BAMY_00005 SM00382 ATPases associated with a variety of cellular activities BAMY_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain BAMY_00010 SM00480 DNA polymerase III beta subunit BAMY_00030 SM00387 Histidine kinase-like ATPases BAMY_00030 SM00433 TopoisomeraseII BAMY_00035 SM00434 DNA Topoisomerase IV BAMY_00070 SM00116 Domain in cystathionine beta-synthase and other proteins. BAMY_00070 SM01240 BAMY_00070 BAMY_00075 SM00936 Penicillin-binding protein 5, C-terminal domain BAMY_00115 SM00257 Lysin motif BAMY_00115 SM00636 BAMY_00115 BAMY_00135 SM00382 ATPases associated with a variety of cellular activities BAMY_00145 SM00493 BAMY_00145 BAMY_00240 SM00465 GIY-YIG type nucleases (URI domain) BAMY_00250 SM00966 SpoVT / AbrB like domain BAMY_00265 SM01208 BAMY_00265 BAMY_00270 SM00493 BAMY_00270 BAMY_00275 SM00650 Ribosomal RNA adenine dimethylases BAMY_00320 SM01400 BAMY_00320 BAMY_00340 SM00487 DEAD-like helicases superfamily BAMY_00340 SM00490 helicase superfamily c-terminal domain BAMY_00340 SM00982 BAMY_00340 BAMY_00340 SM01058 CarD-like/TRCF domain BAMY_00345 SM00966 SpoVT / AbrB like domain BAMY_00360 SM00363 S4 RNA-binding domain BAMY_00380 SM00316 Ribosomal protein S1-like RNA-binding domain BAMY_00395 SM00331 Sigma factor PP2C-like phosphatases BAMY_00395 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BAMY_00405 SM00220 Serine/Threonine protein kinases, catalytic domain BAMY_00410 SM00977 TilS substrate C-terminal domain BAMY_00420 SM00382 ATPases associated with a variety of cellular activities BAMY_00465 SM00905 Dihydroneopterin aldolase BAMY_00475 SM00530 Helix-turn-helix XRE-family like proteins BAMY_00585 SM00382 ATPases associated with a variety of cellular activities BAMY_00585 SM01086 C-terminal, D2-small domain, of ClpB protein BAMY_00590 SM00382 ATPases associated with a variety of cellular activities BAMY_00600 SM00670 Large family of predicted nucleotide-binding domains BAMY_00625 SM00840 BAMY_00625 BAMY_00630 SM00535 Ribonuclease III family BAMY_00635 SM00967 RNA 2'-O ribose methyltransferase substrate binding BAMY_00660 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BAMY_00660 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BAMY_00665 SM00649 Ribosomal protein L11/L12 BAMY_00695 SM00663 RNA polymerase I subunit A N-terminus BAMY_00715 SM00838 Elongation factor G C-terminus BAMY_00715 SM00889 Elongation factor G, domain IV BAMY_00730 SM01403 BAMY_00730 BAMY_00750 SM01382 BAMY_00750 BAMY_00750 SM01383 BAMY_00750 BAMY_00765 SM00322 K homology RNA-binding domain BAMY_00785 SM01374 BAMY_00785 BAMY_00790 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BAMY_00845 SM00316 Ribosomal protein S1-like RNA-binding domain BAMY_00865 SM00662 RNA polymerases D BAMY_00875 SM00382 ATPases associated with a variety of cellular activities BAMY_00880 SM00382 ATPases associated with a variety of cellular activities BAMY_00920 SM00646 BAMY_00920 BAMY_00935 SM01251 BAMY_00935 BAMY_01015 SM00829 Enoylreductase BAMY_01050 SM00342 helix_turn_helix, arabinose operon control protein BAMY_01145 SM00382 ATPases associated with a variety of cellular activities BAMY_01180 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_01200 SM00421 helix_turn_helix, Lux Regulon BAMY_01200 SM00448 cheY-homologous receiver domain BAMY_01205 SM00382 ATPases associated with a variety of cellular activities BAMY_01285 SM00530 Helix-turn-helix XRE-family like proteins BAMY_01325 SM00450 Rhodanese Homology Domain BAMY_01360 SM00387 Histidine kinase-like ATPases BAMY_01365 SM00448 cheY-homologous receiver domain BAMY_01450 SM00870 BAMY_01450 BAMY_01490 SM00028 Tetratricopeptide repeats BAMY_01500 SM00642 Alpha-amylase domain BAMY_01510 SM00382 ATPases associated with a variety of cellular activities BAMY_01560 SM00116 Domain in cystathionine beta-synthase and other proteins. BAMY_01560 SM00382 ATPases associated with a variety of cellular activities BAMY_01590 SM00632 BAMY_01590 BAMY_01590 SM00642 Alpha-amylase domain BAMY_01605 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_01710 SM00833 Cobalamin synthesis protein cobW C-terminal domain BAMY_01750 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BAMY_01760 SM00823 Phosphopantetheine attachment site BAMY_01765 SM00823 Phosphopantetheine attachment site BAMY_01770 SM00823 Phosphopantetheine attachment site BAMY_01795 SM00382 ATPases associated with a variety of cellular activities BAMY_01805 SM00062 Bacterial periplasmic substrate-binding proteins BAMY_01840 SM00710 Parallel beta-helix repeats BAMY_01840 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BAMY_01875 SM00062 Bacterial periplasmic substrate-binding proteins BAMY_01885 SM00382 ATPases associated with a variety of cellular activities BAMY_01900 SM00382 ATPases associated with a variety of cellular activities BAMY_01910 SM00448 cheY-homologous receiver domain BAMY_01910 SM00862 Transcriptional regulatory protein, C terminal BAMY_01915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAMY_01915 SM00387 Histidine kinase-like ATPases BAMY_01915 SM00388 His Kinase A (phosphoacceptor) domain BAMY_01920 SM00028 Tetratricopeptide repeats BAMY_01945 SM00382 ATPases associated with a variety of cellular activities BAMY_01975 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAMY_01980 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_02015 SM00420 helix_turn_helix, Deoxyribose operon repressor BAMY_02065 SM00796 Allophanate hydrolase subunit 1 BAMY_02070 SM00797 Allophanate hydrolase subunit 2 BAMY_02075 SM00346 helix_turn_helix isocitrate lyase regulation BAMY_02145 SM00344 helix_turn_helix ASNC type BAMY_02150 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BAMY_02150 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BAMY_02150 SM00493 BAMY_02150 BAMY_02160 SM00267 diguanylate cyclase BAMY_02230 SM00028 Tetratricopeptide repeats BAMY_02315 SM00091 PAS domain BAMY_02315 SM00387 Histidine kinase-like ATPases BAMY_02320 SM00448 cheY-homologous receiver domain BAMY_02335 SM00382 ATPases associated with a variety of cellular activities BAMY_02385 SM00487 DEAD-like helicases superfamily BAMY_02385 SM00490 helicase superfamily c-terminal domain BAMY_02415 SM01005 Alanine racemase, C-terminal domain BAMY_02440 SM00387 Histidine kinase-like ATPases BAMY_02445 SM00331 Sigma factor PP2C-like phosphatases BAMY_02465 SM00331 Sigma factor PP2C-like phosphatases BAMY_02465 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BAMY_02470 SM00316 Ribosomal protein S1-like RNA-binding domain BAMY_02470 SM00732 Likely ribonuclease with RNase H fold. BAMY_02475 SM00731 SprT homologues. BAMY_02540 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_02555 SM00357 Cold shock protein domain BAMY_02575 SM00450 Rhodanese Homology Domain BAMY_02580 SM00450 Rhodanese Homology Domain BAMY_02580 SM00849 Metallo-beta-lactamase superfamily BAMY_02625 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_02625 SM00895 BAMY_02625 BAMY_02645 SM00342 helix_turn_helix, arabinose operon control protein BAMY_02655 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_02710 SM01130 BAMY_02710 BAMY_02735 SM00829 Enoylreductase BAMY_02740 SM00422 helix_turn_helix, mercury resistance BAMY_02750 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_02805 SM00387 Histidine kinase-like ATPases BAMY_02810 SM00421 helix_turn_helix, Lux Regulon BAMY_02810 SM00448 cheY-homologous receiver domain BAMY_02825 SM00382 ATPases associated with a variety of cellular activities BAMY_02850 SM00825 Beta-ketoacyl synthase BAMY_02855 SM00530 Helix-turn-helix XRE-family like proteins BAMY_02870 SM00422 helix_turn_helix, mercury resistance BAMY_02890 SM01329 BAMY_02890 BAMY_02895 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_02895 SM00895 BAMY_02895 BAMY_02930 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_02930 SM00866 BAMY_02930 BAMY_02935 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_02935 SM00895 BAMY_02935 BAMY_02975 SM00829 Enoylreductase BAMY_03045 SM00382 ATPases associated with a variety of cellular activities BAMY_03055 SM00881 CoA binding domain BAMY_03080 SM00883 Chaperonin 10 Kd subunit BAMY_03100 SM00028 Tetratricopeptide repeats BAMY_03100 SM00382 ATPases associated with a variety of cellular activities BAMY_03105 SM00829 Enoylreductase BAMY_03160 SM00829 Enoylreductase BAMY_03200 SM00460 Transglutaminase/protease-like homologues BAMY_03245 SM01001 AIR carboxylase BAMY_03255 SM00998 Adenylosuccinate lyase C-terminus BAMY_03270 SM01211 BAMY_03270 BAMY_03295 SM00798 AICARFT/IMPCHase bienzyme BAMY_03295 SM00851 MGS-like domain BAMY_03300 SM01209 BAMY_03300 BAMY_03300 SM01210 BAMY_03300 BAMY_03345 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BAMY_03345 SM00292 breast cancer carboxy-terminal domain BAMY_03345 SM00532 Ligase N family BAMY_03380 SM00845 GatB domain BAMY_03395 SM00046 Diacylglycerol kinase catalytic domain (presumed) BAMY_03405 SM00421 helix_turn_helix, Lux Regulon BAMY_03405 SM00448 cheY-homologous receiver domain BAMY_03425 SM00825 Beta-ketoacyl synthase BAMY_03440 SM00382 ATPases associated with a variety of cellular activities BAMY_03540 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_03570 SM00382 ATPases associated with a variety of cellular activities BAMY_03665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAMY_03680 SM00382 ATPases associated with a variety of cellular activities BAMY_03685 SM00422 helix_turn_helix, mercury resistance BAMY_03695 SM00382 ATPases associated with a variety of cellular activities BAMY_03700 SM00487 DEAD-like helicases superfamily BAMY_03700 SM00490 helicase superfamily c-terminal domain BAMY_03710 SM00829 Enoylreductase BAMY_03725 SM00656 BAMY_03725 BAMY_03745 SM00091 PAS domain BAMY_03745 SM00387 Histidine kinase-like ATPases BAMY_03750 SM00448 cheY-homologous receiver domain BAMY_03765 SM00849 Metallo-beta-lactamase superfamily BAMY_03840 SM00642 Alpha-amylase domain BAMY_03845 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_03845 SM00866 BAMY_03845 BAMY_03875 SM00354 helix_turn _helix lactose operon repressor BAMY_03900 SM00226 Low molecular weight phosphatase family BAMY_03965 SM00478 endonuclease III BAMY_03995 SM00861 Transketolase, pyrimidine binding domain BAMY_04010 SM00382 ATPases associated with a variety of cellular activities BAMY_04035 SM00382 ATPases associated with a variety of cellular activities BAMY_04040 SM00382 ATPases associated with a variety of cellular activities BAMY_04095 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_04165 SM00287 Bacterial SH3 domain homologues BAMY_04195 SM00478 endonuclease III BAMY_04195 SM00525 BAMY_04195 BAMY_04225 SM00382 ATPases associated with a variety of cellular activities BAMY_04395 SM00382 ATPases associated with a variety of cellular activities BAMY_04400 SM00382 ATPases associated with a variety of cellular activities BAMY_04405 SM01060 BAMY_04405 BAMY_04415 SM00382 ATPases associated with a variety of cellular activities BAMY_04420 SM00062 Bacterial periplasmic substrate-binding proteins BAMY_04445 SM00530 Helix-turn-helix XRE-family like proteins BAMY_04460 SM00567 E-Z type HEAT repeats BAMY_04490 SM00763 PrkA AAA domain BAMY_04500 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_04530 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_04535 SM00382 ATPases associated with a variety of cellular activities BAMY_04540 SM00382 ATPases associated with a variety of cellular activities BAMY_04550 SM00357 Cold shock protein domain BAMY_04560 SM00267 diguanylate cyclase BAMY_04600 SM00363 S4 RNA-binding domain BAMY_04610 SM00116 Domain in cystathionine beta-synthase and other proteins. BAMY_04680 SM00257 Lysin motif BAMY_04700 SM00098 Alkaline phosphatase homologues BAMY_04705 SM00257 Lysin motif BAMY_04750 SM00563 Phosphate acyltransferases BAMY_04755 SM01091 Transporter associated domain BAMY_04760 SM00422 helix_turn_helix, mercury resistance BAMY_04770 SM00825 Beta-ketoacyl synthase BAMY_04775 SM01091 Transporter associated domain BAMY_04830 SM00382 ATPases associated with a variety of cellular activities BAMY_04835 SM00382 ATPases associated with a variety of cellular activities BAMY_04885 SM00729 Elongator protein 3, MiaB family, Radical SAM BAMY_04920 SM00382 ATPases associated with a variety of cellular activities BAMY_04940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAMY_04975 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_05005 SM00382 ATPases associated with a variety of cellular activities BAMY_05090 SM00849 Metallo-beta-lactamase superfamily BAMY_05135 SM00855 Phosphoglycerate mutase family BAMY_05155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAMY_05170 SM00914 BAMY_05170 BAMY_05195 SM00894 Excalibur calcium-binding domain BAMY_05235 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_05360 SM00342 helix_turn_helix, arabinose operon control protein BAMY_05365 SM00354 helix_turn _helix lactose operon repressor BAMY_05400 SM00316 Ribosomal protein S1-like RNA-binding domain BAMY_05410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAMY_05410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAMY_05465 SM00859 Semialdehyde dehydrogenase, NAD binding domain BAMY_05485 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BAMY_05490 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BAMY_05545 SM00825 Beta-ketoacyl synthase BAMY_05555 SM00382 ATPases associated with a variety of cellular activities BAMY_05560 SM00382 ATPases associated with a variety of cellular activities BAMY_05605 SM00382 ATPases associated with a variety of cellular activities BAMY_05610 SM00382 ATPases associated with a variety of cellular activities BAMY_05665 SM01118 BAMY_05665 BAMY_05675 SM00954 Region found in RelA / SpoT proteins BAMY_05800 SM00849 Metallo-beta-lactamase superfamily BAMY_05810 SM00382 ATPases associated with a variety of cellular activities BAMY_05815 SM00966 SpoVT / AbrB like domain BAMY_05905 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_05945 SM00420 helix_turn_helix, Deoxyribose operon repressor BAMY_05945 SM01134 BAMY_05945 BAMY_05955 SM00612 BAMY_05955 BAMY_05985 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BAMY_05985 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BAMY_06020 SM00382 ATPases associated with a variety of cellular activities BAMY_06055 SM00354 helix_turn _helix lactose operon repressor BAMY_06065 SM00858 BAMY_06065 BAMY_06070 SM00448 cheY-homologous receiver domain BAMY_06070 SM00862 Transcriptional regulatory protein, C terminal BAMY_06075 SM00387 Histidine kinase-like ATPases BAMY_06075 SM00388 His Kinase A (phosphoacceptor) domain BAMY_06100 SM00028 Tetratricopeptide repeats BAMY_06105 SM00257 Lysin motif BAMY_06105 SM00644 BAMY_06105 BAMY_06125 SM00530 Helix-turn-helix XRE-family like proteins BAMY_06140 SM00382 ATPases associated with a variety of cellular activities BAMY_06230 SM00257 Lysin motif BAMY_06295 SM00257 Lysin motif BAMY_06295 SM00644 BAMY_06295 BAMY_06340 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BAMY_06365 SM00382 ATPases associated with a variety of cellular activities BAMY_06380 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BAMY_06390 SM00382 ATPases associated with a variety of cellular activities BAMY_06430 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BAMY_06445 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_06465 SM00028 Tetratricopeptide repeats BAMY_06480 SM00100 Cyclic nucleotide-monophosphate binding domain BAMY_06505 SM00382 ATPases associated with a variety of cellular activities BAMY_06515 SM00257 Lysin motif BAMY_06515 SM00636 BAMY_06515 BAMY_06520 SM00116 Domain in cystathionine beta-synthase and other proteins. BAMY_06520 SM00924 MgtE intracellular N domain BAMY_06525 SM00422 helix_turn_helix, mercury resistance BAMY_06535 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_06550 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BAMY_06610 SM00091 PAS domain BAMY_06610 SM00387 Histidine kinase-like ATPases BAMY_06610 SM00388 His Kinase A (phosphoacceptor) domain BAMY_06650 SM01007 Class II Aldolase and Adducin N-terminal domain BAMY_06665 SM00387 Histidine kinase-like ATPases BAMY_06665 SM00388 His Kinase A (phosphoacceptor) domain BAMY_06670 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_06685 SM00382 ATPases associated with a variety of cellular activities BAMY_06685 SM01086 C-terminal, D2-small domain, of ClpB protein BAMY_06760 SM00354 helix_turn _helix lactose operon repressor BAMY_06765 SM01061 CAT RNA binding domain BAMY_06795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAMY_06795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAMY_06815 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BAMY_06815 SM00091 PAS domain BAMY_06815 SM00387 Histidine kinase-like ATPases BAMY_06815 SM00388 His Kinase A (phosphoacceptor) domain BAMY_06825 SM00260 Two component signalling adaptor domain BAMY_06825 SM00448 cheY-homologous receiver domain BAMY_06840 SM00257 Lysin motif BAMY_06860 SM00052 Putative diguanylate phosphodiesterase BAMY_06950 SM00852 Probable molybdopterin binding domain BAMY_06980 SM00382 ATPases associated with a variety of cellular activities BAMY_06985 SM01066 Carbohydrate binding domain BAMY_06990 SM00420 helix_turn_helix, Deoxyribose operon repressor BAMY_06990 SM01134 BAMY_06990 BAMY_07015 SM00382 ATPases associated with a variety of cellular activities BAMY_07040 SM00966 SpoVT / AbrB like domain BAMY_07045 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BAMY_07045 SM00091 PAS domain BAMY_07045 SM00387 Histidine kinase-like ATPases BAMY_07045 SM00388 His Kinase A (phosphoacceptor) domain BAMY_07065 SM00849 Metallo-beta-lactamase superfamily BAMY_07095 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BAMY_07100 SM00822 BAMY_07100 BAMY_07100 SM00823 Phosphopantetheine attachment site BAMY_07100 SM00825 Beta-ketoacyl synthase BAMY_07100 SM00826 BAMY_07100 BAMY_07100 SM01294 BAMY_07100 BAMY_07105 SM00822 BAMY_07105 BAMY_07105 SM00823 Phosphopantetheine attachment site BAMY_07105 SM00825 Beta-ketoacyl synthase BAMY_07105 SM00826 BAMY_07105 BAMY_07110 SM00822 BAMY_07110 BAMY_07110 SM00823 Phosphopantetheine attachment site BAMY_07110 SM00825 Beta-ketoacyl synthase BAMY_07110 SM01294 BAMY_07110 BAMY_07115 SM00822 BAMY_07115 BAMY_07115 SM00823 Phosphopantetheine attachment site BAMY_07115 SM00825 Beta-ketoacyl synthase BAMY_07115 SM01294 BAMY_07115 BAMY_07120 SM00822 BAMY_07120 BAMY_07120 SM00823 Phosphopantetheine attachment site BAMY_07120 SM00825 Beta-ketoacyl synthase BAMY_07120 SM01294 BAMY_07120 BAMY_07125 SM00822 BAMY_07125 BAMY_07125 SM00823 Phosphopantetheine attachment site BAMY_07125 SM00825 Beta-ketoacyl synthase BAMY_07125 SM01294 BAMY_07125 BAMY_07130 SM00822 BAMY_07130 BAMY_07130 SM00823 Phosphopantetheine attachment site BAMY_07130 SM01294 BAMY_07130 BAMY_07145 SM00861 Transketolase, pyrimidine binding domain BAMY_07220 SM00838 Elongation factor G C-terminus BAMY_07240 SM00670 Large family of predicted nucleotide-binding domains BAMY_07265 SM00878 Biotin carboxylase C-terminal domain BAMY_07310 SM00116 Domain in cystathionine beta-synthase and other proteins. BAMY_07415 SM00740 BAMY_07415 BAMY_07420 SM00740 BAMY_07420 BAMY_07460 SM00842 Cell division protein FtsA BAMY_07465 SM00864 Tubulin/FtsZ family, GTPase domain BAMY_07465 SM00865 Tubulin/FtsZ family, C-terminal domain BAMY_07490 SM00382 ATPases associated with a variety of cellular activities BAMY_07525 SM00363 S4 RNA-binding domain BAMY_07555 SM00363 S4 RNA-binding domain BAMY_07580 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BAMY_07585 SM00851 MGS-like domain BAMY_07585 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BAMY_07600 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BAMY_07650 SM00831 Cation transporter/ATPase, N-terminus BAMY_07665 SM00072 Guanylate kinase homologues. BAMY_07670 SM01409 BAMY_07670 BAMY_07680 SM00487 DEAD-like helicases superfamily BAMY_07680 SM00490 helicase superfamily c-terminal domain BAMY_07705 SM00331 Sigma factor PP2C-like phosphatases BAMY_07705 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BAMY_07710 SM00220 Serine/Threonine protein kinases, catalytic domain BAMY_07710 SM00740 BAMY_07710 BAMY_07725 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BAMY_07745 SM01120 BAMY_07745 BAMY_07745 SM01121 BAMY_07745 BAMY_07760 SM00487 DEAD-like helicases superfamily BAMY_07760 SM00490 helicase superfamily c-terminal domain BAMY_07775 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BAMY_07780 SM00822 BAMY_07780 BAMY_07790 SM00358 Double-stranded RNA binding motif BAMY_07790 SM00535 Ribonuclease III family BAMY_07795 SM00968 SMC proteins Flexible Hinge Domain BAMY_07800 SM00382 ATPases associated with a variety of cellular activities BAMY_07800 SM00962 SRP54-type protein, GTPase domain BAMY_07800 SM00963 SRP54-type protein, helical bundle domain BAMY_07815 SM00382 ATPases associated with a variety of cellular activities BAMY_07815 SM00962 SRP54-type protein, GTPase domain BAMY_07815 SM00963 SRP54-type protein, helical bundle domain BAMY_07875 SM00881 CoA binding domain BAMY_07885 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BAMY_07885 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BAMY_07885 SM00493 BAMY_07885 BAMY_07905 SM00382 ATPases associated with a variety of cellular activities BAMY_07905 SM01086 C-terminal, D2-small domain, of ClpB protein BAMY_07945 SM00382 ATPases associated with a variety of cellular activities BAMY_07995 SM00448 cheY-homologous receiver domain BAMY_08030 SM00962 SRP54-type protein, GTPase domain BAMY_08040 SM00448 cheY-homologous receiver domain BAMY_08045 SM00073 Histidine Phosphotransfer domain BAMY_08045 SM00260 Two component signalling adaptor domain BAMY_08045 SM00387 Histidine kinase-like ATPases BAMY_08045 SM01231 BAMY_08045 BAMY_08050 SM00260 Two component signalling adaptor domain BAMY_08110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BAMY_08120 SM00479 BAMY_08120 BAMY_08120 SM00481 DNA polymerase alpha chain like domain BAMY_08130 SM00316 Ribosomal protein S1-like RNA-binding domain BAMY_08130 SM00322 K homology RNA-binding domain BAMY_08165 SM00904 Riboflavin kinase BAMY_08170 SM01387 BAMY_08170 BAMY_08175 SM00316 Ribosomal protein S1-like RNA-binding domain BAMY_08175 SM00322 K homology RNA-binding domain BAMY_08205 SM00859 Semialdehyde dehydrogenase, NAD binding domain BAMY_08215 SM01130 BAMY_08215 BAMY_08220 SM00849 Metallo-beta-lactamase superfamily BAMY_08235 SM00382 ATPases associated with a variety of cellular activities BAMY_08235 SM00843 BAMY_08235 BAMY_08240 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_08240 SM00866 BAMY_08240 BAMY_08250 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_08285 SM00530 Helix-turn-helix XRE-family like proteins BAMY_08295 SM00852 Probable molybdopterin binding domain BAMY_08300 SM00382 ATPases associated with a variety of cellular activities BAMY_08310 SM00322 K homology RNA-binding domain BAMY_08310 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAMY_08325 SM00829 Enoylreductase BAMY_08335 SM00729 Elongator protein 3, MiaB family, Radical SAM BAMY_08350 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BAMY_08350 SM00534 ATPase domain of DNA mismatch repair MUTS family BAMY_08355 SM00853 MutL C terminal dimerisation domain BAMY_08355 SM01340 BAMY_08355 BAMY_08365 SM00849 Metallo-beta-lactamase superfamily BAMY_08370 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BAMY_08375 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BAMY_08380 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BAMY_08405 SM00822 BAMY_08405 BAMY_08405 SM00823 Phosphopantetheine attachment site BAMY_08405 SM00825 Beta-ketoacyl synthase BAMY_08405 SM00826 BAMY_08405 BAMY_08405 SM01294 BAMY_08405 BAMY_08410 SM00822 BAMY_08410 BAMY_08410 SM00823 Phosphopantetheine attachment site BAMY_08410 SM00825 Beta-ketoacyl synthase BAMY_08410 SM00826 BAMY_08410 BAMY_08410 SM01294 BAMY_08410 BAMY_08415 SM00822 BAMY_08415 BAMY_08415 SM00823 Phosphopantetheine attachment site BAMY_08415 SM00825 Beta-ketoacyl synthase BAMY_08415 SM00826 BAMY_08415 BAMY_08415 SM01294 BAMY_08415 BAMY_08420 SM00822 BAMY_08420 BAMY_08420 SM00823 Phosphopantetheine attachment site BAMY_08420 SM00825 Beta-ketoacyl synthase BAMY_08420 SM00826 BAMY_08420 BAMY_08420 SM01294 BAMY_08420 BAMY_08425 SM00823 Phosphopantetheine attachment site BAMY_08425 SM00825 Beta-ketoacyl synthase BAMY_08425 SM01294 BAMY_08425 BAMY_08530 SM00646 BAMY_08530 BAMY_08540 SM00382 ATPases associated with a variety of cellular activities BAMY_08555 SM00422 helix_turn_helix, mercury resistance BAMY_08560 SM01230 BAMY_08560 BAMY_08655 SM00829 Enoylreductase BAMY_08720 SM00710 Parallel beta-helix repeats BAMY_08760 SM00257 Lysin motif BAMY_08765 SM00857 Resolvase, N terminal domain BAMY_08775 SM00861 Transketolase, pyrimidine binding domain BAMY_08800 SM00448 cheY-homologous receiver domain BAMY_08870 SM01207 BAMY_08870 BAMY_08875 SM00881 CoA binding domain BAMY_08880 SM00387 Histidine kinase-like ATPases BAMY_08880 SM00433 TopoisomeraseII BAMY_08885 SM00434 DNA Topoisomerase IV BAMY_08905 SM00829 Enoylreductase BAMY_08925 SM00354 helix_turn _helix lactose operon repressor BAMY_08970 SM01067 Cellulose binding domain BAMY_08980 SM00387 Histidine kinase-like ATPases BAMY_08980 SM00388 His Kinase A (phosphoacceptor) domain BAMY_08985 SM00448 cheY-homologous receiver domain BAMY_08985 SM00862 Transcriptional regulatory protein, C terminal BAMY_08995 SM00606 Cellulose Binding Domain Type IV BAMY_09000 SM00823 Phosphopantetheine attachment site BAMY_09000 SM00824 Thioesterase BAMY_09005 SM00823 Phosphopantetheine attachment site BAMY_09010 SM00823 Phosphopantetheine attachment site BAMY_09010 SM00825 Beta-ketoacyl synthase BAMY_09015 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BAMY_09020 SM00822 BAMY_09020 BAMY_09025 SM00882 Coenzyme A transferase BAMY_09030 SM00882 Coenzyme A transferase BAMY_09045 SM00729 Elongator protein 3, MiaB family, Radical SAM BAMY_09045 SM00876 Biotin and Thiamin Synthesis associated domain BAMY_09105 SM00878 Biotin carboxylase C-terminal domain BAMY_09130 SM00824 Thioesterase BAMY_09135 SM00823 Phosphopantetheine attachment site BAMY_09140 SM00823 Phosphopantetheine attachment site BAMY_09145 SM00823 Phosphopantetheine attachment site BAMY_09145 SM01294 BAMY_09145 BAMY_09150 SM00823 Phosphopantetheine attachment site BAMY_09200 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAMY_09210 SM00829 Enoylreductase BAMY_09230 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BAMY_09245 SM00822 BAMY_09245 BAMY_09275 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BAMY_09290 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_09300 SM00822 BAMY_09300 BAMY_09315 SM00342 helix_turn_helix, arabinose operon control protein BAMY_09325 SM00849 Metallo-beta-lactamase superfamily BAMY_09335 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAMY_09370 SM00257 Lysin motif BAMY_09375 SM00341 Helicase and RNase D C-terminal BAMY_09375 SM00487 DEAD-like helicases superfamily BAMY_09375 SM00490 helicase superfamily c-terminal domain BAMY_09375 SM00956 BAMY_09375 BAMY_09455 SM00849 Metallo-beta-lactamase superfamily BAMY_09465 SM00861 Transketolase, pyrimidine binding domain BAMY_09470 SM00327 von Willebrand factor (vWF) type A domain BAMY_09475 SM00382 ATPases associated with a variety of cellular activities BAMY_09485 SM00257 Lysin motif BAMY_09530 SM00644 BAMY_09530 BAMY_09555 SM00710 Parallel beta-helix repeats BAMY_09560 SM00047 Lysozyme subfamily 2 BAMY_09650 SM00507 HNH nucleases BAMY_09690 SM00382 ATPases associated with a variety of cellular activities BAMY_09740 SM00530 Helix-turn-helix XRE-family like proteins BAMY_09840 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_09840 SM00866 BAMY_09840 BAMY_09845 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BAMY_09845 SM00245 tail specific protease BAMY_09875 SM00014 Acid phosphatase homologues BAMY_09925 SM00882 Coenzyme A transferase BAMY_09930 SM00882 Coenzyme A transferase BAMY_09940 SM00871 Bacterial transcription activator, effector binding domain BAMY_10065 SM00860 SMI1 / KNR4 family BAMY_10070 SM00860 SMI1 / KNR4 family BAMY_10080 SM00860 SMI1 / KNR4 family BAMY_10085 SM00318 Staphylococcal nuclease homologues BAMY_10085 SM00894 Excalibur calcium-binding domain BAMY_10105 SM00857 Resolvase, N terminal domain BAMY_10125 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_10200 SM00567 E-Z type HEAT repeats BAMY_10200 SM00932 Scaffold protein Nfu/NifU N terminal BAMY_10205 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAMY_10225 SM00357 Cold shock protein domain BAMY_10265 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BAMY_10265 SM00475 5'-3' exonuclease BAMY_10350 SM00644 BAMY_10350 BAMY_10375 SM00710 Parallel beta-helix repeats BAMY_10380 SM00047 Lysozyme subfamily 2 BAMY_10455 SM00507 HNH nucleases BAMY_10510 SM00382 ATPases associated with a variety of cellular activities BAMY_10555 SM01040 BRO family, N-terminal domain BAMY_10565 SM00530 Helix-turn-helix XRE-family like proteins BAMY_10570 SM00530 Helix-turn-helix XRE-family like proteins BAMY_10595 SM00491 BAMY_10595 BAMY_10605 SM00981 BAMY_10605 BAMY_10630 SM00487 DEAD-like helicases superfamily BAMY_10630 SM00490 helicase superfamily c-terminal domain BAMY_10680 SM00060 Fibronectin type 3 domain BAMY_10690 SM00478 endonuclease III BAMY_10690 SM00525 BAMY_10690 BAMY_10720 SM00479 BAMY_10720 BAMY_10720 SM00487 DEAD-like helicases superfamily BAMY_10720 SM00491 BAMY_10720 BAMY_10760 SM00851 MGS-like domain BAMY_10780 SM00835 Cupin BAMY_10815 SM00914 BAMY_10815 BAMY_10820 SM00028 Tetratricopeptide repeats BAMY_10885 SM00138 Methyltransferase, chemotaxis proteins BAMY_10890 SM00562 BAMY_10890 BAMY_10920 SM00411 bacterial (prokaryotic) histone like domain BAMY_10965 SM00316 Ribosomal protein S1-like RNA-binding domain BAMY_11000 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BAMY_11020 SM00257 Lysin motif BAMY_11030 SM00487 DEAD-like helicases superfamily BAMY_11030 SM00490 helicase superfamily c-terminal domain BAMY_11065 SM00091 PAS domain BAMY_11065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAMY_11065 SM00387 Histidine kinase-like ATPases BAMY_11065 SM00388 His Kinase A (phosphoacceptor) domain BAMY_11070 SM00448 cheY-homologous receiver domain BAMY_11070 SM00862 Transcriptional regulatory protein, C terminal BAMY_11090 SM00363 S4 RNA-binding domain BAMY_11225 SM00387 Histidine kinase-like ATPases BAMY_11235 SM00936 Penicillin-binding protein 5, C-terminal domain BAMY_11280 SM00919 Malic enzyme, NAD binding domain BAMY_11280 SM01274 BAMY_11280 BAMY_11295 SM00870 BAMY_11295 BAMY_11300 SM00530 Helix-turn-helix XRE-family like proteins BAMY_11400 SM00849 Metallo-beta-lactamase superfamily BAMY_11425 SM00823 Phosphopantetheine attachment site BAMY_11425 SM00825 Beta-ketoacyl synthase BAMY_11425 SM00829 Enoylreductase BAMY_11425 SM01294 BAMY_11425 BAMY_11430 SM00822 BAMY_11430 BAMY_11430 SM00823 Phosphopantetheine attachment site BAMY_11430 SM00825 Beta-ketoacyl synthase BAMY_11430 SM00826 BAMY_11430 BAMY_11435 SM00822 BAMY_11435 BAMY_11435 SM00823 Phosphopantetheine attachment site BAMY_11435 SM00825 Beta-ketoacyl synthase BAMY_11435 SM01294 BAMY_11435 BAMY_11440 SM00822 BAMY_11440 BAMY_11440 SM00823 Phosphopantetheine attachment site BAMY_11440 SM00825 Beta-ketoacyl synthase BAMY_11440 SM00826 BAMY_11440 BAMY_11440 SM01294 BAMY_11440 BAMY_11445 SM00822 BAMY_11445 BAMY_11445 SM00823 Phosphopantetheine attachment site BAMY_11445 SM00825 Beta-ketoacyl synthase BAMY_11445 SM00826 BAMY_11445 BAMY_11445 SM01294 BAMY_11445 BAMY_11450 SM00822 BAMY_11450 BAMY_11450 SM00823 Phosphopantetheine attachment site BAMY_11450 SM00825 Beta-ketoacyl synthase BAMY_11450 SM01294 BAMY_11450 BAMY_11455 SM00822 BAMY_11455 BAMY_11455 SM00823 Phosphopantetheine attachment site BAMY_11455 SM00825 Beta-ketoacyl synthase BAMY_11455 SM00826 BAMY_11455 BAMY_11455 SM01294 BAMY_11455 BAMY_11480 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BAMY_11485 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BAMY_11525 SM01350 BAMY_11525 BAMY_11570 SM00382 ATPases associated with a variety of cellular activities BAMY_11580 SM00062 Bacterial periplasmic substrate-binding proteins BAMY_11580 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BAMY_11590 SM00046 Diacylglycerol kinase catalytic domain (presumed) BAMY_11600 SM00861 Transketolase, pyrimidine binding domain BAMY_11620 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BAMY_11630 SM00091 PAS domain BAMY_11630 SM00382 ATPases associated with a variety of cellular activities BAMY_11675 SM00646 BAMY_11675 BAMY_11690 SM00530 Helix-turn-helix XRE-family like proteins BAMY_11715 SM01005 Alanine racemase, C-terminal domain BAMY_11720 SM00448 cheY-homologous receiver domain BAMY_11725 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BAMY_11740 SM00363 S4 RNA-binding domain BAMY_11745 SM00861 Transketolase, pyrimidine binding domain BAMY_11780 SM00878 Biotin carboxylase C-terminal domain BAMY_11825 SM00382 ATPases associated with a variety of cellular activities BAMY_11835 SM00841 Elongation factor P, C-terminal BAMY_11835 SM01185 BAMY_11835 BAMY_11865 SM00529 Helix-turn-helix diphteria tox regulatory element BAMY_11875 SM00450 Rhodanese Homology Domain BAMY_11895 SM00487 DEAD-like helicases superfamily BAMY_11895 SM00490 helicase superfamily c-terminal domain BAMY_11910 SM00530 Helix-turn-helix XRE-family like proteins BAMY_11970 SM00382 ATPases associated with a variety of cellular activities BAMY_11980 SM01091 Transporter associated domain BAMY_12005 SM00849 Metallo-beta-lactamase superfamily BAMY_12025 SM00631 BAMY_12025 BAMY_12060 SM00382 ATPases associated with a variety of cellular activities BAMY_12065 SM00382 ATPases associated with a variety of cellular activities BAMY_12110 SM00257 Lysin motif BAMY_12145 SM00518 AP endonuclease family 2 BAMY_12150 SM00487 DEAD-like helicases superfamily BAMY_12150 SM00490 helicase superfamily c-terminal domain BAMY_12185 SM00400 zinc finger BAMY_12185 SM00493 BAMY_12185 BAMY_12200 SM00116 Domain in cystathionine beta-synthase and other proteins. BAMY_12245 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAMY_12295 SM00729 Elongator protein 3, MiaB family, Radical SAM BAMY_12310 SM00271 DnaJ molecular chaperone homology domain BAMY_12330 SM00729 Elongator protein 3, MiaB family, Radical SAM BAMY_12335 SM00838 Elongation factor G C-terminus BAMY_12370 SM00849 Metallo-beta-lactamase superfamily BAMY_12380 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BAMY_12400 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAMY_12410 SM01103 BAMY_12410 BAMY_12470 SM00342 helix_turn_helix, arabinose operon control protein BAMY_12470 SM00871 Bacterial transcription activator, effector binding domain BAMY_12540 SM00849 Metallo-beta-lactamase superfamily BAMY_12595 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BAMY_12595 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BAMY_12680 SM00732 Likely ribonuclease with RNase H fold. BAMY_12690 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BAMY_12700 SM00382 ATPases associated with a variety of cellular activities BAMY_12705 SM00062 Bacterial periplasmic substrate-binding proteins BAMY_12705 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BAMY_12735 SM00382 ATPases associated with a variety of cellular activities BAMY_12740 SM00028 Tetratricopeptide repeats BAMY_12760 SM00382 ATPases associated with a variety of cellular activities BAMY_12785 SM00287 Bacterial SH3 domain homologues BAMY_12785 SM00646 BAMY_12785 BAMY_12795 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAMY_12795 SM00954 Region found in RelA / SpoT proteins BAMY_12845 SM01323 BAMY_12845 BAMY_12865 SM00382 ATPases associated with a variety of cellular activities BAMY_12870 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BAMY_12890 SM00257 Lysin motif BAMY_12935 SM01317 BAMY_12935 BAMY_13030 SM00257 Lysin motif BAMY_13040 SM01004 Delta-aminolevulinic acid dehydratase BAMY_13075 SM00382 ATPases associated with a variety of cellular activities BAMY_13075 SM00464 Found in ATP-dependent protease La (LON) BAMY_13080 SM00382 ATPases associated with a variety of cellular activities BAMY_13085 SM00382 ATPases associated with a variety of cellular activities BAMY_13085 SM00994 ClpX C4-type zinc finger BAMY_13085 SM01086 C-terminal, D2-small domain, of ClpB protein BAMY_13110 SM01329 BAMY_13110 BAMY_13115 SM00917 LeuA allosteric (dimerisation) domain BAMY_13170 SM00487 DEAD-like helicases superfamily BAMY_13170 SM00490 helicase superfamily c-terminal domain BAMY_13205 SM00909 Sporulation and spore germination BAMY_13215 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_13220 SM00421 helix_turn_helix, Lux Regulon BAMY_13255 SM00465 GIY-YIG type nucleases (URI domain) BAMY_13265 SM00813 Alpha-L-arabinofuranosidase C-terminus BAMY_13270 SM00893 Electron transfer flavoprotein domain BAMY_13275 SM00893 Electron transfer flavoprotein domain BAMY_13305 SM00463 Small MutS-related domain BAMY_13305 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BAMY_13305 SM00534 ATPase domain of DNA mismatch repair MUTS family BAMY_13310 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BAMY_13310 SM00481 DNA polymerase alpha chain like domain BAMY_13310 SM00483 DNA polymerase X family BAMY_13330 SM00873 B3/4 domain BAMY_13330 SM00874 tRNA synthetase B5 domain BAMY_13330 SM00896 Ferredoxin-fold anticodon binding domain BAMY_13340 SM00967 RNA 2'-O ribose methyltransferase substrate binding BAMY_13370 SM00813 Alpha-L-arabinofuranosidase C-terminus BAMY_13400 SM01007 Class II Aldolase and Adducin N-terminal domain BAMY_13460 SM00448 cheY-homologous receiver domain BAMY_13460 SM00850 LytTr DNA-binding domain BAMY_13465 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BAMY_13465 SM00387 Histidine kinase-like ATPases BAMY_13475 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BAMY_13490 SM00382 ATPases associated with a variety of cellular activities BAMY_13510 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BAMY_13540 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BAMY_13540 SM01232 BAMY_13540 BAMY_13545 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BAMY_13545 SM00474 3'-5' exonuclease BAMY_13545 SM00475 5'-3' exonuclease BAMY_13545 SM00482 DNA polymerase A domain BAMY_13550 SM00091 PAS domain BAMY_13550 SM00387 Histidine kinase-like ATPases BAMY_13550 SM00388 His Kinase A (phosphoacceptor) domain BAMY_13555 SM00448 cheY-homologous receiver domain BAMY_13555 SM00862 Transcriptional regulatory protein, C terminal BAMY_13565 SM01329 BAMY_13565 BAMY_13575 SM00028 Tetratricopeptide repeats BAMY_13630 SM00919 Malic enzyme, NAD binding domain BAMY_13630 SM01274 BAMY_13630 BAMY_13635 SM00481 DNA polymerase alpha chain like domain BAMY_13665 SM00116 Domain in cystathionine beta-synthase and other proteins. BAMY_13670 SM00849 Metallo-beta-lactamase superfamily BAMY_13690 SM00852 Probable molybdopterin binding domain BAMY_13750 SM00981 BAMY_13750 BAMY_13785 SM00267 diguanylate cyclase BAMY_13790 SM00363 S4 RNA-binding domain BAMY_13790 SM01390 BAMY_13790 BAMY_13805 SM00860 SMI1 / KNR4 family BAMY_13880 SM00363 S4 RNA-binding domain BAMY_13895 SM00116 Domain in cystathionine beta-synthase and other proteins. BAMY_13915 SM00354 helix_turn _helix lactose operon repressor BAMY_13920 SM00830 Chorismate mutase type II BAMY_13945 SM00382 ATPases associated with a variety of cellular activities BAMY_13945 SM00843 BAMY_13945 BAMY_13980 SM00919 Malic enzyme, NAD binding domain BAMY_13980 SM01274 BAMY_13980 BAMY_13985 SM00849 Metallo-beta-lactamase superfamily BAMY_14005 SM00046 Diacylglycerol kinase catalytic domain (presumed) BAMY_14040 SM00382 ATPases associated with a variety of cellular activities BAMY_14045 SM00420 helix_turn_helix, Deoxyribose operon repressor BAMY_14050 SM00363 S4 RNA-binding domain BAMY_14075 SM00354 helix_turn _helix lactose operon repressor BAMY_14105 SM00450 Rhodanese Homology Domain BAMY_14120 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BAMY_14120 SM00091 PAS domain BAMY_14140 SM00382 ATPases associated with a variety of cellular activities BAMY_14145 SM00387 Histidine kinase-like ATPases BAMY_14150 SM00448 cheY-homologous receiver domain BAMY_14150 SM00862 Transcriptional regulatory protein, C terminal BAMY_14160 SM00382 ATPases associated with a variety of cellular activities BAMY_14180 SM00382 ATPases associated with a variety of cellular activities BAMY_14185 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_14195 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAMY_14205 SM00729 Elongator protein 3, MiaB family, Radical SAM BAMY_14275 SM00382 ATPases associated with a variety of cellular activities BAMY_14315 SM01234 BAMY_14315 BAMY_14320 SM00947 Carbonic anhydrase BAMY_14345 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BAMY_14510 SM00244 prohibitin homologues BAMY_14555 SM00047 Lysozyme subfamily 2 BAMY_14565 SM00835 Cupin BAMY_14585 SM00028 Tetratricopeptide repeats BAMY_14625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAMY_14625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAMY_14625 SM00319 Homologues of the ligand binding domain of Tar BAMY_14630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAMY_14630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAMY_14630 SM00319 Homologues of the ligand binding domain of Tar BAMY_14635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAMY_14635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAMY_14635 SM00319 Homologues of the ligand binding domain of Tar BAMY_14640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BAMY_14640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAMY_14640 SM00319 Homologues of the ligand binding domain of Tar BAMY_14665 SM00642 Alpha-amylase domain BAMY_14670 SM01091 Transporter associated domain BAMY_14735 SM00316 Ribosomal protein S1-like RNA-binding domain BAMY_14745 SM00344 helix_turn_helix ASNC type BAMY_14765 SM00387 Histidine kinase-like ATPases BAMY_14765 SM00388 His Kinase A (phosphoacceptor) domain BAMY_14770 SM01298 BAMY_14770 BAMY_14775 SM00479 BAMY_14775 BAMY_14800 SM00091 PAS domain BAMY_14800 SM00387 Histidine kinase-like ATPases BAMY_14805 SM00448 cheY-homologous receiver domain BAMY_14815 SM00382 ATPases associated with a variety of cellular activities BAMY_14875 SM00421 helix_turn_helix, Lux Regulon BAMY_14875 SM00448 cheY-homologous receiver domain BAMY_14900 SM00052 Putative diguanylate phosphodiesterase BAMY_14940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAMY_14960 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BAMY_14960 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BAMY_14970 SM00923 MbtH-like protein BAMY_14975 SM00823 Phosphopantetheine attachment site BAMY_14975 SM00824 Thioesterase BAMY_14995 SM00822 BAMY_14995 BAMY_15050 SM01240 BAMY_15050 BAMY_15065 SM00382 ATPases associated with a variety of cellular activities BAMY_15085 SM00422 helix_turn_helix, mercury resistance BAMY_15175 SM00729 Elongator protein 3, MiaB family, Radical SAM BAMY_15255 SM00382 ATPases associated with a variety of cellular activities BAMY_15260 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_15260 SM00866 BAMY_15260 BAMY_15290 SM00422 helix_turn_helix, mercury resistance BAMY_15300 SM00465 GIY-YIG type nucleases (URI domain) BAMY_15345 SM00382 ATPases associated with a variety of cellular activities BAMY_15365 SM00382 ATPases associated with a variety of cellular activities BAMY_15365 SM00930 BAMY_15365 BAMY_15380 SM00493 BAMY_15380 BAMY_15430 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_15460 SM00382 ATPases associated with a variety of cellular activities BAMY_15485 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BAMY_15490 SM00448 cheY-homologous receiver domain BAMY_15490 SM00862 Transcriptional regulatory protein, C terminal BAMY_15495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAMY_15495 SM00387 Histidine kinase-like ATPases BAMY_15495 SM00388 His Kinase A (phosphoacceptor) domain BAMY_15530 SM00421 helix_turn_helix, Lux Regulon BAMY_15530 SM00448 cheY-homologous receiver domain BAMY_15535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAMY_15535 SM00387 Histidine kinase-like ATPases BAMY_15570 SM00382 ATPases associated with a variety of cellular activities BAMY_15595 SM00387 Histidine kinase-like ATPases BAMY_15595 SM00388 His Kinase A (phosphoacceptor) domain BAMY_15600 SM00448 cheY-homologous receiver domain BAMY_15600 SM00862 Transcriptional regulatory protein, C terminal BAMY_15620 SM00835 Cupin BAMY_15630 SM00382 ATPases associated with a variety of cellular activities BAMY_15690 SM00421 helix_turn_helix, Lux Regulon BAMY_15690 SM00448 cheY-homologous receiver domain BAMY_15700 SM00382 ATPases associated with a variety of cellular activities BAMY_15815 SM00382 ATPases associated with a variety of cellular activities BAMY_15830 SM00062 Bacterial periplasmic substrate-binding proteins BAMY_15835 SM00062 Bacterial periplasmic substrate-binding proteins BAMY_15880 SM00316 Ribosomal protein S1-like RNA-binding domain BAMY_15880 SM00357 Cold shock protein domain BAMY_15880 SM00955 BAMY_15880 BAMY_15895 SM00530 Helix-turn-helix XRE-family like proteins BAMY_15900 SM00530 Helix-turn-helix XRE-family like proteins BAMY_15905 SM00530 Helix-turn-helix XRE-family like proteins BAMY_15915 SM00387 Histidine kinase-like ATPases BAMY_15915 SM00388 His Kinase A (phosphoacceptor) domain BAMY_15920 SM00448 cheY-homologous receiver domain BAMY_15920 SM00862 Transcriptional regulatory protein, C terminal BAMY_15935 SM00382 ATPases associated with a variety of cellular activities BAMY_15955 SM00116 Domain in cystathionine beta-synthase and other proteins. BAMY_15955 SM00382 ATPases associated with a variety of cellular activities BAMY_15980 SM00116 Domain in cystathionine beta-synthase and other proteins. BAMY_15980 SM00382 ATPases associated with a variety of cellular activities BAMY_16015 SM00382 ATPases associated with a variety of cellular activities BAMY_16020 SM01260 BAMY_16020 BAMY_16030 SM01260 BAMY_16030 BAMY_16040 SM01192 BAMY_16040 BAMY_16040 SM01193 BAMY_16040 BAMY_16065 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BAMY_16080 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_16115 SM00354 helix_turn _helix lactose operon repressor BAMY_16165 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_16165 SM00895 BAMY_16165 BAMY_16260 SM00530 Helix-turn-helix XRE-family like proteins BAMY_16330 SM00640 Glycosyl hydrolases family 32 BAMY_16340 SM00354 helix_turn _helix lactose operon repressor BAMY_16380 SM00947 Carbonic anhydrase BAMY_16435 SM00028 Tetratricopeptide repeats BAMY_16440 SM00387 Histidine kinase-like ATPases BAMY_16440 SM00388 His Kinase A (phosphoacceptor) domain BAMY_16445 SM00448 cheY-homologous receiver domain BAMY_16445 SM00862 Transcriptional regulatory protein, C terminal BAMY_16455 SM00382 ATPases associated with a variety of cellular activities BAMY_16535 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_16535 SM00866 BAMY_16535 BAMY_16575 SM00382 ATPases associated with a variety of cellular activities BAMY_16580 SM00487 DEAD-like helicases superfamily BAMY_16580 SM00490 helicase superfamily c-terminal domain BAMY_16635 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BAMY_16645 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BAMY_16645 SM00245 tail specific protease BAMY_16650 SM00710 Parallel beta-helix repeats BAMY_16660 SM00382 ATPases associated with a variety of cellular activities BAMY_16675 SM00937 BAMY_16675 BAMY_16680 SM00957 SecA DEAD-like domain BAMY_16680 SM00958 SecA preprotein cross-linking domain BAMY_16765 SM00487 DEAD-like helicases superfamily BAMY_16765 SM00490 helicase superfamily c-terminal domain BAMY_16775 SM00421 helix_turn_helix, Lux Regulon BAMY_16775 SM00448 cheY-homologous receiver domain BAMY_16780 SM00387 Histidine kinase-like ATPases BAMY_16820 SM00984 UDP binding domain BAMY_16840 SM00646 BAMY_16840 BAMY_16870 SM00382 ATPases associated with a variety of cellular activities BAMY_16905 SM00047 Lysozyme subfamily 2 BAMY_16905 SM00287 Bacterial SH3 domain homologues BAMY_16960 SM00854 Bacterial capsule synthesis protein PGA_cap BAMY_16990 SM00354 helix_turn _helix lactose operon repressor BAMY_17005 SM00382 ATPases associated with a variety of cellular activities BAMY_17020 SM00287 Bacterial SH3 domain homologues BAMY_17070 SM00903 Flavin reductase like domain BAMY_17085 SM00344 helix_turn_helix ASNC type BAMY_17120 SM00984 UDP binding domain BAMY_17145 SM00487 DEAD-like helicases superfamily BAMY_17145 SM00490 helicase superfamily c-terminal domain BAMY_17155 SM00420 helix_turn_helix, Deoxyribose operon repressor BAMY_17155 SM01134 BAMY_17155 BAMY_17185 SM00028 Tetratricopeptide repeats BAMY_17210 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_17240 SM00938 Nitrogen regulatory protein P-II BAMY_17250 SM00014 Acid phosphatase homologues BAMY_17280 SM00155 Phospholipase D. Active site motifs. BAMY_17330 SM00028 Tetratricopeptide repeats BAMY_17335 SM00729 Elongator protein 3, MiaB family, Radical SAM BAMY_17345 SM00327 von Willebrand factor (vWF) type A domain BAMY_17350 SM00327 von Willebrand factor (vWF) type A domain BAMY_17385 SM00382 ATPases associated with a variety of cellular activities BAMY_17445 SM00226 Low molecular weight phosphatase family BAMY_17485 SM00937 BAMY_17485 BAMY_17505 SM00919 Malic enzyme, NAD binding domain BAMY_17505 SM01274 BAMY_17505 BAMY_17520 SM00357 Cold shock protein domain BAMY_17520 SM00382 ATPases associated with a variety of cellular activities BAMY_17520 SM00959 Rho termination factor, N-terminal domain BAMY_17545 SM00448 cheY-homologous receiver domain BAMY_17570 SM00155 Phospholipase D. Active site motifs. BAMY_17585 SM00382 ATPases associated with a variety of cellular activities BAMY_17590 SM00155 Phospholipase D. Active site motifs. BAMY_17615 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BAMY_17630 SM00100 Cyclic nucleotide-monophosphate binding domain BAMY_17630 SM00419 helix_turn_helix, cAMP Regulatory protein BAMY_17640 SM00836 DALR anticodon binding domain BAMY_17640 SM01016 Arginyl tRNA synthetase N terminal dom BAMY_17650 SM00028 Tetratricopeptide repeats BAMY_17680 SM00836 DALR anticodon binding domain BAMY_17680 SM01016 Arginyl tRNA synthetase N terminal dom BAMY_17720 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_17740 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAMY_17765 SM00382 ATPases associated with a variety of cellular activities BAMY_17880 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BAMY_17920 SM00858 BAMY_17920 BAMY_17965 SM00986 Uracil DNA glycosylase superfamily BAMY_17965 SM00987 UreE urease accessory protein, C-terminal domain BAMY_18000 SM00640 Glycosyl hydrolases family 32 BAMY_18010 SM01061 CAT RNA binding domain BAMY_18150 SM00422 helix_turn_helix, mercury resistance BAMY_18155 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BAMY_18180 SM00954 Region found in RelA / SpoT proteins BAMY_18265 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAMY_18310 SM01060 BAMY_18310 BAMY_18330 SM00382 ATPases associated with a variety of cellular activities BAMY_18335 SM00382 ATPases associated with a variety of cellular activities BAMY_18360 SM00382 ATPases associated with a variety of cellular activities BAMY_18420 SM01060 BAMY_18420 BAMY_18445 SM00487 DEAD-like helicases superfamily BAMY_18445 SM00490 helicase superfamily c-terminal domain BAMY_18530 SM00656 BAMY_18530 BAMY_18550 SM00487 DEAD-like helicases superfamily BAMY_18550 SM00490 helicase superfamily c-terminal domain BAMY_18595 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BAMY_18605 SM01133 BAMY_18605 BAMY_18660 SM00382 ATPases associated with a variety of cellular activities BAMY_18665 SM00387 Histidine kinase-like ATPases BAMY_18670 SM00448 cheY-homologous receiver domain BAMY_18670 SM00862 Transcriptional regulatory protein, C terminal BAMY_18725 SM00420 helix_turn_helix, Deoxyribose operon repressor BAMY_18725 SM01134 BAMY_18725 BAMY_18740 SM00387 Histidine kinase-like ATPases BAMY_18755 SM00421 helix_turn_helix, Lux Regulon BAMY_18755 SM00448 cheY-homologous receiver domain BAMY_18785 SM00564 beta-propeller repeat BAMY_18795 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BAMY_18840 SM01092 CO dehydrogenase flavoprotein C-terminal domain BAMY_18845 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BAMY_18880 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BAMY_18925 SM00028 Tetratricopeptide repeats BAMY_18945 SM00382 ATPases associated with a variety of cellular activities BAMY_18950 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BAMY_18955 SM00382 ATPases associated with a variety of cellular activities BAMY_18975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAMY_18975 SM00387 Histidine kinase-like ATPases BAMY_18975 SM00388 His Kinase A (phosphoacceptor) domain BAMY_18985 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BAMY_18990 SM00849 Metallo-beta-lactamase superfamily BAMY_19005 SM00091 PAS domain BAMY_19005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BAMY_19005 SM00387 Histidine kinase-like ATPases BAMY_19005 SM00388 His Kinase A (phosphoacceptor) domain BAMY_19010 SM00448 cheY-homologous receiver domain BAMY_19010 SM00862 Transcriptional regulatory protein, C terminal BAMY_19040 SM00788 Adenylosuccinate synthetase BAMY_19050 SM00382 ATPases associated with a variety of cellular activities BAMY_19110 SM00267 diguanylate cyclase BAMY_19130 SM01131 BAMY_19130 BAMY_19155 SM00640 Glycosyl hydrolases family 32 BAMY_19160 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_19160 SM00895 BAMY_19160 BAMY_19185 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_19195 SM00347 helix_turn_helix multiple antibiotic resistance protein BAMY_19245 SM00345 helix_turn_helix gluconate operon transcriptional repressor BAMY_19255 SM00422 helix_turn_helix, mercury resistance BAMY_19255 SM00871 Bacterial transcription activator, effector binding domain BAMY_19285 SM00354 helix_turn _helix lactose operon repressor BAMY_19300 SM00342 helix_turn_helix, arabinose operon control protein BAMY_19325 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BAMY_19350 SM00470 ParB-like nuclease domain BAMY_19360 SM00470 ParB-like nuclease domain BAMY_19370 SM01228 BAMY_19370 BAMY_19380 SM00393 Putative single-stranded nucleic acids-binding domain BAMY_19380 SM01245 BAMY_19380