MUS_0002 SM00382 ATPases associated with a variety of cellular activities MUS_0002 SM00760 Bacterial dnaA protein helix-turn-helix domain MUS_0003 SM00480 DNA polymerase III beta subunit MUS_0007 SM00387 Histidine kinase-like ATPases MUS_0007 SM00433 TopoisomeraseII MUS_0008 SM00434 DNA Topoisomerase IV MUS_0011 SM00116 Domain in cystathionine beta-synthase and other proteins. MUS_0011 SM01240 MUS_0011 MUS_0012 SM00936 Penicillin-binding protein 5, C-terminal domain MUS_0020 SM00257 Lysin motif MUS_0020 SM00636 MUS_0020 MUS_0024 SM00382 ATPases associated with a variety of cellular activities MUS_0026 SM00493 MUS_0026 MUS_0043 SM00966 SpoVT / AbrB like domain MUS_0046 SM01208 MUS_0046 MUS_0047 SM00493 MUS_0047 MUS_0048 SM00650 Ribosomal RNA adenine dimethylases MUS_0057 SM01400 MUS_0057 MUS_0061 SM00487 DEAD-like helicases superfamily MUS_0061 SM00490 helicase superfamily c-terminal domain MUS_0061 SM00982 MUS_0061 MUS_0061 SM01058 CarD-like/TRCF domain MUS_0062 SM00966 SpoVT / AbrB like domain MUS_0065 SM00363 S4 RNA-binding domain MUS_0069 SM00316 Ribosomal protein S1-like RNA-binding domain MUS_0071 SM00331 Sigma factor PP2C-like phosphatases MUS_0071 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain MUS_0073 SM00220 Serine/Threonine protein kinases, catalytic domain MUS_0074 SM00977 TilS substrate C-terminal domain MUS_0076 SM00382 ATPases associated with a variety of cellular activities MUS_0086 SM00905 Dihydroneopterin aldolase MUS_0088 SM00530 Helix-turn-helix XRE-family like proteins MUS_0096 SM00382 ATPases associated with a variety of cellular activities MUS_0096 SM01086 C-terminal, D2-small domain, of ClpB protein MUS_0097 SM00382 ATPases associated with a variety of cellular activities MUS_0099 SM00670 Large family of predicted nucleotide-binding domains MUS_0105 SM00840 MUS_0105 MUS_0106 SM00535 Ribonuclease III family MUS_0107 SM00967 RNA 2'-O ribose methyltransferase substrate binding MUS_0112 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. MUS_0112 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. MUS_0113 SM00649 Ribosomal protein L11/L12 MUS_0119 SM00663 RNA polymerase I subunit A N-terminus MUS_0122 SM00838 Elongation factor G C-terminus MUS_0122 SM00889 Elongation factor G, domain IV MUS_0130 SM01382 MUS_0130 MUS_0130 SM01383 MUS_0130 MUS_0131 SM00322 K homology RNA-binding domain MUS_0135 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. MUS_0148 SM00662 RNA polymerases D MUS_0149 SM00382 ATPases associated with a variety of cellular activities MUS_0150 SM00382 ATPases associated with a variety of cellular activities MUS_0156 SM00646 MUS_0156 MUS_0159 SM01251 MUS_0159 MUS_0169 SM00829 Enoylreductase MUS_0176 SM00342 helix_turn_helix, arabinose operon control protein MUS_0194 SM00382 ATPases associated with a variety of cellular activities MUS_0201 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_0205 SM00421 helix_turn_helix, Lux Regulon MUS_0205 SM00448 cheY-homologous receiver domain MUS_0206 SM00382 ATPases associated with a variety of cellular activities MUS_0225 SM00530 Helix-turn-helix XRE-family like proteins MUS_0233 SM00450 Rhodanese Homology Domain MUS_0241 SM00387 Histidine kinase-like ATPases MUS_0242 SM00448 cheY-homologous receiver domain MUS_0256 SM00870 MUS_0256 MUS_0264 SM00028 Tetratricopeptide repeats MUS_0267 SM00642 Alpha-amylase domain MUS_0269 SM00382 ATPases associated with a variety of cellular activities MUS_0279 SM00116 Domain in cystathionine beta-synthase and other proteins. MUS_0279 SM00382 ATPases associated with a variety of cellular activities MUS_0286 SM00632 MUS_0286 MUS_0286 SM00642 Alpha-amylase domain MUS_0289 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_0312 SM00926 Molybdopterin oxidoreductase Fe4S4 domain MUS_0316 SM00833 Cobalamin synthesis protein cobW C-terminal domain MUS_0325 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family MUS_0329 SM00823 Phosphopantetheine attachment site MUS_0330 SM00823 Phosphopantetheine attachment site MUS_0336 SM00382 ATPases associated with a variety of cellular activities MUS_0338 SM00062 Bacterial periplasmic substrate-binding proteins MUS_0345 SM00710 Parallel beta-helix repeats MUS_0345 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses MUS_0353 SM00062 Bacterial periplasmic substrate-binding proteins MUS_0355 SM00382 ATPases associated with a variety of cellular activities MUS_0358 SM00382 ATPases associated with a variety of cellular activities MUS_0361 SM00448 cheY-homologous receiver domain MUS_0361 SM00862 Transcriptional regulatory protein, C terminal MUS_0362 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MUS_0362 SM00387 Histidine kinase-like ATPases MUS_0362 SM00388 His Kinase A (phosphoacceptor) domain MUS_0364 SM00028 Tetratricopeptide repeats MUS_0370 SM00382 ATPases associated with a variety of cellular activities MUS_0376 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor MUS_0377 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_0385 SM00420 helix_turn_helix, Deoxyribose operon repressor MUS_0400 SM00796 Allophanate hydrolase subunit 1 MUS_0401 SM00797 Allophanate hydrolase subunit 2 MUS_0402 SM00346 helix_turn_helix isocitrate lyase regulation MUS_0417 SM00344 helix_turn_helix ASNC type MUS_0418 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain MUS_0418 SM00437 Bacterial DNA topoisomerase I DNA-binding domain MUS_0418 SM00493 MUS_0418 MUS_0420 SM00267 diguanylate cyclase MUS_0447 SM00091 PAS domain MUS_0447 SM00387 Histidine kinase-like ATPases MUS_0448 SM00448 cheY-homologous receiver domain MUS_0451 SM00382 ATPases associated with a variety of cellular activities MUS_0462 SM00487 DEAD-like helicases superfamily MUS_0462 SM00490 helicase superfamily c-terminal domain MUS_0468 SM01005 Alanine racemase, C-terminal domain MUS_0473 SM00331 Sigma factor PP2C-like phosphatases MUS_0477 SM00331 Sigma factor PP2C-like phosphatases MUS_0477 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain MUS_0478 SM00316 Ribosomal protein S1-like RNA-binding domain MUS_0478 SM00732 Likely ribonuclease with RNase H fold. MUS_0480 SM00731 SprT homologues. MUS_0495 SM00357 Cold shock protein domain MUS_0498 SM00450 Rhodanese Homology Domain MUS_0499 SM00450 Rhodanese Homology Domain MUS_0500 SM00450 Rhodanese Homology Domain MUS_0500 SM00849 Metallo-beta-lactamase superfamily MUS_0509 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_0509 SM00895 MUS_0509 MUS_0513 SM00342 helix_turn_helix, arabinose operon control protein MUS_0515 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_0537 SM00829 Enoylreductase MUS_0538 SM00422 helix_turn_helix, mercury resistance MUS_0542 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_0551 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_0559 SM01266 MUS_0559 MUS_0561 SM00387 Histidine kinase-like ATPases MUS_0562 SM00421 helix_turn_helix, Lux Regulon MUS_0562 SM00448 cheY-homologous receiver domain MUS_0565 SM00382 ATPases associated with a variety of cellular activities MUS_0570 SM00825 Beta-ketoacyl synthase MUS_0571 SM00530 Helix-turn-helix XRE-family like proteins MUS_0574 SM00422 helix_turn_helix, mercury resistance MUS_0579 SM01329 MUS_0579 MUS_0580 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_0580 SM00895 MUS_0580 MUS_0590 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_0590 SM00866 MUS_0590 MUS_0591 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_0591 SM00895 MUS_0591 MUS_0599 SM00829 Enoylreductase MUS_0608 SM00382 ATPases associated with a variety of cellular activities MUS_0610 SM00881 CoA binding domain MUS_0615 SM00883 Chaperonin 10 Kd subunit MUS_0618 SM00028 Tetratricopeptide repeats MUS_0618 SM00382 ATPases associated with a variety of cellular activities MUS_0619 SM00829 Enoylreductase MUS_0631 SM00829 Enoylreductase MUS_0642 SM00460 Transglutaminase/protease-like homologues MUS_0645 SM01209 MUS_0645 MUS_0658 SM01001 AIR carboxylase MUS_0660 SM00998 Adenylosuccinate lyase C-terminus MUS_0663 SM01211 MUS_0663 MUS_0668 SM00798 AICARFT/IMPCHase bienzyme MUS_0668 SM00851 MGS-like domain MUS_0669 SM01209 MUS_0669 MUS_0669 SM01210 MUS_0669 MUS_0679 SM00278 Helix-hairpin-helix DNA-binding motif class 1 MUS_0679 SM00292 breast cancer carboxy-terminal domain MUS_0679 SM00532 Ligase N family MUS_0686 SM00845 GatB domain MUS_0689 SM00046 Diacylglycerol kinase catalytic domain (presumed) MUS_0691 SM00382 ATPases associated with a variety of cellular activities MUS_0693 SM00382 ATPases associated with a variety of cellular activities MUS_0723 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_0731 SM00382 ATPases associated with a variety of cellular activities MUS_0744 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MUS_0747 SM00382 ATPases associated with a variety of cellular activities MUS_0748 SM00422 helix_turn_helix, mercury resistance MUS_0750 SM00382 ATPases associated with a variety of cellular activities MUS_0751 SM00487 DEAD-like helicases superfamily MUS_0751 SM00490 helicase superfamily c-terminal domain MUS_0755 SM00829 Enoylreductase MUS_0758 SM00656 MUS_0758 MUS_0763 SM00387 Histidine kinase-like ATPases MUS_0763 SM00388 His Kinase A (phosphoacceptor) domain MUS_0763 SM00448 cheY-homologous receiver domain MUS_0764 SM00448 cheY-homologous receiver domain MUS_0764 SM00862 Transcriptional regulatory protein, C terminal MUS_0772 SM00387 Histidine kinase-like ATPases MUS_0775 SM00448 cheY-homologous receiver domain MUS_0778 SM00849 Metallo-beta-lactamase superfamily MUS_0794 SM00642 Alpha-amylase domain MUS_0795 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_0795 SM00866 MUS_0795 MUS_0801 SM00354 helix_turn _helix lactose operon repressor MUS_0806 SM00226 Low molecular weight phosphatase family MUS_0818 SM00382 ATPases associated with a variety of cellular activities MUS_0821 SM00014 Acid phosphatase homologues MUS_0822 SM00448 cheY-homologous receiver domain MUS_0822 SM00862 Transcriptional regulatory protein, C terminal MUS_0823 SM00387 Histidine kinase-like ATPases MUS_0823 SM00388 His Kinase A (phosphoacceptor) domain MUS_0827 SM00478 endonuclease III MUS_0836 SM00861 Transketolase, pyrimidine binding domain MUS_0839 SM00382 ATPases associated with a variety of cellular activities MUS_0844 SM00382 ATPases associated with a variety of cellular activities MUS_0845 SM00382 ATPases associated with a variety of cellular activities MUS_0864 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_0878 SM00287 Bacterial SH3 domain homologues MUS_0885 SM00478 endonuclease III MUS_0885 SM00525 MUS_0885 MUS_0891 SM00382 ATPases associated with a variety of cellular activities MUS_0909 SM00382 ATPases associated with a variety of cellular activities MUS_0910 SM00382 ATPases associated with a variety of cellular activities MUS_0911 SM01060 MUS_0911 MUS_0914 SM00382 ATPases associated with a variety of cellular activities MUS_0915 SM00062 Bacterial periplasmic substrate-binding proteins MUS_0922 SM00530 Helix-turn-helix XRE-family like proteins MUS_0924 SM00567 E-Z type HEAT repeats MUS_0931 SM00763 PrkA AAA domain MUS_0935 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_0941 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_0942 SM00382 ATPases associated with a variety of cellular activities MUS_0943 SM00382 ATPases associated with a variety of cellular activities MUS_0945 SM00357 Cold shock protein domain MUS_0947 SM00267 diguanylate cyclase MUS_0960 SM00116 Domain in cystathionine beta-synthase and other proteins. MUS_0970 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. MUS_0970 SM00387 Histidine kinase-like ATPases MUS_0971 SM00421 helix_turn_helix, Lux Regulon MUS_0971 SM00448 cheY-homologous receiver domain MUS_0975 SM00257 Lysin motif MUS_0980 SM00098 Alkaline phosphatase homologues MUS_0981 SM00257 Lysin motif MUS_0990 SM00563 Phosphate acyltransferases MUS_0991 SM01091 Transporter associated domain MUS_0995 SM00825 Beta-ketoacyl synthase MUS_0997 SM01091 Transporter associated domain MUS_1011 SM00382 ATPases associated with a variety of cellular activities MUS_1014 SM00382 ATPases associated with a variety of cellular activities MUS_1024 SM00729 Elongator protein 3, MiaB family, Radical SAM MUS_1031 SM00382 ATPases associated with a variety of cellular activities MUS_1039 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MUS_1047 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_1053 SM00382 ATPases associated with a variety of cellular activities MUS_1075 SM00849 Metallo-beta-lactamase superfamily MUS_1085 SM00855 Phosphoglycerate mutase family MUS_1089 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MUS_1092 SM00914 MUS_1092 MUS_1097 SM00894 Excalibur calcium-binding domain MUS_1105 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_1130 SM00342 helix_turn_helix, arabinose operon control protein MUS_1131 SM00354 helix_turn _helix lactose operon repressor MUS_1136 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_1142 SM00316 Ribosomal protein S1-like RNA-binding domain MUS_1145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MUS_1145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MUS_1159 SM00859 Semialdehyde dehydrogenase, NAD binding domain MUS_1163 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain MUS_1164 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MUS_1176 SM00825 Beta-ketoacyl synthase MUS_1178 SM00382 ATPases associated with a variety of cellular activities MUS_1179 SM00382 ATPases associated with a variety of cellular activities MUS_1189 SM00382 ATPases associated with a variety of cellular activities MUS_1190 SM00382 ATPases associated with a variety of cellular activities MUS_1203 SM01118 MUS_1203 MUS_1205 SM00954 Region found in RelA / SpoT proteins MUS_1230 SM00849 Metallo-beta-lactamase superfamily MUS_1232 SM00382 ATPases associated with a variety of cellular activities MUS_1233 SM00966 SpoVT / AbrB like domain MUS_1240 SM00530 Helix-turn-helix XRE-family like proteins MUS_1290 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_1298 SM00420 helix_turn_helix, Deoxyribose operon repressor MUS_1298 SM01134 MUS_1298 MUS_1302 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_1307 SM00926 Molybdopterin oxidoreductase Fe4S4 domain MUS_1307 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MUS_1314 SM00382 ATPases associated with a variety of cellular activities MUS_1322 SM00354 helix_turn _helix lactose operon repressor MUS_1324 SM00858 MUS_1324 MUS_1327 SM00028 Tetratricopeptide repeats MUS_1329 SM00257 Lysin motif MUS_1329 SM00644 MUS_1329 MUS_1336 SM00530 Helix-turn-helix XRE-family like proteins MUS_1339 SM00382 ATPases associated with a variety of cellular activities MUS_1351 SM00257 Lysin motif MUS_1351 SM00644 MUS_1351 MUS_1364 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MUS_1370 SM00382 ATPases associated with a variety of cellular activities MUS_1373 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain MUS_1375 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain MUS_1377 SM00382 ATPases associated with a variety of cellular activities MUS_1385 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase MUS_1388 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_1394 SM00028 Tetratricopeptide repeats MUS_1399 SM00100 Cyclic nucleotide-monophosphate binding domain MUS_1405 SM00382 ATPases associated with a variety of cellular activities MUS_1408 SM00257 Lysin motif MUS_1408 SM00636 MUS_1408 MUS_1410 SM00116 Domain in cystathionine beta-synthase and other proteins. MUS_1410 SM00924 MgtE intracellular N domain MUS_1411 SM00422 helix_turn_helix, mercury resistance MUS_1414 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_1418 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen MUS_1433 SM00091 PAS domain MUS_1433 SM00387 Histidine kinase-like ATPases MUS_1433 SM00388 His Kinase A (phosphoacceptor) domain MUS_1442 SM01007 Class II Aldolase and Adducin N-terminal domain MUS_1446 SM00387 Histidine kinase-like ATPases MUS_1446 SM00388 His Kinase A (phosphoacceptor) domain MUS_1448 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_1451 SM00382 ATPases associated with a variety of cellular activities MUS_1451 SM01086 C-terminal, D2-small domain, of ClpB protein MUS_1460 SM00822 MUS_1460 MUS_1470 SM00354 helix_turn _helix lactose operon repressor MUS_1471 SM01061 CAT RNA binding domain MUS_1477 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MUS_1477 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MUS_1482 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MUS_1482 SM00091 PAS domain MUS_1482 SM00387 Histidine kinase-like ATPases MUS_1482 SM00388 His Kinase A (phosphoacceptor) domain MUS_1485 SM00260 Two component signalling adaptor domain MUS_1485 SM00448 cheY-homologous receiver domain MUS_1488 SM00257 Lysin motif MUS_1492 SM00052 Putative diguanylate phosphodiesterase MUS_1512 SM00852 Probable molybdopterin binding domain MUS_1519 SM00382 ATPases associated with a variety of cellular activities MUS_1521 SM00420 helix_turn_helix, Deoxyribose operon repressor MUS_1521 SM01134 MUS_1521 MUS_1527 SM00382 ATPases associated with a variety of cellular activities MUS_1533 SM00966 SpoVT / AbrB like domain MUS_1534 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MUS_1534 SM00091 PAS domain MUS_1534 SM00387 Histidine kinase-like ATPases MUS_1534 SM00388 His Kinase A (phosphoacceptor) domain MUS_1538 SM00849 Metallo-beta-lactamase superfamily MUS_1544 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. MUS_1545 SM00822 MUS_1545 MUS_1545 SM00823 Phosphopantetheine attachment site MUS_1545 SM00825 Beta-ketoacyl synthase MUS_1545 SM00826 MUS_1545 MUS_1545 SM01294 MUS_1545 MUS_1546 SM00822 MUS_1546 MUS_1546 SM00823 Phosphopantetheine attachment site MUS_1546 SM00825 Beta-ketoacyl synthase MUS_1546 SM00826 MUS_1546 MUS_1547 SM00822 MUS_1547 MUS_1547 SM00823 Phosphopantetheine attachment site MUS_1547 SM00825 Beta-ketoacyl synthase MUS_1547 SM01294 MUS_1547 MUS_1548 SM00822 MUS_1548 MUS_1548 SM00823 Phosphopantetheine attachment site MUS_1548 SM00825 Beta-ketoacyl synthase MUS_1548 SM01294 MUS_1548 MUS_1549 SM00822 MUS_1549 MUS_1549 SM00823 Phosphopantetheine attachment site MUS_1549 SM00825 Beta-ketoacyl synthase MUS_1549 SM01294 MUS_1549 MUS_1550 SM00822 MUS_1550 MUS_1550 SM00823 Phosphopantetheine attachment site MUS_1550 SM00825 Beta-ketoacyl synthase MUS_1550 SM01294 MUS_1550 MUS_1551 SM00822 MUS_1551 MUS_1551 SM00823 Phosphopantetheine attachment site MUS_1551 SM01294 MUS_1551 MUS_1554 SM00861 Transketolase, pyrimidine binding domain MUS_1571 SM00838 Elongation factor G C-terminus MUS_1575 SM00670 Large family of predicted nucleotide-binding domains MUS_1591 SM00028 Tetratricopeptide repeats MUS_1601 SM00465 GIY-YIG type nucleases (URI domain) MUS_1628 SM00857 Resolvase, N terminal domain MUS_1632 SM00878 Biotin carboxylase C-terminal domain MUS_1642 SM00116 Domain in cystathionine beta-synthase and other proteins. MUS_1664 SM00740 MUS_1664 MUS_1666 SM00740 MUS_1666 MUS_1674 SM00842 Cell division protein FtsA MUS_1675 SM00864 Tubulin/FtsZ family, GTPase domain MUS_1675 SM00865 Tubulin/FtsZ family, C-terminal domain MUS_1680 SM00382 ATPases associated with a variety of cellular activities MUS_1688 SM00363 S4 RNA-binding domain MUS_1694 SM00363 S4 RNA-binding domain MUS_1700 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain MUS_1701 SM00851 MGS-like domain MUS_1701 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MUS_1701 SM01209 MUS_1701 MUS_1704 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family MUS_1716 SM00831 Cation transporter/ATPase, N-terminus MUS_1719 SM00072 Guanylate kinase homologues. MUS_1720 SM01409 MUS_1720 MUS_1722 SM00487 DEAD-like helicases superfamily MUS_1722 SM00490 helicase superfamily c-terminal domain MUS_1727 SM00331 Sigma factor PP2C-like phosphatases MUS_1727 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain MUS_1728 SM00220 Serine/Threonine protein kinases, catalytic domain MUS_1728 SM00740 MUS_1728 MUS_1731 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain MUS_1735 SM01120 MUS_1735 MUS_1735 SM01121 MUS_1735 MUS_1738 SM00487 DEAD-like helicases superfamily MUS_1738 SM00490 helicase superfamily c-terminal domain MUS_1741 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. MUS_1742 SM00822 MUS_1742 MUS_1744 SM00358 Double-stranded RNA binding motif MUS_1744 SM00535 Ribonuclease III family MUS_1745 SM00968 SMC proteins Flexible Hinge Domain MUS_1746 SM00382 ATPases associated with a variety of cellular activities MUS_1746 SM00962 SRP54-type protein, GTPase domain MUS_1746 SM00963 SRP54-type protein, helical bundle domain MUS_1749 SM00382 ATPases associated with a variety of cellular activities MUS_1749 SM00962 SRP54-type protein, GTPase domain MUS_1749 SM00963 SRP54-type protein, helical bundle domain MUS_1761 SM00881 CoA binding domain MUS_1766 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain MUS_1766 SM00437 Bacterial DNA topoisomerase I DNA-binding domain MUS_1766 SM00493 MUS_1766 MUS_1770 SM00382 ATPases associated with a variety of cellular activities MUS_1770 SM01086 C-terminal, D2-small domain, of ClpB protein MUS_1778 SM00382 ATPases associated with a variety of cellular activities MUS_1788 SM00448 cheY-homologous receiver domain MUS_1795 SM00962 SRP54-type protein, GTPase domain MUS_1797 SM00448 cheY-homologous receiver domain MUS_1798 SM00073 Histidine Phosphotransfer domain MUS_1798 SM00260 Two component signalling adaptor domain MUS_1798 SM00387 Histidine kinase-like ATPases MUS_1798 SM01231 MUS_1798 MUS_1799 SM00260 Two component signalling adaptor domain MUS_1811 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MUS_1813 SM00479 MUS_1813 MUS_1813 SM00481 DNA polymerase alpha chain like domain MUS_1815 SM00316 Ribosomal protein S1-like RNA-binding domain MUS_1815 SM00322 K homology RNA-binding domain MUS_1822 SM00904 Riboflavin kinase MUS_1823 SM00316 Ribosomal protein S1-like RNA-binding domain MUS_1823 SM00322 K homology RNA-binding domain MUS_1829 SM00859 Semialdehyde dehydrogenase, NAD binding domain MUS_1831 SM01130 MUS_1831 MUS_1832 SM00849 Metallo-beta-lactamase superfamily MUS_1836 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_1836 SM00866 MUS_1836 MUS_1838 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_1846 SM00530 Helix-turn-helix XRE-family like proteins MUS_1848 SM00852 Probable molybdopterin binding domain MUS_1849 SM00382 ATPases associated with a variety of cellular activities MUS_1852 SM00322 K homology RNA-binding domain MUS_1852 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MUS_1855 SM00829 Enoylreductase MUS_1857 SM00729 Elongator protein 3, MiaB family, Radical SAM MUS_1860 SM00533 DNA-binding domain of DNA mismatch repair MUTS family MUS_1860 SM00534 ATPase domain of DNA mismatch repair MUTS family MUS_1861 SM00853 MutL C terminal dimerisation domain MUS_1861 SM01340 MUS_1861 MUS_1868 SM00849 Metallo-beta-lactamase superfamily MUS_1869 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. MUS_1870 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. MUS_1871 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. MUS_1877 SM00822 MUS_1877 MUS_1877 SM00823 Phosphopantetheine attachment site MUS_1877 SM00825 Beta-ketoacyl synthase MUS_1877 SM01294 MUS_1877 MUS_1879 SM00822 MUS_1879 MUS_1879 SM00823 Phosphopantetheine attachment site MUS_1879 SM00825 Beta-ketoacyl synthase MUS_1879 SM00826 MUS_1879 MUS_1879 SM01294 MUS_1879 MUS_1883 SM00822 MUS_1883 MUS_1883 SM00823 Phosphopantetheine attachment site MUS_1883 SM00825 Beta-ketoacyl synthase MUS_1883 SM00826 MUS_1883 MUS_1883 SM01294 MUS_1883 MUS_1885 SM00822 MUS_1885 MUS_1885 SM00823 Phosphopantetheine attachment site MUS_1885 SM00825 Beta-ketoacyl synthase MUS_1885 SM00826 MUS_1885 MUS_1885 SM01294 MUS_1885 MUS_1886 SM00823 Phosphopantetheine attachment site MUS_1886 SM00825 Beta-ketoacyl synthase MUS_1886 SM01294 MUS_1886 MUS_1913 SM00646 MUS_1913 MUS_1915 SM00382 ATPases associated with a variety of cellular activities MUS_1918 SM00422 helix_turn_helix, mercury resistance MUS_1922 SM00318 Staphylococcal nuclease homologues MUS_1922 SM00894 Excalibur calcium-binding domain MUS_1932 SM00028 Tetratricopeptide repeats MUS_1937 SM00710 Parallel beta-helix repeats MUS_1973 SM00411 bacterial (prokaryotic) histone like domain MUS_1977 SM00864 Tubulin/FtsZ family, GTPase domain MUS_1978 SM00465 GIY-YIG type nucleases (URI domain) MUS_2014 SM00710 Parallel beta-helix repeats MUS_2022 SM00481 DNA polymerase alpha chain like domain MUS_2081 SM00829 Enoylreductase MUS_2091 SM00860 SMI1 / KNR4 family MUS_2092 SM00860 SMI1 / KNR4 family MUS_2107 SM00710 Parallel beta-helix repeats MUS_2115 SM00257 Lysin motif MUS_2116 SM00857 Resolvase, N terminal domain MUS_2118 SM00861 Transketolase, pyrimidine binding domain MUS_2123 SM00448 cheY-homologous receiver domain MUS_2138 SM01207 MUS_2138 MUS_2139 SM00881 CoA binding domain MUS_2141 SM00387 Histidine kinase-like ATPases MUS_2141 SM00433 TopoisomeraseII MUS_2142 SM00434 DNA Topoisomerase IV MUS_2147 SM00829 Enoylreductase MUS_2151 SM00354 helix_turn _helix lactose operon repressor MUS_2161 SM01067 Cellulose binding domain MUS_2163 SM00387 Histidine kinase-like ATPases MUS_2163 SM00388 His Kinase A (phosphoacceptor) domain MUS_2164 SM00448 cheY-homologous receiver domain MUS_2164 SM00862 Transcriptional regulatory protein, C terminal MUS_2166 SM00606 Cellulose Binding Domain Type IV MUS_2168 SM00823 Phosphopantetheine attachment site MUS_2168 SM00824 Thioesterase MUS_2169 SM00823 Phosphopantetheine attachment site MUS_2170 SM00823 Phosphopantetheine attachment site MUS_2170 SM00825 Beta-ketoacyl synthase MUS_2171 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. MUS_2172 SM00822 MUS_2172 MUS_2173 SM00882 Coenzyme A transferase MUS_2174 SM00882 Coenzyme A transferase MUS_2178 SM00729 Elongator protein 3, MiaB family, Radical SAM MUS_2178 SM00876 Biotin and Thiamin Synthesis associated domain MUS_2191 SM00878 Biotin carboxylase C-terminal domain MUS_2197 SM00824 Thioesterase MUS_2198 SM00823 Phosphopantetheine attachment site MUS_2202 SM00823 Phosphopantetheine attachment site MUS_2205 SM00823 Phosphopantetheine attachment site MUS_2205 SM01294 MUS_2205 MUS_2218 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor MUS_2219 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain MUS_2223 SM00829 Enoylreductase MUS_2228 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase MUS_2231 SM00822 MUS_2231 MUS_2243 SM00860 SMI1 / KNR4 family MUS_2252 SM00342 helix_turn_helix, arabinose operon control protein MUS_2254 SM00849 Metallo-beta-lactamase superfamily MUS_2256 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor MUS_2265 SM00257 Lysin motif MUS_2267 SM00341 Helicase and RNase D C-terminal MUS_2267 SM00487 DEAD-like helicases superfamily MUS_2267 SM00490 helicase superfamily c-terminal domain MUS_2267 SM00956 MUS_2267 MUS_2285 SM00849 Metallo-beta-lactamase superfamily MUS_2287 SM00861 Transketolase, pyrimidine binding domain MUS_2288 SM00327 von Willebrand factor (vWF) type A domain MUS_2289 SM00382 ATPases associated with a variety of cellular activities MUS_2291 SM00257 Lysin motif MUS_2315 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_2315 SM00866 MUS_2315 MUS_2316 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MUS_2316 SM00245 tail specific protease MUS_2323 SM00014 Acid phosphatase homologues MUS_2333 SM00882 Coenzyme A transferase MUS_2334 SM00882 Coenzyme A transferase MUS_2337 SM00871 Bacterial transcription activator, effector binding domain MUS_2354 SM00382 ATPases associated with a variety of cellular activities MUS_2363 SM00567 E-Z type HEAT repeats MUS_2363 SM00932 Scaffold protein Nfu/NifU N terminal MUS_2364 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MUS_2369 SM00357 Cold shock protein domain MUS_2377 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs MUS_2377 SM00475 5'-3' exonuclease MUS_2397 SM00644 MUS_2397 MUS_2403 SM00710 Parallel beta-helix repeats MUS_2405 SM00047 Lysozyme subfamily 2 MUS_2443 SM00382 ATPases associated with a variety of cellular activities MUS_2452 SM00530 Helix-turn-helix XRE-family like proteins MUS_2453 SM00530 Helix-turn-helix XRE-family like proteins MUS_2459 SM00491 MUS_2459 MUS_2462 SM00981 MUS_2462 MUS_2466 SM00487 DEAD-like helicases superfamily MUS_2466 SM00490 helicase superfamily c-terminal domain MUS_2476 SM00060 Fibronectin type 3 domain MUS_2478 SM00478 endonuclease III MUS_2478 SM00525 MUS_2478 MUS_2484 SM00479 MUS_2484 MUS_2484 SM00487 DEAD-like helicases superfamily MUS_2484 SM00491 MUS_2484 MUS_2492 SM00851 MGS-like domain MUS_2496 SM00835 Cupin MUS_2503 SM00914 MUS_2503 MUS_2504 SM00028 Tetratricopeptide repeats MUS_2521 SM00138 Methyltransferase, chemotaxis proteins MUS_2522 SM00562 MUS_2522 MUS_2528 SM00411 bacterial (prokaryotic) histone like domain MUS_2539 SM00316 Ribosomal protein S1-like RNA-binding domain MUS_2547 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MUS_2551 SM00257 Lysin motif MUS_2553 SM00487 DEAD-like helicases superfamily MUS_2553 SM00490 helicase superfamily c-terminal domain MUS_2561 SM00091 PAS domain MUS_2561 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MUS_2561 SM00387 Histidine kinase-like ATPases MUS_2561 SM00388 His Kinase A (phosphoacceptor) domain MUS_2562 SM00448 cheY-homologous receiver domain MUS_2562 SM00862 Transcriptional regulatory protein, C terminal MUS_2566 SM00363 S4 RNA-binding domain MUS_2594 SM00387 Histidine kinase-like ATPases MUS_2596 SM00936 Penicillin-binding protein 5, C-terminal domain MUS_2605 SM00919 Malic enzyme, NAD binding domain MUS_2605 SM01274 MUS_2605 MUS_2608 SM00870 MUS_2608 MUS_2609 SM00530 Helix-turn-helix XRE-family like proteins MUS_2631 SM00849 Metallo-beta-lactamase superfamily MUS_2636 SM00823 Phosphopantetheine attachment site MUS_2636 SM00825 Beta-ketoacyl synthase MUS_2636 SM00829 Enoylreductase MUS_2636 SM01294 MUS_2636 MUS_2637 SM00822 MUS_2637 MUS_2637 SM00825 Beta-ketoacyl synthase MUS_2637 SM00826 MUS_2637 MUS_2640 SM00822 MUS_2640 MUS_2640 SM00823 Phosphopantetheine attachment site MUS_2640 SM00825 Beta-ketoacyl synthase MUS_2640 SM01294 MUS_2640 MUS_2642 SM00822 MUS_2642 MUS_2642 SM00823 Phosphopantetheine attachment site MUS_2642 SM00825 Beta-ketoacyl synthase MUS_2642 SM01294 MUS_2642 MUS_2647 SM00822 MUS_2647 MUS_2647 SM00823 Phosphopantetheine attachment site MUS_2647 SM00825 Beta-ketoacyl synthase MUS_2647 SM00826 MUS_2647 MUS_2648 SM00822 MUS_2648 MUS_2652 SM00822 MUS_2652 MUS_2652 SM00823 Phosphopantetheine attachment site MUS_2652 SM00825 Beta-ketoacyl synthase MUS_2652 SM01294 MUS_2652 MUS_2667 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. MUS_2669 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. MUS_2679 SM01350 MUS_2679 MUS_2688 SM00382 ATPases associated with a variety of cellular activities MUS_2690 SM00062 Bacterial periplasmic substrate-binding proteins MUS_2690 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. MUS_2692 SM00046 Diacylglycerol kinase catalytic domain (presumed) MUS_2694 SM00861 Transketolase, pyrimidine binding domain MUS_2698 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MUS_2700 SM00091 PAS domain MUS_2700 SM00382 ATPases associated with a variety of cellular activities MUS_2709 SM00646 MUS_2709 MUS_2713 SM00530 Helix-turn-helix XRE-family like proteins MUS_2718 SM01005 Alanine racemase, C-terminal domain MUS_2719 SM00448 cheY-homologous receiver domain MUS_2720 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MUS_2723 SM00363 S4 RNA-binding domain MUS_2724 SM00861 Transketolase, pyrimidine binding domain MUS_2732 SM00878 Biotin carboxylase C-terminal domain MUS_2741 SM00382 ATPases associated with a variety of cellular activities MUS_2743 SM00841 Elongation factor P, C-terminal MUS_2743 SM01185 MUS_2743 MUS_2749 SM00529 Helix-turn-helix diphteria tox regulatory element MUS_2751 SM00450 Rhodanese Homology Domain MUS_2755 SM00487 DEAD-like helicases superfamily MUS_2755 SM00490 helicase superfamily c-terminal domain MUS_2758 SM00530 Helix-turn-helix XRE-family like proteins MUS_2770 SM00382 ATPases associated with a variety of cellular activities MUS_2772 SM01091 Transporter associated domain MUS_2776 SM00849 Metallo-beta-lactamase superfamily MUS_2780 SM00631 MUS_2780 MUS_2791 SM00382 ATPases associated with a variety of cellular activities MUS_2792 SM00382 ATPases associated with a variety of cellular activities MUS_2801 SM00257 Lysin motif MUS_2808 SM00518 AP endonuclease family 2 MUS_2809 SM00487 DEAD-like helicases superfamily MUS_2809 SM00490 helicase superfamily c-terminal domain MUS_2817 SM00400 zinc finger MUS_2817 SM00493 MUS_2817 MUS_2820 SM00116 Domain in cystathionine beta-synthase and other proteins. MUS_2829 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MUS_2838 SM00729 Elongator protein 3, MiaB family, Radical SAM MUS_2841 SM00271 DnaJ molecular chaperone homology domain MUS_2845 SM00729 Elongator protein 3, MiaB family, Radical SAM MUS_2846 SM00838 Elongation factor G C-terminus MUS_2853 SM00849 Metallo-beta-lactamase superfamily MUS_2855 SM00278 Helix-hairpin-helix DNA-binding motif class 1 MUS_2859 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MUS_2861 SM01103 MUS_2861 MUS_2876 SM00342 helix_turn_helix, arabinose operon control protein MUS_2876 SM00871 Bacterial transcription activator, effector binding domain MUS_2880 SM00388 His Kinase A (phosphoacceptor) domain MUS_2881 SM00448 cheY-homologous receiver domain MUS_2881 SM00862 Transcriptional regulatory protein, C terminal MUS_2897 SM00849 Metallo-beta-lactamase superfamily MUS_2908 SM00926 Molybdopterin oxidoreductase Fe4S4 domain MUS_2908 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MUS_2926 SM00644 MUS_2926 MUS_2933 SM00710 Parallel beta-helix repeats MUS_2934 SM00047 Lysozyme subfamily 2 MUS_2996 SM00732 Likely ribonuclease with RNase H fold. MUS_2998 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain MUS_3000 SM00382 ATPases associated with a variety of cellular activities MUS_3001 SM00062 Bacterial periplasmic substrate-binding proteins MUS_3001 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. MUS_3007 SM00382 ATPases associated with a variety of cellular activities MUS_3008 SM00028 Tetratricopeptide repeats MUS_3013 SM00382 ATPases associated with a variety of cellular activities MUS_3021 SM00287 Bacterial SH3 domain homologues MUS_3021 SM00646 MUS_3021 MUS_3023 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MUS_3023 SM00954 Region found in RelA / SpoT proteins MUS_3036 SM01323 MUS_3036 MUS_3040 SM00382 ATPases associated with a variety of cellular activities MUS_3041 SM00278 Helix-hairpin-helix DNA-binding motif class 1 MUS_3045 SM00257 Lysin motif MUS_3054 SM01317 MUS_3054 MUS_3074 SM00257 Lysin motif MUS_3078 SM01004 Delta-aminolevulinic acid dehydratase MUS_3085 SM00382 ATPases associated with a variety of cellular activities MUS_3085 SM00464 Found in ATP-dependent protease La (LON) MUS_3086 SM00382 ATPases associated with a variety of cellular activities MUS_3087 SM00382 ATPases associated with a variety of cellular activities MUS_3087 SM00994 ClpX C4-type zinc finger MUS_3087 SM01086 C-terminal, D2-small domain, of ClpB protein MUS_3093 SM01329 MUS_3093 MUS_3094 SM00917 LeuA allosteric (dimerisation) domain MUS_3105 SM00487 DEAD-like helicases superfamily MUS_3105 SM00490 helicase superfamily c-terminal domain MUS_3111 SM00909 Sporulation and spore germination MUS_3113 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_3114 SM00421 helix_turn_helix, Lux Regulon MUS_3121 SM00465 GIY-YIG type nucleases (URI domain) MUS_3124 SM00813 Alpha-L-arabinofuranosidase C-terminus MUS_3125 SM00893 Electron transfer flavoprotein domain MUS_3126 SM00893 Electron transfer flavoprotein domain MUS_3132 SM00463 Small MutS-related domain MUS_3132 SM00533 DNA-binding domain of DNA mismatch repair MUTS family MUS_3132 SM00534 ATPase domain of DNA mismatch repair MUTS family MUS_3133 SM00278 Helix-hairpin-helix DNA-binding motif class 1 MUS_3133 SM00481 DNA polymerase alpha chain like domain MUS_3133 SM00483 DNA polymerase X family MUS_3137 SM00873 B3/4 domain MUS_3137 SM00874 tRNA synthetase B5 domain MUS_3137 SM00896 Ferredoxin-fold anticodon binding domain MUS_3140 SM00967 RNA 2'-O ribose methyltransferase substrate binding MUS_3147 SM00813 Alpha-L-arabinofuranosidase C-terminus MUS_3153 SM01007 Class II Aldolase and Adducin N-terminal domain MUS_3166 SM00448 cheY-homologous receiver domain MUS_3166 SM00850 LytTr DNA-binding domain MUS_3167 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. MUS_3167 SM00387 Histidine kinase-like ATPases MUS_3169 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain MUS_3172 SM00382 ATPases associated with a variety of cellular activities MUS_3177 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MUS_3183 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain MUS_3183 SM01232 MUS_3183 MUS_3184 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs MUS_3184 SM00474 3'-5' exonuclease MUS_3184 SM00475 5'-3' exonuclease MUS_3184 SM00482 DNA polymerase A domain MUS_3186 SM00091 PAS domain MUS_3186 SM00387 Histidine kinase-like ATPases MUS_3186 SM00388 His Kinase A (phosphoacceptor) domain MUS_3187 SM00448 cheY-homologous receiver domain MUS_3187 SM00862 Transcriptional regulatory protein, C terminal MUS_3189 SM01329 MUS_3189 MUS_3191 SM00028 Tetratricopeptide repeats MUS_3203 SM00919 Malic enzyme, NAD binding domain MUS_3203 SM01274 MUS_3203 MUS_3204 SM00481 DNA polymerase alpha chain like domain MUS_3210 SM00116 Domain in cystathionine beta-synthase and other proteins. MUS_3211 SM00849 Metallo-beta-lactamase superfamily MUS_3216 SM00852 Probable molybdopterin binding domain MUS_3228 SM00981 MUS_3228 MUS_3237 SM00267 diguanylate cyclase MUS_3239 SM00363 S4 RNA-binding domain MUS_3241 SM00860 SMI1 / KNR4 family MUS_3259 SM00363 S4 RNA-binding domain MUS_3263 SM00116 Domain in cystathionine beta-synthase and other proteins. MUS_3267 SM00354 helix_turn _helix lactose operon repressor MUS_3268 SM00830 Chorismate mutase type II MUS_3273 SM00382 ATPases associated with a variety of cellular activities MUS_3273 SM00843 MUS_3273 MUS_3281 SM00919 Malic enzyme, NAD binding domain MUS_3281 SM01274 MUS_3281 MUS_3282 SM00849 Metallo-beta-lactamase superfamily MUS_3286 SM00046 Diacylglycerol kinase catalytic domain (presumed) MUS_3293 SM00382 ATPases associated with a variety of cellular activities MUS_3295 SM00363 S4 RNA-binding domain MUS_3302 SM00354 helix_turn _helix lactose operon repressor MUS_3308 SM00450 Rhodanese Homology Domain MUS_3312 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MUS_3312 SM00091 PAS domain MUS_3318 SM00382 ATPases associated with a variety of cellular activities MUS_3319 SM00387 Histidine kinase-like ATPases MUS_3320 SM00448 cheY-homologous receiver domain MUS_3320 SM00862 Transcriptional regulatory protein, C terminal MUS_3322 SM00382 ATPases associated with a variety of cellular activities MUS_3326 SM00382 ATPases associated with a variety of cellular activities MUS_3327 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_3331 SM00729 Elongator protein 3, MiaB family, Radical SAM MUS_3346 SM00382 ATPases associated with a variety of cellular activities MUS_3354 SM01234 MUS_3354 MUS_3355 SM00947 Carbonic anhydrase MUS_3362 SM00382 ATPases associated with a variety of cellular activities MUS_3365 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain MUS_3379 SM00244 prohibitin homologues MUS_3388 SM00047 Lysozyme subfamily 2 MUS_3392 SM00835 Cupin MUS_3398 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MUS_3398 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MUS_3398 SM00319 Homologues of the ligand binding domain of Tar MUS_3399 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MUS_3399 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MUS_3399 SM00319 Homologues of the ligand binding domain of Tar MUS_3400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MUS_3405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MUS_3405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MUS_3405 SM00319 Homologues of the ligand binding domain of Tar MUS_3411 SM00642 Alpha-amylase domain MUS_3413 SM01091 Transporter associated domain MUS_3429 SM00316 Ribosomal protein S1-like RNA-binding domain MUS_3431 SM00344 helix_turn_helix ASNC type MUS_3436 SM00387 Histidine kinase-like ATPases MUS_3436 SM00388 His Kinase A (phosphoacceptor) domain MUS_3437 SM01298 MUS_3437 MUS_3438 SM00479 MUS_3438 MUS_3444 SM00091 PAS domain MUS_3444 SM00387 Histidine kinase-like ATPases MUS_3445 SM00448 cheY-homologous receiver domain MUS_3449 SM00382 ATPases associated with a variety of cellular activities MUS_3461 SM00421 helix_turn_helix, Lux Regulon MUS_3461 SM00448 cheY-homologous receiver domain MUS_3462 SM00387 Histidine kinase-like ATPases MUS_3467 SM00052 Putative diguanylate phosphodiesterase MUS_3475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MUS_3485 SM01002 Alanine dehydrogenase/PNT, C-terminal domain MUS_3485 SM01003 Alanine dehydrogenase/PNT, N-terminal domain MUS_3487 SM00923 MbtH-like protein MUS_3488 SM00823 Phosphopantetheine attachment site MUS_3488 SM00824 Thioesterase MUS_3492 SM00822 MUS_3492 MUS_3507 SM01240 MUS_3507 MUS_3510 SM00382 ATPases associated with a variety of cellular activities MUS_3533 SM00729 Elongator protein 3, MiaB family, Radical SAM MUS_3542 SM00028 Tetratricopeptide repeats MUS_3549 SM00382 ATPases associated with a variety of cellular activities MUS_3550 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_3550 SM00866 MUS_3550 MUS_3556 SM00422 helix_turn_helix, mercury resistance MUS_3558 SM00752 Horizontally Transferred TransMembrane Domain MUS_3561 SM00465 GIY-YIG type nucleases (URI domain) MUS_3572 SM00382 ATPases associated with a variety of cellular activities MUS_3578 SM00382 ATPases associated with a variety of cellular activities MUS_3578 SM00930 MUS_3578 MUS_3581 SM00493 MUS_3581 MUS_3592 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_3598 SM00382 ATPases associated with a variety of cellular activities MUS_3605 SM00448 cheY-homologous receiver domain MUS_3605 SM00862 Transcriptional regulatory protein, C terminal MUS_3606 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MUS_3606 SM00387 Histidine kinase-like ATPases MUS_3606 SM00388 His Kinase A (phosphoacceptor) domain MUS_3614 SM00421 helix_turn_helix, Lux Regulon MUS_3614 SM00448 cheY-homologous receiver domain MUS_3615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MUS_3615 SM00387 Histidine kinase-like ATPases MUS_3622 SM00382 ATPases associated with a variety of cellular activities MUS_3627 SM00387 Histidine kinase-like ATPases MUS_3627 SM00388 His Kinase A (phosphoacceptor) domain MUS_3628 SM00448 cheY-homologous receiver domain MUS_3628 SM00862 Transcriptional regulatory protein, C terminal MUS_3634 SM00835 Cupin MUS_3636 SM00382 ATPases associated with a variety of cellular activities MUS_3649 SM00421 helix_turn_helix, Lux Regulon MUS_3649 SM00448 cheY-homologous receiver domain MUS_3651 SM00382 ATPases associated with a variety of cellular activities MUS_3677 SM00382 ATPases associated with a variety of cellular activities MUS_3680 SM00062 Bacterial periplasmic substrate-binding proteins MUS_3681 SM00062 Bacterial periplasmic substrate-binding proteins MUS_3688 SM00316 Ribosomal protein S1-like RNA-binding domain MUS_3688 SM00357 Cold shock protein domain MUS_3688 SM00955 MUS_3688 MUS_3691 SM00530 Helix-turn-helix XRE-family like proteins MUS_3692 SM00530 Helix-turn-helix XRE-family like proteins MUS_3693 SM00530 Helix-turn-helix XRE-family like proteins MUS_3696 SM00387 Histidine kinase-like ATPases MUS_3696 SM00388 His Kinase A (phosphoacceptor) domain MUS_3697 SM00448 cheY-homologous receiver domain MUS_3697 SM00862 Transcriptional regulatory protein, C terminal MUS_3700 SM00382 ATPases associated with a variety of cellular activities MUS_3705 SM00116 Domain in cystathionine beta-synthase and other proteins. MUS_3705 SM00382 ATPases associated with a variety of cellular activities MUS_3712 SM00116 Domain in cystathionine beta-synthase and other proteins. MUS_3712 SM00382 ATPases associated with a variety of cellular activities MUS_3720 SM01192 MUS_3720 MUS_3720 SM01193 MUS_3720 MUS_3725 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MUS_3728 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_3745 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_3745 SM00895 MUS_3745 MUS_3767 SM00530 Helix-turn-helix XRE-family like proteins MUS_3786 SM00640 Glycosyl hydrolases family 32 MUS_3789 SM00354 helix_turn _helix lactose operon repressor MUS_3794 SM00642 Alpha-amylase domain MUS_3801 SM00642 Alpha-amylase domain MUS_3802 SM00354 helix_turn _helix lactose operon repressor MUS_3806 SM00947 Carbonic anhydrase MUS_3820 SM00028 Tetratricopeptide repeats MUS_3821 SM00387 Histidine kinase-like ATPases MUS_3821 SM00388 His Kinase A (phosphoacceptor) domain MUS_3822 SM00448 cheY-homologous receiver domain MUS_3822 SM00862 Transcriptional regulatory protein, C terminal MUS_3824 SM00382 ATPases associated with a variety of cellular activities MUS_3840 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_3840 SM00866 MUS_3840 MUS_3848 SM00382 ATPases associated with a variety of cellular activities MUS_3849 SM00487 DEAD-like helicases superfamily MUS_3849 SM00490 helicase superfamily c-terminal domain MUS_3857 SM00382 ATPases associated with a variety of cellular activities MUS_3861 SM00823 Phosphopantetheine attachment site MUS_3862 SM00823 Phosphopantetheine attachment site MUS_3864 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MUS_3866 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MUS_3866 SM00245 tail specific protease MUS_3867 SM00710 Parallel beta-helix repeats MUS_3869 SM00382 ATPases associated with a variety of cellular activities MUS_3872 SM00937 MUS_3872 MUS_3873 SM00957 SecA DEAD-like domain MUS_3873 SM00958 SecA preprotein cross-linking domain MUS_3890 SM00487 DEAD-like helicases superfamily MUS_3890 SM00490 helicase superfamily c-terminal domain MUS_3892 SM00421 helix_turn_helix, Lux Regulon MUS_3892 SM00448 cheY-homologous receiver domain MUS_3893 SM00387 Histidine kinase-like ATPases MUS_3901 SM00984 UDP binding domain MUS_3905 SM00646 MUS_3905 MUS_3911 SM00382 ATPases associated with a variety of cellular activities MUS_3918 SM00047 Lysozyme subfamily 2 MUS_3918 SM00287 Bacterial SH3 domain homologues MUS_3933 SM00854 Bacterial capsule synthesis protein PGA_cap MUS_3942 SM00354 helix_turn _helix lactose operon repressor MUS_3945 SM00382 ATPases associated with a variety of cellular activities MUS_3949 SM00287 Bacterial SH3 domain homologues MUS_3963 SM00903 Flavin reductase like domain MUS_3968 SM00344 helix_turn_helix ASNC type MUS_3977 SM00860 SMI1 / KNR4 family MUS_3987 SM00984 UDP binding domain MUS_3995 SM00487 DEAD-like helicases superfamily MUS_3995 SM00490 helicase superfamily c-terminal domain MUS_3997 SM00420 helix_turn_helix, Deoxyribose operon repressor MUS_3997 SM01134 MUS_3997 MUS_4004 SM00028 Tetratricopeptide repeats MUS_4010 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_4017 SM00938 Nitrogen regulatory protein P-II MUS_4019 SM00014 Acid phosphatase homologues MUS_4026 SM00155 Phospholipase D. Active site motifs. MUS_4036 SM00028 Tetratricopeptide repeats MUS_4037 SM00729 Elongator protein 3, MiaB family, Radical SAM MUS_4040 SM00327 von Willebrand factor (vWF) type A domain MUS_4043 SM00327 von Willebrand factor (vWF) type A domain MUS_4050 SM00382 ATPases associated with a variety of cellular activities MUS_4064 SM00226 Low molecular weight phosphatase family MUS_4076 SM00937 MUS_4076 MUS_4080 SM00919 Malic enzyme, NAD binding domain MUS_4080 SM01274 MUS_4080 MUS_4082 SM00357 Cold shock protein domain MUS_4082 SM00382 ATPases associated with a variety of cellular activities MUS_4082 SM00959 Rho termination factor, N-terminal domain MUS_4088 SM00448 cheY-homologous receiver domain MUS_4096 SM00155 Phospholipase D. Active site motifs. MUS_4099 SM00382 ATPases associated with a variety of cellular activities MUS_4100 SM00155 Phospholipase D. Active site motifs. MUS_4105 SM00926 Molybdopterin oxidoreductase Fe4S4 domain MUS_4108 SM00100 Cyclic nucleotide-monophosphate binding domain MUS_4108 SM00419 helix_turn_helix, cAMP Regulatory protein MUS_4110 SM00836 DALR anticodon binding domain MUS_4110 SM01016 Arginyl tRNA synthetase N terminal dom MUS_4113 SM00028 Tetratricopeptide repeats MUS_4114 SM00530 Helix-turn-helix XRE-family like proteins MUS_4126 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_4129 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MUS_4135 SM00382 ATPases associated with a variety of cellular activities MUS_4160 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MUS_4161 SM00387 Histidine kinase-like ATPases MUS_4161 SM00388 His Kinase A (phosphoacceptor) domain MUS_4162 SM00448 cheY-homologous receiver domain MUS_4162 SM00862 Transcriptional regulatory protein, C terminal MUS_4165 SM00382 ATPases associated with a variety of cellular activities MUS_4172 SM00858 MUS_4172 MUS_4184 SM00986 Uracil DNA glycosylase superfamily MUS_4184 SM00987 UreE urease accessory protein, C-terminal domain MUS_4191 SM00640 Glycosyl hydrolases family 32 MUS_4193 SM01061 CAT RNA binding domain MUS_4226 SM00422 helix_turn_helix, mercury resistance MUS_4230 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase MUS_4238 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_4239 SM00363 S4 RNA-binding domain MUS_4240 SM00954 Region found in RelA / SpoT proteins MUS_4260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor MUS_4269 SM01060 MUS_4269 MUS_4274 SM00382 ATPases associated with a variety of cellular activities MUS_4275 SM00382 ATPases associated with a variety of cellular activities MUS_4282 SM00382 ATPases associated with a variety of cellular activities MUS_4302 SM01060 MUS_4302 MUS_4305 SM01061 CAT RNA binding domain MUS_4307 SM00487 DEAD-like helicases superfamily MUS_4307 SM00490 helicase superfamily c-terminal domain MUS_4319 SM00656 MUS_4319 MUS_4323 SM00487 DEAD-like helicases superfamily MUS_4323 SM00490 helicase superfamily c-terminal domain MUS_4333 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain MUS_4335 SM01133 MUS_4335 MUS_4346 SM00382 ATPases associated with a variety of cellular activities MUS_4347 SM00387 Histidine kinase-like ATPases MUS_4348 SM00448 cheY-homologous receiver domain MUS_4348 SM00862 Transcriptional regulatory protein, C terminal MUS_4349 SM00387 Histidine kinase-like ATPases MUS_4349 SM00388 His Kinase A (phosphoacceptor) domain MUS_4350 SM00448 cheY-homologous receiver domain MUS_4350 SM00862 Transcriptional regulatory protein, C terminal MUS_4351 SM00382 ATPases associated with a variety of cellular activities MUS_4354 SM00862 Transcriptional regulatory protein, C terminal MUS_4356 SM01260 MUS_4356 MUS_4357 SM00382 ATPases associated with a variety of cellular activities MUS_4369 SM00420 helix_turn_helix, Deoxyribose operon repressor MUS_4369 SM01134 MUS_4369 MUS_4373 SM00387 Histidine kinase-like ATPases MUS_4376 SM00421 helix_turn_helix, Lux Regulon MUS_4376 SM00448 cheY-homologous receiver domain MUS_4382 SM00564 beta-propeller repeat MUS_4384 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor MUS_4394 SM01092 CO dehydrogenase flavoprotein C-terminal domain MUS_4395 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MUS_4404 SM00901 MUS_4404 MUS_4412 SM00028 Tetratricopeptide repeats MUS_4416 SM00382 ATPases associated with a variety of cellular activities MUS_4417 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. MUS_4418 SM00382 ATPases associated with a variety of cellular activities MUS_4422 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MUS_4422 SM00387 Histidine kinase-like ATPases MUS_4422 SM00388 His Kinase A (phosphoacceptor) domain MUS_4423 SM00448 cheY-homologous receiver domain MUS_4423 SM00862 Transcriptional regulatory protein, C terminal MUS_4428 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MUS_4429 SM00849 Metallo-beta-lactamase superfamily MUS_4432 SM00091 PAS domain MUS_4432 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MUS_4432 SM00387 Histidine kinase-like ATPases MUS_4432 SM00388 His Kinase A (phosphoacceptor) domain MUS_4433 SM00448 cheY-homologous receiver domain MUS_4433 SM00862 Transcriptional regulatory protein, C terminal MUS_4435 SM00788 Adenylosuccinate synthetase MUS_4437 SM00382 ATPases associated with a variety of cellular activities MUS_4449 SM00267 diguanylate cyclase MUS_4454 SM01131 MUS_4454 MUS_4457 SM00640 Glycosyl hydrolases family 32 MUS_4458 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_4458 SM00895 MUS_4458 MUS_4464 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_4467 SM00347 helix_turn_helix multiple antibiotic resistance protein MUS_4476 SM00345 helix_turn_helix gluconate operon transcriptional repressor MUS_4483 SM00354 helix_turn _helix lactose operon repressor MUS_4487 SM00342 helix_turn_helix, arabinose operon control protein MUS_4491 SM00926 Molybdopterin oxidoreductase Fe4S4 domain MUS_4497 SM00470 ParB-like nuclease domain MUS_4499 SM00470 ParB-like nuclease domain MUS_4501 SM01228 MUS_4501 MUS_4503 SM00393 Putative single-stranded nucleic acids-binding domain MUS_4503 SM01245 MUS_4503