locus-tag	class	description
BAMY6639_00005	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
BAMY6639_00005	COG3321	synthase
BAMY6639_00005	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BAMY6639_00005	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMY6639_00010	COG2124	cytochrome p450
BAMY6639_00015	COG3209	COG3209 Rhs family protein
BAMY6639_00020	COG3619	membrane
BAMY6639_00030	COG1404	Belongs to the peptidase S8 family
BAMY6639_00045	COG4195	phage-related replication protein
BAMY6639_00050	COG1764	response to oxidative stress
BAMY6639_00060	COG2076	Multidrug Resistance protein
BAMY6639_00100	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BAMY6639_00105	COG4112	unkown
BAMY6639_00110	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMY6639_00120	COG0464	growth
BAMY6639_00125	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BAMY6639_00130	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
BAMY6639_00135	COG0789	Transcriptional regulator
BAMY6639_00140	COG0174	glutamine synthetase
BAMY6639_00155	COG4282	regulation of fungal-type cell wall biogenesis
BAMY6639_00160	COG5444	nuclease activity
BAMY6639_00180	COG2211	Major facilitator Superfamily
BAMY6639_00185	COG3507	Belongs to the glycosyl hydrolase 43 family
BAMY6639_00200	COG1070	Carbohydrate kinase
BAMY6639_00205	COG3848	Pyruvate phosphate dikinase
BAMY6639_00205	COG0574	Belongs to the PEP-utilizing enzyme family
BAMY6639_00225	COG2318	DinB family
BAMY6639_00230	COG1064	alcohol dehydrogenase
BAMY6639_00260	COG0456	acetyltransferase
BAMY6639_00275	COG3397	chitin binding
BAMY6639_00285	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMY6639_00305	COG5434	Belongs to the glycosyl hydrolase 28 family
BAMY6639_00320	COG0756	dUTP diphosphatase activity
BAMY6639_00325	COG4195	phage-related replication protein
BAMY6639_00360	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BAMY6639_00370	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BAMY6639_00390	COG0785	Cytochrome C biogenesis protein
BAMY6639_00395	COG2201	protein-glutamate methylesterase activity
BAMY6639_00400	COG4846	Membrane protein involved in cytochrome C biogenesis
BAMY6639_00410	COG0071	Belongs to the small heat shock protein (HSP20) family
BAMY6639_00425	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BAMY6639_00430	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMY6639_00450	COG0824	Thioesterase
BAMY6639_00460	COG4841	protein insertion into membrane
BAMY6639_00470	COG1832	CoA-binding protein
BAMY6639_00475	COG0187	DNA topoisomerase II activity
BAMY6639_00480	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BAMY6639_00495	COG1115	amino acid carrier protein
BAMY6639_00505	COG1063	alcohol dehydrogenase
BAMY6639_00510	COG0800	Aldolase
BAMY6639_00515	COG1312	Catalyzes the dehydration of D-mannonate
BAMY6639_00520	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_00525	COG1609	Transcriptional regulator
BAMY6639_00530	COG2271	Major facilitator Superfamily
BAMY6639_00600	COG0577	efflux transmembrane transporter activity
BAMY6639_00600	COG1136	(ABC) transporter
BAMY6639_00630	COG2205	protein histidine kinase activity
BAMY6639_00635	COG0745	RESPONSE REGULATOR receiver
BAMY6639_00645	COG3507	Belongs to the glycosyl hydrolase 43 family
BAMY6639_00670	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_00675	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BAMY6639_00680	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BAMY6639_00685	COG2610	gluconate transmembrane transporter activity
BAMY6639_00690	COG2124	cytochrome p450
BAMY6639_00695	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BAMY6639_00710	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAMY6639_00720	COG2246	polysaccharide biosynthetic process
BAMY6639_00725	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BAMY6639_00730	COG0586	Pfam SNARE associated Golgi protein
BAMY6639_00735	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BAMY6639_00740	COG1024	Enoyl-CoA hydratase
BAMY6639_00745	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BAMY6639_00750	COG0511	ligase activity, forming carbon-carbon bonds
BAMY6639_00755	COG0439	Biotin carboxylase
BAMY6639_00760	COG0318	PFAM AMP-dependent synthetase and ligase
BAMY6639_00765	COG1960	acyl-CoA dehydrogenase activity
BAMY6639_00770	COG1649	PFAM Uncharacterised BCR, COG1649
BAMY6639_00780	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_00780	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
BAMY6639_00785	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_00795	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_00800	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_00805	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_00810	COG2027	D-alanyl-D-alanine carboxypeptidase
BAMY6639_00815	COG2017	converts alpha-aldose to the beta-anomer
BAMY6639_00820	COG0534	Mate efflux family protein
BAMY6639_00845	COG0582	viral genome integration into host DNA
BAMY6639_00850	COG0166	Belongs to the GPI family
BAMY6639_00855	COG0405	Gamma-glutamyltransferase
BAMY6639_00860	COG2814	Major facilitator Superfamily
BAMY6639_00865	COG0640	Transcriptional regulator
BAMY6639_00870	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BAMY6639_00880	COG0604	alcohol dehydrogenase
BAMY6639_00885	COG0493	'glutamate synthase
BAMY6639_00890	COG0067	glutamate synthase
BAMY6639_00890	COG0069	glutamate synthase activity
BAMY6639_00890	COG0070	glutamate synthase
BAMY6639_00895	COG0583	DNA-binding transcription factor activity
BAMY6639_00900	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BAMY6639_00915	COG0300	oxidoreductase activity
BAMY6639_00920	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BAMY6639_00930	COG2814	Major facilitator Superfamily
BAMY6639_00935	COG1070	Carbohydrate kinase
BAMY6639_00940	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BAMY6639_00945	COG0243	molybdopterin cofactor binding
BAMY6639_00975	COG5444	nuclease activity
BAMY6639_00980	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMY6639_00985	COG2207	Transcriptional regulator
BAMY6639_00985	COG0662	Cupin 2, conserved barrel domain protein
BAMY6639_00990	COG1309	transcriptional regulator
BAMY6639_00995	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMY6639_01005	COG0640	Transcriptional regulator
BAMY6639_01010	COG0741	lytic transglycosylase activity
BAMY6639_01015	COG2322	membrane
BAMY6639_01030	COG1619	proteins homologs of microcin C7 resistance protein MccF
BAMY6639_01040	COG3584	3D domain protein
BAMY6639_01040	COG1388	LysM domain
BAMY6639_01045	COG0514	ATP-dependent DNA helicase (RecQ)
BAMY6639_01055	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BAMY6639_01060	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BAMY6639_01075	COG0071	Belongs to the small heat shock protein (HSP20) family
BAMY6639_01105	COG1012	belongs to the aldehyde dehydrogenase family
BAMY6639_01110	COG1657	PFAM Prenyltransferase squalene oxidase
BAMY6639_01115	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BAMY6639_01120	COG0733	neurotransmitter:sodium symporter activity
BAMY6639_01125	COG0385	Bile acid
BAMY6639_01130	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMY6639_01135	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAMY6639_01145	COG4548	von Willebrand factor, type A
BAMY6639_01150	COG0714	Associated with various cellular activities
BAMY6639_01155	COG2032	superoxide dismutase activity
BAMY6639_01160	COG0791	NLP P60 protein
BAMY6639_01160	COG1388	LysM domain
BAMY6639_01170	COG1819	glycosyl
BAMY6639_01175	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BAMY6639_01185	COG0534	Mate efflux family protein
BAMY6639_01190	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMY6639_01195	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAMY6639_01200	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAMY6639_01210	COG2962	Rard protein
BAMY6639_01225	COG1942	4-Oxalocrotonate Tautomerase
BAMY6639_01235	COG1733	regulation of RNA biosynthetic process
BAMY6639_01240	COG0778	Nitroreductase
BAMY6639_01245	COG0400	carboxylic ester hydrolase activity
BAMY6639_01250	COG0346	lactoylglutathione lyase activity
BAMY6639_01260	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAMY6639_01270	COG2723	6-phospho-beta-galactosidase activity
BAMY6639_01275	COG2188	Transcriptional regulator
BAMY6639_01280	COG3409	Peptidoglycan-binding domain 1 protein
BAMY6639_01280	COG0793	Belongs to the peptidase S41A family
BAMY6639_01285	COG2226	methyltransferase
BAMY6639_01295	COG1876	peptidase activity
BAMY6639_01315	COG0671	phosphoesterase, PA-phosphatase related
BAMY6639_01350	COG1509	lysine 2,3-aminomutase activity
BAMY6639_01355	COG0456	acetyltransferase
BAMY6639_01360	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAMY6639_01365	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BAMY6639_01370	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BAMY6639_01375	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAMY6639_01380	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
BAMY6639_01390	COG0456	acetyltransferase
BAMY6639_01395	COG0463	Glycosyl transferase, family 2
BAMY6639_01410	COG4641	Protein conserved in bacteria
BAMY6639_01420	COG1086	Polysaccharide biosynthesis protein
BAMY6639_01475	COG1388	LysM domain
BAMY6639_01480	COG0457	Tetratricopeptide repeat
BAMY6639_01495	COG5444	nuclease activity
BAMY6639_01500	COG4282	regulation of fungal-type cell wall biogenesis
BAMY6639_01505	COG1525	nuclease
BAMY6639_01510	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BAMY6639_01530	COG1846	Transcriptional regulator
BAMY6639_01535	COG4698	Protein conserved in bacteria
BAMY6639_01540	COG2755	lipolytic protein G-D-S-L family
BAMY6639_01545	COG1999	signal sequence binding
BAMY6639_01555	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BAMY6639_01560	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BAMY6639_01565	COG1272	protein, Hemolysin III
BAMY6639_01575	COG0204	Acyl-transferase
BAMY6639_01580	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BAMY6639_01595	COG2136	Putative SAM-dependent methyltransferase
BAMY6639_01595	COG2521	methyltransferase
BAMY6639_01610	COG1413	lyase activity
BAMY6639_01615	COG1418	mRNA catabolic process
BAMY6639_01620	COG0386	Belongs to the glutathione peroxidase family
BAMY6639_01635	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BAMY6639_01640	COG1278	Cold shock
BAMY6639_01660	COG0328	RNA-DNA hybrid ribonuclease activity
BAMY6639_01665	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BAMY6639_01670	COG0328	RNA-DNA hybrid ribonuclease activity
BAMY6639_01680	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAMY6639_01695	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BAMY6639_01705	COG1755	Isoprenylcysteine carboxyl methyltransferase
BAMY6639_01710	COG3424	synthase
BAMY6639_01730	COG1335	isochorismatase
BAMY6639_01740	COG2233	PERMEase
BAMY6639_01750	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BAMY6639_01755	COG1199	ATP-dependent helicase activity
BAMY6639_01795	COG3359	exonuclease
BAMY6639_01800	COG1205	dead DEAH box helicase
BAMY6639_01800	COG1111	helicase
BAMY6639_01805	COG2190	(PTS) system
BAMY6639_01810	COG0071	Belongs to the small heat shock protein (HSP20) family
BAMY6639_01850	COG4499	WXG100 protein secretion system (Wss), protein YukC
BAMY6639_01850	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAMY6639_01860	COG2801	Transposase and inactivated derivatives
BAMY6639_01870	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BAMY6639_01875	COG3935	DnaD domain protein
BAMY6639_01885	COG0436	Aminotransferase
BAMY6639_01890	COG5353	protein conserved in bacteria
BAMY6639_01900	COG1199	ATP-dependent helicase activity
BAMY6639_01900	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BAMY6639_01930	COG0438	transferase activity, transferring glycosyl groups
BAMY6639_01935	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAMY6639_01950	COG1694	Mazg nucleotide pyrophosphohydrolase
BAMY6639_01955	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMY6639_01960	COG2140	Oxalate decarboxylase
BAMY6639_01970	COG4347	Protein of unknown function (DUF1405)
BAMY6639_01975	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BAMY6639_01975	COG2010	Cytochrome c
BAMY6639_01980	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BAMY6639_01985	COG0723	plastoquinol--plastocyanin reductase activity
BAMY6639_02000	COG0457	Tetratricopeptide repeat
BAMY6639_02010	COG0287	Prephenate dehydrogenase
BAMY6639_02045	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BAMY6639_02050	COG4401	Chorismate mutase type I
BAMY6639_02065	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BAMY6639_02070	COG0105	UTP biosynthetic process
BAMY6639_02075	COG0142	geranyltranstransferase activity
BAMY6639_02085	COG0142	geranyltranstransferase activity
BAMY6639_02100	COG0776	regulation of translation
BAMY6639_02105	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BAMY6639_02150	COG0539	negative regulation of cytoplasmic translation
BAMY6639_02165	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
BAMY6639_02170	COG2959	enzyme of heme biosynthesis
BAMY6639_02175	COG3409	Peptidoglycan-binding domain 1 protein
BAMY6639_02175	COG3773	Cell wall hydrolase
BAMY6639_02180	COG2339	peptidase activity
BAMY6639_02185	COG0492	ferredoxin-NADP+ reductase activity
BAMY6639_02190	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAMY6639_02195	COG4862	establishment of competence for transformation
BAMY6639_02205	COG1408	metallophosphoesterase
BAMY6639_02215	COG1388	LysM domain
BAMY6639_02220	COG1266	CAAX protease self-immunity
BAMY6639_02225	COG0514	ATP-dependent DNA helicase (RecQ)
BAMY6639_02230	COG4955	Helix-turn-helix domain
BAMY6639_02235	COG1141	Ferredoxin
BAMY6639_02240	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BAMY6639_02245	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BAMY6639_02255	COG1595	DNA-templated transcription, initiation
BAMY6639_02260	COG5002	protein histidine kinase activity
BAMY6639_02265	COG0745	RESPONSE REGULATOR receiver
BAMY6639_02270	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BAMY6639_02275	COG1333	cytochrome c biogenesis protein
BAMY6639_02280	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMY6639_02285	COG1187	pseudouridine synthase activity
BAMY6639_02290	COG0700	Nucleoside recognition
BAMY6639_02295	COG2715	membrane protein required for spore maturation
BAMY6639_02300	COG1686	Belongs to the peptidase S11 family
BAMY6639_02325	COG1547	Domain of unknown function (DUF309)
BAMY6639_02330	COG0456	acetyltransferase
BAMY6639_02345	COG0307	riboflavin synthase, alpha
BAMY6639_02350	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BAMY6639_02350	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BAMY6639_02360	COG0681	Belongs to the peptidase S26 family
BAMY6639_02370	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BAMY6639_02375	COG4086	secreted protein
BAMY6639_02380	COG0019	diaminopimelate decarboxylase activity
BAMY6639_02385	COG0697	spore germination
BAMY6639_02400	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAMY6639_02420	COG1191	sigma factor activity
BAMY6639_02430	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMY6639_02435	COG1686	Belongs to the peptidase S11 family
BAMY6639_02440	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BAMY6639_02445	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
BAMY6639_02450	COG4974	Belongs to the 'phage' integrase family
BAMY6639_02460	COG0735	belongs to the Fur family
BAMY6639_02465	COG1300	Membrane
BAMY6639_02480	COG0281	malic enzyme
BAMY6639_02485	COG1757	Na H antiporter
BAMY6639_02490	COG1027	Aspartate ammonia-lyase
BAMY6639_02495	COG0252	asparaginase activity
BAMY6639_02500	COG1396	sequence-specific DNA binding
BAMY6639_02505	COG1379	DNA repair
BAMY6639_02510	COG0494	nUDIX hydrolase
BAMY6639_02520	COG0667	Aldo Keto reductase
BAMY6639_02530	COG1073	alpha beta
BAMY6639_02540	COG4918	Iron-sulphur cluster biosynthesis
BAMY6639_02545	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BAMY6639_02545	COG0456	acetyltransferase
BAMY6639_02550	COG2329	Antibiotic biosynthesis monooxygenase
BAMY6639_02555	COG0456	acetyltransferase
BAMY6639_02560	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BAMY6639_02575	COG0628	permease
BAMY6639_02585	COG0346	lactoylglutathione lyase activity
BAMY6639_02595	COG3048	D-serine ammonia-lyase activity
BAMY6639_02600	COG0300	oxidoreductase activity
BAMY6639_02605	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMY6639_02610	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAMY6639_02615	COG1024	Enoyl-CoA hydratase
BAMY6639_02620	COG3425	synthase
BAMY6639_02625	COG2124	cytochrome p450
BAMY6639_02630	COG0318	PFAM AMP-dependent synthetase and ligase
BAMY6639_02630	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_02630	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_02630	COG0300	oxidoreductase activity
BAMY6639_02630	COG3321	synthase
BAMY6639_02635	COG0300	oxidoreductase activity
BAMY6639_02635	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_02635	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_02635	COG3321	synthase
BAMY6639_02635	COG0318	PFAM AMP-dependent synthetase and ligase
BAMY6639_02640	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_02640	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMY6639_02640	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAMY6639_02640	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_02640	COG3321	synthase
BAMY6639_02645	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_02645	COG0300	oxidoreductase activity
BAMY6639_02645	COG3321	synthase
BAMY6639_02645	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_02645	COG0318	PFAM AMP-dependent synthetase and ligase
BAMY6639_02650	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_02650	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMY6639_02650	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_02650	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAMY6639_02650	COG3321	synthase
BAMY6639_02655	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_02660	COG0318	PFAM AMP-dependent synthetase and ligase
BAMY6639_02675	COG2070	2-Nitropropane dioxygenase
BAMY6639_02675	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BAMY6639_02680	COG0250	Participates in transcription elongation, termination and antitermination
BAMY6639_02695	COG0596	Alpha beta hydrolase
BAMY6639_02710	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BAMY6639_02715	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BAMY6639_02730	COG0706	membrane insertase activity
BAMY6639_02735	COG2195	Cleaves the N-terminal amino acid of tripeptides
BAMY6639_02740	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BAMY6639_02745	COG0346	lactoylglutathione lyase activity
BAMY6639_02755	COG1376	ErfK ybiS ycfS ynhG family protein
BAMY6639_02760	COG4129	membrane
BAMY6639_02765	COG1126	abc transporter atp-binding protein
BAMY6639_02770	COG0765	amino acid transport
BAMY6639_02775	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMY6639_02785	COG1597	lipid kinase activity
BAMY6639_02790	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAMY6639_02795	COG0022	dehydrogenase e1 component
BAMY6639_02800	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BAMY6639_02805	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BAMY6639_02810	COG3426	butyrate kinase activity
BAMY6639_02815	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAMY6639_02820	COG0280	phosphate acetyltransferase
BAMY6639_02825	COG3829	transcription factor binding
BAMY6639_02825	COG3290	protein histidine kinase activity
BAMY6639_02835	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BAMY6639_02840	COG2079	MmgE PrpD family protein
BAMY6639_02845	COG0372	Belongs to the citrate synthase family
BAMY6639_02850	COG1960	acyl-CoA dehydrogenase activity
BAMY6639_02855	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAMY6639_02860	COG0183	Belongs to the thiolase family
BAMY6639_02865	COG0584	glycerophosphoryl diester phosphodiesterase
BAMY6639_02870	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMY6639_02910	COG1902	pentaerythritol trinitrate reductase activity
BAMY6639_02925	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BAMY6639_02930	COG0745	RESPONSE REGULATOR receiver
BAMY6639_02935	COG0750	zinc metalloprotease
BAMY6639_02940	COG0497	DNA recombination
BAMY6639_02950	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
BAMY6639_02960	COG0142	geranyltranstransferase activity
BAMY6639_02970	COG1570	exodeoxyribonuclease VII activity
BAMY6639_02990	COG1302	Protein conserved in bacteria
BAMY6639_02995	COG0439	Biotin carboxylase
BAMY6639_03000	COG0511	ligase activity, forming carbon-carbon bonds
BAMY6639_03040	COG3854	ATPases associated with a variety of cellular activities
BAMY6639_03055	COG0006	proline dipeptidase activity
BAMY6639_03065	COG3872	metal-dependent enzyme
BAMY6639_03075	COG1752	Esterase of the alpha-beta hydrolase superfamily
BAMY6639_03090	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAMY6639_03110	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BAMY6639_03125	COG1396	sequence-specific DNA binding
BAMY6639_03135	COG0681	Belongs to the peptidase S26 family
BAMY6639_03160	COG4940	Competence protein ComGF
BAMY6639_03170	COG4970	Tfp pilus assembly protein FimT
BAMY6639_03175	COG4537	Required for transformation and DNA binding
BAMY6639_03180	COG1459	type II secretion system
BAMY6639_03185	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BAMY6639_03190	COG0598	Magnesium transport protein CorA
BAMY6639_03195	COG1253	flavin adenine dinucleotide binding
BAMY6639_03200	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMY6639_03210	COG1393	Belongs to the ArsC family
BAMY6639_03220	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMY6639_03230	COG0011	TIGRFAM Protein of
BAMY6639_03240	COG2866	Carboxypeptidase
BAMY6639_03245	COG1940	carbohydrate kinase activity
BAMY6639_03255	COG1757	Na H antiporter
BAMY6639_03265	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BAMY6639_03270	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BAMY6639_03280	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BAMY6639_03285	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BAMY6639_03290	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BAMY6639_03295	COG0581	inorganic phosphate transmembrane transporter activity
BAMY6639_03300	COG0573	inorganic phosphate transmembrane transporter activity
BAMY6639_03305	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BAMY6639_03315	COG0477	Major facilitator Superfamily
BAMY6639_03320	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BAMY6639_03325	COG2839	Protein conserved in bacteria
BAMY6639_03330	COG5521	maltodextrose utilization protein MalA
BAMY6639_03335	COG1388	LysM domain
BAMY6639_03345	COG4709	membrane
BAMY6639_03350	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
BAMY6639_03355	COG0735	belongs to the Fur family
BAMY6639_03360	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMY6639_03375	COG0513	Belongs to the DEAD box helicase family
BAMY6639_03390	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BAMY6639_03395	COG2384	SAM-dependent methyltransferase
BAMY6639_03400	COG2010	Cytochrome c
BAMY6639_03405	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BAMY6639_03410	COG0358	DNA primase activity
BAMY6639_03425	COG0517	IMP dehydrogenase activity
BAMY6639_03430	COG0751	glycine-tRNA ligase activity
BAMY6639_03450	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BAMY6639_03455	COG0295	cytidine deaminase activity
BAMY6639_03460	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BAMY6639_03470	COG1480	7TM receptor with intracellular HD hydrolase
BAMY6639_03475	COG1702	phosphate starvation-inducible protein PhoH
BAMY6639_03480	COG0561	phosphatase activity
BAMY6639_03495	COG4864	UPF0365 protein
BAMY6639_03500	COG1030	water channel activity
BAMY6639_03505	COG1610	YqeY-like protein
BAMY6639_03510	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BAMY6639_03515	COG1283	sodium-dependent phosphate transmembrane transporter activity
BAMY6639_03525	COG2801	Transposase and inactivated derivatives
BAMY6639_03530	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BAMY6639_03535	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BAMY6639_03565	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BAMY6639_03580	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMY6639_03595	COG1466	dna polymerase III delta subunit
BAMY6639_03605	COG2333	competence protein COMEC
BAMY6639_03605	COG0658	competence protein
BAMY6639_03610	COG2131	deaminase
BAMY6639_03615	COG1596	polysaccharide export
BAMY6639_03615	COG1555	photosystem II stabilization
BAMY6639_03620	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BAMY6639_03625	COG2226	methyltransferase
BAMY6639_03630	COG0799	negative regulation of ribosome biogenesis
BAMY6639_03635	COG1713	HD superfamily hydrolase involved in NAD metabolism
BAMY6639_03645	COG1534	Rna-binding protein
BAMY6639_03650	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BAMY6639_03655	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BAMY6639_03660	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
BAMY6639_03675	COG2755	lipolytic protein G-D-S-L family
BAMY6639_03680	COG0726	polysaccharide deacetylase
BAMY6639_03685	COG0398	Pfam SNARE associated Golgi protein
BAMY6639_03720	COG5002	protein histidine kinase activity
BAMY6639_03720	COG0642	Histidine kinase
BAMY6639_03725	COG0745	RESPONSE REGULATOR receiver
BAMY6639_03735	COG2311	Membrane
BAMY6639_03745	COG0454	-acetyltransferase
BAMY6639_03750	COG0563	adenylate kinase activity
BAMY6639_03755	COG2814	Major facilitator Superfamily
BAMY6639_03775	COG5444	nuclease activity
BAMY6639_03810	COG0456	acetyltransferase
BAMY6639_03815	COG2318	DinB family
BAMY6639_03825	COG0561	phosphatase activity
BAMY6639_03830	COG0561	phosphatase activity
BAMY6639_03840	COG1482	cell wall glycoprotein biosynthetic process
BAMY6639_03845	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BAMY6639_03845	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BAMY6639_03845	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMY6639_03850	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMY6639_03850	COG3711	transcriptional antiterminator
BAMY6639_03860	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BAMY6639_03865	COG0583	DNA-binding transcription factor activity
BAMY6639_03870	COG2814	Major facilitator Superfamily
BAMY6639_03875	COG2124	cytochrome p450
BAMY6639_03875	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BAMY6639_03880	COG1309	transcriptional regulator
BAMY6639_03885	COG2226	methyltransferase
BAMY6639_03900	COG2116	formate transmembrane transporter activity
BAMY6639_03905	COG5609	conserved protein (DUF2294)
BAMY6639_03910	COG3383	formate dehydrogenase (NAD+) activity
BAMY6639_03915	COG2427	Protein of unknown function (DUF1641)
BAMY6639_03925	COG0626	cystathionine gamma-synthase activity
BAMY6639_03930	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAMY6639_03955	COG0768	penicillin binding
BAMY6639_03985	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BAMY6639_04000	COG4472	Bacterial protein of unknown function (DUF965)
BAMY6639_04010	COG0628	permease
BAMY6639_04015	COG1126	abc transporter atp-binding protein
BAMY6639_04020	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMY6639_04025	COG0765	amino acid transport
BAMY6639_04030	COG0765	amino acid transport
BAMY6639_04045	COG3881	PFAM PRC-barrel domain
BAMY6639_04050	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BAMY6639_04055	COG0457	Tetratricopeptide repeat
BAMY6639_04065	COG1104	cysteine desulfurase activity
BAMY6639_04070	COG1959	2 iron, 2 sulfur cluster binding
BAMY6639_04075	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BAMY6639_04080	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BAMY6639_04105	COG4991	sh3 domain protein
BAMY6639_04105	COG3103	Sh3 type 3 domain protein
BAMY6639_04105	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMY6639_04115	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BAMY6639_04125	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BAMY6639_04125	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
BAMY6639_04130	COG5416	Lipopolysaccharide assembly protein A domain
BAMY6639_04135	COG0490	domain, Protein
BAMY6639_04140	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BAMY6639_04140	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BAMY6639_04150	COG2244	polysaccharide biosynthetic process
BAMY6639_04155	COG2323	membrane
BAMY6639_04165	COG1862	Preprotein translocase
BAMY6639_04210	COG1388	LysM domain
BAMY6639_04220	COG0157	Belongs to the NadC ModD family
BAMY6639_04225	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BAMY6639_04230	COG1104	cysteine desulfurase activity
BAMY6639_04235	COG1827	regulation of RNA biosynthetic process
BAMY6639_04240	COG0077	Prephenate dehydratase
BAMY6639_04255	COG3290	protein histidine kinase activity
BAMY6639_04260	COG0211	Belongs to the bacterial ribosomal protein bL27 family
BAMY6639_04265	COG2868	ribosomal protein
BAMY6639_04275	COG1994	Peptidase M50
BAMY6639_04280	COG0739	heme binding
BAMY6639_04285	COG2894	cell division
BAMY6639_04295	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BAMY6639_04300	COG1792	Involved in formation and maintenance of cell shape
BAMY6639_04305	COG1077	Cell shape determining protein MreB Mrl
BAMY6639_04325	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BAMY6639_04330	COG0285	dihydrofolate synthase activity
BAMY6639_04335	COG0525	valine-tRNA ligase activity
BAMY6639_04345	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAMY6639_04350	COG1388	LysM domain
BAMY6639_04360	COG0113	porphobilinogen synthase activity
BAMY6639_04365	COG1587	Uroporphyrinogen-III synthase
BAMY6639_04375	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BAMY6639_04395	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BAMY6639_04400	COG1067	ATP-dependent peptidase activity
BAMY6639_04400	COG0470	DNA polymerase III
BAMY6639_04415	COG1477	protein flavinylation
BAMY6639_04415	COG0457	Tetratricopeptide repeat
BAMY6639_04435	COG0473	3-isopropylmalate dehydrogenase activity
BAMY6639_04450	COG0440	acetolactate synthase activity
BAMY6639_04455	COG0028	Belongs to the TPP enzyme family
BAMY6639_04480	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BAMY6639_04495	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
BAMY6639_04520	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BAMY6639_04530	COG5401	PFAM Sporulation and spore germination
BAMY6639_04540	COG1846	Transcriptional regulator
BAMY6639_04550	COG2197	response regulator
BAMY6639_04555	COG0824	Thioesterase
BAMY6639_04560	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BAMY6639_04565	COG1053	succinate dehydrogenase
BAMY6639_04570	COG2009	succinate dehydrogenase
BAMY6639_04575	COG1719	4-vinyl reductase, 4VR
BAMY6639_04580	COG0527	aspartate kinase activity
BAMY6639_04590	COG3118	belongs to the thioredoxin family
BAMY6639_04595	COG3534	alpha-L-arabinofuranosidase
BAMY6639_04600	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BAMY6639_04605	COG2086	electron transfer activity
BAMY6639_04610	COG1024	Enoyl-CoA hydratase
BAMY6639_04615	COG1309	transcriptional regulator
BAMY6639_04620	COG0318	PFAM AMP-dependent synthetase and ligase
BAMY6639_04630	COG3766	membrane
BAMY6639_04640	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BAMY6639_04640	COG1796	DNA polymerase
BAMY6639_04645	COG1286	toxin biosynthetic process
BAMY6639_04660	COG0072	phenylalanine-tRNA ligase activity
BAMY6639_04660	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMY6639_04665	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BAMY6639_04670	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BAMY6639_04680	COG3835	regulator
BAMY6639_04685	COG0277	FAD linked oxidase domain protein
BAMY6639_04690	COG0247	lactate metabolic process
BAMY6639_04695	COG1966	Carbon starvation protein
BAMY6639_04705	COG3534	alpha-L-arabinofuranosidase
BAMY6639_04710	COG0395	ABC-type sugar transport system, permease component
BAMY6639_04715	COG1175	transmembrane transport
BAMY6639_04720	COG1653	transport
BAMY6639_04730	COG0647	UMP catabolic process
BAMY6639_04735	COG0235	Class ii aldolase
BAMY6639_04740	COG1069	ribulokinase activity
BAMY6639_04745	COG2160	L-arabinose isomerase activity
BAMY6639_04750	COG3507	Belongs to the glycosyl hydrolase 43 family
BAMY6639_04755	COG1363	Peptidase, m42
BAMY6639_04765	COG3326	Membrane
BAMY6639_04780	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BAMY6639_04785	COG1346	cytolysis
BAMY6639_04790	COG1380	Effector of murein hydrolase LrgA
BAMY6639_04800	COG3279	Response regulator of the LytR AlgR family
BAMY6639_04805	COG3275	phosphorelay sensor kinase activity
BAMY6639_04825	COG0398	Pfam SNARE associated Golgi protein
BAMY6639_04830	COG1484	DNA-dependent DNA replication
BAMY6639_04835	COG3611	Membrane attachment protein
BAMY6639_04855	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BAMY6639_04860	COG1733	regulation of RNA biosynthetic process
BAMY6639_04865	COG2814	Major facilitator Superfamily
BAMY6639_04870	COG0656	L-ascorbic acid biosynthetic process
BAMY6639_04875	COG0237	dephospho-CoA kinase activity
BAMY6639_04880	COG1971	Probably functions as a manganese efflux pump
BAMY6639_04885	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BAMY6639_04890	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAMY6639_04890	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BAMY6639_04895	COG5002	protein histidine kinase activity
BAMY6639_04900	COG0745	RESPONSE REGULATOR receiver
BAMY6639_04915	COG0538	isocitrate dehydrogenase activity
BAMY6639_04920	COG0372	Belongs to the citrate synthase family
BAMY6639_04935	COG0628	permease
BAMY6639_04940	COG3030	protein affecting phage T7 exclusion by the F plasmid
BAMY6639_04945	COG0469	pyruvate kinase activity
BAMY6639_04970	COG0281	malic enzyme
BAMY6639_04975	COG0587	DNA-directed DNA polymerase activity
BAMY6639_04995	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
BAMY6639_05005	COG4109	DRTGG domain
BAMY6639_05015	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_05035	COG0521	Mo-molybdopterin cofactor biosynthetic process
BAMY6639_05045	COG0827	DNA restriction-modification system
BAMY6639_05050	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BAMY6639_05055	COG3874	Sporulation protein YtfJ
BAMY6639_05065	COG1714	RDD family
BAMY6639_05070	COG0616	signal peptide processing
BAMY6639_05075	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BAMY6639_05080	COG1574	metal-dependent hydrolase with the TIM-barrel fold
BAMY6639_05085	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BAMY6639_05100	COG1104	cysteine desulfurase activity
BAMY6639_05105	COG1114	Component of the transport system for branched-chain amino acids
BAMY6639_05115	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BAMY6639_05120	COG1309	transcriptional regulator
BAMY6639_05125	COG1956	GAF domain-containing protein
BAMY6639_05130	COG2203	Gaf domain
BAMY6639_05130	COG2199	diguanylate cyclase activity
BAMY6639_05145	COG1012	belongs to the aldehyde dehydrogenase family
BAMY6639_05150	COG4282	regulation of fungal-type cell wall biogenesis
BAMY6639_05205	COG1017	nitric oxide dioxygenase activity
BAMY6639_05205	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BAMY6639_05215	COG0693	protein deglycase activity
BAMY6639_05235	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BAMY6639_05240	COG1378	Sugar-specific transcriptional regulator TrmB
BAMY6639_05265	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BAMY6639_05270	COG0454	-acetyltransferase
BAMY6639_05275	COG0517	IMP dehydrogenase activity
BAMY6639_05280	COG0123	including yeast histone deacetylase and acetoin utilization protein
BAMY6639_05285	COG1360	Flagellar Motor Protein
BAMY6639_05290	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BAMY6639_05295	COG1609	Transcriptional regulator
BAMY6639_05300	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
BAMY6639_05300	COG1605	Chorismate mutase
BAMY6639_05305	COG3118	belongs to the thioredoxin family
BAMY6639_05310	COG4980	gas vesicle protein
BAMY6639_05315	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BAMY6639_05325	COG1674	ftsk spoiiie
BAMY6639_05330	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMY6639_05340	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMY6639_05350	COG1363	Peptidase, m42
BAMY6639_05355	COG5584	Small secreted protein
BAMY6639_05360	COG0281	malic enzyme
BAMY6639_05365	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMY6639_05385	COG0510	thiamine kinase activity
BAMY6639_05390	COG1597	lipid kinase activity
BAMY6639_05400	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BAMY6639_05405	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAMY6639_05410	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAMY6639_05415	COG2252	PERMEase
BAMY6639_05420	COG4473	ABC transporter
BAMY6639_05425	COG1131	(ABC) transporter
BAMY6639_05430	COG1349	DNA-binding transcription factor activity
BAMY6639_05435	COG1187	pseudouridine synthase activity
BAMY6639_05440	COG2244	polysaccharide biosynthetic process
BAMY6639_05450	COG2081	HI0933 family
BAMY6639_05455	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BAMY6639_05485	COG1486	melibiose metabolic process
BAMY6639_05495	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BAMY6639_05510	COG2202	Pas domain
BAMY6639_05510	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMY6639_05515	COG2814	Major facilitator Superfamily
BAMY6639_05520	COG5522	Integral membrane protein (intg_mem_TP0381)
BAMY6639_05530	COG0577	efflux transmembrane transporter activity
BAMY6639_05535	COG1136	(ABC) transporter
BAMY6639_05540	COG2205	protein histidine kinase activity
BAMY6639_05545	COG0745	RESPONSE REGULATOR receiver
BAMY6639_05550	COG0577	efflux transmembrane transporter activity
BAMY6639_05555	COG1136	(ABC) transporter
BAMY6639_05575	COG1131	(ABC) transporter
BAMY6639_05580	COG1725	Transcriptional regulator
BAMY6639_05600	COG0477	Major facilitator Superfamily
BAMY6639_05605	COG1242	4 iron, 4 sulfur cluster binding
BAMY6639_05610	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BAMY6639_05620	COG0584	glycerophosphoryl diester phosphodiesterase
BAMY6639_05630	COG2267	carboxylic ester hydrolase activity
BAMY6639_05635	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BAMY6639_05640	COG1113	amino acid transport
BAMY6639_05645	COG0367	asparagine synthase
BAMY6639_05670	COG2801	Transposase and inactivated derivatives
BAMY6639_05680	COG1506	peptidase
BAMY6639_05685	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BAMY6639_05690	COG1116	anion transmembrane transporter activity
BAMY6639_05695	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAMY6639_05700	COG0494	nUDIX hydrolase
BAMY6639_05705	COG4824	toxin secretion phage lysis holin
BAMY6639_05710	COG0783	Belongs to the Dps family
BAMY6639_05735	COG0288	reversible hydration of carbon dioxide
BAMY6639_05745	COG1271	oxidase subunit
BAMY6639_05750	COG1294	oxidase, subunit
BAMY6639_05765	COG4948	Mandelate Racemase Muconate Lactonizing
BAMY6639_05775	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BAMY6639_05780	COG0596	Alpha beta hydrolase
BAMY6639_05790	COG1169	isochorismate synthase
BAMY6639_05795	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BAMY6639_05800	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
BAMY6639_05930	COG3859	Proton-coupled thiamine transporter YuaJ
BAMY6639_05935	COG2268	Band 7 protein
BAMY6639_05940	COG1585	Membrane protein implicated in regulation of membrane protease activity
BAMY6639_05945	COG2318	DinB family
BAMY6639_05955	COG1454	alcohol dehydrogenase
BAMY6639_05965	COG1510	regulation of RNA biosynthetic process
BAMY6639_05975	COG0569	domain protein
BAMY6639_05980	COG1705	Flagellar rod assembly protein muramidase FlgJ
BAMY6639_05985	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BAMY6639_05985	COG1017	nitric oxide dioxygenase activity
BAMY6639_06040	COG0628	permease
BAMY6639_06045	COG0673	inositol 2-dehydrogenase activity
BAMY6639_06050	COG0693	protein deglycase activity
BAMY6639_06055	COG0840	transmembrane signaling receptor activity
BAMY6639_06060	COG0840	transmembrane signaling receptor activity
BAMY6639_06065	COG0840	transmembrane signaling receptor activity
BAMY6639_06070	COG0840	transmembrane signaling receptor activity
BAMY6639_06085	COG2070	2-Nitropropane dioxygenase
BAMY6639_06090	COG0432	Pfam Uncharacterised protein family UPF0047
BAMY6639_06095	COG0366	Alpha amylase catalytic
BAMY6639_06100	COG1253	flavin adenine dinucleotide binding
BAMY6639_06105	COG2738	Putative neutral zinc metallopeptidase
BAMY6639_06120	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BAMY6639_06150	COG1335	isochorismatase
BAMY6639_06155	COG1979	alcohol dehydrogenase
BAMY6639_06160	COG1979	alcohol dehydrogenase
BAMY6639_06165	COG2155	Conserved Protein
BAMY6639_06170	COG1098	S1 RNA binding domain
BAMY6639_06175	COG0436	Aminotransferase
BAMY6639_06180	COG1522	sequence-specific DNA binding
BAMY6639_06185	COG2267	carboxylic ester hydrolase activity
BAMY6639_06195	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BAMY6639_06200	COG2205	protein histidine kinase activity
BAMY6639_06210	COG5018	Exonuclease
BAMY6639_06215	COG2814	Major facilitator Superfamily
BAMY6639_06220	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAMY6639_06225	COG3011	Protein conserved in bacteria
BAMY6639_06235	COG3290	protein histidine kinase activity
BAMY6639_06240	COG4565	transcriptional regulatory protein
BAMY6639_06280	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BAMY6639_06280	COG2111	Na H antiporter
BAMY6639_06285	COG2111	Na H antiporter
BAMY6639_06290	COG1006	Multisubunit Na H antiporter MnhC subunit
BAMY6639_06295	COG0651	ATP synthesis coupled electron transport
BAMY6639_06300	COG1863	multisubunit Na H antiporter MnhE subunit
BAMY6639_06305	COG2212	antiporter activity
BAMY6639_06310	COG1320	monovalent cation:proton antiporter activity
BAMY6639_06315	COG2050	protein possibly involved in aromatic compounds catabolism
BAMY6639_06320	COG2197	response regulator
BAMY6639_06325	COG4585	Histidine kinase
BAMY6639_06335	COG0142	geranyltranstransferase activity
BAMY6639_06350	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BAMY6639_06355	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BAMY6639_06360	COG1335	isochorismatase
BAMY6639_06365	COG5506	Protein of unknown function (DUF1694)
BAMY6639_06380	COG0628	permease
BAMY6639_06390	COG1418	mRNA catabolic process
BAMY6639_06395	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_06405	COG1511	domain protein
BAMY6639_06410	COG0433	COG0433 Predicted ATPase
BAMY6639_06410	COG1674	ftsk spoiiie
BAMY6639_06415	COG4499	WXG100 protein secretion system (Wss), protein YukC
BAMY6639_06420	COG5417	Belongs to the EsaB family
BAMY6639_06425	COG4842	Belongs to the WXG100 family
BAMY6639_06430	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
BAMY6639_06430	COG2508	Transcriptional regulator
BAMY6639_06435	COG0686	Belongs to the AlaDH PNT family
BAMY6639_06440	COG5634	Uncharacterized conserved protein (DUF2278)
BAMY6639_06445	COG3251	PFAM MbtH domain protein
BAMY6639_06450	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_06455	COG1535	isochorismatase
BAMY6639_06455	COG3433	isochorismatase activity
BAMY6639_06460	COG1021	2,3-dihydroxybenzoate-AMP ligase
BAMY6639_06465	COG1169	isochorismate synthase
BAMY6639_06470	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_06475	COG2819	hydrolase of the alpha beta superfamily
BAMY6639_06480	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BAMY6639_06485	COG1268	BioY protein
BAMY6639_06490	COG2056	Na+-H+ antiporter family
BAMY6639_06500	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
BAMY6639_06505	COG3584	3D domain protein
BAMY6639_06520	COG1252	NADH dehydrogenase
BAMY6639_06555	COG1131	(ABC) transporter
BAMY6639_06575	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
BAMY6639_06590	COG0316	Belongs to the HesB IscA family
BAMY6639_06600	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAMY6639_06610	COG1252	NADH dehydrogenase
BAMY6639_06615	COG4837	Protein of unknown function (DUF1462)
BAMY6639_06620	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BAMY6639_06625	COG4946	Tricorn protease homolog
BAMY6639_06625	COG1506	peptidase
BAMY6639_06625	COG0823	Involved in the tonB-independent uptake of proteins
BAMY6639_06635	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BAMY6639_06640	COG0460	homoserine dehydrogenase
BAMY6639_06645	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAMY6639_06650	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BAMY6639_06655	COG0647	UMP catabolic process
BAMY6639_06660	COG2445	Protein of unknown function DUF86
BAMY6639_06665	COG4470	Protein conserved in bacteria
BAMY6639_06675	COG0739	heme binding
BAMY6639_06685	COG0737	Belongs to the 5'-nucleotidase family
BAMY6639_06690	COG0730	response to heat
BAMY6639_06695	COG1801	Protein of unknown function DUF72
BAMY6639_06710	COG2508	Transcriptional regulator
BAMY6639_06720	COG0457	Tetratricopeptide repeat
BAMY6639_06735	COG2814	Major facilitator Superfamily
BAMY6639_06740	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BAMY6639_06745	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAMY6639_06750	COG2356	endonuclease I
BAMY6639_06755	COG3842	ATPase activity
BAMY6639_06760	COG2188	Transcriptional regulator
BAMY6639_06765	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BAMY6639_06770	COG0395	ABC-type sugar transport system, permease component
BAMY6639_06775	COG1175	transmembrane transport
BAMY6639_06780	COG1653	transport
BAMY6639_06785	COG2222	sugar isomerase
BAMY6639_06790	COG0789	Transcriptional regulator
BAMY6639_06805	COG0322	excinuclease ABC activity
BAMY6639_06810	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAMY6639_06815	COG2226	methyltransferase
BAMY6639_06825	COG3409	Peptidoglycan-binding domain 1 protein
BAMY6639_06830	COG0719	Fe-S assembly protein
BAMY6639_06835	COG0822	iron-sulfur transferase activity
BAMY6639_06840	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BAMY6639_06845	COG0719	Fe-S assembly protein
BAMY6639_06850	COG0396	ATPase activity
BAMY6639_06860	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BAMY6639_06865	COG1464	Belongs to the NlpA lipoprotein family
BAMY6639_06870	COG2011	ABC-type metal ion transport system permease component
BAMY6639_06875	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BAMY6639_06885	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMY6639_06890	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BAMY6639_06905	COG1393	Belongs to the ArsC family
BAMY6639_06910	COG1960	acyl-CoA dehydrogenase activity
BAMY6639_06915	COG0183	Belongs to the thiolase family
BAMY6639_06920	COG1024	Enoyl-CoA hydratase
BAMY6639_06920	COG1250	3-hydroxyacyl-CoA dehydrogenase
BAMY6639_06935	COG0477	Major facilitator Superfamily
BAMY6639_06945	COG5577	PFAM Coat F domain
BAMY6639_06950	COG1846	Transcriptional regulator
BAMY6639_06955	COG0477	Major facilitator Superfamily
BAMY6639_06960	COG1942	4-Oxalocrotonate Tautomerase
BAMY6639_06965	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_06970	COG0583	DNA-binding transcription factor activity
BAMY6639_06980	COG0583	DNA-binding transcription factor activity
BAMY6639_07005	COG1120	ATPase activity
BAMY6639_07020	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_07025	COG0783	Belongs to the Dps family
BAMY6639_07030	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAMY6639_07035	COG0745	RESPONSE REGULATOR receiver
BAMY6639_07040	COG2770	Histidine kinase
BAMY6639_07040	COG2205	protein histidine kinase activity
BAMY6639_07055	COG1309	transcriptional regulator
BAMY6639_07060	COG0114	fumarate hydratase activity
BAMY6639_07070	COG0697	spore germination
BAMY6639_07075	COG0814	amino acid
BAMY6639_07085	COG2197	response regulator
BAMY6639_07090	COG4585	Histidine kinase
BAMY6639_07095	COG4758	membrane
BAMY6639_07100	COG3595	metallopeptidase activity
BAMY6639_07105	COG1842	Phage shock protein A
BAMY6639_07110	COG4758	membrane
BAMY6639_07115	COG2814	Major facilitator Superfamily
BAMY6639_07120	COG2096	Adenosyltransferase
BAMY6639_07125	COG1120	ATPase activity
BAMY6639_07130	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMY6639_07135	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMY6639_07140	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_07145	COG3386	PFAM SMP-30 Gluconolaconase
BAMY6639_07150	COG2205	protein histidine kinase activity
BAMY6639_07155	COG0745	RESPONSE REGULATOR receiver
BAMY6639_07165	COG1191	sigma factor activity
BAMY6639_07175	COG2140	Oxalate decarboxylase
BAMY6639_07185	COG1120	ATPase activity
BAMY6639_07190	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMY6639_07195	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMY6639_07200	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMY6639_07205	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BAMY6639_07210	COG0531	amino acid
BAMY6639_07225	COG1988	membrane-bound metal-dependent
BAMY6639_07230	COG1368	sulfuric ester hydrolase activity
BAMY6639_07235	COG1910	domain protein
BAMY6639_07240	COG0725	ABC transporter, periplasmic molybdate-binding protein
BAMY6639_07245	COG4149	molybdate abc transporter
BAMY6639_07250	COG2197	response regulator
BAMY6639_07255	COG3850	Histidine kinase
BAMY6639_07260	COG1131	(ABC) transporter
BAMY6639_07270	COG0842	Transport permease protein
BAMY6639_07275	COG0656	L-ascorbic acid biosynthetic process
BAMY6639_07300	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BAMY6639_07305	COG3973	AAA domain
BAMY6639_07310	COG2860	membrane
BAMY6639_07320	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BAMY6639_07325	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BAMY6639_07330	COG2217	Heavy metal translocating P-type atpase
BAMY6639_07335	COG2217	Heavy metal translocating P-type atpase
BAMY6639_07340	COG2608	mercury ion transmembrane transporter activity
BAMY6639_07345	COG1937	Protein conserved in bacteria
BAMY6639_07350	COG0673	inositol 2-dehydrogenase activity
BAMY6639_07365	COG2814	Major facilitator Superfamily
BAMY6639_07385	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAMY6639_07390	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BAMY6639_07395	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAMY6639_07400	COG1126	abc transporter atp-binding protein
BAMY6639_07405	COG0765	amino acid transport
BAMY6639_07410	COG0765	amino acid transport
BAMY6639_07415	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMY6639_07420	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMY6639_07425	COG0454	-acetyltransferase
BAMY6639_07430	COG0583	DNA-binding transcription factor activity
BAMY6639_07435	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_07440	COG2732	(Barnase) inhibitor
BAMY6639_07450	COG0557	exoribonuclease II activity
BAMY6639_07455	COG1647	Serine aminopeptidase, S33
BAMY6639_07460	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BAMY6639_07465	COG1476	TRANSCRIPTIONal
BAMY6639_07470	COG1396	sequence-specific DNA binding
BAMY6639_07475	COG1396	sequence-specific DNA binding
BAMY6639_07480	COG1733	regulation of RNA biosynthetic process
BAMY6639_07515	COG1174	glycine betaine transport
BAMY6639_07520	COG1732	Glycine betaine
BAMY6639_07525	COG1174	glycine betaine transport
BAMY6639_07530	COG1125	glycine betaine transport
BAMY6639_07530	COG0517	IMP dehydrogenase activity
BAMY6639_07535	COG1510	regulation of RNA biosynthetic process
BAMY6639_07540	COG1174	glycine betaine transport
BAMY6639_07545	COG1732	Glycine betaine
BAMY6639_07550	COG1174	glycine betaine transport
BAMY6639_07555	COG0517	IMP dehydrogenase activity
BAMY6639_07555	COG1125	glycine betaine transport
BAMY6639_07560	COG1510	regulation of RNA biosynthetic process
BAMY6639_07565	COG2095	MarC family integral membrane protein
BAMY6639_07570	COG3064	Membrane
BAMY6639_07575	COG4640	response to antibiotic
BAMY6639_07580	COG0456	acetyltransferase
BAMY6639_07595	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BAMY6639_07615	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAMY6639_07620	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BAMY6639_07630	COG2234	aminopeptidase activity
BAMY6639_07650	COG0126	phosphoglycerate kinase activity
BAMY6639_07660	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BAMY6639_07665	COG2390	Transcriptional regulator
BAMY6639_07670	COG2814	Major facilitator Superfamily
BAMY6639_07675	COG1609	Transcriptional regulator
BAMY6639_07680	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAMY6639_07690	COG0583	DNA-binding transcription factor activity
BAMY6639_07695	COG0697	spore germination
BAMY6639_07700	COG1113	amino acid transport
BAMY6639_07710	COG1609	Transcriptional regulator
BAMY6639_07720	COG0561	phosphatase activity
BAMY6639_07725	COG1737	Transcriptional regulator
BAMY6639_07730	COG1070	Carbohydrate kinase
BAMY6639_07755	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMY6639_07760	COG2186	Transcriptional regulator
BAMY6639_07765	COG1620	l-lactate permease
BAMY6639_07770	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BAMY6639_07780	COG5039	Polysaccharide pyruvyl transferase
BAMY6639_07785	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BAMY6639_07790	COG0110	maltose O-acetyltransferase activity
BAMY6639_07795	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BAMY6639_07800	COG2244	polysaccharide biosynthetic process
BAMY6639_07805	COG1216	Glycosyl transferase, family 2
BAMY6639_07810	COG5039	Polysaccharide pyruvyl transferase
BAMY6639_07815	COG1216	Glycosyl transferase, family 2
BAMY6639_07825	COG0438	transferase activity, transferring glycosyl groups
BAMY6639_07830	COG1215	transferase activity, transferring glycosyl groups
BAMY6639_07835	COG0438	transferase activity, transferring glycosyl groups
BAMY6639_07840	COG1086	Polysaccharide biosynthesis protein
BAMY6639_07845	COG0489	protein tyrosine kinase activity
BAMY6639_07850	COG3944	biosynthesis protein
BAMY6639_07855	COG1396	sequence-specific DNA binding
BAMY6639_07860	COG2272	Belongs to the type-B carboxylesterase lipase family
BAMY6639_07865	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BAMY6639_07870	COG2364	Membrane
BAMY6639_07875	COG0456	acetyltransferase
BAMY6639_07880	COG3479	Phenolic acid decarboxylase
BAMY6639_07950	COG2223	nitrite transmembrane transporter activity
BAMY6639_07955	COG1609	Transcriptional regulator
BAMY6639_07965	COG0583	DNA-binding transcription factor activity
BAMY6639_07970	COG2828	Protein conserved in bacteria
BAMY6639_07975	COG2814	Major facilitator Superfamily
BAMY6639_07975	COG0477	Major facilitator Superfamily
BAMY6639_07980	COG1611	Belongs to the LOG family
BAMY6639_07985	COG1694	Mazg nucleotide pyrophosphohydrolase
BAMY6639_07990	COG0659	secondary active sulfate transmembrane transporter activity
BAMY6639_07995	COG0288	reversible hydration of carbon dioxide
BAMY6639_08000	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BAMY6639_08005	COG4290	ribonuclease
BAMY6639_08010	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BAMY6639_08015	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMY6639_08025	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BAMY6639_08035	COG1051	belongs to the nudix hydrolase family
BAMY6639_08040	COG0492	ferredoxin-NADP+ reductase activity
BAMY6639_08050	COG0457	Tetratricopeptide repeat
BAMY6639_08055	COG5002	protein histidine kinase activity
BAMY6639_08060	COG0745	RESPONSE REGULATOR receiver
BAMY6639_08070	COG1132	(ABC) transporter
BAMY6639_08075	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BAMY6639_08075	COG0140	phosphoribosyl-ATP diphosphatase activity
BAMY6639_08100	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BAMY6639_08115	COG4990	cell redox homeostasis
BAMY6639_08120	COG0110	maltose O-acetyltransferase activity
BAMY6639_08140	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BAMY6639_08155	COG1309	transcriptional regulator
BAMY6639_08160	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BAMY6639_08165	COG1950	PFAM Membrane protein of
BAMY6639_08170	COG1983	PspC domain protein
BAMY6639_08175	COG3595	metallopeptidase activity
BAMY6639_08190	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BAMY6639_08200	COG4897	Protein conserved in bacteria
BAMY6639_08205	COG3848	Pyruvate phosphate dikinase
BAMY6639_08205	COG0574	Belongs to the PEP-utilizing enzyme family
BAMY6639_08210	COG1309	transcriptional regulator
BAMY6639_08215	COG2814	Major facilitator Superfamily
BAMY6639_08230	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAMY6639_08245	COG3420	alginic acid biosynthetic process
BAMY6639_08250	COG2177	Part of the ABC transporter FtsEX involved in
BAMY6639_08255	COG2884	Cell division ATP-binding protein ftsE
BAMY6639_08260	COG2010	Cytochrome c
BAMY6639_08265	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMY6639_08270	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BAMY6639_08280	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BAMY6639_08295	COG1516	flagellar protein fliS
BAMY6639_08300	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BAMY6639_08305	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BAMY6639_08325	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BAMY6639_08330	COG1256	bacterial-type flagellum assembly
BAMY6639_08330	COG4786	Flagellar basal body rod
BAMY6639_08335	COG3418	PFAM FlgN family protein
BAMY6639_08340	COG2747	anti-sigma28 factor FlgM
BAMY6639_08350	COG1040	competence protein
BAMY6639_08360	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
BAMY6639_08365	COG1307	EDD domain protein, DegV family
BAMY6639_08370	COG2197	response regulator
BAMY6639_08375	COG4585	Histidine kinase
BAMY6639_08380	COG1739	Uncharacterized protein family UPF0029
BAMY6639_08385	COG1316	TRANSCRIPTIONal
BAMY6639_08390	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BAMY6639_08395	COG0438	transferase activity, transferring glycosyl groups
BAMY6639_08400	COG1215	transferase activity, transferring glycosyl groups
BAMY6639_08405	COG3206	protein involved in exopolysaccharide biosynthesis
BAMY6639_08410	COG3307	-O-antigen
BAMY6639_08415	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BAMY6639_08420	COG0297	glycogen (starch) synthase activity
BAMY6639_08420	COG0438	transferase activity, transferring glycosyl groups
BAMY6639_08425	COG2244	polysaccharide biosynthetic process
BAMY6639_08435	COG2247	cell wall binding repeat
BAMY6639_08435	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMY6639_08440	COG2385	sporulation resulting in formation of a cellular spore
BAMY6639_08440	COG2247	cell wall binding repeat
BAMY6639_08450	COG1316	TRANSCRIPTIONal
BAMY6639_08455	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BAMY6639_08460	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BAMY6639_08465	COG1134	teichoic acid transport
BAMY6639_08470	COG1682	transport, permease protein
BAMY6639_08480	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BAMY6639_08485	COG0438	transferase activity, transferring glycosyl groups
BAMY6639_08490	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
BAMY6639_08495	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
BAMY6639_08500	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BAMY6639_08505	COG4193	domain, Protein
BAMY6639_08510	COG1482	cell wall glycoprotein biosynthetic process
BAMY6639_08520	COG0697	spore germination
BAMY6639_08525	COG0814	amino acid
BAMY6639_08535	COG1215	transferase activity, transferring glycosyl groups
BAMY6639_08540	COG2814	Major facilitator Superfamily
BAMY6639_08545	COG1316	TRANSCRIPTIONal
BAMY6639_08550	COG0561	phosphatase activity
BAMY6639_08560	COG2433	Pfam Transposase IS66
BAMY6639_08565	COG0791	NLP P60 protein
BAMY6639_08575	COG2843	Capsule synthesis protein
BAMY6639_08585	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BAMY6639_08595	COG0697	spore germination
BAMY6639_08600	COG0814	amino acid
BAMY6639_08610	COG1609	Transcriptional regulator
BAMY6639_08615	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BAMY6639_08625	COG1129	ABC transporter
BAMY6639_08630	COG1172	Belongs to the binding-protein-dependent transport system permease family
BAMY6639_08635	COG1879	ABC-type sugar transport system periplasmic component
BAMY6639_08640	COG3103	Sh3 type 3 domain protein
BAMY6639_08645	COG2249	NAD(P)H dehydrogenase (quinone) activity
BAMY6639_08650	COG3527	Alpha-acetolactate decarboxylase
BAMY6639_08655	COG0028	Belongs to the TPP enzyme family
BAMY6639_08660	COG0583	DNA-binding transcription factor activity
BAMY6639_08665	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BAMY6639_08680	COG5337	Spore coat protein CotH
BAMY6639_08695	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BAMY6639_08705	COG0405	Gamma-glutamyltransferase
BAMY6639_08710	COG1522	sequence-specific DNA binding
BAMY6639_08715	COG2059	Chromate
BAMY6639_08720	COG2059	Chromate
BAMY6639_08745	COG5444	nuclease activity
BAMY6639_08760	COG3878	Protein conserved in bacteria
BAMY6639_08765	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BAMY6639_08775	COG4464	protein tyrosine phosphatase activity
BAMY6639_08780	COG0489	protein tyrosine kinase activity
BAMY6639_08785	COG3944	biosynthesis protein
BAMY6639_08795	COG4715	Zinc finger, swim domain protein
BAMY6639_08800	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BAMY6639_08805	COG0561	phosphatase activity
BAMY6639_08810	COG1349	DNA-binding transcription factor activity
BAMY6639_08815	COG0629	single-stranded DNA binding
BAMY6639_08840	COG0457	Tetratricopeptide repeat
BAMY6639_08845	COG4786	Flagellar basal body rod
BAMY6639_08850	COG4786	Flagellar basal body rod
BAMY6639_08855	COG1077	Cell shape determining protein MreB Mrl
BAMY6639_08860	COG1609	Transcriptional regulator
BAMY6639_08865	COG1846	Transcriptional regulator
BAMY6639_08870	COG2814	Major facilitator Superfamily
BAMY6639_08875	COG1953	Uracil, thiamine, allantoin
BAMY6639_08885	COG0477	Major facilitator Superfamily
BAMY6639_08890	COG1335	isochorismatase
BAMY6639_08895	COG0004	ammonium transporteR
BAMY6639_08900	COG0347	Belongs to the P(II) protein family
BAMY6639_08905	COG0772	Belongs to the SEDS family
BAMY6639_08910	COG0671	phosphoesterase, PA-phosphatase related
BAMY6639_08920	COG0739	heme binding
BAMY6639_08925	COG1247	-acetyltransferase
BAMY6639_08945	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAMY6639_08960	COG0726	polysaccharide deacetylase
BAMY6639_08965	COG1959	2 iron, 2 sulfur cluster binding
BAMY6639_08980	COG0831	urea catabolic process
BAMY6639_08990	COG1994	Peptidase M50
BAMY6639_08995	COG0457	Tetratricopeptide repeat
BAMY6639_09005	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BAMY6639_09015	COG2304	oxidoreductase activity
BAMY6639_09025	COG2304	oxidoreductase activity
BAMY6639_09030	COG2385	sporulation resulting in formation of a cellular spore
BAMY6639_09035	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BAMY6639_09045	COG4836	Membrane
BAMY6639_09085	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BAMY6639_09120	COG0698	ribose 5-phosphate isomerase
BAMY6639_09125	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BAMY6639_09135	COG0009	L-threonylcarbamoyladenylate synthase
BAMY6639_09140	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BAMY6639_09160	COG2890	protein-(glutamine-N5) methyltransferase activity
BAMY6639_09165	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BAMY6639_09170	COG0346	lactoylglutathione lyase activity
BAMY6639_09175	COG0789	Transcriptional regulator
BAMY6639_09180	COG0679	Auxin Efflux Carrier
BAMY6639_09185	COG0281	malic enzyme
BAMY6639_09195	COG0254	rRNA binding
BAMY6639_09200	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BAMY6639_09205	COG1494	fructose-1,6-bisphosphatase
BAMY6639_09210	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BAMY6639_09220	COG0191	fructose-bisphosphate aldolase activity
BAMY6639_09225	COG2204	response regulator
BAMY6639_09230	COG4821	SIS domain
BAMY6639_09245	COG2181	nitrate reductase activity
BAMY6639_09245	COG0247	lactate metabolic process
BAMY6639_09250	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAMY6639_09265	COG1132	(ABC) transporter
BAMY6639_09270	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BAMY6639_09280	COG2181	nitrate reductase activity
BAMY6639_09285	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BAMY6639_09290	COG1140	nitrate reductase beta subunit
BAMY6639_09295	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BAMY6639_09300	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BAMY6639_09310	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BAMY6639_09315	COG2223	nitrite transmembrane transporter activity
BAMY6639_09325	COG4506	Protein conserved in bacteria
BAMY6639_09335	COG3391	amine dehydrogenase activity
BAMY6639_09340	COG3391	amine dehydrogenase activity
BAMY6639_09345	COG0457	Tetratricopeptide repeat
BAMY6639_09390	COG0010	Belongs to the arginase family
BAMY6639_09395	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BAMY6639_09400	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAMY6639_09415	COG1994	Peptidase M50
BAMY6639_09420	COG1942	4-Oxalocrotonate Tautomerase
BAMY6639_09425	COG1846	Transcriptional regulator
BAMY6639_09430	COG0531	amino acid
BAMY6639_09435	COG3465	dGTPase activity
BAMY6639_09440	COG1078	dGTPase activity
BAMY6639_09460	COG1695	Transcriptional regulator
BAMY6639_09475	COG1131	(ABC) transporter
BAMY6639_09480	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BAMY6639_09510	COG0583	DNA-binding transcription factor activity
BAMY6639_09515	COG2855	membrane
BAMY6639_09520	COG0280	phosphate acetyltransferase
BAMY6639_09530	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_09535	COG0436	Aminotransferase
BAMY6639_09565	COG2814	Major facilitator Superfamily
BAMY6639_09570	COG2814	Major facilitator Superfamily
BAMY6639_09575	COG0833	amino acid
BAMY6639_09580	COG4187	Peptidase family M20/M25/M40
BAMY6639_09585	COG1012	belongs to the aldehyde dehydrogenase family
BAMY6639_09590	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BAMY6639_09595	COG2205	protein histidine kinase activity
BAMY6639_09600	COG0745	RESPONSE REGULATOR receiver
BAMY6639_09620	COG1131	(ABC) transporter
BAMY6639_09625	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
BAMY6639_09630	COG1091	dTDP-4-dehydrorhamnose reductase activity
BAMY6639_09635	COG1088	dTDP-glucose 4,6-dehydratase activity
BAMY6639_09640	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BAMY6639_09645	COG3980	spore coat polysaccharide biosynthesis protein
BAMY6639_09650	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
BAMY6639_09655	COG2089	acid synthase
BAMY6639_09660	COG0456	acetyltransferase
BAMY6639_09665	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BAMY6639_09670	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BAMY6639_09675	COG0463	Glycosyl transferase, family 2
BAMY6639_09685	COG2363	Small membrane protein
BAMY6639_09690	COG2233	PERMEase
BAMY6639_09705	COG1216	Glycosyl transferase, family 2
BAMY6639_09720	COG1695	Transcriptional regulator
BAMY6639_09725	COG0351	phosphomethylpyrimidine kinase
BAMY6639_09735	COG1621	beta-fructofuranosidase activity
BAMY6639_09740	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMY6639_09740	COG1263	PTS System
BAMY6639_09745	COG3711	transcriptional antiterminator
BAMY6639_09755	COG1404	Belongs to the peptidase S8 family
BAMY6639_09760	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAMY6639_09765	COG0778	Nitroreductase
BAMY6639_09770	COG0772	Belongs to the SEDS family
BAMY6639_09775	COG0454	-acetyltransferase
BAMY6639_09795	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BAMY6639_09800	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BAMY6639_09805	COG2261	transglycosylase associated protein
BAMY6639_09810	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
BAMY6639_09815	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BAMY6639_09820	COG2246	polysaccharide biosynthetic process
BAMY6639_09825	COG1309	transcriptional regulator
BAMY6639_09845	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BAMY6639_09850	COG2837	iron assimilation
BAMY6639_09855	COG2822	iron ion transport
BAMY6639_09875	COG0583	DNA-binding transcription factor activity
BAMY6639_09885	COG1346	cytolysis
BAMY6639_09890	COG4895	conserved protein (DUF2196)
BAMY6639_09900	COG0789	Transcriptional regulator
BAMY6639_09905	COG5504	Zn-dependent protease
BAMY6639_09910	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BAMY6639_09915	COG0346	lactoylglutathione lyase activity
BAMY6639_09920	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMY6639_09925	COG1404	Belongs to the peptidase S8 family
BAMY6639_09930	COG1442	glycosyl transferase family 8
BAMY6639_09940	COG2357	RelA SpoT domain protein
BAMY6639_09945	COG1575	Belongs to the MenA family. Type 1 subfamily
BAMY6639_09960	COG1696	Membrane protein involved in D-alanine export
BAMY6639_09970	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BAMY6639_09975	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAMY6639_09980	COG1486	melibiose metabolic process
BAMY6639_09985	COG1447	Phosphotransferase system cellobiose-specific component IIA
BAMY6639_09990	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMY6639_09995	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMY6639_10000	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMY6639_10000	COG3711	transcriptional antiterminator
BAMY6639_10015	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMY6639_10020	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMY6639_10025	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMY6639_10030	COG0640	Transcriptional regulator
BAMY6639_10035	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BAMY6639_10040	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMY6639_10045	COG1447	Phosphotransferase system cellobiose-specific component IIA
BAMY6639_10050	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMY6639_10055	COG2723	6-phospho-beta-galactosidase activity
BAMY6639_10060	COG1940	carbohydrate kinase activity
BAMY6639_10065	COG1482	cell wall glycoprotein biosynthetic process
BAMY6639_10075	COG0753	catalase activity
BAMY6639_10080	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
BAMY6639_10085	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BAMY6639_10090	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BAMY6639_10095	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BAMY6639_10100	COG4988	ABC transporter
BAMY6639_10105	COG1294	oxidase, subunit
BAMY6639_10110	COG1271	oxidase subunit
BAMY6639_10115	COG3493	citrate carrier protein
BAMY6639_10120	COG0726	polysaccharide deacetylase
BAMY6639_10125	COG3842	ATPase activity
BAMY6639_10130	COG2508	Transcriptional regulator
BAMY6639_10135	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMY6639_10145	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BAMY6639_10165	COG4894	glucomannan catabolic process
BAMY6639_10170	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BAMY6639_10175	COG0500	methyltransferase
BAMY6639_10185	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAMY6639_10205	COG0693	protein deglycase activity
BAMY6639_10205	COG0753	catalase activity
BAMY6639_10210	COG2851	Citrate transporter
BAMY6639_10215	COG2273	Hydrolase Family 16
BAMY6639_10220	COG3711	transcriptional antiterminator
BAMY6639_10225	COG2270	Major facilitator Superfamily
BAMY6639_10230	COG0513	Belongs to the DEAD box helicase family
BAMY6639_10315	COG0697	spore germination
BAMY6639_10320	COG0589	response to stress
BAMY6639_10325	COG2723	6-phospho-beta-galactosidase activity
BAMY6639_10330	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMY6639_10330	COG1263	PTS System
BAMY6639_10330	COG2190	(PTS) system
BAMY6639_10350	COG3507	Belongs to the glycosyl hydrolase 43 family
BAMY6639_10375	COG0010	Belongs to the arginase family
BAMY6639_10380	COG0833	amino acid
BAMY6639_10385	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BAMY6639_10390	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BAMY6639_10400	COG2390	Transcriptional regulator
BAMY6639_10405	COG0561	phosphatase activity
BAMY6639_10435	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMY6639_10440	COG5294	Protein conserved in bacteria
BAMY6639_10445	COG0577	efflux transmembrane transporter activity
BAMY6639_10450	COG1136	(ABC) transporter
BAMY6639_10455	COG2205	protein histidine kinase activity
BAMY6639_10460	COG0745	RESPONSE REGULATOR receiver
BAMY6639_10470	COG2205	protein histidine kinase activity
BAMY6639_10475	COG0745	RESPONSE REGULATOR receiver
BAMY6639_10505	COG1082	Xylose isomerase domain protein TIM barrel
BAMY6639_10515	COG2814	Major facilitator Superfamily
BAMY6639_10545	COG1349	DNA-binding transcription factor activity
BAMY6639_10550	COG0667	Aldo Keto reductase
BAMY6639_10555	COG2814	Major facilitator Superfamily
BAMY6639_10570	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_10575	COG2197	response regulator
BAMY6639_10580	COG4585	Histidine kinase
BAMY6639_10585	COG3239	Fatty acid desaturase
BAMY6639_10595	COG1309	transcriptional regulator
BAMY6639_10600	COG1012	belongs to the aldehyde dehydrogenase family
BAMY6639_10605	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BAMY6639_10615	COG0640	Transcriptional regulator
BAMY6639_10620	COG2814	Major facilitator Superfamily
BAMY6639_10625	COG1714	RDD family
BAMY6639_10635	COG0501	Belongs to the peptidase M48B family
BAMY6639_10640	COG1715	Restriction endonuclease
BAMY6639_10645	COG0450	alkyl hydroperoxide reductase
BAMY6639_10650	COG3634	alkyl hydroperoxide reductase activity
BAMY6639_10655	COG3177	Filamentation induced by cAMP protein fic
BAMY6639_10660	COG1113	amino acid transport
BAMY6639_10670	COG2080	2 iron, 2 sulfur cluster binding
BAMY6639_10685	COG2068	MobA-Related Protein
BAMY6639_10690	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
BAMY6639_10770	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
BAMY6639_10775	COG0456	acetyltransferase
BAMY6639_10785	COG0457	Tetratricopeptide repeat
BAMY6639_10790	COG0010	Belongs to the arginase family
BAMY6639_10795	COG0833	amino acid
BAMY6639_10800	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BAMY6639_10815	COG0488	(ABC) transporter
BAMY6639_10830	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAMY6639_10835	COG3850	Histidine kinase
BAMY6639_10835	COG5002	protein histidine kinase activity
BAMY6639_10840	COG0745	RESPONSE REGULATOR receiver
BAMY6639_10855	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAMY6639_10860	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BAMY6639_10865	COG4853	Protein conserved in bacteria
BAMY6639_10870	COG4863	YycH protein
BAMY6639_10875	COG5002	protein histidine kinase activity
BAMY6639_10880	COG0745	RESPONSE REGULATOR receiver
BAMY6639_10915	COG0346	lactoylglutathione lyase activity
BAMY6639_10920	COG0305	Participates in initiation and elongation during chromosome replication
BAMY6639_10935	COG3093	addiction module antidote protein HigA
BAMY6639_10940	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BAMY6639_10945	COG0297	glycogen (starch) synthase activity
BAMY6639_10955	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
BAMY6639_10960	COG0438	transferase activity, transferring glycosyl groups
BAMY6639_10985	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
BAMY6639_10990	COG4241	membrane
BAMY6639_11000	COG5577	PFAM Coat F domain
BAMY6639_11005	COG1733	regulation of RNA biosynthetic process
BAMY6639_11020	COG2801	Transposase and inactivated derivatives
BAMY6639_11025	COG0697	spore germination
BAMY6639_11030	COG1621	beta-fructofuranosidase activity
BAMY6639_11035	COG1621	beta-fructofuranosidase activity
BAMY6639_11040	COG1802	Transcriptional regulator
BAMY6639_11045	COG2318	DinB family
BAMY6639_11050	COG2211	Major facilitator Superfamily
BAMY6639_11060	COG0583	DNA-binding transcription factor activity
BAMY6639_11075	COG0778	Nitroreductase
BAMY6639_11080	COG1846	Transcriptional regulator
BAMY6639_11085	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMY6639_11090	COG1846	Transcriptional regulator
BAMY6639_11095	COG2153	protein acetylation
BAMY6639_11105	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BAMY6639_11110	COG0583	DNA-binding transcription factor activity
BAMY6639_11115	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_11125	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMY6639_11130	COG0697	spore germination
BAMY6639_11135	COG1331	Highly conserved protein containing a thioredoxin domain
BAMY6639_11140	COG1266	CAAX protease self-immunity
BAMY6639_11145	COG2814	Major facilitator Superfamily
BAMY6639_11145	COG0477	Major facilitator Superfamily
BAMY6639_11150	COG0346	lactoylglutathione lyase activity
BAMY6639_11155	COG1609	Transcriptional regulator
BAMY6639_11160	COG0708	Exodeoxyribonuclease III
BAMY6639_11165	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BAMY6639_11170	COG2169	Transcriptional regulator
BAMY6639_11180	COG0629	single-stranded DNA binding
BAMY6639_11190	COG0012	GTP binding
BAMY6639_11195	COG0243	molybdopterin cofactor binding
BAMY6639_11200	COG4481	Protein conserved in bacteria
BAMY6639_11205	COG3949	Membrane
BAMY6639_11220	COG1475	DNA binding
BAMY6639_11225	COG1192	Involved in chromosome partitioning
BAMY6639_11250	COG1847	R3H domain protein
BAMY6639_11255	COG0706	membrane insertase activity
BAMY6639_11275	COG0592	DNA-directed DNA polymerase activity
BAMY6639_11280	COG2501	S4 domain
BAMY6639_11295	COG0187	DNA topoisomerase II activity
BAMY6639_11300	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BAMY6639_11325	COG0517	IMP dehydrogenase activity
BAMY6639_11325	COG0516	GMP reductase activity
BAMY6639_11330	COG1686	Belongs to the peptidase S11 family
BAMY6639_11350	COG1929	Belongs to the glycerate kinase type-1 family
BAMY6639_11360	COG1428	Deoxynucleoside kinase
BAMY6639_11365	COG1428	Deoxynucleoside kinase
BAMY6639_11375	COG3858	chitin binding
BAMY6639_11375	COG1388	LysM domain
BAMY6639_11380	COG1335	isochorismatase
BAMY6639_11385	COG0590	tRNA wobble adenosine to inosine editing
BAMY6639_11390	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BAMY6639_11395	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BAMY6639_11435	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
BAMY6639_11440	COG3853	Toxic anion resistance protein (TelA)
BAMY6639_11445	COG1982	Orn Lys Arg decarboxylase major
BAMY6639_11455	COG3870	Protein conserved in bacteria
BAMY6639_11460	COG1728	Protein conserved in bacteria
BAMY6639_11465	COG0470	DNA polymerase III
BAMY6639_11470	COG1774	PSP1 C-terminal conserved region
BAMY6639_11480	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BAMY6639_11490	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BAMY6639_11495	COG2002	toxin-antitoxin pair type II binding
BAMY6639_11500	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMY6639_11500	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BAMY6639_11505	COG0084	hydrolase, TatD family'
BAMY6639_11510	COG3583	domain protein
BAMY6639_11510	COG3584	3D domain protein
BAMY6639_11515	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BAMY6639_11520	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BAMY6639_11530	COG4466	Protein conserved in bacteria
BAMY6639_11545	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BAMY6639_11550	COG0251	oxidation-reduction process
BAMY6639_11565	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BAMY6639_11585	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BAMY6639_11590	COG2002	toxin-antitoxin pair type II binding
BAMY6639_11595	COG2244	polysaccharide biosynthetic process
BAMY6639_11600	COG3956	TIGRFAM MazG family protein
BAMY6639_11605	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BAMY6639_11620	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
BAMY6639_11625	COG1098	S1 RNA binding domain
BAMY6639_11640	COG2208	phosphoserine phosphatase activity
BAMY6639_11645	COG2304	oxidoreductase activity
BAMY6639_11650	COG0515	serine threonine protein kinase
BAMY6639_11655	COG0037	tRNA processing
BAMY6639_11665	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BAMY6639_11680	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAMY6639_11685	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BAMY6639_11690	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BAMY6639_11695	COG0512	Glutamine amidotransferase of anthranilate synthase
BAMY6639_11700	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAMY6639_11705	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BAMY6639_11710	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BAMY6639_11715	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BAMY6639_11720	COG1396	sequence-specific DNA binding
BAMY6639_11725	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BAMY6639_11730	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BAMY6639_11815	COG4463	regulation of RNA biosynthetic process
BAMY6639_11820	COG3880	PFAM UvrB UvrC protein
BAMY6639_11830	COG0542	response to heat
BAMY6639_11835	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BAMY6639_11840	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
BAMY6639_11845	COG4956	integral membrane protein (PIN domain superfamily)
BAMY6639_11865	COG1045	serine acetyltransferase
BAMY6639_11875	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BAMY6639_11880	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BAMY6639_11885	COG3688	RNA-binding protein containing a PIN domain
BAMY6639_11890	COG1595	DNA-templated transcription, initiation
BAMY6639_11895	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BAMY6639_11900	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BAMY6639_11905	COG0250	Participates in transcription elongation, termination and antitermination
BAMY6639_11910	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BAMY6639_11925	COG0222	ribosome binding
BAMY6639_11930	COG2813	Specifically methylates the guanine in position
BAMY6639_11945	COG1358	cellular component organization or biogenesis
BAMY6639_11970	COG0596	Alpha beta hydrolase
BAMY6639_11975	COG0051	transcription antitermination factor activity, RNA binding
BAMY6639_11990	COG0089	rRNA binding
BAMY6639_12000	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BAMY6639_12005	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BAMY6639_12015	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BAMY6639_12020	COG0255	Belongs to the universal ribosomal protein uL29 family
BAMY6639_12070	COG1841	ribosomal large subunit assembly
BAMY6639_12080	COG0201	protein transport
BAMY6639_12090	COG0024	Methionine aminopeptidase
BAMY6639_12095	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BAMY6639_12100	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BAMY6639_12125	COG1122	ATPase activity
BAMY6639_12130	COG1122	ATPase activity
BAMY6639_12135	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BAMY6639_12155	COG2226	methyltransferase
BAMY6639_12160	COG2318	DinB family
BAMY6639_12170	COG0860	N-Acetylmuramoyl-L-alanine amidase
BAMY6639_12175	COG0489	protein tyrosine kinase activity
BAMY6639_12185	COG2194	sulfuric ester hydrolase activity
BAMY6639_12190	COG0726	polysaccharide deacetylase
BAMY6639_12250	COG0738	Major facilitator superfamily
BAMY6639_12255	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BAMY6639_12270	COG0659	secondary active sulfate transmembrane transporter activity
BAMY6639_12275	COG0385	Bile acid
BAMY6639_12280	COG2819	hydrolase of the alpha beta superfamily
BAMY6639_12285	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMY6639_12290	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMY6639_12295	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMY6639_12300	COG2207	Transcriptional regulator
BAMY6639_12300	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BAMY6639_12305	COG3876	Protein conserved in bacteria
BAMY6639_12310	COG1472	Belongs to the glycosyl hydrolase 3 family
BAMY6639_12315	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAMY6639_12320	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMY6639_12320	COG1263	PTS System
BAMY6639_12330	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMY6639_12335	COG1683	Conserved Protein
BAMY6639_12365	COG1595	DNA-templated transcription, initiation
BAMY6639_12370	COG5662	AntiSigma factor
BAMY6639_12375	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BAMY6639_12380	COG4856	YbbR-like protein
BAMY6639_12420	COG1346	cytolysis
BAMY6639_12425	COG1380	Effector of murein hydrolase LrgA
BAMY6639_12430	COG1846	Transcriptional regulator
BAMY6639_12435	COG1113	amino acid transport
BAMY6639_12440	COG1011	Hydrolase
BAMY6639_12445	COG4585	Histidine kinase
BAMY6639_12450	COG2197	response regulator
BAMY6639_12455	COG1131	(ABC) transporter
BAMY6639_12475	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
BAMY6639_12485	COG4221	oxidoreductase activity
BAMY6639_12485	COG3321	synthase
BAMY6639_12485	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_12485	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_12490	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_12490	COG0318	PFAM AMP-dependent synthetase and ligase
BAMY6639_12490	COG0300	oxidoreductase activity
BAMY6639_12490	COG3321	synthase
BAMY6639_12490	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_12530	COG0531	amino acid
BAMY6639_12540	COG0584	glycerophosphoryl diester phosphodiesterase
BAMY6639_12545	COG2271	Major facilitator Superfamily
BAMY6639_12555	COG2368	4-hydroxyphenylacetate
BAMY6639_12565	COG3409	Peptidoglycan-binding domain 1 protein
BAMY6639_12585	COG0371	Dehydrogenase
BAMY6639_12595	COG1183	phosphatidylcholine synthase activity
BAMY6639_12600	COG0586	Pfam SNARE associated Golgi protein
BAMY6639_12605	COG0688	phosphatidylethanolamine metabolic process
BAMY6639_12620	COG1301	dicarboxylic acid transport
BAMY6639_12625	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAMY6639_12630	COG0833	amino acid
BAMY6639_12635	COG2040	homocysteine
BAMY6639_12640	COG1115	amino acid carrier protein
BAMY6639_12645	COG2066	Belongs to the glutaminase family
BAMY6639_12650	COG4191	Histidine kinase
BAMY6639_12655	COG0784	Response regulator, receiver
BAMY6639_12660	COG3173	Aminoglycoside phosphotransferase
BAMY6639_12680	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BAMY6639_12685	COG0778	Nitroreductase
BAMY6639_12690	COG0346	lactoylglutathione lyase activity
BAMY6639_12695	COG2259	Doxx family
BAMY6639_12700	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMY6639_12710	COG3773	Cell wall hydrolase
BAMY6639_12720	COG3540	Alkaline phosphatase
BAMY6639_12725	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BAMY6639_12730	COG0805	protein transport
BAMY6639_12740	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BAMY6639_12745	COG0477	Major facilitator Superfamily
BAMY6639_12750	COG1309	transcriptional regulator
BAMY6639_12755	COG0252	asparaginase activity
BAMY6639_12765	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
BAMY6639_12770	COG3012	SEC-C Motif Domain Protein
BAMY6639_12770	COG1405	negative regulation of cell septum assembly
BAMY6639_12775	COG0667	Aldo Keto reductase
BAMY6639_12785	COG1595	DNA-templated transcription, initiation
BAMY6639_12790	COG1595	DNA-templated transcription, initiation
BAMY6639_12795	COG1876	peptidase activity
BAMY6639_12800	COG0457	Tetratricopeptide repeat
BAMY6639_12805	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_12810	COG0366	Alpha amylase catalytic
BAMY6639_12815	COG0803	Belongs to the bacterial solute-binding protein 9 family
BAMY6639_12820	COG1121	(ABC) transporter
BAMY6639_12825	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BAMY6639_12830	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BAMY6639_12835	COG2310	stress, protein
BAMY6639_12840	COG2310	stress, protein
BAMY6639_12845	COG2310	stress, protein
BAMY6639_12850	COG0861	Integral membrane protein TerC family
BAMY6639_12860	COG3853	Toxic anion resistance protein (TelA)
BAMY6639_12865	COG0477	Major facilitator Superfamily
BAMY6639_12870	COG4175	Glycine betaine
BAMY6639_12870	COG0517	IMP dehydrogenase activity
BAMY6639_12875	COG4176	ABC-type proline glycine betaine transport system permease component
BAMY6639_12880	COG2113	Glycine betaine
BAMY6639_12885	COG1473	amidohydrolase
BAMY6639_12890	COG1288	antiporter activity
BAMY6639_12900	COG0366	Alpha amylase catalytic
BAMY6639_12910	COG2814	Major facilitator Superfamily
BAMY6639_12915	COG1846	Transcriptional regulator
BAMY6639_12920	COG1280	lysine exporter protein (LysE YggA)
BAMY6639_12925	COG3403	YqcI/YcgG family
BAMY6639_12935	COG3665	Urea carboxylase-associated protein
BAMY6639_12945	COG2801	Transposase and inactivated derivatives
BAMY6639_12960	COG1660	Displays ATPase and GTPase activities
BAMY6639_12965	COG1082	Xylose isomerase domain protein TIM barrel
BAMY6639_12970	COG2271	Major facilitator Superfamily
BAMY6639_12975	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BAMY6639_12980	COG3458	cephalosporin-C deacetylase activity
BAMY6639_12985	COG3541	Predicted nucleotidyltransferase
BAMY6639_12990	COG0506	proline dehydrogenase activity
BAMY6639_12995	COG1012	belongs to the aldehyde dehydrogenase family
BAMY6639_13000	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAMY6639_13005	COG2508	Transcriptional regulator
BAMY6639_13015	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BAMY6639_13015	COG1587	Uroporphyrinogen-III synthase
BAMY6639_13020	COG2146	nitrite reductase [NAD(P)H] activity
BAMY6639_13025	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BAMY6639_13030	COG0243	molybdopterin cofactor binding
BAMY6639_13035	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BAMY6639_13040	COG2223	nitrite transmembrane transporter activity
BAMY6639_13045	COG0523	cobalamin synthesis protein
BAMY6639_13050	COG1063	alcohol dehydrogenase
BAMY6639_13055	COG1714	RDD family
BAMY6639_13065	COG2723	6-phospho-beta-galactosidase activity
BAMY6639_13075	COG3209	COG3209 Rhs family protein
BAMY6639_13080	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BAMY6639_13085	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
BAMY6639_13090	COG1733	regulation of RNA biosynthetic process
BAMY6639_13095	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_13100	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_13105	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
BAMY6639_13125	COG0697	spore germination
BAMY6639_13130	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMY6639_13140	COG2364	Membrane
BAMY6639_13145	COG1126	abc transporter atp-binding protein
BAMY6639_13150	COG0765	amino acid transport
BAMY6639_13155	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMY6639_13160	COG0583	DNA-binding transcription factor activity
BAMY6639_13165	COG0163	prenyltransferase activity
BAMY6639_13170	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BAMY6639_13185	COG3104	oligopeptide transport
BAMY6639_13190	COG5434	Belongs to the glycosyl hydrolase 28 family
BAMY6639_13200	COG0697	spore germination
BAMY6639_13210	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BAMY6639_13225	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BAMY6639_13230	COG0765	amino acid transport
BAMY6639_13235	COG1126	abc transporter atp-binding protein
BAMY6639_13245	COG2079	MmgE PrpD family protein
BAMY6639_13250	COG1136	(ABC) transporter
BAMY6639_13255	COG0577	efflux transmembrane transporter activity
BAMY6639_13260	COG0745	RESPONSE REGULATOR receiver
BAMY6639_13265	COG5002	protein histidine kinase activity
BAMY6639_13265	COG3850	Histidine kinase
BAMY6639_13270	COG0457	Tetratricopeptide repeat
BAMY6639_13285	COG0527	aspartate kinase activity
BAMY6639_13290	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BAMY6639_13295	COG4605	iron ion homeostasis
BAMY6639_13300	COG4604	ABC transporter, ATP-binding protein
BAMY6639_13305	COG4607	ABC-type enterochelin transport system periplasmic component
BAMY6639_13310	COG2814	Major facilitator Superfamily
BAMY6639_13315	COG1309	transcriptional regulator
BAMY6639_13320	COG0778	Nitroreductase
BAMY6639_13325	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BAMY6639_13330	COG0640	Transcriptional regulator
BAMY6639_13335	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMY6639_13340	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BAMY6639_13345	COG1012	belongs to the aldehyde dehydrogenase family
BAMY6639_13355	COG4975	Glucose uptake
BAMY6639_13360	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_13365	COG4549	nuclear export factor GLE1
BAMY6639_13370	COG2372	response to copper ion
BAMY6639_13370	COG1276	copper resistance
BAMY6639_13375	COG1349	DNA-binding transcription factor activity
BAMY6639_13385	COG2213	PTS system mannitol-specific
BAMY6639_13390	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMY6639_13400	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BAMY6639_13410	COG0561	phosphatase activity
BAMY6639_13420	COG1914	H( )-stimulated, divalent metal cation uptake system
BAMY6639_13430	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BAMY6639_13435	COG1984	allophanate hydrolase subunit 2
BAMY6639_13440	COG1414	Transcriptional regulator
BAMY6639_13445	COG2755	lipolytic protein G-D-S-L family
BAMY6639_13455	COG2329	Antibiotic biosynthesis monooxygenase
BAMY6639_13460	COG0768	penicillin binding
BAMY6639_13465	COG4989	oxidoreductase activity
BAMY6639_13470	COG3711	transcriptional antiterminator
BAMY6639_13475	COG0318	PFAM AMP-dependent synthetase and ligase
BAMY6639_13480	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_13485	COG1917	Cupin 2, conserved barrel domain protein
BAMY6639_13490	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMY6639_13495	COG3871	stress protein (general stress protein 26)
BAMY6639_13505	COG2801	Transposase and inactivated derivatives
BAMY6639_13515	COG2814	Major facilitator Superfamily
BAMY6639_13520	COG1522	sequence-specific DNA binding
BAMY6639_13525	COG0551	DNA topoisomerase type I activity
BAMY6639_13525	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BAMY6639_13530	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BAMY6639_13535	COG3706	GGDEF domain
BAMY6639_13540	COG5298	Protein conserved in bacteria
BAMY6639_13545	COG1215	transferase activity, transferring glycosyl groups
BAMY6639_13555	COG0531	amino acid
BAMY6639_13560	COG0494	nUDIX hydrolase
BAMY6639_13565	COG0028	Belongs to the TPP enzyme family
BAMY6639_13570	COG3409	Peptidoglycan-binding domain 1 protein
BAMY6639_13570	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAMY6639_13570	COG1388	LysM domain
BAMY6639_13585	COG0457	Tetratricopeptide repeat
BAMY6639_13620	COG1914	H( )-stimulated, divalent metal cation uptake system
BAMY6639_13635	COG4876	unkown
BAMY6639_13645	COG2076	Multidrug Resistance protein
BAMY6639_13650	COG2217	Heavy metal translocating P-type atpase
BAMY6639_13655	COG3729	General stress protein
BAMY6639_13660	COG0662	Cupin 2, conserved barrel domain protein
BAMY6639_13665	COG2329	Antibiotic biosynthesis monooxygenase
BAMY6639_13670	COG3546	catalase activity
BAMY6639_13675	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BAMY6639_13680	COG3290	protein histidine kinase activity
BAMY6639_13685	COG4565	transcriptional regulatory protein
BAMY6639_13690	COG1301	dicarboxylic acid transport
BAMY6639_13695	COG0628	permease
BAMY6639_13700	COG1131	(ABC) transporter
BAMY6639_13705	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BAMY6639_13715	COG1960	acyl-CoA dehydrogenase activity
BAMY6639_13730	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BAMY6639_13735	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMY6639_13745	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BAMY6639_13755	COG0513	Belongs to the DEAD box helicase family
BAMY6639_13760	COG3402	PFAM membrane-flanked domain
BAMY6639_13765	COG3428	Bacterial PH domain
BAMY6639_13770	COG0705	Rhomboid family
BAMY6639_13780	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BAMY6639_13785	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BAMY6639_13790	COG0864	Transcriptional regulator
BAMY6639_13795	COG2337	Toxic component of a toxin-antitoxin (TA) module
BAMY6639_13800	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMY6639_13805	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMY6639_13810	COG2172	sigma factor antagonist activity
BAMY6639_13815	COG2208	phosphoserine phosphatase activity
BAMY6639_13820	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMY6639_13830	COG1191	sigma factor activity
BAMY6639_13835	COG2208	phosphoserine phosphatase activity
BAMY6639_13840	COG2183	response to ionizing radiation
BAMY6639_13890	COG0741	lytic transglycosylase activity
BAMY6639_13890	COG0791	NLP P60 protein
BAMY6639_13905	COG5444	nuclease activity
BAMY6639_13910	COG2249	NAD(P)H dehydrogenase (quinone) activity
BAMY6639_13920	COG0477	Major facilitator Superfamily
BAMY6639_13925	COG1846	Transcriptional regulator
BAMY6639_13935	COG2030	dehydratase
BAMY6639_13945	COG1959	2 iron, 2 sulfur cluster binding
BAMY6639_13950	COG2910	NAD(P)H-binding
BAMY6639_13955	COG1278	Cold shock
BAMY6639_13960	COG1329	Transcriptional regulator
BAMY6639_13965	COG1794	racemase activity, acting on amino acids and derivatives
BAMY6639_13985	COG3621	Patatin-like phospholipase
BAMY6639_13995	COG0662	Cupin 2, conserved barrel domain protein
BAMY6639_14010	COG0277	FAD linked oxidase domain protein
BAMY6639_14035	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BAMY6639_14070	COG0351	phosphomethylpyrimidine kinase
BAMY6639_14090	COG1064	alcohol dehydrogenase
BAMY6639_14095	COG0789	Transcriptional regulator
BAMY6639_14105	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMY6639_14120	COG2814	Major facilitator Superfamily
BAMY6639_14125	COG1309	transcriptional regulator
BAMY6639_14130	COG0697	spore germination
BAMY6639_14135	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMY6639_14140	COG5577	PFAM Coat F domain
BAMY6639_14150	COG1063	alcohol dehydrogenase
BAMY6639_14155	COG5577	PFAM Coat F domain
BAMY6639_14170	COG4585	Histidine kinase
BAMY6639_14175	COG2197	response regulator
BAMY6639_14180	COG2409	Drug exporters of the RND superfamily
BAMY6639_14185	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BAMY6639_14195	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMY6639_14200	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMY6639_14210	COG2814	Major facilitator Superfamily
BAMY6639_14215	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BAMY6639_14225	COG0730	response to heat
BAMY6639_14230	COG0456	acetyltransferase
BAMY6639_14235	COG4978	Transcriptional regulator
BAMY6639_14235	COG0789	Transcriptional regulator
BAMY6639_14240	COG1051	belongs to the nudix hydrolase family
BAMY6639_14245	COG2226	methyltransferase
BAMY6639_14265	COG1819	glycosyl
BAMY6639_14280	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAMY6639_14290	COG1388	LysM domain
BAMY6639_14295	COG2814	Major facilitator Superfamily
BAMY6639_14300	COG2188	Transcriptional regulator
BAMY6639_14305	COG2186	Transcriptional regulator
BAMY6639_14310	COG2807	transmembrane transport
BAMY6639_14315	COG2076	Multidrug Resistance protein
BAMY6639_14320	COG2076	Multidrug Resistance protein
BAMY6639_14325	COG1309	transcriptional regulator
BAMY6639_14330	COG0531	amino acid
BAMY6639_14340	COG3832	glyoxalase III activity
BAMY6639_14345	COG0604	alcohol dehydrogenase
BAMY6639_14350	COG2814	Major facilitator Superfamily
BAMY6639_14395	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
BAMY6639_14400	COG0802	atpase or kinase
BAMY6639_14405	COG1214	PFAM Peptidase M22, glycoprotease
BAMY6639_14410	COG0456	acetyltransferase
BAMY6639_14415	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BAMY6639_14420	COG0488	(ABC) transporter
BAMY6639_14435	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BAMY6639_14440	COG0805	protein transport
BAMY6639_14450	COG1266	CAAX protease self-immunity
BAMY6639_14455	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BAMY6639_14465	COG0745	RESPONSE REGULATOR receiver
BAMY6639_14480	COG3290	protein histidine kinase activity
BAMY6639_14560	COG0457	Tetratricopeptide repeat
BAMY6639_14565	COG1063	alcohol dehydrogenase
BAMY6639_14570	COG2211	Major facilitator Superfamily
BAMY6639_14575	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BAMY6639_14585	COG1842	Phage shock protein A
BAMY6639_14590	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BAMY6639_14595	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
BAMY6639_14600	COG4260	virion core protein, lumpy skin disease virus
BAMY6639_14605	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BAMY6639_14605	COG2755	lipolytic protein G-D-S-L family
BAMY6639_14615	COG1595	DNA-templated transcription, initiation
BAMY6639_14620	COG1063	alcohol dehydrogenase
BAMY6639_14625	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BAMY6639_14630	COG0823	Involved in the tonB-independent uptake of proteins
BAMY6639_14645	COG2132	Multicopper oxidase
BAMY6639_14650	COG1113	amino acid transport
BAMY6639_14660	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BAMY6639_14665	COG0714	Associated with various cellular activities
BAMY6639_14670	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
BAMY6639_14675	COG1305	Transglutaminase-like
BAMY6639_14690	COG0519	Catalyzes the synthesis of GMP from XMP
BAMY6639_14690	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BAMY6639_14710	COG2252	PERMEase
BAMY6639_14715	COG3064	Membrane
BAMY6639_14735	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BAMY6639_14740	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BAMY6639_14745	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BAMY6639_14750	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BAMY6639_14755	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BAMY6639_14770	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BAMY6639_14780	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BAMY6639_14785	COG0138	bifunctional purine biosynthesis protein purh
BAMY6639_14790	COG0151	Belongs to the GarS family
BAMY6639_14800	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
BAMY6639_14805	COG1470	cell adhesion involved in biofilm formation
BAMY6639_14810	COG4496	protein, YerC YecD
BAMY6639_14815	COG0069	glutamate synthase activity
BAMY6639_14830	COG0210	DNA helicase
BAMY6639_14840	COG4851	CamS sex pheromone cAM373 precursor
BAMY6639_14845	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BAMY6639_14850	COG1285	pathogenesis
BAMY6639_14855	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAMY6639_14875	COG1309	transcriptional regulator
BAMY6639_14880	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BAMY6639_14885	COG1597	lipid kinase activity
BAMY6639_14890	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BAMY6639_14900	COG1131	(ABC) transporter
BAMY6639_14915	COG5444	nuclease activity
BAMY6639_14940	COG3546	catalase activity
BAMY6639_14945	COG0454	-acetyltransferase
BAMY6639_14955	COG2323	membrane
BAMY6639_14960	COG2329	Antibiotic biosynthesis monooxygenase
BAMY6639_14965	COG0346	lactoylglutathione lyase activity
BAMY6639_14970	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMY6639_14975	COG5583	Uncharacterized small protein (DUF2292)
BAMY6639_14980	COG0196	riboflavin kinase activity
BAMY6639_14985	COG0670	Belongs to the BI1 family
BAMY6639_14990	COG1846	Transcriptional regulator
BAMY6639_14995	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BAMY6639_15005	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BAMY6639_15005	COG2124	cytochrome p450
BAMY6639_15015	COG1368	sulfuric ester hydrolase activity
BAMY6639_15020	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BAMY6639_15025	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAMY6639_15030	COG1442	glycosyl transferase family 8
BAMY6639_15035	COG1216	Glycosyl transferase, family 2
BAMY6639_15040	COG1442	glycosyl transferase family 8
BAMY6639_15045	COG2223	nitrite transmembrane transporter activity
BAMY6639_15050	COG0531	amino acid
BAMY6639_15055	COG1012	belongs to the aldehyde dehydrogenase family
BAMY6639_15060	COG0840	transmembrane signaling receptor activity
BAMY6639_15065	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_15070	COG0463	Glycosyl transferase, family 2
BAMY6639_15070	COG0457	Tetratricopeptide repeat
BAMY6639_15075	COG0488	(ABC) transporter
BAMY6639_15080	COG0789	Transcriptional regulator
BAMY6639_15085	COG2814	Major facilitator Superfamily
BAMY6639_15090	COG0488	(ABC) transporter
BAMY6639_15095	COG0513	Belongs to the DEAD box helicase family
BAMY6639_15100	COG0456	acetyltransferase
BAMY6639_15105	COG2130	NADP-dependent
BAMY6639_15120	COG3866	Pectate lyase
BAMY6639_15125	COG0471	metal ion transport
BAMY6639_15155	COG2972	Histidine kinase
BAMY6639_15155	COG0745	RESPONSE REGULATOR receiver
BAMY6639_15160	COG3279	Response regulator of the LytR AlgR family
BAMY6639_15170	COG3764	Sortase (surface protein transpeptidase)
BAMY6639_15175	COG3290	protein histidine kinase activity
BAMY6639_15180	COG4565	transcriptional regulatory protein
BAMY6639_15185	COG3181	Tripartite tricarboxylate transporter family receptor
BAMY6639_15190	COG2851	Citrate transporter
BAMY6639_15195	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BAMY6639_15200	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
BAMY6639_15210	COG2258	MOSC domain
BAMY6639_15230	COG0024	Methionine aminopeptidase
BAMY6639_15235	COG1263	PTS System
BAMY6639_15235	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMY6639_15245	COG1368	sulfuric ester hydrolase activity
BAMY6639_15255	COG0071	Belongs to the small heat shock protein (HSP20) family
BAMY6639_15270	COG1263	PTS System
BAMY6639_15270	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMY6639_15275	COG0366	Alpha amylase catalytic
BAMY6639_15280	COG2188	Transcriptional regulator
BAMY6639_15285	COG0778	Nitroreductase
BAMY6639_15300	COG0737	Belongs to the 5'-nucleotidase family
BAMY6639_15305	COG0693	protein deglycase activity
BAMY6639_15310	COG1609	Transcriptional regulator
BAMY6639_15315	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BAMY6639_15325	COG2814	Major facilitator Superfamily
BAMY6639_15335	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BAMY6639_15340	COG4980	gas vesicle protein
BAMY6639_15345	COG1295	ribonuclease BN
BAMY6639_15355	COG0477	Major facilitator Superfamily
BAMY6639_15360	COG0387	Pfam Sodium calcium exchanger
BAMY6639_15370	COG0668	transmembrane transport
BAMY6639_15375	COG0535	radical SAM domain protein
BAMY6639_15385	COG0726	polysaccharide deacetylase
BAMY6639_15390	COG2084	Dehydrogenase
BAMY6639_15400	COG0598	Magnesium transport protein CorA
BAMY6639_15405	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BAMY6639_15410	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BAMY6639_15420	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BAMY6639_15425	COG4637	Psort location Cytoplasmic, score
BAMY6639_15430	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BAMY6639_15435	COG0022	dehydrogenase e1 component
BAMY6639_15440	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAMY6639_15445	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BAMY6639_15450	COG3284	Transcriptional regulator
BAMY6639_15460	COG1486	melibiose metabolic process
BAMY6639_15465	COG1737	Transcriptional regulator
BAMY6639_15475	COG5434	Belongs to the glycosyl hydrolase 28 family
BAMY6639_15480	COG1132	(ABC) transporter
BAMY6639_15485	COG1132	(ABC) transporter
BAMY6639_15490	COG2259	Doxx family
BAMY6639_15495	COG2514	catechol 2,3-dioxygenase activity
BAMY6639_15510	COG1695	Transcriptional regulator
BAMY6639_15520	COG2249	NAD(P)H dehydrogenase (quinone) activity
BAMY6639_15525	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
BAMY6639_15530	COG3848	Pyruvate phosphate dikinase
BAMY6639_15530	COG0574	Belongs to the PEP-utilizing enzyme family
BAMY6639_15535	COG2732	(Barnase) inhibitor
BAMY6639_15540	COG2318	DinB family
BAMY6639_15545	COG2814	Major facilitator Superfamily
BAMY6639_15550	COG1846	Transcriptional regulator
BAMY6639_15555	COG0392	lysyltransferase activity
BAMY6639_15555	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BAMY6639_15560	COG0384	phenazine biosynthesis protein PhzF
BAMY6639_15565	COG0778	Nitroreductase
BAMY6639_15580	COG1090	epimerase
BAMY6639_15595	COG2814	Major facilitator Superfamily
BAMY6639_15605	COG3591	Belongs to the peptidase S1B family
BAMY6639_15625	COG3103	Sh3 type 3 domain protein
BAMY6639_15630	COG5658	integral membrane protein
BAMY6639_15635	COG0596	Alpha beta hydrolase
BAMY6639_15640	COG0463	Glycosyl transferase, family 2
BAMY6639_15645	COG4485	Bacterial membrane protein, YfhO
BAMY6639_15650	COG1988	membrane-bound metal-dependent
BAMY6639_15655	COG1194	a g-specific adenine glycosylase
BAMY6639_15665	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_15685	COG1132	(ABC) transporter
BAMY6639_15690	COG4129	membrane
BAMY6639_15700	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BAMY6639_15705	COG0735	belongs to the Fur family
BAMY6639_15825	COG0277	FAD linked oxidase domain protein
BAMY6639_15835	COG0747	negative chemotaxis
BAMY6639_15840	COG0601	transmembrane transport
BAMY6639_15845	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAMY6639_15850	COG0444	Belongs to the ABC transporter superfamily
BAMY6639_15855	COG4608	Belongs to the ABC transporter superfamily
BAMY6639_15860	COG0753	catalase activity
BAMY6639_15870	COG1116	anion transmembrane transporter activity
BAMY6639_15880	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BAMY6639_15910	COG3382	B3 4 domain protein
BAMY6639_15915	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BAMY6639_15925	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BAMY6639_15930	COG0789	Transcriptional regulator
BAMY6639_15935	COG1664	Polymer-forming cytoskeletal
BAMY6639_15940	COG1664	Polymer-forming cytoskeletal
BAMY6639_15950	COG2766	serine protein kinase
BAMY6639_15960	COG1846	Transcriptional regulator
BAMY6639_15965	COG1566	PFAM secretion protein HlyD family protein
BAMY6639_15970	COG2814	Major facilitator Superfamily
BAMY6639_15975	COG0655	NAD(P)H dehydrogenase (quinone) activity
BAMY6639_15990	COG1725	Transcriptional regulator
BAMY6639_15995	COG1131	(ABC) transporter
BAMY6639_16000	COG1131	(ABC) transporter
BAMY6639_16005	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BAMY6639_16010	COG1278	Cold shock
BAMY6639_16015	COG1464	Belongs to the NlpA lipoprotein family
BAMY6639_16020	COG3706	GGDEF domain
BAMY6639_16025	COG1823	symporter activity
BAMY6639_16045	COG5577	PFAM Coat F domain
BAMY6639_16050	COG4085	toxin activity
BAMY6639_16050	COG1525	nuclease
BAMY6639_16050	COG0737	Belongs to the 5'-nucleotidase family
BAMY6639_16055	COG3764	Sortase (surface protein transpeptidase)
BAMY6639_16060	COG0564	pseudouridine synthase activity
BAMY6639_16070	COG0517	IMP dehydrogenase activity
BAMY6639_16075	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BAMY6639_16080	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BAMY6639_16080	COG3153	acetyltransferase
BAMY6639_16090	COG2801	Transposase and inactivated derivatives
BAMY6639_16095	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BAMY6639_16100	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
BAMY6639_16105	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BAMY6639_16115	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BAMY6639_16120	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BAMY6639_16125	COG2197	response regulator
BAMY6639_16130	COG0431	NADPH-dependent FMN reductase
BAMY6639_16145	COG1388	LysM domain
BAMY6639_16145	COG0791	NLP P60 protein
BAMY6639_16150	COG1959	2 iron, 2 sulfur cluster binding
BAMY6639_16160	COG0668	transmembrane transport
BAMY6639_16165	COG2719	SpoVR family
BAMY6639_16170	COG1785	Belongs to the alkaline phosphatase family
BAMY6639_16175	COG0791	NLP P60 protein
BAMY6639_16175	COG1388	LysM domain
BAMY6639_16180	COG0583	DNA-binding transcription factor activity
BAMY6639_16185	COG0372	Belongs to the citrate synthase family
BAMY6639_16190	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_16195	COG0531	amino acid
BAMY6639_16200	COG0733	neurotransmitter:sodium symporter activity
BAMY6639_16215	COG1595	DNA-templated transcription, initiation
BAMY6639_16220	COG0204	Acyl-transferase
BAMY6639_16225	COG1253	flavin adenine dinucleotide binding
BAMY6639_16230	COG0789	Transcriptional regulator
BAMY6639_16240	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BAMY6639_16245	COG1253	flavin adenine dinucleotide binding
BAMY6639_16250	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BAMY6639_16255	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BAMY6639_16260	COG0584	glycerophosphoryl diester phosphodiesterase
BAMY6639_16270	COG0668	transmembrane transport
BAMY6639_16275	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BAMY6639_16280	COG0726	polysaccharide deacetylase
BAMY6639_16285	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BAMY6639_16290	COG3226	Transcriptional regulator
BAMY6639_16300	COG0589	response to stress
BAMY6639_16315	COG1132	(ABC) transporter
BAMY6639_16320	COG1132	(ABC) transporter
BAMY6639_16325	COG0702	epimerase
BAMY6639_16345	COG0189	ligase activity
BAMY6639_16350	COG0189	ligase activity
BAMY6639_16365	COG4335	DNA alkylation repair
BAMY6639_16370	COG0561	phosphatase activity
BAMY6639_16375	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BAMY6639_16385	COG0475	glutathione-regulated potassium exporter activity
BAMY6639_16390	COG0490	domain, Protein
BAMY6639_16400	COG1024	Enoyl-CoA hydratase
BAMY6639_16410	COG4152	abc transporter atp-binding protein
BAMY6639_16415	COG1668	transmembrane transport
BAMY6639_16420	COG0420	3'-5' exonuclease activity
BAMY6639_16425	COG4717	serine-type aminopeptidase activity
BAMY6639_16440	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BAMY6639_16475	COG4980	gas vesicle protein
BAMY6639_16490	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BAMY6639_16495	COG0537	adenosine 5'-monophosphoramidase activity
BAMY6639_16500	COG1131	(ABC) transporter
BAMY6639_16505	COG4473	ABC transporter
BAMY6639_16515	COG1473	amidohydrolase
BAMY6639_16520	COG3069	C4-dicarboxylate transmembrane transporter activity
BAMY6639_16525	COG2329	Antibiotic biosynthesis monooxygenase
BAMY6639_16530	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BAMY6639_16550	COG1309	transcriptional regulator
BAMY6639_16555	COG1511	domain protein
BAMY6639_16560	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAMY6639_16570	COG1363	Peptidase, m42
BAMY6639_16575	COG1301	dicarboxylic acid transport
BAMY6639_16585	COG1234	tRNA 3'-trailer cleavage
BAMY6639_16590	COG0095	Lipoate-protein ligase
BAMY6639_16595	COG0702	epimerase
BAMY6639_16600	COG0318	PFAM AMP-dependent synthetase and ligase
BAMY6639_16610	COG0501	Belongs to the peptidase M48B family
BAMY6639_16615	COG1404	Belongs to the peptidase S8 family
BAMY6639_16625	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BAMY6639_16630	COG0406	alpha-ribazole phosphatase activity
BAMY6639_16635	COG0183	Belongs to the thiolase family
BAMY6639_16640	COG0318	PFAM AMP-dependent synthetase and ligase
BAMY6639_16645	COG1268	BioY protein
BAMY6639_16650	COG0840	transmembrane signaling receptor activity
BAMY6639_16655	COG0723	plastoquinol--plastocyanin reductase activity
BAMY6639_16655	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAMY6639_16660	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_16670	COG4903	ComK protein
BAMY6639_16680	COG5646	InterPro IPR014922
BAMY6639_16705	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BAMY6639_16720	COG0398	Pfam SNARE associated Golgi protein
BAMY6639_16725	COG0681	Belongs to the peptidase S26 family
BAMY6639_16730	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BAMY6639_16735	COG1846	Transcriptional regulator
BAMY6639_16740	COG3180	Ammonia monooxygenase
BAMY6639_16745	COG2814	Major facilitator Superfamily
BAMY6639_16755	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
BAMY6639_16775	COG0420	3'-5' exonuclease activity
BAMY6639_16780	COG0419	ATPase involved in DNA repair
BAMY6639_16785	COG1403	HNH endonuclease
BAMY6639_16825	COG0179	Fumarylacetoacetate (FAA) hydrolase
BAMY6639_16840	COG0367	asparagine synthase
BAMY6639_16845	COG1562	ergosterol biosynthetic process
BAMY6639_16850	COG0534	Mate efflux family protein
BAMY6639_16855	COG2207	Transcriptional regulator
BAMY6639_16855	COG1917	Cupin 2, conserved barrel domain protein
BAMY6639_16865	COG1279	arginine transmembrane transporter activity
BAMY6639_16870	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BAMY6639_16875	COG1357	PFAM Pentapeptide repeats (8 copies)
BAMY6639_16880	COG2153	protein acetylation
BAMY6639_16885	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BAMY6639_16885	COG0646	methionine synthase
BAMY6639_16895	COG2996	Protein conserved in bacteria
BAMY6639_16905	COG0840	transmembrane signaling receptor activity
BAMY6639_16910	COG2124	cytochrome p450
BAMY6639_16920	COG1307	EDD domain protein, DegV family
BAMY6639_16925	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BAMY6639_16945	COG0561	phosphatase activity
BAMY6639_16950	COG1073	alpha beta
BAMY6639_16955	COG2151	metal-sulfur cluster biosynthetic enzyme
BAMY6639_16990	COG3316	Transposase and inactivated derivatives
BAMY6639_16995	COG0277	FAD linked oxidase domain protein
BAMY6639_17000	COG2271	Major facilitator Superfamily
BAMY6639_17020	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BAMY6639_17025	COG0505	Belongs to the CarA family
BAMY6639_17030	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BAMY6639_17035	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BAMY6639_17050	COG2801	Transposase and inactivated derivatives
BAMY6639_17065	COG2267	carboxylic ester hydrolase activity
BAMY6639_17075	COG1744	ABC transporter substrate-binding protein PnrA-like
BAMY6639_17090	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BAMY6639_17095	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BAMY6639_17100	COG5504	Zn-dependent protease
BAMY6639_17105	COG0444	Belongs to the ABC transporter superfamily
BAMY6639_17110	COG4608	Belongs to the ABC transporter superfamily
BAMY6639_17115	COG2801	Transposase and inactivated derivatives
BAMY6639_17130	COG0601	transmembrane transport
BAMY6639_17135	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAMY6639_17145	COG0180	Tryptophanyl-tRNA synthetase
BAMY6639_17150	COG4166	transmembrane transport
BAMY6639_17155	COG0601	transmembrane transport
BAMY6639_17160	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAMY6639_17165	COG0444	Belongs to the ABC transporter superfamily
BAMY6639_17170	COG4608	Belongs to the ABC transporter superfamily
BAMY6639_17180	COG0456	acetyltransferase
BAMY6639_17185	COG1393	Belongs to the ArsC family
BAMY6639_17190	COG0861	Integral membrane protein TerC family
BAMY6639_17195	COG4862	establishment of competence for transformation
BAMY6639_17205	COG4469	Competence protein
BAMY6639_17210	COG1164	Oligoendopeptidase f
BAMY6639_17225	COG2346	COG2346, Truncated hemoglobins
BAMY6639_17230	COG0741	lytic transglycosylase activity
BAMY6639_17235	COG4116	CYTH
BAMY6639_17245	COG2357	RelA SpoT domain protein
BAMY6639_17250	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BAMY6639_17255	COG0564	pseudouridine synthase activity
BAMY6639_17265	COG0569	domain protein
BAMY6639_17265	COG0475	glutathione-regulated potassium exporter activity
BAMY6639_17270	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BAMY6639_17275	COG0352	thiamine-phosphate diphosphorylase activity
BAMY6639_17280	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BAMY6639_17285	COG2104	thiamine diphosphate biosynthetic process
BAMY6639_17295	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAMY6639_17300	COG0351	phosphomethylpyrimidine kinase
BAMY6639_17305	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BAMY6639_17365	COG0210	DNA helicase
BAMY6639_17385	COG1131	(ABC) transporter
BAMY6639_17395	COG2153	protein acetylation
BAMY6639_17405	COG2382	esterase
BAMY6639_17415	COG0626	cystathionine gamma-synthase activity
BAMY6639_17420	COG0626	cystathionine gamma-synthase activity
BAMY6639_17450	COG5444	nuclease activity
BAMY6639_17505	COG5444	nuclease activity
BAMY6639_17535	COG0537	adenosine 5'-monophosphoramidase activity
BAMY6639_17540	COG0135	phosphoribosylanthranilate isomerase activity
BAMY6639_17555	COG2367	Beta-lactamase
BAMY6639_17560	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BAMY6639_17565	COG0477	Major facilitator Superfamily
BAMY6639_17570	COG1846	Transcriptional regulator
BAMY6639_17580	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
BAMY6639_17585	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BAMY6639_17590	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BAMY6639_17595	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMY6639_17595	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BAMY6639_17600	COG1447	Phosphotransferase system cellobiose-specific component IIA
BAMY6639_17610	COG1349	DNA-binding transcription factor activity
BAMY6639_17635	COG1285	pathogenesis
BAMY6639_17650	COG2205	protein histidine kinase activity
BAMY6639_17660	COG3383	formate dehydrogenase (NAD+) activity
BAMY6639_17665	COG2427	Protein of unknown function (DUF1641)
BAMY6639_17670	COG2124	cytochrome p450
BAMY6639_17675	COG1819	glycosyl
BAMY6639_17685	COG1587	Uroporphyrinogen-III synthase
BAMY6639_17690	COG0390	transport system, permease component
BAMY6639_17695	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BAMY6639_17700	COG0697	spore germination
BAMY6639_17705	COG4297	protein containing double-stranded beta helix domain
BAMY6639_17720	COG1252	NADH dehydrogenase
BAMY6639_17730	COG2211	Major facilitator Superfamily
BAMY6639_17735	COG1609	Transcriptional regulator
BAMY6639_17740	COG0246	Mannitol dehydrogenase
BAMY6639_17745	COG2721	sulfolactate sulfo-lyase activity
BAMY6639_17750	COG0745	RESPONSE REGULATOR receiver
BAMY6639_17755	COG2205	protein histidine kinase activity
BAMY6639_17755	COG2770	Histidine kinase
BAMY6639_17760	COG1121	(ABC) transporter
BAMY6639_17770	COG2801	Transposase and inactivated derivatives
BAMY6639_17780	COG0730	response to heat
BAMY6639_17785	COG2318	DinB family
BAMY6639_17790	COG0457	Tetratricopeptide repeat
BAMY6639_17800	COG3409	Peptidoglycan-binding domain 1 protein
BAMY6639_17800	COG1388	LysM domain
BAMY6639_17800	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAMY6639_17810	COG4195	phage-related replication protein
BAMY6639_17815	COG3546	catalase activity
BAMY6639_17820	COG2856	Zn peptidase
BAMY6639_17825	COG1396	sequence-specific DNA binding
BAMY6639_17835	COG1522	sequence-specific DNA binding
BAMY6639_17840	COG1484	DNA-dependent DNA replication
BAMY6639_17860	COG1595	DNA-templated transcription, initiation
BAMY6639_17865	COG3728	DNA packaging
BAMY6639_17865	COG5484	DNA packaging
BAMY6639_17870	COG1783	phage Terminase large subunit
BAMY6639_17875	COG5518	Phage portal protein
BAMY6639_17880	COG0338	D12 class N6 adenine-specific DNA methyltransferase
BAMY6639_17885	COG4653	Phage capsid family
BAMY6639_17935	COG5412	phage tail tape measure protein
BAMY6639_17935	COG5412	phage tail tape measure protein
BAMY6639_17935	COG3953	SLT domain
BAMY6639_17935	COG5412	phage tail tape measure protein
BAMY6639_17935	COG3953	SLT domain
BAMY6639_17935	COG3953	SLT domain
BAMY6639_17940	COG1652	LysM domain
BAMY6639_17945	COG4193	domain, Protein
BAMY6639_17960	COG3628	GPW Gp25 family protein
BAMY6639_17965	COG3299	homolog of phage Mu protein gp47
BAMY6639_17970	COG3778	Protein conserved in bacteria
BAMY6639_18010	COG3409	Peptidoglycan-binding domain 1 protein
BAMY6639_18010	COG5632	N-Acetylmuramoyl-L-alanine amidase
BAMY6639_18030	COG0306	phosphate transporter
BAMY6639_18035	COG1392	Phosphate transport regulator
BAMY6639_18045	COG0531	amino acid
BAMY6639_18050	COG0346	lactoylglutathione lyase activity
BAMY6639_18055	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BAMY6639_18060	COG0463	Glycosyl transferase, family 2
BAMY6639_18070	COG2801	Transposase and inactivated derivatives
BAMY6639_18080	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BAMY6639_18085	COG0477	Major facilitator Superfamily
BAMY6639_18090	COG2362	D-Aminopeptidase
BAMY6639_18095	COG0601	transmembrane transport
BAMY6639_18100	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BAMY6639_18105	COG0444	Belongs to the ABC transporter superfamily
BAMY6639_18110	COG4166	transmembrane transport
BAMY6639_18115	COG1619	proteins homologs of microcin C7 resistance protein MccF
BAMY6639_18120	COG4948	Mandelate Racemase Muconate Lactonizing
BAMY6639_18125	COG0791	NLP P60 protein
BAMY6639_18130	COG4608	Belongs to the ABC transporter superfamily
BAMY6639_18135	COG2706	6-phosphogluconolactonase activity
BAMY6639_18140	COG1834	amidinotransferase
BAMY6639_18145	COG1607	acyl-coa hydrolase
BAMY6639_18150	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BAMY6639_18155	COG2076	Multidrug Resistance protein
BAMY6639_18160	COG2076	Multidrug Resistance protein
BAMY6639_18165	COG0788	formyltetrahydrofolate deformylase activity
BAMY6639_18170	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BAMY6639_18180	COG1764	response to oxidative stress
BAMY6639_18185	COG1846	Transcriptional regulator
BAMY6639_18190	COG1764	response to oxidative stress
BAMY6639_18205	COG0463	Glycosyl transferase, family 2
BAMY6639_18205	COG0457	Tetratricopeptide repeat
BAMY6639_18215	COG2814	Major facilitator Superfamily
BAMY6639_18230	COG1404	Belongs to the peptidase S8 family
BAMY6639_18235	COG1366	Belongs to the anti-sigma-factor antagonist family
BAMY6639_18240	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BAMY6639_18245	COG1122	ATPase activity
BAMY6639_18250	COG4721	ABC-type cobalt transport system, permease component
BAMY6639_18260	COG3858	chitin binding
BAMY6639_18260	COG1388	LysM domain
BAMY6639_18275	COG2239	Acts as a magnesium transporter
BAMY6639_18280	COG0789	Transcriptional regulator
BAMY6639_18295	COG1846	Transcriptional regulator
BAMY6639_18300	COG0726	polysaccharide deacetylase
BAMY6639_18305	COG1793	dna ligase
BAMY6639_18305	COG3285	dna ligase
BAMY6639_18310	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
BAMY6639_18315	COG0586	Pfam SNARE associated Golgi protein
BAMY6639_18320	COG0861	Integral membrane protein TerC family
BAMY6639_18325	COG1191	sigma factor activity
BAMY6639_18350	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BAMY6639_18355	COG2323	membrane
BAMY6639_18365	COG3594	Acyltransferase
BAMY6639_18370	COG5002	protein histidine kinase activity
BAMY6639_18375	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BAMY6639_18395	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BAMY6639_18400	COG0436	Aminotransferase
BAMY6639_18435	COG3852	Histidine kinase
BAMY6639_18440	COG1846	Transcriptional regulator
BAMY6639_18445	COG1360	Flagellar Motor Protein
BAMY6639_18450	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BAMY6639_18455	COG0542	response to heat
BAMY6639_18460	COG3949	Membrane
BAMY6639_18475	COG0720	synthase
BAMY6639_18480	COG0602	queuosine metabolic process
BAMY6639_18490	COG1733	regulation of RNA biosynthetic process
BAMY6639_18495	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_18500	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BAMY6639_18505	COG1388	LysM domain
BAMY6639_18505	COG4641	Protein conserved in bacteria
BAMY6639_18510	COG1388	LysM domain
BAMY6639_18515	COG3858	chitin binding
BAMY6639_18525	COG4873	Protein conserved in bacteria
BAMY6639_18535	COG3773	Cell wall hydrolase
BAMY6639_18540	COG2244	polysaccharide biosynthetic process
BAMY6639_18545	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMY6639_18550	COG2217	Heavy metal translocating P-type atpase
BAMY6639_18555	COG0006	proline dipeptidase activity
BAMY6639_18565	COG1609	Transcriptional regulator
BAMY6639_18570	COG3711	transcriptional antiterminator
BAMY6639_18575	COG2190	(PTS) system
BAMY6639_18575	COG1263	PTS System
BAMY6639_18575	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BAMY6639_18580	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMY6639_18585	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BAMY6639_18595	COG1533	DNA photolyase activity
BAMY6639_18600	COG0840	transmembrane signaling receptor activity
BAMY6639_18605	COG2084	Dehydrogenase
BAMY6639_18610	COG2340	Cysteine-rich secretory protein family
BAMY6639_18615	COG0768	penicillin binding
BAMY6639_18620	COG4191	Histidine kinase
BAMY6639_18625	COG0436	Aminotransferase
BAMY6639_18635	COG0835	chemotaxis
BAMY6639_18635	COG0784	Response regulator, receiver
BAMY6639_18645	COG2814	Major facilitator Superfamily
BAMY6639_18650	COG1376	ErfK ybiS ycfS ynhG family protein
BAMY6639_18655	COG1408	metallophosphoesterase
BAMY6639_18660	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_18670	COG2200	EAL domain
BAMY6639_18675	COG4703	Protein of unknown function (DUF1797)
BAMY6639_18680	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
BAMY6639_18690	COG0517	IMP dehydrogenase activity
BAMY6639_18695	COG0583	DNA-binding transcription factor activity
BAMY6639_18700	COG0716	FMN binding
BAMY6639_18710	COG0716	FMN binding
BAMY6639_18735	COG0668	transmembrane transport
BAMY6639_18740	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMY6639_18760	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BAMY6639_18765	COG0303	'Molybdopterin
BAMY6639_18770	COG1763	Mo-molybdopterin cofactor biosynthetic process
BAMY6639_18775	COG0314	molybdopterin synthase activity
BAMY6639_18780	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BAMY6639_18790	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BAMY6639_18795	COG1136	(ABC) transporter
BAMY6639_18800	COG0577	efflux transmembrane transporter activity
BAMY6639_18805	COG1349	DNA-binding transcription factor activity
BAMY6639_18810	COG1105	Belongs to the carbohydrate kinase PfkB family
BAMY6639_18815	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BAMY6639_18815	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BAMY6639_18815	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BAMY6639_18820	COG0681	Belongs to the peptidase S26 family
BAMY6639_18830	COG0488	(ABC) transporter
BAMY6639_18835	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BAMY6639_18840	COG2309	aminopeptidase activity
BAMY6639_18850	COG1077	Cell shape determining protein MreB Mrl
BAMY6639_18860	COG2002	toxin-antitoxin pair type II binding
BAMY6639_18865	COG3852	Histidine kinase
BAMY6639_18870	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
BAMY6639_18870	COG2105	PFAM AIG2 family protein
BAMY6639_18875	COG0569	domain protein
BAMY6639_18885	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BAMY6639_18895	COG0561	phosphatase activity
BAMY6639_18900	COG0242	peptide deformylase activity
BAMY6639_18910	COG0497	DNA recombination
BAMY6639_18925	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_18925	COG4221	oxidoreductase activity
BAMY6639_18925	COG3321	synthase
BAMY6639_18925	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_18930	COG0300	oxidoreductase activity
BAMY6639_18930	COG3321	synthase
BAMY6639_18930	COG4221	oxidoreductase activity
BAMY6639_18930	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMY6639_18935	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_18935	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_18935	COG3321	synthase
BAMY6639_18935	COG4221	oxidoreductase activity
BAMY6639_18940	COG0318	PFAM AMP-dependent synthetase and ligase
BAMY6639_18940	COG3321	synthase
BAMY6639_18940	COG0300	oxidoreductase activity
BAMY6639_18940	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_18940	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_18945	COG3321	synthase
BAMY6639_18945	COG0300	oxidoreductase activity
BAMY6639_18945	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMY6639_18945	COG4221	oxidoreductase activity
BAMY6639_18950	COG4221	oxidoreductase activity
BAMY6639_18950	COG3321	synthase
BAMY6639_18950	COG0300	oxidoreductase activity
BAMY6639_18950	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMY6639_18955	COG4221	oxidoreductase activity
BAMY6639_18955	COG3321	synthase
BAMY6639_18955	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_18955	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_18960	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BAMY6639_18965	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BAMY6639_18970	COG0022	dehydrogenase e1 component
BAMY6639_18975	COG0508	dehydrogenase complex catalyzes the overall conversion of
BAMY6639_18980	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BAMY6639_18985	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BAMY6639_18995	COG1982	Orn Lys Arg decarboxylase major
BAMY6639_19015	COG0483	inositol monophosphate 1-phosphatase activity
BAMY6639_19025	COG3227	Zinc metalloprotease (Elastase)
BAMY6639_19040	COG1595	DNA-templated transcription, initiation
BAMY6639_19070	COG4896	Protein conserved in bacteria
BAMY6639_19080	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BAMY6639_19085	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BAMY6639_19090	COG2066	Belongs to the glutaminase family
BAMY6639_19100	COG0772	Belongs to the SEDS family
BAMY6639_19105	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BAMY6639_19120	COG2010	Cytochrome c
BAMY6639_19120	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BAMY6639_19125	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BAMY6639_19130	COG1845	cytochrome c oxidase, subunit III
BAMY6639_19135	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BAMY6639_19140	COG3336	cytochrome c oxidase
BAMY6639_19150	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
BAMY6639_19155	COG2340	Cysteine-rich secretory protein family
BAMY6639_19170	COG3679	Belongs to the UPF0342 family
BAMY6639_19180	COG0742	ribosomal rna small subunit methyltransferase
BAMY6639_19190	COG3314	Sporulation integral membrane protein YlbJ
BAMY6639_19195	COG1752	Esterase of the alpha-beta hydrolase superfamily
BAMY6639_19200	COG3480	Lon protease (S16) C-terminal proteolytic domain
BAMY6639_19215	COG1399	metal-binding, possibly nucleic acid-binding protein
BAMY6639_19220	COG0333	Belongs to the bacterial ribosomal protein bL32 family
BAMY6639_19235	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BAMY6639_19255	COG4839	cell division protein FtsL
BAMY6639_19265	COG0768	penicillin binding
BAMY6639_19285	COG0772	Belongs to the SEDS family
BAMY6639_19300	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BAMY6639_19305	COG0849	cell division
BAMY6639_19310	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BAMY6639_19315	COG1404	Belongs to the peptidase S8 family
BAMY6639_19315	COG4412	M6 family metalloprotease domain protein
BAMY6639_19325	COG1191	sigma factor activity
BAMY6639_19330	COG1191	sigma factor activity
BAMY6639_19335	COG1119	ATPase activity
BAMY6639_19340	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BAMY6639_19345	COG1873	PFAM PRC-barrel domain
BAMY6639_19355	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BAMY6639_19365	COG0762	integral membrane protein
BAMY6639_19370	COG2302	S4 RNA-binding domain
BAMY6639_19375	COG3599	regulation of cell shape
BAMY6639_19385	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BAMY6639_19390	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BAMY6639_19400	COG0564	pseudouridine synthase activity
BAMY6639_19410	COG2233	PERMEase
BAMY6639_19420	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BAMY6639_19425	COG0505	Belongs to the CarA family
BAMY6639_19430	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BAMY6639_19445	COG0284	orotidine-5'-phosphate decarboxylase activity
BAMY6639_19450	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BAMY6639_19465	COG0306	phosphate transporter
BAMY6639_19480	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BAMY6639_19485	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
BAMY6639_19490	COG1648	precorrin-2 dehydrogenase activity
BAMY6639_19500	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BAMY6639_19505	COG1561	YicC-like family, N-terminal region
BAMY6639_19510	COG2052	Domain of unknown function (DUF370)
BAMY6639_19515	COG0194	GDP metabolic process
BAMY6639_19525	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BAMY6639_19530	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BAMY6639_19535	COG0242	peptide deformylase activity
BAMY6639_19545	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BAMY6639_19545	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BAMY6639_19555	COG0631	protein serine/threonine phosphatase activity
BAMY6639_19560	COG2815	serine threonine protein kinase
BAMY6639_19560	COG0515	serine threonine protein kinase
BAMY6639_19570	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BAMY6639_19575	COG1564	THIamine pyrophosphokinase
BAMY6639_19590	COG1302	Protein conserved in bacteria
BAMY6639_19595	COG1461	Dihydroxyacetone kinase
BAMY6639_19600	COG1760	l-serine dehydratase
BAMY6639_19605	COG1760	l-serine dehydratase
BAMY6639_19610	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BAMY6639_19625	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BAMY6639_19630	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_19635	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMY6639_19645	COG1196	nuclear chromosome segregation
BAMY6639_19650	COG0552	protein localization to endoplasmic reticulum
BAMY6639_19665	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BAMY6639_19675	COG1837	Belongs to the UPF0109 family
BAMY6639_19700	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BAMY6639_19715	COG2257	FlhB HrpN YscU SpaS Family
BAMY6639_19725	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BAMY6639_19730	COG0758	DNA mediated transformation
BAMY6639_19735	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BAMY6639_19745	COG4974	Belongs to the 'phage' integrase family
BAMY6639_19765	COG1815	bacterial-type flagellum-dependent cell motility
BAMY6639_19770	COG1558	bacterial-type flagellum-dependent cell motility
BAMY6639_19775	COG1677	Flagellar hook-basal body complex protein FliE
BAMY6639_19780	COG1766	The M ring may be actively involved in energy transduction
BAMY6639_19785	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAMY6639_19790	COG1317	bacterial-type flagellum organization
BAMY6639_19795	COG1157	protein secretion by the type III secretion system
BAMY6639_19800	COG2882	bacterial-type flagellum organization
BAMY6639_19805	COG3334	PFAM MgtE intracellular
BAMY6639_19810	COG3144	bacterial-type flagellum assembly
BAMY6639_19815	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BAMY6639_19820	COG4786	Flagellar basal body rod
BAMY6639_19825	COG1582	Flagellar protein (FlbD)
BAMY6639_19830	COG1580	Controls the rotational direction of flagella during chemotaxis
BAMY6639_19835	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAMY6639_19840	COG1776	CheC inhibitor of MCP methylation
BAMY6639_19840	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BAMY6639_19845	COG2201	protein-glutamate methylesterase activity
BAMY6639_19850	COG3190	flagellar
BAMY6639_19855	COG1338	Plays a role in the flagellum-specific transport system
BAMY6639_19860	COG1987	bacterial-type flagellum assembly
BAMY6639_19865	COG1684	flagellar biosynthetic protein fliR
BAMY6639_19870	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BAMY6639_19875	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BAMY6639_19880	COG1419	protein localization to endoplasmic reticulum
BAMY6639_19885	COG0455	bacterial-type flagellum organization
BAMY6639_19890	COG2201	protein-glutamate methylesterase activity
BAMY6639_19895	COG0643	Histidine kinase
BAMY6639_19895	COG2198	Histidine kinase
BAMY6639_19900	COG0835	chemotaxis
BAMY6639_19905	COG1776	CheC inhibitor of MCP methylation
BAMY6639_19915	COG1191	sigma factor activity
BAMY6639_19945	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BAMY6639_19950	COG4589	Belongs to the CDS family
BAMY6639_19960	COG0750	zinc metalloprotease
BAMY6639_19970	COG2176	DNA-directed DNA polymerase activity
BAMY6639_19980	COG0195	Participates in both transcription termination and antitermination
BAMY6639_19985	COG2740	Nucleic-acid-binding protein implicated in transcription termination
BAMY6639_19990	COG1358	cellular component organization or biogenesis
BAMY6639_20000	COG1550	Protein conserved in bacteria
BAMY6639_20015	COG0196	riboflavin kinase activity
BAMY6639_20030	COG0726	polysaccharide deacetylase
BAMY6639_20035	COG0612	Peptidase, M16
BAMY6639_20040	COG1873	PFAM PRC-barrel domain
BAMY6639_20045	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BAMY6639_20050	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BAMY6639_20055	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BAMY6639_20060	COG0527	aspartate kinase activity
BAMY6639_20070	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BAMY6639_20075	COG0740	serine-type endopeptidase activity
BAMY6639_20085	COG4980	gas vesicle protein
BAMY6639_20085	COG1674	ftsk spoiiie
BAMY6639_20090	COG2188	Transcriptional regulator
BAMY6639_20095	COG2814	Major facilitator Superfamily
BAMY6639_20100	COG1846	Transcriptional regulator
BAMY6639_20105	COG1033	growth of symbiont in host cell
BAMY6639_20105	COG2409	Drug exporters of the RND superfamily
BAMY6639_20110	COG0612	Peptidase, M16
BAMY6639_20115	COG0612	Peptidase, M16
BAMY6639_20120	COG0300	oxidoreductase activity
BAMY6639_20135	COG1426	Protein conserved in bacteria
BAMY6639_20140	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BAMY6639_20170	COG1692	metallophosphoesterase
BAMY6639_20175	COG2359	stage V sporulation protein S
BAMY6639_20200	COG4550	Control of competence regulator ComK, YlbF/YmcA
BAMY6639_20220	COG0582	viral genome integration into host DNA
BAMY6639_20240	COG2801	Transposase and inactivated derivatives
BAMY6639_20280	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMY6639_20285	COG3425	synthase
BAMY6639_20290	COG1024	Enoyl-CoA hydratase
BAMY6639_20295	COG1024	Enoyl-CoA hydratase
BAMY6639_20300	COG0318	PFAM AMP-dependent synthetase and ligase
BAMY6639_20300	COG3321	synthase
BAMY6639_20300	COG0300	oxidoreductase activity
BAMY6639_20300	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_20300	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_20305	COG0300	oxidoreductase activity
BAMY6639_20305	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMY6639_20305	COG4221	oxidoreductase activity
BAMY6639_20305	COG3321	synthase
BAMY6639_20310	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAMY6639_20310	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_20310	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_20310	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMY6639_20310	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_20310	COG3321	synthase
BAMY6639_20310	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_20310	COG3321	synthase
BAMY6639_20310	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BAMY6639_20310	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BAMY6639_20315	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BAMY6639_20315	COG1028	Short-chain dehydrogenase reductase Sdr
BAMY6639_20315	COG3321	synthase
BAMY6639_20315	COG4221	oxidoreductase activity