 LT978_19945 NONE
        rpmH    2197 ..    2220 +  -8.9  -5.09426   AGTATTATCAGCTTA          GGCCACTGA ATAATG TCAGTGGTC           TTTTTTCACATTAAG 100 25
        rnpA    2695 ..    2713 +  -4.7  -4.70613   ATAAGAAATCTTCGT             CAAAATA GCTCA TATTTTG             TTTTCTTCACGTTTT  73 18
     spoIIIJ NONE
 LT978_00025    4236 ..    4264 +  -8.1  -5.84381   AAAGATAGCAGAAAA        CCGAAGTCCGGGT AAA ATCGGAACTTCGG        TTTTTTTATTGGTAA 100 11
        mnmE NONE
        mnmG NONE
 LT978_19975 NONE
 LT978_19980 NONE
        rsmG    8566 ..    8584 +  -2.5  -3.79687   GTAATTTAGACAGCC            TGATGTGA CAAT TC-CATCA             TATTTTCTGCAAAAT  51 37
 LT978_19985 NONE
         noc    9531 ..    9551 +    -9  -5.50723   ATACCTAAATAAAAA            CTCTCCTG ATCAG CAGGGGAG            TTTTTATTTTAATCA 100 29
         soj NONE
 LT978_19995 NONE
 LT978_00055   11435 ..   11456 + -10.3  -5.38047   AGAGAAGCGTAAAAA           CCATCTTTT TAAA AAAAGATGG            TTTTTTATATACGTC 100 29
 LT978_00070   13939 ..   13968 +  -2.3  -2.87211   GCCGTTGCTCTTATC       CTGTCTTTTTTTGT ACA ATAAATAAAG-CAG       TCTATGGAGAGAGGT  41 58
 LT978_00075   14199 ..   14210 +  -3.6  -2.57672   GAGCCTACATCATAA                GGGC TGGC GCTC                 ATGCTTTTTCATATA  45 26
 LT978_00080 NONE
 LT978_19930 NONE
        ychF   17525 ..   17535 +  -2.6  -3.27476   ATATAAACTTGTGAG                 TAAT AGA ATTA                 TTGCTCCTTGCCCAT  46 75
        rpsF NONE
        ssbA   18410 ..   18426 +  -6.5  -3.45033   AGCCGATTGACATCT              CGGATGA TGA TCTTCCG              TTCTAATAGATTATC  63 3
        rpsR   18728 ..   18753 + -13.3  -5.71712   TAAGCCGAAAGAAAA         GAGCAAGAGCC TGCG GGCTCCTGCTC          TTTTTTTATATCAGC 100 38
 LT978_00105 NONE
 LT978_00110 NONE
         xth   20802 ..   20828 +  -8.8  -5.24129   ATTTATGATGAGATA         GCAGTAAGAG AAATCCA CTCTTGCTGC         TTTTTTATCACCAAA 100 33
 LT978_00120   21796 ..   21814 +  -2.5  -3.93583   CGGAAAAAGTCTTGA            GC-TGAAA TGGG TTTCATGC             TTTATAACTAGATTG  53 26
 LT978_00125   22233 ..   22254 + -15.9  -4.79174   GAAATCACAGTGTAA           CAGTGCGGG GGAA CCCGCACTG            TTTTATTGATTAAAT 100 26
 LT978_00135   24690 ..   24715 + -11.2  -3.02186   TGTGAAAAAAGAAAA         GCAGCAG-GCC GCCTA GGCTCTGCTGC         TGATTTGTAAGATGT  79 10
 LT978_00165   31685 ..   31695 +    -4  -5.02323   GTTTTAAATATGCAT                 TTGA AGG TCAA                 TTTTCTTTATGATGA  73 245
 LT978_00175   34034 ..   34044 +    -4  -3.48593   GTTAGAGAGGGCTGC                 GATA TAT TATC                 TTATGTCAGGAAATA  51 92
 LT978_00180   34619 ..   34649 + -14.3  -2.71364   TTTCGGCTGATCATA       TGTAAAAGCGATT ATATG AATCGCTTTTACA       TACTTAGAAACATGC  95 159
 LT978_00195   36725 ..   36742 +  -2.1  -2.62788   ACTAGCCGATAGGCT             TATTTTT AACG AAAAGTA              TCAATTATGGTATAT  40 140
 LT978_00200   37678 ..   37696 + -11.7  -5.40072   AATCATTAAGAAGGA             GCTGCCG TTCAC CGGCAGC             TTTTTTTAAAAAAGG 100 32
 LT978_00205 NONE
 LT978_00210 NONE
 LT978_00215   39309 ..   39333 + -12.2  -5.94214   GCAGACGGAGTGAGT          GAGGGTTTCC GGAAA GGAAGCCCTC          TTTTTTTATTCTGTT 100 40
 LT978_00220   40788 ..   40799 +  -4.4  -2.87132   GTGTAGTATAATTAG                GAAC GTAC GTTC                 TATATCGAGAGAGGA  48 40
 LT978_00225   41335 ..   41359 + -14.4  -2.64616   TAAACAAAAAGTAAA          CAAGACAGCC AACGC GGCTGTCTTG          TGATATCCGTAAAAA  95 27
 LT978_00255   48154 ..   48180 + -10.2  -6.25578   GCTCAAAAATAAGAA         GCAGCAAAGGAT TAA ATTCCTTGCTGC         TTTTTTTTATTTCAT 100 29
 LT978_00265   49136 ..   49156 +  -4.7   -4.7219   ATTGCGGCGTCAAAA            GAGCAGT CGTCTAA GCTGCTC            TTTTCTATTCGTATG  72 203
 LT978_00270 NONE
 LT978_00275   52137 ..   52148 +    -3  -2.54434   ATTTTGAGGGAGGCG                TTCA GAGA TGAA                 GGTTATTTTCTTACA  41 15
        rplI   52608 ..   52624 + -15.1  -5.58454   ATACACAATGAAAAA              CCCGCCG ATC CGGCGGG              TTTTTTTCATGTCAG 100 40
 LT978_00285 NONE
 LT978_00290 NONE
 LT978_00295 NONE
 LT978_00300 NONE
 LT978_00305 NONE
 LT978_00310   59403 ..   59423 +  -9.7  -3.56594   GTGATTCTGCGAGCT            TTTGCGCCG TTT CGGCGGAAA            TTTGCAGCGGTTTCA  74 515
 LT978_00320   59773 ..   59792 +  -9.2  -4.63218   CATCGAATAAGAAAA            GCCCTCGC ACGG GCGAAGGC             TTTTCTTAAAAGGAA  88 31
        dnaB   61532 ..   61553 + -10.2  -5.52384   CGGCAGGTGCGTAAA           GCCTCAAG CAATGT CTTGAGGC            TTTTTTTCATCCGAA 100 27
 LT978_00335   62075 ..   62093 +  -6.7  -4.87626   AAATGACTGTCTGAA             GAACCTG GGATA CGGGTTC             TTTTTCATGTTAAAG  81 39
        purA   63607 ..   63630 + -16.8  -5.71712   AGAATTTGCAGCAAA          CAAGCCTCCG GTCA CGGAGGCTTG           TTTTTTTATGTAGGA 100 40
 LT978_00345 NONE
 LT978_00350   63984 ..   64025 +  -6.8  -3.27022   ATTGCTAACTCCTTA TTTGTCCTCGGAGGACCG CCACGATA CGGTTCTCCG-G-ACAAA TTACTGTAAGGTCCG  61 56
 LT978_00355   64146 ..   64162 +    -3  -3.14132   ATAGAAAAGAAACAT             CTG-GCT CGGT AGCTCAG              TTGGTAGAGCAACGG  44 60
 LT978_00360   64231 ..   64252 +  -8.7  -5.92399   AGCCACTTACCCAAA           CGCATCTGC AATA GTAGGTGCG            TTTTTTCTTTTGTTA 100 34
        walR NONE
        walK NONE
        yycH NONE
        yycI NONE
 LT978_00385   70064 ..   70089 +  -2.5  -4.60041   ATACCGATCCGAAAA         TTCCGACGCCGC TGT GCGCCGT-GTAA         TTTTTCCAAATGAAT  62 0
 LT978_00390   71378 ..   71397 +   -15  -5.59655   ACAGAAATAAAAAAG            CAGCCCGG ACAT CCGGGCTG             TTTTTTATTGATTTA 100 31
 LT978_00395 NONE
 LT978_00400   73654 ..   73676 +  -9.9  -3.81488   CTGCTAGTAAAGCCG           TGACTCCCC TTTTT GGGGAGTTA           TTATCTTTCAGGGGG  81 213
 LT978_00405 NONE
 LT978_00410 NONE
 LT978_00415 NONE
 LT978_00420 NONE
 LT978_00425   79626 ..   79645 + -13.6  -5.72616   CAGATATAAACGAAA            GGCTGAGG AGCA CCTCAGCC             TTTTTTTGTATGGAT 100 32
 LT978_00435 NONE
 LT978_00440   82177 ..   82204 + -13.6  -4.37886   TAAATAATTGTTGAA        TAGGAGCAATCT AATT GGATTGCTCCTA         TTTTGTCAGCAGTAA 100 34
 LT978_00445 NONE
 LT978_00450 NONE
        rocF   86200 ..   86217 + -12.7   -5.7946   ATTATAAAATATGCG             CCTCCGC ACCT GCGGAGG              TTTTTTTGTTGCCAC 100 34
 LT978_00460 NONE
 LT978_00465   88073 ..   88093 + -10.4  -4.93661   AAGCTGTCATGAAAA            GAGGCCCG CACGC TGGGCCTC            TTTTGTTATTCATCT  93 29
 LT978_00475 NONE
 LT978_00480   91207 ..   91226 +  -6.4  -4.91109   GAACATTTCGGAAGA            GCTTGCCG CTTT TGGTAAGC             TTTTTATAATGAAAC  81 48
 LT978_00485   91646 ..   91671 +  -8.3  -4.60889   GAGAAAACACGTAAA         GAGCCGGATGCT GAA AACA-CCGGCTC         TTTTTGCGCGTCATT  86 27
 LT978_00490 NONE
        rlmH   92632 ..   92642 +  -6.8  -4.45577   ACTGTTTAGAAAGGG                 GGAG GTT CTCC                 TTTTGTCGAATTTAT  75 129
 LT978_00500   94186 ..   94196 +  -2.6   -3.1236   CTAATAAATCTTTCA                 TATT CGC AATA                 TACTTTTGCAATTTA  44 259
 LT978_00505 NONE
 LT978_00510 NONE
 LT978_00515   98008 ..   98018 +  -3.2  -3.37099   GTTTCTAAGGAAGAA                 GTAC AAA GTGC                 TCTATTTAGTATTTT  48 125
 LT978_00520 NONE
 LT978_00525 NONE
 LT978_00530  100058 ..  100086 + -14.1  -3.11073   TAACAAACTATCTAA        TTTTGGGTTTGAT ATT GTCAAACCCAAAA        ATTTTCAATAACCTA  95 159
 LT978_00535 NONE
 LT978_00540 NONE
 LT978_00545 NONE
 LT978_00550 NONE
 LT978_00555 NONE
 LT978_00560  106836 ..  106863 +    -7  -2.66329   CGCAACCGTAAAAAA        AGAGCTCAGAGA ATTA TCTCTGAACTCC         ATATTCTTCACTTCA  59 43
 LT978_00570  110679 ..  110703 + -12.9  -5.85244   TTGAATGGCTTCAGA          CGGTGTACTGC CAT GCAGTATGCCG          TTTTTTGTTTTGATT 100 37
 LT978_00575  112056 ..  112075 + -13.6  -4.32201   TTCATATTTAAAAAA            GCCGCCAT ATGA ATGGCGGC             TTTTACATTAATTCC 100 41
 LT978_00590  115231 ..  115254 +    -6  -5.71712   TATAAACAACCCGGG          TGCTGCAC ATGATGTC GTGCAGCG           TTTTTTTCTCTCCGA 100 82
 LT978_00610  117893 ..  117903 +    -4    -3.484   GAAAATACAAATATT                 TCAT AGG ATGA                 TTATGGTATGATGAA  51 62
 LT978_00615  119205 ..  119243 + -14.3   -3.5774   TTCGGGGCAAAAAAA  TAATAAAAAAGAATCCGC GCAC GCGGATTCTTTTTT-TTA   TTTAGAGGCTTGAAT 100 23
 LT978_00625  121891 ..  121917 + -11.6  -5.36314   GAGGATGATGAAAAA         GAACTCGGCC GAAAACA GGCCGGGTTC         TTTTTTGCTGTTTTC 100 39
 LT978_00630  123159 ..  123184 +   -12  -3.71998   CCTGATACGGCGCAC         GGCTCTTTCT CTTATC AGAAAGAGCC          TTCTCTTCATGCGTG  90 36
 LT978_00635  124399 ..  124411 +  -3.4  -3.33815   AAAAGGATGGTAGCA                GATG ATCAA CATC                TTCATTGCCGAGGAT  48 21
 LT978_00640  125019 ..  125038 +   -10   -5.9218   CCCTCAGCTTGTTCA            GCCAGTGT TTTT GCACTGGC             TTTTTTTATTATCTA 100 45
 LT978_00650  126246 ..  126268 +  -8.5   -5.5112   GAAAGAAGCAGAGAG           GAGAGGATG ATCAA CATTCTCTC           TTTTTTATTGATAAA 100 16
        htpG  128317 ..  128341 + -15.8  -5.27477   GTATGACGCCAAAAA          GGAATCGCCC AGCGG GGGCGATTCC          TTTTTTGATTACAGT 100 35
        iolA  133545 ..  133572 + -11.3  -5.09259   TGATCAGACAGCCGG        CCCGGACGG CTTTGTGATT CCGTCCGGG         TTTTCTTTTACCATC  93 38
        iolB NONE
        iolC NONE
        iolD NONE
        iolE NONE
 LT978_00700 NONE
 LT978_00705 NONE
 LT978_00710  141550 ..  141593 +  -8.9  -2.55351   GCATAAGCTGAGTAT GGAGTTCGGCGGAGCGGG GCAAAAAAG CCC-TTCAGCCGGACTCC CTTCATATCGAAAAC  67 35
        iolI NONE
        iolJ  143358 ..  143372 + -11.4    -5.626   TGATGAAAACGGAAA               CCGCCA AGA TGGCGG               TTTTTTTGTGCGGTG 100 38
        yxdJ NONE
        yxdK  145152 ..  145184 +  -2.8  -5.31877   ATAGCTCATTCTGTT      TCCCCTTGAT AACATGGATTTAC GTCAAGGGGA      TTTTTTATGCTGAAT  73 61
        yxdL NONE
        yxdM NONE
 LT978_00745  148248 ..  148273 +    -9  -6.28401   AAGTGAACATGAAAA         ACGGCACAGT GTCATG ACTGTGCCGC          TTTTTTTATTTTTTA 100 35
 LT978_00755  149771 ..  149799 +    -9  -3.64703   AGAGATAAAAACAAA       TGACAAAGC-CGG TATC TCGCGCTTTGTCA        TTTGCATGACCGGCC  74 33
 LT978_00770 NONE
 LT978_00775  151747 ..  151762 +  -3.2  -4.37737   TATAGGAAGAGAAGG              CGGAGA AACT TGTCCG               TTTGATTTTTCATTG  62 5
        yidA  152649 ..  152667 +  -7.4  -5.02476   GTGCTGAAAAAATAG             GCACCC CATCAGA GGGTGC             TTTTTTACGGCGTGT  85 26
 LT978_00785  153709 ..  153723 +  -2.8  -2.78384   CATATGTTCAAAATT               CGGTTA TTC TAAACG               TATCCTAGGAAAAAG  42 74
        deoC  154423 ..  154453 +  -9.7  -3.95676   AGCGACTATTAATCA       GCATTGCGGAAGC CGAAA GCTTCCGCCATCC       TCTTTCTTTGTTGAT  83 29
 LT978_00795 NONE
 LT978_00800  157032 ..  157056 + -10.1    -5.626   GAATAAGACAAAAAA          GGCACATAC CTCATCA GTATGTGCC          TTTTTTTATGGCATG 100 35
 LT978_00835  166172 ..  166196 +  -5.8  -5.52023   GAGTGAAGTGAAAAA         GCACCTACTCCA GTT TGGAG--GGTGC         TTTTTTCTTGCTAAT  89 30
 LT978_00840  166773 ..  166783 +  -5.4  -3.69434   TCTGGGACAGGCTGA                 TGGA GCT TCCA                 TTTGACATTCATTGG  59 57
 LT978_00850  170567 ..  170584 +  -4.7  -5.52384   TTCATTAAACAGAAG             ACCCTGC TGAT GCGGGGC              TTTTTTTAATGAGAA  85 33
 LT978_00855  171620 ..  171636 + -11.5  -6.09196   AGCACCCGTATATAG              GCGGCCG TAT CGGCTGC              TTTTTTTGTTTTGGG 100 26
 LT978_00860  172835 ..  172851 + -15.1  -5.72616   CCATAATACGAAAAA              CCGCCGG CAG CCGGCGG              TTTTTTTATATGAAT 100 35
 LT978_00865 NONE
 LT978_00870  180427 ..  180456 + -12.4  -3.79787   ATAACTAAAAACTTT       TTAAGAGAGACA ATTTTC TGTCTCTCTTAA        TTTAAATTCCTGTGA  90 40
 LT978_00875  181105 ..  181118 +  -2.4  -2.71791   GCAACCTTTTTAACC               TCTG CACGTA CAGA                ATTTAGACACGACAT  40 50
 LT978_00880 NONE
 LT978_00885 NONE
 LT978_00890  182501 ..  182519 +  -7.4  -4.07568   GTCTATTAATGTGAA             GAGAGGTT CCC GGCCTCTC             TTTTCACCCAAAACG  73 40
 LT978_00895 NONE
 LT978_00900  183379 ..  183397 +  -9.6  -4.63218   TAAATAAACAAATAA             GAGAGGTT CCC AGCCTCTC             TTTTCTTAAAGGACA  88 38
 LT978_00905 NONE
 LT978_00910 NONE
 LT978_00915 NONE
 LT978_00920 NONE
 LT978_00925 NONE
 LT978_00930 NONE
 LT978_00935 NONE
 LT978_00940 NONE
 LT978_00945  188610 ..  188626 +  -9.4  -5.41746   AAATAAAAAAAGAAA              GCCTGC CGCGC GCAGGC              TTTTTTTACGCCGTT 100 35
 LT978_00960  191852 ..  191873 + -13.1  -5.26875   ATAATGTACAGAAAA           GGATTTCCG CCAG CGGAAATCC            TTTTTTAATTAAAAC 100 37
 LT978_00970  195425 ..  195447 +  -8.4  -5.55769   TATAAGAATGAAAAA           GCGCCTTTTT ATG AGAGGGGCGC           TTTTTTCTTGTGAAA 100 36
 LT978_00975  195952 ..  195974 + -10.6  -5.14563   ACCTTCACGGTAAAA           GAGGCGTGGA TTA TCCATGTCTC           TTTTTTCATGGAGAA  93 28
 LT978_00980  196770 ..  196800 + -11.9  -6.09196   TATCAATAAAAAAAA       GCGATATCACTCC AAAAC GGAGCGGTATCGC       TTTTTTTCTTTTACC 100 32
 LT978_00990  199497 ..  199515 + -10.3  -5.95539   TCTGTAAACAGAAAA             GACACGC TGATC GCGTGTC             TTTTTTTATTTCCAG 100 34
        galE  204697 ..  204721 + -10.8  -4.81814   AGGTGTAAAAAGAAA          GAGACCTTCA AATGA TGAGGGTCTC          TTTTGTTATGATGAT  91 33
 LT978_01025  206634 ..  206653 + -11.4  -5.88565   CTAAATAAAAAGGAT            CCCTCTGC CGGC GCGGAGGG             TTTTTTTCTTATGCC 100 33
 LT978_01030 NONE
        ugpC  208911 ..  208930 +  -9.3  -5.58454   GCTCATAATGCAAAG            CCGGACA GCTGGA TGTCCGG             TTTTTTTGATGTAAC 100 33
 LT978_01040  209850 ..  209869 +   -15  -5.58209   TGATGAAATAACAGA            GCCTCCGC ATAT GCGGAGGC             TTTTTTTCAGTTTAA 100 30
 LT978_01050  213116 ..  213132 +  -5.1  -2.79117   AGTCAGGAGGTCTAC              CATGGGG TCA CTTCATG              ATCTTTGGTTTGTAC  50 8
        cydB NONE
        cydD NONE
        cydC  217565 ..  217584 + -10.7  -5.63504   CGATCAGAACATAAA            CAGCCGC AAACGA GCGGCTG             TTTTTTTGTGCGGTT 100 27
 LT978_01070  218489 ..  218515 +  -8.7  -5.46706   AATATGAATAAAGAA         AAGGCGTCTTC ATAGG GAAGGCGCCTC         TTTTTGTTTTAACCT 100 30
 LT978_01080  221170 ..  221187 +  -7.7  -5.99154   TTAGCTCAAAAAAAA             CAGGACG CGAT TGTCCTG              TTTTTTTATTTAATA 100 37
 LT978_01150  235096 ..  235114 + -11.7  -5.46629   TGTCCGCATCCCGAA             CAGCCGG CTGAT CCGGCTG             TTTTTTTACGGTCTT 100 201
 LT978_01155  237230 ..  237249 +  -6.6  -2.93348   AAAAAGCCTGAGTAG            TTATGAAA GCGA TTTCATAA             TATGATGTTACTAAC  58 47
        licB NONE
        celB NONE
 LT978_01170 NONE
        licH  240680 ..  240697 +  -8.4  -5.43514   AGAGCAGTAAAAAAA             CCCGGA TTCGCT TCCGGG              TTTTTTGCTTATTTT 100 40
 LT978_01210  247659 ..  247682 +  -7.5  -5.94713   TGATCAAATGAAAGG          GCAAATGCT ATAACC GGCATTTGC           TTTTTTTTATGACAT 100 38
 LT978_01215  248426 ..  248465 + -19.4  -5.20783   ACGATTGACCCGTCA  CAACCAGCCGGACCGC TATTATGT GCAGTCCGGCTGGTTG   TTTTTATGTTTAGGT 100 41
 LT978_01220  249547 ..  249578 +  -9.5  -6.25741   CAGGTGTGATGAAAA      CGCTTGTGAAACCG TTGAC CGGCT-CACAAGCG      TTTTTTTTATTATTT 100 42
        celB  252827 ..  252842 + -11.8  -5.42259   GAAACATAAAAAAAA              CGGGCG CTTT CGCCCG               TTTTTTTAACGCTGG 100 32
 LT978_01240  254527 ..  254565 +  -3.3  -3.72576   AGGATATCATTTATA  GCG-TGGAAAGAGGG GGAAAAGAAAA CCCTC-TTCCATCGC  TTTAATACGGGACAA  53 39
 LT978_01265 NONE
        thiM NONE
        thiE  259482 ..  259504 + -10.5  -5.03994   CGGCGCTCCAAAGCA           GGGCTGTCC CGATA GGGCGGCCC           TTTTTCTGTGTGCGC  93 11
        efeB  261158 ..  261177 +   -10  -5.40072   CTGCTGGAATCGTGA            CACCTTCC ATAT GGAGGGTG             TTTTTTTAAAAAAAC 100 26
 LT978_01290  261854 ..  261878 +  -8.6  -3.64866   AAACGTTAGTAAAAA         GCCCTCTTTGC ATCA GCG-AGAGGGC          TTTGCCATATAGTGT  74 32
 LT978_01310  264635 ..  264646 +    -3  -3.33315   GCTACAGAGAAATTA                TGAT GTAT ATCA                 TTATGGGGATATTCA  46 103
 LT978_01315  265030 ..  265053 +  -2.4  -2.82516   GTGTCATAACCGTTT          CTTTCCGCGTC CCG GGGG-GGAAAG          TGTAATGGTGGAAGG  41 32
        galT  266800 ..  266823 +    -8  -6.00086   CTCTACCGGAAAAAA          GCCCCATCCC ATAA GGGACGAGGC           TTTTTTTTATCCTCT 100 12
        qoxA NONE
        qoxB NONE
        qoxC NONE
        qoxD  271527 ..  271550 + -13.2  -5.33866   AGGAATAAAAAGAAA          CCCTCTTCGT TCAG GCGAAGAGGG           TTTTTTGTGCCTTTA 100 33
 LT978_01360  272577 ..  272598 + -10.9  -5.24129   AAACATAGACTGAAA           CCCCTTTTC TGAC GAGAAGGGG            TTTTTTATCGGAAAA 100 28
 LT978_01365  273969 ..  273991 +  -9.1  -5.95539   CAATTCTTAATGTGA           GACGGCTCG TTTTT CGGGCTGTC           TTTTTTTGTTTAGAG 100 31
        nfsA  274824 ..  274843 +   -10  -5.88197   AGAATTAAGAAAAAA            CCTCTCCT GACC GGGAGAGG             TTTTTTTATGTTTCA 100 33
 LT978_01375  275993 ..  276014 + -11.6  -3.77953   TTAATCAGAAAGAAA           CCCTGCTG ATGCTC CAGCAGGG            TTGTTCGGTTATTCA  86 37
 LT978_01385 NONE
 LT978_01390  280132 ..  280151 +  -9.4  -6.06723   AACCCGGAATAACGC            GTCTGTTT CGAG AAACAGAC             TTTTTTTTTGAAAAC 100 29
 LT978_01395 NONE
 LT978_01400  283225 ..  283247 +  -3.4  -2.50789   TTCTTCAAACGAAAG           CCTATGATTC CAG GAATAAAAGG           AGTTGTTTTCTCAGT  43 86
 LT978_01405  283504 ..  283525 + -12.3  -4.10507   AAAAAAATGAAATAA           TCCCCCTCG ATCA TGAGGGGGA            TATTTATTTTATTTT  95 26
 LT978_01415 NONE
 LT978_01420  285442 ..  285464 +  -2.7  -5.24989   ATGGGTTTTTACGCA          GG-CAGGCAG AGAC TTGCCTGATC           TTTTTTACTATATAC  73 5
 LT978_01425 NONE
 LT978_01430 NONE
 LT978_01435  287636 ..  287660 + -17.9  -5.27779   TAAACGGTTTTTTGA          GGCGCTTCCGC CCG GCGGAAGCGTC          TTTTTTGATGTTCCG 100 38
 LT978_01440 NONE
 LT978_01445 NONE
 LT978_01450  289887 ..  289915 +  -5.4  -5.07011   TTATAAAGAAAAAAA       GCCAATC-CTC TGTCAAGT GAGCGATTGGC        TTTTTGATTTATCTC  78 35
 LT978_01460 NONE
 LT978_01465 NONE
 LT978_01470 NONE
 LT978_01475 NONE
 LT978_01480 NONE
 LT978_01485 NONE
 LT978_01490 NONE
 LT978_01495 NONE
        rfbB NONE
        rfbD NONE
 LT978_01510  300908 ..  300928 +  -9.8  -5.33785   CGGTAGCGCACAAGA            CGAAGACA GCGGA TGTCTTCG            TTTTTTGTGCTGGTT 100 35
 LT978_01515  301588 ..  301605 + -11.3  -5.60993   TAATCCGGGATGAAA             GAGGCTG ACAA CAGCCTC              TTTTTTTATGCGCAA 100 38
 LT978_01520  303056 ..  303106 + -15.1  -3.60792   GGTATAAGTGTTATC CGCAAAGAGATTTTGC-ATCAGTT ATAT AGCGGATCGCAAAATTTCTTTGCG TTTCCAGATTGCAGC 100 34
        pruA  304814 ..  304841 +  -4.9  -4.64844   TTAATCTTTCGGAAA        TAGCGCGAT GAAAAAGAGA GTCGCGCTA         TTTTCTCTATATGAG  70 37
 LT978_01530 NONE
 LT978_01535  308008 ..  308030 + -11.2  -4.32131   CGGATAAGAAAAAAA           GCCCTTCGCT TAA AGCGGCGGGC           TTTACTTTGTTTTCC  88 34
 LT978_01545  310734 ..  310752 + -10.4  -4.53163   AATGTAAATTTTTAA             CACCTTAT ATC ATAAGGTG             TTTTCTAATATATAG  89 64
 LT978_01550 NONE
 LT978_01555 NONE
        bacC NONE
 LT978_01565 NONE
 LT978_01570 NONE
 LT978_01575  316745 ..  316765 + -15.5  -5.25699   CTTCATTACAAGAAA            CATCCCGCT GAG AGCGGGATG            TTTTTATTATATGCT 100 15
         pta  319679 ..  319700 + -12.3  -5.60993   CTGTAATCCGCAAAA           GCCGGTCTT TACG AGGACCGGC            TTTTTTTATAGAAAG 100 35
 LT978_01600 NONE
 LT978_01605  322598 ..  322616 +  -8.8  -5.95286   TCGGCACGCAGGAAA             GCTTGGAC TGA GTCCGGGC             TTTTTTATTTTTGGT 100 15
 LT978_01610 NONE
 LT978_01615 NONE
 LT978_01620 NONE
 LT978_01625 NONE
 LT978_01655  329813 ..  329833 +  -8.9  -5.26875   TGCATTTTTACGACA            GCCTCGCCC GAT GGGTCAGGC            TTTTTTGCTTCAAAA 100 44
 LT978_01660 NONE
 LT978_01665  331830 ..  331854 +  -9.3  -5.16038   TTTTTTATGAAAAAA         CCAGGC-CGC GATGAA GCGGGCCTGG          TTTTGTTTATTGTCT  91 59
 LT978_01675  334171 ..  334185 +  -3.4  -4.66535   CAATGATCTTTTCTT               CGGCTG CGC CTGTCG               TTTCTTTTACGGCTT  69 146
 LT978_01685 NONE
 LT978_01690  335654 ..  335696 + -11.4   -3.5394   GATACAGAATCAGGA CATGGAAAGTCCCGAGCC GAACCAA GACTCGGGGTTTTTCATG TTTACGCGGAGGTTT  85 107
 LT978_01695  336142 ..  336176 + -12.8  -5.00616   CTTGAGGAAGACGCG     GATTAAGCCCGGCGCG CAA TGCACCGGGCTCAGTC     TTTTTTGCCGAGCCA 100 20
        speE  339282 ..  339302 +    -9  -5.00616   AAATAAAAACGTACG            GCGCAGGA GCGAA TCTTGCGC            TTTTTTACAGGAAAG  91 35
        speB  340214 ..  340239 +  -7.5   -5.1764   AAATAGAAAGAATTT         CCCCCCGCT-TG AAA CATGGCGGGGGA         TTTTTATATTGTATA  89 35
 LT978_01715  340611 ..  340624 +  -8.1  -3.38348   GAAATGAAAGAAAAA               CCCCT ATTG AGGGG                GTTTATTTATATATG  71 43
 LT978_01755 NONE
        argS  346695 ..  346718 +  -8.2  -5.83822   GTAATGATGATCAAA          GGACAAAGTC TTCG GGCTTTGTTC           TTTTTTTTGCATATA 100 37
        narK  348057 ..  348087 +  -2.6  -4.16842   GTGAGTGCAAATCAA       GTCACGTTAC AATATACATAC GCAACGTGAC       TTTCTTCGAGGTGAG  55 74
 LT978_01770  348829 ..  348848 + -10.8   -4.6902   ATTGACTGAAAAAAA            CAAGGACA GCGG TGTCCTTG             TTTTTCAGCTTGTGA  90 32
 LT978_01780  350181 ..  350201 + -11.2  -5.52384   ATGAAAATGCCGAAC            CCGGTTCT TAAAC AGAACCGG            TTTTTTTGATGACGC 100 15
 LT978_01785 NONE
        narH  355485 ..  355495 +  -2.4  -3.64369   GCTTGTCATTTTCAG                 GCGG CCC CGGC                 TCTTGTTTCTAACTT  48 3
        narJ NONE
        narI  356762 ..  356780 + -10.3  -5.31275   AAACGCACGTAAAAA             TCCCCCT GCAAG AGGGGGA             TTTTTTATGGTGAAA 100 29
 LT978_01805  357527 ..  357550 + -13.2  -4.90217   GAAGTGTCATCATAA          TCCTTTCCGC TCGT GCGGAGAGGA           TTTTTCATATGTTTA 100 26
         cls  359114 ..  359131 +  -8.5  -4.12902   CGCGGTTATTTTCCG             GCGTTTT ATAA AAAACGC              TTTTAAAACTCCTTG  79 15
 LT978_01815  360941 ..  360979 +    -8  -5.74122   TGAATAATGGAAAAA   GGATAGACGAGCGGGGGC CGG GCAGCCTCCTGTCTATCC   TTTTTTTATGTAGTC 100 34
 LT978_01835  365773 ..  365796 + -17.4  -4.65263   TATAGAAAGAAGCGG          GCCGCCGGCG CATA TGCCGGCGGC           TTTGTTTTCGCACAT 100 36
        rpoE  366613 ..  366640 + -17.2  -4.70107   TCATAAGAGTGCTAC        GCTCCCTTTCAA GAAA TTGAAAGGGAGC         TTTCTTATTTTCATC 100 121
        pyrG  368374 ..  368401 +  -8.4  -5.28176   GAAGTAATAAAAAAA        GACTTGCCTCCT TTAA AAGCGGCAAGTC         TTTTTTCTGCATCAG 100 34
       spo0F NONE
 LT978_01860  370527 ..  370550 + -12.4  -4.68545   TGTAACATCCATAAA          CCGCCTGACA GCAT TGACAGGCGG           TTTTATGTCTTACCT 100 46
         fsa  371274 ..  371307 + -12.5  -2.99568   AATAAGGGGCGAAAA     GG-GCGGCAAACCGGT TGC ATCCGTTTGCCGCACC     CTTATGTTTTCCTGT  91 36
 LT978_01870 NONE
        glpX  373868 ..  373896 + -17.6  -4.07568   CCGGCCATAAATAGA        GAAAAGCGGGAC GGAAA GTCCCGCTTTTC        TTTTGCAAAAAAGAG 100 31
         rho  375534 ..  375562 +  -4.6  -3.25204   GAAGCAGGCAAACCT        TTCATCATCAGC CCGCC GCTGATGAAAAA        TGTATTTGCAAATGC  52 4
        rpmE  375895 ..  375918 +   -14  -5.38047   AATAGATTTTACAGG          CAGGCAAGAA TTGC TTCTTGCCTG           TTTTTTATGTCCATA 100 42
 LT978_01895  376569 ..  376588 +  -2.8   -5.4477   CCCTTTTCATGAAAA            CATCGG TAAAAAAT CCGGTG             TTTTTTTGACGGTTT  76 41
 LT978_01900 NONE
 LT978_01905  379577 ..  379595 + -14.6  -5.27477   ACTGCATAATGAAAA             GCTCCCTG TTT CAGGGAGC             TTTTTTGATTAGAAT 100 32
        prfA NONE
        prmC  382711 ..  382736 + -16.9  -4.65916   CACATCATGAAAAAA         GCCCGCCG-GTG ACG CACACGGCGGGC         TTTTGTTACAATGGA 100 31
 LT978_01930  383048 ..  383059 +  -2.2  -4.78848   TCTGCTGATTACGCT                TCTG TAGC CGGA                 TTTTGTCTTTGCAGC  64 19
      spoIIR NONE
 LT978_01945  384807 ..  384833 + -12.4  -4.43307   TCCACTTATTAAAAA         GTGTTGTCCACA GTT TGTGGATAACGC         TTGTTTTATTAAAGG 100 62
 LT978_01950 NONE
 LT978_01955  386607 ..  386625 +  -4.6  -5.59655   AGATACGTAAAAAAA             GAAACG AAGATGC CGTTTC             TTTTTTCTTCATTTA  84 40
 LT978_01960  387210 ..  387220 +  -2.4  -3.06696   TAATAAAAAGGACAA                 GCAC ACT GGGC                 TGTCTTCGCCCAGCC  43 114
        rpiB NONE
 LT978_01970  388259 ..  388277 +  -4.6  -2.94464   TATATGAATGCGAAT             GATGAAAA TAC TTTTCCTC             TATAATGTTCGTGTT  49 24
        glyA  389666 ..  389690 + -14.3  -5.77632   TTAATAAGGAAGAAA          CCCGCCGGA ACCTTAA TCCGGCGGG          TTTTTTTATGATTTT 100 37
         upp  390423 ..  390445 +  -8.5  -5.93809   GAACCAAATAAATCG           GAAAACCTC ATTCA GGGGTTTTC           TTTTTTTTATCCAGA 100 30
        atpI NONE
        atpB NONE
        atpE  392303 ..  392318 +    -9  -4.82901   ATGTCTGATAAGCAG              GCCGTT CTGA AACGGC               TTTTTATCAGCAGAG  88 107
        atpF NONE
 LT978_02005 NONE
        atpA  394956 ..  394982 + -13.2  -4.57569   TAACCCTTAGAAGAT         GAGAGAAAAAGG TTC TCTTTTTCTCTC         TTTTTACGCAAATGA 100 38
 LT978_02015  395860 ..  395872 +  -6.9  -3.59979   TTACCGAAATTGTCG                GCGGT GCA GCCGC                TTTAGAATAGAAAGA  67 3
        atpD NONE
 LT978_02025  397756 ..  397785 + -15.9  -5.10064   CAGGAAACTAAAAAA       GAATCCTTCTCGG CTGT CTGAGAAGGATTC        TTTTTCTATATTAAC 100 30
 LT978_02035  398727 ..  398739 +  -4.7  -4.10855   ACCAATTTTTCTTCA                CCCGC TTG GCGAG                TTTTGACGAAGTTTT  63 83
 LT978_02040 NONE
        murA  400908 ..  400930 + -11.4  -5.75599   TAATGGCTGTAAAAA           CAGTATGTCA ATC TGGCATACTG           TTTTTTTATGGTTTA 100 38
      spoIID  402123 ..  402144 +  -7.3  -5.41143   TATATGGCGAAAAAA           TAGACGCTT TCAT GAGCGTCTG            TTTTTTTGAAAACTA  91 23
 LT978_02055  403074 ..  403108 +  -9.4  -5.27335   AGTTCATTAGCGAAA     TAAGAAAAGGTGCCGT TTA GCGGCCCTTTTTTTTA     TTTTTATTTAACAAA 100 23
 LT978_02060  404077 ..  404093 +  -9.4  -5.95539   AATAGGTTAAAAAAG              GACGCC CGCGC GGCGTC              TTTTTTTGTTTAGAA 100 36
 LT978_02065  404317 ..  404333 +  -5.8  -5.40072   TCGCAATGAAACATA              GAGTCC GAAGA GGGCTC              TTTTTTTAAACCGCA  85 25
        fdhD NONE
        moaA  406250 ..  406271 +  -9.4   -5.4756   GGCGGATGAAGAAAA           GCTTGCCC GGACAA GGGCAGGC            TTTTTTATTCACATT 100 32
 LT978_02080  407572 ..  407596 + -11.6  -5.61596   ATATATAATTTTTCT          TAACCATCTG ATCAG CAGATGGTTA          TTTTTTTATGCACAT 100 33
 LT978_02085 NONE
 LT978_02090  408452 ..  408469 +  -9.9  -5.18726   TGAAACACAGCAAAA             GCCCAAA ATAT TTTGGGC              TTTTTGTTATGAGAA 100 49
        ureA NONE
        ureB NONE
        ureC  411186 ..  411204 +  -9.5   -3.4096   TTTTAATCCCTCTCC             GGCCGGT TTCCC GCCGGCC             TGTTTACCCTCTATT  77 35
 LT978_02110  411709 ..  411728 +    -8  -2.56715   TGATGTAATGAATCA            TCTCTTTT GTTA AAAAGAGA             TGGGTTCATGCCGCT  62 13
 LT978_02130  415766 ..  415786 +  -6.9  -4.98255   TGCTTTATTAAAAAA            GAGCTGA CGCGCGA TCAGCTC            TTTTTGTCATTCAAA  83 30
 LT978_02145  417752 ..  417775 + -11.8  -4.44797   AATCTTGATCCCAAA          GCGTCTATCA GCTC TGATAGGCGC           TTTTCATATTGCTGC 100 39
 LT978_02150  418238 ..  418263 +  -9.7  -6.08563   GCCAAACATACAAAA         ACCGGCAGTCTG TGA CAGAC-GCCGGC         TTTTTTTTATATATT 100 11
        ftsW  420180 ..  420206 + -10.9  -3.74615   TGAAGCGAGAAAAAA        CGCCCGG-GATA TTTC TGTCTCCGGGCG         TTCTGTCTGTTTATA  84 41
 LT978_02175 NONE
 LT978_02180  423992 ..  424012 +    -9  -5.74122   CAGGCGCGAAAAAAA            GAGACGGG CTCTC CCTGTCTC            TTTTTTTGTGTAATG 100 41
 LT978_02185  425600 ..  425618 + -17.4  -4.95155   GGCCGAATAAAAAAA             GCCGGGGG CTG CCCCCGGC             TTTTTGTCATATCAG 100 31
     spoIIID  427878 ..  427899 +  -3.5  -5.31275   CGTTCAGCAGCCGTA           GCGCCTGAC GTCT GCCGGGCCC            TTTTTTCTCCTCCGG  75 25
         mbl  429068 ..  429090 +  -8.5  -5.71712   GAGCTGATGATAAAA           CCTCATTCT GAAAA AGAATGGGG           TTTTTTTCTGTCAAA 100 34
 LT978_02210 NONE
 LT978_02215  431244 ..  431264 +  -2.6  -4.25873   CCCAATACCTTTTTG            TAAAAAGG GAGGG CCTCTTTA            TCTTTTTTCTGGGCG  59 407
        fabZ  432577 ..  432596 +  -7.9  -4.52589   ATAAAAACAAACGAA            TGGGCTT ATAAAA AAGCCCA             TTTTGTATAGAAAGG  80 37
        mscL  433030 ..  433052 +  -9.1  -5.39755   TAAGGCACAAAAAAA           GGCTGGATG ATTAA CGTCCGGCC           TTTTTTATGATTATA 100 38
 LT978_02240  434012 ..  434030 +  -3.1  -3.60002   TAAAAGCAGCCCAAA             CGGATAA CGGCT TTTTCCG             CTTTTTGCTTTCATA  51 38
         ssb  434500 ..  434515 +    -9  -5.60993   CCTCCTTCCCATTCG              CCAGTC GAAA GACTGG               TTTTTTTGTGCGGGA 100 87
 LT978_02250 NONE
 LT978_02255  436363 ..  436388 + -15.5  -4.82855   AAGGACGACATAAAA         GACCGGCTCTT CCGA GAGAGCCGGTC          TTTTTGCGTTTAATG 100 103
 LT978_02270  441119 ..  441142 +   -11  -5.28683   ATATGCAACATAAAA          TCCCGCAGGCT CCT GGCC-GCGGGA          TTTTTTAATCTTCCT 100 28
 LT978_02275 NONE
 LT978_02280  442763 ..  442775 +  -5.5  -4.40561   ACAATAATGTCACAA                TGGGC GCG GTCCA                TTCTTTTTAAGGAGG  69 34
 LT978_02285  443724 ..  443738 +  -5.6    -2.924   ATGATAATAGCGGTA               AGCTGC CCA GCAGCA               ATTTCTAAACGGTTG  53 185
 LT978_02290  445092 ..  445112 + -15.4  -4.46926   TTCTGTCACTTGAAA            GGCCGGCG GTCCG CGCCGGCC            TTTTATCATACAATC 100 28
 LT978_02295  445974 ..  445994 +  -7.6  -6.06723   TGATACAAGGCAAAG            GAGACGGT TAATC ACTGTCTC            TTTTTTTTTAGGGAA 100 58
 LT978_02300 NONE
 LT978_02305 NONE
 LT978_02310  449090 ..  449101 +    -3  -3.89617   AGGAGGTAAAAATAG                TTCA TGGC TGAA                 TTTGAATTTATAAAT  53 32
 LT978_02315  449565 ..  449593 +  -7.4  -5.03314   AGAAGAATTAATTGA        CCTTGATTGGCT AGTGA AGCCTTTCAAGG        TTTTTTACAAATGAA  85 60
 LT978_02325 NONE
 LT978_02330  451590 ..  451615 +  -6.9  -5.72616   AAAAATCACATGTAA         CACTTGG-AGCT CTA AGCCACCAAGTG         TTTTTTTGTATGCCT 100 26
 LT978_02340 NONE
 LT978_02345  453444 ..  453459 +    -9   -5.0065   GGCCAAAATAAAAAA              GCACCT GTCC AGGTGC               TTTTCTTTATAAATG  91 30
         ggt  457328 ..  457347 +  -7.8  -4.72386   AAAAGACTCAAAAAA            GCCCCCTT TCGA AAGGGGTC             TTTTTGACTAGTTTC  84 489
 LT978_02385 NONE
 LT978_02390 NONE
 LT978_02395  461671 ..  461694 +  -4.6  -5.86965   CCATAAATGATAAAA          CTGCCT-CTCT TAT ACAGCAGGCAG          TTTTTTTTCATAGCT  93 35
        alsS  466030 ..  466053 +  -2.4  -2.72144   GCACTCTGCGCACCA          TGACCTGTTT TCTA AAACAGCCCA           ATTTAAAAGGAGTGA  40 40
        budA  466853 ..  466880 +  -4.9  -5.30616   GAATAAAATAAAAAA        GAAAGCCTC ATTTTTCTCG GGGGCTTTC         TTTTTATTTGGCTGA  79 35
 LT978_02420  467558 ..  467586 + -11.1  -4.48263   TCAAGAAAGAAAAAA        CGGATTTCGCG CTGAATT TGCGAAATCCG        TTTTGATATTATGTC  90 113
        pgsB NONE
        pgsC NONE
 LT978_02485 NONE
 LT978_02490  481374 ..  481394 + -11.2  -5.74122   TCCGAATCCAGTAAA            GAATGCCC ATATC GGGCATTC            TTTTTTTGTGTGCTC 100 74
 LT978_02495  482717 ..  482741 + -17.3  -5.46706   GCTTCCGTAAAAAAA          GACGTCAGAGA GTG TCTCTGACGTC          TTTTTCTTTTACCGT 100 31
 LT978_02515  487244 ..  487258 +  -2.8   -2.8032   TCAGAATCAAATCGG               CGGA CAGTTCA TCCG               TAATATTCAGTTTTA  42 8
 LT978_02520  488896 ..  488926 + -10.5  -3.97812   TCGGGATATTGAATG       CGGACTCTGTC AGAAAAGAA GACAGGGTCCG       TTTCATATTGATTCT  85 150
        manA  493640 ..  493663 + -12.6  -6.23545   ATATATAAAACCAAA          CTTAATCCCA GCTC TGGGATTAAG           TTTTTTTTATTTGGA 100 33
 LT978_02545  496424 ..  496447 + -13.2  -4.24342   GAAAGTATAAAAAAA          GGGCTGAAGT GTAT GCTTCAGCCC           TTTCTTCATGCAAAA 100 31
        tagD  499223 ..  499252 + -15.2  -3.47345   TATACAGATGATAAA       GAAGTACTCCCT CCGGAT AGGGAGTACTTC        TTGTAATATAAGGTT 100 55
 LT978_02565 NONE
 LT978_02570  503108 ..  503133 +  -7.1  -5.28481   AATAAGTGCAAAAAA         GCATAATTTAAC CAC GTTAA-TTATGC         TTTTTTGCTTAAGTG  91 40
 LT978_02575 NONE
        tagH  505680 ..  505713 + -15.5  -3.20367   AAAGTAAAGATCACA     TAAAAAAAGCTGCCG GATT CGGCAGCTTTTTCTA      TTCGTCAGCTTCTTC 100 34
        wecB  507960 ..  507997 + -13.9    -3.671   CAGCCTTTTACAGAA   TAA-AAAAAACTCTGCAT CAT ATGCAGAGTTTTTTATTA   TTTCAGGCTTTCTTT 100 23
 LT978_02600 NONE
 LT978_02605 NONE
 LT978_02610  513092 ..  513113 + -14.5  -6.28401   TTTTTTTCATGGAAA           CAGACCGGT TCAT ACCGGTCTG            TTTTTTTATTTTTTC 100 41
 LT978_02615 NONE
 LT978_02620 NONE
 LT978_02625 NONE
 LT978_02630  518001 ..  518022 +   -13  -3.04517   TTGTCTTCAGGCTCT           CGGCAGCC CGGCTC GGCTGCCG            GTTTTGGAAAGGGGT  91 49
 LT978_02635 NONE
 LT978_02640 NONE
 LT978_02645 NONE
 LT978_02650  522192 ..  522220 +  -7.3  -5.38497   GGGTATATTGAAAAA        TGCGCAATCCCAT TAA AAGGGAAAGCGCA        TTTTTTGATTTGCGT  91 10
 LT978_02655  523422 ..  523443 +  -9.5  -5.30189   GAAAAATTAAAAAGA           GCAGATCAT GCGA ATGGTCTGC            TTTTTTGCTATTCTC 100 31
        degS NONE
        degU  527538 ..  527559 + -10.2  -5.43866   AGTCATGTATGAGAA           GACTTGCC ATAATA GGCAAGTC            TTTTTTTACAGCTTC 100 39
 LT978_02680  528478 ..  528499 +  -5.1  -5.64873   AAAACTAAGTGAAAA           TCTCCGTTT TCAA GGGCGGAGA            TTTTTTATTATTAAA  85 33
 LT978_02685  529986 ..  529997 +    -3  -3.83026   AGAAAACATGATACA                GTAT ACTC ATAC                 TTTCCTATGAGGAGC  51 49
 LT978_02690 NONE
 LT978_02695 NONE
 LT978_02700 NONE
        flgM NONE
 LT978_02710 NONE
        flgK NONE
        flgL  534818 ..  534840 +  -4.1  -5.52986   CAATATATAAAAAAA          GCGA-CTCAC AACA GGGAGATCGC           TTTTTTTACTAAAAT  83 56
 LT978_02725 NONE
        fliW NONE
        csrA  536109 ..  536129 +  -6.9  -6.09196   TTATTACTTAACTTA            TCCTCAC AAAAAAA GTGAGGA            TTTTTTTATTTTCAA 100 8
 LT978_02740  537267 ..  537286 +   -10  -6.32017   GGTTAATGACGGAAA            GATCCTGG TTCT CCAGGGTC             TTTTTTTTATTTCTT 100 35
 LT978_02745 NONE
        fliS NONE
        fliT NONE
 LT978_02760  540180 ..  540201 + -12.3  -4.20084   GTATGTTCTTCACTA           GACCTGCTG CAAG CGGCAGGTC            TTTTGCCTGCGTCCT  95 25
        raiA  540952 ..  540973 + -12.3   -5.1104   AATAAACCCATCCAG           CCTTCCGTG AACG CGCGGAAGG            TTTTTCTCTATCTTT 100 36
        secA  543659 ..  543685 +  -4.2  -2.83772   ATGAAGCGAACATGA         CCGGGTCTGCGT CTT ATGGCGCCCCGG         ATCTTTTAATGAGGT  48 51
        prfB  544818 ..  544841 + -11.8  -5.66684   GTCGTAATCCGGGAA          CACACC-TGCC TTT GGCAAGGTGTG          TTTTTTTATCCGTTC 100 34
 LT978_02780 NONE
 LT978_02785  546213 ..  546235 +  -8.4  -5.29782   AAAATAACAGAAAAA           CCTTGCCTGT TAT AGGGGCAAGG           TTTTTTCTCGGTCTG 100 34
        ftsE NONE
        ftsX  547999 ..  548019 + -15.5   -5.5943   CGTGTATAAAAAAAA            GCCAGTCTG ATA CAGACTGGC            TTTTTTTAATGGTTT 100 32
 LT978_02805  551014 ..  551045 +  -6.7  -4.56607   ATTTGTAAAATAAAT      GAAA-AGGAGGCGT TTTTT GCGTCTCCTGTTTC      TTTTGTCATTCGTAA  77 28
 LT978_02810 NONE
 LT978_02815  553007 ..  553038 +  -8.7  -5.75342   CAGCATTATAAAAGA      GCCCGG-TGCCG CTAACAACA CGGCGGCCGGGC      TTTTTTTTACGGCCG 100 30
 LT978_02840  559558 ..  559582 + -11.6  -5.24129   ATATGAAATAGAATG          CCTGCTTTTA CGCCA TAAAAGCAGG          TTTTTTATACAAAAA 100 49
        uvrB NONE
        uvrA  564588 ..  564621 + -19.1  -3.64685   GTAATAGATCAATAA     CAACAGCCCAAAACT CATC GGTTTTGGGCTGTTG      TTGTTACAGGCTTTT 100 37
 LT978_02860 NONE
 LT978_02865 NONE
 LT978_02870 NONE
 LT978_02875  567078 ..  567096 +  -8.1  -5.37043   AAGGATAAAAAACAA             GCTGTCC CGAGA GGGCAGC             TTTTTTATGTGCGGT 100 33
 LT978_02880  571046 ..  571084 + -10.4  -5.71712   TAGCAAAAACATACA  CCTGCCGATCGGTCAGA AGAAAA TCTGAC-GGTCAGCAGG   TTTTTTTCTGTAACA 100 38
 LT978_02885  571880 ..  571907 + -14.3  -4.06502   GGCAGATCAAAAAAA        CATCTCCAACC CGTAAC GGTTGGAGATG         TTTCATTTCACCCTG 100 140
        hprK NONE
         lgt NONE
        ppaX NONE
 LT978_02920  577685 ..  577708 + -10.2  -5.66684   AAAACGAATGGAAAA          CCCCGCAGAT TAAC GTCAGCGGGG           TTTTTTTATGACTTG 100 13
 LT978_02930 NONE
        hisG NONE
        hisD NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
       hisIE  585100 ..  585121 + -14.5  -5.24796   CTGAGTAAAAACAAA           CCTCACGGA GAGA TCCGTGAGG            TTTTTATTCTGTCAA 100 33
 LT978_02970  587097 ..  587113 +    -8  -5.45802   CTTTATGAATAGAAA              GCAGCT GAAAA AGCTGC              TTTTTATTTTGCAGC 100 48
 LT978_02980 NONE
 LT978_02985  589651 ..  589664 +  -2.3  -3.28712   AAACGGAGGATATTT               GTGGG AAAA CACAC                TTCTGAACAGAAAAA  45 141
 LT978_02990  591105 ..  591136 +  -6.7   -5.9873   TGATATATTAGAATA      AAACCGATTCTTT CTATAT AAAGAGTCGGTTC       TTTTTTTTATCATAA 100 25
 LT978_02995  592928 ..  592950 +  -7.7  -4.84602   TAATGAATAAGACAA           GGGCCTTCT ATCCC GGAAGGCTC           TTTCTTTATTTGTAT  84 38
        trxB  594191 ..  594216 +    -9  -5.51165   TTAATGAATACACTT         TGGCACGGAT TCCAGT ATCCGTGCCC          TTTTTTTGCGATTTT 100 144
 LT978_03005 NONE
        rapZ NONE
 LT978_03015 NONE
        whiA NONE
 LT978_03025 NONE
 LT978_03030  598731 ..  598750 +  -9.2  -5.46276   TTCTCTGCAAAAAAA            CGGCCTCC GCAG GGAAGCCG             TTTTTTGTATGTGTT 100 51
 LT978_03045  601298 ..  601313 +  -3.2  -2.71924   ACAGTCAAAGGAGGA              TGCAGC TGAC GATGCA               ATTTACCGGCAGATA  43 17
 LT978_03050  602906 ..  602939 +  -9.6  -5.16151   CGGGATAAATTCAGA     TACGGCCTGTCC ATGAAAAAGC GGACGGGCCGTG      TTTTTATTCGGTTTC  91 33
 LT978_03060  604110 ..  604136 + -14.6  -4.24002   GGGTTGAAAGAAGAA         CATCCATTTCCT CAA AGGAGATGGATG         TTTTGCGGTTTCCAG 100 181
 LT978_03075  607752 ..  607778 + -15.3    -5.055   TAAAGCATAAAAAAA         CCTGCAAGAGA CATCA TCTCTTGCAGG         TTTTTTGGGCATTAC 100 31
 LT978_03090 NONE
 LT978_03095  612818 ..  612853 +   -12  -3.61902   TGCCGTTAAACGATG    CAGGATTATGCTGC ACGAGGAC GCTGCATAATCCTG     TTGTGTATAATCAAA  90 129
 LT978_03100  613030 ..  613054 + -14.4  -5.60556   AGAAGATAGGAAAAA          CCTCGCAGAT GATAA ATCTGCGAGG          TTTTTATTTTATCTT 100 50
 LT978_03115  615183 ..  615214 +  -8.2  -5.02357   ATGCCGAAGAAAGGT      AAAATACCCACCTCA GGA TGA-GTGGGTATTTA      TTTTGTTTAATTATC  91 24
 LT978_03125  615895 ..  615921 + -10.3  -5.28831   TTTGTACAAGATAAA        TTAGC-CAGCTC AATC GAGCTGAGCTAA         TTTTGTTTTATTGCT 100 27
 LT978_03135 NONE
 LT978_03140  617140 ..  617170 +  -3.9   -5.7946   AAGCTTAATGAAAAA       GACAAGGGTTTCG GCATG TGCCGCCCTTGTC       TTTTTTTATTGAACA  89 70
 LT978_03145 NONE
 LT978_03150  617999 ..  618016 +  -9.8  -5.43487   AAATAAGAGAAAAAA             CCCGGC AGCTTG GCCGGG              TTTTTTGTATCCTTT 100 35
 LT978_03160  619315 ..  619327 +  -3.3  -2.82138   AAAACCCGGTAACGG                CGGTT TTT ACCCG                ATTCTATCATTTTTC  44 29
 LT978_03165  619938 ..  619964 + -12.4  -4.97461   ATGAAATGTATGAAC         GAAACCCAGTAA AGG TTACCGGGTTTC         TTTTTCATGTTTGTT 100 42
 LT978_03185 NONE
 LT978_03190  623981 ..  623999 + -13.1  -3.10894   CTCGGCTCTGCTGTG             GGCGGCG TTTTC CGCCGCC             TTAGATGCTGGTCGT  95 82
 LT978_03195 NONE
 LT978_03200 NONE
 LT978_03205 NONE
 LT978_03210 NONE
 LT978_03215 NONE
 LT978_03220 NONE
 LT978_03225  632313 ..  632338 +  -2.3  -3.31792   TGCGCTCGAAAATCA         GCGGTGATGCC CAAT GACCGCGCCGC          TTGTGAGCGTGATCG  45 9
 LT978_03230 NONE
 LT978_03235 NONE
 LT978_03240 NONE
 LT978_03245 NONE
 LT978_03250  637278 ..  637294 +  -3.7  -3.30159   CGAAAGGGGAGAAAA              CATGG ACAGCCG CCATG              TTATGAGCCGATTAA  49 3
 LT978_03255  638232 ..  638256 + -12.2  -5.00611   CGGCACGAAGGAAAA          CCTTCCGCTT TGAAT GAGCGGAAGG          TTTATTTTGTTTCTC 100 13
        rpoN  639867 ..  639892 + -11.8  -3.42503   ACGGTACAGCTGAAA         CCTCCCCGAG CCAAAC CCCGGGGAGG          TTCTCCGTGTTACGG  85 28
 LT978_03275 NONE
 LT978_03280  643733 ..  643752 +  -6.4  -5.41746   GATCTAGAGCAGCAT            GGGAAGCT TTCA GGCTTCTC             TTTTTTTGCACCCTT  89 34
 LT978_03285 NONE
 LT978_03290 NONE
 LT978_03295  646807 ..  646833 + -15.2  -4.96848   TGACCGATAAAAAAA         CAAACCCCGGTT TGC GGCCGGGGTTTG         TTTTTATATAAACGC 100 31
 LT978_03315  652828 ..  652847 + -12.2  -5.52384   CAATAAATAAAAAAA            CTCTTGCC CCGC GGCAAGAG             TTTTTTTAATGAACG 100 35
 LT978_03325  654800 ..  654816 +  -3.7  -4.08767   TTAATTTTAAAAGAG              TTTGTCG TAT TGACAAG              TTTTGAACCGCTGAA  59 79
 LT978_03335  656478 ..  656498 + -14.1   -5.7946   AGCTGAGCAAAAAAA            GCAATGTGC CGC GCACATTGC            TTTTTTTATTCGCCG 100 35
 LT978_03345  659256 ..  659281 + -14.1  -2.92425   GAAAGCGTTTTACGA         CAAAAGTCCGC TCCG GCGGGCTTTTG          TCTGTCACCTTCATT  95 39
        cggR NONE
         gap  661650 ..  661674 + -12.2  -4.65895   AATGAAAGCGGACAA          GGGAAGGGGA CGGAC TCCCTTTCCC          TTTTTCCATGAGAAC 100 93
 LT978_03360 NONE
        tpiA NONE
        gpmI NONE
         eno  666733 ..  666755 + -19.2  -5.67063   AAGTAATGTAATGGA           CGCCGGGAGA ATA TCTCCCGGCG           TTTTTTTATGGTCCC 100 35
 LT978_03380  668177 ..  668190 +  -8.1  -5.86465   TGAAGGAATAAAAAA               CAGGC TTCG GCCTG                TTTTTTTATATTATT 100 30
 LT978_03385 NONE
 LT978_03390 NONE
 LT978_03395 NONE
 LT978_03400 NONE
 LT978_03405 NONE
 LT978_03410 NONE
 LT978_03415 NONE
 LT978_03420 NONE
 LT978_03425  677516 ..  677539 + -17.4   -4.9218   GAATGGTAAACGAAG          GGGCGCCGGT ATCA GCCGGCGCCC           TTTTTATCATAAATC 100 39
 LT978_03435  679936 ..  679959 + -11.7  -3.99805   ATTCAATAAAAAAAC          CCCCG-CGCC AATCA GGCGGCGGGG          TTTCCGTTTTTAAAA  90 32
 LT978_03445  681760 ..  681787 + -10.5  -5.63645   TCCTGACTTAAAAAA        GCAGCGCCCGG TTATCT TCGGGGGCTGC         TTTTTTCTATTTTCG 100 35
       opuCA NONE
 LT978_03460 NONE
       opuCC NONE
       opuCD  686031 ..  686049 +  -8.1  -5.88565   GCGGCATGAAAAAAA             CGCCTTG CGGGT CAGGGCG             TTTTTTTCTTATGGC 100 32
 LT978_03480  688020 ..  688032 +  -4.1   -2.5655   CTCGCGGTGATGTCA                TGAGG AGG CTTCA                ATTGATATGAATCAG  45 23
 LT978_03485 NONE
 LT978_03490 NONE
 LT978_03495  690327 ..  690349 +  -8.5  -5.77856   GCCTCATGAAAAAAA           GCATTCTTC CGCGT GAAGGATGC           TTTTTTTGATTTCTT 100 32
 LT978_03500 NONE
 LT978_03505  691867 ..  691878 +  -5.8  -3.10545   TCAAAAGGGGGAAAC                CGGT CATG ACCG                 TGCTTTTACGATATA  57 17
 LT978_03510 NONE
 LT978_03515 NONE
 LT978_03520  694706 ..  694730 +  -9.4  -5.03994   GGCGTCAGACAAAAA         CAAGCCCTGCA CGCC TG-AGGGCTTG          TTTTTCTGTATAAGA  91 8
 LT978_03540  696509 ..  696521 +  -5.5  -4.94262   GATGTACACCGATAC                GGCGT GAC ATGCC                TTTGTTTTTCATGTA  76 79
        secG  696826 ..  696846 +  -7.6  -5.29445   GCAATGTTTGTATAA            GGTCTGAT TTAAT ATCAGGCC            TTTTTCTTGTTGAGA 100 42
 LT978_03550 NONE
         rnr  700030 ..  700056 + -10.2  -4.41348   AAGTAAATGCGAAAA         GCAAATGGGGCA AAA TGCTCTGTTTGC         TTTCTTTCGCAAGCC  89 35
        smpB NONE
        ssrA  701170 ..  701221 +   -11   -3.0579   TCCATACATAACGCC GAAACCGCAGTGTTATC-AAGGCTT TCA GAGCTTTCGATGGCACTGCGGTAAC ATTTTGGCAACATTT  80 34
 LT978_03575  703211 ..  703226 +  -3.2  -2.74012   CCGGGACAACGGACA              GGCACT AAAA AGTGCG               TACTTCCCCTCATCC  44 18
 LT978_03580  704143 ..  704162 + -12.1  -5.52384   GATGAATATAAAAAA            CCCCCGC AAAGTG GCGGGGG             TTTTTTTAATGCGGA 100 41
 LT978_03590 NONE
 LT978_03595 NONE
 LT978_03600 NONE
 LT978_03605 NONE
 LT978_03610 NONE
 LT978_03615 NONE
 LT978_03620 NONE
 LT978_03625 NONE
 LT978_03630  712259 ..  712279 +  -9.8  -4.94902   CAAATCCGATTTTGA            GCAGAAAC TAAAT GTTTCTGC            TTTTTCTGCTGCTTG  93 15
 LT978_03650  716040 ..  716073 +  -5.5  -3.62046   ACTGATTTCGAGATA     TTATTGTTGCGAAAA GAAT TTTTTGTAACTATAA      TTATTACAGAACTGA  59 250
       azoRB  716807 ..  716830 + -13.8  -5.47159   TGATCTTAAAAAAAA          CCTCCCCGCC GTAC GGCTGGGAGG           TTTTTTATATTAAAG 100 38
        csoR  718344 ..  718354 +  -4.6  -2.79796   AAATGTTTTGAAATA                 CCCT ACA GGGG                 TATGGTAACATGAAG  48 45
        copZ  718613 ..  718635 +  -5.5  -5.20781   GTCGTATAAGGTTTA          TCGCGCTGCG GGAA CG-GGCGCGG           TTTTCTTTTATCATA  81 32
 LT978_03675  721105 ..  721132 +   -15  -5.45652   CAGAAGGTGAAAAAA        GACAAAATCGGC TGAT GCCGGTTTTGTC         TTTTTTATTGACACT 100 11
        cadA  723441 ..  723466 +  -6.2  -5.79595   TCTTGGTAAAATAGA        GAAGCGG--GCC ATCC GGCATCCGCTTC         TTTTTTATTTTAAAA 100 86
 LT978_03685 NONE
 LT978_03690  724580 ..  724603 + -13.2  -5.23765   GCACGGCAAAATAAA          GAGCCTGCTCC ATA GGAGC-GGCTC          TTTTTCTATTATTTG 100 27
 LT978_03700  726249 ..  726270 +  -8.8  -5.47218   AGAACAGTAAAAAAA           CCGATTTC ACAAAC GAAATCGG            TTTTTTTGCATAACG 100 31
 LT978_03705  728732 ..  728754 + -13.5  -4.99861   GGCTTATTCGTATAA           GCCCTTTGC TGAGT GCAAAGGGC           TTTTTATCATTAGTA 100 26
 LT978_03710 NONE
        cysI  732572 ..  732594 +   -15  -5.61881   GCAGCTTGCGAAAAA           GCCTGTTTTC AGA GAAAACAGGC           TTTTTCTTTTTCCGG 100 140
 LT978_03720  734826 ..  734847 +  -8.7  -5.15969   AGATGAATAAAAAAA           GTCCGGC ATCTGTTC GCCGGAC            TTTTTTAGATTACGG  91 31
 LT978_03730  736402 ..  736419 +  -9.1  -5.30616   TGTTCTAAGAAAAAA             CAGCCCT TTAC GGGGCTG              TTTTTCTTTACATAA 100 33
 LT978_03770  744107 ..  744127 +  -9.7  -5.87996   ATGAAACATGAAAAA            TCCCTCCAT ATA ACGGAGGGA            TTTTTTTATTGCTTA 100 30
        sspJ  746849 ..  746872 +   -11   -4.2535   GCTGACCATATAAGA          CGGGTAGGGC GAAC GCTCTATCCG           TTTTCCATCTAATAT  88 36
 LT978_03790  748672 ..  748695 +   -14  -5.95539   TCGGTATGACAAAAA          GACATCTCAC GTCT GTGAGATGTC           TTTTTTTGTTTGCGG 100 32
 LT978_03805 NONE
 LT978_03810 NONE
 LT978_03815  753844 ..  753865 +    -8   -5.7946   GTAAGATGAAAAAAA           CGCAGAGCC ATTCC GGC-CTGCG           TTTTTTTATTGCGCC 100 32
 LT978_03835 NONE
 LT978_03840  756849 ..  756881 +  -9.3  -4.78848   GCTCTGACAACGTGA      GAAAAACGAGAAG AGATGTC CGTCTCGTTTTTC      TTTTCTGTTTCCCCG  90 68
 LT978_03845 NONE
 LT978_03850  759419 ..  759433 +  -5.8  -3.27525   AACGGTGATTACGAT               TCTTTT TAA AAAAGA               TTGAGTTTGGACGCC  58 7
 LT978_03855  760386 ..  760421 + -16.2  -5.48063   ATGATGTAAAAAAAA    GCCCTGGCATATGGGGA AGT TCCCCTTGTGCC-GGGC    TTTTTTGTGTTAAAT 100 32
 LT978_03865 NONE
 LT978_03870 NONE
 LT978_03875 NONE
 LT978_03880  765162 ..  765185 +   -11  -5.61596   GAATAACGTTTTGTT          CAGCCGGC AGCAGCAA GCCGGCTG           TTTTTTTATAGAGAT 100 35
 LT978_03885  766599 ..  766625 + -12.3  -5.60993   AGATTTTTCGTGAAA        CGCC-CTGCGCC GTCC GGTGCAGCGGCG         TTTTTTTATGCGAAG 100 39
 LT978_03890 NONE
 LT978_03895  767842 ..  767855 +  -5.2  -3.12327   GCACAAGGGAAGATC               GGCG CTTTTA CGCC                TCTTCCCTATACGCA  52 44
 LT978_03900 NONE
        liaF NONE
        liaS NONE
 LT978_03915  771293 ..  771303 +  -6.8  -4.16016   AGGGACGGGGTCATT                 GGGA CAT TCCC                 TTTGTTCCGAAATCC  71 73
 LT978_03935 NONE
        fumC  776680 ..  776706 + -15.2  -3.36327   AAGCATAAAAAGAAA         GAACGGCTGCAG TCA TTGCGGCCGTTC         TTCTAAATAAACTGC 100 33
 LT978_03950  778199 ..  778211 +  -5.5  -4.19735   ATGTGAATCGCCGTT                TCTGC ATA GCGGA                TTTGATTTTCGAGAA  66 297
 LT978_03965  781636 ..  781660 + -10.8  -5.22794   GAGCGCATAAAAAAA          GCTGAACCTT CAACT GAGGTTCAGC          TTTTTTCGTCATTCT 100 39
 LT978_03980  784996 ..  785021 +  -7.5   -5.4833   ATCTGGAGATGAACC         G-GCCGGAGCTG TTA CCGCTCCGGTTC         TTTTTTGTTCCGTGA 100 43
 LT978_03985 NONE
 LT978_03990  786789 ..  786819 + -11.2  -5.14563   AAAAAACAATAAAAA       GCTTTCGGCATC AAAGAGA GGTGCCGGAAGC       TTTTTTGCTGAAACG  93 299
 LT978_04010  789849 ..  789867 +   -16  -5.47159   GATGATATAAAAAAA             TCCCGCGG CAT CCGCGGGA             TTTTTCTTTGTTAAA 100 106
 LT978_04035  793984 ..  793995 +    -3  -4.04482   TTTAAGATGAAAGAA                GAAA AGGG TTTC                 ATTTTTTTTGCCGAA  55 317
 LT978_04045 NONE
 LT978_04050 NONE
 LT978_04055  799425 ..  799445 + -10.4  -4.72272   GATCACATGCTGAAA            GCGCTCCT TCATC AGGGGCGC            TTTTTCATGAAGCAA  91 39
 LT978_04060 NONE
        gcvH  800340 ..  800383 +  -4.1  -4.25104   TCGGATAGCAAAGGG GCCAT-TTGGACACTCTATCTG TAA CGGG-AG-GTGTCTAAAATGGC TTTTGATAAACAAAA  62 41
 LT978_04070  800621 ..  800639 +   -11  -4.46215   CTGGTGTTAACAGTT             GGCGGTGA ATT TCACTGCC             TTCTTTTTCAATCTG  90 31
 LT978_04075 NONE
 LT978_04080 NONE
 LT978_04085  802056 ..  802083 + -11.4  -5.07652   GGCCTTTTTCAATAA        GCCTTTCTGC TCATTTTT GCAGAAAGGC         TTTTCTTTTGCGGAG 100 261
        metN NONE
 LT978_04095 NONE
        metQ  804667 ..  804687 + -16.9  -5.46629   TGAATAAAGCGAAAA            CCCCGGATG AAT CATCCGGGG            TTTTTTTCGGGTATT 100 34
 LT978_04105  805201 ..  805213 +  -2.6  -3.53012   ATTCGAAAGGATTCA                GGGG CACAC CCTC                TTTGGCCGGAGCAGC  47 98
 LT978_04110  805478 ..  805493 +  -8.2  -5.19879   TCGGTCAGTAAAAAA              GGGTGG ATTT CCGCCC               TTTTTCTGTTTCAAA 100 30
        sufC NONE
        sufD NONE
        sufS NONE
        sufU NONE
        sufB  810845 ..  810862 + -14.1  -6.08342   CGGTTAATAGTAAAA             CCCCGCC ATAT GGCGGGG              TTTTTTTGTTTATTG 100 34
 LT978_04150 NONE
 LT978_04155  813922 ..  813941 + -11.4  -5.13648   TATAAATAAGAAAAA            CCGGAGCT TAAG GGCTCCGG             TTTTCTTTATGTTTA 100 32
 LT978_04170 NONE
 LT978_04175 NONE
 LT978_04180 NONE
 LT978_04185 NONE
 LT978_04190  820826 ..  820855 +  -5.1  -3.37487   ACATTTAACAGTTTC       GTATTAT-GGGTGG GCA CCACCTGATAGTGC       TGTTTCAAAATGTCA  54 234
        ugpC  822637 ..  822659 +  -9.8  -3.48822   CCGTATATTGAAAAA           GGGAGCCTGA TGA TGGGGCTCCC           TTATCACTTCTTATG  79 30
        allC NONE
 LT978_04215 NONE
 LT978_04220  827611 ..  827630 +   -15  -5.24003   GGATAAGAATCAAAA            GCCTCCGG GTAT CCGGAGGC             TTTTTGCTTTTTCTT 100 35
 LT978_04225  828697 ..  828720 + -16.8  -4.44548   TTCTGAATGTACTTA          GGATGCAGGG GGAC CCCTGCATCC           TTTTCATTGAGTATG 100 111
 LT978_04235  832495 ..  832518 + -15.4  -5.75599   TTCTGAAATAAAAGA          GCCGATTCTC TGAT GAGAATCGGC           TTTTTTTGTCGTTTG 100 13
 LT978_04240 NONE
 LT978_04245 NONE
 LT978_04250 NONE
 LT978_04255  836145 ..  836184 + -10.2  -5.10461   AAATAAAATACTATG  TCCCCTCTTACA-AGCATA CAT TGTGATATGTAAGGGGGGA  TTTTTCTTGCCTAGA  93 106
        yunB  836953 ..  836985 + -13.5  -4.35327   AAAGATAAATAAAAA      CACACAGCCGCAA TCTTTCC TGGCGGCTGTGTG      TTTACTTTTTCCTGC 100 29
        lipA  839078 ..  839100 +  -7.8  -5.31275   GATAAGCCGAAAAAA           CCCAAAAC GCCGCAG GTTTTGGG           TTTTTTGTGATGGAG 100 41
 LT978_04275 NONE
 LT978_04280 NONE
 LT978_04285  840824 ..  840844 +   -14  -4.01227   ACATCTATAAAAAAG            GGACGGCC ATGAC GGCCGTCC            TTATTCTGTATTTCT 100 31
        yutH  842713 ..  842727 +  -2.8  -3.37513   AAGAAAGGTGGAGTT               TCTCTT TGG AAGCGA               TTCGTATTGGACTGT  46 222
 LT978_04300 NONE
        thrC NONE
        thrB  846015 ..  846038 + -11.8  -5.35224   ATAATGATAAAAAAG          CGTTCTTCTC ATCA GAGAAGGACG           TTTTCTTTTTCTGGA 100 37
 LT978_04315  848095 ..  848115 + -13.3  -4.54821   GTAAAAATAAAAAAA            CCAGGCTGT CAT GCAGCCTGG            TTTTATGATTAAAAT 100 37
 LT978_04325  848871 ..  848892 + -14.5  -5.18726   GGGCTCTTAAAAATG           GCCGCTGAT CGCA ATCAGCGGC            TTTTTCTTATCAGCC 100 31
 LT978_04335  850476 ..  850495 +  -7.8   -5.4505   CCGATGTTTTAATCA            GAGGCTCC GAAC GGGGTCTC             TTTTTTATTGCGCCC 100 29
 LT978_04340  851831 ..  851862 + -20.4  -2.87132   TTATTTAGTAAACGA      TAAAAGCTCCCTGC ATAT GCAGGGAGCTTTTA       TGTATGAAAAACGGG 100 33
        dapF NONE
 LT978_04350  853340 ..  853370 + -15.6  -4.57341   ATCTGTTTAATAAAA       GCAAAACCCGCT CAACAGA AGCGGGTTTTGC       TTTTTCAAAGAGGTT 100 124
 LT978_04365  855440 ..  855456 +  -2.4  -3.64703   TATTTTCTTTAATTA              TTTTAT GGCGG ATAAAA              TTTAGCTCGGGAGAG  48 4
 LT978_04370  855883 ..  855913 +  -7.7  -2.87931   CGACCAATAAATAAT       TGCTCTTTTTGTA CAAGC TGCAAAAAGAGCC       TCTCTCCCAAATACA  62 44
 LT978_04375 NONE
 LT978_04380 NONE
 LT978_04385 NONE
 LT978_04390  859070 ..  859090 + -11.3  -6.56554   TATTTAATAAAAAAA            TGACATTCA ATA TGAATGTCA            TTTTTTTTTTATCTT 100 34
 LT978_04400  860471 ..  860497 + -11.6  -5.57729   TGTTTAAATAAAAAA         GAGTCTGTGCCG GTA TGACACAGACTC         TTTTTTATATTATTT 100 30
 LT978_04410  863033 ..  863056 + -15.4  -3.68435   AGTTTAAATTCTTCT          GAAAACCCGC AGCC GCGGGTTTTC           TCTTCTTTTAAAAAA 100 24
 LT978_04415  863358 ..  863395 +  -4.1  -2.77222   ACGTTGACTTTTTTA   CCGCCCCCGA-GGTAC ACTGAAA GTGCTGTAGGGGGTGG   ATGTTTGTGATTAGT  45 50
 LT978_04420  863726 ..  863745 +  -9.4  -5.71712   CAAATGTTTTAAGCC            GCTTTCTT ATTC AAGAAAGC             TTTTTTTGTGTCGCG 100 29
 LT978_04425  864467 ..  864488 + -14.5  -4.65895   GTAAAAGAATAAAAA           CGCTTCAGC ATCC GCTGAAGCG            TTTTTACATAAAGAA 100 29
 LT978_04435  866613 ..  866634 +   -13  -5.37593   GAAAGATAACAGCAT           CCCGCTGC CTTGAT GCAGCGGG            TTTTTTGATTTCCAA 100 32
 LT978_04440  868073 ..  868092 + -10.7  -5.00895   TGTTCTGTAAAAAAA            GGCTCCC GGAAAG GGGAGCC             TTTTTGTATGCTGAG  93 31
 LT978_04450  869429 ..  869450 +  -8.1  -5.71712   CTATATAGTTCTTAG           GTACCTTAT TAAA ATAAGGTGC            TTTTTTTATATCAAA 100 51
 LT978_04455  870520 ..  870539 +  -3.7  -2.53894   GTGTTTTGATTTGGA            TATGATT GTCTTG AATCATA             ATTGATAATGATAAT  44 97
 LT978_04460  871345 ..  871355 +  -3.2  -2.78327   TGATTTATGCGTTGA                 TGGC GGC GCTA                 CTTTAGGCGTTTGAT  44 1
        dhbC NONE
 LT978_04470 NONE
 LT978_04475 NONE
 LT978_04480 NONE
 LT978_04485  882562 ..  882583 +   -13  -4.83169   AATGTAATAAGAAAA           GCCTGCCG TTATTT CGGCAGGC            TTTTTATGCGGACAT 100 34
 LT978_04505  886486 ..  886517 +  -4.3    -4.128   ATGAATGAAGAAACG      GAGCGCCTGATTC AATCAA GAAGACGGCGCTC       TTTCTATGTAAGGGT  61 45
 LT978_04510 NONE
        essB NONE
        essC NONE
        esaA NONE
        essA NONE
 LT978_04535  897012 ..  897031 +  -9.3  -6.02919   CAAAGAATTTTTGTA            GAGCAGC TTTCAC GCTGCTC             TTTTTTTGTTTGTAC 100 25
 LT978_04540  897707 ..  897722 +    -6  -4.19953   AAGAAGCTCAGTCTA              GGCCAC TCAT GCGGCC               TTTTCCGCTTACATA  68 25
 LT978_04545  898206 ..  898216 +  -2.4  -3.65046   TTCACATGACAATAG                 GAGG AAA CCGC                 TTGTTGAAATCAAAG  48 150
 LT978_04550  899378 ..  899393 +  -3.2  -2.57463   AAAGAAAAGCGGAGG              TGTGGG TATG CCTGCA               ATTGTGGGACCGATT  43 80
 LT978_04555  899603 ..  899631 + -19.7  -5.34555   TGATTGGTTTAACGC        GTGACAGCCTCCT TTT AGGAGGCTGTCGC        TTTTTTGTAGTATAA 100 22
 LT978_04560  899943 ..  899960 +  -4.7  -2.82623   CGAAAACGGTTTACC             GCGTCCC GTCC GGGGCGA              TAATTGTAAAACAAG  50 41
 LT978_04565  900408 ..  900427 +  -3.6  -3.17723   AGGGCAAAACACTGT            TTGTCATT TTAC AATGCCAA             TTCACTTACAAGTGG  48 42
 LT978_04570 NONE
 LT978_04575  902535 ..  902557 +  -9.2  -5.58179   ATAGAAAACAAAGCG           GCCTTTCC TATCTCT GGAAAGGC           TTTTTTGTTGTGATA 100 37
 LT978_04580  904300 ..  904323 +  -3.1  -4.33907   TATGACATGCAAAAA          GACCACAAT GCGGGG GTTGCGGTC           TTTTCGGTGTTTGTC  60 452
 LT978_04590  904831 ..  904846 +  -7.6  -5.97575   AAAATTTCTTAAAAA              GACTTG GAAA CAAGTC               TTTTTTTTGTGCATT 100 29
 LT978_04595 NONE
        comX NONE
 LT978_04605  908419 ..  908438 + -12.2   -4.7373   TTTTATCACCAAATC            GACTTGGC AGAA GCCAAGTC             TTTTTAATAAAATGG 100 44
 LT978_04610 NONE
 LT978_04615  909532 ..  909566 + -11.6  -4.61231   TTATAACAAAATAAA     CAAACAGCCGGA ACCCTGAATCG TCCGGCTGTTTG     TTTTTACAAATATGA 100 27
 LT978_04655  915804 ..  915830 + -11.7   -4.9725   GTATATAGATGAAAA        GAGTTCCGGCAC CAGG GTGC-GGAACTC         TTTTTGTGTGGCAAT 100 29
 LT978_04690  924007 ..  924034 + -17.2  -5.06414   TTTATAATAGCATAA        TGGCTAGCTTAC CTGT GTAAGCTAGCCA         TTTTTGTTAAGACAG 100 6
        kapD  928550 ..  928564 +  -4.2  -3.34398   GCCCATTCTGAGCCG               TCCGCT GTA AGCTGA               TCTTTCAGCCGGGCA  50 123
 LT978_04730  931831 ..  931846 + -11.8  -6.11243   TGCACCCCTTAAAAA              CCGGCG GTTC CGCCGG               TTTTTTTTATTGAAT 100 29
 LT978_04740  933318 ..  933341 +  -2.4  -4.18983   CAAAAGAATCGTGGT          GTCTCCGT AAATGGAA ACGAAGAC           TTCTTATTTATCTGA  54 16
 LT978_04745  934535 ..  934575 +    -4  -4.06491   CATCCAAATAAAAGG GGGGGAATACTA-GAAAGC CTTC GTAATCATAGTATACCCCC  TTTATCTGCGCTTAA  59 63
        yugI  935099 ..  935122 +  -9.6  -5.90231   TAACCATCAAAAAAA          GCACCGGATA TGTA TGTTCGGTGC           TTTTTTTATGTTTAT 100 38
 LT978_04760  936776 ..  936798 +    -9  -5.80248   GTAATAACATAAAGG           GGGGCGGCCG GAT TGGCAGCTCC           TTTTTTTCTGTGTTA 100 37
 LT978_04765  938242 ..  938284 + -13.6  -4.57353   ATGAAGAGCCGCGAA TTTAAAAAAGGGGCGCTGAT TCA ATCAGCGCTCCTTTTATGCA TTTTGTGTACTAAGG 100 243
 LT978_04780  941371 ..  941398 + -12.8  -5.02074   AAAAATAAAAAGAAG        GGCTGGCCC-TCA GCA TGACGGGTCAGCC        TTTTTTAAACCGTGA 100 33
 LT978_04785 NONE
 LT978_04790  942251 ..  942278 +  -4.8   -4.9725   GCACCTGGTATGACA        GGGGAGGGGT AAGCATCG GCCCCTCTTC         TTTTTGTATGCCGAT  77 66
 LT978_04805 NONE
 LT978_04810  944580 ..  944601 + -12.3  -5.69379   CACGAAGGAGGTGGC           CCCTTACCG TTTG CGGTAGGGG            TTTTTTTGCTTATAT 100 41
 LT978_04815  945897 ..  945919 +  -4.1  -5.60993   AAAACAGATTTCTGA          GCCTC-CTGC TTTT GCAATGAGGC           TTTTTTTATGGAAAA  83 26
 LT978_04820  947650 ..  947669 +  -8.6  -5.34555   ATATATGGTGAAAAA            CTTCAGTC CCGA GGCTGAAG             TTTTTTGTGATCTGC 100 30
 LT978_04825 NONE
 LT978_04830 NONE
 LT978_04835  949472 ..  949500 + -10.4  -4.26327   GAAAAGCATTTCACA        TCCCATCGTC ACAATGACA GACGATGGGA        TTGTTTTAATGCATG  87 9
 LT978_04845  952378 ..  952403 + -15.5  -5.31275   TCAACTAGTAAAAAA         GGACGCTTTCC AGGT GGAAGGCGTCC          TTTTTTATAGTGACA 100 33
 LT978_04850  954545 ..  954561 +  -3.7  -4.14739   AGATAAACTCTTAAT              TAAGTCT AAA AGACTAA              TTTTGCAATAGGTAA  59 27
 LT978_04855  956669 ..  956691 +  -9.2  -6.11019   TAATAGATCATAGAA           CACCCAAATG TGC TGTTTGGGTG           TTTTTTTTAGTTTTT 100 38
 LT978_04860  958770 ..  958785 +  -4.7  -4.73614   TCTGAAGACGAAGAA              CAGCT GTAACG AGCTG               TTTCTTTTCCTCATC  72 17
 LT978_04865  959373 ..  959396 + -18.2   -5.1166   CGTCCAAATAAAAAA          CATCCGCCCG AATC CGGGCGGATG           TTTTTAGTTTTGATC 100 30
 LT978_04875  961756 ..  961785 +  -7.9  -4.43844   TGATATTTATTATAA       GACAGGCTTTCCT TCAA AGGAGAGCTTCTC        TTTTGTAAATGATGA  80 55
 LT978_04880  962654 ..  962674 +  -4.6   -5.0916   CGTGCGATAAACGAA            GAGGCCCC CCGGA GGGTCTTC            TTTTTATGTTCGAAA  75 31
 LT978_04885  962860 ..  962876 +  -9.5  -6.02919   CTCCATACCTTTAAA              CCCTTAT TCT ATAAGGG              TTTTTTTGTTTGTCA 100 34
 LT978_04900  965582 ..  965601 + -10.8  -5.46129   ACTTGAACAGCTTAA            GCCTTTTC TTCG GAAAAGGC             TTTTTTCCTTTCTTC 100 295
 LT978_04910  966900 ..  966923 + -13.9   -4.0641   GACCGTAATGATCAA          GAGCCCCTC TGCAAT GAGGGGCTC           TTTCTGTCGATGCGG 100 33
        hmpA  968988 ..  969006 + -13.2  -5.63517   GGCATAACAAAAAAA             GACTCCTC AAA GAGGAGTC             TTTTTTATTTGCACG 100 34
 LT978_04925  969980 ..  969996 + -13.7  -5.54192   TAAGCATCAAAAAAA              GCCGGCA GCT TGCCGGC              TTTTTTTACATTCCT 100 38
        betB NONE
        gbsB  974995 ..  975017 +   -12  -5.03715   GGTATAATAAATGAA           CCCCGCTC CTTTACA GAGCGGGG           TTTTTTAAGGATAAT 100 34
 LT978_04955  975626 ..  975654 + -16.9  -5.74086   GCGCCAAGAAAAAAA        TTGAGAAGGTCTG ACT CAGACCTTCTCGA        TTTTTTGTTTGATTT 100 12
 LT978_04965 NONE
 LT978_04970  978360 ..  978382 + -14.9  -3.78329   GCCCGGAATAAAAAA           CAGCAGGCG TAAAC CGCCTGCTG           TTTCAGTTCGTCCGC 100 30
 LT978_04980  981300 ..  981310 +  -5.4  -4.42235   TAGTAATGCAAGATA                 TCAC GTA GTGA                 TTCTTTTTAACGGTT  69 179
 LT978_04985  984281 ..  984298 +  -8.5  -2.96873   TACTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TGGTTTGGTGGCGAT  67 55
         rrf NONE
 LT978_04995 NONE
 LT978_05000  984632 ..  984644 +  -3.5  -2.51872   CACCACTTTTATATG                TTATA CTA TATAA                GTCTCTTGTAATAAG  43 36
 LT978_05005 NONE
 LT978_05010  984818 ..  984847 +  -4.9  -3.09516   TGGGGGTTCAAGTCC       CTTCATCCGCATT GCCA AACGCGGAAGTAG        TTCAGTGGTAGAACA  52 15
 LT978_05015 NONE
 LT978_05020  985007 ..  985018 +  -2.2   -3.9461   TGCCGGTTCAAGTCC                G-GCC CTC GGCAC                TTATTGTTGCGCCCG  52 15
 LT978_05025 NONE
 LT978_05030 NONE
 LT978_05035 NONE
 LT978_05040 NONE
 LT978_05045 NONE
 LT978_05050 NONE
 LT978_05055 NONE
 LT978_05060 NONE
 LT978_05065 NONE
 LT978_05070 NONE
 LT978_05075 NONE
 LT978_05080 NONE
 LT978_05085 NONE
 LT978_05090  986238 ..  986250 +  -3.3   -2.8294   GTGTAAGCGGCGCGA                GGGTT CAA ATCCC                TCCTTCTCCGCCATA  44 0
 LT978_05095  986348 ..  986366 + -11.8  -5.56673   GGGTCATTAAAAAAA             CCTTGCAT AGT ATGCAAGG             TTTTTTATTATGCGT 100 32
 LT978_05110 NONE
        menD NONE
        menH NONE
        menB  992865 ..  992891 +  -9.4  -5.07652   GATGACACTACGAAA         CAGCTTGAGCCG CTC TGGTCCAAGCTG         TTTTCTTTTCAAAAA  91 44
 LT978_05130 NONE
        menC  995594 ..  995610 + -13.7  -5.52384   CTTCCCCCGTTTGAA              CCGGCTG TAT CAGCCGG              TTTTTTTAATAGGCG 100 110
 LT978_05155  998937 ..  998964 + -13.6  -4.17132   TACAATATGGGGAAA        TAAGACAAGCCC AATA GGGTTTGTCTTA         TTTATTGAGCACTTT 100 23
 LT978_05160  999726 ..  999743 +  -5.5  -3.19668   TCCGCCTTTTAATGC             GCCGTGA GTCT TGACGGC              TTCGATTCCGTACTG  52 124
 LT978_05170 1000457 .. 1000482 +   -12  -5.18561   TCGGATAAAAAACAG         GCCTTTTTGC TGACAT GCAAAAAGGC          TTTTTTACATATTTC 100 33
 LT978_05175 1001058 .. 1001070 +  -3.4   -3.3676   CTCCGGCGGGTCAAT                CGTA TGTTT TACG                TTATAAGCTCTTACA  48 76
 LT978_05185 1001728 .. 1001752 +  -5.7  -4.90778   TAATCAACAAGGGAA         GACCGGG-GC CATAAA GCACTCGGTC          TTTTATTTGGCTGCC  76 38
 LT978_05190 1002277 .. 1002290 +  -4.5  -2.78935   CAAACCGTAACATTT               GCTTC AAAG GAGGC                TATACTAGCGGGTAT  48 31
        ytkD 1002892 .. 1002914 + -11.3  -5.69068   ATCATAAAAAACGGA          GACCCG-GCG CTTA CGCACGGGTC           TTTTTTATATTTTTC 100 34
 LT978_05215 1006457 .. 1006472 +  -2.6  -4.11692   TAAAGAATAAGAGAA              TGAAAG GGGA TTTTCA               TTTTGGGAATGCCTG  55 65
 LT978_05220 1006728 .. 1006751 + -11.7  -5.26875   ACTGAAAAAACAAAA          GCCGAGGGC ATAAAC GCCCTTGGC           TTTTTTGATTACACG 100 36
        metK 1010060 .. 1010077 + -11.3  -4.03085   GAGAATAATTTTATA             GCCGCTT ACTT AAGCGGC              TTTCCCTTTTTGTAG  86 33
        asnB 1012102 .. 1012123 + -13.1  -5.57729   TCGTTTAATCCAAAA           GGCTTTCGA GTTA TCGAAAGCC            TTTTTTCTATTGTTT 100 33
        alaP 1013706 .. 1013725 +  -7.1  -5.15634   AAAAGCGTAAAAAAA            GAGCCCG CTGAAA TGGGCTC             TTTTTTCATAGGATC  85 31
 LT978_05250 NONE
 LT978_05255 1016326 .. 1016357 +  -7.3  -5.73978   TTCGTAATGGGTGAA      CTGCGCCTCTCGTG TACAT CATGAC-GGCGCAG      TTTTTTATTTATGAT 100 34
 LT978_05260 1017236 .. 1017261 +  -6.9   -5.4477   AACAGTAAATAAAAA         GAGACATGCGCA TTT TACGC-TGTCTC         TTTTTTTAACGGTTT  91 29
 LT978_05280 1019651 .. 1019670 + -12.8  -5.90231   AAATGGTTCAGCAAA            CCTGCCGG AATC CCGGCGGG             TTTTTTTGTATTTCT 100 53
 LT978_05285 NONE
        ytrA NONE
 LT978_05295 NONE
 LT978_05300 NONE
 LT978_05305 1023288 .. 1023307 + -11.4  -2.71011   TTATAAAGAATGGAA            GCAGCGGC AGAC GCTGCTGC             TGCTTACAGCGGGGT  81 97
 LT978_05315 NONE
 LT978_05320 1026260 .. 1026278 + -12.4  -4.86133   TGTAAAGGAAAAAAG             CCGGCTGG ACA TCAGCCGG             TTTTTCCTCTATCTA 100 36
 LT978_05325 NONE
 LT978_05330 1027998 .. 1028021 + -11.8  -4.98103   CCGTCAGCATGTTCA          GCGTGTGACA AAAG TGTCACATGC           TTTTCTCTTTTGTTC 100 18
 LT978_05335 NONE
 LT978_05340 1030814 .. 1030833 +   -15  -5.72616   AAAACAAGTTGAGGA            GCCTCCGC ATAA GCGGAGGC             TTTTTTTGTATGAAT 100 39
 LT978_05345 1031751 .. 1031774 +  -7.4  -5.16237   ATAACGTGATCGATA          CGGAG-CCGCG GCT TGCGGTTTCCG          TTTTTTCATGGGGTT  85 158
 LT978_05350 1033002 .. 1033037 +   -15  -3.85698   CAAGTGCGATGACGA    CATAAAAAATCCCGCTG TTT CGGCGGGATTTTTT-TG    TTTATACGACCGGAA 100 29
 LT978_05360 1034850 .. 1034878 + -10.3  -6.07969   CCGCGGGAAACAAAA        ATCTCTCGTCCCT TTT AGGGATGAGGGAG        TTTTTTTTAGTTTTA 100 326
        leuS 1037399 .. 1037421 + -14.9  -5.24531   AACTGACCGGACGAA           GCCCCTCTC CTACA GAGAGGGGC           TTTTTTATCAGGCCT 100 35
 LT978_05370 1037833 .. 1037861 +  -6.2  -5.60993   CGCTTTGAAGTGAAA       GAAGAAAAGGGAC GTGC GTCT-TTTTCTTC        TTTTTTTATAAAAAA  89 41
 LT978_05375 1038426 .. 1038436 +  -8.2  -3.55191   ATGATCAGTGATAAG                 CCGG AAG CCGG                 TCTTTGTGCGCTTCA  73 73
 LT978_05405 1044197 .. 1044216 +  -8.6   -5.3236   ACCGAAAATAAAAAA            GCCCGG-AT GAA ATACCGGGC            TTTTTTATGCATTAT 100 30
 LT978_05420 1049063 .. 1049079 +  -7.2  -5.26119   GAGAAATAATGAATA              GTCCGC TTATC GCGGGC              TTTTCTTTTTAAAGG  91 39
 LT978_05425 1049840 .. 1049863 +   -14  -4.96848   ATCGATATCAGAAAA          GCCCAAAACA GATT TGTTTTGGGC           TTTTTATATAGAGGA 100 40
 LT978_05435 NONE
 LT978_05440 1052322 .. 1052344 + -12.1  -5.16841   CTTTATATGTAAAAA           TCCCTTTCC GAAAA GGAAAGGGA           TTTTTCTTAATGTCC 100 29
        pepV 1055152 .. 1055173 + -11.5  -4.98255   AAGTGATAATAAAAA           GGGACGCCG AAAG CGGCATCCC            TTTTTATCATTCAAA 100 35
        thpR NONE
 LT978_05465 NONE
 LT978_05470 1058855 .. 1058894 +  -2.3  -5.58179   CGCTAAAATTTATAG  GACGGCTATTGATTAG CATATGAGA CTC-TCAATAGCTGTC  TTTTTTATTCTCATG  79 153
 LT978_05475 1060174 .. 1060204 + -13.2  -3.78193   AGCCTCTTTTTTTAT       GCGGCCGGCGCCTT TAA AAGGCGCTTGCGGC       TCTTTATGTTTCATG 100 403
        trmB 1060905 .. 1060926 +  -6.6  -5.60993   ATGGAGAACAAAAGA           CAGACTCT GATGCG GGAGTCTG            TTTTTTTATGCCGCC  90 16
 LT978_05490 NONE
 LT978_05495 1063600 .. 1063632 + -13.7  -5.32944   GCCGATGTAACCGAA      TAAAGCCCAAAAC GCTGATG GTTTTGGGCTTTA      TTTTTTGCTTGTCCG 100 31
 LT978_05505 1065580 .. 1065609 +   -13  -3.82946   AGTGGTGAGTGTAGG       TAAGCAGGACCGC AAAAA GCGG-CCTGCTTA       TTCTGTTTCAAATAA  95 406
 LT978_05515 NONE
 LT978_05520 1067399 .. 1067411 +  -2.7   -3.3341   GCCGAAAAAGGATTA                GAAAG GAT TTTTC                TTATGAACGCTTTTT  46 25
 LT978_05525 1068058 .. 1068091 + -21.3  -3.17571   TCGAATGATGTGAGA     GAAAGCCGTTAAGCA GGCC TGCTTAACGGCTTTC      TTCAGTTGGGAGCTT 100 64
 LT978_05530 1070934 .. 1070949 +  -6.8  -4.08767   TAAAAATAAATGGAA              GCGCCGC TGT GCGG-GC              TTTTCGCCCGCTGCG  71 172
        murC 1072334 .. 1072352 +   -11  -5.03715   TAGCGTAACGAAAAA             GCAGTGGG GCT CTCACTGC             TTTTTTGCGCGTGCT  93 33
 LT978_05540 NONE
 LT978_05545 NONE
        ytxJ 1073710 .. 1073729 +   -15  -6.06723   TTTCATAATTGCTGG            CCGCCGGT TGAT ACCGGCGG             TTTTTTTTTGAAAAA 100 33
 LT978_05555 1075037 .. 1075051 +  -8.5  -5.92337   TTCCGCTCTTTAAAG               GCCGC CTCGC GCGGC               TTTTTTTTCGTATCT 100 48
        ccpA 1076311 .. 1076341 +  -5.5  -5.28481   TAAAAAAACGGAAAA      GCAAGCTT-CACTC TGAG GGGTGGAATCTTGC       TTTTTTACTTGAGTA  81 38
        motP NONE
        motB 1077841 .. 1077873 +  -7.9  -5.18371   GTAGAAATTGTGATC      AAAAAAACGACCT CCTCATA AGGTCGTTTTTTA      TTTTGTTTTATACCG 100 5
        acsA 1082489 .. 1082515 + -17.4  -5.83211   GTACCGCGATTATAT         CGTCCCTTCGTT TTA AACGAAGGGGCG         TTTTTTATTTTCATA 100 302
        tyrS 1083824 .. 1083853 + -11.4  -5.65678   TACTGAAAATAAAAA       GCAGTCCGGCCGC TCAAT GCGGCAGG-CTGC       TTTTTTATGTTTTGT 100 35
 LT978_05615 1087162 .. 1087179 +  -9.1  -5.24796   AAAATGCCTGCAAAA             GGCCCGT TTCC ACGGGTC              TTTTTGTTGTATAAA 100 71
 LT978_05620 1087704 .. 1087745 +  -8.8  -5.36441   CGGTATCATCATCTG CGGACACTGAACTGACAAC ATGGC GCTGTTTGTTC-GTGTCCG TTTTTTATGTCAAAA 100 110
 LT978_05625 1088805 .. 1088829 + -10.8  -5.14645   CAATCCATAAAAAAA          TGCACAGACT GAACG GGTCTGTGCA          TTTTTATTCGCTTAT  93 280
        hmpA 1091195 .. 1091211 + -13.7  -5.88565   ATTTTAATGTATGAA              GCACCCG GAT CGGGTGC              TTTTTTTATTCTAGA 100 61
 LT978_05650 1092579 .. 1092604 +  -3.1  -5.59879   ATTATGGTAAAGGAA         GCGGCACTGCT GATG AGCGGGGTCCC          TTTTTTATATTTCTC  81 107
 LT978_05655 1094389 .. 1094410 + -15.9  -5.45802   TGAAATTATATTAGG           CGCCTTCCC AAAC GGGAAGGCG            TTTTTATTTTAGGGA 100 95
 LT978_05670 1096540 .. 1096556 + -12.3  -5.65927   GAGGATTTATAAAAA              GCGCAGA TAC TCTGCGC              TTTTTTATTTAAGTA 100 29
 LT978_05685 1100918 .. 1100942 + -13.6  -5.67967   CGACGACATAAAAAA         GGAG-CCGGCC TGCC GGCCGGGCTCC          TTTTTTTATCCTAAT 100 30
        refZ 1102238 .. 1102253 +  -3.2  -4.31485   TTGATGGGCGTCCGA              CCCG AATATGAG CGGG               ATTTTTTTTTGCTTC  63 84
        ezrA 1104884 .. 1104912 + -12.6  -6.02919   ACGCACAAGCCAAAA       CTGCACC-CTGAT GGAA ATCAGAGGTGCAG        TTTTTTTGTTTCTCA 100 41
 LT978_05715 NONE
        thiI 1108910 .. 1108923 +  -2.4  -3.54475   TTTTGAATGAAGACA               TGTG TTTTAT CACA                TTCTATACTCACAAG  46 65
 LT978_05725 1109198 .. 1109217 +   -15  -5.17353   ACATAATGGCTAAGA            GAGCGGGG AATT CCCCGCTC             TTTTTTCATGAGTAT 100 51
 LT978_05730 NONE
 LT978_05735 1112512 .. 1112537 + -13.3  -5.67063   ATCGTATATGAAAAA         GAGGACAGGCA GTGA TGCCCGTCCTC          TTTTTTTATGATAAA 100 11
        sppA NONE
 LT978_05750 1115050 .. 1115075 + -12.7  -6.07969   CGCAAATAAATGCAG         TAAACCCGGAT TAAC GTCCGGGTTTA          TTTTTTTTGGTTTTG 100 32
 LT978_05755 NONE
        ytfJ 1116270 .. 1116292 +  -8.5  -5.44119   ATTTATAACAGAAAA           GTTAACTGC CGCCC GCAGTTAGC           TTTTTTTACGATGCG 100 33
         tpx 1116893 .. 1116918 + -11.9  -4.25104   GTAAAGAGGGGAAAA         GAGCTCCG-GGT GCT GCCGCGGAGCTC         TTTTCATGGCAAGGA  95 37
 LT978_05770 1117932 .. 1117975 +  -5.5  -4.62783   AAAAGAAAAATAATG GCGAAAAAGCAGTGTGAGA CGCAAAAT TC-CGCGCTGCT-TTTCGC TTTTTAAAATGAATG  72 28
 LT978_05775 1119441 .. 1119460 +   -10   -5.4833   TAATGAGCGAAAAAA            GCACATCC TTTA GGGTGTGC             TTTTTTATTGAATGC 100 38
 LT978_05780 1120059 .. 1120082 +  -7.4  -5.93809   TATAAAAAGGCTCTG          CTCCGCTCAA AAAA TTGGGTGGGG           TTTTTTTTATAAAAG 100 44
 LT978_05785 NONE
        argH 1122980 .. 1122997 +  -7.7  -5.86061   CCTTCAGAAAATTAA             GCTGTCT GTAA AGACGGC              TTTTTTTTCGTGCGG 100 229
 LT978_05795 1123866 .. 1123881 +  -3.2  -2.96808   GCTGAATGTGATTAA              CAGGCA TCAA TCCCTG               TAAGTTTTTTCGTTT  45 7
 LT978_05800 1124645 .. 1124673 + -14.8  -5.31275   GACATATGTGTCGAA        GACCTTCTGAAT CAAGC ATTCAGAAGGTC        TTTTTTGTGATGCCG 100 39
 LT978_05805 1126083 .. 1126110 +  -8.4  -2.67245   AGCTGATGGAGAGAA        GTTAAGGGACGC ACCC GGGTCCCTTGGC         ATTCATTATGCGTGG  65 21
 LT978_05815 1127476 .. 1127489 +  -8.1  -4.33755   TAACGAACACAAGTA               GAGGG GAGA CCCTC                TTTCTTAGTGTTCAT  82 25
        dnaE 1132139 .. 1132153 +  -7.2   -2.8341   AATCGTTTTGTTATA               CAATTG AAA CAATTG               TGCTATCTTATTTAA  60 51
 LT978_05840 1133504 .. 1133532 + -16.1  -3.12327   CACAAAAATGAAATG        GCAGCGCGTTG GAAAAAA CAACGCGCTGC        TGTTCAATATACGGA 100 44
        accD NONE
        accA 1135649 .. 1135676 +   -10  -5.47914   TCGGGGTAAACTGAA        TAGACGTGAAGCC TAT GGCT-CACGTTTA        TTTTTTGTGATTTTT 100 27
        pfkA NONE
         pyk 1138609 .. 1138630 +  -8.7  -4.81359   AACAGCTTTAAAAAA           GAGAGGGGG GTTC TCCCTTCTC            TTTTGTCTTTAGGTT  88 40
        fxsA 1139093 .. 1139117 +   -10  -5.33026   TTATCAAATAAAAAA          CGGCAGCCTT CTTAC AGGGCTGCTG          TTTTTATTTGGATTG 100 30
 LT978_05875 1140808 .. 1140822 +  -4.9  -5.76949   TCATAAAGTAAAAAA               GCGGC GTAAA GCTGC               TTTTTTTTGCGGGTG  93 35
 LT978_05885 1141720 .. 1141740 +  -9.7  -4.95896   GAAGCAGAAATCGAG            CCCTTCTCG AGA TGAGGAGGG            TTTTTCTGCATTTAT  93 114
        citZ 1143581 .. 1143612 +  -6.9  -4.45083   AATCTTGAGAAAAGT      CATTTTATTTTTT ATACAA GAAAAATAAAATG       TTTTCTAAATATGAA  78 117
         icd NONE
         mdh 1145913 .. 1145942 + -11.5  -4.67904   TGTCATAAGAAAAAA       G-GGAAGGCTTCCG AAT CAGAAGCCTTCCTC       TTTTTACAATTAATG 100 33
 LT978_05910 NONE
 LT978_05915 1148669 .. 1148697 +  -7.4   -5.2696   GGAGCCAATTTTGAC       GG-CGGGAACGCG TTTT CTTGTTCCCGTCC        TTTTTTGCGTTTTCA  91 122
        polA NONE
        mutM NONE
        ytaF 1153093 .. 1153103 +  -3.2  -3.23984   TATAAGAAGGAGTGG                 GCTT TTT GAGC                 TTGGTCATCGGTTTA  48 36
        coaE 1153697 .. 1153720 + -16.8  -4.98255   CTGGGCATAAACAAA          CACCGTTCGG AAAG CCGAACGGTG           TTTTTCTGGTTAAAA 100 31
 LT978_05950 1156425 .. 1156435 +  -2.4  -5.60993   CAGGCAGCCTGAGAC                 GCTG ATC CTGC                 TTTTTTTATGGAAGA  79 49
 LT978_05955 1157810 .. 1157820 +  -3.2  -2.58579   TTCCCCCGTGGTAAA                 TGGC CGG GTCA                 GTTCTCGGAAATTCA  43 204
        speD 1158342 .. 1158358 +  -2.3  -5.94713   GTAAAAAAACAGCAT              TGCTT TTTCTTT AAGCA              TTTTTTTTGTAAAAT  90 117
        nrdR NONE
 LT978_05970 NONE
        dnaI NONE
 LT978_05980 NONE
        ytxC 1163354 .. 1163379 + -11.1  -5.00138   ATTCCGTTTATTTAA         CCTCGTCCCTT TCAT AGGGGGCGGGG          TTTTTGATTTGCATA  93 375
        thrS 1165361 .. 1165381 +    -9  -5.50499   CGGAAATACAAAAAA            CCCCGTTC ATTCA GAATGGGG            TTTTTTTGCGTATAA 100 42
 LT978_06000 NONE
 LT978_06005 1168855 .. 1168879 + -11.5  -2.90349   CAAGGACTTAAAAAA          GCTGCTTCATA TTA TATGAGGCGGC          ATTTGCATTTCAGCA  82 7
        lrgA NONE
        lrgB 1170141 .. 1170159 +   -16  -5.64304   TCATCGGAGGATAAA             CCCGGGTC ATA GACCCGGG             TTTTTTATTGTGTTG 100 27
        infC NONE
        rpmI NONE
        rplT 1171646 .. 1171666 + -10.4  -5.47218   AGTAAGTTGAAAAAG            CCGCTCTC TTTCC GGGAGCGG            TTTTTTTACGTAAAG 100 36
 LT978_06035 1171963 .. 1171987 + -11.4  -5.32608   TATAAAAAATAAAAA          GCAGGAGAGC TTATC GCTCGCCTGC          TTTTTTCGCTTTTTT 100 29
 LT978_06045 1173645 .. 1173668 + -12.6  -6.06529   AATAAAGATACGGAA          GAATCTGCTT TTTT AAGCAGATTC           TTTTTTTTGTCTGTA 100 36
 LT978_06050 1174750 .. 1174769 + -11.4  -5.27477   CCTATTAATTGATCA            GCCGGGCA TGTG TGTCCGGC             TTTTTTACTTGCAAT 100 33
        araA NONE
        araB NONE
        araD NONE
 LT978_06070 NONE
 LT978_06075 NONE
 LT978_06080 NONE
 LT978_06085 NONE
 LT978_06090 NONE
 LT978_06095 1185448 .. 1185459 +  -7.2  -5.75342   CCGAAAAGCCGGGCT                GCCG CTGC CGGC                 TTTTTTTTACGCAAA 100 45
        cstA 1187373 .. 1187397 + -10.8  -3.69354   TGCAGCATCATAAAA         GCAGAGAG-CC GATC GGTCTCTCTGC          TTTCGGCTTATGACA  83 62
 LT978_06125 1192747 .. 1192771 +   -10  -6.14618   GTACCGCGGCCACAA          CTCGTCCCTT CTCTC AAGGGGCGGG          TTTTTTTGTTTTCTG 100 302
        pheS NONE
        pheT 1196302 .. 1196323 + -13.1  -5.88565   GAGGATAAAGAAAAA           GCTTGCAGA TCAT TCTGCAAGC            TTTTTTTATTATGAC 100 33
        zapA NONE
 LT978_06150 1198210 .. 1198228 +  -5.3  -5.42862   ACGGGGCATAAAAAA             CTTCTCT TGACC GGAGAAG             TTTTTTTCAAGCTCT  83 30
        polX NONE
 LT978_06160 NONE
 LT978_06165 1202932 .. 1202956 + -12.9  -5.45652   TTAATACTGAAAAAA          GGCTGCCGA ACTCAAA TCGGCAGCC          TTTTTTATTGAGAAT 100 135
 LT978_06175 1205478 .. 1205495 +  -7.1  -3.85698   TTTATCATGAAGTTA             TGAATGA ATAG TCATTCA              TTTATCGAAGGAAGG  70 71
 LT978_06180 NONE
 LT978_06185 NONE
 LT978_06190 NONE
 LT978_06195 1208695 .. 1208730 + -14.9  -4.28323   AATATTCATTCATAA    TCAAAACCCTCTGGC TTATTT GTCAGAGGGTTTTGG     TTTGTGTTAATTAGT 100 26
 LT978_06200 NONE
        trxA 1210884 .. 1210909 + -14.1  -5.27779   CTTCCGTTACGGCAG         GGCGATTCCTT TGAA AGGGAATCGCC          TTTTTTGATCTTCCA 100 49
        uvrC 1213045 .. 1213070 +   -12  -5.88565   GTACTGATATGAAAA         GCAATGAGAG CTATTC CTCTCATTGC          TTTTTTTATTGTGGA 100 295
 LT978_06215 1214386 .. 1214408 +  -9.9  -4.78149   ACGGGCAGGCAAAAA          GGCGG-GACT TTTG AGTCACCGCC           TTTTTCAATTATACA  91 41
        sdhC 1215748 .. 1215758 +  -3.2  -3.01726   TACGTAGGTTTAAAA                 GCGA TTT TTGC                 GTTTGTGTAAGAGAA  45 5
        sdhA NONE
        sdhB 1218339 .. 1218358 +   -10  -5.60993   GAAAGAGAAAAAGAG            CCTCTTCC GCAC GGGAGAGG             TTTTTTTATAAGGAG 100 41
 LT978_06240 NONE
        gerE 1219172 .. 1219202 +  -4.1   -4.0098   GAGCTCTGATTCTTG      CCGGTTTTCCTTCTT TAC GAGAAGG-AG-CCGG      TTATTTGCGTTGGCG  57 32
 LT978_06250 NONE
        racE 1220630 .. 1220647 + -12.7  -5.47399   ATAAATCAAAAAAAC             CCCGCTG TTTA CAGCGGG              TTTTTTTGCGCTTCC 100 37
 LT978_06260 NONE
         rph NONE
 LT978_06270 NONE
 LT978_06275 1223792 .. 1223829 +  -4.8  -4.57837   ACAATCAGTTTTTAA   CAAGTGATGGGGGAGA TTTCAT TCTTCCCCATCAAAAG    TTTTTAAAAAAATAT  70 26
 LT978_06280 1224017 .. 1224027 +  -2.4  -5.26316   CAGAGTGAAAACTGA                 TGCC GCT GGCC                 TTTTTTATCGGATGA  72 63
 LT978_06285 1224184 .. 1224210 + -10.2   -5.9362   GGGACGTATAAAAAA         CCTCAAGCCC TGACAAT GGGTTTGAGG         TTTTTTTGTATTTTA 100 34
 LT978_06290 1224624 .. 1224641 +    -4  -5.02502   GAATAAGAAAAGAAA             CCGGCC GTGTGA GACCGG              TTTTTGTATCATCTG  73 39
        ilvB NONE
        ilvN NONE
        ilvC NONE
 LT978_06315 NONE
        leuB 1231746 .. 1231761 +  -7.6   -2.5507   AAATCTATAGTATGA              CGCTTT AAAG AAAGCG               GTCTTAGTTCAATAG  61 26
        leuC NONE
        leuD 1233835 .. 1233858 + -11.6  -5.45726   TCAAGCCTGAAAAAA          GCCGCCCGGC ATCT GTCCGGCGGC           TTTTTTTACCGTGTG 100 31
        ddcA 1235045 .. 1235063 +  -5.2  -3.11955   AATGAGAATTACGGT             TGGACAGG CTG CCAGTTCA             TTACATAATGATTCT  52 118
         tig 1236473 .. 1236497 +   -10  -4.43859   ATAGACATAATAAAA          CAGGGCGCGA TTAAT TCGTGCCTTG          TTTTGTACAATTATG  89 55
        clpX 1237988 .. 1238013 +  -6.2  -6.17268   CATAACACGACAAAA         CCTCCTGA CCCGAATTAA TCAGGAGG          TTTTTTTTCTTGTCC 100 36
        lonB 1239788 .. 1239806 +  -8.9  -5.60993   AAGAATCCGTATAAA             CCCCATT TTTAT AATGGGG             TTTTTTTATGGAGGA 100 27
         lon NONE
        yihA 1242897 .. 1242929 + -16.5  -2.77512   GATCAGCCGGTAATG      AAAAACCCAAAACGC AGT GCGTTTTGGGTTTTA      TCGTATAGTTTTGTT 100 28
        hemA NONE
 LT978_06375 NONE
        hemC NONE
 LT978_06385 NONE
        hemB NONE
        hemL 1249871 .. 1249897 + -13.1  -5.14477   CGCTGATACCGAAAA         GCCGATGCAAG CAAGA CTTGTATCGGC         TTTTTTCAATGTCTC 100 35
 LT978_06400 NONE
        ysxE 1252939 .. 1252963 +  -9.3  -5.72616   AATAAAAGCGGAAAA          CGAGTCCTCTT CAT AACGGGACTCG          TTTTTTTATATCCAT 100 10
 LT978_06415 1256267 .. 1256288 + -14.5  -3.46602   CTGATAAAACAGCGG           GGCGGTTTC CTAA GAAACCGCC            TTGTCGTATAAAAGA 100 37
 LT978_06420 1257619 .. 1257652 +  -5.3  -4.91109   TGACAGCCCCTCGGA     TGCCCGGC-AGACC ATTTTCC GGTTTTGCCGGGTG     TTTTTATGCTGAAAA  76 38
 LT978_06425 1258520 .. 1258544 +  -6.5   -6.3578   TGGCGAACGTTTTTT          GGACAAGAC GACAAAA GTCTTGTTC          TTTTTTTTTTCGCCT 100 47
 LT978_06430 1259636 .. 1259653 +  -9.1  -5.86976   AAATAGTATCTCATT             TCCCGTC ATCC GGCGGGA              TTTTTTATTTTGTCA 100 35
 LT978_06435 NONE
        radC 1261110 .. 1261123 +  -2.3  -4.98531   AGATTTTATGAGTTT               TTCCC TTTA GGGTA                TTTTTGCTTTAAGAA  66 72
        mreB NONE
        mreC 1263046 .. 1263078 +  -9.1  -4.06805   GAAGCGTAGCAACAG      GGGAGGAAGGATCGT GAA ACGTTTCCTTCTCCC      TTTGATTATGATTTT  79 9
        mreD 1263575 .. 1263588 +  -2.5  -4.34482   GAATTAAGAGATGAG               TAAAA AGGA TTTTA                TCTTTTTTTGACGAA  58 23
        minC NONE
        minD 1265136 .. 1265163 +  -8.6  -6.04324   ATACCAGAATACAAA        GATCTGATGAAGC CCA GCTT-ATCAGGTC        TTTTTTGTTTTTTAA 100 44
 LT978_06470 NONE
 LT978_06475 NONE
        rplU NONE
 LT978_06485 NONE
        rpmA 1268015 .. 1268033 +   -11  -5.78622   TAATGACACAAAAAA             CTCCGGTC GTT GACTGGAG             TTTTTTTTGCAGTAA 100 38
 LT978_06495 NONE
        obgE 1270224 .. 1270246 + -14.2  -2.62184   TTGATTAAAAAGACG           GAGAGCTTGC AAT GCAGGCTCTC           TGATGTAAAAGGGAG  95 33
        thrR NONE
        pheA 1271590 .. 1271606 +  -7.2   -5.9663   TTCGATATAAAAAAA              GCTCCC CTTCA GGGGGC              TTTTTTTTAATCTTT 100 31
        nadB NONE
        nadC NONE
        nadA NONE
        safA 1278248 .. 1278267 +  -6.4  -5.71712   GAAGATTAATGTTTC            GGGACGAT GTAT GTCGTTCC             TTTTTTTATGTCCAA 100 32
 LT978_06545 1278987 .. 1279014 + -14.2  -4.87665   ACAGCCGTTAAACGG        GACTGCCGGATG ATTT CATCCGGCAGTA         TTTTTATGGATAAAG 100 30
 LT978_06550 1279887 .. 1279903 +  -9.5  -5.96219   ATGACTTTGACGCAA              GACATGT GAC ACATGTC              TTTTTTTTCTGAATG 100 37
        ruvA 1280619 .. 1280638 +  -2.8  -2.92613   TTATTAAAGTAAGGT            GATGTTCA TGGA TGAACGGC             TCGTTTCAAGTGAAG  43 29
        ruvB NONE
 LT978_06565 NONE
        queA NONE
         tgt NONE
        yajC 1284368 .. 1284384 + -12.3  -5.80364   ATACATACAAAAAAA              GAGCGGA GAA TCCGCTC              TTTTTTTATTACGCT 100 52
 LT978_06590 1285631 .. 1285652 +  -5.1  -3.26184   CGTCACGAACTTGCC           GATGA-CCGG AAT CCGGATCAGC           TCTTCCCTTTTAATC  54 54
 LT978_06600 NONE
       secDF 1289842 .. 1289867 + -14.1  -5.75342   AAGAGTAAAAGGAAA         CAGGCTGTCTT CCGG AAGGCAGCCTG          TTTTTTTTAGGCCGC 100 33
 LT978_06610 1290450 .. 1290470 +  -5.3  -2.83403   GCGAGCAATTAACGG            CCCGGATTT CCT GAGACCGGG            GTTTACTCCCGGGAA  52 12
 LT978_06615 1290863 .. 1290901 + -10.4  -2.76227   GAATAACATTTGAAA  CCCCTCAGTCCGCTCTA GTATAA TAGGGTGG-TTGAGGGG   TGAATTTATGTTAGC  76 35
        recJ NONE
 LT978_06625 1293796 .. 1293829 + -14.8  -3.60323   ATATTAACCGCATAT     GGAAAAAAGCACTC GTGTCA GGGTGCTTTTTTCC      TATTATTTCATCATC 100 34
        relA NONE
         dtd 1296610 .. 1296625 + -10.4  -6.50115   CTAAACAATAAAAAA              GCTGCC GTTC GGCAGC               TTTTTTTTTTATGAT 100 30
 LT978_06645 1298777 .. 1298814 + -14.3  -5.95539   GCACCACGGGTATAA   CTCTCGTCCCTACTATA CATG TATAGTAGGAGCGGGAG    TTTTTTTATTTGAAG 100 305
        hisS 1300142 .. 1300159 +  -3.5  -3.79113   GAAGGAGAGGAACGC             TATGTTT GGAA GAACATA              TTATTGTGGCGAGAT  53 39
        aspS NONE
        ssrS 1302186 .. 1302199 +  -3.8  -2.60032   ACTTTATTTTTTGTG               CGCT AAAACC AGCG                GCTTTTTGACAAGCC  45 35
 LT978_06665 1303022 .. 1303043 +  -5.9  -5.96894   AAGTAAAAAGAAAAA           CAGCC-TTCT TCA GGAAAGGCTG           TTTTTTTATTTGAAT 100 35
        cymR NONE
 LT978_06680 1306102 .. 1306117 +  -6.1  -3.33696   GCCGAAAAGCTTGCC              GCCGT CGTTAA ACGGC               TTGCTTAAAACGGCG  58 2
        mnmA 1307291 .. 1307310 +  -5.7  -5.00616   AACACATGTAAAAAA            CCTCAAC TCGCAT GTTGGGG             TTTTTTAGCGAAAGG  76 39
 LT978_06690 NONE
 LT978_06695 1310389 .. 1310412 + -12.4  -4.16943   AAAGCGTAAATAAAA          CCCGGCACAT GTTT ATGCGCCGGG           TTTTCGCCTGTGGAA  95 32
 LT978_06700 NONE
 LT978_06705 NONE
 LT978_06710 1311327 .. 1311348 + -11.7  -4.85433   TTTAAGCGGAAAAAA           GGATACTTC TCCG GAAGTATCC            TTTTTACGTTTGTCT 100 36
 LT978_06735 1315823 .. 1315866 + -14.1  -5.21709   TGGTACCGCGAGACA GCTCTCGTCCCTGTGTGAAC GCATG GTTTGCATAGGGA-GAGAGC TTTTTTGCTGTCGCA 100 262
        alaS 1318534 .. 1318546 +  -4.1  -4.52703   GCATCTGCGGAAGAT                TGGAT AAA ATCCG                TTTTATAATCCTTTC  66 5
 LT978_06745 NONE
        ruvX NONE
 LT978_06755 1319639 .. 1319662 +   -16   -5.9873   AAATGAACGGAAAAA          GCCGGAGCGC ATAT GCGCTTCGGC           TTTTTTTTGTAATAA 100 40
        mltG 1320824 .. 1320851 + -13.6  -3.23274   AAAAAAGACAGCGAA        TAAAAGGAGGGC AAAA GCTCTCCTTTTA         TTCCATTCTGAAAGG 100 23
 LT978_06765 NONE
 LT978_06770 NONE
 LT978_06775 NONE
         udk 1324544 .. 1324567 +    -9  -3.83324   ATTATGTATAGGCTG          GAAGGGAA-TG AGA CAGTTCCCTTC          TTTCCCTGTTTATAA  76 74
        greA 1325242 .. 1325268 + -13.1  -5.32882   CGTTTAACAATGAAA         CACCTCGTCCA AAATG TGGATGAGGTG         TTTTTTATGATCGTA 100 45
 LT978_06790 NONE
 LT978_06795 1327820 .. 1327839 + -12.2  -5.39721   AATAACCGCAAAAAA            GCAGCTGA TTAT TCAGCTGC             TTTTTTCTGTCATAC 100 36
 LT978_06805 NONE
        mtnN 1329594 .. 1329618 +  -6.4  -4.07568   AAACGAATTCACTAA          GCGGGGGA TTCTCGTTC TCCTCCGC          TTTTCCAGGAGGAGG  71 26
 LT978_06815 NONE
 LT978_06820 1331731 .. 1331744 +  -2.3  -2.86604   ATAGATTTACATTCT               CTGTC GGCT GTCAG                CTTGTATTATAATGT  41 51
 LT978_06825 1332029 .. 1332050 + -13.1  -5.10877   GAAGAATAAAAAAAA           GCCATTGTC TTTT GACAATGGC            TTTTTCATTTCTTAT 100 32
 LT978_06840 1336350 .. 1336393 +  -9.9  -5.45652   TATGCATACAAGTTA GGCAGCATTC-AA-A-CCCGTT TTA GACGGGCTGTTTGAATGCTGCC TTTTTTGTTAGGCGT 100 187
 LT978_06845 1337571 .. 1337599 +  -8.8  -4.27465   TGCGGATTTAGTCTG        CCCGCAGCGCAT ATGAA GTTTGCTGCGGG        TTATTTTCGCTTGTG  83 344
 LT978_06850 NONE
 LT978_06855 1338115 .. 1338138 + -11.8  -5.93809   ATTGGTACTAGAGCA          GGCGGAAAAC CTAC GTTTTCCGTC           TTTTTTTTATGAAAA 100 30
 LT978_06860 1338845 .. 1338868 +  -5.3  -4.87786   CTTGGGAAATAAAAA          GAGCTGC TTAAGTCACT GCAGCTC           TTTTTGTGAAATTGG  76 48
 LT978_06865 NONE
 LT978_06870 1342801 .. 1342813 +  -2.7   -3.8125   AACAGAAGCGTAAGG                CAATT GAA GATTG                TGTTTTAATTGAAGA  51 39
 LT978_06880 NONE
        ybaK NONE
 LT978_06890 1346689 .. 1346714 + -12.7  -4.77165   GGTTTTCGCTGCCGA         CACCAATCGTT TAAA AACGGTTGGTG          TTTTGTTGTCAACCA 100 46
 LT978_06895 1348853 .. 1348871 + -10.3  -5.90231   TTTAAACTATTAAAA             GCAGGGA ATGGC TCCCTGC             TTTTTTTCTGTTTAT 100 28
 LT978_06900 NONE
        manA 1351933 .. 1351956 + -15.4  -4.79667   CTGTAATCTTCAAAA          CCCTTCTCTG GCAG CAGAGAAGGG           TTTTTCATCACTTTT 100 35
 LT978_06915 1353777 .. 1353792 +  -3.3  -4.18018   ATGTGAAAAACCCTT              TGTCT GAAAAA AGACA               TTTTAACTGCGGAGG  57 19
 LT978_06920 NONE
 LT978_06925 NONE
 LT978_06930 1355872 .. 1355893 +  -8.1  -5.83211   CTCGAATGAATAGAT           GATACCAAT CAAT GTTGGTATC            TTTTTTGTTTTAGTC 100 56
        satA NONE
 LT978_06940 1357086 .. 1357100 +  -5.7  -3.74792   TTGAAGACGTAGAAA               CCGTT ATATA AACGG               TTTACCTCTGTAGTA  62 174
 LT978_06945 1358207 .. 1358218 +  -2.2  -4.21768   AATTGTCAATTCGAA                TTCG AAAT CGAG                 TTTTAAACTTCATTA  57 39
 LT978_06950 NONE
 LT978_06955 NONE
 LT978_06960 NONE
 LT978_06965 1361796 .. 1361809 +  -5.3  -3.36878   AAAAAATTAAAAAAT               CTCAA CGAA TTGAG                TTGTACATCGATAAC  56 197
 LT978_06970 1362491 .. 1362508 +  -9.1  -4.93595   AATGACTATTCAATT             GGCGAGG ATAA CTTCGCC              TTTTTAAATTTTTAT  91 45
 LT978_06975 NONE
 LT978_06980 1365376 .. 1365395 +  -7.8  -5.27477   AAAGATTGCAATTCA            GGCGGGGA GAAA TCCTCGTC             TTTTTTAATTAAGGT 100 39
 LT978_06985 1366864 .. 1366876 +  -6.3  -3.18849   AAATATAACAGTATT                TGATG TTT CATCA                TCTTGCTCATATAGC  57 297
         tet 1368501 .. 1368528 +  -6.5  -5.40474   ACTAAAAAGGGAAAA        GGATC-AAACTT GATAA AAGTTTTGATCC        TTTTTTTAAGGAGCT  89 36
 LT978_06995 1369544 .. 1369569 +  -6.9  -5.61596   TCCAAAAGCCAAAGA         CAGTTCCGT CCATTTTA ACGGAGCTG          TTTTTTTATACCGCT  93 67
 LT978_07020 1375905 .. 1375944 +  -7.9  -5.43514   AGTTCTCAGAATGAG  AGGAGC-CGTACCGCC GGAATAGGA GGCGGTACGCGCTTCA  TTTTTTCGTTGTTTT 100 268
 LT978_07030 NONE
 LT978_07035 1378565 .. 1378583 +  -9.6  -5.45652   AGCCGTCCTCTTAAA             CACCTCTA TTT TAGGGGTG             TTTTTTGTTGAAAGT 100 251
 LT978_07045 NONE
        yqeH NONE
 LT978_07055 NONE
        yhbY NONE
 LT978_07065 NONE
        yqeK NONE
        rsfS NONE
 LT978_07080 1384173 .. 1384195 +  -8.5  -4.63184   CAGGCAAACCAAAAA           CCATCGTTT AAACG GAACGATGG           TTTTTAAAATGCATT  86 15
 LT978_07090 NONE
 LT978_07095 NONE
 LT978_07100 1388853 .. 1388867 +  -2.8  -5.42259   TCAACAGCATCATTT               CGTTTG CTT TGAACG               TTTTTTTCAAAATCA  80 144
         gpr NONE
 LT978_07130 NONE
 LT978_07135 1393395 .. 1393411 +  -5.1  -4.91194   AAGAGAAAAGCGGAT              GATTCCT TAA AGGAAGC              TTTTCTCTTTCTTGT  74 49
        lepA 1395342 .. 1395371 + -10.7  -4.03234   CCCGAAAAAATAACG       GAAGCCGCCGCAGT CCC GC-GCTGCGGCTTC       TTTCTGTAAAGAAGA  85 28
        hemW NONE
        hrcA NONE
        grpE NONE
        dnaK 1400212 .. 1400240 + -10.4   -5.7946   TTCAACAGACAGAAA        GTCAAAGTCAGG CATCT CTTGGCTTTGAC        TTTTTTTCTTGCCCG 100 89
        dnaJ NONE
        prmA NONE
 LT978_07175 NONE
        mtaB 1404581 .. 1404600 +  -7.1  -5.49809   TAACAGATAAAAAAA            CCGGTGC CTTCCC GCATCGG             TTTTTTTACGGTTTC  91 38
        rpsU NONE
 LT978_07195 1406353 .. 1406375 + -11.4  -5.64274   ATTGACAAGAAAAAA           GACATCTTTC TTA GAGAGATGTC           TTTTTTTATACATAA 100 40
 LT978_07200 NONE
        floA 1408808 .. 1408818 +  -2.4  -2.87463   AACCTCTCTATTAAG                 GAGG GAG CCGC                 TATATGCACGAGATT  41 39
 LT978_07210 1409264 .. 1409305 + -13.9  -5.60993   AAAAATAAAGTGTTA GAACCCCTTTTCAAATCAT ACAT ATGAGATGAAAGGGGGTTC  TTTTTTTATGGGGCA 100 33
        yqfC NONE
        yqfD NONE
 LT978_07225 1411768 .. 1411793 +  -9.1  -5.02502   AAAGTAATGCAAAAA         TGACCCGAT CTCCCGTT ATCGGGTCA          TTTTTATATGATGTG  91 34
 LT978_07230 NONE
        ybeY NONE
 LT978_07240 1414779 .. 1414793 +  -4.3  -3.06696   TCATTGGTTTACTCA               TCTTC CTGCC GAAGA               TATGTTAGCAGAAGA  50 3
 LT978_07245 NONE
         era NONE
 LT978_07255 NONE
        recO 1417529 .. 1417571 + -17.9  -5.26875   GGAACCGCGGGAGAA CTCTCGTCCCTATGTTTGC GGCCG GCAAGCATAGAGACGGGAG TTTTTTGGTTGCCGC 100 230
        glyQ NONE
        glyS 1420553 .. 1420580 +  -9.9  -4.28049   TAAAATAAAGAAAAA        GACGGTTGCTG TGTGAT CGGCAATCGTC         TTTTCCCCTTTTACA  86 33
        ccpN NONE
 LT978_07280 1422123 .. 1422143 +  -4.7  -4.70659   ACAAAGGGCCGATAA            CTCAGGA CGCTTTA TCCTGGG            TTTTTGGGTATGCAA  72 26
 LT978_07285 NONE
        dnaG NONE
        rpoD 1426033 .. 1426055 +  -9.9   -5.4251   TTCTCGAATAGAATG           GAACGGGTC TTTTT GATCCGTTC           TTTTTTATGTATAAG 100 30
 LT978_07300 1426788 .. 1426806 + -10.2  -5.74122   GAAAAACTCTATCCG             CCGCTTGG ATT CCGGGCGG             TTTTTTTATATGATA 100 72
 LT978_07305 NONE
 LT978_07310 1428691 .. 1428709 + -14.6  -5.95286   CTTCTTATAAAAAAA             CTGAGGCC CCG GGCCTCAG             TTTTTTATTTTTACT 100 31
 LT978_07325 NONE
 LT978_07330 1432859 .. 1432878 + -10.7  -5.00616   CAGCTCAATAAAAAA            GGAGGGG GAATTG CCCCTCC             TTTTTTACCCCGAGA  93 30
 LT978_07340 1434188 .. 1434222 + -10.9  -4.57569   TTTGATACATCATAA    GAAAATGGCCTGCTGT TCAG ACAGCTG-CCATTTTC     TTTTTGGAGCGATAC  90 76
 LT978_07345 1434676 .. 1434696 +  -8.3  -5.51165   CGTGCCGATAAAAAA            CCTCCTG CTATATA CAGGAGG            TTTTTTTCAGCTTTT 100 30
 LT978_07355 1435811 .. 1435833 + -14.2  -5.28414   CACAACGCAAAAAAA           GCTTGGCGGA ATA TCCGTCAAGC           TTTTTGTGTTTCTTG 100 41
 LT978_07375 1438924 .. 1438936 +  -2.6  -2.66009   AGTGTAATATGTCTG                CTGG AATCG CCGG                ATTGTGAGCTTTTTC  41 71
        sodA 1439664 .. 1439687 +  -8.9  -5.83226   AATAGTTCGATCAAA          CAAGGTCTC CCGCGA GAGGCCTTG           TTTTTTTATTGACTT 100 40
 LT978_07385 1441104 .. 1441126 +  -5.6  -4.63044   CTTTAGAATGAAAAA           TGGCACCT GAACAGA AGGTGTCA           TTTCTTTCTGTAAAT  72 73
 LT978_07390 1443314 .. 1443332 + -13.2  -5.93809   CAACTAACAGAAAAA             CGCTCACA ACC TGTGAGCG             TTTTTTTTATACAAA 100 34
 LT978_07395 1444370 .. 1444384 + -12.8  -3.66744   CAAAGCTGAGGGGAG               GGCGGG CTC CCCGCC               TCTTCTTCTTTATAG  95 32
        pstC NONE
        pstA NONE
        pstB 1447058 .. 1447068 +  -5.4  -3.28712   TCGGATAGGGGGAAG                 GACT GTG AGTC                 TTGTGAAGGAAGCGG  56 33
        pstB 1447851 .. 1447875 + -12.1  -4.67354   TTCGGATGAAAAAAA          CGGGCCCGG CCATTAA CCGGGTCCG          TTTTATATGTCTATT 100 32
        rpmG 1449277 .. 1449302 +  -6.9  -5.56264   AACACAGCGGAAAAA         GCTGGAGCTTT CAAT AAAGTTCTGGC          TTTTTTGTCTTTCAG  93 48
 LT978_07435 NONE
 LT978_07440 1450168 .. 1450199 + -14.6  -2.80817   GGATTTTTTGCATAA      GAAAACCTGCCG GAAAAAAA CGGCAGGTTTTC       TCGTATTGTCAGCTT  95 62
 LT978_07450 NONE
        glcK 1452978 .. 1453011 +  -7.5  -5.71712   ATCAAAACTGCTGAA     GAAAGTCTGCCTGC CCATATC GCGGGCGG-CTTTC     TTTTTTTATCTCCCC 100 27
 LT978_07460 1454184 .. 1454206 +    -2  -4.46112   AGGTCGCTTGTTTTT           TGAGACATCT GTG AAATTTCTCA           TTTGTTTACATAAAC  59 23
 LT978_07465 NONE
 LT978_07470 1455624 .. 1455646 + -16.4  -4.35116   AGCAATAAAAAATAA           GCCTGTATCC ATT GGATACAGGC           TTTTAATGTGCAGTC 100 33
 LT978_07480 1456625 .. 1456646 + -10.2  -5.10767   CTGTAAATGAAAAAA           GACAGACC ATAATC GGTCTGTC            TTTTTCTGTTCAGTG  93 35
 LT978_07490 1457527 .. 1457563 +  -9.5  -5.09426   ATCATAAGAGAAAAA    CGAAGATCCGCTGATCA AAT TTATCAGCTAATCTTCG    TTTTTTGCGGTTGCG  91 34
 LT978_07500 1458561 .. 1458600 + -11.4   -3.9279   TTAAGATGATAAAAA  GCTGAATGGCCGGGAGGG ATTT CTCCCTCAGCTATTCAGC   TTTGTCAGCTTCAAT  90 32
 LT978_07510 1461089 .. 1461119 + -17.2  -3.05769   GCTTATTTTTTATTT       TTATGCGTTTTACA CAG TGTAAAACGCATAA       TCTCTCCTTTGCCGG 100 125
 LT978_07515 1462261 .. 1462281 +  -6.2  -5.00884   GATTAAACGAACCTG           GCCG-TTGA AGGA TCAAGCGGC            TTTTTTGAAAAGGCT  79 35
 LT978_07520 NONE
 LT978_07525 NONE
 LT978_07530 NONE
 LT978_07535 NONE
 LT978_07540 NONE
 LT978_07545 NONE
 LT978_07550 1465353 .. 1465375 + -15.6  -3.83155   GCGAATCACACGAAA           GGTCCTCCTG TAT CAGGAGGGCC           TTATTGGTATTCCTC 100 42
        tapA NONE
 LT978_07565 1467205 .. 1467216 +  -5.8  -2.83403   TGAATACGGTTGCAA                CCTG GCGA CAGG                 ATTTGATAACAAAAA  54 38
 LT978_07570 1468064 .. 1468097 +  -8.2  -4.75063   GTCGGACAGTTAAAA     GAGGAGTTGTGC ACATATGGCG GCACTACTCCTC      TTTTTGCGCTTTTCT  87 48
        gcvT NONE
       gcvPA NONE
       gcvPB 1475658 .. 1475683 +  -8.4   -5.2189   CACGGTATAAAAAAA         GAGCT-TCCGT ATAAA ACGGACAGCTC         TTTTTTCATGATTAG 100 41
 LT978_07615 NONE
        mntR 1477635 .. 1477657 +  -8.4  -5.62219   ATCCCGGTGAATAAA          GGGCAGCCC GAAATG GGGC-GCCC           TTTTTTTAATGTCTT 100 27
 LT978_07625 1478767 .. 1478778 +  -3.6  -4.81685   GCCTCTGTGTCCGGC                GCGG TGCT TCGC                 TTTTTGCTCCTTCAT  69 169
 LT978_07640 1480789 .. 1480807 +  -7.5  -5.31275   TCCGGTATGGTAAAA             TGTTCAC GAGAA GTGAACA             TTTTTTATGCTGAAA 100 59
 LT978_07645 NONE
         efp 1482546 .. 1482569 +  -8.1  -5.87688   TTAAAGAAATTCGGA          GTCTGCTCC TTTTAC GGGGCAGGC           TTTTTTTTGCGTTCT 100 41
 LT978_07655 NONE
    spoIIIAA NONE
 LT978_07665 NONE
    spoIIIAC 1484704 .. 1484733 +  -2.9  -3.58343   CCAAGGATAGGGGGG       CTTACAGATTGAG ATTG TTCAAATTGTAGG        TTTAGGCCTGATCGC  49 31
    spoIIIAD NONE
    spoIIIAE 1486347 .. 1486363 +  -2.2  -4.57569   GATGAAATAAAGGAG              GCCCAT TGGAT ATGAGC              TTTTTAACAGAATGG  61 31
    spoIIIAF NONE
    spoIIIAG NONE
 LT978_07695 1488330 .. 1488348 + -11.7   -4.5265   TAAGAGATCTCCACC             GCCCGCA CCCGC TGCGGGC             TTTTCTGATGTCATT 100 38
        accB NONE
        accC NONE
 LT978_07710 1490751 .. 1490795 + -13.2  -3.65353   AAGAAATGTAATGAG CGTATAAAA-ACCAAGGGGAT GGGC AGCCCTTTGGTTTTTTATACG TTTCCCGTCATTTCA 100 30
        nusB NONE
        folD 1492313 .. 1492324 +  -2.2  -2.90496   ATGAGCACGATACCC                GCTT CTTA AGGC                 TCCTTTCAGCCAGAG  42 72
        xseA NONE
 LT978_07730 NONE
 LT978_07735 1495003 .. 1495017 +  -6.4  -4.42386   TGCTGAAAGTGAGTT               GATCCG CTT TGGATC               TTTTATCAATACAGG  75 161
         dxs NONE
 LT978_07745 1497748 .. 1497771 + -11.2  -5.26316   AAAGACAGATGTACC          GGAATAATAG GGGG CTATTATTCC           TTTTTTCTGCCATCA 100 19
        argR NONE
        recN 1500060 .. 1500083 +    -9  -5.83226   GTAAAAACGACAGGA          TAAGCTG-CTG ATA CAGGCAGCTTA          TTTTTTTGTTCCATT 100 23
      spoIVB 1501507 .. 1501525 + -14.6  -5.74122   GACAAAGCAAGCTGA             CTGCCGGA TGA TCCGGCAG             TTTTTTTATGTGATG 100 26
       spo0A 1502616 .. 1502653 + -16.4  -4.28651   CTAAATGTCTTTTTG   CGCCTTCTATTCCGTG CATGAA CGCGGAAGAGAAGGCG    TTTTGAGATTTTGCT 100 54
        ytaF 1507865 .. 1507886 +    -3  -5.04385   AATGTTTCTATTCGG           GAGAG-TGC ATGAC GCGGCTCTC           TTTTTTGCCGATCTG  70 81
 LT978_07805 NONE
 LT978_07810 NONE
 LT978_07815 1509907 .. 1509928 +  -8.8  -5.60993   GAATGCCGCAGCTGA           GAAGACTG GTCAGA CAGTCTTC            TTTTTTTATGGGCGG 100 26
 LT978_07820 NONE
 LT978_07825 NONE
 LT978_07830 NONE
        mmgD NONE
 LT978_07840 NONE
        prpB 1516765 .. 1516782 +    -7   -5.4477   CGGACGACTGAAAAA             GCCCTT TTTTGC AAGGGC              TTTTTTTACAGCTTT  91 30
 LT978_07855 NONE
        yqiS NONE
         bcd NONE
         buk NONE
        lpdA NONE
 LT978_07880 NONE
      bfmBAB NONE
 LT978_07890 1527222 .. 1527250 + -11.8  -5.85244   AGTCTATTAAAAAAA        ACTCCTTTTGCC CGGGC GGCAAAAGGAGC        TTTTTTATTTTCATT 100 31
        brxB 1528787 .. 1528810 + -10.3  -5.37043   TAAGTGAAAGAAAAA          CCCCGG-AGC CGAGC GCTTCCGGGG          TTTTTTATATGGAAT 100 38
 LT978_07905 1529793 .. 1529811 +  -8.9  -5.10767   GAGAAATAAAAGAAA             GCTCAAC TTTTC GTTGAGC             TTTTTATCTTGAATA  91 32
 LT978_07910 NONE
 LT978_07915 1531241 .. 1531260 +  -9.4  -5.75342   ATAACTGTGAGAAAA            GAAGAAGA ATGC TCTTCTTC             TTTTTTTTGAGAAAG 100 44
 LT978_07920 NONE
 LT978_07925 NONE
         mce NONE
 LT978_07940 1534975 .. 1534987 +  -7.7  -2.71712   ACCGAAAAAAAAGCA                CGGTA ATA TACCG                CTTTAAACGGAGGGA  62 7
 LT978_07945 1536133 .. 1536152 +   -10  -5.37865   CCAACTAAAAACGAA            GCACCCAG TTGA TTGGGTGC             TTTTTTCATTCTTCA 100 33
 LT978_07960 1538767 .. 1538777 +  -2.6  -4.17023   TAAATATCATTTTAT                 TTTA ATT TAAA                 TTTTAAAATGGTTAA  55 83
        gndA 1540235 .. 1540257 + -16.3  -4.55023   TGAAGTAATGAAGAA           GCCCCCGCA TTGAT TGCGGGGGC           TTTTCTGATATTAAA 100 33
         rnz 1542966 .. 1542978 +  -6.3  -2.71712   TGATATATAATAAAA                CGTAA TAA TTACG                ATTTAAAAAAAGGGG  54 69
        rpmG 1543162 .. 1543195 + -21.3  -4.51196   AATAGATCACGATAA     CAAAAGCCATTGTGC CGTT GCACAATGGCTTTTG      TTTTATCAGTTTACC 100 36
 LT978_08000 1546884 .. 1546909 + -14.1  -5.44721   GTTTATATAAAAAGG         GCATCAACGGC ACAT GCTGTTGATGC          TTTTTTTGAAATGCT 100 323
        fabD NONE
 LT978_08015 NONE
 LT978_08020 NONE
 LT978_08025 NONE
 LT978_08030 NONE
 LT978_08035 NONE
 LT978_08040 NONE
 LT978_08045 1578577 .. 1578602 +  -3.3   -4.3295   ATTTGTGACTATCTG         ATTGC-CTGTCA AAA TGACGGAGCAAA         TTTAATTTTCTTAGG  60 25
 LT978_08050 NONE
 LT978_08055 NONE
 LT978_08060 NONE
 LT978_08065 1614367 .. 1614397 +  -6.9  -2.94299   AAATTCACATATCCG      CCCGCC-GGGTTTA CTCG TAAGCTTTGGCGGG       TCATTTCAAATCTTG  61 39
 LT978_08070 1615604 .. 1615623 + -12.2  -3.83205   AACGAAAAAATAAAA            GAGGCTTC ACGG GAAGCCTC             TTTACTCTGGGGGCT  90 40
 LT978_08075 NONE
 LT978_08080 1617704 .. 1617722 + -10.3  -3.93695   AACAGAATGAAAAAA             GCATGGG ATGCC CCCATGC             TTTATGACTGGTCCG  85 40
 LT978_08090 NONE
 LT978_08095 NONE
        dsdA 1622079 .. 1622098 +  -4.4   -5.0917   AGTGAGGCGGTTTTC            CG-TTACAA TCT TTGTAAGCG            TTTGTTTTTTAATCG  75 36
        coaA 1623124 .. 1623137 +  -3.9  -3.28309   GGAGGAAGCGAATAT               TATGA TGCA TCATA                TTGAATTGTATGTAT  49 46
 LT978_08110 1623705 .. 1623727 + -16.3  -5.46698   TTTTACCTCCGTGTG           CGGCGGGCT TCTTC AGCCCGCCG           TTTTTTCATTTTAAC 100 213
 LT978_08140 NONE
 LT978_08145 NONE
 LT978_08150 NONE
 LT978_08155 NONE
 LT978_08160 1629477 .. 1629504 +   -10  -5.22039   TTTTATGACGGGAAA        GCGAAAGAAC CAGCATAC GTTCTTTCGC         TTTTTTACGTTTGCG 100 33
 LT978_08170 1630772 .. 1630793 + -12.3  -5.00196   ACAAATATAAATAAA           CCGGCATCT GACA AGGTGCCGG            TTTTATTGTTTAAGA 100 27
 LT978_08185 NONE
 LT978_08190 1633816 .. 1633832 +    -5  -4.33621   CAACGGTCAGTGTGC              CGCGGC CTTGT GCGGCG              TTTGTTAATTCGATG  67 137
 LT978_08200 NONE
        aspA 1636779 .. 1636792 +  -2.5  -2.96695   GATGAGGCAGTATAG               TATAA TTTG TTATA                TCATTTGATGAAAGC  43 105
        nhaC NONE
 LT978_08215 1639584 .. 1639608 +  -9.3  -5.67063   AATAAACAACTCTTA          CAGTACCGG ACATGTG CCGGTGCTG          TTTTTTTATCATGAA 100 36
 LT978_08220 NONE
 LT978_08225 1640236 .. 1640250 +  -5.6  -3.10389   GGGTTCTTTTTTTAT               GCCCGA ATC TCGCGC               CTTTCTATGATTTCT  54 1
      spoIIM NONE
         fur 1641555 .. 1641574 +    -5  -5.38348   GTAAAAGCCTATGAA            CCTTTTCT GCCA GGAAAGGG             TTTTTTGCTGTTTTT  82 37
 LT978_08240 NONE
        xerD 1642787 .. 1642809 + -11.9  -5.03145   TCCGCGCGCTTAGGA           GCCGCTGCC AGAGG GGCCGCGGC           TTTTTTGCCGGATTG 100 28
        deoB NONE
 LT978_08255 1644979 .. 1645002 + -11.8  -5.74122   TAAGTCAGCATAAGT          CAGCTGTTTC TTCG GAAGCAGCTG           TTTTTTTGTGTCCTC 100 38
 LT978_08260 NONE
     spoIIAA NONE
     spoIIAB 1647140 .. 1647151 +    -3   -2.7186   ACACCTATCAAAAAG                CAAA GCGC TTTG                 TAATTAAGGAGATTT  41 7
        sigF 1647933 .. 1647953 +  -2.4  -6.02919   TGGATCATACGGAAA            GCTGACCT TTTAC GGGCCGGC            TTTTTTTATTTGTGC 100 21
 LT978_08280 NONE
 LT978_08285 NONE
      spoVAC NONE
      spoVAD NONE
      spoVAE NONE
 LT978_08305 NONE
 LT978_08310 1653054 .. 1653076 +  -9.2  -4.09685   ACGGGACTTGTATAA           GGACAGCT CAAAAGA AGCTGTCC           TTTTCACCCATAGGC  82 89
        lysA 1654443 .. 1654469 +  -9.5  -4.74504   ACAATAAATAAAAAA         GAGACCGGA ACAATGGCG TCCGGTCTC         TTTTTGCGTTCAGCT  90 34
 LT978_08325 1656105 .. 1656123 + -11.7  -5.77988   GATAATGACGGAAAA             CCCGCCT TTTTT AGGCGGG             TTTTTTTATGTATAT 100 36
 LT978_08330 1656760 .. 1656773 +  -5.2  -2.87881   AATGGATGGGGTGCG               GGGC TTATTT GCCC                TCTGTGCAGGGATTC  50 50
        lepB 1657401 .. 1657425 + -12.3  -5.72616   AAATAAACCGTACAG          GCAGTTTTCTT CAT GAGAAAACTGC          TTTTTTTATATAAAT 100 35
 LT978_08340 1658313 .. 1658339 + -11.7  -5.00616   ATTAAAACTGGCAAA        GCCCCGAACTGT GTAA ACA-TTCGGGGC         TTTTTTGACGCCAAA 100 355
        ribD NONE
        ribE NONE
 LT978_08355 NONE
        ribE NONE
        ribT 1662329 .. 1662357 + -13.2  -3.77806   TAATAACTGACAAAT        GCTCCCGGAATC TTCAC GGTTTCGGGAGC        TGTTTTGATATAGAA 100 31
 LT978_08380 NONE
        scpB NONE
 LT978_08390 1665212 .. 1665229 +  -7.7  -5.71712   TCAGTCAGATAAAAA             CTCTTCC TTTT GGGAGAG              TTTTTTTATGTGAAA 100 29
 LT978_08395 NONE
 LT978_08400 NONE
        spmB 1667584 .. 1667601 + -12.7  -5.03994   CGTTATTATTTGGAA             GCGCCTG AAAT CAGGCGC              TTTTTATATATCAGA 100 18
 LT978_08410 NONE
        resA 1669024 .. 1669034 +  -2.4  -3.13403   ATATGAATTTAATTA                 AGCC GGA GGCG                 TCTTCATGAAAAAGG  43 6
 LT978_08420 NONE
        ccsB NONE
        resD NONE
 LT978_08435 1674475 .. 1674495 + -12.6  -6.12458   TTGTTCCATACGAAA            CACCCGCA GAACA TGCGGGTG            TTTTTTGTTTTTTTC 100 56
        sigX NONE
 LT978_08445 1676267 .. 1676290 + -12.6  -4.73864   TTAAACGTAAAAAAA          CCCAAAACAT ATGA ATGTTTTGGG           TTTTCTGTTGGTTAC 100 37
 LT978_08455 1678950 .. 1678979 +  -8.6  -6.02919   CAATAAAGGCTTAAA       GCGTCCGCTCTGT GAAGA ACAGC-CGGACGC       TTTTTTTGTTTGTGC 100 35
 LT978_08465 NONE
 LT978_08470 NONE
 LT978_08475 NONE
 LT978_08480 1683547 .. 1683557 +  -3.2  -2.73799   TGAAAACGGACAAGG                 TGTG AAG CGCA                 TGGATTCTTTATGGA  44 84
 LT978_08485 NONE
 LT978_08490 1684990 .. 1685009 +  -3.7  -4.03234   CTATGACTCATTTAT            TCATATA CTGTGT TATATGA             TTTGTGTGCAAGAAG  57 125
 LT978_08495 1685638 .. 1685663 +  -8.9  -5.40072   ATAAAAAAGATTTGA         AACGGCAGCTG TTTT CAGCGGCCGTC          TTTTTTTAAGCGAAA 100 37
        gudB 1687089 .. 1687110 +  -8.1  -5.38047   CATAAACAAAAAAAA           TCTCCTATG ATAA TATAGGAGA            TTTTTTATATGAGTG 100 53
 LT978_08505 1688141 .. 1688164 + -12.6  -5.03145   ACGGCTGGGTGCAGA          GAGCATATGA TCAT TCATATGCTC           TTTTTTAAAAAATTG 100 16
        prsW 1688904 .. 1688928 + -12.2  -5.66684   TGATCCAAGTGTGAA          GAAACCGCGC ATCGC GTGCGGTTTC          TTTTTTTATGCCTTG 100 27
        sleB NONE
        ypeB 1691289 .. 1691311 + -11.4  -5.64006   TATAAAAATAAAGGA           GGAAAGGACT AAA AGTCTTTTCC           TTTTTTTCATTACAT 100 36
 LT978_08525 NONE
 LT978_08530 NONE
         cmk 1693101 .. 1693124 +  -7.6  -4.01902   AAAACTTTTTATTGA          TCATTCAAAA TCTT TTTTGGATGA           TTCTTTAATACATAT  74 129
        rpsA NONE
         fni 1695440 .. 1695459 + -13.6  -4.42491   CAGCAGACGTTAAAA            GGCATGCG AACC CGCATGCC             TTTCTCTGTTTTTTA 100 28
 LT978_08555 1696371 .. 1696387 +    -8  -4.25256   AATAAATGAGTTAAG              CCCTTC TGTTT GAAGGG              TTCTTTTCATAGCGA  79 114
        engA NONE
 LT978_08565 1699028 .. 1699056 + -11.9  -6.28401   ATATAGTCAACTTGA        CTGAAGCAAAG TCCCCCT CTTTGCTTCAG        TTTTTTTGTTTTTTC 100 213
 LT978_08570 NONE
 LT978_08575 1700118 .. 1700150 +  -2.8  -5.79588   CGAAACAGGAATGAA      CCTTTTTCCC GCGCATACAAATA GGGAGAAAGG      TTTTTTTGATTTTGA  85 27
      spoIVA 1701793 .. 1701809 +  -4.3  -4.59954   TAAGCTGAAGGACCT              CTTCCTG AAA CGGGGGG              TCTTTTTTTATTCTT  68 38
         hbs 1702485 .. 1702514 + -13.7  -3.34398   ACTTTGTTTCTTCAC       AGAAAAGCCCCTT GATA AAGGGGCTTTTCA        TATTTAAGCAGCCCC 100 77
        folE NONE
        mtrB 1703478 .. 1703494 +  -2.1   -2.8433   CAAATGCCCGCAAAC              GGCGGGA GAA TACAGCC              AATTTCTTTTTTTTA  41 63
        hepS NONE
        menG NONE
        hepT 1706081 .. 1706091 +  -3.2  -3.48064   AAGATGTGAACATTC                 TCCG CCC TGGA                 TTGATTAATTGTCAG  49 56
         ndk 1706712 .. 1706727 +    -9  -5.80364   TTCATTTCTCACAAA              TCAGCC TGCG GGCTGA               TTTTTTTATTGAAAT 100 120
 LT978_08620 NONE
        aroC NONE
        aroB NONE
        aroH 1710422 .. 1710445 + -12.6  -4.73677   CACGTTTTTATTCTG          CCCAAAAGAA GCCT TTCTTTTGGG           TTTATTTCTTATACG 100 158
        trpE NONE
        trpD NONE
        trpC NONE
 LT978_08655 NONE
        trpB NONE
        trpA NONE
        hisC 1717519 .. 1717539 +  -9.8  -3.93262   GCTGAAATATTATAA            GAGGTGAT CAAGC ATCACCTC            TTTGCTCTATTAAAA  83 26
 LT978_08675 NONE
        aroA 1719978 .. 1719999 + -10.9   -5.5353   CAATTAGCCAAAAAA           GCCTGAAGA CGAT TCTTCGGGC            TTTTTTCTTCATGTG 100 20
 LT978_08685 NONE
 LT978_08690 1722193 .. 1722213 + -11.2  -3.67597   CTCACATAAATGACA            GCCTTGCA GAATA TGCAAGGC            TTGTTGCGTAAAGAG  83 32
 LT978_08695 1722703 .. 1722722 +    -5  -3.10879   AAACTCCAGGTATCC            TGCAAAAC ACCC GTTTTGCC             TCTGTTGACCTTGCT  52 41
 LT978_08700 NONE
 LT978_08705 NONE
 LT978_08710 1724849 .. 1724865 +    -8  -5.48825   TACTTTATGAAAAGA              GCTGAC CGGAT GTCAGC              TTTTTTTGCATGATA 100 70
 LT978_08715 NONE
        ypjB NONE
 LT978_08725 1727561 .. 1727576 + -11.8   -5.2291   AACACGAACAGTAAA              GGCGGC TTTT GCCGCC               TTTTTATTATCGTCT 100 27
 LT978_08735 NONE
        dapB NONE
        mgsA NONE
       bshB1 NONE
        bshA NONE
 LT978_08760 NONE
 LT978_08765 1734339 .. 1734358 +  -4.4  -3.75402   TAAACAAGTGGGAAT            CCTTCT-TA TTT TACAGAAGG            CTTTTTTGCTTGCGA  57 189
        panB NONE
        panC NONE
        panD 1736508 .. 1736522 +  -8.5  -5.10163   GATTTTGTAAAAGAG               CCCCC TTCAT GGGGG               TTTTCTTTTAAGATT  91 31
        dinG 1739413 .. 1739428 +  -7.5  -3.81951   CCAAACGGAATAAAA              GCCGC ATAAAC GCGGC               TTTCGTGGTGTGGGA  72 28
 LT978_08790 NONE
 LT978_08795 NONE
 LT978_08800 1741432 .. 1741461 + -14.5  -3.17194   AACACAGCTGATTCT       G-GAAAAGCGGCTT TTA AAGCCGCTTTTCAC       TTGCATTGACCCCGT  95 30
        asnS 1742872 .. 1742889 +  -7.7  -4.87665   GTTATGAAAAACGAA             GTCTCCT GCAA GGGAGAC              TTTTTCTAAGTAAAG  86 43
 LT978_08810 NONE
         nth NONE
 LT978_08820 1744817 .. 1744837 +  -8.3  -5.71712   AACAAATGTTAAAAA            CCTCCTTTT CTT ATAAGGAGG            TTTTTTTGTATGAAA 100 29
 LT978_08835 1749386 .. 1749398 +  -4.1  -5.24531   ACGTGGAAGGGCGGT                TTGGG CCG CCTAA                TTTTTTATCAAGCGT  76 86
 LT978_08845 NONE
 LT978_08850 1750327 .. 1750352 + -15.5  -4.52589   GATGAAATTGAAAAA         GAAGGCAGCTG AAAA CGGCTGCCTTC          TTTTATATAAAGGGG 100 14
 LT978_08860 1751181 .. 1751212 + -11.8  -5.00616   AGTATCTTCAAATAA      AAAGCATGAATGAT ATCC ATCATTCATGCTTA       TTTTTTAGGGAAAAA 100 26
 LT978_08870 1752269 .. 1752287 +  -8.1  -5.88565   ATAAAAATGAAGTAG             GCAGGGG CTGAT TCCCTGC             TTTTTTTCTTGTGCA 100 26
 LT978_08875 NONE
 LT978_08880 1755847 .. 1755873 +  -6.6  -3.01712   TGTGAGAATTGCCCG         GCTCAAGAGGAA ATA TTCCTCTTGAAA         TATTGCCCGGGAAAG  58 1
 LT978_08890 1756467 .. 1756488 +    -8   -5.0133   ATCAGCAAATCAAAA           TGGGGC-CC GATGG GGAGCCCCA           TTTTTTAAGCAGGTG  86 72
 LT978_08895 NONE
        gpsB 1757444 .. 1757468 +  -5.1  -3.96148   ACGAATAAGGCAGAT         GC-ACTTGTC AAATGA GACAAGTTGC          TTTATAATGAACAAG  61 33
        rnpB 1757904 .. 1757923 +   -10  -4.68724   ATATGACAAATTAGA            GCTCTCCT TTAA AGGGGAGC             TTTTATCTTGAATGA  89 56
 LT978_08910 1759187 .. 1759226 + -14.5  -3.91196   TAGATTTTCAAGTTG  GAGCCGAAAAACAGGGA CTTAAA TTCCTGTTTTTCGGCTA   TTTAGTATATATAAA 100 94
 LT978_08915 1759943 .. 1759979 + -13.1  -3.57389   TTTCTGTAGATATAA    TTTTAACAGGCTGTCGA TAT TCGACAGCCTGTAAGCA    TCTTTACGTTTTATT 100 52
 LT978_08925 1760524 .. 1760538 +   -10  -5.94214   TGATAATGACAAAAA               CTTGGC GAG GCCAAG               TTTTTTTGTTGTATT 100 38
 LT978_08930 1762543 .. 1762566 + -10.3  -5.52384   CGTATAAAAACAAGA          GCTGCAGGA ATCTTA TCCTGCGGC           TTTTTTTAATCCGGG 100 34
 LT978_08935 1764412 .. 1764447 + -13.4  -6.28401   CGTGTAGATCATTCG    GCATTGCTTGCTCTTT TTTT GGAGAGCGGGCAATGC     TTTTTTTATTTTTTA 100 289
         xpt NONE
 LT978_08945 1766443 .. 1766453 +  -3.2   -5.9003   TGCTGAACTTTTTGC                 GAGG CAT CTTC                 TTTTTTTATTAGTTT  91 102
 LT978_08955 1768055 .. 1768071 +  -5.1  -5.88476   CTCGTCTGAAAAATG              GCATATG CTT CAGATGC              TTTTTTGTTTCTTTT 100 109
 LT978_08970 1769890 .. 1769910 +  -9.7  -4.79756   CGAATATGTAAAAAA            CCTGCCG TATATAT CGGCAGG            TTTTTCAGTTATATG  91 30
 LT978_08980 NONE
 LT978_08985 1772297 .. 1772307 +    -4  -2.62642   ACACCGCAAAATAGA                 GATT GAA AATC                 ATTCTCACTCATGAT  45 27
        fbpC 1772465 .. 1772491 +  -7.2  -5.72622   CGATGTCTTCTTAAA         CATCTGCGGTTT TTA ATGCCGCGGGTG         TTTTTTCTTTATCAG 100 27
 LT978_08995 NONE
 LT978_09000 NONE
 LT978_09005 1776781 .. 1776807 + -10.9  -5.41746   TGAGTAACGTGACGG         CAGCATCTTCC AAATG GGGGGATGCTG         TTTTTTTACCGCCTT 100 34
 LT978_09010 1777737 .. 1777766 + -10.7  -4.77629   GCTCGAAAAGCTGAA       CGCCAGAGAGATC AGCT GATCCCTCTAGCG        TTTTGTATTGCTTTT  91 7
 LT978_09030 NONE
 LT978_09035 1779963 .. 1779987 + -15.9  -4.67904   CAAATCAATAAAAAA          TAAAACCGCAG CTT CTGCGGTTTTA          TTTTTCGAATTCATC 100 30
 LT978_09045 1780586 .. 1780605 + -13.6  -3.37299   GACGGCAATCAAATA            GGAGAGGC ATAC GCCTCTCC             TCTATTTGTCATCTG 100 25
 LT978_09070 NONE
 LT978_09075 1784720 .. 1784746 +  -2.3  -3.08992   ATCGGCAAAAGCTAA        G-CGGCGCAA TAGAACGC TTGTGCCGAC         TATGTTAGAATAAGT  43 26
 LT978_09080 1785928 .. 1785942 +  -7.8  -5.67283   CAGTGATAACAAAAA               GGTGCG CCA TGCACC               TTTTTTATTTGAATT 100 35
        ilvD 1787884 .. 1787931 +  -7.3  -5.38047   AACAATTGAATTCCG GCCCCCTCTATAGTATCCTTG ACTTCATA TAAGGAT-TT-TAGAGGGGGC TTTTTTATGTCAATG  91 53
 LT978_09090 1788375 .. 1788391 +  -9.4  -5.26119   TGCGCACTGCTGAAA              TGCCCG AATTC CGGGCA              TTTTCTTTTTGGAGA 100 28
 LT978_09095 1789175 .. 1789192 +  -7.7  -4.54681   GTGTCATCCATGTAA             GCTCATG ATAT CATGGGC              TTCTTTTTCGTTAAT  83 18
 LT978_09100 1790075 .. 1790102 +  -6.4  -5.64304   GAAGAAATAAAAAAA        TCATTTCTGAGA AATT TTGCAGAAATGA         TTTTTTATTGTGTTA  90 47
 LT978_09105 NONE
 LT978_09110 NONE
 LT978_09115 1792074 .. 1792100 + -13.1  -5.64421   CCGTGCATAAAAAAA         GCACAGTCTCT ATACG AGAGGCTGTGC         TTTTTTATTTCAGAT 100 31
        ilvA NONE
 LT978_09135 1795564 .. 1795603 +  -3.7  -5.67063   GCATAACGGTGCACA TTCCTTAGCGCCTTCCTTT TGAT AAGGGAGGGTGC-G-GGAA  TTTTTTTATGATGAA  83 35
 LT978_09140 NONE
 LT978_09145 NONE
 LT978_09150 1797657 .. 1797680 +  -8.2  -5.71712   TTTTCATAAAAAAAA          CACAGATCCT TTCA GGGATTTGTG           TTTTTTTGTGTCAGC 100 42
        msrA NONE
        msrB 1799217 .. 1799259 +    -4  -6.38492   ATTTGAAAAATAGAG CTCAGCAATGAGGCCTGCCT ATC AGACAGGCCTTTTTTCTATG TTTTTTTTTCTTCAT 100 28
 LT978_09180 1801949 .. 1801975 +  -5.9  -5.67283   ATCAGCCACTATAGG         CCACAGAGT CCCTCACAC GCTCTGTGG         TTTTTTGTTTAGATT 100 73
 LT978_09190 1802749 .. 1802768 +  -7.9   -5.1244   GATAAAACTGTGTAT            GACAGTC GGAACG GACTGTC             TTTTTCTGTTAATCA  89 36
 LT978_09195 NONE
 LT978_09200 NONE
 LT978_09205 1805786 .. 1805802 +    -8  -5.80951   GTATTGCAAAGTTAA              GCTCTC AGAAA GAGAGC              TTTTTTATTTTCGAT 100 69
 LT978_09210 NONE
 LT978_09215 1806456 .. 1806469 +  -2.4  -2.59741   GATACTGTTGGCTGA               GGAA TTATTT TTCC                ATGTATTGTATTTTA  40 181
 LT978_09220 1806947 .. 1806981 +  -8.8  -3.48884   GTTTCATTTAATCTG     TTATAATCAATCTGTA AAA TACAGACTGGTTATAG     TGTATTTCTTTAACA  74 120
 LT978_09230 NONE
 LT978_09235 1808272 .. 1808292 +  -8.3  -4.55128   TAATTTAAAATTAAA            GCCCCTT ATTCAGG AAGGGGC            TTTTGCTTTGCAACT  86 38
 LT978_09255 1812058 .. 1812069 +  -2.2  -4.41047   AGAGTCAACGCTCTT                TACC ATCA GGTG                 TTTTCCTTAAGCGGT  59 296
 LT978_09290 1817621 .. 1817633 +  -7.7  -4.43877   TTCGCGGTGGCTTAT                TCCTG CCC CAGGA                TTTATTTGACAATTG  80 131
 LT978_09300 1818429 .. 1818452 +    -6  -4.46212   GGCTTCCGATTGATC          CTGTTC-CGCC TGT GACGAGAACAG          TTTTATCGTGAAAAA  72 412
        phyC 1819980 .. 1819997 +  -9.9   -4.8048   ATAAACATGAAAAAA             GCAGCTT ATCC AAGCTGC              TTTTTGATGTGAAGA  91 37
 LT978_09325 1821933 .. 1821955 +  -2.6   -5.2696   TTAATAACGGATATC           AGGCTCTG TCTCTTT CGGAGCCG           TTTTTTACGTTTTAC  73 37
 LT978_09330 NONE
 LT978_09335 1824109 .. 1824123 +  -4.2  -2.94099   CAATTGGGAGTTGGC               CCGCAT ACA ATGCCG               TATATCGTAAGAAGA  49 59
 LT978_09340 1824328 .. 1824356 +   -14  -5.38549   CTATAATGAAAATCA        GCCTGCAGAGAA CATCA TTTTCTGCAGGC        TTTTTGTTATTTCCA 100 53
 LT978_09350 NONE
 LT978_09355 NONE
 LT978_09360 NONE
 LT978_09365 NONE
        ablB 1829949 .. 1829965 +  -2.3  -2.90496   ATTCATAAGGAGGAA              TTCGTTT GAC AAACAAA              TGGTTTCAGCCGAAG  42 17
        ablA NONE
 LT978_09380 1831639 .. 1831652 +  -2.4   -4.5028   AAACGGAATTATTTT               GACT TCTCCT AGTC                TTCTTTTGTTGTAAT  59 14
 LT978_09385 1831957 .. 1831971 + -11.4  -5.80817   ACGCCTGACGAAAAA               CCGCAC ATT GTGCGG               TTTTTTTCTGTTGAA 100 33
 LT978_09390 NONE
 LT978_09395 1833535 .. 1833545 +  -4.6  -3.46885   CGTCATTATCTTTTC                 TCCC TCC GGGG                 CTTGTTTTTTTAAAA  53 172
 LT978_09405 1833831 .. 1833850 +  -5.7  -5.09225   ACTGAAACTGCGGAA            CCGAAGT GAAAAA GCTTCGG             TTTTTTCAATCAGCT  78 36
 LT978_09410 NONE
 LT978_09415 1834886 .. 1834920 + -15.1  -3.48276   GTCCAGCCGAGGTAA    GACGG-AGCCGGCTGA AGAT TCAGCCGGCTTCCGTA     TTGTCTGGGAAAGAC 100 26
        deoD NONE
 LT978_09430 1836813 .. 1836838 +  -7.6  -4.67607   GTGTAATGAGAAGAA         GCCCGCTT GAAAAATAGA AAGCGGGC          TTTCTTTATTACCAG  83 35
 LT978_09445 1839452 .. 1839480 +   -11  -4.98531   ATGAAATAGTAAAAA        CACCCGATGCGT CGCTC GCGCATGGGGTG        TTTTTGGTTTGCGAA  93 32
        bglA 1841935 .. 1841962 +  -5.5  -4.89339   AAAGGTGTAAAAAGG        GAAGGCTTCAC CGTTGT GTGAAGCCGGC         TTTTTATCAGTAATT  76 39
 LT978_09460 1843548 .. 1843569 + -15.9  -5.47159   CACAAAAAGTAAAAA           GCCGGCACA TCGA TGTGCCGGC            TTTTTTCTGTTAAGC 100 29
 LT978_09475 NONE
 LT978_09480 1846988 .. 1847015 + -16.4  -4.56883   GATTCCTATAAAAAA        CCCTTAGTCTGC TTAA GCGGACTAAGGG         TTTCTTTCATCTTAC 100 30
 LT978_09490 1848106 .. 1848132 + -13.8  -3.25304   CACATGTGATGAATA         ATAAAGGCTGCC CAA GGCAGCCTTTAC         TTAATGATAATGTTT 100 25
 LT978_09505 1849406 .. 1849426 + -11.8  -5.80817   TTATTAAAGAAAAAA            CGGCCTGC ATCGC GCGGGCCG            TTTTTTTATCTTAAA 100 34
        rarD 1850896 .. 1850909 +  -6.7  -2.58253   AAGCCGCTAAGCCTT               TCGCT TTCC AGCGA                TAGCTTAAATTATGT  56 31
 LT978_09520 NONE
 LT978_09525 NONE
       bshB2 1852275 .. 1852300 + -13.4  -5.71712   AGACTGATAAAAGAA         GGGATAAGGC TGAAAT GCCTTATCCC          TTTTTTTGTGTCAGG 100 34
        cdaS 1855460 .. 1855475 +    -4  -5.10968   ATTTAATATTAATAA              GGTGAA CATC TTTACC               TTTTTCTGTATTGGT  73 65
 LT978_09550 1856760 .. 1856785 + -13.3  -6.11392   CTGTAATCAGCCGTC         ACCCGCTTCCT TTAT AGGAAGCGGGC          TTTTTTTGTTTGTTT 100 35
 LT978_09555 1858316 .. 1858327 +  -3.6  -5.95539   TTATTTTTAAAAAAA                GCCT TTCG GGGC                 TTTTTTTGTTTACCA  93 31
 LT978_09560 1858984 .. 1859010 +  -6.6  -5.23316   GCCCGCAGGGAATGA         GCCCTTTTGTAT TGA GTATACAAGGGC         TTTTTTAGTATACTC  88 26
 LT978_09565 NONE
 LT978_09570 1861868 .. 1861892 +  -7.9  -4.85177   AACTGCTTCATAAAA          GCATAGGATAG GCT TTTTCCTATGC          TTTTTCCTATGCTTT  84 15
        sucA NONE
        odhB 1866233 .. 1866258 +  -9.1   -5.4505   TGAAACAGACAAAAA         GTACACTGC CCTTACAA GCAGTGTAC          TTTTTTATTGAGCGA 100 43
 LT978_09585 1867026 .. 1867056 +  -9.1  -3.23274   GATCTGCAGAATAAT      CAAGGATAGG-AGC GGCG GCAGCCTATCCTTG       TTCAGTTATGAAAAC  72 17
 LT978_09595 1869585 .. 1869607 +   -17  -5.14563   AGACCAAAAGAAGCA           GGCCCCCGTT CAA GACGGGGGCC           TTTTTTAATAAAGCG 100 39
 LT978_09615 1874311 .. 1874322 +    -3  -4.18197   GAAGAAGTTTAAGGC                TGAA TGAA TTCA                 TTTTGCCTGAGCCAT  55 29
 LT978_09620 1874527 .. 1874549 + -11.2  -5.24129   GATGTTTTGTTGAAA           CCGCGGCATT GGA GAAGCCGCGG           TTTTTTATGGCGAAA 100 39
 LT978_09625 1875163 .. 1875188 +  -7.5  -5.25699   TAAATATCACATAAA         AGCCATCCGAA TGCA TGCGGATGGCC          TTTTTATTATATAAT 100 38
 LT978_09640 1876314 .. 1876327 +  -8.1  -4.64676   TAGGGATGGCGACAA               CGGTG CAAT CACCG                TTTTGTTCACCGTAC  81 89
 LT978_09650 1876927 .. 1876963 +  -2.2  -4.59109   CCAATGTCACCATCA    GGGGGAGAAAGCATTG ACCCC CATTGTTTCATCCTCC    TTTTTCGAGGGTATG  61 9
 LT978_09655 1877525 .. 1877546 + -11.7   -5.8187   TCACAATAATAGCAG           CAGGTACAT TCAT ATGTACCTG            TTTTTTTATTCCATA 100 32
 LT978_09660 1878299 .. 1878325 +  -8.7   -5.5208   TTCTAATTGCCATAA         CTCTTGCGCCC CTACA GGGTGTGAGAG         TTTTTTCTATTATAG 100 35
        ssrS 1878688 .. 1878710 +  -9.9  -5.49568   GCATACGTAGCGAAA           GCCATTTCC CTTGC GGAGATGGC           TTTTTATTTTGAATT 100 24
        recQ 1880646 .. 1880661 +  -4.7  -3.53761   CAGAAGCCTGAAAAC              CCTTG CTGTAT CAAGG               TTTCAGCAAGACTTA  56 96
 LT978_09675 1881701 .. 1881727 + -12.4  -5.83226   TCATATAGAGATGAA         GAACACAAGGCG AAA TGCTTTGTGTTC         TTTTTTTCTTCCCTT 100 43
 LT978_09680 1882238 .. 1882257 +  -7.1  -4.22927   GCGTCAAAATAAAAA            GACGGGG CGGTTT TCCCGTC             TTTATGTATTAATGC  76 29
 LT978_09695 1884793 .. 1884815 +  -9.8  -4.62471   CATAATATGACGAAA           GGCCGGGTCT CAA ACACCCGGTC           TTTTTAGGGCTTAAG  89 36
 LT978_09700 1885461 .. 1885495 + -15.2  -3.14132   ATCTCACCGTATTAT     TAAAAAAAAGCCGTGC TCT GCGCGGCTTTTTTCTA     TTGATGGAAAAAGGC 100 23
        czrA 1886747 .. 1886761 +  -5.7  -3.53697   TTTTTAGACAGGGAT               GTCAG CCGTA CTGAC               TGTTATTGGTTTGGT  57 54
 LT978_09720 NONE
 LT978_09725 NONE
 LT978_09730 1889543 .. 1889553 +  -5.4  -3.06915   ATCTGATAAATAATC                 CTGA AAA TCAG                 TTAAATAAACTGCGT  54 28
        csaA 1889950 .. 1889971 + -13.1  -4.28254   CGGATAATAAAAAAA           GACGTTTGC AGAA GCAAACGTC            TTTTGCGTATTGAGG 100 34
 LT978_09745 1892175 .. 1892191 + -10.9  -5.15117   GATTAATAAAAGAAA              GCTCTCT TTT AGAGAGC              TTTTTTCAGATTTTC  93 387
 LT978_09760 1893485 .. 1893507 + -13.5  -3.15027   GCAAATCTTAATGAA           CGGGAAGAG AAAAA CTCTTCCCG           CTTTTCATAGCAGCT  95 30
 LT978_09770 NONE
 LT978_09775 NONE
 LT978_09780 1899982 .. 1900001 +   -15  -5.42259   GCTTCTTAATAGCAG            CGCCCCGA AAAT TCGGGGCG             TTTTTTTACGGCTGA 100 32
 LT978_09795 1901995 .. 1902015 +    -9  -6.09196   CCTTAATCAAAAGGG            GACCTGTC TTTGT GACGGGTC            TTTTTTTGTTTTCGC 100 35
         rtp NONE
        proC NONE
        proB 1904830 .. 1904863 +  -7.5  -5.54885   CTATAAAAATATGAA     AAAGCCCGAGGCTTCG TTT TGAAGC-TCGGGTTTG     TTTTTTATTGATATT 100 48
        gltB NONE
        gltD 1911996 .. 1912013 + -12.7  -4.87626   GGTTTATTTATAAAA             CCGGCTG GGAT CAGCCGG              TTTTTCGTATTGAAA 100 48
 LT978_09835 NONE
 LT978_09840 NONE
 LT978_09845 1915119 .. 1915144 +  -9.1  -4.86385   GCGCGAAATGTAGGG         CTGAATCCTTT AGAA GAGGGATTCAG          TTTCTTTTTCCGACT  91 28
 LT978_09850 1916442 .. 1916470 + -14.7  -4.71382   GCAGAATAAACAAAA        GCCTCATTTCTCA GCT TGAGAAACGAGGC        TTTTTGCCTAGTTAT 100 32
 LT978_09860 1918732 .. 1918752 +  -8.4  -5.88061   AAAGATGAAGACTAG            GACACAAT TTCAT ATTGTGTC            TTTTTTTCATTTTTT 100 26
 LT978_09865 NONE
 LT978_09870 1919755 .. 1919773 + -13.2  -4.75174   CGGCAAGACAGAAAA             CCCCTTGT TAT ACAAGGGG             TTTTTGAGTTGAATA 100 73
 LT978_09880 1922023 .. 1922047 +    -5  -5.40072   TAAGGTTTTACCGCA          CATCGCTC AATTCATAC GGGCGATG          TTTTTTTAGAGAAGG  82 38
 LT978_09885 NONE
        dacB 1924593 .. 1924615 +   -12  -5.25893   AAATCAATAAGAAGG           GCCGGATCCT TAG AGGGTTCGGC           TTTTTTGATGTCTGT 100 31
 LT978_09895 NONE
 LT978_09900 NONE
 LT978_09905 NONE
 LT978_09910 NONE
 LT978_09915 NONE
 LT978_09920 1963186 .. 1963215 + -10.1  -5.67283   CATAAAACATAAAAA       GTCCTGAAGCG TTTTGATT CGCTTTAGGAC        TTTTTTCTTTCCCTT 100 19
 LT978_09925 1964868 .. 1964889 +  -8.8  -6.06723   CCATTATTAATAAAA           CTGACAGT TGCGGC ACTGTCAG            TTTTTTTTTGCGGCG 100 41
 LT978_09930 NONE
 LT978_09935 NONE
 LT978_09940 NONE
 LT978_09945 NONE
 LT978_09950 NONE
 LT978_09955 NONE
 LT978_09960 1972667 .. 1972705 +   -11  -5.04987   GTATAAATAAAAAAA   GACTGCATAGATCCGGCT CGC AGCCGTTCTTATGCAGTC   TTTTTTCACAGTCTT  93 35
 LT978_09980 NONE
        bioA NONE
        bioF NONE
        bioD NONE
        bioB NONE
 LT978_10005 1981406 .. 1981417 +    -3  -2.73875   ATTTTCTTGATTTTT                GTAA GCGC TTAC                 TAATATTGAGCAGAA  42 288
 LT978_10010 NONE
 LT978_10015 NONE
 LT978_10020 1984303 .. 1984314 +  -4.4  -3.50251   ACCAAAATGAGGAGG                TGCA GTCA TGCA                 TTCATTGCTTATTGA  53 31
 LT978_10025 1985116 .. 1985134 +  -8.8  -5.64274   ATATTTTTTAAAAAA             CAGCCGCT CTG AACGGCTG             TTTTTTTATGCCTGA 100 46
        bamD NONE
        bamA 1998817 .. 1998830 +  -3.9  -2.50607   TTCTATTCAATTGAA               CTTTT AGGG AAAAG                CATTATTTCTTTAAA  44 19
 LT978_10040 NONE
 LT978_10045 2022915 .. 2022940 +  -9.7   -5.4505   TGATCAAGTGTAAAA         CGCCGCTGG CCTGGCAC TCAGCGGCG          TTTTTTATTAAAAAG 100 42
 LT978_10050 NONE
 LT978_10055 2026103 .. 2026140 + -13.1  -4.52589   GCATCAGCATTGCAT   TAAGCCAATTTTCTT ACTCGGAA AAGAAAATTGGCTTA    TTTTCTGTGGGAGAG 100 43
 LT978_10060 NONE
 LT978_10065 2028355 .. 2028381 +  -7.3  -5.31545   GCTATACAAAAAAAA         CGGTTCTGCTG ATTAA TAACAGAACCG         TTTTTTCCTATTGTT  91 43
 LT978_10075 2030614 .. 2030637 + -12.5  -4.90381   TTAGTTAAGCTTTAG          GCGGACATC AGCAAC GATGTCCGC           TTTTATTATCTTAAA 100 37
 LT978_10095 2033465 .. 2033478 +  -5.3  -2.70298   CTTTTTCGCCGTCTG               CTTGT CAAA ACAAG                ATTCTGCTTACGCGC  48 410
 LT978_10155 2045914 .. 2045934 + -16.9  -5.95449   AGCTAAATAGTAAAA            CCTCCGCTC AAT GAGCGGAGG            TTTTTTATTTTATTT 100 185
        plsY 2051910 .. 2051924 +  -2.8  -4.13945   GAAGATCAAATGGTT               TTGATG AAA CTTCAA               TTTTGACATCAAAAT  55 22
 LT978_10180 2052295 .. 2052313 +  -8.9  -5.75945   TTACGTGTAAAAAAA             GAACGCA GCGGA TGCGTTC             TTTTTTTTACAGCCT 100 31
        sspO NONE
 LT978_10225 2057672 .. 2057687 +  -4.7  -5.63504   CCACGATATGTAAAA              CAGAC CCCGGT GTCTG               TTTTTTTGTGCCATT  85 28
 LT978_10230 2058145 .. 2058172 + -12.1  -5.26316   CTATAACATAAAAAA        GCCGCTTTCAT CCCTCA ATGGAAGCGGC         TTTTTTGTCCGGTCA 100 35
 LT978_10235 2058802 .. 2058822 + -11.2   -4.4773   TGCTCAAATAAAAAA            CCTTTCCG GCGGA CGGAAAGG            TTTTAATTCATCTGA  90 30
 LT978_10255 2060934 .. 2060958 + -10.2  -4.84761   AACATGACGCCAAAA          TAAAAAACCC TCTCC GGGTTTTTTA          TTTTTATAACCATGT  91 34
        lexA 2066157 .. 2066171 +  -7.1  -5.47218   ATTTATCGTAAAAAA               CCCCT CTGTA AGGGG               TTTTTTTGCATAAAA  91 55
 LT978_10300 2067491 .. 2067506 + -10.4  -4.14792   GAAAAAACATAAAAA              GGAGGC AATC GCCTCC               TTCTCTTTTTACTTT  85 29
 LT978_10325 2072931 .. 2072973 +  -2.7  -5.24531   ATAGGATCTCAATAT CAGGATCATCTTCTCTC TTTTCTATC GGGCGGGTATGATCCTG TTTTTTATACCGAAT  73 37
 LT978_10330 2073284 .. 2073303 + -10.7  -5.34365   TATCAACACTTTTTG            CACCCGG TAAATC CCGGGTG             TTTTTCTTATTATGG 100 48
 LT978_10335 2074095 .. 2074114 +  -9.3  -5.50723   TTAATTCAGAGAAAA            CTTGCGG CAACGC CCGCAAG             TTTTTATTTTGATAA 100 37
 LT978_10340 2075020 .. 2075046 + -12.4  -3.05832   CTCCATGATCGTACG         GCGCCATAAATG AAA TGTTTATGGCGC         TCTGCTGTTTTTCCC  87 76
        adhP 2083307 .. 2083331 +   -10  -3.93985   CTTCCTAATCATTAA          GGCTGCCG GGAATGATA CGGCAGCC          TTTGATCTCTATTCT  83 33
 LT978_10405 2086485 .. 2086510 + -16.3  -4.10007   TCTAAATTCCGTTAG         GAAAGTCGGCA GTTT TGCCGACTTTC          TTTTCCAAGCATTCT 100 36
 LT978_10410 2087131 .. 2087152 +  -9.5  -5.18355   CTTAGTTCGGACAGA           CGCCATAAG AAGT TTTATGGCG            TTTTTACTTTTTAAA 100 81
 LT978_10430 2095169 .. 2095186 +  -6.3  -5.92399   CTTCTATGTTTTACG             CTCATCT TTAA AGATGGG              TTTTTTGTTTTGTTA 100 51
 LT978_10445 2100076 .. 2100097 +  -3.8  -5.86061   ACGTGTCCTCAATTA           TGGAGTTA GATTCA TAACTTCA            TTTTTTTTGGTCAAG  93 125
 LT978_10475 2106816 .. 2106848 +  -7.7  -5.64873   GACTAAATGAAAAAA     CCCCTGCTC-TCCC TTTTTT GGGACGAACGGGGG      TTTTTTGTTATTGAA 100 35
 LT978_10525 2114006 .. 2114022 + -10.1   -4.9725   AAGACAATTAAAAAG              GGCTCCT TTC AGGGGCC              TTTTTATATAGGCCT  93 39
 LT978_10530 NONE
 LT978_10535 2114905 .. 2114915 +  -2.4  -4.57341   CGTGAAATCATACAT                 GAGG ACT CCGC                 TTTTTGCGCCAACTT  63 115
 LT978_10555 2118064 .. 2118093 + -16.5  -4.62783   TTTTTATCATGAGAA       CGGGGTCGTCTGC ACCG GCAGATGACTCCG        TTTTTCAGGTGAATA 100 43
 LT978_10560 2118612 .. 2118629 +  -7.7   -5.9003   AATAAAAAGAAAAAA             CGCCGCTG ATT CAG-GGCG             TTTTTTTATTGGTTT 100 36
 LT978_10575 2121491 .. 2121510 +   -15   -3.6914   TGTTTGTGAAAAAAG            CGGCCGGA TTGC TCCGGCCG             TTCTCTATTACCGTT 100 132
 LT978_10645 2193917 .. 2193939 + -13.5  -3.09933   AAGAACTAAATGTAA           GGGGGACTA ATTAC TAGTCCCCC           TTGACTAACTTGCGG  95 32
        rpmB 2322414 .. 2322438 +   -10  -5.31456   ATAAGCAAAAATGAA          CGCCTGCC CTTTTATGC GGCAGGCG          TTTTTTATGCGTTCA 100 37
 LT978_11360 2341864 .. 2341900 + -14.6  -5.49234   CTGAAAAAATAAACG    CACCTCCAAGCTGA AACCCGCAC TCGGCTTGGAGGTG    TTTTTTATTACGTAT 100 29
 LT978_11615 2400362 .. 2400390 +  -7.5  -4.36343   GTTTGACGGTTCCCG       GCAGATTGGCGG AATGCA CC-CCGATCTGC        TTTCTTAATTCCTTC  76 383
 LT978_11635 2402959 .. 2402979 +  -8.3  -4.99134   GAATGCGTAAAAAAA            GCACCTG CCTGTAT CAGGTGC            TTTTTACTTTCAGCT  90 31
        ylbJ 2406180 .. 2406209 +  -7.9  -3.90889   GCACGGACAAAAAAA       GGATGAGACGC CGATCAGC GCTTCTCATCC        TTTAAATTTCTGCTT  74 20
 LT978_11700 2411302 .. 2411322 +  -9.8  -5.60993   AAATGTAATAAAAAA            GTACAGCA TATTC TGCTGTAC            TTTTTTTATGAGACG 100 33
        ctaA 2418583 .. 2418606 + -13.9  -4.70659   TGAGGCACATGAAAA          GGCCGAAGC ATCAAA GCTTCGGCC           TTTTTACATATAACA 100 38
 LT978_11760 2425567 .. 2425577 +  -3.2  -2.72829   CTTCACGCTGCCGGA                 GACG GTT TGTC                 CTTTAAACCGCTCTA  42 89
 LT978_11770 2427608 .. 2427637 +   -10  -4.53439   AACCGCCAGTAAAAA       GCAGCGCCCG-CT CCAAA AGAAGGGCGCTGC       TTTCTTTCCCTTTGG  89 29
 LT978_11775 2427917 .. 2427966 + -15.4  -3.66999   AACTGAAAAAATAAA CCGCAATA-AAAAATGACC-CGCC GGAA GGCAAGGTCATTTTTTTATTGCGG TTTAGCTGACTGGCT 100 27
 LT978_11790 2430527 .. 2430547 + -14.1   -5.1101   ACAATATCTTATGAA            GCCTGAATC AAA GATTCAGGC            TTTTTTACCTCCTCA 100 79
 LT978_11795 2431413 .. 2431439 +  -8.1  -5.47218   AGTAAACGGATAAAA        CGCCCGG-T-CAT GTC ATGCAGCCGGGCG        TTTTTTTAAATCAGC 100 36
 LT978_11810 2433811 .. 2433832 + -14.5   -5.4251   TTGTAAACAAGAAAA           GAGACCGGA GAAA TCCGGTCTC            TTTTTTATATCTGAA 100 35
 LT978_11830 2436287 .. 2436307 + -11.8  -4.59984   CTCATAACATAAAAA            GCGGGCCG ATTGC CGGCTCGC            TTTTGTCTACATTTT 100 34
 LT978_11840 2438243 .. 2438268 + -13.3  -5.16472   CAATAAACATAAAGA         AGCCCGAAACG AAAT CGTTTCGGGCC          TTTTTTACGCTTTTT 100 35
 LT978_11855 2439933 .. 2439960 + -15.6  -4.69214   CTTGCACAATAAAAA        CAGCCCCCGCTT TTAT AAACGGGGGCTG         TTTCTTTGTTACATC 100 29
 LT978_11930 2500196 .. 2500221 + -11.8   -4.0825   TATACACCATGAAAA         TCGGCCGGCC TGCTTT GGCCGGCCAA          TTGTTTCGTTGCGCC  90 44
         def 2500845 .. 2500876 + -20.4  -4.41348   GCCATTGACCGTTAA      GAAAACCGGCACTT CCCA AAGTGCCGGTTTTC       TTTATTTCAAAAGGC 100 26
 LT978_11945 NONE
        rnjA 2503894 .. 2503914 + -11.2   -5.7946   GGAGGTCTAAAAAAA            CTGCACTC ATTAC GAGTGCAG            TTTTTTTATTGCAGC 100 31
       mreBH NONE
 LT978_11985 2510582 .. 2510601 +   -10  -5.05505   TGAATCACCCGTAAA            GACGCAGC AAAA GCTGTGTC             TTTTTCGTTTGTGCT  93 27
 LT978_11990 2511922 .. 2511939 +  -8.4  -5.33026   ATTTTAATAAAAAAA             GGAGGC GATCAG GCCTCC              TTTTTATTTCGCTTC 100 34
 LT978_12005 2515019 .. 2515048 + -14.3  -5.58522   TTTGCCAAATAAAAA       CGCC-TGCTGTCCG AAT CGGGCAGCGCGGCG       TTTTTATTTTGTCTG 100 29
 LT978_12080 2528964 .. 2528984 +  -9.7  -4.99972   GAAAACGCAAAAAAA            CTGCTTGAG TAA CGCAAGCAG            TTTTTACTGTTTTAT  93 14
 LT978_12095 2531596 .. 2531626 + -12.1  -4.75404   CGCTTCCGCCGAATA      GAAAAA-CCGAAGC GTAA GCTTCGGTTTTTTC       TTTTTAATGAAATTT 100 25
 LT978_12170 NONE
 LT978_12175 2543508 .. 2543525 +  -2.8  -4.24342   CAAGGGTGACCATTA             TAAGAT AGAAAG ATCTTA              TTTGTTAATGGAACG  58 18
 LT978_12180 2544897 .. 2544924 +  -9.2   -4.9218   AATAAAGGAAAAAAA        TGCGCCCTTTTC ATCA GAAAAAGGCGTA         TTTTTATAATCAATA  91 39
 LT978_12185 2545486 .. 2545506 + -13.3  -5.48063   TTCCGCCGCAAAAAA            GCCGATGCG TCA TGCATCGGC            TTTTTTCTATTCAAT 100 41
 LT978_12195 2546817 .. 2546845 +  -2.5  -5.60993   AGATCATGATACAAT        GAAGACAATCA TTTCAGC TGGTTGTCTTA        TTTTTTTCTGAAAGA  80 68
 LT978_12200 2548146 .. 2548164 + -10.3  -6.01369   TGCAGACTATTTAAA             CAACGGC ATAAC GCCGTTG             TTTTTTTATTGTTTC 100 27
 LT978_12215 2553427 .. 2553446 + -12.2  -5.36441   AAATAAATAAAAAAA            GATTGCCC CGGC GGGCAATC             TTTTTTATGTCGAAA 100 35
 LT978_12225 2554275 .. 2554319 +  -2.4  -6.15828   TGAAATCTCTGAATC GAGGATGTTTTCGTAAA TCTCTTGGATTT TTTACGATA-CATCCTC TTTTTTTTTGCTAGA 100 112
 LT978_12305 2572652 .. 2572667 + -10.4  -4.63184   ATATCCCGCACAAAA              GCTGCC GCCC GGCAGC               TTTTTCAAATGAATT  89 68
        clpE 2580654 .. 2580679 +   -14  -5.85425   CACAATAAGAAAAAA         GCGGCTCCCT CCTCGC GGGGAGCCGC          TTTTTTGTTTCTTTC 100 33
        motA NONE
        motB 2582398 .. 2582419 +  -8.7  -5.73978   CAGTAATATAAAAAA           GGAAGCCTT TCAA ATGGCTTCC            TTTTTTATTTCTGAT 100 35
 LT978_12365 2584593 .. 2584609 + -10.1  -5.63517   TCACGATGAAAAAAA              CACCCTG GGT CGGGGTG              TTTTTTATTTAAAGA 100 32
 LT978_12400 2590944 .. 2590970 + -19.6  -5.41143   GACTGCACTGTTTCA         GCCTCCTTCTCT TTC AGAGAAGGAGGC         TTTTTTTCGGGCGTA 100 291
        mtnK NONE
        mtnA 2593295 .. 2593325 +    -9  -5.71712   TGAGCTGAAAAACCG       CTGATGATGTTGCC TCG GGCAATGTCAGCGG       TTTTTTTGTCTGCAC 100 33
 LT978_12430 2597528 .. 2597557 + -18.1  -6.04324   CGAAATAATGCAAAA       TACCTCTTAAGCG TTGC CGCTTAAGAGGTA        TTTTTTATTTTTTGC 100 33
 LT978_12455 2601776 .. 2601795 + -12.8  -5.21709   CATAACGCTTCTTCG            CCCCGGTG TCTG CGCCGGGG             TTTTTTGCTGTACAA 100 43
 LT978_12460 2602097 .. 2602118 + -12.3  -4.53036   CAATAATGCAGCTTA           TTCGCCGGG ACTT CTCGGCGAA            TTTTGATATTTATCG 100 35
 LT978_12485 2607413 .. 2607423 +  -2.4  -3.23692   ACGACCAGACAAAAA                 GCCG GAA CGTC                 TTAATCATGGTGCTG  45 11
 LT978_12490 2609259 .. 2609281 +  -9.2  -4.24948   GCAAATCAAGAGAAA           GAGCTGAC GCTTTTG GTCAGCTC           TTTTCAGTCTGATAC  85 19
        tnrA 2611578 .. 2611599 + -10.1  -5.60993   CCGCTGATCAAAAAA           GTCCGCCTC CTGT GAGACGGAC            TTTTTTTATAAAGCA 100 34
 LT978_12535 NONE
 LT978_12540 NONE
 LT978_12545 2618359 .. 2618396 + -13.5  -3.72756   CATTGTTGTTTGTAT   AAAAACAGGCCGCCGGA GTGA TTCGGCAGCCTGTTTTG    TTATGTATGTTATTG 100 24
 LT978_12555 2620735 .. 2620760 + -16.3  -5.49234   CATTTTGAAGTTAAA         GCCTCTTTCTC TCAT GAGAAAGAGGC          TTTTTTGTTACATCT 100 342
        metE 2623091 .. 2623117 + -15.2    -5.252   CTTGTATAATGAAAA         CAGCCATCCGTA AAT TGCGGGTGGCTG         TTTTTTCTGGGCGTG 100 32
 LT978_12570 2625101 .. 2625115 +  -4.2  -3.25824   CGATCACATGTCCCG               CTGTCA TTT TGACCG               ATTTTGTGAATGCTG  52 56
 LT978_12575 2626391 .. 2626415 +  -6.5  -5.26875   GAACATGCAAAAAAA         GGATCAGGCG TTTGTC CGC-TGATCC          TTTTTTAATTGAGAC  88 43
 LT978_12600 2629729 .. 2629755 + -15.3  -5.22006   CTGCACAGCAAAAAA         TAAGGATGCCC CGAAT GGGCATCCTTA         TTTTTATTCTGCTGC 100 23
 LT978_12645 NONE
 LT978_12650 2638178 .. 2638205 +   -10  -5.38047   AGGTTTAATCAAAAA        GAAAGCTGAC TTTATATT GTCAGCTTTC         TTTTTTGTATAAATG 100 33
 LT978_12705 2650923 .. 2650942 + -12.2  -5.36441   TCTTCTTAACAAAAA            TCCAAGGC AGCC GCCTTGGA             TTTTTTATATACAGA 100 32
 LT978_12710 2651248 .. 2651274 + -18.1  -4.16284   TATTTTACATAAAAG         CACCCTGTCCG CTGGC CGGACAGGGTG         TTTGTTAAGACATAT 100 81
 LT978_12730 2657184 .. 2657204 +  -6.8  -5.93809   AAAAACTGACAAAAA            CGGTTCCT TTTAC GGGAGCCG            TTTTTTTTCTGGCAA 100 32
 LT978_12735 2658091 .. 2658107 +  -4.5  -3.08201   CGTAACGAGGGGTTA              TAATGGA TAC TCTATTA              CTTTTAACGATATTA  50 36
 LT978_12740 2659098 .. 2659117 + -12.2  -5.60993   TTTTTCTGATGACAT            CCGCTTCT TTAC AGAAGCGG             TTTTTTTGTGACAGG 100 32
 LT978_12745 NONE
 LT978_12750 2660119 .. 2660148 + -11.6  -3.94773   AAAGCTTGATTACAC       TAAGGACAGGAG ACACGG CTCTTGTCCTTA        TTCCTTTTTTCCATA  90 32
 LT978_12755 2660330 .. 2660360 +  -8.3  -6.09888   TAAAAAAGAAAAAAG       GCTGAATCCCG CAATGTGAA CGGGACTCAGC       TTTTTTTTGTTAAAG 100 21
 LT978_12940 2687764 .. 2687789 +  -2.6  -4.85782   CTTTAAACTGCTTAA         CGTTCAGC CGATATAAAA GCTGAATG          TTTATTTTTAAAAGA  67 53
 LT978_12945 2688615 .. 2688631 +  -8.7  -2.97475   CTCCAGTGAATGTAA              GAACGGG CCC CCTGTTC              ATTTATCATAAAAAC  63 165
 LT978_12960 2689730 .. 2689750 + -11.1  -4.78572   GTATGTAAGAAGAAA            CGGAAGCCC GGG GAGCTTCCG            TTTTCTTGATTACAG  91 33
 LT978_12980 2692801 .. 2692835 +  -4.9   -5.9218   ATAATCCGGCCATCA     TCCGCCGATCTGC GAAATAACA GCAGGCAGGCGGA     TTTTTTTGTTCTGTA 100 37
 LT978_12985 2693708 .. 2693726 +  -5.3  -5.63517   ATTAATCTAAAAAAA            GCG-TCCT TTAC AGGATCGC             TTTTTTATTTGGGAA  86 31
 LT978_13095 NONE
 LT978_13100 NONE
        fetB 2721498 .. 2721539 +  -3.8  -3.00946   CACTGGCAATTAAAA AAATTCAGCAGGGAAG CGTAAGCTTT TTTCCCTGCTGAATGG  TGGTTTATGACAAGG  47 5
 LT978_13115 2722729 .. 2722754 +  -8.3  -3.93984   AAACATATAACAAAA         CAGGCAGC-CGT CCG GTGCGCTGCCTG         TTTCTCAATCAATTT  77 31
 LT978_13140 2729566 .. 2729580 +  -9.2  -5.52384   GATAACGCAAAAAAG               CGGCCT CCC GGGCCG               TTTTTTTCATAGACA 100 36
 LT978_13145 NONE
 LT978_13150 2730276 .. 2730298 +  -9.8  -5.77853   TGAAAGTGTAAAAAA           GATGCCGGAT GAT AACCGGCGTC           TTTTTTTTGCCCATT 100 30
 LT978_13160 2731877 .. 2731899 +   -15  -3.18383   GCACCTCATAAAAAA           GCCCTCTTTT TAA AAAAGAGGGC           TTGCTAAATAGGACT 100 222
        lacG 2735337 .. 2735380 + -14.2  -3.37685   AAAACAATCATTTAA CGATCATACATGATGAAAAGA ATC TCTTTTCATCATGTGTGC-CG TCTTTAGGAGGTTTT 100 26
 LT978_13180 NONE
 LT978_13185 NONE
 LT978_13190 NONE
        galE NONE
        galT NONE
 LT978_13205 2742295 .. 2742316 +  -7.3    -5.252   TGATGCAATTCTAAA           GCAGGCT CTTTTCGC AGCCTGC            TTTTTTGTAAGGCTG  91 42
 LT978_13210 2743029 .. 2743058 +  -5.7  -5.05079   CGGAATAAAACCATA       GGCAGCCCCGCT CCATGAA AAC-GGGCTGCC       TTTTTATATCCTTCT  78 33
 LT978_13215 2744588 .. 2744604 + -12.3   -4.2828   TTTCAAAGTAAAAAA              CCCTTGC GCA GCAAGGG              TTTTAATGAATGAAA  95 47
 LT978_13270 2752374 .. 2752389 +  -3.3  -5.90231   TCGGTATGAAAAAGA              GCATT TAGTTT AATGC               TTTTTTTATGTTTGT  91 18
 LT978_13275 NONE
 LT978_13280 2754326 .. 2754345 + -12.2  -2.62958   TCTTTAAAGACTTTA            TCCCCTTC TTTT GAAGGGGA             AGTTTTATTAAAATC  85 59
 LT978_13305 2758613 .. 2758630 +  -9.9  -4.98758   TGAGTTATAAGGGGA             CAGGTGA TTTA TCACCTG              TTTTTATACATTTTT  93 31
 LT978_13335 NONE
 LT978_13340 NONE
 LT978_13345 2764994 .. 2765020 + -11.6  -4.55295   ACAATAAAATCAAAA         GCACTCCTGTTG ATA TGGCAGGAGTGC         TTTCTTTATGAAAAC 100 34
 LT978_13350 NONE
 LT978_13355 NONE
 LT978_13360 2766839 .. 2766864 +  -7.5  -3.92369   AAGAGATAAAAAAAG         CCGGCACTC-CG TAA TGAGAGCGCCGG         TCTTCTTTTTTACGT  74 32
 LT978_13375 2770354 .. 2770379 + -19.1  -3.32844   CACTCAGGATATAAA         GAACCCGGCAG ATCA CTGCCGGGTTC          TTCTCACATAAAAAG 100 27
 LT978_13400 NONE
 LT978_13405 NONE
 LT978_13410 2773441 .. 2773479 + -13.4  -4.39426   ACCCTTGTCCTCTAA   AAAGAAAAAGCAGAGC TAAAAAT GCTCTGCTTTTTCTTA   TTTTCTCCGCATATG 100 26
 LT978_13415 NONE
 LT978_13420 2774683 .. 2774709 +  -8.1  -5.04175   AAAGCATAAAAATAA        GCTGCC-GGATT AAAG AATTCAGGCAGC         TTTTTGTATGGTTAA  91 46
        prpE 2784616 .. 2784641 + -11.2  -3.76775   CAGGCATGAAAAAAA         GCCCGAAACCG GTAAA CGGTT-CGGGC         TTTACATGTGTTCAA  84 32
 LT978_13500 NONE
 LT978_13505 2788794 .. 2788819 +  -6.9  -5.41143   AGTATTACGCGTAAA         CCAGAGAGGC TTCCTTC GCC-CTCTGG         TTTTTTTGCGGAGTG  91 27
 LT978_13510 2789407 .. 2789422 +  -2.6  -2.58544   GTCAGAAGCGGAGGA              TCGATCA TAT TGA-CGA              ATTATCAGCATGAGC  41 13
        spxH 2790324 .. 2790345 +  -4.3  -5.61596   TGACCATTAAAAAAA           GCTGATTCC TTAC GGAGCCGGC            TTTTTTTGTGCAAAT  84 31
 LT978_13520 2790777 .. 2790799 +   -12  -5.15969   GGGGTTTTAGAAAAA           GCCTGCGCAT TTA ATGCACAGGC           TTTTTTGAATTACGA 100 31
 LT978_13545 2795772 .. 2795795 +  -8.2  -4.71382   GAAAAATAACAAAAA          GCCC-AAACCG CGA TGGTTTTGGGC          TTTTTCCATGCTTAT  87 32
        trpS 2805726 .. 2805747 +   -13  -5.64006   AGAAGATAAAAAAAA           GAGGCGGG AGAATC CCCGCCTC            TTTTTTTAGTTCACT 100 32
 LT978_13640 2816349 .. 2816370 +  -8.7  -4.58283   TTTATCTACGTTTTG           CACCGTGCT TGTC AGCACCGTG            TTTTTGCCGAGATTC  83 463
 LT978_13665 2819027 .. 2819042 +    -9  -5.80817   CATTAAATAAAAAAA              CCTGCT ATTC AGCAGG               TTTTTTTGTGTTCAC 100 35
        fosB 2831667 .. 2831717 +  -4.2  -3.73647   TATATGCAGACAAAA GAAAA-GCACCTCCAAACTTTAGG ATGTA CCTAAAATCCGG-GGTGCATTTTC TTATTACTGAATCCC  57 80
 LT978_13735 NONE
 LT978_13740 NONE
 LT978_13745 2834228 .. 2834256 +    -3  -5.85244   AAATTGCAATAAAAA       AAGGCGCCC-CGT TTAG ATGAGGGCGCCGC        TTTTTTATTTTACTT  90 29
 LT978_13760 NONE
 LT978_13765 2836736 .. 2836766 +  -7.7  -5.00616   TCTGTAAAAGCAAAA      CAGCCCTCTTGTCT TAGG AGA-AAGAGGGATG       TTTTTTGCGCACGGA  86 34
 LT978_13785 2841313 .. 2841331 + -10.4  -6.04953   ACAAATGATTACAGA             GTCTTCTT CTT AAGAAGAC             TTTTTTTATTTCTCT 100 269
 LT978_13790 2843234 .. 2843255 +   -13  -4.77036   ATTGATGCGGAAGAG           GCCGCCTG ATATGA CAGGCGGC            TTTTTCATGGTACGA 100 36
 LT978_13795 2843768 .. 2843781 +  -2.3  -4.94168   CAAAAGCCCTTGGCA               TCCCT TATA AGGGC                TTTGTTTTGTTATCT  66 47
 LT978_13800 2844663 .. 2844679 +  -7.3  -2.63913   CCTCGGCATCCTGAA              TCAATGC TCG GCATTGG              TGATGTGGGGTGCTG  59 80
 LT978_13805 2845280 .. 2845302 +  -9.2  -5.27477   ATGAATCATAAAAAA           GCAAAGGC ATGCCGG GCCTTTGC           TTTTTTACTTCGAAT 100 30
 LT978_13825 2849994 .. 2850022 +  -7.5  -5.71983   AAGGGATTGCATAAA       CGCCCCGAGCTTC GTTAA GAAGC-CGGG-CG       TTTTTTTATGCTTGC 100 27
 LT978_13840 2853417 .. 2853449 + -16.3  -3.12471   GGCACCGCATAACAA      ACAGGCGGCACCTTT TAA ATAGGTGCCGCCTGA      TGTATTCAGCTTTGT 100 29
 LT978_13855 2855478 .. 2855498 +  -7.5  -4.19215   ATTTATGTATAAGAC            CCGGCATGT GTA AAGTGCCGG            TGTTTTTTACGTCTA  75 67
 LT978_13860 NONE
 LT978_13865 NONE
 LT978_13870 2856735 .. 2856747 +  -4.1  -3.25166   TGGTGAAATGAAAGG                TGATG ATC CGTCA                TGATTTTTACAGTGA  49 10
 LT978_13875 NONE
 LT978_13880 NONE
 LT978_13885 2857580 .. 2857606 + -11.7  -4.41895   GGAAACGCCTAAAAA        GCAGCCGCTCTT TCAG AAGAG-GGCTGC         TTTTGGTTCAGCGTT 100 29
 LT978_13915 NONE
 LT978_13920 2871219 .. 2871247 + -11.8  -4.85782   GTCATAGACGGCAAA        CCCCGTTCTTTC AACAG GAGAGAATGGGG        TTTATTTTTCGAGCC 100 65
 LT978_13925 NONE
 LT978_13930 2873239 .. 2873274 + -11.8   -5.9362   GGAAAAGCGGGCGAG    GTTTCGGAGTAGGGTG CACT CACCCATCTCCGGAGC     TTTTTTTGTGTTTTC 100 14
 LT978_13935 2874590 .. 2874607 +  -9.9  -5.63517   ATCCGAATAAAAAAA             CACGCAT CCAT ATGCGTG              TTTTTTATTTGAACA 100 40
 LT978_13960 2878504 .. 2878517 +  -3.8  -4.67038   GCGACCATTTAAAAA               GCAG CCGGGC CTGC                TTTTCCTTTTCAAAA  66 29
 LT978_13965 NONE
 LT978_13970 2880270 .. 2880283 +  -5.2  -3.21747   AAACAAATCAGCGCA               GCCG AAAAGG CGGC                TTAATGATAAAATAG  52 8
 LT978_13975 2880651 .. 2880672 + -13.1  -6.02919   ATCCATTTAAAAAAA           CAAGCCTCT TTAA AGAGGCTTG            TTTTTTTATTTCTCA 100 31
 LT978_13985 2881950 .. 2881967 +  -7.7  -5.49809   CGTTTAATAAAAAAA             CAGCCCT CCTC AGGGTTG              TTTTTTTAACATTTC 100 122
 LT978_14005 2884027 .. 2884046 + -12.2  -5.55698   AAACAGAGTGAATAA            GCCAATCC ATAT GGATTGGC             TTTTTTTACATTATC 100 26
 LT978_14015 2886568 .. 2886584 +  -6.6  -5.55855   CCAAGATTGACTAAA              CCATTC TGTAC GAATGG              TTTTATTTTTTTACG  90 31
 LT978_14020 2887987 .. 2888014 + -16.4  -4.88228   GAATAAAGATAAACC        GACCGGCCTTTT TCAT AAAGGGCCGGTC         TTTTTAATGTTAACT 100 35
 LT978_14025 2888675 .. 2888691 +  -2.3  -3.05844   AGCTGATTTTAGTCA              TCATGAT TAC ATCATCA              TATTCAGATACAGCC  43 35
 LT978_14030 NONE
 LT978_14035 NONE
 LT978_14040 2891825 .. 2891845 +    -9  -4.57341   GAATCATAACAAAAA            GGCCCGAA TTAGT TTTGGGCC            TTTTTGGCGAGCATT  86 32
 LT978_14050 2894360 .. 2894384 +  -9.2  -6.04419   GTAAAACATAAAAAA         CCGGCGTCGGC CATG GCCC-CGCCGG          TTTTTTTATTATTTT 100 37
 LT978_14060 2896212 .. 2896230 + -14.6  -4.29396   GATCAGCATGTAAAA             GCGAAGCC CCC GGCTTCGC             TTTTCGTCCGTCATT 100 44
 LT978_14085 2900678 .. 2900712 + -20.8  -5.02074   AGGATATGTGACAAT     AGGGCGCCGCACAATT CTA AGTTGTGCGGCGCCCG     TTTTTTCGGCCGTCA 100 30
 LT978_14090 2902205 .. 2902232 + -15.6  -5.26316   AGGTTAAAATGAAAA        CCCTGCACGGAA TGAT TTCCGCGCAGGG         TTTTTTATGCCATCG 100 34
 LT978_14100 2903679 .. 2903702 +   -11  -5.80364   AAATTTCTCATGCTC          CCCAAACAGC GGAT GCTGCTTGGG           TTTTTTTATTAAAAT 100 68
       fabHB 2904769 .. 2904796 + -21.4   -5.2291   GAAATCAAAAAAAAA        GAGGCGCTGAGC ATCT GCTCAGCGCCTC         TTTTTCTTATGCTGT 100 43
        hmoB 2914358 .. 2914374 + -13.7  -5.21709   AATAGACTGAAAACC              GCCGGAG ATT CTCCGGC              TTTTTTGATGTCCCG 100 31
 LT978_14145 2915908 .. 2915920 +  -3.3  -3.11222   CATGGGAAAAGCAGA                CGAGG GGG CATCG                CTTTTGACGTTAACG  46 78
 LT978_14150 2917123 .. 2917147 + -15.8   -3.6149   CTGACATAAAAAAAA          CAGCCGGTAC ATTAC GTACCGGCTG          TTGTAATTCTTAAAT 100 37
 LT978_14170 2920761 .. 2920779 + -11.8  -5.47218   TCAGAAAACGGCTTG             CCTCATCT TAA AGATGAGG             TTTTTTTGCGTCCGG 100 15
        serC 2922012 .. 2922034 +  -3.5  -4.57569   AACATAACGGTTCCT           TTGATATAC TGTTT GCATATCAA           TTTTTCCGGCCATCG  64 50
 LT978_14180 2922640 .. 2922659 + -12.2  -5.28755   AACCGCATACCGAAA            CCTCTTCC GGCC GGAAGAGG             TTTTTTAATGTGTTT 100 39
 LT978_14190 2923382 .. 2923394 +  -3.3  -5.82388   AAAAGTGCGGGCATA                TTGCG TTC CGCAC                TTTTTTTTGCGGTTT  88 58
 LT978_14195 2924582 .. 2924593 +  -3.6  -5.11881   AGCTCTTCTGTTCTT                CCCT TTCC GGGG                 TTATTTTTTTTCTTT  73 467
 LT978_14205 NONE
 LT978_14210 2925513 .. 2925547 + -17.2  -5.84381   AAACAGGCAAAAAAA     TATGGCTGACGGAGGT CTG ACCCCCGACAGCCATA     TTTTTTTCTTAATAA 100 39
 LT978_14225 2926870 .. 2926897 + -12.1    -5.626   TCTAAATAAAAAAAA        CTGTGCGGGCTC TCAGC GAGCC-GCACAG        TTTTTTTATGCGATG 100 32
 LT978_14260 2934916 .. 2934935 +  -8.6     -3.67   TTATTCCACAGATAA            CAGAAGCT TTCC GGCTTCTG             TATTTTACCGGTTAA  74 26
 LT978_14270 2936256 .. 2936266 +  -3.2  -5.30686   TGTAAAAACAGTATA                 TTCC GGA GGGA                 TTTTTTATGAATATT  75 36
 LT978_14275 2936752 .. 2936765 +  -3.8  -2.95943   GATCCAAGACTTCCT               CTCC AGAGAC GGAG                TGTGATCTGTTTATG  47 7
 LT978_14280 2938000 .. 2938022 +   -15  -5.40072   AATCATAAAAAAAAA           CTGACCTCTT CAT AAGAGGTCAG           TTTTTTTGAGCGGGA 100 33
 LT978_14300 2943691 .. 2943706 +  -3.2  -3.97042   ATCAAACATGCGTTT              TGCGGA TTCA TCTGCG               TTTACTTGATCATAA  58 301
 LT978_14315 NONE
 LT978_14320 2947782 .. 2947794 +  -4.1  -2.76261   ATTTCCTACAAGGAG                CGTGA ACG TCATG                ATTTCGCACTTCAGC  45 107
 LT978_14325 2948008 .. 2948029 +  -9.4  -5.13343   GACTGAAAGCTAAAA           GCTCAGCC GCATCA GGCTGGGC            TTTTCTTTTCCCTTC  91 35
 LT978_14330 2948448 .. 2948471 + -14.6   -4.4009   AATAAATGGCTTACA          GAAGGCGCGG GATA CCGCGTCTTC           TTTTATGCCGTCACC 100 44
 LT978_14335 2948638 .. 2948674 +  -2.1  -2.78405   TCACAGGCATTCTTT    TCCCCGCTGCTTTGAAT GAT ATAATGAGCGGCGAGGA    GGTTTTTTACATGAA  41 7
 LT978_14340 2949315 .. 2949336 +  -8.7  -3.66178   TACTGAATGAAAAAA           GGGCGAATC TTTT GATTCACCC            TTTCCGATTACACCG  74 35
 LT978_14355 2954054 .. 2954073 +  -7.9  -5.42259   AATTCTTTCTGTAAA            GCAGCTT AATCAA AAGCTGC             TTTTTTTACAGCTCC 100 39
 LT978_14365 2955336 .. 2955354 + -11.7  -5.48303   TGACTGAAGCAAAAA             GGCCGGA TGTGT TCCGGCC             TTTTTTTCAGCTTAT 100 38
 LT978_14375 2957328 .. 2957350 + -11.3  -5.71712   CCATGAATAAGAAAA           GCCGGATCT GTATA GGATCCGGC           TTTTTTTATGTCGCG 100 31
 LT978_14395 NONE
 LT978_14400 NONE
        crcB 2961178 .. 2961202 +  -7.2  -3.23274   ATCCATTTAAAAAAA          CCTTGAGC TTATTTTTC GCTCAAGG          TTGCGTTATGAAGCA  64 31
 LT978_14425 2965899 .. 2965925 +  -3.8  -3.51597   TAACAGGAGGTGTTA        CCTTCATCTTC CCAAAA GGAG-TGAAGG         TTCTAATTGGACATT  51 54
 LT978_14430 2967274 .. 2967301 +   -15  -5.72207   AAGCATAACAAAAAA        GCTTGCGCGTCTG ATA CAGACG-GCAAGC        TTTTTTTCATTTACA 100 33
        sigM NONE
 LT978_14445 NONE
 LT978_14450 2969995 .. 2970015 + -10.4  -5.44119   TTTTAAACATAAAAA            CAGGCCCT TTTAC GGGGCCTG            TTTTTTTAAAATGAA 100 35
 LT978_14475 2976301 .. 2976318 + -11.3  -4.07124   CGTCTAAATAAAAAA             CCCGTTC GGAT GAACGGG              TTTCTCTCACTGCTA  86 64
 LT978_14485 2978998 .. 2979021 + -18.2  -4.67697   ACGGAAAATAAAAAA          GGATGCGGGG ATTT CCCCGCATCC           TTTCTTCTTTTACAG 100 30
        nsrR 2982686 .. 2982707 + -11.7  -5.60993   GACTGCTCAGAAGCT           GAAGGAATG TCCG CATTCCTTC            TTTTTTTATGCCGGC 100 24
 LT978_14505 2984331 .. 2984358 + -14.2  -5.07567   TCTGATATCTGATAA        GCTGTACGGCCT CATA AGGCTGTGCAGC         TTTTTTACAGTCTGA 100 36
 LT978_14515 2985126 .. 2985146 + -16.9  -4.54553   GCTGACATAAAACAA            TCCCGGCGT CAG ACGCCGGGA            TTTCTTGTGTTTGTG 100 31
 LT978_14585 3000691 .. 3000710 + -13.6  -5.39681   GTGAAATTCTTTTTT            GCGCTGTG CCTG CACAGCGC             TTTTTGTTTCGTTCT 100 436
 LT978_14600 3003787 .. 3003826 +  -8.7  -5.59357   ACCTCCATTAATGAA  AAAAACGGCGTTGGAAA CCTGAC TCTCCAATGCCGTTTTC   TTTTTTTCATATGCT 100 30
 LT978_14615 3005982 .. 3006007 +  -9.9   -5.0925   TTAGAAACGAAAAAA         TCCTTCATTCGT TCA ACGA-TGAAGGA         TTTTTCGTTTTAGCG  93 37
 LT978_14625 3008953 .. 3008965 +  -9.1  -4.88687   GTCAGCATGTTCCGC                CGCCT GAT AGGCG                TTCTTTTTTGTTTCC 100 318
        cspB 3010102 .. 3010123 + -13.7  -5.90981   AAATTGTTTAAAAAA           CCTGCCGGT GTAC GCCGGCAGG            TTTTTTTTCATCTAA 100 39
 LT978_14730 3027139 .. 3027154 +    -9   -5.0538   TGGCTTTCATAAAAA              GACACG CCTT CGTGTC               TTTTTTCACATAAAA  91 29
 LT978_14740 NONE
 LT978_14745 3028528 .. 3028545 + -12.7  -3.05715   CTAAGCGCTTAAAAA             GGCGGGT GAAT ACCCGCC              TTCACTGCCGGCATT  91 399
        katA 3035247 .. 3035286 + -17.5  -3.45945   CCGTCACCAAAATAA  CATCAAAAAACCTGCCGG TCTGC CCGGCAGGTTTTTT-ATG  TTCATTATCAATAAA 100 26
 LT978_14815 3042715 .. 3042753 + -14.9  -4.75472   TTCACCGTTTTTCTA   AAAAAGATGAAGATGGA CACAC TCCATCTTCATCTTTTC   TTTTATTGATATAAG 100 25
 LT978_14935 3054554 .. 3054601 + -10.7  -5.42198   CAGAAAAAACAGTGT AAAATAAACGAAGCTGACCGT ATCAAA GCGGTCAGCTTCGTTTAGTGG TTTTCTTTTTTGGAA 100 19
 LT978_14950 3057084 .. 3057117 + -15.5  -4.89393   GAAAAAATAACTTCT     GAAACAAGCGGGAGCC CGG GGCTTCCGCTT-TTTC     TTTTTGTCCGATTTG 100 31
 LT978_14955 3058396 .. 3058423 + -15.6  -5.00642   TTGCATTCAAAAAAA        CGTATGCCGACC ATTC GGACGGCATACG         TTTTTGTATCAGTTC 100 69
 LT978_14985 3062630 .. 3062649 +  -9.3  -4.56775   ACGGCCACGGCACTC            GCGTCAG CTATGA CTGACGC             TTTTTAGCGGCCGCT  88 9
 LT978_14995 3064941 .. 3064965 + -13.6  -5.84432   GCAGAAAAAATTAAA          GCTCGGCTCT GTTTA AGAGCCGGGC          TTTTTTTGTCTTCTC 100 10
 LT978_15030 3071259 .. 3071277 + -11.7  -5.75342   ACACACACCGTAAGA             GACCGGG AATGA CCCGGTC             TTTTTTTTGCGAAAA 100 40
 LT978_15035 NONE
 LT978_15040 3072658 .. 3072685 +   -15  -5.25772   GAAACACTGAAAAAA        GCTTGCAGGCGGA ATA TCC-CCTGCAAGC        TTTTTGTTATCCTTT 100 31
 LT978_15060 3076148 .. 3076160 +  -6.3  -3.56378   AAACGGAAATAAAAG                CCAAT CCT ATTGG                TATTCTGTTTTGAAG  62 41
 LT978_15065 NONE
 LT978_15070 3076570 .. 3076595 + -13.3  -5.42259   CCCGCTAATACGAAA         TCCCCGCCTCT GTAT AGAGACGGGGA          TTTTTTTACAACTCG 100 33
 LT978_15090 3081472 .. 3081492 + -10.4  -5.95539   CATAGAGATGAAAAA           GGCCTGCCG GTAT CGGC-GGCC            TTTTTTTGTTTGACA 100 36
 LT978_15095 3083513 .. 3083548 +    -6  -3.27525   TCGCGGTACGGCGTA    TCAAGCTGACTGGCCG ACAT CGCTCTGACAGCTTGG     TTCAGTTTAGCCGGA  57 376
 LT978_15125 3089129 .. 3089153 +   -10  -3.48766   GCATAAACAAAACGG         GGCGGCTCTGT ATCT GCAG-GCCGCC          TGTTTACGTTCTGAG  79 35
        corA 3113557 .. 3113575 +  -7.4  -5.75342   AATATTTTCAAGTAA             GAACGGCT GCC GGCTGTTC             TTTTTTTTGAGAAAA 100 26
 LT978_15230 NONE
 LT978_15235 3115184 .. 3115208 + -11.5  -4.36914   TATCAAATAACAAAA          CACCTCTCC ATTACCA GGAGAGGTG          TTTTCTACAGGCGCG 100 31
       yfkAB NONE
 LT978_15255 3118393 .. 3118416 + -11.1  -6.04953   ATCACACACAAAAAA          GCTGATTCC CGAACC GGAATCAGC           TTTTTTTATTTATCT 100 21
 LT978_15270 3121688 .. 3121711 +   -11  -4.12254   CGGCCACATAAAAAA          GCCGCCTG ATCTGAGC CAGGCGGC           TTCTTTCTAGTGGTA  86 30
 LT978_15290 3123915 .. 3123937 + -12.7  -5.37593   AATAAACCCATGTCA           GACCTGCCG AAAAA CGGCGGGTC           TTTTTTGATTTAAAA 100 36
 LT978_15295 NONE
        aroD NONE
 LT978_15305 3127185 .. 3127213 + -12.4  -4.60808   CCTATTGTGACAGAA        GCGCCGAAGGAC AATCC GTCTTCCGGCGC        TTTATCTTTTTCTCC 100 41
 LT978_15310 3128326 .. 3128351 + -11.8  -4.66537   ATCTTCACAAAAAAA         GCGGAACGCC TGATAC GGCGCTCCGC          TTTTATATTACGCAA 100 13
 LT978_15320 3133425 .. 3133451 + -15.3  -4.84359   CGGTTCATCCCAAGA         GCTCTCCTGAT CTGAT ATCAGGAGAGC         TTTTTCTGCCGGTCC 100 60
 LT978_15325 NONE
 LT978_15330 3135500 .. 3135522 + -16.3  -5.84432   AAATAAACATTAAAA           GCTGCCGGG ACACG CCCGGCAGC           TTTTTTTATCTTATA 100 28
 LT978_15355 3140766 .. 3140784 +  -3.1  -3.52117   ATTACGCCGGTGCCG             CCCATTA TAGAT TAAAGGG             GTTTTTATGAATGCC  49 11
 LT978_15360 NONE
 LT978_15365 3141495 .. 3141517 +   -12  -3.07891   TATAAAGAGCCGGCT           TACGGGCGGC CCA GCCGTCTGTA           TACTTTCTCCTTATA  87 36
 LT978_15375 3144061 .. 3144084 +   -14  -5.47159   AAAGAATAAACAAAA          GCCAGATCAT TGAT ATGATCTGGC           TTTTTTATGTTCAGC 100 32
         map NONE
 LT978_15395 3147318 .. 3147342 + -15.7  -5.31877   CTTCTCGTCAAACTT          GCCGGACACTG ATA CAGTGCCCGGC          TTTTTTATGCTCCGT 100 14
 LT978_15400 NONE
 LT978_15405 3147891 .. 3147914 + -14.6  -5.72616   GCATAACGTAAATCA          GCCGTGCTGT CAGT GCAGCACGGC           TTTTTTTCTATACAT 100 35
 LT978_15415 3149216 .. 3149226 +  -2.4  -5.04385   GCGGAAATCCCCATG                 ACCG AAG CGGC                 TTTTTTGAGCATATC  73 320
 LT978_15460 3166642 .. 3166666 +  -4.9  -2.96609   CCATGTGTGAAAGAG          CACGTTCGGCA AAT TTCCGGGTGTG          ATATTTTCTTGAATG  51 49
 LT978_15490 3171781 .. 3171798 + -11.3   -5.7946   ACGCATATAAGGAAA             GAAGGGC CCTG GCCCTTC              TTTTTTTGTTGCCGG 100 43
 LT978_15495 3172929 .. 3172947 +  -7.4  -4.72556   TGATGATGAAAAAAA             GGAGGG CTTTGTC CCCTCC             TTTTCTGCTTTTTCG  81 43
 LT978_15510 3176353 .. 3176378 + -13.3  -5.85737   CTGTAAACACAAAAA         GGAACTCCCGC CCGT GCGGAAGTTCC          TTTTTTTCTTAATGT 100 35
 LT978_15530 3181375 .. 3181403 +  -7.4  -4.87291   ATAACATCGAAAAAA        AGAGCTGCCC CCGTATGAA GGGCAGCTCC        TTTTTGATTACGCTG  83 37
 LT978_15550 3186407 .. 3186437 + -13.5  -5.10029   ATAAATAAAAAGGGA       GGCTCTTTTTTCT GTTTG AGAAAGAAGAGCC       TTTTTTGCACTTGAT 100 33
 LT978_15555 3187752 .. 3187772 + -12.6  -4.78848   GCATTCATAAAAAAA            TCCCTGCC GAAAA GGCAGGGA            TTTTATGTTTCAACC 100 31
 LT978_15595 3199587 .. 3199608 +  -5.9  -4.29493   ACAAGACTGACAAAA           GTCCAG-ACG CCA TGTTCTGGAC           TTTCTGTATTTAATA  70 31
 LT978_15605 3201405 .. 3201427 + -14.8  -4.58283   GACAGAACATAAAAA           GGCGCCCTTC TTA GCAGGGCGCC           TTTTTCGCGCGATTA 100 29
 LT978_15630 3204407 .. 3204421 +  -3.6   -3.6707   CATCTTAATTGACTT               TGAGAA TCA TTTTCA               TTTAAAATGTTGGAT  53 50
        hmoA 3204798 .. 3204822 +  -9.4   -5.8096   ACGAAAAATAATAAA         GAGCATTTGCC CCAG GGCAA-TGCTC          TTTTTATTTTTTCTC 100 30
 LT978_15685 NONE
 LT978_15690 NONE
 LT978_15695 3213740 .. 3213795 + -11.4  -2.91276   AATAAACTACTTTGG CCTATAAATCAAAAATAGCTCAGC CCTTCTCC GCTGGGCTATTTTTGATAACTAGG ATTTCTCAACGACCG  82 509
 LT978_15705 3214735 .. 3214747 +  -4.1  -2.62983   TAGGTATATTTTCAT                TGAGA TGA TCTCG                TAATATGGCGATACG  44 524
 LT978_15740 3227527 .. 3227549 +  -7.6  -5.77632   CCGGTCTCCGTGTCA           GCAGCGCCCT TTC AGGCGGCTGC           TTTTTTTATCGTTTT 100 60
        putP 3232668 .. 3232692 +  -8.6   -5.4505   AGAAATAGACAAAAA          GCCGTCAG ATTTTATCC CTGACGGC          TTTTTTCTTCCGCAC 100 33
 LT978_15765 3233479 .. 3233501 + -11.3  -5.90231   TACGTTATAAAAAAA          CGCCGGGCTG GATT CAGCC-GGCG           TTTTTTTATATTTAT 100 31
 LT978_15795 3242730 .. 3242754 + -13.6  -5.09895   GCACGCATAAAAAAA         CCGC-CTGCCG TCAT CGGCAGAGCGG          TTTTTTACGTAGCTG 100 31
 LT978_15815 3246185 .. 3246207 +   -15  -5.69473   CATCAGCAAGAAAAA           TAACAAGCCG TTT CGGCTTGTTA           TTTTTTTCTCCTGTC 100 23
        gabP 3273152 .. 3273177 + -10.4  -5.40072   CGCAATAACCGCAAA         CACCCCCCCT CAAAAA AGGGCGGGTG          TTTTTTTAACCAACC 100 33
 LT978_15940 3274804 .. 3274823 +  -4.2  -6.02919   GTAAACAAACATCTC            CCCCTTTC TCCA GAAGGGGC             TTTTTTTATTTATCC 100 37
 LT978_15945 3275241 .. 3275264 + -11.8  -3.82484   TCTCAACATAGAGAA          GGCCTC-CATG TCT CATGAGAGGCC          TTTGCGTTATCATGT  86 57
 LT978_15950 3275471 .. 3275490 +  -7.8  -5.58074   TTGTTCATTAAAAAA            CACCCAGC GGGC GCTGAGTG             TTTTTTTCATGGTTG 100 30
 LT978_15965 3278412 .. 3278426 + -11.4  -5.59357   GACACATCCGAAAAA               GAGCCG TTC CGGCTC               TTTTTTTCATCTCAT 100 60
 LT978_15970 3279045 .. 3279059 +    -5  -3.14132   GCGCATTCAGCTGAC               GAAGGA GGA TCTTTC               TTAATGGAAAAGAGA  52 7
        rsiV 3279937 .. 3279960 +  -6.8  -5.68438   AAAGAAAGAAAAAAA          TCCATGATAT CCGC AGATCATGGA           TTTTTTCTTTCGTCC 100 39
 LT978_15980 3282135 .. 3282153 +  -7.4  -4.85129   ATCATGACAAAAAAA             GAGGCC CAAACAA GGCCTC             TTTTTCGTATATCGT  81 34
 LT978_16025 3292715 .. 3292751 +  -7.5  -4.15788   TTTTAAAGATAAAAA    GGTATCTTTATCAGT ACAGTAA ATTGATTAAGATACC    TTTATTGAAAAAATT  75 100
 LT978_16045 3297884 .. 3297901 +  -5.6  -5.40072   TTAGAATAAAAAAAG             CTCTCA ATTAAA TGAGAG              TTTTTTTACAGCGCA  83 37
 LT978_16360 3336472 .. 3336486 +  -8.6  -3.20236   ATGCTGAATAGATCA               CCTCAA AAA TTGAGG               TTAAGTGTTCAGTTG  70 76
 LT978_16365 3337267 .. 3337284 +  -5.5  -5.47218   TACAATATCACTAAA             GTAAGCC TTCG GGCTTCC              TTTTTTTGAATACAA  83 22
 LT978_16370 NONE
 LT978_16375 3339199 .. 3339216 + -11.3  -3.58329   AAACAAAAAGAAAAA             CCCCTTG AAAT CAAGGGG              TTTCGGCACTCTTTA  83 74
 LT978_16380 3339635 .. 3339652 +  -5.6  -5.40072   TTAGAATAAAAAAAG             CTCTCA ATTAAA TGAGAG              TTTTTTTACAGCGCA  83 37
 LT978_16690 3378218 .. 3378232 +  -8.6  -3.20236   ATGCTGAATAGATCA               CCTCAA AAA TTGAGG               TTAAGTGTTCAGTTG  70 76
 LT978_16695 3379013 .. 3379030 +  -5.5  -5.47218   TACAATATCACTAAA             GTAAGCC TTCG GGCTTCC              TTTTTTTGAATACAA  83 22
 LT978_16700 NONE
 LT978_16705 3381025 .. 3381035 +  -8.2   -4.6971   TGTCAGGCATTCCTG                 CGCC GCC GGCG                 TTTTCTTCCGGTTTG  88 154
 LT978_16720 NONE
 LT978_16725 3384105 .. 3384130 + -14.9  -5.67967   AATAATAAAAGAAAA         GCCATTTCTCA TCAT TGAGAAATGGC          TTTTTTTATGCTGAT 100 36
 LT978_16750 3388325 .. 3388343 +   -11  -5.24129   AATAGAAAAAGTCAA             GCACCTCT TTA AGGGGTGC             TTTTTTATCCACAGC 100 36
 LT978_16825 3401438 .. 3401458 +  -9.7  -5.52384   AGGCTTAACACAAAA            GGACGGACA CGC TTTCCGTCC            TTTTTTTGATGCCGA 100 33
 LT978_16830 3402397 .. 3402425 + -16.9  -4.89852   GATATGAACTTGTAA        CAAAAAACGCCTG TTT CGGGCGTTTTTTG        TTTTTCTGAATATGA 100 26
 LT978_16835 3404201 .. 3404232 + -13.9   -3.6944   GTGATAAATGACGAA      TGCCGGAAAGAAG TATGGT CTTCTTTCCGGTA       TATTTATGTTAAGGG 100 30
 LT978_16840 3404892 .. 3404911 +  -4.3  -4.57073   AGAAGTTTGCAGAAA            TGATTGG CGGAGA CCGATCA             TTTTTGACCGCCGTG  68 23
 LT978_16845 3405294 .. 3405313 +  -3.6  -4.15044   ACAAGGGGTGAACAT            TAATGGCA TGGC TGCTGTTA             TTTATTGCCGGAGCG  59 23
 LT978_16850 3405640 .. 3405664 +   -10  -5.70829   TTTTTAAATAAAAAA          CAAAGGACCC TAAGC GGGCCCTTTG          TTTTTTTATGCTGTT 100 55
 LT978_16870 3409898 .. 3409939 +  -7.4  -5.45802   TCCGCATAAATGTGA GACCGCAAAAAAGCCAAAGG AGTT CCTTCGGC-TTTG-GCGGTC TTTTTATTTTGCGGC  91 32
 LT978_16880 3410891 .. 3410913 + -15.6  -5.11836   TTGACTTTTCTATTA           CCGCCGTCTT CTC AGGACGGCGG           TTTTGTTTTGCATGT 100 37
 LT978_16895 3413200 .. 3413229 + -11.6  -4.74453   AAGCCATTATAAAAA       GCCTGTTTCC-CT TTGGC AGAGGAAACAGGC       TTTTTCCATGTATTA 100 41
 LT978_16910 3416508 .. 3416533 +  -6.8  -5.21709   GTTAATACGAAAAAA         CCGC-GGGCAG GAAAA CTGCACAGCGG         TTTTTTCGTCTCAGA  88 36
 LT978_16935 3420708 .. 3420725 +  -5.5  -3.62046   GATAATGGACGACGG             TCGACGG ACTA CGGTCGA              TTGTTAAAAACCTGA  59 101
 LT978_16940 3421542 .. 3421561 +   -15  -5.55695   TATTTTAAACTGAAA            CGGGAGGC GGCC GCCTCCCG             TTTTTTCTGTTCTTC 100 33
        fabF 3423774 .. 3423793 + -10.8  -5.42514   CGGGCATCAAAAAAA            GGAGTGAA TCAT TTCACTCC             TTTTTTGCTTTCTCC 100 41
 LT978_16965 3427418 .. 3427440 + -11.3  -5.80364   AAATGAAAAATAACC           GCCTGCAGT GTATA GCTGCAGGC           TTTTTTTATTCGGCT 100 28
 LT978_16970 3428281 .. 3428303 +  -8.5  -5.67063   CACAGGTACGGCTAA           TCCTTCCAA ATCAA TTGGGAGGA           TTTTTTTGTCCTCCC 100 245
       abc-f 3429978 .. 3429994 + -12.3  -5.07652   AAATGAATGTAAAAA              CCCGTGA TTG TCACGGG              TTTTGTTTTGGAAAG 100 35
 LT978_16980 3430835 .. 3430853 +  -8.9  -5.17786   CAGCACATAAAAAAA             GCAGATC ATAAC GATCTGC             TTTTTCATTTTATTC  91 31
 LT978_17000 NONE
 LT978_17005 NONE
 LT978_17010 NONE
 LT978_17015 NONE
 LT978_17020 3437886 .. 3437906 + -14.1  -4.68479   AAATAGAGCGAAGAA            GGCAGAACA ATT TGTTCTGCC            TTTTCATTATTTTCT 100 225
 LT978_17030 3440009 .. 3440031 +  -4.8  -5.45726   TTTCACCAAAAATAA           GCCGTCAG GACCAAG CTGACAGC           TTTTTTTGGGGTGTA  82 44
 LT978_17035 3440591 .. 3440612 +  -8.1  -4.64598   ATAATCAGAAAAAAA           CATACC-GCA TGC TGCCGGTATG           TTTTTAACATGCTTG  86 37
 LT978_17045 3442758 .. 3442773 + -11.8   -5.9362   TCATGAAAGAAAAAA              GGCGCC GAAC GGCGCC               TTTTTTTATCTTTTA 100 35
 LT978_17060 3445925 .. 3445946 + -10.3  -5.40072   AATTCTCATAAAAAA           CATACCAAT ATCT ATTGGTATG            TTTTTTTCAGCCCAG 100 39
 LT978_17100 3451341 .. 3451355 +  -7.8  -2.61264   ATGCAAAATGCAGGA               TGGCTC CTT GGGCCA               CTTCTACATAAAAGA  62 99
 LT978_17155 3463073 .. 3463119 + -17.6  -4.00589   TAAAAAACAAAAAAA CAAAGAAAGACAGCACTGACTG ATT CAGTAATTGCTGTTTTTCTTTG TTTCATGTGTTTTAG 100 7
 LT978_17180 3468582 .. 3468599 +  -8.5  -4.90266   CAAATTCTAATTCTT             CGTTTAC TGTG GTAAACG              TTTTTGATTCATAAG  88 358
        cotR 3470037 .. 3470061 + -10.1  -4.77157   ACAATGAACAAAAAA          TACCAAGGG ACTCAAA CCCTTGGTA          TTTTTAATGCGTTCA  91 62
 LT978_17195 NONE
 LT978_17200 3471545 .. 3471561 +  -2.2   -5.4477   TGAACCGTAGGAACG              GTGGCT AAAAG AGCTGC              TTTTTTTGAGCCTTT  79 445
 LT978_17260 3480128 .. 3480149 +  -4.4  -2.79183   TATAAACAAAAAATA           CCAAAGGT GTCAAA ACCCTTGG            TATCATAGGGATCGG  48 414
 LT978_17275 NONE
 LT978_17280 3482579 .. 3482606 + -11.4  -3.08813   AAATAAAAAACAAAC        AGATCCACTCAA ATAA TTGAGTGGATCG         TATATTGGAATAACG  83 79
        cmpA 3489559 .. 3489578 +  -6.4  -5.09259   TTTCTACAGAAAAAA            ACACTGCT CGTA AGCAGTGC             TTTTATTTTACCATA  83 13
 LT978_17430 3501033 .. 3501053 +    -9  -4.81551   CGTGCAGCAAAAAAA           GCGG-CGGT ATTA ACCGTCCGC            TTTTTCATATGAATA  88 13
 LT978_17460 3507956 .. 3507983 +  -9.3  -4.71776   CAGGCTCTACATGAA        CATGGACATGA GTCACA TCATGTTCATG         TTTTATTGCATATTC 100 69
 LT978_17470 NONE
        fbpB 3509332 .. 3509348 +    -8  -6.13503   AGCCATACATAAAAA              GAGCCT TTTTC AGGCTC              TTTTTTTTATTGCTC 100 29
 LT978_17520 NONE
 LT978_17525 3519744 .. 3519757 +  -5.9  -5.71712   GACGAAAATAAAAAA               GCCTC TAAA GGGGC                TTTTTTTATGTGCGC 100 30
 LT978_17550 NONE
 LT978_17555 3523106 .. 3523127 +  -4.3  -5.01535   CGGAATATAGAAAAA           CCCCGCTCT CAAG AGAACGAGG            TTTTTCTGCTTATAA  73 325
 LT978_17570 3525427 .. 3525456 + -15.1  -4.07885   ATTCATTCCGTTAGA       AAAAAACCGGCCG TCAG CGGCCGGTTTTTC        TTTTGACGCCGGGTG 100 27
 LT978_17575 3525796 .. 3525818 + -10.7  -5.81412   TCACGCAAACGAAAA           TAAACAGGC ATGCC GCCTGTTTA           TTTTTTTTACCTAAG 100 23
 LT978_17580 3526646 .. 3526672 + -10.3  -4.86621   TGAAGTAAATGCAAA         GTGCTGTTAGA TTCAC TCTAATAGCAC         TTTTTCATTGGAGAT  93 75
 LT978_17585 3527577 .. 3527590 +  -2.4  -3.06696   TTTTATATAACATCC               TGAC TTTTCC GTCA                TATATTCAAACGAAA  43 352
 LT978_17590 3527975 .. 3528019 + -24.7  -2.77235   AAGCAAGCCGCTCAA CAAACAAAGGAGCTGTCGAGA TCT TCTCGATAGCTCTTTTGTTTG TCCTTGAATGATTGA 100 135
 LT978_17645 3535362 .. 3535384 + -13.6  -5.24129   GTAAATAAATAAAAA           TAAACAGGCA TGC TGCCTGTTTA           TTTTTTATAACCACC 100 107
 LT978_17700 3550329 .. 3550349 + -11.2  -5.18357   ATTATCAATAAAAAA            GCTCCTCT TCTGC AGAGGAGC            TTTTTTCATGCGTTA 100 30
 LT978_17750 3562308 .. 3562336 +  -8.8  -2.93393   TTAAGGAGCACGAAA        AGCGCGCTCC CCATGAAAA GGAGCGCGCG        GTTTATGAGCTGGCG  69 377
 LT978_17800 3569646 .. 3569663 +  -9.8  -5.44119   CACGCTTGTCCGAAA             GCCGCC GGTGGA GGCGGC              TTTTTTTACGATGGC 100 41
 LT978_17830 NONE
 LT978_17835 NONE
 LT978_17840 3576712 .. 3576741 +  -9.4  -5.88565   GCGTGTAAGCAAAAA      GCGATC-C-GGCTC TAAA GAGCCTGCGATCGC       TTTTTTTCTTATCCG 100 33
 LT978_17865 3582898 .. 3582914 +  -5.7  -2.94232   CGGCGCATAAAAAAA              ACCCCGG AAT TCGGGGA              CTTATTTACCAGCGG  53 31
 LT978_17875 NONE
        nfsA 3584436 .. 3584457 + -15.9  -5.59879   AAATAAACGTATCAG           CCTGCCGGA ACAC TCCGGCAGG            TTTTTTCTATTTCTC 100 35
 LT978_17885 NONE
 LT978_17890 3586913 .. 3586940 + -14.2  -5.68023   GCGGTAAACCAAAAA        GAACCCGATCAC GTAT GTGACCGGGTTC         TTTTTTTACTTCTCG 100 34
 LT978_17915 3592313 .. 3592342 +  -4.2  -4.38219   TATGACGAGTTTTTC       GCCGGAGTCTTA CTCCCA TAGGACACCGCC        TCTTTTTTCTCTTGT  66 5
 LT978_17920 3592542 .. 3592575 + -13.9  -5.07652   TCACTCCGTCTATAT     GAGGACGCTGCGGGT TTTG ACCTGCGGCGTTTTC      TTTTGTTTTCCGCCG 100 44
 LT978_17945 NONE
 LT978_17950 3598599 .. 3598623 +  -7.1  -5.42975   AAGTGAACGTAAAAA          GAGCCAGGG CTGCATC CCCTCGCTC          TTTTTATTTATATCA  91 97
 LT978_18005 3610227 .. 3610243 +    -3  -3.86897   AGAGATTGCCTTTGA             TGACAGC CCCG GC-GTCA              TTTGTCACAGATACG  54 491
 LT978_18015 3613363 .. 3613384 + -15.9  -5.65177   TACAATAAAAGAGAA           GCCTGCGGA ATCG TCCGCAGGC            TTTTTTTGTGCGTCT 100 33
 LT978_18040 NONE
        tcyA NONE
 LT978_18050 NONE
        tcyC 3619490 .. 3619519 + -13.8  -5.41746   TTTGTAGGAGCCGGA       GAAGAAGCGAAA CACTGA TTTCGCTTCTTC        TTTTTTTGGGCGGTT 100 34
 LT978_18060 3620213 .. 3620231 +  -9.6  -6.09196   TCCGTTCATTAAAAA             CAAAGCCG AAA CGGTTTTG             TTTTTTTATTTTCGG 100 29
 LT978_18065 3620994 .. 3621010 +  -9.4  -5.61596   GTAAGCATAGAAAAA              GGAGGG TATCC CCCTCC              TTTTTTTGTCAGCCT 100 37
        hxlA NONE
        hxlB 3650988 .. 3651013 + -13.3   -4.9934   CTGGAATGATTTGCT         GACGGCCTTCT TATC AGATGGCCGTC          TTTTTATCGTCTTGT 100 32
 LT978_18125 NONE
 LT978_18130 3652204 .. 3652233 + -15.2  -2.55034   GCAATGTAAAAGAAA       TCCCTGAGAGAA TCATAT TTCTCTCAGGGA        ACTTTTATAAACTTT 100 32
        nasD 3658716 .. 3658726 +  -6.8  -3.14564   GATCTATTCGAAAAT                 GTCG TCA CGAC                 TTCATAAAACAGTAA  60 8
        nirD 3659084 .. 3659105 +  -9.5  -3.95677   TATTGATCAAAGACC           GGATCACTT TTCC AAGTGGTCC            TTCATTTTTTAAATT  81 35
        cobA 3660597 .. 3660628 +   -13  -2.95245   ACGCCGGAATGCTTT      TCTGACCCCCGG-GC CCA GCATCGGGGGTCAGC      CCTTTTTTATTGTGT  91 42
 LT978_18225 3672385 .. 3672404 +  -8.6   -6.0427   CTGTTTTTTCCCGCT            GACTCTTC GATC GAAGGGTC             TTTTTTTTGTATCAT 100 24
        tmrB 3673092 .. 3673105 +  -8.1  -4.17355   TCAATAAATAAAAAG               CCCCT CTGA AGGGG                TGTTTTTTCAAATTA  79 82
 LT978_18235 3673516 .. 3673535 + -12.2   -5.3671   AACGATAAACAATAA            CCTCCCTT TCAA AAGGGAGG             TTTTTTCATTCTATT 100 42
 LT978_18250 3676732 .. 3676757 +  -3.9  -3.84246   TGATCAGCCGGCTCA         TGTTTCGTCCG AACG CGGTTGAATCA          TTTAATCCTTCGAAA  57 209
 LT978_18270 3680185 .. 3680212 +   -15  -5.69793   AGCGAATTAAAAAAA        GCAGTACATGGC GTTT GTCATGTACTGC         TTTTTTGTTTACTCT 100 31
 LT978_18295 3686919 .. 3686938 + -10.7  -5.66868   GAAGCATAAAAAAAA            GCAGCCC GTTACA GGGCTGC             TTTTTTTCATTACTT 100 32
 LT978_18350 3698323 .. 3698372 + -10.6  -5.43514   ATATTTCTGTAAAAA AAGCCGTCAAACGGCGCAGCAG ATGAGA CTGCTGCACCGCTTAACGGCGG TTTTTTCGTTCTTTT 100 29
 LT978_18370 NONE
 LT978_18375 3702127 .. 3702165 +  -6.7  -4.36411   TAAACTCTTGTTTCG   TAAGGGCGGAACGTGAT GCGGG ATTCCGTGCCGCCGTTA   TTTTCATAGTTGCTG  74 38
 LT978_18395 3706821 .. 3706835 +  -4.2  -3.66908   AACCTGCCCCTTCCG               TCCGTT TTC AGCGGG               TTCATTTTAAAAAAC  55 356
 LT978_18410 3710581 .. 3710602 + -11.7  -6.09196   CCTGACAGCAAGAAA           GGAAATAGC GCAG GCTATTTCC            TTTTTTTATTTTCAC 100 36
 LT978_18435 NONE
      lmr(B) 3717065 .. 3717089 + -12.2  -5.71712   TCATTCATAAGAAAA          CAGCAGGCTC CCCGT GAGTCTGCTG          TTTTTTTATATACCG 100 31
         pcp 3719163 .. 3719173 +  -2.4  -3.53224   TGTCAGAAACATGAC                 GGCC AGA GGCA                 TTTCAAACAAAAATC  47 247
 LT978_18475 3722944 .. 3722976 + -11.5  -6.04324   GGATAACGGCCTTCA      GCTTGTAGAGAAAAT GAT GTTTTTTCTGCAAGC      TTTTTTGTTTTTTGC 100 54
 LT978_18505 3727241 .. 3727273 + -17.3  -5.86976   AAGAATAAAAAAGCA      GCTTGTAGAGAAAAC GAT GTTTTTTCTACAAGC      TTTTTTGTTTTGTGC 100 33
 LT978_18530 NONE
 LT978_18535 3734020 .. 3734045 + -11.2  -5.01732   ATTTCCTAAACAAAA         GGTGTTCGGG CAGCGT CCTGAACACC          TTTTTTCCGCCGGTT  93 32
        mmuM 3735126 .. 3735150 + -12.2   -5.4505   GCCGGTTCGCCGGAA          TCTCGTGCCG TTCGC CGGCATGAGA          TTTTTTATTAGAACG 100 75
 LT978_18545 3736603 .. 3736624 +  -9.5  -5.05505   CAATAACCAAAAAAA           GAACCC-TGC GGC GCAAGGGTTC           TTTTTCATTTATACT  91 35
        gltP 3739332 .. 3739350 + -10.3  -4.70583   TGTAAACACAAAAAA             GACCACC TCATT GGTGGTC             TTTTCTATTAATCAA  91 36
 LT978_18605 3749160 .. 3749196 + -11.7  -5.00884   TGAACAGGCAGCTCC    TTGCTCCAGGAATGCTC AAT GAGTATTCTTGGAGTTA    TTTTTTAAGGAGGAT 100 42
 LT978_18610 3749645 .. 3749661 +  -5.1  -5.67063   ATGATCAGTTAAAAA              CCCCT CTGCTTA AGGGG              TTTTTTTATGATGCA  85 29
        hpaB 3751273 .. 3751295 +  -8.5  -5.80951   TCTGCTTTTGATAGC          T-GGATCGGC TGCC GCCGATCCTA           TTTTTTATTTTGGCT 100 61
        glpT NONE
 LT978_18630 3754194 .. 3754223 + -13.7  -5.41143   AAATCATAAAGCCAG       CATGGGTTCGG AGATGATG CCGAACCCATG        TTTTTTTGCCCGATC 100 32
 LT978_18640 3756359 .. 3756387 +  -7.5  -5.60993   ATAATCTGTGCCCGG       GCTGCCCGGCCGT ATCAA ACGGC-G-GCAGC       TTTTTTTATGCAGAC 100 37
 LT978_18705 NONE
 LT978_18710 3767816 .. 3767835 +    -7  -5.21709   TGTTTCAAATTTAAA            GCCGGCGG TTCT CCGTCAGC             TTTTTTCATGTGCGG  91 27
 LT978_18715 3768789 .. 3768810 +    -8   -4.7416   AACACATAAAGAAAA           GCTGACGG CATCAT TCGTCAGC            TTTTTCACCTTTTAC  84 44
 LT978_18805 NONE
 LT978_18810 NONE
        murQ 3785470 .. 3785503 +    -8   -4.0896   ATATTGTGCTTTTAC     GAGCCCGCGCCG TTTTCATGTT CGGCGCAGGCGC      TTTTAGGACGCGTTT  75 58
 LT978_18820 NONE
       pbp4b 3788234 .. 3788246 +  -3.4  -4.38154   ATGAAGCCATTGAAT                GACA ACCCA TGTC                TTTTGTCCAAACTAT  62 24
 LT978_18830 NONE
 LT978_18835 3791465 .. 3791480 +  -6.2  -4.44974   TACTGACAACATTCG              TGTTAC ACGT GTAACA               TTTTGTCGCATTTCA  72 35
 LT978_18840 3793180 .. 3793207 +  -3.6   -3.2818   TTATCCGAAGATCGT        CCATGG-TAAT GCCGGAA ATTATCCATGG        TCTTATCCCTATTCA  49 17
 LT978_18845 NONE
 LT978_18850 NONE
        feuC NONE
 LT978_18860 3797005 .. 3797024 +  -9.3  -5.58074   GCTGTACGGAAAAAA            CCGCTCA CGTGAC TGAGCGG             TTTTTTTCATACTTG 100 10
 LT978_18890 3804446 .. 3804470 + -15.9  -4.20086   AATGTAAACAAAAAA          GCTAATGCCTT TGA AAGGCATTAGC          TTTATATATCTATGT 100 34
        pdaB NONE
 LT978_19000 3823245 .. 3823267 +  -6.1  -5.46657   AAGCCAATAAAAGGC           CGGGCCGTG TTGAT CCCGGCCCC           TTTTTTATTCAGCTG  85 31
 LT978_19020 3826214 .. 3826235 +  -2.1  -5.30339   AAAGCCGCAAAAAAA           CAGCACCTC TGAC GGGATGCCG            TTTTTATATTTTAAT  72 14
        abrB 3936872 .. 3936897 +   -12  -6.02345   TATTTCATACAAAAA         CCGTTCTTGT TACGAC ACAAGAACGG          TTTTTTTTATGATTG 100 43
 LT978_19815 NONE
 LT978_19820 3957720 .. 3957743 +  -4.6  -5.16237   TCATATTGTAAAAGA          GACGTTTC GTTAATTG GAAGCGTC           TTTTTTCATGGGCTT  75 13
         dgk NONE
         dck 3959112 .. 3959139 +  -8.5  -5.50499   AATAAAAATAGCAAA        GCGATTTTCCC CGAACA GAGAAAATCGC         TTTTTTTGCATATAA 100 36
 LT978_19840 3960675 .. 3960695 + -10.3  -5.05228   CCGGGCAGCAAAAAA            GGCGCGCCT CTA GGGCGCACC            TTTTTATGGTTTGAT  93 13
 LT978_19870 3968020 .. 3968040 + -15.5  -3.61654   CTTGTAAACAAAAAA            GGCAGCTCA TGA TGAGCTGCC            TTTACCGTAAATATA 100 34
        dnaN 3979705 .. 3979726 -  -9.4  -4.70583   CTGATGAATAGAAAA           GCTGCCGA ACTAAG CCGGCAGC            ACATTCTGTTTGATT  90 39
        rlbA NONE
        recF NONE
 LT978_19910 3977993 .. 3978007 -  -2.1  -3.61654   TATATTCATTGTAAA               GATCC GCTAA GAATC               TATTTCTAACATAAA  48 17
        gyrB 3975989 .. 3976014 -    -7  -5.24129   CGCTTTGAGAAAAAA         GCCTTATTTC TTAACG AAAATAAGGC          TTTCTTGGTTAAATA  91 34
        gyrA 3973312 .. 3973345 - -13.3  -2.87564   TCATTTCTTTATATA     GTAAAAGCGCAGCCTG TTG CAG-CTGCGCTTTTTC     GTTTATACTTCTTCC  93 28
 LT978_19895 3971493 .. 3971505 -  -6.3  -4.09243   TATATTCCGTTAAAA                TCCTT AGA AAGGA                GGTGATCCAGCCGCA  68 20
 LT978_19890 NONE
 LT978_19885 3971162 .. 3971172 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 86
 LT978_19880 3968175 .. 3968192 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TGTT CTCTCAA              AACTAGATAACAGTA  67 55
         rrf 3968020 .. 3968040 - -15.5  -5.63517   CTTGTAAACAAAAAA            GGCAGCTCA TGA TGAGCTGCC            TTTACCGTAAATATA 100 41
        guaB 3965429 .. 3965453 -  -9.3  -6.02914   TCGATATAAAAAAAA          TAGACAGAGTC AGC GACCCTGTCAA          ATGTTTTTTATTTGT 100 46
        dacA 3963955 .. 3963978 -    -6   -4.4773   GTATATTAAGCAAAA          GAGCCCTAAC TTTC ATCAGAGCTC           TTTCTTATTTCTTAA  72 37
        pdxS NONE
        pdxT 3962016 .. 3962047 - -15.2  -5.80951   ATCGAAAATAAAAAA      GAGCCCTCATCCCC TAAA AGGGACGAGAGCTC       TCGCGTTGCCACCCT 100 274
        serS 3960675 .. 3960695 - -11.8  -5.14563   CCGGGCAGCAAAAAA            GGCGCGCC TCTAG GGCGCACC            TTTTTATGGTTTGAT 100 29
 LT978_19835 3959159 .. 3959181 - -16.4  -5.36441   TTTGCATATAAAAAA           TCCGCTGCAT CAG ATGCAGCGGA           CAAAACAATCTCCAA 100 76
        tadA 3955186 .. 3955200 -  -5.8  -4.67048   GCACGGCAAAATAAA               TATCAA ATT TTGATA               TGCGCACCATTCATG  74 86
         ffs 3954868 .. 3954888 - -11.9  -5.24989   TCATATACGAAAAAA            CTCACCTGC GTA ACAGGTGAG            TCTGAAATTTGATGA 100 49
        dnaX NONE
 LT978_19795 NONE
        recR NONE
 LT978_19785 3951821 .. 3951876 -  -7.7  -2.86125   GATAATGAAAAAAGG CTCCATGAATCTTCCCCCTCGCTTGT TTAGT ACAAGCTTATGAGAAGATTC-CGGAG AATAGACCTCTTACT  62 36
 LT978_19780 3951401 .. 3951411 -  -3.2  -3.55444   TGTTTAGTTTTCAAA                 GAAC TTT GTCC                 ATCGCTCTTGAAGCG  51 177
 LT978_19775 3949758 .. 3949770 -  -6.3  -4.09243   TATATTCCGTTAAAA                TCCTT AGA AAGGA                GGTGATCCAGCCGCA  68 20
 LT978_19770 NONE
 LT978_19765 3949427 .. 3949437 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 86
 LT978_19760 3946439 .. 3946456 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TGTT CTCTCAA              AACTAGATAACAGTA  67 55
         rrf 3946284 .. 3946304 - -15.5  -5.93252   TTCAAAAACAAAAAA            GGCAGCTCA TGA TGAGCTGCC            TTTACCGTAAATATA 100 41
 LT978_19750 3945937 .. 3945952 -  -3.2  -5.81412   TTCAGGCAAAAAAAA              GACCCT TTTC AGGGTT               AAGAATATAACGTCG  88 24
 LT978_19745 NONE
 LT978_19740 3943984 .. 3943994 -    -4  -3.57144   GTGTCCATTTTTAAA                 CAAA TCC TTTG                 CCTGTCTTTCTTATT  53 85
 LT978_19735 NONE
         tmk NONE
        darA 3941514 .. 3941530 -  -3.7  -4.17089   GTCAAATCCTTAAAA              TTGATGA AAT TCATCGA              CCGGGAGGACAAAGA  59 3
 LT978_19720 NONE
        holB NONE
        ricT NONE
        yabA 3938821 .. 3938843 - -10.6  -4.57569   GCACTCTTTGAAAAA           GGCTTCCG ACATCAG CGGAAGCC           TTTTCCTTATTTTTT  89 32
 LT978_19700 NONE
 LT978_19695 NONE
        rsmI 3936872 .. 3936897 -   -12   -4.9792   TATTTCATACAAAAA         CCGTTCTTGT TACGAC ACAAGAACGG          TTTTTTTTATGATTG 100 32
        metG 3934042 .. 3934083 -  -8.9  -4.56597   TTTCTTGTTGAAAAA CAAAAGGTGTTCGACG-GAA TGT TACACGTGAAACACCTTTTG CCCCTATTATTTAAT  86 32
 LT978_19675 NONE
 LT978_19670 3931754 .. 3931774 -    -9  -5.68023   TTATAACGAAAAAAA            CAGAGGGC GCAAA ACCCTCTG            AATGAATCGGAATTA 100 38
        rnmV NONE
        rsmA 3930212 .. 3930229 -  -7.7  -5.48213   GACGCAAAACAAAAA             GCCCTCT TAGA AAAGGGC              TTTATGCAATCCGTT 100 14
        yabG 3929137 .. 3929160 -  -8.2    -3.694   ATGTAAAATAATTAA          CCCGCATA GCGAAATA TATGCGGG           TTTTATCACTCATCC  73 35
 LT978_19650 3928672 .. 3928694 -  -8.5  -5.49568   AAGGCAAAACAAAAA           GCAGTAAAC AAAAG GTTCACTGC           CCATTAAAATGCTAC 100 29
 LT978_19645 3928315 .. 3928337 - -12.7  -5.37043   AGCCGATAGAAAAAA           CCGGGGAAC GGATT GTCCCCCGG           GCCACTGCATTATCG 100 35
        ispE NONE
        purR NONE
 LT978_19630 3926010 .. 3926032 -   -12    -5.626   TACTGCATAAAAAAA           GTGATCCCGG AGA CCGGAACCAC           TTTTCTGAGATTTAA 100 37
       spoVG 3925496 .. 3925538 - -10.6  -5.13473   ATCAGATTTAAAAAA GGACTGCCGGAAAAGGCC TTGTGTC AGCCTTTATCAGCAGTCC TTACATTTTGTTATG  93 42
        glmU NONE
 LT978_19615 3922981 .. 3922995 -  -2.8  -3.50808   CCTATTAGAACAATA               CCCA CAATAAC TGGG               ATTTAAACCTTAAAG  47 48
 LT978_19610 3922291 .. 3922315 - -10.1  -4.46926   CATTCTAGCACAAAA          GACGTAACC TCGGGCG GGTTACGTC          TTAAAGCGCTTATTG  89 35
         pth NONE
 LT978_19600 3921351 .. 3921379 -  -8.9   -5.2015   GCAAGAACAGAAAAA        CGCTTTGGTCTAG AAT CTACACCAAAGCT        TCTTATTGAATAAAT 100 28
         mfd 3917751 .. 3917761 -    -4  -3.83205   ATCCGTCACATCAAA                 TGTA ATA TACA                 CCAGAGAGTAACAAT  55 43
       spoVT 3917043 .. 3917068 - -10.5  -4.93316   TAAGAATATGAAAAA         GAACAGCACTT GTAT AAGAGCTGTTC          TTTCCCCGTTTTTTT  93 63
 LT978_19585 NONE
        mazG NONE
 LT978_19575 NONE
        yabP NONE
        yabQ NONE
 LT978_19560 3912193 .. 3912210 -  -3.5  -2.90075   GTTTGTTTAATTATA             CCTAAAT AAAA ATTTAAG              TGTCAACAAGGCTAC  45 37
 LT978_19555 3911705 .. 3911728 -  -5.3  -5.71712   GCGTATACAAAAAAA          GCACCCG-CT GGGAT AGACGGATGC          TCCATGTATTTATAG  95 52
 LT978_19550 NONE
 LT978_19545 3911410 .. 3911432 - -16.4  -5.32699   CTAAATATGAAAAAA           TCGGCTTCTG CAA CAGAAGCCGA           TTCGCTTGATGACCC 100 32
      spoIIE 3908741 .. 3908752 -    -3  -2.90573   TGATTTATACGAAAG                GATT AAGA AATC                 TCCTTTTTATTTTGG  43 16
 LT978_19535 NONE
 LT978_19530 3906945 .. 3906958 -  -2.3  -4.15884   CCAAGCAAAGAAGAA               GCATG AGCG CAGGC                GTCCGGCCGACATTA  54 38
        tilS NONE
         hpt 3904882 .. 3904897 -  -3.2  -3.67878   ATCATTCCAATACAA              CCGATA ACCA TCTCGG               AAGCAGGCAGCCGAT  51 40
        ftsH 3902855 .. 3902874 - -12.1  -5.58074   GAACCAGTAAAAAAA            CCGCCGG TATACG CCGGCGG             TTTTCATATCAGAAA 100 46
 LT978_19510 NONE
        hslO 3901069 .. 3901094 - -14.1  -4.02581   TTTTACAAAATAGAA         CAACCCGCTAA AGAG CTAGCGGGTTG          TTTCGTCACGAAGCT 100 15
 LT978_19500 NONE
        cysK 3899112 .. 3899131 - -10.7  -5.64274   TCAGGCACAAAAAAA            CTCCCGG ATACAG CCGGGAG             CCGTGTGTATGTCTC 100 40
        pabB NONE
        pabA NONE
        pabC NONE
        folP NONE
        folB NONE
        folK NONE
 LT978_19460 NONE
        dusB 3893158 .. 3893178 - -12.6   -5.1286   GAAAAAGCAGAAAAA            CTGCCAGC GGTAA GCTGGCAG            TGAGCAGCAATAGAG 100 49
        lysS 3891572 .. 3891601 -   -10  -5.00616   CTTGTTTCTAAAAAA       GCGCCG-TACTGC AATAA GCAGAAACGGCGC       CTTCCCTTTTATTAG  93 37
 LT978_19445 3889572 .. 3889582 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 179
 LT978_19440 3886585 .. 3886602 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TATT CTCTCAA              AACTAGATAACAGTA  67 55
         rrf 3886448 .. 3886463 -  -6.2  -2.88579   CTAATCCTCCATATA              TTACAC TTAC GTGTAA               TGGCTTGGCGGCGTC  54 28
 LT978_19430 NONE
 LT978_19425 NONE
 LT978_19420 NONE
 LT978_19415 3886067 .. 3886078 -  -4.4  -2.87564   CTACTTCCGCATACA                GGAT AACT ATCC                 TGTATAATGCGGGTG  48 33
 LT978_19410 NONE
 LT978_19405 3885887 .. 3885897 -  -2.4  -3.58208   GCGCATAATAATGAA                 TGCC GAG GGCC                 GGACTTGAACCGGCA  48 15
 LT978_19400 NONE
 LT978_19395 3885718 .. 3885732 -  -4.2   -3.0464   AAGTGATCGGGAAGA               CAGGAT TCG AACCTG               CGACCCCATGGTCCC  49 1
 LT978_19390 3885462 .. 3885478 -  -2.3  -4.17132   AAACTCTCCAATAAA              GTAGT TTGACTG ACTAC              GCACATCGCTGTGCG  54 173
 LT978_19385 3883747 .. 3883757 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 179
 LT978_19380 3880759 .. 3880776 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TATT CTCTCAA              AACTAGATAACAGTA  67 55
         rrf 3880604 .. 3880624 - -15.5  -5.69068   GAAAAACACAAAAAA            GGCAGCTCA TGA TGAGCTGCC            TTTACCGTAAATATA 100 41
        ctsR NONE
 LT978_19365 NONE
 LT978_19360 NONE
        clpC 3875813 .. 3875842 -  -9.4  -3.22874   CTCTATATAACAAAG       TGAGGCATACAC TCGCTT ACGTATGCCTCA        TGTTTGTCACTATAT  75 40
        radA NONE
        disA 3873271 .. 3873281 -  -4.6   -2.6043   CTAACAATAATATAC                 CCGG ATT CCGA                 CAGGTTTAAGCGATA  47 42
 LT978_19340 3872091 .. 3872102 -  -4.4  -3.34517   ACTCCCTCTTAAAGA                GCTT TCTC AAGC                 AGCTTGGGCTTGGCA  52 7
        ispD NONE
        ispF NONE
        gltX 3869105 .. 3869135 - -12.7  -5.93809   CGCCTATAAAAAAAA      GCGCCTCTG-CATG TAAA CATGACAGAGACGC       TTTTACCGCGCGGTT 100 251
        cysE NONE
        cysS NONE
 LT978_19310 NONE
        rlmB NONE
        rae1 3865319 .. 3865330 -  -2.2  -2.57013   CGTCAACCTAATCCA                GACCG CCT CGG-C                GCCACTTTTCAAACG  40 6
        sigH 3864556 .. 3864572 -  -5.1  -3.05579   TAATAAAATAGCACA              GTCAGAA AAA TTCTGTC              AATATGACACAGAAA  52 45
        rpmG NONE
        secE 3864042 .. 3864056 -  -8.6  -5.79595   GTGTAAAACAAAAAA               TAGGCT CAG AGCCTA               TGAATCCTTTTTTCA 100 114
        nusG NONE
        rplK 3862811 .. 3862840 - -13.7  -3.72027   ACCTCCCACGAATAA       GGGTTGCGAACTT GTGA AAACTCGCAACCC        GACAAGAAACAAATT 100 39
        rplA 3861885 .. 3861906 - -14.5   -4.9792   GATTTCATATAAAAA           GCCTCCATG TGGA CATGGAGGC            TGTATATACAAGCAT 100 180
        rplJ NONE
        rplL 3860850 .. 3860870 -  -7.5  -5.43974   AAAAGCAAAGAAAAA            GCCCGCCTC ATA AAAGCGAGC            TTCCCCTACAGGCAA 100 48
 LT978_19255 3860039 .. 3860059 -    -4   -5.8901   AGACAAAAGAAAAAA            GGGTTTCT AATTA AGAAAACC            ACATCCAAAAACAAA  93 162
        rpoB NONE
        rpoC 3852664 .. 3852698 - -13.1   -3.1315   AGAATAATTGTAATA    CTG-AGGAAAAGCTGT CGAA ACAGCCTTTCCTGCAG     CAGTTTCTATTATTC  95 35
 LT978_19240 3852246 .. 3852281 -  -8.6  -4.64763   TTAGGCAAAAAACAA    TGTCTTTACACAAGAT TGAT ATCTTATATAAAAACA     AAAAGTACGCTATAA  86 35
        rpsL NONE
        rpsG 3851246 .. 3851263 -  -4.9  -3.29471   TTTTGATTATATGAA             TC-CTACC AGC GGTAGTGA             GCAAATGCTTTGTTC  54 10
        fusA 3849050 .. 3849067 -  -6.3   -4.0827   ATAGAGTGATAGAAA             GTGAAAG CAAG CTCTCAC              TTCCTCATCTTACAA  68 75
         tuf 3847767 .. 3847788 - -11.5  -5.95539   GGGGAAACAAAAAAA           CGAGGCCCC ATAA GGGACCCCG            CATTATTGAACGAGT 100 44
 LT978_19215 3846543 .. 3846574 -    -5  -4.82901   TCTCCGTGAGAAAAA      CCTGATCACCTTGC CATG GCAAAGCGGCCGGG       TGTGTCAGCAACCTC  72 189
        rpsJ 3846166 .. 3846180 -  -2.9  -2.77523   CTCCTATTAAGATCA               TTCTA TATTT TAGAA               TTAAAGTTTGATTTC  42 26
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY 3836012 .. 3836023 -  -4.4   -3.2794   TCTTATTTAGAGGAA                TGGT TAAA ACCA                 GTCCTCTAATTTTTC  52 31
 LT978_19100 NONE
         map 3834554 .. 3834564 -  -5.4   -4.8622   GTGCGGAATGAAAAA                 CATG TGT CATG                 GAACTCATTTCATCA  76 42
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK 3832941 .. 3832974 -  -5.4  -3.66666   TTCAAAACGTCGAAA     CCTCGAATAGAATC ATATGA GATTCCATCCGAAA      TTCCCCATTGTTTAG  59 138
 LT978_19065 3831945 .. 3831964 -  -2.9  -2.55002   AAACACACGAAAATC            CTAGTTC ACATGG AAACTAG             ATCAATCGTCTTTGC  41 27
        rplQ 3831511 .. 3831524 -  -2.4  -2.87132   GCCCTTCTTTAGATA               CACA AAAATA TGTG                ATTAAACCAATTCGA  41 27
 LT978_19055 NONE
 LT978_19050 NONE
 LT978_19045 NONE
        truA 3828094 .. 3828104 -    -4  -3.34398   CGTGGGGTTGAAATA                 CATA CCA TATG                 ATATCTTATAACTTT  49 75
        rplM NONE
        rpsI 3827105 .. 3827124 -  -8.6   -5.9667   AAAAATACAAAAAAA            CCACAACC AAGA AGTTGTGG             TTTTTGCCATCCAAA 100 45
 LT978_19025 3826214 .. 3826235 -  -4.3   -5.4477   AAAGCCGCAAAAAAA           CAGCACCTC TGAC GGGATGCCG            TTTTTATATTTTAAT  81 29
 LT978_19015 NONE
        cwlD 3824398 .. 3824416 -  -7.4  -4.60255   AGAATCGGCGAAAAA             CCCTCC TTACTCG GGAGGG             TCTCCTTTTTCTGTA  79 13
 LT978_19005 3823242 .. 3823265 -  -8.1  -4.76213   AGAAAGCCAATAAAA          GGCCGGG-CC GTGTT GATCCCGGCC          CCTTTTTTATTCAGC  87 32
        kbaA 3821819 .. 3821845 -  -2.2  -4.56961   AACAGTCATATAAAA        GGCG-GCGACA TTGTCC TGCTGCACGCC         TCTGATTCAGCAACA  63 158
 LT978_18985 3819159 .. 3819169 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 179
 LT978_18980 3816171 .. 3816188 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TATT CTCTCAA              AACTAGATAACAGTA  67 55
         rrf 3816010 .. 3816024 -  -2.2  -3.03243   AGCTACTGCGGAATA               TTATAA GCT TCATAA               ACAAAAACATGGTAG  42 53
 LT978_18970 3815903 .. 3815951 - -10.9  -3.09516   TTCCTTACCATGGAA GTGCTCTACCTGCTGAGCTATGG AAG CAATGGCTCCGCAGGTAGGACTC GAACCTACGACCGAT  80 6
 LT978_18965 3815649 .. 3815670 -  -3.1  -3.77302   TTATGACAAAAGTAA           TTATATCAA GGTT TTGATAAAA            GTCAATACCGTTTAA  53 210
 LT978_18960 3815468 .. 3815482 -  -8.6  -3.38178   CAATCAATTTCACAA               TATCCC GTT GGGATA               AAATGGAGCGGAAGA  74 29
 LT978_18955 NONE
 LT978_18950 3814983 .. 3814999 -  -2.3   -3.8709   AAACTCTCCGATAAA              GTAGT TTGACTG ACTAC              GCACATCGCTGTGCG  50 310
 LT978_18945 3813269 .. 3813279 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 179
 LT978_18940 3810540 .. 3810557 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TATT CTCTCAA              AACTAGATAACAGTA  67 55
         rrf 3810379 .. 3810393 -  -2.2  -3.03243   AGCTACTGCGGAATA               TTATAA GCT TCATAA               ACAAAAACATGGTAG  42 53
 LT978_18930 3810272 .. 3810320 - -10.9  -3.09516   TTCCTTACCATGGAA GTGCTCTACCTGCTGAGCTATGG AAG CAATGGCTCCGCAGGTAGGACTC GAACCTACGACCGAT  80 6
 LT978_18925 3810018 .. 3810039 -  -3.1  -3.77302   TTATGACAAAAGTAA           TTATATCAA GGTT TTGATAAAA            GTCAATACCGTTTAA  53 210
 LT978_18920 3809837 .. 3809851 -  -8.6  -3.38178   CAATCAATTTCACAA               TATCCC GTT GGGATA               AAATGGAGCGGAAGA  74 29
 LT978_18915 NONE
 LT978_18910 3809352 .. 3809368 -  -2.3   -3.8709   AAACTCTCCGATAAA              GTAGT TTGACTG ACTAC              GCACATCGCTGTGCG  50 310
 LT978_18905 3807638 .. 3807648 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 179
 LT978_18900 3804651 .. 3804668 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TATT CTCTCAA              AACTAGATAACAGTA  67 55
         rrf 3804505 .. 3804522 -  -9.9  -5.71712   TTTTATATAAAAAAA             CCAGTTC ATCT GAACTGG              TTTAAAACAGCTTGG 100 35
 LT978_18885 NONE
 LT978_18880 NONE
 LT978_18875 3799734 .. 3799751 -  -8.4  -6.25741   AAATAAGAAAAAAAA             CGGCTC TCACTG GAGCCG              TTTCCGCTTTTATAA 100 35
 LT978_18870 3798069 .. 3798090 -  -8.7  -5.53288   TTTAACCGAAAAAAA           GCCCGGATA TATT CATCCGGAC            TTCACAAATTCTATG 100 36
 LT978_18865 3797005 .. 3797024 -  -9.3  -5.08824   GCTGTACGGAAAAAA            CCGCTCA CGTGAC TGAGCGG             TTTTTTTCATACTTG  91 10
 LT978_18800 NONE
 LT978_18795 NONE
 LT978_18790 NONE
 LT978_18785 NONE
 LT978_18780 3782844 .. 3782866 - -10.7  -5.61596   ATGCCGATAAAAAAA           GACACCTTT ATGCA AAAGGTGTC           TGAGACTGGGCTAGC 100 28
        sigW NONE
        rsiW 3781419 .. 3781444 -   -12  -5.60993   CGTTGCACAAAAAAA         GAGTAAAGCG ATTATA CGCTTTACTC          ATCTTCATTCGGGTC 100 20
        cdaA NONE
 LT978_18760 NONE
        glmM 3777275 .. 3777294 -  -6.4  -3.63283   AAAGTCAAATTACAA            GGGGAC TTTCAATC GTCCCC             TCCCACATGTTTTTT  65 386
        glmS 3775387 .. 3775411 - -12.9  -5.14563   TTCCGCATTAAAAAA          CCCCTCTGGCT AAT AACCAAAGGGG          TTAAATATATTATTC 100 35
 LT978_18745 NONE
 LT978_18740 3772735 .. 3772745 -  -6.8  -3.54543   AGTCATCCTCGTAAA                 CTGC TTA GCAG                 TTCACTTGGGTCGTA  65 82
 LT978_18735 NONE
 LT978_18730 3770773 .. 3770802 -  -4.3   -3.6761   TGCCTCCAACAAATA       TTAATCCGTCTCG AAAT CAAGATGGGTTAA        AATTCCTTTAATTAG  55 346
 LT978_18725 NONE
 LT978_18720 3768789 .. 3768810 -  -7.3  -5.08878   AACACATAAAGAAAA           GCTGACG GCATCATT CGTCAGC            TTTTTCACCTTTTAC  85 117
 LT978_18700 3765854 .. 3765866 -  -4.9  -4.35483   TTCCATCATAATAAA                TTTTC GTG GAAAA                TACAATTGTTTTTTT  66 281
 LT978_18695 3764280 .. 3764302 -  -9.9   -4.6902   GGACAAGCCGAAAAA           GACACCCCT GTAAG AGAGGTGTC           TTTTTGAATTATACA  89 34
 LT978_18690 NONE
 LT978_18685 NONE
 LT978_18680 NONE
 LT978_18675 NONE
 LT978_18670 NONE
 LT978_18665 NONE
 LT978_18660 3758058 .. 3758068 -  -5.4  -2.63913   TACTATTTTACATGA                 TTCC CAA GGAA                 AAAGATTACATTTCA  51 67
 LT978_18655 NONE
 LT978_18650 3757177 .. 3757197 - -18.3  -5.38549   CCGAAACAATAAAAA            GCCTCCCGG CGG CCGGGAGGC            TTTTTAAAACAGGAG 100 29
 LT978_18645 3756252 .. 3756264 -  -6.9  -4.15044   TTCCCCGTCAACAAA                GCAGG CAA CCCGC                ATCCCGAAGATATTG  71 154
 LT978_18635 3754245 .. 3754268 -   -11  -5.14563   TGCCCGATCAAAAAA          CCTTGCGGGA ACGT TACCGCAAGG           TTTTTATCAATCATT  93 39
 LT978_18620 3751244 .. 3751262 -  -8.9  -5.00611   CATAAATAAAACAAA             GCAGAGA ACGCA TCTCTGC             TTTTGATAGCTGGAT  91 56
 LT978_18600 3746114 .. 3746133 -   -15  -5.54907   CGGAGAAAATAAAAA            GCTGCCGC AGCT GCGGCAGC             TAAAACATTATAAGC 100 53
 LT978_18595 3745387 .. 3745410 -    -4  -2.94912   GCTGGAATTTATACA          TATTTTCTCA CTTG TCAGAAAATA           CATCAACCGGAGGTG  47 43
 LT978_18590 3744261 .. 3744298 -  -4.3  -5.18561   GAAATATTCAAAAAA   TAAAGACAAGACAGA TTACAAGC TCTATCCTGTCTTTT    GTGCTGATTCGAGCG  79 12
        purT 3743008 .. 3743035 -  -5.6  -5.63517   TGTCCAAACAAAAAA        GGCG-CCTTACCA TTA CGGTAAAAACGCC        TTTTAAGATCATTTT  86 39
        pssA NONE
 LT978_18575 NONE
 LT978_18570 3740739 .. 3740768 -  -5.7  -5.40625   ACACCATATAAAAAA       GAGGAG-CAGCTTT TAT AAAGCGGACGCCTC       CTCCTGTGACTCCGC  83 8
 LT978_18565 3740391 .. 3740417 -  -2.3  -4.40237   TATCATACAGGAAAA        CGGGCGAAAGAT GAAC AT-TTCCGTCCG         TACTCTTTCTTCCAG  59 41
 LT978_18560 3739332 .. 3739350 - -10.3  -5.56264   TGTAAACACAAAAAA             GACCACC TCATT GGTGGTC             TTTTCTATTAATCAA 100 33
 LT978_18550 3736603 .. 3736624 -  -9.5  -5.71638   CAATAACCAAAAAAA           GAACCC-TGC GGC GCAAGGGTTC           TTTTTCATTTATACT 100 34
 LT978_18525 NONE
 LT978_18520 3728871 .. 3728894 - -13.8  -4.66953   TGAAGACGCCAAAAA          GAGGGCGGCA TAAT CGCCGCCCCC           TCACTATTACTGTCA 100 215
 LT978_18515 3727558 .. 3727579 -  -9.4  -5.57054   AACAACGCAAAAAAA           CCCCGTCC ATCAAA GGACGAGG            TTTTCGCGGTGCCAC 100 310
 LT978_18510 3727238 .. 3727276 -    -9  -5.64873   TTGAAGAATAAAAAA   GCAGCTTGTAGAGAAAAC GAT GTTTTTTCTACAAGCTTT   TTTGTTTTGTGCTGT 100 63
 LT978_18500 NONE
 LT978_18495 NONE
 LT978_18490 3723825 .. 3723853 - -12.6  -5.26119   GCTTGAAAAATAAAA        GAACAGTTACCG CTTTT CAGTAACTGTTC        TTAGATACTTATATT 100 39
 LT978_18485 3723283 .. 3723307 - -18.7  -4.91473   TAAGGGAAAAATAAA          GGCTGTCGAGA TTT TCTCGACAGCC          TGAGCCCCTTAAAGG 100 67
 LT978_18470 3721918 .. 3721940 - -10.6  -5.69023   AAAACATTAAAAAAA           CACCGTTCAT TTT AAGAACGGTG           CCCCCGGGATTAAAA 100 35
 LT978_18465 NONE
 LT978_18460 3719688 .. 3719713 -  -6.8  -4.12532   CTCCTTATAGAGAAA         GAGGCAGAAG CGGATT CGTCTGCCCC          CATGTCAGGATTCAG  71 37
        tatC 3718878 .. 3718899 - -14.4  -3.07685   AAAAGCGCTCAAAAT           CGCCGCGG TGACCG CCGCGGCG            CATGAGGACGATATT  90 64
 LT978_18445 3717065 .. 3717089 -   -10  -4.79352   TCATTCATAAGAAAA          CAGCAGGCTC CCCGT GAGTCTGCTG          TTTTTTTATATACCG  91 31
 LT978_18430 3713586 .. 3713608 -    -5  -4.85918   TATTAGAGAAGAAAA           GGAAAAAATA GTG TATTTTTTAC           TGTTTTCAACAATTA  74 141
 LT978_18425 3712847 .. 3712872 -  -5.3  -4.54306   TGGAAGAAAAAAAGA         CCCCGGGATAT TCTC ATTCTCCGGGG          CTTTGAAACTGTTAA  72 37
 LT978_18420 3711636 .. 3711661 - -10.5  -5.24129   TTTCTGCAGAAAAAA         CCTTGAAAAGC ATGT GCCCTTCAAGG          TTTTTTGGCTGTGTC 100 41
 LT978_18415 3710581 .. 3710602 - -11.7  -4.29106   CCTGACAGCAAGAAA           GGAAATAGC GCAG GCTATTTCC            TTTTTTTATTTTCAC  93 37
 LT978_18405 3707970 .. 3707986 -  -2.2  -3.75707   CAAAGAGGGAAAAGA              GCCG TATTCAGAG CGGC              TGTTTTTCATACAAT  50 85
 LT978_18400 3705981 .. 3705991 -    -4  -3.85969   TAAAGAAAGAGAGAA                 TTCA CCA TGAA                 ACTACCAGTCAGAAT  57 521
 LT978_18390 3704719 .. 3704746 -    -7  -5.00765   AAGGAATCATAAAAA        GAACGATGAAAC CGAA GCTCCCTCGTTC         TTTTTTTCATTATGC  83 35
 LT978_18385 3703840 .. 3703858 -  -6.7  -5.63517   TCTCTAAACAAAAAA             GAGAAGG TTTCC CCTCCTC             TTTTATCTTTCCAGC  90 28
 LT978_18380 3702041 .. 3702071 -  -6.1  -3.78998   CCAAAGCAAAAGGAA      GC-GCCCCCGTTAC AAAA GAAACGAGGACAGC       AGCTAAGCGGATGAA  61 53
 LT978_18365 3699882 .. 3699907 - -14.1  -4.03234   TTTCCCGCATAGAAA         TAGTGTGCACC CCGC GGCGCACACTA          TGTTATTTAACCAAT 100 28
 LT978_18360 NONE
 LT978_18355 3698325 .. 3698370 - -24.2  -5.40474   ATTTCTGTAAAAAAA GCCGTCAAACGGCGCAGCAG ATGAGA CTGCTGCACCGCTTAACGGC GGTTTTTTCGTTCTT 100 18
 LT978_18345 NONE
 LT978_18340 NONE
 LT978_18335 NONE
 LT978_18330 3694391 .. 3694413 -  -6.3  -5.25803   AATCGGTACAAAAAA           GGAAGGAAA TGAAC TCTCCCTCC           TTTTTTGTTTTATTC  84 35
 LT978_18325 NONE
 LT978_18320 3691602 .. 3691626 - -12.1  -5.60993   TTTTTCACAAAAAAA          TCCCGCTTGCC GTA AGCAAGCGGGG          TGTGTGTTAATTCTT 100 32
 LT978_18315 3690299 .. 3690315 - -10.1  -5.52986   AGCTCACTAAAAAAA              GCACCCC AAA AGGGTGC              TCATTGCGCAAGCTC 100 26
       opuAA NONE
       opuAB NONE
 LT978_18300 3686919 .. 3686938 - -10.7  -6.02345   GAAGCATAAAAAAAA            GCAGCCC GTTACA GGGCTGC             TTTTTTTCATTACTT 100 35
 LT978_18290 NONE
 LT978_18285 3683633 .. 3683656 -  -6.8  -5.95539   TTTCAAACAAAAAAA          GAAACCACCT GTCA AGATGATTTC           TTTTTTATTTCTTTT 100 13
 LT978_18280 3681325 .. 3681352 - -15.8  -3.30771   CCAGATTGTTGACAA        CATCCTAAAACG GAAC CGTTTTAGGATG         TTGTATCTTTTCAGC 100 108
 LT978_18275 3680185 .. 3680212 - -12.8  -5.64006   AGCGAATTAAAAAAA        GCAGTACATGGC GTTT GTCATGTACTGC         TTTTTTGTTTACTCT 100 34
 LT978_18265 NONE
 LT978_18260 NONE
 LT978_18255 3676521 .. 3676538 -  -8.4    -5.626   GATCGTACAAAAAAA             GCAGGG ACACAG CCCTGC              CGGATCATAGCTTAT 100 37
 LT978_18245 NONE
        nadE 3673516 .. 3673535 - -12.2  -4.18213   AACGATAAACAATAA            CCTCCCTT TCAA AAGGGAGG             TTTTTTCATTCTATT  95 36
 LT978_18220 3670051 .. 3670069 -  -2.4  -3.58884   GCAATGAAAGAAAAC             CTATCCTT TAT AAGAAGAG             ATGAGTTTTTCTTTC  48 40
 LT978_18215 3669369 .. 3669392 - -11.8  -5.95449   AAAGAAAACAAAAAA          GCCGT-ACGCT CAC AGCGTCACGGC          TCTTTTTACATCGGC 100 31
         cah 3668269 .. 3668284 -    -9  -5.02074   TCATTCCTGAAAAAA              GCCCAA GTAC TTGGGC               TTTTCGCTGTCGTCA  91 38
 LT978_18205 3667434 .. 3667448 -  -5.7  -3.66095   AAAGGCGGACGGAAA               TGACG GCAAT CGTCA               ATTTCCGCCTTTTTC  59 23
 LT978_18200 NONE
        pruA 3664743 .. 3664770 -   -12  -3.57263   ATGTTTATGGTGAAA        TGGACACCCCCC GCGA GGAGGATGCCCA         TTCAGTCCCTCTTAA  90 37
        putP 3663195 .. 3663222 -   -15  -4.11216   CCTGTATCGTGAAAA        GAGGAAAAAGGG CGGT CCCTTCTTCCTC         TCGTTCCTTGCTTTT 100 39
 LT978_18185 3661815 .. 3661838 -  -9.7  -2.50381   GAAGGTATTAAAACT          GAAACCAGT ACGGCG ACTGGTTTC           TTTTTTATCTCTTTT  73 30
 LT978_18180 3660426 .. 3660440 -  -4.2  -4.64861   GCGCCGGAAAACAAA               TCGGCA TAT CACCGA               ACCCGAGAGGAAACC  68 220
 LT978_18155 NONE
 LT978_18150 NONE
 LT978_18145 3653059 .. 3653076 -  -9.9  -5.47218   TTTTATGCAAAAAAA             GAGCGAA ATTA TTCGCTC              TTTTCAATCGATTCG 100 16
 LT978_18140 3652655 .. 3652674 - -13.6  -5.98675   GATAAAAACAAAAAA            GCATCCGG CTTG CCGGATGC             TTAAGAATGATGATG 100 26
 LT978_18110 3649174 .. 3649196 -  -8.5  -5.49809   TAAACCGCAAAAAAA           GCACTCTAT TTTAC ATAGAGCGC           TTCAAAAAGATTCCT 100 27
       srfAA 3637748 .. 3637781 -  -7.5  -3.25015   GTGAAGTAGGAGGAA     GAATGC-GGATCAAGC AGC GCATGATACAGCATTC     CCTCCTGCATCGGTG  67 99
        comS 3634064 .. 3634076 -  -4.8  -4.07568   CGTTCCCCTTCAAAA                CTGC GCTCG GCAG                GACGCGGGAAATCAA  63 509
 LT978_18085 NONE
       srfAC NONE
       srfAD 3622424 .. 3622443 - -12.2  -5.24129   TTTTGTTACAAAAAA            CAGACAGC GAAT GCTGTCTG             TCATATCCTATAACA 100 33
 LT978_18070 3620994 .. 3621010 -  -9.4  -5.04175   GTAAGCATAGAAAAA              GGAGGG TATCC CCCTCC              TTTTTTTGTCAGCCT  91 34
 LT978_18035 3615513 .. 3615532 -  -2.9  -3.07283   GAAATTCCCTAAAAT            CCTGATA GGCCAT TATCAGA             TTCCTCCTTTTTGTT  44 21
        bsdC NONE
 LT978_18025 NONE
 LT978_18020 3613358 .. 3613389 - -11.6  -4.77567   AGGCGTACAATAAAA      GAGAAGCCTGCGGA ATCG TCCGCAGGCTTTTT       TTGTGCGTCTATCGT 100 34
 LT978_18010 3609756 .. 3609766 -  -6.8  -3.09842   TCAGGTAAAAAAGAT                 GCCT GAC AGGC                 GCAAGGCTGTATTGT  60 112
 LT978_18000 NONE
 LT978_17995 3606570 .. 3606583 -  -2.3  -2.70525   TCTCCTCAAATCAAT               CATGC TCAA GCTTG                TCTGAGAGAGGATTA  40 7
 LT978_17990 3605401 .. 3605424 - -12.5  -4.63527   TCATGATTTTAAAAA          TAACCCGGC GCATCG GCCGGGTTA           TTTCTTCGAAACTGT 100 23
 LT978_17985 NONE
 LT978_17980 NONE
 LT978_17975 NONE
 LT978_17970 NONE
 LT978_17965 NONE
 LT978_17960 NONE
 LT978_17955 3598504 .. 3598524 - -11.9  -3.57263   AGTTTCACGGTCAAA            GAAAACGGC ACG GCCGTTTCC            TGATACCGCGCCCCT  90 132
 LT978_17940 NONE
 LT978_17935 3594051 .. 3594074 - -11.7  -2.96141   GTGAAGATAAAACAG          CCGGCAGCC AGACGG GACTGCCGG           TTTCAAGATGATTCA  82 28
 LT978_17930 NONE
 LT978_17925 3592619 .. 3592645 - -13.1  -5.75342   GCCGCGCAAAAAAAA        GACTG-CCGGGA ACAT TCCCGGGCAGTC         TTTTCCTTTGTTCAG 100 53
 LT978_17910 NONE
 LT978_17905 NONE
 LT978_17900 NONE
 LT978_17895 3586913 .. 3586940 - -16.4  -4.98531   GCGGTAAACCAAAAA        GAACCCGATCAC GTAT GTGACCGGGTTC         TTTTTTTACTTCTCG 100 31
 LT978_17870 3582899 .. 3582913 -  -8.5  -5.93809   GGCGCATAAAAAAAA               CCCCG GAATT CGGGG               ACTTATTTACCAGCG 100 32
        gabT NONE
        gabD 3578539 .. 3578558 -   -15   -5.7946   CGCTCAATAAAAAAA            GCCCCGCT TAGA AGCGGGGC             TTTCTTTTCGGCTCA 100 41
 LT978_17850 NONE
         gdh 3576712 .. 3576741 -  -9.4   -4.8622   GCGTGTAAGCAAAAA      GCGATC-C-GGCTC TAAA GAGCCTGCGATCGC       TTTTTTTCTTATCCG  91 34
 LT978_17825 3573309 .. 3573328 -  -8.6  -6.09888   CCTTAACAAAAAAAA            GACACCTC ATCA AAGGTGTC             TTACCGCTTTCTGTA 100 26
 LT978_17820 3571682 .. 3571695 -  -2.4  -3.08679   TCGCTTTAGCCAATA               CTTC CATGAT GAAG                ATCCCTCTTTCTGTT  43 44
 LT978_17815 NONE
 LT978_17810 3570106 .. 3570126 -   -14   -5.5074   TAACGCAAGAAAAAA            CCCGCGTC CCCCC GACGCGGG            TTCATTTTTATTGAT 100 33
 LT978_17805 3569646 .. 3569663 -  -9.8  -3.53224   CACGCTTGTCCGAAA             GCCGCC GGTGGA GGCGGC              TTTTTTTACGATGGC  79 31
 LT978_17795 3568555 .. 3568577 - -12.8  -6.14618   GACAAAACAAAAAAA           GAGAGCCTCA TGC TGAGACTCTC           TCTTTTTTCTATTAT 100 37
 LT978_17790 NONE
 LT978_17785 3566382 .. 3566397 -  -3.2  -2.62184   TGGTTTTTCATATCA              TCAGCT CCAT AGCTGC               GGCATTTGCGAGAAT  43 10
 LT978_17780 NONE
        pxpB NONE
 LT978_17770 NONE
 LT978_17765 3563057 .. 3563067 -    -4  -3.28745   CGGTCAATAACCTAA                 TTTC TCA GAAA                 TATGCTGTGCGGCGT  49 3
 LT978_17760 3562309 .. 3562335 - -13.7  -4.33105   TAAGGAGCACGAAAA         GCGCGCTCCCC ATGAA AAGGAGCGCGC         GGTTTATGAGCTGGC 100 29
 LT978_17755 3561828 .. 3561844 -  -2.1  -4.61147   GAAGATCATACAAAA              GGCTTTC GCG GATCGCC              GGAATATCAGGAGTG  63 108
 LT978_17745 NONE
 LT978_17740 3558421 .. 3558464 -   -30  -2.64422   AGACATTGCACACCA CATAAACAAACGCCCGGAAG ATAC CTTCCGGGCGTTTGTTTATG GAATATCGCAGCCTT 100 21
 LT978_17735 3556051 .. 3556070 -   -10  -5.65177   ACATGCAGAAAAAAA            CACACCCC ATAT GAGGTGTG             CGCTTTCTGTTTACC 100 36
 LT978_17730 3554307 .. 3554340 - -16.3  -3.20164   TCACATGGAACGCAA     GAA-AAAAACCCGGCT GGC AGCCGGGTTTTTGTTC     TCTATTATGAACGTA 100 30
 LT978_17725 NONE
 LT978_17720 3552788 .. 3552808 - -11.2  -5.71712   TTCCATACAAAAAAA            GATGAGGC GTGCA GCCTCATC            CTTAAATGCGCGGGT 100 27
 LT978_17715 NONE
 LT978_17710 3551251 .. 3551271 - -10.4  -5.71712   GTTTACATAAAAAAA           CCGC-CCGG ATGT CCGGCGCGG            TTTTGTCTTATTCTT 100 424
 LT978_17705 3550329 .. 3550349 - -11.2  -5.52023   ATTATCAATAAAAAA            GCTCCTCT TCTGC AGAGGAGC            TTTTTTCATGCGTTA 100 38
 LT978_17695 NONE
 LT978_17690 3547137 .. 3547162 -   -12   -5.0095   AAAAACACAACAAAA         GGCAGCATTT CTTTAC AAATGCTGCC          TTTCTCTGATCTATT 100 36
 LT978_17685 NONE
 LT978_17680 NONE
 LT978_17675 NONE
 LT978_17670 NONE
 LT978_17665 3539913 .. 3539931 -  -7.4   -5.9667   AAAAATACAAAAAAA             GAGGCC TGTTAAC GGCCTC             TTTTTCCTTCATTAC 100 37
 LT978_17660 3537653 .. 3537677 -  -9.3  -5.24129   CTCCTTTACAAAAAA         GACCGC-GGC ATTTCA GCCTGCGGTC          TTTGCCGTTACTTTT 100 33
 LT978_17655 NONE
 LT978_17650 3535362 .. 3535384 - -13.6   -5.5454   GTAAATAAATAAAAA           TAAACAGGCA TGC TGCCTGTTTA           TTTTTTATAACCACC 100 47
 LT978_17640 NONE
 LT978_17635 NONE
 LT978_17630 NONE
 LT978_17625 3532920 .. 3532950 - -11.9  -4.25104   GCGCCCGGACGAAAA       GGAGCGCTCCC TTTCGATTT AGGAGCGCTCC       CATTGATTTTTTCTT  95 234
 LT978_17610 NONE
 LT978_17605 NONE
 LT978_17600 3529562 .. 3529583 -    -8   -5.4387   ACACAAACGAAAAAA           TCCCGCAA TTTTCG TCGCGGGA            TTTTTGGGATTATGG 100 68
 LT978_17595 3527979 .. 3528015 - -15.3  -4.15788   AAGCCGCTCAACAAA    CAAAGGAGCTGTCGAGA TCT TCTCGATAGCTCTTTTG    TTTGTCCTTGAATGA 100 370
 LT978_17565 3523106 .. 3523127 -  -8.7  -5.10064   CGGAATATAGAAAAA           CCCCGCTCT CAAG AGAACGAGG            TTTTTCTGCTTATAA  91 35
 LT978_17545 3521028 .. 3521050 - -12.2  -4.59089   GAACTGATAAACAAA           GAAAACACAT TGA ATGTGTTTTC           GGGTGGTTTTTTATC 100 39
        gsiB 3520524 .. 3520561 -   -23  -4.09511   AAGATTTTCCCAAAA   TCAAAAGCGATCCGGC TGATGT GCCGGATCGCTTTTGA    TCTGCAGGTTGTCTG 100 56
 LT978_17535 NONE
 LT978_17530 3519744 .. 3519757 -  -3.7  -5.83211   GACGAAAATAAAAAA               GCCTC TAAA GGGGC                TTTTTTTATGTGCGC  89 31
 LT978_17515 NONE
 LT978_17510 NONE
        dctP 3514033 .. 3514059 - -16.7  -5.40072   GGCGGCCGAAAAAAA         GAACGGCATGC CGGAT GCATGCCGTTC         CTTTCCTTTTATACC 100 34
 LT978_17500 3512763 .. 3512784 -    -8  -5.13354   TTCACAAAAAATAAA           CAGTGCCC GTACAT AGGCACTG            TCTGCATTATAACAT  89 74
 LT978_17495 NONE
 LT978_17490 3511058 .. 3511069 -  -2.2  -3.07962   CTTTATACCCGAACA                TCGC GTTT GCAA                 AAGCTCCACCAAGCG  43 1
 LT978_17485 3510590 .. 3510613 -  -9.6  -5.60993   GGCTGTACAAAAAAA          CACGCTATCC CATA GAATAGCGCG           TTCAGACTGCTTCCG 100 27
 LT978_17480 3509332 .. 3509348 -    -8  -5.04597   AGCCATACATAAAAA              GAGCCT TTTTC AGGCTC              TTTTTTTTATTGCTC  89 32
 LT978_17465 3507844 .. 3507860 -  -2.2  -4.66535   AACGGCGAAAAGAAA              GCGC ATCTTCACA GCGC              AAACGCGAAAACGCC  67 74
 LT978_17455 3506324 .. 3506347 - -13.2  -4.13767   TCTGTTACGGGAAAA          GACACTGCCC CTTC AGGCAGTGTC           CGTCTTCATTAAAAT 100 34
 LT978_17450 3504636 .. 3504658 -  -8.5  -4.77438   ATTTACCACTAAAAA           CTGCCCTTT CATCC AAAGGACAG           GATCATACGTATACA  87 276
        cshA 3503061 .. 3503083 - -12.7  -5.50499   GCATATCGAAAAAAA           GCGGACCCC GTAAA AGGGTCCGC           TTCCTGTGTTTTAGT 100 36
 LT978_17440 NONE
 LT978_17435 3501033 .. 3501053 -    -9  -5.52384   CGTGCAGCAAAAAAA           GCGG-CGGT ATTA ACCGTCCGC            TTTTTCATATGAATA 100 14
        acpS NONE
 LT978_17420 3498785 .. 3498805 -  -8.9  -5.29385   AATGGAATCAAAAAA            GAGACCGAC AGC GGCGGCCTC            TTTTTTGACATTATT 100 36
         alr 3497465 .. 3497478 -  -3.9  -2.91912   TCATCCATCCAGACA               TAATG ATAC CATTA                TTCAAACGTCAAGCA  47 77
        endB NONE
        ndoA 3496744 .. 3496762 -  -8.9  -6.09196   TCGAAAACAAAAAAA             GTTGCTC TATAT GAGCAAC             CAAAATATGACTAAA 100 36
 LT978_17400 NONE
        rsbS NONE
 LT978_17390 3495068 .. 3495080 -  -5.5  -3.06133   TAACCTCCTACCGAA                GCCAT TTT ACGGC                TTGAATCTCTGTTCC  54 5
 LT978_17385 NONE
        rsbV NONE
        rsbW NONE
        sigB NONE
 LT978_17365 3491807 .. 3491828 -  -6.6  -5.80817   CGGAACATAAAAAAA           GCAGCCTT ACGATA AAAGCTGC            CCGAGAATATAGGTC 100 10
 LT978_17360 3489560 .. 3489577 -  -9.9  -5.71712   TTCTACAGAAAAAAA             CACTGCT CGTA AGCAGTG              CTTTTATTTTACCAT 100 29
 LT978_17350 3488849 .. 3488865 -  -6.6  -3.00946   TTTTTTGAGAAAGCA              TCGTTG TCTCT CAACGA              CTTTTATAATTTAAC  58 69
 LT978_17345 NONE
 LT978_17340 NONE
 LT978_17335 NONE
 LT978_17330 3488412 .. 3488423 -    -3  -4.69027   AAAGTGATTCAAAAA                TTTC AAAT GAAA                 TGGCTGGGCTAGCTG  62 26
 LT978_17325 NONE
 LT978_17320 3488195 .. 3488211 -  -5.1  -2.64765   TAAGCATATAAGCTA              GTGATGA TGA TCAGCAC              TTTGAAAAGAAAGTG  49 39
 LT978_17315 3487761 .. 3487788 -  -8.6  -5.50499   TTATAGCCAAAAAAA        GACTTAACCTTT TAAA AAAGATTAAGCC         TTTTCAGTACCTTTA 100 310
 LT978_17305 3486752 .. 3486780 -  -5.4  -5.48303   ATAAGCGCAAAAAAA        TACCAAGGAT CTCTCTATT ACCCTTGGTA        TCATTGGGATGCGGC  83 323
 LT978_17295 3485242 .. 3485261 - -12.2   -5.4182   AATTAGAAAGAAAAA            GAGCAGGA GTAA TCCTGCTC             TTTCATTCAAAACTT 100 379
 LT978_17285 3482813 .. 3482841 - -11.8  -5.58522   TACAGAAAATAAAAA        GCCAGCTCTCCT TCGGG AGAAGAACTGGC        ATAACAAAGCTTCTT 100 275
 LT978_17270 3480126 .. 3480151 -  -8.4  -5.72622   TCTATAAACAAAAAA         TACCAAAGGT GTCAAA ACCCTTGGTA          TCATAGGGATCGGCC 100 102
 LT978_17265 3479798 .. 3479825 - -11.4  -5.62288   TCAATAAAACAAAAA        GGGACTGGA-TCA TAT TGAATCCAGCCCC        GAATTGATATTGATT 100 63
 LT978_17255 3478413 .. 3478434 - -13.1  -3.27177   CTTAAAAGGAAGATA           CCATTAGCG ATGA CGCTAATGG            CGCCCTTTGTTTCTA 100 50
        cspC 3477657 .. 3477678 -    -8  -5.84432   GAGAACATAAAAAAA           CAGGCCCT ATATAA AGAGCCTG            TTTGTATAAACGATT 100 46
 LT978_17240 3476443 .. 3476474 -  -3.1  -5.28414   TAATAAATATAAAAA      TTCGTCAACCT TAAAGATGAT AGGTTGATGAA       TTTTTTTATCGGCTC  75 31
 LT978_17235 3475722 .. 3475732 -  -5.4  -3.02511   GTTATTTGTTTAACA                 CCAT GCA ATGG                 GAAAAAACGTCGAAA  53 123
 LT978_17230 NONE
 LT978_17225 3474607 .. 3474618 -  -2.2  -3.41229   ACATCTTTATCAGAA                GGAA TTTT CTCC                 AAGATATCTTCTACG  46 207
 LT978_17215 3473375 .. 3473397 -  -2.7  -5.27335   CCTTTCAAAGAAAAA           GGGCATC TTTGTATTC GATACCC           TTTCACATTCATTAG  73 37
 LT978_17210 3472091 .. 3472101 -  -8.2  -3.33815   ACTTGCTTTAAGTAA                 CGGC GCA GCCG                 CAAACAAAAAAATAC  70 497
 LT978_17205 3470783 .. 3470795 -  -3.3  -4.03234   CTGGGTTTATATAAA                CAGCC CAT GGCTT                AGCGGAACTCGGTAT  58 462
 LT978_17185 3468288 .. 3468313 - -10.6  -4.94222   AACAATTTATAAAAA         GCCTTAACTT TGGGTG AAGTTAAGGC          TTCCGTTATTTCCCC  93 67
 LT978_17175 3466233 .. 3466251 - -10.3  -5.38951   AATTCATACAAAAAA             GCCTGAC GAGTT GTCAGGC             TTTTAATTGGCTGTT 100 20
 LT978_17170 NONE
 LT978_17165 3464352 .. 3464365 -  -2.4  -4.81843   AATAATTAAAATAAA               GCAA AAATAA TTGC                CGAAACAGTGATGAC  64 2
 LT978_17160 3463073 .. 3463119 - -15.4  -6.28401   TAAAAAACAAAAAAA CAAAGAAAGACAGCACTGACTG ATT CAGTAATTGCTGTTTTTCTTTG TTTCATGTGTTTTAG 100 37
 LT978_17150 3460671 .. 3460694 -  -8.9  -5.71712   GTTGACATAAAAAAA          GCCAAAGGC GGTTAA ACCTTTGGC           ATGATTGATACGCCG 100 152
 LT978_17145 3459166 .. 3459189 -  -8.3  -5.42862   ACACGCGCAAAAAAA          CCATACAAT ATAGTA ATTGTATGG           CGGACAATATTAGAT 100 35
 LT978_17140 3457700 .. 3457725 -  -6.2  -5.53436   AGAGAACATAAAAAA         TACCAAAGGC CGTTAC ACCCTTGGTA          TCATTGAGATGCAGC  89 108
 LT978_17135 3457132 .. 3457149 -  -4.9  -3.61398   CCTTCGGTGTAATAA             GGCAA-TC GTT GACTTGCC             TGTTCAATATCAACC  57 104
 LT978_17130 3456609 .. 3456631 - -16.4   -5.1286   TAAAAATGATAAAAA           GGATGCTGCA CGC TGCAGCATCC           TTCTGTACCAACTTT 100 73
 LT978_17125 3455791 .. 3455822 -  -3.9  -6.47325   AAAAAACAAAAAAAA     GACAAGAG---CGGCA AGC TGCCGAAACTCTTGTC     TCTCCTGCCATGATA 100 243
 LT978_17120 3454262 .. 3454283 -  -8.7  -5.31855   TAGCAACAATAAAAA           CACACCTGA ATGT TCTGGTGTG            TTTTTTATTTTGTTT 100 56
 LT978_17110 NONE
 LT978_17105 3451679 .. 3451705 -  -6.7  -5.48063   ATTCAACACAAAAAA         GAGCAGTAA ACACGTAAG TTACTGCTC         TCCACAGTCTATCCG  89 34
 LT978_17085 3448967 .. 3448986 -    -5  -2.89822   ACAATAATCACCATA            TCATAAGG GTTC CCTTATGT             AAAGTTAAACAAATG  51 148
 LT978_17080 3448703 .. 3448722 -  -8.6  -5.64274   TCAGGCACAAAAAAA            CACCGACA CAAT TATCGGTG             TTACGCTTAAATAAC 100 65
 LT978_17075 3447507 .. 3447525 -  -3.2  -2.66216   TTTTATCACGATAAC             CATTTTAT GTT ATCAAATG             AAATAATATGAAGTC  43 62
 LT978_17070 3447010 .. 3447034 - -12.9  -5.26875   GCCGGAATTAAAAAA          CACCAAGGGTC TGT GACACTTGGTG          TTTTTGGAACGCGGG 100 60
 LT978_17065 3445925 .. 3445946 - -10.3  -5.25803   AATTCTCATAAAAAA           CATACCAAT ATCT ATTGGTATG            TTTTTTTCAGCCCAG 100 49
 LT978_17055 3444240 .. 3444259 -    -5  -6.14618   TAGAAAATAAAAAAA            CCAAGG CTCGTTTC CCTTGG             TACATTTCATGCGGC 100 64
 LT978_17050 3442751 .. 3442780 - -13.7  -3.72576   TTGGCTGTCATGAAA       GAAAAAAGGCGCC GAAC GGCGCCTTTTTTT        ATCTTTTATTTCGTA 100 31
 LT978_17040 3440591 .. 3440612 -  -8.1  -5.73339   ATAATCAGAAAAAAA           CATACC-GCA TGC TGCCGGTATG           TTTTTAACATGCTTG 100 41
 LT978_17025 3437886 .. 3437906 - -14.1  -3.73904   AAATAGAGCGAAGAA            GGCAGAACA ATT TGTTCTGCC            TTTTCATTATTTTCT 100 84
 LT978_16995 NONE
 LT978_16990 3433079 .. 3433098 -  -7.2  -6.02914   TTCACATAAAAAAAA            CGTACATA GGGG CATGTACG             TTTGGGCAGTTTTTC 100 42
 LT978_16985 3430835 .. 3430853 -  -9.6  -5.74122   CAGCACATAAAAAAA             GCAGATCA TAA CGATCTGC             TTTTTCATTTTATTC 100 35
 LT978_16960 3425096 .. 3425118 - -17.8  -5.28826   AAAGGGCATAAAAAA           CCAAGGGCTG TAA CAGCCCTTGG           TTCCGGGTCACGCGG 100 50
 LT978_16955 3423774 .. 3423793 - -10.8  -5.52384   CGGGCATCAAAAAAA            GGAGTGAA TCAT TTCACTCC             TTTTTTGCTTTCTCC 100 19
 LT978_16945 3421542 .. 3421561 -   -15  -3.85165   TATTTTAAACTGAAA            CGGGAGGC GGCC GCCTCCCG             TTTTTTCTGTTCTTC 100 39
 LT978_16930 3419062 .. 3419102 -    -2    -3.551   CCCTAACGGAGAGAA GCGCAGTCACTT-TCCTCC ATTAAG GGCGGAGAAGTG-CTGC-C GGTACATCATGTTCA  48 144
 LT978_16925 3418099 .. 3418119 -  -9.8  -5.04325   GGGAAATCAGAAAAA            GCCATTCA TTTGC TGAATGGC            TTTTTTTCATTTTCT  93 39
 LT978_16920 NONE
 LT978_16915 3416493 .. 3416549 - -11.9  -3.53094   CTCAAATCAAGAACA GT-TAATACGAAAAAACCGC-GGGCAG GAAAA CTGCACAGCGGTTTTTTCGTCTCAGAC GGGACGGAGCGCGCA  90 20
 LT978_16905 3414556 .. 3414576 -  -7.6  -5.42862   ACATCGGCAAAAAAA            GACAAGGC TTTTC ACCTTGTC            TATCGTGATGATGCG 100 25
 LT978_16900 3413200 .. 3413229 - -11.6  -4.92783   AAGCCATTATAAAAA       GCCTGTTTCC-CT TTGGC AGAGGAAACAGGC       TTTTTCCATGTATTA 100 38
 LT978_16890 3412388 .. 3412402 -  -7.1  -3.77464   ACACCAGTCAGTAAA               CTGCC GTTCA GGCAG               CCGCGGAGGTTTAAT  70 50
 LT978_16885 3410680 .. 3410690 -  -2.6  -3.25072   TGCAGTATAATTTAA                 TTAT CAG ATAA                 TAGGGGGAACTCATC  46 267
 LT978_16875 3409910 .. 3409929 -   -10  -5.07567   TGAGACCGCAAAAAA            GCCAAAGG AGTT CCTTCGGC             TTTGGCGGTCTTTTT  93 39
 LT978_16865 3407651 .. 3407671 -  -6.9   -5.7946   GCGGCAACAAAAAAA            GAGTGAG TTTTTCT CTCACTC            TTCGGCGCTTTTATG 100 36
 LT978_16860 NONE
 LT978_16855 3405640 .. 3405664 - -12.2  -5.63517   TTTTTAAATAAAAAA          CAAAGGACCC TAAGC GGGCCCTTTG          TTTTTTTATGCTGTT 100 31
 LT978_16820 3399808 .. 3399828 -    -9  -4.26589   ATTACATATTGAAAA            CCCCCAAC TGCTG ATTGGGGG            TTTTTGTTTTATTCT  83 34
 LT978_16815 3397952 .. 3397973 -  -8.7  -5.50774   TATAATAAATAAAAA           GCAGGATTC CCAG GAACCCCGC            GTCTATTCAGATTAC 100 37
 LT978_16810 NONE
 LT978_16805 3397377 .. 3397398 -  -6.7   -3.3382   TGGATCACAGACTAA           GTTCACTGCA TCC TGCAGT-AAC           GTCTGTGTGATCTGC  61 149
 LT978_16800 3395647 .. 3395657 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 179
 LT978_16795 3392660 .. 3392677 -  -8.5  -2.96873   ATCGCCACCAAACCA             TTGAGAG TGTT CTCTCAA              AACTAGATAACAATA  67 55
         rrf NONE
 LT978_16785 NONE
 LT978_16780 3392276 .. 3392294 -  -8.9  -4.84146   ACGATATAAAAGAAA             GCTTGGT TAGAT ACCAAGC             TGCCAGCATTAAAAG  88 89
 LT978_16775 NONE
        tsaE NONE
        tsaB NONE
        rimI NONE
        tsaD 3388527 .. 3388550 -  -8.2  -5.71638   TAATAAGTAAAAAAA          GCCTCACATT TTAC AACGTGAGAC           GATCAAAGGATGTTA 100 12
        moaC NONE
 LT978_16740 NONE
 LT978_16735 NONE
        tatC 3384100 .. 3384135 -   -15  -5.16681   CCAAAAATAATAAAA    GAAAAGCCATTTCTCA TCAT TGAGAAATGGCTTTTT     TTATGCTGATACGTC 100 26
       groES NONE
        groL 3380945 .. 3380962 - -11.3  -5.77734   AAACAAAAAGAAAAA             CCCCTTG AAAT CAAGGGG              TTTCGGCACTCTTTA 100 38
 LT978_16685 NONE
 LT978_16680 NONE
 LT978_16675 3376294 .. 3376310 -  -2.2  -2.87132   TTGCCTCCTGATATA              TCCAGT TGTTC ACTGGT              AAAATTTAATTAATG  41 47
 LT978_16670 3375691 .. 3375710 -  -2.2  -4.18488   ATCTACTTTAAGAAA            CTGAT-TGA TTT TCATACCAG            CACCGCCTGCCTTTC  54 17
 LT978_16665 NONE
 LT978_16660 3375212 .. 3375225 -  -3.1   -4.2679   TAATCTTTACCAAAA               GACCT TTTG AAGTC                CACTCTGCCAAGTGG  60 48
 LT978_16655 NONE
 LT978_16650 3374017 .. 3374033 -  -3.7  -2.63382   TTTTATATTGAGAAT              TTGACAT GTA ATGTCTA              TCAATCTCGTTAGAG  45 35
 LT978_16645 NONE
 LT978_16640 NONE
 LT978_16635 NONE
 LT978_16630 3371398 .. 3371408 -  -3.2  -2.66216   TGGCAGCAGGATAAC                 CGCT TTA AGCA                 CTGTGCATCAGCTCC  43 19
 LT978_16625 NONE
 LT978_16620 NONE
 LT978_16615 3370040 .. 3370063 -  -2.2  -2.85999   CCAGTTCATATCAGA          GCATCGGGGC TTCG GCTTCGGTGC           TTTTTTACGTTTTAC  41 37
 LT978_16610 NONE
 LT978_16605 NONE
 LT978_16595 NONE
 LT978_16590 NONE
 LT978_16585 NONE
 LT978_16580 NONE
 LT978_16575 NONE
 LT978_16570 NONE
 LT978_16565 NONE
 LT978_16560 NONE
 LT978_16555 NONE
 LT978_16550 NONE
 LT978_16545 3364792 .. 3364838 - -16.7  -5.63517   CGCTCAAATAAAAAA CGGACACCAATCAGAGCACAG TGATT CTGTGCAATGATCAGTGTCCG CAGGCTTTCCGTCTT 100 49
 LT978_16540 3364100 .. 3364129 -  -2.9   -5.4505   TTCTCCAATAAAAAA       GAGCCTATTCACGC TAA ACA-GAATAGGCTG       TGATCTGCTCTATTT  76 4
 LT978_16535 3363833 .. 3363854 - -10.2  -3.16191   CTATACTTGGAGCAA           GGGAGAAG CGCTAC CTTCTCCC            TCGGCTCAAAATCAT  76 37
 LT978_16530 3363337 .. 3363354 -    -7  -5.27779   CGTAAGACGAAAAAA             CACCCT TTTGAC AGGGTG              CTCATTTCCGCCTAT  91 27
 LT978_16525 3363011 .. 3363024 -  -8.1  -5.84432   GAGAACATAAAAAAA               CACCC CGAA GGGTG                TTCATCACATTAGCT 100 35
        terS NONE
 LT978_16515 NONE
 LT978_16510 NONE
 LT978_16505 NONE
 LT978_16500 NONE
 LT978_16495 NONE
 LT978_16490 NONE
 LT978_16485 NONE
 LT978_16480 NONE
 LT978_16475 NONE
 LT978_16470 NONE
 LT978_16465 NONE
 LT978_16460 NONE
 LT978_16455 NONE
 LT978_16450 NONE
 LT978_16445 3353578 .. 3353598 - -12.5   -5.0538   TTGTATGTTAAAAAA            GAGCCCGGG AAG CCCGGACCC            TATGATTCCTTTTCT 100 25
 LT978_16440 NONE
 LT978_16435 NONE
 LT978_16430 NONE
 LT978_16425 3346817 .. 3346828 -  -4.4  -3.09787   TGAAAGTATATAAAT                GTCA GCCA TGAC                 CGGACCTCCTTACAA  50 35
 LT978_16420 NONE
 LT978_16415 NONE
 LT978_16410 NONE
 LT978_16405 3342905 .. 3342924 -  -4.3  -5.48213   GAGGCAAAATAAAAA            CACCTAT TCAGTT ACAGGTG             CTGATTCACTATTAT  81 9
 LT978_16400 3342442 .. 3342462 - -10.4  -5.56264   TTGAAATATAAAAAA            GCAGCCGG GTTAA CCAGCTGC            CTGATCGTCTTTTTC 100 14
 LT978_16395 3341403 .. 3341423 -    -9  -4.09509   ATTAACTCATACAAA            GCCCCCTT AGAAA AAGGAGGC            AGCTTTGGATTACTT  79 35
 LT978_16390 NONE
 LT978_16385 3339199 .. 3339216 - -11.3  -5.77734   AAACAAAAAGAAAAA             CCCCTTG AAAT CAAGGGG              TTTCGGCACTCTTTA 100 467
 LT978_16355 NONE
 LT978_16350 NONE
 LT978_16345 3334548 .. 3334564 -  -2.2  -2.87132   TTGCCTCCTGATATA              TCCAGT TGTTC ACTGGT              AAAATTTAATTAATG  41 47
 LT978_16340 3333945 .. 3333964 -  -2.2  -4.18488   ATCTACTTTAAGAAA            CTGAT-TGA TTT TCATACCAG            CACCGCCTGCCTTTC  54 17
 LT978_16335 NONE
 LT978_16330 3333466 .. 3333479 -  -3.1   -4.2679   TAATCTTTACCAAAA               GACCT TTTG AAGTC                CACTCTGCCAAGTGG  60 48
 LT978_16325 NONE
 LT978_16320 3332271 .. 3332287 -  -3.7  -2.63382   TTTTATATTGAGAAT              TTGACAT GTA ATGTCTA              TCAATCTCGTTAGAG  45 35
 LT978_16315 NONE
 LT978_16310 NONE
 LT978_16305 NONE
 LT978_16300 3329652 .. 3329662 -  -3.2  -2.66216   TGGCAGCAGGATAAC                 CGCT TTA AGCA                 CTGTGCATCAGCTCC  43 19
 LT978_16295 NONE
 LT978_16290 NONE
 LT978_16285 3328294 .. 3328317 -  -2.2  -2.85999   CCAGTTCATATCAGA          GCATCGGGGC TTCG GCTTCGGTGC           TTTTTTACGTTTTAC  41 37
 LT978_16280 NONE
 LT978_16275 NONE
 LT978_16270 NONE
 LT978_16265 NONE
 LT978_16260 NONE
 LT978_16255 NONE
 LT978_16250 NONE
 LT978_16245 NONE
 LT978_16240 NONE
 LT978_16235 NONE
 LT978_16230 NONE
 LT978_16225 NONE
 LT978_16220 NONE
 LT978_16215 NONE
 LT978_16210 3323041 .. 3323087 - -16.7  -5.63517   CGCTCAAATAAAAAA CGGACACCAATCAGAGCACAG TGATT CTGTGCAATGATCAGTGTCCG CAGGCTTTCCGTCTT 100 49
 LT978_16205 3322349 .. 3322378 -  -2.9   -5.4505   TTCTCCAATAAAAAA       GAGCCTATTCACGC TAA ACA-GAATAGGCTG       TGATCTGCTCTATTT  76 4
 LT978_16200 3322082 .. 3322103 - -10.2  -3.16191   CTATACTTGGAGCAA           GGGAGAAG CGCTAC CTTCTCCC            TCGGCTCAAAATCAT  76 37
 LT978_16195 3321586 .. 3321603 -    -7  -5.27779   CGTAAGACGAAAAAA             CACCCT TTTGAC AGGGTG              CTCATTTCCGCCTAT  91 27
 LT978_16190 3321260 .. 3321273 -  -8.1  -5.84432   GAGAACATAAAAAAA               CACCC CGAA GGGTG                TTCATCACATTAGCT 100 35
        terS NONE
 LT978_16180 NONE
 LT978_16175 NONE
 LT978_16170 NONE
 LT978_16165 NONE
 LT978_16160 NONE
 LT978_16155 NONE
 LT978_16150 NONE
 LT978_16145 NONE
 LT978_16140 NONE
 LT978_16135 NONE
 LT978_16130 NONE
 LT978_16125 NONE
 LT978_16120 NONE
 LT978_16115 NONE
 LT978_16110 3311827 .. 3311847 - -12.5   -5.0538   TTGTATGTTAAAAAA            GAGCCCGGG AAG CCCGGACCC            TATGATTCCTTTTCT 100 25
 LT978_16105 NONE
 LT978_16100 NONE
 LT978_16095 NONE
 LT978_16090 3305066 .. 3305077 -  -4.4  -3.09787   TGAAAGTATATAAAT                GTCA GCCA TGAC                 CGGACCTCCTTACAA  50 35
 LT978_16085 NONE
 LT978_16080 NONE
 LT978_16075 NONE
 LT978_16070 3301154 .. 3301173 -  -4.3  -5.48213   GAGGCAAAATAAAAA            CACCTAT TCAGTT ACAGGTG             CTGATTCACTATTAT  81 9
 LT978_16065 3300691 .. 3300711 - -10.4  -5.56264   TTGAAATATAAAAAA            GCAGCCGG GTTAA CCAGCTGC            CTGATCGTCTTTTTC 100 14
 LT978_16060 3299652 .. 3299672 -    -9  -4.09509   ATTAACTCATACAAA            GCCCCCTT AGAAA AAGGAGGC            AGCTTTGGATTACTT  79 35
 LT978_16055 NONE
 LT978_16050 3297390 .. 3297422 - -16.5  -5.75822   TAGAAATTAAAAAAA      GCCTCTCACAAATTC ATT GAACTTGTGAGAGAC      TTCGATATGGTGTTA 100 510
 LT978_16040 3294816 .. 3294863 -  -8.7  -2.66042   AATATGCATTATAAC GCTTTTCCCAAAAGTAAATCA AAACAG CGATTTACTTTTGGGAAGAAT TAATTATTCAAATTT  67 29
 LT978_16035 3293930 .. 3293951 -  -4.5  -4.39426   TATATCTTTAGAAAA           CAAGACTAT TATA ATACTCTTG            AACTGCATTTAAAAT  66 284
 LT978_16030 3292715 .. 3292751 -  -5.3  -5.19879   TTTTAAAGATAAAAA    GGTATCTTTATCAGT ACAGTAA ATTGATTAAGATACC    TTTATTGAAAAAATT  81 114
        gutB 3288872 .. 3288893 -  -6.6  -3.29325   TTTTGATAAGCAAGA           GGGAGAAT GCAAAG ATCCTCCC            CGTTCACTCAGCGAT  61 33
 LT978_16015 NONE
 LT978_16010 3286338 .. 3286380 - -13.7  -4.48299   TCAGACCTAAATAAA GAGGATGCTTCCCG-AAGTC CGAT GACTTTCAAGAAACATCCTC CATACTTTACAGTGA 100 32
 LT978_16005 NONE
 LT978_16000 NONE
 LT978_15995 NONE
 LT978_15990 NONE
 LT978_15985 3282135 .. 3282153 -  -8.1  -5.67967   ATCATGACAAAAAAA             GAGGCCC AAACA AGGCCTC             TTTTTCGTATATCGT 100 40
 LT978_15960 3276571 .. 3276590 -  -4.3  -4.98255   CGTCAATCAGAAAAA            GCAAGAA TCAGAG TCCTTGC             TTTTTAAGATGGTCT  73 44
 LT978_15955 3275471 .. 3275490 -   -10  -5.14563   TTGTTCATTAAAAAA            CACCCAGC GGGC GCTGAGTG             TTTTTTTCATGGTTG  93 32
 LT978_15930 NONE
 LT978_15925 NONE
 LT978_15920 NONE
        guaA 3265313 .. 3265358 - -14.3  -4.58685   AAACGGTTTCAAAAA GATGAAAAAAAACGCCTCTTT TTTA AAAGAGACGTTTTTTATCTTC ATTTATTCCCACTCA 100 28
 LT978_15910 NONE
 LT978_15905 3263272 .. 3263295 - -14.6  -3.45571   TAATTGACCAAAAAT          GGAAGACGGC AAGG GCCGCCTTCC           CGGCATCATTTTCCG 100 31
 LT978_15900 3261597 .. 3261614 -  -8.4  -5.98675   GACAAAAACAAAAAA             CCGGCT TTCCTC AGCCGG              TTTTTCCGTTATTTC 100 34
 LT978_15895 3260622 .. 3260634 -    -2  -3.41445   AAAAATTTGTAAACA                TTGT GAAAG ACAA                ATTTCGACTTATAAA  46 34
 LT978_15890 3260297 .. 3260316 -  -5.6  -6.34616   TCAAAAGAAAAAAAA            GCCCGCCC CGCA AGGCAGAC             TTTCAAGCTCTTATC 100 28
 LT978_15885 NONE
 LT978_15880 3259192 .. 3259235 - -12.5  -5.93809   TTTTCAGAAAAAAAA GCCCGGCTTATATTGCAAC TATGAG GAAGCAATACAAACCGGGC ATGGCGCGCGTATCG 100 253
        purE NONE
        purK NONE
        purB 3256214 .. 3256225 -  -7.2  -3.62224   ACAGCGGCTGAAGAA                GCCG CCTC CGGC                 TGGCTTCTTCTATAA  67 35
 LT978_15860 NONE
        purS NONE
        purQ NONE
        purL NONE
        purF 3250847 .. 3250868 -  -5.7  -4.40605   AGGCAGAAAGAGAAA           GGCAGCCTG AATT CCCGCTGCC            TTTATGTCATTTTCA  69 45
        purM 3249766 .. 3249776 -  -2.4  -3.44848   CTTTTTCATGAAAGA                 GCCG CAC CGCC                 GAAAGAAATGCCTTC  46 5
        purN NONE
        purH NONE
        purD 3246322 .. 3246343 - -12.3  -4.79352   TCATTCAGAAGAAAA           CCCGCATCT TTTA AGACGCGGG            GGTTTCCTCTTTATC 100 36
 LT978_15810 NONE
 LT978_15805 NONE
 LT978_15800 3242730 .. 3242754 - -13.6  -5.64274   GCACGCATAAAAAAA         CCGC-CTGCCG TCAT CGGCAGAGCGG          TTTTTTACGTAGCTG 100 30
 LT978_15790 NONE
        pcrA NONE
        ligA NONE
 LT978_15775 3234709 .. 3234736 - -10.7  -5.22312   ATTCACACTAAAAAA        CCCTTGCTCAT ACAGAA ATGAACAAGGG         CATCTTGGTTAATCG 100 34
 LT978_15770 3233479 .. 3233501 - -11.3    -5.626   TACGTTATAAAAAAA          CGCCGGGCTG GATT CAGCC-GGCG           TTTTTTTATATTTAT 100 37
        gatC 3230452 .. 3230462 -  -5.4  -2.99704   TTGTGATCAAATAAT                 GACA TAC TGTC                 TCCCTCCTTTAATCC  53 34
        gatA NONE
        gatB 3227498 .. 3227519 - -12.3    -5.626   CAGCTTATAAAAAAA           GAGACCGGC GCTT ACCGGTCTC            CGTGTCAGCAGCGCC 100 61
 LT978_15735 3223335 .. 3223364 -   -15  -5.55769   TGCCAGAAGAAAAAA       GGCCCCGGCTCC GTTTAA GGAGCCAAGGCC        CGCTGTCTTACTCTT 100 33
 LT978_15730 3222263 .. 3222301 - -16.4  -2.79004   TCACGCTGAAAAGAT   GACAAAATCCTAAAAC GAATACT GTTTTAGGATTTTGTC   CGCGTATTAGTCATC 100 32
        rlmD 3220707 .. 3220717 -  -2.6  -4.09963   TGTTAATAACAAGAA                 TATA GAT TATA                 AAAACAAAATTTGTT  55 92
 LT978_15720 NONE
 LT978_15715 3215593 .. 3215619 -  -6.7  -5.03747   AAATTTTTTAAAAAA         GAAGTAACC ATTAGATTA GGTTACTTC         TCACAAAATAGAGTA  83 92
 LT978_15710 3214439 .. 3214476 -    -3  -4.19953   TATTTAATCTTAAAA   TCCATAAATTTCTATGA TTTCT TCATA-AAACATATGGA   AAATAGGTATTGGTT  55 90
 LT978_15680 3209258 .. 3209282 - -10.7  -5.54338   TAAGCAAAATAAAAA          GGCCGGAAC TTATGCC GTCCCGGCC          TTTTTGTCTTTATTC 100 35
      ant(6) 3207722 .. 3207738 -  -8.7  -5.92399   TAAGAAAATAAAAAA              GCCCGTT AAA AACGGAC              TCAATGCAGCTCATC 100 61
 LT978_15665 NONE
 LT978_15660 NONE
       cotJC 3206538 .. 3206559 -  -6.5  -5.75822   CAGAAAGGAAAAAAA           CAGCCGTCA TGTT TGAGGGCCG            TTTAAAAAATTTTCT 100 27
 LT978_15650 NONE
 LT978_15645 3205598 .. 3205613 - -10.4  -5.80248   CAATACACAAAAAAA              CGCAGC CGAG GCTGCG               TTTTTTTCACTTCTG 100 42
 LT978_15640 3204798 .. 3204822 -  -9.4  -4.78157   ACGAAAAATAATAAA         GAGCATTTGCC CCAG GGCAA-TGCTC          TTTTTATTTTTTCTC  90 29
 LT978_15625 3202962 .. 3202985 - -10.2  -5.60993   CCGCTGACAAAAAAA          GCGCCCCGCC TCTG GACGGAGCAC           CTTTTTTCTATGCTT 100 33
 LT978_15620 3202458 .. 3202484 -  -2.2  -3.53012   CGGCTCTCCCGGAAA         GGAACAGTTGAA TGC TTCATATGTACC         GCCTCCTGTCATTGG  46 48
 LT978_15615 NONE
 LT978_15610 3201405 .. 3201427 - -14.8   -5.1764   GACAGAACATAAAAA           GGCGCCCTTC TTA GCAGGGCGCC           TTTTTCGCGCGATTA 100 38
 LT978_15600 3199587 .. 3199608 -  -5.9  -4.47873   ACAAGACTGACAAAA           GTCCAGA CGCCATGT TCTGGAC            TTTCTGTATTTAATA  72 35
 LT978_15590 3195129 .. 3195148 -   -10  -5.47218   GGTGATGTAAAAAAA            GGACCGGA GTCA TCCAGTCC             TTTTCATCACATCGC 100 41
 LT978_15585 3192775 .. 3192801 - -17.4  -6.06529   GATACACAAAAAAAA         GAGCCTCACGGA AAT TCCGTAAGGCTC         TTTCTATTATTTATT 100 32
 LT978_15580 NONE
 LT978_15575 NONE
 LT978_15570 NONE
 LT978_15565 NONE
 LT978_15560 3187752 .. 3187772 - -12.6  -5.64274   GCATTCATAAAAAAA            TCCCTGCC GAAAA GGCAGGGA            TTTTATGTTTCAACC 100 28
 LT978_15545 NONE
 LT978_15540 3182418 .. 3182433 -  -6.8  -5.80951   AGGGAAAACAAAAAA              GGAGCC CGTA AGCTCC               CTTTTTTTTTATGAT 100 34
 LT978_15535 3181376 .. 3181402 - -12.3  -5.52909   TAACATCGAAAAAAA         GAGCTGCCCCC GTATG AAGGGCAGCTC         CTTTTTGATTACGCT 100 34
 LT978_15525 3178196 .. 3178250 - -19.6  -3.02829   GACATCTGTGTAAGA TAAAAAAAGCCGGTATGACCCGCCG TCTTCT CGG-GGGCCGTACCGGCTTTTCTTA ATTCTCAAGTTCTTC 100 23
 LT978_15520 3177607 .. 3177622 -  -7.6   -4.7261   ATCCATTAAAAGAAA              CGCTAT ATCC ATAGCG               TTTACAGCAAAATCA  84 38
 LT978_15515 3176353 .. 3176378 - -15.5  -5.19879   CTGTAAACACAAAAA         GGAACTCCCGC CCGT GCGGAAGTTCC          TTTTTTTCTTAATGT 100 34
 LT978_15505 3173461 .. 3173479 -  -8.1  -5.88565   TTTACAATAAAAAAA             GAAGGGC TTCCC GCCCTCC             GTTTCTTATTTCTCA 100 31
 LT978_15500 3172929 .. 3172947 -  -7.4  -5.55664   TGATGATGAAAAAAA             GGAGGG CTTTGTC CCCTCC             TTTTCTGCTTTTTCG  93 43
 LT978_15485 3170838 .. 3170864 - -11.6  -5.49809   GAAACCGCAAAAAAA         TCCCAAGGGACC GAA AACCCCTTGGGA         TCTGTTCAGCTTACG 100 36
 LT978_15480 3169411 .. 3169434 - -12.6  -5.26875   TTGTTAATTAAAAAA          CACAAAGGAA TATT TTCCTTTGTG           CTTCTTGTTTATTAT 100 37
 LT978_15475 3167858 .. 3167875 - -11.3  -6.04953   ACAGAAATAAAAAAA             GGCAGAC CTGA GTCTGCC              TTTTTTCTTCTACCA 100 35
 LT978_15470 3167051 .. 3167070 -  -3.6  -5.67283   AACCTAAATAAAAAA            GGTGAT TTCTTTTC ATCACC             TTAATCCGATCCTTG  89 26
 LT978_15455 3159237 .. 3159261 -  -6.5  -5.71712   TTTTAGAGAAAAAAA          GACCTAACT GTGCATA AGTCAGGTC          TTTCATCTTTAAAAT 100 59
 LT978_15450 3155880 .. 3155897 -  -9.9  -5.48787   ATAACACATAAAAAA             GACTGAC CGAA GTCAGTC              TGCAATCTATCAGGA 100 35
 LT978_15445 NONE
 LT978_15440 NONE
 LT978_15435 3152443 .. 3152466 - -16.8  -4.62475   ATTTATAAATCAAAA          GCCTTCCGCA AATA TGCGGAAGGC           TTATTTTTCGCTGCT 100 26
 LT978_15430 NONE
 LT978_15425 3150107 .. 3150127 -  -9.7  -5.52023   ACTACGAAGAAAAAA            CACCTGTGA TTT TCGCAGGTG            TTTTACAAAACGGAA 100 28
        nosA 3148756 .. 3148767 -  -5.8  -5.00616   CGGCTGGGTAAAAAA                CCGT GATG ACGG                 CCGGGTGGAAATCCT  81 173
 LT978_15410 3147891 .. 3147914 - -13.9  -2.98778   GCATAACGTAAATCA          GCCGTGCTG TCAGTG CAGCACGGC           TTTTTTTCTATACAT  95 33
        nagE 3144637 .. 3144660 - -15.4  -5.76949   TATGCTCAAAAAAAA          TCCGGATCAC ATAG GTGATCCGGA           TTTTTCAAGTCTGCT 100 30
 LT978_15380 3144056 .. 3144089 - -14.1  -4.78157   ATCAAAAAGAATAAA     CAAAAGCCAGATCAT TGAT ATGATCTGGCTTTTT      TATGTTCAGCTCCCG 100 31
 LT978_15370 3141172 .. 3141200 -  -3.1  -5.60993   CTCCTTACAAAAAAA        CACCCTGACTTAT GAT ATTTATCAGGATG        AACAGCACACATTTG  85 319
        treP 3138799 .. 3138823 -  -5.7  -4.37198   AATGGAAAGGGAAAA         GGGACAGCCT GTTAGA AGGC-GCCCC          GCAGGTTTTCTATTT  69 35
        treC NONE
        treR 3136309 .. 3136328 -  -9.2  -5.65177   ATACTGACAAAAAAA            CGGGCTGC CGCG GCAGTCCG             TTTTTATTTTTCTCT 100 29
 LT978_15335 3135492 .. 3135530 - -12.5  -4.67692   GCAAAACCAAATAAA   CATTAAAAGCTGCCGGG ACACG CCCGGCAGCTTTTTTTA   TCTTATACCCACTTT 100 28
 LT978_15315 3128326 .. 3128351 -   -14  -5.61596   ATCTTCACAAAAAAA         GCGGAACGCC TGATAC GGCGCTCCGC          TTTTATATTACGCAA 100 33
 LT978_15285 NONE
 LT978_15280 NONE
 LT978_15275 3121688 .. 3121711 - -11.7  -5.36441   CGGCCACATAAAAAA          GCCGCCTGA TCTGAG CCAGGCGGC           TTCTTTCTAGTGGTA 100 183
         cax NONE
 LT978_15260 3118393 .. 3118416 - -11.1  -5.43414   ATCACACACAAAAAA          GCTGATTCC CGAACC GGAATCAGC           TTTTTTTATTTATCT 100 35
 LT978_15245 3116086 .. 3116103 - -14.1  -5.63236   ATGGAAAAAGAAAAA             CCCCGGC ATCC GCCGGGG              GTTATTCCCAATCCT 100 27
        pdaA 3115184 .. 3115208 - -11.5  -5.02606   TATCAAATAACAAAA          CACCTCTCC ATTACCA GGAGAGGTG          TTTTCTACAGGCGCG 100 30
 LT978_15220 3111612 .. 3111622 -  -2.4  -3.35832   AAAGTTTCCAAAAAT                 CCTC AAA GCGG                 TTTTTCATTCAATAC  45 30
        rlmD 3110026 .. 3110038 -  -2.6  -5.60993   CTGCGCATAAAAAAA                CCCG GAAAT CGGA                AATGTTTATACCGAA  80 69
 LT978_15210 3108974 .. 3109001 -  -3.4  -4.89562   CCAAAACCAATAAAA        TAGACTGCTG-AC TAA GTGCCGCAGTCTT        CATTCATAAGATTAA  69 80
 LT978_15205 3107210 .. 3107238 - -15.3   -4.9725   AGCTGCACACAAAAA        GGCCCGGAATTCA AAC CGAAATCCGGGCC        GGATGATGAGTTGTT 100 45
 LT978_15200 3106517 .. 3106535 -  -6.6  -5.37043   ATGGCATACAAAAAA             GACCGGGC ATC ACCCTGTC             TTTGACAATGATCGA  89 112
        acoA NONE
        acoB 3104323 .. 3104337 -  -4.2  -2.52464   CCCTCCTTTAATTCA               TTGCCG GCT CGCCAA               GCAATTCAAGCGTGA  47 3
 LT978_15185 NONE
        lpdA 3101681 .. 3101706 - -12.7   -4.8622   GCTTTCAACGAAAAA         TACCCCTTCTC ATCT GAGAAAGGGTA          TTCCGGTTATACGGA 100 32
 LT978_15175 NONE
 LT978_15170 3099523 .. 3099544 - -12.3  -4.76041   CACAGGTACGAAAAA           GGCCTGCTG TCAT CAGCAGACC            CCTTCTCAAAAATGC 100 31
        glvA 3097970 .. 3098023 -  -6.5  -4.62783   GACTCATCCCAAAAA TCC-CCCCGTTTTCT-T-TCTATTAT ATAGA ATAACAGATAAAGAAAACGGGGAAGA TTGTCATCAGGAAAT  77 32
 LT978_15160 NONE
 LT978_15155 3095569 .. 3095588 -  -9.3  -4.98672   GCGAAAAAGATAAAA            CCTTCCC GGGGAG GGGAAGG             TTTTGACCTTATTGA  91 34
 LT978_15150 NONE
 LT978_15145 3091893 .. 3091916 - -11.8  -5.75342   TCTTCGCAAAAAAAA          GACCTCCG-CA CTC TGTCGGAGGTC          TTTTTCCCTACCTAT 100 37
 LT978_15140 NONE
 LT978_15135 3090451 .. 3090474 - -13.9  -5.69262   TTAGAAAAATAAAAA          CCCTTGCCG GTTAGA CGGCAAGGG           TTGTTTCTTACAGTG 100 33
        cyoE 3089126 .. 3089155 -  -2.1  -5.06089   AAAGCATAAACAAAA      CGGGGCGGCTCTG TATCTG CAG-GCCGCCT-G       TTTACGTTCTGAGAA  69 27
 LT978_15120 NONE
 LT978_15115 3086629 .. 3086646 -  -9.8  -4.72986   GACCCGTATCAAAAA             GGCGGC CGAAGC GCCGCC              TTTTTTTCAGACTGT  91 32
 LT978_15110 NONE
 LT978_15105 NONE
        bstA 3082877 .. 3082894 -    -7  -4.83269   AGAGGACATCAAAAA             CCGCTT AACGAA AAGCGG              CATTCCCGCTGATCA  83 253
        mprF 3078232 .. 3078250 -  -8.8  -5.75945   ATTCTTCAAAAAAAA             GACGCCTT TTA ACGGCGTC             TTTTTTTGGTTTTTC 100 15
 LT978_15080 NONE
 LT978_15075 3076570 .. 3076595 - -15.5  -3.92324   CCCGCTAATACGAAA         TCCCCGCCTCT GTAT AGAGACGGGGA          TTTTTTTACAACTCG 100 31
        recX NONE
 LT978_15050 3074006 .. 3074023 - -12.7  -5.45802   GCCCGAAAAGAAAAA             GAGGCCG GAAC CGGCCTC              TTTTGTTATTATTTT 100 34
 LT978_15045 3072658 .. 3072685 -   -15  -5.18561   GAAACACTGAAAAAA        GCTTGCAGGCGGA ATA TCC-CCTGCAAGC        TTTTTGTTATCCTTT 100 32
 LT978_15025 3070665 .. 3070685 - -14.7  -5.98675   TATAAAAAGAAAAAA            CCGCCGGAC GGT ATCCGGCGG            GCGCACTGCTATATT 100 39
 LT978_15020 3070014 .. 3070031 -  -6.2  -5.60993   GGTTTCAGAAAAAAA             GCAGGC TTATTC GCCCGC              CTGAATCTTTACTTT  89 34
 LT978_15015 NONE
 LT978_15010 3068740 .. 3068770 -    -4  -6.00086   ATATGAGAAAAAAAA       GAAAAAGTCTGTAC GCG GGACAGACTTTATT       GCTGAAGGTATTCAT 100 21
 LT978_15005 3067544 .. 3067562 -    -3  -2.68823   TTTTTTTCATACAAC             GTCCCCAG ACC CTGCGCAC             AGCGGCGGCTGTTTA  41 38
 LT978_15000 3064941 .. 3064965 - -11.4  -4.47686   GCAGAAAAAATTAAA          GCTCGGCTCT GTTTA AGAGCCGGGC          TTTTTTTGTCTTCTC 100 13
        mutY 3062581 .. 3062593 -  -6.9  -3.30969   ATTCAGGAAATCGAA                GCCCG CGG CGGAC                TGAAACGGAATGAAG  59 85
        fabL 3061595 .. 3061609 -  -3.5   -2.6999   TTAAAACTTATACGA               GCAGA GAGCG TCCGC               CGTCAATAATGATGG  43 3
 LT978_14975 3061309 .. 3061333 -    -8  -5.49569   TAGCAACAGAAAAAA         GCACTTCCATC CGAA GATG-AAGTGC          TTTTTCGTTTCAGTG 100 42
 LT978_14970 3060895 .. 3060920 -  -7.5  -5.24291   AAAATGAAAATAAAA         GAACCACTCCG CTTC CGGAATGGCAC          ATTCATTTCTGCACA 100 28
 LT978_14965 3060221 .. 3060240 -  -8.6  -4.62336   AGCCCATGTGAAAAA            CCTGTTGA CACC CCAACAGG             TTTTTTATTGTATTC  86 42
 LT978_14960 3058396 .. 3058423 - -15.6  -5.47218   TTGCATTCAAAAAAA        CGTATGCCGACC ATTC GGACGGCATACG         TTTTTGTATCAGTTC 100 34
         bcp NONE
        perR 3054558 .. 3054597 - -19.6  -4.24338   AAAAACAGTGTAAAA  TAAACGAAGCTGACCG TATCAAAG CGGTCAGCTTCGTTTA   GTGGTTTTCTTTTTT 100 23
 LT978_14930 3052892 .. 3052908 -  -2.3   -3.8709   AAACTCTCCGATAAA              GTAGT TTGACTG ACTAC              GCACATCGCTGTGCG  50 237
 LT978_14925 3051119 .. 3051129 -  -5.4  -4.42235   AACCGTTAAAAAGAA                 TCAC TAC GTGA                 TATCTTGCATTACTA  69 237
 LT978_14920 3048123 .. 3048142 -  -2.2  -3.88001   TTTCAGAAAAAGCAA            GAGTTTTT TTGA AAAAATTC             TCTCAAAACTAGATA  52 61
         rrf NONE
 LT978_14910 NONE
 LT978_14905 3047793 .. 3047805 -  -3.3  -3.25942   AGTGGCGGAGAGCAA                GGGAT TCG AACCC                TTGAGACGGGGTTAC  48 0
 LT978_14900 NONE
 LT978_14895 NONE
 LT978_14890 NONE
 LT978_14885 NONE
 LT978_14880 NONE
 LT978_14875 NONE
 LT978_14870 NONE
 LT978_14865 NONE
 LT978_14860 NONE
 LT978_14855 3046888 .. 3046902 -  -2.1  -2.89655   GTTTTCAAAAAAATG               CAACT GGGCT AGCTG               GATTCGAACCAACGC  42 11
 LT978_14850 NONE
 LT978_14845 NONE
 LT978_14840 3046502 .. 3046524 -  -4.1  -5.74122   TATTATATAAAAAAA           GCGACCTGC AATAA GCAAATCAC           TCTCATATATGTTTT  89 91
 LT978_14835 3046233 .. 3046255 -   -15  -5.60689   TTATACAACAAAAAA           GGCTTCTACA ATA TGTAGAAGCC           TTTGTATACCGGTGG 100 32
 LT978_14830 NONE
 LT978_14825 3044588 .. 3044609 - -11.6  -5.67967   ACCAGCACAAAAAAA           CCGGGTTC AAAGAA GAACCCGG            TTTTGCAGTCAGAAA 100 226
        thiC 3042720 .. 3042748 - -14.8  -5.00616   CGTTTTTCTAAAAAA        GATGAAGATGGA CACAC TCCATCTTCATC        TTTTCTTTTATTGAT 100 33
 LT978_14810 NONE
 LT978_14805 3039159 .. 3039194 -  -9.8  -3.53012   TCCTTTCCGCTGAAA    GGGCAAAATCCCC-AGG ATG CATCGGGTATTTTGCCC    AACCGTTCTATTGAA  79 33
 LT978_14800 NONE
 LT978_14795 NONE
 LT978_14790 NONE
 LT978_14785 3035247 .. 3035286 - -17.5  -4.25256   CCGTCACCAAAATAA  CATCAAAAAACCTGCCGG TCTGC CCGGCAGGTTTTTT-ATG  TTCATTATCAATAAA 100 57
 LT978_14775 3032431 .. 3032466 -   -17  -5.63236   ATCGAAAAACAAAAA    GGCTCCCATCTCCG ATTGCTTG CAGAGATGGGAGCC     TTCGGCGGTCCGATC 100 168
 LT978_14770 NONE
 LT978_14765 NONE
 LT978_14760 NONE
        ssuD 3028528 .. 3028545 - -12.7  -4.59853   CTAAGCGCTTAAAAA             GGCGGGT GAAT ACCCGCC              TTCACTGCCGGCATT 100 99
        rpsN 3028142 .. 3028165 -  -8.1  -4.64598   TAAGCACGGCAAAAA          CTCCGGTTC ATGACA GATCCGGAG           TTTTTACATTACCAG  86 34
 LT978_14735 3027173 .. 3027209 - -10.3  -5.71712   TTTCACATAAAAAAA    CGCAATACTTCGTTTAT CAG AGAAACGAAACACTGCG    TTAATAACGTATGTA 100 40
        queG 3025227 .. 3025247 -  -6.1  -5.72622   TTTATAAAGAAAAAA            CACTTGAAC TCC GGCCAAGTG            CTTTTTCTCTATACA 100 45
 LT978_14720 NONE
        trmL 3023737 .. 3023752 - -11.8   -5.8187   TATTCAATAAAAAAA              CGCCCG GATG CGGGCG               TTTTTTCTCACGTCA 100 33
 LT978_14710 NONE
 LT978_14705 NONE
 LT978_14700 3021508 .. 3021546 - -11.9  -4.43397   CCTGAAAACAAATAA  CGGCAAAAGGGTGCTCTT AATG AAGAGCACCCTTTC-CTG   TACAACATAACAATG 100 43
        prkA 3019270 .. 3019289 -  -7.1  -4.45187   AAACAGACAAAAGAA            CCCGTCC TTTTAC AGACGGG             CCTCTCAATGAAATC  78 46
        yhbH 3017894 .. 3017933 - -19.4  -5.15969   TTTTAATTTAAAAAA  GCCGGGTGAAGAACCGCG GCCG CACGATTCTTCACTCGGC   TTTATATTTAATACG 100 33
 LT978_14685 NONE
 LT978_14680 NONE
 LT978_14675 NONE
 LT978_14670 NONE
 LT978_14665 3013975 .. 3014002 - -12.1   -5.7946   TCTTCAATAAAAAAA        GACAAATCCGC TCTTAC GCGGATTTGCC         TTTTCAATTACTTCT 100 33
 LT978_14660 NONE
 LT978_14655 NONE
 LT978_14650 NONE
 LT978_14645 NONE
 LT978_14640 3010147 .. 3010170 -   -14  -4.68645   CATCTAAAACGAAAA          GCTGTTTTGC AAAG GCAAAACAGC           TTTTTTATATCAGGT 100 35
 LT978_14630 3008655 .. 3008682 -  -5.6  -5.82316   AGCACTGAAAAAAAA        GAATGATCGCCC GAAG AGGAAATCATTC         TTTCTTTTCAGTGAG  95 20
 LT978_14620 3005982 .. 3006007 -  -9.9  -5.42514   TTAGAAACGAAAAAA         TCCTTCATTCGT TCA ACGA-TGAAGGA         TTTTTCGTTTTAGCG 100 56
 LT978_14610 3004778 .. 3004794 -  -9.4   -5.8901   AGATAAAATAAAAAA              GCCGCA GCAAA TGCGGC              TTTTCCATTCATTTA 100 38
 LT978_14605 3003435 .. 3003447 -  -3.3   -4.4009   GTCTACGGTATAAAA                CCGAC TCA GCCGA                AAAAACCGAATCAAT  63 320
 LT978_14595 NONE
 LT978_14590 2999746 .. 2999778 -  -6.3  -3.52204   CCATTTTCAAATCAA     CGGCGAACA-AGCG AAAGTG CGCCACGTTCACCG      TCTTGACCGTGACAC  61 524
 LT978_14580 2998839 .. 2998856 -    -7  -5.32565   CAAGGAAGCAAAAAA             GAGCCT GTCAAA AGGCTC              TTTATACCCGTCAGA  91 36
 LT978_14575 2998282 .. 2998303 - -10.9  -3.96216   TTCTCACGGAAAGAA           GAGCCTGCA TGAG TGCAAGCTC            TCTTCATCCGTTACT  86 36
 LT978_14570 NONE
 LT978_14565 2995938 .. 2995958 -  -7.5  -5.60993   GTTTTTATAAAAAAA            CCCGCCC TTAAGCG GAGCGGG            CGTTTTTTTATTTCA 100 33
 LT978_14560 NONE
 LT978_14555 2993665 .. 2993716 -  -3.3  -5.62045   ATAGAGAATAAAAAA CCCACAACAAACCGCTTTACG CTTTATTGCTTC CGTAAAG-AGCT-GTTGTGGG TCTCCGGGTCTCCAT  81 88
 LT978_14550 NONE
        glpK 2991168 .. 2991216 - -16.4   -4.9792   CACGGTATAGAAAAA GAGACCACAACAGCCAAAGCGCAT GTC AT-CACTTTGG-TGCTGTGGTCTC TCCTCATCTCAGGAC 100 81
        glpD 2989429 .. 2989460 -  -9.5  -4.98672   TGTAAAAAGATAAAA      GAAGGGCTCATGCC TTTTC GGCAC-AGCCCTCC      GGTTATTATTGTTCG  91 31
 LT978_14535 2987553 .. 2987575 - -14.8  -5.61596   AGGCGTATAAAAAAA           CCGCCGGATG TCG CTTCCGGCGG           TTTGTTGTTTATTTC 100 34
 LT978_14530 2986307 .. 2986317 -  -3.2   -2.5001   ACAATTTTCATCAAT                 CAGA CCT CCTG                 TCCCGAAACGGAAGC  43 10
 LT978_14525 NONE
 LT978_14520 2985123 .. 2985149 - -15.2  -4.53303   CATGCTGACATAAAA         CAATCCCGGCGT CAG ACGCCGGGATTT         CTTGTGTTTGTGAAC 100 10
 LT978_14510 2984331 .. 2984358 -  -9.8  -3.34962   TCTGATATCTGATAA        GCTGTACGGCCT CATA AGGCTGTGCAGC         TTTTTTACAGTCTGA  78 30
 LT978_14490 2978984 .. 2979035 -   -19  -3.37487   TCACATCCTGAAACA CGGAAAATAAAAAAGGATGCGGGG ATTT CCCCGCATCCTTTCTTCTTTTACA GATATCTCCGGTGCA 100 21
 LT978_14480 2976301 .. 2976318 - -11.3  -5.63517   CGTCTAAATAAAAAA             CCCGTTC GGAT GAACGGG              TTTCTCTCACTGCTA 100 38
 LT978_14470 2974133 .. 2974147 -    -7  -2.86728   ATTACTGAGACGATA               CCACGC AGT GCGGGG               AGTTAAACGGACAAA  60 52
 LT978_14465 2973187 .. 2973211 - -12.9  -5.38326   GTAATCAAATAAAAA          TCCCGCCCTTT TTA AAAGCGCGGGA          TAAAACTTGCGTATT 100 39
 LT978_14460 2971471 .. 2971490 -   -15  -5.61881   TCCGAAAAATAAAAA            GGAGCGGC GGGT GCCGCTCC             TTACAAATCCCCGTT 100 26
 LT978_14455 2969995 .. 2970015 -  -9.7  -5.19879   TTTTAAACATAAAAA            CAGGCCC TTTTACG GGGCCTG            TTTTTTTAAAATGAA 100 31
 LT978_14435 2967274 .. 2967301 -   -15  -5.59534   AAGCATAACAAAAAA        GCTTGCGCGTCTG ATA CAGACG-GCAAGC        TTTTTTTCATTTACA 100 36
 LT978_14420 NONE
 LT978_14415 2962780 .. 2962800 - -11.2  -5.00895   TTCATCATATAAAAA            CAGCCTTC AAAAA GAAGGCTG            CCGTTATCTGCTTCG  93 29
 LT978_14410 2961178 .. 2961202 -  -7.2  -5.47821   ATCCATTTAAAAAAA          CCTTGAGC TTATTTTTC GCTCAAGG          TTGCGTTATGAAGCA  91 9
 LT978_14390 2959356 .. 2959380 -  -7.1  -4.60041   AGGCAGCCTGAAAAA          CCCCGGC ATCAGAGCACA GCCGGGG          TTTTCACACATTCGT  79 74
 LT978_14385 2958139 .. 2958162 -    -6  -5.20216   CATATCATGAAAAAA          GAACGGCGCCT GTT ATGC-CCGTTC          TTTTTCTCCGGAATG  84 14
 LT978_14380 2957320 .. 2957358 - -13.4  -3.14211   ATTCCCGTCCATGAA   TAAGAAAAGCCGGATC TGTATAG GATCCGGCTTTTTTTA   TGTCGCGGCGCTGAT  95 23
         dat 2955336 .. 2955354 - -11.7  -4.88407   TGACTGAAGCAAAAA             GGCCGGA TGTGT TCCGGCC             TTTTTTTCAGCTTAT 100 37
 LT978_14360 2954054 .. 2954073 -  -7.9  -3.53343   AATTCTTTCTGTAAA            GCAGCTT AATCAA AAGCTGC             TTTTTTTACAGCTCC  68 31
 LT978_14350 NONE
 LT978_14345 2949315 .. 2949336 - -10.9  -5.28481   TACTGAATGAAAAAA           GGGCGAATC TTTT GATTCACCC            TTTCCGATTACACCG 100 33
 LT978_14310 NONE
 LT978_14305 2943421 .. 2943445 - -12.9   -5.7946   TGTTGAATAAAAAAA          CCCCTCCATTT CAT AGATGGAGGGG          TGTGGAGCTTATTGC 100 34
 LT978_14295 2940991 .. 2941019 - -12.5  -4.77157   TCAATCCACGAAAAA       GCCGCAGAC-CG GCGTTT CGCGTCTGCGGC        TCTTGATTACGGCCG 100 32
 LT978_14290 2939381 .. 2939401 -  -9.7  -5.88197   TTAAACATAAAAAAA            CGGCACG CTGATTC CGTGCCG            TTTTTGATATTATAA 100 35
 LT978_14285 2938000 .. 2938022 -   -15   -6.2845   AATCATAAAAAAAAA           CTGACCTCTT CAT AAGAGGTCAG           TTTTTTTGAGCGGGA 100 22
 LT978_14265 2934883 .. 2934933 - -12.8  -2.71924   CACCGCTTGGTAAAT GAAGCCGGAAAGCTGATTTTAT TCCACAG ATAACAGAAGCTTTCCGGCTTC TGTATTTTACCGGTT  89 32
 LT978_14255 NONE
 LT978_14250 2932449 .. 2932469 -   -14  -6.09196   TGTAAAATAAAAAAA            CAGCCCGG CTGTT CCGGGCTG            TTTCATTTATTTTTT 100 32
 LT978_14245 NONE
 LT978_14240 2928227 .. 2928239 -  -2.7  -2.83249   TCTTACATAATACCA                GTATA GCA CATAC                CTCTTTTTTGAAAAT  42 49
        yhaM 2927215 .. 2927236 -  -4.4  -5.15969   GCTGAACGTAAAAAA           GACCGATC ATAGAG AATCGGCC            TTTTTATCTTATTGA  75 34
 LT978_14230 2926870 .. 2926897 - -12.1  -6.23545   TCTAAATAAAAAAAA        CTGTGCGGGCTC TCAGC GAGCC-GCACAG        TTTTTTTATGCGATG 100 31
       yhzE1 2925734 .. 2925760 -   -16  -4.63218   GCCCGGGTAAGAAAA         CGGACCGCTTTT AGA AAAAGCGATCCG         TTTCGCTTAACAAAT 100 32
       yhzE2 2925513 .. 2925547 - -19.4  -5.54264   AAACAGGCAAAAAAA     TATGGCTGACGGAGGT CTG ACCCCCGACAGCCATA     TTTTTTTCTTAATAA 100 34
 LT978_14200 2923919 .. 2923929 -  -6.8  -3.53343   AACGCGGTGTTTAAA                 GGCT CAC AGCC                 GATCTACCACTTATT  61 233
 LT978_14185 2922640 .. 2922659 - -12.2  -3.71645   AACCGCATACCGAAA            CCTCTTCC GGCC GGAAGAGG             TTTTTTAATGTGTTT  90 50
        ecsA NONE
 LT978_14160 NONE
 LT978_14155 2917123 .. 2917147 - -16.5  -6.02914   CTGACATAAAAAAAA          CAGCCGGTACA TTA CGTACCGGCTG          TTGTAATTCTTAAAT 100 12
 LT978_14135 NONE
        hemE NONE
        hemH NONE
        hemY 2907923 .. 2907945 - -10.6   -5.1615   GGAACATGCAAAAAA           CCTCCGTTTT ACG ATAACGGAGG           CTGGTACGTTTCAAA  93 11
 LT978_14115 2907196 .. 2907230 -  -9.5  -4.66609   CACGGCACCTAAAAA     GTGAAGGATCATCTA TTATT TAGATAATCCTTGAC     CAACATACATTTCCA  88 6
 LT978_14110 2904759 .. 2904807 - -23.6  -2.85354   GATTTTAATCGAAAT CA-AAAAAAAAGAGGCGCTGAGC ATCT GCTCAGCGCCTCTTTTTCTTATG CTGTTATTTCTTCTT 100 21
 LT978_14095 2902200 .. 2902237 - -17.9  -3.08224   ATCTCAGGTTAAAAT   GAAAACCCTGCACGGAA TGAT TTCCGCGCAGGGTTTTT    TATGCCATCGGCGAT 100 25
 LT978_14080 2899635 .. 2899645 -  -2.4  -2.77135   GTCGATAAATAACAT                 GGTG CTC CTCC                 TTTATTTCTCCCACT  41 27
        lplJ NONE
 LT978_14070 2897873 .. 2897898 -  -7.6  -5.20633   AAAAATATAGAAAAA         CACTCAAGGGC AAAAA GCCC-CGAGTG         CCGTAAAACCGGAAA 100 41
 LT978_14065 2896212 .. 2896230 - -14.6  -4.21908   GATCAGCATGTAAAA             GCGAAGCC CCC GGCTTCGC             TTTTCGTCCGTCATT 100 36
 LT978_14055 2894360 .. 2894384 -  -9.2  -5.63645   GTAAAACATAAAAAA         CCGGCGTCGGC CATG GCCC-CGCCGG          TTTTTTTATTATTTT 100 34
 LT978_14045 2891825 .. 2891845 -  -6.8  -5.24416   GAATCATAACAAAAA            GGCCCGAA TTAGT TTTGGGCC            TTTTTGGCGAGCATT  88 13
 LT978_14010 2884027 .. 2884046 - -12.2  -3.73904   AAACAGAGTGAATAA            GCCAATCC ATAT GGATTGGC             TTTTTTTACATTATC  90 36
 LT978_14000 2882852 .. 2882873 - -12.3  -4.81851   ATGTAAATCGAAAAA           GCCCTTCCC AAAA GGAAAGGGC            CCGTCCCTTCACATC 100 51
 LT978_13995 NONE
 LT978_13990 2881950 .. 2881967 -  -5.5   -5.7946   CGTTTAATAAAAAAA             CAGCCCT CCTC AGGGTTG              TTTTTTTAACATTTC  95 46
 LT978_13980 2880651 .. 2880672 - -13.1  -5.47821   ATCCATTTAAAAAAA           CAAGCCTCT TTAA AGAGGCTTG            TTTTTTTATTTCTCA 100 31
 LT978_13955 NONE
        lepB 2876842 .. 2876861 -  -6.4  -5.41143   CATTTCCGAAAAAAA            GACGCC GTTCACTT GGCGTC             TGATTCACTGATGAC  89 14
 LT978_13945 NONE
 LT978_13940 2874590 .. 2874607 -  -9.9  -5.80364   ATCCGAATAAAAAAA             CACGCAT CCAT ATGCGTG              TTTTTTATTTGAACA 100 30
        addB NONE
        addA 2862484 .. 2862496 -  -4.8  -4.18494   CAGCTGTATGTAAAA                TGCG CATAC CGCA                TTCACCTCACTTTTT  63 84
 LT978_13900 NONE
 LT978_13895 NONE
 LT978_13890 2857580 .. 2857606 - -11.7  -4.64657   GGAAACGCCTAAAAA        GCAGCCGCTCTT TCAG AAGAG-GGCTGC         TTTTGGTTCAGCGTT 100 39
 LT978_13850 2854064 .. 2854074 -  -3.2  -3.41602   CTTATGGTACCACAA                 CAAG CCG CTCG                 GAGCATTATCAATCG  49 57
 LT978_13845 2853624 .. 2853639 - -10.4  -5.95166   CGCAACTAAAAAAAA              CCCGGA TGCA TCCGGG               TTTTTCAAGCGATTG 100 42
        asnB 2850817 .. 2850844 -  -7.7  -5.18726   GTTTCACAATAAAAA        GACCGATATCC TTCAGC GGAAACCGGTC         GCGGCACTGTTATTC 100 35
 LT978_13830 2849994 .. 2850022 -  -7.5   -3.9009   AAGGGATTGCATAAA       CGCCCCGAGCTTC GTTAA GAAGC-CGGG-CG       TTTTTTTATGCTTGC  74 31
 LT978_13820 NONE
 LT978_13815 2846572 .. 2846594 -  -6.2  -5.71712   TTTCACAGAAAAAAA           CGCGCCTT ATCGCTG AGGGCGCG           TTTTTACCGGTGCCG 100 9
        iolG 2845280 .. 2845302 -  -9.2  -5.38249   ATGAATCATAAAAAA           GCAAAGGC ATGCCGG GCCTTTGC           TTTTTTACTTCGAAT 100 44
 LT978_13780 2839546 .. 2839567 -  -3.7  -5.86976   TGAGAAAATAAAAAA           CACCGGT TTTGGTTC ACCGATG            TTTTTGCAGAAAATT  93 40
 LT978_13775 NONE
 LT978_13770 2836736 .. 2836766 -  -7.7  -4.67038   TCTGTAAAAGCAAAA      CAGCCCTCTTGTCT TAGG AGA-AAGAGGGATG       TTTTTTGCGCACGGA  83 47
 LT978_13755 NONE
 LT978_13750 2834230 .. 2834254 -  -7.8  -5.80364   ATTGCAATAAAAAAA         GGCGCCC-CGT TTAG ATGAGGGCGCC          GCTTTTTTATTTTAC 100 32
 LT978_13730 2832060 .. 2832076 -  -3.7  -2.64099   TTTCCTCAGTATAAC              GCAAAAG CGG CTTTTGT              TAACACCTTTGTGCT  45 41
 LT978_13725 2831672 .. 2831711 - -10.9  -5.23292   GCAGACAAAAGAAAA  GCACCTCCAAACTTTAGG ATGTA CCTAAAATCCGG-GGTGC  ATTTTCTTATTACTG 100 35
 LT978_13715 NONE
 LT978_13710 2828859 .. 2828879 - -14.1  -5.18726   GTTTCATAAGAAAAA            CAGGCTGAT CGG ATCAGCCTG            TTTTTTTCAGCATCA 100 18
        argC NONE
        argJ NONE
        argB NONE
 LT978_13690 2824445 .. 2824462 -  -4.3  -2.73203   TGATGAATAATTAAT             TAAAAAT ATGA ATTTTTA              TACCTTTATATCGAA  48 46
 LT978_13685 NONE
 LT978_13680 NONE
        argF 2819295 .. 2819315 - -14.1  -4.96106   GAGAAATATCAAAAA            CCGCTGAAT GAG ATTCAGCGG            TTTTTTTGTTCATCC 100 19
 LT978_13670 2819027 .. 2819042 -    -9  -5.99154   CATTAAATAAAAAAA              CCTGCT ATTC AGCAGG               TTTTTTTGTGTTCAC 100 37
 LT978_13660 2817799 .. 2817822 -  -6.7  -3.84394   CACACACAAGCCAAA          CAGCCCTCT GAAAAG AGATGGCTG           TTGTATTCTATTCAT  67 40
 LT978_13655 2817086 .. 2817100 -  -3.5  -3.48981   AAAAGATCATGACAA               GCCTG GTGAT CAAGC               CATGTTCAACCCCTT  49 113
 LT978_13650 NONE
 LT978_13645 2815915 .. 2815935 -  -7.6  -4.18697   AAAATCATGTGAAAA            GCCACTTC ATGAA AAAGTGGC            TCTCTTTATTTATTC  75 31
 LT978_13635 NONE
        fabF 2813289 .. 2813313 - -11.4  -5.64274   GCACGCACAAAAAAA          CCGGCCACCT TTTTC AGGCAGCCGG          TCAAAAACTGTATTA 100 38
 LT978_13625 2812316 .. 2812333 -  -4.1  -2.90075   TTCCGCTGAAGCAGA             GGGAAAC ATAC GTTTCGC              TATCACAAAATATAG  47 149
 LT978_13620 NONE
 LT978_13615 NONE
 LT978_13610 2808567 .. 2808593 -   -16  -3.56837   TTTTAAATAGGATAA         GAGAGGAAAGGA ACC TCCTTCCCTCTC         CAGGGCTTTTGCTAT 100 37
 LT978_13605 NONE
 LT978_13600 2806632 .. 2806651 -  -9.3  -5.80364   ATTGCAACAAAAAAA            TCTCCCG TTCGTC CGGGAGA             TCATTTCACATTTTT 100 26
 LT978_13595 2805726 .. 2805747 - -13.7  -6.12328   AGAAGATAAAAAAAA           GAGGCGGGA GAAT CCCCGCCTC            TTTTTTTAGTTCACT 100 31
 LT978_13585 2802292 .. 2802320 - -16.2  -4.29227   GTAATCAGTAAGAAA        GGTATATGGGGA CATCC TCCCCATATACC        TTGGGTCTTTTGTTT 100 54
 LT978_13580 NONE
        oppC NONE
 LT978_13570 NONE
        oppF 2798354 .. 2798378 - -17.3  -5.40474   ATGTGCGCAAAAAAA          TCCTCCAAGAC TCA GTCTTGGAGGA          TGATACGTTTATAGA 100 34
 LT978_13560 NONE
 LT978_13555 2796291 .. 2796316 -  -2.1  -3.93769   ACTTTAAAAAAGGAA         TCTTTATAGGTA TTA TA-CTATAAAAA         AGTAAGTGTGAACAG  52 106
         spx 2795772 .. 2795795 -  -7.5  -5.51353   GAAAAATAACAAAAA          GCCC-AAACC GCGAT GGTTTTGGGC          TTTTTCCATGCTTAT 100 53
        mecA 2794149 .. 2794172 -  -9.7  -6.17268   TCAGAACAAAAAAAA          CCGATTTCT GCTGAG AGAAATCGG           TTTGTTATGATGCAA 100 30
 LT978_13530 2792673 .. 2792696 -  -5.4  -3.18274   TTTACTTCAAGCCAA          TTGAAAAAAC GATT GTTTCTCCAA           AAACTTGTGTTGTGA  54 195
        pepF 2790777 .. 2790799 - -14.2  -4.82901   GGGGTTTTAGAAAAA           GCCTGCGCAT TTA ATGCACAGGC           TTTTTTGAATTACGA 100 35
 LT978_13495 NONE
        yjbM 2786340 .. 2786354 -  -2.8  -3.08812   TCCTTTTGAAGAAAC               GGCA AATTTCA TGCC               ATTCCCCTCCTTTCC  44 44
 LT978_13485 NONE
 LT978_13480 2784616 .. 2784641 - -11.2  -5.53991   CAGGCATGAAAAAAA         GCCCGAAACCG GTAAA CGGTT-CGGGC         TTTACATGTGTTCAA 100 27
 LT978_13470 2781569 .. 2781593 - -10.8  -6.14618   GATAAAATAAAAAAA          CCACTTTCCC GCATT GGAAAAGTGG          TTTGGAATTTAAATG 100 220
        tenA NONE
        tenI NONE
        thiO NONE
        thiS NONE
        thiG NONE
        thiF NONE
        thiD 2776306 .. 2776327 -  -4.4    -4.652   AAAGCATGGGAAAAA           GACCGC GGATGTTGAA GCGGTC            TCTTTTTTATCTCGT  68 32
        fabI 2775399 .. 2775419 - -11.9  -5.82036   AGAAGAAAGAAAAAA            GCAATCCCT GAA AGGGACTGC            TTGTTATTTAACGTG 100 33
 LT978_13425 2774683 .. 2774709 -  -6.5  -4.59919   AAAGCATAAAAATAA         GCTGCCGGATT AAAGA ATTCAGGCAGC         TTTTTGTATGGTTAA  77 37
 LT978_13395 2771351 .. 2771379 - -13.3  -5.00616   GCGTTCGGCAAAAAA        CAAAAAAACCGGA AGC TCCGGTTTTTTAG        AAAACGGCTATTTCG 100 228
 LT978_13390 2770792 .. 2770815 - -11.7  -3.12606   TCATACATTAGGGAA          GCACGGGAC TGAACG GTCCCGCGC           TTATCCAAAGTCTTG  83 308
 LT978_13380 2770354 .. 2770379 - -19.1   -4.0942   CACTCAGGATATAAA         GAACCCGGCAG ATCA CTGCCGGGTTC          TTCTCACATAAAAAG 100 67
 LT978_13370 2767671 .. 2767686 - -10.4  -5.41143   TACGGCTCAAAAAAA              CCCGGA GATT TCCGGG               CTTTTTCACACATAT 100 31
         bla 2766838 .. 2766865 -  -6.9  -5.80248   GAAGAGATAAAAAAA        GCCGGCACTCC GTAATG AGAGCGCCGGT         CTTCTTTTTTACGTT 100 34
 LT978_13330 NONE
        metC 2760593 .. 2760619 - -10.2  -6.09196   TCTAAAATAAAAAAA        GGGCG-CGTCA CAAAAT TGACGGCGCCC         TTTTCGTTTATGATC 100 33
 LT978_13320 2760390 .. 2760406 - -12.3  -5.41359   AAGCAAAGTAAAAAA              CCCTTGC TAC GCAAGGG              TTCTGGCTATGATTC 100 33
 LT978_13310 2758271 .. 2758292 -  -2.9  -4.57837   AGACCTTTTTAAAAA           GATTGAAGC TCTA GCACCAACC            AATTCTAAACTTTAC  65 367
 LT978_13290 2755062 .. 2755082 -  -5.4  -5.39721   TCATCATATAAAAAA            GGTCAAGG ATATA CCTTGACT            ATGTATTAAGCTTAC  83 37
 LT978_13285 2753989 .. 2754027 -  -4.7  -2.61094   AAAAGAATCAGCAAT   GCCAATGAAAAAACAAA TGATG TTTGCTCTTTCAGTGTC   CTTATTAAATCCTCA  46 372
 LT978_13265 2751669 .. 2751683 -  -2.1  -3.09933   CCTCAATCCATTCAA               TCCAG TACAC CTGAA               CACTCCTCACCTAGT  43 32
 LT978_13260 NONE
 LT978_13255 2750399 .. 2750413 -  -2.9  -4.20875   CATCAAAAAATAGAA               GATTT TTTCG AAATC               ATGCTGCCACAGTCA  58 83
 LT978_13250 NONE
 LT978_13245 NONE
 LT978_13240 2747860 .. 2747893 -  -2.4   -5.4659   TAAGATAAATAAAAA     TAGACTCCCTCA AAGTTAATGG TGAGGGGGTCTT      GAGTATGCGGCCGAT  75 129
 LT978_13235 2746941 .. 2746951 -  -2.4  -2.61695   CGCACCCGTAAACAT                 CCGG CCC CCGC                 TCCCATAAGTAACAC  40 77
 LT978_13230 2746180 .. 2746225 - -11.9  -5.27335   CCGTGCAAATAAAAA CGGACACCAATCAGAGCATAG TGAG CTGTGCAATGATCAGTGTCCG CAGGCTTTCCGTCTT 100 124
         bla 2745031 .. 2745051 -  -7.6  -5.47431   TCAACATATAAAAAA            CCGTCCAT AAAAA ATGAACGG            CAATGTTTATTTAAG 100 32
 LT978_13220 2744588 .. 2744604 - -12.3  -5.37593   TTTCAAAGTAAAAAA              CCCTTGC GCA GCAAGGG              TTTTAATGAATGAAA 100 87
 LT978_13170 NONE
 LT978_13165 2731877 .. 2731899 -   -15  -5.26316   GCACCTCATAAAAAA           GCCCTCTTTT TAA AAAAGAGGGC           TTGCTAAATAGGACT 100 347
 LT978_13155 2730581 .. 2730617 -   -11  -4.65263   ATGTTTGAAAAGAAA   TGACT-GCAGACAGGAG GCTT CCCCTGTCTGCTATTCA    ACTTTGACCGACAGG  90 19
        fdhF NONE
 LT978_13130 2725340 .. 2725363 - -13.9  -5.27923   GAAGCGCACAAAAAA          CCCGAGCCT TCGGCC AGGCTCGGG           AGAAATGTTCACTCA 100 34
 LT978_13125 NONE
 LT978_13120 2722729 .. 2722754 -  -7.6  -4.91357   AAACATATAACAAAA         CAGGCAGC CGTCCGGTGC GCTGCCTG          TTTCTCAATCAATTT  86 34
 LT978_13110 2721501 .. 2721536 -  -9.2  -5.63103   TGGCAATTAAAAAAA    TTCAGCAGGGAA GCGTAAGCTTTT TTCCCTGCTGAA     TGGTGGTTTATGACA 100 33
 LT978_13090 2718084 .. 2718105 -  -5.9  -3.85504   AGCATGAAAAAGCAA           GATTGTGAA TTCA TGCACAATC            ATTTACAAAAATAAA  64 301
 LT978_13085 NONE
 LT978_13080 2716311 .. 2716339 - -12.6  -6.11644   TTATGCAAAAAAAAA       GACATTGCCGAGA AAAG TC-CGGCAATGTC        TTCTGTATGATCTTA 100 45
        uxaC 2714778 .. 2714792 -  -4.2  -4.09685   TTCCATTTTTTAAAA               GCGGAA ATA TTCCTC               AGCATTCCGGTAACA  61 5
 LT978_13070 2713337 .. 2713347 -  -3.2  -3.21747   CTATTGTATCATTAA                 CGGA CAG TCCA                 TAAAATCACTAAAGT  46 34
 LT978_13065 2712000 .. 2712029 -  -2.2  -5.40072   TCCCCCGCAAAAAAA       GCGTAAACAAAC CGTCCT GTTCGTTTAAAC        GTTTTATTTTCTCAG  75 283
 LT978_13055 2709248 .. 2709269 - -10.1  -4.20354   AAGTGAATGCGAAAA           GGCGGTCTG TTGT CAGATCGCC            TTTTCCCTTATAACG  86 33
 LT978_13050 NONE
 LT978_13045 2707055 .. 2707081 - -15.3  -5.47159   TCTCAATATAAAAAA         TACGTGAAGCC TCTAC GGCTTCACGTA         TTCATTGCTGTTTGG 100 11
 LT978_13040 NONE
 LT978_13035 NONE
 LT978_13030 2705054 .. 2705079 -  -9.1  -4.45544   CCTTACTAAGGAAAA         TAAGGGAATCC CTTT GAATCCCCTTA          AAATGAAAAAGTTAC  84 37
 LT978_13025 NONE
 LT978_13020 2703065 .. 2703092 - -12.9  -4.99645   AGGTTATAAAGAAAA        TCGGGATTAAC TCTTCC GTTAATCCCGA         TTCATTTACTCATAT 100 31
 LT978_13015 2702666 .. 2702685 -  -5.7  -4.34482   TCCTTTAAAAAAAGA            GGGAGAC AGCTGG ATCTCCC             AGAGCATTGGAAATC  68 63
 LT978_13010 NONE
 LT978_13005 NONE
 LT978_13000 NONE
 LT978_12995 2696685 .. 2696708 -  -7.6   -5.8096   GACAAAAAAGAAAAA          GAATATGTAC GCAT ATACATATTC           TTTTTCGGATATGTT 100 40
 LT978_12990 2693319 .. 2693335 -  -5.7  -5.24129   TTTTTCGATAAAAAA              CTGCGGC CGA ACCGCTG              GCAGCAAAAAACACT  89 439
 LT978_12975 NONE
 LT978_12970 2690830 .. 2690849 - -12.2  -4.64763   GCATGCAAAAAATAA            GACCCTTC CAAA GAAGGGTC             TTTATGTTATGTTTG 100 32
 LT978_12965 2689730 .. 2689750 - -13.3  -4.46854   GTATGTAAGAAGAAA            CGGAAGCCC GGG GAGCTTCCG            TTTTCTTGATTACAG 100 35
 LT978_12955 NONE
 LT978_12950 2688368 .. 2688400 - -14.2   -2.6186   ATTCAATTTCAGAAG     CGGCTCGCTTGTCTG TTAT CCGACAAGCG-GCCG      AATGTGTATTATGGA  88 116
 LT978_12935 NONE
 LT978_12930 NONE
 LT978_12925 NONE
 LT978_12920 NONE
 LT978_12915 NONE
 LT978_12910 2684629 .. 2684672 - -16.3   -5.4505   TTTCGGAACAAAAAA GGACACCAATCAAT-GCGCA GCATG TGCGCGATTGATCAGTGTCC GCAGGCTTTCCGTCT 100 64
 LT978_12905 2684020 .. 2684039 -  -3.5  -5.18726   TGTCTATAATAAAAA            GCGGC TTCTAATCGG GCCGC             TTTTTGTGATCGTCT  75 72
 LT978_12900 NONE
 LT978_12895 NONE
 LT978_12890 NONE
 LT978_12885 NONE
 LT978_12880 NONE
 LT978_12875 NONE
 LT978_12870 NONE
 LT978_12865 NONE
 LT978_12860 NONE
 LT978_12855 NONE
 LT978_12850 NONE
 LT978_12845 2674827 .. 2674845 - -13.2  -5.60993   TTTTTTATAAAAAAA             CAGGCCTT TAA AAGGCCTG             TTTCACTCATAATGA 100 47
 LT978_12840 2674286 .. 2674330 -  -3.7  -3.35798   AGTTCTGATGGAGAA TAATGAAGCTCATGCATCGC GTAATA GAGATACACG-GCTTCCTTA TTCCCATCTTTTATC  49 39
 LT978_12835 NONE
 LT978_12830 NONE
 LT978_12825 NONE
 LT978_12820 NONE
 LT978_12815 2667227 .. 2667247 -  -2.5  -2.78405   TTCATGTAAAAAAGC            CCTCTTC GGCAGAT GAAGCGG            CTTTAATAGGCTGAT  42 70
 LT978_12810 NONE
 LT978_12805 NONE
 LT978_12800 2665165 .. 2665175 -  -5.4  -2.62515   AAGCGGCTGATATCA                 TGGT AAG ACCA                 CCTCGTTATTGTTGA  51 12
 LT978_12795 NONE
 LT978_12790 NONE
 LT978_12785 NONE
 LT978_12780 NONE
 LT978_12775 NONE
 LT978_12770 NONE
 LT978_12765 NONE
 LT978_12760 2660329 .. 2660361 -  -7.7  -6.04324   TTAAAAAAGAAAAAA      GGCTGAATCCCGC AATGTGA ACGGGACTCAGCT      TTTTTTTGTTAAAGC 100 34
 LT978_12725 2654545 .. 2654571 -  -6.6  -6.31682   AAAAGCAAAAAAAAA        GATGCC-CCCG TCAAGC CGGAAGGCATC         TTTCATTACTTCTGA 100 42
 LT978_12720 NONE
 LT978_12715 2651247 .. 2651275 - -14.6  -4.54047   TTATTTTACATAAAA        GCACCCTGTCCG CTGGC CGGACAGGGTGT        TTGTTAAGACATATG 100 29
 LT978_12700 2647677 .. 2647705 - -14.8  -5.06451   CATTATGGGAAAAAA        CAAACCCTTTTC ACCGG GAAAAGGGTTTG        CTGATAGAAAAAGTT 100 39
 LT978_12695 2646716 .. 2646729 -  -2.3  -3.79687   ACGTTTGATAAAATA               CCGCA GCAA TGCCG                TTCACCCCTTTAACA  50 35
 LT978_12690 NONE
 LT978_12685 NONE
 LT978_12680 NONE
 LT978_12675 2642148 .. 2642175 - -12.8  -2.72204   TGAAAAGTGAAACAC        GCCGCTCCTTTA ACGG CAAAAGAGCGGC         ATATGTTTCCGCTGT  89 45
 LT978_12670 NONE
 LT978_12665 NONE
 LT978_12660 NONE
 LT978_12655 2638178 .. 2638205 -   -10  -4.86621   AGGTTTAATCAAAAA        GAAAGCTGAC TTTATATT GTCAGCTTTC         TTTTTTGTATAAATG  93 17
 LT978_12640 2635456 .. 2635474 - -11.8  -5.67063   TTCAGCATAAAAAAA             CCGCTTTT AAA AAAAGCGG             TTTGACGATTACCAA 100 34
 LT978_12635 2634687 .. 2634727 - -11.2   -5.0916   CGGGCAATACAAAAA GCCCGGAATAGTC-GTCTC ACAT GAGATTGACTCTCCCGGGC  TTTTTTCCCTCCGTG  93 136
 LT978_12630 NONE
 LT978_12625 2633983 .. 2633996 -  -3.9  -3.14487   GATTATACTGAAAAT               TTGAT AAAA ATCAA                TTTACGAAAGAATTT  48 27
        purU 2632996 .. 2633018 - -10.5  -5.28176   TTCATCCATAAAAAA           CAGCCCGCC TCCCC GGCGGACCG           TCATTAATTAAATAC 100 29
        proB NONE
        proA 2630266 .. 2630289 - -10.4  -5.60993   TTCCGCATAAAAAAA          GCTTACCCTT TTTG AAGGATAAGC           TTAAAAGATTATACT 100 34
 LT978_12605 2629729 .. 2629755 - -15.3  -5.21709   CTGCACAGCAAAAAA         TAAGGATGCCC CGAAT GGGCATCCTTA         TTTTTATTCTGCTGC 100 29
 LT978_12595 2628699 .. 2628723 -   -13  -4.63218   TTTTCGTTAATAAAA          TATCCCGGAT ATGAA ATCCGGGATA          TTCGTTCGTTTCTTT 100 39
 LT978_12590 NONE
 LT978_12585 NONE
 LT978_12580 2626391 .. 2626415 -  -6.5  -5.52909   GAACATGCAAAAAAA         GGATCAGGCG TTTGTC CGC-TGATCC          TTTTTTAATTGAGAC  90 4
        yeiL 2623067 .. 2623079 -  -7.7  -5.53991   CAGGCACGAAAAAAA                CAAGC TCA GCTTG                TATAATGAAAACAGC 100 79
 LT978_12550 2618364 .. 2618391 - -13.4  -4.82901   TTGTTTGTATAAAAA        CAGGCCGCCGGA GTGA TTCGGCAGCCTG         TTTTGTTATGTATGT 100 40
 LT978_12530 NONE
 LT978_12525 2613446 .. 2613474 -   -14  -4.77173   TGCCTATAAAATAAA        CGGAATAAAGGC ATAAA GCCCTTATTCCG        GCAAATCGCTTTCAT 100 18
        mgtE 2611578 .. 2611599 - -12.3  -5.14563   CCGCTGATCAAAAAA           GTCCGCCTC CTGT GAGACGGAC            TTTTTTTATAAAGCA 100 31
 LT978_12510 2610841 .. 2610866 -  -2.7  -2.91036   TATGATCAGAATAAC         GCTTT-TATATC AAA GATGTATAAAGC         CATTGTAAAACTTCT  43 46
        fbpA 2610600 .. 2610633 -    -4  -5.71712   TTTTATATAAAAAAA     TACCCTTATACA TCATTTAATT TGTATAAGGGTT      CCGTTCTTTATAGGG  89 8
 LT978_12500 2609971 .. 2609991 -  -9.8  -6.15717   GAAACAGAAAAAAAA            CACTCTTC ATGAA GAAGAGTG            TCTGTATCCGCTTTC 100 43
 LT978_12495 2609259 .. 2609281 -  -9.2     -4.31   GCAAATCAAGAGAAA           GAGCTGAC GCTTTTG GTCAGCTC           TTTTCAGTCTGATAC  85 19
 LT978_12480 2605149 .. 2605175 - -12.4  -5.08824   TTTTTACGCAAAAAA         GACCTTTGCC GATATAA GGCAAAGGTC         TTGCTAGACATGAAT 100 180
        sigI NONE
 LT978_12465 2601853 .. 2601864 -  -2.2  -4.54727   CGTTTGAAACTAAAA                TGCG TAAA CACA                 TCTTGCCAGAGAAAA  61 255
        htpX 2599984 .. 2600005 -  -7.3  -5.63517   TCTTTAAACAAAAAA           CCTCTGAAA CGAT TGTCAGAGG            TTTTGTTTATTATTT  93 35
 LT978_12445 2598482 .. 2598503 - -13.1  -5.80364   ACGGCAATAAAAAAA           CACCGCTTT CTGA AAAGCGGTG            TCAGCCGATAATCAT 100 26
 LT978_12440 NONE
 LT978_12435 2597528 .. 2597557 - -18.1  -4.39407   CGAAATAATGCAAAA       TACCTCTTAAGCG TTGC CGCTTAAGAGGTA        TTTTTTATTTTTTGC 100 30
 LT978_12425 NONE
 LT978_12420 NONE
 LT978_12415 2593100 .. 2593127 -  -4.8  -4.20516   TTCCGATTGAAGAAA        GAGATCCGGATG AAGT CAGACAGATCTC         AGGCATACGCACCGC  64 217
 LT978_12395 2588432 .. 2588456 -  -4.3   -5.9362   CAAAACATAAAAAAA          CCTCTTCCC TATGAGC AGAAAGAGG          CTTCGTGTTATGTCC  93 179
        mtnW NONE
        mtnX NONE
 LT978_12380 2585902 .. 2585913 -  -5.8  -2.59564   CTTTTATTTTACAAG                CTGC GGCC GCAG                 TGACAGAAGCTTGAG  54 2
 LT978_12375 2585298 .. 2585325 - -15.7  -5.58179   TATTACAATAAAAAA        CCTCTCATGCC GGCGGG GGCATGAGAGG         TTCGGGCGTCTATCA 100 38
 LT978_12370 2584593 .. 2584609 -  -7.9  -5.55664   TCACGATGAAAAAAA              CACCCTG GGT CGGGGTG              TTTTTTATTTAAAGA 100 213
 LT978_12360 2582398 .. 2582419 -  -8.7  -5.49569   CAGTAATATAAAAAA           GGAAGCCTT TCAA ATGGCTTCC            TTTTTTATTTCTGAT 100 30
 LT978_12340 NONE
 LT978_12335 2575857 .. 2575880 - -10.4  -5.88565   GTGACAATAAAAAAA          CAGCCTGA-AC CCT GTGTCAGGCTG          CAAAAGCGGGTTTAA 100 37
        queC NONE
        queD NONE
        queE NONE
        queF 2573245 .. 2573269 - -14.3  -4.84527   GGCAGAGACGAAAAA          TACCCCCGCTT AAA AGGCGGGGGTA          TTTAGGTTATAGTCC 100 62
 LT978_12310 2572652 .. 2572667 - -10.4  -4.38154   ATATCCCGCACAAAA              GCTGCC GCCC GGCAGC               TTTTTCAAATGAATT  89 40
 LT978_12300 2572043 .. 2572064 -  -8.7  -6.09196   GCGAAAACAAAAAAA           GACTCCTCA AGTG CGAGGAGCC            GTCAGCTTCTTGGCT 100 27
 LT978_12295 2571138 .. 2571169 -  -9.6   -5.2696   TCAAAATTGAAAAAA      GCATAGCGGGGAT ATTTTTG ATC-CCGCTATGC      TTACATCGCAAATAC 100 26
 LT978_12290 NONE
 LT978_12285 2569128 .. 2569153 - -20.5  -5.13473   ATTATATGCAAAAAA         GGTGCGGGAGG AATT CCTCCCGCACC          TTTTTATTTCTCTGA 100 29
 LT978_12280 2566972 .. 2566994 - -10.5  -5.94597   GAACATTAAAAAAAA           CAGCCGCCC GTGAT GTGCGGCTG           TCATGTTTATTTTAA 100 32
 LT978_12275 2565736 .. 2565781 -   -15  -3.10597   TTTTTCATTTAAAAG GTGATAAAAAAGGACGCTGC GTTCCA GAACCGTCCTTTTTTATCAC AAAGCTTTCTATTTC 100 34
 LT978_12270 NONE
 LT978_12265 2563543 .. 2563559 -  -5.1  -4.17048   GGGTGTGCAAAATAA              CGGGA TCGTTCT TCCCG              TTTTTTACCCTCAAT  63 91
        ptsG 2561258 .. 2561285 - -16.4  -2.98986   ATATTATATCATACA        GCCGTACTTGTC ATCT GACAAGCACGGC         GTATTTATATGCTTA 100 38
 LT978_12255 NONE
        ptsP 2559190 .. 2559211 - -12.3  -5.63374   CGAATATGAAAAAAA           CCAGACGGC TTAT ACCGTCTGG            CTGTTGTATTACTTA 100 34
 LT978_12245 NONE
        splB 2557753 .. 2557773 -  -9.7  -5.86061   GCGCAGCAAAAAAAA            GAGCCGTCA TGC CGACAGCTC            CGCCTTACGTAAAAT 100 30
 LT978_12235 2555637 .. 2555676 -    -3   -2.7035   GCGATTCATATATCA  CTCTTTCATGTCTATATTA CCA TATTATAGGC-TGATAGAG  ACCGCGTCACAAGGT  41 32
 LT978_12230 2554247 .. 2554261 -  -2.8    -5.055   GGAATTCTCAAAAAA               CAACAT GTA ATGATG               AAATCTCTGAATCGA  70 500
 LT978_12210 2550130 .. 2550162 -   -12  -3.90112   TTTTCCTGAATGAAA      GAAAGGGCGCACGA TATGT TCGGCCGCCCTTTC      ATTTGTTATTTTTTA  95 31
 LT978_12205 2548146 .. 2548164 -   -11  -3.70149   TGCAGACTATTTAAA             CAACGGCA TAA CGCCGTTG             TTTTTTTATTGTTTC  83 31
        cheV 2545486 .. 2545506 - -12.6  -5.00616   TTCCGCCGCAAAAAA            GCCGATGC GTCAT GCATCGGC            TTTTTTCTATTCAAT 100 32
        fadH 2541121 .. 2541151 - -11.2  -5.40873   AATAGAAAAATAAAA       CAAGCGAACGGTCA CCT TTAACGTTCGCTTG       TTTTGCAAAATATGT 100 49
 LT978_12155 2539133 .. 2539147 -  -5.6  -5.96219   CATTTATAAAAAAAA               GCGGCA TAC TGCAGC               CGCTTTAAAGTAACC 100 30
 LT978_12150 2538418 .. 2538431 -  -4.5  -3.15757   CATAATTTAATAAAG               CTCCG CTTG CGGAA                GACCGGAAGCTTGGT  50 63
 LT978_12145 NONE
        abbA 2537456 .. 2537478 -  -3.5   -5.4505   TCCGTCAATAAAAAA           GATACTC TTTGCAATC GAGTATC           AATTTATAGGCCGCT  78 43
 LT978_12135 2536884 .. 2536918 -  -5.9  -3.59979   TTCTGGCATGCGAAA     GAACAAATAGGCT GATCGTGCG AGCCTACTTATTC     AATGATCTGATATGA  62 16
        ccpC 2535866 .. 2535883 -  -9.9  -6.28401   TAAAAAATAAAAAAA             GACAGCA TGAT TGCTGTC              TTTCTAAAATGGGCG 100 29
 LT978_12125 NONE
 LT978_12120 NONE
 LT978_12115 2533913 .. 2533928 -  -2.6  -4.12868   AGACAAGAAAAAAAG              GAACAA GCCT TTATTC               TGCCGGCTGGCTGCA  55 20
        dapD 2533088 .. 2533111 - -12.5  -4.06864   TTGAGATAAGAATAA          GGCGTGGAT TTTATC ATCCACGCC           CATTCTATCAAACCA 100 45
 LT978_12105 NONE
 LT978_12100 2531602 .. 2531619 - -11.3   -5.0916   CGCCGAATAGAAAAA             CCGAAGC GTAA GCTTCGG              TTTTTTCTTTTTAAT  93 36
 LT978_12090 2529980 .. 2530002 -  -4.9  -5.65177   ATAGTCACAAAAAAA          CCCTGTTACC TAAC GGCAA-AGGG           TTTGCAGAACCGAGA  85 67
 LT978_12085 2528964 .. 2528984 -  -9.7  -5.61824   GAAAACGCAAAAAAA            CTGCTTGAG TAA CGCAAGCAG            TTTTTACTGTTTTAT 100 37
 LT978_12075 NONE
 LT978_12070 NONE
 LT978_12065 NONE
        mobB NONE
 LT978_12055 NONE
        moaD 2523635 .. 2523665 - -14.1  -5.03994   GCCTATATACAAAAA      GAGCCGGATG-GCA ATGA TGCACACCCGGCTC       TTTTTTCACCCTCCG 100 31
 LT978_12045 NONE
 LT978_12040 NONE
 LT978_12035 NONE
 LT978_12030 2519601 .. 2519621 - -15.5  -5.63645   TTAAAACACAAAAAA            CCCCATGCA GAC TGCATGGGG            CGCCGGTTATTCATA 100 32
 LT978_12025 NONE
        pfkB NONE
 LT978_12015 2515740 .. 2515756 -  -7.2  -5.11613   ATATGATTGAAAAAA              GCGCCC GTAAA GGACGC              TTTTCGCTTATTTCT  85 33
        lepB 2515019 .. 2515048 -  -9.9  -5.27335   TTTGCCAAATAAAAA       CGCC-TGCTGTCCG AAT CGGGCAGCGCGGCG       TTTTTATTTTGTCTG 100 29
 LT978_12000 2512941 .. 2512956 -  -6.8  -5.72622   TTCATAAATAAAAAA              GCAGAG TCTC CCCTGC               TTCTTTATTACGCGT 100 33
 LT978_11995 2511922 .. 2511939 -  -8.4  -5.80364   ATTTTAATAAAAAAA             GGAGGC GATCAG GCCTCC              TTTTTATTTCGCTTC 100 29
 LT978_11975 2508783 .. 2508803 -  -4.6  -4.78839   AAGTTCATAATAAAA            GGACGGAA TGATG CCCCGCCC            TTTTTGCTGATTATG  71 36
 LT978_11970 NONE
 LT978_11965 NONE
        ktrC 2505780 .. 2505797 -  -8.4  -4.03793   TGACATAATAAAAGA             CCGTCC TTTTAC GGACGG              CTTTTCACTTTGTAT  79 30
         ade 2503894 .. 2503914 - -11.9  -5.42259   GGAGGTCTAAAAAAA            CTGCACTCA TTA CGAGTGCAG            TTTTTTTATTGCAGC 100 31
 LT978_11940 2500850 .. 2500871 - -14.5  -4.64676   TGACCGTTAAGAAAA           CCGGCACTT CCCA AAGTGCCGG            TTTTCTTTATTTCAA 100 32
 LT978_11925 2498800 .. 2498818 -  -6.1  -6.11229   AGCAAAATAAAAAAA             CCTTTAT GCCGG ATAAAGG             TTTAAAAGCAAAAAG 100 326
        fabD NONE
 LT978_11915 NONE
 LT978_11910 NONE
 LT978_11905 NONE
 LT978_11900 NONE
 LT978_11895 NONE
 LT978_11890 2450428 .. 2450454 - -14.6  -4.13995   CTTTTACAAAGTAAA         GAAACAGAGCAG GTG CTACTCTGTTTC         ATCAATAATTTCAAG 100 14
 LT978_11885 NONE
 LT978_11880 2445372 .. 2445400 - -21.1  -3.18383   ACGGGCAGTTAGCAA        TCGTCCCGCCTGC CGG ACAGGCGGGACGA        TGCTTTTGTCTAATT 100 39
        pdhA NONE
        pdhB 2442808 .. 2442822 -  -2.1  -3.40522   ACTCCTTCATCATAA               GAGAA AAGGA CTCTC               TTTACCGTCTTTTAT  46 50
        pdhC NONE
        lpdA 2439933 .. 2439960 - -17.8  -5.18726   CTTGCACAATAAAAA        CAGCCCCCGCTT TTAT AAACGGGGGCTG         TTTCTTTGTTACATC 100 42
 LT978_11850 NONE
 LT978_11845 2438241 .. 2438270 - -12.9  -4.46072   TCCAATAAACATAAA       GAAGCCCGAAACG AAAT CGTTTCGGGCCTT        TTTTACGCTTTTTAC 100 37
 LT978_11835 2436287 .. 2436307 - -10.3   -5.1523   CTCATAACATAAAAA            GCGGGCCGA TTG CCGGCTCGC            TTTTGTCTACATTTT  93 32
 LT978_11825 2435188 .. 2435208 -  -4.7  -4.65895   CTTCTCACGTAAAAA            CGAACCA TTTCCTG CGGTTCG            TTTTTACTATTCTTT  70 39
        suhB NONE
 LT978_11815 2433806 .. 2433837 - -14.6  -3.90744   TCGGCTTGTAAACAA      GAAAAGAGACCGGA GAAA TCCGGTCTCTTTTT       TATATCTGAACATTT 100 40
 LT978_11805 NONE
 LT978_11800 2431413 .. 2431439 -  -8.1  -4.51799   AGTAAACGGATAAAA        CGCCCGG-T-CAT GTC ATGCAGCCGGGCG        TTTTTTTAAATCAGC  83 31
        typA NONE
 LT978_11780 2427913 .. 2427970 - -21.2  -5.24449   GATAAACTGAAAAAA TAAACCGCAATAAAA-AATGACC-CGCC GGAA GGCAAGGTCATTTTTTTATTGCGGTTTA GCTGACTGGCTTTTT 100 13
 LT978_11765 2425316 .. 2425331 -  -3.2  -4.44046   CCGAGCCGAAAGAAA              GCGC TGTCCTGT GCGC               ATTTATTTCAAAATC  63 192
        glsA NONE
 LT978_11750 2423552 .. 2423581 -  -5.1  -5.52909   GAAGATGCAAAAAAA       CGGTTTACGGTTAT AAA AAAACC-CAAACCG       TTGAATAGTTTGAGT  85 49
 LT978_11745 2422200 .. 2422211 -  -2.2  -3.05022   TTTTTTAGAGATACA                CAGA TTTT TCCG                 TCTGCCGTCTTTTTA  42 3
         pyc 2418617 .. 2418656 -   -16  -2.87132   CGGCCTTTTTACATA  TAACAAACCTGAT-CGCAC ACG GGGCGGATCAGGTTTGTTA  TGTTTATTTTTTACG 100 36
        cyoE 2416214 .. 2416228 -  -4.2  -3.86944   TGCACAAGCAGTAAA               TCTGCT TCC AGCCGA               AATACTTCATTTCCT  57 180
        coxB NONE
        ctaD NONE
        ctaE NONE
        ctaF NONE
        ctaG 2411302 .. 2411322 -  -9.8  -5.52096   AAATGTAATAAAAAA            GTACAGCA TATTC TGCTGTAC            TTTTTTTATGAGACG 100 31
 LT978_11695 NONE
 LT978_11690 2409197 .. 2409221 -  -5.7   -5.9667   AAAAACATAAAAAAA         CCGC-G-GGGG ACGCG CCCCTCTGCGG         TTTTTTACTGCCAAG 100 30
 LT978_11685 NONE
 LT978_11680 2408332 .. 2408345 -  -2.3  -2.79116   TGCATACATAAATAC               GCACC TCCA GTTGC                TAGTTTACCATGAAA  41 76
 LT978_11675 2407858 .. 2407877 - -12.2   -4.1899   TCATTTTATGTAAAA            GACGAGAC GGCC GTCTCGTC             AGGAAACTTTGCATC  95 24
 LT978_11670 2407519 .. 2407538 -   -15  -2.96822   TAAGGAATAGAAGGA            CCCCGCAG GTAT CTGCGGGG             ATTTTTTTATATACC 100 32
 LT978_11665 NONE
        rsmD NONE
        coaD 2406180 .. 2406209 -  -7.9  -5.64274   GCACGGACAAAAAAA       GGATGAGACGC CGATCAGC GCTTCTCATCC        TTTAAATTTCTGCTT 100 20
 LT978_11645 NONE
 LT978_11640 2402959 .. 2402979 -  -8.3  -5.43866   GAATGCGTAAAAAAA            GCACCTG CCTGTAT CAGGTGC            TTTTTACTTTCAGCT 100 18
 LT978_11630 NONE
        rpmF 2400736 .. 2400769 - -16.9  -5.96219   GAGGGACAAAAAAAA     GAAAAGCGCAGGAAC CGAG ATTCCCGCGCTTTTC      TTCATACATTAATTG 100 34
        gerR 2400012 .. 2400038 -  -3.7  -5.55769   CGGCATAATAAAAAA        CCGGCC-G-GG CTGCCGC CCTCAGGCCGG        TTCATTTTACAGGCT  83 32
 LT978_11610 NONE
        bshC 2396738 .. 2396754 - -10.9  -6.32216   ACACATAAAAAAAAA              CCCTGAA CTA TTCAGGG              TTCTTTAAAACTTTA 100 43
        mraZ NONE
        rsmH NONE
        ftsL NONE
        pbpB 2392634 .. 2392659 - -16.9  -5.24129   GCGGCGCATAAAAAA         GAAGCCCGCGG GCAT CCGCGGACTTC          TCTGTCCCGTTAATC 100 35
 LT978_11580 2390602 .. 2390625 - -13.9  -4.46212   CTCTTTATGATAAAA          GGCAGCCGA AAACAA TCGGCTGCC           TCAAAAAGACTCATT 100 36
 LT978_11575 NONE
        mraY NONE
        murD NONE
       spoVE 2385286 .. 2385305 -    -5  -3.41393   ATCACATAGCGATAA            CCCTGT TTTTTAGG ACAGGG             TTATTGATGTTGTCT  56 91
        murG NONE
        murB 2383151 .. 2383176 -   -12  -4.65895   CGTCTGATTGAAAAA         CAAACGGCAT GCTGTG ATGCCGTTTG          ACATTTGTTAAAAGT 100 75
 LT978_11545 2382292 .. 2382307 -  -6.2  -3.09732   GAATCACCTTAAAAT              TAGTTC TTTA GAACTA               TTAATCATTTTCTTT  57 26
        ftsA NONE
        ftsZ 2379228 .. 2379251 - -11.8   -5.8096   CACAAAAAAGAAAAA          GGACAAAACC ATGT GGTCTTGTCC           TTTTTTACATCAGCC 100 35
 LT978_11530 2374661 .. 2374683 -  -6.2  -5.26875   CCTTCAACTAAAAAA           GTGCTGCC GTGATTT GGCAGCGC           TCTGTTTTTACTCAT  84 33
     spoIIGA NONE
        sigE NONE
        sigG 2371814 .. 2371836 - -13.6  -5.15634   CATCGCATGAAAAAA           GCCTTTAAAC AAG GTTTAAAGGC           TTTTTCCGTTATTGA 100 34
 LT978_11510 2370768 .. 2370791 -   -14  -5.14563   GGCTGTATCAAAAAA          CCCGTTTCAT TAAA ATGAAACGGG           TAAAAAACGGATCTT 100 153
 LT978_11505 2369438 .. 2369448 -  -2.4  -3.29471   TTCCTATTATATGAA                 CGGC CGG GCTG                 AACCTTGTCACATCG  45 33
 LT978_11500 2369137 .. 2369156 -  -7.1   -3.9941   CTTTTTACAAGTAAA            GGGAGGA TTACGC TCCCCCC             TTTGGTTCATTTACA  72 13
        pgeF NONE
 LT978_11490 NONE
        sepF NONE
 LT978_11480 2366678 .. 2366697 - -13.6  -3.40597   CTTTCTATGTAAAGA            GGCTTGGC TGGT GCCAAGCC             CGTATCAAACTGTCG 100 44
 LT978_11475 2365871 .. 2365895 -  -2.1  -5.65177   AGATGGAGAAAAAAA          CTGAAAAAACG ACT CATTTTTGCCG          TTCAAATGTAACTTT  79 14
      divIVA 2364992 .. 2365021 - -12.9  -6.14618   CAGAAAATAAAAAAA       GCCCTCTCATCCC ATAA GGGACGAGAAAGC        TTATCTCGCGGTACC 100 299
        ileS 2362155 .. 2362176 - -15.1  -5.08824   CTGGCATGTAAAAAA           GCGCCCGGC TGAC ACCGGGCGC            TTTCTCATTTATTAT 100 37
 LT978_11460 2361658 .. 2361684 - -10.2    -4.053   ATGAGCGTATACAAA         CAGACGCTGT CACTCAT ACAGCGCCTG         ATCATATGCATAATC  85 8
        lspA NONE
 LT978_11450 2360037 .. 2360061 -  -8.6  -5.68489   TATAAGAAGAAAAAA         CCCCTCC-TGC CAGA GCATAGAGGGG          TTCCTTTCCAGGACC 100 152
        pyrR 2359341 .. 2359365 - -10.1  -5.63504   AATGGTATAAAAAAA          CCTCTTTGC TTTTTGC GCAAAGAGG          CATACAAAGCCCGGC 100 114
        pyrP 2357887 .. 2357911 - -12.2  -5.03145   GAAGGCCGTAAAAAA         CACCCCG-GTC TATA GACTCGGGGTG          CGGTTAAAGAGAGAA 100 103
 LT978_11435 NONE
 LT978_11430 NONE
 LT978_11425 NONE
        carB NONE
 LT978_11415 NONE
 LT978_11410 NONE
        pyrF NONE
        pyrE 2348107 .. 2348129 -  -9.2  -5.36441   TTTTCATATAAAAAA           CTTTCAATCC AGC GGAATGAAAG           ACAGTGACCCGGTAT 100 249
 LT978_11395 NONE
 LT978_11390 2346189 .. 2346201 -  -2.7  -2.71712   CGTGCGGTGCTAAAC                TCATA ATA CATGA                TTCCTCCCAGTTAAC  41 65
         sat NONE
        cysC 2344351 .. 2344364 -  -5.9  -3.30635   GAAATCTTCCCAGAA               CAGCC GCGA GGCCG                CACTTCAGCTATTTT  58 98
        cobA NONE
 LT978_11370 NONE
 LT978_11365 2342254 .. 2342279 - -15.5  -5.34555   GGACAGTATAAAAAA         CACCCTGCCTG ATGA CAGACAGGGTG          TTTTTTATGGTCTTC 100 30
 LT978_11355 2337318 .. 2337340 -  -8.5  -5.13722   GTTATCAAAATAAAA           GGGCAATAG ACATG CTATTACCC           CTAAGATTATATCAT  91 47
 LT978_11350 2336351 .. 2336362 -    -3  -4.07568   GTTCCCCCTGTAAAA                TAGA CGTC TCTA                 GTGTAACCTGAAGAG  55 68
        remA NONE
         gmk NONE
        rpoZ 2335192 .. 2335219 -  -7.9  -5.58209   CCAAACGGAAAAAAA        TAACAACCTAT GTAGAG ATAGGTTGCTA         CGTGTGCTTGTTATT 100 36
       coaBC NONE
        priA 2331505 .. 2331519 -    -5  -4.56597   TTTGCCCTCCAAAAA               CTAATG TTA CATCAG               CATGTACGGATTCAT  70 17
         def NONE
         fmt NONE
        rsmB NONE
        rlmN NONE
 LT978_11300 NONE
        pknB 2324888 .. 2324903 -  -3.2  -2.57881   TAACGCTTTTATAAT              TTTGCC CTCA GGCATA               GGGTCCCTCCTTATC  43 39
        rsgA NONE
         rpe 2323320 .. 2323343 -  -6.7  -4.16943   TCTTAGACGCGAAAA          GAG-CCGGCG GCTTT CACCGGGCTC          TTTTTCAGCATGTTT  71 39
 LT978_11280 NONE
       spoVM 2322414 .. 2322438 -   -10  -3.89085   ATAAGCAAAAATGAA          CGCCTGCC CTTTTATGC GGCAGGCG          TTTTTTATGCGTTCA  83 67
 LT978_11265 NONE
 LT978_11260 2319878 .. 2319922 - -11.5  -4.46112   CCGCAGGTAAATAAA GGCATAAGAATAGAAGGGCCT GAT AAGCCCTTCTATTCTGCCGCA AATATATATGGATAC 100 13
       sdaAB NONE
       sdaAA NONE
        recG NONE
        fapR NONE
        plsX NONE
        fabD NONE
        fabG 2312730 .. 2312742 -  -3.4  -5.00616   TTCGTTTTTAAAAAA                CTAG AGAAA CTAG                GGTGAAATTTTAAAA  69 49
        acpP 2312415 .. 2312434 -  -8.5  -3.64682   GATTAAAGGGCTAAA            GCCCCGC TGTCAG GCGGGAC             TTTTAGCATCAGCTT  73 39
        rncS 2311536 .. 2311557 -    -8  -3.75535   GCAGACATACTGAAA           TCCCCCTA GGGATA CAGGGGGA            TTTTATTGTTTCGTA  72 28
         smc NONE
        ftsY 2306849 .. 2306877 -  -9.8  -5.61596   ATGCGTATAAAAAAA        CGAGTATAAAAC CGTCC ATTTTATACTCG        TTTTTTATTCATTAA 100 37
 LT978_11200 NONE
 LT978_11195 NONE
         ffh 2304205 .. 2304225 -    -4  -3.61398   GTTTTTTCTTAACAA            CGGTTTTA TCATG TATAACCG            ATTACATAAAAGGTA  53 27
        rpsP NONE
 LT978_11180 2303578 .. 2303598 -  -3.9  -5.42259   TTACGTGTAAAAAAA            GGGGAGG TGCCGGC CCTCTCC            CTTTTTCAGTCAAAT  79 31
 LT978_11175 NONE
        rimM NONE
        trmD 2301813 .. 2301824 -  -2.2  -3.50853   GCTTCTGAAGGATAA                GCCT CCTT AAGC                 CACAAGTAGTATCTT  46 71
        rplS 2301342 .. 2301365 - -10.4  -5.71712   TTTCATATAAAAAAA          GAGCCTGTTA CGGG TAACAAGCTC           TTTTCGTTCGTTATC 100 42
        ylqF 2300366 .. 2300393 - -11.4  -5.00884   ATTCTGCGGAAAAAA        TAAAGACCCGCA TCGC TGCGCGTCTTTA         TTCTGATGGTGCTTC 100 23
 LT978_11150 NONE
 LT978_11145 NONE
 LT978_11140 NONE
        sucC NONE
        sucD 2295257 .. 2295283 - -16.6  -4.72272   TTTTTTCAGCAAAAA         CAGGAACAGCCG TTA CGGCTGCCCCTG         CTTCGATCAGTGCGT 100 32
        dprA 2294305 .. 2294323 -  -6.8  -3.57908   TATTAAATATTACAA             TACCGTTT GTC AAACGATA             TTTCAAAAGGGTTCC  65 28
        topA 2292046 .. 2292067 - -10.9  -4.14627   CTTCCACACAAAGAA           GGTGAGCAA GGCT CTGCTCACC            GCTACTTCTGTGGTT  86 27
       trmFO 2290674 .. 2290688 -  -4.2  -3.55219   AATGGTATCATATAA               TGCATC GAA GTTGCA               ATGAAAAGCTATATC  55 34
        xerC 2289697 .. 2289707 -  -3.2  -2.72761   GAAAAGATGACATGA                 GAAG GGC CTCC                 TTTTAATTTTCTTTA  44 28
        hslV NONE
        hslU NONE
        codY 2286877 .. 2286904 -   -12  -5.60993   TTGTCCATAAAAAAA        GCAGGACCCCCA TTTT CAGGGATCCTGC         TTTTGTCTTAATGAG 100 33
        flgB NONE
        flgC NONE
        fliE NONE
        fliF NONE
        fliG 2282707 .. 2282721 -    -5  -2.69964   TGTTTAATGATATTA               GACAAT AAT ATCGTC               TCCTCCGCCTCGCGC  49 8
        fliH NONE
        fliI NONE
        fliJ NONE
 LT978_11050 NONE
 LT978_11045 NONE
        flgD 2277760 .. 2277770 -  -2.4   -2.7976   CGTAACATGTTAAAT                 TCCC CCT GGGT                 TTCTTTTTATTTAGA  41 32
        flgG 2276950 .. 2276962 -  -6.9   -3.3344   ATGCAATCCGGAGAA                GCGGC CTA ACCGC                CTCTCCTCCCTCCTT  64 39
 LT978_11030 NONE
        fliL NONE
        fliM NONE
        fliY NONE
        cheY NONE
        fliZ NONE
        fliP NONE
        fliQ NONE
        fliR NONE
        flhB NONE
        flhA NONE
        flhF NONE
 LT978_10970 NONE
 LT978_10965 NONE
        cheA NONE
        cheW NONE
        cheC NONE
        cheD NONE
        sigD NONE
 LT978_10935 2260132 .. 2260144 -  -4.8  -3.28924   CATTTTTGTGCAGAA                CTGC CGTTT GCAG                CACCCTCTGCATAAA  54 98
        rpsB 2259293 .. 2259321 - -12.6  -5.00616   TTTTTCTTGAAAAAA        GGTGATAAAAGG CAGTC CCTCTTATCACC        TTTTGATTAGGTTAC 100 37
         tsf 2258283 .. 2258307 - -10.8  -4.61633   ATATAGTTTTAAAAA          TAGGGAACAC AAGTA GTGTCCCCTA          TACTGCCTGAAAAGC  90 70
        pyrH NONE
         frr 2256861 .. 2256897 -  -2.4  -3.29038   AATCAACAGTATTAA    CAAAAAAACCCCCT GTAAACATG AGAGGGTCTTTTCA    CATTATCTATTGTAC  45 52
 LT978_10910 NONE
 LT978_10905 2255208 .. 2255227 -  -3.6  -2.62983   CTTATTTTCATATTA            GCCTTTCT CATG AAAAAAGC             GCAAGCAGAAAGTAT  45 13
         dxr NONE
        rseP NONE
        proS 2250555 .. 2250569 -  -9.2  -3.69216   TGCTGATTCAAAAGA               GCCACC ATC GGCGGC               GAGGTTCCTTCAAGC  78 463
        rimP NONE
        nusA NONE
        rulR NONE
 LT978_10865 NONE
        infB NONE
 LT978_10855 NONE
        rbfA 2241273 .. 2241309 - -15.3  -2.74784   ATCCCGTAAAACGCA    GAAAAGAGGACAGACGA CAC TCGCCCATCCTCTTTCC    CATTATTCAGACGGT 100 28
        truB NONE
        ribF NONE
        rpsO 2238878 .. 2238893 - -10.4  -5.36965   TAATACGATAAAAAA              GCGGGA ATCC TCCCGC               TTTTTACGATTATCG 100 35
         pnp 2236568 .. 2236589 -  -8.7  -4.64861   CTTTCTCAAAATAAA           GAAGCC-GGG TCT CCCAGGCTCC           TTGTTAGGTTTTCAT  86 41
 LT978_10825 2235519 .. 2235532 -  -8.1  -3.40597   CCTCCTATTCAAAGA               CAGGC AACT GCCTG                CTACTTCATCAGCCT  71 26
 LT978_10820 2234226 .. 2234250 -  -5.6  -6.15828   GGGAGCAAAAAAAAA          TGCCTGCCCC GTACA GAGGCAGACT          GCTTTGCAGCTTAAG 100 36
 LT978_10815 2233882 .. 2233904 - -14.9  -5.60993   TTTTTCATAAAAAAA           GCACCGGCT GTATG AGCCGGTGC           TTGCAAAAAATGAAT 100 46
        dpaA NONE
        dpaB 2232229 .. 2232241 -  -3.4  -3.34902   TTTTACCATAGAATA                GTCA CGGAT TGAC                CGAATTTTTTTATTC  48 69
         asd 2231051 .. 2231084 - -15.5  -3.06302   ATTAGTCTGACGTAA     CAGAAGAGAGC-AGGC AGA GCCTTACTCTCTTCTG     TTCGCCTATAGAAAA 100 51
        dapG NONE
        dapA 2228848 .. 2228880 -  -4.1  -4.56961   AATATGTATACAAAA      CGGTCAAACTCAC GATAAAA ATGAGAATGACCG      CGTATTTCAACTGTA  66 52
        rnjB 2227025 .. 2227055 - -17.7  -5.16841   GGACATGAACAAAAA       CAAAGCCGGAGCA TCATG CGCTCCGGCTTTG       TAACATTATACTTCC 100 31
 LT978_10780 2226206 .. 2226222 -  -3.7  -3.90318   GCATGACGGTATAAA              GGATCAT TGA ATCATCC              TTCCTTCCTCGCCCT  57 12
 LT978_10775 2225921 .. 2225939 -  -7.4  -4.74215   ACATCATGAAGAAAA             GCAGCC TTTTGCC GGCTGC             ATTTTTCTGTAGGAT  81 89
 LT978_10770 2223497 .. 2223519 - -11.4  -4.18494   CATTTTCAGTGAAAA           CTCTCTCCTT TTT AAGAAGAGAG           CTCATCATATTGTTC  90 14
 LT978_10765 2222637 .. 2222655 -  -7.4  -5.95539   CGGCAAATAAAAAAA             CAGACACA TGA CGCGTCTG             TCTTAAAAACGTTTT 100 28
 LT978_10760 2221306 .. 2221326 -  -8.3  -6.17669   AATAAAATAAAAAAA            GACAGTGCA GAT TACACCGTC            TTTAATGATTCCTTT 100 16
 LT978_10755 NONE
 LT978_10750 2217603 .. 2217626 - -14.6  -5.72053   TAAGGAAACAAAAAA          CCTCTGCCCG AAAA CAGGCAGAGG           CATTGAACGTTATTT 100 35
 LT978_10745 NONE
 LT978_10740 2214893 .. 2214915 - -12.1  -4.82901   CTTTCCCCAGAAAAA           CATCCCTCA GGGCG TGAGGGATG           TTTTGTTATGATTTT 100 31
 LT978_10735 NONE
 LT978_10730 2213781 .. 2213800 -  -7.8   -5.9362   GAAAACATAAAAAAA            GAGAGGAG AAAT CCCCCCTC             TTAATGAGTGCTGTT 100 26
 LT978_10725 2212889 .. 2212899 -    -4  -4.87626   TTCCAATATTAAAAA                 TCAA AGC TTGA                 AAAACCGGTCTGGTC  71 8
 LT978_10720 2211930 .. 2211952 -  -7.8  -5.08601   GGACGTGAAGAAAAA           GTCATCTTAA TCG TTCAGATGAC           TTTTTCCCCTTTTAT  89 37
        pgsA NONE
 LT978_10710 2209940 .. 2209972 -  -2.7   -5.4505   TTTGCCAAGAAAAAA      GCGAACGCATA TTCGGATTTTT TCCGCGTTCGC      TTTTCTGCAAAAGAG  76 93
        recA 2208788 .. 2208811 -  -8.2  -6.08563   AACATACAAAAAAAA          GAGCGGAA ATTGCTTA TTCCGCTC           TTTTGATCGTGTTTT 100 40
 LT978_10700 2207270 .. 2207305 -  -8.4  -2.80895   CTCAACATACAGAAC    CTTCACA-GGGAATGAG TCT CTCATGCCCTTGTCAAG    TTTAAATGGTTTAAC  66 196
         rny 2205600 .. 2205626 - -12.5  -5.47821   AGGGACTCAAAAAAA         TAAAGTGATGC GCTAA GCATCACTTTA         TTTTGCATACTCTAC 100 23
 LT978_10690 2204602 .. 2204623 -  -5.9  -2.66711   TTTACAATGGATAAG           TGAGTGTTC ATTA GAACAATCA            TTATTAGATGTTGCT  54 171
       spoVS 2204259 .. 2204287 - -15.4  -5.16841   TGACAGCAATAAAAA        CAACCTGCTCGC CTTAC GCAAGCAGGTTG        AGAATGTACATGTTT 100 47
         tdh NONE
 LT978_10675 2201794 .. 2201811 -  -7.7  -5.82036   ATAAGAAATAAAAAA             GAGGGAA TCAT TTCCCCC              TTACACAAGCTGAAG 100 26
        miaB NONE
 LT978_10665 2199682 .. 2199704 -    -7  -5.66989   TAAACAGCAAAAAAA          CAC-GGGCC GATGAA GGCCCCGTG           TTTAAATAGAACAGC  93 27
        cotE 2198873 .. 2198903 - -11.8   -5.4251   TTTATATATAAAAAA       GAGACTCGGGGTGT TAA ACTCCCCTAGCCTC       AACTTATTCTTCAGG 100 29
        mutS NONE
        mutL 2193917 .. 2193939 - -14.2  -3.35072   AAGAACTAAATGTAA           GGGGGACTAA TTA CTAGTCCCCC           TTGACTAACTTGCGG 100 396
 LT978_10640 2191801 .. 2191819 -  -7.4  -3.68962   TTGGAATAGATATAA             GCAGAATG TCC CATTCAGC             CTGCCCGGCGCTTTT  67 159
        fabD 2190612 .. 2190640 -  -2.5   -2.8733   CTGTCCAGAAAACAT        GAAAACAATTG GCTGGTT CATTTGTTCTC        CTTTTTGCTCTTTAT  42 154
 LT978_10630 NONE
        fabD 2187422 .. 2187435 -  -5.3  -3.01712   TTCGTCTTGTCAACA               CGTTT GCAG AAACG                AGCCTAACTTCTGAT  53 6
 LT978_10620 NONE
 LT978_10615 NONE
 LT978_10610 NONE
 LT978_10605 NONE
 LT978_10600 NONE
 LT978_10595 NONE
 LT978_10590 NONE
 LT978_10585 NONE
 LT978_10580 2121490 .. 2121511 - -11.5  -5.00616   CTGTTTGTGAAAAAA           GCGGCCGGA TTGC TCCGGCCGT            TCTCTATTACCGTTT 100 32
 LT978_10570 2119431 .. 2119446 - -10.4  -5.75599   CAAAGCATAAAAAAA              CTCCGG CGAA CCGGAG               AAGTTACTGAACGAT 100 29
 LT978_10565 2118612 .. 2118629 -  -7.7  -6.01725   AATAAAAAGAAAAAA             CGCCGCTG ATT CAG-GGCG             TTTTTTTATTGGTTT 100 31
 LT978_10550 2116249 .. 2116261 -  -4.7  -6.09133   GAGGGCAAAAAAAAA                GGGAG GAA CGCCC                GAATTTTCAGGGGCG 100 69
 LT978_10545 NONE
 LT978_10540 2114797 .. 2114823 - -11.6  -5.91981   AAAAGCTAAAAAAAA         TCAAACGGCCCG GAG CTGACCGTTTGA         ACTCGTCAAGCTCGG 100 31
 LT978_10520 NONE
        miaA NONE
         hfq 2111886 .. 2111902 -  -6.6   -4.9725   ACGCGCATAGAAAAA              GACCAT TGTTC ATGGTC              TTTGTCAAAAAGTCT  81 39
 LT978_10505 NONE
 LT978_10500 2111143 .. 2111174 -  -8.8  -4.15235   AACGCCCAAAAAAGA      GAGCAGAACGAGAA TCAT CTCTCATCCTACTC       AAGGTGTCATGTGTA  79 97
        nrdI NONE
        nrdE NONE
        nrdF 2107516 .. 2107536 - -12.7  -4.28774   CCACTCAAGCCAAAA            GAGCAGATA TTA TATCTGCTC            TTCATCTTGGCCAAA 100 14
 LT978_10480 2106816 .. 2106848 -  -7.7  -5.40004   GACTAAATGAAAAAA     CCCCTGCTC-TCCC TTTTTT GGGACGAACGGGGG      TTTTTTGTTATTGAA 100 33
       spoVK 2104747 .. 2104775 -  -9.6  -5.76237   GAGAGAAATAAAAAA        GAGACCCCTCAG ACCGG CTGAGAGGTCTA        TTCGTGAGCTGCCGC 100 23
        hflX NONE
 LT978_10460 2102072 .. 2102084 -  -4.9  -3.11178   TAAGGAATCTTAACA                TCAAA TTC TTTGA                AAATTGCAAACGCCC  52 40
 LT978_10455 2101565 .. 2101577 -  -3.4  -2.98356   AGGTAAATGTATATA                GCAA AACAG TTGC                TAACGGATTAATGAA  45 33
        glnA 2100158 .. 2100184 - -11.6   -5.2696   CCAAAACTTAAAAAA         TCCCCTGACACC AAT AGTGCCAAGGGA         TTGAGAGATTAATAC 100 34
 LT978_10440 NONE
        xynB 2095044 .. 2095056 -  -2.7  -3.51924   TTCCCACCTAGACAA                TAGCT ATG AACTA                TTACCATCTTTCTTA  49 275
        xylA 2092292 .. 2092325 -  -9.7  -3.53563   AGATCCCCGTTGAAA     TGACCCGCCATAACAG TAA CT-TCATGACGGGCCA     TTCCGGGAACTTGGC  79 88
        xylB 2090436 .. 2090461 -  -9.8  -5.64873   CTCAATAATAAAAAA         CATCCCC-CAC GCAAT GTGAGGGGATG         TTTTGTGTGTATACT 100 317
        ppsA 2087495 .. 2087521 -  -3.7  -5.71712   TTTCACATAAAAAAA        CCGGATTCCTCT TCTA AAAGGT-TCCGG         CTTTTCTTTTTGTTC  89 95
 LT978_10400 2085385 .. 2085399 -  -4.2  -3.60906   AAGTAAACGAAAAAT               GATCCC TTT GGTATC               CCTCAGTTCTTTATC  55 133
 LT978_10395 2083995 .. 2084022 -  -7.9  -5.67063   GTGATTATAAAAAAA        GATATATGACA GCAGAT TGTCATACATC         TTTATAAATTTTCAT 100 17
 LT978_10390 2083307 .. 2083331 -   -10  -3.27298   CTTCCTAATCATTAA          GGCTGCCG GGAATGATA CGGCAGCC          TTTGATCTCTATTCT  78 144
 LT978_10380 2081168 .. 2081181 -  -3.1  -3.33744   TTGTTCTTGAAAAAG               TTGAG TATA CCCAA                ATGTACCCCTCCATT  48 58
 LT978_10375 NONE
 LT978_10370 NONE
 LT978_10365 2079106 .. 2079124 -  -3.2  -3.10175   ACCTTTGAAAAGAAC             TTCTTC GTTTGTT GAAGAA             CTTATCACAATCTAT  46 182
 LT978_10360 2078465 .. 2078479 -   -10  -5.88197   CTAAATACAAAAAAA               CCTGCT TTC AGCAGG               TTTTTTTCGGTAAAG 100 67
 LT978_10355 2077224 .. 2077246 -    -7  -3.69395   CGGACTAGGCAAGAA           CAAAGCCG GCACAAG CGGCTTCG           AATTCATGTGTTCGT  67 45
 LT978_10350 NONE
 LT978_10345 2075090 .. 2075116 -  -8.1   -5.1166   CATTAAAACTAAAAA        GATCGGCCG-AT GAAC ATGCAGCCGATC         AGTAATTCATAGATT  91 39
 LT978_10320 2069659 .. 2069676 -  -9.9  -5.93809   TCTCCATAAAAAAAA             GACTGCT GTTA AGCAGTC              TTTTTTCGTTTTATT 100 36
 LT978_10315 2068578 .. 2068589 -    -3  -4.36914   GCCCCGCCGACAAAA                TAAG CGTG CTTA                 TTAATAATTGTCACT  60 26
 LT978_10310 NONE
 LT978_10305 2067491 .. 2067506 - -10.4  -5.41787   GAAAAAACATAAAAA              GGAGGC AATC GCCTCC               TTCTCTTTTTACTTT 100 34
 LT978_10295 2066440 .. 2066457 -  -4.8  -5.77988   ATAGATATAAAAAAA             CCCGCT GCCTTT AGCGAG              TATCTATTTTCAATC  93 35
        yneA NONE
 LT978_10280 2064310 .. 2064322 -  -4.7  -3.94823   TAGAAATCATAATAA                GCTCC TTT GGTGC                GTGTTGATTATATAC  61 76
 LT978_10275 2064044 .. 2064063 -  -6.5  -5.24989   GTATATACGAAAAAA            GAATACG TATTGC CGTATTC             TTTCTGTTTAGTGAA  88 33
         tkt 2061869 .. 2061890 -  -8.8  -4.96106   CATAAACAGGAAAAA           GAGGATGA TTTGAC TCATCCTC            TTTTGTCTCGTTATT  91 36
        sirA NONE
 LT978_10260 2060934 .. 2060958 - -10.2  -4.16681   AACATGACGCCAAAA          TAAAAAACCC TCTCC GGGTTTTTTA          TTTTTATAACCATGT  85 66
 LT978_10250 2059839 .. 2059849 -  -3.2  -3.27786   TTCAAAAGTTATTAA                 TCCG TTA CAGA                 CCCGTAAATCCTCCG  48 19
 LT978_10245 2059386 .. 2059405 -  -2.8   -4.2237   AAACCAATTTGAAAA            GAGAACAC GTTT ACGTTCCC             GTTACCCGGCCTACG  58 16
 LT978_10240 2058802 .. 2058822 - -11.2  -5.63517   TGCTCAAATAAAAAA            CCTTTCCG GCGGA CGGAAAGG            TTTTAATTCATCTGA 100 28
        acnA 2054351 .. 2054375 - -15.9  -4.82901   CCTCCCGCATAAAAA          GAGAGAAAGCA GAC TGCTTTCTCTC          CTTTGTTCATTCTGC 100 40
 LT978_10210 2053811 .. 2053833 -  -6.3  -5.88565   TTTACAATAAAAAAA           CTGAACCTC TATTT GAGATCCAG           TTTTTCTTTCATTTC 100 11
 LT978_10205 NONE
 LT978_10200 NONE
         tlp 2053118 .. 2053131 -  -8.1  -5.88197   GGAAAGAGAAAAAAA               CCAGG TTTC CCTGG                TTTTTATTATGATTG 100 32
 LT978_10190 NONE
 LT978_10185 2052295 .. 2052313 -  -8.9  -5.42259   TTACGTGTAAAAAAA             GAACGCA GCGGA TGCGTTC             TTTTTTTTACAGCCT 100 32
 LT978_10170 2050730 .. 2050761 -   -11   -5.4505   TCTTTCAATAAAAAA      GCAAAAACCCCTGA TTTG CCAAGGATTTTTGC       CTTTTTTGTTCCTAT 100 37
        parE 2048362 .. 2048384 -  -3.4   -3.8901   CGGTAAATCATGAAA           TAATTCTGGC TGT GCCACTATTA           AACCTCCTCAGCGAC  55 23
        parC 2045909 .. 2045939 -   -17  -2.70419   ATGAAAGCTAAATAG       TAAAACCTCCGCTC AAT GAGCGGAGGTTTTT       TATTTTATTTTTACT 100 42
 LT978_10150 2043555 .. 2043578 -  -8.9  -5.36441   TTTTCACATAAAAAA          CCCCTCACA ACAAAA TGTAAGGGG           TTTTTTGAAAATTGT 100 53
 LT978_10145 NONE
 LT978_10140 NONE
 LT978_10135 NONE
        uxuA NONE
 LT978_10125 2038794 .. 2038821 -    -5  -3.44051   TTTTCACTAGTATAA        GTCAGA-AGTAAA TAG TTTACAATCTGAC        AGGGAACTGGATTCT  56 42
 LT978_10120 2037749 .. 2037760 -  -7.2  -3.93288   GTTTATGTAATGAAA                CCGG TTAT CCGG                 ATTGCCTTGCCAGAA  72 18
 LT978_10115 2036371 .. 2036397 -  -5.8  -4.51174   GCAGGAGAACGAAAA         GGCCATCCCG TTATCGG CAGGACAGCC         TCAGTGGCTTTGATG  72 43
 LT978_10110 NONE
 LT978_10105 NONE
 LT978_10100 2033222 .. 2033242 - -10.4  -4.95155   TGTAGATGAGAAAAA            GCCGCCTG ATGAA CAGACGGC            TCTGCAGCTTGTTAT  93 37
 LT978_10090 NONE
 LT978_10085 2031837 .. 2031879 -  -5.7  -4.41895   AATCTTTAATGAAAA TTCCGTCTCGTTATCTTAAG TATA CTTA-GTTGATGAGACGGAA TTAAAAAATAGGATG  69 63
 LT978_10070 2028355 .. 2028381 -  -8.8  -6.02914   GCTATACAAAAAAAA         CGGTTCTGCT GATTAAT AACAGAACCG         TTTTTTCCTATTGTT 100 33
 LT978_09975 NONE
        galU 1973361 .. 1973380 -  -2.2  -2.56864   TTGACAAGCAAAATG            GTTACAAA TTAT TTTTTAAC             GCACGATTTCTTCAG  40 21
 LT978_09965 1972667 .. 1972705 -   -11  -6.02919   GTATAAATAAAAAAA   GACTGCATAGATCCGGCT CGC AGCCGTTCTTATGCAGTC   TTTTTTCACAGTCTT 100 31
 LT978_09875 1919755 .. 1919773 - -13.2  -4.67943   CGGCAAGACAGAAAA             CCCCTTGT TAT ACAAGGGG             TTTTTGAGTTGAATA 100 103
         ggt 1916437 .. 1916475 -   -17  -4.32579   ACAGTGCAGAATAAA   CAAAAGCCTCATTTCTCA GCT TGAGAAACGAGGCTTTTT   GCCTAGTTATTTTTT 100 32
 LT978_09830 1912495 .. 1912514 - -12.2  -3.29874   TTAAAAACAAATAAG            GGAACGGA CGGG TCCGTTCC             TTTTTTAGACATCTA  89 30
 LT978_09815 1904833 .. 1904860 -  -6.3  -5.02231   TAAAAATATGAAAAA        GCCCGAGGCTTC GTTTT GAAGC-TCGGGT        TTGTTTTTTATTGAT  80 33
 LT978_09790 1900815 .. 1900826 -  -2.2  -4.72986   TAGTGTCATCAAAAA                CGTC GGAT GACA                 TGCAGGCTCATAAAC  64 33
 LT978_09785 1899981 .. 1900002 - -11.5  -2.73875   CGCTTCTTAATAGCA           GCGCCCCGA AAAT TCGGGGCGT            TTTTTTACGGCTGAT  81 30
 LT978_09765 1893485 .. 1893507 - -13.5   -3.3907   GCAAATCTTAATGAA           CGGGAAGAG AAAAA CTCTTCCCG           CTTTTCATAGCAGCT 100 302
 LT978_09755 NONE
 LT978_09750 1892175 .. 1892191 - -10.9  -4.90302   GATTAATAAAAGAAA              GCTCTCT TTT AGAGAGC              TTTTTTCAGATTTTC  93 39
 LT978_09740 1890050 .. 1890077 -  -2.9  -2.63079   GGCTTACACAATTCA       GCTCATCGCTATA TGAA TATAGC-ATG-GC        CGGTGTGGAAATGCA  41 487
 LT978_09715 1886723 .. 1886747 -  -9.4   -5.1861   GGCACGATTAAAAAA         CATCCCTG-CT TTTT AGACAGGGATG          TCAGCCGTACTGACT 100 26
 LT978_09705 1885470 .. 1885486 -  -9.3  -5.88471   TATTATTAAAAAAAA              GCCGTGC TCT GCGCGGC              TTTTTTCTATTGATG 100 68
 LT978_09690 1883250 .. 1883292 -  -8.7  -6.02914   CGGATACAAAAAAAA CCCTCCTTAA-ATGGTTTAA TCTA TTACACCATATTAACGAGGG TTTATCTATCATTTT 100 41
 LT978_09685 1882238 .. 1882257 -  -6.4  -5.45802   GCGTCAAAATAAAAA            GACGGG GCGGTTTT CCCGTC             TTTATGTATTAATGC  89 34
 LT978_09645 1875858 .. 1875872 -  -3.6  -3.75024   TTTGATGATGAACAA               CTGAAA TCA TTTCAA               AATGGCCATTCTCAT  53 390
 LT978_09635 NONE
 LT978_09630 1875164 .. 1875187 -   -11  -4.62051   AAATATCACATAAAA          GCCATCCGAA TGCA TGCGGATGGC           CTTTTTATTATATAA  90 33
 LT978_09610 1872400 .. 1872424 -   -13  -4.80453   GCATGACAAAAGAAA          GAAACTGCTG ACAGG CAGCAGTTTC          TTGTTTGATTTAATC 100 35
 LT978_09605 NONE
 LT978_09600 1869585 .. 1869607 - -16.3  -3.13368   AGACCAAAAGAAGCA           GGCCCCCGT TCAAG ACGGGGGCC           TTTTTTAATAAAGCG 100 30
 LT978_09590 1866990 .. 1867001 -  -7.2  -5.47218   GGGGATGTAAAAAAA                GCGC TTTT GCGC                 CTGTTTCGTGATCTG  93 86
 LT978_09540 NONE
 LT978_09535 1852272 .. 1852303 - -11.7  -4.48877   GAAAGACTGATAAAA      GAAGGGATAAGGC TGAAAT GCCTTATCCCTTT       TTTTGTGTCAGGTCG 100 16
 LT978_09510 1849406 .. 1849426 - -10.3  -5.68438   TTATTAAAGAAAAAA            CGGCCTGCA TCG CGCGGGCCG            TTTTTTTATCTTAAA 100 31
 LT978_09500 NONE
 LT978_09495 1848107 .. 1848131 - -17.3  -3.73088   ACATGTGATGAATAA          TAAAGGCTGCC CAA GGCAGCCTTTA          CTTAATGATAATGTT 100 40
 LT978_09485 1846988 .. 1847015 - -14.2    -5.252   GATTCCTATAAAAAA        CCCTTAGTCTGC TTAA GCGGACTAAGGG         TTTCTTTCATCTTAC 100 37
 LT978_09470 NONE
 LT978_09465 1843531 .. 1843587 - -16.8  -2.94924   TCGCCACCTACAAAT GGCAC-AAAAAGTAAAAAGCCGGCACA TCGA TGTGCCGGCTTTTTTCTGTTAAGCGCC TTTTTGGTTCAGTTT 100 17
 LT978_09450 1839452 .. 1839480 - -10.3    -4.946   ATGAAATAGTAAAAA        CACCCGATGCG TCGCTCG CGCATGGGGTG        TTTTTGGTTTGCGAA  93 50
 LT978_09440 NONE
 LT978_09435 1836813 .. 1836838 -  -7.6   -3.8917   GTGTAATGAGAAGAA         GCCCGCTT GAAAAATAGA AAGCGGGC          TTTCTTTATTACCAG  74 34
 LT978_09420 1834888 .. 1834918 - -17.7  -3.09327   CCAGCCGAGGTAAGA      CGG-AGCCGGCTGA AGAT TCAGCCGGCTTCCG       TATTGTCTGGGAAAG 100 47
 LT978_09400 1832965 .. 1832975 -  -5.4  -3.70438   AAAGGACTACGGAAA                 GGAA TTA TTCC                 GAGTTATCGGTCACA  59 435
 LT978_09320 NONE
 LT978_09315 1819980 .. 1819997 -  -9.9  -5.34055   ATAAACATGAAAAAA             GCAGCTT ATCC AAGCTGC              TTTTTGATGTGAAGA 100 46
 LT978_09305 NONE
 LT978_09285 1816684 .. 1816700 -  -3.5  -4.72201   TGTGATAAAAAATAA              CCCTGTC TTA GGCGGGG              GATTATTACATGCTG  67 31
 LT978_09280 1815483 .. 1815516 -  -9.7  -4.43477   CTTACCTAATTAAAA     CAAAAGAGTGAAGGT TGTA AGCCTCACTCTCTTG      TTTTTAATGTATAGT  89 40
 LT978_09275 1814852 .. 1814876 -  -9.4  -3.90112   GGGGTTTTAATTAAA          TAAAGCAGAC ATTAA GCCTGCTTTA          TCTTTTTGAACATTA  81 84
 LT978_09265 1813607 .. 1813622 -  -6.8  -5.50925   AACGAATACAAAAAA              GCCCCA CGAA TGGAGC               TGCTATATACGTATT  90 39
 LT978_09260 1812038 .. 1812061 -  -7.5  -5.47218   GGTTAGCTAAAAAAA          GGCAAAGAG TCAACG CTCTTTACC           ATCAGGTGTTTTCCT 100 11
 LT978_09250 NONE
 LT978_09245 1809636 .. 1809654 -  -8.1  -5.69473   CAGATCATAAAAAAA             CACCCCC TATGC GGGAGTG             CCAAAACATTTATGC 100 35
 LT978_09240 1808272 .. 1808292 -  -8.3  -4.23528   TAATTTAAAATTAAA            GCCCCTT ATTCAGG AAGGGGC            TTTTGCTTTGCAACT  82 53
 LT978_09170 1799228 .. 1799248 - -13.3  -2.78725   AGAGCTCAGCAATGA            GGCCTGCCT ATC AGACAGGCC            TTTTTTCTATGTTTT  93 32
 LT978_09155 1797657 .. 1797680 -  -5.3  -5.93809   TTTTCATAAAAAAAA          CACAGATCC TTTCAG GGATTTGTG           TTTTTTTGTGTCAGC 100 36
 LT978_09125 NONE
 LT978_09120 1792074 .. 1792100 - -10.9  -5.60993   CCGTGCATAAAAAAA         GCACAGTCTCT ATACG AGAGGCTGTGC         TTTTTTATTTCAGAT 100 35
        metA 1782233 .. 1782245 -  -3.3   -4.0342   TGTAATCAACAACAA                GCAAG CTT CATGC                ATCGTAAGGAGTTAT  55 207
 LT978_09060 1781032 .. 1781052 - -14.1  -5.86609   GGAAAAAAACAAAAA            GCACACGAA TCG TTCGTGTGC            TTTTCTTTTACGATA 100 33
        cspD 1780586 .. 1780605 - -13.6   -3.5486   GACGGCAATCAAATA            GGAGAGGC ATAC GCCTCTCC             TCTATTTGTCATCTG 100 58
 LT978_09040 1779963 .. 1779987 - -15.9  -5.59655   CAAATCAATAAAAAA          TAAAACCGCAG CTT CTGCGGTTTTA          TTTTTCGAATTCATC 100 23
 LT978_09025 NONE
 LT978_09020 1777925 .. 1777939 -  -2.8  -3.77831   GGATGAACAGTGAAA               CGCAAT TTC ATTCCG               GTTATTTATTCAGCC  51 27
        sspL 1777732 .. 1777771 - -12.2  -3.06837   AGAATGCTCGAAAAG  CTGAACGCCAGAGAGATC AGCT GATCCCTCTAGCGTTTTG   TATTGCTTTTTTTTG  87 15
 LT978_08975 1769528 .. 1769555 - -14.4  -3.31054   AAATAAGATCAGGAA        GCAGATGATTTT CTCG AAAATCATCTGC         TCTTGCGAAATGAGG 100 385
 LT978_08965 1769021 .. 1769033 - -10.5  -5.72207   GTGAAACTAAAAAAA                GGGGC AAA GCCCC                CTTATATTAGCAGCT 100 84
 LT978_08950 1766335 .. 1766352 -    -7  -5.79588   CTAAAACGAAAAAAA             CCCTTG ATGTGA CAAGGG              TTCAAGAGGGTTAGT 100 432
 LT978_08920 1759951 .. 1759971 - -15.5  -3.12005   GATATAATTTTAACA            GGCTGTCGA TAT TCGACAGCC            TGTAAGCATCTTTAC 100 55
 LT978_08865 1751184 .. 1751209 - -13.5  -5.27938   ATCTTCAAATAAAAA         GCATGAATGAT ATCC ATCATTCATGC          TTATTTTTTAGGGAA 100 26
 LT978_08855 1750327 .. 1750352 - -13.3  -4.82855   GATGAAATTGAAAAA         GAAGGCAGCTG AAAA CGGCTGCCTTC          TTTTATATAAAGGGG 100 50
 LT978_08840 1749330 .. 1749358 - -11.8  -5.09521   TGAAGAAATGAAAAA        GCCCGAAACC GTTCGCTGG GGTTTCGGGC        TGCTGATGTGTTACG 100 36
        recU NONE
 LT978_08825 1744857 .. 1744881 -   -13  -5.52384   TTTGTATGAAAAAAA          TCCTTCACCT GTTTG AGGTGAAGGA          TTTCGTCCGCTAATG 100 35
 LT978_08730 1727561 .. 1727576 - -11.8  -3.96696   AACACGAACAGTAAA              GGCGGC TTTT GCCGCC               TTTTTATTATCGTCT  90 32
 LT978_08550 1695440 .. 1695459 - -13.6  -4.17657   CAGCAGACGTTAAAA            GGCATGCG AACC CGCATGCC             TTTCTCTGTTTTTTA 100 38
 LT978_08460 1679010 .. 1679041 - -19.6  -5.42259   TGATCGGCAAAAAAA      TAAGACTCCGGCCG ATAA CAGCCGGAGTCTTA       TTCAGGACGAAAAAG 100 64
        serA 1676267 .. 1676290 - -12.6  -5.58209   TTAAACGTAAAAAAA          CCCAAAACAT ATGA ATGTTTTGGG           TTTTCTGTTGGTTAC 100 37
 LT978_08375 1662937 .. 1662949 -  -3.3  -3.08046   CTTTTATGCTAAAAC                CAGTG TAC CACAG                CGCTTTGAAAAGGAA  46 74
 LT978_08370 1662376 .. 1662399 - -11.8  -5.03994   TTTGATATAGAAAAA          GCAG-GGCTGA CCG TCAGCCTCTGC          TTTTTTTTCTTCTCT 100 15
 LT978_08320 1654443 .. 1654469 -  -9.5  -5.82036   ACAATAAATAAAAAA        GAGACCGGAACA ATGG CGT-CCGGTCTC         TTTTTGCGTTCAGCT 100 35
 LT978_08195 1633457 .. 1633471 - -12.8  -5.40072   GCGGCCCGAAAAAAA               GCCGCG TGC CGCGGC               CGCCGTATATTCATC 100 269
 LT978_08180 NONE
 LT978_08175 1630772 .. 1630793 - -10.1  -4.74787   ACAAATATAAATAAA           CCGGCATCT GACA AGGTGCCGG            TTTTATTGTTTAAGA  91 35
 LT978_08165 1629477 .. 1629504 -   -10  -3.62096   TTTTATGACGGGAAA        GCGAAAGAAC CAGCATAC GTTCTTTCGC         TTTTTTACGTTTGCG  80 30
 LT978_08135 NONE
 LT978_08130 NONE
 LT978_08125 NONE
 LT978_08120 NONE
 LT978_08115 1623465 .. 1623475 -  -4.6   -2.8805   ATTACGCCGTATACA                 CGGA GGA CCCG                 GATCGGATAAAGGTG  47 69
        proC 1617704 .. 1617722 -   -11   -5.3671   AACAGAATGAAAAAA             GCATGGGA TGC CCCCATGC             TTTATGACTGGTCCG 100 27
        loaP 1546884 .. 1546909 - -11.9  -2.74094   GTTTATATAAAAAGG         GCATCAACGGC ACAT GCTGTTGATGC          TTTTTTTGAAATGCT  86 39
 LT978_07995 1545174 .. 1545191 -  -6.3  -4.06678   ATTCAGTCATATAAA             CTGCTCA CAAC TGAACAG              ATCGTTCTTATTGTT  68 266
        namA 1544052 .. 1544085 -  -9.5  -6.20267   CGAAAAATAAAAAAA     GAGACAGCCGGGATC GAAA AACTCCGGCTGTCAC      TTCATCACCATGCTC 100 30
         zwf 1540275 .. 1540302 - -15.6   -4.8048   TTCTGATATTAAAAA        CCGCGG-GCCGTC ATG AACGGCGCCGCGG        TTTTTAAATTTTTTC 100 41
 LT978_07955 NONE
        yidC 1536206 .. 1536230 - -17.2  -5.62045   AGATACAAGAAAAAA          CCCTGCCGGA TAGGT TCCGGCAGGG          TTTCAGTATTATGAT 100 34
      prli42 1532808 .. 1532820 -  -2.6  -3.08438   GAGGACATTGCAATA                GAGC GGAAA GCCC                TCATAAAAAAGCAGG  43 71
 LT978_07895 1527223 .. 1527249 - -15.3  -5.86061   GTCTATTAAAAAAAA         CTCCTTTTGCC CGGGC GGCAAAAGGAG         CTTTTTTATTTTCAT 100 37
 LT978_07850 1516765 .. 1516782 -    -7  -4.68593   CGGACGACTGAAAAA             GCCCTT TTTTGC AAGGGC              TTTTTTTACAGCTTT  79 31
 LT978_07795 1506387 .. 1506406 -  -7.8   -5.0916   TTTTCAACACAAAAA            GGGCGCTT TTTT AAGCGCCT             TTACTTTTTTTTCAG  89 26
 LT978_07790 NONE
 LT978_07785 1504740 .. 1504757 -  -9.1  -5.63103   TGTGAATCAAAAAAA             CTACCGG ACAT CCGGCAG              TTTTTTAGTCTACTT 100 35
 LT978_07780 1504389 .. 1504408 - -13.6  -4.45259   AAACGGCAAAAAGAA            TCCGGCTG CTGC CAGCCGGA             AAGGGAGGGAAATAC 100 46
 LT978_07775 1504074 .. 1504090 -  -9.3  -3.18912   TTATTTATGCAGTAA              GGGCAGC ATG GCGGCCC              TTACAATGACTTTAC  74 26
         alr 1502396 .. 1502422 -    -8  -5.04385   GACATCGCCAAAAAA         TTCAACACGACC GCA AGCCGTGTAGAA         CGGGCCATCCGCCAC  90 338
 LT978_07635 NONE
 LT978_07630 1478561 .. 1478579 -  -8.9  -5.79526   ACACCGCAAAAAAAA             CTAGCTC TCATT GAGCTAG             GAAAAAGCAGAACAG 100 66
 LT978_07610 1475658 .. 1475683 -  -8.4    -5.626   CACGGTATAAAAAAA         GAGCT-TCCGT ATAAA ACGGACAGCTC         TTTTTTCATGATTAG 100 37
 LT978_07590 NONE
 LT978_07585 1468769 .. 1468788 -  -2.1  -3.73859   TATTATAATATAGAA            TTTCCAG AAAAAA CGGGAAA             GGTGTCGAATGGATA  50 45
 LT978_07580 NONE
        sinR 1468064 .. 1468097 -  -8.2   -4.2349   GTCGGACAGTTAAAA     GAGGAGTTGTG-CAC ATATG GCGGCACTACTCCTC     TTTTTGCGCTTTTCT  82 17
 LT978_07555 1465353 .. 1465375 - -13.4    -3.889   GCGAATCACACGAAA           GGTCCTCCTG TAT CAGGAGGGCC           TTATTGGTATTCCTC 100 26
 LT978_07505 1458561 .. 1458600 -  -9.2  -4.98436   TTAAGATGATAAAAA  GCTGAATGGCCGGGAGGG ATTT CTCCCTCAGCTATTCAGC   TTTGTCAGCTTCAAT  91 17
 LT978_07495 1457527 .. 1457563 - -11.7  -5.16133   ATCATAAGAGAAAAA    CGAAGATCCGCTGATCA AAT TTATCAGCTAATCTTCG    TTTTTTGCGGTTGCG 100 40
 LT978_07485 1456625 .. 1456646 - -10.9  -5.37593   CTGTAAATGAAAAAA           GACAGACCA TAAT CGGTCTGTC            TTTTTCTGTTCAGTG 100 35
 LT978_07475 1455621 .. 1455649 - -14.7   -5.5112   TGCAGCAATAAAAAA        TAAGCCTGTATCC ATT GGATACAGGCTTT        TAATGTGCAGTCGGA 100 25
        nhaC 1450168 .. 1450199 - -14.6  -3.29144   GGATTTTTTGCATAA      GAAAACCTGCCG GAAAAAAA CGGCAGGTTTTC       TCGTATTGTCAGCTT 100 34
 LT978_07425 NONE
 LT978_07420 1447851 .. 1447875 - -11.3  -5.52384   TTCGGATGAAAAAAA          CGGGCCCGGCC ATT AACCGGGTCCG          TTTTATATGTCTATT 100 93
 LT978_07370 1437449 .. 1437471 -  -8.4  -5.31275   GTTCATGACAAAAAA           GAAGACCGCC GGG GGCAGTCTTT           GTTACACAGCTGTTT 100 27
 LT978_07365 1437072 .. 1437082 -  -2.6  -4.35604   CGAACTGACAAGAAA                 TTAA CGT TTAA                 TTGCGGTAGACGGGG  58 22
        ispG 1435811 .. 1435833 -   -12  -5.55698   CACAACGCAAAAAAA           GCTTGGCGGA ATA TCCGTCAAGC           TTTTTGTGTTTCTTG 100 20
 LT978_07350 1434676 .. 1434696 -    -9  -5.24129   CGTGCCGATAAAAAA            CCTCCTGC TATAT ACAGGAGG            TTTTTTTCAGCTTTT 100 32
 LT978_07335 1432859 .. 1432878 - -10.7  -5.46657   CAGCTCAATAAAAAA            GGAGGGG GAATTG CCCCTCC             TTTTTTACCCCGAGA 100 30
 LT978_07320 1429697 .. 1429712 -  -6.1  -5.10767   GAGGCAATATAAAAA              GCCGT AGTTAA ACGGC               TCAAATCTTGCATTC  80 86
 LT978_07315 1428691 .. 1428709 - -14.6  -5.60993   CTTCTTATAAAAAAA             CTGAGGCC CCG GGCCTCAG             TTTTTTATTTTTACT 100 22
 LT978_07185 1404581 .. 1404600 -  -4.9  -5.80248   TAACAGATAAAAAAA            CCGGTGC CTTCCC GCATCGG             TTTTTTTACGGTTTC  93 31
        rpsT 1390151 .. 1390171 -    -9  -5.64006   ACTGAATGAAAAAAA            CGATCCCC GTTAA AGGGATCG            TTTTTGTATTATGCA 100 34
 LT978_07105 1388722 .. 1388742 -  -6.8  -5.37865   GCAAGAAGTAAAAAA            GACTGCCG ATTGA CAGCAGCC            CGGAATGCGGCTAAG  89 36
       comER 1384173 .. 1384195 -  -7.8  -5.00138   CAGGCAAACCAAAAA           CCATCGTT TAAACGG AACGATGG           TTTTTAAAATGCATT  86 82
 LT978_07040 1378565 .. 1378583 -  -7.4  -3.53091   AGCCGTCCTCTTAAA             CACCTCTA TTT TAGGGGTG             TTTTTTGTTGAAAGT  66 122
 LT978_07025 1375906 .. 1375943 -  -9.2  -2.96274   GTTCTCAGAATGAGA   GGAGC-CGTACCGCC GGAATAGGA GGCGGTACGCGCTTC   ATTTTTTCGTTGTTT  73 24
        sigK 1373197 .. 1373216 -  -4.3  -4.97402   TAAAATGCAGAAAAA            GCCGGGAT GTCAG AT-CCGGC            TTTTCGCTCACTTTC  73 33
 LT978_07010 NONE
 LT978_07005 1371161 .. 1371175 -  -5.7  -2.90075   GCTTGTTCAATTAGA               GGAAG TGATT CTTCC               TTAAGGGAGATCACT  53 338
 LT978_07000 1369898 .. 1369918 - -11.9   -3.6269   TTAGTGACATAAAGA            GGAAGGGAT AAG ACCCCTTCC            TTAAAACCTTTAATT  90 56
 LT978_06910 1351933 .. 1351956 - -15.4  -4.14392   CTGTAATCTTCAAAA          CCCTTCTCTG GCAG CAGAGAAGGG           TTTTTCATCACTTTT 100 78
 LT978_06875 1342695 .. 1342705 -  -3.2  -3.15324   CAGGCGTATGAAAAG                 GTGC ATA ACAC                 TGATTCAAAAGTTTC  46 257
        fdhF NONE
 LT978_06830 1332029 .. 1332050 - -13.1  -6.22691   GAAGAATAAAAAAAA           GCCATTGTC TTTT GACAATGGC            TTTTTCATTTCTTAT 100 37
 LT978_06800 1327807 .. 1327851 - -13.2  -4.26189   GTAGAAACGTTAAAA TAACCGCAAAAAAGCAGCTGA TTAT TCAGCTGCTTTTTT-CTGTCA TACGTCAGCTGAAAA 100 23
 LT978_06730 NONE
 LT978_06725 1312698 .. 1312726 -   -14  -4.37886   TCACTCCTTATAAAA       CG-GGGATGAGCA TGCA TGCTCATCCCGCG        GTCCGTCCTATTTTG 100 33
 LT978_06720 NONE
 LT978_06715 1311327 .. 1311348 - -11.7  -5.09426   TTTAAGCGGAAAAAA           GGATACTTC TCCG GAAGTATCC            TTTTTACGTTTGTCT 100 29
 LT978_06670 1303022 .. 1303043 -  -6.6  -5.67529   AAGTAAAAAGAAAAA           CAGCCTTC TTCAGG AAAGGCTG            TTTTTTTATTTGAAT 100 70
 LT978_06640 1296610 .. 1296625 - -10.4  -5.72254   CTAAACAATAAAAAA              GCTGCC GTTC GGCAGC               TTTTTTTTTTATGAT 100 34
       spoVB 1285401 .. 1285435 -  -3.7    -4.855   CAAAAAGAAAAACAA    TAAGGATAAGCAGATG GAAA CATC-GCTTATCGTTG     ACGGGGTCATTCAGA  73 200
 LT978_06585 1284368 .. 1284384 - -12.3  -5.77988   ATACATACAAAAAAA              GAGCGGA GAA TCCGCTC              TTTTTTTATTACGCT 100 34
 LT978_06520 NONE
 LT978_06515 1271590 .. 1271606 -  -5.8  -5.71712   TTCGATATAAAAAAA             GCTCCCC TTCA GGGG-GC              TTTTTTTTAATCTTT 100 32
 LT978_06410 1252939 .. 1252963 -  -7.1  -4.30559   AATAAAAGCGGAAAA          CGAGTCCTCTT CAT AACGGGACTCG          TTTTTTTATATCCAT  76 31
 LT978_06365 1242902 .. 1242924 - -16.4   -4.8622   GCCGGTAATGAAAAA           CCCAAAACGC AGT GCGTTTTGGG           TTTTATCGTATAGTT 100 28
 LT978_06295 1224184 .. 1224210 -    -8  -5.28176   GGGACGTATAAAAAA         CCTCAAGCCC TGACAAT GGGTTTGAGG         TTTTTTTGTATTTTA 100 465
 LT978_06220 1214386 .. 1214408 -  -9.9  -4.66163   ACGGGCAGGCAAAAA          GGCGG-GACT TTTG AGTCACCGCC           TTTTTCAATTATACA  89 34
 LT978_06170 1202932 .. 1202956 - -12.9   -5.1615   TTAATACTGAAAAAA          GGCTGCCGA ACTCAAA TCGGCAGCC          TTTTTTATTGAGAAT 100 30
        rnhC 1196302 .. 1196323 - -13.1  -5.40464   GAGGATAAAGAAAAA           GCTTGCAGA TCAT TCTGCAAGC            TTTTTTTATTATGAC 100 34
        sspI 1191361 .. 1191380 - -10.7   -6.0427   ATTATACAAAAAAAA            CCGGGTG TGCCAT CACCCGG             TTCATGCTTATTGCG 100 33
 LT978_06115 1190170 .. 1190197 -    -5  -3.45817   CCCTGATAAGAAAAG        CGTTTTCATTTA ATTG TAAAGAAAAACG         ATTCCGCACACTATG  56 69
        glcD NONE
 LT978_06105 1187373 .. 1187397 - -10.8   -4.4891   TGCAGCATCATAAAA         GCAGAGAG-CC GATC GGTCTCTCTGC          TTTCGGCTTATGACA  90 33
 LT978_06040 1171963 .. 1171987 - -11.4   -5.8096   TATAAAAAATAAAAA          GCAGGAGAGC TTATC GCTCGCCTGC          TTTTTTCGCTTTTTT 100 11
 LT978_05995 1165361 .. 1165381 -  -6.8  -5.56264   CGGAAATACAAAAAA            CCCCGTTC ATTCA GAATGGGG            TTTTTTTGCGTATAA  90 43
 LT978_05945 NONE
 LT978_05940 1153697 .. 1153720 - -16.8  -4.55295   CTGGGCATAAACAAA          CACCGTTCGG AAAG CCGAACGGTG           TTTTTCTGGTTAAAA 100 35
 LT978_05890 1141715 .. 1141729 -  -5.7  -4.21303   AAAAAGAAGCAGAAA               TCGAG CCCTT CTCGA               GATGAGGAGGGTTTT  68 62
        ytvI 1139093 .. 1139117 -  -5.6  -5.68438   TTATCAAATAAAAAA          CGGCAGCCTT CTTAC AGGGCTGCTG          TTTTTATTTGGATTG  95 29
 LT978_05830 NONE
 LT978_05825 1127784 .. 1127797 -  -3.1  -3.38674   AAAATTTTTAAAAAT               GACAT AATT ACGTC                GCAAAAGAAATATGA  49 19
 LT978_05820 1127476 .. 1127489 -  -8.1  -2.96822   TAACGAACACAAGTA               GAGGG GAGA CCCTC                TTTCTTAGTGTTCAT  67 30
 LT978_05810 1125647 .. 1125663 -  -6.6  -3.96624   GACGGGCATCACAAA              CTGATC GGAAT GATCAG              CCGCCAGGATGTCTT  68 478
 LT978_05740 1112512 .. 1112537 - -15.5  -4.80882   ATCGTATATGAAAAA         GAGGACAGGCA GTGA TGCCCGTCCTC          TTTTTTTATGATAAA 100 31
        brnQ 1104884 .. 1104912 - -12.6  -4.32482   ACGCACAAGCCAAAA       CTGCACC-CTGAT GGAA ATCAGAGGTGCAG        TTTTTTTGTTTCTCA 100 95
        hisJ 1101789 .. 1101811 -  -9.1  -3.06737   TATGAACGGTGAAGA           CGCGCAGGA ACGCA TCCTGCGGG           TGGTTTTCGATATTT  66 383
 LT978_05690 1100918 .. 1100942 - -13.6  -5.39721   CGACGACATAAAAAA         GGAG-CCGGCC TGCC GGCCGGGCTCC          TTTTTTTATCCTAAT 100 31
        rpsD 1098206 .. 1098239 - -12.5  -5.46706   AGCCCAAAAGAAAAA     CCCCGGAAACATTGT CATC ACAACATGTCCGGGG      TTTAATCCAATGCTC 100 58
 LT978_05675 1096540 .. 1096556 - -12.3  -4.88736   GAGGATTTATAAAAA              GCGCAGA TAC TCTGCGC              TTTTTTATTTAAGTA 100 30
 LT978_05665 1095167 .. 1095190 -  -8.9  -5.00616   GTGTGTTTTAAAAAA          GATAGGAGG ATGTAA CCCCCTATC           TTCTCATTCTTCCTA  91 233
 LT978_05635 1089442 .. 1089464 -  -7.7  -5.15634   TACGGCATGAAAAAA           GACCCCTCT GAAAA AGAGGAGCC           AAAAGGTACGGAGGT  89 66
 LT978_05630 1088805 .. 1088829 - -10.1  -5.66684   CAATCCATAAAAAAA          TGCACAGAC TGAACGG GTCTGTGCA          TTTTTATTCGCTTAT 100 37
 LT978_05610 1085201 .. 1085235 -  -8.1  -4.46531   AATGAAAAAATCAAA    GAAAATACGGTTCACA TTTA TATGAACCG-ATTTCC     GGTGACGACATGAAA  83 8
 LT978_05605 NONE
 LT978_05600 1084061 .. 1084084 - -15.4  -3.90286   CATCATAAAGGTAAA          GCCTCCATTC TATG GAATGGAGGC           TTTTGATTGTCACCA 100 35
 LT978_05585 NONE
 LT978_05580 NONE
 LT978_05575 1077848 .. 1077866 -  -6.7  -5.52384   TTGTGATCAAAAAAA             CGACCTC CTCAT AAGGTCG             TTTTTTATTTTGTTT  90 30
 LT978_05510 1065209 .. 1065244 - -11.4  -4.96028   GTGTAAAAAAAATAA    GCAGTCAATAAGT-CCC TTT GAATACTTATTGACTGC    TGTTTTTACATTCTG 100 388
 LT978_05500 1063600 .. 1063632 - -13.7  -3.19192   GCCGATGTAACCGAA      TAAAGCCCAAAAC GCTGATG GTTTTGGGCTTTA      TTTTTTGCTTGTCCG  95 43
 LT978_05480 1059607 .. 1059626 -  -8.6  -3.04792   TCATTACGTCGAAGA            GCCAGC-GT GGG ACAGCTGGC            TTGGGATGTACGGCA  63 196
        cysK 1055143 .. 1055182 - -19.6  -2.53213   GAACTTGCCAAGTGA  TAATAAAAAGGGACGCCG AAAG CGGCATCCCTTTTTATCA   TTCAAATGACCATAA 100 23
 LT978_05445 1052322 .. 1052344 - -12.1  -4.70659   CTTTATATGTAAAAA           TCCCTTTCC GAAAA GGAAAGGGA           TTTTTCTTAATGTCC 100 32
 LT978_05430 1049887 .. 1049912 -   -12   -5.5353   TAGAGGAACAAAAAA         CAAGGCAAAG ACGCTG CTTTGCCTTG          CAGCATGTCAGGCCG 100 66
 LT978_05415 1045927 .. 1045949 -  -3.4  -2.78996   GACGCTCAGGTAAAT           GCGCTTTAAA CCA TTTACAGCGA           GCGTGAGAAACGTCC  44 17
 LT978_05410 1044197 .. 1044216 -  -8.6  -5.80951   ACCGAAAATAAAAAA            GCCCGG-AT GAA ATACCGGGC            TTTTTTATGCATTAT 100 37
 LT978_05400 NONE
 LT978_05395 NONE
 LT978_05390 NONE
 LT978_05385 NONE
        melA 1038381 .. 1038408 - -11.3  -4.67943   GCTGAACATATAAAA        GCG-TCCGGCCC GCCCG GGACCGGATCGC        GAATGATCAGTGATA  90 32
 LT978_05355 1033011 .. 1033029 - -10.2  -5.39721   TGACGACATAAAAAA             TCCCGCTG TTT CGGCGGGA             TTTTTTTGTTTATAC 100 35
 LT978_05275 NONE
 LT978_05270 1017537 .. 1017565 - -13.2  -5.23644   AAGTAAATACAAAAA        GAATCGGCCCGC TTATG ACAGGCCGATTC        TTTATTTTCCGGCAG 100 27
 LT978_05265 1017236 .. 1017261 -  -9.1  -5.37171   AACAGTAAATAAAAA         GAGACATGCGCA TTT TACGC-TGTCTC         TTTTTTTAACGGTTT 100 14
 LT978_05245 1013706 .. 1013725 -  -6.4  -5.51165   AAAAGCGTAAAAAAA            GAGCCC GCTGAAAT GGGCTC             TTTTTTCATAGGATC  90 176
        pckA 1006723 .. 1006756 - -10.3  -5.24449   GACAAACTGAAAAAA     CAAAAGCCGAGGGCA TAAA CGCCCTTGGCTTTTT      TGATTACACGAGAGG 100 29
 LT978_05210 NONE
 LT978_05205 NONE
 LT978_05200 1002892 .. 1002914 - -11.3   -2.9676   ATCATAAAAAACGGA          GACCCG-GCG CTTA CGCACGGGTC           TTTTTTATATTTTTC  79 30
        ytzI 1000912 .. 1000933 -  -5.9  -4.19953   CACGTAACGGCAAAA           CAG-CAGCAT AAT ATGCCGACTG           TAAAAGTGCGTGTCG  69 96
        yidD  999318 ..  999334 -  -3.6  -3.98282   CGTATACGAATTAAA              CGCTGA TGAAG TCTGCG              TTATCGGCCACCATG  58 315
 LT978_05150 NONE
 LT978_05145 NONE
 LT978_05140  995857 ..  995875 -  -8.9  -4.98531   GGCGGAAATGAAAAA             GAGCTGT ATAAA ACAGCTC             TTTTCTTTTATAAAT  91 33
 LT978_05105  986983 ..  986998 - -11.8  -4.66163   ATTTGTATTCAAAAA              CCCCGG CCTG CCGGGG               TTTTAATCAGCATGA 100 28
 LT978_05100  986348 ..  986366 - -11.8  -5.52384   GGGTCATTAAAAAAA             CCTTGCAT AGT ATGCAAGG             TTTTTTATTATGCGT 100 33
        thiT  978360 ..  978382 - -14.9   -5.4505   GCCCGGAATAAAAAA           CAGCAGGCG TAAAC CGCCTGCTG           TTTCAGTTCGTCCGC 100 28
 LT978_04960  975626 ..  975654 - -14.7   -5.7946   GCGCCAAGAAAAAAA        TTGAGAAGGTCTG ACT CAGACCTTCTCGA        TTTTTTGTTTGATTT 100 12
 LT978_04940  971519 ..  971539 -  -9.7  -5.33785   AATCACGACAAAAAA            CGCCTGAAT CAA AATCAGGCG            TTTTTTTCGTCCGTT 100 19
 LT978_04935  970789 ..  970821 -  -9.3  -5.70829   AACACCACAAAAAAA     GACCGGCTGACAAGC GATGA GCTTGT--GCCGGTC     CGTTTTTCGCAATTA 100 38
 LT978_04930  969980 ..  969996 - -13.7  -5.58074   TAAGCATCAAAAAAA              GCCGGCA GCT TGCCGGC              TTTTTTTACATTCCT 100 31
 LT978_04915  966900 ..  966923 - -13.9  -3.27774   GACCGTAATGATCAA          GAGCCCCTC TGCAAT GAGGGGCTC           TTTCTGTCGATGCGG 100 47
 LT978_04895  963557 ..  963568 -  -4.4  -4.07568   CCCTCTTTTGGAAAA                TTGC ACAA GCAA                 CTACATGGTAACTAA  61 116
 LT978_04890  962997 ..  963014 - -12.7  -3.69663   ATTAGGATTGAAGAA             GCCGCCT CTAA AGGCGGC              TTTGTTGTTTATCAA  95 37
 LT978_04870  959373 ..  959396 - -18.2  -5.63517   CGTCCAAATAAAAAA          CATCCGCCCG AATC CGGGCGGATG           TTTTTAGTTTTGATC 100 29
 LT978_04840  949462 ..  949512 -  -2.8  -5.09259   TACCGGAAAAGAAAA GCATT-TCACA-TCCCATCGTC ACAATGACA GACGATGGGATTGTTTTAATGC ATGATCTGATAAAGC  70 19
 LT978_04800 NONE
 LT978_04795  941764 ..  941774 -  -8.2  -3.12895   CGCCGTATGAAGATA                 CCGC AGA GCGG                 GGACGCTAAAGACAA  68 458
 LT978_04775  939051 ..  939068 -  -4.1  -3.34344   TGATCTTTCAATTAA             TCCGG AACGGGAA CCGGA              GCATGATCAATCCAA  49 4
 LT978_04770  938251 ..  938275 - -14.3  -5.15969   CGCGAATTTAAAAAA          GGGGCGCTGAT TCA ATCAGCGCTCC          TTTTATGCATTTTGT 100 28
 LT978_04755  935084 ..  935136 -  -8.8  -5.15634   GACCTTATCAAAAAA TAACCATCAAAAAAAGCACCGGATA TGTA TGTTCGGTGCTTTTTTT-ATGTTTA TCTGACTTCCGGATT  91 23
 LT978_04735  931831 ..  931846 - -11.8  -4.58395   TGCACCCCTTAAAAA              CCGGCG GTTC CGCCGG               TTTTTTTTATTGAAT 100 32
 LT978_04725  930279 ..  930304 -  -9.8  -3.27525   TTTCTCTAAAGCGAA         CGCCCTTATC TCATCT GATAAAGGCG          TTCTTTCCGCTGCTA  78 38
 LT978_04720 NONE
 LT978_04715  928458 ..  928476 -  -7.4  -5.71712   GGCCACATAAAAAAA             CCCAATCA TGC CGACTGGG             TCAAGTTCTTTTAAA 100 26
 LT978_04705 NONE
 LT978_04700  924483 ..  924494 -  -5.8  -3.63515   CGTTATCTTTAATAA                GCTG CCTG CAGC                 GTGTTTTTCCAGATC  62 7
 LT978_04695  924007 ..  924034 - -17.2  -3.54771   TTTATAATAGCATAA        TGGCTAGCTTAC CTGT GTAAGCTAGCCA         TTTTTGTTAAGACAG 100 32
        malK NONE
 LT978_04680  920960 ..  920983 -  -6.7  -5.23316   TATGACAGTAAAAAA          GCACCGTTC ACAGCG AAACGGCGC           TTTTTGACATTATAA  88 35
 LT978_04675  919429 ..  919455 - -13.9  -4.09511   AAGAGCTTGGCAAAA         GAAAAGCTGCA AGAGA TGCAGCTTTTC         CTTCACCGCTCTTTT 100 88
 LT978_04670 NONE
 LT978_04665 NONE
        nupQ  915804 ..  915830 - -11.7  -4.41353   GTATATAGATGAAAA        GAGTTCCGGCAC CAGG GTGC-GGAACTC         TTTTTGTGTGGCAAT 100 40
 LT978_04650 NONE
 LT978_04645 NONE
 LT978_04640 NONE
 LT978_04635 NONE
 LT978_04630 NONE
 LT978_04625 NONE
        mnhG  909532 ..  909566 - -11.6  -4.92812   TTATAACAAAATAAA     CAAACAGCCGGA ACCCTGAATCG TCCGGCTGTTTG     TTTTTACAAATATGA 100 29
 LT978_04585  903529 ..  903545 -  -5.2  -4.75174   CACTCAAGCCAAAAA              GAAATC ATTAA GATTTC              CTTAATCAGGGCCAA  75 360
 LT978_04500  884611 ..  884640 -  -7.9  -6.14618   CAGAAAATAAAAAAA       CACGGATTTGTGA AATT TCACGAACCCATG        CTGCGAAGTTTGATA 100 13
         ald  883357 ..  883381 - -13.6  -5.72622   GTGAGAAAGAAAAAA          GGACAGCCCG CTGAT CAGGCTGTCC          TCTTCATCTCTATTA 100 38
 LT978_04445  868073 ..  868092 - -10.7  -5.40072   TGTTCTGTAAAAAAA            GGCTCCC GGAAAG GGGAGCC             TTTTTGTATGCTGAG 100 47
 LT978_04430  864467 ..  864488 - -14.5   -5.4593   GTAAAAGAATAAAAA           CGCTTCAGC ATCC GCTGAAGCG            TTTTTACATAAAGAA 100 29
        yumC  860471 ..  860497 - -13.1  -5.63517   TGTTTAAATAAAAAA         GAGTCTGTGCC GGTAT GACACAGACTC         TTTTTTATATTATTT 100 35
        guaC  859070 ..  859090 - -11.3   -5.8187   TATTTAATAAAAAAA            TGACATTCA ATA TGAATGTCA            TTTTTTTTTTATCTT 100 60
 LT978_04360  854203 ..  854217 -  -2.8  -3.06696   CGTCTCTTGAACAGA               GCTTTT GAT ATAAGC               CTTTGTCATTGACGA  44 174
 LT978_04355  853340 ..  853370 - -16.3  -4.63486   ATCTGTTTAATAAAA       GCAAAACCCGCTC AACAG AAGCGGGTTTTGC       TTTTTCAAAGAGGTT 100 39
 LT978_04330  848871 ..  848892 - -14.5  -2.60032   GGGCTCTTAAAAATG           GCCGCTGAT CGCA ATCAGCGGC            TTTTTCTTATCAGCC  95 35
 LT978_04320  848095 ..  848115 - -12.6  -6.20267   GTAAAAATAAAAAAA            CCAGGCTG TCATG CAGCCTGG            TTTTATGATTAAAAT 100 34
 LT978_04290  840823 ..  840845 - -11.2  -5.30686   AACATCTATAAAAAA           GGGACGGCCA TGA CGGCCGTCCT           TATTCTGTATTTCTG 100 25
        lytH  836953 ..  836985 - -13.5  -5.48623   AAAGATAAATAAAAA      CACACAGCCGCAA TCTTTCC TGGCGGCTGTGTG      TTTACTTTTTCCTGC 100 27
 LT978_04230  829085 ..  829113 -  -7.5  -3.34398   CTTGTTTGTGAAATA        CAGAAGCGGTT GGGCATG AACCTCTTCTG        CGGCACCGTAGCCTT  67 280
 LT978_04205  822637 ..  822659 -  -7.7  -4.70659   CCGTATATTGAAAAA           GGGAGCC TGATGATGG GGCTCCC           TTATCACTTCTTATG  84 47
        phoB  820312 ..  820328 -  -2.2  -4.56597   CGGCTTGCCGAAAAA             GCCCGCG GTTT CG-GAGC              GAAAATCGTTTGTCT  63 339
 LT978_04165  814480 ..  814502 -  -9.2  -5.12172   GATGAAGAAAGAAAA           CGCTAAGG AGACGAA CCTTAGCG           TTTTTTTGATTGAAG  91 20
 LT978_04160  813922 ..  813941 - -10.7  -5.42164   TATAAATAAGAAAAA            CCGGAGC TTAAGG GCTCCGG             TTTTCTTTATGTTTA 100 38
 LT978_04145 NONE
         csn  810845 ..  810862 - -14.1   -4.4261   CGGTTAATAGTAAAA             CCCCGCC ATAT GGCGGGG              TTTTTTTGTTTATTG 100 35
 LT978_04040  793693 ..  793714 - -12.3  -4.62085   ATCTTCAAAAAATAA           CGGCTGCTC CAAA AAGCAGCCG            CAGTATGTTATTCCA 100 33
 LT978_04030 NONE
 LT978_04025  792054 ..  792083 -    -3  -6.20267   GCAAAAATAAAAAAA       GGA-CTGATGCTT GGCGA AAACATCAAATCC       TTCTTCATTTTACTG 100 35
 LT978_04020 NONE
 LT978_04015  789841 ..  789875 - -16.6  -2.85668   GAGGCCCAGATGATA     TAAAAAAATCCCGCGG CAT CCGCGGGATTTTTCTT     TGTTAAACGGCTTTC 100 28
 LT978_04005 NONE
 LT978_04000  786789 ..  786819 -  -6.8  -5.54403   AAAAAACAATAAAAA       GCTTTCGGCATC AAAGAGA GGTGCCGGAAGC       TTTTTTGCTGAAACG  90 165
 LT978_03975  782190 ..  782225 -  -6.6  -5.33405   CGTATCAAATAAAAA    TCAATACTAAATTATAA TTA TTATAATTTAGT-TTAA    GTGAACAGCTTTTTC  88 22
 LT978_03970  781636 ..  781660 - -10.1    -5.626   GAGCGCATAAAAAAA          GCTGAACCT TCAACTG AGGTTCAGC          TTTTTTCGTCATTCT 100 34
 LT978_03960 NONE
 LT978_03955  777933 ..  777955 -  -9.2  -5.71712   CTTCACATAAAAAAA           GACTGCAATG AAA CACTACAGTC           TACTTTGGTACGATA 100 25
 LT978_03945  776680 ..  776706 - -12.3  -5.00267   AAGCATAAAAAGAAA         GAACGGCTGCA GTCAT TGCGGCCGTTC         TTCTAAATAAACTGC 100 28
 LT978_03930 NONE
 LT978_03925 NONE
 LT978_03920  771251 ..  771275 -  -8.6  -5.71712   CGTGACATAAAAAAA         GGAGAGCG-GC GCCG GCACACTCTCC          CGAGGGACGGGGTCA 100 38
 LT978_03860  760386 ..  760421 -   -14  -5.82316   ATGATGTAAAAAAAA    GCCCTGGCATATGGGGA AGT TCCCCTTGTGCC-GGGC    TTTTTTGTGTTAAAT 100 35
 LT978_03830 NONE
 LT978_03825  754321 ..  754348 - -14.3  -2.72799   TTTTCACACAGAGGA        GACTTGCAGAG ACGGAA CTCTGCAAGTC         GGGTCTGTATCTTCA  95 38
 LT978_03820  753844 ..  753865 -  -8.7  -5.63374   GTAAGATGAAAAAAA           CGCAGAGCCA TTC CGGC-CTGCG           TTTTTTTATTGCGCC 100 31
 LT978_03800  749755 ..  749771 - -13.7  -5.10208   TAAGCGTAATAAAAA              GCCGCTG TGA CAGCGGC              TTCGGGGTTACTTCG 100 33
 LT978_03795  748672 ..  748695 -   -14  -4.91109   TCGGTATGACAAAAA          GACATCTCAC GTCT GTGAGATGTC           TTTTTTTGTTTGCGG 100 48
 LT978_03780  746014 ..  746030 -  -3.7  -3.08046   TCCTCACCCTAAAAG              CGAAAAG ACG CTTTTTG              TTTAAGAGATGCGGC  48 27
 LT978_03775  744107 ..  744127 - -11.9    -4.946   ATGAAACATGAAAAA            TCCCTCCAT ATA ACGGAGGGA            TTTTTTTATTGCTTA 100 31
        modA NONE
        modB  741562 ..  741589 -  -8.4  -4.99134   ATTTTAAATCAAAAA        GCCTCCCGGCGAA AGG TGCGC-GGAAGGC        AGATCGGTCAAGCGG  90 33
 LT978_03755 NONE
 LT978_03750  739671 ..  739702 -  -9.5   -5.9873   TTATTATAAAAAAAA      GAATGAACGGCCG TTAGTG CAGCTGTTCATTC       CTTTGACATGAGAAT 100 70
 LT978_03745 NONE
 LT978_03740 NONE
 LT978_03735  736402 ..  736419 -  -8.4   -5.4505   TGTTCTAAGAAAAAA             CAGCCC TTTACG GGGCTG              TTTTTCTTTACATAA 100 33
 LT978_03725  734826 ..  734847 -  -9.4  -5.85737   AGATGAATAAAAAAA           GTCCGGCA TCTGTT CGCCGGAC            TTTTTTAGATTACGG 100 35
 LT978_03695  724580 ..  724603 - -13.2  -4.67048   GCACGGCAAAATAAA          GAGCCTGCTCC ATA GGAGC-GGCTC          TTTTTCTATTATTTG 100 34
 LT978_03660  716807 ..  716830 - -13.8  -5.78622   TGATCTTAAAAAAAA          CCTCCCCGCC GTAC GGCTGGGAGG           TTTTTTATATTAAAG 100 35
 LT978_03645 NONE
 LT978_03640 NONE
 LT978_03635  712319 ..  712354 -  -4.9  -4.92757   TCATTAATAAGAAAA   GAGCCGAAATTTACCCC GTTT AGAGTAAA--TCGGCTC    TTTACTATTTAAAAG  74 110
 LT978_03585  704134 ..  704170 - -13.3  -3.44844   ATTATATAAGATGAA   TATAAAAAACCCCCGC AAAGTG GCGGGGGTTTTTT-TA    ATGCGGATCACGCTG 100 23
 LT978_03570  702058 ..  702077 - -12.2  -6.07374   ATAAAAAATAAAAAA            GTGTGAGC GAAA GCTCACAC             TTTTTTATTGAGATC 100 30
 LT978_03535 NONE
 LT978_03530  695216 ..  695228 -  -3.4  -4.01045   AGAGGATCAAAAAGA                GGAT GAGGA ATCC                GGGGAGCGTTTTTTC  55 4
 LT978_03525  694762 ..  694787 -  -4.7  -5.67529   AAGCAAAAATAAAAA         CGGCTG-TCCGT TTG AGAGATCAGCCG         CTTATGCGGAAAAGA  93 46
 LT978_03475  686031 ..  686049 -  -5.9  -5.52384   GCGGCATGAAAAAAA             CGCCTTG CGGGT CAGGGCG             TTTTTTTCTTATGGC  89 34
 LT978_03450  681760 ..  681787 -  -9.8  -5.08824   TCCTGACTTAAAAAA        GCAGCGCCCG GTTATCTT CGGGGGCTGC         TTTTTTCTATTTTCG  93 9
 LT978_03440  679935 ..  679959 -  -8.4   -5.8187   CATTCAATAAAAAAA          CCCCCGCGCC AATCA GGCGGCGGGG          TTTCCGTTTTTAAAA 100 35
 LT978_03430  677515 ..  677540 - -13.2  -3.54489   TGAATGGTAAACGAA         GGGGCGCCGG TATCAG CCGGCGCCCT          TTTTATCATAAATCC 100 31
 LT978_03340  656462 ..  656513 - -18.4  -5.26875   CGCCGAATTAAAAAA CAGCTGAGCAAAAAAAGCAATGTGC CGC GCACATTGCTTTTTTTATTC-GCCG ATCCGCCTGACGGAA 100 16
 LT978_03330  654750 ..  654770 -  -7.6  -5.23396   AAGAATGAATAAAAA            GACCCTAA TGATC TTAGGGCC            CTGAATCTTATCGGT 100 33
 LT978_03320  652828 ..  652847 - -12.2  -6.08342   CAATAAATAAAAAAA            CTCTTGCC CCGC GGCAAGAG             TTTTTTTAATGAACG 100 31
 LT978_03310  649841 ..  649853 -  -4.9  -3.78124   ATCAACGATGAAGAA                GAAAA ATT TTTTC                ATAAAATTGCCTCAA  60 91
        gntK NONE
 LT978_03300  646807 ..  646833 - -13.8  -5.64274   TGACCGATAAAAAAA         CAAACCCCGG TTTGCGG CCGGGGTTTG         TTTTTATATAAACGC 100 29
        lutP  639867 ..  639892 -   -14  -3.63805   ACGGTACAGCTGAAA         CCTCCCCGAG CCAAAC CCCGGGGAGG          TTCTCCGTGTTACGG 100 35
        yvfG  638232 ..  638256 - -11.5  -4.45544   CGGCACGAAGGAAAA          CCTTCCGCT TTGAATG AGCGGAAGG          TTTATTTTGTTTCTC 100 27
 LT978_03180 NONE
 LT978_03175  620267 ..  620302 - -14.8   -5.0916   TCTGTAAGATAAAAA    TGAAACGCCAAGGGAG CCGG CTCCCTTGGCGTTTTT     TATGCTTGAAACAGG 100 25
 LT978_03170  619938 ..  619964 - -14.6  -2.54999   ATGAAATGTATGAAC         GAAACCCAGTAA AGG TTACCGGGTTTC         TTTTTCATGTTTGTT  95 14
 LT978_03155  617999 ..  618016 -  -9.8  -5.57729   AAATAAGAGAAAAAA             CCCGGC AGCTTG GCCGGG              TTTTTTGTATCCTTT 100 40
 LT978_03130  615895 ..  615921 - -10.3  -4.27117   TTTGTACAAGATAAA        TTAGC-CAGCTC AATC GAGCTGAGCTAA         TTTTGTTTTATTGCT  87 93
 LT978_03110 NONE
 LT978_03105  613030 ..  613054 - -14.4  -4.88711   AGAAGATAGGAAAAA          CCTCGCAGAT GATAA ATCTGCGAGG          TTTTTATTTTATCTT 100 34
 LT978_03085  608595 ..  608609 -  -2.1  -3.64716   GGAGCGCTCAAAATA              GACCGC AGTC GCG-TC               GGTACATACGGCTGA  48 50
        clpP  607752 ..  607778 -   -16  -5.75599   TAAAGCATAAAAAAA         CCTGCAAGAGAC ATC ATCTCTTGCAGG         TTTTTTGGGCATTAC 100 37
 LT978_03070  605586 ..  605598 -  -2.7  -3.18735   TGAAGACGGTATTAA                CCAAT GTG ATTGA                GCGTATTCATGCTGT  44 9
 LT978_03065  604110 ..  604136 - -12.4  -4.08557   GGGTTGAAAGAAGAA         CATCCATTTCCT CAA AGGAGATGGATG         TTTTGCGGTTTCCAG  95 52
 LT978_03055  602908 ..  602937 -  -8.5  -2.99546   GGATAAATTCAGATA       CGGCCTGTCCA TGAAAAAG CGGACGGGCCG        TGTTTTTATTCGGTT  67 31
 LT978_03040  599329 ..  599349 - -10.3  -4.89063   CTAGTGAAAAATAAA            CCCCGGCTG AAA CGGCCGGGA            TTTTTCATCTCATTG  93 35
 LT978_03035  598731 ..  598750 - -11.4  -5.40072   TTCTCTGCAAAAAAA            CGGCCTCC GCAG GGAAGCCG             TTTTTTGTATGTGTT 100 40
 LT978_02925  577685 ..  577708 -  -9.5  -4.34711   AAAACGAATGGAAAA          CCCCGCAGA TTAACG TCAGCGGGG           TTTTTTTATGACTTG  85 31
        nagA NONE
        nagB NONE
 LT978_02890  571880 ..  571907 - -14.3  -5.58454   GGCAGATCAAAAAAA        CATCTCCAACC CGTAAC GGTTGGAGATG         TTTCATTTCACCCTG 100 28
 LT978_02855  564588 ..  564621 - -18.4  -3.82205   GTAATAGATCAATAA     CAACAGCCCAAAAC TCATCG GTTTTGGGCTGTTG      TTGTTACAGGCTTTT 100 29
 LT978_02835  556447 ..  556478 - -10.8  -3.34715   CACCTCGCGTAAATA      CTGGCAGGACAAGT ATAC ACCCGCCCTGCCCG       TCAATAAAGAGGGAA  82 43
 LT978_02830 NONE
 LT978_02825  554455 ..  554483 -  -8.2  -4.68539   AGGAAAACTAGAAAA       GGTTCCGGAAAGC TGAT GCTTAC-GGAACC        TTTTTCGTTATGCCG  86 33
 LT978_02820  553007 ..  553038 -  -7.2  -3.85254   CAGCATTATAAAAGA      GCCCGG-TGCCGC TAACAAC ACGGCGGCCGGGC      TTTTTTTTACGGCCG  70 32
 LT978_02800  547999 ..  548019 - -15.5  -5.93809   CGTGTATAAAAAAAA            GCCAGTCTG ATA CAGACTGGC            TTTTTTTAATGGTTT 100 43
 LT978_02665 NONE
 LT978_02660  523475 ..  523498 - -12.5  -5.05601   TATTATATAGAAAAA          CCCGATCCT GCTCAA AGGATCGGG           TTTACTCTTAATAGC 100 33
 LT978_02595  507960 ..  507997 - -13.9  -3.48593   CAGCCTTTTACAGAA   TAA-AAAAAACTCTGCAT CAT ATGCAGAGTTTTTTATTA   TTTCAGGCTTTCTTT 100 23
        galU  505673 ..  505719 - -13.3  -4.32046   CGTCTAAAAAGTAAA GATCACATAAAAAAAGCTGCCG GATT CGGCAGCTTTTTCTATTCG-TC AGCTTCTTCTTTTTC 100 17
 LT978_02555 NONE
 LT978_02550  496413 ..  496458 -   -15  -3.83026   CCCGTGTATATGAAA GTATAAAAAAAGGGCTGAAG TGTATG CTTCAGCCCTTTCTTCATGC AAAAAACACCCGCCT 100 46
 LT978_02535 NONE
 LT978_02530 NONE
 LT978_02525  488397 ..  488411 -  -5.6  -4.21194   CTTGAGCACTTAAAA               GACCCG TGG CGCGTC               ATTGAAACGTACTCA  66 389
 LT978_02510  484563 ..  484586 - -16.8   -5.0916   TTTTCAACAGAAAAA          CGGCGGGATT TGCT AATCCCGCCG           TGACATCTTACGCGT 100 33
 LT978_02505  483551 ..  483572 -  -5.8  -4.99972   AGAAAACATGAAAAA           GCCAGGCC GTGAAA GACCTGAC            TTTTACCTTTTATTG  79 35
 LT978_02500  482717 ..  482741 - -17.3  -5.40072   GCTTCCGTAAAAAAA          GACGTCAGAGA GTG TCTCTGACGTC          TTTTTCTTTTACCGT 100 34
 LT978_02470 NONE
 LT978_02465 NONE
 LT978_02460  473924 ..  473937 -  -6.7   -5.7946   TTGGCAACAAAAAAA               GAGAC CGGG GTCTC                TTTTAGTTCACGATG 100 28
 LT978_02455 NONE
        rbsK NONE
        rbsD NONE
 LT978_02440 NONE
        rbsC NONE
        rbsB NONE
 LT978_02425  467558 ..  467586 - -10.4  -5.80003   TCAAGAAAGAAAAAA        CGGATTTCGC GCTGAATTT GCGAAATCCG        TTTTGATATTATGTC 100 34
 LT978_02405  463212 ..  463233 -  -2.2  -6.04378   AAAGCACAAAAAAAA           GAG-GCTGC TTTCG GCGGCCCTC           TTTTTTATGCATTTT 100 30
 LT978_02400  461671 ..  461694 -  -4.6  -4.64846   CCATAAATGATAAAA          CTGCCT-CTCT TAT ACAGCAGGCAG          TTTTTTTTCATAGCT  68 39
 LT978_02380  458125 ..  458146 -  -7.2   -4.7497   CTGATTGAGGAAAAA           GGCTTCCG TTTAGC CGGCAGCC            TATTTACAAATGGCG  81 41
 LT978_02375  457328 ..  457347 -  -7.8  -5.19916   AAAAGACTCAAAAAA            GCCCCCTT TCGA AAGGGGTC             TTTTTGACTAGTTTC 100 63
 LT978_02370  456522 ..  456540 -  -5.2  -4.14764   CTGTAAAGAAGGAAA             GCCGCACA TCC TGTACGGA             ACCCAGGGAGGAGAA  66 361
 LT978_02360 NONE
        chrB NONE
        chrA  453444 ..  453459 -    -9  -5.79595   GGCCAAAATAAAAAA              GCACCT GTCC AGGTGC               TTTTCTTTATAAATG 100 32
 LT978_02335  451590 ..  451615 -  -9.1  -3.19398   AAAAATCACATGTAA         CACTTGG-AGCT CTA AGCCACCAAGTG         TTTTTTTGTATGCCT  70 85
 LT978_02265 NONE
 LT978_02260  436358 ..  436393 - -14.9  -2.87404   ACAGTAAGGACGACA    TAAAAGACCGGCTCT TCCGAG AGAGCCGGTCTTTTT     GCGTTTAATGTGATT 100 30
 LT978_02235  433030 ..  433052 -  -4.7  -5.66684   TAAGGCACAAAAAAA           GGCTGGATG ATTAA CGTCCGGCC           TTTTTTATGATTATA  85 36
 LT978_02220  430520 ..  430532 -  -7.7  -2.71144   CAGTTCGCTGAATCA                GCTGA AAA TCAGC                AAAACCGGAACGCTG  58 373
 LT978_02195 NONE
 LT978_02190  425600 ..  425618 - -17.4   -5.7946   GGCCGAATAAAAAAA             GCCGGGGG CTG CCCCCGGC             TTTTTGTCATATCAG 100 37
 LT978_02170 NONE
 LT978_02165  420180 ..  420206 -  -8.7  -5.31456   TGAAGCGAGAAAAAA        CGCCCGG-GATA TTTC TGTCTCCGGGCG         TTCTGTCTGTTTATA 100 36
 LT978_02155  418239 ..  418262 - -13.2  -5.14985   CCAAACATACAAAAA          CCGGCAGTCTG TGA CAGAC-GCCGG          CTTTTTTTTATATAT 100 33
 LT978_02140 NONE
 LT978_02135  415766 ..  415786 -  -7.6  -5.14563   TGCTTTATTAAAAAA            GAGCTGAC GCGCG ATCAGCTC            TTTTTGTCATTCAAA  89 32
         cls  413633 ..  413654 - -14.5  -4.50976   TTTTATATCAGAAAA           TTCCCGGGA AACA TCCCGGGAA            TTACAAAATCGGCGA 100 26
 LT978_02120  413103 ..  413123 -    -9  -5.64873   CGGAATAAGAAAAAA           TCCCGGGCG GATG CGCC-GGGA            TTTTCCTTTTTAATA 100 35
        xynA  411707 ..  411730 - -11.2  -2.62668   TATGATGTAATGAAT          CATCTCTTTT GTTA AAAAGAGATG           GGTTCATGCCGCTAG  78 391
 LT978_02030  397756 ..  397785 - -13.7  -5.40004   CAGGAAACTAAAAAA       GAATCCTTCTCGG CTGT CTGAGAAGGATTC        TTTTTCTATATTAAC 100 36
 LT978_01935  382711 ..  382736 - -16.9  -5.20216   CACATCATGAAAAAA         GCCCGCCG-GTG ACG CACACGGCGGGC         TTTTGTTACAATGGA 100 330
 LT978_01915 NONE
        racA  379572 ..  379600 - -14.7  -2.59564   CGCTGACTGCATAAT        GAAAAGCTCCCTG TTT CAGGGAGCTTTTT        TGATTAGAATTGAAA 100 29
 LT978_01850  368374 ..  368401 - -10.6  -5.87996   GAAGTAATAAAAAAA        GACTTGCCTCCT TTAA AAGCGGCAAGTC         TTTTTTCTGCATCAG 100 37
         cls NONE
        uvsE NONE
 LT978_01820  360941 ..  360979 -    -8   -4.8143   TGAATAATGGAAAAA   GGATAGACGAGCGGGGGC CGG GCAGCCTCCTGTCTATCC   TTTTTTTATGTAGTC  84 46
 LT978_01775  348829 ..  348848 - -10.8  -5.47821   ATTGACTGAAAAAAA            CAAGGACA GCGG TGTCCTTG             TTTTTCAGCTTGTGA 100 30
 LT978_01750 NONE
 LT978_01745  343007 ..  343032 -    -9  -5.36441   TGTTTATATAAAAAA         CGGCTTGCAG TTTAAC CTGCAAGCCT          AAAAGTAATTATCAT 100 41
 LT978_01740 NONE
 LT978_01735  342162 ..  342193 - -18.2  -3.86897   CTTATTTCGTACAAA      GAAAGCCGGACCAT ATGT ATGATCCGGCTTTC       TTTGGTACTGAAACA 100 261
 LT978_01725 NONE
 LT978_01720  340681 ..  340693 -  -3.4  -5.61881   CCGTAAAAATAAAAA                CTGA GATTG TCAG                GTAGTTCAAATTTGT  81 516
 LT978_01700  336148 ..  336170 - -14.1  -3.16668   GAAGACGCGGATTAA           GCCCGGCGC GCAAT GCACCGGGC           TCAGTCTTTTTTGCC  95 26
 LT978_01680  334051 ..  334075 -  -9.3  -3.91488   AAGGTTGTGAAATAA         GCCGGC-CTG ACATAG CAGCGCCGGC          CATTATCAAGGATTA  81 38
 LT978_01670  331830 ..  331854 -  -9.3  -5.14563   TTTTTTATGAAAAAA         CCAGGC-CGC GATGAA GCGGGCCTGG          TTTTGTTTATTGTCT  91 32
 LT978_01650  328557 ..  328583 -  -4.4  -4.72486   GACAAATGGCAAAAA         CCCCTTTTTCCA TGA CAAGAAAAGGGG         TTTTTTGCGTTATTC  71 35
 LT978_01645 NONE
 LT978_01640  327422 ..  327442 -  -4.6  -2.68003   AAAACCGAAGAACAT            GCTTCCGA TCAGG CCGGCAGC            GATTAAAATGAGAGC  47 45
 LT978_01635 NONE
 LT978_01630  325402 ..  325416 -  -4.3  -3.64703   CTTCGGTTATTTAAA               TCCAT TAGCG ATGGA               CCAAGGGGCGGTCAG  55 103
 LT978_01595  319679 ..  319700 - -10.1  -4.14392   CTGTAATCCGCAAAA           GCCGGTCTT TACG AGGACCGGC            TTTTTTTATAGAAAG  85 31
 LT978_01585  317648 ..  317664 - -10.8  -5.72622   CTGACAAAGAAAAAA              CCCGCC GGACA GGCGGG              TGGGTGTTACACGTG 100 32
 LT978_01580  316745 ..  316765 - -15.5  -4.35483   CTTCATTACAAGAAA            CATCCCGCT GAG AGCGGGATG            TTTTTATTATATGCT 100 32
 LT978_01540  308008 ..  308030 -    -9  -5.88565   CGGATAAGAAAAAAA           GCCCTTCGCT TAA AGCGGCGGGC           TTTACTTTGTTTTCC 100 27
        gerQ  289887 ..  289915 -  -5.4  -6.02919   TTATAAAGAAAAAAA       GCCAATC-CTC TGTCAAGT GAGCGATTGGC        TTTTTGATTTATCTC 100 34
 LT978_01410  283504 ..  283525 - -11.6  -4.32035   AAAAAAATGAAATAA           TCCCCCTC GATCAT GAGGGGGA            TATTTATTTTATTTT  93 34
 LT978_01380  275993 ..  276014 - -12.3  -4.62622   TTAATCAGAAAGAAA           CCCTGCTGA TGCT CCAGCAGGG            TTGTTCGGTTATTCA 100 34
        ywcE  271523 ..  271554 - -11.7  -5.15167   CATCAGGAATAAAAA      GAAACCCTCTTCG TTCAGG CGAAGAGGGTTTT       TTGTGCCTTTATTGG 100 34
 LT978_01330  266800 ..  266823 - -12.4   -5.0538   CTCTACCGGAAAAAA          GCCCCATCCC ATAA GGGACGAGGC           TTTTTTTTATCCTCT 100 32
 LT978_01305  263424 ..  263450 -    -5  -3.17273   CATATAGTAAAAGGA         TCCGCCTGTAAT CTT ACCGCTGGCGGA         TGGTGTTTTTCATTG  52 12
 LT978_01300  262522 ..  262543 -  -2.3  -3.61175   CACAGACGACAAACA           GAAATGAAT GTGA ATCCATTAC            ATGCTCCTCTCGGCC  48 22
 LT978_01295  261854 ..  261878 -  -6.4  -4.75404   AAACGTTAGTAAAAA         GCCCTCTTTGC ATCA GCGA-GAGGGC          TTTGCCATATAGTGT  79 13
 LT978_01260 NONE
 LT978_01255  255917 ..  255938 -    -8  -5.63103   GGCCAACTAAAAAAA           GACCGCTC TGTAAG GAGCAGTC            TTTTATGACATAAAC 100 28
 LT978_01250  255590 ..  255609 -  -7.1  -6.25578   ATTAAAGAAAAAAAA            GCCGG-GC GTGAA GCTCCGGC            TTTTTTCTATTCAAT 100 32
 LT978_01245  254547 ..  254559 -  -2.7  -4.15543   GAAAGAGGGGGAAAA                GAAAA CCC TCTTC                CATCGCTTTAATACG  55 164
 LT978_01235  252816 ..  252853 - -16.5  -4.39329   ACGTCACAGAAGAAA   CATAAAAAAAACGGGCG CTTT CGCCCGTTTTTTTAACG    CTGGAAAAATTCGAT 100 20
 LT978_01225  249547 ..  249578 - -11.7   -4.2558   CAGGTGTGATGAAAA      CGCTTGTGAAACCG TTGAC CGGCT-CACAAGCG      TTTTTTTTATTATTT  93 35
 LT978_01205 NONE
        dltA NONE
        dltB NONE
        dltC NONE
        dltD  241924 ..  241946 -  -9.8  -5.06585   CAAATCACATAAAAA           GCAGGGGAGA GAA TGCCCCCTGC           GTGTTCGTTTTTACG  93 60
 LT978_01180  240680 ..  240697 -  -8.4  -5.56568   AGAGCAGTAAAAAAA             CCCGGA TTCGCT TCCGGG              TTTTTTGCTTATTTT 100 34
 LT978_01145 NONE
 LT978_01140 NONE
 LT978_01135  231128 ..  231156 -  -9.6  -5.80817   GGCAATATAAAAAAA        GCTGGTCTTGCA CTTTT TGCAAAACCGGC        TCATGTTTATTTTTG 100 32
 LT978_01130 NONE
 LT978_01125  229364 ..  229387 -  -8.3  -5.71712   TTTGACACAAAAAAA          CCTTTTAAG ATTCAA CTTAAAAGG           TTTTTCATCTCAAGC 100 35
 LT978_01120 NONE
 LT978_01115 NONE
        celB NONE
 LT978_01105 NONE
 LT978_01100 NONE
        manA NONE
 LT978_01090  222884 ..  222896 -  -6.2  -4.18506   CGATTTTCAAAAGAA                GCGG TTATT CCGC                GATCGGCGTCAAGGA  68 17
        katX  221170 ..  221187 -    -7  -5.78622   TTAGCTCAAAAAAAA             CAGGAC GCGATT GTCCTG              TTTTTTTATTTAATA 100 35
 LT978_01075  218491 ..  218513 -  -9.1  -5.12172   TATGAATAAAGAAAA           GGCGTCTTC ATAGG GAAGGCGCC           TCTTTTTGTTTTAAC  91 10
 LT978_01045  209850 ..  209869 -   -15  -3.36839   TGATGAAATAACAGA            GCCTCCGC ATAT GCGGAGGC             TTTTTTTCAGTTTAA 100 37
 LT978_01020  204697 ..  204721 -  -8.6  -4.86385   AGGTGTAAAAAGAAA          GAGACCTTCA AATGA TGAGGGTCTC          TTTTGTTATGATGAT  91 40
        pepT  202209 ..  202227 -  -8.9  -5.95539   TGTGAAAGAAAAAAA             CCAAAGC AGGGG GCTTTGG             TTTTAAGCGCGCTCT 100 28
 LT978_01005  201391 ..  201420 -  -5.9  -5.71712   TGGTACATAAAAAAA       CTCCTTTTTTATGT TGT ACG-AAAAAAGGAG       GCGGAAGGTTTCATA 100 91
 LT978_01000  200694 ..  200716 - -12.1  -5.88197   TGAAATATAAAAAAA           CTCTTCCCT CGGAT AGGGAAGAG           CTTGCGTCCGCAAAT 100 216
 LT978_00995  199497 ..  199515 - -10.3  -4.78848   TCTGTAAACAGAAAA             GACACGC TGATC GCGTGTC             TTTTTTTATTTCCAG  91 31
 LT978_00985  196770 ..  196800 - -12.6  -6.13503   TATCAATAAAAAAAA       GCGATATCACTCCA AAA CGGAGCGGTATCGC       TTTTTTTCTTTTACC 100 36
        citH  191852 ..  191873 - -13.1  -4.58076   ATAATGTACAGAAAA           GGATTTCCG CCAG CGGAAATCC            TTTTTTAATTAAAAC 100 34
 LT978_00950  188606 ..  188630 -  -8.6  -6.08342   CAAGAAATAAAAAAA          GAAAGCCTGC CGCGC GCAGGCTTTT          TTTACGCCGTTTCCT 100 27
 LT978_00845  166311 ..  166322 -    -3  -5.21236   AATTGATAACAAAAA                TATG AATA CATA                 CCTAAGAAAAAACGA  73 433
        hutP  164008 ..  164046 -  -9.8  -4.96848   GCGCCCATACAAAAA  GGAGCTATGCCATGAAA ATGATA TTTCACG-CATAGCCCC   CTATCATCTGATATC  93 52
        hutH NONE
        hutU NONE
        hutI  159502 ..  159516 -  -3.4  -3.09015   CGGATACTTATCCAA               GAGCGG CTC CCTCCC               TTGAAACGACCGTCT  46 3
        hutG NONE
 LT978_00805  157032 ..  157056 - -10.8  -5.55695   GAATAAGACAAAAAA          GGCACATACC TCATC AGTATGTGCC          TTTTTTTATGGCATG 100 31
 LT978_00765  150282 ..  150326 -  -8.7  -2.91383   ACCTGTATGTACAGA GCGGAATACAAGGCTCG GGATGGCCTGT CGAGCTTTGTATTCCGG CCCTTTTTCTCAGAA  69 35
 LT978_00760  149767 ..  149803 - -13.3   -5.1104   AAACAGAGATAAAAA   CAAATGACAAAGC-CG GTATCT CGCGCTTTGTCATTTG    CATGACCGGCCTATT 100 36
 LT978_00750  148249 ..  148272 - -12.5  -4.88228   AGTGAACATGAAAAA          CGGCACAGT GTCATG ACTGTGCCG           CTTTTTTTATTTTTT 100 32
 LT978_00670 NONE
 LT978_00665  129828 ..  129849 - -10.9  -5.90231   ATAAACATAAAAAAA           CACGCCCTT TCAA AAAGGCGTG            TTATTTTTCTTAGGA 100 35
 LT978_00660  128317 ..  128341 - -15.8  -4.63527   GTATGACGCCAAAAA          GGAATCGCCC AGCGG GGGCGATTCC          TTTTTTGATTACAGT 100 34
 LT978_00645  124984 ..  125006 -  -9.1  -4.58773   CCGATCAAAGGAAAA           GGGCTGGTT TAAGT AACCCGCCC           TCAGCTTGTTCAGCC  86 76
 LT978_00620  119205 ..  119243 - -14.3  -5.40072   TTCGGGGCAAAAAAA  TAATAAAAAAGAATCCGC GCAC GCGGATTCTTTTTT-TTA   TTTAGAGGCTTGAAT 100 23
 LT978_00605 NONE
 LT978_00600 NONE
 LT978_00595  115179 ..  115201 -  -9.8  -5.24531   AGCCGTCATAAAAAA           GCCCGGGC TCAAAAG GCCCGGAC           TTGGGGACATTATTT 100 35
        ahpC  113614 ..  113625 -  -2.2  -2.57136   GCATCAAGTACCAAT                GGAA TGCA CTCC                 TTAGATTTTACCTAC  40 26
        ahpF  112056 ..  112075 - -13.6   -5.1287   TTCATATTTAAAAAA            GCCGCCAT ATGA ATGGCGGC             TTTTACATTAATTCC 100 33
 LT978_00565  106837 ..  106862 - -12.7  -5.47399   GCAACCGTAAAAAAA         GAGCTCAGAGA ATTA TCTCTGAACTC          CATATTCTTCACTTC 100 34
 LT978_00470   88073 ..   88093 -  -9.7  -4.25848   AAGCTGTCATGAAAA            GAGGCCC GCACGCT GGGCCTC            TTTTGTTATTCATCT  86 31
 LT978_00430   79626 ..   79645 - -13.6  -4.19648   CAGATATAAACGAAA            GGCTGAGG AGCA CCTCAGCC             TTTTTTTGTATGGAT 100 41
 LT978_00325   59765 ..   59800 -   -20  -3.05463   ATCCGTTTCATCGAA    TAAGAAAAGCCCTCGC ACGG GCGAAGGCTTTTCTTA     AAAGGAACGTTCCTC 100 23
 LT978_00315   59242 ..   59268 - -13.1  -5.08824   TCTTCATGGAAAAAA        GAGGCGGAAAGC CATC GCTT-CCGCCTC         CCGCACATATATATG 100 53
 LT978_00260   48154 ..   48180 - -10.2  -4.31587   GCTCAAAAATAAGAA         GCAGCAAAGGAT TAA ATTCCTTGCTGC         TTTTTTTTATTTCAT  86 32
 LT978_00250   46614 ..   46636 - -16.3  -6.00086   AGAGCAGAAAAAAAA           CACCCCGGC TGGTT GCCGGGGTG           TTTTGGTTATTCTGC 100 32
 LT978_00245   45524 ..   45542 -  -8.9  -5.14563   GGCCCTAGGAAAAAA             CCTCTCT AAAAA AGAGAGG             TTATTTTTTCTTGAT  91 26
 LT978_00240   43733 ..   43761 - -11.2   -5.0065   TATTGAGAAATAAAA        GAAAATGCCAAT GAAGT ATCGGCATTTTC        TTTTTGTTGTTATTA  93 38
 LT978_00235 NONE
 LT978_00230   41335 ..   41359 - -15.1  -4.46652   TAAACAAAAAGTAAA          CAAGACAGCCA ACG CGGCTGTCTTG          TGATATCCGTAAAAA 100 77
 LT978_00185   34619 ..   34649 - -14.3  -2.78384   TTTCGGCTGATCATA       TGTAAAAGCGATT ATATG AATCGCTTTTACA       TACTTAGAAACATGC  95 40
 LT978_00170   32011 ..   32027 - -10.8  -5.31877   ATGCAGGATAAAAAA              GCCGCC AACAG GGCGGC              TTTTCTTAAGTTAAT 100 165
 LT978_00160   28676 ..   28697 -  -6.5  -3.05521   ATGACACGTCGAATA           GCCGATGCT GACA AGAACCGGC            TTGTTTAAGCGTTTC  60 305
 LT978_00150   27660 ..   27678 -  -9.6  -5.20328   TTTTAAAAAAATAAA             CTCTCCAG TAA CTAGAGAG             TCAAGGGATTATTTA 100 34
 LT978_00145   26642 ..   26659 -  -4.9  -3.69482   GTACCCAATAGATAA             GAGAACA GGTT TATTCTC              TCGTTTCGCTTTTTC  57 295
 LT978_00130   22235 ..   22252 - -12.7  -3.08706   AATCACAGTGTAACA             GTGCGGG GGAA CCCGCAC              TGTTTTATTGATTAA  91 37
 LT978_20020   14169 ..   14186 -  -4.1  -3.39328   AAGCTGAAAAAAGTA             CTCGTCA AGCA TGAGGAG              CCTACATCATAAGGG  51 108
 LT978_20015 NONE
 LT978_20010 NONE
        lepB NONE
 LT978_00065   12224 ..   12251 -  -5.6  -5.36441   GCGGGATAGAAAAAA        GAACCCAGAGCA GTTA TTCTCTAAGTTC         ATGAAAGAAATAAGA  83 24
        yyaC NONE
 LT978_20000   10434 ..   10447 -  -3.9  -3.84346   AGAGGTAAAGAAATA               CTTTA GAGA TAAAG                TGTATCAAACCATTA  57 285
 LT978_19990    9047 ..    9062 -  -5.4  -2.79518   TGAAAACCTGCAAAG              GGAAGA ATTG TCCTCC               ATTGAGGAAGCTCAT  52 128
 LT978_19970    5566 ..    5584 -  -8.9  -3.05963   ACCTTGAGGCTAAGA             TTGACGC TGAGC GCGTCAA             GGAACTGGCGAAAGG  70 147
 LT978_19965 NONE
 LT978_19960    4492 ..    4502 -  -2.6  -3.86822   TAATTTTGGCATAAA                 TAAA TTT TTTA                 TATAGATGGAAACAG  51 101
        lepB    3869 ..    3885 -  -8.1  -4.44914   TACGGAAGAAAACAA              GAAAACA GTC TGTTTTC              ACATTAAAGGTGAAA  83 70
 LT978_19950    1639 ..    1661 -   -10  -3.51545   GAAAACAATCCACAA           CTTATCCACA ATT TGTGGATAAA           GAGAATGGACTGGAT  79 508
 LT978_19940     218 ..     242 -  -2.1  -3.53012   GTCTCTCCCGCCAAA          TTCTTCCCCGA TTT TAGGCAAAGAA          GAATCCGTCATTTCT   0 388
