locus-tag class description KM396_00005 PF00308 Bacterial dnaA protein KM396_00005 PF08299 Bacterial dnaA protein helix-turn-helix KM396_00005 PF11638 DnaA N-terminal domain KM396_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KM396_00010 PF02767 DNA polymerase III beta subunit, central domain KM396_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KM396_00020 PF02463 RecF/RecN/SMC N terminal domain KM396_00025 PF01751 Toprim domain KM396_00025 PF00204 DNA gyrase B KM396_00025 PF00986 DNA gyrase B subunit, carboxyl terminus KM396_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller KM396_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A KM396_00060 PF14175 YaaC-like Protein KM396_00065 PF00478 IMP dehydrogenase / GMP reductase domain KM396_00065 PF00571 CBS domain KM396_00070 PF00768 D-alanyl-D-alanine carboxypeptidase KM396_00070 PF07943 Penicillin-binding protein 5, C-terminal domain KM396_00075 PF01680 SOR/SNZ family KM396_00080 PF01174 SNO glutamine amidotransferase family KM396_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM396_00085 PF02403 Seryl-tRNA synthetase N-terminal domain KM396_00100 PF01712 Deoxynucleoside kinase KM396_00105 PF01712 Deoxynucleoside kinase KM396_00110 PF00857 Isochorismatase family KM396_00115 PF14437 MafB19-like deaminase KM396_00125 PF12169 DNA polymerase III subunits gamma and tau domain III KM396_00130 PF02575 YbaB/EbfC DNA-binding family KM396_00135 PF13662 Toprim domain KM396_00135 PF02132 RecR protein KM396_00140 PF10704 Protein of unknown function (DUF2508) KM396_00145 PF07441 SigmaK-factor processing regulatory protein BofA KM396_00180 PF01276 Orn/Lys/Arg decarboxylase, major domain KM396_00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM396_00185 PF02223 Thymidylate kinase KM396_00190 PF09115 DNA polymerase III, delta subunit, C terminal KM396_00195 PF04468 PSP1 C-terminal conserved region KM396_00200 PF06156 Initiation control protein YabA KM396_00205 PF05175 Methyltransferase small domain KM396_00210 PF01541 GIY-YIG catalytic domain KM396_00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM396_00220 PF18277 AbrB C-terminal domain KM396_00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM396_00225 PF08264 Anticodon-binding domain of tRNA KM396_00225 PF09334 tRNA synthetases class I (M) KM396_00225 PF01588 Putative tRNA binding domain KM396_00230 PF01026 TatD related DNase KM396_00235 PF13662 Toprim domain KM396_00235 PF13331 Domain of unknown function (DUF4093) KM396_00240 PF00398 Ribosomal RNA adenine dimethylase KM396_00245 PF05582 YabG peptidase U57 KM396_00250 PF06257 Biofilm formation stimulator VEG KM396_00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM396_00260 PF00288 GHMP kinases N terminal domain KM396_00260 PF08544 GHMP kinases C terminal KM396_00265 PF09182 Bacterial purine repressor, N-terminal KM396_00265 PF00156 Phosphoribosyl transferase domain KM396_00270 PF01042 Endoribonuclease L-PSP KM396_00275 PF04026 SpoVG KM396_00280 PF00132 Bacterial transferase hexapeptide (six repeats) KM396_00280 PF00483 Nucleotidyl transferase KM396_00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KM396_00285 PF14572 Phosphoribosyl synthetase-associated domain KM396_00290 PF01195 Peptidyl-tRNA hydrolase KM396_00300 PF02559 CarD-like/TRCF domain KM396_00300 PF00270 DEAD/DEAH box helicase KM396_00300 PF03461 TRCF domain KM396_00300 PF17757 UvrB interaction domain KM396_00300 PF00271 Helicase conserved C-terminal domain KM396_00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM396_00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor KM396_00310 PF01943 Polysaccharide biosynthesis protein KM396_00310 PF14667 Polysaccharide biosynthesis C-terminal domain KM396_00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM396_00315 PF03819 MazG nucleotide pyrophosphohydrolase domain KM396_00320 PF01479 S4 domain KM396_00325 PF07873 YabP family KM396_00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) KM396_00340 PF00575 S1 RNA binding domain KM396_00355 PF07228 Stage II sporulation protein E (SpoIIE) KM396_00360 PF01171 PP-loop family KM396_00360 PF09179 TilS substrate binding domain KM396_00360 PF11734 TilS substrate C-terminal domain KM396_00365 PF00156 Phosphoribosyl transferase domain KM396_00370 PF06480 FtsH Extracellular KM396_00370 PF01434 Peptidase family M41 KM396_00370 PF17862 AAA+ lid domain KM396_00370 PF00004 ATPase family associated with various cellular activities (AAA) KM396_00375 PF03309 Type III pantothenate kinase KM396_00380 PF01430 Hsp33 protein KM396_00385 PF00291 Pyridoxal-phosphate dependent enzyme KM396_00390 PF04715 Anthranilate synthase component I, N terminal region KM396_00390 PF00425 chorismate binding enzyme KM396_00395 PF00117 Glutamine amidotransferase class-I KM396_00400 PF01063 Amino-transferase class IV KM396_00405 PF00809 Pterin binding enzyme KM396_00410 PF02152 Dihydroneopterin aldolase KM396_00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KM396_00420 PF01381 Helix-turn-helix KM396_00425 PF01207 Dihydrouridine synthase (Dus) KM396_00430 PF01336 OB-fold nucleic acid binding domain KM396_00430 PF00152 tRNA synthetases class II (D, K and N) KM396_00450 PF17727 CtsR C-terminal dimerization domain KM396_00450 PF05848 CtsR N-terminal HTH domain KM396_00455 PF02151 UvrB/uvrC motif KM396_00460 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KM396_00465 PF00004 ATPase family associated with various cellular activities (AAA) KM396_00465 PF07724 AAA domain (Cdc48 subfamily) KM396_00465 PF17871 AAA lid domain KM396_00465 PF02861 Clp amino terminal domain, pathogenicity island component KM396_00465 PF10431 C-terminal, D2-small domain, of ClpB protein KM396_00470 PF18073 Rubredoxin metal binding domain KM396_00475 PF10635 DisA bacterial checkpoint controller linker region KM396_00475 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM396_00485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KM396_00490 PF02542 YgbB family KM396_00495 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM396_00500 PF00132 Bacterial transferase hexapeptide (six repeats) KM396_00500 PF06426 Serine acetyltransferase, N-terminal KM396_00505 PF01406 tRNA synthetases class I (C) catalytic domain KM396_00505 PF09190 DALR domain KM396_00510 PF00636 Ribonuclease III domain KM396_00515 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM396_00515 PF00588 SpoU rRNA Methylase family KM396_00520 PF05991 YacP-like NYN domain KM396_00525 PF04542 Sigma-70 region 2 KM396_00525 PF08281 Sigma-70, region 4 KM396_00530 PF00471 Ribosomal protein L33 KM396_00535 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KM396_00540 PF02357 Transcription termination factor nusG KM396_00540 PF00467 KOW motif KM396_00545 PF03946 Ribosomal protein L11, N-terminal domain KM396_00545 PF00298 Ribosomal protein L11, RNA binding domain KM396_00550 PF00687 Ribosomal protein L1p/L10e family KM396_00555 PF00466 Ribosomal protein L10 KM396_00560 PF00542 Ribosomal protein L7/L12 C-terminal domain KM396_00560 PF16320 Ribosomal protein L7/L12 dimerisation domain KM396_00565 PF05175 Methyltransferase small domain KM396_00570 PF04565 RNA polymerase Rpb2, domain 3 KM396_00570 PF04560 RNA polymerase Rpb2, domain 7 KM396_00570 PF04563 RNA polymerase beta subunit KM396_00570 PF04561 RNA polymerase Rpb2, domain 2 KM396_00570 PF00562 RNA polymerase Rpb2, domain 6 KM396_00570 PF10385 RNA polymerase beta subunit external 1 domain KM396_00575 PF04998 RNA polymerase Rpb1, domain 5 KM396_00575 PF05000 RNA polymerase Rpb1, domain 4 KM396_00575 PF04983 RNA polymerase Rpb1, domain 3 KM396_00575 PF00623 RNA polymerase Rpb1, domain 2 KM396_00575 PF04997 RNA polymerase Rpb1, domain 1 KM396_00580 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM396_00585 PF00164 Ribosomal protein S12/S23 KM396_00590 PF00177 Ribosomal protein S7p/S5e KM396_00595 PF00679 Elongation factor G C-terminus KM396_00595 PF03144 Elongation factor Tu domain 2 KM396_00595 PF14492 Elongation Factor G, domain II KM396_00595 PF00009 Elongation factor Tu GTP binding domain KM396_00595 PF03764 Elongation factor G, domain IV KM396_00600 PF03143 Elongation factor Tu C-terminal domain KM396_00600 PF03144 Elongation factor Tu domain 2 KM396_00600 PF00009 Elongation factor Tu GTP binding domain KM396_00605 PF00338 Ribosomal protein S10p/S20e KM396_00610 PF00297 Ribosomal protein L3 KM396_00615 PF00573 Ribosomal protein L4/L1 family KM396_00620 PF00276 Ribosomal protein L23 KM396_00625 PF03947 Ribosomal Proteins L2, C-terminal domain KM396_00625 PF00181 Ribosomal Proteins L2, RNA binding domain KM396_00630 PF00203 Ribosomal protein S19 KM396_00635 PF00237 Ribosomal protein L22p/L17e KM396_00640 PF00189 Ribosomal protein S3, C-terminal domain KM396_00640 PF07650 KH domain KM396_00645 PF00252 Ribosomal protein L16p/L10e KM396_00650 PF00831 Ribosomal L29 protein KM396_00655 PF00366 Ribosomal protein S17 KM396_00660 PF00238 Ribosomal protein L14p/L23e KM396_00665 PF00467 KOW motif KM396_00665 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KM396_00670 PF00281 Ribosomal protein L5 KM396_00670 PF00673 ribosomal L5P family C-terminus KM396_00675 PF00253 Ribosomal protein S14p/S29e KM396_00680 PF00410 Ribosomal protein S8 KM396_00685 PF00347 Ribosomal protein L6 KM396_00690 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KM396_00695 PF03719 Ribosomal protein S5, C-terminal domain KM396_00695 PF00333 Ribosomal protein S5, N-terminal domain KM396_00700 PF00327 Ribosomal protein L30p/L7e KM396_00705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KM396_00710 PF00344 SecY translocase KM396_00715 PF05191 Adenylate kinase, active site lid KM396_00720 PF00557 Metallopeptidase family M24 KM396_00725 PF01176 Translation initiation factor 1A / IF-1 KM396_00730 PF00444 Ribosomal protein L36 KM396_00735 PF00416 Ribosomal protein S13/S18 KM396_00740 PF00411 Ribosomal protein S11 KM396_00745 PF01000 RNA polymerase Rpb3/RpoA insert domain KM396_00745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KM396_00745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KM396_00750 PF01196 Ribosomal protein L17 KM396_00755 PF00005 ABC transporter KM396_00760 PF00005 ABC transporter KM396_00765 PF02361 Cobalt transport protein KM396_00770 PF01416 tRNA pseudouridine synthase KM396_00775 PF00572 Ribosomal protein L13 KM396_00780 PF00380 Ribosomal protein S9/S16 KM396_00790 PF01520 N-acetylmuramoyl-L-alanine amidase KM396_00795 PF10609 NUBPL iron-transfer P-loop NTPase KM396_00800 PF17898 Spore germination GerD central core domain KM396_00805 PF14089 KinB-signalling pathway activation in sporulation KM396_00810 PF01522 Polysaccharide deacetylase KM396_00885 PF00491 Arginase family KM396_00890 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM396_00895 PF07949 YbbR-like protein KM396_00900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM396_00900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM396_00900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM396_00900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM396_00910 PF01380 SIS domain KM396_00915 PF00561 alpha/beta hydrolase fold KM396_00920 PF00392 Bacterial regulatory proteins, gntR family KM396_00920 PF07729 FCD domain KM396_00930 PF02447 GntP family permease KM396_00935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM396_00935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM396_00940 PF00326 Prolyl oligopeptidase family KM396_00940 PF07676 WD40-like Beta Propeller Repeat KM396_00975 PF00528 Binding-protein-dependent transport system inner membrane component KM396_00980 PF09383 NIL domain KM396_00980 PF00005 ABC transporter KM396_00985 PF03180 NLPA lipoprotein KM396_00990 PF08240 Alcohol dehydrogenase GroES-like domain KM396_00990 PF00107 Zinc-binding dehydrogenase KM396_01000 PF01565 FAD binding domain KM396_01005 PF07690 Major Facilitator Superfamily KM396_01030 PF00528 Binding-protein-dependent transport system inner membrane component KM396_01035 PF12911 N-terminal TM domain of oligopeptide transport permease C KM396_01035 PF00528 Binding-protein-dependent transport system inner membrane component KM396_01040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM396_01040 PF00005 ABC transporter KM396_01045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM396_01045 PF00005 ABC transporter KM396_01050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_01060 PF12833 Helix-turn-helix domain KM396_01075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_01080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_01085 PF00248 Aldo/keto reductase family KM396_01090 PF03807 NADP oxidoreductase coenzyme F420-dependent KM396_01090 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM396_01095 PF04973 Nicotinamide mononucleotide transporter KM396_01100 PF06800 Sugar transport protein KM396_01105 PF00528 Binding-protein-dependent transport system inner membrane component KM396_01115 PF12727 PBP superfamily domain KM396_01115 PF12728 Helix-turn-helix domain KM396_01125 PF03466 LysR substrate binding domain KM396_01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM396_01130 PF00892 EamA-like transporter family KM396_01135 PF14142 YrzO-like protein KM396_01145 PF01553 Acyltransferase KM396_01155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM396_01155 PF00356 Bacterial regulatory proteins, lacI family KM396_01165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM396_01165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM396_01175 PF01026 TatD related DNase KM396_01180 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KM396_01205 PF12848 ABC transporter KM396_01205 PF16326 ABC transporter C-terminal domain KM396_01205 PF00005 ABC transporter KM396_01220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_01225 PF00528 Binding-protein-dependent transport system inner membrane component KM396_01230 PF12911 N-terminal TM domain of oligopeptide transport permease C KM396_01230 PF00528 Binding-protein-dependent transport system inner membrane component KM396_01235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM396_01235 PF00005 ABC transporter KM396_01240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM396_01240 PF00005 ABC transporter KM396_01260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM396_01265 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM396_01275 PF07690 Major Facilitator Superfamily KM396_01285 PF01225 Mur ligase family, catalytic domain KM396_01285 PF02875 Mur ligase family, glutamate ligase domain KM396_01285 PF08245 Mur ligase middle domain KM396_01290 PF00270 DEAD/DEAH box helicase KM396_01290 PF00271 Helicase conserved C-terminal domain KM396_01295 PF03851 UV-endonuclease UvdE KM396_01300 PF01694 Rhomboid family KM396_01305 PF01648 4'-phosphopantetheinyl transferase superfamily KM396_01315 PF00842 Alanine racemase, C-terminal domain KM396_01315 PF01168 Alanine racemase, N-terminal domain KM396_01320 PF01402 Ribbon-helix-helix protein, copG family KM396_01325 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KM396_01330 PF17674 HHH domain KM396_01330 PF00575 S1 RNA binding domain KM396_01330 PF09371 Tex-like protein N-terminal domain KM396_01330 PF16921 Tex protein YqgF-like domain KM396_01340 PF10263 SprT-like family KM396_01340 PF17283 SprT-like zinc ribbon domain KM396_01425 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KM396_01430 PF00814 Glycoprotease family KM396_01435 PF00583 Acetyltransferase (GNAT) family KM396_01440 PF00814 Glycoprotease family KM396_01445 PF12848 ABC transporter KM396_01445 PF00005 ABC transporter KM396_01445 PF16326 ABC transporter C-terminal domain KM396_01450 PF02629 CoA binding domain KM396_01450 PF06971 Putative DNA-binding protein N-terminus KM396_01460 PF02517 CPBP intramembrane metalloprotease KM396_01465 PF00166 Chaperonin 10 Kd subunit KM396_01470 PF00118 TCP-1/cpn60 chaperonin family KM396_01475 PF02540 NAD synthase KM396_01475 PF00958 GMP synthase C terminal domain KM396_01475 PF00117 Glutamine amidotransferase class-I KM396_01480 PF00860 Permease family KM396_01485 PF00072 Response regulator receiver domain KM396_01485 PF00486 Transcriptional regulatory protein, C terminal KM396_01490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_01490 PF00512 His Kinase A (phospho-acceptor) domain KM396_01490 PF00989 PAS fold KM396_01490 PF16736 Single Cache-like KM396_01520 PF08241 Methyltransferase domain KM396_01560 PF02673 Bacitracin resistance protein BacA KM396_01570 PF00005 ABC transporter KM396_01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_01575 PF00512 His Kinase A (phospho-acceptor) domain KM396_01580 PF00072 Response regulator receiver domain KM396_01580 PF00486 Transcriptional regulatory protein, C terminal KM396_01600 PF00731 AIR carboxylase KM396_01605 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KM396_01605 PF02222 ATP-grasp domain KM396_01610 PF10397 Adenylosuccinate lyase C-terminus KM396_01610 PF00206 Lyase KM396_01615 PF01259 SAICAR synthetase KM396_01620 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KM396_01630 PF00586 AIR synthase related protein, N-terminal domain KM396_01630 PF02769 AIR synthase related protein, C-terminal domain KM396_01630 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KM396_01635 PF00156 Phosphoribosyl transferase domain KM396_01640 PF00586 AIR synthase related protein, N-terminal domain KM396_01640 PF02769 AIR synthase related protein, C-terminal domain KM396_01645 PF00551 Formyl transferase KM396_01650 PF01808 AICARFT/IMPCHase bienzyme KM396_01650 PF02142 MGS-like domain KM396_01655 PF02844 Phosphoribosylglycinamide synthetase, N domain KM396_01655 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KM396_01655 PF02843 Phosphoribosylglycinamide synthetase, C domain KM396_01675 PF01884 PcrB family KM396_01680 PF00580 UvrD/REP helicase N-terminal domain KM396_01680 PF13361 UvrD-like helicase C-terminal domain KM396_01685 PF01653 NAD-dependent DNA ligase adenylation domain KM396_01685 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KM396_01685 PF03120 NAD-dependent DNA ligase OB-fold domain KM396_01685 PF00533 BRCA1 C Terminus (BRCT) domain KM396_01685 PF12826 Helix-hairpin-helix motif KM396_01690 PF07537 CamS sex pheromone cAM373 precursor KM396_01695 PF01925 Sulfite exporter TauE/SafE KM396_01700 PF00171 Aldehyde dehydrogenase family KM396_01710 PF00857 Isochorismatase family KM396_01715 PF09383 NIL domain KM396_01715 PF00005 ABC transporter KM396_01720 PF00528 Binding-protein-dependent transport system inner membrane component KM396_01725 PF03180 NLPA lipoprotein KM396_01745 PF01047 MarR family KM396_01755 PF02686 Glu-tRNAGln amidotransferase C subunit KM396_01760 PF01425 Amidase KM396_01765 PF02637 GatB domain KM396_01765 PF02934 GatB/GatE catalytic domain KM396_01770 PF00781 Diacylglycerol kinase catalytic domain KM396_01775 PF13419 Haloacid dehalogenase-like hydrolase KM396_01780 PF00202 Aminotransferase class-III KM396_01785 PF00158 Sigma-54 interaction domain KM396_01790 PF00171 Aldehyde dehydrogenase family KM396_01795 PF00893 Small Multidrug Resistance protein KM396_01800 PF02073 Thermophilic metalloprotease (M29) KM396_01815 PF07662 Na+ dependent nucleoside transporter C-terminus KM396_01815 PF01773 Na+ dependent nucleoside transporter N-terminus KM396_01815 PF07670 Nucleoside recognition KM396_01820 PF05958 tRNA (Uracil-5-)-methyltransferase KM396_01820 PF01938 TRAM domain KM396_01820 PF02475 Met-10+ like-protein KM396_01825 PF01207 Dihydrouridine synthase (Dus) KM396_01835 PF07308 Protein of unknown function (DUF1456) KM396_01850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM396_01850 PF13378 Enolase C-terminal domain-like KM396_01860 PF03553 Na+/H+ antiporter family KM396_01865 PF01546 Peptidase family M20/M25/M40 KM396_01865 PF07687 Peptidase dimerisation domain KM396_01875 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_01875 PF13192 Thioredoxin domain KM396_01880 PF00578 AhpC/TSA family KM396_01885 PF01636 Phosphotransferase enzyme family KM396_01890 PF01008 Initiation factor 2 subunit family KM396_01895 PF00596 Class II Aldolase and Adducin N-terminal domain KM396_01900 PF01032 FecCD transport family KM396_01905 PF01032 FecCD transport family KM396_01910 PF01497 Periplasmic binding protein KM396_01915 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_01925 PF12728 Helix-turn-helix domain KM396_01960 PF13188 PAS domain KM396_01960 PF00989 PAS fold KM396_01960 PF00512 His Kinase A (phospho-acceptor) domain KM396_01960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_01960 PF13426 PAS domain KM396_01980 PF10127 RNA repair pathway DNA polymerase beta family KM396_01985 PF07690 Major Facilitator Superfamily KM396_01990 PF01266 FAD dependent oxidoreductase KM396_01990 PF00355 Rieske [2Fe-2S] domain KM396_02000 PF00528 Binding-protein-dependent transport system inner membrane component KM396_02005 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM396_02010 PF00005 ABC transporter KM396_02015 PF12729 Four helix bundle sensory module for signal transduction KM396_02015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM396_02015 PF00672 HAMP domain KM396_02020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM396_02020 PF00672 HAMP domain KM396_02020 PF12729 Four helix bundle sensory module for signal transduction KM396_02025 PF16657 Maltogenic Amylase, C-terminal domain KM396_02025 PF00128 Alpha amylase, catalytic domain KM396_02030 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM396_02030 PF00367 phosphotransferase system, EIIB KM396_02030 PF02378 Phosphotransferase system, EIIC KM396_02035 PF03372 Endonuclease/Exonuclease/phosphatase family KM396_02040 PF01061 ABC-2 type transporter KM396_02045 PF01131 DNA topoisomerase KM396_02045 PF01751 Toprim domain KM396_02050 PF02110 Hydroxyethylthiazole kinase family KM396_02055 PF02581 Thiamine monophosphate synthase KM396_02060 PF03605 Anaerobic c4-dicarboxylate membrane transporter KM396_02065 PF00672 HAMP domain KM396_02065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM396_02070 PF01910 Thiamine-binding protein KM396_02075 PF00528 Binding-protein-dependent transport system inner membrane component KM396_02085 PF00005 ABC transporter KM396_02090 PF12848 ABC transporter KM396_02090 PF00005 ABC transporter KM396_02095 PF00704 Glycosyl hydrolases family 18 KM396_02095 PF00041 Fibronectin type III domain KM396_02115 PF00440 Bacterial regulatory proteins, tetR family KM396_02115 PF08360 QacR-like protein, C-terminal region KM396_02135 PF11700 Vacuole effluxer Atg22 like KM396_02150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM396_02150 PF09180 Prolyl-tRNA synthetase, C-terminal KM396_02150 PF03129 Anticodon binding domain KM396_02160 PF00480 ROK family KM396_02165 PF02342 TerD domain KM396_02170 PF02342 TerD domain KM396_02175 PF02342 TerD domain KM396_02180 PF03741 Integral membrane protein TerC family KM396_02185 PF14266 Putative component of 'biosynthetic module' KM396_02190 PF05816 Toxic anion resistance protein (TelA) KM396_02195 PF00689 Cation transporting ATPase, C-terminus KM396_02195 PF00690 Cation transporter/ATPase, N-terminus KM396_02200 PF06569 Protein of unknown function (DUF1128) KM396_02205 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM396_02215 PF03631 Virulence factor BrkB KM396_02225 PF00892 EamA-like transporter family KM396_02245 PF09335 SNARE associated Golgi protein KM396_02260 PF16242 Pyridoxamine 5'-phosphate oxidase like KM396_02265 PF01699 Sodium/calcium exchanger protein KM396_02270 PF14167 YfkD-like protein KM396_02275 PF08756 YfkB-like domain KM396_02275 PF04055 Radical SAM superfamily KM396_02285 PF05683 Fumarase C-terminus KM396_02285 PF05681 Fumarate hydratase (Fumerase) KM396_02290 PF01522 Polysaccharide deacetylase KM396_02300 PF00730 HhH-GPD superfamily base excision DNA repair protein KM396_02305 PF01938 TRAM domain KM396_02305 PF05958 tRNA (Uracil-5-)-methyltransferase KM396_02310 PF14659 Phage integrase, N-terminal SAM-like domain KM396_02310 PF00589 Phage integrase family KM396_02320 PF01381 Helix-turn-helix KM396_02335 PF01381 Helix-turn-helix KM396_02370 PF07319 Primosomal protein DnaI N-terminus KM396_02370 PF01695 IstB-like ATP binding protein KM396_02590 PF01183 Glycosyl hydrolases family 25 KM396_02600 PF01416 tRNA pseudouridine synthase KM396_02610 PF02954 Bacterial regulatory protein, Fis family KM396_02610 PF00158 Sigma-54 interaction domain KM396_02610 PF13426 PAS domain KM396_02620 PF00324 Amino acid permease KM396_02625 PF01546 Peptidase family M20/M25/M40 KM396_02625 PF07687 Peptidase dimerisation domain KM396_02650 PF04960 Glutaminase KM396_02655 PF02378 Phosphotransferase system, EIIC KM396_02655 PF00367 phosphotransferase system, EIIB KM396_02660 PF00144 Beta-lactamase KM396_02675 PF00535 Glycosyl transferase family 2 KM396_02680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM396_02680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM396_02680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM396_02685 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM396_02685 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM396_02685 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM396_02690 PF01370 NAD dependent epimerase/dehydratase family KM396_02690 PF00551 Formyl transferase KM396_02690 PF02911 Formyl transferase, C-terminal domain KM396_02695 PF00535 Glycosyl transferase family 2 KM396_02705 PF02901 Pyruvate formate lyase-like KM396_02705 PF01228 Glycine radical KM396_02710 PF04055 Radical SAM superfamily KM396_02715 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KM396_02715 PF04101 Glycosyltransferase family 28 C-terminal domain KM396_02730 PF01979 Amidohydrolase family KM396_02735 PF08338 Domain of unknown function (DUF1731) KM396_02735 PF01370 NAD dependent epimerase/dehydratase family KM396_02740 PF02631 RecX family KM396_02755 PF08176 Small acid-soluble spore protein K family KM396_02760 PF14043 WVELL protein KM396_02765 PF04307 LexA-binding, inner membrane-associated putative hydrolase KM396_02770 PF00730 HhH-GPD superfamily base excision DNA repair protein KM396_02770 PF14815 NUDIX domain KM396_02780 PF04259 Small, acid-soluble spore protein, gamma-type KM396_02785 PF14182 YgaB-like protein KM396_02790 PF04167 Protein of unknown function (DUF402) KM396_02795 PF00664 ABC transporter transmembrane region KM396_02795 PF00005 ABC transporter KM396_02800 PF06081 Aromatic acid exporter family member 1 KM396_02805 PF04898 Glutamate synthase central domain KM396_02805 PF00310 Glutamine amidotransferases class-II KM396_02805 PF01493 GXGXG motif KM396_02805 PF01645 Conserved region in glutamate synthase KM396_02810 PF00202 Aminotransferase class-III KM396_02815 PF00005 ABC transporter KM396_02830 PF07885 Ion channel KM396_02835 PF00578 AhpC/TSA family KM396_02840 PF01475 Ferric uptake regulator family KM396_02845 PF11023 Zinc-ribbon containing domain KM396_02945 PF01709 Transcriptional regulator KM396_02950 PF13344 Haloacid dehalogenase-like hydrolase KM396_02950 PF00293 NUDIX domain KM396_02955 PF00912 Transglycosylase KM396_02955 PF00905 Penicillin binding protein transpeptidase domain KM396_02960 PF13462 Thioredoxin KM396_02970 PF08331 Domain of unknown function (DUF1730) KM396_02975 PF12671 Putative amidase domain KM396_02980 PF00588 SpoU rRNA Methylase family KM396_02985 PF03707 Bacterial signalling protein N terminal repeat KM396_02985 PF00990 Diguanylate cyclase, GGDEF domain KM396_02985 PF00563 EAL domain KM396_02990 PF06798 PrkA serine protein kinase C-terminal domain KM396_02990 PF08298 PrkA AAA domain KM396_02995 PF04285 Protein of unknown function (DUF444) KM396_03010 PF02028 BCCT, betaine/carnitine/choline family transporter KM396_03015 PF08453 Peptidase family M9 N-terminal KM396_03015 PF18496 Collagenase G catalytic helper subdomain KM396_03015 PF01752 Collagenase KM396_03025 PF01145 SPFH domain / Band 7 family KM396_03025 PF15975 Flotillin KM396_03030 PF02743 Cache domain KM396_03030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM396_03030 PF00672 HAMP domain KM396_03035 PF00989 PAS fold KM396_03035 PF17203 Single cache domain 3 KM396_03035 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM396_03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_03045 PF03600 Citrate transporter KM396_03065 PF04309 Glycerol-3-phosphate responsive antiterminator KM396_03070 PF00005 ABC transporter KM396_03070 PF17912 MalK OB fold domain KM396_03075 PF00528 Binding-protein-dependent transport system inner membrane component KM396_03080 PF00528 Binding-protein-dependent transport system inner membrane component KM396_03085 PF13416 Bacterial extracellular solute-binding protein KM396_03090 PF00149 Calcineurin-like phosphoesterase KM396_03095 PF00072 Response regulator receiver domain KM396_03095 PF00486 Transcriptional regulatory protein, C terminal KM396_03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_03100 PF00512 His Kinase A (phospho-acceptor) domain KM396_03110 PF13529 Peptidase_C39 like family KM396_03115 PF02743 Cache domain KM396_03115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM396_03115 PF00672 HAMP domain KM396_03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_03120 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM396_03120 PF17203 Single cache domain 3 KM396_03120 PF00989 PAS fold KM396_03125 PF00072 Response regulator receiver domain KM396_03130 PF03390 2-hydroxycarboxylate transporter family KM396_03135 PF00390 Malic enzyme, N-terminal domain KM396_03135 PF03949 Malic enzyme, NAD binding domain KM396_03145 PF00892 EamA-like transporter family KM396_03150 PF00155 Aminotransferase class I and II KM396_03150 PF00392 Bacterial regulatory proteins, gntR family KM396_03160 PF00989 PAS fold KM396_03160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_03160 PF00672 HAMP domain KM396_03160 PF18698 Histidine kinase sensor domain KM396_03160 PF00512 His Kinase A (phospho-acceptor) domain KM396_03165 PF00072 Response regulator receiver domain KM396_03165 PF00486 Transcriptional regulatory protein, C terminal KM396_03170 PF00583 Acetyltransferase (GNAT) family KM396_03170 PF13508 Acetyltransferase (GNAT) domain KM396_03175 PF02634 FdhD/NarQ family KM396_03180 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM396_03180 PF00037 4Fe-4S binding domain KM396_03180 PF01568 Molydopterin dinucleotide binding domain KM396_03180 PF00384 Molybdopterin oxidoreductase KM396_03180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM396_03185 PF07849 Protein of unknown function (DUF1641) KM396_03195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM396_03195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM396_03200 PF13520 Amino acid permease KM396_03205 PF01022 Bacterial regulatory protein, arsR family KM396_03210 PF00403 Heavy-metal-associated domain KM396_03215 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KM396_03215 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KM396_03215 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KM396_03230 PF07504 Fungalysin/Thermolysin Propeptide Motif KM396_03230 PF03413 Peptidase propeptide and YPEB domain KM396_03230 PF01447 Thermolysin metallopeptidase, catalytic domain KM396_03230 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM396_03250 PF04294 VanW like protein KM396_03255 PF03816 Cell envelope-related transcriptional attenuator domain KM396_03260 PF07662 Na+ dependent nucleoside transporter C-terminus KM396_03260 PF01773 Na+ dependent nucleoside transporter N-terminus KM396_03265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM396_03270 PF00571 CBS domain KM396_03270 PF03471 Transporter associated domain KM396_03270 PF01595 Cyclin M transmembrane N-terminal domain KM396_03275 PF10415 Fumarase C C-terminus KM396_03275 PF00206 Lyase KM396_03280 PF02652 L-lactate permease KM396_03285 PF01022 Bacterial regulatory protein, arsR family KM396_03290 PF08141 Small acid-soluble spore protein H family KM396_03295 PF00854 POT family KM396_03300 PF01497 Periplasmic binding protein KM396_03305 PF01032 FecCD transport family KM396_03310 PF01032 FecCD transport family KM396_03315 PF00005 ABC transporter KM396_03320 PF08241 Methyltransferase domain KM396_03325 PF00155 Aminotransferase class I and II KM396_03330 PF01370 NAD dependent epimerase/dehydratase family KM396_03335 PF13344 Haloacid dehalogenase-like hydrolase KM396_03335 PF00293 NUDIX domain KM396_03340 PF00092 von Willebrand factor type A domain KM396_03345 PF07728 AAA domain (dynein-related subfamily) KM396_03350 PF13396 Phospholipase_D-nuclease N-terminal KM396_03350 PF13091 PLD-like domain KM396_03365 PF00990 Diguanylate cyclase, GGDEF domain KM396_03365 PF03707 Bacterial signalling protein N terminal repeat KM396_03365 PF00563 EAL domain KM396_03370 PF13520 Amino acid permease KM396_03375 PF00392 Bacterial regulatory proteins, gntR family KM396_03375 PF07702 UTRA domain KM396_03380 PF02378 Phosphotransferase system, EIIC KM396_03380 PF00367 phosphotransferase system, EIIB KM396_03385 PF16657 Maltogenic Amylase, C-terminal domain KM396_03385 PF00128 Alpha amylase, catalytic domain KM396_03400 PF03323 Bacillus/Clostridium GerA spore germination protein KM396_03410 PF01636 Phosphotransferase enzyme family KM396_03415 PF01235 Sodium:alanine symporter family KM396_03420 PF00005 ABC transporter KM396_03425 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM396_03430 PF00528 Binding-protein-dependent transport system inner membrane component KM396_03435 PF00528 Binding-protein-dependent transport system inner membrane component KM396_03440 PF00324 Amino acid permease KM396_03465 PF13280 WYL domain KM396_03465 PF08279 HTH domain KM396_03470 PF01872 RibD C-terminal domain KM396_03475 PF00989 PAS fold KM396_03475 PF00512 His Kinase A (phospho-acceptor) domain KM396_03475 PF00672 HAMP domain KM396_03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_03475 PF18698 Histidine kinase sensor domain KM396_03480 PF00072 Response regulator receiver domain KM396_03480 PF00486 Transcriptional regulatory protein, C terminal KM396_03490 PF01740 STAS domain KM396_03490 PF00916 Sulfate permease family KM396_03495 PF00582 Universal stress protein family KM396_03505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_03510 PF00528 Binding-protein-dependent transport system inner membrane component KM396_03515 PF00528 Binding-protein-dependent transport system inner membrane component KM396_03520 PF00005 ABC transporter KM396_03520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM396_03525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM396_03525 PF00005 ABC transporter KM396_03530 PF07690 Major Facilitator Superfamily KM396_03535 PF01047 MarR family KM396_03545 PF00356 Bacterial regulatory proteins, lacI family KM396_03550 PF00294 pfkB family carbohydrate kinase KM396_03555 PF05025 RbsD / FucU transport protein family KM396_03560 PF00005 ABC transporter KM396_03565 PF02653 Branched-chain amino acid transport system / permease component KM396_03570 PF13407 Periplasmic binding protein domain KM396_03575 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM396_03580 PF05547 Immune inhibitor A peptidase M6 KM396_03595 PF08240 Alcohol dehydrogenase GroES-like domain KM396_03595 PF00107 Zinc-binding dehydrogenase KM396_03605 PF00882 Zinc dependent phospholipase C KM396_03610 PF03372 Endonuclease/Exonuclease/phosphatase family KM396_03635 PF02673 Bacitracin resistance protein BacA KM396_03640 PF02743 Cache domain KM396_03640 PF00672 HAMP domain KM396_03640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM396_03645 PF01476 LysM domain KM396_03645 PF06725 3D domain KM396_03650 PF01381 Helix-turn-helix KM396_03660 PF04203 Sortase domain KM396_03665 PF00854 POT family KM396_03670 PF05525 Branched-chain amino acid transport protein KM396_03685 PF00324 Amino acid permease KM396_03690 PF00860 Permease family KM396_03715 PF02254 TrkA-N domain KM396_03715 PF02080 TrkA-C domain KM396_03715 PF00999 Sodium/hydrogen exchanger family KM396_03725 PF00510 Cytochrome c oxidase subunit III KM396_03730 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM396_03735 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM396_03740 PF00324 Amino acid permease KM396_03745 PF13529 Peptidase_C39 like family KM396_03750 PF01546 Peptidase family M20/M25/M40 KM396_03750 PF07687 Peptidase dimerisation domain KM396_03755 PF11755 Protein of unknown function (DUF3311) KM396_03760 PF00474 Sodium:solute symporter family KM396_03765 PF03323 Bacillus/Clostridium GerA spore germination protein KM396_03770 PF03845 Spore germination protein KM396_03775 PF05504 Spore germination B3/ GerAC like, C-terminal KM396_03780 PF07664 Ferrous iron transport protein B C terminus KM396_03780 PF17910 FeoB cytosolic helical domain KM396_03780 PF07670 Nucleoside recognition KM396_03780 PF02421 Ferrous iron transport protein B KM396_03785 PF17910 FeoB cytosolic helical domain KM396_03785 PF07664 Ferrous iron transport protein B C terminus KM396_03785 PF07670 Nucleoside recognition KM396_03785 PF02421 Ferrous iron transport protein B KM396_03790 PF04023 FeoA domain KM396_03790 PF07664 Ferrous iron transport protein B C terminus KM396_03790 PF17910 FeoB cytosolic helical domain KM396_03790 PF02421 Ferrous iron transport protein B KM396_03790 PF07670 Nucleoside recognition KM396_03795 PF12849 PBP superfamily domain KM396_03800 PF00528 Binding-protein-dependent transport system inner membrane component KM396_03805 PF00528 Binding-protein-dependent transport system inner membrane component KM396_03815 PF00873 AcrB/AcrD/AcrF family KM396_03935 PF00571 CBS domain KM396_03950 PF08239 Bacterial SH3 domain KM396_03950 PF00246 Zinc carboxypeptidase KM396_03955 PF03070 TENA/THI-4/PQQC family KM396_03960 PF00005 ABC transporter KM396_03965 PF00528 Binding-protein-dependent transport system inner membrane component KM396_03970 PF09084 NMT1/THI5 like KM396_03975 PF02581 Thiamine monophosphate synthase KM396_03980 PF01266 FAD dependent oxidoreductase KM396_03985 PF02597 ThiS family KM396_03990 PF05690 Thiazole biosynthesis protein ThiG KM396_03995 PF00899 ThiF family KM396_04000 PF08543 Phosphomethylpyrimidine kinase KM396_04025 PF03814 Potassium-transporting ATPase A subunit KM396_04035 PF02669 K+-transporting ATPase, c chain KM396_04040 PF02702 Osmosensitive K+ channel His kinase sensor domain KM396_04045 PF07690 Major Facilitator Superfamily KM396_04050 PF01047 MarR family KM396_04065 PF00860 Permease family KM396_04085 PF00294 pfkB family carbohydrate kinase KM396_04090 PF08244 Glycosyl hydrolases family 32 C terminal KM396_04090 PF00251 Glycosyl hydrolases family 32 N-terminal domain KM396_04095 PF00367 phosphotransferase system, EIIB KM396_04095 PF02378 Phosphotransferase system, EIIC KM396_04100 PF13407 Periplasmic binding protein domain KM396_04100 PF00356 Bacterial regulatory proteins, lacI family KM396_04110 PF00085 Thioredoxin KM396_04115 PF02600 Disulfide bond formation protein DsbB KM396_04120 PF14148 YhdB-like protein KM396_04140 PF03323 Bacillus/Clostridium GerA spore germination protein KM396_04150 PF00881 Nitroreductase family KM396_04155 PF04293 SpoVR like protein KM396_04180 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_04180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM396_04185 PF02583 Metal-sensitive transcriptional repressor KM396_04190 PF00581 Rhodanese-like domain KM396_04190 PF01206 Sulfurtransferase TusA KM396_04195 PF00581 Rhodanese-like domain KM396_04195 PF00753 Metallo-beta-lactamase superfamily KM396_04200 PF01206 Sulfurtransferase TusA KM396_04205 PF00581 Rhodanese-like domain KM396_04215 PF13686 DsrE/DsrF/DrsH-like family KM396_04220 PF01925 Sulfite exporter TauE/SafE KM396_04230 PF03816 Cell envelope-related transcriptional attenuator domain KM396_04235 PF08240 Alcohol dehydrogenase GroES-like domain KM396_04235 PF00107 Zinc-binding dehydrogenase KM396_04240 PF02690 Na+/Pi-cotransporter KM396_04245 PF07690 Major Facilitator Superfamily KM396_04255 PF08279 HTH domain KM396_04255 PF05043 Mga helix-turn-helix domain KM396_04255 PF00874 PRD domain KM396_04255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM396_04260 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM396_04265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM396_04270 PF02378 Phosphotransferase system, EIIC KM396_04285 PF01476 LysM domain KM396_04285 PF06725 3D domain KM396_04290 PF12704 MacB-like periplasmic core domain KM396_04290 PF02687 FtsX-like permease family KM396_04295 PF00005 ABC transporter KM396_04305 PF09529 Integral membrane protein (intg_mem_TP0381) KM396_04320 PF05525 Branched-chain amino acid transport protein KM396_04325 PF05067 Manganese containing catalase KM396_04330 PF12652 CotJB protein KM396_04335 PF11007 Spore coat associated protein JA (CotJA) KM396_04350 PF02735 Ku70/Ku80 beta-barrel domain KM396_04360 PF09335 SNARE associated Golgi protein KM396_04395 PF13520 Amino acid permease KM396_04400 PF00999 Sodium/hydrogen exchanger family KM396_04410 PF01418 Helix-turn-helix domain, rpiR family KM396_04410 PF01380 SIS domain KM396_04415 PF01380 SIS domain KM396_04420 PF00367 phosphotransferase system, EIIB KM396_04420 PF02378 Phosphotransferase system, EIIC KM396_04430 PF07681 DoxX KM396_04445 PF00892 EamA-like transporter family KM396_04450 PF01037 Lrp/AsnC ligand binding domain KM396_04460 PF00893 Small Multidrug Resistance protein KM396_04465 PF00893 Small Multidrug Resistance protein KM396_04470 PF00440 Bacterial regulatory proteins, tetR family KM396_04470 PF17934 Tetracyclin repressor-like, C-terminal domain KM396_04475 PF07690 Major Facilitator Superfamily KM396_04480 PF01638 HxlR-like helix-turn-helix KM396_04490 PF02525 Flavodoxin-like fold KM396_04495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_04495 PF12793 Sugar transport-related sRNA regulator N-term KM396_04500 PF07690 Major Facilitator Superfamily KM396_04510 PF01965 DJ-1/PfpI family KM396_04515 PF18011 C-terminal domain found in long catalases KM396_04515 PF06628 Catalase-related immune-responsive KM396_04515 PF00199 Catalase KM396_04525 PF13520 Amino acid permease KM396_04530 PF01177 Asp/Glu/Hydantoin racemase KM396_04540 PF00171 Aldehyde dehydrogenase family KM396_04545 PF00664 ABC transporter transmembrane region KM396_04545 PF00005 ABC transporter KM396_04555 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM396_04560 PF00528 Binding-protein-dependent transport system inner membrane component KM396_04565 PF00005 ABC transporter KM396_04570 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM396_04580 PF14398 YheC/D like ATP-grasp KM396_04590 PF04286 Protein of unknown function (DUF445) KM396_04595 PF06133 Control of competence regulator ComK, YlbF/YmcA KM396_04610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM396_04610 PF00205 Thiamine pyrophosphate enzyme, central domain KM396_04610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM396_04615 PF03306 Alpha-acetolactate decarboxylase KM396_04625 PF02245 Methylpurine-DNA glycosylase (MPG) KM396_04645 PF04055 Radical SAM superfamily KM396_04650 PF00501 AMP-binding enzyme KM396_04650 PF13193 AMP-binding enzyme C-terminal domain KM396_04660 PF01740 STAS domain KM396_04660 PF00916 Sulfate permease family KM396_04680 PF07517 SecA DEAD-like domain KM396_04680 PF01043 SecA preprotein cross-linking domain KM396_04680 PF07516 SecA Wing and Scaffold domain KM396_04685 PF01943 Polysaccharide biosynthesis protein KM396_04685 PF14667 Polysaccharide biosynthesis C-terminal domain KM396_04695 PF13205 Bacterial Ig-like domain KM396_04695 PF02368 Bacterial Ig-like domain (group 2) KM396_04695 PF00395 S-layer homology domain KM396_04700 PF00395 S-layer homology domain KM396_04710 PF03062 MBOAT, membrane-bound O-acyltransferase family KM396_04715 PF03062 MBOAT, membrane-bound O-acyltransferase family KM396_04730 PF00378 Enoyl-CoA hydratase/isomerase KM396_04750 PF05343 M42 glutamyl aminopeptidase KM396_04755 PF01520 N-acetylmuramoyl-L-alanine amidase KM396_04755 PF00395 S-layer homology domain KM396_04770 PF05544 Proline racemase KM396_04775 PF02423 Ornithine cyclodeaminase/mu-crystallin family KM396_04805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_04810 PF00528 Binding-protein-dependent transport system inner membrane component KM396_04815 PF12911 N-terminal TM domain of oligopeptide transport permease C KM396_04815 PF00528 Binding-protein-dependent transport system inner membrane component KM396_04825 PF00005 ABC transporter KM396_04825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM396_04830 PF01541 GIY-YIG catalytic domain KM396_04860 PF00083 Sugar (and other) transporter KM396_04865 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM396_04865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_04870 PF08279 HTH domain KM396_04870 PF00072 Response regulator receiver domain KM396_04870 PF12431 Transcriptional regulator KM396_04875 PF03401 Tripartite tricarboxylate transporter family receptor KM396_04880 PF02342 TerD domain KM396_04905 PF06445 GyrI-like small molecule binding domain KM396_04905 PF13411 MerR HTH family regulatory protein KM396_04920 PF00772 DnaB-like helicase N terminal domain KM396_04920 PF03796 DnaB-like helicase C terminal domain KM396_04945 PF01925 Sulfite exporter TauE/SafE KM396_04960 PF07690 Major Facilitator Superfamily KM396_05005 PF07993 Male sterility protein KM396_05005 PF00550 Phosphopantetheine attachment site KM396_05010 PF18665 Tetracyclin repressor-like, C-terminal domain KM396_05010 PF00440 Bacterial regulatory proteins, tetR family KM396_05030 PF01066 CDP-alcohol phosphatidyltransferase KM396_05050 PF02733 Dak1 domain KM396_05060 PF02733 Dak1 domain KM396_05065 PF02525 Flavodoxin-like fold KM396_05070 PF02082 Transcriptional regulator KM396_05100 PF01966 HD domain KM396_05100 PF00672 HAMP domain KM396_05120 PF00395 S-layer homology domain KM396_05145 PF11181 Heat induced stress protein YflT KM396_05150 PF05532 CsbD-like KM396_05165 PF01740 STAS domain KM396_05170 PF13581 Histidine kinase-like ATPase domain KM396_05175 PF04539 Sigma-70 region 3 KM396_05175 PF04545 Sigma-70, region 4 KM396_05175 PF04542 Sigma-70 region 2 KM396_05185 PF07228 Stage II sporulation protein E (SpoIIE) KM396_05185 PF13426 PAS domain KM396_05190 PF01739 CheR methyltransferase, SAM binding domain KM396_05190 PF03705 CheR methyltransferase, all-alpha domain KM396_05195 PF00512 His Kinase A (phospho-acceptor) domain KM396_05195 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM396_05195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_05195 PF00072 Response regulator receiver domain KM396_05195 PF01627 Hpt domain KM396_05220 PF01906 Putative heavy-metal-binding KM396_05230 PF08240 Alcohol dehydrogenase GroES-like domain KM396_05230 PF00107 Zinc-binding dehydrogenase KM396_05235 PF11121 Protein of unknown function (DUF2639) KM396_05250 PF00149 Calcineurin-like phosphoesterase KM396_05255 PF13514 AAA domain KM396_05260 PF12323 Helix-turn-helix domain KM396_05260 PF01385 Probable transposase KM396_05260 PF07282 Putative transposase DNA-binding domain KM396_05270 PF01966 HD domain KM396_05270 PF01336 OB-fold nucleic acid binding domain KM396_05275 PF00440 Bacterial regulatory proteins, tetR family KM396_05280 PF07690 Major Facilitator Superfamily KM396_05285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM396_05290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM396_05295 PF18801 response regulator aspartate phosphatase H, N terminal KM396_05300 PF00561 alpha/beta hydrolase fold KM396_05300 PF08386 TAP-like protein KM396_05320 PF04309 Glycerol-3-phosphate responsive antiterminator KM396_05325 PF00230 Major intrinsic protein KM396_05330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM396_05330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM396_05335 PF01266 FAD dependent oxidoreductase KM396_05335 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KM396_05350 PF04542 Sigma-70 region 2 KM396_05350 PF08281 Sigma-70, region 4 KM396_05375 PF07690 Major Facilitator Superfamily KM396_05380 PF07690 Major Facilitator Superfamily KM396_05390 PF13538 UvrD-like helicase C-terminal domain KM396_05410 PF01047 MarR family KM396_05415 PF12732 YtxH-like protein KM396_05420 PF01230 HIT domain KM396_05425 PF00005 ABC transporter KM396_05430 PF05975 Bacterial ABC transporter protein EcsB KM396_05435 PF12787 EcsC protein family KM396_05445 PF17934 Tetracyclin repressor-like, C-terminal domain KM396_05445 PF00440 Bacterial regulatory proteins, tetR family KM396_05455 PF03703 Bacterial PH domain KM396_05505 PF03703 Bacterial PH domain KM396_05510 PF03703 Bacterial PH domain KM396_05515 PF03992 Antibiotic biosynthesis monooxygenase KM396_05520 PF00912 Transglycosylase KM396_05520 PF00905 Penicillin binding protein transpeptidase domain KM396_05525 PF01208 Uroporphyrinogen decarboxylase (URO-D) KM396_05530 PF00762 Ferrochelatase KM396_05535 PF01593 Flavin containing amine oxidoreductase KM396_05560 PF03965 Penicillinase repressor KM396_05570 PF17932 Tetracyclin repressor-like, C-terminal domain KM396_05570 PF00440 Bacterial regulatory proteins, tetR family KM396_05600 PF00356 Bacterial regulatory proteins, lacI family KM396_05605 PF14149 YhfH-like protein KM396_05610 PF12706 Beta-lactamase superfamily domain KM396_05615 PF03099 Biotin/lipoate A/B protein ligase family KM396_05615 PF10437 Bacterial lipoate protein ligase C-terminus KM396_05625 PF00501 AMP-binding enzyme KM396_05625 PF13193 AMP-binding enzyme C-terminal domain KM396_05635 PF00395 S-layer homology domain KM396_05635 PF01520 N-acetylmuramoyl-L-alanine amidase KM396_05655 PF05593 RHS Repeat KM396_05695 PF01966 HD domain KM396_05705 PF04542 Sigma-70 region 2 KM396_05705 PF08281 Sigma-70, region 4 KM396_05710 PF06445 GyrI-like small molecule binding domain KM396_05710 PF12833 Helix-turn-helix domain KM396_05725 PF00512 His Kinase A (phospho-acceptor) domain KM396_05725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_05730 PF00072 Response regulator receiver domain KM396_05730 PF00486 Transcriptional regulatory protein, C terminal KM396_05755 PF01435 Peptidase family M48 KM396_05755 PF16491 CAAX prenyl protease N-terminal, five membrane helices KM396_05760 PF00672 HAMP domain KM396_05760 PF02743 Cache domain KM396_05760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM396_05765 PF00892 EamA-like transporter family KM396_05770 PF00395 S-layer homology domain KM396_05770 PF00150 Cellulase (glycosyl hydrolase family 5) KM396_05770 PF03424 Carbohydrate binding domain (family 17/28) KM396_05780 PF00395 S-layer homology domain KM396_05785 PF01274 Malate synthase KM396_05790 PF00463 Isocitrate lyase family KM396_05800 PF00313 'Cold-shock' DNA-binding domain KM396_05815 PF06338 ComK protein KM396_05820 PF09335 SNARE associated Golgi protein KM396_05825 PF10502 Signal peptidase, peptidase S26 KM396_05830 PF13361 UvrD-like helicase C-terminal domain KM396_05830 PF12705 PD-(D/E)XK nuclease superfamily KM396_05835 PF12705 PD-(D/E)XK nuclease superfamily KM396_05835 PF00580 UvrD/REP helicase N-terminal domain KM396_05835 PF13361 UvrD-like helicase C-terminal domain KM396_05845 PF10676 Spore germination protein gerPA/gerPF KM396_05850 PF10970 Spore germination protein GerPE KM396_05860 PF10737 Spore germination protein GerPC KM396_05865 PF10803 Spore germination GerPB KM396_05870 PF10676 Spore germination protein gerPA/gerPF KM396_05880 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM396_05890 PF00202 Aminotransferase class-III KM396_05895 PF07457 Protein of unknown function (DUF1516) KM396_05905 PF00733 Asparagine synthase KM396_05905 PF13537 Glutamine amidotransferase domain KM396_05910 PF00762 Ferrochelatase KM396_05915 PF00199 Catalase KM396_05915 PF06628 Catalase-related immune-responsive KM396_05920 PF00909 Ammonium Transporter Family KM396_05925 PF00128 Alpha amylase, catalytic domain KM396_05935 PF04461 Protein of unknown function (DUF520) KM396_05940 PF13509 S1 domain KM396_05940 PF17783 CvfB-like winged helix domain KM396_05950 PF00639 PPIC-type PPIASE domain KM396_05960 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM396_05960 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM396_05965 PF12758 Protein of unknown function (DUF3813) KM396_05980 PF14168 YjzC-like protein KM396_05985 PF02861 Clp amino terminal domain, pathogenicity island component KM396_05985 PF10431 C-terminal, D2-small domain, of ClpB protein KM396_05985 PF17871 AAA lid domain KM396_05985 PF00004 ATPase family associated with various cellular activities (AAA) KM396_05985 PF07724 AAA domain (Cdc48 subfamily) KM396_06005 PF10815 ComZ KM396_06010 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM396_06010 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM396_06015 PF00109 Beta-ketoacyl synthase, N-terminal domain KM396_06015 PF02801 Beta-ketoacyl synthase, C-terminal domain KM396_06020 PF10026 Predicted Zn-dependent protease (DUF2268) KM396_06025 PF12227 Protein of unknown function (DUF3603) KM396_06030 PF00579 tRNA synthetases class I (W and Y) KM396_06040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_06045 PF00528 Binding-protein-dependent transport system inner membrane component KM396_06050 PF00528 Binding-protein-dependent transport system inner membrane component KM396_06050 PF12911 N-terminal TM domain of oligopeptide transport permease C KM396_06055 PF00005 ABC transporter KM396_06055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM396_06060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM396_06060 PF00005 ABC transporter KM396_06065 PF01554 MatE KM396_06070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_06080 PF03960 ArsC family KM396_06085 PF03741 Integral membrane protein TerC family KM396_06090 PF05389 Negative regulator of genetic competence (MecA) KM396_06095 PF13396 Phospholipase_D-nuclease N-terminal KM396_06095 PF13091 PLD-like domain KM396_06105 PF08439 Oligopeptidase F KM396_06105 PF01432 Peptidase family M3 KM396_06120 PF01152 Bacterial-like globin KM396_06125 PF01928 CYTH domain KM396_06135 PF04607 Region found in RelA / SpoT proteins KM396_06140 PF01513 ATP-NAD kinase KM396_06145 PF00849 RNA pseudouridylate synthase KM396_06155 PF00149 Calcineurin-like phosphoesterase KM396_06165 PF00535 Glycosyl transferase family 2 KM396_06170 PF08241 Methyltransferase domain KM396_06175 PF05711 Macrocin-O-methyltransferase (TylF) KM396_06185 PF00535 Glycosyl transferase family 2 KM396_06185 PF13181 Tetratricopeptide repeat KM396_06205 PF00483 Nucleotidyl transferase KM396_06210 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KM396_06215 PF16363 GDP-mannose 4,6 dehydratase KM396_06220 PF04321 RmlD substrate binding domain KM396_06240 PF07098 Protein of unknown function (DUF1360) KM396_06260 PF00580 UvrD/REP helicase N-terminal domain KM396_06260 PF13361 UvrD-like helicase C-terminal domain KM396_06265 PF13673 Acetyltransferase (GNAT) domain KM396_06275 PF00756 Putative esterase KM396_06290 PF02368 Bacterial Ig-like domain (group 2) KM396_06295 PF00474 Sodium:solute symporter family KM396_06300 PF04715 Anthranilate synthase component I, N terminal region KM396_06300 PF00425 chorismate binding enzyme KM396_06305 PF00117 Glutamine amidotransferase class-I KM396_06305 PF02885 Glycosyl transferase family, helical bundle domain KM396_06305 PF00591 Glycosyl transferase family, a/b domain KM396_06310 PF02885 Glycosyl transferase family, helical bundle domain KM396_06310 PF00591 Glycosyl transferase family, a/b domain KM396_06315 PF00218 Indole-3-glycerol phosphate synthase KM396_06320 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KM396_06325 PF00291 Pyridoxal-phosphate dependent enzyme KM396_06330 PF00290 Tryptophan synthase alpha chain KM396_06340 PF02652 L-lactate permease KM396_06345 PF10042 Uncharacterized conserved protein (DUF2278) KM396_06370 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_06370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM396_06400 PF02817 e3 binding domain KM396_06400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM396_06400 PF00364 Biotin-requiring enzyme KM396_06405 PF00676 Dehydrogenase E1 component KM396_06405 PF16870 2-oxoglutarate dehydrogenase C-terminal KM396_06405 PF02779 Transketolase, pyrimidine binding domain KM396_06410 PF01381 Helix-turn-helix KM396_06470 PF13649 Methyltransferase domain KM396_06480 PF07943 Penicillin-binding protein 5, C-terminal domain KM396_06480 PF00768 D-alanyl-D-alanine carboxypeptidase KM396_06490 PF12389 Camelysin metallo-endopeptidase KM396_06500 PF12389 Camelysin metallo-endopeptidase KM396_06505 PF01381 Helix-turn-helix KM396_06505 PF08671 Anti-repressor SinI KM396_06515 PF05547 Immune inhibitor A peptidase M6 KM396_06520 PF00171 Aldehyde dehydrogenase family KM396_06525 PF08402 TOBE domain KM396_06525 PF00005 ABC transporter KM396_06530 PF00528 Binding-protein-dependent transport system inner membrane component KM396_06535 PF00528 Binding-protein-dependent transport system inner membrane component KM396_06540 PF13416 Bacterial extracellular solute-binding protein KM396_06550 PF03176 MMPL family KM396_06560 PF01479 S4 domain KM396_06560 PF00849 RNA pseudouridylate synthase KM396_06570 PF00188 Cysteine-rich secretory protein family KM396_06575 PF13183 4Fe-4S dicluster domain KM396_06575 PF02754 Cysteine-rich domain KM396_06580 PF02913 FAD linked oxidases, C-terminal domain KM396_06580 PF01565 FAD binding domain KM396_06585 PF05651 Putative sugar diacid recognition KM396_06585 PF17853 GGDEF-like domain KM396_06585 PF13556 PucR C-terminal helix-turn-helix domain KM396_06595 PF00072 Response regulator receiver domain KM396_06595 PF00486 Transcriptional regulatory protein, C terminal KM396_06600 PF00512 His Kinase A (phospho-acceptor) domain KM396_06600 PF00672 HAMP domain KM396_06600 PF00989 PAS fold KM396_06600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_06600 PF18698 Histidine kinase sensor domain KM396_06605 PF07729 FCD domain KM396_06605 PF00392 Bacterial regulatory proteins, gntR family KM396_06610 PF02754 Cysteine-rich domain KM396_06615 PF02589 LUD domain KM396_06615 PF11870 Domain of unknown function (DUF3390) KM396_06615 PF13183 4Fe-4S dicluster domain KM396_06620 PF02589 LUD domain KM396_06625 PF06750 Bacterial Peptidase A24 N-terminal domain KM396_06625 PF01478 Type IV leader peptidase family KM396_06640 PF01226 Formate/nitrite transporter KM396_06645 PF03741 Integral membrane protein TerC family KM396_06650 PF02386 Cation transport protein KM396_06655 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM396_06660 PF01575 MaoC like domain KM396_06685 PF00561 alpha/beta hydrolase fold KM396_06690 PF01266 FAD dependent oxidoreductase KM396_06695 PF02386 Cation transport protein KM396_06725 PF13419 Haloacid dehalogenase-like hydrolase KM396_06730 PF00266 Aminotransferase class-V KM396_06740 PF08220 DeoR-like helix-turn-helix domain KM396_06740 PF00455 DeoR C terminal sensor domain KM396_06760 PF04748 Divergent polysaccharide deacetylase KM396_06765 PF09388 Spo0E like sporulation regulatory protein KM396_06770 PF02743 Cache domain KM396_06770 PF00512 His Kinase A (phospho-acceptor) domain KM396_06770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_06775 PF01047 MarR family KM396_06785 PF12867 DinB superfamily KM396_06790 PF13188 PAS domain KM396_06790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_06790 PF13426 PAS domain KM396_06790 PF00989 PAS fold KM396_06790 PF00512 His Kinase A (phospho-acceptor) domain KM396_06795 PF06508 Queuosine biosynthesis protein QueC KM396_06800 PF01242 6-pyruvoyl tetrahydropterin synthase KM396_06805 PF04055 Radical SAM superfamily KM396_06810 PF14489 QueF-like protein KM396_06815 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KM396_06845 PF07972 NrdI Flavodoxin like KM396_06865 PF00268 Ribonucleotide reductase, small chain KM396_06870 PF00392 Bacterial regulatory proteins, gntR family KM396_06875 PF00005 ABC transporter KM396_06885 PF00005 ABC transporter KM396_06905 PF01037 Lrp/AsnC ligand binding domain KM396_06915 PF00857 Isochorismatase family KM396_06925 PF17676 LD-carboxypeptidase C-terminal domain KM396_06925 PF02016 LD-carboxypeptidase N-terminal domain KM396_06930 PF03060 Nitronate monooxygenase KM396_06935 PF04914 DltD protein KM396_06940 PF00550 Phosphopantetheine attachment site KM396_06945 PF03062 MBOAT, membrane-bound O-acyltransferase family KM396_06950 PF00501 AMP-binding enzyme KM396_06950 PF13193 AMP-binding enzyme C-terminal domain KM396_06960 PF01546 Peptidase family M20/M25/M40 KM396_06960 PF07687 Peptidase dimerisation domain KM396_06970 PF00258 Flavodoxin KM396_06985 PF01636 Phosphotransferase enzyme family KM396_07005 PF01554 MatE KM396_07010 PF02673 Bacitracin resistance protein BacA KM396_07025 PF01047 MarR family KM396_07035 PF00375 Sodium:dicarboxylate symporter family KM396_07040 PF02386 Cation transport protein KM396_07050 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM396_07060 PF03698 Uncharacterised protein family (UPF0180) KM396_07075 PF01063 Amino-transferase class IV KM396_07080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM396_07080 PF00205 Thiamine pyrophosphate enzyme, central domain KM396_07080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM396_07085 PF01842 ACT domain KM396_07085 PF10369 Small subunit of acetolactate synthase KM396_07090 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM396_07090 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM396_07095 PF08502 LeuA allosteric (dimerisation) domain KM396_07095 PF00682 HMGL-like KM396_07100 PF00180 Isocitrate/isopropylmalate dehydrogenase KM396_07105 PF00330 Aconitase family (aconitate hydratase) KM396_07110 PF00694 Aconitase C-terminal domain KM396_07115 PF13393 Histidyl-tRNA synthetase KM396_07120 PF01634 ATP phosphoribosyltransferase KM396_07125 PF00815 Histidinol dehydrogenase KM396_07130 PF00475 Imidazoleglycerol-phosphate dehydratase KM396_07135 PF00117 Glutamine amidotransferase class-I KM396_07140 PF00977 Histidine biosynthesis protein KM396_07145 PF00977 Histidine biosynthesis protein KM396_07150 PF01502 Phosphoribosyl-AMP cyclohydrolase KM396_07155 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KM396_07160 PF02811 PHP domain KM396_07170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM396_07170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM396_07175 PF01066 CDP-alcohol phosphatidyltransferase KM396_07180 PF00884 Sulfatase KM396_07190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KM396_07190 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KM396_07200 PF01507 Phosphoadenosine phosphosulfate reductase family KM396_07205 PF01747 ATP-sulfurylase KM396_07205 PF14306 PUA-like domain KM396_07215 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM396_07215 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM396_07225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM396_07230 PF01903 CbiX KM396_07240 PF00209 Sodium:neurotransmitter symporter family KM396_07250 PF00375 Sodium:dicarboxylate symporter family KM396_07260 PF03553 Na+/H+ antiporter family KM396_07275 PF09922 Cell wall-active antibiotics response 4TMS YvqF KM396_07280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_07280 PF00672 HAMP domain KM396_07280 PF07730 Histidine kinase KM396_07285 PF00196 Bacterial regulatory proteins, luxR family KM396_07285 PF00072 Response regulator receiver domain KM396_07295 PF05525 Branched-chain amino acid transport protein KM396_07305 PF08241 Methyltransferase domain KM396_07330 PF00175 Oxidoreductase NAD-binding domain KM396_07330 PF00042 Globin KM396_07330 PF00970 Oxidoreductase FAD-binding domain KM396_07345 PF01925 Sulfite exporter TauE/SafE KM396_07350 PF01384 Phosphate transporter family KM396_07355 PF01865 Protein of unknown function DUF47 KM396_07360 PF00912 Transglycosylase KM396_07360 PF00905 Penicillin binding protein transpeptidase domain KM396_07375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_07375 PF00989 PAS fold KM396_07375 PF00512 His Kinase A (phospho-acceptor) domain KM396_07380 PF01904 Protein of unknown function DUF72 KM396_07390 PF00589 Phage integrase family KM396_07395 PF00989 PAS fold KM396_07395 PF00512 His Kinase A (phospho-acceptor) domain KM396_07395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_07395 PF16736 Single Cache-like KM396_07400 PF01048 Phosphorylase superfamily KM396_07415 PF09924 Uncharacterised conserved protein (DUF2156) KM396_07415 PF03706 Lysylphosphatidylglycerol synthase TM region KM396_07430 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM396_07430 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM396_07435 PF07943 Penicillin-binding protein 5, C-terminal domain KM396_07435 PF00768 D-alanyl-D-alanine carboxypeptidase KM396_07440 PF07670 Nucleoside recognition KM396_07445 PF07670 Nucleoside recognition KM396_07450 PF00849 RNA pseudouridylate synthase KM396_07450 PF01479 S4 domain KM396_07455 PF00578 AhpC/TSA family KM396_07460 PF05140 ResB-like family KM396_07465 PF01578 Cytochrome C assembly protein KM396_07470 PF00072 Response regulator receiver domain KM396_07470 PF00486 Transcriptional regulatory protein, C terminal KM396_07475 PF18698 Histidine kinase sensor domain KM396_07475 PF00512 His Kinase A (phospho-acceptor) domain KM396_07475 PF00989 PAS fold KM396_07475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_07475 PF00672 HAMP domain KM396_07480 PF01923 Cobalamin adenosyltransferase KM396_07495 PF12822 ECF transporter, substrate-specific component KM396_07505 PF14493 Helix-turn-helix domain KM396_07510 PF00271 Helicase conserved C-terminal domain KM396_07510 PF00270 DEAD/DEAH box helicase KM396_07515 PF02517 CPBP intramembrane metalloprotease KM396_07530 PF02310 B12 binding domain KM396_07530 PF02607 B12 binding domain KM396_07530 PF13411 MerR HTH family regulatory protein KM396_07535 PF05389 Negative regulator of genetic competence (MecA) KM396_07540 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM396_07540 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM396_07565 PF00710 Asparaginase, N-terminal KM396_07565 PF17763 Glutaminase/Asparaginase C-terminal domain KM396_07575 PF02224 Cytidylate kinase KM396_07580 PF00575 S1 RNA binding domain KM396_07585 PF01070 FMN-dependent dehydrogenase KM396_07590 PF14140 YpzI-like protein KM396_07600 PF14045 YIEGIA protein KM396_07610 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KM396_07610 PF01926 50S ribosome-binding GTPase KM396_07615 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KM396_07615 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KM396_07625 PF10966 Protein of unknown function (DUF2768) KM396_07635 PF09547 Stage IV sporulation protein A (spore_IV_A) KM396_07640 PF00216 Bacterial DNA-binding protein KM396_07645 PF01227 GTP cyclohydrolase I KM396_07650 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KM396_07655 PF01209 ubiE/COQ5 methyltransferase family KM396_07660 PF00348 Polyprenyl synthetase KM396_07665 PF00334 Nucleoside diphosphate kinase KM396_07670 PF01264 Chorismate synthase KM396_07675 PF01761 3-dehydroquinate synthase KM396_07680 PF00155 Aminotransferase class I and II KM396_07690 PF08858 IDEAL domain KM396_07690 PF08864 UPF0302 domain KM396_07695 PF10673 Protein of unknown function (DUF2487) KM396_07700 PF00355 Rieske [2Fe-2S] domain KM396_07705 PF00033 Cytochrome b/b6/petB KM396_07710 PF00032 Cytochrome b(C-terminal)/b6/petD KM396_07710 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM396_07715 PF07187 Protein of unknown function (DUF1405) KM396_07725 PF09577 Sporulation protein YpjB (SpoYpjB) KM396_07730 PF04298 Putative neutral zinc metallopeptidase KM396_07740 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM396_07740 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM396_07745 PF03819 MazG nucleotide pyrophosphohydrolase domain KM396_07750 PF05173 Dihydrodipicolinate reductase, C-terminus KM396_07750 PF01113 Dihydrodipicolinate reductase, N-terminus KM396_07755 PF02142 MGS-like domain KM396_07760 PF02585 GlcNAc-PI de-N-acetylase KM396_07765 PF13439 Glycosyltransferase Family 4 KM396_07765 PF00534 Glycosyl transferases group 1 KM396_07770 PF13735 tRNA nucleotidyltransferase domain 2 putative KM396_07770 PF12627 Probable RNA and SrmB- binding site of polymerase A KM396_07770 PF01743 Poly A polymerase head domain KM396_07775 PF02237 Biotin protein ligase C terminal domain KM396_07775 PF03099 Biotin/lipoate A/B protein ligase family KM396_07775 PF08279 HTH domain KM396_07785 PF02548 Ketopantoate hydroxymethyltransferase KM396_07790 PF02569 Pantoate-beta-alanine ligase KM396_07795 PF02261 Aspartate decarboxylase KM396_07800 PF13307 Helicase C-terminal domain KM396_07800 PF04851 Type III restriction enzyme, res subunit KM396_07800 PF00929 Exonuclease KM396_07805 PF14084 Protein of unknown function (DUF4264) KM396_07815 PF00155 Aminotransferase class I and II KM396_07820 PF07261 Replication initiation and membrane attachment KM396_07825 PF00633 Helix-hairpin-helix motif KM396_07825 PF00730 HhH-GPD superfamily base excision DNA repair protein KM396_07825 PF10576 Iron-sulfur binding domain of endonuclease III KM396_07835 PF00905 Penicillin binding protein transpeptidase domain KM396_07835 PF00912 Transglycosylase KM396_07840 PF03838 Recombination protein U KM396_07845 PF10720 Protein of unknown function (DUF2515) KM396_07880 PF06908 YspA SLOG family KM396_07885 PF05103 DivIVA protein KM396_07895 PF01170 Putative RNA methylase family UPF0020 KM396_07895 PF02926 THUMP domain KM396_07905 PF13307 Helicase C-terminal domain KM396_07910 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KM396_07920 PF01636 Phosphotransferase enzyme family KM396_07925 PF00557 Metallopeptidase family M24 KM396_07930 PF00156 Phosphoribosyl transferase domain KM396_07935 PF00860 Permease family KM396_07940 PF04235 Protein of unknown function (DUF418) KM396_07945 PF00350 Dynamin family KM396_07955 PF00583 Acetyltransferase (GNAT) family KM396_07960 PF10752 Protein of unknown function (DUF2533) KM396_07965 PF00581 Rhodanese-like domain KM396_08000 PF00689 Cation transporting ATPase, C-terminus KM396_08000 PF00690 Cation transporter/ATPase, N-terminus KM396_08005 PF01367 5'-3' exonuclease, C-terminal SAM fold KM396_08005 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM396_08030 PF02397 Bacterial sugar transferase KM396_08045 PF00535 Glycosyl transferase family 2 KM396_08050 PF13439 Glycosyltransferase Family 4 KM396_08050 PF00534 Glycosyl transferases group 1 KM396_08065 PF13673 Acetyltransferase (GNAT) domain KM396_08065 PF18014 Acetyltransferase (GNAT) domain KM396_08085 PF13456 Reverse transcriptase-like KM396_08090 PF01263 Aldose 1-epimerase KM396_08115 PF00313 'Cold-shock' DNA-binding domain KM396_08125 PF01810 LysE type translocator KM396_08140 PF04341 Protein of unknown function, DUF485 KM396_08150 PF00202 Aminotransferase class-III KM396_08160 PF00999 Sodium/hydrogen exchanger family KM396_08165 PF17770 Ribonuclease J C-terminal domain KM396_08165 PF00753 Metallo-beta-lactamase superfamily KM396_08165 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM396_08170 PF06445 GyrI-like small molecule binding domain KM396_08170 PF13411 MerR HTH family regulatory protein KM396_08180 PF04239 Protein of unknown function (DUF421) KM396_08185 PF02698 DUF218 domain KM396_08195 PF00881 Nitroreductase family KM396_08240 PF17209 Hfq protein KM396_08250 PF01618 MotA/TolQ/ExbB proton channel family KM396_08255 PF13677 Membrane MotB of proton-channel complex MotA/MotB KM396_08255 PF00691 OmpA family KM396_08260 PF00072 Response regulator receiver domain KM396_08265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_08265 PF02895 Signal transducing histidine kinase, homodimeric domain KM396_08265 PF01627 Hpt domain KM396_08265 PF07194 P2 response regulator binding domain KM396_08265 PF01584 CheW-like domain KM396_08270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_08270 PF01584 CheW-like domain KM396_08270 PF02895 Signal transducing histidine kinase, homodimeric domain KM396_08270 PF01627 Hpt domain KM396_08270 PF07194 P2 response regulator binding domain KM396_08275 PF04509 CheC-like family KM396_08275 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM396_08290 PF01739 CheR methyltransferase, SAM binding domain KM396_08290 PF03705 CheR methyltransferase, all-alpha domain KM396_08310 PF00460 Flagella basal body rod protein KM396_08310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM396_08335 PF00460 Flagella basal body rod protein KM396_08340 PF00460 Flagella basal body rod protein KM396_08340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM396_08345 PF02049 Flagellar hook-basal body complex protein FliE KM396_08355 PF14841 FliG middle domain KM396_08355 PF14842 FliG N-terminal domain KM396_08355 PF01706 FliG C-terminal domain KM396_08365 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM396_08365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM396_08365 PF18269 T3SS EscN ATPase C-terminal domain KM396_08390 PF07559 Flagellar basal body protein FlaE KM396_08390 PF00460 Flagella basal body rod protein KM396_08390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM396_08405 PF01584 CheW-like domain KM396_08405 PF00072 Response regulator receiver domain KM396_08410 PF12181 DNA binding domain of the motility gene repressor (MogR) KM396_08415 PF00535 Glycosyl transferase family 2 KM396_08450 PF00669 Bacterial flagellin N-terminal helical region KM396_08450 PF00700 Bacterial flagellin C-terminal helical region KM396_08455 PF01464 Transglycosylase SLT domain KM396_08470 PF04509 CheC-like family KM396_08470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM396_08480 PF00813 FliP family KM396_08485 PF01313 Bacterial export proteins, family 3 KM396_08495 PF01312 FlhB HrpN YscU SpaS Family KM396_08500 PF00771 FHIPEP family KM396_08510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM396_08510 PF00460 Flagella basal body rod protein KM396_08515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM396_08515 PF02272 DHHA1 domain KM396_08515 PF01411 tRNA synthetases class II (A) KM396_08540 PF00440 Bacterial regulatory proteins, tetR family KM396_08540 PF17932 Tetracyclin repressor-like, C-terminal domain KM396_08545 PF17329 Family of unknown function (DUF5367) KM396_08560 PF03992 Antibiotic biosynthesis monooxygenase KM396_08565 PF08141 Small acid-soluble spore protein H family KM396_08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM396_08585 PF03466 LysR substrate binding domain KM396_08590 PF08402 TOBE domain KM396_08590 PF00005 ABC transporter KM396_08600 PF00528 Binding-protein-dependent transport system inner membrane component KM396_08605 PF00753 Metallo-beta-lactamase superfamily KM396_08605 PF12706 Beta-lactamase superfamily domain KM396_08615 PF10787 Uncharacterised protein from bacillus cereus group KM396_08630 PF00768 D-alanyl-D-alanine carboxypeptidase KM396_08630 PF07943 Penicillin-binding protein 5, C-terminal domain KM396_08640 PF00300 Histidine phosphatase superfamily (branch 1) KM396_08670 PF13537 Glutamine amidotransferase domain KM396_08670 PF00733 Asparagine synthase KM396_08690 PF01545 Cation efflux family KM396_08690 PF16916 Dimerisation domain of Zinc Transporter KM396_08700 PF00392 Bacterial regulatory proteins, gntR family KM396_08700 PF07729 FCD domain KM396_08705 PF00892 EamA-like transporter family KM396_08710 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM396_08710 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM396_08715 PF03773 Predicted permease KM396_08725 PF00535 Glycosyl transferase family 2 KM396_08730 PF03553 Na+/H+ antiporter family KM396_08735 PF10415 Fumarase C C-terminus KM396_08735 PF00206 Lyase KM396_08760 PF03575 Peptidase family S51 KM396_08780 PF02683 Cytochrome C biogenesis protein transmembrane region KM396_08785 PF00578 AhpC/TSA family KM396_08805 PF00291 Pyridoxal-phosphate dependent enzyme KM396_08810 PF04286 Protein of unknown function (DUF445) KM396_08835 PF00072 Response regulator receiver domain KM396_08835 PF00196 Bacterial regulatory proteins, luxR family KM396_08840 PF07730 Histidine kinase KM396_08840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_08840 PF13492 GAF domain KM396_08840 PF13185 GAF domain KM396_08845 PF00005 ABC transporter KM396_08860 PF13091 PLD-like domain KM396_08865 PF00696 Amino acid kinase family KM396_08870 PF00375 Sodium:dicarboxylate symporter family KM396_08875 PF00206 Lyase KM396_08875 PF10415 Fumarase C C-terminus KM396_08880 PF03949 Malic enzyme, NAD binding domain KM396_08880 PF00390 Malic enzyme, N-terminal domain KM396_08885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_08890 PF00072 Response regulator receiver domain KM396_08890 PF08664 YcbB domain KM396_08895 PF00271 Helicase conserved C-terminal domain KM396_08895 PF04434 SWIM zinc finger KM396_08895 PF00176 SNF2 family N-terminal domain KM396_08910 PF03590 Aspartate-ammonia ligase KM396_08930 PF13840 ACT domain KM396_08930 PF00696 Amino acid kinase family KM396_08940 PF13761 Domain of unknown function (DUF4166) KM396_08945 PF14158 YndJ-like protein KM396_08950 PF00293 NUDIX domain KM396_08955 PF13205 Bacterial Ig-like domain KM396_08955 PF00395 S-layer homology domain KM396_08955 PF02368 Bacterial Ig-like domain (group 2) KM396_08965 PF07690 Major Facilitator Superfamily KM396_08980 PF02554 Carbon starvation protein CstA KM396_08985 PF03976 Polyphosphate kinase 2 (PPK2) KM396_08995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM396_08995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM396_09005 PF16360 GTP-binding GTPase Middle Region KM396_09005 PF01926 50S ribosome-binding GTPase KM396_09005 PF13167 GTP-binding GTPase N-terminal KM396_09015 PF07690 Major Facilitator Superfamily KM396_09020 PF00291 Pyridoxal-phosphate dependent enzyme KM396_09035 PF14667 Polysaccharide biosynthesis C-terminal domain KM396_09035 PF01943 Polysaccharide biosynthesis protein KM396_09040 PF00209 Sodium:neurotransmitter symporter family KM396_09045 PF01522 Polysaccharide deacetylase KM396_09045 PF03422 Carbohydrate binding module (family 6) KM396_09045 PF00457 Glycosyl hydrolases family 11 KM396_09055 PF04239 Protein of unknown function (DUF421) KM396_09070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM396_09070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM396_09085 PF01625 Peptide methionine sulfoxide reductase KM396_09095 PF01063 Amino-transferase class IV KM396_09100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM396_09100 PF00205 Thiamine pyrophosphate enzyme, central domain KM396_09100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM396_09105 PF10369 Small subunit of acetolactate synthase KM396_09110 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM396_09110 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM396_09115 PF00920 Dehydratase family KM396_09120 PF00291 Pyridoxal-phosphate dependent enzyme KM396_09120 PF00585 C-terminal regulatory domain of Threonine dehydratase KM396_09145 PF07690 Major Facilitator Superfamily KM396_09150 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KM396_09160 PF04397 LytTr DNA-binding domain KM396_09160 PF00072 Response regulator receiver domain KM396_09165 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KM396_09165 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KM396_09180 PF01979 Amidohydrolase family KM396_09185 PF13026 Protein of unknown function (DUF3887) KM396_09185 PF12146 Serine aminopeptidase, S33 KM396_09215 PF13186 Iron-sulfur cluster-binding domain KM396_09215 PF04055 Radical SAM superfamily KM396_09220 PF13302 Acetyltransferase (GNAT) domain KM396_09225 PF00072 Response regulator receiver domain KM396_09225 PF00486 Transcriptional regulatory protein, C terminal KM396_09240 PF01566 Natural resistance-associated macrophage protein KM396_09245 PF00581 Rhodanese-like domain KM396_09245 PF12368 Rhodanase C-terminal KM396_09245 PF17773 UPF0176 acylphosphatase like domain KM396_09255 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM396_09255 PF02558 Ketopantoate reductase PanE/ApbA KM396_09270 PF05791 Bacillus haemolytic enterotoxin (HBL) KM396_09285 PF04198 Putative sugar-binding domain KM396_09290 PF01791 DeoC/LacD family aldolase KM396_09295 PF01773 Na+ dependent nucleoside transporter N-terminus KM396_09295 PF07662 Na+ dependent nucleoside transporter C-terminus KM396_09300 PF02885 Glycosyl transferase family, helical bundle domain KM396_09300 PF00591 Glycosyl transferase family, a/b domain KM396_09300 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM396_09305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM396_09315 PF05979 Bacterial protein of unknown function (DUF896) KM396_09335 PF05195 Aminopeptidase P, N-terminal domain KM396_09335 PF00557 Metallopeptidase family M24 KM396_09340 PF07731 Multicopper oxidase KM396_09340 PF07732 Multicopper oxidase KM396_09345 PF01551 Peptidase family M23 KM396_09355 PF01396 Topoisomerase DNA binding C4 zinc finger KM396_09355 PF13342 C-terminal repeat of topoisomerase KM396_09355 PF01751 Toprim domain KM396_09355 PF01131 DNA topoisomerase KM396_09370 PF02525 Flavodoxin-like fold KM396_09385 PF04234 CopC domain KM396_09385 PF05425 Copper resistance protein D KM396_09385 PF13115 YtkA-like KM396_09390 PF07987 Domain of unkown function (DUF1775) KM396_09400 PF00892 EamA-like transporter family KM396_09405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM396_09405 PF03466 LysR substrate binding domain KM396_09410 PF02082 Transcriptional regulator KM396_09415 PF01323 DSBA-like thioredoxin domain KM396_09420 PF00881 Nitroreductase family KM396_09425 PF01425 Amidase KM396_09430 PF01594 AI-2E family transporter KM396_09435 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM396_09435 PF00056 lactate/malate dehydrogenase, NAD binding domain KM396_09440 PF01593 Flavin containing amine oxidoreductase KM396_09445 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM396_09445 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM396_09460 PF00501 AMP-binding enzyme KM396_09460 PF13193 AMP-binding enzyme C-terminal domain KM396_09465 PF01575 MaoC like domain KM396_09470 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM396_09470 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM396_09480 PF00005 ABC transporter KM396_09480 PF12399 Branched-chain amino acid ATP-binding cassette transporter KM396_09485 PF00005 ABC transporter KM396_09490 PF02653 Branched-chain amino acid transport system / permease component KM396_09500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM396_09500 PF03466 LysR substrate binding domain KM396_09510 PF14552 Tautomerase enzyme KM396_09520 PF01047 MarR family KM396_09530 PF01654 Cytochrome bd terminal oxidase subunit I KM396_09535 PF02322 Cytochrome bd terminal oxidase subunit II KM396_09540 PF00664 ABC transporter transmembrane region KM396_09540 PF00005 ABC transporter KM396_09545 PF00664 ABC transporter transmembrane region KM396_09545 PF00005 ABC transporter KM396_09560 PF02016 LD-carboxypeptidase N-terminal domain KM396_09560 PF17676 LD-carboxypeptidase C-terminal domain KM396_09565 PF00768 D-alanyl-D-alanine carboxypeptidase KM396_09565 PF07943 Penicillin-binding protein 5, C-terminal domain KM396_09580 PF01476 LysM domain KM396_09580 PF00877 NlpC/P60 family KM396_09595 PF00072 Response regulator receiver domain KM396_09595 PF00486 Transcriptional regulatory protein, C terminal KM396_09600 PF16736 Single Cache-like KM396_09600 PF00989 PAS fold KM396_09600 PF00512 His Kinase A (phospho-acceptor) domain KM396_09600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_09610 PF00106 short chain dehydrogenase KM396_09620 PF04439 Streptomycin adenylyltransferase KM396_09625 PF01522 Polysaccharide deacetylase KM396_09645 PF01842 ACT domain KM396_09645 PF00742 Homoserine dehydrogenase KM396_09645 PF03447 Homoserine dehydrogenase, NAD binding domain KM396_09650 PF00291 Pyridoxal-phosphate dependent enzyme KM396_09655 PF00288 GHMP kinases N terminal domain KM396_09655 PF08544 GHMP kinases C terminal KM396_09670 PF03816 Cell envelope-related transcriptional attenuator domain KM396_09680 PF00486 Transcriptional regulatory protein, C terminal KM396_09680 PF00072 Response regulator receiver domain KM396_09685 PF00989 PAS fold KM396_09685 PF16736 Single Cache-like KM396_09685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_09685 PF00512 His Kinase A (phospho-acceptor) domain KM396_09690 PF01522 Polysaccharide deacetylase KM396_09700 PF02308 MgtC family KM396_09705 PF00583 Acetyltransferase (GNAT) family KM396_09710 PF06276 Ferric iron reductase FhuF-like transporter KM396_09710 PF04183 IucA / IucC family KM396_09715 PF06276 Ferric iron reductase FhuF-like transporter KM396_09715 PF04183 IucA / IucC family KM396_09720 PF00501 AMP-binding enzyme KM396_09720 PF13193 AMP-binding enzyme C-terminal domain KM396_09735 PF01261 Xylose isomerase-like TIM barrel KM396_09740 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM396_09750 PF01810 LysE type translocator KM396_09760 PF01734 Patatin-like phospholipase KM396_09785 PF00293 NUDIX domain KM396_09785 PF13344 Haloacid dehalogenase-like hydrolase KM396_09790 PF02540 NAD synthase KM396_09800 PF18277 AbrB C-terminal domain KM396_09800 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM396_09805 PF00082 Subtilase family KM396_09810 PF01022 Bacterial regulatory protein, arsR family KM396_09815 PF00248 Aldo/keto reductase family KM396_09820 PF07690 Major Facilitator Superfamily KM396_09840 PF03193 RsgA GTPase KM396_09845 PF02743 Cache domain KM396_09845 PF00672 HAMP domain KM396_09845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM396_09865 PF00210 Ferritin-like domain KM396_09880 PF00296 Luciferase-like monooxygenase KM396_09890 PF01593 Flavin containing amine oxidoreductase KM396_09900 PF00248 Aldo/keto reductase family KM396_09905 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM396_09905 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM396_09910 PF00583 Acetyltransferase (GNAT) family KM396_09965 PF01297 Zinc-uptake complex component A periplasmic KM396_09965 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM396_09975 PF13460 NAD(P)H-binding KM396_09980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM396_09985 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM396_09985 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM396_09995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_10000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM396_10010 PF00300 Histidine phosphatase superfamily (branch 1) KM396_10020 PF08757 CotH kinase protein KM396_10025 PF00293 NUDIX domain KM396_10030 PF09335 SNARE associated Golgi protein KM396_10035 PF14667 Polysaccharide biosynthesis C-terminal domain KM396_10035 PF01943 Polysaccharide biosynthesis protein KM396_10045 PF03773 Predicted permease KM396_10050 PF09323 Domain of unknown function (DUF1980) KM396_10055 PF03061 Thioesterase superfamily KM396_10065 PF13091 PLD-like domain KM396_10065 PF13396 Phospholipase_D-nuclease N-terminal KM396_10080 PF13460 NAD(P)H-binding KM396_10085 PF04306 Protein of unknown function (DUF456) KM396_10090 PF03471 Transporter associated domain KM396_10090 PF01595 Cyclin M transmembrane N-terminal domain KM396_10090 PF00571 CBS domain KM396_10105 PF05525 Branched-chain amino acid transport protein KM396_10110 PF01588 Putative tRNA binding domain KM396_10130 PF07454 Stage II sporulation protein P (SpoIIP) KM396_10140 PF02557 D-alanyl-D-alanine carboxypeptidase KM396_10150 PF01425 Amidase KM396_10155 PF07690 Major Facilitator Superfamily KM396_10165 PF01145 SPFH domain / Band 7 family KM396_10170 PF00300 Histidine phosphatase superfamily (branch 1) KM396_10185 PF01168 Alanine racemase, N-terminal domain KM396_10185 PF00842 Alanine racemase, C-terminal domain KM396_10190 PF13847 Methyltransferase domain KM396_10205 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM396_10210 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM396_10210 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM396_10215 PF00155 Aminotransferase class I and II KM396_10215 PF00392 Bacterial regulatory proteins, gntR family KM396_10240 PF00583 Acetyltransferase (GNAT) family KM396_10290 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM396_10315 PF01209 ubiE/COQ5 methyltransferase family KM396_10320 PF01268 Formate--tetrahydrofolate ligase KM396_10330 PF00271 Helicase conserved C-terminal domain KM396_10330 PF00270 DEAD/DEAH box helicase KM396_10340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM396_10350 PF08240 Alcohol dehydrogenase GroES-like domain KM396_10350 PF00107 Zinc-binding dehydrogenase KM396_10355 PF04542 Sigma-70 region 2 KM396_10355 PF08281 Sigma-70, region 4 KM396_10380 PF00255 Glutathione peroxidase KM396_10385 PF11992 Domain of unknown function (DUF3488) KM396_10385 PF01841 Transglutaminase-like superfamily KM396_10385 PF13559 Domain of unknown function (DUF4129) KM396_10390 PF01882 Protein of unknown function DUF58 KM396_10395 PF07726 ATPase family associated with various cellular activities (AAA) KM396_10395 PF17863 AAA lid domain KM396_10410 PF01568 Molydopterin dinucleotide binding domain KM396_10410 PF00384 Molybdopterin oxidoreductase KM396_10410 PF14710 Respiratory nitrate reductase alpha N-terminal KM396_10415 PF13247 4Fe-4S dicluster domain KM396_10415 PF14711 Respiratory nitrate reductase beta C-terminal KM396_10420 PF02613 Nitrate reductase delta subunit KM396_10425 PF02665 Nitrate reductase gamma subunit KM396_10430 PF00155 Aminotransferase class I and II KM396_10430 PF00392 Bacterial regulatory proteins, gntR family KM396_10435 PF00005 ABC transporter KM396_10445 PF00027 Cyclic nucleotide-binding domain KM396_10445 PF00325 Bacterial regulatory proteins, crp family KM396_10450 PF06463 Molybdenum Cofactor Synthesis C KM396_10450 PF04055 Radical SAM superfamily KM396_10455 PF00899 ThiF family KM396_10460 PF00994 Probable molybdopterin binding domain KM396_10460 PF03454 MoeA C-terminal region (domain IV) KM396_10460 PF03453 MoeA N-terminal region (domain I and II) KM396_10465 PF02391 MoaE protein KM396_10475 PF07690 Major Facilitator Superfamily KM396_10495 PF01903 CbiX KM396_10500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM396_10505 PF00355 Rieske [2Fe-2S] domain KM396_10510 PF04324 BFD-like [2Fe-2S] binding domain KM396_10510 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM396_10510 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_10510 PF18267 Rubredoxin NAD+ reductase C-terminal domain KM396_10510 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM396_10515 PF04405 Domain of Unknown function (DUF542) KM396_10515 PF01814 Hemerythrin HHE cation binding domain KM396_10550 PF04232 Stage V sporulation protein S (SpoVS) KM396_10565 PF01510 N-acetylmuramoyl-L-alanine amidase KM396_10580 PF01966 HD domain KM396_10585 PF16326 ABC transporter C-terminal domain KM396_10585 PF12848 ABC transporter KM396_10585 PF00005 ABC transporter KM396_10600 PF00436 Single-strand binding protein family KM396_10605 PF00440 Bacterial regulatory proteins, tetR family KM396_10615 PF08712 Scaffold protein Nfu/NifU N terminal KM396_10615 PF13769 Virulence factor KM396_10625 PF06491 Disulphide isomerase KM396_10630 PF04445 Putative SAM-dependent methyltransferase KM396_10635 PF00750 tRNA synthetases class I (R) KM396_10635 PF03485 Arginyl tRNA synthetase N terminal domain KM396_10635 PF05746 DALR anticodon binding domain KM396_10660 PF08264 Anticodon-binding domain of tRNA KM396_10660 PF00133 tRNA synthetases class I (I, L, M and V) KM396_10680 PF00152 tRNA synthetases class II (D, K and N) KM396_10680 PF01336 OB-fold nucleic acid binding domain KM396_10700 PF01580 FtsK/SpoIIIE family KM396_10700 PF12538 DNA transporter KM396_10770 PF02595 Glycerate kinase family KM396_10775 PF00939 Sodium:sulfate symporter transmembrane region KM396_10780 PF00486 Transcriptional regulatory protein, C terminal KM396_10780 PF00072 Response regulator receiver domain KM396_10785 PF00512 His Kinase A (phospho-acceptor) domain KM396_10785 PF00672 HAMP domain KM396_10785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_10800 PF00209 Sodium:neurotransmitter symporter family KM396_10815 PF10997 Alternate to MurJ KM396_10820 PF13419 Haloacid dehalogenase-like hydrolase KM396_10830 PF00465 Iron-containing alcohol dehydrogenase KM396_10835 PF01177 Asp/Glu/Hydantoin racemase KM396_10840 PF01980 tRNA-methyltransferase O KM396_10845 PF00583 Acetyltransferase (GNAT) family KM396_10860 PF00005 ABC transporter KM396_10870 PF14005 YpjP-like protein KM396_10875 PF13419 Haloacid dehalogenase-like hydrolase KM396_10895 PF00144 Beta-lactamase KM396_10895 PF07930 D-aminopeptidase, domain B KM396_10900 PF00303 Thymidylate synthase KM396_10905 PF00186 Dihydrofolate reductase KM396_10910 PF00905 Penicillin binding protein transpeptidase domain KM396_10910 PF05223 NTF2-like N-terminal transpeptidase domain KM396_10910 PF03717 Penicillin-binding Protein dimerisation domain KM396_10915 PF02525 Flavodoxin-like fold KM396_10920 PF01553 Acyltransferase KM396_10925 PF03006 Haemolysin-III related KM396_10930 PF02416 mttA/Hcf106 family KM396_10935 PF00902 Sec-independent protein translocase protein (TatC) KM396_10945 PF02645 Uncharacterised protein, DegV family COG1307 KM396_10955 PF02630 SCO1/SenC KM396_10960 PF00011 Hsp20/alpha crystallin family KM396_10965 PF13537 Glutamine amidotransferase domain KM396_10965 PF00733 Asparagine synthase KM396_10980 PF01497 Periplasmic binding protein KM396_10985 PF01063 Amino-transferase class IV KM396_10990 PF00881 Nitroreductase family KM396_11010 PF00293 NUDIX domain KM396_11015 PF00011 Hsp20/alpha crystallin family KM396_11020 PF00924 Mechanosensitive ion channel KM396_11025 PF13185 GAF domain KM396_11025 PF07730 Histidine kinase KM396_11030 PF00196 Bacterial regulatory proteins, luxR family KM396_11030 PF00072 Response regulator receiver domain KM396_11040 PF08240 Alcohol dehydrogenase GroES-like domain KM396_11040 PF00107 Zinc-binding dehydrogenase KM396_11065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM396_11065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM396_11070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM396_11070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM396_11085 PF03358 NADPH-dependent FMN reductase KM396_11100 PF00005 ABC transporter KM396_11100 PF00571 CBS domain KM396_11105 PF00528 Binding-protein-dependent transport system inner membrane component KM396_11110 PF13520 Amino acid permease KM396_11140 PF03471 Transporter associated domain KM396_11140 PF01595 Cyclin M transmembrane N-terminal domain KM396_11140 PF00571 CBS domain KM396_11145 PF00171 Aldehyde dehydrogenase family KM396_11150 PF07997 Protein of unknown function (DUF1694) KM396_11155 PF09385 Histidine kinase N terminal KM396_11165 PF00202 Aminotransferase class-III KM396_11170 PF01144 Coenzyme A transferase KM396_11175 PF01144 Coenzyme A transferase KM396_11180 PF07687 Peptidase dimerisation domain KM396_11180 PF01546 Peptidase family M20/M25/M40 KM396_11185 PF00583 Acetyltransferase (GNAT) family KM396_11190 PF13426 PAS domain KM396_11190 PF02954 Bacterial regulatory protein, Fis family KM396_11190 PF00158 Sigma-54 interaction domain KM396_11195 PF12544 Lysine-2,3-aminomutase KM396_11200 PF14122 YokU-like protein, putative antitoxin KM396_11205 PF06855 YozE SAM-like fold KM396_11220 PF14162 YozD-like protein KM396_11235 PF07070 SpoOM protein KM396_11245 PF16916 Dimerisation domain of Zinc Transporter KM396_11245 PF01545 Cation efflux family KM396_11250 PF00085 Thioredoxin KM396_11265 PF04740 LXG domain of WXG superfamily KM396_11265 PF14436 Bacterial EndoU nuclease KM396_11270 PF03424 Carbohydrate binding domain (family 17/28) KM396_11270 PF00395 S-layer homology domain KM396_11270 PF00150 Cellulase (glycosyl hydrolase family 5) KM396_11280 PF04471 Restriction endonuclease KM396_11390 PF10676 Spore germination protein gerPA/gerPF KM396_11410 PF00912 Transglycosylase KM396_11410 PF00905 Penicillin binding protein transpeptidase domain KM396_11415 PF07690 Major Facilitator Superfamily KM396_11420 PF01521 Iron-sulphur cluster biosynthesis KM396_11425 PF00285 Citrate synthase, C-terminal domain KM396_11430 PF03972 MmgE/PrpD family KM396_11440 PF02770 Acyl-CoA dehydrogenase, middle domain KM396_11440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM396_11440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM396_11445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM396_11445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM396_11450 PF00171 Aldehyde dehydrogenase family KM396_11455 PF01810 LysE type translocator KM396_11460 PF00378 Enoyl-CoA hydratase/isomerase KM396_11470 PF10763 Protein of unknown function (DUF2584) KM396_11475 PF12320 Type 5 capsule protein repressor C-terminal domain KM396_11475 PF00149 Calcineurin-like phosphoesterase KM396_11480 PF13476 AAA domain KM396_11490 PF01022 Bacterial regulatory protein, arsR family KM396_11500 PF07690 Major Facilitator Superfamily KM396_11505 PF00106 short chain dehydrogenase KM396_11510 PF00425 chorismate binding enzyme KM396_11515 PF13193 AMP-binding enzyme C-terminal domain KM396_11515 PF00501 AMP-binding enzyme KM396_11520 PF00550 Phosphopantetheine attachment site KM396_11520 PF00857 Isochorismatase family KM396_11525 PF13193 AMP-binding enzyme C-terminal domain KM396_11525 PF00550 Phosphopantetheine attachment site KM396_11525 PF00975 Thioesterase domain KM396_11525 PF00501 AMP-binding enzyme KM396_11525 PF00668 Condensation domain KM396_11530 PF03621 MbtH-like protein KM396_11535 PF07690 Major Facilitator Superfamily KM396_11550 PF00216 Bacterial DNA-binding protein KM396_11560 PF05163 DinB family KM396_11565 PF00082 Subtilase family KM396_11570 PF01235 Sodium:alanine symporter family KM396_11585 PF16291 Domain of unknown function (DUF4937 KM396_11590 PF01479 S4 domain KM396_11590 PF00849 RNA pseudouridylate synthase KM396_11595 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM396_11595 PF03129 Anticodon binding domain KM396_11595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM396_11595 PF02824 TGS domain KM396_11610 PF12146 Serine aminopeptidase, S33 KM396_11615 PF07690 Major Facilitator Superfamily KM396_11635 PF13649 Methyltransferase domain KM396_11680 PF00753 Metallo-beta-lactamase superfamily KM396_11680 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM396_11690 PF03176 MMPL family KM396_11700 PF00302 Chloramphenicol acetyltransferase KM396_11715 PF00583 Acetyltransferase (GNAT) family KM396_11745 PF01593 Flavin containing amine oxidoreductase KM396_11755 PF13302 Acetyltransferase (GNAT) domain KM396_11765 PF00313 'Cold-shock' DNA-binding domain KM396_11825 PF03466 LysR substrate binding domain KM396_11825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM396_11830 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM396_11830 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM396_11845 PF03466 LysR substrate binding domain KM396_11845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM396_11850 PF03473 MOSC domain KM396_11850 PF03475 3-alpha domain KM396_11865 PF00664 ABC transporter transmembrane region KM396_11865 PF00005 ABC transporter KM396_11870 PF00664 ABC transporter transmembrane region KM396_11870 PF00005 ABC transporter KM396_11885 PF01810 LysE type translocator KM396_11890 PF07883 Cupin domain KM396_11890 PF01381 Helix-turn-helix KM396_11915 PF00890 FAD binding domain KM396_11920 PF12680 SnoaL-like domain KM396_11920 PF08281 Sigma-70, region 4 KM396_11920 PF04542 Sigma-70 region 2 KM396_11945 PF02638 Glycosyl hydrolase-like 10 KM396_11955 PF02378 Phosphotransferase system, EIIC KM396_11965 PF03702 Anhydro-N-acetylmuramic acid kinase KM396_11970 PF01869 BadF/BadG/BcrA/BcrD ATPase family KM396_11975 PF02660 Glycerol-3-phosphate acyltransferase KM396_11980 PF00266 Aminotransferase class-V KM396_11985 PF00291 Pyridoxal-phosphate dependent enzyme KM396_12000 PF00753 Metallo-beta-lactamase superfamily KM396_12000 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM396_12015 PF00271 Helicase conserved C-terminal domain KM396_12015 PF00270 DEAD/DEAH box helicase KM396_12030 PF00440 Bacterial regulatory proteins, tetR family KM396_12030 PF17932 Tetracyclin repressor-like, C-terminal domain KM396_12045 PF12704 MacB-like periplasmic core domain KM396_12045 PF02687 FtsX-like permease family KM396_12045 PF00005 ABC transporter KM396_12050 PF03848 Tellurite resistance protein TehB KM396_12050 PF09313 Domain of unknown function (DUF1971) KM396_12060 PF08241 Methyltransferase domain KM396_12065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM396_12065 PF00205 Thiamine pyrophosphate enzyme, central domain KM396_12065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM396_12070 PF12802 MarR family KM396_12075 PF00300 Histidine phosphatase superfamily (branch 1) KM396_12080 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KM396_12110 PF07687 Peptidase dimerisation domain KM396_12110 PF01546 Peptidase family M20/M25/M40 KM396_12125 PF04542 Sigma-70 region 2 KM396_12125 PF08281 Sigma-70, region 4 KM396_12135 PF03717 Penicillin-binding Protein dimerisation domain KM396_12135 PF00905 Penicillin binding protein transpeptidase domain KM396_12150 PF01569 PAP2 superfamily KM396_12155 PF00356 Bacterial regulatory proteins, lacI family KM396_12160 PF07690 Major Facilitator Superfamily KM396_12165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM396_12165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM396_12170 PF00294 pfkB family carbohydrate kinase KM396_12175 PF00171 Aldehyde dehydrogenase family KM396_12180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM396_12180 PF00205 Thiamine pyrophosphate enzyme, central domain KM396_12180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM396_12190 PF01116 Fructose-bisphosphate aldolase class-II KM396_12195 PF04962 KduI/IolB family KM396_12220 PF18801 response regulator aspartate phosphatase H, N terminal KM396_12225 PF01381 Helix-turn-helix KM396_12240 PF02557 D-alanyl-D-alanine carboxypeptidase KM396_12250 PF00395 S-layer homology domain KM396_12250 PF01520 N-acetylmuramoyl-L-alanine amidase KM396_12260 PF00440 Bacterial regulatory proteins, tetR family KM396_12265 PF16326 ABC transporter C-terminal domain KM396_12265 PF00005 ABC transporter KM396_12275 PF00990 Diguanylate cyclase, GGDEF domain KM396_12275 PF03707 Bacterial signalling protein N terminal repeat KM396_12275 PF00563 EAL domain KM396_12280 PF13302 Acetyltransferase (GNAT) domain KM396_12295 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_12300 PF00581 Rhodanese-like domain KM396_12315 PF00005 ABC transporter KM396_12325 PF00440 Bacterial regulatory proteins, tetR family KM396_12325 PF08359 YsiA-like protein, C-terminal region KM396_12340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM396_12340 PF02770 Acyl-CoA dehydrogenase, middle domain KM396_12340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM396_12345 PF02785 Biotin carboxylase C-terminal domain KM396_12345 PF00289 Biotin carboxylase, N-terminal domain KM396_12345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM396_12350 PF00364 Biotin-requiring enzyme KM396_12355 PF00682 HMGL-like KM396_12360 PF00378 Enoyl-CoA hydratase/isomerase KM396_12365 PF01039 Carboxyl transferase domain KM396_12370 PF16177 Acetyl-coenzyme A synthetase N-terminus KM396_12370 PF00501 AMP-binding enzyme KM396_12370 PF13193 AMP-binding enzyme C-terminal domain KM396_12380 PF00583 Acetyltransferase (GNAT) family KM396_12385 PF00485 Phosphoribulokinase / Uridine kinase family KM396_12395 PF05163 DinB family KM396_12400 PF07943 Penicillin-binding protein 5, C-terminal domain KM396_12400 PF00768 D-alanyl-D-alanine carboxypeptidase KM396_12405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_12405 PF00512 His Kinase A (phospho-acceptor) domain KM396_12410 PF00486 Transcriptional regulatory protein, C terminal KM396_12410 PF00072 Response regulator receiver domain KM396_12415 PF01966 HD domain KM396_12420 PF13021 Domain of unknown function (DUF3885) KM396_12425 PF01048 Phosphorylase superfamily KM396_12465 PF17760 UvrA interaction domain KM396_12465 PF17755 UvrA DNA-binding domain KM396_12465 PF17760 UvrA interaction domain KM396_12465 PF17755 UvrA DNA-binding domain KM396_12480 PF00144 Beta-lactamase KM396_12485 PF09278 MerR, DNA binding KM396_12485 PF00376 MerR family regulatory protein KM396_12490 PF07690 Major Facilitator Superfamily KM396_12510 PF01636 Phosphotransferase enzyme family KM396_12515 PF12833 Helix-turn-helix domain KM396_12530 PF00392 Bacterial regulatory proteins, gntR family KM396_12530 PF00155 Aminotransferase class I and II KM396_12545 PF08240 Alcohol dehydrogenase GroES-like domain KM396_12545 PF00107 Zinc-binding dehydrogenase KM396_12575 PF07486 Cell Wall Hydrolase KM396_12585 PF00072 Response regulator receiver domain KM396_12585 PF00486 Transcriptional regulatory protein, C terminal KM396_12615 PF00005 ABC transporter KM396_12640 PF01842 ACT domain KM396_12640 PF00742 Homoserine dehydrogenase KM396_12640 PF03447 Homoserine dehydrogenase, NAD binding domain KM396_12645 PF00155 Aminotransferase class I and II KM396_12645 PF00392 Bacterial regulatory proteins, gntR family KM396_12650 PF07478 D-ala D-ala ligase C-terminus KM396_12650 PF01820 D-ala D-ala ligase N-terminus KM396_12655 PF03070 TENA/THI-4/PQQC family KM396_12720 PF00067 Cytochrome P450 KM396_12730 PF00132 Bacterial transferase hexapeptide (six repeats) KM396_12735 PF07561 Domain of Unknown Function (DUF1540) KM396_12745 PF00067 Cytochrome P450 KM396_12765 PF13188 PAS domain KM396_12765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_12765 PF00512 His Kinase A (phospho-acceptor) domain KM396_12765 PF00989 PAS fold KM396_12765 PF13426 PAS domain KM396_12770 PF03717 Penicillin-binding Protein dimerisation domain KM396_12770 PF00905 Penicillin binding protein transpeptidase domain KM396_12775 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM396_12780 PF01177 Asp/Glu/Hydantoin racemase KM396_12785 PF07155 ECF-type riboflavin transporter, S component KM396_12790 PF00005 ABC transporter KM396_12790 PF12558 ATP-binding cassette cobalt transporter KM396_12805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_12805 PF00512 His Kinase A (phospho-acceptor) domain KM396_12815 PF04229 GrpB protein KM396_12820 PF00107 Zinc-binding dehydrogenase KM396_12820 PF08240 Alcohol dehydrogenase GroES-like domain KM396_12825 PF03717 Penicillin-binding Protein dimerisation domain KM396_12825 PF00905 Penicillin binding protein transpeptidase domain KM396_12825 PF03793 PASTA domain KM396_12870 PF01965 DJ-1/PfpI family KM396_12885 PF00144 Beta-lactamase KM396_12900 PF07690 Major Facilitator Superfamily KM396_12915 PF03009 Glycerophosphoryl diester phosphodiesterase family KM396_12935 PF00892 EamA-like transporter family KM396_12940 PF01270 Glycosyl hydrolases family 8 KM396_12950 PF00293 NUDIX domain KM396_12960 PF00144 Beta-lactamase KM396_12970 PF07690 Major Facilitator Superfamily KM396_12985 PF09297 NADH pyrophosphatase zinc ribbon domain KM396_12985 PF00293 NUDIX domain KM396_12990 PF00712 DNA polymerase III beta subunit, N-terminal domain KM396_12990 PF02767 DNA polymerase III beta subunit, central domain KM396_12990 PF02768 DNA polymerase III beta subunit, C-terminal domain KM396_12995 PF00293 NUDIX domain KM396_13010 PF12706 Beta-lactamase superfamily domain KM396_13030 PF09234 Domain of unknown function (DUF1963) KM396_13055 PF08000 Bacterial PH domain KM396_13065 PF12867 DinB superfamily KM396_13080 PF02673 Bacitracin resistance protein BacA KM396_13090 PF01541 GIY-YIG catalytic domain KM396_13130 PF01266 FAD dependent oxidoreductase KM396_13155 PF13419 Haloacid dehalogenase-like hydrolase KM396_13175 PF00282 Pyridoxal-dependent decarboxylase conserved domain KM396_13180 PF00501 AMP-binding enzyme KM396_13180 PF13193 AMP-binding enzyme C-terminal domain KM396_13180 PF00550 Phosphopantetheine attachment site KM396_13180 PF00668 Condensation domain KM396_13190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM396_13190 PF00128 Alpha amylase, catalytic domain KM396_13190 PF03714 Bacterial pullanase-associated domain KM396_13195 PF07504 Fungalysin/Thermolysin Propeptide Motif KM396_13195 PF03413 Peptidase propeptide and YPEB domain KM396_13195 PF01447 Thermolysin metallopeptidase, catalytic domain KM396_13195 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM396_13215 PF00344 SecY translocase KM396_13220 PF11638 DnaA N-terminal domain KM396_13220 PF00308 Bacterial dnaA protein KM396_13220 PF08299 Bacterial dnaA protein helix-turn-helix KM396_13225 PF00892 EamA-like transporter family KM396_13230 PF00155 Aminotransferase class I and II KM396_13230 PF00392 Bacterial regulatory proteins, gntR family KM396_13235 PF00561 alpha/beta hydrolase fold KM396_13260 PF06081 Aromatic acid exporter family member 1 KM396_13275 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM396_13280 PF14620 YpeB sporulation KM396_13280 PF03413 Peptidase propeptide and YPEB domain KM396_13285 PF01471 Putative peptidoglycan binding domain KM396_13285 PF07486 Cell Wall Hydrolase KM396_13300 PF03301 Tryptophan 2,3-dioxygenase KM396_13305 PF04199 Putative cyclase KM396_13310 PF00266 Aminotransferase class-V KM396_13315 PF08359 YsiA-like protein, C-terminal region KM396_13315 PF00440 Bacterial regulatory proteins, tetR family KM396_13320 PF13344 Haloacid dehalogenase-like hydrolase KM396_13320 PF00293 NUDIX domain KM396_13345 PF02954 Bacterial regulatory protein, Fis family KM396_13345 PF00158 Sigma-54 interaction domain KM396_13345 PF01590 GAF domain KM396_13360 PF13302 Acetyltransferase (GNAT) domain KM396_13365 PF00455 DeoR C terminal sensor domain KM396_13365 PF08220 DeoR-like helix-turn-helix domain KM396_13380 PF00403 Heavy-metal-associated domain KM396_13380 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_13380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM396_13385 PF02082 Transcriptional regulator KM396_13400 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_13400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM396_13405 PF02817 e3 binding domain KM396_13405 PF00364 Biotin-requiring enzyme KM396_13405 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM396_13410 PF02779 Transketolase, pyrimidine binding domain KM396_13410 PF02780 Transketolase, C-terminal domain KM396_13415 PF00676 Dehydrogenase E1 component KM396_13425 PF00106 short chain dehydrogenase KM396_13430 PF04229 GrpB protein KM396_13430 PF13673 Acetyltransferase (GNAT) domain KM396_13460 PF00528 Binding-protein-dependent transport system inner membrane component KM396_13465 PF00571 CBS domain KM396_13465 PF00005 ABC transporter KM396_13470 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KM396_13475 PF00574 Clp protease KM396_13490 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KM396_13495 PF13673 Acetyltransferase (GNAT) domain KM396_13500 PF18416 N-acetylglucosamine binding protein domain 2 KM396_13500 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM396_13515 PF10990 Protein of unknown function (DUF2809) KM396_13540 PF13567 Domain of unknown function (DUF4131) KM396_13540 PF03772 Competence protein KM396_13540 PF00753 Metallo-beta-lactamase superfamily KM396_13590 PF13538 UvrD-like helicase C-terminal domain KM396_13605 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KM396_13610 PF00270 DEAD/DEAH box helicase KM396_13610 PF00271 Helicase conserved C-terminal domain KM396_13610 PF16124 RecQ zinc-binding KM396_13610 PF09382 RQC domain KM396_13610 PF00570 HRDC domain KM396_13650 PF01368 DHH family KM396_13650 PF02833 DHHA2 domain KM396_13655 PF18416 N-acetylglucosamine binding protein domain 2 KM396_13655 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM396_13670 PF02627 Carboxymuconolactone decarboxylase family KM396_13675 PF01235 Sodium:alanine symporter family KM396_13680 PF00171 Aldehyde dehydrogenase family KM396_13685 PF00701 Dihydrodipicolinate synthetase family KM396_13690 PF05544 Proline racemase KM396_13695 PF05544 Proline racemase KM396_13700 PF01266 FAD dependent oxidoreductase KM396_13705 PF02954 Bacterial regulatory protein, Fis family KM396_13705 PF13188 PAS domain KM396_13705 PF00158 Sigma-54 interaction domain KM396_13720 PF04324 BFD-like [2Fe-2S] binding domain KM396_13720 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_13735 PF08876 Domain of unknown function (DUF1836) KM396_13740 PF09335 SNARE associated Golgi protein KM396_13755 PF04914 DltD protein KM396_13760 PF00958 GMP synthase C terminal domain KM396_13760 PF00117 Glutamine amidotransferase class-I KM396_13760 PF03352 Methyladenine glycosylase KM396_13760 PF13302 Acetyltransferase (GNAT) domain KM396_13760 PF13673 Acetyltransferase (GNAT) domain KM396_13765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_13770 PF00877 NlpC/P60 family KM396_13770 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain KM396_13775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM396_13775 PF13378 Enolase C-terminal domain-like KM396_13795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM396_13820 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KM396_13820 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KM396_13825 PF00512 His Kinase A (phospho-acceptor) domain KM396_13825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_13825 PF16736 Single Cache-like KM396_13825 PF00989 PAS fold KM396_13850 PF01048 Phosphorylase superfamily KM396_13860 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM396_13865 PF08439 Oligopeptidase F KM396_13865 PF01432 Peptidase family M3 KM396_13880 PF02645 Uncharacterised protein, DegV family COG1307 KM396_13900 PF07690 Major Facilitator Superfamily KM396_13910 PF04519 Polymer-forming cytoskeletal KM396_13915 PF13171 Protein of unknown function (DUF4004) KM396_13920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_13920 PF12793 Sugar transport-related sRNA regulator N-term KM396_13925 PF07690 Major Facilitator Superfamily KM396_13945 PF04226 Transglycosylase associated protein KM396_13950 PF01156 Inosine-uridine preferring nucleoside hydrolase KM396_13960 PF08241 Methyltransferase domain KM396_13995 PF00155 Aminotransferase class I and II KM396_14000 PF07977 FabA-like domain KM396_14005 PF03630 Fumble KM396_14070 PF01594 AI-2E family transporter KM396_14080 PF00296 Luciferase-like monooxygenase KM396_14085 PF00528 Binding-protein-dependent transport system inner membrane component KM396_14090 PF09084 NMT1/THI5 like KM396_14095 PF00005 ABC transporter KM396_14115 PF00293 NUDIX domain KM396_14115 PF09297 NADH pyrophosphatase zinc ribbon domain KM396_14135 PF02522 Aminoglycoside 3-N-acetyltransferase KM396_14160 PF13536 Putative multidrug resistance efflux transporter KM396_14165 PF12867 DinB superfamily KM396_14185 PF08713 DNA alkylation repair enzyme KM396_14195 PF01522 Polysaccharide deacetylase KM396_14205 PF03741 Integral membrane protein TerC family KM396_14210 PF00884 Sulfatase KM396_14215 PF00005 ABC transporter KM396_14215 PF12848 ABC transporter KM396_14225 PF03176 MMPL family KM396_14230 PF03176 MMPL family KM396_14235 PF03176 MMPL family KM396_14240 PF16295 Tetracyclin repressor-like, C-terminal domain KM396_14240 PF00440 Bacterial regulatory proteins, tetR family KM396_14250 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM396_14255 PF02153 Prephenate dehydrogenase KM396_14255 PF01842 ACT domain KM396_14260 PF00155 Aminotransferase class I and II KM396_14265 PF01264 Chorismate synthase KM396_14270 PF01817 Chorismate mutase type II KM396_14270 PF00793 DAHP synthetase I family KM396_14290 PF01636 Phosphotransferase enzyme family KM396_14305 PF06725 3D domain KM396_14305 PF01476 LysM domain KM396_14315 PF08281 Sigma-70, region 4 KM396_14315 PF04542 Sigma-70 region 2 KM396_14335 PF06039 Malate:quinone oxidoreductase (Mqo) KM396_14340 PF13407 Periplasmic binding protein domain KM396_14345 PF02653 Branched-chain amino acid transport system / permease component KM396_14350 PF02653 Branched-chain amino acid transport system / permease component KM396_14355 PF00005 ABC transporter KM396_14360 PF00325 Bacterial regulatory proteins, crp family KM396_14360 PF04198 Putative sugar-binding domain KM396_14375 PF01791 DeoC/LacD family aldolase KM396_14395 PF03992 Antibiotic biosynthesis monooxygenase KM396_14415 PF07662 Na+ dependent nucleoside transporter C-terminus KM396_14415 PF01773 Na+ dependent nucleoside transporter N-terminus KM396_14420 PF00171 Aldehyde dehydrogenase family KM396_14425 PF00696 Amino acid kinase family KM396_14425 PF01472 PUA domain KM396_14430 PF03807 NADP oxidoreductase coenzyme F420-dependent KM396_14430 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM396_14435 PF01546 Peptidase family M20/M25/M40 KM396_14440 PF01614 Bacterial transcriptional regulator KM396_14440 PF09339 IclR helix-turn-helix domain KM396_14445 PF00324 Amino acid permease KM396_14450 PF01139 tRNA-splicing ligase RtcB KM396_14455 PF00487 Fatty acid desaturase KM396_14460 PF00245 Alkaline phosphatase KM396_14465 PF11188 Protein of unknown function (DUF2975) KM396_14470 PF13443 Cro/C1-type HTH DNA-binding domain KM396_14485 PF10086 YhfC intramembrane metalloprotease KM396_14495 PF00072 Response regulator receiver domain KM396_14495 PF04397 LytTr DNA-binding domain KM396_14505 PF13302 Acetyltransferase (GNAT) domain KM396_14510 PF12681 Glyoxalase-like domain KM396_14530 PF07726 ATPase family associated with various cellular activities (AAA) KM396_14530 PF17863 AAA lid domain KM396_14545 PF07690 Major Facilitator Superfamily KM396_14555 PF00535 Glycosyl transferase family 2 KM396_14570 PF00535 Glycosyl transferase family 2 KM396_14580 PF00535 Glycosyl transferase family 2 KM396_14590 PF00202 Aminotransferase class-III KM396_14595 PF00199 Catalase KM396_14595 PF06628 Catalase-related immune-responsive KM396_14605 PF13382 Adenine deaminase C-terminal domain KM396_14605 PF01979 Amidohydrolase family KM396_14610 PF00144 Beta-lactamase KM396_14630 PF17863 AAA lid domain KM396_14630 PF07726 ATPase family associated with various cellular activities (AAA) KM396_14640 PF00881 Nitroreductase family KM396_14645 PF01047 MarR family KM396_14650 PF03764 Elongation factor G, domain IV KM396_14650 PF00009 Elongation factor Tu GTP binding domain KM396_14650 PF00679 Elongation factor G C-terminus KM396_14650 PF14492 Elongation Factor G, domain II KM396_14660 PF00293 NUDIX domain KM396_14675 PF00005 ABC transporter KM396_14680 PF00392 Bacterial regulatory proteins, gntR family KM396_14690 PF02687 FtsX-like permease family KM396_14690 PF12704 MacB-like periplasmic core domain KM396_14690 PF00005 ABC transporter KM396_14715 PF12833 Helix-turn-helix domain KM396_14720 PF00583 Acetyltransferase (GNAT) family KM396_14735 PF00892 EamA-like transporter family KM396_14740 PF00155 Aminotransferase class I and II KM396_14740 PF00392 Bacterial regulatory proteins, gntR family KM396_14745 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KM396_14750 PF13031 Protein of unknown function (DUF3892) KM396_14760 PF00672 HAMP domain KM396_14760 PF00512 His Kinase A (phospho-acceptor) domain KM396_14765 PF00072 Response regulator receiver domain KM396_14765 PF00486 Transcriptional regulatory protein, C terminal KM396_14770 PF00561 alpha/beta hydrolase fold KM396_14800 PF01925 Sulfite exporter TauE/SafE KM396_14805 PF13302 Acetyltransferase (GNAT) domain KM396_14810 PF00324 Amino acid permease KM396_14820 PF08713 DNA alkylation repair enzyme KM396_14825 PF10898 Protein of unknown function (DUF2716) KM396_14845 PF00293 NUDIX domain KM396_14855 PF10502 Signal peptidase, peptidase S26 KM396_14860 PF03717 Penicillin-binding Protein dimerisation domain KM396_14860 PF00905 Penicillin binding protein transpeptidase domain KM396_14870 PF02146 Sir2 family KM396_14875 PF01470 Pyroglutamyl peptidase KM396_14895 PF03746 LamB/YcsF family KM396_14900 PF02626 Carboxyltransferase domain, subdomain A and B KM396_14905 PF02682 Carboxyltransferase domain, subdomain C and D KM396_14910 PF09339 IclR helix-turn-helix domain KM396_14910 PF01614 Bacterial transcriptional regulator KM396_14915 PF10502 Signal peptidase, peptidase S26 KM396_14920 PF03932 CutC family KM396_14925 PF07454 Stage II sporulation protein P (SpoIIP) KM396_14940 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KM396_14940 PF02770 Acyl-CoA dehydrogenase, middle domain KM396_14940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM396_14955 PF07670 Nucleoside recognition KM396_14970 PF02915 Rubrerythrin KM396_14980 PF00440 Bacterial regulatory proteins, tetR family KM396_14985 PF00391 PEP-utilising enzyme, mobile domain KM396_14985 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KM396_14990 PF00753 Metallo-beta-lactamase superfamily KM396_15005 PF07875 Coat F domain KM396_15010 PF08892 YqcI/YcgG family KM396_15015 PF01810 LysE type translocator KM396_15030 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM396_15035 PF10710 Protein of unknown function (DUF2512) KM396_15040 PF11553 Protein of unknown function (DUF3231) KM396_15045 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM396_15050 PF08240 Alcohol dehydrogenase GroES-like domain KM396_15050 PF13823 Alcohol dehydrogenase GroES-associated KM396_15050 PF00107 Zinc-binding dehydrogenase KM396_15065 PF00206 Lyase KM396_15065 PF10415 Fumarase C C-terminus KM396_15070 PF17763 Glutaminase/Asparaginase C-terminal domain KM396_15070 PF00710 Asparaginase, N-terminal KM396_15075 PF01381 Helix-turn-helix KM396_15085 PF01541 GIY-YIG catalytic domain KM396_15085 PF12826 Helix-hairpin-helix motif KM396_15085 PF02151 UvrB/uvrC motif KM396_15085 PF08459 UvrC Helix-hairpin-helix N-terminal KM396_15090 PF13520 Amino acid permease KM396_15095 PF05525 Branched-chain amino acid transport protein KM396_15100 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM396_15100 PF03807 NADP oxidoreductase coenzyme F420-dependent KM396_15105 PF13564 DoxX-like family KM396_15110 PF00390 Malic enzyme, N-terminal domain KM396_15110 PF03949 Malic enzyme, NAD binding domain KM396_15125 PF03845 Spore germination protein KM396_15135 PF08664 YcbB domain KM396_15135 PF00072 Response regulator receiver domain KM396_15145 PF04960 Glutaminase KM396_15150 PF01235 Sodium:alanine symporter family KM396_15180 PF02872 5'-nucleotidase, C-terminal domain KM396_15180 PF00149 Calcineurin-like phosphoesterase KM396_15180 PF17936 Bacterial Ig domain KM396_15185 PF06628 Catalase-related immune-responsive KM396_15185 PF00199 Catalase KM396_15190 PF00561 alpha/beta hydrolase fold KM396_15195 PF00857 Isochorismatase family KM396_15215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM396_15215 PF03466 LysR substrate binding domain KM396_15220 PF01047 MarR family KM396_15240 PF11181 Heat induced stress protein YflT KM396_15255 PF03073 TspO/MBR family KM396_15260 PF00875 DNA photolyase KM396_15260 PF03441 FAD binding domain of DNA photolyase KM396_15270 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KM396_15275 PF00361 Proton-conducting membrane transporter KM396_15275 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM396_15280 PF10057 Uncharacterized conserved protein (DUF2294) KM396_15295 PF01040 UbiA prenyltransferase family KM396_15300 PF00561 alpha/beta hydrolase fold KM396_15305 PF01297 Zinc-uptake complex component A periplasmic KM396_15310 PF00950 ABC 3 transport family KM396_15315 PF00005 ABC transporter KM396_15340 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM396_15345 PF01758 Sodium Bile acid symporter family KM396_15350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM396_15355 PF01022 Bacterial regulatory protein, arsR family KM396_15370 PF00012 Hsp70 protein KM396_15385 PF01037 Lrp/AsnC ligand binding domain KM396_15400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM396_15425 PF02805 Metal binding domain of Ada KM396_15425 PF12833 Helix-turn-helix domain KM396_15435 PF00144 Beta-lactamase KM396_15460 PF12802 MarR family KM396_15465 PF00667 FAD binding domain KM396_15465 PF00258 Flavodoxin KM396_15465 PF00175 Oxidoreductase NAD-binding domain KM396_15465 PF00067 Cytochrome P450 KM396_15470 PF07690 Major Facilitator Superfamily KM396_15495 PF00072 Response regulator receiver domain KM396_15495 PF00486 Transcriptional regulatory protein, C terminal KM396_15500 PF00512 His Kinase A (phospho-acceptor) domain KM396_15500 PF00672 HAMP domain KM396_15500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_15525 PF00291 Pyridoxal-phosphate dependent enzyme KM396_15545 PF01381 Helix-turn-helix KM396_15560 PF00753 Metallo-beta-lactamase superfamily KM396_15565 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM396_15575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM396_15575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM396_15580 PF04072 Leucine carboxyl methyltransferase KM396_15595 PF00005 ABC transporter KM396_15600 PF02687 FtsX-like permease family KM396_15615 PF00672 HAMP domain KM396_15615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_15615 PF00512 His Kinase A (phospho-acceptor) domain KM396_15620 PF00072 Response regulator receiver domain KM396_15620 PF00486 Transcriptional regulatory protein, C terminal KM396_15630 PF01047 MarR family KM396_15640 PF04299 Putative FMN-binding domain KM396_15645 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM396_15645 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM396_15650 PF07690 Major Facilitator Superfamily KM396_15655 PF02589 LUD domain KM396_15660 PF13183 4Fe-4S dicluster domain KM396_15660 PF02589 LUD domain KM396_15660 PF11870 Domain of unknown function (DUF3390) KM396_15665 PF02754 Cysteine-rich domain KM396_15670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM396_15670 PF03466 LysR substrate binding domain KM396_15680 PF02016 LD-carboxypeptidase N-terminal domain KM396_15680 PF17676 LD-carboxypeptidase C-terminal domain KM396_15700 PF07690 Major Facilitator Superfamily KM396_15705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM396_15705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM396_15710 PF05116 Sucrose-6F-phosphate phosphohydrolase KM396_15720 PF00356 Bacterial regulatory proteins, lacI family KM396_15725 PF18801 response regulator aspartate phosphatase H, N terminal KM396_15745 PF00817 impB/mucB/samB family KM396_15745 PF11798 IMS family HHH motif KM396_15745 PF11799 impB/mucB/samB family C-terminal domain KM396_15760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM396_15760 PF00672 HAMP domain KM396_15760 PF02743 Cache domain KM396_15775 PF01554 MatE KM396_15785 PF18496 Collagenase G catalytic helper subdomain KM396_15785 PF08453 Peptidase family M9 N-terminal KM396_15785 PF01752 Collagenase KM396_15795 PF07690 Major Facilitator Superfamily KM396_15800 PF00440 Bacterial regulatory proteins, tetR family KM396_15800 PF16859 Tetracyclin repressor-like, C-terminal domain KM396_15810 PF01022 Bacterial regulatory protein, arsR family KM396_15820 PF03313 Serine dehydratase alpha chain KM396_15825 PF03315 Serine dehydratase beta chain KM396_15825 PF01842 ACT domain KM396_15835 PF00202 Aminotransferase class-III KM396_15840 PF01300 Telomere recombination KM396_15840 PF17788 HypF Kae1-like domain KM396_15840 PF00708 Acylphosphatase KM396_15840 PF07503 HypF finger KM396_15845 PF00586 AIR synthase related protein, N-terminal domain KM396_15845 PF02769 AIR synthase related protein, C-terminal domain KM396_15850 PF00857 Isochorismatase family KM396_15855 PF01037 Lrp/AsnC ligand binding domain KM396_15860 PF13520 Amino acid permease KM396_15875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM396_15875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM396_15875 PF01842 ACT domain KM396_15880 PF00266 Aminotransferase class-V KM396_15895 PF04542 Sigma-70 region 2 KM396_15895 PF08281 Sigma-70, region 4 KM396_15910 PF07883 Cupin domain KM396_15915 PF12833 Helix-turn-helix domain KM396_15915 PF01497 Periplasmic binding protein KM396_15920 PF01804 Penicillin amidase KM396_15960 PF14044 NETI protein KM396_15965 PF07690 Major Facilitator Superfamily KM396_15970 PF12697 Alpha/beta hydrolase family KM396_15975 PF01047 MarR family KM396_15980 PF07690 Major Facilitator Superfamily KM396_15990 PF12679 ABC-2 family transporter protein KM396_15995 PF00005 ABC transporter KM396_15995 PF13732 Domain of unknown function (DUF4162) KM396_16000 PF13396 Phospholipase_D-nuclease N-terminal KM396_16010 PF17314 Family of unknown function (DUF5360) KM396_16015 PF00893 Small Multidrug Resistance protein KM396_16020 PF00440 Bacterial regulatory proteins, tetR family KM396_16025 PF17440 Thiol-activated cytolysin beta sandwich domain KM396_16025 PF01289 Thiol-activated cytolysin KM396_16030 PF02667 Short chain fatty acid transporter KM396_16040 PF02525 Flavodoxin-like fold KM396_16060 PF14256 YwiC-like protein KM396_16070 PF00005 ABC transporter KM396_16075 PF02361 Cobalt transport protein KM396_16090 PF03737 Aldolase/RraA KM396_16095 PF03606 C4-dicarboxylate anaerobic carrier KM396_16100 PF04231 Endonuclease I KM396_16115 PF01381 Helix-turn-helix KM396_16120 PF02660 Glycerol-3-phosphate acyltransferase KM396_16125 PF04073 Aminoacyl-tRNA editing domain KM396_16130 PF03129 Anticodon binding domain KM396_16130 PF13393 Histidyl-tRNA synthetase KM396_16145 PF01638 HxlR-like helix-turn-helix KM396_16150 PF00881 Nitroreductase family KM396_16160 PF02887 Pyruvate kinase, alpha/beta domain KM396_16160 PF00391 PEP-utilising enzyme, mobile domain KM396_16160 PF00224 Pyruvate kinase, barrel domain KM396_16180 PF00005 ABC transporter KM396_16205 PF13419 Haloacid dehalogenase-like hydrolase KM396_16215 PF13350 Tyrosine phosphatase family KM396_16240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM396_16245 PF00480 ROK family KM396_16250 PF07690 Major Facilitator Superfamily KM396_16255 PF12464 Maltose acetyltransferase KM396_16255 PF14602 Hexapeptide repeat of succinyl-transferase KM396_16265 PF02687 FtsX-like permease family KM396_16265 PF00005 ABC transporter KM396_16265 PF12704 MacB-like periplasmic core domain KM396_16280 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM396_16280 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM396_16280 PF13288 DXP reductoisomerase C-terminal domain KM396_16285 PF01594 AI-2E family transporter KM396_16305 PF08241 Methyltransferase domain KM396_16315 PF07690 Major Facilitator Superfamily KM396_16335 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM396_16345 PF03471 Transporter associated domain KM396_16345 PF01595 Cyclin M transmembrane N-terminal domain KM396_16345 PF00571 CBS domain KM396_16350 PF13411 MerR HTH family regulatory protein KM396_16355 PF00892 EamA-like transporter family KM396_16360 PF00805 Pentapeptide repeats (8 copies) KM396_16365 PF06906 Protein of unknown function (DUF1272) KM396_16370 PF10282 Lactonase, 7-bladed beta-propeller KM396_16375 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM396_16375 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM396_16380 PF02447 GntP family permease KM396_16385 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM396_16390 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM396_16390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM396_16395 PF02779 Transketolase, pyrimidine binding domain KM396_16395 PF00456 Transketolase, thiamine diphosphate binding domain KM396_16395 PF02780 Transketolase, C-terminal domain KM396_16400 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM396_16400 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM396_16405 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM396_16405 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM396_16410 PF08240 Alcohol dehydrogenase GroES-like domain KM396_16410 PF00107 Zinc-binding dehydrogenase KM396_16415 PF00296 Luciferase-like monooxygenase KM396_16425 PF08240 Alcohol dehydrogenase GroES-like domain KM396_16425 PF00109 Beta-ketoacyl synthase, N-terminal domain KM396_16425 PF02801 Beta-ketoacyl synthase, C-terminal domain KM396_16425 PF08659 KR domain KM396_16425 PF14765 Polyketide synthase dehydratase KM396_16425 PF00550 Phosphopantetheine attachment site KM396_16425 PF16197 Ketoacyl-synthetase C-terminal extension KM396_16425 PF00698 Acyl transferase domain KM396_16430 PF00106 short chain dehydrogenase KM396_16435 PF07504 Fungalysin/Thermolysin Propeptide Motif KM396_16435 PF03413 Peptidase propeptide and YPEB domain KM396_16435 PF01447 Thermolysin metallopeptidase, catalytic domain KM396_16435 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM396_16455 PF00248 Aldo/keto reductase family KM396_16460 PF07690 Major Facilitator Superfamily KM396_16470 PF03928 Haem-degrading KM396_16475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM396_16505 PF03960 ArsC family KM396_16510 PF01638 HxlR-like helix-turn-helix KM396_16515 PF00392 Bacterial regulatory proteins, gntR family KM396_16515 PF07702 UTRA domain KM396_16530 PF01638 HxlR-like helix-turn-helix KM396_16535 PF01638 HxlR-like helix-turn-helix KM396_16540 PF00248 Aldo/keto reductase family KM396_16570 PF02567 Phenazine biosynthesis-like protein KM396_16590 PF00501 AMP-binding enzyme KM396_16590 PF13193 AMP-binding enzyme C-terminal domain KM396_16600 PF01638 HxlR-like helix-turn-helix KM396_16620 PF01022 Bacterial regulatory protein, arsR family KM396_16630 PF12791 Anti-sigma factor N-terminus KM396_16635 PF04542 Sigma-70 region 2 KM396_16650 PF00440 Bacterial regulatory proteins, tetR family KM396_16670 PF05656 Protein of unknown function (DUF805) KM396_16675 PF01061 ABC-2 type transporter KM396_16680 PF00005 ABC transporter KM396_16680 PF13732 Domain of unknown function (DUF4162) KM396_16695 PF03063 Prismane/CO dehydrogenase family KM396_16705 PF00753 Metallo-beta-lactamase superfamily KM396_16710 PF01183 Glycosyl hydrolases family 25 KM396_16710 PF01471 Putative peptidoglycan binding domain KM396_16735 PF00144 Beta-lactamase KM396_16775 PF00753 Metallo-beta-lactamase superfamily KM396_16780 PF08240 Alcohol dehydrogenase GroES-like domain KM396_16780 PF00107 Zinc-binding dehydrogenase KM396_16785 PF00324 Amino acid permease KM396_16790 PF07690 Major Facilitator Superfamily KM396_16815 PF02585 GlcNAc-PI de-N-acetylase KM396_16820 PF08830 Protein of unknown function (DUF1806) KM396_16825 PF03600 Citrate transporter KM396_16845 PF01497 Periplasmic binding protein KM396_16850 PF01032 FecCD transport family KM396_16855 PF01032 FecCD transport family KM396_16860 PF05675 Protein of unknown function (DUF817) KM396_16865 PF02567 Phenazine biosynthesis-like protein KM396_16870 PF13170 Protein of unknown function (DUF4003) KM396_16885 PF10901 Protein of unknown function (DUF2690) KM396_16895 PF03466 LysR substrate binding domain KM396_16895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM396_16900 PF00107 Zinc-binding dehydrogenase KM396_16900 PF08240 Alcohol dehydrogenase GroES-like domain KM396_16915 PF01713 Smr domain KM396_16915 PF00488 MutS domain V KM396_16925 PF00128 Alpha amylase, catalytic domain KM396_16925 PF09154 Domain of unknown function (DUF1939) KM396_16935 PF01432 Peptidase family M3 KM396_16935 PF08439 Oligopeptidase F KM396_16940 PF00144 Beta-lactamase KM396_16950 PF07690 Major Facilitator Superfamily KM396_16955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM396_16955 PF03466 LysR substrate binding domain KM396_16970 PF03009 Glycerophosphoryl diester phosphodiesterase family KM396_16990 PF01494 FAD binding domain KM396_16995 PF01022 Bacterial regulatory protein, arsR family KM396_17000 PF00107 Zinc-binding dehydrogenase KM396_17000 PF08240 Alcohol dehydrogenase GroES-like domain KM396_17005 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KM396_17020 PF04299 Putative FMN-binding domain KM396_17025 PF04229 GrpB protein KM396_17035 PF01758 Sodium Bile acid symporter family KM396_17040 PF02913 FAD linked oxidases, C-terminal domain KM396_17040 PF01565 FAD binding domain KM396_17060 PF00132 Bacterial transferase hexapeptide (six repeats) KM396_17065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM396_17070 PF00535 Glycosyl transferase family 2 KM396_17075 PF00378 Enoyl-CoA hydratase/isomerase KM396_17080 PF01752 Collagenase KM396_17080 PF18496 Collagenase G catalytic helper subdomain KM396_17080 PF08453 Peptidase family M9 N-terminal KM396_17085 PF02308 MgtC family KM396_17100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM396_17105 PF04294 VanW like protein KM396_17115 PF13037 Domain of unknown function (DUF3898) KM396_17115 PF13039 Protein of unknown function (DUF3900) KM396_17135 PF00313 'Cold-shock' DNA-binding domain KM396_17145 PF00258 Flavodoxin KM396_17155 PF00293 NUDIX domain KM396_17165 PF00132 Bacterial transferase hexapeptide (six repeats) KM396_17175 PF00106 short chain dehydrogenase KM396_17185 PF14698 Argininosuccinate lyase C-terminal KM396_17185 PF00206 Lyase KM396_17195 PF01156 Inosine-uridine preferring nucleoside hydrolase KM396_17200 PF00474 Sodium:solute symporter family KM396_17210 PF00171 Aldehyde dehydrogenase family KM396_17220 PF14151 YfhD-like protein KM396_17225 PF13243 Squalene-hopene cyclase C-terminal domain KM396_17225 PF13249 Squalene-hopene cyclase N-terminal domain KM396_17230 PF02681 Divergent PAP2 family KM396_17235 PF00892 EamA-like transporter family KM396_17240 PF06961 Protein of unknown function (DUF1294) KM396_17255 PF10609 NUBPL iron-transfer P-loop NTPase KM396_17265 PF02391 MoaE protein KM396_17270 PF00994 Probable molybdopterin binding domain KM396_17270 PF03454 MoeA C-terminal region (domain IV) KM396_17270 PF03453 MoeA N-terminal region (domain I and II) KM396_17275 PF00899 ThiF family KM396_17280 PF01226 Formate/nitrite transporter KM396_17285 PF06463 Molybdenum Cofactor Synthesis C KM396_17285 PF04055 Radical SAM superfamily KM396_17290 PF02634 FdhD/NarQ family KM396_17295 PF10057 Uncharacterized conserved protein (DUF2294) KM396_17300 PF07849 Protein of unknown function (DUF1641) KM396_17305 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM396_17305 PF01568 Molydopterin dinucleotide binding domain KM396_17305 PF00384 Molybdopterin oxidoreductase KM396_17305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM396_17305 PF00037 4Fe-4S binding domain KM396_17310 PF03323 Bacillus/Clostridium GerA spore germination protein KM396_17350 PF08241 Methyltransferase domain KM396_17355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_17360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_17365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_17370 PF00375 Sodium:dicarboxylate symporter family KM396_17375 PF03816 Cell envelope-related transcriptional attenuator domain KM396_17385 PF04542 Sigma-70 region 2 KM396_17385 PF08281 Sigma-70, region 4 KM396_17405 PF00005 ABC transporter KM396_17405 PF13732 Domain of unknown function (DUF4162) KM396_17415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM396_17415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM396_17420 PF03989 DNA gyrase C-terminal domain, beta-propeller KM396_17420 PF00521 DNA gyrase/topoisomerase IV, subunit A KM396_17425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_17425 PF00986 DNA gyrase B subunit, carboxyl terminus KM396_17425 PF00204 DNA gyrase B KM396_17425 PF01751 Toprim domain KM396_17430 PF13380 CoA binding domain KM396_17435 PF13180 PDZ domain KM396_17440 PF00486 Transcriptional regulatory protein, C terminal KM396_17440 PF00072 Response regulator receiver domain KM396_17445 PF04055 Radical SAM superfamily KM396_17450 PF03477 ATP cone domain KM396_17450 PF13597 Anaerobic ribonucleoside-triphosphate reductase KM396_17455 PF02660 Glycerol-3-phosphate acyltransferase KM396_17460 PF01521 Iron-sulphur cluster biosynthesis KM396_17465 PF03061 Thioesterase superfamily KM396_17470 PF00704 Glycosyl hydrolases family 18 KM396_17470 PF01476 LysM domain KM396_17480 PF08177 Small acid-soluble spore protein N family KM396_17485 PF13040 Fur-regulated basic protein B KM396_17490 PF02811 PHP domain KM396_17490 PF11490 DNA polymerase III polC-type N-terminus II KM396_17490 PF01336 OB-fold nucleic acid binding domain KM396_17490 PF14579 Helix-hairpin-helix motif KM396_17490 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM396_17490 PF00929 Exonuclease KM396_17490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM396_17495 PF00578 AhpC/TSA family KM396_17505 PF00664 ABC transporter transmembrane region KM396_17505 PF03412 Peptidase C39 family KM396_17505 PF00005 ABC transporter KM396_17510 PF00330 Aconitase family (aconitate hydratase) KM396_17510 PF00694 Aconitase C-terminal domain KM396_17520 PF01522 Polysaccharide deacetylase KM396_17550 PF02272 DHHA1 domain KM396_17550 PF01411 tRNA synthetases class II (A) KM396_17550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM396_17555 PF13344 Haloacid dehalogenase-like hydrolase KM396_17555 PF00293 NUDIX domain KM396_17565 PF00108 Thiolase, N-terminal domain KM396_17565 PF02803 Thiolase, C-terminal domain KM396_17570 PF00501 AMP-binding enzyme KM396_17570 PF13193 AMP-binding enzyme C-terminal domain KM396_17575 PF02632 BioY family KM396_17580 PF00501 AMP-binding enzyme KM396_17580 PF13193 AMP-binding enzyme C-terminal domain KM396_17600 PF05532 CsbD-like KM396_17630 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM396_17630 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM396_17640 PF13188 PAS domain KM396_17640 PF00512 His Kinase A (phospho-acceptor) domain KM396_17640 PF00989 PAS fold KM396_17640 PF13426 PAS domain KM396_17640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_17645 PF01738 Dienelactone hydrolase family KM396_17650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM396_17655 PF00474 Sodium:solute symporter family KM396_17660 PF01645 Conserved region in glutamate synthase KM396_17665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM396_17670 PF02559 CarD-like/TRCF domain KM396_17675 PF00491 Arginase family KM396_17680 PF01979 Amidohydrolase family KM396_17685 PF01175 Urocanase Rossmann-like domain KM396_17685 PF17392 Urocanase C-terminal domain KM396_17685 PF17391 Urocanase N-terminal domain KM396_17690 PF00221 Aromatic amino acid lyase KM396_17695 PF09021 HutP KM396_17700 PF01209 ubiE/COQ5 methyltransferase family KM396_17720 PF11084 Protein of unknown function (DUF2621) KM396_17755 PF07301 Protein of unknown function (DUF1453) KM396_17760 PF02683 Cytochrome C biogenesis protein transmembrane region KM396_17770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM396_17770 PF03466 LysR substrate binding domain KM396_17775 PF03788 LrgA family KM396_17780 PF04172 LrgB-like family KM396_17785 PF13344 Haloacid dehalogenase-like hydrolase KM396_17785 PF00293 NUDIX domain KM396_17805 PF01510 N-acetylmuramoyl-L-alanine amidase KM396_17805 PF01471 Putative peptidoglycan binding domain KM396_17820 PF00664 ABC transporter transmembrane region KM396_17820 PF00005 ABC transporter KM396_17825 PF00005 ABC transporter KM396_17825 PF00664 ABC transporter transmembrane region KM396_17830 PF03672 Uncharacterised protein family (UPF0154) KM396_17835 PF10747 Sporulation inhibitor of replication protein SirA KM396_17840 PF02780 Transketolase, C-terminal domain KM396_17840 PF00456 Transketolase, thiamine diphosphate binding domain KM396_17840 PF02779 Transketolase, pyrimidine binding domain KM396_17845 PF01385 Probable transposase KM396_17845 PF12323 Helix-turn-helix domain KM396_17845 PF07282 Putative transposase DNA-binding domain KM396_17850 PF00528 Binding-protein-dependent transport system inner membrane component KM396_17855 PF00528 Binding-protein-dependent transport system inner membrane component KM396_17860 PF00005 ABC transporter KM396_17875 PF05979 Bacterial protein of unknown function (DUF896) KM396_17880 PF00239 Resolvase, N terminal domain KM396_17885 PF01726 LexA DNA binding domain KM396_17885 PF00717 Peptidase S24-like KM396_17900 PF03551 Transcriptional regulator PadR-like family KM396_17935 PF01471 Putative peptidoglycan binding domain KM396_17935 PF01510 N-acetylmuramoyl-L-alanine amidase KM396_17935 PF01476 LysM domain KM396_17940 PF05105 Bacteriophage holin family KM396_18095 PF08281 Sigma-70, region 4 KM396_18140 PF02511 Thymidylate synthase complementing protein KM396_18145 PF00145 C-5 cytosine-specific DNA methylase KM396_18220 PF01381 Helix-turn-helix KM396_18240 PF02899 Phage integrase, N-terminal SAM-like domain KM396_18240 PF00589 Phage integrase family KM396_18245 PF03951 Glutamine synthetase, beta-Grasp domain KM396_18245 PF00120 Glutamine synthetase, catalytic domain KM396_18250 PF13411 MerR HTH family regulatory protein KM396_18255 PF06838 Methionine gamma-lyase KM396_18265 PF03458 UPF0126 domain KM396_18275 PF00004 ATPase family associated with various cellular activities (AAA) KM396_18275 PF17866 AAA lid domain KM396_18290 PF17209 Hfq protein KM396_18305 PF01476 LysM domain KM396_18305 PF06725 3D domain KM396_18310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM396_18310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM396_18315 PF00294 pfkB family carbohydrate kinase KM396_18320 PF00455 DeoR C terminal sensor domain KM396_18320 PF08220 DeoR-like helix-turn-helix domain KM396_18330 PF04238 Protein of unknown function (DUF420) KM396_18340 PF00324 Amino acid permease KM396_18345 PF00041 Fibronectin type III domain KM396_18345 PF00704 Glycosyl hydrolases family 18 KM396_18355 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM396_18355 PF00149 Calcineurin-like phosphoesterase KM396_18360 PF01226 Formate/nitrite transporter KM396_18365 PF00216 Bacterial DNA-binding protein KM396_18370 PF00403 Heavy-metal-associated domain KM396_18375 PF00403 Heavy-metal-associated domain KM396_18380 PF02583 Metal-sensitive transcriptional repressor KM396_18390 PF00756 Putative esterase KM396_18395 PF00005 ABC transporter KM396_18400 PF01032 FecCD transport family KM396_18405 PF01032 FecCD transport family KM396_18415 PF03372 Endonuclease/Exonuclease/phosphatase family KM396_18420 PF02805 Metal binding domain of Ada KM396_18420 PF12833 Helix-turn-helix domain KM396_18425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM396_18425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM396_18430 PF00730 HhH-GPD superfamily base excision DNA repair protein KM396_18430 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain KM396_18435 PF01546 Peptidase family M20/M25/M40 KM396_18435 PF07687 Peptidase dimerisation domain KM396_18455 PF00561 alpha/beta hydrolase fold KM396_18460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM396_18465 PF00563 EAL domain KM396_18465 PF03707 Bacterial signalling protein N terminal repeat KM396_18465 PF00990 Diguanylate cyclase, GGDEF domain KM396_18475 PF10787 Uncharacterised protein from bacillus cereus group KM396_18480 PF04172 LrgB-like family KM396_18485 PF03788 LrgA family KM396_18490 PF00155 Aminotransferase class I and II KM396_18490 PF00392 Bacterial regulatory proteins, gntR family KM396_18495 PF00561 alpha/beta hydrolase fold KM396_18495 PF00364 Biotin-requiring enzyme KM396_18500 PF02585 GlcNAc-PI de-N-acetylase KM396_18515 PF00388 Phosphatidylinositol-specific phospholipase C, X domain KM396_18520 PF00082 Subtilase family KM396_18525 PF07486 Cell Wall Hydrolase KM396_18530 PF03275 UDP-galactopyranose mutase KM396_18535 PF00884 Sulfatase KM396_18540 PF00350 Dynamin family KM396_18550 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KM396_18555 PF00512 His Kinase A (phospho-acceptor) domain KM396_18555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_18560 PF00072 Response regulator receiver domain KM396_18560 PF00486 Transcriptional regulatory protein, C terminal KM396_18575 PF00005 ABC transporter KM396_18580 PF08676 MutL C terminal dimerisation domain KM396_18580 PF01119 DNA mismatch repair protein, C-terminal domain KM396_18585 PF01624 MutS domain I KM396_18585 PF05192 MutS domain III KM396_18585 PF05190 MutS family domain IV KM396_18585 PF05188 MutS domain II KM396_18585 PF00488 MutS domain V KM396_18590 PF10628 Outer spore coat protein E (CotE) KM396_18595 PF06133 Control of competence regulator ComK, YlbF/YmcA KM396_18600 PF01938 TRAM domain KM396_18600 PF00919 Uncharacterized protein family UPF0004 KM396_18600 PF04055 Radical SAM superfamily KM396_18605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM396_18610 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KM396_18610 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KM396_18610 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KM396_18615 PF01244 Membrane dipeptidase (Peptidase family M19) KM396_18620 PF04232 Stage V sporulation protein S (SpoVS) KM396_18625 PF13277 YmdB-like protein KM396_18630 PF12072 Domain of unknown function (DUF3552) KM396_18630 PF00013 KH domain KM396_18630 PF01966 HD domain KM396_18635 PF00154 recA bacterial DNA recombination protein KM396_18645 PF18146 Damage-inducible protein CinA KH domain KM396_18645 PF02464 Competence-damaged protein KM396_18645 PF00994 Probable molybdopterin binding domain KM396_18650 PF01066 CDP-alcohol phosphatidyltransferase KM396_18655 PF13464 Domain of unknown function (DUF4115) KM396_18660 PF11868 Protein of unknown function (DUF3388) KM396_18665 PF11588 Protein of unknown function (DUF3243) KM396_18675 PF00675 Insulinase (Peptidase family M16) KM396_18675 PF05193 Peptidase M16 inactive domain KM396_18680 PF05193 Peptidase M16 inactive domain KM396_18695 PF00005 ABC transporter KM396_18700 PF02608 ABC transporter substrate-binding protein PnrA-like KM396_18705 PF00392 Bacterial regulatory proteins, gntR family KM396_18705 PF07702 UTRA domain KM396_18710 PF01580 FtsK/SpoIIIE family KM396_18710 PF17854 FtsK alpha domain KM396_18710 PF09397 Ftsk gamma domain KM396_18715 PF14035 YlzJ-like protein KM396_18720 PF00574 Clp protease KM396_18725 PF17770 Ribonuclease J C-terminal domain KM396_18725 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM396_18725 PF00753 Metallo-beta-lactamase superfamily KM396_18730 PF00701 Dihydrodipicolinate synthetase family KM396_18735 PF13840 ACT domain KM396_18735 PF00696 Amino acid kinase family KM396_18740 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM396_18740 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM396_18745 PF02441 Flavoprotein KM396_18750 PF16924 Dipicolinate synthase subunit A N-terminal domain KM396_18750 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM396_18755 PF05239 PRC-barrel domain KM396_18760 PF00675 Insulinase (Peptidase family M16) KM396_18760 PF05193 Peptidase M16 inactive domain KM396_18765 PF01522 Polysaccharide deacetylase KM396_18770 PF00575 S1 RNA binding domain KM396_18770 PF03725 3' exoribonuclease family, domain 2 KM396_18770 PF01138 3' exoribonuclease family, domain 1 KM396_18770 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KM396_18770 PF00013 KH domain KM396_18775 PF00312 Ribosomal protein S15 KM396_18780 PF01687 Riboflavin kinase KM396_18780 PF06574 FAD synthetase KM396_18785 PF01509 TruB family pseudouridylate synthase (N terminal domain) KM396_18785 PF16198 tRNA pseudouridylate synthase B C-terminal domain KM396_18790 PF02033 Ribosome-binding factor A KM396_18795 PF04456 Protein of unknown function (DUF503) KM396_18800 PF00009 Elongation factor Tu GTP binding domain KM396_18800 PF11987 Translation-initiation factor 2 KM396_18800 PF04760 Translation initiation factor IF-2, N-terminal region KM396_18805 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM396_18810 PF04296 Protein of unknown function (DUF448) KM396_18815 PF13184 NusA-like KH domain KM396_18815 PF08529 NusA N-terminal domain KM396_18815 PF00575 S1 RNA binding domain KM396_18820 PF02576 RimP N-terminal domain KM396_18820 PF17384 RimP C-terminal SH3 domain KM396_18825 PF02811 PHP domain KM396_18825 PF14480 DNA polymerase III polC-type N-terminus I KM396_18825 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM396_18825 PF14579 Helix-hairpin-helix motif KM396_18825 PF11490 DNA polymerase III polC-type N-terminus II KM396_18825 PF00929 Exonuclease KM396_18825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM396_18830 PF03129 Anticodon binding domain KM396_18830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM396_18830 PF04073 Aminoacyl-tRNA editing domain KM396_18835 PF17820 PDZ domain KM396_18835 PF02163 Peptidase family M50 KM396_18840 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM396_18840 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM396_18840 PF13288 DXP reductoisomerase C-terminal domain KM396_18850 PF01255 Putative undecaprenyl diphosphate synthase KM396_18855 PF01765 Ribosome recycling factor KM396_18860 PF00696 Amino acid kinase family KM396_18865 PF00889 Elongation factor TS KM396_18870 PF00318 Ribosomal protein S2 KM396_18875 PF06018 CodY GAF-like domain KM396_18875 PF08222 CodY helix-turn-helix domain KM396_18880 PF00004 ATPase family associated with various cellular activities (AAA) KM396_18880 PF07724 AAA domain (Cdc48 subfamily) KM396_18880 PF10431 C-terminal, D2-small domain, of ClpB protein KM396_18885 PF00227 Proteasome subunit KM396_18890 PF02899 Phage integrase, N-terminal SAM-like domain KM396_18890 PF00589 Phage integrase family KM396_18895 PF01134 Glucose inhibited division protein A KM396_18900 PF01131 DNA topoisomerase KM396_18900 PF01396 Topoisomerase DNA binding C4 zinc finger KM396_18900 PF01751 Toprim domain KM396_18910 PF02629 CoA binding domain KM396_18910 PF00549 CoA-ligase KM396_18915 PF00549 CoA-ligase KM396_18915 PF08442 ATP-grasp domain KM396_18920 PF01351 Ribonuclease HII KM396_18925 PF01926 50S ribosome-binding GTPase KM396_18930 PF10502 Signal peptidase, peptidase S26 KM396_18935 PF01245 Ribosomal protein L19 KM396_18940 PF01746 tRNA (Guanine-1)-methyltransferase KM396_18945 PF05239 PRC-barrel domain KM396_18945 PF01782 RimM N-terminal domain KM396_18955 PF00886 Ribosomal protein S16 KM396_18960 PF02881 SRP54-type protein, helical bundle domain KM396_18960 PF00448 SRP54-type protein, GTPase domain KM396_18960 PF02978 Signal peptide binding domain KM396_18965 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KM396_18970 PF00448 SRP54-type protein, GTPase domain KM396_18970 PF02881 SRP54-type protein, helical bundle domain KM396_18975 PF02463 RecF/RecN/SMC N terminal domain KM396_18975 PF06470 SMC proteins Flexible Hinge Domain KM396_18980 PF00035 Double-stranded RNA binding motif KM396_18980 PF14622 Ribonuclease-III-like KM396_18985 PF00550 Phosphopantetheine attachment site KM396_18995 PF00698 Acyl transferase domain KM396_19000 PF02504 Fatty acid synthesis protein KM396_19005 PF03061 Thioesterase superfamily KM396_19010 PF00270 DEAD/DEAH box helicase KM396_19010 PF00271 Helicase conserved C-terminal domain KM396_19010 PF17191 RecG wedge domain KM396_19015 PF02734 DAK2 domain KM396_19015 PF13684 Dihydroxyacetone kinase family KM396_19020 PF03780 Asp23 family, cell envelope-related function KM396_19025 PF00830 Ribosomal L28 family KM396_19030 PF08183 Stage V sporulation protein family KM396_19035 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KM396_19035 PF04263 Thiamin pyrophosphokinase, catalytic domain KM396_19040 PF00834 Ribulose-phosphate 3 epimerase family KM396_19045 PF16745 RsgA N-terminal domain KM396_19045 PF03193 RsgA GTPase KM396_19050 PF03793 PASTA domain KM396_19050 PF00069 Protein kinase domain KM396_19060 PF04055 Radical SAM superfamily KM396_19065 PF01029 NusB family KM396_19065 PF01189 16S rRNA methyltransferase RsmB/F KM396_19070 PF00551 Formyl transferase KM396_19070 PF02911 Formyl transferase, C-terminal domain KM396_19075 PF01327 Polypeptide deformylase KM396_19080 PF00271 Helicase conserved C-terminal domain KM396_19080 PF18074 Primosomal protein N C-terminal domain KM396_19080 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KM396_19080 PF17764 3′ DNA-binding domain (3′BD) KM396_19080 PF04851 Type III restriction enzyme, res subunit KM396_19085 PF02441 Flavoprotein KM396_19085 PF04127 DNA / pantothenate metabolism flavoprotein KM396_19090 PF01192 RNA polymerase Rpb6 KM396_19095 PF00625 Guanylate kinase KM396_19100 PF04025 Domain of unknown function (DUF370) KM396_19105 PF08340 Domain of unknown function (DUF1732) KM396_19105 PF03755 YicC-like family, N-terminal region KM396_19110 PF00690 Cation transporter/ATPase, N-terminus KM396_19110 PF00689 Cation transporting ATPase, C-terminus KM396_19115 PF05670 NFACT protein RNA binding domain KM396_19120 PF00557 Metallopeptidase family M24 KM396_19120 PF01321 Creatinase/Prolidase N-terminal domain KM396_19150 PF00156 Phosphoribosyl transferase domain KM396_19155 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KM396_19160 PF01180 Dihydroorotate dehydrogenase KM396_19165 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KM396_19165 PF00175 Oxidoreductase NAD-binding domain KM396_19170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM396_19170 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KM396_19170 PF02142 MGS-like domain KM396_19175 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KM396_19175 PF00117 Glutamine amidotransferase class-I KM396_19180 PF01979 Amidohydrolase family KM396_19185 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM396_19185 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM396_19190 PF00860 Permease family KM396_19195 PF00156 Phosphoribosyl transferase domain KM396_19200 PF01479 S4 domain KM396_19200 PF00849 RNA pseudouridylate synthase KM396_19205 PF01252 Signal peptidase (SPase) II KM396_19215 PF08264 Anticodon-binding domain of tRNA KM396_19215 PF00133 tRNA synthetases class I (I, L, M and V) KM396_19215 PF06827 Zinc finger found in FPG and IleRS KM396_19220 PF05103 DivIVA protein KM396_19225 PF01479 S4 domain KM396_19225 PF17774 Putative RNA-binding domain in YlmH KM396_19230 PF02325 YGGT family KM396_19235 PF04472 Cell division protein SepF KM396_19240 PF01168 Alanine racemase, N-terminal domain KM396_19245 PF02578 Multi-copper polyphenol oxidoreductase laccase KM396_19250 PF05239 PRC-barrel domain KM396_19255 PF04539 Sigma-70 region 3 KM396_19255 PF04542 Sigma-70 region 2 KM396_19255 PF04545 Sigma-70, region 4 KM396_19260 PF04545 Sigma-70, region 4 KM396_19260 PF04542 Sigma-70 region 2 KM396_19265 PF03419 Sporulation factor SpoIIGA KM396_19270 PF00091 Tubulin/FtsZ family, GTPase domain KM396_19270 PF12327 FtsZ family, C-terminal domain KM396_19275 PF02491 SHS2 domain inserted in FTSA KM396_19280 PF08478 POTRA domain, FtsQ-type KM396_19280 PF03799 Cell division protein FtsQ KM396_19285 PF01565 FAD binding domain KM396_19285 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM396_19290 PF04101 Glycosyltransferase family 28 C-terminal domain KM396_19290 PF03033 Glycosyltransferase family 28 N-terminal domain KM396_19295 PF01098 Cell cycle protein KM396_19300 PF08245 Mur ligase middle domain KM396_19300 PF02875 Mur ligase family, glutamate ligase domain KM396_19305 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KM396_19305 PF00953 Glycosyl transferase family 4 KM396_19310 PF08245 Mur ligase middle domain KM396_19310 PF01225 Mur ligase family, catalytic domain KM396_19310 PF02875 Mur ligase family, glutamate ligase domain KM396_19315 PF03793 PASTA domain KM396_19315 PF03717 Penicillin-binding Protein dimerisation domain KM396_19315 PF00905 Penicillin binding protein transpeptidase domain KM396_19320 PF03717 Penicillin-binding Protein dimerisation domain KM396_19320 PF00905 Penicillin binding protein transpeptidase domain KM396_19320 PF03793 PASTA domain KM396_19325 PF04977 Septum formation initiator KM396_19330 PF01795 MraW methylase family KM396_19335 PF10079 Bacillithiol biosynthesis BshC KM396_19340 PF02558 Ketopantoate reductase PanE/ApbA KM396_19340 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM396_19345 PF00583 Acetyltransferase (GNAT) family KM396_19355 PF01783 Ribosomal L32p protein family KM396_19360 PF02620 Large ribosomal RNA subunit accumulation protein YceD KM396_19405 PF01510 N-acetylmuramoyl-L-alanine amidase KM396_19405 PF12123 N-acetylmuramoyl-l-alanine amidase KM396_19410 PF05105 Bacteriophage holin family KM396_19485 PF00574 Clp protease KM396_19495 PF03354 Phage Terminase KM396_19515 PF10137 Predicted nucleotide-binding protein containing TIR-like domain KM396_19520 PF00589 Phage integrase family KM396_19570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM396_19585 PF00692 dUTPase KM396_19600 PF04542 Sigma-70 region 2 KM396_19600 PF04539 Sigma-70 region 3 KM396_19600 PF04545 Sigma-70, region 4 KM396_19625 PF01695 IstB-like ATP binding protein KM396_19625 PF07319 Primosomal protein DnaI N-terminus KM396_19655 PF01381 Helix-turn-helix KM396_19670 PF01381 Helix-turn-helix KM396_19685 PF14659 Phage integrase, N-terminal SAM-like domain KM396_19685 PF00589 Phage integrase family KM396_19690 PF05636 HIGH Nucleotidyl Transferase KM396_19695 PF05362 Lon protease (S16) C-terminal proteolytic domain KM396_19695 PF13180 PDZ domain KM396_19700 PF01734 Patatin-like phospholipase KM396_19705 PF07670 Nucleoside recognition KM396_19710 PF01467 Cytidylyltransferase-like KM396_19725 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KM396_19730 PF06133 Control of competence regulator ComK, YlbF/YmcA KM396_19735 PF00300 Histidine phosphatase superfamily (branch 1) KM396_19740 PF14003 YlbE-like protein KM396_19745 PF14071 Putative coat protein KM396_19750 PF00188 Cysteine-rich secretory protein family KM396_19750 PF14504 CAP-associated N-terminal KM396_19755 PF08868 YugN-like family KM396_19760 PF00795 Carbon-nitrogen hydrolase KM396_19765 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KM396_19770 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KM396_19775 PF00510 Cytochrome c oxidase subunit III KM396_19780 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM396_19785 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM396_19785 PF00034 Cytochrome c KM396_19785 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KM396_19790 PF01040 UbiA prenyltransferase family KM396_19795 PF02628 Cytochrome oxidase assembly protein KM396_19800 PF02436 Conserved carboxylase domain KM396_19800 PF02785 Biotin carboxylase C-terminal domain KM396_19800 PF00289 Biotin carboxylase, N-terminal domain KM396_19800 PF00364 Biotin-requiring enzyme KM396_19800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM396_19800 PF00682 HMGL-like KM396_19805 PF01098 Cell cycle protein KM396_19810 PF07408 Protein of unknown function (DUF1507) KM396_19820 PF02562 PhoH-like protein KM396_19820 PF13638 PIN domain KM396_19830 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KM396_19840 PF14036 YlaH-like protein KM396_19845 PF00009 Elongation factor Tu GTP binding domain KM396_19845 PF14492 Elongation Factor G, domain II KM396_19845 PF03144 Elongation factor Tu domain 2 KM396_19845 PF00679 Elongation factor G C-terminus KM396_19855 PF00459 Inositol monophosphatase family KM396_19865 PF06335 Protein of unknown function (DUF1054) KM396_19870 PF05256 Uncharacterised protein family (UPF0223) KM396_19875 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM396_19875 PF01276 Orn/Lys/Arg decarboxylase, major domain KM396_19915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM396_19915 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_19920 PF00364 Biotin-requiring enzyme KM396_19920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM396_19920 PF02817 e3 binding domain KM396_19925 PF02779 Transketolase, pyrimidine binding domain KM396_19925 PF02780 Transketolase, C-terminal domain KM396_19930 PF00676 Dehydrogenase E1 component KM396_19940 PF01327 Polypeptide deformylase KM396_19950 PF07288 Protein of unknown function (DUF1447) KM396_19955 PF17770 Ribonuclease J C-terminal domain KM396_19955 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM396_19955 PF00753 Metallo-beta-lactamase superfamily KM396_19960 PF02080 TrkA-C domain KM396_19960 PF02254 TrkA-N domain KM396_19970 PF07687 Peptidase dimerisation domain KM396_19970 PF01546 Peptidase family M20/M25/M40 KM396_19975 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KM396_19975 PF00132 Bacterial transferase hexapeptide (six repeats) KM396_19975 PF14602 Hexapeptide repeat of succinyl-transferase KM396_19980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM396_19980 PF03466 LysR substrate binding domain KM396_19995 PF04308 Ribonuclease H-like KM396_20005 PF08796 Protein of unknown function (DUF1797) KM396_20020 PF00563 EAL domain KM396_20020 PF10388 EAL-domain associated signalling protein domain KM396_20030 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM396_20030 PF00149 Calcineurin-like phosphoesterase KM396_20040 PF02503 Polyphosphate kinase middle domain KM396_20040 PF13090 Polyphosphate kinase C-terminal domain 2 KM396_20040 PF17941 Polyphosphate kinase C-terminal domain 1 KM396_20040 PF13089 Polyphosphate kinase N-terminal domain KM396_20045 PF02541 Ppx/GppA phosphatase family KM396_20050 PF14177 YkyB-like protein KM396_20075 PF07690 Major Facilitator Superfamily KM396_20085 PF08267 Cobalamin-independent synthase, N-terminal domain KM396_20085 PF01717 Cobalamin-independent synthase, Catalytic domain KM396_20095 PF14040 Deoxyribonuclease NucA/NucB KM396_20105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_20105 PF00512 His Kinase A (phospho-acceptor) domain KM396_20115 PF00155 Aminotransferase class I and II KM396_20120 PF00356 Bacterial regulatory proteins, lacI family KM396_20120 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM396_20125 PF00528 Binding-protein-dependent transport system inner membrane component KM396_20130 PF00528 Binding-protein-dependent transport system inner membrane component KM396_20135 PF13416 Bacterial extracellular solute-binding protein KM396_20140 PF00128 Alpha amylase, catalytic domain KM396_20140 PF02903 Alpha amylase, N-terminal ig-like domain KM396_20140 PF16657 Maltogenic Amylase, C-terminal domain KM396_20145 PF00128 Alpha amylase, catalytic domain KM396_20145 PF16657 Maltogenic Amylase, C-terminal domain KM396_20150 PF00005 ABC transporter KM396_20150 PF17912 MalK OB fold domain KM396_20150 PF03459 TOBE domain KM396_20190 PF02803 Thiolase, C-terminal domain KM396_20190 PF00108 Thiolase, N-terminal domain KM396_20195 PF00293 NUDIX domain KM396_20225 PF03551 Transcriptional regulator PadR-like family KM396_20240 PF01008 Initiation factor 2 subunit family KM396_20245 PF01636 Phosphotransferase enzyme family KM396_20250 PF00795 Carbon-nitrogen hydrolase KM396_20255 PF00155 Aminotransferase class I and II KM396_20260 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KM396_20260 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KM396_20270 PF00596 Class II Aldolase and Adducin N-terminal domain KM396_20275 PF03079 ARD/ARD' family KM396_20295 PF08448 PAS fold KM396_20295 PF00990 Diguanylate cyclase, GGDEF domain KM396_20300 PF00881 Nitroreductase family KM396_20315 PF05524 PEP-utilising enzyme, N-terminal KM396_20315 PF00391 PEP-utilising enzyme, mobile domain KM396_20315 PF02896 PEP-utilising enzyme, TIM barrel domain KM396_20320 PF00381 PTS HPr component phosphorylation site KM396_20325 PF02378 Phosphotransferase system, EIIC KM396_20325 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM396_20325 PF00367 phosphotransferase system, EIIB KM396_20330 PF03123 CAT RNA binding domain KM396_20330 PF00874 PRD domain KM396_20340 PF00392 Bacterial regulatory proteins, gntR family KM396_20340 PF07702 UTRA domain KM396_20345 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KM396_20350 PF01979 Amidohydrolase family KM396_20360 PF04079 Segregation and condensation complex subunit ScpB KM396_20365 PF02616 Segregation and condensation protein ScpA KM396_20375 PF03745 Domain of unknown function (DUF309) KM396_20380 PF00583 Acetyltransferase (GNAT) family KM396_20385 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KM396_20390 PF06207 Protein of unknown function (DUF1002) KM396_20400 PF03323 Bacillus/Clostridium GerA spore germination protein KM396_20405 PF14097 Stage V sporulation protein AE1 KM396_20410 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM396_20415 PF07451 Stage V sporulation protein AD (SpoVAD) KM396_20420 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM396_20425 PF13782 Stage V sporulation protein AB KM396_20430 PF12164 Stage V sporulation protein AA KM396_20440 PF00209 Sodium:neurotransmitter symporter family KM396_20445 PF04545 Sigma-70, region 4 KM396_20445 PF04539 Sigma-70 region 3 KM396_20445 PF04542 Sigma-70 region 2 KM396_20450 PF13581 Histidine kinase-like ATPase domain KM396_20455 PF01740 STAS domain KM396_20460 PF00768 D-alanyl-D-alanine carboxypeptidase KM396_20460 PF07943 Penicillin-binding protein 5, C-terminal domain KM396_20465 PF00392 Bacterial regulatory proteins, gntR family KM396_20470 PF00005 ABC transporter KM396_20485 PF01047 MarR family KM396_20495 PF00860 Permease family KM396_20500 PF01544 CorA-like Mg2+ transporter protein KM396_20505 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM396_20505 PF02885 Glycosyl transferase family, helical bundle domain KM396_20505 PF00591 Glycosyl transferase family, a/b domain KM396_20510 PF01048 Phosphorylase superfamily KM396_20515 PF01676 Metalloenzyme superfamily KM396_20525 PF02899 Phage integrase, N-terminal SAM-like domain KM396_20525 PF00589 Phage integrase family KM396_20530 PF14004 Protein of unknown function (DUF4227) KM396_20535 PF01475 Ferric uptake regulator family KM396_20540 PF01944 Stage II sporulation protein M KM396_20550 PF00293 NUDIX domain KM396_20555 PF13072 Mother cell inhibitor of FtsZ KM396_20560 PF00248 Aldo/keto reductase family KM396_20565 PF00248 Aldo/keto reductase family KM396_20570 PF13673 Acetyltransferase (GNAT) domain KM396_20570 PF04229 GrpB protein KM396_20580 PF00565 Staphylococcal nuclease homologue KM396_20580 PF00149 Calcineurin-like phosphoesterase KM396_20580 PF02872 5'-nucleotidase, C-terminal domain KM396_20580 PF00746 LPXTG cell wall anchor motif KM396_20590 PF12146 Serine aminopeptidase, S33 KM396_20595 PF03553 Na+/H+ antiporter family KM396_20595 PF13726 Na+-H+ antiporter family KM396_20600 PF00356 Bacterial regulatory proteins, lacI family KM396_20605 PF00583 Acetyltransferase (GNAT) family KM396_20610 PF12146 Serine aminopeptidase, S33 KM396_20615 PF10827 Protein of unknown function (DUF2552) KM396_20625 PF01872 RibD C-terminal domain KM396_20625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM396_20630 PF00677 Lumazine binding domain KM396_20635 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KM396_20635 PF00925 GTP cyclohydrolase II KM396_20640 PF00885 6,7-dimethyl-8-ribityllumazine synthase KM396_20650 PF04055 Radical SAM superfamily KM396_20650 PF06968 Biotin and Thiamin Synthesis associated domain KM396_20655 PF13847 Methyltransferase domain KM396_20660 PF08241 Methyltransferase domain KM396_20660 PF12697 Alpha/beta hydrolase family KM396_20665 PF00155 Aminotransferase class I and II KM396_20675 PF00202 Aminotransferase class-III KM396_20685 PF03553 Na+/H+ antiporter family KM396_20690 PF00149 Calcineurin-like phosphoesterase KM396_20690 PF02872 5'-nucleotidase, C-terminal domain KM396_20700 PF01037 Lrp/AsnC ligand binding domain KM396_20700 PF13404 AsnC-type helix-turn-helix domain KM396_20715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM396_20715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM396_20720 PF00202 Aminotransferase class-III KM396_20725 PF00696 Amino acid kinase family KM396_20730 PF01960 ArgJ family KM396_20735 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM396_20735 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM396_20745 PF00106 short chain dehydrogenase KM396_20755 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM396_20755 PF03807 NADP oxidoreductase coenzyme F420-dependent KM396_20760 PF03313 Serine dehydratase alpha chain KM396_20765 PF03315 Serine dehydratase beta chain KM396_20765 PF01842 ACT domain KM396_20775 PF00753 Metallo-beta-lactamase superfamily KM396_20775 PF12706 Beta-lactamase superfamily domain KM396_20785 PF11798 IMS family HHH motif KM396_20785 PF11799 impB/mucB/samB family C-terminal domain KM396_20785 PF00817 impB/mucB/samB family KM396_20795 PF01546 Peptidase family M20/M25/M40 KM396_20795 PF07687 Peptidase dimerisation domain KM396_20800 PF13302 Acetyltransferase (GNAT) domain KM396_20815 PF03734 L,D-transpeptidase catalytic domain KM396_20820 PF06081 Aromatic acid exporter family member 1 KM396_20820 PF11728 Putative aromatic acid exporter C-terminal domain KM396_20825 PF00005 ABC transporter KM396_20830 PF00528 Binding-protein-dependent transport system inner membrane component KM396_20835 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM396_20840 PF06491 Disulphide isomerase KM396_20845 PF11208 Protein of unknown function (DUF2992) KM396_20855 PF01098 Cell cycle protein KM396_20860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM396_20860 PF02817 e3 binding domain KM396_20860 PF00364 Biotin-requiring enzyme KM396_20865 PF02780 Transketolase, C-terminal domain KM396_20865 PF02779 Transketolase, pyrimidine binding domain KM396_20870 PF00676 Dehydrogenase E1 component KM396_20875 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_20875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM396_20880 PF00871 Acetokinase family KM396_20885 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM396_20885 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM396_20890 PF01515 Phosphate acetyl/butaryl transferase KM396_20895 PF00158 Sigma-54 interaction domain KM396_20895 PF02954 Bacterial regulatory protein, Fis family KM396_20895 PF00989 PAS fold KM396_20905 PF03009 Glycerophosphoryl diester phosphodiesterase family KM396_20910 PF14174 YycC-like protein KM396_20920 PF00072 Response regulator receiver domain KM396_20920 PF08769 Sporulation initiation factor Spo0A C terminal KM396_20925 PF05580 SpoIVB peptidase S55 KM396_20925 PF17820 PDZ domain KM396_20930 PF13476 AAA domain KM396_20935 PF01316 Arginine repressor, DNA binding domain KM396_20935 PF02863 Arginine repressor, C-terminal domain KM396_20940 PF01728 FtsJ-like methyltransferase KM396_20940 PF01479 S4 domain KM396_20945 PF02780 Transketolase, C-terminal domain KM396_20945 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KM396_20945 PF02779 Transketolase, pyrimidine binding domain KM396_20950 PF00348 Polyprenyl synthetase KM396_20955 PF02609 Exonuclease VII small subunit KM396_20960 PF02601 Exonuclease VII, large subunit KM396_20960 PF13742 OB-fold nucleic acid binding domain KM396_20965 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KM396_20965 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KM396_20970 PF01029 NusB family KM396_20975 PF03780 Asp23 family, cell envelope-related function KM396_20980 PF02785 Biotin carboxylase C-terminal domain KM396_20980 PF00289 Biotin carboxylase, N-terminal domain KM396_20980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM396_20985 PF00364 Biotin-requiring enzyme KM396_20995 PF12685 SpoIIIAH-like protein KM396_21005 PF09581 Stage III sporulation protein AF (Spore_III_AF) KM396_21010 PF09546 Stage III sporulation protein AE (spore_III_AE) KM396_21015 PF06686 Stage III sporulation protein AC/AD protein family KM396_21020 PF06686 Stage III sporulation protein AC/AD protein family KM396_21025 PF09548 Stage III sporulation protein AB (spore_III_AB) KM396_21050 PF08207 Elongation factor P (EF-P) KOW-like domain KM396_21050 PF09285 Elongation factor P, C-terminal KM396_21050 PF01132 Elongation factor P (EF-P) OB domain KM396_21055 PF00557 Metallopeptidase family M24 KM396_21055 PF01321 Creatinase/Prolidase N-terminal domain KM396_21060 PF01220 Dehydroquinase class II KM396_21065 PF11085 Conserved membrane protein YqhR KM396_21070 PF07136 Protein of unknown function (DUF1385) KM396_21080 PF13419 Haloacid dehalogenase-like hydrolase KM396_21085 PF01325 Iron dependent repressor, N-terminal DNA binding domain KM396_21085 PF02742 Iron dependent repressor, metal binding and dimerisation domain KM396_21100 PF03099 Biotin/lipoate A/B protein ligase family KM396_21105 PF00581 Rhodanese-like domain KM396_21110 PF00356 Bacterial regulatory proteins, lacI family KM396_21110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM396_21120 PF00893 Small Multidrug Resistance protein KM396_21125 PF00893 Small Multidrug Resistance protein KM396_21160 PF00005 ABC transporter KM396_21165 PF00392 Bacterial regulatory proteins, gntR family KM396_21180 PF02347 Glycine cleavage system P-protein KM396_21185 PF02347 Glycine cleavage system P-protein KM396_21190 PF01571 Aminomethyltransferase folate-binding domain KM396_21190 PF08669 Glycine cleavage T-protein C-terminal barrel domain KM396_21195 PF00176 SNF2 family N-terminal domain KM396_21195 PF00271 Helicase conserved C-terminal domain KM396_21200 PF11079 Bacterial protein YqhG of unknown function KM396_21220 PF14038 YqzE-like protein KM396_21225 PF01202 Shikimate kinase KM396_21250 PF07963 Prokaryotic N-terminal methylation motif KM396_21260 PF00482 Type II secretion system (T2SS), protein F KM396_21265 PF00437 Type II/IV secretion system protein KM396_21275 PF11117 Protein of unknown function (DUF2626) KM396_21280 PF00375 Sodium:dicarboxylate symporter family KM396_21315 PF03033 Glycosyltransferase family 28 N-terminal domain KM396_21315 PF04101 Glycosyltransferase family 28 C-terminal domain KM396_21320 PF02574 Homocysteine S-methyltransferase KM396_21320 PF00809 Pterin binding enzyme KM396_21320 PF02310 B12 binding domain KM396_21320 PF02607 B12 binding domain KM396_21320 PF02965 Vitamin B12 dependent methionine synthase, activation domain KM396_21325 PF02219 Methylenetetrahydrofolate reductase KM396_21325 PF02574 Homocysteine S-methyltransferase KM396_21330 PF01053 Cys/Met metabolism PLP-dependent enzyme KM396_21335 PF01053 Cys/Met metabolism PLP-dependent enzyme KM396_21345 PF01022 Bacterial regulatory protein, arsR family KM396_21355 PF00753 Metallo-beta-lactamase superfamily KM396_21360 PF10958 Protein of unknown function (DUF2759) KM396_21365 PF00480 ROK family KM396_21370 PF06014 Bacterial protein of unknown function (DUF910) KM396_21375 PF01812 5-formyltetrahydrofolate cyclo-ligase family KM396_21380 PF00471 Ribosomal protein L33 KM396_21385 PF00483 Nucleotidyl transferase KM396_21390 PF01895 PhoU domain KM396_21395 PF00005 ABC transporter KM396_21400 PF00528 Binding-protein-dependent transport system inner membrane component KM396_21405 PF00528 Binding-protein-dependent transport system inner membrane component KM396_21410 PF12849 PBP superfamily domain KM396_21415 PF00905 Penicillin binding protein transpeptidase domain KM396_21415 PF03717 Penicillin-binding Protein dimerisation domain KM396_21420 PF07690 Major Facilitator Superfamily KM396_21425 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM396_21425 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM396_21445 PF04551 GcpE protein KM396_21450 PF01475 Ferric uptake regulator family KM396_21455 PF00950 ABC 3 transport family KM396_21460 PF00005 ABC transporter KM396_21465 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM396_21465 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM396_21470 PF11116 Protein of unknown function (DUF2624) KM396_21475 PF01261 Xylose isomerase-like TIM barrel KM396_21480 PF00270 DEAD/DEAH box helicase KM396_21480 PF00271 Helicase conserved C-terminal domain KM396_21490 PF02401 LytB protein KM396_21495 PF01784 NIF3 (NGG1p interacting factor 3) KM396_21500 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KM396_21505 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM396_21510 PF03979 Sigma-70 factor, region 1.1 KM396_21510 PF00140 Sigma-70 factor, region 1.2 KM396_21510 PF04539 Sigma-70 region 3 KM396_21510 PF04542 Sigma-70 region 2 KM396_21510 PF04545 Sigma-70, region 4 KM396_21515 PF10410 DnaB-helicase binding domain of primase KM396_21515 PF08275 DNA primase catalytic core, N-terminal domain KM396_21515 PF01807 CHC2 zinc finger KM396_21520 PF03618 Kinase/pyrophosphorylase KM396_21525 PF00571 CBS domain KM396_21525 PF08279 HTH domain KM396_21530 PF02565 Recombination protein O C terminal KM396_21530 PF11967 Recombination protein O N terminal KM396_21540 PF07650 KH domain KM396_21540 PF01926 50S ribosome-binding GTPase KM396_21545 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM396_21550 PF01219 Prokaryotic diacylglycerol kinase KM396_21555 PF02130 Uncharacterized protein family UPF0054 KM396_21560 PF07698 7TM receptor with intracellular HD hydrolase KM396_21560 PF07697 7TM-HD extracellular KM396_21560 PF01966 HD domain KM396_21565 PF02562 PhoH-like protein KM396_21570 PF06898 Putative stage IV sporulation protein YqfD KM396_21575 PF07873 YabP family KM396_21580 PF09424 Yqey-like protein KM396_21585 PF01165 Ribosomal protein S21 KM396_21590 PF04055 Radical SAM superfamily KM396_21590 PF00919 Uncharacterized protein family UPF0004 KM396_21590 PF01938 TRAM domain KM396_21595 PF04452 RNA methyltransferase KM396_21605 PF00226 DnaJ domain KM396_21605 PF01556 DnaJ C terminal domain KM396_21605 PF00684 DnaJ central domain KM396_21610 PF00012 Hsp70 protein KM396_21615 PF01025 GrpE KM396_21620 PF01628 HrcA protein C terminal domain KM396_21625 PF06969 HemN C-terminal domain KM396_21625 PF04055 Radical SAM superfamily KM396_21630 PF01638 HxlR-like helix-turn-helix KM396_21635 PF06421 GTP-binding protein LepA C-terminus KM396_21635 PF03144 Elongation factor Tu domain 2 KM396_21635 PF00009 Elongation factor Tu GTP binding domain KM396_21635 PF00679 Elongation factor G C-terminus KM396_21645 PF03418 Germination protease KM396_21650 PF01649 Ribosomal protein S20 KM396_21655 PF06144 DNA polymerase III, delta subunit KM396_21660 PF14141 YqzM-like protein KM396_21665 PF00753 Metallo-beta-lactamase superfamily KM396_21665 PF13567 Domain of unknown function (DUF4131) KM396_21665 PF03772 Competence protein KM396_21670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM396_21675 PF10531 SLBB domain KM396_21680 PF03807 NADP oxidoreductase coenzyme F420-dependent KM396_21680 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM396_21685 PF13649 Methyltransferase domain KM396_21695 PF01966 HD domain KM396_21700 PF01467 Cytidylyltransferase-like KM396_21705 PF01985 CRS1 / YhbY (CRM) domain KM396_21710 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KM396_21710 PF01488 Shikimate / quinate 5-dehydrogenase KM396_21710 PF08501 Shikimate dehydrogenase substrate binding domain KM396_21715 PF01926 50S ribosome-binding GTPase KM396_21730 PF02666 Phosphatidylserine decarboxylase KM396_21735 PF04545 Sigma-70, region 4 KM396_21735 PF04542 Sigma-70 region 2 KM396_21745 PF16244 Domain of unknown function (DUF4901) KM396_21750 PF00471 Ribosomal protein L33 KM396_21755 PF00881 Nitroreductase family KM396_21760 PF04607 Region found in RelA / SpoT proteins KM396_21770 PF00245 Alkaline phosphatase KM396_21780 PF08386 TAP-like protein KM396_21780 PF00561 alpha/beta hydrolase fold KM396_21815 PF02225 PA domain KM396_21815 PF00082 Subtilase family KM396_21815 PF13860 FlgD Ig-like domain KM396_21815 PF05922 Peptidase inhibitor I9 KM396_21820 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KM396_21835 PF07681 DoxX KM396_21865 PF00005 ABC transporter KM396_21870 PF01032 FecCD transport family KM396_21875 PF01497 Periplasmic binding protein KM396_21880 PF14143 YrhC-like protein KM396_21885 PF00171 Aldehyde dehydrogenase family KM396_21885 PF00465 Iron-containing alcohol dehydrogenase KM396_21890 PF01053 Cys/Met metabolism PLP-dependent enzyme KM396_21895 PF00291 Pyridoxal-phosphate dependent enzyme KM396_21900 PF01048 Phosphorylase superfamily KM396_21905 PF08241 Methyltransferase domain KM396_21920 PF03717 Penicillin-binding Protein dimerisation domain KM396_21920 PF00905 Penicillin binding protein transpeptidase domain KM396_21925 PF03449 Transcription elongation factor, N-terminal KM396_21925 PF01272 Transcription elongation factor, GreA/GreB, C-term KM396_21930 PF00485 Phosphoribulokinase / Uridine kinase family KM396_21935 PF01136 Peptidase family U32 KM396_21935 PF16325 Peptidase family U32 C-terminal domain KM396_21940 PF01136 Peptidase family U32 KM396_21945 PF01596 O-methyltransferase KM396_21950 PF02618 YceG-like family KM396_21955 PF06949 Protein of unknown function (DUF1292) KM396_21960 PF03652 Holliday junction resolvase KM396_21965 PF06135 IreB regulatory phosphoprotein KM396_21970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM396_21970 PF01411 tRNA synthetases class II (A) KM396_21970 PF02272 DHHA1 domain KM396_21980 PF01594 AI-2E family transporter KM396_22000 PF14490 Helix-hairpin-helix containing domain KM396_22000 PF13538 UvrD-like helicase C-terminal domain KM396_22000 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KM396_22015 PF00266 Aminotransferase class-V KM396_22020 PF02082 Transcriptional regulator KM396_22025 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM396_22025 PF12002 MgsA AAA+ ATPase C terminal KM396_22025 PF16193 AAA C-terminal domain KM396_22035 PF00899 ThiF family KM396_22040 PF00152 tRNA synthetases class II (D, K and N) KM396_22040 PF01336 OB-fold nucleic acid binding domain KM396_22040 PF02938 GAD domain KM396_22045 PF03129 Anticodon binding domain KM396_22045 PF13393 Histidyl-tRNA synthetase KM396_22055 PF02580 D-Tyr-tRNA(Tyr) deacylase KM396_22060 PF13291 ACT domain KM396_22060 PF04607 Region found in RelA / SpoT proteins KM396_22060 PF02824 TGS domain KM396_22065 PF00156 Phosphoribosyl transferase domain KM396_22070 PF01368 DHH family KM396_22070 PF02272 DHHA1 domain KM396_22070 PF17768 RecJ OB domain KM396_22070 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KM396_22075 PF01545 Cation efflux family KM396_22075 PF16916 Dimerisation domain of Zinc Transporter KM396_22080 PF07549 SecD/SecF GG Motif KM396_22080 PF02355 Protein export membrane protein KM396_22085 PF13797 Post-transcriptional regulator KM396_22090 PF14667 Polysaccharide biosynthesis C-terminal domain KM396_22090 PF01943 Polysaccharide biosynthesis protein KM396_22095 PF04239 Protein of unknown function (DUF421) KM396_22105 PF02699 Preprotein translocase subunit KM396_22110 PF01702 Queuine tRNA-ribosyltransferase KM396_22115 PF02547 Queuosine biosynthesis protein KM396_22120 PF11146 Protein of unknown function (DUF2905) KM396_22125 PF17864 RuvB AAA lid domain KM396_22125 PF05491 RuvB C-terminal winged helix domain KM396_22125 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM396_22130 PF07499 RuvA, C-terminal domain KM396_22130 PF01330 RuvA N terminal domain KM396_22135 PF01497 Periplasmic binding protein KM396_22145 PF00892 EamA-like transporter family KM396_22150 PF00892 EamA-like transporter family KM396_22155 PF01022 Bacterial regulatory protein, arsR family KM396_22170 PF01476 LysM domain KM396_22175 PF02445 Quinolinate synthetase A protein KM396_22180 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KM396_22180 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KM396_22185 PF02910 Fumarate reductase flavoprotein C-term KM396_22185 PF00890 FAD binding domain KM396_22190 PF00266 Aminotransferase class-V KM396_22195 PF02829 3H domain KM396_22195 PF08279 HTH domain KM396_22200 PF03473 MOSC domain KM396_22200 PF03475 3-alpha domain KM396_22205 PF01842 ACT domain KM396_22205 PF00800 Prephenate dehydratase KM396_22210 PF02687 FtsX-like permease family KM396_22215 PF02687 FtsX-like permease family KM396_22220 PF00005 ABC transporter KM396_22230 PF00072 Response regulator receiver domain KM396_22230 PF00486 Transcriptional regulatory protein, C terminal KM396_22235 PF01926 50S ribosome-binding GTPase KM396_22235 PF01018 GTP1/OBG KM396_22235 PF09269 Domain of unknown function (DUF1967) KM396_22240 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM396_22240 PF14682 Sporulation initiation phospho-transferase B, C-terminal KM396_22245 PF01016 Ribosomal L27 protein KM396_22250 PF04327 Cysteine protease Prp KM396_22255 PF00829 Ribosomal prokaryotic L21 protein KM396_22260 PF10150 Ribonuclease E/G family KM396_22260 PF00575 S1 RNA binding domain KM396_22265 PF02163 Peptidase family M50 KM396_22270 PF01551 Peptidase family M23 KM396_22275 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KM396_22280 PF03775 Septum formation inhibitor MinC, C-terminal domain KM396_22290 PF04085 rod shape-determining protein MreC KM396_22300 PF04002 RadC-like JAB domain KM396_22305 PF02545 Maf-like protein KM396_22315 PF08245 Mur ligase middle domain KM396_22315 PF02875 Mur ligase family, glutamate ligase domain KM396_22320 PF10458 Valyl tRNA synthetase tRNA binding arm KM396_22320 PF00133 tRNA synthetases class I (I, L, M and V) KM396_22320 PF08264 Anticodon-binding domain of tRNA KM396_22330 PF01476 LysM domain KM396_22335 PF00202 Aminotransferase class-III KM396_22340 PF00490 Delta-aminolevulinic acid dehydratase KM396_22345 PF02602 Uroporphyrinogen-III synthase HemD KM396_22350 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KM396_22350 PF03900 Porphobilinogen deaminase, C-terminal domain KM396_22355 PF01578 Cytochrome C assembly protein KM396_22360 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KM396_22360 PF01488 Shikimate / quinate 5-dehydrogenase KM396_22360 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KM396_22365 PF01047 MarR family KM396_22370 PF02566 OsmC-like protein KM396_22375 PF01926 50S ribosome-binding GTPase KM396_22380 PF02190 ATP-dependent protease La (LON) substrate-binding domain KM396_22380 PF05362 Lon protease (S16) C-terminal proteolytic domain KM396_22380 PF00004 ATPase family associated with various cellular activities (AAA) KM396_22385 PF05362 Lon protease (S16) C-terminal proteolytic domain KM396_22385 PF00004 ATPase family associated with various cellular activities (AAA) KM396_22390 PF06689 ClpX C4-type zinc finger KM396_22390 PF10431 C-terminal, D2-small domain, of ClpB protein KM396_22390 PF07724 AAA domain (Cdc48 subfamily) KM396_22395 PF05697 Bacterial trigger factor protein (TF) KM396_22395 PF05698 Bacterial trigger factor protein (TF) C-terminus KM396_22395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM396_22410 PF11724 YvbH-like oligomerisation region KM396_22410 PF08000 Bacterial PH domain KM396_22430 PF12850 Calcineurin-like phosphoesterase superfamily domain KM396_22435 PF01725 Ham1 family KM396_22440 PF01138 3' exoribonuclease family, domain 1 KM396_22440 PF03725 3' exoribonuclease family, domain 2 KM396_22445 PF10646 Sporulation and spore germination KM396_22450 PF01177 Asp/Glu/Hydantoin racemase KM396_22455 PF07690 Major Facilitator Superfamily KM396_22465 PF00440 Bacterial regulatory proteins, tetR family KM396_22480 PF00196 Bacterial regulatory proteins, luxR family KM396_22485 PF00860 Permease family KM396_22495 PF07969 Amidohydrolase family KM396_22500 PF07969 Amidohydrolase family KM396_22505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_22510 PF12911 N-terminal TM domain of oligopeptide transport permease C KM396_22510 PF00528 Binding-protein-dependent transport system inner membrane component KM396_22515 PF00528 Binding-protein-dependent transport system inner membrane component KM396_22520 PF00005 ABC transporter KM396_22520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM396_22525 PF00005 ABC transporter KM396_22525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM396_22530 PF07694 5TMR of 5TMR-LYT KM396_22530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_22530 PF06580 Histidine kinase KM396_22535 PF04397 LytTr DNA-binding domain KM396_22535 PF00072 Response regulator receiver domain KM396_22550 PF04024 PspC domain KM396_22555 PF01381 Helix-turn-helix KM396_22555 PF07883 Cupin domain KM396_22560 PF13536 Putative multidrug resistance efflux transporter KM396_22565 PF00230 Major intrinsic protein KM396_22570 PF02082 Transcriptional regulator KM396_22580 PF13732 Domain of unknown function (DUF4162) KM396_22580 PF00005 ABC transporter KM396_22585 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KM396_22595 PF01618 MotA/TolQ/ExbB proton channel family KM396_22600 PF02557 D-alanyl-D-alanine carboxypeptidase KM396_22605 PF03061 Thioesterase superfamily KM396_22610 PF13085 2Fe-2S iron-sulfur cluster binding domain KM396_22610 PF13183 4Fe-4S dicluster domain KM396_22615 PF00890 FAD binding domain KM396_22615 PF02910 Fumarate reductase flavoprotein C-term KM396_22620 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KM396_22625 PF10702 Protein of unknown function (DUF2507) KM396_22630 PF01541 GIY-YIG catalytic domain KM396_22630 PF02151 UvrB/uvrC motif KM396_22630 PF08459 UvrC Helix-hairpin-helix N-terminal KM396_22635 PF00085 Thioredoxin KM396_22640 PF01012 Electron transfer flavoprotein domain KM396_22640 PF00766 Electron transfer flavoprotein FAD-binding domain KM396_22645 PF01012 Electron transfer flavoprotein domain KM396_22650 PF00378 Enoyl-CoA hydratase/isomerase KM396_22655 PF00440 Bacterial regulatory proteins, tetR family KM396_22655 PF08359 YsiA-like protein, C-terminal region KM396_22660 PF13193 AMP-binding enzyme C-terminal domain KM396_22660 PF00501 AMP-binding enzyme KM396_22670 PF01497 Periplasmic binding protein KM396_22675 PF01032 FecCD transport family KM396_22680 PF05163 DinB family KM396_22710 PF00005 ABC transporter KM396_22715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_22715 PF00512 His Kinase A (phospho-acceptor) domain KM396_22720 PF00486 Transcriptional regulatory protein, C terminal KM396_22720 PF00072 Response regulator receiver domain KM396_22730 PF09962 Uncharacterized conserved protein (DUF2196) KM396_22735 PF10672 S-adenosylmethionine-dependent methyltransferase KM396_22735 PF17785 PUA-like domain KM396_22745 PF03992 Antibiotic biosynthesis monooxygenase KM396_22750 PF04203 Sortase domain KM396_22755 PF00005 ABC transporter KM396_22760 PF01032 FecCD transport family KM396_22765 PF01497 Periplasmic binding protein KM396_22770 PF05031 Iron Transport-associated domain KM396_22780 PF05031 Iron Transport-associated domain KM396_22785 PF05525 Branched-chain amino acid transport protein KM396_22790 PF00849 RNA pseudouridylate synthase KM396_22790 PF01479 S4 domain KM396_22795 PF00488 MutS domain V KM396_22795 PF01713 Smr domain KM396_22800 PF02811 PHP domain KM396_22800 PF14716 Helix-hairpin-helix domain KM396_22800 PF14791 DNA polymerase beta thumb KM396_22805 PF02674 Colicin V production protein KM396_22810 PF05164 Cell division protein ZapA KM396_22815 PF11858 Domain of unknown function (DUF3378) KM396_22815 PF01351 Ribonuclease HII KM396_22835 PF00152 tRNA synthetases class II (D, K and N) KM396_22835 PF01336 OB-fold nucleic acid binding domain KM396_22840 PF03483 B3/4 domain KM396_22840 PF03484 tRNA synthetase B5 domain KM396_22840 PF03147 Ferredoxin-fold anticodon binding domain KM396_22840 PF01588 Putative tRNA binding domain KM396_22840 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KM396_22845 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KM396_22845 PF01409 tRNA synthetases class II core domain (F) KM396_22850 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM396_22850 PF00588 SpoU rRNA Methylase family KM396_22855 PF14098 Small, acid-soluble spore protein I KM396_22860 PF01966 HD domain KM396_22885 PF07690 Major Facilitator Superfamily KM396_22895 PF16859 Tetracyclin repressor-like, C-terminal domain KM396_22895 PF00440 Bacterial regulatory proteins, tetR family KM396_22900 PF05343 M42 glutamyl aminopeptidase KM396_22910 PF00453 Ribosomal protein L20 KM396_22915 PF01632 Ribosomal protein L35 KM396_22920 PF00707 Translation initiation factor IF-3, C-terminal domain KM396_22920 PF05198 Translation initiation factor IF-3, N-terminal domain KM396_22925 PF03129 Anticodon binding domain KM396_22925 PF02824 TGS domain KM396_22925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM396_22925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM396_22930 PF08812 YtxC-like family KM396_22935 PF01695 IstB-like ATP binding protein KM396_22935 PF07319 Primosomal protein DnaI N-terminus KM396_22940 PF07261 Replication initiation and membrane attachment KM396_22945 PF03477 ATP cone domain KM396_22950 PF02675 S-adenosylmethionine decarboxylase KM396_22955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM396_22955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM396_22960 PF01121 Dephospho-CoA kinase KM396_22965 PF02659 Putative manganese efflux pump KM396_22970 PF06827 Zinc finger found in FPG and IleRS KM396_22970 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KM396_22970 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KM396_22975 PF00476 DNA polymerase family A KM396_22975 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM396_22975 PF01367 5'-3' exonuclease, C-terminal SAM fold KM396_22980 PF00989 PAS fold KM396_22980 PF16736 Single Cache-like KM396_22980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_22980 PF00512 His Kinase A (phospho-acceptor) domain KM396_22985 PF00486 Transcriptional regulatory protein, C terminal KM396_22985 PF00072 Response regulator receiver domain KM396_23000 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM396_23000 PF00056 lactate/malate dehydrogenase, NAD binding domain KM396_23005 PF00180 Isocitrate/isopropylmalate dehydrogenase KM396_23010 PF00285 Citrate synthase, C-terminal domain KM396_23015 PF04284 Protein of unknown function (DUF441) KM396_23020 PF01594 AI-2E family transporter KM396_23025 PF04186 FxsA cytoplasmic membrane protein KM396_23030 PF00391 PEP-utilising enzyme, mobile domain KM396_23030 PF00224 Pyruvate kinase, barrel domain KM396_23030 PF02887 Pyruvate kinase, alpha/beta domain KM396_23035 PF00365 Phosphofructokinase KM396_23040 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KM396_23045 PF01039 Carboxyl transferase domain KM396_23045 PF17848 Acetyl-coA carboxylase zinc finger domain KM396_23050 PF00392 Bacterial regulatory proteins, gntR family KM396_23055 PF03949 Malic enzyme, NAD binding domain KM396_23055 PF00390 Malic enzyme, N-terminal domain KM396_23060 PF02811 PHP domain KM396_23060 PF14579 Helix-hairpin-helix motif KM396_23060 PF01336 OB-fold nucleic acid binding domain KM396_23060 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM396_23060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM396_23065 PF14034 Sporulation protein YtrH KM396_23075 PF01368 DHH family KM396_23075 PF02272 DHHA1 domain KM396_23080 PF14007 YtpI-like protein KM396_23095 PF00392 Bacterial regulatory proteins, gntR family KM396_23095 PF00571 CBS domain KM396_23095 PF07085 DRTGG domain KM396_23095 PF03061 Thioesterase superfamily KM396_23110 PF01321 Creatinase/Prolidase N-terminal domain KM396_23110 PF00557 Metallopeptidase family M24 KM396_23115 PF11518 Protein of unknown function (DUF3221) KM396_23145 PF12746 GNAT acetyltransferase KM396_23150 PF07883 Cupin domain KM396_23160 PF01381 Helix-turn-helix KM396_23170 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM396_23170 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM396_23180 PF00582 Universal stress protein family KM396_23200 PF14698 Argininosuccinate lyase C-terminal KM396_23200 PF00206 Lyase KM396_23205 PF00764 Arginosuccinate synthase KM396_23220 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM396_23220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM396_23225 PF12787 EcsC protein family KM396_23240 PF00871 Acetokinase family KM396_23245 PF02384 N-6 DNA Methylase KM396_23250 PF08534 Redoxin KM396_23255 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM396_23265 PF01513 ATP-NAD kinase KM396_23270 PF07969 Amidohydrolase family KM396_23280 PF00501 AMP-binding enzyme KM396_23280 PF13193 AMP-binding enzyme C-terminal domain KM396_23285 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM396_23290 PF02568 Thiamine biosynthesis protein (ThiI) KM396_23290 PF02926 THUMP domain KM396_23295 PF00266 Aminotransferase class-V KM396_23300 PF06160 Septation ring formation regulator, EzrA KM396_23305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM396_23305 PF03466 LysR substrate binding domain KM396_23310 PF00892 EamA-like transporter family KM396_23320 PF13185 GAF domain KM396_23325 PF01053 Cys/Met metabolism PLP-dependent enzyme KM396_23330 PF01479 S4 domain KM396_23330 PF00163 Ribosomal protein S4/S9 N-terminal domain KM396_23345 PF01479 S4 domain KM396_23345 PF00579 tRNA synthetases class I (W and Y) KM396_23355 PF08281 Sigma-70, region 4 KM396_23355 PF04542 Sigma-70 region 2 KM396_23365 PF13193 AMP-binding enzyme C-terminal domain KM396_23365 PF00501 AMP-binding enzyme KM396_23370 PF00583 Acetyltransferase (GNAT) family KM396_23375 PF00571 CBS domain KM396_23380 PF00850 Histone deacetylase domain KM396_23390 PF00072 Response regulator receiver domain KM396_23390 PF00486 Transcriptional regulatory protein, C terminal KM396_23395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_23395 PF00512 His Kinase A (phospho-acceptor) domain KM396_23395 PF00672 HAMP domain KM396_23395 PF13426 PAS domain KM396_23400 PF12796 Ankyrin repeats (3 copies) KM396_23405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM396_23410 PF01741 Large-conductance mechanosensitive channel, MscL KM396_23435 PF00356 Bacterial regulatory proteins, lacI family KM396_23440 PF07537 CamS sex pheromone cAM373 precursor KM396_23445 PF11009 Protein of unknown function (DUF2847) KM396_23455 PF02073 Thermophilic metalloprotease (M29) KM396_23475 PF13302 Acetyltransferase (GNAT) domain KM396_23480 PF01225 Mur ligase family, catalytic domain KM396_23480 PF02875 Mur ligase family, glutamate ligase domain KM396_23480 PF08245 Mur ligase middle domain KM396_23490 PF17854 FtsK alpha domain KM396_23490 PF09397 Ftsk gamma domain KM396_23490 PF01580 FtsK/SpoIIIE family KM396_23500 PF14794 Domain of unknown function (DUF4479) KM396_23500 PF01588 Putative tRNA binding domain KM396_23505 PF07285 Protein of unknown function (DUF1444) KM396_23510 PF00085 Thioredoxin KM396_23515 PF01931 Protein of unknown function DUF84 KM396_23520 PF05343 M42 glutamyl aminopeptidase KM396_23530 PF00753 Metallo-beta-lactamase superfamily KM396_23535 PF02390 Putative methyltransferase KM396_23540 PF14165 YtzH-like protein KM396_23545 PF01636 Phosphotransferase enzyme family KM396_23550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM396_23550 PF17999 Pullulanase N1-terminal domain KM396_23550 PF00128 Alpha amylase, catalytic domain KM396_23555 PF02834 LigT like Phosphoesterase KM396_23565 PF08220 DeoR-like helix-turn-helix domain KM396_23570 PF00849 RNA pseudouridylate synthase KM396_23570 PF01479 S4 domain KM396_23575 PF01943 Polysaccharide biosynthesis protein KM396_23575 PF14667 Polysaccharide biosynthesis C-terminal domain KM396_23585 PF07690 Major Facilitator Superfamily KM396_23590 PF01022 Bacterial regulatory protein, arsR family KM396_23595 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KM396_23605 PF10957 Sporulation protein Cse60 KM396_23615 PF02559 CarD-like/TRCF domain KM396_23625 PF06800 Sugar transport protein KM396_23640 PF02391 MoaE protein KM396_23645 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KM396_23650 PF03454 MoeA C-terminal region (domain IV) KM396_23650 PF00994 Probable molybdopterin binding domain KM396_23650 PF03453 MoeA N-terminal region (domain I and II) KM396_23655 PF01967 MoaC family KM396_23660 PF00899 ThiF family KM396_23685 PF00581 Rhodanese-like domain KM396_23695 PF00561 alpha/beta hydrolase fold KM396_23700 PF03323 Bacillus/Clostridium GerA spore germination protein KM396_23705 PF03845 Spore germination protein KM396_23730 PF08264 Anticodon-binding domain of tRNA KM396_23730 PF00133 tRNA synthetases class I (I, L, M and V) KM396_23730 PF13603 Leucyl-tRNA synthetase, Domain 2 KM396_23730 PF09334 tRNA synthetases class I (M) KM396_23735 PF07690 Major Facilitator Superfamily KM396_23740 PF00999 Sodium/hydrogen exchanger family KM396_23745 PF02080 TrkA-C domain KM396_23750 PF00589 Phage integrase family KM396_23760 PF00005 ABC transporter KM396_23765 PF04235 Protein of unknown function (DUF418) KM396_23765 PF07786 Protein of unknown function (DUF1624) KM396_23775 PF10732 Protein of unknown function (DUF2524) KM396_23780 PF04055 Radical SAM superfamily KM396_23780 PF16199 Radical_SAM C-terminal domain KM396_23785 PF06962 Putative rRNA methylase KM396_23790 PF13732 Domain of unknown function (DUF4162) KM396_23790 PF00005 ABC transporter KM396_23800 PF01177 Asp/Glu/Hydantoin racemase KM396_23815 PF10776 Protein of unknown function (DUF2600) KM396_23820 PF12146 Serine aminopeptidase, S33 KM396_23825 PF00132 Bacterial transferase hexapeptide (six repeats) KM396_23830 PF01569 PAP2 superfamily KM396_23835 PF13439 Glycosyltransferase Family 4 KM396_23835 PF00534 Glycosyl transferases group 1 KM396_23840 PF12804 MobA-like NTP transferase domain KM396_23845 PF00994 Probable molybdopterin binding domain KM396_23860 PF02773 S-adenosylmethionine synthetase, C-terminal domain KM396_23860 PF02772 S-adenosylmethionine synthetase, central domain KM396_23860 PF00438 S-adenosylmethionine synthetase, N-terminal domain KM396_23865 PF01293 Phosphoenolpyruvate carboxykinase KM396_23900 PF01784 NIF3 (NGG1p interacting factor 3) KM396_23905 PF13426 PAS domain KM396_23905 PF13188 PAS domain KM396_23905 PF00989 PAS fold KM396_23905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_23905 PF00512 His Kinase A (phospho-acceptor) domain KM396_23910 PF00989 PAS fold KM396_23910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_23910 PF00512 His Kinase A (phospho-acceptor) domain KM396_23910 PF08447 PAS fold KM396_23915 PF08386 TAP-like protein KM396_23915 PF00561 alpha/beta hydrolase fold KM396_23940 PF00005 ABC transporter KM396_23945 PF00528 Binding-protein-dependent transport system inner membrane component KM396_23970 PF00293 NUDIX domain KM396_23990 PF02664 S-Ribosylhomocysteinase (LuxS) KM396_23995 PF01809 Putative membrane protein insertion efficiency factor KM396_24000 PF00484 Carbonic anhydrase KM396_24005 PF01654 Cytochrome bd terminal oxidase subunit I KM396_24010 PF02322 Cytochrome bd terminal oxidase subunit II KM396_24015 PF10676 Spore germination protein gerPA/gerPF KM396_24030 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM396_24030 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM396_24055 PF04012 PspA/IM30 family KM396_24070 PF17910 FeoB cytosolic helical domain KM396_24070 PF07664 Ferrous iron transport protein B C terminus KM396_24070 PF02421 Ferrous iron transport protein B KM396_24070 PF07670 Nucleoside recognition KM396_24080 PF09515 Thiamine transporter protein (Thia_YuaJ) KM396_24085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_24085 PF00512 His Kinase A (phospho-acceptor) domain KM396_24085 PF00672 HAMP domain KM396_24090 PF00072 Response regulator receiver domain KM396_24090 PF00486 Transcriptional regulatory protein, C terminal KM396_24115 PF00156 Phosphoribosyl transferase domain KM396_24120 PF00781 Diacylglycerol kinase catalytic domain KM396_24140 PF00248 Aldo/keto reductase family KM396_24155 PF09335 SNARE associated Golgi protein KM396_24160 PF00398 Ribosomal RNA adenine dimethylase KM396_24165 PF02687 FtsX-like permease family KM396_24170 PF00005 ABC transporter KM396_24175 PF12833 Helix-turn-helix domain KM396_24175 PF06445 GyrI-like small molecule binding domain KM396_24180 PF00072 Response regulator receiver domain KM396_24180 PF00486 Transcriptional regulatory protein, C terminal KM396_24185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_24195 PF02687 FtsX-like permease family KM396_24200 PF00005 ABC transporter KM396_24215 PF02447 GntP family permease KM396_24220 PF00392 Bacterial regulatory proteins, gntR family KM396_24220 PF07702 UTRA domain KM396_24230 PF07071 KDGP aldolase KM396_24235 PF03841 L-seryl-tRNA selenium transferase KM396_24240 PF01979 Amidohydrolase family KM396_24255 PF02557 D-alanyl-D-alanine carboxypeptidase KM396_24260 PF00512 His Kinase A (phospho-acceptor) domain KM396_24260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_24265 PF00486 Transcriptional regulatory protein, C terminal KM396_24265 PF00072 Response regulator receiver domain KM396_24270 PF13378 Enolase C-terminal domain-like KM396_24270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM396_24275 PF00501 AMP-binding enzyme KM396_24275 PF13193 AMP-binding enzyme C-terminal domain KM396_24280 PF00378 Enoyl-CoA hydratase/isomerase KM396_24285 PF00561 alpha/beta hydrolase fold KM396_24290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM396_24290 PF16582 Middle domain of thiamine pyrophosphate KM396_24290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM396_24295 PF00425 chorismate binding enzyme KM396_24300 PF01040 UbiA prenyltransferase family KM396_24305 PF01258 Prokaryotic dksA/traR C4-type zinc finger KM396_24310 PF00313 'Cold-shock' DNA-binding domain KM396_24325 PF00343 Carbohydrate phosphorylase KM396_24330 PF08323 Starch synthase catalytic domain KM396_24330 PF00534 Glycosyl transferases group 1 KM396_24335 PF00483 Nucleotidyl transferase KM396_24340 PF00483 Nucleotidyl transferase KM396_24345 PF02806 Alpha amylase, C-terminal all-beta domain KM396_24345 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM396_24345 PF00128 Alpha amylase, catalytic domain KM396_24360 PF00056 lactate/malate dehydrogenase, NAD binding domain KM396_24360 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM396_24455 PF05697 Bacterial trigger factor protein (TF) KM396_24455 PF05698 Bacterial trigger factor protein (TF) C-terminus KM396_24490 PF02308 MgtC family KM396_24495 PF07885 Ion channel KM396_24495 PF02254 TrkA-N domain KM396_24500 PF08868 YugN-like family KM396_24505 PF00342 Phosphoglucose isomerase KM396_24510 PF04070 Domain of unknown function (DUF378) KM396_24515 PF00575 S1 RNA binding domain KM396_24525 PF01037 Lrp/AsnC ligand binding domain KM396_24530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM396_24530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM396_24535 PF08386 TAP-like protein KM396_24535 PF00561 alpha/beta hydrolase fold KM396_24545 PF00155 Aminotransferase class I and II KM396_24560 PF08810 Kinase associated protein B KM396_24565 PF00929 Exonuclease KM396_24570 PF03600 Citrate transporter KM396_24585 PF03129 Anticodon binding domain KM396_24585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM396_24590 PF03061 Thioesterase superfamily KM396_24600 PF02632 BioY family KM396_24610 PF00483 Nucleotidyl transferase KM396_24615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM396_24615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM396_24615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM396_24615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM396_24620 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM396_24620 PF10372 Bacterial membrane-spanning protein N-terminus KM396_24625 PF02789 Cytosol aminopeptidase family, N-terminal domain KM396_24625 PF00883 Cytosol aminopeptidase family, catalytic domain KM396_24630 PF06725 3D domain KM396_24640 PF00293 NUDIX domain KM396_24640 PF13344 Haloacid dehalogenase-like hydrolase KM396_24645 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_24650 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_24660 PF06445 GyrI-like small molecule binding domain KM396_24675 PF04463 Protein of unknown function (DUF523) KM396_24695 PF01521 Iron-sulphur cluster biosynthesis KM396_24700 PF01678 Diaminopimelate epimerase KM396_24705 PF07293 Protein of unknown function (DUF1450) KM396_24710 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_24720 PF09383 NIL domain KM396_24720 PF00005 ABC transporter KM396_24725 PF03649 Uncharacterised protein family (UPF0014) KM396_24730 PF08274 PhnA Zinc-Ribbon KM396_24730 PF03831 PhnA domain KM396_24765 PF13427 Domain of unknown function (DUF4111) KM396_24765 PF01909 Nucleotidyltransferase domain KM396_24770 PF07315 Protein of unknown function (DUF1462) KM396_24775 PF01106 NifU-like domain KM396_24790 PF04608 Phosphatidylglycerophosphatase A KM396_24800 PF02525 Flavodoxin-like fold KM396_24805 PF13344 Haloacid dehalogenase-like hydrolase KM396_24815 PF01934 Protein of unknown function DUF86 KM396_24820 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM396_24835 PF06265 Protein of unknown function (DUF1027) KM396_24840 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM396_24845 PF13411 MerR HTH family regulatory protein KM396_24845 PF07739 TipAS antibiotic-recognition domain KM396_24850 PF10086 YhfC intramembrane metalloprotease KM396_24870 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KM396_24870 PF04055 Radical SAM superfamily KM396_24875 PF01551 Peptidase family M23 KM396_24885 PF08827 Domain of unknown function (DUF1805) KM396_24890 PF02872 5'-nucleotidase, C-terminal domain KM396_24895 PF03551 Transcriptional regulator PadR-like family KM396_24900 PF04892 VanZ like family KM396_24905 PF01458 Uncharacterized protein family (UPF0051) KM396_24910 PF01592 NifU-like N terminal domain KM396_24915 PF00266 Aminotransferase class-V KM396_24920 PF01458 Uncharacterized protein family (UPF0051) KM396_24925 PF00005 ABC transporter KM396_24930 PF03180 NLPA lipoprotein KM396_24935 PF03180 NLPA lipoprotein KM396_24940 PF00528 Binding-protein-dependent transport system inner membrane component KM396_24945 PF00005 ABC transporter KM396_24945 PF09383 NIL domain KM396_24955 PF00085 Thioredoxin KM396_24960 PF01751 Toprim domain KM396_24965 PF01597 Glycine cleavage H-protein KM396_24970 PF03960 ArsC family KM396_25015 PF00056 lactate/malate dehydrogenase, NAD binding domain KM396_25015 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM396_25035 PF13305 Tetracyclin repressor-like, C-terminal domain KM396_25035 PF00440 Bacterial regulatory proteins, tetR family KM396_25040 PF00753 Metallo-beta-lactamase superfamily KM396_25045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM396_25045 PF02770 Acyl-CoA dehydrogenase, middle domain KM396_25045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM396_25050 PF02803 Thiolase, C-terminal domain KM396_25050 PF00108 Thiolase, N-terminal domain KM396_25055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM396_25055 PF00378 Enoyl-CoA hydratase/isomerase KM396_25055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM396_25060 PF14115 YuzL-like protein KM396_25065 PF07943 Penicillin-binding protein 5, C-terminal domain KM396_25065 PF00768 D-alanyl-D-alanine carboxypeptidase KM396_25070 PF01619 Proline dehydrogenase KM396_25075 PF10835 Protein of unknown function (DUF2573) KM396_25080 PF01910 Thiamine-binding protein KM396_25085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM396_25085 PF02743 Cache domain KM396_25085 PF00672 HAMP domain KM396_25105 PF07690 Major Facilitator Superfamily KM396_25110 PF13520 Amino acid permease KM396_25120 PF02096 60Kd inner membrane protein KM396_25130 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM396_25130 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM396_25165 PF09335 SNARE associated Golgi protein KM396_25175 PF17969 L,D-transpeptidase C-terminal domain KM396_25175 PF03734 L,D-transpeptidase catalytic domain KM396_25180 PF00486 Transcriptional regulatory protein, C terminal KM396_25180 PF00072 Response regulator receiver domain KM396_25185 PF00989 PAS fold KM396_25185 PF00512 His Kinase A (phospho-acceptor) domain KM396_25185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_25185 PF16736 Single Cache-like KM396_25195 PF09334 tRNA synthetases class I (M) KM396_25195 PF08264 Anticodon-binding domain of tRNA KM396_25205 PF02743 Cache domain KM396_25205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM396_25205 PF00672 HAMP domain KM396_25210 PF01883 Iron-sulfur cluster assembly protein KM396_25215 PF07504 Fungalysin/Thermolysin Propeptide Motif KM396_25215 PF03413 Peptidase propeptide and YPEB domain KM396_25215 PF01447 Thermolysin metallopeptidase, catalytic domain KM396_25215 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM396_25220 PF02678 Pirin KM396_25220 PF17954 Quercetinase C-terminal cupin domain KM396_25225 PF01047 MarR family KM396_25235 PF00999 Sodium/hydrogen exchanger family KM396_25240 PF02080 TrkA-C domain KM396_25245 PF01235 Sodium:alanine symporter family KM396_25250 PF00210 Ferritin-like domain KM396_25265 PF03641 Possible lysine decarboxylase KM396_25275 PF00210 Ferritin-like domain KM396_25285 PF01773 Na+ dependent nucleoside transporter N-terminus KM396_25285 PF07662 Na+ dependent nucleoside transporter C-terminus KM396_25290 PF01773 Na+ dependent nucleoside transporter N-terminus KM396_25290 PF07662 Na+ dependent nucleoside transporter C-terminus KM396_25295 PF01235 Sodium:alanine symporter family KM396_25300 PF01235 Sodium:alanine symporter family KM396_25305 PF13460 NAD(P)H-binding KM396_25320 PF00248 Aldo/keto reductase family KM396_25325 PF07690 Major Facilitator Superfamily KM396_25330 PF01638 HxlR-like helix-turn-helix KM396_25335 PF07849 Protein of unknown function (DUF1641) KM396_25340 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_25345 PF01479 S4 domain KM396_25345 PF00579 tRNA synthetases class I (W and Y) KM396_25350 PF01565 FAD binding domain KM396_25350 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM396_25360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM396_25360 PF17202 Single cache domain 3 KM396_25360 PF00672 HAMP domain KM396_25370 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM396_25375 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM396_25390 PF13302 Acetyltransferase (GNAT) domain KM396_25395 PF06146 Phosphate-starvation-inducible E KM396_25410 PF00005 ABC transporter KM396_25415 PF01032 FecCD transport family KM396_25420 PF01032 FecCD transport family KM396_25430 PF00072 Response regulator receiver domain KM396_25430 PF00486 Transcriptional regulatory protein, C terminal KM396_25440 PF01668 SmpB protein KM396_25445 PF00575 S1 RNA binding domain KM396_25445 PF08206 Ribonuclease B OB domain KM396_25445 PF17876 Cold shock domain KM396_25445 PF00773 RNB domain KM396_25450 PF12146 Serine aminopeptidase, S33 KM396_25455 PF03840 Preprotein translocase SecG subunit KM396_25460 PF04172 LrgB-like family KM396_25465 PF03788 LrgA family KM396_25470 PF01156 Inosine-uridine preferring nucleoside hydrolase KM396_25560 PF04860 Phage portal protein KM396_25585 PF00589 Phage integrase family KM396_25585 PF02899 Phage integrase, N-terminal SAM-like domain KM396_25590 PF00113 Enolase, C-terminal TIM barrel domain KM396_25590 PF03952 Enolase, N-terminal domain KM396_25595 PF01676 Metalloenzyme superfamily KM396_25595 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KM396_25600 PF00121 Triosephosphate isomerase KM396_25605 PF00162 Phosphoglycerate kinase KM396_25610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM396_25610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM396_25615 PF04198 Putative sugar-binding domain KM396_25625 PF00309 Sigma-54 factor, Activator interacting domain (AID) KM396_25625 PF04963 Sigma-54 factor, core binding domain KM396_25625 PF04552 Sigma-54, DNA binding domain KM396_25645 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM396_25650 PF07451 Stage V sporulation protein AD (SpoVAD) KM396_25655 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM396_25665 PF04239 Protein of unknown function (DUF421) KM396_25670 PF00574 Clp protease KM396_25675 PF00381 PTS HPr component phosphorylation site KM396_25680 PF02650 WhiA C-terminal HTH domain KM396_25680 PF14527 WhiA LAGLIDADG-like domain KM396_25680 PF10298 WhiA N-terminal LAGLIDADG-like domain KM396_25685 PF01933 Uncharacterised protein family UPF0052 KM396_25690 PF03668 P-loop ATPase protein family KM396_25695 PF00293 NUDIX domain KM396_25705 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM396_25715 PF14602 Hexapeptide repeat of succinyl-transferase KM396_25720 PF13419 Haloacid dehalogenase-like hydrolase KM396_25725 PF01790 Prolipoprotein diacylglyceryl transferase KM396_25730 PF07475 HPr Serine kinase C-terminal domain KM396_25730 PF02603 HPr Serine kinase N terminus KM396_25735 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KM396_25745 PF00005 ABC transporter KM396_25745 PF17755 UvrA DNA-binding domain KM396_25745 PF17760 UvrA interaction domain KM396_25750 PF12344 Ultra-violet resistance protein B KM396_25750 PF17757 UvrB interaction domain KM396_25750 PF02151 UvrB/uvrC motif KM396_25750 PF00271 Helicase conserved C-terminal domain KM396_25750 PF04851 Type III restriction enzyme, res subunit KM396_25755 PF01385 Probable transposase KM396_25755 PF07282 Putative transposase DNA-binding domain KM396_25755 PF12323 Helix-turn-helix domain KM396_25770 PF07739 TipAS antibiotic-recognition domain KM396_25770 PF13411 MerR HTH family regulatory protein KM396_25795 PF03601 Conserved hypothetical protein 698 KM396_25800 PF03466 LysR substrate binding domain KM396_25800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM396_25805 PF13411 MerR HTH family regulatory protein KM396_25810 PF03358 NADPH-dependent FMN reductase KM396_25815 PF12848 ABC transporter KM396_25815 PF00005 ABC transporter KM396_25825 PF00005 ABC transporter KM396_25825 PF00664 ABC transporter transmembrane region KM396_25830 PF17820 PDZ domain KM396_25835 PF03572 Peptidase family S41 KM396_25835 PF17820 PDZ domain KM396_25835 PF01471 Putative peptidoglycan binding domain KM396_25840 PF18075 FtsX extracellular domain KM396_25840 PF02687 FtsX-like permease family KM396_25845 PF00005 ABC transporter KM396_25850 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM396_25860 PF02810 SEC-C motif KM396_25860 PF07517 SecA DEAD-like domain KM396_25860 PF01043 SecA preprotein cross-linking domain KM396_25860 PF07516 SecA Wing and Scaffold domain KM396_25865 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KM396_25865 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KM396_25870 PF00313 'Cold-shock' DNA-binding domain KM396_25880 PF00271 Helicase conserved C-terminal domain KM396_25880 PF04851 Type III restriction enzyme, res subunit KM396_25885 PF01476 LysM domain KM396_25885 PF00877 NlpC/P60 family KM396_25890 PF01638 HxlR-like helix-turn-helix KM396_25895 PF02645 Uncharacterised protein, DegV family COG1307 KM396_25900 PF09186 Domain of unknown function (DUF1949) KM396_25900 PF01205 Uncharacterized protein family UPF0029 KM396_25905 PF03816 Cell envelope-related transcriptional attenuator domain KM396_25910 PF02350 UDP-N-acetylglucosamine 2-epimerase KM396_25915 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM396_25915 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM396_25915 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM396_25920 PF00953 Glycosyl transferase family 4 KM396_25925 PF01522 Polysaccharide deacetylase KM396_25930 PF03610 PTS system fructose IIA component KM396_25930 PF00874 PRD domain KM396_25930 PF00158 Sigma-54 interaction domain KM396_25940 PF02417 Chromate transporter KM396_25945 PF04794 YdjC-like protein KM396_25950 PF02056 Family 4 glycosyl hydrolase KM396_25950 PF11975 Family 4 glycosyl hydrolase C-terminal domain KM396_25955 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM396_25960 PF02378 Phosphotransferase system, EIIC KM396_25965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM396_25975 PF02675 S-adenosylmethionine decarboxylase KM396_25980 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM396_25985 PF02378 Phosphotransferase system, EIIC KM396_25990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM396_25995 PF00375 Sodium:dicarboxylate symporter family KM396_26005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM396_26015 PF03466 LysR substrate binding domain KM396_26015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM396_26035 PF01654 Cytochrome bd terminal oxidase subunit I KM396_26040 PF02322 Cytochrome bd terminal oxidase subunit II KM396_26045 PF02040 Arsenical pump membrane protein KM396_26050 PF01964 Radical SAM ThiC family KM396_26050 PF13667 ThiC-associated domain KM396_26055 PF02652 L-lactate permease KM396_26065 PF09988 Uncharacterized metal-binding protein (DUF2227) KM396_26075 PF00884 Sulfatase KM396_26080 PF01063 Amino-transferase class IV KM396_26090 PF01773 Na+ dependent nucleoside transporter N-terminus KM396_26090 PF07662 Na+ dependent nucleoside transporter C-terminus KM396_26105 PF02028 BCCT, betaine/carnitine/choline family transporter KM396_26110 PF01476 LysM domain KM396_26110 PF06725 3D domain KM396_26135 PF04434 SWIM zinc finger KM396_26140 PF00176 SNF2 family N-terminal domain KM396_26140 PF00271 Helicase conserved C-terminal domain KM396_26140 PF12419 SNF2 Helicase protein KM396_26170 PF04545 Sigma-70, region 4 KM396_26170 PF04542 Sigma-70 region 2 KM396_26175 PF04893 Yip1 domain KM396_26180 PF02687 FtsX-like permease family KM396_26180 PF12704 MacB-like periplasmic core domain KM396_26185 PF00005 ABC transporter KM396_26205 PF07690 Major Facilitator Superfamily KM396_26220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_26220 PF00989 PAS fold KM396_26220 PF16736 Single Cache-like KM396_26220 PF00512 His Kinase A (phospho-acceptor) domain KM396_26225 PF00072 Response regulator receiver domain KM396_26225 PF00486 Transcriptional regulatory protein, C terminal KM396_26230 PF16363 GDP-mannose 4,6 dehydratase KM396_26235 PF03816 Cell envelope-related transcriptional attenuator domain KM396_26240 PF07977 FabA-like domain KM396_26245 PF02350 UDP-N-acetylglucosamine 2-epimerase KM396_26255 PF01061 ABC-2 type transporter KM396_26260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM396_26260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM396_26260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM396_26305 PF12116 Stage III sporulation protein D KM396_26320 PF01551 Peptidase family M23 KM396_26330 PF00005 ABC transporter KM396_26340 PF08486 Stage II sporulation protein KM396_26345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM396_26355 PF06612 Protein of unknown function (DUF1146) KM396_26360 PF00361 Proton-conducting membrane transporter KM396_26365 PF00361 Proton-conducting membrane transporter KM396_26370 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus KM396_26370 PF00361 Proton-conducting membrane transporter KM396_26370 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM396_26375 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KM396_26380 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KM396_26390 PF00146 NADH dehydrogenase KM396_26395 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KM396_26400 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KM396_26405 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KM396_26410 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KM396_26415 PF00563 EAL domain KM396_26415 PF00990 Diguanylate cyclase, GGDEF domain KM396_26415 PF03707 Bacterial signalling protein N terminal repeat KM396_26430 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KM396_26430 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KM396_26435 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM396_26435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM396_26440 PF00231 ATP synthase KM396_26445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM396_26445 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM396_26445 PF00306 ATP synthase alpha/beta chain, C terminal domain KM396_26450 PF00213 ATP synthase delta (OSCP) subunit KM396_26455 PF00430 ATP synthase B/B' CF(0) KM396_26460 PF00137 ATP synthase subunit C KM396_26465 PF00119 ATP synthase A chain KM396_26470 PF03899 ATP synthase I chain KM396_26490 PF00464 Serine hydroxymethyltransferase KM396_26495 PF04260 Protein of unknown function (DUF436) KM396_26500 PF02502 Ribose/Galactose Isomerase KM396_26505 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM396_26510 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM396_26515 PF07681 DoxX KM396_26520 PF01613 Flavin reductase like domain KM396_26530 PF02659 Putative manganese efflux pump KM396_26535 PF03481 Putative GTP-binding controlling metal-binding KM396_26535 PF01300 Telomere recombination KM396_26545 PF09551 Stage II sporulation protein R (spore_II_R) KM396_26550 PF17827 PrmC N-terminal domain KM396_26550 PF13847 Methyltransferase domain KM396_26555 PF03462 PCRF domain KM396_26555 PF00472 RF-1 domain KM396_26560 PF00265 Thymidine kinase KM396_26565 PF01197 Ribosomal protein L31 KM396_26570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM396_26570 PF07498 Rho termination factor, N-terminal domain KM396_26570 PF07497 Rho termination factor, RNA-binding domain KM396_26575 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM396_26580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM396_26585 PF01116 Fructose-bisphosphate aldolase class-II KM396_26590 PF00072 Response regulator receiver domain KM396_26595 PF10740 Domain of unknown function (DUF2529) KM396_26600 PF00117 Glutamine amidotransferase class-I KM396_26600 PF06418 CTP synthase N-terminus KM396_26605 PF05066 HB1, ASXL, restriction endonuclease HTH domain KM396_26615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM396_26615 PF02770 Acyl-CoA dehydrogenase, middle domain KM396_26615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM396_26620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM396_26620 PF02770 Acyl-CoA dehydrogenase, middle domain KM396_26620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM396_26625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM396_26625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM396_26630 PF02803 Thiolase, C-terminal domain KM396_26630 PF00108 Thiolase, N-terminal domain KM396_26635 PF02754 Cysteine-rich domain KM396_26635 PF13183 4Fe-4S dicluster domain KM396_26640 PF13091 PLD-like domain KM396_26645 PF03851 UV-endonuclease UvdE KM396_26650 PF00990 Diguanylate cyclase, GGDEF domain KM396_26650 PF00563 EAL domain KM396_26650 PF03707 Bacterial signalling protein N terminal repeat KM396_26670 PF00072 Response regulator receiver domain KM396_26670 PF00196 Bacterial regulatory proteins, luxR family KM396_26675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_26675 PF07730 Histidine kinase KM396_26685 PF00005 ABC transporter KM396_26690 PF00557 Metallopeptidase family M24 KM396_26700 PF02225 PA domain KM396_26700 PF04389 Peptidase family M28 KM396_26720 PF04542 Sigma-70 region 2 KM396_26720 PF08281 Sigma-70, region 4 KM396_26725 PF03485 Arginyl tRNA synthetase N terminal domain KM396_26725 PF05746 DALR anticodon binding domain KM396_26725 PF00750 tRNA synthetases class I (R) KM396_26730 PF09148 Domain of unknown function (DUF1934) KM396_26735 PF02016 LD-carboxypeptidase N-terminal domain KM396_26735 PF17676 LD-carboxypeptidase C-terminal domain KM396_26750 PF00491 Arginase family KM396_26755 PF17284 Spermidine synthase tetramerisation domain KM396_26760 PF07690 Major Facilitator Superfamily KM396_26765 PF13411 MerR HTH family regulatory protein KM396_26770 PF03009 Glycerophosphoryl diester phosphodiesterase family KM396_26775 PF00912 Transglycosylase KM396_26775 PF00905 Penicillin binding protein transpeptidase domain KM396_26780 PF08741 YwhD family KM396_26785 PF02163 Peptidase family M50 KM396_26790 PF01361 Tautomerase enzyme KM396_26795 PF01966 HD domain KM396_26800 PF01497 Periplasmic binding protein KM396_26805 PF00005 ABC transporter KM396_26810 PF01032 FecCD transport family KM396_26820 PF07293 Protein of unknown function (DUF1450) KM396_26835 PF03099 Biotin/lipoate A/B protein ligase family KM396_26840 PF01515 Phosphate acetyl/butaryl transferase KM396_26845 PF06778 Chlorite dismutase KM396_26850 PF00768 D-alanyl-D-alanine carboxypeptidase KM396_26850 PF07943 Penicillin-binding protein 5, C-terminal domain KM396_26855 PF07486 Cell Wall Hydrolase KM396_26860 PF09671 Spore coat protein (Spore_GerQ) KM396_26865 PF04241 Protein of unknown function (DUF423) KM396_26875 PF07885 Ion channel KM396_26875 PF02254 TrkA-N domain KM396_26880 PF00860 Permease family KM396_26890 PF12823 Domain of unknown function (DUF3817) KM396_26895 PF03167 Uracil DNA glycosylase superfamily KM396_26900 PF12679 ABC-2 family transporter protein KM396_26905 PF00005 ABC transporter KM396_26910 PF13472 GDSL-like Lipase/Acylhydrolase family KM396_26915 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM396_26915 PF00356 Bacterial regulatory proteins, lacI family KM396_26925 PF01842 ACT domain KM396_26925 PF03447 Homoserine dehydrogenase, NAD binding domain KM396_26925 PF00742 Homoserine dehydrogenase KM396_26930 PF04204 Homoserine O-succinyltransferase KM396_26935 PF01053 Cys/Met metabolism PLP-dependent enzyme KM396_26945 PF13419 Haloacid dehalogenase-like hydrolase KM396_26950 PF00027 Cyclic nucleotide-binding domain KM396_26955 PF02525 Flavodoxin-like fold KM396_26960 PF00196 Bacterial regulatory proteins, luxR family KM396_26960 PF00072 Response regulator receiver domain KM396_26970 PF08543 Phosphomethylpyrimidine kinase KM396_26975 PF00990 Diguanylate cyclase, GGDEF domain KM396_26975 PF07694 5TMR of 5TMR-LYT KM396_26980 PF04328 Selenoprotein, putative KM396_26985 PF02554 Carbon starvation protein CstA KM396_26985 PF13722 5TM C-terminal transporter carbon starvation CstA KM396_26990 PF04397 LytTr DNA-binding domain KM396_26990 PF00072 Response regulator receiver domain KM396_26995 PF07690 Major Facilitator Superfamily KM396_27000 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM396_27015 PF03458 UPF0126 domain KM396_27020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM396_27030 PF03061 Thioesterase superfamily KM396_27040 PF00535 Glycosyl transferase family 2 KM396_27045 PF12848 ABC transporter KM396_27045 PF00005 ABC transporter KM396_27065 PF00535 Glycosyl transferase family 2 KM396_27070 PF00440 Bacterial regulatory proteins, tetR family KM396_27075 PF00873 AcrB/AcrD/AcrF family KM396_27080 PF01625 Peptide methionine sulfoxide reductase KM396_27080 PF01641 SelR domain KM396_27085 PF01594 AI-2E family transporter KM396_27090 PF04172 LrgB-like family KM396_27095 PF03788 LrgA family KM396_27100 PF04397 LytTr DNA-binding domain KM396_27100 PF00072 Response regulator receiver domain KM396_27105 PF07694 5TMR of 5TMR-LYT KM396_27105 PF06580 Histidine kinase KM396_27105 PF13492 GAF domain KM396_27105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_27110 PF07690 Major Facilitator Superfamily KM396_27115 PF02028 BCCT, betaine/carnitine/choline family transporter KM396_27120 PF02898 Nitric oxide synthase, oxygenase domain KM396_27125 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM396_27125 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM396_27135 PF02293 AmiS/UreI family transporter KM396_27145 PF16363 GDP-mannose 4,6 dehydratase KM396_27150 PF03006 Haemolysin-III related KM396_27160 PF03880 DbpA RNA binding domain KM396_27160 PF00271 Helicase conserved C-terminal domain KM396_27160 PF00270 DEAD/DEAH box helicase KM396_27170 PF00478 IMP dehydrogenase / GMP reductase domain KM396_27175 PF08439 Oligopeptidase F KM396_27175 PF01432 Peptidase family M3 KM396_27185 PF02590 Predicted SPOUT methyltransferase KM396_27195 PF13180 PDZ domain KM396_27200 PF00753 Metallo-beta-lactamase superfamily KM396_27205 PF09648 YycH protein KM396_27210 PF07435 YycH protein KM396_27215 PF13426 PAS domain KM396_27215 PF00512 His Kinase A (phospho-acceptor) domain KM396_27215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM396_27215 PF00672 HAMP domain KM396_27220 PF00072 Response regulator receiver domain KM396_27220 PF00486 Transcriptional regulatory protein, C terminal KM396_27245 PF00709 Adenylosuccinate synthetase KM396_27250 PF03796 DnaB-like helicase C terminal domain KM396_27250 PF00772 DnaB-like helicase N terminal domain KM396_27255 PF03948 Ribosomal protein L9, C-terminal domain KM396_27255 PF01281 Ribosomal protein L9, N-terminal domain KM396_27260 PF01368 DHH family KM396_27260 PF02272 DHHA1 domain KM396_27265 PF09991 Predicted membrane protein (DUF2232) KM396_27270 PF01084 Ribosomal protein S18 KM396_27275 PF00436 Single-strand binding protein family KM396_27280 PF01250 Ribosomal protein S6 KM396_27285 PF01926 50S ribosome-binding GTPase KM396_27285 PF06071 Protein of unknown function (DUF933) KM396_27290 PF06107 Bacterial protein of unknown function (DUF951) KM396_27295 PF00924 Mechanosensitive ion channel KM396_27300 PF06866 Protein of unknown function (DUF1256) KM396_27305 PF17762 HTH domain found in ParB protein KM396_27305 PF02195 ParB-like nuclease domain KM396_27310 PF13614 AAA domain KM396_27315 PF17762 HTH domain found in ParB protein KM396_27315 PF02195 ParB-like nuclease domain KM396_27320 PF02527 rRNA small subunit methyltransferase G KM396_27325 PF01134 Glucose inhibited division protein A KM396_27325 PF13932 GidA associated domain KM396_27330 PF10396 GTP-binding protein TrmE N-terminus KM396_27330 PF12631 MnmE helical domain KM396_27330 PF01926 50S ribosome-binding GTPase KM396_27335 PF14804 Jag N-terminus KM396_27335 PF01424 R3H domain KM396_27340 PF02096 60Kd inner membrane protein KM396_27345 PF00825 Ribonuclease P KM396_27350 PF00468 Ribosomal protein L34 KM396_27360 PF08378 Nuclease-related domain KM396_27400 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM396_27480 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM396_27525 PF13427 Domain of unknown function (DUF4111) KM396_27525 PF18765 Polymerase beta, Nucleotidyltransferase KM396_27550 PF01609 Transposase DDE domain KM396_27555 PF01609 Transposase DDE domain KM396_27580 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KM396_27580 PF17854 FtsK alpha domain KM396_27580 PF09397 Ftsk gamma domain KM396_27580 PF01580 FtsK/SpoIIIE family KM396_27595 PF00091 Tubulin/FtsZ family, GTPase domain KM396_27670 PF00437 Type II/IV secretion system protein KM396_27790 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) KM396_27805 PF04235 Protein of unknown function (DUF418) KM396_27825 PF00395 S-layer homology domain KM396_27830 PF01569 PAP2 superfamily KM396_27845 PF00535 Glycosyl transferase family 2 KM396_27850 PF00483 Nucleotidyl transferase KM396_27895 PF03497 Anthrax toxin LF subunit KM396_27895 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM396_27915 PF08279 HTH domain KM396_27915 PF05043 Mga helix-turn-helix domain KM396_27915 PF00874 PRD domain KM396_27920 PF09385 Histidine kinase N terminal KM396_27935 PF01526 Tn3 transposase DDE domain KM396_27935 PF13700 Domain of unknown function (DUF4158) KM396_27940 PF00239 Resolvase, N terminal domain KM396_27940 PF02796 Helix-turn-helix domain of resolvase KM396_27945 PF03845 Spore germination protein KM396_27950 PF03323 Bacillus/Clostridium GerA spore germination protein KM396_27955 PF05504 Spore germination B3/ GerAC like, C-terminal KM396_27965 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 KM396_27965 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 KM396_27965 PF07691 PA14 domain KM396_27965 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain KM396_27970 PF01022 Bacterial regulatory protein, arsR family KM396_27995 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM396_27995 PF09156 Anthrax toxin lethal factor, middle domain KM396_28015 PF18277 AbrB C-terminal domain KM396_28015 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM396_28025 PF00589 Phage integrase family KM396_28025 PF02899 Phage integrase, N-terminal SAM-like domain KM396_28055 PF14436 Bacterial EndoU nuclease KM396_28055 PF04740 LXG domain of WXG superfamily KM396_28080 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM396_28090 PF00589 Phage integrase family KM396_28115 PF18801 response regulator aspartate phosphatase H, N terminal KM396_28125 PF17209 Hfq protein KM396_28130 PF01022 Bacterial regulatory protein, arsR family KM396_28135 PF02600 Disulfide bond formation protein DsbB KM396_28150 PF00565 Staphylococcal nuclease homologue KM396_28155 PF13342 C-terminal repeat of topoisomerase KM396_28155 PF01131 DNA topoisomerase KM396_28155 PF01751 Toprim domain KM396_28165 PF08708 Primase C terminal 1 (PriCT-1) KM396_28185 PF17362 Family of unknown function KM396_28200 PF17631 Family of unknown function (DUF5512) KM396_28240 PF00437 Type II/IV secretion system protein KM396_28270 PF04956 TrbC/VIRB2 family KM396_28285 PF12696 TraM recognition site of TraD and TraG KM396_28320 PF00877 NlpC/P60 family KM396_28330 PF17632 Family of unknown function (DUF5513) KM396_28355 PF17633 Family of unknown function (DUF5514) KM396_28360 PF17630 Family of unknown function (DUF5511) KM396_28365 PF18840 Large polyvalent protein associated domain 25 KM396_28380 PF13154 Protein of unknown function (DUF3991) KM396_28385 PF01131 DNA topoisomerase KM396_28385 PF01751 Toprim domain KM396_28425 PF17443 Uncharacterized protein pXO2-72 KM396_28445 PF11798 IMS family HHH motif KM396_28445 PF00817 impB/mucB/samB family KM396_28445 PF11799 impB/mucB/samB family C-terminal domain KM396_28450 PF13152 Protein of unknown function (DUF3967) KM396_28450 PF13411 MerR HTH family regulatory protein KM396_28455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM396_28485 PF00874 PRD domain KM396_28485 PF05043 Mga helix-turn-helix domain KM396_28485 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM396_28495 PF01810 LysE type translocator KM396_28505 PF08279 HTH domain KM396_28505 PF00874 PRD domain KM396_28505 PF05043 Mga helix-turn-helix domain KM396_28510 PF09385 Histidine kinase N terminal KM396_28520 PF10502 Signal peptidase, peptidase S26 KM396_28535 PF01022 Bacterial regulatory protein, arsR family KM396_28545 PF08245 Mur ligase middle domain KM396_28550 PF14102 Capsule biosynthesis CapC KM396_28555 PF09587 Bacterial capsule synthesis protein PGA_cap KM396_28575 PF05043 Mga helix-turn-helix domain KM396_28575 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM396_28585 PF01569 PAP2 superfamily KM396_28595 PF00440 Bacterial regulatory proteins, tetR family KM396_28600 PF04463 Protein of unknown function (DUF523) KM396_28605 PF02517 CPBP intramembrane metalloprotease KM396_28610 PF01906 Putative heavy-metal-binding KM396_28625 PF01520 N-acetylmuramoyl-L-alanine amidase KM396_28625 PF00395 S-layer homology domain KM396_28640 PF13614 AAA domain