locus-tag	class	description
BACIT_0001	COG2188	Transcriptional regulator
BACIT_0002	COG1674	ftsk spoiiie
BACIT_0002	COG4980	gas vesicle protein
BACIT_0004	COG0740	serine-type endopeptidase activity
BACIT_0005	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BACIT_0007	COG0527	aspartate kinase activity
BACIT_0008	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BACIT_0009	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BACIT_0010	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BACIT_0011	COG1873	PFAM PRC-barrel domain
BACIT_0012	COG0612	Peptidase, M16
BACIT_0013	COG0726	polysaccharide deacetylase
BACIT_0015	COG0196	riboflavin kinase activity
BACIT_0018	COG1550	Protein conserved in bacteria
BACIT_0020	COG1358	cellular component organization or biogenesis
BACIT_0021	COG2740	Nucleic-acid-binding protein implicated in transcription termination
BACIT_0022	COG0195	Participates in both transcription termination and antitermination
BACIT_0027	COG0750	zinc metalloprotease
BACIT_0030	COG4589	Belongs to the CDS family
BACIT_0031	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BACIT_0038	COG1191	sigma factor activity
BACIT_0040	COG1776	CheC inhibitor of MCP methylation
BACIT_0041	COG0835	chemotaxis
BACIT_0042	COG2198	Histidine kinase
BACIT_0042	COG0643	Histidine kinase
BACIT_0043	COG2201	protein-glutamate methylesterase activity
BACIT_0044	COG0455	bacterial-type flagellum organization
BACIT_0045	COG1419	protein localization to endoplasmic reticulum
BACIT_0046	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BACIT_0047	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BACIT_0048	COG1684	flagellar biosynthetic protein fliR
BACIT_0049	COG1987	bacterial-type flagellum assembly
BACIT_0050	COG1338	Plays a role in the flagellum-specific transport system
BACIT_0051	COG3190	flagellar
BACIT_0052	COG2201	protein-glutamate methylesterase activity
BACIT_0053	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BACIT_0053	COG1776	CheC inhibitor of MCP methylation
BACIT_0054	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BACIT_0055	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BACIT_0056	COG1580	Controls the rotational direction of flagella during chemotaxis
BACIT_0057	COG1582	Flagellar protein (FlbD)
BACIT_0058	COG4786	Flagellar basal body rod
BACIT_0059	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BACIT_0060	COG3144	bacterial-type flagellum assembly
BACIT_0061	COG3334	PFAM MgtE intracellular
BACIT_0062	COG2882	bacterial-type flagellum organization
BACIT_0063	COG1157	protein secretion by the type III secretion system
BACIT_0064	COG1317	bacterial-type flagellum organization
BACIT_0065	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BACIT_0066	COG1766	The M ring may be actively involved in energy transduction
BACIT_0067	COG1677	Flagellar hook-basal body complex protein FliE
BACIT_0068	COG1558	bacterial-type flagellum-dependent cell motility
BACIT_0069	COG1815	bacterial-type flagellum-dependent cell motility
BACIT_0073	COG4974	Belongs to the 'phage' integrase family
BACIT_0075	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BACIT_0076	COG0758	DNA mediated transformation
BACIT_0077	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BACIT_0079	COG2257	FlhB HrpN YscU SpaS Family
BACIT_0082	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BACIT_0087	COG1837	Belongs to the UPF0109 family
BACIT_0089	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BACIT_0092	COG0552	protein localization to endoplasmic reticulum
BACIT_0096	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BACIT_0097	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_0098	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BACIT_0101	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BACIT_0102	COG1760	l-serine dehydratase
BACIT_0103	COG1760	l-serine dehydratase
BACIT_0104	COG1461	Dihydroxyacetone kinase
BACIT_0105	COG1302	Protein conserved in bacteria
BACIT_0108	COG1564	THIamine pyrophosphokinase
BACIT_0109	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BACIT_0111	COG0515	serine threonine protein kinase
BACIT_0111	COG2815	serine threonine protein kinase
BACIT_0112	COG0631	protein serine/threonine phosphatase activity
BACIT_0114	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BACIT_0114	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BACIT_0116	COG0242	peptide deformylase activity
BACIT_0117	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BACIT_0118	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BACIT_0120	COG0194	GDP metabolic process
BACIT_0121	COG2052	Domain of unknown function (DUF370)
BACIT_0122	COG1561	YicC-like family, N-terminal region
BACIT_0123	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BACIT_0126	COG1648	precorrin-2 dehydrogenase activity
BACIT_0127	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
BACIT_0128	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BACIT_0131	COG0306	phosphate transporter
BACIT_0134	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BACIT_0135	COG0284	orotidine-5'-phosphate decarboxylase activity
BACIT_0138	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BACIT_0139	COG0505	Belongs to the CarA family
BACIT_0140	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BACIT_0142	COG2233	PERMEase
BACIT_0144	COG0564	pseudouridine synthase activity
BACIT_0146	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BACIT_0147	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BACIT_0148	COG3599	regulation of cell shape
BACIT_0149	COG2302	S4 RNA-binding domain
BACIT_0150	COG0762	integral membrane protein
BACIT_0152	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BACIT_0154	COG1873	PFAM PRC-barrel domain
BACIT_0155	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BACIT_0157	COG1119	ATPase activity
BACIT_0158	COG1191	sigma factor activity
BACIT_0159	COG1191	sigma factor activity
BACIT_0165	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BACIT_0166	COG0849	cell division
BACIT_0167	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BACIT_0170	COG0772	Belongs to the SEDS family
BACIT_0174	COG0768	penicillin binding
BACIT_0176	COG4839	cell division protein FtsL
BACIT_0180	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BACIT_0183	COG1399	metal-binding, possibly nucleic acid-binding protein
BACIT_0186	COG3480	Lon protease (S16) C-terminal proteolytic domain
BACIT_0187	COG1752	Esterase of the alpha-beta hydrolase superfamily
BACIT_0188	COG3314	Sporulation integral membrane protein YlbJ
BACIT_0190	COG0742	ribosomal rna small subunit methyltransferase
BACIT_0192	COG3679	Belongs to the UPF0342 family
BACIT_0195	COG2340	Cysteine-rich secretory protein family
BACIT_0196	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
BACIT_0198	COG3336	cytochrome c oxidase
BACIT_0199	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BACIT_0200	COG1845	cytochrome c oxidase, subunit III
BACIT_0201	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BACIT_0202	COG2010	Cytochrome c
BACIT_0202	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BACIT_0206	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BACIT_0207	COG0772	Belongs to the SEDS family
BACIT_0209	COG2066	Belongs to the glutaminase family
BACIT_0210	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BACIT_0211	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BACIT_0213	COG4896	Protein conserved in bacteria
BACIT_0219	COG1595	DNA-templated transcription, initiation
BACIT_0223	COG3227	Zinc metalloprotease (Elastase)
BACIT_0225	COG0483	inositol monophosphate 1-phosphatase activity
BACIT_0230	COG1982	Orn Lys Arg decarboxylase major
BACIT_0234	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BACIT_0235	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BACIT_0236	COG0508	dehydrogenase complex catalyzes the overall conversion of
BACIT_0237	COG0022	dehydrogenase e1 component
BACIT_0238	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BACIT_0239	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BACIT_0240	COG4221	oxidoreductase activity
BACIT_0240	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_0240	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_0240	COG3321	synthase
BACIT_0242	COG4221	oxidoreductase activity
BACIT_0242	COG3321	synthase
BACIT_0242	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_0242	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_0243	COG4221	oxidoreductase activity
BACIT_0243	COG3321	synthase
BACIT_0243	COG0300	oxidoreductase activity
BACIT_0243	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BACIT_0244	COG0300	oxidoreductase activity
BACIT_0244	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BACIT_0244	COG4221	oxidoreductase activity
BACIT_0244	COG3321	synthase
BACIT_0245	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BACIT_0245	COG3321	synthase
BACIT_0245	COG4221	oxidoreductase activity
BACIT_0245	COG0300	oxidoreductase activity
BACIT_0246	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_0246	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_0246	COG3321	synthase
BACIT_0246	COG4221	oxidoreductase activity
BACIT_0247	COG0300	oxidoreductase activity
BACIT_0247	COG4221	oxidoreductase activity
BACIT_0247	COG3321	synthase
BACIT_0247	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BACIT_0248	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_0248	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_0248	COG3321	synthase
BACIT_0248	COG4221	oxidoreductase activity
BACIT_0251	COG0497	DNA recombination
BACIT_0253	COG0242	peptide deformylase activity
BACIT_0254	COG0561	phosphatase activity
BACIT_0256	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BACIT_0259	COG0569	domain protein
BACIT_0260	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
BACIT_0260	COG2105	PFAM AIG2 family protein
BACIT_0261	COG3852	Histidine kinase
BACIT_0262	COG2002	toxin-antitoxin pair type II binding
BACIT_0264	COG1077	Cell shape determining protein MreB Mrl
BACIT_0265	COG1077	Cell shape determining protein MreB Mrl
BACIT_0267	COG2309	aminopeptidase activity
BACIT_0268	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BACIT_0269	COG0488	(ABC) transporter
BACIT_0271	COG0681	Belongs to the peptidase S26 family
BACIT_0272	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BACIT_0272	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BACIT_0272	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BACIT_0273	COG1105	Belongs to the carbohydrate kinase PfkB family
BACIT_0274	COG1349	DNA-binding transcription factor activity
BACIT_0275	COG0577	efflux transmembrane transporter activity
BACIT_0276	COG1136	(ABC) transporter
BACIT_0277	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BACIT_0281	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BACIT_0282	COG0314	molybdopterin synthase activity
BACIT_0283	COG1763	Mo-molybdopterin cofactor biosynthetic process
BACIT_0286	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BACIT_0291	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BACIT_0292	COG0668	transmembrane transport
BACIT_0296	COG0716	FMN binding
BACIT_0298	COG0716	FMN binding
BACIT_0299	COG0583	DNA-binding transcription factor activity
BACIT_0300	COG0517	IMP dehydrogenase activity
BACIT_0302	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
BACIT_0303	COG4703	Protein of unknown function (DUF1797)
BACIT_0305	COG2200	EAL domain
BACIT_0307	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_0308	COG1408	metallophosphoesterase
BACIT_0309	COG1376	ErfK ybiS ycfS ynhG family protein
BACIT_0310	COG2814	Major facilitator Superfamily
BACIT_0312	COG0784	Response regulator, receiver
BACIT_0312	COG0835	chemotaxis
BACIT_0314	COG0436	Aminotransferase
BACIT_0315	COG4191	Histidine kinase
BACIT_0316	COG0768	penicillin binding
BACIT_0317	COG2340	Cysteine-rich secretory protein family
BACIT_0318	COG2084	Dehydrogenase
BACIT_0321	COG1533	DNA photolyase activity
BACIT_0323	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BACIT_0324	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BACIT_0325	COG1263	PTS System
BACIT_0325	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BACIT_0325	COG2190	(PTS) system
BACIT_0326	COG3711	transcriptional antiterminator
BACIT_0327	COG1609	Transcriptional regulator
BACIT_0329	COG0006	proline dipeptidase activity
BACIT_0330	COG2217	Heavy metal translocating P-type atpase
BACIT_0331	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BACIT_0332	COG2244	polysaccharide biosynthetic process
BACIT_0333	COG2244	polysaccharide biosynthetic process
BACIT_0334	COG3773	Cell wall hydrolase
BACIT_0336	COG4873	Protein conserved in bacteria
BACIT_0340	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_0341	COG1733	regulation of RNA biosynthetic process
BACIT_0344	COG0602	queuosine metabolic process
BACIT_0345	COG0720	synthase
BACIT_0349	COG3949	Membrane
BACIT_0351	COG0542	response to heat
BACIT_0352	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BACIT_0353	COG1360	Flagellar Motor Protein
BACIT_0354	COG1846	Transcriptional regulator
BACIT_0355	COG1846	Transcriptional regulator
BACIT_0357	COG3852	Histidine kinase
BACIT_0364	COG0436	Aminotransferase
BACIT_0365	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BACIT_0369	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BACIT_0370	COG5002	protein histidine kinase activity
BACIT_0371	COG3594	Acyltransferase
BACIT_0373	COG2323	membrane
BACIT_0374	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BACIT_0380	COG1191	sigma factor activity
BACIT_0381	COG1191	sigma factor activity
BACIT_0382	COG0861	Integral membrane protein TerC family
BACIT_0383	COG0586	Pfam SNARE associated Golgi protein
BACIT_0386	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
BACIT_0387	COG3285	dna ligase
BACIT_0387	COG1793	dna ligase
BACIT_0388	COG0726	polysaccharide deacetylase
BACIT_0389	COG1846	Transcriptional regulator
BACIT_0392	COG0789	Transcriptional regulator
BACIT_0393	COG2239	Acts as a magnesium transporter
BACIT_0395	COG3858	chitin binding
BACIT_0395	COG1388	LysM domain
BACIT_0398	COG4721	ABC-type cobalt transport system, permease component
BACIT_0399	COG1122	ATPase activity
BACIT_0400	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BACIT_0401	COG1366	Belongs to the anti-sigma-factor antagonist family
BACIT_0403	COG1404	Belongs to the peptidase S8 family
BACIT_0405	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BACIT_0406	COG2814	Major facilitator Superfamily
BACIT_0408	COG0463	Glycosyl transferase, family 2
BACIT_0408	COG0457	Tetratricopeptide repeat
BACIT_0412	COG1764	response to oxidative stress
BACIT_0413	COG1846	Transcriptional regulator
BACIT_0414	COG1764	response to oxidative stress
BACIT_0416	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BACIT_0418	COG0788	formyltetrahydrofolate deformylase activity
BACIT_0419	COG2076	Multidrug Resistance protein
BACIT_0420	COG2076	Multidrug Resistance protein
BACIT_0422	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BACIT_0423	COG1607	acyl-coa hydrolase
BACIT_0424	COG1834	amidinotransferase
BACIT_0425	COG2706	6-phosphogluconolactonase activity
BACIT_0426	COG4608	Belongs to the ABC transporter superfamily
BACIT_0427	COG0791	NLP P60 protein
BACIT_0428	COG4948	Mandelate Racemase Muconate Lactonizing
BACIT_0429	COG1619	proteins homologs of microcin C7 resistance protein MccF
BACIT_0430	COG4166	transmembrane transport
BACIT_0431	COG0444	Belongs to the ABC transporter superfamily
BACIT_0432	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BACIT_0433	COG0601	transmembrane transport
BACIT_0434	COG2362	D-Aminopeptidase
BACIT_0436	COG0477	Major facilitator Superfamily
BACIT_0437	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BACIT_0439	COG0463	Glycosyl transferase, family 2
BACIT_0440	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BACIT_0441	COG0346	lactoylglutathione lyase activity
BACIT_0443	COG0531	amino acid
BACIT_0445	COG1392	Phosphate transport regulator
BACIT_0446	COG0306	phosphate transporter
BACIT_0451	COG5632	N-Acetylmuramoyl-L-alanine amidase
BACIT_0451	COG3409	Peptidoglycan-binding domain 1 protein
BACIT_0458	COG3728	DNA packaging
BACIT_0458	COG5484	DNA packaging
BACIT_0465	COG1484	DNA-dependent DNA replication
BACIT_0466	COG1522	sequence-specific DNA binding
BACIT_0467	COG1522	sequence-specific DNA binding
BACIT_0469	COG1396	sequence-specific DNA binding
BACIT_0471	COG2856	Zn peptidase
BACIT_0472	COG4195	phage-related replication protein
BACIT_0474	COG5632	N-Acetylmuramoyl-L-alanine amidase
BACIT_0474	COG3409	Peptidoglycan-binding domain 1 protein
BACIT_0474	COG1388	LysM domain
BACIT_0476	COG0457	Tetratricopeptide repeat
BACIT_0477	COG2318	DinB family
BACIT_0478	COG0730	response to heat
BACIT_0479	COG2721	sulfolactate sulfo-lyase activity
BACIT_0480	COG0246	Mannitol dehydrogenase
BACIT_0481	COG1609	Transcriptional regulator
BACIT_0482	COG2211	Major facilitator Superfamily
BACIT_0485	COG1252	NADH dehydrogenase
BACIT_0488	COG4297	protein containing double-stranded beta helix domain
BACIT_0489	COG0697	spore germination
BACIT_0490	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BACIT_0491	COG0390	transport system, permease component
BACIT_0492	COG1587	Uroporphyrinogen-III synthase
BACIT_0494	COG1819	glycosyl
BACIT_0495	COG2124	cytochrome p450
BACIT_0496	COG2427	Protein of unknown function (DUF1641)
BACIT_0497	COG3383	formate dehydrogenase (NAD+) activity
BACIT_0499	COG2205	protein histidine kinase activity
BACIT_0501	COG1285	pathogenesis
BACIT_0507	COG1447	Phosphotransferase system cellobiose-specific component IIA
BACIT_0510	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BACIT_0511	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BACIT_0512	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
BACIT_0514	COG1846	Transcriptional regulator
BACIT_0515	COG0477	Major facilitator Superfamily
BACIT_0516	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BACIT_0517	COG2367	Beta-lactamase
BACIT_0532	COG5444	nuclease activity
BACIT_0533	COG5444	nuclease activity
BACIT_0535	COG0626	cystathionine gamma-synthase activity
BACIT_0536	COG0626	cystathionine gamma-synthase activity
BACIT_0537	COG2382	esterase
BACIT_0539	COG2153	protein acetylation
BACIT_0546	COG0210	DNA helicase
BACIT_0558	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BACIT_0560	COG0351	phosphomethylpyrimidine kinase
BACIT_0561	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BACIT_0563	COG2104	thiamine diphosphate biosynthetic process
BACIT_0564	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BACIT_0565	COG0352	thiamine-phosphate diphosphorylase activity
BACIT_0566	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BACIT_0567	COG0569	domain protein
BACIT_0567	COG0475	glutathione-regulated potassium exporter activity
BACIT_0569	COG0564	pseudouridine synthase activity
BACIT_0570	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BACIT_0571	COG2357	RelA SpoT domain protein
BACIT_0573	COG4116	CYTH
BACIT_0574	COG0741	lytic transglycosylase activity
BACIT_0575	COG2346	COG2346, Truncated hemoglobins
BACIT_0578	COG1164	Oligoendopeptidase f
BACIT_0579	COG4469	Competence protein
BACIT_0580	COG4862	establishment of competence for transformation
BACIT_0581	COG0861	Integral membrane protein TerC family
BACIT_0582	COG1393	Belongs to the ArsC family
BACIT_0583	COG0456	acetyltransferase
BACIT_0585	COG4608	Belongs to the ABC transporter superfamily
BACIT_0586	COG0444	Belongs to the ABC transporter superfamily
BACIT_0587	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BACIT_0588	COG0601	transmembrane transport
BACIT_0589	COG4166	transmembrane transport
BACIT_0591	COG0180	Tryptophanyl-tRNA synthetase
BACIT_0593	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BACIT_0594	COG0601	transmembrane transport
BACIT_0596	COG4608	Belongs to the ABC transporter superfamily
BACIT_0597	COG0444	Belongs to the ABC transporter superfamily
BACIT_0598	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BACIT_0599	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BACIT_0602	COG1744	ABC transporter substrate-binding protein PnrA-like
BACIT_0604	COG2267	carboxylic ester hydrolase activity
BACIT_0608	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BACIT_0609	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BACIT_0610	COG0505	Belongs to the CarA family
BACIT_0611	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BACIT_0615	COG2271	Major facilitator Superfamily
BACIT_0616	COG0277	FAD linked oxidase domain protein
BACIT_0619	COG2151	metal-sulfur cluster biosynthetic enzyme
BACIT_0620	COG1073	alpha beta
BACIT_0621	COG0561	phosphatase activity
BACIT_0625	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BACIT_0626	COG1307	EDD domain protein, DegV family
BACIT_0628	COG2124	cytochrome p450
BACIT_0629	COG0840	transmembrane signaling receptor activity
BACIT_0631	COG2996	Protein conserved in bacteria
BACIT_0634	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BACIT_0634	COG0646	methionine synthase
BACIT_0635	COG2153	protein acetylation
BACIT_0636	COG1357	PFAM Pentapeptide repeats (8 copies)
BACIT_0637	COG2318	DinB family
BACIT_0638	COG1917	Cupin 2, conserved barrel domain protein
BACIT_0638	COG2207	Transcriptional regulator
BACIT_0639	COG0534	Mate efflux family protein
BACIT_0640	COG1562	ergosterol biosynthetic process
BACIT_0641	COG0367	asparagine synthase
BACIT_0644	COG0179	Fumarylacetoacetate (FAA) hydrolase
BACIT_0652	COG1403	HNH endonuclease
BACIT_0653	COG0419	ATPase involved in DNA repair
BACIT_0654	COG0420	3'-5' exonuclease activity
BACIT_0658	COG2323	membrane
BACIT_0659	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
BACIT_0661	COG2814	Major facilitator Superfamily
BACIT_0662	COG3180	Ammonia monooxygenase
BACIT_0663	COG1846	Transcriptional regulator
BACIT_0664	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BACIT_0665	COG0681	Belongs to the peptidase S26 family
BACIT_0666	COG0398	Pfam SNARE associated Golgi protein
BACIT_0669	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BACIT_0673	COG5646	InterPro IPR014922
BACIT_0675	COG4903	ComK protein
BACIT_0677	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_0680	COG0840	transmembrane signaling receptor activity
BACIT_0681	COG1268	BioY protein
BACIT_0682	COG0318	PFAM AMP-dependent synthetase and ligase
BACIT_0683	COG0183	Belongs to the thiolase family
BACIT_0684	COG0406	alpha-ribazole phosphatase activity
BACIT_0685	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BACIT_0687	COG1404	Belongs to the peptidase S8 family
BACIT_0688	COG0501	Belongs to the peptidase M48B family
BACIT_0690	COG0318	PFAM AMP-dependent synthetase and ligase
BACIT_0691	COG0702	epimerase
BACIT_0692	COG0095	Lipoate-protein ligase
BACIT_0693	COG1234	tRNA 3'-trailer cleavage
BACIT_0695	COG1301	dicarboxylic acid transport
BACIT_0696	COG1363	Peptidase, m42
BACIT_0698	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BACIT_0699	COG1511	domain protein
BACIT_0700	COG1309	transcriptional regulator
BACIT_0704	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BACIT_0705	COG2329	Antibiotic biosynthesis monooxygenase
BACIT_0706	COG3069	C4-dicarboxylate transmembrane transporter activity
BACIT_0707	COG1473	amidohydrolase
BACIT_0709	COG4473	ABC transporter
BACIT_0710	COG1131	(ABC) transporter
BACIT_0711	COG0537	adenosine 5'-monophosphoramidase activity
BACIT_0712	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BACIT_0715	COG4980	gas vesicle protein
BACIT_0723	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BACIT_0726	COG4717	serine-type aminopeptidase activity
BACIT_0727	COG0420	3'-5' exonuclease activity
BACIT_0728	COG1668	transmembrane transport
BACIT_0729	COG4152	abc transporter atp-binding protein
BACIT_0730	COG4152	abc transporter atp-binding protein
BACIT_0732	COG1024	Enoyl-CoA hydratase
BACIT_0735	COG0490	domain, Protein
BACIT_0738	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BACIT_0739	COG0561	phosphatase activity
BACIT_0740	COG4335	DNA alkylation repair
BACIT_0744	COG0189	ligase activity
BACIT_0745	COG0189	ligase activity
BACIT_0749	COG0702	epimerase
BACIT_0750	COG1132	(ABC) transporter
BACIT_0752	COG0589	response to stress
BACIT_0754	COG3226	Transcriptional regulator
BACIT_0755	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BACIT_0756	COG0726	polysaccharide deacetylase
BACIT_0757	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BACIT_0758	COG0668	transmembrane transport
BACIT_0761	COG0584	glycerophosphoryl diester phosphodiesterase
BACIT_0762	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BACIT_0763	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BACIT_0764	COG1253	flavin adenine dinucleotide binding
BACIT_0766	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BACIT_0767	COG0436	Aminotransferase
BACIT_0768	COG0789	Transcriptional regulator
BACIT_0769	COG1253	flavin adenine dinucleotide binding
BACIT_0770	COG0204	Acyl-transferase
BACIT_0772	COG1595	DNA-templated transcription, initiation
BACIT_0775	COG0733	neurotransmitter:sodium symporter activity
BACIT_0776	COG0531	amino acid
BACIT_0777	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_0778	COG0372	Belongs to the citrate synthase family
BACIT_0779	COG0583	DNA-binding transcription factor activity
BACIT_0780	COG1388	LysM domain
BACIT_0780	COG0791	NLP P60 protein
BACIT_0782	COG1785	Belongs to the alkaline phosphatase family
BACIT_0783	COG2719	SpoVR family
BACIT_0784	COG0668	transmembrane transport
BACIT_0785	COG1959	2 iron, 2 sulfur cluster binding
BACIT_0786	COG1388	LysM domain
BACIT_0786	COG0791	NLP P60 protein
BACIT_0789	COG0431	NADPH-dependent FMN reductase
BACIT_0790	COG2197	response regulator
BACIT_0791	COG4585	Histidine kinase
BACIT_0791	COG2203	Gaf domain
BACIT_0792	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BACIT_0793	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BACIT_0795	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BACIT_0796	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
BACIT_0797	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BACIT_0798	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BACIT_0798	COG3153	acetyltransferase
BACIT_0799	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BACIT_0800	COG0517	IMP dehydrogenase activity
BACIT_0802	COG0564	pseudouridine synthase activity
BACIT_0803	COG3764	Sortase (surface protein transpeptidase)
BACIT_0811	COG1823	symporter activity
BACIT_0812	COG3706	GGDEF domain
BACIT_0813	COG1464	Belongs to the NlpA lipoprotein family
BACIT_0814	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BACIT_0815	COG1131	(ABC) transporter
BACIT_0816	COG1131	(ABC) transporter
BACIT_0817	COG1725	Transcriptional regulator
BACIT_0820	COG0655	NAD(P)H dehydrogenase (quinone) activity
BACIT_0821	COG2814	Major facilitator Superfamily
BACIT_0822	COG1566	PFAM secretion protein HlyD family protein
BACIT_0823	COG1846	Transcriptional regulator
BACIT_0827	COG2766	serine protein kinase
BACIT_0829	COG1664	Polymer-forming cytoskeletal
BACIT_0830	COG1664	Polymer-forming cytoskeletal
BACIT_0831	COG0789	Transcriptional regulator
BACIT_0832	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BACIT_0834	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BACIT_0835	COG3382	B3 4 domain protein
BACIT_0836	COG1476	TRANSCRIPTIONal
BACIT_0841	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BACIT_0842	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BACIT_0843	COG1116	anion transmembrane transporter activity
BACIT_0846	COG0753	catalase activity
BACIT_0849	COG0277	FAD linked oxidase domain protein
BACIT_0852	COG3340	Belongs to the peptidase S51 family
BACIT_0853	COG1757	Na H antiporter
BACIT_0856	COG0735	belongs to the Fur family
BACIT_0857	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BACIT_0859	COG4129	membrane
BACIT_0860	COG1132	(ABC) transporter
BACIT_0865	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_0867	COG1194	a g-specific adenine glycosylase
BACIT_0868	COG1988	membrane-bound metal-dependent
BACIT_0869	COG4485	Bacterial membrane protein, YfhO
BACIT_0870	COG0463	Glycosyl transferase, family 2
BACIT_0872	COG0596	Alpha beta hydrolase
BACIT_0873	COG5658	integral membrane protein
BACIT_0874	COG3103	Sh3 type 3 domain protein
BACIT_0877	COG3591	Belongs to the peptidase S1B family
BACIT_0879	COG2814	Major facilitator Superfamily
BACIT_0883	COG1090	epimerase
BACIT_0886	COG0778	Nitroreductase
BACIT_0887	COG0384	phenazine biosynthesis protein PhzF
BACIT_0888	COG0392	lysyltransferase activity
BACIT_0888	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BACIT_0889	COG1846	Transcriptional regulator
BACIT_0890	COG2814	Major facilitator Superfamily
BACIT_0891	COG2318	DinB family
BACIT_0892	COG2732	(Barnase) inhibitor
BACIT_0895	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
BACIT_0896	COG2249	NAD(P)H dehydrogenase (quinone) activity
BACIT_0898	COG1695	Transcriptional regulator
BACIT_0901	COG2514	catechol 2,3-dioxygenase activity
BACIT_0902	COG2259	Doxx family
BACIT_0903	COG1132	(ABC) transporter
BACIT_0904	COG1132	(ABC) transporter
BACIT_0905	COG5434	Belongs to the glycosyl hydrolase 28 family
BACIT_0907	COG1263	PTS System
BACIT_0907	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BACIT_0908	COG1737	Transcriptional regulator
BACIT_0909	COG1486	melibiose metabolic process
BACIT_0911	COG3284	Transcriptional regulator
BACIT_0912	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BACIT_0913	COG0508	dehydrogenase complex catalyzes the overall conversion of
BACIT_0914	COG0022	dehydrogenase e1 component
BACIT_0915	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BACIT_0916	COG4637	Psort location Cytoplasmic, score
BACIT_0917	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BACIT_0919	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BACIT_0920	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BACIT_0921	COG0598	Magnesium transport protein CorA
BACIT_0923	COG2084	Dehydrogenase
BACIT_0924	COG0726	polysaccharide deacetylase
BACIT_0926	COG0535	radical SAM domain protein
BACIT_0927	COG0668	transmembrane transport
BACIT_0931	COG0387	Pfam Sodium calcium exchanger
BACIT_0932	COG0477	Major facilitator Superfamily
BACIT_0934	COG1295	ribonuclease BN
BACIT_0935	COG4980	gas vesicle protein
BACIT_0936	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BACIT_0938	COG2814	Major facilitator Superfamily
BACIT_0940	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BACIT_0942	COG1609	Transcriptional regulator
BACIT_0943	COG0693	protein deglycase activity
BACIT_0944	COG0737	Belongs to the 5'-nucleotidase family
BACIT_0947	COG0778	Nitroreductase
BACIT_0948	COG2188	Transcriptional regulator
BACIT_0949	COG0366	Alpha amylase catalytic
BACIT_0950	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BACIT_0950	COG1263	PTS System
BACIT_0953	COG0071	Belongs to the small heat shock protein (HSP20) family
BACIT_0955	COG1368	sulfuric ester hydrolase activity
BACIT_0956	COG1368	sulfuric ester hydrolase activity
BACIT_0958	COG1263	PTS System
BACIT_0958	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BACIT_0959	COG0024	Methionine aminopeptidase
BACIT_0963	COG2258	MOSC domain
BACIT_0965	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
BACIT_0966	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BACIT_0967	COG2851	Citrate transporter
BACIT_0968	COG3181	Tripartite tricarboxylate transporter family receptor
BACIT_0969	COG4565	transcriptional regulatory protein
BACIT_0970	COG3290	protein histidine kinase activity
BACIT_0977	COG0471	metal ion transport
BACIT_0982	COG2130	NADP-dependent
BACIT_0985	COG0513	Belongs to the DEAD box helicase family
BACIT_0986	COG0488	(ABC) transporter
BACIT_0987	COG2814	Major facilitator Superfamily
BACIT_0988	COG0789	Transcriptional regulator
BACIT_0989	COG0488	(ABC) transporter
BACIT_0990	COG0463	Glycosyl transferase, family 2
BACIT_0990	COG0457	Tetratricopeptide repeat
BACIT_0991	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_0992	COG0840	transmembrane signaling receptor activity
BACIT_0993	COG1012	belongs to the aldehyde dehydrogenase family
BACIT_0994	COG0531	amino acid
BACIT_0995	COG2223	nitrite transmembrane transporter activity
BACIT_0996	COG1442	glycosyl transferase family 8
BACIT_0997	COG1216	Glycosyl transferase, family 2
BACIT_0998	COG1442	glycosyl transferase family 8
BACIT_0999	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BACIT_1000	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BACIT_1001	COG1368	sulfuric ester hydrolase activity
BACIT_1003	COG4106	trans-aconitate 2-methyltransferase activity
BACIT_1012	COG1131	(ABC) transporter
BACIT_1015	COG2124	cytochrome p450
BACIT_1015	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BACIT_1017	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BACIT_1020	COG0670	Belongs to the BI1 family
BACIT_1021	COG0196	riboflavin kinase activity
BACIT_1022	COG5583	Uncharacterized small protein (DUF2292)
BACIT_1024	COG1366	Belongs to the anti-sigma-factor antagonist family
BACIT_1025	COG0346	lactoylglutathione lyase activity
BACIT_1026	COG2329	Antibiotic biosynthesis monooxygenase
BACIT_1027	COG2323	membrane
BACIT_1029	COG0454	-acetyltransferase
BACIT_1030	COG3546	catalase activity
BACIT_1035	COG5444	nuclease activity
BACIT_1040	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
BACIT_1042	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
BACIT_1044	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BACIT_1045	COG1597	lipid kinase activity
BACIT_1048	COG1309	transcriptional regulator
BACIT_1052	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BACIT_1053	COG1285	pathogenesis
BACIT_1054	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BACIT_1055	COG4851	CamS sex pheromone cAM373 precursor
BACIT_1057	COG0210	DNA helicase
BACIT_1060	COG0069	glutamate synthase activity
BACIT_1061	COG4496	protein, YerC YecD
BACIT_1062	COG1470	cell adhesion involved in biofilm formation
BACIT_1063	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
BACIT_1065	COG0151	Belongs to the GarS family
BACIT_1066	COG0138	bifunctional purine biosynthesis protein purh
BACIT_1067	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BACIT_1069	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BACIT_1072	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BACIT_1073	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BACIT_1074	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BACIT_1075	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BACIT_1076	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BACIT_1080	COG3064	Membrane
BACIT_1081	COG2252	PERMEase
BACIT_1085	COG1305	Transglutaminase-like
BACIT_1086	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
BACIT_1087	COG0714	Associated with various cellular activities
BACIT_1088	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BACIT_1089	COG1113	amino acid transport
BACIT_1090	COG2132	Multicopper oxidase
BACIT_1093	COG0823	Involved in the tonB-independent uptake of proteins
BACIT_1094	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BACIT_1095	COG1063	alcohol dehydrogenase
BACIT_1096	COG1595	DNA-templated transcription, initiation
BACIT_1099	COG2755	lipolytic protein G-D-S-L family
BACIT_1099	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BACIT_1100	COG4260	virion core protein, lumpy skin disease virus
BACIT_1101	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
BACIT_1102	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BACIT_1103	COG1842	Phage shock protein A
BACIT_1105	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BACIT_1106	COG2211	Major facilitator Superfamily
BACIT_1107	COG1063	alcohol dehydrogenase
BACIT_1108	COG0457	Tetratricopeptide repeat
BACIT_1113	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BACIT_1114	COG1266	CAAX protease self-immunity
BACIT_1116	COG0805	protein transport
BACIT_1117	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BACIT_1120	COG0488	(ABC) transporter
BACIT_1121	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BACIT_1122	COG0456	acetyltransferase
BACIT_1123	COG1214	PFAM Peptidase M22, glycoprotease
BACIT_1124	COG0802	atpase or kinase
BACIT_1125	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
BACIT_1126	COG2814	Major facilitator Superfamily
BACIT_1127	COG0604	alcohol dehydrogenase
BACIT_1128	COG3832	glyoxalase III activity
BACIT_1130	COG0531	amino acid
BACIT_1131	COG1309	transcriptional regulator
BACIT_1132	COG2076	Multidrug Resistance protein
BACIT_1133	COG2076	Multidrug Resistance protein
BACIT_1134	COG2807	transmembrane transport
BACIT_1135	COG2186	Transcriptional regulator
BACIT_1136	COG2188	Transcriptional regulator
BACIT_1137	COG2814	Major facilitator Superfamily
BACIT_1138	COG1388	LysM domain
BACIT_1141	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BACIT_1145	COG1819	glycosyl
BACIT_1146	COG1802	Transcriptional regulator
BACIT_1149	COG2226	methyltransferase
BACIT_1150	COG1051	belongs to the nudix hydrolase family
BACIT_1151	COG0697	spore germination
BACIT_1152	COG0789	Transcriptional regulator
BACIT_1152	COG4978	Transcriptional regulator
BACIT_1153	COG0456	acetyltransferase
BACIT_1154	COG0730	response to heat
BACIT_1156	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BACIT_1157	COG2814	Major facilitator Superfamily
BACIT_1159	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BACIT_1160	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BACIT_1162	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BACIT_1163	COG2409	Drug exporters of the RND superfamily
BACIT_1164	COG2197	response regulator
BACIT_1165	COG4585	Histidine kinase
BACIT_1168	COG5577	PFAM Coat F domain
BACIT_1169	COG1063	alcohol dehydrogenase
BACIT_1171	COG5577	PFAM Coat F domain
BACIT_1172	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BACIT_1173	COG0697	spore germination
BACIT_1174	COG1309	transcriptional regulator
BACIT_1184	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BACIT_1187	COG0789	Transcriptional regulator
BACIT_1188	COG1064	alcohol dehydrogenase
BACIT_1191	COG0351	phosphomethylpyrimidine kinase
BACIT_1198	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BACIT_1199	COG2318	DinB family
BACIT_1201	COG0662	Cupin 2, conserved barrel domain protein
BACIT_1207	COG0277	FAD linked oxidase domain protein
BACIT_1209	COG0662	Cupin 2, conserved barrel domain protein
BACIT_1211	COG3621	Patatin-like phospholipase
BACIT_1212	COG2271	Major facilitator Superfamily
BACIT_1213	COG1846	Transcriptional regulator
BACIT_1213	COG0456	acetyltransferase
BACIT_1217	COG1794	racemase activity, acting on amino acids and derivatives
BACIT_1218	COG0730	response to heat
BACIT_1219	COG0425	Belongs to the sulfur carrier protein TusA family
BACIT_1220	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BACIT_1220	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BACIT_1221	COG0425	Belongs to the sulfur carrier protein TusA family
BACIT_1221	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BACIT_1223	COG2210	Belongs to the sulfur carrier protein TusA family
BACIT_1224	COG1937	Protein conserved in bacteria
BACIT_1225	COG1329	Transcriptional regulator
BACIT_1227	COG3239	Fatty acid desaturase
BACIT_1228	COG0604	alcohol dehydrogenase
BACIT_1230	COG0300	oxidoreductase activity
BACIT_1231	COG1309	transcriptional regulator
BACIT_1233	COG2910	NAD(P)H-binding
BACIT_1234	COG1959	2 iron, 2 sulfur cluster binding
BACIT_1236	COG2030	dehydratase
BACIT_1237	COG1846	Transcriptional regulator
BACIT_1241	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BACIT_1243	COG2249	NAD(P)H dehydrogenase (quinone) activity
BACIT_1246	COG2183	response to ionizing radiation
BACIT_1247	COG2208	phosphoserine phosphatase activity
BACIT_1248	COG1191	sigma factor activity
BACIT_1250	COG1366	Belongs to the anti-sigma-factor antagonist family
BACIT_1251	COG2208	phosphoserine phosphatase activity
BACIT_1252	COG2172	sigma factor antagonist activity
BACIT_1253	COG1366	Belongs to the anti-sigma-factor antagonist family
BACIT_1254	COG1366	Belongs to the anti-sigma-factor antagonist family
BACIT_1255	COG2337	Toxic component of a toxin-antitoxin (TA) module
BACIT_1256	COG0864	Transcriptional regulator
BACIT_1257	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BACIT_1258	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BACIT_1260	COG0705	Rhomboid family
BACIT_1261	COG3428	Bacterial PH domain
BACIT_1262	COG3402	PFAM membrane-flanked domain
BACIT_1263	COG0513	Belongs to the DEAD box helicase family
BACIT_1265	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BACIT_1267	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BACIT_1272	COG1960	acyl-CoA dehydrogenase activity
BACIT_1274	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BACIT_1275	COG1131	(ABC) transporter
BACIT_1276	COG0628	permease
BACIT_1277	COG1301	dicarboxylic acid transport
BACIT_1278	COG4565	transcriptional regulatory protein
BACIT_1279	COG3290	protein histidine kinase activity
BACIT_1280	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BACIT_1281	COG3546	catalase activity
BACIT_1282	COG2329	Antibiotic biosynthesis monooxygenase
BACIT_1283	COG0662	Cupin 2, conserved barrel domain protein
BACIT_1284	COG3729	General stress protein
BACIT_1285	COG2217	Heavy metal translocating P-type atpase
BACIT_1286	COG2076	Multidrug Resistance protein
BACIT_1288	COG4876	unkown
BACIT_1291	COG1914	H( )-stimulated, divalent metal cation uptake system
BACIT_1297	COG0457	Tetratricopeptide repeat
BACIT_1301	COG0028	Belongs to the TPP enzyme family
BACIT_1302	COG0494	nUDIX hydrolase
BACIT_1303	COG0531	amino acid
BACIT_1305	COG1215	transferase activity, transferring glycosyl groups
BACIT_1306	COG5298	Protein conserved in bacteria
BACIT_1307	COG3706	GGDEF domain
BACIT_1308	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BACIT_1309	COG0551	DNA topoisomerase type I activity
BACIT_1309	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BACIT_1310	COG1522	sequence-specific DNA binding
BACIT_1311	COG2814	Major facilitator Superfamily
BACIT_1313	COG3871	stress protein (general stress protein 26)
BACIT_1314	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BACIT_1315	COG1917	Cupin 2, conserved barrel domain protein
BACIT_1316	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_1317	COG0318	PFAM AMP-dependent synthetase and ligase
BACIT_1320	COG4989	oxidoreductase activity
BACIT_1322	COG0768	penicillin binding
BACIT_1323	COG2329	Antibiotic biosynthesis monooxygenase
BACIT_1325	COG2755	lipolytic protein G-D-S-L family
BACIT_1326	COG1414	Transcriptional regulator
BACIT_1327	COG1984	allophanate hydrolase subunit 2
BACIT_1328	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BACIT_1330	COG1914	H( )-stimulated, divalent metal cation uptake system
BACIT_1332	COG0561	phosphatase activity
BACIT_1335	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BACIT_1337	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BACIT_1338	COG2213	PTS system mannitol-specific
BACIT_1340	COG1349	DNA-binding transcription factor activity
BACIT_1341	COG1276	copper resistance
BACIT_1341	COG2372	response to copper ion
BACIT_1342	COG4549	nuclear export factor GLE1
BACIT_1343	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_1344	COG4975	Glucose uptake
BACIT_1346	COG1012	belongs to the aldehyde dehydrogenase family
BACIT_1347	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BACIT_1348	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BACIT_1349	COG0640	Transcriptional regulator
BACIT_1350	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BACIT_1351	COG0778	Nitroreductase
BACIT_1352	COG1309	transcriptional regulator
BACIT_1353	COG2814	Major facilitator Superfamily
BACIT_1354	COG4607	ABC-type enterochelin transport system periplasmic component
BACIT_1355	COG4604	ABC transporter, ATP-binding protein
BACIT_1356	COG4605	iron ion homeostasis
BACIT_1357	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BACIT_1359	COG0527	aspartate kinase activity
BACIT_1362	COG0457	Tetratricopeptide repeat
BACIT_1364	COG5002	protein histidine kinase activity
BACIT_1364	COG3850	Histidine kinase
BACIT_1365	COG5002	protein histidine kinase activity
BACIT_1365	COG3850	Histidine kinase
BACIT_1366	COG0745	RESPONSE REGULATOR receiver
BACIT_1368	COG0577	efflux transmembrane transporter activity
BACIT_1369	COG1136	(ABC) transporter
BACIT_1370	COG2079	MmgE PrpD family protein
BACIT_1372	COG1126	abc transporter atp-binding protein
BACIT_1373	COG0765	amino acid transport
BACIT_1374	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BACIT_1375	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BACIT_1376	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BACIT_1379	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BACIT_1381	COG0697	spore germination
BACIT_1384	COG5434	Belongs to the glycosyl hydrolase 28 family
BACIT_1385	COG3104	oligopeptide transport
BACIT_1388	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BACIT_1389	COG0163	prenyltransferase activity
BACIT_1390	COG0583	DNA-binding transcription factor activity
BACIT_1391	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BACIT_1392	COG0765	amino acid transport
BACIT_1393	COG1126	abc transporter atp-binding protein
BACIT_1394	COG2364	Membrane
BACIT_1397	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BACIT_1398	COG0697	spore germination
BACIT_1402	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
BACIT_1403	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_1404	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_1405	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_1407	COG1733	regulation of RNA biosynthetic process
BACIT_1408	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
BACIT_1409	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BACIT_1410	COG3209	COG3209 Rhs family protein
BACIT_1412	COG2723	6-phospho-beta-galactosidase activity
BACIT_1414	COG1714	RDD family
BACIT_1415	COG1063	alcohol dehydrogenase
BACIT_1416	COG0523	cobalamin synthesis protein
BACIT_1417	COG2223	nitrite transmembrane transporter activity
BACIT_1418	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BACIT_1421	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BACIT_1422	COG2146	nitrite reductase [NAD(P)H] activity
BACIT_1423	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BACIT_1423	COG1587	Uroporphyrinogen-III synthase
BACIT_1425	COG2508	Transcriptional regulator
BACIT_1426	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BACIT_1427	COG1012	belongs to the aldehyde dehydrogenase family
BACIT_1428	COG0506	proline dehydrogenase activity
BACIT_1429	COG3541	Predicted nucleotidyltransferase
BACIT_1430	COG3458	cephalosporin-C deacetylase activity
BACIT_1431	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BACIT_1432	COG2271	Major facilitator Superfamily
BACIT_1433	COG1082	Xylose isomerase domain protein TIM barrel
BACIT_1434	COG1660	Displays ATPase and GTPase activities
BACIT_1437	COG3665	Urea carboxylase-associated protein
BACIT_1438	COG1113	amino acid transport
BACIT_1439	COG3403	YqcI/YcgG family
BACIT_1440	COG1280	lysine exporter protein (LysE YggA)
BACIT_1441	COG1846	Transcriptional regulator
BACIT_1442	COG2814	Major facilitator Superfamily
BACIT_1445	COG0366	Alpha amylase catalytic
BACIT_1447	COG1288	antiporter activity
BACIT_1448	COG1473	amidohydrolase
BACIT_1449	COG2113	Glycine betaine
BACIT_1450	COG4176	ABC-type proline glycine betaine transport system permease component
BACIT_1451	COG4175	Glycine betaine
BACIT_1451	COG0517	IMP dehydrogenase activity
BACIT_1452	COG0477	Major facilitator Superfamily
BACIT_1453	COG3853	Toxic anion resistance protein (TelA)
BACIT_1455	COG0861	Integral membrane protein TerC family
BACIT_1456	COG2310	stress, protein
BACIT_1457	COG2310	stress, protein
BACIT_1458	COG2310	stress, protein
BACIT_1459	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BACIT_1460	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BACIT_1461	COG1121	(ABC) transporter
BACIT_1462	COG0803	Belongs to the bacterial solute-binding protein 9 family
BACIT_1463	COG0366	Alpha amylase catalytic
BACIT_1464	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_1466	COG0457	Tetratricopeptide repeat
BACIT_1467	COG1876	peptidase activity
BACIT_1468	COG1595	DNA-templated transcription, initiation
BACIT_1469	COG1595	DNA-templated transcription, initiation
BACIT_1471	COG0667	Aldo Keto reductase
BACIT_1472	COG1405	negative regulation of cell septum assembly
BACIT_1472	COG3012	SEC-C Motif Domain Protein
BACIT_1473	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
BACIT_1474	COG0252	asparaginase activity
BACIT_1475	COG1309	transcriptional regulator
BACIT_1476	COG0477	Major facilitator Superfamily
BACIT_1477	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BACIT_1479	COG0805	protein transport
BACIT_1480	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BACIT_1481	COG3540	Alkaline phosphatase
BACIT_1483	COG3773	Cell wall hydrolase
BACIT_1486	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BACIT_1487	COG2259	Doxx family
BACIT_1488	COG0346	lactoylglutathione lyase activity
BACIT_1489	COG0778	Nitroreductase
BACIT_1490	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BACIT_1493	COG3173	Aminoglycoside phosphotransferase
BACIT_1494	COG0784	Response regulator, receiver
BACIT_1495	COG4191	Histidine kinase
BACIT_1496	COG2066	Belongs to the glutaminase family
BACIT_1497	COG1115	amino acid carrier protein
BACIT_1498	COG2040	homocysteine
BACIT_1500	COG0833	amino acid
BACIT_1501	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BACIT_1502	COG1301	dicarboxylic acid transport
BACIT_1505	COG0688	phosphatidylethanolamine metabolic process
BACIT_1506	COG0586	Pfam SNARE associated Golgi protein
BACIT_1507	COG1183	phosphatidylcholine synthase activity
BACIT_1511	COG0371	Dehydrogenase
BACIT_1515	COG3409	Peptidoglycan-binding domain 1 protein
BACIT_1517	COG2368	4-hydroxyphenylacetate
BACIT_1519	COG2271	Major facilitator Superfamily
BACIT_1520	COG0584	glycerophosphoryl diester phosphodiesterase
BACIT_1522	COG0531	amino acid
BACIT_1530	COG1131	(ABC) transporter
BACIT_1531	COG2197	response regulator
BACIT_1532	COG4585	Histidine kinase
BACIT_1533	COG1011	Hydrolase
BACIT_1534	COG1113	amino acid transport
BACIT_1535	COG1846	Transcriptional regulator
BACIT_1537	COG1380	Effector of murein hydrolase LrgA
BACIT_1538	COG1346	cytolysis
BACIT_1545	COG2205	protein histidine kinase activity
BACIT_1546	COG0745	RESPONSE REGULATOR receiver
BACIT_1554	COG4856	YbbR-like protein
BACIT_1555	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BACIT_1556	COG5662	AntiSigma factor
BACIT_1557	COG1595	DNA-templated transcription, initiation
BACIT_1558	COG1683	Conserved Protein
BACIT_1559	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BACIT_1561	COG1263	PTS System
BACIT_1561	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BACIT_1562	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BACIT_1563	COG1472	Belongs to the glycosyl hydrolase 3 family
BACIT_1564	COG3876	Protein conserved in bacteria
BACIT_1567	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BACIT_1568	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BACIT_1569	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BACIT_1570	COG2819	hydrolase of the alpha beta superfamily
BACIT_1571	COG0385	Bile acid
BACIT_1572	COG0659	secondary active sulfate transmembrane transporter activity
BACIT_1575	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BACIT_1576	COG0738	Major facilitator superfamily
BACIT_1577	COG0726	polysaccharide deacetylase
BACIT_1578	COG2194	sulfuric ester hydrolase activity
BACIT_1580	COG0489	protein tyrosine kinase activity
BACIT_1581	COG0860	N-Acetylmuramoyl-L-alanine amidase
BACIT_1583	COG2318	DinB family
BACIT_1584	COG2226	methyltransferase
BACIT_1585	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BACIT_1587	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BACIT_1588	COG1122	ATPase activity
BACIT_1589	COG1122	ATPase activity
BACIT_1592	COG0024	Methionine aminopeptidase
BACIT_1594	COG0201	protein transport
BACIT_1596	COG1841	ribosomal large subunit assembly
BACIT_1604	COG0255	Belongs to the universal ribosomal protein uL29 family
BACIT_1605	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BACIT_1607	COG0089	rRNA binding
BACIT_1611	COG0596	Alpha beta hydrolase
BACIT_1615	COG1358	cellular component organization or biogenesis
BACIT_1618	COG2813	Specifically methylates the guanine in position
BACIT_1619	COG2813	Specifically methylates the guanine in position
BACIT_1620	COG0222	ribosome binding
BACIT_1623	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BACIT_1624	COG0250	Participates in transcription elongation, termination and antitermination
BACIT_1625	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BACIT_1626	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BACIT_1627	COG1595	DNA-templated transcription, initiation
BACIT_1628	COG3688	RNA-binding protein containing a PIN domain
BACIT_1629	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BACIT_1630	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BACIT_1632	COG1045	serine acetyltransferase
BACIT_1638	COG4956	integral membrane protein (PIN domain superfamily)
BACIT_1639	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
BACIT_1640	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BACIT_1641	COG0542	response to heat
BACIT_1643	COG3880	PFAM UvrB UvrC protein
BACIT_1644	COG4463	regulation of RNA biosynthetic process
BACIT_1646	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BACIT_1647	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BACIT_1648	COG1396	sequence-specific DNA binding
BACIT_1649	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BACIT_1650	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BACIT_1651	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BACIT_1652	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BACIT_1653	COG0512	Glutamine amidotransferase of anthranilate synthase
BACIT_1654	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BACIT_1656	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BACIT_1657	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BACIT_1660	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BACIT_1662	COG0037	tRNA processing
BACIT_1663	COG0515	serine threonine protein kinase
BACIT_1664	COG2304	oxidoreductase activity
BACIT_1665	COG2208	phosphoserine phosphatase activity
BACIT_1667	COG1098	S1 RNA binding domain
BACIT_1668	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
BACIT_1671	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BACIT_1672	COG3956	TIGRFAM MazG family protein
BACIT_1673	COG2244	polysaccharide biosynthetic process
BACIT_1674	COG2002	toxin-antitoxin pair type II binding
BACIT_1675	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BACIT_1679	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BACIT_1682	COG0251	oxidation-reduction process
BACIT_1683	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BACIT_1686	COG4466	Protein conserved in bacteria
BACIT_1688	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BACIT_1689	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BACIT_1690	COG3584	3D domain protein
BACIT_1690	COG3583	domain protein
BACIT_1691	COG0084	hydrolase, TatD family'
BACIT_1692	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BACIT_1692	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BACIT_1693	COG2002	toxin-antitoxin pair type II binding
BACIT_1694	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BACIT_1696	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BACIT_1698	COG1774	PSP1 C-terminal conserved region
BACIT_1699	COG0470	DNA polymerase III
BACIT_1700	COG1728	Protein conserved in bacteria
BACIT_1701	COG3870	Protein conserved in bacteria
BACIT_1703	COG1982	Orn Lys Arg decarboxylase major
BACIT_1704	COG3853	Toxic anion resistance protein (TelA)
BACIT_1711	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BACIT_1712	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BACIT_1714	COG0590	tRNA wobble adenosine to inosine editing
BACIT_1715	COG1335	isochorismatase
BACIT_1716	COG1388	LysM domain
BACIT_1716	COG3858	chitin binding
BACIT_1717	COG1428	Deoxynucleoside kinase
BACIT_1718	COG1428	Deoxynucleoside kinase
BACIT_1720	COG1929	Belongs to the glycerate kinase type-1 family
BACIT_1724	COG1686	Belongs to the peptidase S11 family
BACIT_1725	COG0517	IMP dehydrogenase activity
BACIT_1725	COG0516	GMP reductase activity
BACIT_1727	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BACIT_1728	COG0187	DNA topoisomerase II activity
BACIT_1731	COG2501	S4 domain
BACIT_1732	COG0592	DNA-directed DNA polymerase activity
BACIT_1736	COG0706	membrane insertase activity
BACIT_1737	COG1847	R3H domain protein
BACIT_1742	COG1192	Involved in chromosome partitioning
BACIT_1743	COG1475	DNA binding
BACIT_1746	COG3949	Membrane
BACIT_1747	COG4481	Protein conserved in bacteria
BACIT_1748	COG0243	molybdopterin cofactor binding
BACIT_1749	COG0012	GTP binding
BACIT_1751	COG0629	single-stranded DNA binding
BACIT_1752	COG2169	Transcriptional regulator
BACIT_1753	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BACIT_1754	COG0708	Exodeoxyribonuclease III
BACIT_1755	COG1609	Transcriptional regulator
BACIT_1756	COG0346	lactoylglutathione lyase activity
BACIT_1757	COG0477	Major facilitator Superfamily
BACIT_1757	COG2814	Major facilitator Superfamily
BACIT_1758	COG1266	CAAX protease self-immunity
BACIT_1759	COG1331	Highly conserved protein containing a thioredoxin domain
BACIT_1760	COG0515	serine threonine protein kinase
BACIT_1760	COG2815	serine threonine protein kinase
BACIT_1768	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_1769	COG0583	DNA-binding transcription factor activity
BACIT_1771	COG2153	protein acetylation
BACIT_1772	COG1846	Transcriptional regulator
BACIT_1773	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BACIT_1774	COG1846	Transcriptional regulator
BACIT_1775	COG0778	Nitroreductase
BACIT_1777	COG0583	DNA-binding transcription factor activity
BACIT_1778	COG2814	Major facilitator Superfamily
BACIT_1780	COG0583	DNA-binding transcription factor activity
BACIT_1784	COG2318	DinB family
BACIT_1785	COG1802	Transcriptional regulator
BACIT_1788	COG1621	beta-fructofuranosidase activity
BACIT_1789	COG0697	spore germination
BACIT_1791	COG1733	regulation of RNA biosynthetic process
BACIT_1792	COG5577	PFAM Coat F domain
BACIT_1794	COG4241	membrane
BACIT_1795	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
BACIT_1799	COG0438	transferase activity, transferring glycosyl groups
BACIT_1800	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
BACIT_1803	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BACIT_1804	COG3093	addiction module antidote protein HigA
BACIT_1807	COG0305	Participates in initiation and elongation during chromosome replication
BACIT_1808	COG0346	lactoylglutathione lyase activity
BACIT_1811	COG0745	RESPONSE REGULATOR receiver
BACIT_1812	COG5002	protein histidine kinase activity
BACIT_1813	COG4863	YycH protein
BACIT_1814	COG4853	Protein conserved in bacteria
BACIT_1815	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BACIT_1816	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BACIT_1818	COG0745	RESPONSE REGULATOR receiver
BACIT_1819	COG5002	protein histidine kinase activity
BACIT_1819	COG3850	Histidine kinase
BACIT_1820	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BACIT_1823	COG0488	(ABC) transporter
BACIT_1824	COG3829	transcription factor binding
BACIT_1825	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BACIT_1826	COG0833	amino acid
BACIT_1827	COG0010	Belongs to the arginase family
BACIT_1828	COG0457	Tetratricopeptide repeat
BACIT_1830	COG0456	acetyltransferase
BACIT_1831	COG0667	Aldo Keto reductase
BACIT_1832	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
BACIT_1844	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
BACIT_1845	COG2068	MobA-Related Protein
BACIT_1848	COG2080	2 iron, 2 sulfur cluster binding
BACIT_1850	COG1113	amino acid transport
BACIT_1851	COG3177	Filamentation induced by cAMP protein fic
BACIT_1852	COG3634	alkyl hydroperoxide reductase activity
BACIT_1853	COG0450	alkyl hydroperoxide reductase
BACIT_1855	COG1714	RDD family
BACIT_1856	COG2814	Major facilitator Superfamily
BACIT_1857	COG0640	Transcriptional regulator
BACIT_1859	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BACIT_1860	COG1012	belongs to the aldehyde dehydrogenase family
BACIT_1861	COG1309	transcriptional regulator
BACIT_1863	COG3239	Fatty acid desaturase
BACIT_1864	COG4585	Histidine kinase
BACIT_1865	COG2197	response regulator
BACIT_1866	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_1869	COG2814	Major facilitator Superfamily
BACIT_1870	COG0667	Aldo Keto reductase
BACIT_1871	COG1349	DNA-binding transcription factor activity
BACIT_1878	COG2814	Major facilitator Superfamily
BACIT_1880	COG1082	Xylose isomerase domain protein TIM barrel
BACIT_1886	COG0745	RESPONSE REGULATOR receiver
BACIT_1887	COG2205	protein histidine kinase activity
BACIT_1888	COG0745	RESPONSE REGULATOR receiver
BACIT_1889	COG2205	protein histidine kinase activity
BACIT_1890	COG1136	(ABC) transporter
BACIT_1893	COG5294	Protein conserved in bacteria
BACIT_1894	COG2801	Transposase and inactivated derivatives
BACIT_1895	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BACIT_1902	COG0561	phosphatase activity
BACIT_1903	COG2390	Transcriptional regulator
BACIT_1905	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BACIT_1906	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BACIT_1907	COG0833	amino acid
BACIT_1908	COG0010	Belongs to the arginase family
BACIT_1913	COG3507	Belongs to the glycosyl hydrolase 43 family
BACIT_1914	COG0494	nUDIX hydrolase
BACIT_1916	COG1263	PTS System
BACIT_1916	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BACIT_1916	COG2190	(PTS) system
BACIT_1917	COG2723	6-phospho-beta-galactosidase activity
BACIT_1918	COG0589	response to stress
BACIT_1920	COG0697	spore germination
BACIT_1931	COG0513	Belongs to the DEAD box helicase family
BACIT_1932	COG2270	Major facilitator Superfamily
BACIT_1933	COG3711	transcriptional antiterminator
BACIT_1934	COG2273	Hydrolase Family 16
BACIT_1935	COG2851	Citrate transporter
BACIT_1936	COG0693	protein deglycase activity
BACIT_1936	COG0753	catalase activity
BACIT_1940	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BACIT_1943	COG0500	methyltransferase
BACIT_1944	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BACIT_1945	COG4894	glucomannan catabolic process
BACIT_1950	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BACIT_1953	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BACIT_1955	COG2508	Transcriptional regulator
BACIT_1956	COG3842	ATPase activity
BACIT_1957	COG0726	polysaccharide deacetylase
BACIT_1958	COG3493	citrate carrier protein
BACIT_1960	COG1271	oxidase subunit
BACIT_1961	COG1294	oxidase, subunit
BACIT_1962	COG4988	ABC transporter
BACIT_1963	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BACIT_1964	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BACIT_1965	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BACIT_1967	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
BACIT_1968	COG0753	catalase activity
BACIT_1970	COG1482	cell wall glycoprotein biosynthetic process
BACIT_1971	COG1940	carbohydrate kinase activity
BACIT_1972	COG2723	6-phospho-beta-galactosidase activity
BACIT_1973	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BACIT_1974	COG1447	Phosphotransferase system cellobiose-specific component IIA
BACIT_1975	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BACIT_1976	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BACIT_1977	COG0640	Transcriptional regulator
BACIT_1979	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BACIT_1980	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BACIT_1984	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BACIT_1984	COG3711	transcriptional antiterminator
BACIT_1985	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BACIT_1986	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BACIT_1987	COG1447	Phosphotransferase system cellobiose-specific component IIA
BACIT_1988	COG1486	melibiose metabolic process
BACIT_1989	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BACIT_1990	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BACIT_1992	COG1696	Membrane protein involved in D-alanine export
BACIT_1995	COG1575	Belongs to the MenA family. Type 1 subfamily
BACIT_1996	COG2357	RelA SpoT domain protein
BACIT_1999	COG1442	glycosyl transferase family 8
BACIT_2000	COG1404	Belongs to the peptidase S8 family
BACIT_2001	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BACIT_2002	COG0346	lactoylglutathione lyase activity
BACIT_2003	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BACIT_2004	COG5504	Zn-dependent protease
BACIT_2005	COG0789	Transcriptional regulator
BACIT_2006	COG4895	conserved protein (DUF2196)
BACIT_2008	COG1346	cytolysis
BACIT_2010	COG0583	DNA-binding transcription factor activity
BACIT_2013	COG2822	iron ion transport
BACIT_2014	COG2837	iron assimilation
BACIT_2015	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BACIT_2019	COG1309	transcriptional regulator
BACIT_2020	COG2246	polysaccharide biosynthetic process
BACIT_2021	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BACIT_2022	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
BACIT_2023	COG2261	transglycosylase associated protein
BACIT_2024	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BACIT_2025	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BACIT_2029	COG0454	-acetyltransferase
BACIT_2030	COG0772	Belongs to the SEDS family
BACIT_2031	COG0778	Nitroreductase
BACIT_2032	COG2801	Transposase and inactivated derivatives
BACIT_2033	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BACIT_2034	COG1404	Belongs to the peptidase S8 family
BACIT_2036	COG3711	transcriptional antiterminator
BACIT_2037	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BACIT_2037	COG1263	PTS System
BACIT_2041	COG0351	phosphomethylpyrimidine kinase
BACIT_2042	COG1695	Transcriptional regulator
BACIT_2045	COG1216	Glycosyl transferase, family 2
BACIT_2048	COG2233	PERMEase
BACIT_2049	COG2363	Small membrane protein
BACIT_2051	COG0463	Glycosyl transferase, family 2
BACIT_2052	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BACIT_2053	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BACIT_2054	COG0456	acetyltransferase
BACIT_2055	COG2089	acid synthase
BACIT_2056	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
BACIT_2057	COG3980	spore coat polysaccharide biosynthesis protein
BACIT_2058	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BACIT_2059	COG1088	dTDP-glucose 4,6-dehydratase activity
BACIT_2060	COG1091	dTDP-4-dehydrorhamnose reductase activity
BACIT_2061	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
BACIT_2066	COG0745	RESPONSE REGULATOR receiver
BACIT_2068	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BACIT_2069	COG1012	belongs to the aldehyde dehydrogenase family
BACIT_2070	COG4187	Peptidase family M20/M25/M40
BACIT_2071	COG0833	amino acid
BACIT_2072	COG2814	Major facilitator Superfamily
BACIT_2073	COG2814	Major facilitator Superfamily
BACIT_2079	COG0436	Aminotransferase
BACIT_2080	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_2082	COG0280	phosphate acetyltransferase
BACIT_2083	COG2855	membrane
BACIT_2084	COG0583	DNA-binding transcription factor activity
BACIT_2090	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BACIT_2091	COG1131	(ABC) transporter
BACIT_2093	COG1695	Transcriptional regulator
BACIT_2097	COG1078	dGTPase activity
BACIT_2098	COG3465	dGTPase activity
BACIT_2099	COG0531	amino acid
BACIT_2100	COG1846	Transcriptional regulator
BACIT_2101	COG1942	4-Oxalocrotonate Tautomerase
BACIT_2102	COG1994	Peptidase M50
BACIT_2105	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BACIT_2106	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BACIT_2107	COG0010	Belongs to the arginase family
BACIT_2113	COG0457	Tetratricopeptide repeat
BACIT_2114	COG3391	amine dehydrogenase activity
BACIT_2115	COG3391	amine dehydrogenase activity
BACIT_2116	COG4506	Protein conserved in bacteria
BACIT_2118	COG2223	nitrite transmembrane transporter activity
BACIT_2119	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BACIT_2121	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BACIT_2122	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BACIT_2123	COG1140	nitrate reductase beta subunit
BACIT_2124	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BACIT_2125	COG2181	nitrate reductase activity
BACIT_2127	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BACIT_2128	COG1132	(ABC) transporter
BACIT_2131	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BACIT_2132	COG0247	lactate metabolic process
BACIT_2132	COG2181	nitrate reductase activity
BACIT_2135	COG4821	SIS domain
BACIT_2136	COG2204	response regulator
BACIT_2137	COG0191	fructose-bisphosphate aldolase activity
BACIT_2139	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BACIT_2140	COG1494	fructose-1,6-bisphosphatase
BACIT_2142	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BACIT_2144	COG0281	malic enzyme
BACIT_2145	COG0679	Auxin Efflux Carrier
BACIT_2146	COG0789	Transcriptional regulator
BACIT_2147	COG0346	lactoylglutathione lyase activity
BACIT_2148	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BACIT_2149	COG2890	protein-(glutamine-N5) methyltransferase activity
BACIT_2153	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BACIT_2155	COG0009	L-threonylcarbamoyladenylate synthase
BACIT_2157	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BACIT_2158	COG0698	ribose 5-phosphate isomerase
BACIT_2165	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BACIT_2173	COG4836	Membrane
BACIT_2175	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BACIT_2176	COG2385	sporulation resulting in formation of a cellular spore
BACIT_2177	COG2304	oxidoreductase activity
BACIT_2179	COG2304	oxidoreductase activity
BACIT_2181	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BACIT_2183	COG0457	Tetratricopeptide repeat
BACIT_2184	COG1994	Peptidase M50
BACIT_2185	COG3237	CsbD-like
BACIT_2187	COG0831	urea catabolic process
BACIT_2190	COG1959	2 iron, 2 sulfur cluster binding
BACIT_2192	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BACIT_2196	COG1247	-acetyltransferase
BACIT_2197	COG0739	heme binding
BACIT_2199	COG0671	phosphoesterase, PA-phosphatase related
BACIT_2200	COG0772	Belongs to the SEDS family
BACIT_2201	COG0347	Belongs to the P(II) protein family
BACIT_2202	COG0004	ammonium transporteR
BACIT_2204	COG1335	isochorismatase
BACIT_2205	COG0477	Major facilitator Superfamily
BACIT_2206	COG1953	Uracil, thiamine, allantoin
BACIT_2207	COG2814	Major facilitator Superfamily
BACIT_2208	COG1846	Transcriptional regulator
BACIT_2209	COG1609	Transcriptional regulator
BACIT_2210	COG1077	Cell shape determining protein MreB Mrl
BACIT_2212	COG4786	Flagellar basal body rod
BACIT_2213	COG4786	Flagellar basal body rod
BACIT_2220	COG0629	single-stranded DNA binding
BACIT_2221	COG1349	DNA-binding transcription factor activity
BACIT_2222	COG0561	phosphatase activity
BACIT_2223	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BACIT_2224	COG4715	Zinc finger, swim domain protein
BACIT_2226	COG3944	biosynthesis protein
BACIT_2227	COG0489	protein tyrosine kinase activity
BACIT_2228	COG4464	protein tyrosine phosphatase activity
BACIT_2230	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BACIT_2231	COG3878	Protein conserved in bacteria
BACIT_2235	COG5444	nuclease activity
BACIT_2238	COG2801	Transposase and inactivated derivatives
BACIT_2244	COG2059	Chromate
BACIT_2245	COG2059	Chromate
BACIT_2246	COG1522	sequence-specific DNA binding
BACIT_2247	COG0405	Gamma-glutamyltransferase
BACIT_2248	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BACIT_2250	COG5337	Spore coat protein CotH
BACIT_2253	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BACIT_2255	COG0583	DNA-binding transcription factor activity
BACIT_2256	COG0028	Belongs to the TPP enzyme family
BACIT_2257	COG3527	Alpha-acetolactate decarboxylase
BACIT_2258	COG2249	NAD(P)H dehydrogenase (quinone) activity
BACIT_2259	COG3103	Sh3 type 3 domain protein
BACIT_2260	COG1879	ABC-type sugar transport system periplasmic component
BACIT_2261	COG1172	Belongs to the binding-protein-dependent transport system permease family
BACIT_2262	COG1129	ABC transporter
BACIT_2264	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BACIT_2265	COG1609	Transcriptional regulator
BACIT_2267	COG0814	amino acid
BACIT_2268	COG0697	spore germination
BACIT_2271	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BACIT_2273	COG2843	Capsule synthesis protein
BACIT_2276	COG0791	NLP P60 protein
BACIT_2277	COG2433	Pfam Transposase IS66
BACIT_2279	COG0561	phosphatase activity
BACIT_2280	COG1316	TRANSCRIPTIONal
BACIT_2282	COG2814	Major facilitator Superfamily
BACIT_2283	COG1215	transferase activity, transferring glycosyl groups
BACIT_2285	COG0814	amino acid
BACIT_2286	COG0697	spore germination
BACIT_2288	COG1482	cell wall glycoprotein biosynthetic process
BACIT_2290	COG4193	domain, Protein
BACIT_2291	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BACIT_2292	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
BACIT_2296	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BACIT_2297	COG1682	transport, permease protein
BACIT_2298	COG1134	teichoic acid transport
BACIT_2299	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BACIT_2300	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BACIT_2301	COG1316	TRANSCRIPTIONal
BACIT_2303	COG2247	cell wall binding repeat
BACIT_2303	COG2385	sporulation resulting in formation of a cellular spore
BACIT_2304	COG2247	cell wall binding repeat
BACIT_2304	COG0860	N-Acetylmuramoyl-L-alanine amidase
BACIT_2306	COG2244	polysaccharide biosynthetic process
BACIT_2307	COG0297	glycogen (starch) synthase activity
BACIT_2307	COG0438	transferase activity, transferring glycosyl groups
BACIT_2308	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BACIT_2309	COG3307	-O-antigen
BACIT_2310	COG3206	protein involved in exopolysaccharide biosynthesis
BACIT_2311	COG1215	transferase activity, transferring glycosyl groups
BACIT_2312	COG0438	transferase activity, transferring glycosyl groups
BACIT_2313	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BACIT_2314	COG1316	TRANSCRIPTIONal
BACIT_2317	COG4585	Histidine kinase
BACIT_2318	COG2197	response regulator
BACIT_2319	COG1307	EDD domain protein, DegV family
BACIT_2320	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
BACIT_2323	COG1040	competence protein
BACIT_2325	COG2747	anti-sigma28 factor FlgM
BACIT_2326	COG3418	PFAM FlgN family protein
BACIT_2327	COG4786	Flagellar basal body rod
BACIT_2327	COG1256	bacterial-type flagellum assembly
BACIT_2328	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BACIT_2332	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BACIT_2333	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BACIT_2334	COG1516	flagellar protein fliS
BACIT_2337	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BACIT_2339	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BACIT_2340	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BACIT_2341	COG2010	Cytochrome c
BACIT_2342	COG2884	Cell division ATP-binding protein ftsE
BACIT_2343	COG2177	Part of the ABC transporter FtsEX involved in
BACIT_2346	COG3409	Peptidoglycan-binding domain 1 protein
BACIT_2346	COG0793	Belongs to the peptidase S41A family
BACIT_2348	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BACIT_2349	COG2814	Major facilitator Superfamily
BACIT_2350	COG1309	transcriptional regulator
BACIT_2351	COG3848	Pyruvate phosphate dikinase
BACIT_2351	COG0574	Belongs to the PEP-utilizing enzyme family
BACIT_2352	COG4897	Protein conserved in bacteria
BACIT_2354	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BACIT_2357	COG3595	metallopeptidase activity
BACIT_2358	COG1983	PspC domain protein
BACIT_2359	COG1950	PFAM Membrane protein of
BACIT_2360	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BACIT_2361	COG1309	transcriptional regulator
BACIT_2364	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BACIT_2369	COG0110	maltose O-acetyltransferase activity
BACIT_2370	COG4990	cell redox homeostasis
BACIT_2373	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BACIT_2378	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BACIT_2378	COG0140	phosphoribosyl-ATP diphosphatase activity
BACIT_2379	COG1132	(ABC) transporter
BACIT_2380	COG0745	RESPONSE REGULATOR receiver
BACIT_2381	COG5002	protein histidine kinase activity
BACIT_2382	COG0457	Tetratricopeptide repeat
BACIT_2384	COG0791	NLP P60 protein
BACIT_2384	COG3883	PFAM NLP P60 protein
BACIT_2385	COG0492	ferredoxin-NADP+ reductase activity
BACIT_2387	COG1051	belongs to the nudix hydrolase family
BACIT_2389	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BACIT_2391	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BACIT_2392	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BACIT_2393	COG4290	ribonuclease
BACIT_2394	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BACIT_2396	COG0288	reversible hydration of carbon dioxide
BACIT_2397	COG0659	secondary active sulfate transmembrane transporter activity
BACIT_2398	COG1694	Mazg nucleotide pyrophosphohydrolase
BACIT_2399	COG1611	Belongs to the LOG family
BACIT_2402	COG2828	Protein conserved in bacteria
BACIT_2403	COG0583	DNA-binding transcription factor activity
BACIT_2406	COG1609	Transcriptional regulator
BACIT_2407	COG2223	nitrite transmembrane transporter activity
BACIT_2417	COG3479	Phenolic acid decarboxylase
BACIT_2418	COG0456	acetyltransferase
BACIT_2421	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BACIT_2422	COG2272	Belongs to the type-B carboxylesterase lipase family
BACIT_2423	COG1396	sequence-specific DNA binding
BACIT_2424	COG3944	biosynthesis protein
BACIT_2425	COG0489	protein tyrosine kinase activity
BACIT_2426	COG1086	Polysaccharide biosynthesis protein
BACIT_2427	COG0438	transferase activity, transferring glycosyl groups
BACIT_2428	COG1215	transferase activity, transferring glycosyl groups
BACIT_2429	COG0438	transferase activity, transferring glycosyl groups
BACIT_2431	COG1216	Glycosyl transferase, family 2
BACIT_2432	COG5039	Polysaccharide pyruvyl transferase
BACIT_2433	COG1216	Glycosyl transferase, family 2
BACIT_2434	COG2244	polysaccharide biosynthetic process
BACIT_2435	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BACIT_2436	COG0110	maltose O-acetyltransferase activity
BACIT_2437	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BACIT_2438	COG5039	Polysaccharide pyruvyl transferase
BACIT_2440	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BACIT_2441	COG1620	l-lactate permease
BACIT_2442	COG2186	Transcriptional regulator
BACIT_2443	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BACIT_2448	COG1070	Carbohydrate kinase
BACIT_2449	COG1737	Transcriptional regulator
BACIT_2450	COG0561	phosphatase activity
BACIT_2452	COG1609	Transcriptional regulator
BACIT_2454	COG1113	amino acid transport
BACIT_2455	COG0697	spore germination
BACIT_2456	COG0583	DNA-binding transcription factor activity
BACIT_2458	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BACIT_2459	COG1609	Transcriptional regulator
BACIT_2460	COG2814	Major facilitator Superfamily
BACIT_2461	COG2390	Transcriptional regulator
BACIT_2462	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BACIT_2464	COG0126	phosphoglycerate kinase activity
BACIT_2468	COG2234	aminopeptidase activity
BACIT_2470	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BACIT_2471	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BACIT_2472	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BACIT_2475	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BACIT_2478	COG0456	acetyltransferase
BACIT_2481	COG3064	Membrane
BACIT_2484	COG2095	MarC family integral membrane protein
BACIT_2485	COG1510	regulation of RNA biosynthetic process
BACIT_2486	COG0517	IMP dehydrogenase activity
BACIT_2486	COG1125	glycine betaine transport
BACIT_2487	COG1174	glycine betaine transport
BACIT_2488	COG1732	Glycine betaine
BACIT_2489	COG1174	glycine betaine transport
BACIT_2490	COG1510	regulation of RNA biosynthetic process
BACIT_2491	COG0517	IMP dehydrogenase activity
BACIT_2491	COG1125	glycine betaine transport
BACIT_2492	COG1174	glycine betaine transport
BACIT_2493	COG1732	Glycine betaine
BACIT_2494	COG1174	glycine betaine transport
BACIT_2500	COG1733	regulation of RNA biosynthetic process
BACIT_2501	COG1396	sequence-specific DNA binding
BACIT_2502	COG1396	sequence-specific DNA binding
BACIT_2503	COG1476	TRANSCRIPTIONal
BACIT_2504	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BACIT_2505	COG1647	Serine aminopeptidase, S33
BACIT_2506	COG0557	exoribonuclease II activity
BACIT_2508	COG2732	(Barnase) inhibitor
BACIT_2509	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_2510	COG0583	DNA-binding transcription factor activity
BACIT_2511	COG0454	-acetyltransferase
BACIT_2512	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BACIT_2513	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BACIT_2514	COG0765	amino acid transport
BACIT_2515	COG0765	amino acid transport
BACIT_2516	COG1126	abc transporter atp-binding protein
BACIT_2517	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BACIT_2518	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BACIT_2519	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BACIT_2522	COG2814	Major facilitator Superfamily
BACIT_2525	COG0673	inositol 2-dehydrogenase activity
BACIT_2526	COG1937	Protein conserved in bacteria
BACIT_2527	COG2608	mercury ion transmembrane transporter activity
BACIT_2528	COG2217	Heavy metal translocating P-type atpase
BACIT_2529	COG2217	Heavy metal translocating P-type atpase
BACIT_2530	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BACIT_2531	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BACIT_2533	COG2860	membrane
BACIT_2534	COG3973	AAA domain
BACIT_2535	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BACIT_2539	COG0656	L-ascorbic acid biosynthetic process
BACIT_2540	COG0842	Transport permease protein
BACIT_2542	COG1131	(ABC) transporter
BACIT_2543	COG3850	Histidine kinase
BACIT_2544	COG2197	response regulator
BACIT_2545	COG4149	molybdate abc transporter
BACIT_2546	COG0725	ABC transporter, periplasmic molybdate-binding protein
BACIT_2547	COG1910	domain protein
BACIT_2548	COG1368	sulfuric ester hydrolase activity
BACIT_2549	COG1988	membrane-bound metal-dependent
BACIT_2551	COG0531	amino acid
BACIT_2552	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BACIT_2554	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BACIT_2555	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BACIT_2556	COG1120	ATPase activity
BACIT_2558	COG2140	Oxalate decarboxylase
BACIT_2560	COG1191	sigma factor activity
BACIT_2562	COG0745	RESPONSE REGULATOR receiver
BACIT_2563	COG2205	protein histidine kinase activity
BACIT_2564	COG3386	PFAM SMP-30 Gluconolaconase
BACIT_2565	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_2566	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BACIT_2567	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BACIT_2568	COG1120	ATPase activity
BACIT_2569	COG2096	Adenosyltransferase
BACIT_2570	COG2814	Major facilitator Superfamily
BACIT_2571	COG4758	membrane
BACIT_2572	COG1842	Phage shock protein A
BACIT_2573	COG3595	metallopeptidase activity
BACIT_2574	COG4758	membrane
BACIT_2575	COG4585	Histidine kinase
BACIT_2576	COG2197	response regulator
BACIT_2578	COG0814	amino acid
BACIT_2579	COG0697	spore germination
BACIT_2581	COG0114	fumarate hydratase activity
BACIT_2582	COG1309	transcriptional regulator
BACIT_2584	COG2770	Histidine kinase
BACIT_2584	COG2205	protein histidine kinase activity
BACIT_2585	COG0745	RESPONSE REGULATOR receiver
BACIT_2587	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BACIT_2588	COG0783	Belongs to the Dps family
BACIT_2593	COG1120	ATPase activity
BACIT_2600	COG0583	DNA-binding transcription factor activity
BACIT_2601	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_2602	COG1942	4-Oxalocrotonate Tautomerase
BACIT_2603	COG0477	Major facilitator Superfamily
BACIT_2604	COG1846	Transcriptional regulator
BACIT_2605	COG5577	PFAM Coat F domain
BACIT_2610	COG1024	Enoyl-CoA hydratase
BACIT_2610	COG1250	3-hydroxyacyl-CoA dehydrogenase
BACIT_2611	COG0183	Belongs to the thiolase family
BACIT_2614	COG1393	Belongs to the ArsC family
BACIT_2617	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BACIT_2618	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BACIT_2621	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BACIT_2622	COG2011	ABC-type metal ion transport system permease component
BACIT_2623	COG1464	Belongs to the NlpA lipoprotein family
BACIT_2624	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BACIT_2626	COG0396	ATPase activity
BACIT_2627	COG0719	Fe-S assembly protein
BACIT_2628	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BACIT_2629	COG0822	iron-sulfur transferase activity
BACIT_2630	COG0719	Fe-S assembly protein
BACIT_2631	COG3409	Peptidoglycan-binding domain 1 protein
BACIT_2633	COG2226	methyltransferase
BACIT_2634	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BACIT_2635	COG0322	excinuclease ABC activity
BACIT_2638	COG0789	Transcriptional regulator
BACIT_2639	COG2222	sugar isomerase
BACIT_2640	COG1653	transport
BACIT_2641	COG1175	transmembrane transport
BACIT_2642	COG0395	ABC-type sugar transport system, permease component
BACIT_2643	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BACIT_2644	COG2188	Transcriptional regulator
BACIT_2645	COG3842	ATPase activity
BACIT_2646	COG2356	endonuclease I
BACIT_2647	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BACIT_2648	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BACIT_2649	COG2814	Major facilitator Superfamily
BACIT_2651	COG2508	Transcriptional regulator
BACIT_2654	COG1801	Protein of unknown function DUF72
BACIT_2655	COG0730	response to heat
BACIT_2656	COG0737	Belongs to the 5'-nucleotidase family
BACIT_2658	COG0739	heme binding
BACIT_2661	COG4470	Protein conserved in bacteria
BACIT_2662	COG2445	Protein of unknown function DUF86
BACIT_2663	COG0647	UMP catabolic process
BACIT_2664	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BACIT_2665	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BACIT_2666	COG0460	homoserine dehydrogenase
BACIT_2667	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BACIT_2669	COG1506	peptidase
BACIT_2669	COG4946	Tricorn protease homolog
BACIT_2669	COG0823	Involved in the tonB-independent uptake of proteins
BACIT_2670	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BACIT_2671	COG4837	Protein of unknown function (DUF1462)
BACIT_2672	COG1252	NADH dehydrogenase
BACIT_2674	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BACIT_2676	COG0316	Belongs to the HesB IscA family
BACIT_2677	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
BACIT_2678	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BACIT_2682	COG1131	(ABC) transporter
BACIT_2689	COG1252	NADH dehydrogenase
BACIT_2692	COG3584	3D domain protein
BACIT_2693	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
BACIT_2695	COG2056	Na+-H+ antiporter family
BACIT_2696	COG1268	BioY protein
BACIT_2697	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BACIT_2698	COG2819	hydrolase of the alpha beta superfamily
BACIT_2699	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_2700	COG1169	isochorismate synthase
BACIT_2701	COG1021	2,3-dihydroxybenzoate-AMP ligase
BACIT_2702	COG3433	isochorismatase activity
BACIT_2702	COG1535	isochorismatase
BACIT_2703	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_2704	COG3251	PFAM MbtH domain protein
BACIT_2705	COG5634	Uncharacterized conserved protein (DUF2278)
BACIT_2706	COG0686	Belongs to the AlaDH PNT family
BACIT_2709	COG4842	Belongs to the WXG100 family
BACIT_2710	COG5417	Belongs to the EsaB family
BACIT_2711	COG4499	WXG100 protein secretion system (Wss), protein YukC
BACIT_2712	COG0433	COG0433 Predicted ATPase
BACIT_2712	COG1674	ftsk spoiiie
BACIT_2713	COG1511	domain protein
BACIT_2715	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_2716	COG1418	mRNA catabolic process
BACIT_2718	COG0628	permease
BACIT_2721	COG5506	Protein of unknown function (DUF1694)
BACIT_2722	COG1335	isochorismatase
BACIT_2723	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BACIT_2724	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BACIT_2730	COG4585	Histidine kinase
BACIT_2731	COG4585	Histidine kinase
BACIT_2732	COG2197	response regulator
BACIT_2733	COG2050	protein possibly involved in aromatic compounds catabolism
BACIT_2734	COG1320	monovalent cation:proton antiporter activity
BACIT_2735	COG2212	antiporter activity
BACIT_2736	COG1863	multisubunit Na H antiporter MnhE subunit
BACIT_2737	COG0651	ATP synthesis coupled electron transport
BACIT_2738	COG1006	Multisubunit Na H antiporter MnhC subunit
BACIT_2739	COG2111	Na H antiporter
BACIT_2740	COG2111	Na H antiporter
BACIT_2740	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BACIT_2748	COG4565	transcriptional regulatory protein
BACIT_2749	COG3290	protein histidine kinase activity
BACIT_2751	COG3011	Protein conserved in bacteria
BACIT_2752	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BACIT_2753	COG2814	Major facilitator Superfamily
BACIT_2754	COG5018	Exonuclease
BACIT_2758	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BACIT_2760	COG2267	carboxylic ester hydrolase activity
BACIT_2761	COG1522	sequence-specific DNA binding
BACIT_2762	COG0436	Aminotransferase
BACIT_2763	COG1098	S1 RNA binding domain
BACIT_2764	COG2155	Conserved Protein
BACIT_2766	COG1979	alcohol dehydrogenase
BACIT_2767	COG1979	alcohol dehydrogenase
BACIT_2769	COG1335	isochorismatase
BACIT_2774	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BACIT_2777	COG2738	Putative neutral zinc metallopeptidase
BACIT_2778	COG1253	flavin adenine dinucleotide binding
BACIT_2779	COG0366	Alpha amylase catalytic
BACIT_2780	COG0432	Pfam Uncharacterised protein family UPF0047
BACIT_2781	COG2070	2-Nitropropane dioxygenase
BACIT_2783	COG0840	transmembrane signaling receptor activity
BACIT_2784	COG0840	transmembrane signaling receptor activity
BACIT_2785	COG0840	transmembrane signaling receptor activity
BACIT_2786	COG0840	transmembrane signaling receptor activity
BACIT_2787	COG0693	protein deglycase activity
BACIT_2788	COG0673	inositol 2-dehydrogenase activity
BACIT_2789	COG0628	permease
BACIT_2794	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BACIT_2794	COG1017	nitric oxide dioxygenase activity
BACIT_2795	COG1705	Flagellar rod assembly protein muramidase FlgJ
BACIT_2796	COG0569	domain protein
BACIT_2798	COG1510	regulation of RNA biosynthetic process
BACIT_2801	COG1454	alcohol dehydrogenase
BACIT_2803	COG2318	DinB family
BACIT_2804	COG1585	Membrane protein implicated in regulation of membrane protease activity
BACIT_2805	COG2268	Band 7 protein
BACIT_2806	COG3859	Proton-coupled thiamine transporter YuaJ
BACIT_2808	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
BACIT_2809	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BACIT_2810	COG1169	isochorismate synthase
BACIT_2812	COG0596	Alpha beta hydrolase
BACIT_2813	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BACIT_2815	COG4948	Mandelate Racemase Muconate Lactonizing
BACIT_2818	COG1294	oxidase, subunit
BACIT_2819	COG1271	oxidase subunit
BACIT_2821	COG0288	reversible hydration of carbon dioxide
BACIT_2826	COG0783	Belongs to the Dps family
BACIT_2827	COG4824	toxin secretion phage lysis holin
BACIT_2828	COG0494	nUDIX hydrolase
BACIT_2829	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BACIT_2830	COG1116	anion transmembrane transporter activity
BACIT_2831	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BACIT_2832	COG1506	peptidase
BACIT_2836	COG0367	asparagine synthase
BACIT_2837	COG1113	amino acid transport
BACIT_2839	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BACIT_2840	COG2267	carboxylic ester hydrolase activity
BACIT_2842	COG0584	glycerophosphoryl diester phosphodiesterase
BACIT_2844	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BACIT_2845	COG1242	4 iron, 4 sulfur cluster binding
BACIT_2846	COG0477	Major facilitator Superfamily
BACIT_2861	COG1725	Transcriptional regulator
BACIT_2862	COG1131	(ABC) transporter
BACIT_2866	COG1136	(ABC) transporter
BACIT_2867	COG0577	efflux transmembrane transporter activity
BACIT_2868	COG0745	RESPONSE REGULATOR receiver
BACIT_2869	COG2205	protein histidine kinase activity
BACIT_2870	COG1136	(ABC) transporter
BACIT_2871	COG0577	efflux transmembrane transporter activity
BACIT_2873	COG5522	Integral membrane protein (intg_mem_TP0381)
BACIT_2874	COG2814	Major facilitator Superfamily
BACIT_2875	COG1366	Belongs to the anti-sigma-factor antagonist family
BACIT_2875	COG2202	Pas domain
BACIT_2879	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BACIT_2881	COG1486	melibiose metabolic process
BACIT_2889	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BACIT_2890	COG2081	HI0933 family
BACIT_2892	COG2244	polysaccharide biosynthetic process
BACIT_2893	COG1187	pseudouridine synthase activity
BACIT_2896	COG1131	(ABC) transporter
BACIT_2897	COG4473	ABC transporter
BACIT_2898	COG2252	PERMEase
BACIT_2899	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BACIT_2900	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BACIT_2901	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BACIT_2903	COG1597	lipid kinase activity
BACIT_2904	COG0510	thiamine kinase activity
BACIT_2907	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BACIT_2908	COG0281	malic enzyme
BACIT_2909	COG5584	Small secreted protein
BACIT_2910	COG1363	Peptidase, m42
BACIT_2912	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BACIT_2914	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BACIT_2915	COG1674	ftsk spoiiie
BACIT_2918	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BACIT_2919	COG4980	gas vesicle protein
BACIT_2920	COG3118	belongs to the thioredoxin family
BACIT_2921	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
BACIT_2921	COG1605	Chorismate mutase
BACIT_2922	COG1609	Transcriptional regulator
BACIT_2923	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BACIT_2924	COG1360	Flagellar Motor Protein
BACIT_2925	COG0123	including yeast histone deacetylase and acetoin utilization protein
BACIT_2926	COG0517	IMP dehydrogenase activity
BACIT_2927	COG0454	-acetyltransferase
BACIT_2928	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BACIT_2934	COG1378	Sugar-specific transcriptional regulator TrmB
BACIT_2935	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BACIT_2939	COG0693	protein deglycase activity
BACIT_2941	COG1017	nitric oxide dioxygenase activity
BACIT_2941	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BACIT_2943	COG0305	Participates in initiation and elongation during chromosome replication
BACIT_2947	COG1595	DNA-templated transcription, initiation
BACIT_2950	COG4282	regulation of fungal-type cell wall biogenesis
BACIT_2951	COG1012	belongs to the aldehyde dehydrogenase family
BACIT_2954	COG2203	Gaf domain
BACIT_2954	COG2199	diguanylate cyclase activity
BACIT_2955	COG1956	GAF domain-containing protein
BACIT_2956	COG1309	transcriptional regulator
BACIT_2957	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BACIT_2960	COG1114	Component of the transport system for branched-chain amino acids
BACIT_2961	COG1104	cysteine desulfurase activity
BACIT_2964	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BACIT_2965	COG1574	metal-dependent hydrolase with the TIM-barrel fold
BACIT_2966	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BACIT_2967	COG0616	signal peptide processing
BACIT_2968	COG1714	RDD family
BACIT_2971	COG3874	Sporulation protein YtfJ
BACIT_2972	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BACIT_2973	COG0827	DNA restriction-modification system
BACIT_2975	COG0521	Mo-molybdopterin cofactor biosynthetic process
BACIT_2979	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_2981	COG4109	DRTGG domain
BACIT_2983	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
BACIT_2987	COG0587	DNA-directed DNA polymerase activity
BACIT_2988	COG0281	malic enzyme
BACIT_2993	COG0469	pyruvate kinase activity
BACIT_2994	COG3030	protein affecting phage T7 exclusion by the F plasmid
BACIT_2995	COG0628	permease
BACIT_2999	COG0372	Belongs to the citrate synthase family
BACIT_3000	COG0538	isocitrate dehydrogenase activity
BACIT_3002	COG0745	RESPONSE REGULATOR receiver
BACIT_3003	COG5002	protein histidine kinase activity
BACIT_3005	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BACIT_3005	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BACIT_3006	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BACIT_3007	COG1971	Probably functions as a manganese efflux pump
BACIT_3008	COG0237	dephospho-CoA kinase activity
BACIT_3009	COG0656	L-ascorbic acid biosynthetic process
BACIT_3010	COG2814	Major facilitator Superfamily
BACIT_3011	COG1733	regulation of RNA biosynthetic process
BACIT_3013	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BACIT_3017	COG3611	Membrane attachment protein
BACIT_3018	COG1484	DNA-dependent DNA replication
BACIT_3019	COG0398	Pfam SNARE associated Golgi protein
BACIT_3024	COG3275	phosphorelay sensor kinase activity
BACIT_3025	COG3275	phosphorelay sensor kinase activity
BACIT_3026	COG3279	Response regulator of the LytR AlgR family
BACIT_3027	COG1380	Effector of murein hydrolase LrgA
BACIT_3028	COG1346	cytolysis
BACIT_3029	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BACIT_3031	COG3326	Membrane
BACIT_3034	COG1363	Peptidase, m42
BACIT_3035	COG3507	Belongs to the glycosyl hydrolase 43 family
BACIT_3036	COG2160	L-arabinose isomerase activity
BACIT_3037	COG1069	ribulokinase activity
BACIT_3038	COG0235	Class ii aldolase
BACIT_3039	COG0647	UMP catabolic process
BACIT_3041	COG1653	transport
BACIT_3042	COG1175	transmembrane transport
BACIT_3043	COG0395	ABC-type sugar transport system, permease component
BACIT_3044	COG3534	alpha-L-arabinofuranosidase
BACIT_3045	COG1966	Carbon starvation protein
BACIT_3047	COG0247	lactate metabolic process
BACIT_3048	COG0277	FAD linked oxidase domain protein
BACIT_3049	COG3835	regulator
BACIT_3051	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BACIT_3053	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BACIT_3054	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BACIT_3054	COG0072	phenylalanine-tRNA ligase activity
BACIT_3057	COG1286	toxin biosynthetic process
BACIT_3061	COG3766	membrane
BACIT_3065	COG1309	transcriptional regulator
BACIT_3066	COG1024	Enoyl-CoA hydratase
BACIT_3067	COG2086	electron transfer activity
BACIT_3068	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BACIT_3069	COG3534	alpha-L-arabinofuranosidase
BACIT_3071	COG3118	belongs to the thioredoxin family
BACIT_3073	COG0527	aspartate kinase activity
BACIT_3074	COG1719	4-vinyl reductase, 4VR
BACIT_3075	COG2009	succinate dehydrogenase
BACIT_3076	COG1053	succinate dehydrogenase
BACIT_3077	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BACIT_3078	COG0824	Thioesterase
BACIT_3079	COG2197	response regulator
BACIT_3080	COG1846	Transcriptional regulator
BACIT_3082	COG5401	PFAM Sporulation and spore germination
BACIT_3084	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BACIT_3085	COG0622	Phosphoesterase
BACIT_3090	COG0028	Belongs to the TPP enzyme family
BACIT_3091	COG0440	acetolactate synthase activity
BACIT_3095	COG0473	3-isopropylmalate dehydrogenase activity
BACIT_3099	COG1477	protein flavinylation
BACIT_3099	COG0457	Tetratricopeptide repeat
BACIT_3102	COG0470	DNA polymerase III
BACIT_3102	COG1067	ATP-dependent peptidase activity
BACIT_3108	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BACIT_3110	COG1587	Uroporphyrinogen-III synthase
BACIT_3111	COG0113	porphobilinogen synthase activity
BACIT_3116	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BACIT_3117	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BACIT_3120	COG0525	valine-tRNA ligase activity
BACIT_3121	COG0285	dihydrofolate synthase activity
BACIT_3127	COG1077	Cell shape determining protein MreB Mrl
BACIT_3128	COG1792	Involved in formation and maintenance of cell shape
BACIT_3129	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BACIT_3131	COG2894	cell division
BACIT_3132	COG0739	heme binding
BACIT_3133	COG1994	Peptidase M50
BACIT_3135	COG2868	ribosomal protein
BACIT_3136	COG0211	Belongs to the bacterial ribosomal protein bL27 family
BACIT_3137	COG3290	protein histidine kinase activity
BACIT_3140	COG0077	Prephenate dehydratase
BACIT_3141	COG1827	regulation of RNA biosynthetic process
BACIT_3142	COG1104	cysteine desulfurase activity
BACIT_3143	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BACIT_3144	COG0157	Belongs to the NadC ModD family
BACIT_3146	COG1388	LysM domain
BACIT_3155	COG1862	Preprotein translocase
BACIT_3157	COG2323	membrane
BACIT_3158	COG2244	polysaccharide biosynthetic process
BACIT_3160	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BACIT_3160	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BACIT_3161	COG0490	domain, Protein
BACIT_3162	COG5416	Lipopolysaccharide assembly protein A domain
BACIT_3163	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
BACIT_3163	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BACIT_3165	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BACIT_3172	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BACIT_3173	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BACIT_3175	COG1959	2 iron, 2 sulfur cluster binding
BACIT_3176	COG1104	cysteine desulfurase activity
BACIT_3178	COG0457	Tetratricopeptide repeat
BACIT_3179	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BACIT_3180	COG3881	PFAM PRC-barrel domain
BACIT_3183	COG0765	amino acid transport
BACIT_3184	COG0765	amino acid transport
BACIT_3185	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BACIT_3186	COG1126	abc transporter atp-binding protein
BACIT_3193	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BACIT_3199	COG0768	penicillin binding
BACIT_3205	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BACIT_3206	COG0626	cystathionine gamma-synthase activity
BACIT_3208	COG2427	Protein of unknown function (DUF1641)
BACIT_3209	COG3383	formate dehydrogenase (NAD+) activity
BACIT_3210	COG5609	conserved protein (DUF2294)
BACIT_3211	COG2116	formate transmembrane transporter activity
BACIT_3214	COG2226	methyltransferase
BACIT_3215	COG1309	transcriptional regulator
BACIT_3216	COG2124	cytochrome p450
BACIT_3216	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BACIT_3217	COG2814	Major facilitator Superfamily
BACIT_3218	COG0583	DNA-binding transcription factor activity
BACIT_3219	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BACIT_3223	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BACIT_3223	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BACIT_3223	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BACIT_3224	COG1482	cell wall glycoprotein biosynthetic process
BACIT_3230	COG0561	phosphatase activity
BACIT_3232	COG2318	DinB family
BACIT_3233	COG0456	acetyltransferase
BACIT_3234	COG0563	adenylate kinase activity
BACIT_3236	COG0454	-acetyltransferase
BACIT_3237	COG2311	Membrane
BACIT_3238	COG0745	RESPONSE REGULATOR receiver
BACIT_3239	COG0642	Histidine kinase
BACIT_3239	COG5002	protein histidine kinase activity
BACIT_3246	COG0398	Pfam SNARE associated Golgi protein
BACIT_3248	COG0726	polysaccharide deacetylase
BACIT_3249	COG2755	lipolytic protein G-D-S-L family
BACIT_3252	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
BACIT_3253	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BACIT_3254	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BACIT_3255	COG1534	Rna-binding protein
BACIT_3257	COG1713	HD superfamily hydrolase involved in NAD metabolism
BACIT_3258	COG0799	negative regulation of ribosome biogenesis
BACIT_3259	COG2226	methyltransferase
BACIT_3260	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BACIT_3261	COG1555	photosystem II stabilization
BACIT_3261	COG1596	polysaccharide export
BACIT_3262	COG2131	deaminase
BACIT_3263	COG2333	competence protein COMEC
BACIT_3263	COG0658	competence protein
BACIT_3265	COG1466	dna polymerase III delta subunit
BACIT_3268	COG0860	N-Acetylmuramoyl-L-alanine amidase
BACIT_3272	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BACIT_3279	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BACIT_3280	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BACIT_3281	COG1283	sodium-dependent phosphate transmembrane transporter activity
BACIT_3282	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BACIT_3283	COG1610	YqeY-like protein
BACIT_3284	COG1030	water channel activity
BACIT_3285	COG4864	UPF0365 protein
BACIT_3288	COG0561	phosphatase activity
BACIT_3289	COG1702	phosphate starvation-inducible protein PhoH
BACIT_3290	COG1480	7TM receptor with intracellular HD hydrolase
BACIT_3292	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BACIT_3293	COG0295	cytidine deaminase activity
BACIT_3294	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BACIT_3298	COG0751	glycine-tRNA ligase activity
BACIT_3299	COG0517	IMP dehydrogenase activity
BACIT_3302	COG0358	DNA primase activity
BACIT_3303	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BACIT_3305	COG2010	Cytochrome c
BACIT_3306	COG2384	SAM-dependent methyltransferase
BACIT_3307	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BACIT_3310	COG0513	Belongs to the DEAD box helicase family
BACIT_3313	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BACIT_3314	COG0735	belongs to the Fur family
BACIT_3315	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
BACIT_3316	COG4709	membrane
BACIT_3318	COG1388	LysM domain
BACIT_3319	COG5521	maltodextrose utilization protein MalA
BACIT_3320	COG2839	Protein conserved in bacteria
BACIT_3321	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BACIT_3322	COG0477	Major facilitator Superfamily
BACIT_3324	COG2801	Transposase and inactivated derivatives
BACIT_3327	COG0573	inorganic phosphate transmembrane transporter activity
BACIT_3328	COG0581	inorganic phosphate transmembrane transporter activity
BACIT_3329	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BACIT_3330	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BACIT_3331	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BACIT_3334	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BACIT_3336	COG1757	Na H antiporter
BACIT_3337	COG4483	Protein conserved in bacteria
BACIT_3338	COG1940	carbohydrate kinase activity
BACIT_3339	COG2866	Carboxypeptidase
BACIT_3341	COG0011	TIGRFAM Protein of
BACIT_3343	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BACIT_3345	COG1393	Belongs to the ArsC family
BACIT_3346	COG1366	Belongs to the anti-sigma-factor antagonist family
BACIT_3347	COG1253	flavin adenine dinucleotide binding
BACIT_3348	COG0598	Magnesium transport protein CorA
BACIT_3349	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BACIT_3352	COG4537	Required for transformation and DNA binding
BACIT_3353	COG4970	Tfp pilus assembly protein FimT
BACIT_3355	COG4940	Competence protein ComGF
BACIT_3360	COG0681	Belongs to the peptidase S26 family
BACIT_3362	COG1396	sequence-specific DNA binding
BACIT_3365	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BACIT_3370	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BACIT_3374	COG1752	Esterase of the alpha-beta hydrolase superfamily
BACIT_3376	COG3872	metal-dependent enzyme
BACIT_3378	COG0006	proline dipeptidase activity
BACIT_3381	COG3854	ATPases associated with a variety of cellular activities
BACIT_3392	COG0439	Biotin carboxylase
BACIT_3393	COG1302	Protein conserved in bacteria
BACIT_3397	COG1570	exodeoxyribonuclease VII activity
BACIT_3399	COG0142	geranyltranstransferase activity
BACIT_3401	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
BACIT_3403	COG0497	DNA recombination
BACIT_3404	COG0750	zinc metalloprotease
BACIT_3405	COG0745	RESPONSE REGULATOR receiver
BACIT_3406	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BACIT_3409	COG1902	pentaerythritol trinitrate reductase activity
BACIT_3415	COG0860	N-Acetylmuramoyl-L-alanine amidase
BACIT_3416	COG0584	glycerophosphoryl diester phosphodiesterase
BACIT_3417	COG0183	Belongs to the thiolase family
BACIT_3418	COG1250	3-hydroxyacyl-CoA dehydrogenase
BACIT_3419	COG1960	acyl-CoA dehydrogenase activity
BACIT_3420	COG0372	Belongs to the citrate synthase family
BACIT_3421	COG2079	MmgE PrpD family protein
BACIT_3422	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BACIT_3424	COG3829	transcription factor binding
BACIT_3424	COG3290	protein histidine kinase activity
BACIT_3425	COG0280	phosphate acetyltransferase
BACIT_3426	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BACIT_3427	COG3426	butyrate kinase activity
BACIT_3428	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BACIT_3429	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BACIT_3430	COG0022	dehydrogenase e1 component
BACIT_3431	COG0508	dehydrogenase complex catalyzes the overall conversion of
BACIT_3432	COG1597	lipid kinase activity
BACIT_3434	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BACIT_3435	COG0765	amino acid transport
BACIT_3436	COG1126	abc transporter atp-binding protein
BACIT_3437	COG4129	membrane
BACIT_3438	COG1376	ErfK ybiS ycfS ynhG family protein
BACIT_3439	COG0346	lactoylglutathione lyase activity
BACIT_3440	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BACIT_3441	COG2195	Cleaves the N-terminal amino acid of tripeptides
BACIT_3442	COG0706	membrane insertase activity
BACIT_3445	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BACIT_3446	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BACIT_3449	COG0596	Alpha beta hydrolase
BACIT_3456	COG0250	Participates in transcription elongation, termination and antitermination
BACIT_3457	COG2070	2-Nitropropane dioxygenase
BACIT_3457	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BACIT_3460	COG0318	PFAM AMP-dependent synthetase and ligase
BACIT_3461	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_3464	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_3464	COG3321	synthase
BACIT_3464	COG0318	PFAM AMP-dependent synthetase and ligase
BACIT_3464	COG0300	oxidoreductase activity
BACIT_3464	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_3465	COG3321	synthase
BACIT_3465	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_3465	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_3465	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BACIT_3465	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BACIT_3469	COG0318	PFAM AMP-dependent synthetase and ligase
BACIT_3469	COG0300	oxidoreductase activity
BACIT_3469	COG3321	synthase
BACIT_3469	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_3469	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_3470	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BACIT_3470	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_3470	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BACIT_3470	COG3321	synthase
BACIT_3470	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_3471	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_3471	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BACIT_3471	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_3471	COG3321	synthase
BACIT_3471	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BACIT_3472	COG2124	cytochrome p450
BACIT_3473	COG3425	synthase
BACIT_3474	COG1024	Enoyl-CoA hydratase
BACIT_3475	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BACIT_3476	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BACIT_3477	COG0300	oxidoreductase activity
BACIT_3478	COG3048	D-serine ammonia-lyase activity
BACIT_3480	COG0346	lactoylglutathione lyase activity
BACIT_3482	COG0628	permease
BACIT_3485	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BACIT_3486	COG0456	acetyltransferase
BACIT_3487	COG2329	Antibiotic biosynthesis monooxygenase
BACIT_3488	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BACIT_3488	COG0456	acetyltransferase
BACIT_3489	COG4918	Iron-sulphur cluster biosynthesis
BACIT_3491	COG1073	alpha beta
BACIT_3493	COG0667	Aldo Keto reductase
BACIT_3495	COG0494	nUDIX hydrolase
BACIT_3496	COG1379	DNA repair
BACIT_3497	COG1396	sequence-specific DNA binding
BACIT_3500	COG1027	Aspartate ammonia-lyase
BACIT_3501	COG1757	Na H antiporter
BACIT_3502	COG0281	malic enzyme
BACIT_3505	COG1300	Membrane
BACIT_3506	COG0735	belongs to the Fur family
BACIT_3508	COG4974	Belongs to the 'phage' integrase family
BACIT_3509	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
BACIT_3510	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BACIT_3511	COG1686	Belongs to the peptidase S11 family
BACIT_3512	COG1366	Belongs to the anti-sigma-factor antagonist family
BACIT_3514	COG1191	sigma factor activity
BACIT_3518	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BACIT_3521	COG0697	spore germination
BACIT_3522	COG0019	diaminopimelate decarboxylase activity
BACIT_3523	COG4086	secreted protein
BACIT_3524	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BACIT_3529	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BACIT_3529	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BACIT_3530	COG0307	riboflavin synthase, alpha
BACIT_3533	COG0456	acetyltransferase
BACIT_3534	COG1547	Domain of unknown function (DUF309)
BACIT_3538	COG1686	Belongs to the peptidase S11 family
BACIT_3539	COG2715	membrane protein required for spore maturation
BACIT_3540	COG0700	Nucleoside recognition
BACIT_3541	COG1187	pseudouridine synthase activity
BACIT_3542	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BACIT_3543	COG1333	cytochrome c biogenesis protein
BACIT_3544	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BACIT_3545	COG0745	RESPONSE REGULATOR receiver
BACIT_3548	COG1595	DNA-templated transcription, initiation
BACIT_3550	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BACIT_3551	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BACIT_3553	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BACIT_3554	COG1141	Ferredoxin
BACIT_3555	COG4955	Helix-turn-helix domain
BACIT_3556	COG0514	ATP-dependent DNA helicase (RecQ)
BACIT_3557	COG1266	CAAX protease self-immunity
BACIT_3558	COG1388	LysM domain
BACIT_3561	COG1408	metallophosphoesterase
BACIT_3562	COG4862	establishment of competence for transformation
BACIT_3563	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BACIT_3564	COG0492	ferredoxin-NADP+ reductase activity
BACIT_3565	COG2339	peptidase activity
BACIT_3566	COG3409	Peptidoglycan-binding domain 1 protein
BACIT_3566	COG3773	Cell wall hydrolase
BACIT_3567	COG2959	enzyme of heme biosynthesis
BACIT_3572	COG0539	negative regulation of cytoplasmic translation
BACIT_3582	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BACIT_3584	COG0776	regulation of translation
BACIT_3587	COG0142	geranyltranstransferase activity
BACIT_3589	COG0142	geranyltranstransferase activity
BACIT_3590	COG0105	UTP biosynthetic process
BACIT_3591	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BACIT_3594	COG4401	Chorismate mutase type I
BACIT_3595	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BACIT_3602	COG0287	Prephenate dehydrogenase
BACIT_3605	COG0457	Tetratricopeptide repeat
BACIT_3608	COG0723	plastoquinol--plastocyanin reductase activity
BACIT_3609	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BACIT_3610	COG2010	Cytochrome c
BACIT_3610	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BACIT_3611	COG4347	Protein of unknown function (DUF1405)
BACIT_3614	COG2140	Oxalate decarboxylase
BACIT_3615	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BACIT_3616	COG1694	Mazg nucleotide pyrophosphohydrolase
BACIT_3619	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BACIT_3620	COG0438	transferase activity, transferring glycosyl groups
BACIT_3626	COG1199	ATP-dependent helicase activity
BACIT_3626	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BACIT_3628	COG5353	protein conserved in bacteria
BACIT_3629	COG0436	Aminotransferase
BACIT_3631	COG3935	DnaD domain protein
BACIT_3632	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BACIT_3643	COG0071	Belongs to the small heat shock protein (HSP20) family
BACIT_3644	COG2190	(PTS) system
BACIT_3645	COG1111	helicase
BACIT_3645	COG1205	dead DEAH box helicase
BACIT_3646	COG3359	exonuclease
BACIT_3649	COG0116	Belongs to the methyltransferase superfamily
BACIT_3652	COG1199	ATP-dependent helicase activity
BACIT_3653	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BACIT_3655	COG2233	PERMEase
BACIT_3664	COG3424	synthase
BACIT_3665	COG1755	Isoprenylcysteine carboxyl methyltransferase
BACIT_3667	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BACIT_3670	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BACIT_3672	COG0328	RNA-DNA hybrid ribonuclease activity
BACIT_3673	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BACIT_3674	COG0328	RNA-DNA hybrid ribonuclease activity
BACIT_3678	COG1278	Cold shock
BACIT_3679	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BACIT_3682	COG0386	Belongs to the glutathione peroxidase family
BACIT_3683	COG1418	mRNA catabolic process
BACIT_3684	COG1413	lyase activity
BACIT_3687	COG2136	Putative SAM-dependent methyltransferase
BACIT_3687	COG2521	methyltransferase
BACIT_3692	COG0204	Acyl-transferase
BACIT_3693	COG1272	protein, Hemolysin III
BACIT_3701	COG2755	lipolytic protein G-D-S-L family
BACIT_3702	COG4698	Protein conserved in bacteria
BACIT_3703	COG1846	Transcriptional regulator
BACIT_3708	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BACIT_3709	COG5444	nuclease activity
BACIT_3712	COG4585	Histidine kinase
BACIT_3715	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BACIT_3715	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BACIT_3716	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BACIT_3717	COG0457	Tetratricopeptide repeat
BACIT_3718	COG0457	Tetratricopeptide repeat
BACIT_3722	COG1086	Polysaccharide biosynthesis protein
BACIT_3724	COG4641	Protein conserved in bacteria
BACIT_3727	COG0463	Glycosyl transferase, family 2
BACIT_3728	COG0456	acetyltransferase
BACIT_3732	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BACIT_3733	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BACIT_3734	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BACIT_3739	COG1509	lysine 2,3-aminomutase activity
BACIT_3746	COG0671	phosphoesterase, PA-phosphatase related
BACIT_3751	COG1876	peptidase activity
BACIT_3753	COG2226	methyltransferase
BACIT_3754	COG0793	Belongs to the peptidase S41A family
BACIT_3754	COG3409	Peptidoglycan-binding domain 1 protein
BACIT_3757	COG2723	6-phospho-beta-galactosidase activity
BACIT_3759	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BACIT_3761	COG0346	lactoylglutathione lyase activity
BACIT_3762	COG0400	carboxylic ester hydrolase activity
BACIT_3763	COG0778	Nitroreductase
BACIT_3764	COG1733	regulation of RNA biosynthetic process
BACIT_3766	COG1942	4-Oxalocrotonate Tautomerase
BACIT_3769	COG2962	Rard protein
BACIT_3771	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BACIT_3772	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BACIT_3773	COG1366	Belongs to the anti-sigma-factor antagonist family
BACIT_3777	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BACIT_3778	COG1819	glycosyl
BACIT_3780	COG0791	NLP P60 protein
BACIT_3780	COG1388	LysM domain
BACIT_3781	COG2032	superoxide dismutase activity
BACIT_3782	COG0714	Associated with various cellular activities
BACIT_3787	COG0508	dehydrogenase complex catalyzes the overall conversion of
BACIT_3788	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BACIT_3789	COG0385	Bile acid
BACIT_3793	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BACIT_3794	COG1657	PFAM Prenyltransferase squalene oxidase
BACIT_3795	COG1012	belongs to the aldehyde dehydrogenase family
BACIT_3801	COG0071	Belongs to the small heat shock protein (HSP20) family
BACIT_3804	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BACIT_3805	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BACIT_3809	COG3584	3D domain protein
BACIT_3809	COG1388	LysM domain
BACIT_3811	COG1619	proteins homologs of microcin C7 resistance protein MccF
BACIT_3815	COG2322	membrane
BACIT_3816	COG0741	lytic transglycosylase activity
BACIT_3818	COG0640	Transcriptional regulator
BACIT_3820	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BACIT_3821	COG1309	transcriptional regulator
BACIT_3822	COG0662	Cupin 2, conserved barrel domain protein
BACIT_3822	COG2207	Transcriptional regulator
BACIT_3823	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BACIT_3824	COG5444	nuclease activity
BACIT_3828	COG0243	molybdopterin cofactor binding
BACIT_3829	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BACIT_3830	COG1070	Carbohydrate kinase
BACIT_3831	COG2814	Major facilitator Superfamily
BACIT_3833	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BACIT_3834	COG0300	oxidoreductase activity
BACIT_3840	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BACIT_3841	COG0583	DNA-binding transcription factor activity
BACIT_3842	COG0067	glutamate synthase
BACIT_3842	COG0070	glutamate synthase
BACIT_3842	COG0069	glutamate synthase activity
BACIT_3843	COG0493	'glutamate synthase
BACIT_3845	COG0604	alcohol dehydrogenase
BACIT_3849	COG0640	Transcriptional regulator
BACIT_3850	COG2814	Major facilitator Superfamily
BACIT_3851	COG0405	Gamma-glutamyltransferase
BACIT_3852	COG0166	Belongs to the GPI family
BACIT_3853	COG0582	viral genome integration into host DNA
BACIT_3855	COG0534	Mate efflux family protein
BACIT_3856	COG2017	converts alpha-aldose to the beta-anomer
BACIT_3857	COG2027	D-alanyl-D-alanine carboxypeptidase
BACIT_3861	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_3864	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_3867	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_3867	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
BACIT_3869	COG1649	PFAM Uncharacterised BCR, COG1649
BACIT_3870	COG1960	acyl-CoA dehydrogenase activity
BACIT_3871	COG0318	PFAM AMP-dependent synthetase and ligase
BACIT_3872	COG0439	Biotin carboxylase
BACIT_3873	COG0511	ligase activity, forming carbon-carbon bonds
BACIT_3874	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BACIT_3875	COG1024	Enoyl-CoA hydratase
BACIT_3876	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BACIT_3877	COG0586	Pfam SNARE associated Golgi protein
BACIT_3878	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BACIT_3879	COG2246	polysaccharide biosynthetic process
BACIT_3881	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BACIT_3884	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BACIT_3885	COG2124	cytochrome p450
BACIT_3886	COG2610	gluconate transmembrane transporter activity
BACIT_3887	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BACIT_3888	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BACIT_3889	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_3896	COG3507	Belongs to the glycosyl hydrolase 43 family
BACIT_3898	COG0745	RESPONSE REGULATOR receiver
BACIT_3899	COG2205	protein histidine kinase activity
BACIT_3910	COG2271	Major facilitator Superfamily
BACIT_3911	COG1609	Transcriptional regulator
BACIT_3912	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_3913	COG1312	Catalyzes the dehydration of D-mannonate
BACIT_3914	COG0800	Aldolase
BACIT_3915	COG1063	alcohol dehydrogenase
BACIT_3917	COG1115	amino acid carrier protein
BACIT_3920	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BACIT_3921	COG0187	DNA topoisomerase II activity
BACIT_3923	COG1832	CoA-binding protein
BACIT_3925	COG4841	protein insertion into membrane
BACIT_3927	COG0824	Thioesterase
BACIT_3931	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BACIT_3932	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BACIT_3936	COG0071	Belongs to the small heat shock protein (HSP20) family
BACIT_3938	COG4846	Membrane protein involved in cytochrome C biogenesis
BACIT_3939	COG2201	protein-glutamate methylesterase activity
BACIT_3940	COG0785	Cytochrome C biogenesis protein
BACIT_3942	COG3763	UPF0154 protein
BACIT_3944	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BACIT_3946	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BACIT_3953	COG4195	phage-related replication protein
BACIT_3955	COG0756	dUTP diphosphatase activity
BACIT_3956	COG5434	Belongs to the glycosyl hydrolase 28 family
BACIT_3962	COG3397	chitin binding
BACIT_3970	COG0456	acetyltransferase
BACIT_3972	COG1064	alcohol dehydrogenase
BACIT_3973	COG2318	DinB family
BACIT_3979	COG1070	Carbohydrate kinase
BACIT_3982	COG3507	Belongs to the glycosyl hydrolase 43 family
BACIT_3983	COG2211	Major facilitator Superfamily
BACIT_3987	COG0174	glutamine synthetase
BACIT_3988	COG0789	Transcriptional regulator
BACIT_3989	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
BACIT_3990	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BACIT_3991	COG0464	growth
BACIT_3993	COG0860	N-Acetylmuramoyl-L-alanine amidase
BACIT_3994	COG4112	unkown
BACIT_3995	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BACIT_3996	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BACIT_4004	COG2076	Multidrug Resistance protein
BACIT_4006	COG1764	response to oxidative stress
BACIT_4007	COG4195	phage-related replication protein
BACIT_4010	COG1404	Belongs to the peptidase S8 family
BACIT_4012	COG3619	membrane
BACIT_4013	COG3209	COG3209 Rhs family protein
BACIT_4015	COG2124	cytochrome p450
BACIT_4016	COG3321	synthase
BACIT_4016	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BACIT_4016	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BACIT_4016	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
BACIT_4017	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_4017	COG3321	synthase
BACIT_4017	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_4017	COG4221	oxidoreductase activity
BACIT_4018	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_4018	COG3321	synthase
BACIT_4018	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BACIT_4018	COG3321	synthase
BACIT_4018	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_4018	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BACIT_4018	COG1028	Short-chain dehydrogenase reductase Sdr
BACIT_4018	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BACIT_4018	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BACIT_4018	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BACIT_4024	COG1024	Enoyl-CoA hydratase
BACIT_4025	COG1024	Enoyl-CoA hydratase
BACIT_4026	COG3425	synthase
BACIT_4027	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BACIT_4037	COG4550	Control of competence regulator ComK, YlbF/YmcA
BACIT_4043	COG2359	stage V sporulation protein S
BACIT_4044	COG1692	metallophosphoesterase
BACIT_4046	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BACIT_4050	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BACIT_4051	COG1426	Protein conserved in bacteria
BACIT_4054	COG0300	oxidoreductase activity
BACIT_4055	COG0612	Peptidase, M16
BACIT_4056	COG0612	Peptidase, M16