locus-tag	class	description
MUS_0003	COG0592	DNA-directed DNA polymerase activity
MUS_0004	COG2501	S4 domain
MUS_0007	COG0187	DNA topoisomerase II activity
MUS_0008	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
MUS_0011	COG0516	GMP reductase activity
MUS_0011	COG0517	IMP dehydrogenase activity
MUS_0012	COG1686	Belongs to the peptidase S11 family
MUS_0016	COG1929	Belongs to the glycerate kinase type-1 family
MUS_0018	COG1428	Deoxynucleoside kinase
MUS_0019	COG1428	Deoxynucleoside kinase
MUS_0020	COG3858	chitin binding
MUS_0020	COG1388	LysM domain
MUS_0021	COG1335	isochorismatase
MUS_0022	COG0590	tRNA wobble adenosine to inosine editing
MUS_0024	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
MUS_0025	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
MUS_0031	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
MUS_0032	COG3853	Toxic anion resistance protein (TelA)
MUS_0033	COG1982	Orn Lys Arg decarboxylase major
MUS_0035	COG3870	Protein conserved in bacteria
MUS_0036	COG1728	Protein conserved in bacteria
MUS_0037	COG0470	DNA polymerase III
MUS_0038	COG1774	PSP1 C-terminal conserved region
MUS_0040	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
MUS_0042	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
MUS_0043	COG2002	toxin-antitoxin pair type II binding
MUS_0044	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MUS_0044	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MUS_0045	COG0084	hydrolase, TatD family'
MUS_0046	COG3583	domain protein
MUS_0046	COG3584	3D domain protein
MUS_0047	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
MUS_0048	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
MUS_0050	COG4466	Protein conserved in bacteria
MUS_0053	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
MUS_0054	COG0251	oxidation-reduction process
MUS_0057	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
MUS_0061	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
MUS_0062	COG2002	toxin-antitoxin pair type II binding
MUS_0063	COG2244	polysaccharide biosynthetic process
MUS_0064	COG3956	TIGRFAM MazG family protein
MUS_0065	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
MUS_0068	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
MUS_0069	COG1098	S1 RNA binding domain
MUS_0071	COG2208	phosphoserine phosphatase activity
MUS_0072	COG2304	oxidoreductase activity
MUS_0073	COG0515	serine threonine protein kinase
MUS_0074	COG0037	tRNA processing
MUS_0076	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MUS_0080	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
MUS_0081	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
MUS_0082	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
MUS_0083	COG0512	Glutamine amidotransferase of anthranilate synthase
MUS_0084	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
MUS_0085	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
MUS_0086	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
MUS_0087	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
MUS_0088	COG1396	sequence-specific DNA binding
MUS_0089	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
MUS_0090	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
MUS_0093	COG4463	regulation of RNA biosynthetic process
MUS_0094	COG3880	PFAM UvrB UvrC protein
MUS_0096	COG0542	response to heat
MUS_0097	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
MUS_0098	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
MUS_0099	COG4956	integral membrane protein (PIN domain superfamily)
MUS_0104	COG1045	serine acetyltransferase
MUS_0106	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
MUS_0107	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MUS_0108	COG3688	RNA-binding protein containing a PIN domain
MUS_0109	COG1595	DNA-templated transcription, initiation
MUS_0110	COG0267	Belongs to the bacterial ribosomal protein bL33 family
MUS_0111	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
MUS_0112	COG0250	Participates in transcription elongation, termination and antitermination
MUS_0113	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
MUS_0116	COG0222	ribosome binding
MUS_0117	COG2813	Specifically methylates the guanine in position
MUS_0120	COG1358	cellular component organization or biogenesis
MUS_0124	COG0596	Alpha beta hydrolase
MUS_0129	COG0089	rRNA binding
MUS_0132	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
MUS_0133	COG0255	Belongs to the universal ribosomal protein uL29 family
MUS_0141	COG1841	ribosomal large subunit assembly
MUS_0143	COG0200	Binds to the 23S rRNA
MUS_0144	COG0201	protein transport
MUS_0146	COG0024	Methionine aminopeptidase
MUS_0149	COG1122	ATPase activity
MUS_0150	COG1122	ATPase activity
MUS_0151	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
MUS_0153	COG2226	methyltransferase
MUS_0154	COG2318	DinB family
MUS_0156	COG0860	N-Acetylmuramoyl-L-alanine amidase
MUS_0157	COG0489	protein tyrosine kinase activity
MUS_0159	COG2194	sulfuric ester hydrolase activity
MUS_0160	COG0726	polysaccharide deacetylase
MUS_0166	COG0738	Major facilitator superfamily
MUS_0167	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
MUS_0170	COG0659	secondary active sulfate transmembrane transporter activity
MUS_0171	COG0385	Bile acid
MUS_0172	COG2819	hydrolase of the alpha beta superfamily
MUS_0173	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUS_0174	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUS_0175	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
MUS_0176	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
MUS_0176	COG2207	Transcriptional regulator
MUS_0177	COG3876	Protein conserved in bacteria
MUS_0178	COG1472	Belongs to the glycosyl hydrolase 3 family
MUS_0179	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
MUS_0180	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUS_0180	COG1263	PTS System
MUS_0182	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MUS_0183	COG1683	Conserved Protein
MUS_0184	COG1595	DNA-templated transcription, initiation
MUS_0185	COG5662	AntiSigma factor
MUS_0186	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
MUS_0187	COG4856	YbbR-like protein
MUS_0199	COG1346	cytolysis
MUS_0200	COG1380	Effector of murein hydrolase LrgA
MUS_0201	COG1846	Transcriptional regulator
MUS_0202	COG1113	amino acid transport
MUS_0203	COG1011	Hydrolase
MUS_0204	COG4585	Histidine kinase
MUS_0205	COG2197	response regulator
MUS_0206	COG1131	(ABC) transporter
MUS_0214	COG0531	amino acid
MUS_0215	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
MUS_0218	COG0584	glycerophosphoryl diester phosphodiesterase
MUS_0219	COG2271	Major facilitator Superfamily
MUS_0220	COG2368	4-hydroxyphenylacetate
MUS_0222	COG3409	Peptidoglycan-binding domain 1 protein
MUS_0226	COG0371	Dehydrogenase
MUS_0229	COG1183	phosphatidylcholine synthase activity
MUS_0230	COG0586	Pfam SNARE associated Golgi protein
MUS_0231	COG0688	phosphatidylethanolamine metabolic process
MUS_0234	COG1301	dicarboxylic acid transport
MUS_0235	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
MUS_0236	COG0833	amino acid
MUS_0237	COG2040	homocysteine
MUS_0239	COG1115	amino acid carrier protein
MUS_0240	COG2066	Belongs to the glutaminase family
MUS_0241	COG4191	Histidine kinase
MUS_0242	COG0784	Response regulator, receiver
MUS_0243	COG3173	Aminoglycoside phosphotransferase
MUS_0246	COG3773	Cell wall hydrolase
MUS_0248	COG3540	Alkaline phosphatase
MUS_0249	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
MUS_0250	COG0805	protein transport
MUS_0252	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
MUS_0253	COG0477	Major facilitator Superfamily
MUS_0254	COG1309	transcriptional regulator
MUS_0256	COG0252	asparaginase activity
MUS_0257	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
MUS_0258	COG1405	negative regulation of cell septum assembly
MUS_0258	COG3012	SEC-C Motif Domain Protein
MUS_0259	COG0667	Aldo Keto reductase
MUS_0261	COG1595	DNA-templated transcription, initiation
MUS_0262	COG1595	DNA-templated transcription, initiation
MUS_0263	COG1876	peptidase activity
MUS_0264	COG0457	Tetratricopeptide repeat
MUS_0266	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_0267	COG0366	Alpha amylase catalytic
MUS_0268	COG0803	Belongs to the bacterial solute-binding protein 9 family
MUS_0269	COG1121	(ABC) transporter
MUS_0270	COG1108	ABC-type Mn2 Zn2 transport systems permease components
MUS_0271	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUS_0272	COG2310	stress, protein
MUS_0273	COG2310	stress, protein
MUS_0274	COG2310	stress, protein
MUS_0275	COG0861	Integral membrane protein TerC family
MUS_0277	COG3853	Toxic anion resistance protein (TelA)
MUS_0278	COG0477	Major facilitator Superfamily
MUS_0279	COG0517	IMP dehydrogenase activity
MUS_0279	COG4175	Glycine betaine
MUS_0280	COG4176	ABC-type proline glycine betaine transport system permease component
MUS_0281	COG2113	Glycine betaine
MUS_0282	COG1473	amidohydrolase
MUS_0283	COG1288	antiporter activity
MUS_0286	COG0366	Alpha amylase catalytic
MUS_0288	COG2814	Major facilitator Superfamily
MUS_0289	COG1846	Transcriptional regulator
MUS_0290	COG1280	lysine exporter protein (LysE YggA)
MUS_0291	COG3403	YqcI/YcgG family
MUS_0292	COG1113	amino acid transport
MUS_0293	COG3665	Urea carboxylase-associated protein
MUS_0296	COG1660	Displays ATPase and GTPase activities
MUS_0298	COG2271	Major facilitator Superfamily
MUS_0299	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
MUS_0300	COG3458	cephalosporin-C deacetylase activity
MUS_0301	COG3541	Predicted nucleotidyltransferase
MUS_0303	COG0506	proline dehydrogenase activity
MUS_0304	COG1012	belongs to the aldehyde dehydrogenase family
MUS_0305	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MUS_0307	COG2508	Transcriptional regulator
MUS_0309	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
MUS_0309	COG1587	Uroporphyrinogen-III synthase
MUS_0310	COG2146	nitrite reductase [NAD(P)H] activity
MUS_0311	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MUS_0312	COG0243	molybdopterin cofactor binding
MUS_0313	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MUS_0315	COG2223	nitrite transmembrane transporter activity
MUS_0316	COG0523	cobalamin synthesis protein
MUS_0317	COG1063	alcohol dehydrogenase
MUS_0318	COG1714	RDD family
MUS_0320	COG2723	6-phospho-beta-galactosidase activity
MUS_0322	COG3209	COG3209 Rhs family protein
MUS_0324	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
MUS_0325	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
MUS_0326	COG1733	regulation of RNA biosynthetic process
MUS_0329	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_0330	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_0331	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
MUS_0335	COG2364	Membrane
MUS_0336	COG1126	abc transporter atp-binding protein
MUS_0337	COG0765	amino acid transport
MUS_0338	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MUS_0339	COG0583	DNA-binding transcription factor activity
MUS_0340	COG0163	prenyltransferase activity
MUS_0341	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
MUS_0344	COG3104	oligopeptide transport
MUS_0345	COG5434	Belongs to the glycosyl hydrolase 28 family
MUS_0347	COG0697	spore germination
MUS_0350	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
MUS_0353	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MUS_0354	COG0765	amino acid transport
MUS_0355	COG1126	abc transporter atp-binding protein
MUS_0357	COG2079	MmgE PrpD family protein
MUS_0358	COG1136	(ABC) transporter
MUS_0359	COG0577	efflux transmembrane transporter activity
MUS_0361	COG0745	RESPONSE REGULATOR receiver
MUS_0362	COG3850	Histidine kinase
MUS_0362	COG5002	protein histidine kinase activity
MUS_0364	COG0457	Tetratricopeptide repeat
MUS_0366	COG0527	aspartate kinase activity
MUS_0368	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUS_0369	COG4605	iron ion homeostasis
MUS_0370	COG4604	ABC transporter, ATP-binding protein
MUS_0371	COG4607	ABC-type enterochelin transport system periplasmic component
MUS_0372	COG2814	Major facilitator Superfamily
MUS_0373	COG1309	transcriptional regulator
MUS_0374	COG0778	Nitroreductase
MUS_0375	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
MUS_0376	COG0640	Transcriptional regulator
MUS_0377	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MUS_0378	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
MUS_0379	COG1012	belongs to the aldehyde dehydrogenase family
MUS_0380	COG4975	Glucose uptake
MUS_0382	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_0383	COG4549	nuclear export factor GLE1
MUS_0384	COG1276	copper resistance
MUS_0384	COG2372	response to copper ion
MUS_0385	COG1349	DNA-binding transcription factor activity
MUS_0387	COG2213	PTS system mannitol-specific
MUS_0388	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUS_0395	COG0561	phosphatase activity
MUS_0397	COG1914	H( )-stimulated, divalent metal cation uptake system
MUS_0400	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
MUS_0401	COG1984	allophanate hydrolase subunit 2
MUS_0402	COG1414	Transcriptional regulator
MUS_0403	COG2755	lipolytic protein G-D-S-L family
MUS_0405	COG2329	Antibiotic biosynthesis monooxygenase
MUS_0406	COG0768	penicillin binding
MUS_0407	COG4989	oxidoreductase activity
MUS_0408	COG3711	transcriptional antiterminator
MUS_0409	COG0318	PFAM AMP-dependent synthetase and ligase
MUS_0411	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_0412	COG1917	Cupin 2, conserved barrel domain protein
MUS_0413	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MUS_0414	COG3871	stress protein (general stress protein 26)
MUS_0416	COG2814	Major facilitator Superfamily
MUS_0417	COG1522	sequence-specific DNA binding
MUS_0418	COG0551	DNA topoisomerase type I activity
MUS_0418	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
MUS_0419	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
MUS_0420	COG3706	GGDEF domain
MUS_0421	COG5298	Protein conserved in bacteria
MUS_0422	COG1215	transferase activity, transferring glycosyl groups
MUS_0424	COG0531	amino acid
MUS_0425	COG0494	nUDIX hydrolase
MUS_0426	COG0028	Belongs to the TPP enzyme family
MUS_0433	COG1914	H( )-stimulated, divalent metal cation uptake system
MUS_0436	COG4876	unkown
MUS_0438	COG2076	Multidrug Resistance protein
MUS_0439	COG2217	Heavy metal translocating P-type atpase
MUS_0443	COG0662	Cupin 2, conserved barrel domain protein
MUS_0444	COG2329	Antibiotic biosynthesis monooxygenase
MUS_0445	COG3546	catalase activity
MUS_0446	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
MUS_0447	COG3290	protein histidine kinase activity
MUS_0448	COG4565	transcriptional regulatory protein
MUS_0449	COG1301	dicarboxylic acid transport
MUS_0450	COG0628	permease
MUS_0451	COG1131	(ABC) transporter
MUS_0452	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
MUS_0454	COG1960	acyl-CoA dehydrogenase activity
MUS_0457	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
MUS_0458	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUS_0460	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
MUS_0462	COG0513	Belongs to the DEAD box helicase family
MUS_0463	COG3402	PFAM membrane-flanked domain
MUS_0464	COG3428	Bacterial PH domain
MUS_0465	COG0705	Rhomboid family
MUS_0467	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
MUS_0468	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
MUS_0469	COG0864	Transcriptional regulator
MUS_0470	COG2337	Toxic component of a toxin-antitoxin (TA) module
MUS_0471	COG1366	Belongs to the anti-sigma-factor antagonist family
MUS_0472	COG1366	Belongs to the anti-sigma-factor antagonist family
MUS_0473	COG2208	phosphoserine phosphatase activity
MUS_0474	COG1366	Belongs to the anti-sigma-factor antagonist family
MUS_0476	COG1191	sigma factor activity
MUS_0477	COG2208	phosphoserine phosphatase activity
MUS_0478	COG2183	response to ionizing radiation
MUS_0481	COG0457	Tetratricopeptide repeat
MUS_0482	COG0477	Major facilitator Superfamily
MUS_0485	COG2030	dehydratase
MUS_0489	COG1959	2 iron, 2 sulfur cluster binding
MUS_0490	COG2910	NAD(P)H-binding
MUS_0492	COG1309	transcriptional regulator
MUS_0493	COG3239	Fatty acid desaturase
MUS_0495	COG1278	Cold shock
MUS_0496	COG1329	Transcriptional regulator
MUS_0497	COG2210	Belongs to the sulfur carrier protein TusA family
MUS_0499	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
MUS_0499	COG0425	Belongs to the sulfur carrier protein TusA family
MUS_0500	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUS_0500	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
MUS_0501	COG0425	Belongs to the sulfur carrier protein TusA family
MUS_0502	COG0730	response to heat
MUS_0503	COG1794	racemase activity, acting on amino acids and derivatives
MUS_0506	COG3621	Patatin-like phospholipase
MUS_0508	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
MUS_0510	COG0251	oxidation-reduction process
MUS_0511	COG0814	amino acid
MUS_0512	COG1473	amidohydrolase
MUS_0513	COG2207	Transcriptional regulator
MUS_0513	COG1917	Cupin 2, conserved barrel domain protein
MUS_0515	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MUS_0516	COG0477	Major facilitator Superfamily
MUS_0519	COG0277	FAD linked oxidase domain protein
MUS_0526	COG2318	DinB family
MUS_0527	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MUS_0533	COG0351	phosphomethylpyrimidine kinase
MUS_0537	COG1064	alcohol dehydrogenase
MUS_0538	COG0789	Transcriptional regulator
MUS_0542	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MUS_0546	COG2814	Major facilitator Superfamily
MUS_0547	COG1309	transcriptional regulator
MUS_0549	COG0697	spore germination
MUS_0551	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MUS_0552	COG5577	PFAM Coat F domain
MUS_0554	COG1063	alcohol dehydrogenase
MUS_0555	COG5577	PFAM Coat F domain
MUS_0557	COG0738	Major facilitator superfamily
MUS_0561	COG4585	Histidine kinase
MUS_0562	COG2197	response regulator
MUS_0563	COG2409	Drug exporters of the RND superfamily
MUS_0564	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
MUS_0566	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MUS_0567	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
MUS_0569	COG2814	Major facilitator Superfamily
MUS_0570	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
MUS_0572	COG0730	response to heat
MUS_0573	COG0456	acetyltransferase
MUS_0574	COG4978	Transcriptional regulator
MUS_0574	COG0789	Transcriptional regulator
MUS_0575	COG0697	spore germination
MUS_0576	COG1051	belongs to the nudix hydrolase family
MUS_0577	COG2226	methyltransferase
MUS_0579	COG0473	3-isopropylmalate dehydrogenase activity
MUS_0580	COG1802	Transcriptional regulator
MUS_0582	COG1819	glycosyl
MUS_0585	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
MUS_0588	COG1388	LysM domain
MUS_0589	COG2814	Major facilitator Superfamily
MUS_0590	COG2188	Transcriptional regulator
MUS_0591	COG2186	Transcriptional regulator
MUS_0592	COG2807	transmembrane transport
MUS_0593	COG2076	Multidrug Resistance protein
MUS_0594	COG2076	Multidrug Resistance protein
MUS_0595	COG1309	transcriptional regulator
MUS_0596	COG0531	amino acid
MUS_0598	COG3832	glyoxalase III activity
MUS_0599	COG0604	alcohol dehydrogenase
MUS_0600	COG2814	Major facilitator Superfamily
MUS_0603	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
MUS_0604	COG0802	atpase or kinase
MUS_0605	COG1214	PFAM Peptidase M22, glycoprotease
MUS_0606	COG0456	acetyltransferase
MUS_0607	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
MUS_0608	COG0488	(ABC) transporter
MUS_0611	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
MUS_0612	COG0805	protein transport
MUS_0614	COG1266	CAAX protease self-immunity
MUS_0615	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
MUS_0618	COG0457	Tetratricopeptide repeat
MUS_0619	COG1063	alcohol dehydrogenase
MUS_0620	COG2211	Major facilitator Superfamily
MUS_0621	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
MUS_0623	COG1842	Phage shock protein A
MUS_0624	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
MUS_0625	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
MUS_0626	COG4260	virion core protein, lumpy skin disease virus
MUS_0627	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
MUS_0627	COG2755	lipolytic protein G-D-S-L family
MUS_0630	COG1595	DNA-templated transcription, initiation
MUS_0631	COG1063	alcohol dehydrogenase
MUS_0632	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
MUS_0633	COG0823	Involved in the tonB-independent uptake of proteins
MUS_0636	COG2132	Multicopper oxidase
MUS_0637	COG1113	amino acid transport
MUS_0639	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
MUS_0640	COG0714	Associated with various cellular activities
MUS_0641	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
MUS_0642	COG1305	Transglutaminase-like
MUS_0645	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
MUS_0649	COG2211	Major facilitator Superfamily
MUS_0653	COG2252	PERMEase
MUS_0654	COG3064	Membrane
MUS_0658	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
MUS_0659	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
MUS_0660	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
MUS_0661	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
MUS_0662	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
MUS_0665	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
MUS_0667	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
MUS_0668	COG0138	bifunctional purine biosynthesis protein purh
MUS_0669	COG0151	Belongs to the GarS family
MUS_0671	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
MUS_0672	COG1470	cell adhesion involved in biofilm formation
MUS_0673	COG4496	protein, YerC YecD
MUS_0674	COG0069	glutamate synthase activity
MUS_0678	COG0210	DNA helicase
MUS_0680	COG4851	CamS sex pheromone cAM373 precursor
MUS_0681	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
MUS_0682	COG1285	pathogenesis
MUS_0683	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MUS_0687	COG1309	transcriptional regulator
MUS_0688	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
MUS_0689	COG1597	lipid kinase activity
MUS_0690	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
MUS_0691	COG1136	(ABC) transporter
MUS_0693	COG1131	(ABC) transporter
MUS_0706	COG5444	nuclease activity
MUS_0712	COG3546	catalase activity
MUS_0713	COG0454	-acetyltransferase
MUS_0715	COG2323	membrane
MUS_0716	COG2329	Antibiotic biosynthesis monooxygenase
MUS_0717	COG0346	lactoylglutathione lyase activity
MUS_0719	COG1366	Belongs to the anti-sigma-factor antagonist family
MUS_0720	COG5583	Uncharacterized small protein (DUF2292)
MUS_0721	COG0196	riboflavin kinase activity
MUS_0722	COG0670	Belongs to the BI1 family
MUS_0723	COG1846	Transcriptional regulator
MUS_0724	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MUS_0726	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
MUS_0726	COG2124	cytochrome p450
MUS_0731	COG1131	(ABC) transporter
MUS_0734	COG1368	sulfuric ester hydrolase activity
MUS_0736	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
MUS_0737	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MUS_0738	COG1442	glycosyl transferase family 8
MUS_0739	COG1216	Glycosyl transferase, family 2
MUS_0740	COG1442	glycosyl transferase family 8
MUS_0741	COG2223	nitrite transmembrane transporter activity
MUS_0742	COG0531	amino acid
MUS_0743	COG1012	belongs to the aldehyde dehydrogenase family
MUS_0744	COG0840	transmembrane signaling receptor activity
MUS_0745	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_0746	COG0463	Glycosyl transferase, family 2
MUS_0746	COG0457	Tetratricopeptide repeat
MUS_0747	COG0488	(ABC) transporter
MUS_0748	COG0789	Transcriptional regulator
MUS_0749	COG2814	Major facilitator Superfamily
MUS_0750	COG0488	(ABC) transporter
MUS_0751	COG0513	Belongs to the DEAD box helicase family
MUS_0752	COG0456	acetyltransferase
MUS_0755	COG2130	NADP-dependent
MUS_0758	COG3866	Pectate lyase
MUS_0759	COG0471	metal ion transport
MUS_0763	COG0745	RESPONSE REGULATOR receiver
MUS_0763	COG2972	Histidine kinase
MUS_0764	COG3279	Response regulator of the LytR AlgR family
MUS_0770	COG3764	Sortase (surface protein transpeptidase)
MUS_0772	COG3290	protein histidine kinase activity
MUS_0775	COG4565	transcriptional regulatory protein
MUS_0776	COG3181	Tripartite tricarboxylate transporter family receptor
MUS_0777	COG2851	Citrate transporter
MUS_0778	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUS_0779	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
MUS_0781	COG2258	MOSC domain
MUS_0785	COG0024	Methionine aminopeptidase
MUS_0786	COG1263	PTS System
MUS_0786	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUS_0789	COG1368	sulfuric ester hydrolase activity
MUS_0791	COG0071	Belongs to the small heat shock protein (HSP20) family
MUS_0793	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUS_0793	COG1263	PTS System
MUS_0794	COG0366	Alpha amylase catalytic
MUS_0795	COG2188	Transcriptional regulator
MUS_0796	COG0778	Nitroreductase
MUS_0799	COG0737	Belongs to the 5'-nucleotidase family
MUS_0800	COG0693	protein deglycase activity
MUS_0801	COG1609	Transcriptional regulator
MUS_0802	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
MUS_0804	COG2814	Major facilitator Superfamily
MUS_0806	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MUS_0807	COG4980	gas vesicle protein
MUS_0808	COG1295	ribonuclease BN
MUS_0811	COG0477	Major facilitator Superfamily
MUS_0812	COG0387	Pfam Sodium calcium exchanger
MUS_0814	COG0668	transmembrane transport
MUS_0815	COG0535	radical SAM domain protein
MUS_0817	COG0726	polysaccharide deacetylase
MUS_0822	COG0745	RESPONSE REGULATOR receiver
MUS_0823	COG2205	protein histidine kinase activity
MUS_0824	COG2084	Dehydrogenase
MUS_0826	COG0598	Magnesium transport protein CorA
MUS_0827	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
MUS_0828	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
MUS_0833	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
MUS_0834	COG4637	Psort location Cytoplasmic, score
MUS_0835	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
MUS_0836	COG0022	dehydrogenase e1 component
MUS_0837	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUS_0838	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MUS_0839	COG3284	Transcriptional regulator
MUS_0841	COG1486	melibiose metabolic process
MUS_0842	COG1737	Transcriptional regulator
MUS_0843	COG1263	PTS System
MUS_0843	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUS_0844	COG1132	(ABC) transporter
MUS_0845	COG1132	(ABC) transporter
MUS_0846	COG2259	Doxx family
MUS_0847	COG2514	catechol 2,3-dioxygenase activity
MUS_0851	COG1695	Transcriptional regulator
MUS_0853	COG2249	NAD(P)H dehydrogenase (quinone) activity
MUS_0854	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
MUS_0855	COG3848	Pyruvate phosphate dikinase
MUS_0855	COG0574	Belongs to the PEP-utilizing enzyme family
MUS_0856	COG2732	(Barnase) inhibitor
MUS_0857	COG2318	DinB family
MUS_0864	COG1846	Transcriptional regulator
MUS_0865	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
MUS_0865	COG0392	lysyltransferase activity
MUS_0866	COG0384	phenazine biosynthesis protein PhzF
MUS_0867	COG0778	Nitroreductase
MUS_0870	COG1090	epimerase
MUS_0873	COG2814	Major facilitator Superfamily
MUS_0875	COG3591	Belongs to the peptidase S1B family
MUS_0878	COG3103	Sh3 type 3 domain protein
MUS_0879	COG5658	integral membrane protein
MUS_0880	COG0596	Alpha beta hydrolase
MUS_0882	COG0463	Glycosyl transferase, family 2
MUS_0883	COG4485	Bacterial membrane protein, YfhO
MUS_0884	COG1988	membrane-bound metal-dependent
MUS_0885	COG1194	a g-specific adenine glycosylase
MUS_0887	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_0891	COG1132	(ABC) transporter
MUS_0892	COG4129	membrane
MUS_0894	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
MUS_0895	COG0735	belongs to the Fur family
MUS_0901	COG1757	Na H antiporter
MUS_0902	COG3340	Belongs to the peptidase S51 family
MUS_0904	COG0277	FAD linked oxidase domain protein
MUS_0906	COG0747	negative chemotaxis
MUS_0907	COG0601	transmembrane transport
MUS_0909	COG0444	Belongs to the ABC transporter superfamily
MUS_0910	COG4608	Belongs to the ABC transporter superfamily
MUS_0911	COG0753	catalase activity
MUS_0914	COG1116	anion transmembrane transporter activity
MUS_0915	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MUS_0916	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MUS_0922	COG1476	TRANSCRIPTIONal
MUS_0923	COG3382	B3 4 domain protein
MUS_0924	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
MUS_0926	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
MUS_0927	COG0789	Transcriptional regulator
MUS_0928	COG1664	Polymer-forming cytoskeletal
MUS_0929	COG1664	Polymer-forming cytoskeletal
MUS_0931	COG2766	serine protein kinase
MUS_0935	COG1846	Transcriptional regulator
MUS_0936	COG1566	PFAM secretion protein HlyD family protein
MUS_0937	COG2814	Major facilitator Superfamily
MUS_0938	COG0655	NAD(P)H dehydrogenase (quinone) activity
MUS_0941	COG1725	Transcriptional regulator
MUS_0942	COG1131	(ABC) transporter
MUS_0943	COG1131	(ABC) transporter
MUS_0944	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
MUS_0945	COG1278	Cold shock
MUS_0946	COG1464	Belongs to the NlpA lipoprotein family
MUS_0947	COG3706	GGDEF domain
MUS_0948	COG1823	symporter activity
MUS_0954	COG5577	PFAM Coat F domain
MUS_0956	COG1525	nuclease
MUS_0956	COG4085	toxin activity
MUS_0956	COG0737	Belongs to the 5'-nucleotidase family
MUS_0957	COG3764	Sortase (surface protein transpeptidase)
MUS_0958	COG0564	pseudouridine synthase activity
MUS_0960	COG0517	IMP dehydrogenase activity
MUS_0961	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
MUS_0962	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
MUS_0962	COG3153	acetyltransferase
MUS_0963	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
MUS_0965	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
MUS_0966	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
MUS_0968	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
MUS_0969	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MUS_0970	COG2203	Gaf domain
MUS_0970	COG4585	Histidine kinase
MUS_0971	COG2197	response regulator
MUS_0972	COG0431	NADPH-dependent FMN reductase
MUS_0975	COG0791	NLP P60 protein
MUS_0975	COG1388	LysM domain
MUS_0976	COG1959	2 iron, 2 sulfur cluster binding
MUS_0978	COG0668	transmembrane transport
MUS_0979	COG2719	SpoVR family
MUS_0980	COG1785	Belongs to the alkaline phosphatase family
MUS_0981	COG0791	NLP P60 protein
MUS_0981	COG1388	LysM domain
MUS_0982	COG0583	DNA-binding transcription factor activity
MUS_0983	COG0372	Belongs to the citrate synthase family
MUS_0984	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_0985	COG0531	amino acid
MUS_0986	COG0733	neurotransmitter:sodium symporter activity
MUS_0989	COG1595	DNA-templated transcription, initiation
MUS_0990	COG0204	Acyl-transferase
MUS_0991	COG1253	flavin adenine dinucleotide binding
MUS_0993	COG0789	Transcriptional regulator
MUS_0994	COG0436	Aminotransferase
MUS_0995	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
MUS_0997	COG1253	flavin adenine dinucleotide binding
MUS_0998	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MUS_0999	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MUS_1000	COG0584	glycerophosphoryl diester phosphodiesterase
MUS_1003	COG0668	transmembrane transport
MUS_1004	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
MUS_1005	COG0726	polysaccharide deacetylase
MUS_1006	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
MUS_1007	COG3226	Transcriptional regulator
MUS_1009	COG0589	response to stress
MUS_1011	COG1132	(ABC) transporter
MUS_1014	COG1132	(ABC) transporter
MUS_1015	COG0702	epimerase
MUS_1018	COG0189	ligase activity
MUS_1019	COG0189	ligase activity
MUS_1022	COG4335	DNA alkylation repair
MUS_1023	COG0561	phosphatase activity
MUS_1024	COG0635	Involved in the biosynthesis of porphyrin-containing compound
MUS_1026	COG0475	glutathione-regulated potassium exporter activity
MUS_1027	COG0490	domain, Protein
MUS_1029	COG1024	Enoyl-CoA hydratase
MUS_1031	COG4152	abc transporter atp-binding protein
MUS_1032	COG1668	transmembrane transport
MUS_1034	COG0420	3'-5' exonuclease activity
MUS_1036	COG4717	serine-type aminopeptidase activity
MUS_1041	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
MUS_1048	COG4980	gas vesicle protein
MUS_1051	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
MUS_1052	COG0537	adenosine 5'-monophosphoramidase activity
MUS_1053	COG1131	(ABC) transporter
MUS_1054	COG4473	ABC transporter
MUS_1057	COG1473	amidohydrolase
MUS_1061	COG3069	C4-dicarboxylate transmembrane transporter activity
MUS_1062	COG2329	Antibiotic biosynthesis monooxygenase
MUS_1063	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MUS_1067	COG1309	transcriptional regulator
MUS_1068	COG1511	domain protein
MUS_1069	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
MUS_1072	COG1363	Peptidase, m42
MUS_1073	COG1301	dicarboxylic acid transport
MUS_1075	COG1234	tRNA 3'-trailer cleavage
MUS_1076	COG0095	Lipoate-protein ligase
MUS_1077	COG0702	epimerase
MUS_1078	COG0318	PFAM AMP-dependent synthetase and ligase
MUS_1080	COG0501	Belongs to the peptidase M48B family
MUS_1081	COG1404	Belongs to the peptidase S8 family
MUS_1083	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
MUS_1085	COG0406	alpha-ribazole phosphatase activity
MUS_1086	COG0183	Belongs to the thiolase family
MUS_1087	COG0318	PFAM AMP-dependent synthetase and ligase
MUS_1088	COG1268	BioY protein
MUS_1089	COG0840	transmembrane signaling receptor activity
MUS_1090	COG0723	plastoquinol--plastocyanin reductase activity
MUS_1090	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
MUS_1091	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_1093	COG4903	ComK protein
MUS_1094	COG5646	InterPro IPR014922
MUS_1102	COG0398	Pfam SNARE associated Golgi protein
MUS_1103	COG0681	Belongs to the peptidase S26 family
MUS_1104	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
MUS_1105	COG1846	Transcriptional regulator
MUS_1106	COG3180	Ammonia monooxygenase
MUS_1107	COG2814	Major facilitator Superfamily
MUS_1109	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
MUS_1110	COG2323	membrane
MUS_1113	COG0420	3'-5' exonuclease activity
MUS_1114	COG0419	ATPase involved in DNA repair
MUS_1115	COG1403	HNH endonuclease
MUS_1123	COG0179	Fumarylacetoacetate (FAA) hydrolase
MUS_1127	COG0367	asparagine synthase
MUS_1128	COG1562	ergosterol biosynthetic process
MUS_1129	COG0534	Mate efflux family protein
MUS_1130	COG2207	Transcriptional regulator
MUS_1130	COG1917	Cupin 2, conserved barrel domain protein
MUS_1131	COG1609	Transcriptional regulator
MUS_1133	COG0673	inositol 2-dehydrogenase activity
MUS_1134	COG2318	DinB family
MUS_1135	COG1279	arginine transmembrane transporter activity
MUS_1136	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MUS_1137	COG1357	PFAM Pentapeptide repeats (8 copies)
MUS_1138	COG2153	protein acetylation
MUS_1139	COG0646	methionine synthase
MUS_1139	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
MUS_1142	COG2996	Protein conserved in bacteria
MUS_1145	COG0840	transmembrane signaling receptor activity
MUS_1146	COG2124	cytochrome p450
MUS_1148	COG1307	EDD domain protein, DegV family
MUS_1149	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
MUS_1153	COG0561	phosphatase activity
MUS_1154	COG1073	alpha beta
MUS_1155	COG2151	metal-sulfur cluster biosynthetic enzyme
MUS_1157	COG0277	FAD linked oxidase domain protein
MUS_1158	COG2271	Major facilitator Superfamily
MUS_1162	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
MUS_1163	COG0505	Belongs to the CarA family
MUS_1164	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
MUS_1166	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
MUS_1170	COG2267	carboxylic ester hydrolase activity
MUS_1172	COG1744	ABC transporter substrate-binding protein PnrA-like
MUS_1175	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
MUS_1176	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
MUS_1177	COG5504	Zn-dependent protease
MUS_1178	COG0444	Belongs to the ABC transporter superfamily
MUS_1179	COG4608	Belongs to the ABC transporter superfamily
MUS_1181	COG0601	transmembrane transport
MUS_1182	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUS_1186	COG4166	transmembrane transport
MUS_1187	COG0601	transmembrane transport
MUS_1188	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUS_1189	COG0444	Belongs to the ABC transporter superfamily
MUS_1190	COG4608	Belongs to the ABC transporter superfamily
MUS_1192	COG0456	acetyltransferase
MUS_1193	COG1393	Belongs to the ArsC family
MUS_1194	COG0861	Integral membrane protein TerC family
MUS_1195	COG4862	establishment of competence for transformation
MUS_1196	COG4469	Competence protein
MUS_1197	COG1164	Oligoendopeptidase f
MUS_1201	COG2346	COG2346, Truncated hemoglobins
MUS_1202	COG0741	lytic transglycosylase activity
MUS_1203	COG4116	CYTH
MUS_1205	COG2357	RelA SpoT domain protein
MUS_1206	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
MUS_1207	COG0564	pseudouridine synthase activity
MUS_1209	COG0475	glutathione-regulated potassium exporter activity
MUS_1209	COG0569	domain protein
MUS_1210	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
MUS_1211	COG0352	thiamine-phosphate diphosphorylase activity
MUS_1212	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
MUS_1213	COG2104	thiamine diphosphate biosynthetic process
MUS_1215	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
MUS_1216	COG0351	phosphomethylpyrimidine kinase
MUS_1217	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
MUS_1228	COG0210	DNA helicase
MUS_1232	COG1131	(ABC) transporter
MUS_1234	COG2153	protein acetylation
MUS_1236	COG2382	esterase
MUS_1237	COG0626	cystathionine gamma-synthase activity
MUS_1238	COG0626	cystathionine gamma-synthase activity
MUS_1239	COG0582	viral genome integration into host DNA
MUS_1261	COG1196	nuclear chromosome segregation
MUS_1261	COG0741	lytic transglycosylase activity
MUS_1261	COG0739	heme binding
MUS_1279	COG5444	nuclease activity
MUS_1284	COG0135	phosphoribosylanthranilate isomerase activity
MUS_1286	COG0346	lactoylglutathione lyase activity
MUS_1287	COG2367	Beta-lactamase
MUS_1288	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
MUS_1289	COG0477	Major facilitator Superfamily
MUS_1290	COG1846	Transcriptional regulator
MUS_1292	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
MUS_1293	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
MUS_1294	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
MUS_1295	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
MUS_1295	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
MUS_1296	COG1447	Phosphotransferase system cellobiose-specific component IIA
MUS_1303	COG1285	pathogenesis
MUS_1305	COG2205	protein histidine kinase activity
MUS_1307	COG3383	formate dehydrogenase (NAD+) activity
MUS_1308	COG2427	Protein of unknown function (DUF1641)
MUS_1309	COG2124	cytochrome p450
MUS_1310	COG1819	glycosyl
MUS_1312	COG1587	Uroporphyrinogen-III synthase
MUS_1313	COG0390	transport system, permease component
MUS_1314	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
MUS_1315	COG0697	spore germination
MUS_1316	COG4297	protein containing double-stranded beta helix domain
MUS_1319	COG1252	NADH dehydrogenase
MUS_1321	COG2211	Major facilitator Superfamily
MUS_1322	COG1609	Transcriptional regulator
MUS_1323	COG0246	Mannitol dehydrogenase
MUS_1324	COG2721	sulfolactate sulfo-lyase activity
MUS_1325	COG0730	response to heat
MUS_1326	COG2318	DinB family
MUS_1327	COG0457	Tetratricopeptide repeat
MUS_1329	COG5632	N-Acetylmuramoyl-L-alanine amidase
MUS_1329	COG3409	Peptidoglycan-binding domain 1 protein
MUS_1329	COG1388	LysM domain
MUS_1332	COG4195	phage-related replication protein
MUS_1334	COG2856	Zn peptidase
MUS_1336	COG1396	sequence-specific DNA binding
MUS_1338	COG1522	sequence-specific DNA binding
MUS_1339	COG1484	DNA-dependent DNA replication
MUS_1343	COG1595	DNA-templated transcription, initiation
MUS_1344	COG4193	domain, Protein
MUS_1351	COG5632	N-Acetylmuramoyl-L-alanine amidase
MUS_1351	COG3409	Peptidoglycan-binding domain 1 protein
MUS_1355	COG0306	phosphate transporter
MUS_1356	COG1392	Phosphate transport regulator
MUS_1358	COG0531	amino acid
MUS_1360	COG0346	lactoylglutathione lyase activity
MUS_1361	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
MUS_1362	COG0463	Glycosyl transferase, family 2
MUS_1364	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MUS_1365	COG0477	Major facilitator Superfamily
MUS_1367	COG2362	D-Aminopeptidase
MUS_1368	COG0601	transmembrane transport
MUS_1369	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUS_1370	COG0444	Belongs to the ABC transporter superfamily
MUS_1371	COG4166	transmembrane transport
MUS_1372	COG1619	proteins homologs of microcin C7 resistance protein MccF
MUS_1373	COG4948	Mandelate Racemase Muconate Lactonizing
MUS_1375	COG4948	Mandelate Racemase Muconate Lactonizing
MUS_1377	COG4608	Belongs to the ABC transporter superfamily
MUS_1378	COG2706	6-phosphogluconolactonase activity
MUS_1379	COG1834	amidinotransferase
MUS_1380	COG1607	acyl-coa hydrolase
MUS_1381	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MUS_1382	COG2076	Multidrug Resistance protein
MUS_1383	COG2076	Multidrug Resistance protein
MUS_1384	COG0788	formyltetrahydrofolate deformylase activity
MUS_1385	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
MUS_1387	COG1764	response to oxidative stress
MUS_1388	COG1846	Transcriptional regulator
MUS_1389	COG1764	response to oxidative stress
MUS_1394	COG0463	Glycosyl transferase, family 2
MUS_1394	COG0457	Tetratricopeptide repeat
MUS_1398	COG2814	Major facilitator Superfamily
MUS_1399	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MUS_1401	COG1404	Belongs to the peptidase S8 family
MUS_1403	COG1366	Belongs to the anti-sigma-factor antagonist family
MUS_1404	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
MUS_1405	COG1122	ATPase activity
MUS_1406	COG4721	ABC-type cobalt transport system, permease component
MUS_1408	COG1388	LysM domain
MUS_1408	COG3858	chitin binding
MUS_1410	COG2239	Acts as a magnesium transporter
MUS_1411	COG0789	Transcriptional regulator
MUS_1414	COG1846	Transcriptional regulator
MUS_1416	COG0726	polysaccharide deacetylase
MUS_1417	COG3285	dna ligase
MUS_1417	COG1793	dna ligase
MUS_1418	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
MUS_1420	COG0586	Pfam SNARE associated Golgi protein
MUS_1422	COG0861	Integral membrane protein TerC family
MUS_1423	COG1191	sigma factor activity
MUS_1429	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
MUS_1430	COG2323	membrane
MUS_1432	COG3594	Acyltransferase
MUS_1433	COG5002	protein histidine kinase activity
MUS_1434	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
MUS_1438	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
MUS_1439	COG0436	Aminotransferase
MUS_1446	COG3852	Histidine kinase
MUS_1448	COG1846	Transcriptional regulator
MUS_1449	COG1360	Flagellar Motor Protein
MUS_1450	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
MUS_1451	COG0542	response to heat
MUS_1454	COG3949	Membrane
MUS_1458	COG0720	synthase
MUS_1459	COG0602	queuosine metabolic process
MUS_1460	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_1462	COG4873	Protein conserved in bacteria
MUS_1464	COG3773	Cell wall hydrolase
MUS_1465	COG2244	polysaccharide biosynthetic process
MUS_1466	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUS_1467	COG2217	Heavy metal translocating P-type atpase
MUS_1468	COG0006	proline dipeptidase activity
MUS_1470	COG1609	Transcriptional regulator
MUS_1471	COG3711	transcriptional antiterminator
MUS_1472	COG2190	(PTS) system
MUS_1472	COG1263	PTS System
MUS_1472	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUS_1473	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUS_1474	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
MUS_1476	COG1533	DNA photolyase activity
MUS_1477	COG0840	transmembrane signaling receptor activity
MUS_1478	COG2084	Dehydrogenase
MUS_1480	COG2340	Cysteine-rich secretory protein family
MUS_1481	COG0768	penicillin binding
MUS_1482	COG4191	Histidine kinase
MUS_1483	COG0436	Aminotransferase
MUS_1485	COG0784	Response regulator, receiver
MUS_1485	COG0835	chemotaxis
MUS_1487	COG2814	Major facilitator Superfamily
MUS_1488	COG1376	ErfK ybiS ycfS ynhG family protein
MUS_1489	COG1408	metallophosphoesterase
MUS_1490	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_1492	COG2200	EAL domain
MUS_1494	COG4703	Protein of unknown function (DUF1797)
MUS_1495	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
MUS_1497	COG0517	IMP dehydrogenase activity
MUS_1498	COG0583	DNA-binding transcription factor activity
MUS_1500	COG0716	FMN binding
MUS_1502	COG0716	FMN binding
MUS_1506	COG0668	transmembrane transport
MUS_1507	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUS_1511	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
MUS_1512	COG0303	'Molybdopterin
MUS_1513	COG1763	Mo-molybdopterin cofactor biosynthetic process
MUS_1514	COG0314	molybdopterin synthase activity
MUS_1515	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
MUS_1518	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
MUS_1519	COG1136	(ABC) transporter
MUS_1520	COG0577	efflux transmembrane transporter activity
MUS_1521	COG1349	DNA-binding transcription factor activity
MUS_1522	COG1105	Belongs to the carbohydrate kinase PfkB family
MUS_1523	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUS_1523	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUS_1523	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUS_1525	COG0681	Belongs to the peptidase S26 family
MUS_1527	COG0488	(ABC) transporter
MUS_1528	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
MUS_1529	COG2309	aminopeptidase activity
MUS_1531	COG1077	Cell shape determining protein MreB Mrl
MUS_1533	COG2002	toxin-antitoxin pair type II binding
MUS_1534	COG3852	Histidine kinase
MUS_1535	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
MUS_1535	COG2105	PFAM AIG2 family protein
MUS_1536	COG0569	domain protein
MUS_1538	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
MUS_1540	COG0561	phosphatase activity
MUS_1541	COG0242	peptide deformylase activity
MUS_1543	COG0497	DNA recombination
MUS_1545	COG3321	synthase
MUS_1545	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_1545	COG4221	oxidoreductase activity
MUS_1545	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_1546	COG0300	oxidoreductase activity
MUS_1546	COG3321	synthase
MUS_1546	COG4221	oxidoreductase activity
MUS_1546	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUS_1547	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_1547	COG3321	synthase
MUS_1547	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_1547	COG4221	oxidoreductase activity
MUS_1548	COG4221	oxidoreductase activity
MUS_1548	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUS_1548	COG0300	oxidoreductase activity
MUS_1548	COG3321	synthase
MUS_1549	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUS_1549	COG4221	oxidoreductase activity
MUS_1549	COG3321	synthase
MUS_1549	COG0300	oxidoreductase activity
MUS_1550	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUS_1550	COG0300	oxidoreductase activity
MUS_1550	COG4221	oxidoreductase activity
MUS_1550	COG3321	synthase
MUS_1551	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_1551	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_1551	COG4221	oxidoreductase activity
MUS_1551	COG3321	synthase
MUS_1552	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
MUS_1553	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
MUS_1554	COG0022	dehydrogenase e1 component
MUS_1555	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUS_1556	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MUS_1557	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUS_1561	COG1982	Orn Lys Arg decarboxylase major
MUS_1565	COG0483	inositol monophosphate 1-phosphatase activity
MUS_1567	COG3227	Zinc metalloprotease (Elastase)
MUS_1573	COG4896	Protein conserved in bacteria
MUS_1575	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
MUS_1576	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
MUS_1577	COG2066	Belongs to the glutaminase family
MUS_1591	COG0457	Tetratricopeptide repeat
MUS_1595	COG2433	Pfam Transposase IS66
MUS_1596	COG0741	lytic transglycosylase activity
MUS_1596	COG1196	nuclear chromosome segregation
MUS_1596	COG0739	heme binding
MUS_1629	COG2066	Belongs to the glutaminase family
MUS_1631	COG0772	Belongs to the SEDS family
MUS_1632	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
MUS_1636	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
MUS_1636	COG2010	Cytochrome c
MUS_1637	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
MUS_1638	COG1845	cytochrome c oxidase, subunit III
MUS_1639	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
MUS_1640	COG3336	cytochrome c oxidase
MUS_1642	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
MUS_1643	COG2340	Cysteine-rich secretory protein family
MUS_1647	COG3679	Belongs to the UPF0342 family
MUS_1649	COG0742	ribosomal rna small subunit methyltransferase
MUS_1651	COG3314	Sporulation integral membrane protein YlbJ
MUS_1652	COG1752	Esterase of the alpha-beta hydrolase superfamily
MUS_1653	COG3480	Lon protease (S16) C-terminal proteolytic domain
MUS_1656	COG1399	metal-binding, possibly nucleic acid-binding protein
MUS_1659	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
MUS_1663	COG4839	cell division protein FtsL
MUS_1666	COG0768	penicillin binding
MUS_1670	COG0772	Belongs to the SEDS family
MUS_1673	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
MUS_1674	COG0849	cell division
MUS_1675	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
MUS_1676	COG1404	Belongs to the peptidase S8 family
MUS_1676	COG4412	M6 family metalloprotease domain protein
MUS_1678	COG1191	sigma factor activity
MUS_1679	COG1191	sigma factor activity
MUS_1680	COG1119	ATPase activity
MUS_1682	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUS_1683	COG1873	PFAM PRC-barrel domain
MUS_1685	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
MUS_1687	COG0762	integral membrane protein
MUS_1688	COG2302	S4 RNA-binding domain
MUS_1689	COG3599	regulation of cell shape
MUS_1690	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
MUS_1692	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
MUS_1694	COG0564	pseudouridine synthase activity
MUS_1696	COG2233	PERMEase
MUS_1699	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
MUS_1700	COG0505	Belongs to the CarA family
MUS_1701	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
MUS_1704	COG0284	orotidine-5'-phosphate decarboxylase activity
MUS_1705	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
MUS_1708	COG0306	phosphate transporter
MUS_1711	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
MUS_1712	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
MUS_1713	COG1648	precorrin-2 dehydrogenase activity
MUS_1716	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
MUS_1717	COG1561	YicC-like family, N-terminal region
MUS_1718	COG2052	Domain of unknown function (DUF370)
MUS_1719	COG0194	GDP metabolic process
MUS_1721	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
MUS_1722	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
MUS_1723	COG0242	peptide deformylase activity
MUS_1725	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
MUS_1725	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
MUS_1727	COG0631	protein serine/threonine phosphatase activity
MUS_1728	COG2815	serine threonine protein kinase
MUS_1728	COG0515	serine threonine protein kinase
MUS_1730	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
MUS_1731	COG1564	THIamine pyrophosphokinase
MUS_1734	COG1302	Protein conserved in bacteria
MUS_1735	COG1461	Dihydroxyacetone kinase
MUS_1736	COG1760	l-serine dehydratase
MUS_1737	COG1760	l-serine dehydratase
MUS_1738	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
MUS_1741	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
MUS_1742	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_1743	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUS_1745	COG1196	nuclear chromosome segregation
MUS_1746	COG0552	protein localization to endoplasmic reticulum
MUS_1749	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
MUS_1751	COG1837	Belongs to the UPF0109 family
MUS_1756	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
MUS_1759	COG2257	FlhB HrpN YscU SpaS Family
MUS_1761	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
MUS_1764	COG0758	DNA mediated transformation
MUS_1766	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
MUS_1768	COG4974	Belongs to the 'phage' integrase family
MUS_1772	COG1815	bacterial-type flagellum-dependent cell motility
MUS_1773	COG1558	bacterial-type flagellum-dependent cell motility
MUS_1774	COG1677	Flagellar hook-basal body complex protein FliE
MUS_1775	COG1766	The M ring may be actively involved in energy transduction
MUS_1776	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
MUS_1777	COG1317	bacterial-type flagellum organization
MUS_1778	COG1157	protein secretion by the type III secretion system
MUS_1779	COG2882	bacterial-type flagellum organization
MUS_1780	COG3334	PFAM MgtE intracellular
MUS_1781	COG3144	bacterial-type flagellum assembly
MUS_1782	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
MUS_1783	COG4786	Flagellar basal body rod
MUS_1784	COG1582	Flagellar protein (FlbD)
MUS_1785	COG1580	Controls the rotational direction of flagella during chemotaxis
MUS_1786	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
MUS_1787	COG1776	CheC inhibitor of MCP methylation
MUS_1787	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
MUS_1788	COG2201	protein-glutamate methylesterase activity
MUS_1789	COG3190	flagellar
MUS_1790	COG1338	Plays a role in the flagellum-specific transport system
MUS_1791	COG1987	bacterial-type flagellum assembly
MUS_1792	COG1684	flagellar biosynthetic protein fliR
MUS_1793	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
MUS_1794	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
MUS_1795	COG1419	protein localization to endoplasmic reticulum
MUS_1796	COG0455	bacterial-type flagellum organization
MUS_1797	COG2201	protein-glutamate methylesterase activity
MUS_1798	COG0643	Histidine kinase
MUS_1798	COG2198	Histidine kinase
MUS_1799	COG0835	chemotaxis
MUS_1800	COG1776	CheC inhibitor of MCP methylation
MUS_1802	COG1191	sigma factor activity
MUS_1808	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
MUS_1809	COG4589	Belongs to the CDS family
MUS_1811	COG0750	zinc metalloprotease
MUS_1813	COG2176	DNA-directed DNA polymerase activity
MUS_1815	COG0195	Participates in both transcription termination and antitermination
MUS_1816	COG2740	Nucleic-acid-binding protein implicated in transcription termination
MUS_1817	COG1358	cellular component organization or biogenesis
MUS_1819	COG1550	Protein conserved in bacteria
MUS_1822	COG0196	riboflavin kinase activity
MUS_1824	COG0726	polysaccharide deacetylase
MUS_1825	COG0612	Peptidase, M16
MUS_1826	COG1873	PFAM PRC-barrel domain
MUS_1827	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MUS_1828	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
MUS_1829	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
MUS_1830	COG0527	aspartate kinase activity
MUS_1832	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
MUS_1833	COG0740	serine-type endopeptidase activity
MUS_1836	COG2188	Transcriptional regulator
MUS_1837	COG2814	Major facilitator Superfamily
MUS_1838	COG1846	Transcriptional regulator
MUS_1839	COG2409	Drug exporters of the RND superfamily
MUS_1839	COG1033	growth of symbiont in host cell
MUS_1841	COG0612	Peptidase, M16
MUS_1842	COG0612	Peptidase, M16
MUS_1843	COG0300	oxidoreductase activity
MUS_1846	COG1426	Protein conserved in bacteria
MUS_1847	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
MUS_1851	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
MUS_1853	COG1692	metallophosphoesterase
MUS_1854	COG2359	stage V sporulation protein S
MUS_1858	COG4550	Control of competence regulator ComK, YlbF/YmcA
MUS_1863	COG0582	viral genome integration into host DNA
MUS_1872	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUS_1873	COG3425	synthase
MUS_1874	COG1024	Enoyl-CoA hydratase
MUS_1875	COG1024	Enoyl-CoA hydratase
MUS_1877	COG0318	PFAM AMP-dependent synthetase and ligase
MUS_1877	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_1877	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_1877	COG3321	synthase
MUS_1877	COG0300	oxidoreductase activity
MUS_1879	COG3321	synthase
MUS_1879	COG4221	oxidoreductase activity
MUS_1879	COG0300	oxidoreductase activity
MUS_1879	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUS_1883	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MUS_1883	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_1883	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MUS_1883	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUS_1883	COG3321	synthase
MUS_1883	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_1883	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_1883	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_1883	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUS_1883	COG3321	synthase
MUS_1885	COG4221	oxidoreductase activity
MUS_1885	COG3321	synthase
MUS_1885	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_1885	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_1886	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
MUS_1886	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUS_1886	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
MUS_1886	COG3321	synthase
MUS_1888	COG2124	cytochrome p450
MUS_1889	COG3209	COG3209 Rhs family protein
MUS_1891	COG3619	membrane
MUS_1893	COG1404	Belongs to the peptidase S8 family
MUS_1896	COG4195	phage-related replication protein
MUS_1897	COG1764	response to oxidative stress
MUS_1899	COG2076	Multidrug Resistance protein
MUS_1909	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MUS_1910	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MUS_1912	COG4112	unkown
MUS_1913	COG0860	N-Acetylmuramoyl-L-alanine amidase
MUS_1915	COG0464	growth
MUS_1916	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
MUS_1917	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
MUS_1918	COG0789	Transcriptional regulator
MUS_1919	COG0582	viral genome integration into host DNA
MUS_1922	COG1525	nuclease
MUS_1930	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MUS_1932	COG0457	Tetratricopeptide repeat
MUS_1937	COG5434	Belongs to the glycosyl hydrolase 28 family
MUS_1940	COG2433	Pfam Transposase IS66
MUS_1943	COG1196	nuclear chromosome segregation
MUS_1943	COG0741	lytic transglycosylase activity
MUS_1943	COG0739	heme binding
MUS_1973	COG0776	regulation of translation
MUS_2008	COG1793	dna ligase
MUS_2009	COG2135	peptidase activity
MUS_2013	COG4195	phage-related replication protein
MUS_2014	COG5434	Belongs to the glycosyl hydrolase 28 family
MUS_2014	COG3420	alginic acid biosynthetic process
MUS_2016	COG2887	Belongs to the helicase family. UvrD subfamily
MUS_2019	COG0305	Participates in initiation and elongation during chromosome replication
MUS_2020	COG0358	DNA primase activity
MUS_2021	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
MUS_2022	COG0587	DNA-directed DNA polymerase activity
MUS_2023	COG3584	3D domain protein
MUS_2026	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
MUS_2042	COG1372	Participates in initiation and elongation during chromosome replication
MUS_2042	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MUS_2044	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MUS_2045	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUS_2046	COG0756	dUTP diphosphatase activity
MUS_2050	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
MUS_2057	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
MUS_2064	COG3331	DNA recombination
MUS_2072	COG2211	Major facilitator Superfamily
MUS_2073	COG3507	Belongs to the glycosyl hydrolase 43 family
MUS_2076	COG1070	Carbohydrate kinase
MUS_2077	COG3848	Pyruvate phosphate dikinase
MUS_2077	COG0574	Belongs to the PEP-utilizing enzyme family
MUS_2079	COG2378	regulation of single-species biofilm formation
MUS_2080	COG2318	DinB family
MUS_2081	COG1064	alcohol dehydrogenase
MUS_2084	COG0456	acetyltransferase
MUS_2090	COG5444	nuclease activity
MUS_2101	COG3397	chitin binding
MUS_2102	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MUS_2107	COG5434	Belongs to the glycosyl hydrolase 28 family
MUS_2108	COG0756	dUTP diphosphatase activity
MUS_2109	COG4195	phage-related replication protein
MUS_2116	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
MUS_2118	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
MUS_2122	COG0785	Cytochrome C biogenesis protein
MUS_2123	COG2201	protein-glutamate methylesterase activity
MUS_2124	COG4846	Membrane protein involved in cytochrome C biogenesis
MUS_2126	COG0071	Belongs to the small heat shock protein (HSP20) family
MUS_2130	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
MUS_2131	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUS_2135	COG0824	Thioesterase
MUS_2137	COG4841	protein insertion into membrane
MUS_2139	COG1832	CoA-binding protein
MUS_2141	COG0187	DNA topoisomerase II activity
MUS_2142	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
MUS_2145	COG1115	amino acid carrier protein
MUS_2147	COG1063	alcohol dehydrogenase
MUS_2148	COG0800	Aldolase
MUS_2149	COG1312	Catalyzes the dehydration of D-mannonate
MUS_2150	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_2151	COG1609	Transcriptional regulator
MUS_2152	COG2271	Major facilitator Superfamily
MUS_2163	COG2205	protein histidine kinase activity
MUS_2164	COG0745	RESPONSE REGULATOR receiver
MUS_2166	COG3507	Belongs to the glycosyl hydrolase 43 family
MUS_2172	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_2173	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
MUS_2174	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
MUS_2175	COG2610	gluconate transmembrane transporter activity
MUS_2177	COG2124	cytochrome p450
MUS_2178	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
MUS_2182	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
MUS_2184	COG2246	polysaccharide biosynthetic process
MUS_2185	COG1210	Utp--glucose-1-phosphate uridylyltransferase
MUS_2186	COG0586	Pfam SNARE associated Golgi protein
MUS_2187	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
MUS_2188	COG1024	Enoyl-CoA hydratase
MUS_2189	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
MUS_2190	COG0511	ligase activity, forming carbon-carbon bonds
MUS_2191	COG0439	Biotin carboxylase
MUS_2192	COG0318	PFAM AMP-dependent synthetase and ligase
MUS_2193	COG1960	acyl-CoA dehydrogenase activity
MUS_2194	COG1649	PFAM Uncharacterised BCR, COG1649
MUS_2197	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_2197	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
MUS_2198	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_2202	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_2205	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_2210	COG2027	D-alanyl-D-alanine carboxypeptidase
MUS_2211	COG2017	converts alpha-aldose to the beta-anomer
MUS_2212	COG0534	Mate efflux family protein
MUS_2214	COG0582	viral genome integration into host DNA
MUS_2215	COG0166	Belongs to the GPI family
MUS_2216	COG0405	Gamma-glutamyltransferase
MUS_2217	COG2814	Major facilitator Superfamily
MUS_2218	COG0640	Transcriptional regulator
MUS_2219	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
MUS_2223	COG0604	alcohol dehydrogenase
MUS_2225	COG0493	'glutamate synthase
MUS_2226	COG0070	glutamate synthase
MUS_2226	COG0069	glutamate synthase activity
MUS_2226	COG0067	glutamate synthase
MUS_2227	COG0583	DNA-binding transcription factor activity
MUS_2228	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
MUS_2231	COG0300	oxidoreductase activity
MUS_2232	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
MUS_2234	COG2814	Major facilitator Superfamily
MUS_2235	COG1070	Carbohydrate kinase
MUS_2236	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
MUS_2237	COG0243	molybdopterin cofactor binding
MUS_2244	COG5444	nuclease activity
MUS_2251	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MUS_2252	COG0662	Cupin 2, conserved barrel domain protein
MUS_2252	COG2207	Transcriptional regulator
MUS_2253	COG1309	transcriptional regulator
MUS_2254	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUS_2256	COG0640	Transcriptional regulator
MUS_2257	COG0741	lytic transglycosylase activity
MUS_2259	COG2322	membrane
MUS_2263	COG1619	proteins homologs of microcin C7 resistance protein MccF
MUS_2265	COG1388	LysM domain
MUS_2265	COG3584	3D domain protein
MUS_2267	COG0514	ATP-dependent DNA helicase (RecQ)
MUS_2269	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
MUS_2270	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
MUS_2273	COG0071	Belongs to the small heat shock protein (HSP20) family
MUS_2280	COG1012	belongs to the aldehyde dehydrogenase family
MUS_2281	COG1657	PFAM Prenyltransferase squalene oxidase
MUS_2282	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
MUS_2283	COG0733	neurotransmitter:sodium symporter activity
MUS_2284	COG0385	Bile acid
MUS_2285	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUS_2286	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUS_2288	COG4548	von Willebrand factor, type A
MUS_2289	COG0714	Associated with various cellular activities
MUS_2290	COG2032	superoxide dismutase activity
MUS_2291	COG1388	LysM domain
MUS_2291	COG0791	NLP P60 protein
MUS_2293	COG1819	glycosyl
MUS_2294	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
MUS_2296	COG0534	Mate efflux family protein
MUS_2297	COG1366	Belongs to the anti-sigma-factor antagonist family
MUS_2298	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
MUS_2299	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
MUS_2301	COG2962	Rard protein
MUS_2304	COG1942	4-Oxalocrotonate Tautomerase
MUS_2306	COG1733	regulation of RNA biosynthetic process
MUS_2307	COG0778	Nitroreductase
MUS_2308	COG0400	carboxylic ester hydrolase activity
MUS_2309	COG0346	lactoylglutathione lyase activity
MUS_2311	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MUS_2314	COG2723	6-phospho-beta-galactosidase activity
MUS_2315	COG2188	Transcriptional regulator
MUS_2316	COG3409	Peptidoglycan-binding domain 1 protein
MUS_2316	COG0793	Belongs to the peptidase S41A family
MUS_2317	COG2226	methyltransferase
MUS_2319	COG1876	peptidase activity
MUS_2323	COG0671	phosphoesterase, PA-phosphatase related
MUS_2330	COG1509	lysine 2,3-aminomutase activity
MUS_2331	COG0456	acetyltransferase
MUS_2332	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUS_2333	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
MUS_2334	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
MUS_2335	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
MUS_2337	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
MUS_2339	COG0456	acetyltransferase
MUS_2340	COG0463	Glycosyl transferase, family 2
MUS_2343	COG4641	Protein conserved in bacteria
MUS_2345	COG1086	Polysaccharide biosynthesis protein
MUS_2349	COG4698	Protein conserved in bacteria
MUS_2350	COG2755	lipolytic protein G-D-S-L family
MUS_2351	COG1999	signal sequence binding
MUS_2353	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
MUS_2354	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
MUS_2355	COG1272	protein, Hemolysin III
MUS_2356	COG0204	Acyl-transferase
MUS_2357	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
MUS_2360	COG2136	Putative SAM-dependent methyltransferase
MUS_2360	COG2521	methyltransferase
MUS_2363	COG1413	lyase activity
MUS_2364	COG1418	mRNA catabolic process
MUS_2365	COG0386	Belongs to the glutathione peroxidase family
MUS_2368	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
MUS_2369	COG1278	Cold shock
MUS_2373	COG0328	RNA-DNA hybrid ribonuclease activity
MUS_2374	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
MUS_2375	COG0328	RNA-DNA hybrid ribonuclease activity
MUS_2377	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MUS_2380	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
MUS_2382	COG1755	Isoprenylcysteine carboxyl methyltransferase
MUS_2383	COG3424	synthase
MUS_2388	COG1335	isochorismatase
MUS_2398	COG4824	toxin secretion phage lysis holin
MUS_2403	COG5434	Belongs to the glycosyl hydrolase 28 family
MUS_2405	COG1705	Flagellar rod assembly protein muramidase FlgJ
MUS_2408	COG5280	Phage tail tape measure protein TP901
MUS_2408	COG3953	SLT domain
MUS_2436	COG1595	DNA-templated transcription, initiation
MUS_2441	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
MUS_2443	COG1484	DNA-dependent DNA replication
MUS_2444	COG3935	DnaD domain protein
MUS_2450	COG3646	Phage regulatory protein
MUS_2450	COG3645	SOS response
MUS_2453	COG3620	sequence-specific DNA binding
MUS_2455	COG0582	viral genome integration into host DNA
MUS_2456	COG2233	PERMEase
MUS_2458	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
MUS_2459	COG1199	ATP-dependent helicase activity
MUS_2462	COG0116	Belongs to the methyltransferase superfamily
MUS_2465	COG3359	exonuclease
MUS_2466	COG1111	helicase
MUS_2466	COG1205	dead DEAH box helicase
MUS_2467	COG2190	(PTS) system
MUS_2468	COG0071	Belongs to the small heat shock protein (HSP20) family
MUS_2476	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MUS_2476	COG4499	WXG100 protein secretion system (Wss), protein YukC
MUS_2478	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
MUS_2479	COG3935	DnaD domain protein
MUS_2481	COG0436	Aminotransferase
MUS_2482	COG5353	protein conserved in bacteria
MUS_2484	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
MUS_2484	COG1199	ATP-dependent helicase activity
MUS_2490	COG0438	transferase activity, transferring glycosyl groups
MUS_2491	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
MUS_2494	COG1694	Mazg nucleotide pyrophosphohydrolase
MUS_2495	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
MUS_2496	COG2140	Oxalate decarboxylase
MUS_2498	COG4347	Protein of unknown function (DUF1405)
MUS_2500	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
MUS_2501	COG0723	plastoquinol--plastocyanin reductase activity
MUS_2504	COG0457	Tetratricopeptide repeat
MUS_2507	COG0287	Prephenate dehydrogenase
MUS_2517	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
MUS_2518	COG4401	Chorismate mutase type I
MUS_2521	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
MUS_2522	COG0105	UTP biosynthetic process
MUS_2523	COG0142	geranyltranstransferase activity
MUS_2525	COG0142	geranyltranstransferase activity
MUS_2528	COG0776	regulation of translation
MUS_2530	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
MUS_2539	COG0539	negative regulation of cytoplasmic translation
MUS_2542	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
MUS_2543	COG2959	enzyme of heme biosynthesis
MUS_2544	COG3773	Cell wall hydrolase
MUS_2544	COG3409	Peptidoglycan-binding domain 1 protein
MUS_2545	COG2339	peptidase activity
MUS_2546	COG0492	ferredoxin-NADP+ reductase activity
MUS_2547	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
MUS_2548	COG4862	establishment of competence for transformation
MUS_2549	COG1408	metallophosphoesterase
MUS_2551	COG1388	LysM domain
MUS_2552	COG1266	CAAX protease self-immunity
MUS_2553	COG0514	ATP-dependent DNA helicase (RecQ)
MUS_2554	COG4955	Helix-turn-helix domain
MUS_2555	COG1141	Ferredoxin
MUS_2556	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
MUS_2558	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
MUS_2560	COG1595	DNA-templated transcription, initiation
MUS_2561	COG5002	protein histidine kinase activity
MUS_2562	COG0745	RESPONSE REGULATOR receiver
MUS_2563	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
MUS_2564	COG1333	cytochrome c biogenesis protein
MUS_2565	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUS_2566	COG1187	pseudouridine synthase activity
MUS_2567	COG0700	Nucleoside recognition
MUS_2568	COG2715	membrane protein required for spore maturation
MUS_2570	COG1686	Belongs to the peptidase S11 family
MUS_2574	COG1547	Domain of unknown function (DUF309)
MUS_2575	COG0456	acetyltransferase
MUS_2578	COG0307	riboflavin synthase, alpha
MUS_2579	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
MUS_2579	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
MUS_2581	COG0681	Belongs to the peptidase S26 family
MUS_2583	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
MUS_2584	COG4086	secreted protein
MUS_2585	COG0019	diaminopimelate decarboxylase activity
MUS_2586	COG0697	spore germination
MUS_2589	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
MUS_2593	COG1191	sigma factor activity
MUS_2595	COG1366	Belongs to the anti-sigma-factor antagonist family
MUS_2596	COG1686	Belongs to the peptidase S11 family
MUS_2597	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
MUS_2598	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
MUS_2599	COG4974	Belongs to the 'phage' integrase family
MUS_2601	COG0735	belongs to the Fur family
MUS_2602	COG1300	Membrane
MUS_2605	COG0281	malic enzyme
MUS_2606	COG1757	Na H antiporter
MUS_2607	COG1027	Aspartate ammonia-lyase
MUS_2608	COG0252	asparaginase activity
MUS_2609	COG1396	sequence-specific DNA binding
MUS_2610	COG1379	DNA repair
MUS_2611	COG0494	nUDIX hydrolase
MUS_2613	COG0667	Aldo Keto reductase
MUS_2615	COG1073	alpha beta
MUS_2617	COG4918	Iron-sulphur cluster biosynthesis
MUS_2618	COG0456	acetyltransferase
MUS_2618	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
MUS_2619	COG2329	Antibiotic biosynthesis monooxygenase
MUS_2620	COG0456	acetyltransferase
MUS_2621	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MUS_2625	COG0628	permease
MUS_2627	COG0346	lactoylglutathione lyase activity
MUS_2629	COG3048	D-serine ammonia-lyase activity
MUS_2630	COG0300	oxidoreductase activity
MUS_2631	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUS_2632	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
MUS_2633	COG1024	Enoyl-CoA hydratase
MUS_2634	COG3425	synthase
MUS_2635	COG2124	cytochrome p450
MUS_2636	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUS_2636	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_2636	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_2636	COG3321	synthase
MUS_2636	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MUS_2637	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_2637	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_2637	COG3321	synthase
MUS_2637	COG4221	oxidoreductase activity
MUS_2640	COG0318	PFAM AMP-dependent synthetase and ligase
MUS_2640	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_2640	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_2640	COG3321	synthase
MUS_2640	COG0300	oxidoreductase activity
MUS_2642	COG0300	oxidoreductase activity
MUS_2642	COG0318	PFAM AMP-dependent synthetase and ligase
MUS_2642	COG3321	synthase
MUS_2642	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_2642	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_2647	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_2647	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_2647	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MUS_2647	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUS_2647	COG3321	synthase
MUS_2648	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MUS_2648	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_2648	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUS_2648	COG3321	synthase
MUS_2648	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_2652	COG3321	synthase
MUS_2652	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_2652	COG0300	oxidoreductase activity
MUS_2652	COG0318	PFAM AMP-dependent synthetase and ligase
MUS_2652	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_2662	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_2664	COG0318	PFAM AMP-dependent synthetase and ligase
MUS_2667	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
MUS_2667	COG2070	2-Nitropropane dioxygenase
MUS_2669	COG0250	Participates in transcription elongation, termination and antitermination
MUS_2675	COG0596	Alpha beta hydrolase
MUS_2678	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
MUS_2679	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
MUS_2682	COG0706	membrane insertase activity
MUS_2683	COG2195	Cleaves the N-terminal amino acid of tripeptides
MUS_2685	COG0346	lactoylglutathione lyase activity
MUS_2686	COG1376	ErfK ybiS ycfS ynhG family protein
MUS_2687	COG4129	membrane
MUS_2688	COG1126	abc transporter atp-binding protein
MUS_2689	COG0765	amino acid transport
MUS_2690	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MUS_2692	COG1597	lipid kinase activity
MUS_2693	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUS_2694	COG0022	dehydrogenase e1 component
MUS_2695	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
MUS_2696	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MUS_2697	COG3426	butyrate kinase activity
MUS_2698	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
MUS_2699	COG0280	phosphate acetyltransferase
MUS_2700	COG3290	protein histidine kinase activity
MUS_2700	COG3829	transcription factor binding
MUS_2702	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
MUS_2703	COG2079	MmgE PrpD family protein
MUS_2704	COG0372	Belongs to the citrate synthase family
MUS_2705	COG1960	acyl-CoA dehydrogenase activity
MUS_2706	COG1250	3-hydroxyacyl-CoA dehydrogenase
MUS_2707	COG0183	Belongs to the thiolase family
MUS_2708	COG0584	glycerophosphoryl diester phosphodiesterase
MUS_2709	COG0860	N-Acetylmuramoyl-L-alanine amidase
MUS_2715	COG1902	pentaerythritol trinitrate reductase activity
MUS_2718	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
MUS_2719	COG0745	RESPONSE REGULATOR receiver
MUS_2720	COG0750	zinc metalloprotease
MUS_2721	COG0497	DNA recombination
MUS_2723	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
MUS_2725	COG0142	geranyltranstransferase activity
MUS_2727	COG1570	exodeoxyribonuclease VII activity
MUS_2731	COG1302	Protein conserved in bacteria
MUS_2732	COG0439	Biotin carboxylase
MUS_2733	COG0511	ligase activity, forming carbon-carbon bonds
MUS_2741	COG3854	ATPases associated with a variety of cellular activities
MUS_2744	COG0006	proline dipeptidase activity
MUS_2746	COG3872	metal-dependent enzyme
MUS_2748	COG1752	Esterase of the alpha-beta hydrolase superfamily
MUS_2751	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
MUS_2755	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
MUS_2758	COG1396	sequence-specific DNA binding
MUS_2760	COG0681	Belongs to the peptidase S26 family
MUS_2765	COG4940	Competence protein ComGF
MUS_2767	COG4970	Tfp pilus assembly protein FimT
MUS_2768	COG4537	Required for transformation and DNA binding
MUS_2769	COG1459	type II secretion system
MUS_2770	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
MUS_2771	COG0598	Magnesium transport protein CorA
MUS_2772	COG1253	flavin adenine dinucleotide binding
MUS_2773	COG1366	Belongs to the anti-sigma-factor antagonist family
MUS_2774	COG1393	Belongs to the ArsC family
MUS_2776	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUS_2778	COG0011	TIGRFAM Protein of
MUS_2780	COG2866	Carboxypeptidase
MUS_2781	COG1940	carbohydrate kinase activity
MUS_2782	COG4483	Protein conserved in bacteria
MUS_2783	COG1757	Na H antiporter
MUS_2786	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
MUS_2789	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
MUS_2791	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
MUS_2792	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
MUS_2793	COG0581	inorganic phosphate transmembrane transporter activity
MUS_2794	COG0573	inorganic phosphate transmembrane transporter activity
MUS_2795	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
MUS_2797	COG0477	Major facilitator Superfamily
MUS_2798	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
MUS_2799	COG2839	Protein conserved in bacteria
MUS_2800	COG5521	maltodextrose utilization protein MalA
MUS_2801	COG1388	LysM domain
MUS_2803	COG4709	membrane
MUS_2804	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
MUS_2805	COG0735	belongs to the Fur family
MUS_2806	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
MUS_2809	COG0513	Belongs to the DEAD box helicase family
MUS_2812	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
MUS_2813	COG2384	SAM-dependent methyltransferase
MUS_2814	COG2010	Cytochrome c
MUS_2816	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
MUS_2817	COG0358	DNA primase activity
MUS_2820	COG0517	IMP dehydrogenase activity
MUS_2821	COG0751	glycine-tRNA ligase activity
MUS_2825	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
MUS_2826	COG0295	cytidine deaminase activity
MUS_2827	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
MUS_2829	COG1480	7TM receptor with intracellular HD hydrolase
MUS_2830	COG1702	phosphate starvation-inducible protein PhoH
MUS_2831	COG0561	phosphatase activity
MUS_2834	COG4864	UPF0365 protein
MUS_2835	COG1030	water channel activity
MUS_2836	COG1610	YqeY-like protein
MUS_2837	COG1283	sodium-dependent phosphate transmembrane transporter activity
MUS_2838	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
MUS_2839	COG1385	rRNA (uridine-N3-)-methyltransferase activity
MUS_2845	COG0635	Involved in the biosynthesis of porphyrin-containing compound
MUS_2848	COG0860	N-Acetylmuramoyl-L-alanine amidase
MUS_2851	COG1466	dna polymerase III delta subunit
MUS_2853	COG0658	competence protein
MUS_2853	COG2333	competence protein COMEC
MUS_2854	COG2131	deaminase
MUS_2855	COG1555	photosystem II stabilization
MUS_2855	COG1596	polysaccharide export
MUS_2856	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
MUS_2857	COG2226	methyltransferase
MUS_2858	COG0799	negative regulation of ribosome biogenesis
MUS_2859	COG1713	HD superfamily hydrolase involved in NAD metabolism
MUS_2861	COG1534	Rna-binding protein
MUS_2862	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
MUS_2863	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
MUS_2867	COG2755	lipolytic protein G-D-S-L family
MUS_2868	COG0726	polysaccharide deacetylase
MUS_2870	COG0398	Pfam SNARE associated Golgi protein
MUS_2876	COG3708	Transcriptional regulator
MUS_2876	COG2207	Transcriptional regulator
MUS_2877	COG0583	DNA-binding transcription factor activity
MUS_2880	COG0642	Histidine kinase
MUS_2880	COG5002	protein histidine kinase activity
MUS_2881	COG0745	RESPONSE REGULATOR receiver
MUS_2882	COG2311	Membrane
MUS_2883	COG0454	-acetyltransferase
MUS_2884	COG0563	adenylate kinase activity
MUS_2886	COG2814	Major facilitator Superfamily
MUS_2887	COG0456	acetyltransferase
MUS_2888	COG2318	DinB family
MUS_2890	COG0561	phosphatase activity
MUS_2891	COG0561	phosphatase activity
MUS_2894	COG1482	cell wall glycoprotein biosynthetic process
MUS_2895	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUS_2895	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUS_2895	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUS_2896	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUS_2896	COG3711	transcriptional antiterminator
MUS_2898	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
MUS_2899	COG0583	DNA-binding transcription factor activity
MUS_2900	COG2814	Major facilitator Superfamily
MUS_2901	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
MUS_2901	COG2124	cytochrome p450
MUS_2902	COG1309	transcriptional regulator
MUS_2903	COG2226	methyltransferase
MUS_2906	COG2116	formate transmembrane transporter activity
MUS_2907	COG5609	conserved protein (DUF2294)
MUS_2908	COG3383	formate dehydrogenase (NAD+) activity
MUS_2909	COG2427	Protein of unknown function (DUF1641)
MUS_2912	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
MUS_2917	COG0768	penicillin binding
MUS_2926	COG3409	Peptidoglycan-binding domain 1 protein
MUS_2926	COG5632	N-Acetylmuramoyl-L-alanine amidase
MUS_2927	COG4824	toxin secretion phage lysis holin
MUS_2933	COG5434	Belongs to the glycosyl hydrolase 28 family
MUS_2934	COG1705	Flagellar rod assembly protein muramidase FlgJ
MUS_2938	COG5280	Phage tail tape measure protein TP901
MUS_2938	COG3953	SLT domain
MUS_2963	COG0582	viral genome integration into host DNA
MUS_2964	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
MUS_2994	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
MUS_2997	COG4472	Bacterial protein of unknown function (DUF965)
MUS_2999	COG0628	permease
MUS_3000	COG1126	abc transporter atp-binding protein
MUS_3001	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MUS_3002	COG0765	amino acid transport
MUS_3003	COG0765	amino acid transport
MUS_3006	COG3881	PFAM PRC-barrel domain
MUS_3007	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
MUS_3008	COG0457	Tetratricopeptide repeat
MUS_3011	COG1104	cysteine desulfurase activity
MUS_3012	COG1959	2 iron, 2 sulfur cluster binding
MUS_3013	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
MUS_3015	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
MUS_3021	COG4991	sh3 domain protein
MUS_3021	COG3103	Sh3 type 3 domain protein
MUS_3021	COG0860	N-Acetylmuramoyl-L-alanine amidase
MUS_3023	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
MUS_3025	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
MUS_3025	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
MUS_3026	COG5416	Lipopolysaccharide assembly protein A domain
MUS_3027	COG0490	domain, Protein
MUS_3029	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
MUS_3029	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
MUS_3031	COG2244	polysaccharide biosynthetic process
MUS_3034	COG2323	membrane
MUS_3036	COG1862	Preprotein translocase
MUS_3045	COG1388	LysM domain
MUS_3047	COG0157	Belongs to the NadC ModD family
MUS_3048	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
MUS_3049	COG1104	cysteine desulfurase activity
MUS_3050	COG1827	regulation of RNA biosynthetic process
MUS_3051	COG0077	Prephenate dehydratase
MUS_3054	COG3290	protein histidine kinase activity
MUS_3055	COG0211	Belongs to the bacterial ribosomal protein bL27 family
MUS_3056	COG2868	ribosomal protein
MUS_3058	COG1994	Peptidase M50
MUS_3059	COG0739	heme binding
MUS_3060	COG2894	cell division
MUS_3062	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
MUS_3063	COG1792	Involved in formation and maintenance of cell shape
MUS_3064	COG1077	Cell shape determining protein MreB Mrl
MUS_3068	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
MUS_3069	COG0285	dihydrofolate synthase activity
MUS_3070	COG0525	valine-tRNA ligase activity
MUS_3073	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
MUS_3074	COG1388	LysM domain
MUS_3078	COG0113	porphobilinogen synthase activity
MUS_3079	COG1587	Uroporphyrinogen-III synthase
MUS_3081	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
MUS_3085	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
MUS_3086	COG0470	DNA polymerase III
MUS_3086	COG1067	ATP-dependent peptidase activity
MUS_3090	COG0457	Tetratricopeptide repeat
MUS_3090	COG1477	protein flavinylation
MUS_3093	COG0473	3-isopropylmalate dehydrogenase activity
MUS_3096	COG0440	acetolactate synthase activity
MUS_3097	COG0028	Belongs to the TPP enzyme family
MUS_3105	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
MUS_3108	COG0622	Phosphoesterase
MUS_3109	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
MUS_3111	COG5401	PFAM Sporulation and spore germination
MUS_3113	COG1846	Transcriptional regulator
MUS_3114	COG2197	response regulator
MUS_3115	COG0824	Thioesterase
MUS_3116	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
MUS_3117	COG1053	succinate dehydrogenase
MUS_3118	COG2009	succinate dehydrogenase
MUS_3119	COG1719	4-vinyl reductase, 4VR
MUS_3120	COG0527	aspartate kinase activity
MUS_3122	COG3118	belongs to the thioredoxin family
MUS_3124	COG3534	alpha-L-arabinofuranosidase
MUS_3125	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
MUS_3126	COG2086	electron transfer activity
MUS_3127	COG1024	Enoyl-CoA hydratase
MUS_3128	COG1309	transcriptional regulator
MUS_3129	COG0318	PFAM AMP-dependent synthetase and ligase
MUS_3131	COG3766	membrane
MUS_3133	COG1796	DNA polymerase
MUS_3133	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
MUS_3134	COG1286	toxin biosynthetic process
MUS_3137	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MUS_3137	COG0072	phenylalanine-tRNA ligase activity
MUS_3138	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
MUS_3140	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MUS_3142	COG3835	regulator
MUS_3143	COG0277	FAD linked oxidase domain protein
MUS_3144	COG0247	lactate metabolic process
MUS_3145	COG1966	Carbon starvation protein
MUS_3147	COG3534	alpha-L-arabinofuranosidase
MUS_3148	COG0395	ABC-type sugar transport system, permease component
MUS_3149	COG1175	transmembrane transport
MUS_3150	COG1653	transport
MUS_3152	COG0647	UMP catabolic process
MUS_3153	COG0235	Class ii aldolase
MUS_3154	COG1069	ribulokinase activity
MUS_3155	COG2160	L-arabinose isomerase activity
MUS_3156	COG3507	Belongs to the glycosyl hydrolase 43 family
MUS_3159	COG1363	Peptidase, m42
MUS_3161	COG3326	Membrane
MUS_3163	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
MUS_3164	COG1346	cytolysis
MUS_3165	COG1380	Effector of murein hydrolase LrgA
MUS_3166	COG3279	Response regulator of the LytR AlgR family
MUS_3167	COG3275	phosphorelay sensor kinase activity
MUS_3171	COG0398	Pfam SNARE associated Golgi protein
MUS_3172	COG1484	DNA-dependent DNA replication
MUS_3173	COG3611	Membrane attachment protein
MUS_3177	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
MUS_3178	COG1733	regulation of RNA biosynthetic process
MUS_3179	COG2814	Major facilitator Superfamily
MUS_3180	COG0656	L-ascorbic acid biosynthetic process
MUS_3181	COG0237	dephospho-CoA kinase activity
MUS_3182	COG1971	Probably functions as a manganese efflux pump
MUS_3183	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
MUS_3184	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MUS_3184	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MUS_3186	COG5002	protein histidine kinase activity
MUS_3187	COG0745	RESPONSE REGULATOR receiver
MUS_3189	COG0538	isocitrate dehydrogenase activity
MUS_3190	COG0372	Belongs to the citrate synthase family
MUS_3191	COG0457	Tetratricopeptide repeat
MUS_3196	COG0628	permease
MUS_3197	COG3030	protein affecting phage T7 exclusion by the F plasmid
MUS_3198	COG0469	pyruvate kinase activity
MUS_3203	COG0281	malic enzyme
MUS_3204	COG0587	DNA-directed DNA polymerase activity
MUS_3208	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
MUS_3210	COG4109	DRTGG domain
MUS_3212	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_3216	COG0521	Mo-molybdopterin cofactor biosynthetic process
MUS_3218	COG0827	DNA restriction-modification system
MUS_3219	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
MUS_3220	COG3874	Sporulation protein YtfJ
MUS_3222	COG1714	RDD family
MUS_3223	COG0616	signal peptide processing
MUS_3224	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
MUS_3225	COG1574	metal-dependent hydrolase with the TIM-barrel fold
MUS_3226	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MUS_3229	COG1104	cysteine desulfurase activity
MUS_3230	COG1114	Component of the transport system for branched-chain amino acids
MUS_3233	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
MUS_3234	COG1309	transcriptional regulator
MUS_3235	COG1956	GAF domain-containing protein
MUS_3237	COG2203	Gaf domain
MUS_3237	COG2199	diguanylate cyclase activity
MUS_3240	COG1012	belongs to the aldehyde dehydrogenase family
MUS_3241	COG4282	regulation of fungal-type cell wall biogenesis
MUS_3248	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MUS_3248	COG1017	nitric oxide dioxygenase activity
MUS_3250	COG0693	protein deglycase activity
MUS_3253	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
MUS_3254	COG1378	Sugar-specific transcriptional regulator TrmB
MUS_3261	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MUS_3262	COG0454	-acetyltransferase
MUS_3263	COG0517	IMP dehydrogenase activity
MUS_3264	COG0123	including yeast histone deacetylase and acetoin utilization protein
MUS_3265	COG1360	Flagellar Motor Protein
MUS_3266	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
MUS_3267	COG1609	Transcriptional regulator
MUS_3268	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
MUS_3268	COG1605	Chorismate mutase
MUS_3269	COG3118	belongs to the thioredoxin family
MUS_3270	COG4980	gas vesicle protein
MUS_3271	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
MUS_3273	COG1674	ftsk spoiiie
MUS_3274	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MUS_3276	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUS_3279	COG1363	Peptidase, m42
MUS_3280	COG5584	Small secreted protein
MUS_3281	COG0281	malic enzyme
MUS_3282	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MUS_3285	COG0510	thiamine kinase activity
MUS_3286	COG1597	lipid kinase activity
MUS_3288	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
MUS_3289	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
MUS_3290	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUS_3291	COG2252	PERMEase
MUS_3292	COG4473	ABC transporter
MUS_3293	COG1131	(ABC) transporter
MUS_3295	COG1187	pseudouridine synthase activity
MUS_3296	COG2244	polysaccharide biosynthetic process
MUS_3298	COG2081	HI0933 family
MUS_3299	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MUS_3306	COG1486	melibiose metabolic process
MUS_3308	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
MUS_3312	COG1366	Belongs to the anti-sigma-factor antagonist family
MUS_3312	COG2202	Pas domain
MUS_3313	COG2814	Major facilitator Superfamily
MUS_3315	COG5522	Integral membrane protein (intg_mem_TP0381)
MUS_3317	COG0577	efflux transmembrane transporter activity
MUS_3318	COG1136	(ABC) transporter
MUS_3319	COG2205	protein histidine kinase activity
MUS_3320	COG0745	RESPONSE REGULATOR receiver
MUS_3321	COG0577	efflux transmembrane transporter activity
MUS_3322	COG1136	(ABC) transporter
MUS_3326	COG1131	(ABC) transporter
MUS_3327	COG1725	Transcriptional regulator
MUS_3331	COG1242	4 iron, 4 sulfur cluster binding
MUS_3332	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
MUS_3334	COG0584	glycerophosphoryl diester phosphodiesterase
MUS_3336	COG2267	carboxylic ester hydrolase activity
MUS_3337	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
MUS_3339	COG1113	amino acid transport
MUS_3340	COG0367	asparagine synthase
MUS_3344	COG1506	peptidase
MUS_3345	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MUS_3346	COG1116	anion transmembrane transporter activity
MUS_3347	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MUS_3348	COG0494	nUDIX hydrolase
MUS_3349	COG4824	toxin secretion phage lysis holin
MUS_3350	COG0783	Belongs to the Dps family
MUS_3355	COG0288	reversible hydration of carbon dioxide
MUS_3357	COG1271	oxidase subunit
MUS_3358	COG1294	oxidase, subunit
MUS_3360	COG1108	ABC-type Mn2 Zn2 transport systems permease components
MUS_3361	COG1321	iron dependent repressor
MUS_3361	COG1108	ABC-type Mn2 Zn2 transport systems permease components
MUS_3362	COG1121	(ABC) transporter
MUS_3363	COG0803	Belongs to the bacterial solute-binding protein 9 family
MUS_3365	COG4948	Mandelate Racemase Muconate Lactonizing
MUS_3367	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
MUS_3368	COG0596	Alpha beta hydrolase
MUS_3370	COG1169	isochorismate synthase
MUS_3371	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
MUS_3372	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
MUS_3378	COG3859	Proton-coupled thiamine transporter YuaJ
MUS_3379	COG2268	Band 7 protein
MUS_3380	COG1585	Membrane protein implicated in regulation of membrane protease activity
MUS_3381	COG2318	DinB family
MUS_3383	COG1454	alcohol dehydrogenase
MUS_3385	COG1510	regulation of RNA biosynthetic process
MUS_3387	COG0569	domain protein
MUS_3388	COG1705	Flagellar rod assembly protein muramidase FlgJ
MUS_3390	COG1017	nitric oxide dioxygenase activity
MUS_3390	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
MUS_3395	COG0628	permease
MUS_3396	COG0673	inositol 2-dehydrogenase activity
MUS_3397	COG0693	protein deglycase activity
MUS_3398	COG0840	transmembrane signaling receptor activity
MUS_3399	COG0840	transmembrane signaling receptor activity
MUS_3400	COG0840	transmembrane signaling receptor activity
MUS_3405	COG0840	transmembrane signaling receptor activity
MUS_3408	COG2070	2-Nitropropane dioxygenase
MUS_3409	COG0432	Pfam Uncharacterised protein family UPF0047
MUS_3411	COG0366	Alpha amylase catalytic
MUS_3413	COG1253	flavin adenine dinucleotide binding
MUS_3415	COG2738	Putative neutral zinc metallopeptidase
MUS_3418	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
MUS_3425	COG1335	isochorismatase
MUS_3426	COG1979	alcohol dehydrogenase
MUS_3427	COG1979	alcohol dehydrogenase
MUS_3428	COG2155	Conserved Protein
MUS_3429	COG1098	S1 RNA binding domain
MUS_3430	COG0436	Aminotransferase
MUS_3431	COG1522	sequence-specific DNA binding
MUS_3432	COG2267	carboxylic ester hydrolase activity
MUS_3434	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
MUS_3436	COG2205	protein histidine kinase activity
MUS_3438	COG5018	Exonuclease
MUS_3440	COG2814	Major facilitator Superfamily
MUS_3441	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MUS_3442	COG3011	Protein conserved in bacteria
MUS_3444	COG3290	protein histidine kinase activity
MUS_3445	COG4565	transcriptional regulatory protein
MUS_3453	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
MUS_3453	COG2111	Na H antiporter
MUS_3454	COG2111	Na H antiporter
MUS_3455	COG1006	Multisubunit Na H antiporter MnhC subunit
MUS_3456	COG0651	ATP synthesis coupled electron transport
MUS_3457	COG1863	multisubunit Na H antiporter MnhE subunit
MUS_3458	COG2212	antiporter activity
MUS_3459	COG1320	monovalent cation:proton antiporter activity
MUS_3460	COG2050	protein possibly involved in aromatic compounds catabolism
MUS_3461	COG2197	response regulator
MUS_3462	COG4585	Histidine kinase
MUS_3463	COG0142	geranyltranstransferase activity
MUS_3467	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
MUS_3468	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
MUS_3469	COG1335	isochorismatase
MUS_3470	COG5506	Protein of unknown function (DUF1694)
MUS_3473	COG0628	permease
MUS_3475	COG1418	mRNA catabolic process
MUS_3476	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_3478	COG1511	domain protein
MUS_3479	COG1674	ftsk spoiiie
MUS_3479	COG0433	COG0433 Predicted ATPase
MUS_3480	COG4499	WXG100 protein secretion system (Wss), protein YukC
MUS_3481	COG5417	Belongs to the EsaB family
MUS_3482	COG4842	Belongs to the WXG100 family
MUS_3484	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
MUS_3484	COG2508	Transcriptional regulator
MUS_3485	COG0686	Belongs to the AlaDH PNT family
MUS_3486	COG5634	Uncharacterized conserved protein (DUF2278)
MUS_3487	COG3251	PFAM MbtH domain protein
MUS_3488	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUS_3489	COG1535	isochorismatase
MUS_3489	COG3433	isochorismatase activity
MUS_3490	COG1021	2,3-dihydroxybenzoate-AMP ligase
MUS_3491	COG1169	isochorismate synthase
MUS_3492	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_3493	COG2819	hydrolase of the alpha beta superfamily
MUS_3495	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
MUS_3496	COG1268	BioY protein
MUS_3497	COG2056	Na+-H+ antiporter family
MUS_3499	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
MUS_3500	COG3584	3D domain protein
MUS_3503	COG1252	NADH dehydrogenase
MUS_3510	COG1131	(ABC) transporter
MUS_3514	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MUS_3515	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
MUS_3517	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
MUS_3520	COG1252	NADH dehydrogenase
MUS_3521	COG4837	Protein of unknown function (DUF1462)
MUS_3522	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
MUS_3523	COG4946	Tricorn protease homolog
MUS_3523	COG0823	Involved in the tonB-independent uptake of proteins
MUS_3523	COG1506	peptidase
MUS_3525	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
MUS_3526	COG0460	homoserine dehydrogenase
MUS_3527	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
MUS_3528	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
MUS_3529	COG0647	UMP catabolic process
MUS_3530	COG2445	Protein of unknown function DUF86
MUS_3532	COG4470	Protein conserved in bacteria
MUS_3534	COG0739	heme binding
MUS_3535	COG0737	Belongs to the 5'-nucleotidase family
MUS_3536	COG0730	response to heat
MUS_3537	COG1801	Protein of unknown function DUF72
MUS_3540	COG2508	Transcriptional regulator
MUS_3542	COG0457	Tetratricopeptide repeat
MUS_3545	COG2814	Major facilitator Superfamily
MUS_3546	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
MUS_3547	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUS_3548	COG2356	endonuclease I
MUS_3549	COG3842	ATPase activity
MUS_3550	COG2188	Transcriptional regulator
MUS_3551	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
MUS_3552	COG0395	ABC-type sugar transport system, permease component
MUS_3553	COG1175	transmembrane transport
MUS_3554	COG1653	transport
MUS_3555	COG2222	sugar isomerase
MUS_3556	COG0789	Transcriptional regulator
MUS_3561	COG0322	excinuclease ABC activity
MUS_3562	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
MUS_3567	COG3409	Peptidoglycan-binding domain 1 protein
MUS_3568	COG0719	Fe-S assembly protein
MUS_3569	COG0822	iron-sulfur transferase activity
MUS_3570	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
MUS_3571	COG0719	Fe-S assembly protein
MUS_3572	COG0396	ATPase activity
MUS_3574	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
MUS_3575	COG1464	Belongs to the NlpA lipoprotein family
MUS_3576	COG2011	ABC-type metal ion transport system permease component
MUS_3578	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
MUS_3580	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUS_3581	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
MUS_3584	COG1393	Belongs to the ArsC family
MUS_3585	COG1960	acyl-CoA dehydrogenase activity
MUS_3586	COG0183	Belongs to the thiolase family
MUS_3587	COG1024	Enoyl-CoA hydratase
MUS_3587	COG1250	3-hydroxyacyl-CoA dehydrogenase
MUS_3591	COG5577	PFAM Coat F domain
MUS_3592	COG1846	Transcriptional regulator
MUS_3593	COG0477	Major facilitator Superfamily
MUS_3594	COG0583	DNA-binding transcription factor activity
MUS_3598	COG1120	ATPase activity
MUS_3601	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_3602	COG0783	Belongs to the Dps family
MUS_3605	COG0745	RESPONSE REGULATOR receiver
MUS_3606	COG2770	Histidine kinase
MUS_3606	COG2205	protein histidine kinase activity
MUS_3608	COG1309	transcriptional regulator
MUS_3609	COG0114	fumarate hydratase activity
MUS_3611	COG0697	spore germination
MUS_3612	COG0814	amino acid
MUS_3614	COG2197	response regulator
MUS_3615	COG4585	Histidine kinase
MUS_3616	COG4758	membrane
MUS_3617	COG3595	metallopeptidase activity
MUS_3618	COG1842	Phage shock protein A
MUS_3619	COG4758	membrane
MUS_3620	COG2814	Major facilitator Superfamily
MUS_3621	COG2096	Adenosyltransferase
MUS_3622	COG1120	ATPase activity
MUS_3623	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUS_3624	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
MUS_3625	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_3626	COG3386	PFAM SMP-30 Gluconolaconase
MUS_3627	COG2205	protein histidine kinase activity
MUS_3628	COG0745	RESPONSE REGULATOR receiver
MUS_3631	COG1191	sigma factor activity
MUS_3634	COG2140	Oxalate decarboxylase
MUS_3636	COG1120	ATPase activity
MUS_3637	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUS_3638	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUS_3639	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
MUS_3641	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
MUS_3642	COG0531	amino acid
MUS_3644	COG1988	membrane-bound metal-dependent
MUS_3645	COG1368	sulfuric ester hydrolase activity
MUS_3646	COG1910	domain protein
MUS_3647	COG0725	ABC transporter, periplasmic molybdate-binding protein
MUS_3648	COG4149	molybdate abc transporter
MUS_3649	COG2197	response regulator
MUS_3650	COG3850	Histidine kinase
MUS_3651	COG1131	(ABC) transporter
MUS_3653	COG0842	Transport permease protein
MUS_3654	COG0656	L-ascorbic acid biosynthetic process
MUS_3659	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
MUS_3660	COG3973	AAA domain
MUS_3662	COG2860	membrane
MUS_3664	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
MUS_3665	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
MUS_3666	COG2217	Heavy metal translocating P-type atpase
MUS_3667	COG2217	Heavy metal translocating P-type atpase
MUS_3670	COG2608	mercury ion transmembrane transporter activity
MUS_3671	COG1937	Protein conserved in bacteria
MUS_3672	COG0673	inositol 2-dehydrogenase activity
MUS_3674	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUS_3675	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
MUS_3676	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUS_3677	COG1126	abc transporter atp-binding protein
MUS_3678	COG0765	amino acid transport
MUS_3679	COG0765	amino acid transport
MUS_3680	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MUS_3681	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MUS_3682	COG0454	-acetyltransferase
MUS_3683	COG0583	DNA-binding transcription factor activity
MUS_3684	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_3685	COG2732	(Barnase) inhibitor
MUS_3688	COG0557	exoribonuclease II activity
MUS_3689	COG1647	Serine aminopeptidase, S33
MUS_3690	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
MUS_3691	COG1476	TRANSCRIPTIONal
MUS_3692	COG1396	sequence-specific DNA binding
MUS_3693	COG1396	sequence-specific DNA binding
MUS_3694	COG1733	regulation of RNA biosynthetic process
MUS_3703	COG1732	Glycine betaine
MUS_3704	COG1174	glycine betaine transport
MUS_3705	COG0517	IMP dehydrogenase activity
MUS_3705	COG1125	glycine betaine transport
MUS_3707	COG1510	regulation of RNA biosynthetic process
MUS_3709	COG1174	glycine betaine transport
MUS_3710	COG1732	Glycine betaine
MUS_3711	COG1174	glycine betaine transport
MUS_3712	COG1125	glycine betaine transport
MUS_3712	COG0517	IMP dehydrogenase activity
MUS_3713	COG1510	regulation of RNA biosynthetic process
MUS_3715	COG2095	MarC family integral membrane protein
MUS_3716	COG3064	Membrane
MUS_3718	COG4640	response to antibiotic
MUS_3719	COG0456	acetyltransferase
MUS_3723	COG0126	phosphoglycerate kinase activity
MUS_3725	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
MUS_3726	COG2390	Transcriptional regulator
MUS_3727	COG2814	Major facilitator Superfamily
MUS_3728	COG1609	Transcriptional regulator
MUS_3729	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUS_3730	COG0583	DNA-binding transcription factor activity
MUS_3731	COG0697	spore germination
MUS_3732	COG1113	amino acid transport
MUS_3737	COG1737	Transcriptional regulator
MUS_3738	COG1070	Carbohydrate kinase
MUS_3744	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MUS_3745	COG2186	Transcriptional regulator
MUS_3746	COG1620	l-lactate permease
MUS_3747	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
MUS_3749	COG5039	Polysaccharide pyruvyl transferase
MUS_3751	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
MUS_3753	COG0110	maltose O-acetyltransferase activity
MUS_3754	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
MUS_3755	COG2244	polysaccharide biosynthetic process
MUS_3756	COG1216	Glycosyl transferase, family 2
MUS_3757	COG5039	Polysaccharide pyruvyl transferase
MUS_3758	COG1216	Glycosyl transferase, family 2
MUS_3760	COG0438	transferase activity, transferring glycosyl groups
MUS_3762	COG1215	transferase activity, transferring glycosyl groups
MUS_3763	COG0438	transferase activity, transferring glycosyl groups
MUS_3764	COG1086	Polysaccharide biosynthesis protein
MUS_3765	COG0489	protein tyrosine kinase activity
MUS_3766	COG3944	biosynthesis protein
MUS_3767	COG1396	sequence-specific DNA binding
MUS_3768	COG2272	Belongs to the type-B carboxylesterase lipase family
MUS_3771	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
MUS_3772	COG2364	Membrane
MUS_3773	COG0456	acetyltransferase
MUS_3774	COG3479	Phenolic acid decarboxylase
MUS_3787	COG2223	nitrite transmembrane transporter activity
MUS_3789	COG1609	Transcriptional regulator
MUS_3792	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
MUS_3794	COG0366	Alpha amylase catalytic
MUS_3795	COG1554	hydrolase, family 65, central catalytic
MUS_3796	COG5521	maltodextrose utilization protein MalA
MUS_3797	COG3833	ABC-type maltose transport systems, permease component
MUS_3798	COG1175	transmembrane transport
MUS_3800	COG2182	Extracellular solute-binding protein
MUS_3801	COG0366	Alpha amylase catalytic
MUS_3802	COG1609	Transcriptional regulator
MUS_3803	COG1611	Belongs to the LOG family
MUS_3804	COG1694	Mazg nucleotide pyrophosphohydrolase
MUS_3805	COG0659	secondary active sulfate transmembrane transporter activity
MUS_3806	COG0288	reversible hydration of carbon dioxide
MUS_3808	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MUS_3809	COG4290	ribonuclease
MUS_3810	COG2162	N-hydroxyarylamine O-acetyltransferase activity
MUS_3811	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUS_3813	COG0391	Required for morphogenesis under gluconeogenic growth conditions
MUS_3815	COG1051	belongs to the nudix hydrolase family
MUS_3817	COG0492	ferredoxin-NADP+ reductase activity
MUS_3818	COG3883	PFAM NLP P60 protein
MUS_3818	COG0791	NLP P60 protein
MUS_3820	COG0457	Tetratricopeptide repeat
MUS_3821	COG5002	protein histidine kinase activity
MUS_3822	COG0745	RESPONSE REGULATOR receiver
MUS_3824	COG1132	(ABC) transporter
MUS_3825	COG0140	phosphoribosyl-ATP diphosphatase activity
MUS_3825	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
MUS_3830	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
MUS_3833	COG4990	cell redox homeostasis
MUS_3834	COG0110	maltose O-acetyltransferase activity
MUS_3838	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
MUS_3841	COG1309	transcriptional regulator
MUS_3842	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
MUS_3843	COG1950	PFAM Membrane protein of
MUS_3844	COG1983	PspC domain protein
MUS_3845	COG3595	metallopeptidase activity
MUS_3848	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
MUS_3850	COG4897	Protein conserved in bacteria
MUS_3851	COG0574	Belongs to the PEP-utilizing enzyme family
MUS_3851	COG3848	Pyruvate phosphate dikinase
MUS_3852	COG1309	transcriptional regulator
MUS_3853	COG2814	Major facilitator Superfamily
MUS_3863	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_3864	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MUS_3866	COG0793	Belongs to the peptidase S41A family
MUS_3866	COG3409	Peptidoglycan-binding domain 1 protein
MUS_3867	COG3420	alginic acid biosynthetic process
MUS_3868	COG2177	Part of the ABC transporter FtsEX involved in
MUS_3869	COG2884	Cell division ATP-binding protein ftsE
MUS_3870	COG2010	Cytochrome c
MUS_3871	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
MUS_3872	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
MUS_3874	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
MUS_3877	COG1516	flagellar protein fliS
MUS_3878	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
MUS_3879	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
MUS_3883	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
MUS_3884	COG1256	bacterial-type flagellum assembly
MUS_3884	COG4786	Flagellar basal body rod
MUS_3885	COG3418	PFAM FlgN family protein
MUS_3886	COG2747	anti-sigma28 factor FlgM
MUS_3888	COG1040	competence protein
MUS_3890	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
MUS_3891	COG1307	EDD domain protein, DegV family
MUS_3892	COG2197	response regulator
MUS_3893	COG4585	Histidine kinase
MUS_3894	COG1739	Uncharacterized protein family UPF0029
MUS_3895	COG1316	TRANSCRIPTIONal
MUS_3896	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
MUS_3897	COG0438	transferase activity, transferring glycosyl groups
MUS_3898	COG1215	transferase activity, transferring glycosyl groups
MUS_3899	COG3206	protein involved in exopolysaccharide biosynthesis
MUS_3900	COG3307	-O-antigen
MUS_3901	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
MUS_3902	COG0297	glycogen (starch) synthase activity
MUS_3902	COG0438	transferase activity, transferring glycosyl groups
MUS_3903	COG2244	polysaccharide biosynthetic process
MUS_3905	COG0860	N-Acetylmuramoyl-L-alanine amidase
MUS_3905	COG2247	cell wall binding repeat
MUS_3906	COG2247	cell wall binding repeat
MUS_3906	COG2385	sporulation resulting in formation of a cellular spore
MUS_3908	COG1316	TRANSCRIPTIONal
MUS_3909	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
MUS_3910	COG1210	Utp--glucose-1-phosphate uridylyltransferase
MUS_3911	COG1134	teichoic acid transport
MUS_3912	COG1682	transport, permease protein
MUS_3913	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUS_3915	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
MUS_3916	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
MUS_3917	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUS_3918	COG4193	domain, Protein
MUS_3919	COG1482	cell wall glycoprotein biosynthetic process
MUS_3921	COG0697	spore germination
MUS_3922	COG0814	amino acid
MUS_3924	COG1215	transferase activity, transferring glycosyl groups
MUS_3925	COG2814	Major facilitator Superfamily
MUS_3927	COG1316	TRANSCRIPTIONal
MUS_3928	COG0561	phosphatase activity
MUS_3929	COG2433	Pfam Transposase IS66
MUS_3930	COG0791	NLP P60 protein
MUS_3933	COG2843	Capsule synthesis protein
MUS_3935	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
MUS_3939	COG0697	spore germination
MUS_3940	COG0814	amino acid
MUS_3942	COG1609	Transcriptional regulator
MUS_3943	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
MUS_3945	COG1129	ABC transporter
MUS_3946	COG1172	Belongs to the binding-protein-dependent transport system permease family
MUS_3947	COG1879	ABC-type sugar transport system periplasmic component
MUS_3949	COG3103	Sh3 type 3 domain protein
MUS_3950	COG2249	NAD(P)H dehydrogenase (quinone) activity
MUS_3951	COG3527	Alpha-acetolactate decarboxylase
MUS_3952	COG0028	Belongs to the TPP enzyme family
MUS_3953	COG0583	DNA-binding transcription factor activity
MUS_3956	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
MUS_3959	COG5337	Spore coat protein CotH
MUS_3963	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MUS_3967	COG0405	Gamma-glutamyltransferase
MUS_3968	COG1522	sequence-specific DNA binding
MUS_3970	COG2059	Chromate
MUS_3973	COG0655	NAD(P)H dehydrogenase (quinone) activity
MUS_3974	COG0583	DNA-binding transcription factor activity
MUS_3982	COG5444	nuclease activity
MUS_3986	COG3878	Protein conserved in bacteria
MUS_3987	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
MUS_3989	COG4464	protein tyrosine phosphatase activity
MUS_3990	COG0489	protein tyrosine kinase activity
MUS_3991	COG3944	biosynthesis protein
MUS_3994	COG4715	Zinc finger, swim domain protein
MUS_3995	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
MUS_3996	COG0561	phosphatase activity
MUS_3997	COG1349	DNA-binding transcription factor activity
MUS_3999	COG0629	single-stranded DNA binding
MUS_4004	COG0457	Tetratricopeptide repeat
MUS_4005	COG4786	Flagellar basal body rod
MUS_4006	COG4786	Flagellar basal body rod
MUS_4008	COG1077	Cell shape determining protein MreB Mrl
MUS_4009	COG1609	Transcriptional regulator
MUS_4010	COG1846	Transcriptional regulator
MUS_4011	COG2814	Major facilitator Superfamily
MUS_4012	COG1953	Uracil, thiamine, allantoin
MUS_4013	COG0477	Major facilitator Superfamily
MUS_4014	COG1335	isochorismatase
MUS_4016	COG0004	ammonium transporteR
MUS_4017	COG0347	Belongs to the P(II) protein family
MUS_4018	COG0772	Belongs to the SEDS family
MUS_4019	COG0671	phosphoesterase, PA-phosphatase related
MUS_4021	COG0739	heme binding
MUS_4022	COG1247	-acetyltransferase
MUS_4026	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MUS_4029	COG1959	2 iron, 2 sulfur cluster binding
MUS_4032	COG0831	urea catabolic process
MUS_4035	COG1994	Peptidase M50
MUS_4036	COG0457	Tetratricopeptide repeat
MUS_4038	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
MUS_4040	COG2304	oxidoreductase activity
MUS_4043	COG2304	oxidoreductase activity
MUS_4044	COG2385	sporulation resulting in formation of a cellular spore
MUS_4045	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
MUS_4047	COG4836	Membrane
MUS_4055	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
MUS_4064	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MUS_4067	COG0009	L-threonylcarbamoyladenylate synthase
MUS_4068	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
MUS_4076	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
MUS_4077	COG0346	lactoylglutathione lyase activity
MUS_4078	COG0789	Transcriptional regulator
MUS_4079	COG0679	Auxin Efflux Carrier
MUS_4080	COG0281	malic enzyme
MUS_4082	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
MUS_4084	COG1494	fructose-1,6-bisphosphatase
MUS_4085	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
MUS_4087	COG0191	fructose-bisphosphate aldolase activity
MUS_4088	COG2204	response regulator
MUS_4089	COG4821	SIS domain
MUS_4093	COG0247	lactate metabolic process
MUS_4093	COG2181	nitrate reductase activity
MUS_4096	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MUS_4099	COG1132	(ABC) transporter
MUS_4100	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MUS_4102	COG2181	nitrate reductase activity
MUS_4103	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
MUS_4104	COG1140	nitrate reductase beta subunit
MUS_4105	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
MUS_4106	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MUS_4108	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MUS_4109	COG2223	nitrite transmembrane transporter activity
MUS_4111	COG4506	Protein conserved in bacteria
MUS_4113	COG0457	Tetratricopeptide repeat
MUS_4119	COG0010	Belongs to the arginase family
MUS_4120	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
MUS_4121	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MUS_4124	COG1994	Peptidase M50
MUS_4125	COG1942	4-Oxalocrotonate Tautomerase
MUS_4126	COG1846	Transcriptional regulator
MUS_4127	COG0531	amino acid
MUS_4128	COG3465	dGTPase activity
MUS_4129	COG1078	dGTPase activity
MUS_4133	COG1695	Transcriptional regulator
MUS_4135	COG1131	(ABC) transporter
MUS_4136	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
MUS_4142	COG0583	DNA-binding transcription factor activity
MUS_4143	COG2855	membrane
MUS_4144	COG0280	phosphate acetyltransferase
MUS_4146	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_4147	COG0436	Aminotransferase
MUS_4153	COG2814	Major facilitator Superfamily
MUS_4154	COG2814	Major facilitator Superfamily
MUS_4156	COG0833	amino acid
MUS_4157	COG4187	Peptidase family M20/M25/M40
MUS_4158	COG1012	belongs to the aldehyde dehydrogenase family
MUS_4160	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
MUS_4161	COG2205	protein histidine kinase activity
MUS_4162	COG0745	RESPONSE REGULATOR receiver
MUS_4165	COG1131	(ABC) transporter
MUS_4166	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
MUS_4167	COG1091	dTDP-4-dehydrorhamnose reductase activity
MUS_4168	COG1088	dTDP-glucose 4,6-dehydratase activity
MUS_4169	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
MUS_4170	COG3980	spore coat polysaccharide biosynthesis protein
MUS_4171	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
MUS_4172	COG2089	acid synthase
MUS_4173	COG0456	acetyltransferase
MUS_4174	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
MUS_4175	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUS_4176	COG0463	Glycosyl transferase, family 2
MUS_4181	COG2363	Small membrane protein
MUS_4182	COG2233	PERMEase
MUS_4185	COG1216	Glycosyl transferase, family 2
MUS_4188	COG1695	Transcriptional regulator
MUS_4189	COG0351	phosphomethylpyrimidine kinase
MUS_4191	COG1621	beta-fructofuranosidase activity
MUS_4192	COG1263	PTS System
MUS_4192	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUS_4193	COG3711	transcriptional antiterminator
MUS_4195	COG1404	Belongs to the peptidase S8 family
MUS_4196	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUS_4197	COG0778	Nitroreductase
MUS_4198	COG0772	Belongs to the SEDS family
MUS_4199	COG0454	-acetyltransferase
MUS_4203	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
MUS_4204	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
MUS_4205	COG2261	transglycosylase associated protein
MUS_4206	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
MUS_4211	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
MUS_4212	COG2246	polysaccharide biosynthetic process
MUS_4213	COG1309	transcriptional regulator
MUS_4217	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
MUS_4218	COG2837	iron assimilation
MUS_4219	COG2822	iron ion transport
MUS_4222	COG0583	DNA-binding transcription factor activity
MUS_4224	COG1346	cytolysis
MUS_4225	COG4895	conserved protein (DUF2196)
MUS_4226	COG0789	Transcriptional regulator
MUS_4227	COG5504	Zn-dependent protease
MUS_4229	COG0346	lactoylglutathione lyase activity
MUS_4230	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
MUS_4231	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
MUS_4234	COG1404	Belongs to the peptidase S8 family
MUS_4235	COG1442	glycosyl transferase family 8
MUS_4238	COG1846	Transcriptional regulator
MUS_4239	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
MUS_4240	COG2357	RelA SpoT domain protein
MUS_4242	COG1575	Belongs to the MenA family. Type 1 subfamily
MUS_4245	COG1696	Membrane protein involved in D-alanine export
MUS_4247	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
MUS_4248	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
MUS_4249	COG1486	melibiose metabolic process
MUS_4250	COG1447	Phosphotransferase system cellobiose-specific component IIA
MUS_4251	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
MUS_4252	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
MUS_4253	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUS_4253	COG3711	transcriptional antiterminator
MUS_4256	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUS_4258	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUS_4260	COG0640	Transcriptional regulator
MUS_4261	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
MUS_4262	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
MUS_4263	COG1447	Phosphotransferase system cellobiose-specific component IIA
MUS_4264	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
MUS_4265	COG2723	6-phospho-beta-galactosidase activity
MUS_4266	COG1940	carbohydrate kinase activity
MUS_4267	COG1482	cell wall glycoprotein biosynthetic process
MUS_4269	COG0753	catalase activity
MUS_4270	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
MUS_4272	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
MUS_4273	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
MUS_4274	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
MUS_4275	COG4988	ABC transporter
MUS_4276	COG1294	oxidase, subunit
MUS_4277	COG1271	oxidase subunit
MUS_4279	COG3493	citrate carrier protein
MUS_4280	COG0726	polysaccharide deacetylase
MUS_4282	COG3842	ATPase activity
MUS_4283	COG2508	Transcriptional regulator
MUS_4285	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
MUS_4288	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
MUS_4292	COG4894	glucomannan catabolic process
MUS_4294	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
MUS_4296	COG0500	methyltransferase
MUS_4298	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
MUS_4302	COG0753	catalase activity
MUS_4302	COG0693	protein deglycase activity
MUS_4303	COG2851	Citrate transporter
MUS_4304	COG2273	Hydrolase Family 16
MUS_4305	COG3711	transcriptional antiterminator
MUS_4306	COG2270	Major facilitator Superfamily
MUS_4307	COG0513	Belongs to the DEAD box helicase family
MUS_4318	COG3209	COG3209 Rhs family protein
MUS_4320	COG0697	spore germination
MUS_4322	COG0589	response to stress
MUS_4324	COG0494	nUDIX hydrolase
MUS_4325	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
MUS_4326	COG3507	Belongs to the glycosyl hydrolase 43 family
MUS_4331	COG0010	Belongs to the arginase family
MUS_4332	COG0833	amino acid
MUS_4333	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
MUS_4334	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
MUS_4336	COG2390	Transcriptional regulator
MUS_4337	COG0561	phosphatase activity
MUS_4343	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
MUS_4344	COG5294	Protein conserved in bacteria
MUS_4345	COG0577	efflux transmembrane transporter activity
MUS_4346	COG1136	(ABC) transporter
MUS_4347	COG2205	protein histidine kinase activity
MUS_4348	COG0745	RESPONSE REGULATOR receiver
MUS_4349	COG2205	protein histidine kinase activity
MUS_4350	COG0745	RESPONSE REGULATOR receiver
MUS_4354	COG0745	RESPONSE REGULATOR receiver
MUS_4360	COG1082	Xylose isomerase domain protein TIM barrel
MUS_4362	COG2814	Major facilitator Superfamily
MUS_4369	COG1349	DNA-binding transcription factor activity
MUS_4370	COG0667	Aldo Keto reductase
MUS_4372	COG2814	Major facilitator Superfamily
MUS_4375	COG1028	Short-chain dehydrogenase reductase Sdr
MUS_4376	COG2197	response regulator
MUS_4377	COG4585	Histidine kinase
MUS_4378	COG3239	Fatty acid desaturase
MUS_4380	COG1309	transcriptional regulator
MUS_4381	COG1012	belongs to the aldehyde dehydrogenase family
MUS_4382	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
MUS_4384	COG0640	Transcriptional regulator
MUS_4386	COG1714	RDD family
MUS_4388	COG0450	alkyl hydroperoxide reductase
MUS_4389	COG3634	alkyl hydroperoxide reductase activity
MUS_4390	COG3177	Filamentation induced by cAMP protein fic
MUS_4391	COG1113	amino acid transport
MUS_4393	COG2080	2 iron, 2 sulfur cluster binding
MUS_4396	COG2068	MobA-Related Protein
MUS_4397	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
MUS_4408	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
MUS_4409	COG0667	Aldo Keto reductase
MUS_4410	COG0456	acetyltransferase
MUS_4412	COG0457	Tetratricopeptide repeat
MUS_4413	COG0010	Belongs to the arginase family
MUS_4414	COG0833	amino acid
MUS_4415	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
MUS_4416	COG3829	transcription factor binding
MUS_4418	COG0488	(ABC) transporter
MUS_4421	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
MUS_4422	COG3850	Histidine kinase
MUS_4422	COG5002	protein histidine kinase activity
MUS_4428	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MUS_4429	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
MUS_4430	COG4853	Protein conserved in bacteria
MUS_4431	COG4863	YycH protein
MUS_4432	COG5002	protein histidine kinase activity
MUS_4433	COG0745	RESPONSE REGULATOR receiver
MUS_4436	COG0346	lactoylglutathione lyase activity
MUS_4437	COG0305	Participates in initiation and elongation during chromosome replication
MUS_4440	COG3093	addiction module antidote protein HigA
MUS_4441	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
MUS_4442	COG0297	glycogen (starch) synthase activity
MUS_4445	COG0438	transferase activity, transferring glycosyl groups
MUS_4447	COG2112	serine threonine protein kinase
MUS_4449	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
MUS_4450	COG4241	membrane
MUS_4452	COG5577	PFAM Coat F domain
MUS_4453	COG1733	regulation of RNA biosynthetic process
MUS_4455	COG0697	spore germination
MUS_4456	COG1621	beta-fructofuranosidase activity
MUS_4457	COG1621	beta-fructofuranosidase activity
MUS_4458	COG1802	Transcriptional regulator
MUS_4459	COG2318	DinB family
MUS_4460	COG2211	Major facilitator Superfamily
MUS_4461	COG0697	spore germination
MUS_4463	COG0778	Nitroreductase
MUS_4464	COG1846	Transcriptional regulator
MUS_4465	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
MUS_4467	COG1846	Transcriptional regulator
MUS_4468	COG2153	protein acetylation
MUS_4470	COG0546	phosphoglycolate phosphatase activity
MUS_4475	COG1404	Belongs to the peptidase S8 family
MUS_4476	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MUS_4477	COG0697	spore germination
MUS_4478	COG1331	Highly conserved protein containing a thioredoxin domain
MUS_4480	COG1266	CAAX protease self-immunity
MUS_4481	COG0477	Major facilitator Superfamily
MUS_4481	COG2814	Major facilitator Superfamily
MUS_4482	COG0346	lactoylglutathione lyase activity
MUS_4483	COG1609	Transcriptional regulator
MUS_4484	COG0708	Exodeoxyribonuclease III
MUS_4486	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
MUS_4487	COG2169	Transcriptional regulator
MUS_4488	COG0629	single-stranded DNA binding
MUS_4490	COG0012	GTP binding
MUS_4491	COG0243	molybdopterin cofactor binding
MUS_4492	COG4481	Protein conserved in bacteria
MUS_4493	COG3949	Membrane
MUS_4497	COG1475	DNA binding
MUS_4498	COG1192	Involved in chromosome partitioning
MUS_4503	COG1847	R3H domain protein
MUS_4504	COG0706	membrane insertase activity