119 ATP synthase A chain LT978_01995 PF00137 ATP synthase subunit C LT978_02000 PF00430 ATP synthase B/B' CF(0) LT978_02005 PF00213 ATP synthase delta (OSCP) subunit LT978_02010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LT978_02010 PF00306 ATP synthase alpha/beta chain, C terminal domain LT978_02010 PF02874 ATP synthase alpha/beta family, beta-barrel domain LT978_02015 PF00231 ATP synthase LT978_02020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LT978_02020 PF02874 ATP synthase alpha/beta family, beta-barrel domain LT978_02025 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LT978_02025 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LT978_02035 PF06612 Protein of unknown function (DUF1146) LT978_02040 PF08680 TATA-box binding LT978_02045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LT978_02050 PF08486 Stage II sporulation protein LT978_02055 PF00092 von Willebrand factor type A domain LT978_02060 PF00092 von Willebrand factor type A domain LT978_02070 PF02634 FdhD/NarQ family LT978_02075 PF06463 Molybdenum Cofactor Synthesis C LT978_02075 PF04055 Radical SAM superfamily LT978_02080 PF18801 response regulator aspartate phosphatase H, N terminal LT978_02080 PF17874 MalT-like TPR region LT978_02090 PF05532 CsbD-like LT978_02095 PF00547 Urease, gamma subunit LT978_02100 PF00699 Urease beta subunit LT978_02105 PF01979 Amidohydrolase family LT978_02105 PF00449 Urease alpha-subunit, N-terminal domain LT978_02110 PF02082 Transcriptional regulator LT978_02115 PF00457 Glycosyl hydrolases family 11 LT978_02120 PF17319 Family of unknown function (DUF5362) LT978_02125 PF13091 PLD-like domain LT978_02125 PF13396 Phospholipase_D-nuclease N-terminal LT978_02130 PF17370 Family of unknown function (DUF5392) LT978_02135 PF17319 Family of unknown function (DUF5362) LT978_02140 PF00583 Acetyltransferase (GNAT) family LT978_02145 PF01551 Peptidase family M23 LT978_02150 PF04892 VanZ like family LT978_02155 PF01569 PAP2 superfamily LT978_02160 PF01098 Cell cycle protein LT978_02165 PF00543 Nitrogen regulatory protein P-II LT978_02170 PF00909 Ammonium Transporter Family LT978_02175 PF00857 Isochorismatase family LT978_02180 PF07690 Major Facilitator Superfamily LT978_02185 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LT978_02190 PF07690 Major Facilitator Superfamily LT978_02195 PF01047 MarR family LT978_02200 PF12116 Stage III sporulation protein D LT978_02210 PF00460 Flagella basal body rod protein LT978_02210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LT978_02215 PF00460 Flagella basal body rod protein LT978_02215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LT978_02220 PF18801 response regulator aspartate phosphatase H, N terminal LT978_02225 PF07977 FabA-like domain LT978_02230 PF01741 Large-conductance mechanosensitive channel, MscL LT978_02235 PF14183 YwpF-like protein LT978_02245 PF00436 Single-strand binding protein family LT978_02250 PF00455 DeoR C terminal sensor domain LT978_02250 PF08220 DeoR-like helix-turn-helix domain LT978_02260 PF12419 SNF2 Helicase protein LT978_02260 PF00271 Helicase conserved C-terminal domain LT978_02260 PF00176 SNF2 family N-terminal domain LT978_02265 PF04434 SWIM zinc finger LT978_02275 PF02706 Chain length determinant protein LT978_02275 PF13807 G-rich domain on putative tyrosine kinase LT978_02280 PF13614 AAA domain LT978_02290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LT978_02290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LT978_02290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LT978_02295 PF09234 Domain of unknown function (DUF1963) LT978_02300 PF16888 Domain of unknown function (DUF5082) LT978_02310 PF14431 YwqJ-like deaminase LT978_02310 PF14449 Pre-toxin TG LT978_02310 PF04740 LXG domain of WXG superfamily LT978_02330 PF04493 Endonuclease V LT978_02335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_02335 PF03466 LysR substrate binding domain LT978_02340 PF03358 NADPH-dependent FMN reductase LT978_02350 PF02417 Chromate transporter LT978_02355 PF02417 Chromate transporter LT978_02360 PF01037 Lrp/AsnC ligand binding domain LT978_02360 PF13404 AsnC-type helix-turn-helix domain LT978_02375 PF01613 Flavin reductase like domain LT978_02385 PF08757 CotH kinase protein LT978_02400 PF02040 Arsenical pump membrane protein LT978_02405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_02405 PF03466 LysR substrate binding domain LT978_02410 PF00205 Thiamine pyrophosphate enzyme, central domain LT978_02410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LT978_02410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LT978_02415 PF03306 Alpha-acetolactate decarboxylase LT978_02420 PF02525 Flavodoxin-like fold LT978_02425 PF08239 Bacterial SH3 domain LT978_02430 PF13407 Periplasmic binding protein domain LT978_02435 PF02653 Branched-chain amino acid transport system / permease component LT978_02440 PF00005 ABC transporter LT978_02445 PF05025 RbsD / FucU transport protein family LT978_02450 PF00294 pfkB family carbohydrate kinase LT978_02455 PF00356 Bacterial regulatory proteins, lacI family LT978_02465 PF03845 Spore germination protein LT978_02470 PF03323 Bacillus/Clostridium GerA spore germination protein LT978_02475 PF08245 Mur ligase middle domain LT978_02480 PF14102 Capsule biosynthesis CapC LT978_02485 PF09587 Bacterial capsule synthesis protein PGA_cap LT978_02495 PF00877 NlpC/P60 family LT978_02500 PF04791 LMBR1-like membrane protein LT978_02510 PF03816 Cell envelope-related transcriptional attenuator domain LT978_02515 PF00083 Sugar (and other) transporter LT978_02525 PF05504 Spore germination B3/ GerAC like, C-terminal LT978_02530 PF03845 Spore germination protein LT978_02535 PF03323 Bacillus/Clostridium GerA spore germination protein LT978_02540 PF01238 Phosphomannose isomerase type I LT978_02545 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LT978_02545 PF08239 Bacterial SH3 domain LT978_02545 PF05036 Sporulation related domain LT978_02550 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LT978_02555 PF03808 Glycosyl transferase WecB/TagA/CpsF family LT978_02560 PF01467 Cytidylyltransferase-like LT978_02565 PF00535 Glycosyl transferase family 2 LT978_02565 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 LT978_02570 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LT978_02575 PF01061 ABC-2 type transporter LT978_02580 PF00005 ABC transporter LT978_02585 PF00483 Nucleotidyl transferase LT978_02590 PF02350 UDP-N-acetylglucosamine 2-epimerase LT978_02595 PF03816 Cell envelope-related transcriptional attenuator domain LT978_02605 PF08486 Stage II sporulation protein LT978_02605 PF04122 Putative cell wall binding repeat 2 LT978_02610 PF01520 N-acetylmuramoyl-L-alanine amidase LT978_02610 PF04122 Putative cell wall binding repeat 2 LT978_02615 PF02397 Bacterial sugar transferase LT978_02620 PF01943 Polysaccharide biosynthesis protein LT978_02620 PF14667 Polysaccharide biosynthesis C-terminal domain LT978_02625 PF13439 Glycosyltransferase Family 4 LT978_02625 PF00534 Glycosyl transferases group 1 LT978_02630 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LT978_02630 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LT978_02630 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LT978_02635 PF04932 O-Antigen ligase LT978_02640 PF02706 Chain length determinant protein LT978_02645 PF00535 Glycosyl transferase family 2 LT978_02655 PF00953 Glycosyl transferase family 4 LT978_02660 PF03816 Cell envelope-related transcriptional attenuator domain LT978_02665 PF09186 Domain of unknown function (DUF1949) LT978_02665 PF01205 Uncharacterized protein family UPF0029 LT978_02670 PF05384 Sensor protein DegS LT978_02670 PF07730 Histidine kinase LT978_02670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_02675 PF00196 Bacterial regulatory proteins, luxR family LT978_02675 PF00072 Response regulator receiver domain LT978_02680 PF02645 Uncharacterised protein, DegV family COG1307 LT978_02685 PF00271 Helicase conserved C-terminal domain LT978_02685 PF04851 Type III restriction enzyme, res subunit LT978_02690 PF10719 Late competence development protein ComFB LT978_02705 PF04316 Anti-sigma-28 factor, FlgM LT978_02710 PF05130 FlgN protein LT978_02715 PF00460 Flagella basal body rod protein LT978_02715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LT978_02720 PF00669 Bacterial flagellin N-terminal helical region LT978_02720 PF00700 Bacterial flagellin C-terminal helical region LT978_02730 PF02623 FliW protein LT978_02735 PF02599 Global regulator protein family LT978_02740 PF00669 Bacterial flagellin N-terminal helical region LT978_02740 PF00700 Bacterial flagellin C-terminal helical region LT978_02745 PF07196 Flagellin hook IN motif LT978_02745 PF07195 Flagellar hook-associated protein 2 C-terminus LT978_02745 PF02465 Flagellar hook-associated protein 2 N-terminus LT978_02750 PF02561 Flagellar protein FliS LT978_02765 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LT978_02765 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LT978_02770 PF02810 SEC-C motif LT978_02770 PF01043 SecA preprotein cross-linking domain LT978_02770 PF07516 SecA Wing and Scaffold domain LT978_02770 PF07517 SecA DEAD-like domain LT978_02780 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LT978_02780 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LT978_02785 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LT978_02790 PF00005 ABC transporter LT978_02795 PF02687 FtsX-like permease family LT978_02795 PF18075 FtsX extracellular domain LT978_02800 PF13229 Right handed beta helix region LT978_02805 PF01471 Putative peptidoglycan binding domain LT978_02805 PF03572 Peptidase family S41 LT978_02805 PF17820 PDZ domain LT978_02810 PF17423 Swarming motility protein LT978_02815 PF17820 PDZ domain LT978_02820 PF17735 Biofilm surface layer A LT978_02825 PF07690 Major Facilitator Superfamily LT978_02830 PF00440 Bacterial regulatory proteins, tetR family LT978_02835 PF00391 PEP-utilising enzyme, mobile domain LT978_02835 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LT978_02840 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) LT978_02845 PF00271 Helicase conserved C-terminal domain LT978_02845 PF04851 Type III restriction enzyme, res subunit LT978_02845 PF12344 Ultra-violet resistance protein B LT978_02845 PF17757 UvrB interaction domain LT978_02845 PF02151 UvrB/uvrC motif LT978_02850 PF17760 UvrA interaction domain LT978_02850 PF17755 UvrA DNA-binding domain LT978_02850 PF00005 ABC transporter LT978_02865 PF13349 Putative adhesin LT978_02870 PF04024 PspC domain LT978_02875 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LT978_02880 PF00149 Calcineurin-like phosphoesterase LT978_02885 PF00440 Bacterial regulatory proteins, tetR family LT978_02890 PF07702 UTRA domain LT978_02890 PF00392 Bacterial regulatory proteins, gntR family LT978_02895 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LT978_02900 PF01979 Amidohydrolase family LT978_02905 PF02603 HPr Serine kinase N terminus LT978_02905 PF07475 HPr Serine kinase C-terminal domain LT978_02910 PF01790 Prolipoprotein diacylglyceryl transferase LT978_02915 PF13419 Haloacid dehalogenase-like hydrolase LT978_02920 PF14602 Hexapeptide repeat of succinyl-transferase LT978_02925 PF13529 Peptidase_C39 like family LT978_02930 PF13393 Histidyl-tRNA synthetase LT978_02935 PF01634 ATP phosphoribosyltransferase LT978_02940 PF00815 Histidinol dehydrogenase LT978_02945 PF00475 Imidazoleglycerol-phosphate dehydratase LT978_02950 PF00117 Glutamine amidotransferase class-I LT978_02955 PF00977 Histidine biosynthesis protein LT978_02960 PF00977 Histidine biosynthesis protein LT978_02965 PF01502 Phosphoribosyl-AMP cyclohydrolase LT978_02965 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LT978_02970 PF00664 ABC transporter transmembrane region LT978_02970 PF00005 ABC transporter LT978_02980 PF00072 Response regulator receiver domain LT978_02980 PF00486 Transcriptional regulatory protein, C terminal LT978_02985 PF00672 HAMP domain LT978_02985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_02985 PF00989 PAS fold LT978_02985 PF18698 Histidine kinase sensor domain LT978_02985 PF00512 His Kinase A (phospho-acceptor) domain LT978_02995 PF00877 NlpC/P60 family LT978_03000 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT978_03005 PF00293 NUDIX domain LT978_03010 PF03668 P-loop ATPase protein family LT978_03015 PF01933 Uncharacterised protein family UPF0052 LT978_03020 PF02650 WhiA C-terminal HTH domain LT978_03020 PF10298 WhiA N-terminal LAGLIDADG-like domain LT978_03020 PF14527 WhiA LAGLIDADG-like domain LT978_03025 PF00381 PTS HPr component phosphorylation site LT978_03030 PF00797 N-acetyltransferase LT978_03035 PF00545 ribonuclease LT978_03040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LT978_03040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LT978_03045 PF00484 Carbonic anhydrase LT978_03050 PF01740 STAS domain LT978_03050 PF00916 Sulfate permease family LT978_03055 PF03819 MazG nucleotide pyrophosphohydrolase domain LT978_03060 PF03641 Possible lysine decarboxylase LT978_03065 PF00083 Sugar (and other) transporter LT978_03070 PF04303 PrpF protein LT978_03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_03075 PF03466 LysR substrate binding domain LT978_03080 PF00574 Clp protease LT978_03085 PF00356 Bacterial regulatory proteins, lacI family LT978_03090 PF01306 LacY proton/sugar symporter LT978_03095 PF00251 Glycosyl hydrolases family 32 N-terminal domain LT978_03095 PF08244 Glycosyl hydrolases family 32 C terminal LT978_03150 PF05870 Phenolic acid decarboxylase (PAD) LT978_03155 PF00583 Acetyltransferase (GNAT) family LT978_03165 PF01872 RibD C-terminal domain LT978_03175 PF00135 Carboxylesterase family LT978_03180 PF01381 Helix-turn-helix LT978_03180 PF08671 Anti-repressor SinI LT978_03185 PF02706 Chain length determinant protein LT978_03190 PF13614 AAA domain LT978_03195 PF02719 Polysaccharide biosynthesis protein LT978_03200 PF00534 Glycosyl transferases group 1 LT978_03200 PF13439 Glycosyltransferase Family 4 LT978_03205 PF00535 Glycosyl transferase family 2 LT978_03210 PF13439 Glycosyltransferase Family 4 LT978_03210 PF00534 Glycosyl transferases group 1 LT978_03220 PF00535 Glycosyl transferase family 2 LT978_03225 PF04230 Polysaccharide pyruvyl transferase LT978_03230 PF00535 Glycosyl transferase family 2 LT978_03235 PF14667 Polysaccharide biosynthesis C-terminal domain LT978_03235 PF01943 Polysaccharide biosynthesis protein LT978_03240 PF02397 Bacterial sugar transferase LT978_03245 PF00132 Bacterial transferase hexapeptide (six repeats) LT978_03245 PF17836 PglD N-terminal domain LT978_03250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LT978_03255 PF04230 Polysaccharide pyruvyl transferase LT978_03260 PF09628 YvfG protein LT978_03265 PF04552 Sigma-54, DNA binding domain LT978_03265 PF04963 Sigma-54 factor, core binding domain LT978_03265 PF00309 Sigma-54 factor, Activator interacting domain (AID) LT978_03270 PF02652 L-lactate permease LT978_03275 PF07729 FCD domain LT978_03275 PF00392 Bacterial regulatory proteins, gntR family LT978_03280 PF00155 Aminotransferase class I and II LT978_03285 PF02754 Cysteine-rich domain LT978_03290 PF02589 LUD domain LT978_03290 PF11870 Domain of unknown function (DUF3390) LT978_03290 PF13183 4Fe-4S dicluster domain LT978_03295 PF02589 LUD domain LT978_03300 PF02447 GntP family permease LT978_03305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LT978_03305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LT978_03310 PF01418 Helix-turn-helix domain, rpiR family LT978_03310 PF01380 SIS domain LT978_03315 PF00324 Amino acid permease LT978_03320 PF00892 EamA-like transporter family LT978_03325 PF03466 LysR substrate binding domain LT978_03325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_03335 PF00296 Luciferase-like monooxygenase LT978_03340 PF00392 Bacterial regulatory proteins, gntR family LT978_03345 PF00083 Sugar (and other) transporter LT978_03350 PF04198 Putative sugar-binding domain LT978_03355 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LT978_03355 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LT978_03360 PF00162 Phosphoglycerate kinase LT978_03365 PF00121 Triosephosphate isomerase LT978_03370 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LT978_03370 PF01676 Metalloenzyme superfamily LT978_03375 PF03952 Enolase, N-terminal domain LT978_03375 PF00113 Enolase, C-terminal TIM barrel domain LT978_03380 PF04389 Peptidase family M28 LT978_03380 PF02225 PA domain LT978_03385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LT978_03385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LT978_03385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LT978_03390 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LT978_03395 PF01370 NAD dependent epimerase/dehydratase family LT978_03400 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LT978_03415 PF02585 GlcNAc-PI de-N-acetylase LT978_03430 PF00583 Acetyltransferase (GNAT) family LT978_03435 PF13240 zinc-ribbon domain LT978_03445 PF01914 MarC family integral membrane protein LT978_03450 PF12802 MarR family LT978_03455 PF00005 ABC transporter LT978_03455 PF00571 CBS domain LT978_03460 PF00528 Binding-protein-dependent transport system inner membrane component LT978_03465 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LT978_03470 PF00528 Binding-protein-dependent transport system inner membrane component LT978_03475 PF12802 MarR family LT978_03480 PF00571 CBS domain LT978_03480 PF00005 ABC transporter LT978_03485 PF00528 Binding-protein-dependent transport system inner membrane component LT978_03490 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LT978_03495 PF00528 Binding-protein-dependent transport system inner membrane component LT978_03500 PF00005 ABC transporter LT978_03515 PF00072 Response regulator receiver domain LT978_03515 PF00486 Transcriptional regulatory protein, C terminal LT978_03520 PF00512 His Kinase A (phospho-acceptor) domain LT978_03520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_03525 PF01638 HxlR-like helix-turn-helix LT978_03540 PF01381 Helix-turn-helix LT978_03545 PF03840 Preprotein translocase SecG subunit LT978_03550 PF12146 Serine aminopeptidase, S33 LT978_03555 PF00575 S1 RNA binding domain LT978_03555 PF08206 Ribonuclease B OB domain LT978_03555 PF17876 Cold shock domain LT978_03555 PF00773 RNB domain LT978_03560 PF01668 SmpB protein LT978_03575 PF01337 Barstar (barnase inhibitor) LT978_03580 PF00106 short chain dehydrogenase LT978_03585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_03585 PF03466 LysR substrate binding domain LT978_03590 PF00583 Acetyltransferase (GNAT) family LT978_03595 PF00497 Bacterial extracellular solute-binding proteins, family 3 LT978_03600 PF00497 Bacterial extracellular solute-binding proteins, family 3 LT978_03605 PF00528 Binding-protein-dependent transport system inner membrane component LT978_03610 PF00528 Binding-protein-dependent transport system inner membrane component LT978_03615 PF00005 ABC transporter LT978_03620 PF00296 Luciferase-like monooxygenase LT978_03625 PF00462 Glutaredoxin LT978_03630 PF00296 Luciferase-like monooxygenase LT978_03645 PF07690 Major Facilitator Superfamily LT978_03655 PF02525 Flavodoxin-like fold LT978_03660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LT978_03660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LT978_03665 PF02583 Metal-sensitive transcriptional repressor LT978_03670 PF00403 Heavy-metal-associated domain LT978_03675 PF00403 Heavy-metal-associated domain LT978_03680 PF00403 Heavy-metal-associated domain LT978_03685 PF13462 Thioredoxin LT978_03690 PF02600 Disulfide bond formation protein DsbB LT978_03700 PF03458 UPF0126 domain LT978_03705 PF13538 UvrD-like helicase C-terminal domain LT978_03710 PF00258 Flavodoxin LT978_03710 PF00175 Oxidoreductase NAD-binding domain LT978_03710 PF00667 FAD binding domain LT978_03715 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LT978_03715 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LT978_03720 PF00999 Sodium/hydrogen exchanger family LT978_03730 PF00248 Aldo/keto reductase family LT978_03745 PF00005 ABC transporter LT978_03750 PF00672 HAMP domain LT978_03750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_03750 PF07730 Histidine kinase LT978_03750 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LT978_03755 PF00196 Bacterial regulatory proteins, luxR family LT978_03755 PF00072 Response regulator receiver domain LT978_03760 PF00528 Binding-protein-dependent transport system inner membrane component LT978_03770 PF12728 Helix-turn-helix domain LT978_03770 PF12727 PBP superfamily domain LT978_03775 PF00884 Sulfatase LT978_03780 PF04307 LexA-binding, inner membrane-associated putative hydrolase LT978_03785 PF09575 Small spore protein J (Spore_SspJ) LT978_03790 PF13520 Amino acid permease LT978_03795 PF04072 Leucine carboxyl methyltransferase LT978_03800 PF01497 Periplasmic binding protein LT978_03805 PF01032 FecCD transport family LT978_03810 PF01032 FecCD transport family LT978_03815 PF00005 ABC transporter LT978_03820 PF14184 Regulatory protein YrvL LT978_03825 PF00190 Cupin LT978_03830 PF12841 YvrJ protein family LT978_03835 PF04545 Sigma-70, region 4 LT978_03845 PF00072 Response regulator receiver domain LT978_03845 PF00486 Transcriptional regulatory protein, C terminal LT978_03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_03850 PF00512 His Kinase A (phospho-acceptor) domain LT978_03855 PF08450 SMP-30/Gluconolactonase/LRE-like region LT978_03860 PF00106 short chain dehydrogenase LT978_03865 PF01497 Periplasmic binding protein LT978_03870 PF01032 FecCD transport family LT978_03875 PF00005 ABC transporter LT978_03880 PF01923 Cobalamin adenosyltransferase LT978_03885 PF07690 Major Facilitator Superfamily LT978_03895 PF04012 PspA/IM30 family LT978_03900 PF13349 Putative adhesin LT978_03905 PF09922 Cell wall-active antibiotics response 4TMS YvqF LT978_03910 PF00672 HAMP domain LT978_03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_03910 PF07730 Histidine kinase LT978_03915 PF00196 Bacterial regulatory proteins, luxR family LT978_03915 PF00072 Response regulator receiver domain LT978_03920 PF05504 Spore germination B3/ GerAC like, C-terminal LT978_03925 PF03845 Spore germination protein LT978_03930 PF03323 Bacillus/Clostridium GerA spore germination protein LT978_03935 PF13113 Protein of unknown function (DUF3970) LT978_03940 PF10415 Fumarase C C-terminus LT978_03940 PF00206 Lyase LT978_03945 PF00440 Bacterial regulatory proteins, tetR family LT978_03955 PF00512 His Kinase A (phospho-acceptor) domain LT978_03955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_03955 PF00672 HAMP domain LT978_03960 PF00072 Response regulator receiver domain LT978_03960 PF00486 Transcriptional regulatory protein, C terminal LT978_03965 PF13180 PDZ domain LT978_03970 PF00210 Ferritin-like domain LT978_03975 PF00106 short chain dehydrogenase LT978_03985 PF14039 YusW-like protein LT978_03990 PF00005 ABC transporter LT978_04005 PF06314 Acetoacetate decarboxylase (ADC) LT978_04010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_04010 PF03466 LysR substrate binding domain LT978_04015 PF07690 Major Facilitator Superfamily LT978_04020 PF01047 MarR family LT978_04025 PF07875 Coat F domain LT978_04035 PF01619 Proline dehydrogenase LT978_04040 PF14115 YuzL-like protein LT978_04045 PF00378 Enoyl-CoA hydratase/isomerase LT978_04045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LT978_04045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LT978_04050 PF02803 Thiolase, C-terminal domain LT978_04050 PF00108 Thiolase, N-terminal domain LT978_04055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LT978_04055 PF02770 Acyl-CoA dehydrogenase, middle domain LT978_04055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LT978_04060 PF03960 ArsC family LT978_04065 PF01597 Glycine cleavage H-protein LT978_04070 PF10830 Protein of unknown function (DUF2553) LT978_04075 PF01751 Toprim domain LT978_04080 PF00085 Thioredoxin LT978_04085 PF02036 SCP-2 sterol transfer family LT978_04090 PF09383 NIL domain LT978_04090 PF00005 ABC transporter LT978_04095 PF00528 Binding-protein-dependent transport system inner membrane component LT978_04100 PF03180 NLPA lipoprotein LT978_04105 PF02627 Carboxymuconolactone decarboxylase family LT978_04115 PF00005 ABC transporter LT978_04120 PF01458 Uncharacterized protein family (UPF0051) LT978_04125 PF00266 Aminotransferase class-V LT978_04130 PF01592 NifU-like N terminal domain LT978_04135 PF01458 Uncharacterized protein family (UPF0051) LT978_04140 PF01374 Glycosyl hydrolase family 46 LT978_04145 PF10903 Protein of unknown function (DUF2691) LT978_04150 PF01266 FAD dependent oxidoreductase LT978_04155 PF01541 GIY-YIG catalytic domain LT978_04160 PF07853 Protein of unknown function (DUF1648) LT978_04165 PF13411 MerR HTH family regulatory protein LT978_04170 PF01380 SIS domain LT978_04175 PF01547 Bacterial extracellular solute-binding protein LT978_04180 PF00528 Binding-protein-dependent transport system inner membrane component LT978_04185 PF00528 Binding-protein-dependent transport system inner membrane component LT978_04190 PF00294 pfkB family carbohydrate kinase LT978_04195 PF00392 Bacterial regulatory proteins, gntR family LT978_04195 PF07702 UTRA domain LT978_04200 PF03459 TOBE domain LT978_04200 PF00005 ABC transporter LT978_04200 PF17912 MalK OB fold domain LT978_04205 PF04231 Endonuclease I LT978_04210 PF01546 Peptidase family M20/M25/M40 LT978_04215 PF00266 Aminotransferase class-V LT978_04220 PF07690 Major Facilitator Superfamily LT978_04230 PF07905 Purine catabolism regulatory protein-like family LT978_04230 PF17853 GGDEF-like domain LT978_04230 PF13556 PucR C-terminal helix-turn-helix domain LT978_04235 PF01979 Amidohydrolase family LT978_04245 PF01904 Protein of unknown function DUF72 LT978_04250 PF01925 Sulfite exporter TauE/SafE LT978_04255 PF02872 5'-nucleotidase, C-terminal domain LT978_04260 PF09560 Sporulation protein YunB (Spo_YunB) LT978_04265 PF01551 Peptidase family M23 LT978_04270 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LT978_04270 PF04055 Radical SAM superfamily LT978_04275 PF06265 Protein of unknown function (DUF1027) LT978_04280 PF01934 Protein of unknown function DUF86 LT978_04285 PF13344 Haloacid dehalogenase-like hydrolase LT978_04290 PF04608 Phosphatidylglycerophosphatase A LT978_04300 PF00742 Homoserine dehydrogenase LT978_04300 PF01842 ACT domain LT978_04300 PF03447 Homoserine dehydrogenase, NAD binding domain LT978_04305 PF00291 Pyridoxal-phosphate dependent enzyme LT978_04310 PF00288 GHMP kinases N terminal domain LT978_04310 PF08544 GHMP kinases C terminal LT978_04315 PF07676 WD40-like Beta Propeller Repeat LT978_04315 PF00326 Prolyl oligopeptidase family LT978_04320 PF01106 NifU-like domain LT978_04325 PF07315 Protein of unknown function (DUF1462) LT978_04330 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT978_04335 PF07293 Protein of unknown function (DUF1450) LT978_04340 PF07662 Na+ dependent nucleoside transporter C-terminus LT978_04340 PF01773 Na+ dependent nucleoside transporter N-terminus LT978_04345 PF01678 Diaminopimelate epimerase LT978_04350 PF01521 Iron-sulphur cluster biosynthesis LT978_04355 PF00106 short chain dehydrogenase LT978_04370 PF09221 Bacteriocin class IId cyclical uberolysin-like LT978_04380 PF00005 ABC transporter LT978_04395 PF00478 IMP dehydrogenase / GMP reductase domain LT978_04405 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT978_04410 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT978_04415 PF17302 Family of unknown function (DUF5351) LT978_04420 PF14068 Putative membrane protein LT978_04425 PF06725 3D domain LT978_04430 PF02681 Divergent PAP2 family LT978_04435 PF00883 Cytosol aminopeptidase family, catalytic domain LT978_04435 PF02789 Cytosol aminopeptidase family, N-terminal domain LT978_04440 PF03553 Na+/H+ antiporter family LT978_04440 PF13726 Na+-H+ antiporter family LT978_04445 PF02632 BioY family LT978_04450 PF00174 Oxidoreductase molybdopterin binding domain LT978_04455 PF00756 Putative esterase LT978_04460 PF00106 short chain dehydrogenase LT978_04465 PF00425 chorismate binding enzyme LT978_04470 PF13193 AMP-binding enzyme C-terminal domain LT978_04470 PF00501 AMP-binding enzyme LT978_04475 PF00857 Isochorismatase family LT978_04475 PF00550 Phosphopantetheine attachment site LT978_04480 PF00501 AMP-binding enzyme LT978_04480 PF13193 AMP-binding enzyme C-terminal domain LT978_04480 PF00668 Condensation domain LT978_04480 PF00550 Phosphopantetheine attachment site LT978_04480 PF00975 Thioesterase domain LT978_04485 PF03621 MbtH-like protein LT978_04495 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LT978_04495 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LT978_04500 PF13556 PucR C-terminal helix-turn-helix domain LT978_04500 PF17853 GGDEF-like domain LT978_04500 PF06018 CodY GAF-like domain LT978_04505 PF06013 Proteins of 100 residues with WXG LT978_04510 PF08817 WXG100 protein secretion system (Wss), protein YukD LT978_04515 PF10140 WXG100 protein secretion system (Wss), protein YukC LT978_04520 PF12538 DNA transporter LT978_04520 PF01580 FtsK/SpoIIIE family LT978_04530 PF17355 Family of unknown function (DUF5383) LT978_04535 PF00106 short chain dehydrogenase LT978_04540 PF01966 HD domain LT978_04545 PF10842 Protein of unknown function (DUF2642) LT978_04550 PF01594 AI-2E family transporter LT978_04555 PF10676 Spore germination protein gerPA/gerPF LT978_04560 PF14166 YueH-like protein LT978_04565 PF07997 Protein of unknown function (DUF1694) LT978_04570 PF00857 Isochorismatase family LT978_04575 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LT978_04575 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LT978_04575 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LT978_04580 PF00563 EAL domain LT978_04580 PF08668 HDOD domain LT978_04590 PF08181 DegQ (SacQ) family LT978_04595 PF00348 Polyprenyl synthetase LT978_04605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_04605 PF07730 Histidine kinase LT978_04610 PF00196 Bacterial regulatory proteins, luxR family LT978_04610 PF00072 Response regulator receiver domain LT978_04615 PF03061 Thioesterase superfamily LT978_04620 PF03334 Na+/H+ antiporter subunit LT978_04625 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LT978_04630 PF01899 Na+/H+ ion antiporter subunit LT978_04635 PF00361 Proton-conducting membrane transporter LT978_04640 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LT978_04645 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LT978_04650 PF13244 Domain of unknown function (DUF4040) LT978_04650 PF00361 Proton-conducting membrane transporter LT978_04650 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LT978_04660 PF02653 Branched-chain amino acid transport system / permease component LT978_04665 PF02653 Branched-chain amino acid transport system / permease component LT978_04670 PF00005 ABC transporter LT978_04675 PF02608 ABC transporter substrate-binding protein PnrA-like LT978_04680 PF00072 Response regulator receiver domain LT978_04685 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LT978_04685 PF17203 Single cache domain 3 LT978_04685 PF00989 PAS fold LT978_04685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_04690 PF17328 Family of unknown function (DUF5366) LT978_04695 PF04134 Protein of unknown function, DUF393 LT978_04700 PF00905 Penicillin binding protein transpeptidase domain LT978_04700 PF00912 Transglycosylase LT978_04705 PF07690 Major Facilitator Superfamily LT978_04710 PF00929 Exonuclease LT978_04715 PF08810 Kinase associated protein B LT978_04720 PF00512 His Kinase A (phospho-acceptor) domain LT978_04720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_04725 PF00155 Aminotransferase class I and II LT978_04730 PF08958 Domain of unknown function (DUF1871) LT978_04735 PF08386 TAP-like protein LT978_04735 PF00561 alpha/beta hydrolase fold LT978_04740 PF01037 Lrp/AsnC ligand binding domain LT978_04745 PF00155 Aminotransferase class I and II LT978_04750 PF00575 S1 RNA binding domain LT978_04755 PF04070 Domain of unknown function (DUF378) LT978_04760 PF00465 Iron-containing alcohol dehydrogenase LT978_04765 PF00465 Iron-containing alcohol dehydrogenase LT978_04770 PF00857 Isochorismatase family LT978_04775 PF03358 NADPH-dependent FMN reductase LT978_04780 PF00342 Phosphoglucose isomerase LT978_04790 PF08868 YugN-like family LT978_04795 PF07885 Ion channel LT978_04795 PF02254 TrkA-N domain LT978_04800 PF11458 Membrane-integrating protein Mistic LT978_04810 PF04298 Putative neutral zinc metallopeptidase LT978_04815 PF03471 Transporter associated domain LT978_04815 PF01595 Cyclin M transmembrane N-terminal domain LT978_04815 PF00571 CBS domain LT978_04820 PF16657 Maltogenic Amylase, C-terminal domain LT978_04820 PF00128 Alpha amylase, catalytic domain LT978_04825 PF01894 Uncharacterised protein family UPF0047 LT978_04830 PF03060 Nitronate monooxygenase LT978_04845 PF00672 HAMP domain LT978_04845 PF02743 Cache domain LT978_04845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LT978_04850 PF00672 HAMP domain LT978_04850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LT978_04850 PF02743 Cache domain LT978_04855 PF02743 Cache domain LT978_04855 PF00672 HAMP domain LT978_04855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LT978_04860 PF00672 HAMP domain LT978_04860 PF02743 Cache domain LT978_04860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LT978_04865 PF01965 DJ-1/PfpI family LT978_04870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LT978_04870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LT978_04875 PF01594 AI-2E family transporter LT978_04880 PF02673 Bacitracin resistance protein BacA LT978_04900 PF18801 response regulator aspartate phosphatase H, N terminal LT978_04900 PF13176 Tetratricopeptide repeat LT978_04920 PF00970 Oxidoreductase FAD-binding domain LT978_04920 PF00042 Globin LT978_04920 PF00175 Oxidoreductase NAD-binding domain LT978_04925 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LT978_04925 PF13457 GW (Gly-Tryp) dipeptide domain LT978_04930 PF02080 TrkA-C domain LT978_04930 PF02254 TrkA-N domain LT978_04935 PF17735 Biofilm surface layer A LT978_04945 PF00171 Aldehyde dehydrogenase family LT978_04950 PF00465 Iron-containing alcohol dehydrogenase LT978_04960 PF12867 DinB superfamily LT978_04970 PF15975 Flotillin LT978_04970 PF01145 SPFH domain / Band 7 family LT978_04975 PF09515 Thiamine transporter protein (Thia_YuaJ) LT978_05100 PF03073 TspO/MBR family LT978_05105 PF01258 Prokaryotic dksA/traR C4-type zinc finger LT978_05110 PF00425 chorismate binding enzyme LT978_05115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LT978_05115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LT978_05115 PF16582 Middle domain of thiamine pyrophosphate LT978_05120 PF00561 alpha/beta hydrolase fold LT978_05125 PF00378 Enoyl-CoA hydratase/isomerase LT978_05130 PF00501 AMP-binding enzyme LT978_05130 PF13193 AMP-binding enzyme C-terminal domain LT978_05135 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LT978_05135 PF13378 Enolase C-terminal domain-like LT978_05140 PF07561 Domain of Unknown Function (DUF1540) LT978_05145 PF02322 Cytochrome bd terminal oxidase subunit II LT978_05150 PF01654 Cytochrome bd terminal oxidase subunit I LT978_05155 PF01197 Ribosomal protein L31 LT978_05160 PF00484 Carbonic anhydrase LT978_05165 PF01809 Putative membrane protein insertion efficiency factor LT978_05170 PF02664 S-Ribosylhomocysteinase (LuxS) LT978_05175 PF13115 YtkA-like LT978_05185 PF00210 Ferritin-like domain LT978_05190 PF05105 Bacteriophage holin family LT978_05195 PF00293 NUDIX domain LT978_05200 PF00528 Binding-protein-dependent transport system inner membrane component LT978_05205 PF00005 ABC transporter LT978_05215 PF00326 Prolyl oligopeptidase family LT978_05220 PF10763 Protein of unknown function (DUF2584) LT978_05225 PF01293 Phosphoenolpyruvate carboxykinase LT978_05230 PF02773 S-adenosylmethionine synthetase, C-terminal domain LT978_05230 PF02772 S-adenosylmethionine synthetase, central domain LT978_05230 PF00438 S-adenosylmethionine synthetase, N-terminal domain LT978_05235 PF00733 Asparagine synthase LT978_05235 PF13537 Glutamine amidotransferase domain LT978_05240 PF00324 Amino acid permease LT978_05245 PF00132 Bacterial transferase hexapeptide (six repeats) LT978_05250 PF12146 Serine aminopeptidase, S33 LT978_05255 PF10776 Protein of unknown function (DUF2600) LT978_05260 PF03009 Glycerophosphoryl diester phosphodiesterase family LT978_05270 PF06962 Putative rRNA methylase LT978_05275 PF04055 Radical SAM superfamily LT978_05275 PF16199 Radical_SAM C-terminal domain LT978_05280 PF10732 Protein of unknown function (DUF2524) LT978_05290 PF00392 Bacterial regulatory proteins, gntR family LT978_05295 PF00005 ABC transporter LT978_05315 PF00005 ABC transporter LT978_05320 PF02687 FtsX-like permease family LT978_05320 PF12704 MacB-like periplasmic core domain LT978_05325 PF00072 Response regulator receiver domain LT978_05325 PF00486 Transcriptional regulatory protein, C terminal LT978_05330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_05335 PF00005 ABC transporter LT978_05340 PF02687 FtsX-like permease family LT978_05345 PF09529 Integral membrane protein (intg_mem_TP0381) LT978_05350 PF07690 Major Facilitator Superfamily LT978_05355 PF13426 PAS domain LT978_05355 PF01740 STAS domain LT978_05360 PF14074 Protein of unknown function (DUF4257) LT978_05365 PF08264 Anticodon-binding domain of tRNA LT978_05365 PF00133 tRNA synthetases class I (I, L, M and V) LT978_05365 PF13603 Leucyl-tRNA synthetase, Domain 2 LT978_05365 PF09334 tRNA synthetases class I (M) LT978_05370 PF00581 Rhodanese-like domain LT978_05380 PF11975 Family 4 glycosyl hydrolase C-terminal domain LT978_05380 PF02056 Family 4 glycosyl hydrolase LT978_05385 PF00528 Binding-protein-dependent transport system inner membrane component LT978_05390 PF00528 Binding-protein-dependent transport system inner membrane component LT978_05395 PF01547 Bacterial extracellular solute-binding protein LT978_05400 PF00356 Bacterial regulatory proteins, lacI family LT978_05405 PF10957 Sporulation protein Cse60 LT978_05410 PF02028 BCCT, betaine/carnitine/choline family transporter LT978_05420 PF01943 Polysaccharide biosynthesis protein LT978_05420 PF14667 Polysaccharide biosynthesis C-terminal domain LT978_05425 PF01479 S4 domain LT978_05425 PF00849 RNA pseudouridylate synthase LT978_05430 PF08220 DeoR-like helix-turn-helix domain LT978_05435 PF00005 ABC transporter LT978_05440 PF05975 Bacterial ABC transporter protein EcsB LT978_05445 PF00860 Permease family LT978_05450 PF01546 Peptidase family M20/M25/M40 LT978_05455 PF00291 Pyridoxal-phosphate dependent enzyme LT978_05470 PF00781 Diacylglycerol kinase catalytic domain LT978_05475 PF01636 Phosphotransferase enzyme family LT978_05480 PF14165 YtzH-like protein LT978_05485 PF02390 Putative methyltransferase LT978_05490 PF00753 Metallo-beta-lactamase superfamily LT978_05495 PF03949 Malic enzyme, NAD binding domain LT978_05495 PF00390 Malic enzyme, N-terminal domain LT978_05500 PF03413 Peptidase propeptide and YPEB domain LT978_05505 PF05343 M42 glutamyl aminopeptidase LT978_05510 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ LT978_05515 PF00085 Thioredoxin LT978_05520 PF07285 Protein of unknown function (DUF1444) LT978_05525 PF14794 Domain of unknown function (DUF4479) LT978_05525 PF01588 Putative tRNA binding domain LT978_05530 PF17854 FtsK alpha domain LT978_05530 PF09397 Ftsk gamma domain LT978_05530 PF01580 FtsK/SpoIIIE family LT978_05535 PF08245 Mur ligase middle domain LT978_05535 PF02875 Mur ligase family, glutamate ligase domain LT978_05535 PF01225 Mur ligase family, catalytic domain LT978_05540 PF06103 Bacterial protein of unknown function (DUF948) LT978_05545 PF12732 YtxH-like protein LT978_05550 PF11009 Protein of unknown function (DUF2847) LT978_05555 PF01817 Chorismate mutase type II LT978_05555 PF00793 DAHP synthetase I family LT978_05560 PF00356 Bacterial regulatory proteins, lacI family LT978_05565 PF01618 MotA/TolQ/ExbB proton channel family LT978_05570 PF13677 Membrane MotB of proton-channel complex MotA/MotB LT978_05570 PF00691 OmpA family LT978_05575 PF00850 Histone deacetylase domain LT978_05580 PF00571 CBS domain LT978_05585 PF00583 Acetyltransferase (GNAT) family LT978_05590 PF00501 AMP-binding enzyme LT978_05590 PF13193 AMP-binding enzyme C-terminal domain LT978_05595 PF00579 tRNA synthetases class I (W and Y) LT978_05595 PF01479 S4 domain LT978_05610 PF01978 Sugar-specific transcriptional regulator TrmB LT978_05610 PF11495 Archaeal transcriptional regulator TrmB LT978_05615 PF01545 Cation efflux family LT978_05615 PF16916 Dimerisation domain of Zinc Transporter LT978_05630 PF01965 DJ-1/PfpI family LT978_05640 PF00970 Oxidoreductase FAD-binding domain LT978_05640 PF00175 Oxidoreductase NAD-binding domain LT978_05640 PF00042 Globin LT978_05675 PF00171 Aldehyde dehydrogenase family LT978_05680 PF01479 S4 domain LT978_05680 PF00163 Ribosomal protein S4/S9 N-terminal domain LT978_05685 PF00990 Diguanylate cyclase, GGDEF domain LT978_05690 PF13185 GAF domain LT978_05695 PF00440 Bacterial regulatory proteins, tetR family LT978_05700 PF02811 PHP domain LT978_05705 PF06160 Septation ring formation regulator, EzrA LT978_05710 PF05525 Branched-chain amino acid transport protein LT978_05715 PF00266 Aminotransferase class-V LT978_05720 PF02568 Thiamine biosynthesis protein (ThiI) LT978_05720 PF02926 THUMP domain LT978_05725 PF00269 Small, acid-soluble spore proteins, alpha/beta type LT978_05730 PF00501 AMP-binding enzyme LT978_05730 PF13193 AMP-binding enzyme C-terminal domain LT978_05735 PF07969 Amidohydrolase family LT978_05740 PF01513 ATP-NAD kinase LT978_05745 PF01343 Peptidase family S49 LT978_05750 PF06271 RDD family LT978_05755 PF11167 Protein of unknown function (DUF2953) LT978_05760 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LT978_05765 PF08534 Redoxin LT978_05770 PF02384 N-6 DNA Methylase LT978_05775 PF00871 Acetokinase family LT978_05780 PF00994 Probable molybdopterin binding domain LT978_05785 PF00764 Arginosuccinate synthase LT978_05790 PF14698 Argininosuccinate lyase C-terminal LT978_05790 PF00206 Lyase LT978_05805 PF00571 CBS domain LT978_05805 PF07085 DRTGG domain LT978_05805 PF00392 Bacterial regulatory proteins, gntR family LT978_05805 PF03061 Thioesterase superfamily LT978_05810 PF14007 YtpI-like protein LT978_05815 PF02272 DHHA1 domain LT978_05815 PF01368 DHH family LT978_05830 PF14034 Sporulation protein YtrH LT978_05835 PF14579 Helix-hairpin-helix motif LT978_05835 PF02811 PHP domain LT978_05835 PF07733 Bacterial DNA polymerase III alpha NTPase domain LT978_05835 PF01336 OB-fold nucleic acid binding domain LT978_05835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LT978_05840 PF00390 Malic enzyme, N-terminal domain LT978_05840 PF03949 Malic enzyme, NAD binding domain LT978_05845 PF01039 Carboxyl transferase domain LT978_05845 PF17848 Acetyl-coA carboxylase zinc finger domain LT978_05850 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LT978_05855 PF00365 Phosphofructokinase LT978_05860 PF00391 PEP-utilising enzyme, mobile domain LT978_05860 PF00224 Pyruvate kinase, barrel domain LT978_05860 PF02887 Pyruvate kinase, alpha/beta domain LT978_05865 PF04186 FxsA cytoplasmic membrane protein LT978_05870 PF01594 AI-2E family transporter LT978_05875 PF04284 Protein of unknown function (DUF441) LT978_05885 PF11208 Protein of unknown function (DUF2992) LT978_05895 PF00285 Citrate synthase, C-terminal domain LT978_05900 PF00180 Isocitrate/isopropylmalate dehydrogenase LT978_05905 PF00056 lactate/malate dehydrogenase, NAD binding domain LT978_05905 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LT978_05910 PF00486 Transcriptional regulatory protein, C terminal LT978_05910 PF00072 Response regulator receiver domain LT978_05915 PF00512 His Kinase A (phospho-acceptor) domain LT978_05915 PF00989 PAS fold LT978_05915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_05915 PF16736 Single Cache-like LT978_05920 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LT978_05920 PF00476 DNA polymerase family A LT978_05920 PF01367 5'-3' exonuclease, C-terminal SAM fold LT978_05925 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LT978_05925 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LT978_05925 PF06827 Zinc finger found in FPG and IleRS LT978_05930 PF02659 Putative manganese efflux pump LT978_05935 PF01121 Dephospho-CoA kinase LT978_05940 PF00248 Aldo/keto reductase family LT978_05945 PF07690 Major Facilitator Superfamily LT978_05950 PF01638 HxlR-like helix-turn-helix LT978_05955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LT978_05955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LT978_05960 PF02675 S-adenosylmethionine decarboxylase LT978_05965 PF03477 ATP cone domain LT978_05970 PF07261 Replication initiation and membrane attachment LT978_05975 PF07319 Primosomal protein DnaI N-terminus LT978_05975 PF01695 IstB-like ATP binding protein LT978_05980 PF09335 SNARE associated Golgi protein LT978_05985 PF08812 YtxC-like family LT978_05990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LT978_05990 PF03129 Anticodon binding domain LT978_05990 PF02824 TGS domain LT978_05990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LT978_05995 PF13419 Haloacid dehalogenase-like hydrolase LT978_06000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_06000 PF06580 Histidine kinase LT978_06000 PF07694 5TMR of 5TMR-LYT LT978_06005 PF04397 LytTr DNA-binding domain LT978_06005 PF00072 Response regulator receiver domain LT978_06010 PF03788 LrgA family LT978_06015 PF04172 LrgB-like family LT978_06020 PF00707 Translation initiation factor IF-3, C-terminal domain LT978_06020 PF05198 Translation initiation factor IF-3, N-terminal domain LT978_06025 PF01632 Ribosomal protein L35 LT978_06030 PF00453 Ribosomal protein L20 LT978_06035 PF06961 Protein of unknown function (DUF1294) LT978_06045 PF05343 M42 glutamyl aminopeptidase LT978_06050 PF04616 Glycosyl hydrolases family 43 LT978_06055 PF11762 L-arabinose isomerase C-terminal domain LT978_06055 PF02610 L-arabinose isomerase LT978_06060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LT978_06060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LT978_06065 PF00596 Class II Aldolase and Adducin N-terminal domain LT978_06070 PF13344 Haloacid dehalogenase-like hydrolase LT978_06075 PF13685 Iron-containing alcohol dehydrogenase LT978_06080 PF01547 Bacterial extracellular solute-binding protein LT978_06085 PF00528 Binding-protein-dependent transport system inner membrane component LT978_06090 PF00528 Binding-protein-dependent transport system inner membrane component LT978_06095 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LT978_06100 PF02554 Carbon starvation protein CstA LT978_06100 PF13722 5TM C-terminal transporter carbon starvation CstA LT978_06105 PF02754 Cysteine-rich domain LT978_06105 PF13183 4Fe-4S dicluster domain LT978_06110 PF02913 FAD linked oxidases, C-terminal domain LT978_06110 PF01565 FAD binding domain LT978_06115 PF05651 Putative sugar diacid recognition LT978_06115 PF17853 GGDEF-like domain LT978_06115 PF13556 PucR C-terminal helix-turn-helix domain LT978_06120 PF14098 Small, acid-soluble spore protein I LT978_06125 PF00588 SpoU rRNA Methylase family LT978_06125 PF08032 RNA 2'-O ribose methyltransferase substrate binding LT978_06130 PF01409 tRNA synthetases class II core domain (F) LT978_06130 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LT978_06135 PF03483 B3/4 domain LT978_06135 PF03484 tRNA synthetase B5 domain LT978_06135 PF03147 Ferredoxin-fold anticodon binding domain LT978_06135 PF01588 Putative tRNA binding domain LT978_06135 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LT978_06140 PF11858 Domain of unknown function (DUF3378) LT978_06140 PF01351 Ribonuclease HII LT978_06145 PF05164 Cell division protein ZapA LT978_06150 PF02674 Colicin V production protein LT978_06155 PF14791 DNA polymerase beta thumb LT978_06155 PF14716 Helix-hairpin-helix domain LT978_06155 PF02811 PHP domain LT978_06160 PF01713 Smr domain LT978_06160 PF00488 MutS domain V LT978_06165 PF03994 Domain of Unknown Function (DUF350) LT978_06170 PF10924 Protein of unknown function (DUF2711) LT978_06175 PF00501 AMP-binding enzyme LT978_06175 PF13193 AMP-binding enzyme C-terminal domain LT978_06180 PF08359 YsiA-like protein, C-terminal region LT978_06180 PF00440 Bacterial regulatory proteins, tetR family LT978_06185 PF00378 Enoyl-CoA hydratase/isomerase LT978_06190 PF01012 Electron transfer flavoprotein domain LT978_06195 PF01012 Electron transfer flavoprotein domain LT978_06195 PF00766 Electron transfer flavoprotein FAD-binding domain LT978_06200 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LT978_06205 PF00085 Thioredoxin LT978_06210 PF08459 UvrC Helix-hairpin-helix N-terminal LT978_06210 PF01541 GIY-YIG catalytic domain LT978_06210 PF02151 UvrB/uvrC motif LT978_06215 PF00696 Amino acid kinase family LT978_06215 PF01842 ACT domain LT978_06215 PF13840 ACT domain LT978_06220 PF10702 Protein of unknown function (DUF2507) LT978_06225 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LT978_06230 PF00890 FAD binding domain LT978_06230 PF02910 Fumarate reductase flavoprotein C-term LT978_06235 PF13085 2Fe-2S iron-sulfur cluster binding domain LT978_06235 PF13183 4Fe-4S dicluster domain LT978_06240 PF03061 Thioesterase superfamily LT978_06245 PF00196 Bacterial regulatory proteins, luxR family LT978_06250 PF01047 MarR family LT978_06255 PF01177 Asp/Glu/Hydantoin racemase LT978_06260 PF10646 Sporulation and spore germination LT978_06265 PF01138 3' exoribonuclease family, domain 1 LT978_06265 PF03725 3' exoribonuclease family, domain 2 LT978_06270 PF01725 Ham1 family LT978_06275 PF12850 Calcineurin-like phosphoesterase superfamily domain LT978_06300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LT978_06300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LT978_06300 PF00205 Thiamine pyrophosphate enzyme, central domain LT978_06305 PF01842 ACT domain LT978_06305 PF10369 Small subunit of acetolactate synthase LT978_06310 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LT978_06310 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LT978_06315 PF00682 HMGL-like LT978_06315 PF08502 LeuA allosteric (dimerisation) domain LT978_06320 PF00180 Isocitrate/isopropylmalate dehydrogenase LT978_06325 PF00330 Aconitase family (aconitate hydratase) LT978_06330 PF00694 Aconitase C-terminal domain LT978_06340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LT978_06340 PF05698 Bacterial trigger factor protein (TF) C-terminus LT978_06340 PF05697 Bacterial trigger factor protein (TF) LT978_06345 PF06689 ClpX C4-type zinc finger LT978_06345 PF10431 C-terminal, D2-small domain, of ClpB protein LT978_06345 PF07724 AAA domain (Cdc48 subfamily) LT978_06350 PF00004 ATPase family associated with various cellular activities (AAA) LT978_06350 PF05362 Lon protease (S16) C-terminal proteolytic domain LT978_06355 PF00004 ATPase family associated with various cellular activities (AAA) LT978_06355 PF05362 Lon protease (S16) C-terminal proteolytic domain LT978_06355 PF02190 ATP-dependent protease La (LON) substrate-binding domain LT978_06360 PF01926 50S ribosome-binding GTPase LT978_06370 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LT978_06370 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LT978_06370 PF01488 Shikimate / quinate 5-dehydrogenase LT978_06375 PF01578 Cytochrome C assembly protein LT978_06380 PF03900 Porphobilinogen deaminase, C-terminal domain LT978_06380 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LT978_06385 PF02602 Uroporphyrinogen-III synthase HemD LT978_06390 PF00490 Delta-aminolevulinic acid dehydratase LT978_06395 PF00202 Aminotransferase class-III LT978_06400 PF01476 LysM domain LT978_06415 PF08264 Anticodon-binding domain of tRNA LT978_06415 PF00133 tRNA synthetases class I (I, L, M and V) LT978_06415 PF10458 Valyl tRNA synthetase tRNA binding arm LT978_06420 PF02875 Mur ligase family, glutamate ligase domain LT978_06420 PF08245 Mur ligase middle domain LT978_06425 PF01478 Type IV leader peptidase family LT978_06425 PF06750 Bacterial Peptidase A24 N-terminal domain LT978_06430 PF05036 Sporulation related domain LT978_06435 PF02545 Maf-like protein LT978_06440 PF04002 RadC-like JAB domain LT978_06450 PF04085 rod shape-determining protein MreC LT978_06455 PF04093 rod shape-determining protein MreD LT978_06460 PF03775 Septum formation inhibitor MinC, C-terminal domain LT978_06465 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LT978_06470 PF01551 Peptidase family M23 LT978_06475 PF02163 Peptidase family M50 LT978_06480 PF00829 Ribosomal prokaryotic L21 protein LT978_06485 PF04327 Cysteine protease Prp LT978_06490 PF01016 Ribosomal L27 protein LT978_06495 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LT978_06495 PF14682 Sporulation initiation phospho-transferase B, C-terminal LT978_06500 PF01018 GTP1/OBG LT978_06500 PF01926 50S ribosome-binding GTPase LT978_06500 PF09269 Domain of unknown function (DUF1967) LT978_06505 PF01842 ACT domain LT978_06510 PF01842 ACT domain LT978_06510 PF00800 Prephenate dehydratase LT978_06515 PF02829 3H domain LT978_06515 PF08279 HTH domain LT978_06520 PF00266 Aminotransferase class-V LT978_06525 PF00890 FAD binding domain LT978_06525 PF02910 Fumarate reductase flavoprotein C-term LT978_06530 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LT978_06530 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LT978_06535 PF02445 Quinolinate synthetase A protein LT978_06540 PF01476 LysM domain LT978_06545 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LT978_06550 PF08955 BofC C-terminal domain LT978_06550 PF08977 Bypass of Forespore C, N terminal LT978_06555 PF07499 RuvA, C-terminal domain LT978_06555 PF01330 RuvA N terminal domain LT978_06560 PF17864 RuvB AAA lid domain LT978_06560 PF05491 RuvB C-terminal winged helix domain LT978_06560 PF05496 Holliday junction DNA helicase RuvB P-loop domain LT978_06565 PF11146 Protein of unknown function (DUF2905) LT978_06570 PF02547 Queuosine biosynthesis protein LT978_06575 PF01702 Queuine tRNA-ribosyltransferase LT978_06580 PF02699 Preprotein translocase subunit LT978_06585 PF12670 Protein of unknown function (DUF3792) LT978_06590 PF04239 Protein of unknown function (DUF421) LT978_06595 PF01943 Polysaccharide biosynthesis protein LT978_06595 PF14667 Polysaccharide biosynthesis C-terminal domain LT978_06600 PF13797 Post-transcriptional regulator LT978_06605 PF07549 SecD/SecF GG Motif LT978_06605 PF02355 Protein export membrane protein LT978_06610 PF02080 TrkA-C domain LT978_06615 PF06305 Lipopolysaccharide assembly protein A domain LT978_06620 PF01368 DHH family LT978_06620 PF02272 DHHA1 domain LT978_06620 PF17768 RecJ OB domain LT978_06620 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LT978_06625 PF00156 Phosphoribosyl transferase domain LT978_06630 PF02824 TGS domain LT978_06630 PF13291 ACT domain LT978_06630 PF04607 Region found in RelA / SpoT proteins LT978_06635 PF02580 D-Tyr-tRNA(Tyr) deacylase LT978_06640 PF01520 N-acetylmuramoyl-L-alanine amidase LT978_06640 PF08239 Bacterial SH3 domain LT978_06645 PF17449 Uncharacterized YrzK-like LT978_06650 PF03129 Anticodon binding domain LT978_06650 PF13393 Histidyl-tRNA synthetase LT978_06655 PF02938 GAD domain LT978_06655 PF00152 tRNA synthetases class II (D, K and N) LT978_06655 PF01336 OB-fold nucleic acid binding domain LT978_06665 PF00899 ThiF family LT978_06670 PF12002 MgsA AAA+ ATPase C terminal LT978_06670 PF05496 Holliday junction DNA helicase RuvB P-loop domain LT978_06670 PF16193 AAA C-terminal domain LT978_06675 PF02082 Transcriptional regulator LT978_06680 PF00266 Aminotransferase class-V LT978_06690 PF07719 Tetratricopeptide repeat LT978_06690 PF13181 Tetratricopeptide repeat LT978_06695 PF14490 Helix-hairpin-helix containing domain LT978_06695 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LT978_06695 PF13538 UvrD-like helicase C-terminal domain LT978_06700 PF05239 PRC-barrel domain LT978_06710 PF13056 Protein of unknown function (DUF3918) LT978_06715 PF00528 Binding-protein-dependent transport system inner membrane component LT978_06720 PF00528 Binding-protein-dependent transport system inner membrane component LT978_06725 PF00497 Bacterial extracellular solute-binding proteins, family 3 LT978_06730 PF00005 ABC transporter LT978_06735 PF01594 AI-2E family transporter LT978_06740 PF01411 tRNA synthetases class II (A) LT978_06740 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LT978_06740 PF02272 DHHA1 domain LT978_06745 PF06135 IreB regulatory phosphoprotein LT978_06750 PF03652 Holliday junction resolvase LT978_06755 PF06949 Protein of unknown function (DUF1292) LT978_06760 PF02618 YceG-like family LT978_06765 PF01596 O-methyltransferase LT978_06770 PF01136 Peptidase family U32 LT978_06775 PF16325 Peptidase family U32 C-terminal domain LT978_06775 PF01136 Peptidase family U32 LT978_06780 PF00485 Phosphoribulokinase / Uridine kinase family LT978_06785 PF01272 Transcription elongation factor, GreA/GreB, C-term LT978_06785 PF03449 Transcription elongation factor, N-terminal LT978_06790 PF03717 Penicillin-binding Protein dimerisation domain LT978_06790 PF00905 Penicillin binding protein transpeptidase domain LT978_06795 PF07423 Domain of unknown function (DUF1510) LT978_06800 PF10750 Protein of unknown function (DUF2536) LT978_06805 PF13649 Methyltransferase domain LT978_06810 PF01048 Phosphorylase superfamily LT978_06815 PF00291 Pyridoxal-phosphate dependent enzyme LT978_06820 PF01053 Cys/Met metabolism PLP-dependent enzyme LT978_06825 PF14143 YrhC-like protein LT978_06830 PF07849 Protein of unknown function (DUF1641) LT978_06835 PF00037 4Fe-4S binding domain LT978_06835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LT978_06835 PF00384 Molybdopterin oxidoreductase LT978_06835 PF01568 Molydopterin dinucleotide binding domain LT978_06835 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LT978_06840 PF10057 Uncharacterized conserved protein (DUF2294) LT978_06845 PF01226 Formate/nitrite transporter LT978_06850 PF09501 Probable sporulation protein (Bac_small_yrzI) LT978_06860 PF08241 Methyltransferase domain LT978_06865 PF16295 Tetracyclin repressor-like, C-terminal domain LT978_06865 PF00440 Bacterial regulatory proteins, tetR family LT978_06870 PF00067 Cytochrome P450 LT978_06870 PF00175 Oxidoreductase NAD-binding domain LT978_06870 PF00258 Flavodoxin LT978_06870 PF00667 FAD binding domain LT978_06875 PF07690 Major Facilitator Superfamily LT978_06880 PF03466 LysR substrate binding domain LT978_06880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_06885 PF04073 Aminoacyl-tRNA editing domain LT978_06890 PF12706 Beta-lactamase superfamily domain LT978_06895 PF08279 HTH domain LT978_06895 PF05043 Mga helix-turn-helix domain LT978_06895 PF00874 PRD domain LT978_06895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LT978_06900 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LT978_06900 PF02378 Phosphotransferase system, EIIC LT978_06900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LT978_06905 PF01238 Phosphomannose isomerase type I LT978_06910 PF01380 SIS domain LT978_06910 PF01418 Helix-turn-helix domain, rpiR family LT978_06930 PF05163 DinB family LT978_06935 PF00583 Acetyltransferase (GNAT) family LT978_06975 PF04740 LXG domain of WXG superfamily LT978_06990 PF07690 Major Facilitator Superfamily LT978_07000 PF06445 GyrI-like small molecule binding domain LT978_07000 PF12833 Helix-turn-helix domain LT978_07015 PF04542 Sigma-70 region 2 LT978_07015 PF04545 Sigma-70, region 4 LT978_07025 PF09335 SNARE associated Golgi protein LT978_07030 PF01522 Polysaccharide deacetylase LT978_07035 PF00657 GDSL-like Lipase/Acylhydrolase LT978_07040 PF08970 Sporulation inhibitor A LT978_07050 PF01926 50S ribosome-binding GTPase LT978_07055 PF08501 Shikimate dehydrogenase substrate binding domain LT978_07055 PF01488 Shikimate / quinate 5-dehydrogenase LT978_07055 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LT978_07060 PF01985 CRS1 / YhbY (CRM) domain LT978_07065 PF01467 Cytidylyltransferase-like LT978_07070 PF01966 HD domain LT978_07080 PF13649 Methyltransferase domain LT978_07085 PF03807 NADP oxidoreductase coenzyme F420-dependent LT978_07085 PF14748 Pyrroline-5-carboxylate reductase dimerisation LT978_07090 PF10531 SLBB domain LT978_07095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LT978_07100 PF00753 Metallo-beta-lactamase superfamily LT978_07100 PF03772 Competence protein LT978_07100 PF13567 Domain of unknown function (DUF4131) LT978_07105 PF14141 YqzM-like protein LT978_07120 PF01649 Ribosomal protein S20 LT978_07125 PF03418 Germination protease LT978_07130 PF07454 Stage II sporulation protein P (SpoIIP) LT978_07135 PF12438 Protein of unknown function (DUF3679) LT978_07140 PF00679 Elongation factor G C-terminus LT978_07140 PF00009 Elongation factor Tu GTP binding domain LT978_07140 PF03144 Elongation factor Tu domain 2 LT978_07140 PF06421 GTP-binding protein LepA C-terminus LT978_07145 PF06969 HemN C-terminal domain LT978_07145 PF04055 Radical SAM superfamily LT978_07150 PF01628 HrcA protein C terminal domain LT978_07155 PF01025 GrpE LT978_07160 PF00012 Hsp70 protein LT978_07165 PF00226 DnaJ domain LT978_07165 PF01556 DnaJ C terminal domain LT978_07165 PF00684 DnaJ central domain LT978_07175 PF04452 RNA methyltransferase LT978_07180 PF04055 Radical SAM superfamily LT978_07180 PF01938 TRAM domain LT978_07180 PF00919 Uncharacterized protein family UPF0004 LT978_07185 PF02690 Na+/Pi-cotransporter LT978_07190 PF01165 Ribosomal protein S21 LT978_07195 PF09424 Yqey-like protein LT978_07200 PF01972 Serine dehydrogenase proteinase LT978_07200 PF01957 NfeD-like C-terminal, partner-binding LT978_07205 PF12127 SigmaW regulon antibacterial LT978_07215 PF07873 YabP family LT978_07220 PF06898 Putative stage IV sporulation protein YqfD LT978_07225 PF02562 PhoH-like protein LT978_07230 PF07698 7TM receptor with intracellular HD hydrolase LT978_07230 PF07697 7TM-HD extracellular LT978_07230 PF01966 HD domain LT978_07235 PF02130 Uncharacterized protein family UPF0054 LT978_07240 PF01219 Prokaryotic diacylglycerol kinase LT978_07245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LT978_07250 PF07650 KH domain LT978_07250 PF01926 50S ribosome-binding GTPase LT978_07255 PF14006 YqzL-like protein LT978_07260 PF02565 Recombination protein O C terminal LT978_07260 PF11967 Recombination protein O N terminal LT978_07265 PF02091 Glycyl-tRNA synthetase alpha subunit LT978_07270 PF02092 Glycyl-tRNA synthetase beta subunit LT978_07275 PF00571 CBS domain LT978_07275 PF08279 HTH domain LT978_07280 PF03618 Kinase/pyrophosphorylase LT978_07285 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LT978_07290 PF08275 DNA primase catalytic core, N-terminal domain LT978_07290 PF01807 CHC2 zinc finger LT978_07290 PF10410 DnaB-helicase binding domain of primase LT978_07295 PF03979 Sigma-70 factor, region 1.1 LT978_07295 PF00140 Sigma-70 factor, region 1.2 LT978_07295 PF04542 Sigma-70 region 2 LT978_07295 PF04539 Sigma-70 region 3 LT978_07295 PF04545 Sigma-70, region 4 LT978_07300 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LT978_07305 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LT978_07310 PF01784 NIF3 (NGG1p interacting factor 3) LT978_07315 PF02401 LytB protein LT978_07320 PF14181 YqfQ-like protein LT978_07325 PF00271 Helicase conserved C-terminal domain LT978_07325 PF00270 DEAD/DEAH box helicase LT978_07330 PF01261 Xylose isomerase-like TIM barrel LT978_07335 PF11116 Protein of unknown function (DUF2624) LT978_07340 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LT978_07340 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LT978_07345 PF01475 Ferric uptake regulator family LT978_07360 PF04551 GcpE protein LT978_07370 PF06691 Protein of unknown function (DUF1189) LT978_07375 PF04306 Protein of unknown function (DUF456) LT978_07380 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LT978_07380 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LT978_07385 PF07690 Major Facilitator Superfamily LT978_07390 PF03717 Penicillin-binding Protein dimerisation domain LT978_07390 PF00905 Penicillin binding protein transpeptidase domain LT978_07395 PF12849 PBP superfamily domain LT978_07400 PF00528 Binding-protein-dependent transport system inner membrane component LT978_07405 PF00528 Binding-protein-dependent transport system inner membrane component LT978_07410 PF00005 ABC transporter LT978_07415 PF00005 ABC transporter LT978_07430 PF00471 Ribosomal protein L33 LT978_07435 PF01812 5-formyltetrahydrofolate cyclo-ligase family LT978_07445 PF03553 Na+/H+ antiporter family LT978_07450 PF06014 Bacterial protein of unknown function (DUF910) LT978_07455 PF00480 ROK family LT978_07460 PF00246 Zinc carboxypeptidase LT978_07470 PF01910 Thiamine-binding protein LT978_07475 PF10958 Protein of unknown function (DUF2759) LT978_07480 PF00753 Metallo-beta-lactamase superfamily LT978_07485 PF11117 Protein of unknown function (DUF2626) LT978_07490 PF03960 ArsC family LT978_07500 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain LT978_07500 PF01740 STAS domain LT978_07505 PF01595 Cyclin M transmembrane N-terminal domain LT978_07505 PF00571 CBS domain LT978_07505 PF03471 Transporter associated domain LT978_07510 PF01544 CorA-like Mg2+ transporter protein LT978_07515 PF00437 Type II/IV secretion system protein LT978_07520 PF00482 Type II secretion system (T2SS), protein F LT978_07525 PF07963 Prokaryotic N-terminal methylation motif LT978_07530 PF07963 Prokaryotic N-terminal methylation motif LT978_07540 PF15980 Putative Competence protein ComGF LT978_07545 PF14173 ComG operon protein 7 LT978_07550 PF14038 YqzE-like protein LT978_07555 PF13028 Protein of unknown function (DUF3889) LT978_07570 PF12389 Camelysin metallo-endopeptidase LT978_07575 PF01381 Helix-turn-helix LT978_07575 PF08671 Anti-repressor SinI LT978_07580 PF08671 Anti-repressor SinI LT978_07585 PF11079 Bacterial protein YqhG of unknown function LT978_07590 PF00271 Helicase conserved C-terminal domain LT978_07590 PF00176 SNF2 family N-terminal domain LT978_07595 PF08669 Glycine cleavage T-protein C-terminal barrel domain LT978_07595 PF01571 Aminomethyltransferase folate-binding domain LT978_07600 PF02347 Glycine cleavage system P-protein LT978_07605 PF02347 Glycine cleavage system P-protein LT978_07610 PF00581 Rhodanese-like domain LT978_07615 PF03099 Biotin/lipoate A/B protein ligase family LT978_07620 PF01325 Iron dependent repressor, N-terminal DNA binding domain LT978_07620 PF02742 Iron dependent repressor, metal binding and dimerisation domain LT978_07625 PF01734 Patatin-like phospholipase LT978_07635 PF07136 Protein of unknown function (DUF1385) LT978_07640 PF11085 Conserved membrane protein YqhR LT978_07645 PF01321 Creatinase/Prolidase N-terminal domain LT978_07645 PF00557 Metallopeptidase family M24 LT978_07650 PF01132 Elongation factor P (EF-P) OB domain LT978_07650 PF08207 Elongation factor P (EF-P) KOW-like domain LT978_07650 PF09285 Elongation factor P, C-terminal LT978_07655 PF10942 Protein of unknown function (DUF2619) LT978_07665 PF09548 Stage III sporulation protein AB (spore_III_AB) LT978_07670 PF06686 Stage III sporulation protein AC/AD protein family LT978_07675 PF06686 Stage III sporulation protein AC/AD protein family LT978_07680 PF09546 Stage III sporulation protein AE (spore_III_AE) LT978_07685 PF09581 Stage III sporulation protein AF (Spore_III_AF) LT978_07695 PF12685 SpoIIIAH-like protein LT978_07700 PF00364 Biotin-requiring enzyme LT978_07705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LT978_07705 PF02785 Biotin carboxylase C-terminal domain LT978_07705 PF00289 Biotin carboxylase, N-terminal domain LT978_07710 PF03780 Asp23 family, cell envelope-related function LT978_07715 PF01029 NusB family LT978_07720 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LT978_07720 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LT978_07725 PF02601 Exonuclease VII, large subunit LT978_07725 PF13742 OB-fold nucleic acid binding domain LT978_07730 PF02609 Exonuclease VII small subunit LT978_07735 PF00348 Polyprenyl synthetase LT978_07740 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LT978_07740 PF02780 Transketolase, C-terminal domain LT978_07740 PF02779 Transketolase, pyrimidine binding domain LT978_07745 PF01479 S4 domain LT978_07745 PF01728 FtsJ-like methyltransferase LT978_07750 PF01316 Arginine repressor, DNA binding domain LT978_07750 PF02863 Arginine repressor, C-terminal domain LT978_07755 PF13476 AAA domain LT978_07760 PF17820 PDZ domain LT978_07760 PF05580 SpoIVB peptidase S55 LT978_07765 PF00072 Response regulator receiver domain LT978_07765 PF08769 Sporulation initiation factor Spo0A C terminal LT978_07770 PF00842 Alanine racemase, C-terminal domain LT978_07770 PF01168 Alanine racemase, N-terminal domain LT978_07775 PF10676 Spore germination protein gerPA/gerPF LT978_07780 PF10676 Spore germination protein gerPA/gerPF LT978_07785 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LT978_07810 PF01520 N-acetylmuramoyl-L-alanine amidase LT978_07815 PF03009 Glycerophosphoryl diester phosphodiesterase family LT978_07820 PF02803 Thiolase, C-terminal domain LT978_07820 PF00108 Thiolase, N-terminal domain LT978_07825 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LT978_07825 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LT978_07830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LT978_07830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LT978_07830 PF02770 Acyl-CoA dehydrogenase, middle domain LT978_07835 PF00285 Citrate synthase, C-terminal domain LT978_07840 PF03972 MmgE/PrpD family LT978_07850 PF11118 Protein of unknown function (DUF2627) LT978_07855 PF02954 Bacterial regulatory protein, Fis family LT978_07855 PF00158 Sigma-54 interaction domain LT978_07855 PF00989 PAS fold LT978_07860 PF01515 Phosphate acetyl/butaryl transferase LT978_07865 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LT978_07865 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LT978_07870 PF00871 Acetokinase family LT978_07875 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT978_07875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LT978_07880 PF00676 Dehydrogenase E1 component LT978_07885 PF02779 Transketolase, pyrimidine binding domain LT978_07885 PF02780 Transketolase, C-terminal domain LT978_07890 PF02817 e3 binding domain LT978_07890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LT978_07890 PF00364 Biotin-requiring enzyme LT978_07895 PF00781 Diacylglycerol kinase catalytic domain LT978_07900 PF06491 Disulphide isomerase LT978_07905 PF00497 Bacterial extracellular solute-binding proteins, family 3 LT978_07910 PF00528 Binding-protein-dependent transport system inner membrane component LT978_07915 PF00005 ABC transporter LT978_07920 PF06081 Aromatic acid exporter family member 1 LT978_07920 PF11728 Putative aromatic acid exporter C-terminal domain LT978_07925 PF03734 L,D-transpeptidase catalytic domain LT978_07940 PF01039 Carboxyl transferase domain LT978_07945 PF01546 Peptidase family M20/M25/M40 LT978_07945 PF07687 Peptidase dimerisation domain LT978_07950 PF02096 60Kd inner membrane protein LT978_07960 PF11799 impB/mucB/samB family C-terminal domain LT978_07960 PF11798 IMS family HHH motif LT978_07960 PF00817 impB/mucB/samB family LT978_07965 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LT978_07965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LT978_07970 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LT978_07970 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LT978_07975 PF12706 Beta-lactamase superfamily domain LT978_07980 PF00471 Ribosomal protein L33 LT978_07990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LT978_08000 PF03466 LysR substrate binding domain LT978_08000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_08005 PF02357 Transcription termination factor nusG LT978_08005 PF00467 KOW motif LT978_08010 PF00698 Acyl transferase domain LT978_08010 PF03060 Nitronate monooxygenase LT978_08025 PF13193 AMP-binding enzyme C-terminal domain LT978_08025 PF00501 AMP-binding enzyme LT978_08035 PF14765 Polyketide synthase dehydratase LT978_08035 PF16197 Ketoacyl-synthetase C-terminal extension LT978_08035 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_08035 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_08035 PF08659 KR domain LT978_08035 PF08242 Methyltransferase domain LT978_08035 PF00550 Phosphopantetheine attachment site LT978_08040 PF14765 Polyketide synthase dehydratase LT978_08040 PF00550 Phosphopantetheine attachment site LT978_08040 PF08659 KR domain LT978_08040 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_08040 PF16197 Ketoacyl-synthetase C-terminal extension LT978_08040 PF00668 Condensation domain LT978_08040 PF13193 AMP-binding enzyme C-terminal domain LT978_08040 PF00501 AMP-binding enzyme LT978_08040 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_08045 PF14765 Polyketide synthase dehydratase LT978_08045 PF16197 Ketoacyl-synthetase C-terminal extension LT978_08045 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_08045 PF00550 Phosphopantetheine attachment site LT978_08045 PF08242 Methyltransferase domain LT978_08045 PF08659 KR domain LT978_08045 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_08050 PF14765 Polyketide synthase dehydratase LT978_08050 PF00550 Phosphopantetheine attachment site LT978_08050 PF08659 KR domain LT978_08050 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_08050 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_08050 PF16197 Ketoacyl-synthetase C-terminal extension LT978_08050 PF00668 Condensation domain LT978_08050 PF13193 AMP-binding enzyme C-terminal domain LT978_08050 PF00501 AMP-binding enzyme LT978_08055 PF14765 Polyketide synthase dehydratase LT978_08055 PF00501 AMP-binding enzyme LT978_08055 PF13193 AMP-binding enzyme C-terminal domain LT978_08055 PF00668 Condensation domain LT978_08055 PF16197 Ketoacyl-synthetase C-terminal extension LT978_08055 PF08659 KR domain LT978_08055 PF00550 Phosphopantetheine attachment site LT978_08055 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_08055 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_08060 PF14765 Polyketide synthase dehydratase LT978_08060 PF00550 Phosphopantetheine attachment site LT978_08060 PF08242 Methyltransferase domain LT978_08060 PF08659 KR domain LT978_08060 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_08060 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_08060 PF16197 Ketoacyl-synthetase C-terminal extension LT978_08065 PF08659 KR domain LT978_08065 PF14765 Polyketide synthase dehydratase LT978_08065 PF00550 Phosphopantetheine attachment site LT978_08065 PF08242 Methyltransferase domain LT978_08065 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_08065 PF16197 Ketoacyl-synthetase C-terminal extension LT978_08065 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_08070 PF00067 Cytochrome P450 LT978_08075 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal LT978_08075 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal LT978_08080 PF00378 Enoyl-CoA hydratase/isomerase LT978_08085 PF03807 NADP oxidoreductase coenzyme F420-dependent LT978_08085 PF14748 Pyrroline-5-carboxylate reductase dimerisation LT978_08090 PF00753 Metallo-beta-lactamase superfamily LT978_08095 PF00106 short chain dehydrogenase LT978_08100 PF00291 Pyridoxal-phosphate dependent enzyme LT978_08105 PF00485 Phosphoribulokinase / Uridine kinase family LT978_08120 PF01594 AI-2E family transporter LT978_08125 PF14164 YqzH-like protein LT978_08130 PF08863 YolD-like protein LT978_08135 PF11799 impB/mucB/samB family C-terminal domain LT978_08135 PF00817 impB/mucB/samB family LT978_08140 PF00583 Acetyltransferase (GNAT) family LT978_08145 PF03992 Antibiotic biosynthesis monooxygenase LT978_08150 PF04229 GrpB protein LT978_08150 PF13673 Acetyltransferase (GNAT) domain LT978_08155 PF01521 Iron-sulphur cluster biosynthesis LT978_08160 PF10827 Protein of unknown function (DUF2552) LT978_08165 PF12146 Serine aminopeptidase, S33 LT978_08175 PF00248 Aldo/keto reductase family LT978_08180 PF13072 Mother cell inhibitor of FtsZ LT978_08185 PF00293 NUDIX domain LT978_08195 PF01381 Helix-turn-helix LT978_08200 PF00710 Asparaginase, N-terminal LT978_08200 PF17763 Glutaminase/Asparaginase C-terminal domain LT978_08205 PF00206 Lyase LT978_08205 PF10415 Fumarase C C-terminus LT978_08210 PF03553 Na+/H+ antiporter family LT978_08215 PF03949 Malic enzyme, NAD binding domain LT978_08215 PF00390 Malic enzyme, N-terminal domain LT978_08215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LT978_08230 PF01944 Stage II sporulation protein M LT978_08235 PF01475 Ferric uptake regulator family LT978_08240 PF14004 Protein of unknown function (DUF4227) LT978_08245 PF00589 Phage integrase family LT978_08245 PF02899 Phage integrase, N-terminal SAM-like domain LT978_08250 PF01676 Metalloenzyme superfamily LT978_08255 PF01048 Phosphorylase superfamily LT978_08260 PF00768 D-alanyl-D-alanine carboxypeptidase LT978_08260 PF07943 Penicillin-binding protein 5, C-terminal domain LT978_08265 PF01740 STAS domain LT978_08270 PF13581 Histidine kinase-like ATPase domain LT978_08275 PF04539 Sigma-70 region 3 LT978_08275 PF04542 Sigma-70 region 2 LT978_08275 PF04545 Sigma-70, region 4 LT978_08280 PF12164 Stage V sporulation protein AA LT978_08285 PF13782 Stage V sporulation protein AB LT978_08290 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LT978_08295 PF07451 Stage V sporulation protein AD (SpoVAD) LT978_08300 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LT978_08305 PF14097 Stage V sporulation protein AE1 LT978_08310 PF03323 Bacillus/Clostridium GerA spore germination protein LT978_08315 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LT978_08315 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LT978_08320 PF06207 Protein of unknown function (DUF1002) LT978_08325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LT978_08335 PF10502 Signal peptidase, peptidase S26 LT978_08345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LT978_08345 PF01872 RibD C-terminal domain LT978_08350 PF00677 Lumazine binding domain LT978_08355 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LT978_08355 PF00925 GTP cyclohydrolase II LT978_08360 PF00885 6,7-dimethyl-8-ribityllumazine synthase LT978_08365 PF00583 Acetyltransferase (GNAT) family LT978_08370 PF03745 Domain of unknown function (DUF309) LT978_08380 PF02616 Segregation and condensation protein ScpA LT978_08385 PF04079 Segregation and condensation complex subunit ScpB LT978_08390 PF13047 Protein of unknown function (DUF3907) LT978_08395 PF07943 Penicillin-binding protein 5, C-terminal domain LT978_08395 PF00768 D-alanyl-D-alanine carboxypeptidase LT978_08400 PF07670 Nucleoside recognition LT978_08405 PF07670 Nucleoside recognition LT978_08410 PF01479 S4 domain LT978_08410 PF00849 RNA pseudouridylate synthase LT978_08415 PF00578 AhpC/TSA family LT978_08420 PF05140 ResB-like family LT978_08425 PF01578 Cytochrome C assembly protein LT978_08430 PF00486 Transcriptional regulatory protein, C terminal LT978_08430 PF00072 Response regulator receiver domain LT978_08435 PF00989 PAS fold LT978_08435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_08435 PF18698 Histidine kinase sensor domain LT978_08435 PF00512 His Kinase A (phospho-acceptor) domain LT978_08435 PF00672 HAMP domain LT978_08440 PF08281 Sigma-70, region 4 LT978_08440 PF04542 Sigma-70 region 2 LT978_08450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LT978_08450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LT978_08450 PF01842 ACT domain LT978_08455 PF12822 ECF transporter, substrate-specific component LT978_08465 PF14493 Helix-turn-helix domain LT978_08470 PF00270 DEAD/DEAH box helicase LT978_08470 PF00271 Helicase conserved C-terminal domain LT978_08475 PF02517 CPBP intramembrane metalloprotease LT978_08480 PF01476 LysM domain LT978_08485 PF10864 Protein of unknown function (DUF2663) LT978_08490 PF00149 Calcineurin-like phosphoesterase LT978_08495 PF05389 Negative regulator of genetic competence (MecA) LT978_08500 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LT978_08500 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LT978_08510 PF13367 PrsW family intramembrane metalloprotease LT978_08515 PF01471 Putative peptidoglycan binding domain LT978_08515 PF07486 Cell Wall Hydrolase LT978_08520 PF03413 Peptidase propeptide and YPEB domain LT978_08520 PF14620 YpeB sporulation LT978_08525 PF07238 PilZ domain LT978_08525 PF12945 Flagellar protein YcgR LT978_08530 PF17313 Family of unknown function (DUF5359) LT978_08535 PF02224 Cytidylate kinase LT978_08540 PF00575 S1 RNA binding domain LT978_08545 PF01070 FMN-dependent dehydrogenase LT978_08550 PF14140 YpzI-like protein LT978_08560 PF01926 50S ribosome-binding GTPase LT978_08560 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LT978_08565 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LT978_08565 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LT978_08570 PF10966 Protein of unknown function (DUF2768) LT978_08580 PF09547 Stage IV sporulation protein A (spore_IV_A) LT978_08585 PF00216 Bacterial DNA-binding protein LT978_08590 PF01227 GTP cyclohydrolase I LT978_08595 PF02081 Tryptophan RNA-binding attenuator protein LT978_08600 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 LT978_08605 PF01209 ubiE/COQ5 methyltransferase family LT978_08610 PF00348 Polyprenyl synthetase LT978_08615 PF00334 Nucleoside diphosphate kinase LT978_08620 PF03705 CheR methyltransferase, all-alpha domain LT978_08620 PF01739 CheR methyltransferase, SAM binding domain LT978_08625 PF01264 Chorismate synthase LT978_08630 PF01761 3-dehydroquinate synthase LT978_08635 PF07736 Chorismate mutase type I LT978_08640 PF04715 Anthranilate synthase component I, N terminal region LT978_08640 PF00425 chorismate binding enzyme LT978_08645 PF00591 Glycosyl transferase family, a/b domain LT978_08645 PF02885 Glycosyl transferase family, helical bundle domain LT978_08650 PF00218 Indole-3-glycerol phosphate synthase LT978_08655 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LT978_08660 PF00291 Pyridoxal-phosphate dependent enzyme LT978_08665 PF00290 Tryptophan synthase alpha chain LT978_08670 PF00155 Aminotransferase class I and II LT978_08675 PF02153 Prephenate dehydrogenase LT978_08675 PF01842 ACT domain LT978_08680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LT978_08690 PF08864 UPF0302 domain LT978_08690 PF08858 IDEAL domain LT978_08695 PF10673 Protein of unknown function (DUF2487) LT978_08700 PF00355 Rieske [2Fe-2S] domain LT978_08705 PF00033 Cytochrome b/b6/petB LT978_08710 PF00032 Cytochrome b(C-terminal)/b6/petD LT978_08710 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LT978_08715 PF07187 Protein of unknown function (DUF1405) LT978_08720 PF09577 Sporulation protein YpjB (SpoYpjB) LT978_08725 PF00190 Cupin LT978_08730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LT978_08730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LT978_08735 PF03819 MazG nucleotide pyrophosphohydrolase domain LT978_08740 PF05173 Dihydrodipicolinate reductase, C-terminus LT978_08740 PF01113 Dihydrodipicolinate reductase, N-terminus LT978_08745 PF02142 MGS-like domain LT978_08750 PF02585 GlcNAc-PI de-N-acetylase LT978_08755 PF13439 Glycosyltransferase Family 4 LT978_08755 PF00534 Glycosyl transferases group 1 LT978_08760 PF13735 tRNA nucleotidyltransferase domain 2 putative LT978_08760 PF12627 Probable RNA and SrmB- binding site of polymerase A LT978_08760 PF01743 Poly A polymerase head domain LT978_08765 PF03099 Biotin/lipoate A/B protein ligase family LT978_08765 PF08279 HTH domain LT978_08765 PF02237 Biotin protein ligase C terminal domain LT978_08770 PF02548 Ketopantoate hydroxymethyltransferase LT978_08775 PF02569 Pantoate-beta-alanine ligase LT978_08780 PF02261 Aspartate decarboxylase LT978_08785 PF00929 Exonuclease LT978_08785 PF13307 Helicase C-terminal domain LT978_08785 PF04851 Type III restriction enzyme, res subunit LT978_08790 PF14084 Protein of unknown function (DUF4264) LT978_08795 PF17881 Domain of unknown function (DUF5590) LT978_08795 PF03413 Peptidase propeptide and YPEB domain LT978_08800 PF00155 Aminotransferase class I and II LT978_08805 PF00152 tRNA synthetases class II (D, K and N) LT978_08805 PF01336 OB-fold nucleic acid binding domain LT978_08810 PF07261 Replication initiation and membrane attachment LT978_08815 PF10576 Iron-sulfur binding domain of endonuclease III LT978_08815 PF00633 Helix-hairpin-helix motif LT978_08815 PF00730 HhH-GPD superfamily base excision DNA repair protein LT978_08825 PF00912 Transglycosylase LT978_08825 PF00905 Penicillin binding protein transpeptidase domain LT978_08830 PF03838 Recombination protein U LT978_08835 PF10720 Protein of unknown function (DUF2515) LT978_08845 PF17522 Family of unknown function (DUF5446) LT978_08850 PF08807 Bacterial domain of unknown function (DUF1798) LT978_08855 PF14178 YppF-like protein LT978_08860 PF14179 YppG-like protein LT978_08870 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LT978_08875 PF00270 DEAD/DEAH box helicase LT978_08875 PF09369 Domain of unknown function (DUF1998) LT978_08875 PF00271 Helicase conserved C-terminal domain LT978_08880 PF13482 RNase_H superfamily LT978_08890 PF11122 Inner spore coat protein D LT978_08895 PF06908 YspA SLOG family LT978_08900 PF05103 DivIVA protein LT978_08910 PF02926 THUMP domain LT978_08910 PF01170 Putative RNA methylase family UPF0020 LT978_08920 PF14139 YpzG-like protein LT978_08930 PF13307 Helicase C-terminal domain LT978_08935 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LT978_08940 PF00156 Phosphoribosyl transferase domain LT978_08945 PF00860 Permease family LT978_08955 PF00857 Isochorismatase family LT978_08980 PF02797 Chalcone and stilbene synthases, C-terminal domain LT978_08980 PF00195 Chalcone and stilbene synthases, N-terminal domain LT978_08985 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family LT978_08995 PF00350 Dynamin family LT978_09000 PF10752 Protein of unknown function (DUF2533) LT978_09010 PF01367 5'-3' exonuclease, C-terminal SAM fold LT978_09010 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LT978_09020 PF13456 Reverse transcriptase-like LT978_09025 PF02592 Putative vitamin uptake transporter LT978_09030 PF13456 Reverse transcriptase-like LT978_09035 PF10782 Zinc-finger LT978_09040 PF10819 Protein of unknown function (DUF2564) LT978_09050 PF00313 'Cold-shock' DNA-binding domain LT978_09060 PF00534 Glycosyl transferases group 1 LT978_09060 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LT978_09065 PF04204 Homoserine O-succinyltransferase LT978_09070 PF00255 Glutathione peroxidase LT978_09075 PF01966 HD domain LT978_09080 PF08712 Scaffold protein Nfu/NifU N terminal LT978_09080 PF13769 Virulence factor LT978_09085 PF00920 Dehydratase family LT978_09090 PF06491 Disulphide isomerase LT978_09095 PF04445 Putative SAM-dependent methyltransferase LT978_09100 PF14005 YpjP-like protein LT978_09105 PF00303 Thymidylate synthase LT978_09110 PF00186 Dihydrofolate reductase LT978_09120 PF03006 Haemolysin-III related LT978_09125 PF00158 Sigma-54 interaction domain LT978_09125 PF08461 Ribonuclease R winged-helix domain LT978_09130 PF00291 Pyridoxal-phosphate dependent enzyme LT978_09130 PF00585 C-terminal regulatory domain of Threonine dehydratase LT978_09135 PF10751 Protein of unknown function (DUF2535) LT978_09140 PF02630 SCO1/SenC LT978_09145 PF13472 GDSL-like Lipase/Acylhydrolase family LT978_09150 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) LT978_09155 PF01047 MarR family LT978_09160 PF01625 Peptide methionine sulfoxide reductase LT978_09165 PF01641 SelR domain LT978_09170 PF02719 Polysaccharide biosynthesis protein LT978_09190 PF09346 SMI1 / KNR4 family (SUKH-1) LT978_09195 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH LT978_09195 PF04740 LXG domain of WXG superfamily LT978_09230 PF16219 Domain of unknown function (DUF4879) LT978_09250 PF18801 response regulator aspartate phosphatase H, N terminal LT978_09290 PF11518 Protein of unknown function (DUF3221) LT978_09305 PF08485 Polysaccharide biosynthesis protein C-terminal LT978_09305 PF02719 Polysaccharide biosynthesis protein LT978_09310 PF02333 Phytase LT978_09315 PF12996 DUF based on E. rectale Gene description (DUF3880) LT978_09330 PF00535 Glycosyl transferase family 2 LT978_09335 PF00583 Acetyltransferase (GNAT) family LT978_09350 PF00202 Aminotransferase class-III LT978_09355 PF01144 Coenzyme A transferase LT978_09360 PF01144 Coenzyme A transferase LT978_09365 PF01546 Peptidase family M20/M25/M40 LT978_09365 PF07687 Peptidase dimerisation domain LT978_09370 PF00583 Acetyltransferase (GNAT) family LT978_09375 PF12544 Lysine-2,3-aminomutase LT978_09380 PF14122 YokU-like protein, putative antitoxin LT978_09385 PF06855 YozE SAM-like fold LT978_09405 PF14162 YozD-like protein LT978_09410 PF01569 PAP2 superfamily LT978_09415 PF14191 YodL-like LT978_09425 PF01048 Phosphorylase superfamily LT978_09430 PF02557 D-alanyl-D-alanine carboxypeptidase LT978_09440 PF08241 Methyltransferase domain LT978_09445 PF17820 PDZ domain LT978_09445 PF03572 Peptidase family S41 LT978_09445 PF01471 Putative peptidoglycan binding domain LT978_09450 PF07702 UTRA domain LT978_09450 PF00392 Bacterial regulatory proteins, gntR family LT978_09455 PF00232 Glycosyl hydrolase family 1 LT978_09465 PF00474 Sodium:solute symporter family LT978_09470 PF11755 Protein of unknown function (DUF3311) LT978_09475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LT978_09480 PF01738 Dienelactone hydrolase family LT978_09485 PF00881 Nitroreductase family LT978_09490 PF01638 HxlR-like helix-turn-helix LT978_09500 PF14552 Tautomerase enzyme LT978_09515 PF00892 EamA-like transporter family LT978_09525 PF08830 Protein of unknown function (DUF1806) LT978_09530 PF02585 GlcNAc-PI de-N-acetylase LT978_09535 PF01740 STAS domain LT978_09540 PF01554 MatE LT978_09545 PF10372 Bacterial membrane-spanning protein N-terminus LT978_09545 PF02457 DisA bacterial checkpoint controller nucleotide-binding LT978_09550 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LT978_09555 PF01476 LysM domain LT978_09555 PF00877 NlpC/P60 family LT978_09560 PF13627 Prokaryotic lipoprotein-attachment site LT978_09560 PF00080 Copper/zinc superoxide dismutase (SODC) LT978_09565 PF07728 AAA domain (dynein-related subfamily) LT978_09570 PF00092 von Willebrand factor type A domain LT978_09575 PF00676 Dehydrogenase E1 component LT978_09575 PF16870 2-oxoglutarate dehydrogenase C-terminal LT978_09575 PF02779 Transketolase, pyrimidine binding domain LT978_09580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LT978_09580 PF00364 Biotin-requiring enzyme LT978_09580 PF02817 e3 binding domain LT978_09585 PF00753 Metallo-beta-lactamase superfamily LT978_09590 PF01758 Sodium Bile acid symporter family LT978_09595 PF00209 Sodium:neurotransmitter symporter family LT978_09600 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LT978_09600 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LT978_09605 PF13243 Squalene-hopene cyclase C-terminal domain LT978_09605 PF13249 Squalene-hopene cyclase N-terminal domain LT978_09610 PF00171 Aldehyde dehydrogenase family LT978_09625 PF08000 Bacterial PH domain LT978_09640 PF00011 Hsp20/alpha crystallin family LT978_09655 PF01258 Prokaryotic dksA/traR C4-type zinc finger LT978_09660 PF02525 Flavodoxin-like fold LT978_09670 PF00270 DEAD/DEAH box helicase LT978_09670 PF00271 Helicase conserved C-terminal domain LT978_09670 PF00570 HRDC domain LT978_09670 PF16124 RecQ zinc-binding LT978_09670 PF09382 RQC domain LT978_09675 PF06725 3D domain LT978_09675 PF01476 LysM domain LT978_09685 PF02016 LD-carboxypeptidase N-terminal domain LT978_09685 PF17676 LD-carboxypeptidase C-terminal domain LT978_09695 PF18846 Bacterial archaeo-eukaryotic release factor family 5 LT978_09700 PF04238 Protein of unknown function (DUF420) LT978_09710 PF01022 Bacterial regulatory protein, arsR family LT978_09720 PF00753 Metallo-beta-lactamase superfamily LT978_09725 PF13305 Tetracyclin repressor-like, C-terminal domain LT978_09725 PF00440 Bacterial regulatory proteins, tetR family LT978_09730 PF07883 Cupin domain LT978_09730 PF12833 Helix-turn-helix domain LT978_09735 PF01588 Putative tRNA binding domain LT978_09740 PF01638 HxlR-like helix-turn-helix LT978_09765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LT978_09765 PF00384 Molybdopterin oxidoreductase LT978_09765 PF01568 Molydopterin dinucleotide binding domain LT978_09770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LT978_09770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LT978_09775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LT978_09775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LT978_09780 PF07690 Major Facilitator Superfamily LT978_09790 PF06103 Bacterial protein of unknown function (DUF948) LT978_09795 PF00106 short chain dehydrogenase LT978_09800 PF02334 Replication terminator protein LT978_09805 PF03807 NADP oxidoreductase coenzyme F420-dependent LT978_09805 PF14748 Pyrroline-5-carboxylate reductase dimerisation LT978_09810 PF00696 Amino acid kinase family LT978_09810 PF01472 PUA domain LT978_09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_09815 PF03466 LysR substrate binding domain LT978_09820 PF00310 Glutamine amidotransferases class-II LT978_09820 PF04898 Glutamate synthase central domain LT978_09820 PF01645 Conserved region in glutamate synthase LT978_09820 PF01493 GXGXG motif LT978_09825 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LT978_09825 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT978_09830 PF00107 Zinc-binding dehydrogenase LT978_09830 PF08240 Alcohol dehydrogenase GroES-like domain LT978_09835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_09835 PF03466 LysR substrate binding domain LT978_09840 PF02824 TGS domain LT978_09840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LT978_09840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LT978_09840 PF03129 Anticodon binding domain LT978_09850 PF07690 Major Facilitator Superfamily LT978_09860 PF12728 Helix-turn-helix domain LT978_09865 PF00589 Phage integrase family LT978_09875 PF16800 IseA DL-endopeptidase inhibitor LT978_09880 PF01554 MatE LT978_09885 PF01263 Aldose 1-epimerase LT978_09890 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LT978_09895 PF00501 AMP-binding enzyme LT978_09895 PF00550 Phosphopantetheine attachment site LT978_09895 PF00668 Condensation domain LT978_09895 PF13193 AMP-binding enzyme C-terminal domain LT978_09900 PF00668 Condensation domain LT978_09900 PF13193 AMP-binding enzyme C-terminal domain LT978_09900 PF00501 AMP-binding enzyme LT978_09900 PF00550 Phosphopantetheine attachment site LT978_09905 PF00501 AMP-binding enzyme LT978_09905 PF13193 AMP-binding enzyme C-terminal domain LT978_09905 PF00668 Condensation domain LT978_09905 PF00550 Phosphopantetheine attachment site LT978_09910 PF00501 AMP-binding enzyme LT978_09910 PF13193 AMP-binding enzyme C-terminal domain LT978_09910 PF00668 Condensation domain LT978_09910 PF00550 Phosphopantetheine attachment site LT978_09915 PF00501 AMP-binding enzyme LT978_09915 PF00975 Thioesterase domain LT978_09915 PF00550 Phosphopantetheine attachment site LT978_09915 PF00668 Condensation domain LT978_09915 PF13193 AMP-binding enzyme C-terminal domain LT978_09920 PF07098 Protein of unknown function (DUF1360) LT978_09925 PF02638 Glycosyl hydrolase-like 10 LT978_09930 PF02770 Acyl-CoA dehydrogenase, middle domain LT978_09930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LT978_09930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LT978_09935 PF13193 AMP-binding enzyme C-terminal domain LT978_09935 PF00501 AMP-binding enzyme LT978_09940 PF02785 Biotin carboxylase C-terminal domain LT978_09940 PF00289 Biotin carboxylase, N-terminal domain LT978_09940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LT978_09945 PF00364 Biotin-requiring enzyme LT978_09950 PF00682 HMGL-like LT978_09955 PF00378 Enoyl-CoA hydratase/isomerase LT978_09960 PF01039 Carboxyl transferase domain LT978_09965 PF09335 SNARE associated Golgi protein LT978_09970 PF00483 Nucleotidyl transferase LT978_09975 PF04138 GtrA-like protein LT978_09980 PF03744 6-carboxyhexanoate--CoA ligase LT978_09985 PF00202 Aminotransferase class-III LT978_09990 PF00155 Aminotransferase class I and II LT978_10000 PF04055 Radical SAM superfamily LT978_10000 PF06968 Biotin and Thiamin Synthesis associated domain LT978_10005 PF00067 Cytochrome P450 LT978_10015 PF01144 Coenzyme A transferase LT978_10020 PF01144 Coenzyme A transferase LT978_10030 PF00698 Acyl transferase domain LT978_10035 PF13193 AMP-binding enzyme C-terminal domain LT978_10035 PF00202 Aminotransferase class-III LT978_10035 PF00501 AMP-binding enzyme LT978_10035 PF00668 Condensation domain LT978_10035 PF16197 Ketoacyl-synthetase C-terminal extension LT978_10035 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_10035 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_10035 PF00550 Phosphopantetheine attachment site LT978_10040 PF00550 Phosphopantetheine attachment site LT978_10040 PF00501 AMP-binding enzyme LT978_10040 PF13193 AMP-binding enzyme C-terminal domain LT978_10040 PF00668 Condensation domain LT978_10045 PF00501 AMP-binding enzyme LT978_10045 PF13193 AMP-binding enzyme C-terminal domain LT978_10045 PF00975 Thioesterase domain LT978_10045 PF00550 Phosphopantetheine attachment site LT978_10045 PF00668 Condensation domain LT978_10050 PF04616 Glycosyl hydrolases family 43 LT978_10050 PF03422 Carbohydrate binding module (family 6) LT978_10055 PF17189 Glycosyl hydrolase family 30 beta sandwich domain LT978_10055 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain LT978_10060 PF00072 Response regulator receiver domain LT978_10060 PF00486 Transcriptional regulatory protein, C terminal LT978_10065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_10065 PF00512 His Kinase A (phospho-acceptor) domain LT978_10075 PF00150 Cellulase (glycosyl hydrolase family 5) LT978_10075 PF00942 Cellulose binding domain LT978_10100 PF14158 YndJ-like protein LT978_10105 PF13761 Domain of unknown function (DUF4166) LT978_10115 PF07690 Major Facilitator Superfamily LT978_10120 PF00356 Bacterial regulatory proteins, lacI family LT978_10125 PF00106 short chain dehydrogenase LT978_10130 PF03786 D-mannonate dehydratase (UxuA) LT978_10135 PF01081 KDPG and KHG aldolase LT978_10140 PF00107 Zinc-binding dehydrogenase LT978_10140 PF08240 Alcohol dehydrogenase GroES-like domain LT978_10145 PF00294 pfkB family carbohydrate kinase LT978_10150 PF01235 Sodium:alanine symporter family LT978_10160 PF03989 DNA gyrase C-terminal domain, beta-propeller LT978_10160 PF00521 DNA gyrase/topoisomerase IV, subunit A LT978_10165 PF00986 DNA gyrase B subunit, carboxyl terminus LT978_10165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_10165 PF01751 Toprim domain LT978_10165 PF00204 DNA gyrase B LT978_10170 PF13380 CoA binding domain LT978_10175 PF02660 Glycerol-3-phosphate acyltransferase LT978_10180 PF01521 Iron-sulphur cluster biosynthesis LT978_10190 PF03061 Thioesterase superfamily LT978_10200 PF08177 Small acid-soluble spore protein N family LT978_10205 PF13040 Fur-regulated basic protein B LT978_10210 PF00578 AhpC/TSA family LT978_10215 PF00694 Aconitase C-terminal domain LT978_10215 PF00330 Aconitase family (aconitate hydratase) LT978_10225 PF08179 Small acid-soluble spore protein P family LT978_10235 PF11084 Protein of unknown function (DUF2621) LT978_10240 PF07301 Protein of unknown function (DUF1453) LT978_10245 PF00072 Response regulator receiver domain LT978_10250 PF02683 Cytochrome C biogenesis protein transmembrane region LT978_10255 PF09388 Spo0E like sporulation regulatory protein LT978_10260 PF03672 Uncharacterised protein family (UPF0154) LT978_10265 PF10747 Sporulation inhibitor of replication protein SirA LT978_10270 PF02779 Transketolase, pyrimidine binding domain LT978_10270 PF02780 Transketolase, C-terminal domain LT978_10270 PF00456 Transketolase, thiamine diphosphate binding domain LT978_10275 PF05979 Bacterial protein of unknown function (DUF896) LT978_10280 PF00239 Resolvase, N terminal domain LT978_10285 PF01476 LysM domain LT978_10290 PF01726 LexA DNA binding domain LT978_10290 PF00717 Peptidase S24-like LT978_10300 PF10710 Protein of unknown function (DUF2512) LT978_10315 PF05908 Poly-gamma-glutamate hydrolase LT978_10320 PF00692 dUTPase LT978_10325 PF12708 Pectate lyase superfamily protein LT978_10325 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain LT978_10340 PF09680 Family of unknown function LT978_10345 PF18416 N-acetylglucosamine binding protein domain 2 LT978_10345 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LT978_10355 PF13021 Domain of unknown function (DUF3885) LT978_10365 PF00583 Acetyltransferase (GNAT) family LT978_10365 PF14268 YoaP-like LT978_10370 PF17094 Uncharacterised protein family (UPF0715) LT978_10385 PF08240 Alcohol dehydrogenase GroES-like domain LT978_10385 PF00107 Zinc-binding dehydrogenase LT978_10390 PF05163 DinB family LT978_10395 PF13280 WYL domain LT978_10395 PF08279 HTH domain LT978_10415 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LT978_10415 PF00391 PEP-utilising enzyme, mobile domain LT978_10420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LT978_10420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LT978_10425 PF01261 Xylose isomerase-like TIM barrel LT978_10430 PF00480 ROK family LT978_10435 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LT978_10435 PF04616 Glycosyl hydrolases family 43 LT978_10450 PF00120 Glutamine synthetase, catalytic domain LT978_10450 PF03951 Glutamine synthetase, beta-Grasp domain LT978_10455 PF13411 MerR HTH family regulatory protein LT978_10460 PF06838 Methionine gamma-lyase LT978_10465 PF13167 GTP-binding GTPase N-terminal LT978_10465 PF01926 50S ribosome-binding GTPase LT978_10465 PF16360 GTP-binding GTPase Middle Region LT978_10470 PF00004 ATPase family associated with various cellular activities (AAA) LT978_10470 PF17866 AAA lid domain LT978_10475 PF01520 N-acetylmuramoyl-L-alanine amidase LT978_10475 PF05036 Sporulation related domain LT978_10485 PF00268 Ribonucleotide reductase, small chain LT978_10490 PF02867 Ribonucleotide reductase, barrel domain LT978_10490 PF00317 Ribonucleotide reductase, all-alpha domain LT978_10490 PF08343 Ribonucleotide reductase N-terminal LT978_10495 PF07972 NrdI Flavodoxin like LT978_10505 PF14157 YmzC-like protein LT978_10510 PF17209 Hfq protein LT978_10520 PF12788 YmaF family LT978_10530 PF00893 Small Multidrug Resistance protein LT978_10535 PF00893 Small Multidrug Resistance protein LT978_10540 PF02566 OsmC-like protein LT978_10545 PF05908 Poly-gamma-glutamate hydrolase LT978_10555 PF00082 Subtilase family LT978_10565 PF06912 Protein of unknown function (DUF1275) LT978_10570 PF14040 Deoxyribonuclease NucA/NucB LT978_10575 PF00067 Cytochrome P450 LT978_10580 PF00550 Phosphopantetheine attachment site LT978_10580 PF14765 Polyketide synthase dehydratase LT978_10580 PF00975 Thioesterase domain LT978_10580 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_10580 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_10580 PF16197 Ketoacyl-synthetase C-terminal extension LT978_10580 PF08242 Methyltransferase domain LT978_10585 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_10585 PF00501 AMP-binding enzyme LT978_10585 PF13193 AMP-binding enzyme C-terminal domain LT978_10585 PF00668 Condensation domain LT978_10585 PF16197 Ketoacyl-synthetase C-terminal extension LT978_10585 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_10585 PF00550 Phosphopantetheine attachment site LT978_10585 PF14765 Polyketide synthase dehydratase LT978_10585 PF08659 KR domain LT978_10590 PF14765 Polyketide synthase dehydratase LT978_10590 PF00550 Phosphopantetheine attachment site LT978_10590 PF08242 Methyltransferase domain LT978_10590 PF08659 KR domain LT978_10590 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_10590 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_10590 PF16197 Ketoacyl-synthetase C-terminal extension LT978_10590 PF00550 Phosphopantetheine attachment site LT978_10590 PF08242 Methyltransferase domain LT978_10590 PF08659 KR domain LT978_10590 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_10590 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_10590 PF14765 Polyketide synthase dehydratase LT978_10590 PF16197 Ketoacyl-synthetase C-terminal extension LT978_10595 PF14765 Polyketide synthase dehydratase LT978_10595 PF16197 Ketoacyl-synthetase C-terminal extension LT978_10595 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_10595 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_10595 PF08659 KR domain LT978_10595 PF00550 Phosphopantetheine attachment site LT978_10600 PF00501 AMP-binding enzyme LT978_10600 PF13193 AMP-binding enzyme C-terminal domain LT978_10600 PF00668 Condensation domain LT978_10600 PF16197 Ketoacyl-synthetase C-terminal extension LT978_10600 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_10600 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_10600 PF08659 KR domain LT978_10600 PF00550 Phosphopantetheine attachment site LT978_10600 PF14765 Polyketide synthase dehydratase LT978_10605 PF00378 Enoyl-CoA hydratase/isomerase LT978_10610 PF00378 Enoyl-CoA hydratase/isomerase LT978_10615 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal LT978_10615 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal LT978_10620 PF00550 Phosphopantetheine attachment site LT978_10625 PF00698 Acyl transferase domain LT978_10630 PF00698 Acyl transferase domain LT978_10635 PF00698 Acyl transferase domain LT978_10640 PF00753 Metallo-beta-lactamase superfamily LT978_10650 PF01119 DNA mismatch repair protein, C-terminal domain LT978_10650 PF08676 MutL C terminal dimerisation domain LT978_10655 PF01624 MutS domain I LT978_10655 PF05188 MutS domain II LT978_10655 PF05192 MutS domain III LT978_10655 PF05190 MutS family domain IV LT978_10655 PF00488 MutS domain V LT978_10660 PF10628 Outer spore coat protein E (CotE) LT978_10665 PF06133 Control of competence regulator ComK, YlbF/YmcA LT978_10670 PF01938 TRAM domain LT978_10670 PF00919 Uncharacterized protein family UPF0004 LT978_10670 PF04055 Radical SAM superfamily LT978_10675 PF00155 Aminotransferase class I and II LT978_10680 PF08240 Alcohol dehydrogenase GroES-like domain LT978_10680 PF00107 Zinc-binding dehydrogenase LT978_10685 PF04232 Stage V sporulation protein S (SpoVS) LT978_10690 PF13277 YmdB-like protein LT978_10695 PF01966 HD domain LT978_10695 PF00013 KH domain LT978_10695 PF12072 Domain of unknown function (DUF3552) LT978_10700 PF00144 Beta-lactamase LT978_10705 PF00154 recA bacterial DNA recombination protein LT978_10710 PF00994 Probable molybdopterin binding domain LT978_10710 PF18146 Damage-inducible protein CinA KH domain LT978_10710 PF02464 Competence-damaged protein LT978_10715 PF01066 CDP-alcohol phosphatidyltransferase LT978_10720 PF13464 Domain of unknown function (DUF4115) LT978_10725 PF11868 Protein of unknown function (DUF3388) LT978_10730 PF11588 Protein of unknown function (DUF3243) LT978_10740 PF05193 Peptidase M16 inactive domain LT978_10740 PF00675 Insulinase (Peptidase family M16) LT978_10745 PF05193 Peptidase M16 inactive domain LT978_10750 PF03176 MMPL family LT978_10755 PF01047 MarR family LT978_10760 PF07690 Major Facilitator Superfamily LT978_10765 PF07702 UTRA domain LT978_10765 PF00392 Bacterial regulatory proteins, gntR family LT978_10770 PF01580 FtsK/SpoIIIE family LT978_10770 PF09397 Ftsk gamma domain LT978_10770 PF17854 FtsK alpha domain LT978_10775 PF14035 YlzJ-like protein LT978_10780 PF00574 Clp protease LT978_10785 PF17770 Ribonuclease J C-terminal domain LT978_10785 PF00753 Metallo-beta-lactamase superfamily LT978_10785 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LT978_10790 PF00701 Dihydrodipicolinate synthetase family LT978_10795 PF00696 Amino acid kinase family LT978_10795 PF13840 ACT domain LT978_10800 PF01118 Semialdehyde dehydrogenase, NAD binding domain LT978_10800 PF02774 Semialdehyde dehydrogenase, dimerisation domain LT978_10805 PF02441 Flavoprotein LT978_10810 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LT978_10810 PF16924 Dipicolinate synthase subunit A N-terminal domain LT978_10815 PF05239 PRC-barrel domain LT978_10820 PF05193 Peptidase M16 inactive domain LT978_10820 PF00675 Insulinase (Peptidase family M16) LT978_10825 PF01522 Polysaccharide deacetylase LT978_10830 PF00013 KH domain LT978_10830 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LT978_10830 PF01138 3' exoribonuclease family, domain 1 LT978_10830 PF03725 3' exoribonuclease family, domain 2 LT978_10830 PF00575 S1 RNA binding domain LT978_10835 PF00312 Ribosomal protein S15 LT978_10840 PF01687 Riboflavin kinase LT978_10840 PF06574 FAD synthetase LT978_10845 PF01509 TruB family pseudouridylate synthase (N terminal domain) LT978_10845 PF16198 tRNA pseudouridylate synthase B C-terminal domain LT978_10850 PF02033 Ribosome-binding factor A LT978_10855 PF04456 Protein of unknown function (DUF503) LT978_10860 PF00009 Elongation factor Tu GTP binding domain LT978_10860 PF11987 Translation-initiation factor 2 LT978_10860 PF04760 Translation initiation factor IF-2, N-terminal region LT978_10865 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LT978_10870 PF04296 Protein of unknown function (DUF448) LT978_10875 PF13184 NusA-like KH domain LT978_10875 PF08529 NusA N-terminal domain LT978_10875 PF00575 S1 RNA binding domain LT978_10880 PF02576 RimP N-terminal domain LT978_10880 PF17384 RimP C-terminal SH3 domain LT978_10890 PF03129 Anticodon binding domain LT978_10890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LT978_10890 PF04073 Aminoacyl-tRNA editing domain LT978_10895 PF17820 PDZ domain LT978_10895 PF02163 Peptidase family M50 LT978_10900 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LT978_10900 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LT978_10900 PF13288 DXP reductoisomerase C-terminal domain LT978_10910 PF01255 Putative undecaprenyl diphosphate synthase LT978_10915 PF01765 Ribosome recycling factor LT978_10920 PF00696 Amino acid kinase family LT978_10925 PF00889 Elongation factor TS LT978_10930 PF00318 Ribosomal protein S2 LT978_10940 PF04542 Sigma-70 region 2 LT978_10940 PF04539 Sigma-70 region 3 LT978_10940 PF04545 Sigma-70, region 4 LT978_10945 PF03975 CheD chemotactic sensory transduction LT978_10950 PF04509 CheC-like family LT978_10955 PF01584 CheW-like domain LT978_10960 PF01584 CheW-like domain LT978_10960 PF02895 Signal transducing histidine kinase, homodimeric domain LT978_10960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_10960 PF01627 Hpt domain LT978_10960 PF07194 P2 response regulator binding domain LT978_10965 PF00072 Response regulator receiver domain LT978_10965 PF01339 CheB methylesterase LT978_10970 PF10609 NUBPL iron-transfer P-loop NTPase LT978_10975 PF00448 SRP54-type protein, GTPase domain LT978_10980 PF00771 FHIPEP family LT978_10985 PF01312 FlhB HrpN YscU SpaS Family LT978_10990 PF01311 Bacterial export proteins, family 1 LT978_10995 PF01313 Bacterial export proteins, family 3 LT978_11000 PF00813 FliP family LT978_11005 PF04347 Flagellar biosynthesis protein, FliO LT978_11010 PF00072 Response regulator receiver domain LT978_11015 PF04509 CheC-like family LT978_11015 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LT978_11020 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LT978_11020 PF02154 Flagellar motor switch protein FliM LT978_11025 PF03748 Flagellar basal body-associated protein FliL LT978_11030 PF06289 Flagellar and Swarming motility proteins LT978_11035 PF00460 Flagella basal body rod protein LT978_11035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LT978_11040 PF03963 Flagellar hook capping protein - N-terminal region LT978_11045 PF02120 Flagellar hook-length control protein FliK LT978_11050 PF03448 MgtE intracellular N domain LT978_11055 PF02050 Flagellar FliJ protein LT978_11060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LT978_11060 PF02874 ATP synthase alpha/beta family, beta-barrel domain LT978_11060 PF18269 T3SS EscN ATPase C-terminal domain LT978_11065 PF02108 Flagellar assembly protein FliH LT978_11070 PF01706 FliG C-terminal domain LT978_11070 PF14841 FliG middle domain LT978_11070 PF14842 FliG N-terminal domain LT978_11075 PF01514 Secretory protein of YscJ/FliF family LT978_11075 PF08345 Flagellar M-ring protein C-terminal LT978_11080 PF02049 Flagellar hook-basal body complex protein FliE LT978_11085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LT978_11085 PF00460 Flagella basal body rod protein LT978_11090 PF00460 Flagella basal body rod protein LT978_11095 PF06018 CodY GAF-like domain LT978_11095 PF08222 CodY helix-turn-helix domain LT978_11100 PF00004 ATPase family associated with various cellular activities (AAA) LT978_11100 PF07724 AAA domain (Cdc48 subfamily) LT978_11100 PF10431 C-terminal, D2-small domain, of ClpB protein LT978_11105 PF00227 Proteasome subunit LT978_11110 PF02899 Phage integrase, N-terminal SAM-like domain LT978_11110 PF00589 Phage integrase family LT978_11115 PF01134 Glucose inhibited division protein A LT978_11120 PF01396 Topoisomerase DNA binding C4 zinc finger LT978_11120 PF01131 DNA topoisomerase LT978_11120 PF01751 Toprim domain LT978_11125 PF02481 DNA recombination-mediator protein A LT978_11130 PF00549 CoA-ligase LT978_11130 PF02629 CoA binding domain LT978_11135 PF00549 CoA-ligase LT978_11135 PF08442 ATP-grasp domain LT978_11140 PF01312 FlhB HrpN YscU SpaS Family LT978_11150 PF01351 Ribonuclease HII LT978_11155 PF01926 50S ribosome-binding GTPase LT978_11160 PF01245 Ribosomal protein L19 LT978_11165 PF01746 tRNA (Guanine-1)-methyltransferase LT978_11170 PF01782 RimM N-terminal domain LT978_11170 PF05239 PRC-barrel domain LT978_11175 PF11068 YlqD protein LT978_11185 PF00886 Ribosomal protein S16 LT978_11190 PF00448 SRP54-type protein, GTPase domain LT978_11190 PF02881 SRP54-type protein, helical bundle domain LT978_11190 PF02978 Signal peptide binding domain LT978_11195 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LT978_11205 PF00448 SRP54-type protein, GTPase domain LT978_11205 PF02881 SRP54-type protein, helical bundle domain LT978_11210 PF02463 RecF/RecN/SMC N terminal domain LT978_11210 PF06470 SMC proteins Flexible Hinge Domain LT978_11215 PF00035 Double-stranded RNA binding motif LT978_11215 PF14622 Ribonuclease-III-like LT978_11220 PF00550 Phosphopantetheine attachment site LT978_11230 PF00698 Acyl transferase domain LT978_11235 PF02504 Fatty acid synthesis protein LT978_11240 PF03061 Thioesterase superfamily LT978_11245 PF00270 DEAD/DEAH box helicase LT978_11245 PF00271 Helicase conserved C-terminal domain LT978_11245 PF17191 RecG wedge domain LT978_11250 PF03313 Serine dehydratase alpha chain LT978_11255 PF01842 ACT domain LT978_11255 PF03315 Serine dehydratase beta chain LT978_11260 PF13684 Dihydroxyacetone kinase family LT978_11260 PF02734 DAK2 domain LT978_11265 PF03780 Asp23 family, cell envelope-related function LT978_11270 PF00830 Ribosomal L28 family LT978_11275 PF08183 Stage V sporulation protein family LT978_11280 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LT978_11280 PF04263 Thiamin pyrophosphokinase, catalytic domain LT978_11285 PF00834 Ribulose-phosphate 3 epimerase family LT978_11290 PF03193 RsgA GTPase LT978_11290 PF16745 RsgA N-terminal domain LT978_11295 PF00069 Protein kinase domain LT978_11295 PF03793 PASTA domain LT978_11305 PF04055 Radical SAM superfamily LT978_11310 PF01189 16S rRNA methyltransferase RsmB/F LT978_11310 PF01029 NusB family LT978_11315 PF02911 Formyl transferase, C-terminal domain LT978_11315 PF00551 Formyl transferase LT978_11320 PF01327 Polypeptide deformylase LT978_11325 PF00271 Helicase conserved C-terminal domain LT978_11325 PF17764 3′ DNA-binding domain (3′BD) LT978_11325 PF04851 Type III restriction enzyme, res subunit LT978_11325 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LT978_11325 PF18074 Primosomal protein N C-terminal domain LT978_11330 PF04127 DNA / pantothenate metabolism flavoprotein LT978_11330 PF02441 Flavoprotein LT978_11335 PF01192 RNA polymerase Rpb6 LT978_11340 PF00625 Guanylate kinase LT978_11345 PF04025 Domain of unknown function (DUF370) LT978_11350 PF08340 Domain of unknown function (DUF1732) LT978_11350 PF03755 YicC-like family, N-terminal region LT978_11355 PF00689 Cation transporting ATPase, C-terminus LT978_11355 PF00690 Cation transporter/ATPase, N-terminus LT978_11360 PF05670 NFACT protein RNA binding domain LT978_11370 PF01903 CbiX LT978_11375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LT978_11385 PF01747 ATP-sulfurylase LT978_11385 PF14306 PUA-like domain LT978_11390 PF01384 Phosphate transporter family LT978_11395 PF01507 Phosphoadenosine phosphosulfate reductase family LT978_11400 PF00156 Phosphoribosyl transferase domain LT978_11405 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LT978_11410 PF01180 Dihydroorotate dehydrogenase LT978_11415 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LT978_11415 PF00175 Oxidoreductase NAD-binding domain LT978_11420 PF02142 MGS-like domain LT978_11420 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LT978_11420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LT978_11425 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LT978_11425 PF00117 Glutamine amidotransferase class-I LT978_11430 PF01979 Amidohydrolase family LT978_11435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LT978_11435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LT978_11440 PF00860 Permease family LT978_11445 PF00156 Phosphoribosyl transferase domain LT978_11450 PF00849 RNA pseudouridylate synthase LT978_11450 PF01479 S4 domain LT978_11455 PF01252 Signal peptidase (SPase) II LT978_11460 PF01258 Prokaryotic dksA/traR C4-type zinc finger LT978_11465 PF08264 Anticodon-binding domain of tRNA LT978_11465 PF00133 tRNA synthetases class I (I, L, M and V) LT978_11470 PF05103 DivIVA protein LT978_11475 PF01479 S4 domain LT978_11475 PF17774 Putative RNA-binding domain in YlmH LT978_11480 PF02325 YGGT family LT978_11485 PF04472 Cell division protein SepF LT978_11490 PF01168 Alanine racemase, N-terminal domain LT978_11495 PF02578 Multi-copper polyphenol oxidoreductase laccase LT978_11500 PF05239 PRC-barrel domain LT978_11505 PF07687 Peptidase dimerisation domain LT978_11505 PF01546 Peptidase family M20/M25/M40 LT978_11510 PF00005 ABC transporter LT978_11515 PF04545 Sigma-70, region 4 LT978_11515 PF04542 Sigma-70 region 2 LT978_11515 PF04539 Sigma-70 region 3 LT978_11520 PF04542 Sigma-70 region 2 LT978_11520 PF04545 Sigma-70, region 4 LT978_11525 PF03419 Sporulation factor SpoIIGA LT978_11530 PF05922 Peptidase inhibitor I9 LT978_11530 PF00082 Subtilase family LT978_11535 PF12327 FtsZ family, C-terminal domain LT978_11535 PF00091 Tubulin/FtsZ family, GTPase domain LT978_11540 PF02491 SHS2 domain inserted in FTSA LT978_11545 PF08478 POTRA domain, FtsQ-type LT978_11550 PF01565 FAD binding domain LT978_11550 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LT978_11555 PF04101 Glycosyltransferase family 28 C-terminal domain LT978_11555 PF03033 Glycosyltransferase family 28 N-terminal domain LT978_11560 PF01098 Cell cycle protein LT978_11565 PF02875 Mur ligase family, glutamate ligase domain LT978_11565 PF08245 Mur ligase middle domain LT978_11570 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LT978_11570 PF00953 Glycosyl transferase family 4 LT978_11575 PF08245 Mur ligase middle domain LT978_11575 PF01225 Mur ligase family, catalytic domain LT978_11575 PF02875 Mur ligase family, glutamate ligase domain LT978_11580 PF03717 Penicillin-binding Protein dimerisation domain LT978_11580 PF03793 PASTA domain LT978_11580 PF00905 Penicillin binding protein transpeptidase domain LT978_11585 PF03793 PASTA domain LT978_11585 PF03717 Penicillin-binding Protein dimerisation domain LT978_11585 PF00905 Penicillin binding protein transpeptidase domain LT978_11595 PF01795 MraW methylase family LT978_11600 PF02381 MraZ protein, putative antitoxin-like LT978_11605 PF10079 Bacillithiol biosynthesis BshC LT978_11610 PF02558 Ketopantoate reductase PanE/ApbA LT978_11610 PF08546 Ketopantoate reductase PanE/ApbA C terminal LT978_11615 PF00583 Acetyltransferase (GNAT) family LT978_11625 PF01783 Ribosomal L32p protein family LT978_11630 PF02620 Large ribosomal RNA subunit accumulation protein YceD LT978_11635 PF05636 HIGH Nucleotidyl Transferase LT978_11640 PF13180 PDZ domain LT978_11640 PF05362 Lon protease (S16) C-terminal proteolytic domain LT978_11645 PF01734 Patatin-like phospholipase LT978_11650 PF07670 Nucleoside recognition LT978_11655 PF01467 Cytidylyltransferase-like LT978_11670 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LT978_11675 PF06133 Control of competence regulator ComK, YlbF/YmcA LT978_11680 PF14003 YlbE-like protein LT978_11685 PF14071 Putative coat protein LT978_11690 PF00188 Cysteine-rich secretory protein family LT978_11690 PF14504 CAP-associated N-terminal LT978_11695 PF00571 CBS domain LT978_11700 PF08868 YugN-like family LT978_11705 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LT978_11710 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LT978_11715 PF00510 Cytochrome c oxidase subunit III LT978_11720 PF00115 Cytochrome C and Quinol oxidase polypeptide I LT978_11725 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LT978_11725 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LT978_11725 PF00034 Cytochrome c LT978_11730 PF01040 UbiA prenyltransferase family LT978_11735 PF02628 Cytochrome oxidase assembly protein LT978_11740 PF00289 Biotin carboxylase, N-terminal domain LT978_11740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LT978_11740 PF02785 Biotin carboxylase C-terminal domain LT978_11740 PF00364 Biotin-requiring enzyme LT978_11740 PF00682 HMGL-like LT978_11740 PF02436 Conserved carboxylase domain LT978_11745 PF01098 Cell cycle protein LT978_11750 PF07408 Protein of unknown function (DUF1507) LT978_11755 PF04960 Glutaminase LT978_11765 PF02562 PhoH-like protein LT978_11765 PF13638 PIN domain LT978_11770 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LT978_11775 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) LT978_11780 PF14036 YlaH-like protein LT978_11785 PF03144 Elongation factor Tu domain 2 LT978_11785 PF00009 Elongation factor Tu GTP binding domain LT978_11785 PF00679 Elongation factor G C-terminus LT978_11785 PF14492 Elongation Factor G, domain II LT978_11790 PF17259 Family of unknown function (DUF5325) LT978_11800 PF13490 Putative zinc-finger LT978_11805 PF04542 Sigma-70 region 2 LT978_11805 PF08281 Sigma-70, region 4 LT978_11810 PF03413 Peptidase propeptide and YPEB domain LT978_11810 PF07504 Fungalysin/Thermolysin Propeptide Motif LT978_11810 PF02868 Thermolysin metallopeptidase, alpha-helical domain LT978_11810 PF01447 Thermolysin metallopeptidase, catalytic domain LT978_11815 PF00583 Acetyltransferase (GNAT) family LT978_11820 PF00459 Inositol monophosphatase family LT978_11830 PF06335 Protein of unknown function (DUF1054) LT978_11835 PF05256 Uncharacterised protein family (UPF0223) LT978_11840 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LT978_11840 PF01276 Orn/Lys/Arg decarboxylase, major domain LT978_11845 PF13790 SR1 protein LT978_11860 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT978_11860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LT978_11865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LT978_11865 PF00364 Biotin-requiring enzyme LT978_11865 PF02817 e3 binding domain LT978_11870 PF02779 Transketolase, pyrimidine binding domain LT978_11870 PF02780 Transketolase, C-terminal domain LT978_11875 PF00676 Dehydrogenase E1 component LT978_11880 PF00144 Beta-lactamase LT978_11880 PF11954 Domain of unknown function (DUF3471) LT978_11885 PF14765 Polyketide synthase dehydratase LT978_11885 PF00550 Phosphopantetheine attachment site LT978_11885 PF08659 KR domain LT978_11885 PF13193 AMP-binding enzyme C-terminal domain LT978_11885 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_11885 PF16197 Ketoacyl-synthetase C-terminal extension LT978_11885 PF00668 Condensation domain LT978_11885 PF00501 AMP-binding enzyme LT978_11885 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_11890 PF16197 Ketoacyl-synthetase C-terminal extension LT978_11890 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_11890 PF08659 KR domain LT978_11890 PF00550 Phosphopantetheine attachment site LT978_11890 PF14765 Polyketide synthase dehydratase LT978_11890 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_11895 PF16197 Ketoacyl-synthetase C-terminal extension LT978_11895 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_11895 PF08659 KR domain LT978_11895 PF00550 Phosphopantetheine attachment site LT978_11895 PF14765 Polyketide synthase dehydratase LT978_11895 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_11900 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_11900 PF08659 KR domain LT978_11900 PF00550 Phosphopantetheine attachment site LT978_11900 PF14765 Polyketide synthase dehydratase LT978_11900 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_11900 PF16197 Ketoacyl-synthetase C-terminal extension LT978_11905 PF14765 Polyketide synthase dehydratase LT978_11905 PF08659 KR domain LT978_11905 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_11905 PF00501 AMP-binding enzyme LT978_11905 PF13193 AMP-binding enzyme C-terminal domain LT978_11905 PF00668 Condensation domain LT978_11905 PF00550 Phosphopantetheine attachment site LT978_11905 PF16197 Ketoacyl-synthetase C-terminal extension LT978_11905 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_11910 PF16197 Ketoacyl-synthetase C-terminal extension LT978_11910 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_11910 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_11910 PF08659 KR domain LT978_11910 PF00550 Phosphopantetheine attachment site LT978_11910 PF14765 Polyketide synthase dehydratase LT978_11915 PF14765 Polyketide synthase dehydratase LT978_11915 PF00501 AMP-binding enzyme LT978_11915 PF13193 AMP-binding enzyme C-terminal domain LT978_11915 PF00668 Condensation domain LT978_11915 PF16197 Ketoacyl-synthetase C-terminal extension LT978_11915 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_11915 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_11915 PF08659 KR domain LT978_11915 PF00550 Phosphopantetheine attachment site LT978_11920 PF00698 Acyl transferase domain LT978_11925 PF10368 Putative cell-wall binding lipoprotein LT978_11935 PF01327 Polypeptide deformylase LT978_11945 PF07288 Protein of unknown function (DUF1447) LT978_11950 PF00753 Metallo-beta-lactamase superfamily LT978_11950 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LT978_11950 PF17770 Ribonuclease J C-terminal domain LT978_11955 PF13382 Adenine deaminase C-terminal domain LT978_11955 PF01979 Amidohydrolase family LT978_11960 PF02080 TrkA-C domain LT978_11960 PF02254 TrkA-N domain LT978_11965 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LT978_11970 PF00989 PAS fold LT978_11970 PF00512 His Kinase A (phospho-acceptor) domain LT978_11970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_11975 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LT978_11975 PF18277 AbrB C-terminal domain LT978_11985 PF17447 Uncharacterized YkpC-like LT978_11990 PF02073 Thermophilic metalloprotease (M29) LT978_11995 PF08546 Ketopantoate reductase PanE/ApbA C terminal LT978_11995 PF02558 Ketopantoate reductase PanE/ApbA LT978_12000 PF00005 ABC transporter LT978_12000 PF12848 ABC transporter LT978_12010 PF10502 Signal peptidase, peptidase S26 LT978_12015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LT978_12015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LT978_12020 PF00294 pfkB family carbohydrate kinase LT978_12025 PF00455 DeoR C terminal sensor domain LT978_12025 PF08220 DeoR-like helix-turn-helix domain LT978_12030 PF12704 MacB-like periplasmic core domain LT978_12030 PF02687 FtsX-like permease family LT978_12035 PF00005 ABC transporter LT978_12040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LT978_12045 PF04893 Yip1 domain LT978_12050 PF02597 ThiS family LT978_12055 PF02391 MoaE protein LT978_12060 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LT978_12065 PF00994 Probable molybdopterin binding domain LT978_12065 PF03453 MoeA N-terminal region (domain I and II) LT978_12065 PF03454 MoeA C-terminal region (domain IV) LT978_12070 PF00899 ThiF family LT978_12075 PF12804 MobA-like NTP transferase domain LT978_12090 PF00578 AhpC/TSA family LT978_12095 PF00924 Mechanosensitive ion channel LT978_12100 PF03698 Uncharacterised protein family (UPF0180) LT978_12105 PF07687 Peptidase dimerisation domain LT978_12105 PF01546 Peptidase family M20/M25/M40 LT978_12110 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LT978_12110 PF00132 Bacterial transferase hexapeptide (six repeats) LT978_12110 PF14602 Hexapeptide repeat of succinyl-transferase LT978_12115 PF00258 Flavodoxin LT978_12125 PF00258 Flavodoxin LT978_12130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_12130 PF03466 LysR substrate binding domain LT978_12140 PF14156 Antirepressor AbbA LT978_12145 PF04308 Ribonuclease H-like LT978_12150 PF08796 Protein of unknown function (DUF1797) LT978_12155 PF00563 EAL domain LT978_12155 PF10388 EAL-domain associated signalling protein domain LT978_12170 PF00149 Calcineurin-like phosphoesterase LT978_12170 PF10518 TAT (twin-arginine translocation) pathway signal sequence LT978_12175 PF01476 LysM domain LT978_12175 PF03734 L,D-transpeptidase catalytic domain LT978_12180 PF07690 Major Facilitator Superfamily LT978_12185 PF14177 YkyB-like protein LT978_12190 PF01584 CheW-like domain LT978_12190 PF00072 Response regulator receiver domain LT978_12200 PF00155 Aminotransferase class I and II LT978_12205 PF08447 PAS fold LT978_12205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_12205 PF00512 His Kinase A (phospho-acceptor) domain LT978_12205 PF00989 PAS fold LT978_12210 PF00905 Penicillin binding protein transpeptidase domain LT978_12210 PF03717 Penicillin-binding Protein dimerisation domain LT978_12215 PF00188 Cysteine-rich secretory protein family LT978_12230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LT978_12230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LT978_12235 PF02743 Cache domain LT978_12235 PF00672 HAMP domain LT978_12235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LT978_12245 PF11132 Transcriptional regulator protein (SplA) LT978_12250 PF05524 PEP-utilising enzyme, N-terminal LT978_12250 PF00391 PEP-utilising enzyme, mobile domain LT978_12250 PF02896 PEP-utilising enzyme, TIM barrel domain LT978_12255 PF00381 PTS HPr component phosphorylation site LT978_12260 PF02378 Phosphotransferase system, EIIC LT978_12260 PF00367 phosphotransferase system, EIIB LT978_12260 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LT978_12265 PF00874 PRD domain LT978_12265 PF03123 CAT RNA binding domain LT978_12270 PF00356 Bacterial regulatory proteins, lacI family LT978_12270 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LT978_12275 PF01321 Creatinase/Prolidase N-terminal domain LT978_12275 PF00557 Metallopeptidase family M24 LT978_12285 PF00578 AhpC/TSA family LT978_12290 PF01943 Polysaccharide biosynthesis protein LT978_12295 PF07486 Cell Wall Hydrolase LT978_12305 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) LT978_12310 PF11514 Protein of unknown function (DUF3219) LT978_12315 PF14489 QueF-like protein LT978_12320 PF04055 Radical SAM superfamily LT978_12325 PF01242 6-pyruvoyl tetrahydropterin synthase LT978_12330 PF06508 Queuosine biosynthesis protein QueC LT978_12345 PF00004 ATPase family associated with various cellular activities (AAA) LT978_12345 PF17871 AAA lid domain LT978_12345 PF10431 C-terminal, D2-small domain, of ClpB protein LT978_12345 PF07724 AAA domain (Cdc48 subfamily) LT978_12350 PF01618 MotA/TolQ/ExbB proton channel family LT978_12355 PF00691 OmpA family LT978_12355 PF13677 Membrane MotB of proton-channel complex MotA/MotB LT978_12360 PF01047 MarR family LT978_12365 PF00512 His Kinase A (phospho-acceptor) domain LT978_12365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_12365 PF02743 Cache domain LT978_12370 PF09388 Spo0E like sporulation regulatory protein LT978_12375 PF03079 ARD/ARD' family LT978_12380 PF00596 Class II Aldolase and Adducin N-terminal domain LT978_12390 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LT978_12390 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LT978_12395 PF00155 Aminotransferase class I and II LT978_12400 PF00795 Carbon-nitrogen hydrolase LT978_12405 PF01636 Phosphotransferase enzyme family LT978_12410 PF01008 Initiation factor 2 subunit family LT978_12420 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LT978_12420 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LT978_12425 PF00989 PAS fold LT978_12425 PF13426 PAS domain LT978_12425 PF13188 PAS domain LT978_12425 PF00512 His Kinase A (phospho-acceptor) domain LT978_12425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_12430 PF01757 Acyltransferase family LT978_12440 PF04239 Protein of unknown function (DUF421) LT978_12445 PF02386 Cation transport protein LT978_12450 PF01435 Peptidase family M48 LT978_12455 PF08876 Domain of unknown function (DUF1836) LT978_12460 PF00269 Small, acid-soluble spore proteins, alpha/beta type LT978_12465 PF12791 Anti-sigma factor N-terminus LT978_12470 PF04542 Sigma-70 region 2 LT978_12480 PF09335 SNARE associated Golgi protein LT978_12485 PF02735 Ku70/Ku80 beta-barrel domain LT978_12490 PF01068 ATP dependent DNA ligase domain LT978_12500 PF01047 MarR family LT978_12515 PF13411 MerR HTH family regulatory protein LT978_12520 PF03448 MgtE intracellular N domain LT978_12520 PF01769 Divalent cation transporter LT978_12520 PF00571 CBS domain LT978_12525 PF11132 Transcriptional regulator protein (SplA) LT978_12530 PF01476 LysM domain LT978_12530 PF00704 Glycosyl hydrolases family 18 LT978_12535 PF09819 ABC-type cobalt transport system, permease component LT978_12540 PF00005 ABC transporter LT978_12545 PF02361 Cobalt transport protein LT978_12550 PF01740 STAS domain LT978_12555 PF00082 Subtilase family LT978_12560 PF01717 Cobalamin-independent synthase, Catalytic domain LT978_12560 PF08267 Cobalamin-independent synthase, N-terminal domain LT978_12565 PF00027 Cyclic nucleotide-binding domain LT978_12570 PF12832 MFS_1 like family LT978_12580 PF13181 Tetratricopeptide repeat LT978_12580 PF00535 Glycosyl transferase family 2 LT978_12595 PF02566 OsmC-like protein LT978_12600 PF01047 MarR family LT978_12605 PF02566 OsmC-like protein LT978_12610 PF00171 Aldehyde dehydrogenase family LT978_12615 PF00696 Amino acid kinase family LT978_12615 PF01472 PUA domain LT978_12620 PF00551 Formyl transferase LT978_12620 PF01842 ACT domain LT978_12625 PF00893 Small Multidrug Resistance protein LT978_12630 PF00893 Small Multidrug Resistance protein LT978_12635 PF13302 Acetyltransferase (GNAT) domain LT978_12640 PF03061 Thioesterase superfamily LT978_12650 PF10282 Lactonase, 7-bladed beta-propeller LT978_12655 PF00005 ABC transporter LT978_12655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LT978_12660 PF00877 NlpC/P60 family LT978_12665 PF13378 Enolase C-terminal domain-like LT978_12665 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LT978_12670 PF17676 LD-carboxypeptidase C-terminal domain LT978_12670 PF02016 LD-carboxypeptidase N-terminal domain LT978_12675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LT978_12680 PF00005 ABC transporter LT978_12680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LT978_12685 PF00528 Binding-protein-dependent transport system inner membrane component LT978_12685 PF12911 N-terminal TM domain of oligopeptide transport permease C LT978_12690 PF00528 Binding-protein-dependent transport system inner membrane component LT978_12695 PF04951 D-aminopeptidase LT978_12700 PF07690 Major Facilitator Superfamily LT978_12705 PF13180 PDZ domain LT978_12715 PF00535 Glycosyl transferase family 2 LT978_12720 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LT978_12725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LT978_12730 PF13520 Amino acid permease LT978_12735 PF01865 Protein of unknown function DUF47 LT978_12740 PF01384 Phosphate transporter family LT978_12745 PF14171 Toxin SpoIISA, type II toxin-antitoxin system LT978_12750 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system LT978_12760 PF01510 N-acetylmuramoyl-L-alanine amidase LT978_12760 PF01476 LysM domain LT978_12760 PF01471 Putative peptidoglycan binding domain LT978_12765 PF04688 SPP1 phage holin LT978_12770 PF10779 Haemolysin XhlA LT978_12780 PF09693 Phage uncharacterised protein (Phage_XkdX) LT978_12800 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) LT978_12805 PF04865 Baseplate J-like protein LT978_12810 PF10934 Protein of unknown function (DUF2634) LT978_12815 PF10844 Protein of unknown function (DUF2577) LT978_12825 PF01476 LysM domain LT978_12830 PF01464 Transglycosylase SLT domain LT978_12830 PF01464 Transglycosylase SLT domain LT978_12830 PF01464 Transglycosylase SLT domain LT978_12840 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC LT978_12845 PF09393 Phage tail tube protein LT978_12850 PF04984 Phage tail sheath protein subtilisin-like domain LT978_12850 PF17482 Phage tail sheath C-terminal domain LT978_12850 PF17481 Phage tail sheath protein beta-sandwich domain LT978_12865 PF04883 Bacteriophage HK97-gp10, putative tail-component LT978_12870 PF12206 Domain of unknown function (DUF3599) LT978_12875 PF11436 Protein of unknown function (DUF3199) LT978_12880 PF05065 Phage capsid family LT978_12885 PF14550 Putative phage serine protease XkdF LT978_12890 PF04860 Phage portal protein LT978_12895 PF04466 Phage terminase large subunit LT978_12895 PF17288 Terminase RNAseH like domain LT978_12900 PF03592 Terminase small subunit LT978_12900 PF10668 Phage terminase small subunit LT978_12905 PF08281 Sigma-70, region 4 LT978_12910 PF17356 Phage-like element PBSX protein XtrA LT978_12925 PF01695 IstB-like ATP binding protein LT978_12940 PF01381 Helix-turn-helix LT978_12945 PF06114 IrrE N-terminal-like domain LT978_12955 PF05908 Poly-gamma-glutamate hydrolase LT978_12960 PF08000 Bacterial PH domain LT978_12965 PF01471 Putative peptidoglycan binding domain LT978_12965 PF01510 N-acetylmuramoyl-L-alanine amidase LT978_12965 PF01476 LysM domain LT978_12975 PF18801 response regulator aspartate phosphatase H, N terminal LT978_12980 PF05163 DinB family LT978_12985 PF01925 Sulfite exporter TauE/SafE LT978_12990 PF13575 Domain of unknown function (DUF4135) LT978_12990 PF05147 Lanthionine synthetase C-like protein LT978_13005 PF03412 Peptidase C39 family LT978_13005 PF00005 ABC transporter LT978_13005 PF00664 ABC transporter transmembrane region LT978_13020 PF00072 Response regulator receiver domain LT978_13020 PF00196 Bacterial regulatory proteins, luxR family LT978_13025 PF07730 Histidine kinase LT978_13025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_13040 PF00005 ABC transporter LT978_13045 PF00672 HAMP domain LT978_13045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_13045 PF00512 His Kinase A (phospho-acceptor) domain LT978_13050 PF00072 Response regulator receiver domain LT978_13050 PF00486 Transcriptional regulatory protein, C terminal LT978_13055 PF08666 SAF domain LT978_13055 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LT978_13065 PF00356 Bacterial regulatory proteins, lacI family LT978_13075 PF02614 Glucuronate isomerase LT978_13080 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT978_13085 PF07849 Protein of unknown function (DUF1641) LT978_13095 PF13536 Putative multidrug resistance efflux transporter LT978_13100 PF00005 ABC transporter LT978_13105 PF03649 Uncharacterised protein family (UPF0014) LT978_13110 PF02602 Uroporphyrinogen-III synthase HemD LT978_13120 PF04101 Glycosyltransferase family 28 C-terminal domain LT978_13125 PF00067 Cytochrome P450 LT978_13130 PF07849 Protein of unknown function (DUF1641) LT978_13135 PF12838 4Fe-4S dicluster domain LT978_13135 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LT978_13135 PF00384 Molybdopterin oxidoreductase LT978_13135 PF01568 Molydopterin dinucleotide binding domain LT978_13135 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LT978_13140 PF14172 Domain of unknown function (DUF4309) LT978_13145 PF10990 Protein of unknown function (DUF2809) LT978_13150 PF14070 Putative motility protein LT978_13155 PF02308 MgtC family LT978_13170 PF00455 DeoR C terminal sensor domain LT978_13170 PF08220 DeoR-like helix-turn-helix domain LT978_13175 PF00232 Glycosyl hydrolase family 1 LT978_13180 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LT978_13185 PF02378 Phosphotransferase system, EIIC LT978_13185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LT978_13190 PF10509 Galactokinase galactose-binding signature LT978_13190 PF00288 GHMP kinases N terminal domain LT978_13190 PF08544 GHMP kinases C terminal LT978_13195 PF16363 GDP-mannose 4,6 dehydratase LT978_13200 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LT978_13200 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LT978_13205 PF07745 Glycosyl hydrolase family 53 LT978_13210 PF01047 MarR family LT978_13215 PF07690 Major Facilitator Superfamily LT978_13220 PF03992 Antibiotic biosynthesis monooxygenase LT978_13230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LT978_13280 PF01810 LysE type translocator LT978_13325 PF01053 Cys/Met metabolism PLP-dependent enzyme LT978_13330 PF01053 Cys/Met metabolism PLP-dependent enzyme LT978_13335 PF00756 Putative esterase LT978_13345 PF13673 Acetyltransferase (GNAT) domain LT978_13355 PF00005 ABC transporter LT978_13365 PF00753 Metallo-beta-lactamase superfamily LT978_13375 PF00580 UvrD/REP helicase N-terminal domain LT978_13375 PF13361 UvrD-like helicase C-terminal domain LT978_13380 PF14069 Stage VI sporulation protein F LT978_13395 PF07098 Protein of unknown function (DUF1360) LT978_13400 PF07552 Spore Coat Protein X and V domain LT978_13410 PF07552 Spore Coat Protein X and V domain LT978_13415 PF10612 Spore coat protein Z LT978_13420 PF10612 Spore coat protein Z LT978_13425 PF14153 Spore coat protein CotO LT978_13435 PF08543 Phosphomethylpyrimidine kinase LT978_13440 PF00899 ThiF family LT978_13445 PF05690 Thiazole biosynthesis protein ThiG LT978_13450 PF02597 ThiS family LT978_13455 PF01266 FAD dependent oxidoreductase LT978_13460 PF02581 Thiamine monophosphate synthase LT978_13465 PF03070 TENA/THI-4/PQQC family LT978_13470 PF00999 Sodium/hydrogen exchanger family LT978_13470 PF02080 TrkA-C domain LT978_13470 PF02254 TrkA-N domain LT978_13475 PF00149 Calcineurin-like phosphoesterase LT978_13480 PF00849 RNA pseudouridylate synthase LT978_13485 PF01513 ATP-NAD kinase LT978_13490 PF04607 Region found in RelA / SpoT proteins LT978_13500 PF01928 CYTH domain LT978_13505 PF01464 Transglycosylase SLT domain LT978_13510 PF01152 Bacterial-like globin LT978_13525 PF01432 Peptidase family M3 LT978_13525 PF08439 Oligopeptidase F LT978_13530 PF06054 Competence protein CoiA-like family LT978_13535 PF05389 Negative regulator of genetic competence (MecA) LT978_13545 PF03741 Integral membrane protein TerC family LT978_13550 PF03960 ArsC family LT978_13555 PF13508 Acetyltransferase (GNAT) domain LT978_13565 PF00005 ABC transporter LT978_13565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LT978_13570 PF00005 ABC transporter LT978_13570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LT978_13575 PF00528 Binding-protein-dependent transport system inner membrane component LT978_13575 PF12911 N-terminal TM domain of oligopeptide transport permease C LT978_13580 PF00528 Binding-protein-dependent transport system inner membrane component LT978_13585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LT978_13590 PF00579 tRNA synthetases class I (W and Y) LT978_13595 PF12227 Protein of unknown function (DUF3603) LT978_13600 PF00528 Binding-protein-dependent transport system inner membrane component LT978_13600 PF12911 N-terminal TM domain of oligopeptide transport permease C LT978_13605 PF00528 Binding-protein-dependent transport system inner membrane component LT978_13610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LT978_13615 PF00005 ABC transporter LT978_13615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LT978_13620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LT978_13620 PF00005 ABC transporter LT978_13625 PF10026 Predicted Zn-dependent protease (DUF2268) LT978_13630 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_13630 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_13635 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LT978_13635 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LT978_13645 PF10815 ComZ LT978_13650 PF02608 ABC transporter substrate-binding protein PnrA-like LT978_13665 PF11151 Protein of unknown function (DUF2929) LT978_13670 PF14168 YjzC-like protein LT978_13675 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LT978_13675 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LT978_13680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LT978_13680 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LT978_13685 PF00117 Glutamine amidotransferase class-I LT978_13685 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LT978_13690 PF00202 Aminotransferase class-III LT978_13695 PF00696 Amino acid kinase family LT978_13700 PF01960 ArgJ family LT978_13705 PF02774 Semialdehyde dehydrogenase, dimerisation domain LT978_13705 PF01118 Semialdehyde dehydrogenase, NAD binding domain LT978_13710 PF07690 Major Facilitator Superfamily LT978_13715 PF01565 FAD binding domain LT978_13720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LT978_13725 PF01883 Iron-sulfur cluster assembly protein LT978_13730 PF00326 Prolyl oligopeptidase family LT978_13745 PF12758 Protein of unknown function (DUF3813) LT978_13750 PF12690 Intracellular proteinase inhibitor LT978_13755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LT978_13755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LT978_13760 PF02645 Uncharacterised protein, DegV family COG1307 LT978_13770 PF00672 HAMP domain LT978_13770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LT978_13770 PF12729 Four helix bundle sensory module for signal transduction LT978_13775 PF02608 ABC transporter substrate-binding protein PnrA-like LT978_13780 PF13509 S1 domain LT978_13780 PF17783 CvfB-like winged helix domain LT978_13785 PF04461 Protein of unknown function (DUF520) LT978_13790 PF02219 Methylenetetrahydrofolate reductase LT978_13790 PF02574 Homocysteine S-methyltransferase LT978_13795 PF13673 Acetyltransferase (GNAT) domain LT978_13800 PF13599 Pentapeptide repeats (9 copies) LT978_13805 PF05163 DinB family LT978_13810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LT978_13810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LT978_13815 PF00356 Bacterial regulatory proteins, lacI family LT978_13820 PF12833 Helix-turn-helix domain LT978_13820 PF02311 AraC-like ligand binding domain LT978_13825 PF01554 MatE LT978_13835 PF00733 Asparagine synthase LT978_13835 PF13537 Glutamine amidotransferase domain LT978_13840 PF10949 Protein of unknown function (DUF2777) LT978_13845 PF07457 Protein of unknown function (DUF1516) LT978_13850 PF01557 Fumarylacetoacetate (FAA) hydrolase family LT978_13855 PF09388 Spo0E like sporulation regulatory protein LT978_13860 PF10676 Spore germination protein gerPA/gerPF LT978_13865 PF10803 Spore germination GerPB LT978_13870 PF10737 Spore germination protein GerPC LT978_13880 PF10970 Spore germination protein GerPE LT978_13885 PF10676 Spore germination protein gerPA/gerPF LT978_13895 PF13476 AAA domain LT978_13900 PF12320 Type 5 capsule protein repressor C-terminal domain LT978_13900 PF00149 Calcineurin-like phosphoesterase LT978_13905 PF00580 UvrD/REP helicase N-terminal domain LT978_13905 PF12705 PD-(D/E)XK nuclease superfamily LT978_13905 PF13361 UvrD-like helicase C-terminal domain LT978_13910 PF12705 PD-(D/E)XK nuclease superfamily LT978_13910 PF13361 UvrD-like helicase C-terminal domain LT978_13915 PF04239 Protein of unknown function (DUF421) LT978_13920 PF02915 Rubrerythrin LT978_13925 PF08361 MAATS-type transcriptional repressor, C-terminal region LT978_13925 PF00440 Bacterial regulatory proteins, tetR family LT978_13930 PF07690 Major Facilitator Superfamily LT978_13935 PF05145 Transition state regulatory protein AbrB LT978_13940 PF01047 MarR family LT978_13945 PF01494 FAD binding domain LT978_13950 PF10502 Signal peptidase, peptidase S26 LT978_13955 PF09335 SNARE associated Golgi protein LT978_13965 PF11755 Protein of unknown function (DUF3311) LT978_13970 PF00474 Sodium:solute symporter family LT978_13975 PF01906 Putative heavy-metal-binding LT978_13980 PF05901 Excalibur calcium-binding domain LT978_13985 PF15493 Domain of unknown function, YrpD LT978_13990 PF08818 Domain of unknown function (DU1801) LT978_14000 PF06338 ComK protein LT978_14005 PF08858 IDEAL domain LT978_14015 PF01266 FAD dependent oxidoreductase LT978_14015 PF00355 Rieske [2Fe-2S] domain LT978_14020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LT978_14025 PF02632 BioY family LT978_14030 PF13193 AMP-binding enzyme C-terminal domain LT978_14030 PF00501 AMP-binding enzyme LT978_14035 PF00108 Thiolase, N-terminal domain LT978_14035 PF02803 Thiolase, C-terminal domain LT978_14040 PF00300 Histidine phosphatase superfamily (branch 1) LT978_14045 PF01497 Periplasmic binding protein LT978_14050 PF05922 Peptidase inhibitor I9 LT978_14050 PF00082 Subtilase family LT978_14055 PF01435 Peptidase family M48 LT978_14055 PF16491 CAAX prenyl protease N-terminal, five membrane helices LT978_14065 PF13193 AMP-binding enzyme C-terminal domain LT978_14065 PF00501 AMP-binding enzyme LT978_14070 PF13460 NAD(P)H-binding LT978_14075 PF03099 Biotin/lipoate A/B protein ligase family LT978_14075 PF10437 Bacterial lipoate protein ligase C-terminus LT978_14080 PF12706 Beta-lactamase superfamily domain LT978_14085 PF14149 YhfH-like protein LT978_14090 PF00375 Sodium:dicarboxylate symporter family LT978_14095 PF05343 M42 glutamyl aminopeptidase LT978_14105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LT978_14105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LT978_14115 PF17932 Tetracyclin repressor-like, C-terminal domain LT978_14115 PF00440 Bacterial regulatory proteins, tetR family LT978_14120 PF01593 Flavin containing amine oxidoreductase LT978_14125 PF00762 Ferrochelatase LT978_14130 PF01208 Uroporphyrinogen decarboxylase (URO-D) LT978_14135 PF00912 Transglycosylase LT978_14135 PF00905 Penicillin binding protein transpeptidase domain LT978_14140 PF03992 Antibiotic biosynthesis monooxygenase LT978_14150 PF07687 Peptidase dimerisation domain LT978_14150 PF01546 Peptidase family M20/M25/M40 LT978_14155 PF12787 EcsC protein family LT978_14160 PF05975 Bacterial ABC transporter protein EcsB LT978_14165 PF00005 ABC transporter LT978_14170 PF01230 HIT domain LT978_14175 PF00266 Aminotransferase class-V LT978_14180 PF17099 Tryptophan transporter TrpP LT978_14190 PF12732 YtxH-like protein LT978_14195 PF01047 MarR family LT978_14200 PF08963 Protein of unknown function (DUF1878) LT978_14205 PF11667 Putative zincin peptidase LT978_14215 PF09680 Family of unknown function LT978_14220 PF09680 Family of unknown function LT978_14230 PF14147 Sporulation protein YhaL LT978_14235 PF01966 HD domain LT978_14240 PF13514 AAA domain LT978_14245 PF00149 Calcineurin-like phosphoesterase LT978_14255 PF00005 ABC transporter LT978_14255 PF13732 Domain of unknown function (DUF4162) LT978_14260 PF14120 YhzD-like protein LT978_14265 PF00378 Enoyl-CoA hydratase/isomerase LT978_14275 PF02080 TrkA-C domain LT978_14280 PF00999 Sodium/hydrogen exchanger family LT978_14285 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LT978_14290 PF04055 Radical SAM superfamily LT978_14300 PF08713 DNA alkylation repair enzyme LT978_14305 PF06133 Control of competence regulator ComK, YlbF/YmcA LT978_14310 PF04286 Protein of unknown function (DUF445) LT978_14315 PF14398 YheC/D like ATP-grasp LT978_14320 PF14398 YheC/D like ATP-grasp LT978_14325 PF17277 Family of unknown function (DUF5342) LT978_14330 PF00269 Small, acid-soluble spore proteins, alpha/beta type LT978_14340 PF13460 NAD(P)H-binding LT978_14345 PF00664 ABC transporter transmembrane region LT978_14345 PF00005 ABC transporter LT978_14350 PF00664 ABC transporter transmembrane region LT978_14350 PF00005 ABC transporter LT978_14355 PF00582 Universal stress protein family LT978_14365 PF13977 BetI-type transcriptional repressor, C-terminal LT978_14365 PF00440 Bacterial regulatory proteins, tetR family LT978_14370 PF01063 Amino-transferase class IV LT978_14375 PF01522 Polysaccharide deacetylase LT978_14380 PF02146 Sir2 family LT978_14385 PF00924 Mechanosensitive ion channel LT978_14390 PF17444 Uncharacterized YhdX-like LT978_14395 PF03009 Glycerophosphoryl diester phosphodiesterase family LT978_14400 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LT978_14405 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LT978_14410 PF01595 Cyclin M transmembrane N-terminal domain LT978_14410 PF00571 CBS domain LT978_14410 PF03471 Transporter associated domain LT978_14415 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_14415 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_14420 PF00155 Aminotransferase class I and II LT978_14425 PF13411 MerR HTH family regulatory protein LT978_14430 PF03471 Transporter associated domain LT978_14430 PF01595 Cyclin M transmembrane N-terminal domain LT978_14430 PF00571 CBS domain LT978_14435 PF01553 Acyltransferase LT978_14440 PF04542 Sigma-70 region 2 LT978_14440 PF08281 Sigma-70, region 4 LT978_14445 PF13791 Sigma factor regulator C-terminal LT978_14445 PF13800 Sigma factor regulator N-terminal LT978_14450 PF17453 Sigma-M inhibitor LT978_14455 PF00209 Sodium:neurotransmitter symporter family LT978_14460 PF13520 Amino acid permease LT978_14470 PF00285 Citrate synthase, C-terminal domain LT978_14475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_14475 PF03466 LysR substrate binding domain LT978_14480 PF00877 NlpC/P60 family LT978_14480 PF01476 LysM domain LT978_14485 PF00245 Alkaline phosphatase LT978_14490 PF04293 SpoVR like protein LT978_14500 PF02082 Transcriptional regulator LT978_14505 PF01476 LysM domain LT978_14505 PF00877 NlpC/P60 family LT978_14510 PF13028 Protein of unknown function (DUF3889) LT978_14515 PF14148 YhdB-like protein LT978_14520 PF03358 NADPH-dependent FMN reductase LT978_14525 PF00196 Bacterial regulatory proteins, luxR family LT978_14525 PF00072 Response regulator receiver domain LT978_14530 PF13185 GAF domain LT978_14530 PF07730 Histidine kinase LT978_14535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LT978_14535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LT978_14535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LT978_14535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LT978_14540 PF01266 FAD dependent oxidoreductase LT978_14540 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LT978_14545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LT978_14545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LT978_14550 PF00230 Major intrinsic protein LT978_14555 PF04309 Glycerol-3-phosphate responsive antiterminator LT978_14560 PF00202 Aminotransferase class-III LT978_14565 PF00795 Carbon-nitrogen hydrolase LT978_14565 PF00583 Acetyltransferase (GNAT) family LT978_14570 PF13419 Haloacid dehalogenase-like hydrolase LT978_14575 PF00571 CBS domain LT978_14580 PF17326 Family of unknown function (DUF5365) LT978_14585 PF00849 RNA pseudouridylate synthase LT978_14585 PF01479 S4 domain LT978_14590 PF04203 Sortase domain LT978_14595 PF00565 Staphylococcal nuclease homologue LT978_14595 PF00746 LPXTG cell wall anchor motif LT978_14595 PF02872 5'-nucleotidase, C-terminal domain LT978_14595 PF00149 Calcineurin-like phosphoesterase LT978_14600 PF07875 Coat F domain LT978_14610 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LT978_14620 PF00375 Sodium:dicarboxylate symporter family LT978_14625 PF07694 5TMR of 5TMR-LYT LT978_14625 PF00990 Diguanylate cyclase, GGDEF domain LT978_14630 PF03180 NLPA lipoprotein LT978_14635 PF00313 'Cold-shock' DNA-binding domain LT978_14640 PF12679 ABC-2 family transporter protein LT978_14645 PF00005 ABC transporter LT978_14650 PF00005 ABC transporter LT978_14655 PF00392 Bacterial regulatory proteins, gntR family LT978_14670 PF03358 NADPH-dependent FMN reductase LT978_14675 PF07690 Major Facilitator Superfamily LT978_14685 PF01047 MarR family LT978_14690 PF04285 Protein of unknown function (DUF444) LT978_14695 PF06798 PrkA serine protein kinase C-terminal domain LT978_14695 PF08298 PrkA AAA domain LT978_14705 PF04519 Polymer-forming cytoskeletal LT978_14710 PF13171 Protein of unknown function (DUF4004) LT978_14715 PF00588 SpoU rRNA Methylase family LT978_14720 PF12671 Putative amidase domain LT978_14725 PF08331 Domain of unknown function (DUF1730) LT978_14740 PF01381 Helix-turn-helix LT978_14750 PF00253 Ribosomal protein S14p/S29e LT978_14755 PF00296 Luciferase-like monooxygenase LT978_14760 PF00528 Binding-protein-dependent transport system inner membrane component LT978_14765 PF09084 NMT1/THI5 like LT978_14770 PF00005 ABC transporter LT978_14780 PF00199 Catalase LT978_14780 PF06628 Catalase-related immune-responsive LT978_14785 PF00005 ABC transporter LT978_14785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LT978_14790 PF00005 ABC transporter LT978_14790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LT978_14795 PF00528 Binding-protein-dependent transport system inner membrane component LT978_14795 PF12911 N-terminal TM domain of oligopeptide transport permease C LT978_14800 PF00528 Binding-protein-dependent transport system inner membrane component LT978_14805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LT978_14810 PF13040 Fur-regulated basic protein B LT978_14815 PF08031 Berberine and berberine like LT978_14815 PF01565 FAD binding domain LT978_14820 PF01964 Radical SAM ThiC family LT978_14820 PF13667 ThiC-associated domain LT978_14825 PF03575 Peptidase family S51 LT978_14930 PF18576 Helix-turn-helix domain LT978_14930 PF14540 Nucleotidyltransferase-like LT978_14935 PF11023 Zinc-ribbon containing domain LT978_14940 PF01475 Ferric uptake regulator family LT978_14945 PF00578 AhpC/TSA family LT978_14950 PF00202 Aminotransferase class-III LT978_14955 PF06081 Aromatic acid exporter family member 1 LT978_14960 PF00005 ABC transporter LT978_14960 PF00664 ABC transporter transmembrane region LT978_14965 PF04167 Protein of unknown function (DUF402) LT978_14970 PF14182 YgaB-like protein LT978_14975 PF04259 Small, acid-soluble spore protein, gamma-type LT978_14990 PF14815 NUDIX domain LT978_14990 PF00730 HhH-GPD superfamily base excision DNA repair protein LT978_14995 PF04307 LexA-binding, inner membrane-associated putative hydrolase LT978_15000 PF09586 Bacterial membrane protein YfhO LT978_15005 PF00535 Glycosyl transferase family 2 LT978_15010 PF00561 alpha/beta hydrolase fold LT978_15015 PF13630 SdpI/YhfL protein family LT978_15020 PF08239 Bacterial SH3 domain LT978_15025 PF14043 WVELL protein LT978_15030 PF08176 Small acid-soluble spore protein K family LT978_15035 PF00089 Trypsin LT978_15040 PF10794 Protein of unknown function (DUF2606) LT978_15045 PF07690 Major Facilitator Superfamily LT978_15050 PF08838 Protein of unknown function (DUF1811) LT978_15055 PF02631 RecX family LT978_15060 PF08338 Domain of unknown function (DUF1731) LT978_15060 PF01370 NAD dependent epimerase/dehydratase family LT978_15065 PF14152 YfhE-like protein LT978_15070 PF14151 YfhD-like protein LT978_15075 PF00881 Nitroreductase family LT978_15080 PF02567 Phenazine biosynthesis-like protein LT978_15085 PF09924 Uncharacterised conserved protein (DUF2156) LT978_15085 PF03706 Lysylphosphatidylglycerol synthase TM region LT978_15090 PF01047 MarR family LT978_15095 PF07690 Major Facilitator Superfamily LT978_15100 PF12867 DinB superfamily LT978_15105 PF01337 Barstar (barnase inhibitor) LT978_15110 PF00391 PEP-utilising enzyme, mobile domain LT978_15110 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LT978_15115 PF01757 Acyltransferase family LT978_15120 PF02525 Flavodoxin-like fold LT978_15125 PF03551 Transcriptional regulator PadR-like family LT978_15125 PF10400 Virulence activator alpha C-term LT978_15130 PF01040 UbiA prenyltransferase family LT978_15135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LT978_15140 PF07681 DoxX LT978_15145 PF00005 ABC transporter LT978_15145 PF00664 ABC transporter transmembrane region LT978_15150 PF00664 ABC transporter transmembrane region LT978_15150 PF00005 ABC transporter LT978_15155 PF00367 phosphotransferase system, EIIB LT978_15155 PF02378 Phosphotransferase system, EIIC LT978_15160 PF01418 Helix-turn-helix domain, rpiR family LT978_15160 PF01380 SIS domain LT978_15165 PF11975 Family 4 glycosyl hydrolase C-terminal domain LT978_15165 PF02056 Family 4 glycosyl hydrolase LT978_15170 PF08141 Small acid-soluble spore protein H family LT978_15175 PF00158 Sigma-54 interaction domain LT978_15175 PF02954 Bacterial regulatory protein, Fis family LT978_15175 PF01590 GAF domain LT978_15180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LT978_15180 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT978_15185 PF02817 e3 binding domain LT978_15185 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LT978_15185 PF00364 Biotin-requiring enzyme LT978_15190 PF02780 Transketolase, C-terminal domain LT978_15190 PF02779 Transketolase, pyrimidine binding domain LT978_15195 PF00676 Dehydrogenase E1 component LT978_15205 PF01207 Dihydrouridine synthase (Dus) LT978_15210 PF14118 YfzA-like protein LT978_15215 PF01938 TRAM domain LT978_15215 PF05958 tRNA (Uracil-5-)-methyltransferase LT978_15220 PF00730 HhH-GPD superfamily base excision DNA repair protein LT978_15225 PF01544 CorA-like Mg2+ transporter protein LT978_15235 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LT978_15235 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LT978_15240 PF01522 Polysaccharide deacetylase LT978_15250 PF08756 YfkB-like domain LT978_15250 PF04055 Radical SAM superfamily LT978_15255 PF00924 Mechanosensitive ion channel LT978_15260 PF14167 YfkD-like protein LT978_15265 PF01699 Sodium/calcium exchanger protein LT978_15270 PF07690 Major Facilitator Superfamily LT978_15275 PF03631 Virulence factor BrkB LT978_15285 PF01451 Low molecular weight phosphotyrosine protein phosphatase LT978_15290 PF06569 Protein of unknown function (DUF1128) LT978_15295 PF07690 Major Facilitator Superfamily LT978_15300 PF01487 Type I 3-dehydroquinase LT978_15305 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LT978_15305 PF08501 Shikimate dehydrogenase substrate binding domain LT978_15310 PF00356 Bacterial regulatory proteins, lacI family LT978_15315 PF01965 DJ-1/PfpI family LT978_15320 PF02872 5'-nucleotidase, C-terminal domain LT978_15320 PF00149 Calcineurin-like phosphoesterase LT978_15335 PF00881 Nitroreductase family LT978_15340 PF07702 UTRA domain LT978_15340 PF00392 Bacterial regulatory proteins, gntR family LT978_15345 PF16657 Maltogenic Amylase, C-terminal domain LT978_15345 PF00128 Alpha amylase, catalytic domain LT978_15350 PF00367 phosphotransferase system, EIIB LT978_15350 PF02378 Phosphotransferase system, EIIC LT978_15355 PF10676 Spore germination protein gerPA/gerPF LT978_15360 PF10676 Spore germination protein gerPA/gerPF LT978_15365 PF00011 Hsp20/alpha crystallin family LT978_15370 PF09350 Domain of unknown function (DUF1992) LT978_15375 PF00884 Sulfatase LT978_15380 PF10787 Uncharacterised protein from bacillus cereus group LT978_15385 PF02378 Phosphotransferase system, EIIC LT978_15385 PF00367 phosphotransferase system, EIIB LT978_15390 PF00557 Metallopeptidase family M24 LT978_15395 PF11588 Protein of unknown function (DUF3243) LT978_15405 PF11121 Protein of unknown function (DUF2639) LT978_15410 PF03473 MOSC domain LT978_15410 PF03475 3-alpha domain LT978_15415 PF00708 Acylphosphatase LT978_15420 PF02898 Nitric oxide synthase, oxygenase domain LT978_15425 PF00753 Metallo-beta-lactamase superfamily LT978_15430 PF03600 Citrate transporter LT978_15435 PF03401 Tripartite tricarboxylate transporter family receptor LT978_15440 PF12431 Transcriptional regulator LT978_15440 PF00072 Response regulator receiver domain LT978_15440 PF08279 HTH domain LT978_15445 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LT978_15445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_15475 PF00939 Sodium:sulfate symporter transmembrane region LT978_15480 PF00544 Pectate lyase LT978_15485 PF11181 Heat induced stress protein YflT LT978_15490 PF11486 Protein of unknown function (DUF3212) LT978_15495 PF16884 N-terminal domain of oxidoreductase LT978_15495 PF00107 Zinc-binding dehydrogenase LT978_15500 PF00583 Acetyltransferase (GNAT) family LT978_15505 PF00271 Helicase conserved C-terminal domain LT978_15505 PF00270 DEAD/DEAH box helicase LT978_15510 PF00005 ABC transporter LT978_15510 PF12848 ABC transporter LT978_15515 PF07690 Major Facilitator Superfamily LT978_15520 PF13411 MerR HTH family regulatory protein LT978_15525 PF00005 ABC transporter LT978_15525 PF16326 ABC transporter C-terminal domain LT978_15525 PF12848 ABC transporter LT978_15530 PF13181 Tetratricopeptide repeat LT978_15530 PF00535 Glycosyl transferase family 2 LT978_15540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LT978_15545 PF00171 Aldehyde dehydrogenase family LT978_15550 PF13520 Amino acid permease LT978_15555 PF07690 Major Facilitator Superfamily LT978_15560 PF03407 Nucleotide-diphospho-sugar transferase LT978_15565 PF00535 Glycosyl transferase family 2 LT978_15570 PF03407 Nucleotide-diphospho-sugar transferase LT978_15575 PF16363 GDP-mannose 4,6 dehydratase LT978_15580 PF00483 Nucleotidyl transferase LT978_15585 PF00884 Sulfatase LT978_15590 PF00067 Cytochrome P450 LT978_15590 PF00258 Flavodoxin LT978_15590 PF00667 FAD binding domain LT978_15590 PF00175 Oxidoreductase NAD-binding domain LT978_15595 PF13037 Domain of unknown function (DUF3898) LT978_15595 PF13039 Protein of unknown function (DUF3900) LT978_15600 PF01494 FAD binding domain LT978_15605 PF01047 MarR family LT978_15610 PF01027 Inhibitor of apoptosis-promoting Bax1 LT978_15615 PF01687 Riboflavin kinase LT978_15620 PF10055 Uncharacterized small protein (DUF2292) LT978_15625 PF01740 STAS domain LT978_15625 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain LT978_15630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LT978_15635 PF03992 Antibiotic biosynthesis monooxygenase LT978_15640 PF04239 Protein of unknown function (DUF421) LT978_15650 PF00583 Acetyltransferase (GNAT) family LT978_15655 PF05067 Manganese containing catalase LT978_15660 PF12652 CotJB protein LT978_15665 PF11007 Spore coat associated protein JA (CotJA) LT978_15670 PF04439 Streptomycin adenylyltransferase LT978_15680 PF01709 Transcriptional regulator LT978_15685 PF04740 LXG domain of WXG superfamily LT978_15690 PF04634 Protein of unknown function, DUF600 LT978_15695 PF04634 Protein of unknown function, DUF600 LT978_15705 PF04634 Protein of unknown function, DUF600 LT978_15715 PF04851 Type III restriction enzyme, res subunit LT978_15720 PF01555 DNA methylase LT978_15725 PF05958 tRNA (Uracil-5-)-methyltransferase LT978_15725 PF01938 TRAM domain LT978_15730 PF00781 Diacylglycerol kinase catalytic domain LT978_15735 PF00873 AcrB/AcrD/AcrF family LT978_15740 PF00440 Bacterial regulatory proteins, tetR family LT978_15745 PF02934 GatB/GatE catalytic domain LT978_15745 PF02637 GatB domain LT978_15750 PF01425 Amidase LT978_15755 PF02686 Glu-tRNAGln amidotransferase C subunit LT978_15760 PF00474 Sodium:solute symporter family LT978_15765 PF02308 MgtC family LT978_15770 PF01636 Phosphotransferase enzyme family LT978_15775 PF07537 CamS sex pheromone cAM373 precursor LT978_15780 PF01653 NAD-dependent DNA ligase adenylation domain LT978_15780 PF00533 BRCA1 C Terminus (BRCT) domain LT978_15780 PF03120 NAD-dependent DNA ligase OB-fold domain LT978_15780 PF12826 Helix-hairpin-helix motif LT978_15780 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LT978_15785 PF00580 UvrD/REP helicase N-terminal domain LT978_15785 PF13361 UvrD-like helicase C-terminal domain LT978_15790 PF01884 PcrB family LT978_15795 PF01645 Conserved region in glutamate synthase LT978_15800 PF01371 Trp repressor protein LT978_15805 PF11258 Protein of unknown function (DUF3048) N-terminal domain LT978_15805 PF17479 Protein of unknown function (DUF3048) C-terminal domain LT978_15810 PF13382 Adenine deaminase C-terminal domain LT978_15810 PF01979 Amidohydrolase family LT978_15815 PF11127 Protein of unknown function (DUF2892) LT978_15820 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LT978_15820 PF02843 Phosphoribosylglycinamide synthetase, C domain LT978_15820 PF02844 Phosphoribosylglycinamide synthetase, N domain LT978_15825 PF01808 AICARFT/IMPCHase bienzyme LT978_15825 PF02142 MGS-like domain LT978_15830 PF00551 Formyl transferase LT978_15835 PF00586 AIR synthase related protein, N-terminal domain LT978_15835 PF02769 AIR synthase related protein, C-terminal domain LT978_15840 PF00156 Phosphoribosyl transferase domain LT978_15845 PF00586 AIR synthase related protein, N-terminal domain LT978_15845 PF02769 AIR synthase related protein, C-terminal domain LT978_15845 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LT978_15855 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LT978_15860 PF01259 SAICAR synthetase LT978_15865 PF10397 Adenylosuccinate lyase C-terminus LT978_15865 PF00206 Lyase LT978_15870 PF02222 ATP-grasp domain LT978_15870 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LT978_15875 PF00731 AIR carboxylase LT978_15880 PF14044 NETI protein LT978_15885 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LT978_15890 PF13076 Fur-regulated basic protein A LT978_15900 PF00860 Permease family LT978_15910 PF04542 Sigma-70 region 2 LT978_15910 PF04545 Sigma-70, region 4 LT978_15915 PF00117 Glutamine amidotransferase class-I LT978_15915 PF00958 GMP synthase C terminal domain LT978_15915 PF02540 NAD synthase LT978_15920 PF13559 Domain of unknown function (DUF4129) LT978_15920 PF11992 Domain of unknown function (DUF3488) LT978_15920 PF01841 Transglutaminase-like superfamily LT978_15925 PF01882 Protein of unknown function DUF58 LT978_15930 PF07726 ATPase family associated with various cellular activities (AAA) LT978_15930 PF17863 AAA lid domain LT978_15935 PF00324 Amino acid permease LT978_15940 PF00394 Multicopper oxidase LT978_15940 PF07731 Multicopper oxidase LT978_15940 PF07732 Multicopper oxidase LT978_15945 PF14169 Cold-inducible protein YdjO LT978_15955 PF07676 WD40-like Beta Propeller Repeat LT978_15960 PF03330 Lytic transglycolase LT978_15965 PF00107 Zinc-binding dehydrogenase LT978_15965 PF08240 Alcohol dehydrogenase GroES-like domain LT978_15970 PF04542 Sigma-70 region 2 LT978_15970 PF08281 Sigma-70, region 4 LT978_15975 PF11738 Protein of unknown function (DUF3298) LT978_15975 PF13739 Deacetylase PdaC LT978_15980 PF01757 Acyltransferase family LT978_15985 PF13421 SPFH domain-Band 7 family LT978_15990 PF04536 TPM domain LT978_15995 PF08271 TFIIB zinc-binding LT978_16000 PF04012 PspA/IM30 family LT978_16005 PF14154 Domain of unknown function (DUF4306) LT978_16010 PF00294 pfkB family carbohydrate kinase LT978_16020 PF08240 Alcohol dehydrogenase GroES-like domain LT978_16020 PF00107 Zinc-binding dehydrogenase LT978_16025 PF00931 NB-ARC domain LT978_16025 PF13176 Tetratricopeptide repeat LT978_16040 PF08924 Domain of unknown function (DUF1906) LT978_16040 PF01471 Putative peptidoglycan binding domain LT978_16060 PF01471 Putative peptidoglycan binding domain LT978_16060 PF01476 LysM domain LT978_16060 PF01510 N-acetylmuramoyl-L-alanine amidase LT978_16065 PF05105 Bacteriophage holin family LT978_16115 PF00041 Fibronectin type III domain LT978_16115 PF00704 Glycosyl hydrolases family 18 LT978_16185 PF10668 Phage terminase small subunit LT978_16205 PF08281 Sigma-70, region 4 LT978_16240 PF09643 YopX protein LT978_16280 PF17356 Phage-like element PBSX protein XtrA LT978_16305 PF01695 IstB-like ATP binding protein LT978_16310 PF07261 Replication initiation and membrane attachment LT978_16330 PF09466 Hypothetical protein Yqai LT978_16335 PF17448 Uncharacterized YqaH-like LT978_16340 PF01381 Helix-turn-helix LT978_16360 PF01381 Helix-turn-helix LT978_16370 PF06114 IrrE N-terminal-like domain LT978_16395 PF01510 N-acetylmuramoyl-L-alanine amidase LT978_16395 PF01476 LysM domain LT978_16395 PF01471 Putative peptidoglycan binding domain LT978_16400 PF05105 Bacteriophage holin family LT978_16450 PF00041 Fibronectin type III domain LT978_16450 PF00704 Glycosyl hydrolases family 18 LT978_16520 PF10668 Phage terminase small subunit LT978_16540 PF08281 Sigma-70, region 4 LT978_16575 PF09643 YopX protein LT978_16610 PF17356 Phage-like element PBSX protein XtrA LT978_16635 PF01695 IstB-like ATP binding protein LT978_16640 PF07261 Replication initiation and membrane attachment LT978_16660 PF09466 Hypothetical protein Yqai LT978_16665 PF17448 Uncharacterized YqaH-like LT978_16670 PF01381 Helix-turn-helix LT978_16690 PF01381 Helix-turn-helix LT978_16700 PF06114 IrrE N-terminal-like domain LT978_16710 PF00118 TCP-1/cpn60 chaperonin family LT978_16715 PF00166 Chaperonin 10 Kd subunit LT978_16720 PF02517 CPBP intramembrane metalloprotease LT978_16725 PF14146 Domain of unknown function (DUF4305) LT978_16730 PF00902 Sec-independent protein translocase protein (TatC) LT978_16735 PF02416 mttA/Hcf106 family LT978_16740 PF02629 CoA binding domain LT978_16740 PF06971 Putative DNA-binding protein N-terminus LT978_16745 PF01967 MoaC family LT978_16750 PF00005 ABC transporter LT978_16750 PF16326 ABC transporter C-terminal domain LT978_16750 PF12848 ABC transporter LT978_16755 PF00814 Glycoprotease family LT978_16760 PF00583 Acetyltransferase (GNAT) family LT978_16765 PF00814 Glycoprotease family LT978_16770 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LT978_16775 PF00586 AIR synthase related protein, N-terminal domain LT978_16775 PF02769 AIR synthase related protein, C-terminal domain LT978_16815 PF00083 Sugar (and other) transporter LT978_16820 PF00107 Zinc-binding dehydrogenase LT978_16820 PF08240 Alcohol dehydrogenase GroES-like domain LT978_16825 PF08327 Activator of Hsp90 ATPase homolog 1-like protein LT978_16835 PF13520 Amino acid permease LT978_16840 PF17934 Tetracyclin repressor-like, C-terminal domain LT978_16840 PF00440 Bacterial regulatory proteins, tetR family LT978_16845 PF00893 Small Multidrug Resistance protein LT978_16850 PF00893 Small Multidrug Resistance protein LT978_16855 PF07690 Major Facilitator Superfamily LT978_16860 PF00392 Bacterial regulatory proteins, gntR family LT978_16860 PF07729 FCD domain LT978_16865 PF00392 Bacterial regulatory proteins, gntR family LT978_16865 PF07702 UTRA domain LT978_16870 PF07690 Major Facilitator Superfamily LT978_16875 PF07563 Protein of unknown function (DUF1541) LT978_16885 PF00144 Beta-lactamase LT978_16885 PF11954 Domain of unknown function (DUF3471) LT978_16900 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LT978_16905 PF00392 Bacterial regulatory proteins, gntR family LT978_16905 PF07729 FCD domain LT978_16910 PF00180 Isocitrate/isopropylmalate dehydrogenase LT978_16915 PF08241 Methyltransferase domain LT978_16920 PF00293 NUDIX domain LT978_16925 PF00892 EamA-like transporter family LT978_16930 PF06445 GyrI-like small molecule binding domain LT978_16930 PF13411 MerR HTH family regulatory protein LT978_16935 PF00583 Acetyltransferase (GNAT) family LT978_16940 PF01925 Sulfite exporter TauE/SafE LT978_16950 PF00109 Beta-ketoacyl synthase, N-terminal domain LT978_16950 PF02801 Beta-ketoacyl synthase, C-terminal domain LT978_16955 PF07690 Major Facilitator Superfamily LT978_16960 PF00465 Iron-containing alcohol dehydrogenase LT978_16965 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LT978_16965 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LT978_16970 PF13302 Acetyltransferase (GNAT) domain LT978_16975 PF00005 ABC transporter LT978_16975 PF12848 ABC transporter LT978_16980 PF07722 Peptidase C26 LT978_16985 PF03176 MMPL family LT978_16990 PF00196 Bacterial regulatory proteins, luxR family LT978_16990 PF00072 Response regulator receiver domain LT978_16995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_16995 PF07730 Histidine kinase LT978_17005 PF07875 Coat F domain LT978_17010 PF00107 Zinc-binding dehydrogenase LT978_17010 PF13823 Alcohol dehydrogenase GroES-associated LT978_17010 PF08240 Alcohol dehydrogenase GroES-like domain LT978_17020 PF07875 Coat F domain LT978_17025 PF00440 Bacterial regulatory proteins, tetR family LT978_17025 PF16859 Tetracyclin repressor-like, C-terminal domain LT978_17030 PF07690 Major Facilitator Superfamily LT978_17045 PF00392 Bacterial regulatory proteins, gntR family LT978_17045 PF00155 Aminotransferase class I and II LT978_17055 PF13411 MerR HTH family regulatory protein LT978_17060 PF00107 Zinc-binding dehydrogenase LT978_17060 PF08240 Alcohol dehydrogenase GroES-like domain LT978_17075 PF04055 Radical SAM superfamily LT978_17085 PF00701 Dihydrodipicolinate synthetase family LT978_17110 PF16916 Dimerisation domain of Zinc Transporter LT978_17110 PF01545 Cation efflux family LT978_17120 PF01565 FAD binding domain LT978_17120 PF08031 Berberine and berberine like LT978_17135 PF00293 NUDIX domain LT978_17135 PF13344 Haloacid dehalogenase-like hydrolase LT978_17140 PF07690 Major Facilitator Superfamily LT978_17145 PF00392 Bacterial regulatory proteins, gntR family LT978_17145 PF00155 Aminotransferase class I and II LT978_17150 PF01546 Peptidase family M20/M25/M40 LT978_17150 PF07687 Peptidase dimerisation domain LT978_17155 PF02311 AraC-like ligand binding domain LT978_17155 PF12833 Helix-turn-helix domain LT978_17160 PF01546 Peptidase family M20/M25/M40 LT978_17160 PF07687 Peptidase dimerisation domain LT978_17170 PF01042 Endoribonuclease L-PSP LT978_17175 PF00392 Bacterial regulatory proteins, gntR family LT978_17175 PF07729 FCD domain LT978_17180 PF00291 Pyridoxal-phosphate dependent enzyme LT978_17190 PF01734 Patatin-like phospholipase LT978_17205 PF01177 Asp/Glu/Hydantoin racemase LT978_17210 PF01925 Sulfite exporter TauE/SafE LT978_17215 PF01206 Sulfurtransferase TusA LT978_17225 PF01206 Sulfurtransferase TusA LT978_17225 PF00581 Rhodanese-like domain LT978_17235 PF13686 DsrE/DsrF/DrsH-like family LT978_17240 PF02583 Metal-sensitive transcriptional repressor LT978_17250 PF00313 'Cold-shock' DNA-binding domain LT978_17255 PF13460 NAD(P)H-binding LT978_17260 PF02082 Transcriptional regulator LT978_17265 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) LT978_17270 PF01047 MarR family LT978_17275 PF02566 OsmC-like protein LT978_17280 PF07859 alpha/beta hydrolase fold LT978_17285 PF07690 Major Facilitator Superfamily LT978_17295 PF00561 alpha/beta hydrolase fold LT978_17305 PF02525 Flavodoxin-like fold LT978_17350 PF10263 SprT-like family LT978_17360 PF17674 HHH domain LT978_17360 PF09371 Tex-like protein N-terminal domain LT978_17360 PF16921 Tex protein YqgF-like domain LT978_17360 PF00575 S1 RNA binding domain LT978_17365 PF07228 Stage II sporulation protein E (SpoIIE) LT978_17370 PF04545 Sigma-70, region 4 LT978_17370 PF04542 Sigma-70 region 2 LT978_17370 PF04539 Sigma-70 region 3 LT978_17375 PF13581 Histidine kinase-like ATPase domain LT978_17380 PF01740 STAS domain LT978_17385 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain LT978_17385 PF07228 Stage II sporulation protein E (SpoIIE) LT978_17390 PF13581 Histidine kinase-like ATPase domain LT978_17395 PF01740 STAS domain LT978_17400 PF01740 STAS domain LT978_17400 PF08678 Rsbr N terminal LT978_17405 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LT978_17410 PF01402 Ribbon-helix-helix protein, copG family LT978_17415 PF00842 Alanine racemase, C-terminal domain LT978_17415 PF01168 Alanine racemase, N-terminal domain LT978_17425 PF01648 4'-phosphopantetheinyl transferase superfamily LT978_17430 PF01694 Rhomboid family LT978_17435 PF03703 Bacterial PH domain LT978_17440 PF03703 Bacterial PH domain LT978_17445 PF00271 Helicase conserved C-terminal domain LT978_17445 PF00270 DEAD/DEAH box helicase LT978_17450 PF01225 Mur ligase family, catalytic domain LT978_17450 PF08245 Mur ligase middle domain LT978_17450 PF02875 Mur ligase family, glutamate ligase domain LT978_17455 PF01820 D-ala D-ala ligase N-terminus LT978_17455 PF07478 D-ala D-ala ligase C-terminus LT978_17460 PF00085 Thioredoxin LT978_17465 PF16916 Dimerisation domain of Zinc Transporter LT978_17465 PF01545 Cation efflux family LT978_17475 PF13040 Fur-regulated basic protein B LT978_17480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LT978_17480 PF02770 Acyl-CoA dehydrogenase, middle domain LT978_17480 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LT978_17495 PF00005 ABC transporter LT978_17500 PF01594 AI-2E family transporter LT978_17505 PF00375 Sodium:dicarboxylate symporter family LT978_17510 PF08279 HTH domain LT978_17510 PF00072 Response regulator receiver domain LT978_17515 PF17203 Single cache domain 3 LT978_17515 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LT978_17515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_17520 PF03480 Bacterial extracellular solute-binding protein, family 7 LT978_17525 PF05067 Manganese containing catalase LT978_17530 PF16291 Domain of unknown function (DUF4937 LT978_17535 PF07883 Cupin domain LT978_17540 PF00477 Small hydrophilic plant seed protein LT978_17540 PF10685 Stress-induced bacterial acidophilic repeat motif LT978_17545 PF12787 EcsC protein family LT978_17550 PF00893 Small Multidrug Resistance protein LT978_17555 PF17314 Family of unknown function (DUF5360) LT978_17570 PF01566 Natural resistance-associated macrophage protein LT978_17595 PF18801 response regulator aspartate phosphatase H, N terminal LT978_17595 PF13176 Tetratricopeptide repeat LT978_17650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LT978_17650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LT978_17650 PF00205 Thiamine pyrophosphate enzyme, central domain LT978_17655 PF00293 NUDIX domain LT978_17660 PF13520 Amino acid permease LT978_17665 PF03170 Bacterial cellulose synthase subunit LT978_17675 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) LT978_17680 PF00990 Diguanylate cyclase, GGDEF domain LT978_17690 PF01751 Toprim domain LT978_17690 PF01131 DNA topoisomerase LT978_17695 PF01037 Lrp/AsnC ligand binding domain LT978_17700 PF12823 Domain of unknown function (DUF3817) LT978_17705 PF10997 Alternate to MurJ LT978_17710 PF16242 Pyridoxamine 5'-phosphate oxidase like LT978_17715 PF13302 Acetyltransferase (GNAT) domain LT978_17730 PF00501 AMP-binding enzyme LT978_17730 PF13193 AMP-binding enzyme C-terminal domain LT978_17735 PF08279 HTH domain LT978_17735 PF05043 Mga helix-turn-helix domain LT978_17735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LT978_17735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LT978_17735 PF00874 PRD domain LT978_17740 PF00248 Aldo/keto reductase family LT978_17745 PF05223 NTF2-like N-terminal transpeptidase domain LT978_17745 PF03717 Penicillin-binding Protein dimerisation domain LT978_17745 PF00905 Penicillin binding protein transpeptidase domain LT978_17750 PF03992 Antibiotic biosynthesis monooxygenase LT978_17755 PF13129 Protein of unknown function (DUF3953) LT978_17760 PF13472 GDSL-like Lipase/Acylhydrolase family LT978_17765 PF01614 Bacterial transcriptional regulator LT978_17765 PF09339 IclR helix-turn-helix domain LT978_17770 PF02626 Carboxyltransferase domain, subdomain A and B LT978_17775 PF02682 Carboxyltransferase domain, subdomain C and D LT978_17780 PF07286 Protein of unknown function (DUF1445) LT978_17785 PF01566 Natural resistance-associated macrophage protein LT978_17790 PF03746 LamB/YcsF family LT978_17805 PF07977 FabA-like domain LT978_17810 PF01232 Mannitol dehydrogenase Rossmann domain LT978_17810 PF08125 Mannitol dehydrogenase C-terminal domain LT978_17815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LT978_17820 PF02378 Phosphotransferase system, EIIC LT978_17820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LT978_17830 PF08220 DeoR-like helix-turn-helix domain LT978_17830 PF05573 NosL LT978_17835 PF04234 CopC domain LT978_17835 PF05425 Copper resistance protein D LT978_17835 PF13115 YtkA-like LT978_17840 PF07987 Domain of unkown function (DUF1775) LT978_17850 PF06800 Sugar transport protein LT978_17855 PF00171 Aldehyde dehydrogenase family LT978_17860 PF00202 Aminotransferase class-III LT978_17865 PF00392 Bacterial regulatory proteins, gntR family LT978_17865 PF00155 Aminotransferase class I and II LT978_17870 PF01022 Bacterial regulatory protein, arsR family LT978_17875 PF03992 Antibiotic biosynthesis monooxygenase LT978_17880 PF00881 Nitroreductase family LT978_17885 PF00440 Bacterial regulatory proteins, tetR family LT978_17890 PF07690 Major Facilitator Superfamily LT978_17895 PF01497 Periplasmic binding protein LT978_17900 PF00005 ABC transporter LT978_17905 PF01032 FecCD transport family LT978_17910 PF01032 FecCD transport family LT978_17915 PF13840 ACT domain LT978_17915 PF00696 Amino acid kinase family LT978_17920 PF09680 Family of unknown function LT978_17925 PF11131 Rap-phr extracellular signalling LT978_17930 PF18801 response regulator aspartate phosphatase H, N terminal LT978_17935 PF00512 His Kinase A (phospho-acceptor) domain LT978_17935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_17935 PF00672 HAMP domain LT978_17940 PF00486 Transcriptional regulatory protein, C terminal LT978_17940 PF00072 Response regulator receiver domain LT978_17945 PF12704 MacB-like periplasmic core domain LT978_17945 PF02687 FtsX-like permease family LT978_17950 PF00005 ABC transporter LT978_17955 PF03972 MmgE/PrpD family LT978_17960 PF07687 Peptidase dimerisation domain LT978_17960 PF01546 Peptidase family M20/M25/M40 LT978_17965 PF00005 ABC transporter LT978_17970 PF00528 Binding-protein-dependent transport system inner membrane component LT978_17975 PF00497 Bacterial extracellular solute-binding proteins, family 3 LT978_17980 PF00583 Acetyltransferase (GNAT) family LT978_17985 PF00296 Luciferase-like monooxygenase LT978_17990 PF03845 Spore germination protein LT978_17995 PF05504 Spore germination B3/ GerAC like, C-terminal LT978_18000 PF03323 Bacillus/Clostridium GerA spore germination protein LT978_18010 PF12708 Pectate lyase superfamily protein LT978_18010 PF13229 Right handed beta helix region LT978_18015 PF00854 POT family LT978_18030 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LT978_18035 PF02441 Flavoprotein LT978_18040 PF03466 LysR substrate binding domain LT978_18040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT978_18045 PF00497 Bacterial extracellular solute-binding proteins, family 3 LT978_18050 PF00528 Binding-protein-dependent transport system inner membrane component LT978_18055 PF00005 ABC transporter LT978_18065 PF01648 4'-phosphopantetheinyl transferase superfamily LT978_18070 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LT978_18070 PF00155 Aminotransferase class I and II LT978_18070 PF07685 CobB/CobQ-like glutamine amidotransferase domain LT978_18075 PF00975 Thioesterase domain LT978_18080 PF13193 AMP-binding enzyme C-terminal domain LT978_18080 PF00501 AMP-binding enzyme LT978_18080 PF00550 Phosphopantetheine attachment site LT978_18080 PF00975 Thioesterase domain LT978_18080 PF00668 Condensation domain LT978_18085 PF00501 AMP-binding enzyme LT978_18085 PF00668 Condensation domain LT978_18085 PF00550 Phosphopantetheine attachment site LT978_18085 PF13193 AMP-binding enzyme C-terminal domain LT978_18095 PF17584 Bacillus competence protein S LT978_18105 PF00550 Phosphopantetheine attachment site LT978_18105 PF00668 Condensation domain LT978_18105 PF13193 AMP-binding enzyme C-terminal domain LT978_18105 PF00501 AMP-binding enzyme LT978_18110 PF01638 HxlR-like helix-turn-helix LT978_18115 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LT978_18120 PF01380 SIS domain LT978_18125 PF14040 Deoxyribonuclease NucA/NucB LT978_18130 PF11033 Competence protein J (ComJ) LT978_18140 PF10925 Protein of unknown function (DUF2680) LT978_18145 PF06271 RDD family LT978_18150 PF13823 Alcohol dehydrogenase GroES-associated LT978_18150 PF00107 Zinc-binding dehydrogenase LT978_18150 PF08240 Alcohol dehydrogenase GroES-like domain LT978_18155 PF02492 CobW/HypB/UreG, nucleotide-binding domain LT978_18155 PF07683 Cobalamin synthesis protein cobW C-terminal domain LT978_18165 PF18267 Rubredoxin NAD+ reductase C-terminal domain LT978_18165 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT978_18165 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LT978_18165 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LT978_18165 PF04324 BFD-like [2Fe-2S] binding domain LT978_18170 PF00355 Rieske [2Fe-2S] domain LT978_18175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LT978_18180 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT978_18185 PF13556 PucR C-terminal helix-turn-helix domain LT978_18185 PF17853 GGDEF-like domain LT978_18190 PF00474 Sodium:solute symporter family LT978_18195 PF00171 Aldehyde dehydrogenase family LT978_18200 PF01619 Proline dehydrogenase LT978_18205 PF10127 RNA repair pathway DNA polymerase beta family LT978_18210 PF05448 Acetyl xylan esterase (AXE1) LT978_18215 PF01202 Shikimate kinase LT978_18220 PF07690 Major Facilitator Superfamily LT978_18235 PF12197 Bacillus cereus group antimicrobial protein LT978_18240 PF02540 NAD synthase LT978_18245 PF09347 Domain of unknown function (DUF1989) LT978_18250 PF00324 Amino acid permease LT978_18255 PF08892 YqcI/YcgG family LT978_18260 PF01810 LysE type translocator LT978_18265 PF01047 MarR family LT978_18270 PF07690 Major Facilitator Superfamily LT978_18275 PF00056 lactate/malate dehydrogenase, NAD binding domain LT978_18275 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LT978_18280 PF16738 Starch-binding module 26 LT978_18280 PF00128 Alpha amylase, catalytic domain LT978_18290 PF03606 C4-dicarboxylate anaerobic carrier LT978_18295 PF01546 Peptidase family M20/M25/M40 LT978_18295 PF07687 Peptidase dimerisation domain LT978_18300 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LT978_18305 PF00528 Binding-protein-dependent transport system inner membrane component LT978_18310 PF00005 ABC transporter LT978_18310 PF00571 CBS domain LT978_18315 PF07690 Major Facilitator Superfamily LT978_18320 PF05816 Toxic anion resistance protein (TelA) LT978_18325 PF14266 Putative component of 'biosynthetic module' LT978_18330 PF03741 Integral membrane protein TerC family LT978_18335 PF02342 TerD domain LT978_18340 PF02342 TerD domain LT978_18345 PF02342 TerD domain LT978_18350 PF00296 Luciferase-like monooxygenase LT978_18355 PF00950 ABC 3 transport family LT978_18360 PF00005 ABC transporter LT978_18365 PF01297 Zinc-uptake complex component A periplasmic LT978_18370 PF03551 Transcriptional regulator PadR-like family LT978_18370 PF10400 Virulence activator alpha C-term LT978_18380 PF00128 Alpha amylase, catalytic domain LT978_18390 PF18801 response regulator aspartate phosphatase H, N terminal LT978_18395 PF13539 D-alanyl-D-alanine carboxypeptidase LT978_18400 PF16244 Domain of unknown function (DUF4901) LT978_18405 PF16244 Domain of unknown function (DUF4901) LT978_18410 PF11611 Domain of unknown function (DUF4352) LT978_18410 PF17118 Domain of unknown function (DUF5105) LT978_18415 PF00248 Aldo/keto reductase family LT978_18420 PF05225 helix-turn-helix, Psq domain LT978_18420 PF02810 SEC-C motif LT978_18425 PF01674 Lipase (class 2) LT978_18430 PF17763 Glutaminase/Asparaginase C-terminal domain LT978_18430 PF00710 Asparaginase, N-terminal LT978_18435 PF00440 Bacterial regulatory proteins, tetR family LT978_18440 PF07690 Major Facilitator Superfamily LT978_18445 PF00266 Aminotransferase class-V LT978_18450 PF01470 Pyroglutamyl peptidase LT978_18455 PF00902 Sec-independent protein translocase protein (TatC) LT978_18460 PF02416 mttA/Hcf106 family LT978_18465 PF16655 PhoD-like phosphatase, N-terminal domain LT978_18465 PF09423 PhoD-like phosphatase LT978_18470 PF07486 Cell Wall Hydrolase LT978_18475 PF10710 Protein of unknown function (DUF2512) LT978_18485 PF00085 Thioredoxin LT978_18490 PF07681 DoxX LT978_18495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LT978_18500 PF00881 Nitroreductase family LT978_18505 PF01545 Cation efflux family LT978_18505 PF16916 Dimerisation domain of Zinc Transporter LT978_18510 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein LT978_18515 PF01636 Phosphotransferase enzyme family LT978_18520 PF00072 Response regulator receiver domain LT978_18520 PF08664 YcbB domain LT978_18525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_18530 PF04960 Glutaminase LT978_18535 PF01235 Sodium:alanine symporter family LT978_18540 PF02574 Homocysteine S-methyltransferase LT978_18545 PF00324 Amino acid permease LT978_18550 PF01063 Amino-transferase class IV LT978_18555 PF00375 Sodium:dicarboxylate symporter family LT978_18560 PF00581 Rhodanese-like domain LT978_18560 PF12368 Rhodanase C-terminal LT978_18560 PF17773 UPF0176 acylphosphatase like domain LT978_18570 PF02666 Phosphatidylserine decarboxylase LT978_18575 PF09335 SNARE associated Golgi protein LT978_18580 PF01066 CDP-alcohol phosphatidyltransferase LT978_18585 PF02222 ATP-grasp domain LT978_18590 PF00465 Iron-containing alcohol dehydrogenase LT978_18605 PF08924 Domain of unknown function (DUF1906) LT978_18605 PF01471 Putative peptidoglycan binding domain LT978_18615 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LT978_18615 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LT978_18620 PF10852 Protein of unknown function (DUF2651) LT978_18625 PF07690 Major Facilitator Superfamily LT978_18630 PF03009 Glycerophosphoryl diester phosphodiesterase family LT978_18635 PF13520 Amino acid permease LT978_18650 PF17334 Minor curli fiber component A LT978_18655 PF16219 Domain of unknown function (DUF4879) LT978_18675 PF00005 ABC transporter LT978_18680 PF00072 Response regulator receiver domain LT978_18680 PF00196 Bacterial regulatory proteins, luxR family LT978_18685 PF07730 Histidine kinase LT978_18690 PF13419 Haloacid dehalogenase-like hydrolase LT978_18695 PF00324 Amino acid permease LT978_18700 PF01047 MarR family LT978_18705 PF03788 LrgA family LT978_18710 PF04172 LrgB-like family LT978_18715 PF00248 Aldo/keto reductase family LT978_18725 PF00005 ABC transporter LT978_18750 PF01380 SIS domain LT978_18755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LT978_18755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LT978_18755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LT978_18755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LT978_18760 PF07949 YbbR-like protein LT978_18765 PF02457 DisA bacterial checkpoint controller nucleotide-binding LT978_18770 PF13490 Putative zinc-finger LT978_18775 PF04542 Sigma-70 region 2 LT978_18775 PF08281 Sigma-70, region 4 LT978_18805 PF04463 Protein of unknown function (DUF523) LT978_18815 PF01380 SIS domain LT978_18820 PF02378 Phosphotransferase system, EIIC LT978_18820 PF00367 phosphotransferase system, EIIB LT978_18825 PF00144 Beta-lactamase LT978_18830 PF01915 Glycosyl hydrolase family 3 C-terminal domain LT978_18830 PF00933 Glycosyl hydrolase family 3 N terminal domain LT978_18835 PF07075 Protein of unknown function (DUF1343) LT978_18840 PF01497 Periplasmic binding protein LT978_18840 PF12833 Helix-turn-helix domain LT978_18845 PF01497 Periplasmic binding protein LT978_18850 PF01032 FecCD transport family LT978_18855 PF01032 FecCD transport family LT978_18860 PF00756 Putative esterase LT978_18865 PF01758 Sodium Bile acid symporter family LT978_18870 PF01740 STAS domain LT978_18870 PF00916 Sulfate permease family LT978_18875 PF08240 Alcohol dehydrogenase GroES-like domain LT978_18875 PF00107 Zinc-binding dehydrogenase LT978_18885 PF00202 Aminotransferase class-III LT978_18890 PF07690 Major Facilitator Superfamily LT978_18990 PF01522 Polysaccharide deacetylase LT978_18995 PF14089 KinB-signalling pathway activation in sporulation LT978_19000 PF17898 Spore germination GerD central core domain LT978_19005 PF10609 NUBPL iron-transfer P-loop NTPase LT978_19010 PF01520 N-acetylmuramoyl-L-alanine amidase LT978_19015 PF10730 Protein of unknown function (DUF2521) LT978_19020 PF05163 DinB family LT978_19025 PF08241 Methyltransferase domain LT978_19030 PF00380 Ribosomal protein S9/S16 LT978_19035 PF00572 Ribosomal protein L13 LT978_19040 PF01416 tRNA pseudouridine synthase LT978_19045 PF02361 Cobalt transport protein LT978_19050 PF00005 ABC transporter LT978_19055 PF00005 ABC transporter LT978_19060 PF01196 Ribosomal protein L17 LT978_19065 PF01000 RNA polymerase Rpb3/RpoA insert domain LT978_19065 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LT978_19065 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LT978_19070 PF00411 Ribosomal protein S11 LT978_19075 PF00416 Ribosomal protein S13/S18 LT978_19080 PF00444 Ribosomal protein L36 LT978_19085 PF01176 Translation initiation factor 1A / IF-1 LT978_19095 PF00557 Metallopeptidase family M24 LT978_19100 PF05191 Adenylate kinase, active site lid LT978_19105 PF00344 SecY translocase LT978_19110 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LT978_19115 PF00327 Ribosomal protein L30p/L7e LT978_19120 PF03719 Ribosomal protein S5, C-terminal domain LT978_19120 PF00333 Ribosomal protein S5, N-terminal domain LT978_19125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LT978_19130 PF00347 Ribosomal protein L6 LT978_19135 PF00410 Ribosomal protein S8 LT978_19140 PF00253 Ribosomal protein S14p/S29e LT978_19145 PF00281 Ribosomal protein L5 LT978_19145 PF00673 ribosomal L5P family C-terminus LT978_19150 PF00467 KOW motif LT978_19150 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LT978_19155 PF00238 Ribosomal protein L14p/L23e LT978_19160 PF00366 Ribosomal protein S17 LT978_19165 PF00831 Ribosomal L29 protein LT978_19170 PF00252 Ribosomal protein L16p/L10e LT978_19175 PF07650 KH domain LT978_19175 PF00189 Ribosomal protein S3, C-terminal domain LT978_19180 PF00237 Ribosomal protein L22p/L17e LT978_19185 PF00203 Ribosomal protein S19 LT978_19190 PF03947 Ribosomal Proteins L2, C-terminal domain LT978_19190 PF00181 Ribosomal Proteins L2, RNA binding domain LT978_19195 PF00276 Ribosomal protein L23 LT978_19200 PF00573 Ribosomal protein L4/L1 family LT978_19205 PF00297 Ribosomal protein L3 LT978_19210 PF00338 Ribosomal protein S10p/S20e LT978_19215 PF12146 Serine aminopeptidase, S33 LT978_19220 PF00009 Elongation factor Tu GTP binding domain LT978_19220 PF03144 Elongation factor Tu domain 2 LT978_19220 PF03143 Elongation factor Tu C-terminal domain LT978_19225 PF00679 Elongation factor G C-terminus LT978_19225 PF14492 Elongation Factor G, domain II LT978_19225 PF03764 Elongation factor G, domain IV LT978_19225 PF00009 Elongation factor Tu GTP binding domain LT978_19225 PF03144 Elongation factor Tu domain 2 LT978_19230 PF00177 Ribosomal protein S7p/S5e LT978_19235 PF00164 Ribosomal protein S12/S23 LT978_19240 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LT978_19245 PF00623 RNA polymerase Rpb1, domain 2 LT978_19245 PF04983 RNA polymerase Rpb1, domain 3 LT978_19245 PF05000 RNA polymerase Rpb1, domain 4 LT978_19245 PF04997 RNA polymerase Rpb1, domain 1 LT978_19245 PF04998 RNA polymerase Rpb1, domain 5 LT978_19250 PF04561 RNA polymerase Rpb2, domain 2 LT978_19250 PF04563 RNA polymerase beta subunit LT978_19250 PF10385 RNA polymerase beta subunit external 1 domain LT978_19250 PF04560 RNA polymerase Rpb2, domain 7 LT978_19250 PF04565 RNA polymerase Rpb2, domain 3 LT978_19250 PF00562 RNA polymerase Rpb2, domain 6 LT978_19255 PF05175 Methyltransferase small domain LT978_19260 PF00542 Ribosomal protein L7/L12 C-terminal domain LT978_19260 PF16320 Ribosomal protein L7/L12 dimerisation domain LT978_19265 PF00466 Ribosomal protein L10 LT978_19270 PF00687 Ribosomal protein L1p/L10e family LT978_19275 PF00298 Ribosomal protein L11, RNA binding domain LT978_19275 PF03946 Ribosomal protein L11, N-terminal domain LT978_19280 PF00467 KOW motif LT978_19280 PF02357 Transcription termination factor nusG LT978_19285 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LT978_19290 PF00471 Ribosomal protein L33 LT978_19295 PF04542 Sigma-70 region 2 LT978_19295 PF08281 Sigma-70, region 4 LT978_19300 PF05991 YacP-like NYN domain LT978_19305 PF08032 RNA 2'-O ribose methyltransferase substrate binding LT978_19305 PF00588 SpoU rRNA Methylase family LT978_19310 PF00636 Ribonuclease III domain LT978_19315 PF09190 DALR domain LT978_19315 PF01406 tRNA synthetases class I (C) catalytic domain LT978_19320 PF00132 Bacterial transferase hexapeptide (six repeats) LT978_19320 PF06426 Serine acetyltransferase, N-terminal LT978_19325 PF00749 tRNA synthetases class I (E and Q), catalytic domain LT978_19330 PF02542 YgbB family LT978_19335 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LT978_19345 PF02457 DisA bacterial checkpoint controller nucleotide-binding LT978_19345 PF10635 DisA bacterial checkpoint controller linker region LT978_19350 PF18073 Rubredoxin metal binding domain LT978_19355 PF17871 AAA lid domain LT978_19355 PF07724 AAA domain (Cdc48 subfamily) LT978_19355 PF02861 Clp amino terminal domain, pathogenicity island component LT978_19355 PF00004 ATPase family associated with various cellular activities (AAA) LT978_19355 PF10431 C-terminal, D2-small domain, of ClpB protein LT978_19360 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain LT978_19365 PF02151 UvrB/uvrC motif LT978_19370 PF05848 CtsR N-terminal HTH domain LT978_19370 PF17727 CtsR C-terminal dimerization domain LT978_19450 PF01336 OB-fold nucleic acid binding domain LT978_19450 PF00152 tRNA synthetases class II (D, K and N) LT978_19455 PF01207 Dihydrouridine synthase (Dus) LT978_19460 PF01381 Helix-turn-helix LT978_19465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LT978_19470 PF02152 Dihydroneopterin aldolase LT978_19475 PF00809 Pterin binding enzyme LT978_19480 PF01063 Amino-transferase class IV LT978_19485 PF00117 Glutamine amidotransferase class-I LT978_19490 PF04715 Anthranilate synthase component I, N terminal region LT978_19490 PF00425 chorismate binding enzyme LT978_19495 PF00291 Pyridoxal-phosphate dependent enzyme LT978_19500 PF13145 PPIC-type PPIASE domain LT978_19505 PF01430 Hsp33 protein LT978_19510 PF03309 Type III pantothenate kinase LT978_19515 PF06480 FtsH Extracellular LT978_19515 PF01434 Peptidase family M41 LT978_19515 PF17862 AAA+ lid domain LT978_19515 PF00004 ATPase family associated with various cellular activities (AAA) LT978_19520 PF00156 Phosphoribosyl transferase domain LT978_19525 PF01171 PP-loop family LT978_19525 PF09179 TilS substrate binding domain LT978_19525 PF11734 TilS substrate C-terminal domain LT978_19530 PF00069 Protein kinase domain LT978_19535 PF00092 von Willebrand factor type A domain LT978_19540 PF07228 Stage II sporulation protein E (SpoIIE) LT978_19555 PF00575 S1 RNA binding domain LT978_19560 PF04977 Septum formation initiator LT978_19565 PF09578 Spore cortex protein YabQ (Spore_YabQ) LT978_19570 PF07873 YabP family LT978_19575 PF01479 S4 domain LT978_19580 PF03819 MazG nucleotide pyrophosphohydrolase domain LT978_19580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LT978_19585 PF14667 Polysaccharide biosynthesis C-terminal domain LT978_19585 PF01943 Polysaccharide biosynthesis protein LT978_19590 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LT978_19590 PF15714 Stage V sporulation protein T C-terminal, transcription factor LT978_19595 PF03461 TRCF domain LT978_19595 PF17757 UvrB interaction domain LT978_19595 PF00270 DEAD/DEAH box helicase LT978_19595 PF00271 Helicase conserved C-terminal domain LT978_19595 PF02559 CarD-like/TRCF domain LT978_19600 PF10955 Protein of unknown function (DUF2757) LT978_19605 PF01195 Peptidyl-tRNA hydrolase LT978_19610 PF01386 Ribosomal L25p family LT978_19610 PF14693 Ribosomal protein TL5, C-terminal domain LT978_19615 PF14572 Phosphoribosyl synthetase-associated domain LT978_19615 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LT978_19620 PF00132 Bacterial transferase hexapeptide (six repeats) LT978_19620 PF00483 Nucleotidyl transferase LT978_19625 PF04026 SpoVG LT978_19630 PF01042 Endoribonuclease L-PSP LT978_19635 PF00156 Phosphoribosyl transferase domain LT978_19635 PF09182 Bacterial purine repressor, N-terminal LT978_19640 PF00288 GHMP kinases N terminal domain LT978_19640 PF08544 GHMP kinases C terminal LT978_19645 PF00269 Small, acid-soluble spore proteins, alpha/beta type LT978_19650 PF06257 Biofilm formation stimulator VEG LT978_19655 PF05582 YabG peptidase U57 LT978_19660 PF00398 Ribosomal RNA adenine dimethylase LT978_19665 PF13331 Domain of unknown function (DUF4093) LT978_19665 PF13662 Toprim domain LT978_19670 PF03990 G5-linked-Ubiquitin-like domain LT978_19670 PF06725 3D domain LT978_19670 PF07501 G5 domain LT978_19675 PF01026 TatD related DNase LT978_19680 PF01588 Putative tRNA binding domain LT978_19680 PF08264 Anticodon-binding domain of tRNA LT978_19680 PF09334 tRNA synthetases class I (M) LT978_19685 PF18277 AbrB C-terminal domain LT978_19685 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LT978_19690 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LT978_19695 PF01541 GIY-YIG catalytic domain LT978_19700 PF05175 Methyltransferase small domain LT978_19705 PF06156 Initiation control protein YabA LT978_19710 PF04468 PSP1 C-terminal conserved region LT978_19715 PF09115 DNA polymerase III, delta subunit, C terminal LT978_19720 PF03885 Protein of unknown function (DUF327) LT978_19725 PF06153 Cyclic-di-AMP receptor LT978_19730 PF02223 Thymidylate kinase LT978_19735 PF01276 Orn/Lys/Arg decarboxylase, major domain LT978_19735 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LT978_19740 PF05816 Toxic anion resistance protein (TelA) LT978_19745 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein LT978_19750 PF10764 Inhibitor of sigma-G Gin LT978_19780 PF07441 SigmaK-factor processing regulatory protein BofA LT978_19785 PF10704 Protein of unknown function (DUF2508) LT978_19790 PF02132 RecR protein LT978_19790 PF13662 Toprim domain LT978_19795 PF02575 YbaB/EbfC DNA-binding family LT978_19800 PF12169 DNA polymerase III subunits gamma and tau domain III LT978_19810 PF14437 MafB19-like deaminase LT978_19815 PF00857 Isochorismatase family LT978_19820 PF00704 Glycosyl hydrolases family 18 LT978_19820 PF01476 LysM domain LT978_19825 PF01712 Deoxynucleoside kinase LT978_19830 PF01712 Deoxynucleoside kinase LT978_19840 PF02595 Glycerate kinase family LT978_19845 PF02403 Seryl-tRNA synthetase N-terminal domain LT978_19845 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LT978_19850 PF01174 SNO glutamine amidotransferase family LT978_19855 PF01680 SOR/SNZ family LT978_19860 PF07943 Penicillin-binding protein 5, C-terminal domain LT978_19860 PF00768 D-alanyl-D-alanine carboxypeptidase LT978_19865 PF00571 CBS domain LT978_19865 PF00478 IMP dehydrogenase / GMP reductase domain LT978_19870 PF14175 YaaC-like Protein LT978_19900 PF03989 DNA gyrase C-terminal domain, beta-propeller LT978_19900 PF00521 DNA gyrase/topoisomerase IV, subunit A LT978_19905 PF00986 DNA gyrase B subunit, carboxyl terminus LT978_19905 PF00204 DNA gyrase B LT978_19905 PF01751 Toprim domain LT978_19905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT978_19910 PF04025 Domain of unknown function (DUF370) LT978_19915 PF02463 RecF/RecN/SMC N terminal domain LT978_19925 PF00712 DNA polymerase III beta subunit, N-terminal domain LT978_19925 PF02768 DNA polymerase III beta subunit, C-terminal domain LT978_19925 PF02767 DNA polymerase III beta subunit, central domain LT978_19930 PF18801 response regulator aspartate phosphatase H, N terminal LT978_19950 PF01076 Plasmid recombination enzyme LT978_19955 PF10502 Signal peptidase, peptidase S26 LT978_19970 PF01446 Replication protein LT978_19975 PF18801 response regulator aspartate phosphatase H, N terminal LT978_20000 PF01076 Plasmid recombination enzyme LT978_20005 PF10502 Signal peptidase, peptidase S26 LT978_20020 PF01446 Replication protein