locus-tag class description DJ48_1 PF02779 Transketolase, pyrimidine binding domain DJ48_1 PF02780 Transketolase, C-terminal domain DJ48_1 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DJ48_100 PF00209 Sodium:neurotransmitter symporter family DJ48_1000 PF12679 ABC-2 family transporter protein DJ48_1003 PF07690 Major Facilitator Superfamily DJ48_1004 PF01047 MarR family DJ48_1005 PF12697 Alpha/beta hydrolase family DJ48_1006 PF07690 Major Facilitator Superfamily DJ48_1007 PF14044 NETI protein DJ48_1013 PF01510 N-acetylmuramoyl-L-alanine amidase DJ48_1013 PF01476 LysM domain DJ48_1013 PF01471 Putative peptidoglycan binding domain DJ48_1015 PF01804 Penicillin amidase DJ48_1016 PF12833 Helix-turn-helix domain DJ48_1016 PF01497 Periplasmic binding protein DJ48_1017 PF07883 Cupin domain DJ48_102 PF12164 Stage V sporulation protein AA DJ48_1020 PF08281 Sigma-70, region 4 DJ48_1020 PF04542 Sigma-70 region 2 DJ48_1023 PF00266 Aminotransferase class-V DJ48_1024 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ48_1024 PF01842 ACT domain DJ48_1024 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ48_1027 PF13520 Amino acid permease DJ48_1028 PF01037 Lrp/AsnC ligand binding domain DJ48_1029 PF00857 Isochorismatase family DJ48_103 PF13782 Stage V sporulation protein AB DJ48_1030 PF02769 AIR synthase related protein, C-terminal domain DJ48_1030 PF00586 AIR synthase related protein, N-terminal domain DJ48_1031 PF00708 Acylphosphatase DJ48_1031 PF01300 Telomere recombination DJ48_1031 PF07503 HypF finger DJ48_1031 PF17788 HypF Kae1-like domain DJ48_1032 PF00202 Aminotransferase class-III DJ48_1033 PF03315 Serine dehydratase beta chain DJ48_1033 PF01842 ACT domain DJ48_1034 PF03313 Serine dehydratase alpha chain DJ48_1036 PF01022 Bacterial regulatory protein, arsR family DJ48_1038 PF16859 Tetracyclin repressor-like, C-terminal domain DJ48_1038 PF00440 Bacterial regulatory proteins, tetR family DJ48_1039 PF07690 Major Facilitator Superfamily DJ48_104 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DJ48_1040 PF02661 Fic/DOC family DJ48_1041 PF01609 Transposase DDE domain DJ48_1042 PF08453 Peptidase family M9 N-terminal DJ48_1042 PF01752 Collagenase DJ48_1042 PF18496 Collagenase G catalytic helper subdomain DJ48_1043 PF01554 MatE DJ48_1047 PF02743 Cache domain DJ48_1047 PF00672 HAMP domain DJ48_1047 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ48_105 PF07451 Stage V sporulation protein AD (SpoVAD) DJ48_1050 PF11798 IMS family HHH motif DJ48_1050 PF11799 impB/mucB/samB family C-terminal domain DJ48_1050 PF00817 impB/mucB/samB family DJ48_1054 PF18801 response regulator aspartate phosphatase H, N terminal DJ48_1055 PF00356 Bacterial regulatory proteins, lacI family DJ48_1056 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DJ48_1057 PF05116 Sucrose-6F-phosphate phosphohydrolase DJ48_1058 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJ48_1058 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ48_1059 PF07690 Major Facilitator Superfamily DJ48_106 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DJ48_1063 PF02016 LD-carboxypeptidase N-terminal domain DJ48_1063 PF17676 LD-carboxypeptidase C-terminal domain DJ48_1065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ48_1065 PF03466 LysR substrate binding domain DJ48_1066 PF02754 Cysteine-rich domain DJ48_1067 PF02589 LUD domain DJ48_1067 PF13183 4Fe-4S dicluster domain DJ48_1067 PF11870 Domain of unknown function (DUF3390) DJ48_1068 PF02589 LUD domain DJ48_1069 PF07690 Major Facilitator Superfamily DJ48_107 PF14097 Stage V sporulation protein AE1 DJ48_1070 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ48_1070 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ48_1071 PF04299 Putative FMN-binding domain DJ48_1072 PF00583 Acetyltransferase (GNAT) family DJ48_1073 PF01047 MarR family DJ48_1075 PF00072 Response regulator receiver domain DJ48_1075 PF00486 Transcriptional regulatory protein, C terminal DJ48_1076 PF00512 His Kinase A (phospho-acceptor) domain DJ48_1076 PF00672 HAMP domain DJ48_1076 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_1079 PF02687 FtsX-like permease family DJ48_108 PF03323 Bacillus/Clostridium GerA spore germination protein DJ48_1080 PF00005 ABC transporter DJ48_1083 PF04072 Leucine carboxyl methyltransferase DJ48_1084 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJ48_1084 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJ48_1086 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DJ48_1087 PF00753 Metallo-beta-lactamase superfamily DJ48_1090 PF01381 Helix-turn-helix DJ48_1092 PF00144 Beta-lactamase DJ48_1095 PF00291 Pyridoxal-phosphate dependent enzyme DJ48_11 PF00158 Sigma-54 interaction domain DJ48_11 PF00989 PAS fold DJ48_11 PF02954 Bacterial regulatory protein, Fis family DJ48_110 PF06207 Protein of unknown function (DUF1002) DJ48_1100 PF00512 His Kinase A (phospho-acceptor) domain DJ48_1100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_1100 PF00672 HAMP domain DJ48_1101 PF00072 Response regulator receiver domain DJ48_1101 PF00486 Transcriptional regulatory protein, C terminal DJ48_1106 PF07690 Major Facilitator Superfamily DJ48_1107 PF00067 Cytochrome P450 DJ48_1107 PF00175 Oxidoreductase NAD-binding domain DJ48_1107 PF00667 FAD binding domain DJ48_1107 PF00258 Flavodoxin DJ48_1108 PF12802 MarR family DJ48_111 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DJ48_1111 PF00144 Beta-lactamase DJ48_1113 PF02805 Metal binding domain of Ada DJ48_1113 PF12833 Helix-turn-helix domain DJ48_1115 PF01609 Transposase DDE domain DJ48_1117 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_112 PF00583 Acetyltransferase (GNAT) family DJ48_1120 PF01037 Lrp/AsnC ligand binding domain DJ48_1123 PF00012 Hsp70 protein DJ48_1127 PF01022 Bacterial regulatory protein, arsR family DJ48_1128 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_1129 PF01758 Sodium Bile acid symporter family DJ48_113 PF03745 Domain of unknown function (DUF309) DJ48_1130 PF01451 Low molecular weight phosphotyrosine protein phosphatase DJ48_1135 PF00005 ABC transporter DJ48_1136 PF00950 ABC 3 transport family DJ48_1137 PF01297 Zinc-uptake complex component A periplasmic DJ48_1138 PF00561 alpha/beta hydrolase fold DJ48_1139 PF01040 UbiA prenyltransferase family DJ48_1141 PF10057 Uncharacterized conserved protein (DUF2294) DJ48_1142 PF00361 Proton-conducting membrane transporter DJ48_1142 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DJ48_1143 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) DJ48_1145 PF00875 DNA photolyase DJ48_1145 PF03441 FAD binding domain of DNA photolyase DJ48_1146 PF03073 TspO/MBR family DJ48_1149 PF11181 Heat induced stress protein YflT DJ48_115 PF02616 Segregation and condensation protein ScpA DJ48_1152 PF01544 CorA-like Mg2+ transporter protein DJ48_1153 PF01047 MarR family DJ48_1154 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ48_1154 PF03466 LysR substrate binding domain DJ48_1155 PF01979 Amidohydrolase family DJ48_1158 PF00857 Isochorismatase family DJ48_1159 PF00561 alpha/beta hydrolase fold DJ48_116 PF04079 Segregation and condensation complex subunit ScpB DJ48_1160 PF06628 Catalase-related immune-responsive DJ48_1160 PF00199 Catalase DJ48_1161 PF00149 Calcineurin-like phosphoesterase DJ48_1161 PF17936 Bacterial Ig domain DJ48_1161 PF02872 5'-nucleotidase, C-terminal domain DJ48_1167 PF01235 Sodium:alanine symporter family DJ48_1169 PF04960 Glutaminase DJ48_1170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_1171 PF08664 YcbB domain DJ48_1171 PF00072 Response regulator receiver domain DJ48_1172 PF03323 Bacillus/Clostridium GerA spore germination protein DJ48_1173 PF03845 Spore germination protein DJ48_1174 PF05504 Spore germination B3/ GerAC like, C-terminal DJ48_1176 PF03949 Malic enzyme, NAD binding domain DJ48_1176 PF00390 Malic enzyme, N-terminal domain DJ48_1177 PF13564 DoxX-like family DJ48_1178 PF03807 NADP oxidoreductase coenzyme F420-dependent DJ48_1178 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJ48_1179 PF05525 Branched-chain amino acid transport protein DJ48_118 PF01979 Amidohydrolase family DJ48_1180 PF13520 Amino acid permease DJ48_1181 PF13520 Amino acid permease DJ48_1182 PF01541 GIY-YIG catalytic domain DJ48_1182 PF12826 Helix-hairpin-helix motif DJ48_1182 PF02151 UvrB/uvrC motif DJ48_1182 PF08459 UvrC Helix-hairpin-helix N-terminal DJ48_1184 PF01381 Helix-turn-helix DJ48_1185 PF17763 Glutaminase/Asparaginase C-terminal domain DJ48_1185 PF00710 Asparaginase, N-terminal DJ48_1186 PF00206 Lyase DJ48_1186 PF10415 Fumarase C C-terminus DJ48_1189 PF13823 Alcohol dehydrogenase GroES-associated DJ48_1189 PF08240 Alcohol dehydrogenase GroES-like domain DJ48_1189 PF00107 Zinc-binding dehydrogenase DJ48_119 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DJ48_1190 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ48_1191 PF11553 Protein of unknown function (DUF3231) DJ48_1192 PF10710 Protein of unknown function (DUF2512) DJ48_1193 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ48_1195 PF00324 Amino acid permease DJ48_1196 PF00324 Amino acid permease DJ48_1197 PF01810 LysE type translocator DJ48_1198 PF08892 YqcI/YcgG family DJ48_12 PF01515 Phosphate acetyl/butaryl transferase DJ48_1200 PF07875 Coat F domain DJ48_1203 PF00753 Metallo-beta-lactamase superfamily DJ48_1204 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DJ48_1204 PF00391 PEP-utilising enzyme, mobile domain DJ48_1205 PF00440 Bacterial regulatory proteins, tetR family DJ48_1207 PF02915 Rubrerythrin DJ48_1214 PF02770 Acyl-CoA dehydrogenase, middle domain DJ48_1214 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ48_1214 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DJ48_1217 PF07454 Stage II sporulation protein P (SpoIIP) DJ48_1218 PF03932 CutC family DJ48_1219 PF10502 Signal peptidase, peptidase S26 DJ48_122 PF00874 PRD domain DJ48_122 PF03123 CAT RNA binding domain DJ48_1220 PF01614 Bacterial transcriptional regulator DJ48_1220 PF09339 IclR helix-turn-helix domain DJ48_1221 PF02682 Carboxyltransferase domain, subdomain C and D DJ48_1222 PF02626 Carboxyltransferase domain, subdomain A and B DJ48_1223 PF03746 LamB/YcsF family DJ48_1227 PF01470 Pyroglutamyl peptidase DJ48_1228 PF02146 Sir2 family DJ48_123 PF00367 phosphotransferase system, EIIB DJ48_123 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DJ48_123 PF02378 Phosphotransferase system, EIIC DJ48_1230 PF03717 Penicillin-binding Protein dimerisation domain DJ48_1230 PF00905 Penicillin binding protein transpeptidase domain DJ48_1232 PF10502 Signal peptidase, peptidase S26 DJ48_1234 PF00293 NUDIX domain DJ48_1238 PF10898 Protein of unknown function (DUF2716) DJ48_1239 PF08713 DNA alkylation repair enzyme DJ48_124 PF00381 PTS HPr component phosphorylation site DJ48_1241 PF00324 Amino acid permease DJ48_1242 PF13302 Acetyltransferase (GNAT) domain DJ48_1243 PF01925 Sulfite exporter TauE/SafE DJ48_1249 PF00561 alpha/beta hydrolase fold DJ48_125 PF00391 PEP-utilising enzyme, mobile domain DJ48_125 PF05524 PEP-utilising enzyme, N-terminal DJ48_125 PF02896 PEP-utilising enzyme, TIM barrel domain DJ48_1250 PF00072 Response regulator receiver domain DJ48_1250 PF00486 Transcriptional regulatory protein, C terminal DJ48_1251 PF00512 His Kinase A (phospho-acceptor) domain DJ48_1251 PF00672 HAMP domain DJ48_1253 PF13031 Protein of unknown function (DUF3892) DJ48_1254 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DJ48_1255 PF00155 Aminotransferase class I and II DJ48_1255 PF00392 Bacterial regulatory proteins, gntR family DJ48_1256 PF00892 EamA-like transporter family DJ48_1259 PF00583 Acetyltransferase (GNAT) family DJ48_1260 PF12833 Helix-turn-helix domain DJ48_1265 PF12704 MacB-like periplasmic core domain DJ48_1265 PF02687 FtsX-like permease family DJ48_1265 PF00005 ABC transporter DJ48_1267 PF00392 Bacterial regulatory proteins, gntR family DJ48_1268 PF00005 ABC transporter DJ48_1271 PF00293 NUDIX domain DJ48_1273 PF03764 Elongation factor G, domain IV DJ48_1273 PF14492 Elongation Factor G, domain II DJ48_1273 PF00679 Elongation factor G C-terminus DJ48_1273 PF00009 Elongation factor Tu GTP binding domain DJ48_1274 PF01047 MarR family DJ48_1275 PF00881 Nitroreductase family DJ48_1277 PF17863 AAA lid domain DJ48_1277 PF07726 ATPase family associated with various cellular activities (AAA) DJ48_128 PF00881 Nitroreductase family DJ48_1282 PF00144 Beta-lactamase DJ48_1283 PF13382 Adenine deaminase C-terminal domain DJ48_1283 PF01979 Amidohydrolase family DJ48_1285 PF06628 Catalase-related immune-responsive DJ48_1285 PF00199 Catalase DJ48_1286 PF00202 Aminotransferase class-III DJ48_1288 PF00535 Glycosyl transferase family 2 DJ48_1289 PF00535 Glycosyl transferase family 2 DJ48_129 PF00990 Diguanylate cyclase, GGDEF domain DJ48_1292 PF00535 Glycosyl transferase family 2 DJ48_1294 PF07690 Major Facilitator Superfamily DJ48_1297 PF17863 AAA lid domain DJ48_1297 PF07726 ATPase family associated with various cellular activities (AAA) DJ48_13 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DJ48_13 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ48_130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJ48_130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ48_1301 PF12681 Glyoxalase-like domain DJ48_1302 PF13302 Acetyltransferase (GNAT) domain DJ48_1304 PF00072 Response regulator receiver domain DJ48_1304 PF04397 LytTr DNA-binding domain DJ48_1306 PF10086 YhfC intramembrane metalloprotease DJ48_1309 PF13443 Cro/C1-type HTH DNA-binding domain DJ48_131 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJ48_131 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ48_1310 PF11188 Protein of unknown function (DUF2975) DJ48_1311 PF00245 Alkaline phosphatase DJ48_1312 PF00487 Fatty acid desaturase DJ48_1313 PF01139 tRNA-splicing ligase RtcB DJ48_1314 PF00324 Amino acid permease DJ48_1315 PF01614 Bacterial transcriptional regulator DJ48_1315 PF09339 IclR helix-turn-helix domain DJ48_1316 PF01546 Peptidase family M20/M25/M40 DJ48_1317 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJ48_1317 PF03807 NADP oxidoreductase coenzyme F420-dependent DJ48_1318 PF01472 PUA domain DJ48_1318 PF00696 Amino acid kinase family DJ48_1319 PF00171 Aldehyde dehydrogenase family DJ48_1320 PF07662 Na+ dependent nucleoside transporter C-terminus DJ48_1320 PF01773 Na+ dependent nucleoside transporter N-terminus DJ48_1324 PF03992 Antibiotic biosynthesis monooxygenase DJ48_1328 PF01791 DeoC/LacD family aldolase DJ48_1330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ48_1330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ48_1331 PF04198 Putative sugar-binding domain DJ48_1331 PF00325 Bacterial regulatory proteins, crp family DJ48_1332 PF00005 ABC transporter DJ48_1333 PF02653 Branched-chain amino acid transport system / permease component DJ48_1334 PF02653 Branched-chain amino acid transport system / permease component DJ48_1335 PF13407 Periplasmic binding protein domain DJ48_1336 PF06039 Malate:quinone oxidoreductase (Mqo) DJ48_134 PF03079 ARD/ARD' family DJ48_1341 PF08281 Sigma-70, region 4 DJ48_1341 PF04542 Sigma-70 region 2 DJ48_1344 PF06725 3D domain DJ48_1344 PF01476 LysM domain DJ48_1347 PF01636 Phosphotransferase enzyme family DJ48_135 PF00596 Class II Aldolase and Adducin N-terminal domain DJ48_1351 PF00793 DAHP synthetase I family DJ48_1351 PF01817 Chorismate mutase type II DJ48_1352 PF01264 Chorismate synthase DJ48_1353 PF00155 Aminotransferase class I and II DJ48_1354 PF01842 ACT domain DJ48_1354 PF02153 Prephenate dehydrogenase DJ48_1355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DJ48_1358 PF16295 Tetracyclin repressor-like, C-terminal domain DJ48_1358 PF00440 Bacterial regulatory proteins, tetR family DJ48_1359 PF03176 MMPL family DJ48_1361 PF00005 ABC transporter DJ48_1361 PF12848 ABC transporter DJ48_1362 PF00884 Sulfatase DJ48_1363 PF03741 Integral membrane protein TerC family DJ48_1365 PF01522 Polysaccharide deacetylase DJ48_1367 PF08713 DNA alkylation repair enzyme DJ48_137 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DJ48_137 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain DJ48_1371 PF12867 DinB superfamily DJ48_1372 PF13536 Putative multidrug resistance efflux transporter DJ48_1377 PF02522 Aminoglycoside 3-N-acetyltransferase DJ48_138 PF00155 Aminotransferase class I and II DJ48_1385 PF00005 ABC transporter DJ48_1386 PF00005 ABC transporter DJ48_1387 PF09084 NMT1/THI5 like DJ48_1388 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_1389 PF00296 Luciferase-like monooxygenase DJ48_139 PF00795 Carbon-nitrogen hydrolase DJ48_1391 PF01594 AI-2E family transporter DJ48_1399 PF00005 ABC transporter DJ48_14 PF00871 Acetokinase family DJ48_140 PF01636 Phosphotransferase enzyme family DJ48_1403 PF03630 Fumble DJ48_1404 PF07977 FabA-like domain DJ48_1405 PF00155 Aminotransferase class I and II DJ48_1412 PF08241 Methyltransferase domain DJ48_1414 PF01156 Inosine-uridine preferring nucleoside hydrolase DJ48_1415 PF04226 Transglycosylase associated protein DJ48_1419 PF07690 Major Facilitator Superfamily DJ48_1420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_1420 PF12793 Sugar transport-related sRNA regulator N-term DJ48_1421 PF13171 Protein of unknown function (DUF4004) DJ48_1422 PF04519 Polymer-forming cytoskeletal DJ48_1424 PF07690 Major Facilitator Superfamily DJ48_1428 PF02645 Uncharacterised protein, DegV family COG1307 DJ48_1430 PF08439 Oligopeptidase F DJ48_1430 PF01432 Peptidase family M3 DJ48_1431 PF03808 Glycosyl transferase WecB/TagA/CpsF family DJ48_1433 PF01048 Phosphorylase superfamily DJ48_1437 PF00072 Response regulator receiver domain DJ48_1437 PF00486 Transcriptional regulatory protein, C terminal DJ48_1438 PF00989 PAS fold DJ48_1438 PF00512 His Kinase A (phospho-acceptor) domain DJ48_1438 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_1438 PF16736 Single Cache-like DJ48_1439 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DJ48_1439 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DJ48_144 PF03551 Transcriptional regulator PadR-like family DJ48_1444 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ48_1446 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ48_1446 PF13378 Enolase C-terminal domain-like DJ48_1447 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain DJ48_1447 PF00877 NlpC/P60 family DJ48_1448 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_1449 PF00117 Glutamine amidotransferase class-I DJ48_1449 PF03352 Methyladenine glycosylase DJ48_1449 PF13302 Acetyltransferase (GNAT) domain DJ48_1449 PF13673 Acetyltransferase (GNAT) domain DJ48_1449 PF00958 GMP synthase C terminal domain DJ48_1450 PF04914 DltD protein DJ48_1453 PF09335 SNARE associated Golgi protein DJ48_1454 PF08876 Domain of unknown function (DUF1836) DJ48_1457 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_1457 PF04324 BFD-like [2Fe-2S] binding domain DJ48_1459 PF04324 BFD-like [2Fe-2S] binding domain DJ48_1459 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_1460 PF02954 Bacterial regulatory protein, Fis family DJ48_1460 PF13188 PAS domain DJ48_1460 PF00158 Sigma-54 interaction domain DJ48_1461 PF01266 FAD dependent oxidoreductase DJ48_1462 PF05544 Proline racemase DJ48_1463 PF05544 Proline racemase DJ48_1464 PF00701 Dihydrodipicolinate synthetase family DJ48_1465 PF00171 Aldehyde dehydrogenase family DJ48_1466 PF01235 Sodium:alanine symporter family DJ48_1467 PF02627 Carboxymuconolactone decarboxylase family DJ48_1469 PF18416 N-acetylglucosamine binding protein domain 2 DJ48_1469 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DJ48_1470 PF02833 DHHA2 domain DJ48_1470 PF01368 DHH family DJ48_1478 PF16124 RecQ zinc-binding DJ48_1478 PF09382 RQC domain DJ48_1478 PF00570 HRDC domain DJ48_1478 PF00271 Helicase conserved C-terminal domain DJ48_1478 PF00270 DEAD/DEAH box helicase DJ48_1479 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like DJ48_1482 PF13538 UvrD-like helicase C-terminal domain DJ48_1493 PF13567 Domain of unknown function (DUF4131) DJ48_1493 PF03772 Competence protein DJ48_1493 PF00753 Metallo-beta-lactamase superfamily DJ48_1498 PF10990 Protein of unknown function (DUF2809) DJ48_15 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ48_15 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_150 PF00293 NUDIX domain DJ48_1502 PF18416 N-acetylglucosamine binding protein domain 2 DJ48_1502 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DJ48_1503 PF13673 Acetyltransferase (GNAT) domain DJ48_1504 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DJ48_1507 PF00574 Clp protease DJ48_1508 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DJ48_1509 PF00571 CBS domain DJ48_1509 PF00005 ABC transporter DJ48_151 PF02803 Thiolase, C-terminal domain DJ48_151 PF00108 Thiolase, N-terminal domain DJ48_1510 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_1516 PF04229 GrpB protein DJ48_1516 PF13673 Acetyltransferase (GNAT) domain DJ48_1517 PF00106 short chain dehydrogenase DJ48_1519 PF00676 Dehydrogenase E1 component DJ48_1520 PF02780 Transketolase, C-terminal domain DJ48_1520 PF02779 Transketolase, pyrimidine binding domain DJ48_1521 PF02817 e3 binding domain DJ48_1521 PF00364 Biotin-requiring enzyme DJ48_1521 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DJ48_1522 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ48_1522 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_1526 PF02082 Transcriptional regulator DJ48_1527 PF00403 Heavy-metal-associated domain DJ48_1527 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_1527 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ48_1531 PF00455 DeoR C terminal sensor domain DJ48_1531 PF08220 DeoR-like helix-turn-helix domain DJ48_1532 PF13302 Acetyltransferase (GNAT) domain DJ48_1535 PF00158 Sigma-54 interaction domain DJ48_1535 PF02954 Bacterial regulatory protein, Fis family DJ48_1535 PF01590 GAF domain DJ48_1540 PF13344 Haloacid dehalogenase-like hydrolase DJ48_1540 PF00293 NUDIX domain DJ48_1541 PF00440 Bacterial regulatory proteins, tetR family DJ48_1541 PF08359 YsiA-like protein, C-terminal region DJ48_1542 PF00266 Aminotransferase class-V DJ48_1543 PF04199 Putative cyclase DJ48_1544 PF03301 Tryptophan 2,3-dioxygenase DJ48_1547 PF07486 Cell Wall Hydrolase DJ48_1547 PF01471 Putative peptidoglycan binding domain DJ48_1548 PF14620 YpeB sporulation DJ48_1548 PF03413 Peptidase propeptide and YPEB domain DJ48_1549 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DJ48_1552 PF06081 Aromatic acid exporter family member 1 DJ48_1557 PF00561 alpha/beta hydrolase fold DJ48_1558 PF00392 Bacterial regulatory proteins, gntR family DJ48_1558 PF00155 Aminotransferase class I and II DJ48_1559 PF00892 EamA-like transporter family DJ48_1560 PF00308 Bacterial dnaA protein DJ48_1560 PF11638 DnaA N-terminal domain DJ48_1560 PF08299 Bacterial dnaA protein helix-turn-helix DJ48_1561 PF00344 SecY translocase DJ48_1565 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ48_1565 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ48_1565 PF01447 Thermolysin metallopeptidase, catalytic domain DJ48_1565 PF03413 Peptidase propeptide and YPEB domain DJ48_1566 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DJ48_1566 PF03714 Bacterial pullanase-associated domain DJ48_1566 PF00128 Alpha amylase, catalytic domain DJ48_1568 PF00668 Condensation domain DJ48_1568 PF00550 Phosphopantetheine attachment site DJ48_1568 PF00501 AMP-binding enzyme DJ48_1568 PF13193 AMP-binding enzyme C-terminal domain DJ48_1569 PF00282 Pyridoxal-dependent decarboxylase conserved domain DJ48_1570 PF07859 alpha/beta hydrolase fold DJ48_1573 PF13419 Haloacid dehalogenase-like hydrolase DJ48_1578 PF01266 FAD dependent oxidoreductase DJ48_1586 PF01541 GIY-YIG catalytic domain DJ48_1588 PF02673 Bacitracin resistance protein BacA DJ48_159 PF00005 ABC transporter DJ48_159 PF03459 TOBE domain DJ48_159 PF17912 MalK OB fold domain DJ48_1591 PF12867 DinB superfamily DJ48_1593 PF08000 Bacterial PH domain DJ48_1594 PF01734 Patatin-like phospholipase DJ48_16 PF00676 Dehydrogenase E1 component DJ48_160 PF00128 Alpha amylase, catalytic domain DJ48_160 PF16657 Maltogenic Amylase, C-terminal domain DJ48_1600 PF09234 Domain of unknown function (DUF1963) DJ48_1604 PF12706 Beta-lactamase superfamily domain DJ48_1607 PF00293 NUDIX domain DJ48_1608 PF02767 DNA polymerase III beta subunit, central domain DJ48_1608 PF02768 DNA polymerase III beta subunit, C-terminal domain DJ48_1608 PF00712 DNA polymerase III beta subunit, N-terminal domain DJ48_1609 PF09297 NADH pyrophosphatase zinc ribbon domain DJ48_1609 PF00293 NUDIX domain DJ48_161 PF16657 Maltogenic Amylase, C-terminal domain DJ48_161 PF02903 Alpha amylase, N-terminal ig-like domain DJ48_161 PF00128 Alpha amylase, catalytic domain DJ48_1611 PF07690 Major Facilitator Superfamily DJ48_1615 PF00293 NUDIX domain DJ48_1617 PF01270 Glycosyl hydrolases family 8 DJ48_1618 PF00892 EamA-like transporter family DJ48_1619 PF00392 Bacterial regulatory proteins, gntR family DJ48_1619 PF00155 Aminotransferase class I and II DJ48_162 PF13416 Bacterial extracellular solute-binding protein DJ48_1620 PF00392 Bacterial regulatory proteins, gntR family DJ48_1620 PF00155 Aminotransferase class I and II DJ48_1623 PF03009 Glycerophosphoryl diester phosphodiesterase family DJ48_1627 PF07690 Major Facilitator Superfamily DJ48_1629 PF00144 Beta-lactamase DJ48_163 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_1632 PF01965 DJ-1/PfpI family DJ48_1638 PF11954 Domain of unknown function (DUF3471) DJ48_1638 PF00144 Beta-lactamase DJ48_164 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_1642 PF00107 Zinc-binding dehydrogenase DJ48_1642 PF08240 Alcohol dehydrogenase GroES-like domain DJ48_1645 PF00512 His Kinase A (phospho-acceptor) domain DJ48_1645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_1648 PF12558 ATP-binding cassette cobalt transporter DJ48_1648 PF00005 ABC transporter DJ48_1649 PF07155 ECF-type riboflavin transporter, S component DJ48_165 PF00356 Bacterial regulatory proteins, lacI family DJ48_165 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJ48_1650 PF01177 Asp/Glu/Hydantoin racemase DJ48_1651 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DJ48_1653 PF00512 His Kinase A (phospho-acceptor) domain DJ48_1653 PF13426 PAS domain DJ48_1653 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_1653 PF13188 PAS domain DJ48_1653 PF00989 PAS fold DJ48_1657 PF00067 Cytochrome P450 DJ48_1659 PF07561 Domain of Unknown Function (DUF1540) DJ48_166 PF00155 Aminotransferase class I and II DJ48_1660 PF00132 Bacterial transferase hexapeptide (six repeats) DJ48_1662 PF00067 Cytochrome P450 DJ48_1678 PF03070 TENA/THI-4/PQQC family DJ48_1679 PF01820 D-ala D-ala ligase N-terminus DJ48_1679 PF07478 D-ala D-ala ligase C-terminus DJ48_168 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_168 PF00512 His Kinase A (phospho-acceptor) domain DJ48_1680 PF00155 Aminotransferase class I and II DJ48_1680 PF00392 Bacterial regulatory proteins, gntR family DJ48_1681 PF01842 ACT domain DJ48_1681 PF00742 Homoserine dehydrogenase DJ48_1681 PF03447 Homoserine dehydrogenase, NAD binding domain DJ48_1685 PF02687 FtsX-like permease family DJ48_1686 PF00005 ABC transporter DJ48_1691 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_1693 PF00486 Transcriptional regulatory protein, C terminal DJ48_1693 PF00072 Response regulator receiver domain DJ48_1695 PF07486 Cell Wall Hydrolase DJ48_1698 PF02875 Mur ligase family, glutamate ligase domain DJ48_1698 PF01225 Mur ligase family, catalytic domain DJ48_1698 PF08245 Mur ligase middle domain DJ48_17 PF02780 Transketolase, C-terminal domain DJ48_17 PF02779 Transketolase, pyrimidine binding domain DJ48_170 PF14040 Deoxyribonuclease NucA/NucB DJ48_1701 PF08240 Alcohol dehydrogenase GroES-like domain DJ48_1701 PF00107 Zinc-binding dehydrogenase DJ48_1703 PF00155 Aminotransferase class I and II DJ48_1703 PF00392 Bacterial regulatory proteins, gntR family DJ48_1706 PF12833 Helix-turn-helix domain DJ48_1707 PF01636 Phosphotransferase enzyme family DJ48_1711 PF07690 Major Facilitator Superfamily DJ48_1712 PF09278 MerR, DNA binding DJ48_1712 PF00376 MerR family regulatory protein DJ48_1713 PF00144 Beta-lactamase DJ48_1716 PF17755 UvrA DNA-binding domain DJ48_1716 PF17760 UvrA interaction domain DJ48_1716 PF17760 UvrA interaction domain DJ48_1716 PF17755 UvrA DNA-binding domain DJ48_172 PF08267 Cobalamin-independent synthase, N-terminal domain DJ48_172 PF01717 Cobalamin-independent synthase, Catalytic domain DJ48_1720 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ48_1720 PF03413 Peptidase propeptide and YPEB domain DJ48_1720 PF01447 Thermolysin metallopeptidase, catalytic domain DJ48_1720 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ48_1721 PF03413 Peptidase propeptide and YPEB domain DJ48_1721 PF01447 Thermolysin metallopeptidase, catalytic domain DJ48_1721 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ48_1721 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ48_1725 PF01048 Phosphorylase superfamily DJ48_1726 PF13021 Domain of unknown function (DUF3885) DJ48_1727 PF01966 HD domain DJ48_1728 PF00072 Response regulator receiver domain DJ48_1728 PF00486 Transcriptional regulatory protein, C terminal DJ48_1729 PF00512 His Kinase A (phospho-acceptor) domain DJ48_1729 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_1730 PF07943 Penicillin-binding protein 5, C-terminal domain DJ48_1730 PF00768 D-alanyl-D-alanine carboxypeptidase DJ48_1731 PF05163 DinB family DJ48_1733 PF00485 Phosphoribulokinase / Uridine kinase family DJ48_1734 PF00583 Acetyltransferase (GNAT) family DJ48_1736 PF00501 AMP-binding enzyme DJ48_1736 PF13193 AMP-binding enzyme C-terminal domain DJ48_1736 PF16177 Acetyl-coenzyme A synthetase N-terminus DJ48_1737 PF01039 Carboxyl transferase domain DJ48_1738 PF00378 Enoyl-CoA hydratase/isomerase DJ48_1739 PF00682 HMGL-like DJ48_174 PF07690 Major Facilitator Superfamily DJ48_1740 PF00364 Biotin-requiring enzyme DJ48_1741 PF00289 Biotin carboxylase, N-terminal domain DJ48_1741 PF02785 Biotin carboxylase C-terminal domain DJ48_1741 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ48_1742 PF02770 Acyl-CoA dehydrogenase, middle domain DJ48_1742 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ48_1742 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ48_1747 PF00005 ABC transporter DJ48_1750 PF00581 Rhodanese-like domain DJ48_1751 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_1753 PF13302 Acetyltransferase (GNAT) domain DJ48_1754 PF00990 Diguanylate cyclase, GGDEF domain DJ48_1754 PF00563 EAL domain DJ48_1754 PF03707 Bacterial signalling protein N terminal repeat DJ48_1757 PF00440 Bacterial regulatory proteins, tetR family DJ48_1760 PF01520 N-acetylmuramoyl-L-alanine amidase DJ48_1760 PF00395 S-layer homology domain DJ48_1762 PF02557 D-alanyl-D-alanine carboxypeptidase DJ48_1765 PF01381 Helix-turn-helix DJ48_1766 PF18801 response regulator aspartate phosphatase H, N terminal DJ48_1768 PF00149 Calcineurin-like phosphoesterase DJ48_1768 PF02872 5'-nucleotidase, C-terminal domain DJ48_1771 PF04962 KduI/IolB family DJ48_1772 PF01116 Fructose-bisphosphate aldolase class-II DJ48_1773 PF01261 Xylose isomerase-like TIM barrel DJ48_1774 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ48_1774 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ48_1774 PF00205 Thiamine pyrophosphate enzyme, central domain DJ48_1775 PF00171 Aldehyde dehydrogenase family DJ48_1776 PF00294 pfkB family carbohydrate kinase DJ48_1777 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ48_1777 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJ48_1778 PF07690 Major Facilitator Superfamily DJ48_1779 PF00356 Bacterial regulatory proteins, lacI family DJ48_1782 PF00905 Penicillin binding protein transpeptidase domain DJ48_1782 PF03717 Penicillin-binding Protein dimerisation domain DJ48_1784 PF08281 Sigma-70, region 4 DJ48_1784 PF04542 Sigma-70 region 2 DJ48_1788 PF07687 Peptidase dimerisation domain DJ48_1788 PF01546 Peptidase family M20/M25/M40 DJ48_179 PF14177 YkyB-like protein DJ48_1794 PF14171 Toxin SpoIISA, type II toxin-antitoxin system DJ48_1795 PF00300 Histidine phosphatase superfamily (branch 1) DJ48_1796 PF12802 MarR family DJ48_1797 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ48_1797 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ48_1797 PF00205 Thiamine pyrophosphate enzyme, central domain DJ48_1798 PF08241 Methyltransferase domain DJ48_18 PF02817 e3 binding domain DJ48_18 PF00364 Biotin-requiring enzyme DJ48_18 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DJ48_180 PF02541 Ppx/GppA phosphatase family DJ48_1800 PF09313 Domain of unknown function (DUF1971) DJ48_1800 PF03848 Tellurite resistance protein TehB DJ48_1801 PF00005 ABC transporter DJ48_1801 PF12704 MacB-like periplasmic core domain DJ48_1801 PF02687 FtsX-like permease family DJ48_1804 PF17932 Tetracyclin repressor-like, C-terminal domain DJ48_1804 PF00440 Bacterial regulatory proteins, tetR family DJ48_1806 PF00270 DEAD/DEAH box helicase DJ48_1806 PF00271 Helicase conserved C-terminal domain DJ48_1809 PF16123 Hydroxyacylglutathione hydrolase C-terminus DJ48_1809 PF00753 Metallo-beta-lactamase superfamily DJ48_181 PF13089 Polyphosphate kinase N-terminal domain DJ48_181 PF17941 Polyphosphate kinase C-terminal domain 1 DJ48_181 PF13090 Polyphosphate kinase C-terminal domain 2 DJ48_181 PF02503 Polyphosphate kinase middle domain DJ48_1812 PF00291 Pyridoxal-phosphate dependent enzyme DJ48_1813 PF00266 Aminotransferase class-V DJ48_1814 PF02660 Glycerol-3-phosphate acyltransferase DJ48_1815 PF01869 BadF/BadG/BcrA/BcrD ATPase family DJ48_1816 PF03702 Anhydro-N-acetylmuramic acid kinase DJ48_1818 PF02378 Phosphotransferase system, EIIC DJ48_1820 PF02638 Glycosyl hydrolase-like 10 DJ48_1825 PF12680 SnoaL-like domain DJ48_1825 PF04542 Sigma-70 region 2 DJ48_1825 PF08281 Sigma-70, region 4 DJ48_1826 PF00890 FAD binding domain DJ48_183 PF10518 TAT (twin-arginine translocation) pathway signal sequence DJ48_183 PF00149 Calcineurin-like phosphoesterase DJ48_1830 PF07883 Cupin domain DJ48_1830 PF01381 Helix-turn-helix DJ48_1831 PF01810 LysE type translocator DJ48_1834 PF00005 ABC transporter DJ48_1834 PF00664 ABC transporter transmembrane region DJ48_1835 PF00005 ABC transporter DJ48_1835 PF00664 ABC transporter transmembrane region DJ48_1838 PF03473 MOSC domain DJ48_1838 PF03475 3-alpha domain DJ48_1839 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ48_1839 PF03466 LysR substrate binding domain DJ48_1842 PF02774 Semialdehyde dehydrogenase, dimerisation domain DJ48_1842 PF01118 Semialdehyde dehydrogenase, NAD binding domain DJ48_1843 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ48_1843 PF03466 LysR substrate binding domain DJ48_185 PF10388 EAL-domain associated signalling protein domain DJ48_185 PF00563 EAL domain DJ48_1855 PF00313 'Cold-shock' DNA-binding domain DJ48_1857 PF13302 Acetyltransferase (GNAT) domain DJ48_1865 PF00583 Acetyltransferase (GNAT) family DJ48_1868 PF00302 Chloramphenicol acetyltransferase DJ48_1870 PF03176 MMPL family DJ48_1871 PF03176 MMPL family DJ48_1873 PF00753 Metallo-beta-lactamase superfamily DJ48_1873 PF16123 Hydroxyacylglutathione hydrolase C-terminus DJ48_188 PF08796 Protein of unknown function (DUF1797) DJ48_1882 PF13649 Methyltransferase domain DJ48_1887 PF07690 Major Facilitator Superfamily DJ48_1888 PF12146 Serine aminopeptidase, S33 DJ48_1890 PF00005 ABC transporter DJ48_1891 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ48_1891 PF02824 TGS domain DJ48_1891 PF03129 Anticodon binding domain DJ48_1891 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ48_1892 PF00849 RNA pseudouridylate synthase DJ48_1892 PF01479 S4 domain DJ48_1893 PF00849 RNA pseudouridylate synthase DJ48_1893 PF01479 S4 domain DJ48_1894 PF16291 Domain of unknown function (DUF4937 DJ48_1897 PF01235 Sodium:alanine symporter family DJ48_1898 PF00082 Subtilase family DJ48_1899 PF05163 DinB family DJ48_19 PF01098 Cell cycle protein DJ48_190 PF04308 Ribonuclease H-like DJ48_1901 PF00216 Bacterial DNA-binding protein DJ48_1904 PF07690 Major Facilitator Superfamily DJ48_1905 PF03621 MbtH-like protein DJ48_1906 PF00975 Thioesterase domain DJ48_1906 PF00550 Phosphopantetheine attachment site DJ48_1906 PF00501 AMP-binding enzyme DJ48_1906 PF13193 AMP-binding enzyme C-terminal domain DJ48_1906 PF00668 Condensation domain DJ48_1907 PF00550 Phosphopantetheine attachment site DJ48_1907 PF00857 Isochorismatase family DJ48_1908 PF13193 AMP-binding enzyme C-terminal domain DJ48_1908 PF00501 AMP-binding enzyme DJ48_1909 PF00425 chorismate binding enzyme DJ48_1910 PF00106 short chain dehydrogenase DJ48_1911 PF07690 Major Facilitator Superfamily DJ48_1913 PF01022 Bacterial regulatory protein, arsR family DJ48_1915 PF13476 AAA domain DJ48_1916 PF00149 Calcineurin-like phosphoesterase DJ48_1916 PF12320 Type 5 capsule protein repressor C-terminal domain DJ48_1917 PF10763 Protein of unknown function (DUF2584) DJ48_1919 PF00378 Enoyl-CoA hydratase/isomerase DJ48_1920 PF01810 LysE type translocator DJ48_1921 PF00171 Aldehyde dehydrogenase family DJ48_1922 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ48_1922 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJ48_1923 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJ48_1923 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ48_1924 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ48_1924 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ48_1924 PF02770 Acyl-CoA dehydrogenase, middle domain DJ48_1926 PF03972 MmgE/PrpD family DJ48_1927 PF00285 Citrate synthase, C-terminal domain DJ48_1928 PF01521 Iron-sulphur cluster biosynthesis DJ48_1929 PF07690 Major Facilitator Superfamily DJ48_193 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ48_193 PF03466 LysR substrate binding domain DJ48_1930 PF00905 Penicillin binding protein transpeptidase domain DJ48_1930 PF00912 Transglycosylase DJ48_1934 PF10676 Spore germination protein gerPA/gerPF DJ48_194 PF14602 Hexapeptide repeat of succinyl-transferase DJ48_194 PF00132 Bacterial transferase hexapeptide (six repeats) DJ48_194 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DJ48_195 PF01546 Peptidase family M20/M25/M40 DJ48_195 PF07687 Peptidase dimerisation domain DJ48_1954 PF04471 Restriction endonuclease DJ48_1956 PF00150 Cellulase (glycosyl hydrolase family 5) DJ48_1956 PF00395 S-layer homology domain DJ48_1956 PF03424 Carbohydrate binding domain (family 17/28) DJ48_1957 PF04740 LXG domain of WXG superfamily DJ48_1957 PF14436 Bacterial EndoU nuclease DJ48_1959 PF00085 Thioredoxin DJ48_1960 PF01569 PAP2 superfamily DJ48_1961 PF01545 Cation efflux family DJ48_1961 PF16916 Dimerisation domain of Zinc Transporter DJ48_1962 PF07070 SpoOM protein DJ48_1965 PF14162 YozD-like protein DJ48_1968 PF06855 YozE SAM-like fold DJ48_1969 PF14122 YokU-like protein, putative antitoxin DJ48_197 PF02254 TrkA-N domain DJ48_197 PF02080 TrkA-C domain DJ48_1970 PF12544 Lysine-2,3-aminomutase DJ48_1971 PF13426 PAS domain DJ48_1971 PF00158 Sigma-54 interaction domain DJ48_1971 PF02954 Bacterial regulatory protein, Fis family DJ48_1972 PF00583 Acetyltransferase (GNAT) family DJ48_1973 PF01546 Peptidase family M20/M25/M40 DJ48_1973 PF07687 Peptidase dimerisation domain DJ48_1974 PF01144 Coenzyme A transferase DJ48_1975 PF01144 Coenzyme A transferase DJ48_1976 PF00202 Aminotransferase class-III DJ48_1978 PF09385 Histidine kinase N terminal DJ48_1979 PF07997 Protein of unknown function (DUF1694) DJ48_198 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DJ48_198 PF00753 Metallo-beta-lactamase superfamily DJ48_198 PF17770 Ribonuclease J C-terminal domain DJ48_1980 PF00171 Aldehyde dehydrogenase family DJ48_1981 PF03471 Transporter associated domain DJ48_1981 PF01595 Cyclin M transmembrane N-terminal domain DJ48_1981 PF00571 CBS domain DJ48_1987 PF13520 Amino acid permease DJ48_1988 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_1989 PF00571 CBS domain DJ48_1989 PF00005 ABC transporter DJ48_1992 PF03358 NADPH-dependent FMN reductase DJ48_1995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ48_1995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ48_1996 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ48_1996 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ48_1999 PF00144 Beta-lactamase DJ48_2 PF01479 S4 domain DJ48_2 PF01728 FtsJ-like methyltransferase DJ48_20 PF00293 NUDIX domain DJ48_20 PF09297 NADH pyrophosphatase zinc ribbon domain DJ48_2002 PF00107 Zinc-binding dehydrogenase DJ48_2002 PF08240 Alcohol dehydrogenase GroES-like domain DJ48_2003 PF01418 Helix-turn-helix domain, rpiR family DJ48_2003 PF01380 SIS domain DJ48_2005 PF00196 Bacterial regulatory proteins, luxR family DJ48_2005 PF00072 Response regulator receiver domain DJ48_2006 PF07730 Histidine kinase DJ48_2006 PF13185 GAF domain DJ48_2007 PF00924 Mechanosensitive ion channel DJ48_2008 PF00011 Hsp20/alpha crystallin family DJ48_2009 PF00293 NUDIX domain DJ48_201 PF01327 Polypeptide deformylase DJ48_2010 PF00857 Isochorismatase family DJ48_2013 PF00881 Nitroreductase family DJ48_2014 PF01063 Amino-transferase class IV DJ48_2015 PF01497 Periplasmic binding protein DJ48_2019 PF13537 Glutamine amidotransferase domain DJ48_2019 PF00733 Asparagine synthase DJ48_2020 PF00011 Hsp20/alpha crystallin family DJ48_2021 PF02630 SCO1/SenC DJ48_2023 PF02645 Uncharacterised protein, DegV family COG1307 DJ48_2025 PF00902 Sec-independent protein translocase protein (TatC) DJ48_2026 PF02416 mttA/Hcf106 family DJ48_2027 PF03006 Haemolysin-III related DJ48_2028 PF01553 Acyltransferase DJ48_2029 PF02525 Flavodoxin-like fold DJ48_203 PF00676 Dehydrogenase E1 component DJ48_2030 PF03717 Penicillin-binding Protein dimerisation domain DJ48_2030 PF00905 Penicillin binding protein transpeptidase domain DJ48_2030 PF05223 NTF2-like N-terminal transpeptidase domain DJ48_2031 PF00186 Dihydrofolate reductase DJ48_2032 PF00303 Thymidylate synthase DJ48_2033 PF07930 D-aminopeptidase, domain B DJ48_2033 PF00144 Beta-lactamase DJ48_2037 PF13419 Haloacid dehalogenase-like hydrolase DJ48_2038 PF14005 YpjP-like protein DJ48_2039 PF05975 Bacterial ABC transporter protein EcsB DJ48_204 PF02779 Transketolase, pyrimidine binding domain DJ48_204 PF02780 Transketolase, C-terminal domain DJ48_2040 PF00005 ABC transporter DJ48_2044 PF00583 Acetyltransferase (GNAT) family DJ48_2045 PF01980 tRNA-methyltransferase O DJ48_2046 PF01177 Asp/Glu/Hydantoin racemase DJ48_2047 PF00465 Iron-containing alcohol dehydrogenase DJ48_2049 PF13419 Haloacid dehalogenase-like hydrolase DJ48_205 PF00364 Biotin-requiring enzyme DJ48_205 PF02817 e3 binding domain DJ48_205 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DJ48_2050 PF10997 Alternate to MurJ DJ48_2053 PF00209 Sodium:neurotransmitter symporter family DJ48_2056 PF00672 HAMP domain DJ48_2056 PF00512 His Kinase A (phospho-acceptor) domain DJ48_2056 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_2057 PF00486 Transcriptional regulatory protein, C terminal DJ48_2057 PF00072 Response regulator receiver domain DJ48_2058 PF00939 Sodium:sulfate symporter transmembrane region DJ48_2059 PF02595 Glycerate kinase family DJ48_206 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_206 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ48_2076 PF12538 DNA transporter DJ48_2076 PF01580 FtsK/SpoIIIE family DJ48_2080 PF00152 tRNA synthetases class II (D, K and N) DJ48_2080 PF01336 OB-fold nucleic acid binding domain DJ48_2081 PF01225 Mur ligase family, catalytic domain DJ48_2081 PF02875 Mur ligase family, glutamate ligase domain DJ48_2081 PF08245 Mur ligase middle domain DJ48_2084 PF00133 tRNA synthetases class I (I, L, M and V) DJ48_2084 PF08264 Anticodon-binding domain of tRNA DJ48_2090 PF05746 DALR anticodon binding domain DJ48_2090 PF03485 Arginyl tRNA synthetase N terminal domain DJ48_2090 PF00750 tRNA synthetases class I (R) DJ48_2091 PF04445 Putative SAM-dependent methyltransferase DJ48_2092 PF06491 Disulphide isomerase DJ48_2094 PF13769 Virulence factor DJ48_2094 PF08712 Scaffold protein Nfu/NifU N terminal DJ48_2095 PF01494 FAD binding domain DJ48_2096 PF01494 FAD binding domain DJ48_2097 PF00440 Bacterial regulatory proteins, tetR family DJ48_2098 PF00436 Single-strand binding protein family DJ48_21 PF11208 Protein of unknown function (DUF2992) DJ48_2101 PF00005 ABC transporter DJ48_2101 PF16326 ABC transporter C-terminal domain DJ48_2101 PF12848 ABC transporter DJ48_2102 PF01966 HD domain DJ48_2105 PF01510 N-acetylmuramoyl-L-alanine amidase DJ48_2108 PF04232 Stage V sporulation protein S (SpoVS) DJ48_2115 PF04405 Domain of Unknown function (DUF542) DJ48_2115 PF01814 Hemerythrin HHE cation binding domain DJ48_2116 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_2116 PF18267 Rubredoxin NAD+ reductase C-terminal domain DJ48_2116 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DJ48_2116 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DJ48_2116 PF04324 BFD-like [2Fe-2S] binding domain DJ48_2117 PF00355 Rieske [2Fe-2S] domain DJ48_2118 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ48_2119 PF01903 CbiX DJ48_2123 PF07690 Major Facilitator Superfamily DJ48_2125 PF02391 MoaE protein DJ48_2126 PF03454 MoeA C-terminal region (domain IV) DJ48_2126 PF00994 Probable molybdopterin binding domain DJ48_2126 PF03453 MoeA N-terminal region (domain I and II) DJ48_2127 PF00899 ThiF family DJ48_2128 PF04055 Radical SAM superfamily DJ48_2128 PF06463 Molybdenum Cofactor Synthesis C DJ48_2129 PF00027 Cyclic nucleotide-binding domain DJ48_2129 PF00325 Bacterial regulatory proteins, crp family DJ48_2131 PF00005 ABC transporter DJ48_2132 PF00155 Aminotransferase class I and II DJ48_2132 PF00392 Bacterial regulatory proteins, gntR family DJ48_2133 PF02665 Nitrate reductase gamma subunit DJ48_2134 PF02613 Nitrate reductase delta subunit DJ48_2135 PF14711 Respiratory nitrate reductase beta C-terminal DJ48_2135 PF13247 4Fe-4S dicluster domain DJ48_2136 PF14710 Respiratory nitrate reductase alpha N-terminal DJ48_2136 PF00384 Molybdopterin oxidoreductase DJ48_2136 PF01568 Molydopterin dinucleotide binding domain DJ48_2139 PF07726 ATPase family associated with various cellular activities (AAA) DJ48_2139 PF17863 AAA lid domain DJ48_214 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DJ48_214 PF01276 Orn/Lys/Arg decarboxylase, major domain DJ48_2140 PF01882 Protein of unknown function DUF58 DJ48_2141 PF13559 Domain of unknown function (DUF4129) DJ48_2141 PF01841 Transglutaminase-like superfamily DJ48_2141 PF11992 Domain of unknown function (DUF3488) DJ48_2142 PF00255 Glutathione peroxidase DJ48_2147 PF04542 Sigma-70 region 2 DJ48_2147 PF08281 Sigma-70, region 4 DJ48_2148 PF08240 Alcohol dehydrogenase GroES-like domain DJ48_2148 PF00107 Zinc-binding dehydrogenase DJ48_215 PF05256 Uncharacterised protein family (UPF0223) DJ48_2150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_2151 PF01261 Xylose isomerase-like TIM barrel DJ48_2152 PF00270 DEAD/DEAH box helicase DJ48_2152 PF00271 Helicase conserved C-terminal domain DJ48_2154 PF01268 Formate--tetrahydrofolate ligase DJ48_2155 PF01209 ubiE/COQ5 methyltransferase family DJ48_216 PF06335 Protein of unknown function (DUF1054) DJ48_2160 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DJ48_2169 PF00583 Acetyltransferase (GNAT) family DJ48_2175 PF00155 Aminotransferase class I and II DJ48_2175 PF00392 Bacterial regulatory proteins, gntR family DJ48_2176 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ48_2176 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ48_2177 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DJ48_218 PF00459 Inositol monophosphatase family DJ48_2181 PF01168 Alanine racemase, N-terminal domain DJ48_2181 PF00842 Alanine racemase, C-terminal domain DJ48_2184 PF00300 Histidine phosphatase superfamily (branch 1) DJ48_2185 PF01145 SPFH domain / Band 7 family DJ48_2187 PF07690 Major Facilitator Superfamily DJ48_2188 PF01425 Amidase DJ48_2190 PF02557 D-alanyl-D-alanine carboxypeptidase DJ48_2192 PF07454 Stage II sporulation protein P (SpoIIP) DJ48_2196 PF01588 Putative tRNA binding domain DJ48_2197 PF05525 Branched-chain amino acid transport protein DJ48_22 PF06491 Disulphide isomerase DJ48_2200 PF03471 Transporter associated domain DJ48_2200 PF00571 CBS domain DJ48_2200 PF01595 Cyclin M transmembrane N-terminal domain DJ48_2201 PF04306 Protein of unknown function (DUF456) DJ48_2202 PF13460 NAD(P)H-binding DJ48_2205 PF13396 Phospholipase_D-nuclease N-terminal DJ48_2205 PF13091 PLD-like domain DJ48_2206 PF03061 Thioesterase superfamily DJ48_2207 PF09323 Domain of unknown function (DUF1980) DJ48_2208 PF03773 Predicted permease DJ48_221 PF14036 YlaH-like protein DJ48_2210 PF14667 Polysaccharide biosynthesis C-terminal domain DJ48_2210 PF01943 Polysaccharide biosynthesis protein DJ48_2211 PF09335 SNARE associated Golgi protein DJ48_2212 PF00293 NUDIX domain DJ48_2213 PF08757 CotH kinase protein DJ48_2215 PF00300 Histidine phosphatase superfamily (branch 1) DJ48_2217 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_2218 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_2220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DJ48_2220 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DJ48_2221 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ48_2222 PF13460 NAD(P)H-binding DJ48_2224 PF01297 Zinc-uptake complex component A periplasmic DJ48_2224 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DJ48_223 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) DJ48_2235 PF00583 Acetyltransferase (GNAT) family DJ48_2236 PF07683 Cobalamin synthesis protein cobW C-terminal domain DJ48_2236 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJ48_2237 PF00248 Aldo/keto reductase family DJ48_2239 PF01593 Flavin containing amine oxidoreductase DJ48_2241 PF00296 Luciferase-like monooxygenase DJ48_2244 PF00210 Ferritin-like domain DJ48_2248 PF02743 Cache domain DJ48_2248 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ48_2248 PF00672 HAMP domain DJ48_2249 PF03193 RsgA GTPase DJ48_225 PF13638 PIN domain DJ48_225 PF02562 PhoH-like protein DJ48_2253 PF07690 Major Facilitator Superfamily DJ48_2254 PF00248 Aldo/keto reductase family DJ48_2255 PF01022 Bacterial regulatory protein, arsR family DJ48_2256 PF00082 Subtilase family DJ48_2257 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DJ48_2257 PF18277 AbrB C-terminal domain DJ48_2258 PF02687 FtsX-like permease family DJ48_2259 PF02540 NAD synthase DJ48_2260 PF00293 NUDIX domain DJ48_2260 PF13344 Haloacid dehalogenase-like hydrolase DJ48_2265 PF01734 Patatin-like phospholipase DJ48_2267 PF01810 LysE type translocator DJ48_2268 PF07690 Major Facilitator Superfamily DJ48_2269 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ48_227 PF07408 Protein of unknown function (DUF1507) DJ48_2270 PF01261 Xylose isomerase-like TIM barrel DJ48_2273 PF00501 AMP-binding enzyme DJ48_2273 PF13193 AMP-binding enzyme C-terminal domain DJ48_2274 PF06276 Ferric iron reductase FhuF-like transporter DJ48_2274 PF04183 IucA / IucC family DJ48_2275 PF06276 Ferric iron reductase FhuF-like transporter DJ48_2275 PF04183 IucA / IucC family DJ48_2276 PF00583 Acetyltransferase (GNAT) family DJ48_2277 PF02308 MgtC family DJ48_2279 PF01522 Polysaccharide deacetylase DJ48_228 PF01098 Cell cycle protein DJ48_2280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_2280 PF16736 Single Cache-like DJ48_2280 PF00512 His Kinase A (phospho-acceptor) domain DJ48_2280 PF00989 PAS fold DJ48_2281 PF00072 Response regulator receiver domain DJ48_2281 PF00486 Transcriptional regulatory protein, C terminal DJ48_2283 PF03816 Cell envelope-related transcriptional attenuator domain DJ48_2286 PF08544 GHMP kinases C terminal DJ48_2286 PF00288 GHMP kinases N terminal domain DJ48_2287 PF00291 Pyridoxal-phosphate dependent enzyme DJ48_2288 PF01842 ACT domain DJ48_2288 PF00742 Homoserine dehydrogenase DJ48_2288 PF03447 Homoserine dehydrogenase, NAD binding domain DJ48_229 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ48_229 PF00364 Biotin-requiring enzyme DJ48_229 PF02785 Biotin carboxylase C-terminal domain DJ48_229 PF00289 Biotin carboxylase, N-terminal domain DJ48_229 PF00682 HMGL-like DJ48_229 PF02436 Conserved carboxylase domain DJ48_2292 PF01522 Polysaccharide deacetylase DJ48_2292 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DJ48_2293 PF04439 Streptomycin adenylyltransferase DJ48_2294 PF00106 short chain dehydrogenase DJ48_2296 PF16736 Single Cache-like DJ48_2296 PF00989 PAS fold DJ48_2296 PF00512 His Kinase A (phospho-acceptor) domain DJ48_2296 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_2297 PF00072 Response regulator receiver domain DJ48_2297 PF00486 Transcriptional regulatory protein, C terminal DJ48_2298 PF00664 ABC transporter transmembrane region DJ48_2298 PF00005 ABC transporter DJ48_23 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ48_230 PF02628 Cytochrome oxidase assembly protein DJ48_2300 PF00877 NlpC/P60 family DJ48_2300 PF01476 LysM domain DJ48_2302 PF07943 Penicillin-binding protein 5, C-terminal domain DJ48_2302 PF00768 D-alanyl-D-alanine carboxypeptidase DJ48_2303 PF02016 LD-carboxypeptidase N-terminal domain DJ48_2303 PF17676 LD-carboxypeptidase C-terminal domain DJ48_2306 PF00005 ABC transporter DJ48_2306 PF00664 ABC transporter transmembrane region DJ48_2307 PF00664 ABC transporter transmembrane region DJ48_2307 PF00005 ABC transporter DJ48_2308 PF02322 Cytochrome bd terminal oxidase subunit II DJ48_2309 PF01654 Cytochrome bd terminal oxidase subunit I DJ48_231 PF01040 UbiA prenyltransferase family DJ48_2311 PF01047 MarR family DJ48_2315 PF03466 LysR substrate binding domain DJ48_2315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ48_2317 PF02653 Branched-chain amino acid transport system / permease component DJ48_2318 PF00005 ABC transporter DJ48_2319 PF12399 Branched-chain amino acid ATP-binding cassette transporter DJ48_2319 PF00005 ABC transporter DJ48_232 PF00034 Cytochrome c DJ48_232 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DJ48_232 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DJ48_2321 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJ48_2321 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJ48_2322 PF01575 MaoC like domain DJ48_2323 PF00501 AMP-binding enzyme DJ48_2323 PF13193 AMP-binding enzyme C-terminal domain DJ48_2326 PF07683 Cobalamin synthesis protein cobW C-terminal domain DJ48_2326 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJ48_2327 PF01593 Flavin containing amine oxidoreductase DJ48_2328 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DJ48_2328 PF00056 lactate/malate dehydrogenase, NAD binding domain DJ48_2329 PF01594 AI-2E family transporter DJ48_233 PF00115 Cytochrome C and Quinol oxidase polypeptide I DJ48_2330 PF01425 Amidase DJ48_2333 PF00881 Nitroreductase family DJ48_2334 PF01323 DSBA-like thioredoxin domain DJ48_2335 PF02082 Transcriptional regulator DJ48_2336 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ48_2336 PF03466 LysR substrate binding domain DJ48_2337 PF00892 EamA-like transporter family DJ48_2339 PF07987 Domain of unkown function (DUF1775) DJ48_234 PF00510 Cytochrome c oxidase subunit III DJ48_2340 PF13115 YtkA-like DJ48_2340 PF05425 Copper resistance protein D DJ48_2340 PF04234 CopC domain DJ48_2342 PF05525 Branched-chain amino acid transport protein DJ48_2343 PF02525 Flavodoxin-like fold DJ48_2348 PF01551 Peptidase family M23 DJ48_2349 PF07732 Multicopper oxidase DJ48_2349 PF07731 Multicopper oxidase DJ48_235 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DJ48_2350 PF00557 Metallopeptidase family M24 DJ48_2350 PF05195 Aminopeptidase P, N-terminal domain DJ48_2354 PF05979 Bacterial protein of unknown function (DUF896) DJ48_2355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ48_2356 PF02885 Glycosyl transferase family, helical bundle domain DJ48_2356 PF00591 Glycosyl transferase family, a/b domain DJ48_2356 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DJ48_2357 PF01773 Na+ dependent nucleoside transporter N-terminus DJ48_2357 PF07662 Na+ dependent nucleoside transporter C-terminus DJ48_2358 PF01791 DeoC/LacD family aldolase DJ48_2359 PF04198 Putative sugar-binding domain DJ48_236 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DJ48_2361 PF05791 Bacillus haemolytic enterotoxin (HBL) DJ48_2362 PF05791 Bacillus haemolytic enterotoxin (HBL) DJ48_2364 PF13520 Amino acid permease DJ48_2365 PF13520 Amino acid permease DJ48_2367 PF02558 Ketopantoate reductase PanE/ApbA DJ48_2367 PF08546 Ketopantoate reductase PanE/ApbA C terminal DJ48_237 PF00795 Carbon-nitrogen hydrolase DJ48_2370 PF01566 Natural resistance-associated macrophage protein DJ48_2372 PF00512 His Kinase A (phospho-acceptor) domain DJ48_2372 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_2373 PF00486 Transcriptional regulatory protein, C terminal DJ48_2373 PF00072 Response regulator receiver domain DJ48_2374 PF13302 Acetyltransferase (GNAT) domain DJ48_2375 PF13186 Iron-sulfur cluster-binding domain DJ48_2375 PF04055 Radical SAM superfamily DJ48_2379 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_238 PF08868 YugN-like family DJ48_2380 PF12146 Serine aminopeptidase, S33 DJ48_2380 PF13026 Protein of unknown function (DUF3887) DJ48_2381 PF01979 Amidohydrolase family DJ48_2384 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DJ48_2384 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DJ48_2385 PF04397 LytTr DNA-binding domain DJ48_2385 PF00072 Response regulator receiver domain DJ48_2388 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DJ48_2389 PF07690 Major Facilitator Superfamily DJ48_239 PF00188 Cysteine-rich secretory protein family DJ48_239 PF14504 CAP-associated N-terminal DJ48_2392 PF09587 Bacterial capsule synthesis protein PGA_cap DJ48_2393 PF09587 Bacterial capsule synthesis protein PGA_cap DJ48_2395 PF00585 C-terminal regulatory domain of Threonine dehydratase DJ48_2395 PF00291 Pyridoxal-phosphate dependent enzyme DJ48_2396 PF00920 Dehydratase family DJ48_2397 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DJ48_2397 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DJ48_2398 PF10369 Small subunit of acetolactate synthase DJ48_2399 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ48_2399 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ48_2399 PF00205 Thiamine pyrophosphate enzyme, central domain DJ48_24 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_240 PF14071 Putative coat protein DJ48_2400 PF01063 Amino-transferase class IV DJ48_2402 PF01625 Peptide methionine sulfoxide reductase DJ48_2406 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJ48_2406 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ48_2409 PF04239 Protein of unknown function (DUF421) DJ48_241 PF14003 YlbE-like protein DJ48_2411 PF03422 Carbohydrate binding module (family 6) DJ48_2411 PF01522 Polysaccharide deacetylase DJ48_2411 PF00457 Glycosyl hydrolases family 11 DJ48_2412 PF00209 Sodium:neurotransmitter symporter family DJ48_2413 PF01943 Polysaccharide biosynthesis protein DJ48_2413 PF14667 Polysaccharide biosynthesis C-terminal domain DJ48_2416 PF00291 Pyridoxal-phosphate dependent enzyme DJ48_2417 PF07690 Major Facilitator Superfamily DJ48_2418 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_2419 PF16360 GTP-binding GTPase Middle Region DJ48_2419 PF13167 GTP-binding GTPase N-terminal DJ48_2419 PF01926 50S ribosome-binding GTPase DJ48_242 PF00300 Histidine phosphatase superfamily (branch 1) DJ48_2421 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJ48_2421 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJ48_2422 PF07690 Major Facilitator Superfamily DJ48_2423 PF03976 Polyphosphate kinase 2 (PPK2) DJ48_2424 PF02554 Carbon starvation protein CstA DJ48_2427 PF07690 Major Facilitator Superfamily DJ48_2429 PF13205 Bacterial Ig-like domain DJ48_2429 PF00395 S-layer homology domain DJ48_2429 PF02368 Bacterial Ig-like domain (group 2) DJ48_243 PF06133 Control of competence regulator ComK, YlbF/YmcA DJ48_2430 PF00293 NUDIX domain DJ48_2431 PF14158 YndJ-like protein DJ48_2432 PF13761 Domain of unknown function (DUF4166) DJ48_2434 PF00696 Amino acid kinase family DJ48_2434 PF13840 ACT domain DJ48_2438 PF03590 Aspartate-ammonia ligase DJ48_244 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DJ48_2440 PF00271 Helicase conserved C-terminal domain DJ48_2440 PF00176 SNF2 family N-terminal domain DJ48_2440 PF04434 SWIM zinc finger DJ48_2441 PF08664 YcbB domain DJ48_2441 PF00072 Response regulator receiver domain DJ48_2442 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_2443 PF00390 Malic enzyme, N-terminal domain DJ48_2443 PF03949 Malic enzyme, NAD binding domain DJ48_2444 PF00206 Lyase DJ48_2444 PF10415 Fumarase C C-terminus DJ48_2445 PF00375 Sodium:dicarboxylate symporter family DJ48_2446 PF00696 Amino acid kinase family DJ48_2447 PF13091 PLD-like domain DJ48_2450 PF00005 ABC transporter DJ48_2451 PF13492 GAF domain DJ48_2451 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_2451 PF07730 Histidine kinase DJ48_2451 PF13185 GAF domain DJ48_2456 PF04286 Protein of unknown function (DUF445) DJ48_2457 PF00291 Pyridoxal-phosphate dependent enzyme DJ48_2462 PF00578 AhpC/TSA family DJ48_2463 PF02683 Cytochrome C biogenesis protein transmembrane region DJ48_2467 PF03575 Peptidase family S51 DJ48_2468 PF01554 MatE DJ48_247 PF07670 Nucleoside recognition DJ48_2472 PF00206 Lyase DJ48_2472 PF10415 Fumarase C C-terminus DJ48_2473 PF00206 Lyase DJ48_2473 PF10415 Fumarase C C-terminus DJ48_2474 PF03553 Na+/H+ antiporter family DJ48_2475 PF00535 Glycosyl transferase family 2 DJ48_2477 PF03773 Predicted permease DJ48_2478 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJ48_2478 PF07683 Cobalamin synthesis protein cobW C-terminal domain DJ48_2479 PF00892 EamA-like transporter family DJ48_248 PF01467 Cytidylyltransferase-like DJ48_2480 PF07729 FCD domain DJ48_2480 PF00392 Bacterial regulatory proteins, gntR family DJ48_2482 PF01545 Cation efflux family DJ48_2482 PF16916 Dimerisation domain of Zinc Transporter DJ48_2486 PF00733 Asparagine synthase DJ48_2486 PF13537 Glutamine amidotransferase domain DJ48_2488 PF01047 MarR family DJ48_249 PF01734 Patatin-like phospholipase DJ48_2492 PF00300 Histidine phosphatase superfamily (branch 1) DJ48_2494 PF00768 D-alanyl-D-alanine carboxypeptidase DJ48_2494 PF07943 Penicillin-binding protein 5, C-terminal domain DJ48_2497 PF10787 Uncharacterised protein from bacillus cereus group DJ48_2499 PF00753 Metallo-beta-lactamase superfamily DJ48_2499 PF12706 Beta-lactamase superfamily domain DJ48_25 PF00005 ABC transporter DJ48_250 PF05362 Lon protease (S16) C-terminal proteolytic domain DJ48_250 PF13180 PDZ domain DJ48_2500 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_2502 PF00005 ABC transporter DJ48_2502 PF08402 TOBE domain DJ48_2508 PF08141 Small acid-soluble spore protein H family DJ48_2509 PF03992 Antibiotic biosynthesis monooxygenase DJ48_251 PF05636 HIGH Nucleotidyl Transferase DJ48_2512 PF17329 Family of unknown function (DUF5367) DJ48_2513 PF00440 Bacterial regulatory proteins, tetR family DJ48_2513 PF17932 Tetracyclin repressor-like, C-terminal domain DJ48_2518 PF02272 DHHA1 domain DJ48_2518 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ48_2518 PF01411 tRNA synthetases class II (A) DJ48_2519 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJ48_2519 PF00460 Flagella basal body rod protein DJ48_252 PF14659 Phage integrase, N-terminal SAM-like domain DJ48_252 PF00589 Phage integrase family DJ48_2520 PF00448 SRP54-type protein, GTPase domain DJ48_2521 PF00771 FHIPEP family DJ48_2522 PF01312 FlhB HrpN YscU SpaS Family DJ48_2524 PF01313 Bacterial export proteins, family 3 DJ48_2525 PF00813 FliP family DJ48_2527 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DJ48_2527 PF04509 CheC-like family DJ48_2528 PF02154 Flagellar motor switch protein FliM DJ48_2528 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DJ48_2529 PF01464 Transglycosylase SLT domain DJ48_2531 PF00669 Bacterial flagellin N-terminal helical region DJ48_2531 PF00700 Bacterial flagellin C-terminal helical region DJ48_2536 PF00535 Glycosyl transferase family 2 DJ48_2536 PF13181 Tetratricopeptide repeat DJ48_2542 PF00535 Glycosyl transferase family 2 DJ48_2543 PF12181 DNA binding domain of the motility gene repressor (MogR) DJ48_2544 PF00072 Response regulator receiver domain DJ48_2544 PF01584 CheW-like domain DJ48_2547 PF00460 Flagella basal body rod protein DJ48_2547 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJ48_2547 PF07559 Flagellar basal body protein FlaE DJ48_2551 PF02874 ATP synthase alpha/beta family, beta-barrel domain DJ48_2551 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJ48_2551 PF18269 T3SS EscN ATPase C-terminal domain DJ48_2553 PF14842 FliG N-terminal domain DJ48_2553 PF14841 FliG middle domain DJ48_2553 PF01706 FliG C-terminal domain DJ48_2554 PF08345 Flagellar M-ring protein C-terminal DJ48_2554 PF01514 Secretory protein of YscJ/FliF family DJ48_2555 PF02049 Flagellar hook-basal body complex protein FliE DJ48_2556 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJ48_2556 PF00460 Flagella basal body rod protein DJ48_2557 PF00460 Flagella basal body rod protein DJ48_256 PF01381 Helix-turn-helix DJ48_2561 PF00669 Bacterial flagellin N-terminal helical region DJ48_2561 PF00700 Bacterial flagellin C-terminal helical region DJ48_2562 PF00460 Flagella basal body rod protein DJ48_2562 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJ48_2566 PF01739 CheR methyltransferase, SAM binding domain DJ48_2566 PF03705 CheR methyltransferase, all-alpha domain DJ48_2569 PF04509 CheC-like family DJ48_2569 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DJ48_2570 PF02895 Signal transducing histidine kinase, homodimeric domain DJ48_2570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_2570 PF07194 P2 response regulator binding domain DJ48_2570 PF01584 CheW-like domain DJ48_2570 PF01627 Hpt domain DJ48_2571 PF00072 Response regulator receiver domain DJ48_2572 PF00691 OmpA family DJ48_2572 PF13677 Membrane MotB of proton-channel complex MotA/MotB DJ48_2573 PF01618 MotA/TolQ/ExbB proton channel family DJ48_2575 PF17209 Hfq protein DJ48_2585 PF00881 Nitroreductase family DJ48_2587 PF02698 DUF218 domain DJ48_2588 PF04239 Protein of unknown function (DUF421) DJ48_259 PF01381 Helix-turn-helix DJ48_2590 PF13411 MerR HTH family regulatory protein DJ48_2590 PF06445 GyrI-like small molecule binding domain DJ48_2591 PF17770 Ribonuclease J C-terminal domain DJ48_2591 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DJ48_2591 PF00753 Metallo-beta-lactamase superfamily DJ48_2592 PF00999 Sodium/hydrogen exchanger family DJ48_2594 PF00202 Aminotransferase class-III DJ48_2595 PF00474 Sodium:solute symporter family DJ48_2596 PF04341 Protein of unknown function, DUF485 DJ48_2599 PF01810 LysE type translocator DJ48_26 PF06081 Aromatic acid exporter family member 1 DJ48_26 PF11728 Putative aromatic acid exporter C-terminal domain DJ48_2601 PF00313 'Cold-shock' DNA-binding domain DJ48_2606 PF01263 Aldose 1-epimerase DJ48_2607 PF13456 Reverse transcriptase-like DJ48_2611 PF13673 Acetyltransferase (GNAT) domain DJ48_2611 PF18014 Acetyltransferase (GNAT) domain DJ48_2614 PF13439 Glycosyltransferase Family 4 DJ48_2614 PF00534 Glycosyl transferases group 1 DJ48_2615 PF00535 Glycosyl transferase family 2 DJ48_2618 PF02397 Bacterial sugar transferase DJ48_2622 PF01367 5'-3' exonuclease, C-terminal SAM fold DJ48_2622 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DJ48_2623 PF00690 Cation transporter/ATPase, N-terminus DJ48_2623 PF00689 Cation transporting ATPase, C-terminus DJ48_2625 PF03738 Glutathionylspermidine synthase preATP-grasp DJ48_2628 PF00581 Rhodanese-like domain DJ48_2629 PF10752 Protein of unknown function (DUF2533) DJ48_2630 PF00583 Acetyltransferase (GNAT) family DJ48_2632 PF00350 Dynamin family DJ48_2634 PF04235 Protein of unknown function (DUF418) DJ48_2635 PF00860 Permease family DJ48_2636 PF00156 Phosphoribosyl transferase domain DJ48_2637 PF00557 Metallopeptidase family M24 DJ48_2638 PF01636 Phosphotransferase enzyme family DJ48_2640 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DJ48_2641 PF13307 Helicase C-terminal domain DJ48_2643 PF01170 Putative RNA methylase family UPF0020 DJ48_2643 PF02926 THUMP domain DJ48_2644 PF05103 DivIVA protein DJ48_2645 PF06908 YspA SLOG family DJ48_265 PF01695 IstB-like ATP binding protein DJ48_265 PF07319 Primosomal protein DnaI N-terminus DJ48_2652 PF10720 Protein of unknown function (DUF2515) DJ48_2653 PF03838 Recombination protein U DJ48_2654 PF00905 Penicillin binding protein transpeptidase domain DJ48_2654 PF00912 Transglycosylase DJ48_2656 PF00730 HhH-GPD superfamily base excision DNA repair protein DJ48_2656 PF00633 Helix-hairpin-helix motif DJ48_2656 PF10576 Iron-sulfur binding domain of endonuclease III DJ48_2657 PF07261 Replication initiation and membrane attachment DJ48_2658 PF00155 Aminotransferase class I and II DJ48_2660 PF14084 Protein of unknown function (DUF4264) DJ48_2661 PF04851 Type III restriction enzyme, res subunit DJ48_2661 PF13307 Helicase C-terminal domain DJ48_2661 PF00929 Exonuclease DJ48_2662 PF02261 Aspartate decarboxylase DJ48_2663 PF02569 Pantoate-beta-alanine ligase DJ48_2664 PF02548 Ketopantoate hydroxymethyltransferase DJ48_2666 PF08279 HTH domain DJ48_2666 PF03099 Biotin/lipoate A/B protein ligase family DJ48_2666 PF02237 Biotin protein ligase C terminal domain DJ48_2667 PF01743 Poly A polymerase head domain DJ48_2667 PF12627 Probable RNA and SrmB- binding site of polymerase A DJ48_2667 PF13735 tRNA nucleotidyltransferase domain 2 putative DJ48_2668 PF00534 Glycosyl transferases group 1 DJ48_2668 PF13439 Glycosyltransferase Family 4 DJ48_2669 PF02585 GlcNAc-PI de-N-acetylase DJ48_2670 PF02142 MGS-like domain DJ48_2671 PF01113 Dihydrodipicolinate reductase, N-terminus DJ48_2671 PF05173 Dihydrodipicolinate reductase, C-terminus DJ48_2672 PF03819 MazG nucleotide pyrophosphohydrolase domain DJ48_2673 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ48_2673 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ48_2675 PF04298 Putative neutral zinc metallopeptidase DJ48_2676 PF09577 Sporulation protein YpjB (SpoYpjB) DJ48_2678 PF07187 Protein of unknown function (DUF1405) DJ48_2679 PF00032 Cytochrome b(C-terminal)/b6/petD DJ48_2679 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DJ48_2680 PF00033 Cytochrome b/b6/petB DJ48_2681 PF00355 Rieske [2Fe-2S] domain DJ48_2682 PF10673 Protein of unknown function (DUF2487) DJ48_2683 PF08864 UPF0302 domain DJ48_2683 PF08858 IDEAL domain DJ48_2685 PF00155 Aminotransferase class I and II DJ48_2686 PF01761 3-dehydroquinate synthase DJ48_2687 PF01264 Chorismate synthase DJ48_2688 PF00334 Nucleoside diphosphate kinase DJ48_2689 PF00348 Polyprenyl synthetase DJ48_2690 PF01209 ubiE/COQ5 methyltransferase family DJ48_2691 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 DJ48_2692 PF01227 GTP cyclohydrolase I DJ48_2693 PF00216 Bacterial DNA-binding protein DJ48_2694 PF09547 Stage IV sporulation protein A (spore_IV_A) DJ48_2696 PF10966 Protein of unknown function (DUF2768) DJ48_2698 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DJ48_2698 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DJ48_2699 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DJ48_2699 PF01926 50S ribosome-binding GTPase DJ48_27 PF03734 L,D-transpeptidase catalytic domain DJ48_270 PF04542 Sigma-70 region 2 DJ48_270 PF04539 Sigma-70 region 3 DJ48_270 PF04545 Sigma-70, region 4 DJ48_2701 PF14045 YIEGIA protein DJ48_2703 PF14140 YpzI-like protein DJ48_2704 PF01070 FMN-dependent dehydrogenase DJ48_2705 PF00575 S1 RNA binding domain DJ48_2706 PF02224 Cytidylate kinase DJ48_2708 PF17763 Glutaminase/Asparaginase C-terminal domain DJ48_2708 PF00710 Asparaginase, N-terminal DJ48_2713 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ48_2713 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DJ48_2714 PF05389 Negative regulator of genetic competence (MecA) DJ48_2715 PF02607 B12 binding domain DJ48_2715 PF13411 MerR HTH family regulatory protein DJ48_2715 PF02310 B12 binding domain DJ48_2716 PF00149 Calcineurin-like phosphoesterase DJ48_2718 PF02517 CPBP intramembrane metalloprotease DJ48_2719 PF00270 DEAD/DEAH box helicase DJ48_2719 PF00271 Helicase conserved C-terminal domain DJ48_2722 PF12822 ECF transporter, substrate-specific component DJ48_2725 PF01923 Cobalamin adenosyltransferase DJ48_2726 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_2726 PF00672 HAMP domain DJ48_2726 PF00512 His Kinase A (phospho-acceptor) domain DJ48_2726 PF18698 Histidine kinase sensor domain DJ48_2726 PF00989 PAS fold DJ48_2727 PF00072 Response regulator receiver domain DJ48_2727 PF00486 Transcriptional regulatory protein, C terminal DJ48_2728 PF01578 Cytochrome C assembly protein DJ48_2729 PF05140 ResB-like family DJ48_2730 PF00578 AhpC/TSA family DJ48_2731 PF01479 S4 domain DJ48_2731 PF00849 RNA pseudouridylate synthase DJ48_2732 PF07670 Nucleoside recognition DJ48_2733 PF07670 Nucleoside recognition DJ48_2734 PF07943 Penicillin-binding protein 5, C-terminal domain DJ48_2734 PF00768 D-alanyl-D-alanine carboxypeptidase DJ48_2735 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DJ48_2735 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DJ48_2738 PF09924 Uncharacterised conserved protein (DUF2156) DJ48_2738 PF03706 Lysylphosphatidylglycerol synthase TM region DJ48_2741 PF01048 Phosphorylase superfamily DJ48_2742 PF16736 Single Cache-like DJ48_2742 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_2742 PF00989 PAS fold DJ48_2742 PF00512 His Kinase A (phospho-acceptor) domain DJ48_2743 PF00589 Phage integrase family DJ48_2745 PF01904 Protein of unknown function DUF72 DJ48_2746 PF00989 PAS fold DJ48_2746 PF00512 His Kinase A (phospho-acceptor) domain DJ48_2746 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_2749 PF00912 Transglycosylase DJ48_2749 PF00905 Penicillin binding protein transpeptidase domain DJ48_275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_2750 PF01865 Protein of unknown function DUF47 DJ48_2751 PF01384 Phosphate transporter family DJ48_2752 PF01384 Phosphate transporter family DJ48_2753 PF01925 Sulfite exporter TauE/SafE DJ48_2756 PF00042 Globin DJ48_2756 PF00970 Oxidoreductase FAD-binding domain DJ48_2756 PF00175 Oxidoreductase NAD-binding domain DJ48_2761 PF08241 Methyltransferase domain DJ48_2763 PF05525 Branched-chain amino acid transport protein DJ48_2765 PF00196 Bacterial regulatory proteins, luxR family DJ48_2765 PF00072 Response regulator receiver domain DJ48_2766 PF07730 Histidine kinase DJ48_2766 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_2766 PF00672 HAMP domain DJ48_2767 PF09922 Cell wall-active antibiotics response 4TMS YvqF DJ48_2770 PF03553 Na+/H+ antiporter family DJ48_2772 PF00375 Sodium:dicarboxylate symporter family DJ48_2774 PF00209 Sodium:neurotransmitter symporter family DJ48_2776 PF01903 CbiX DJ48_2777 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ48_2779 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DJ48_2779 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DJ48_2781 PF01747 ATP-sulfurylase DJ48_2781 PF14306 PUA-like domain DJ48_2782 PF01507 Phosphoadenosine phosphosulfate reductase family DJ48_2784 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DJ48_2784 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DJ48_2786 PF00884 Sulfatase DJ48_2787 PF01066 CDP-alcohol phosphatidyltransferase DJ48_2788 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ48_2788 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ48_2790 PF02811 PHP domain DJ48_2791 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DJ48_2792 PF01502 Phosphoribosyl-AMP cyclohydrolase DJ48_2793 PF00977 Histidine biosynthesis protein DJ48_2794 PF00977 Histidine biosynthesis protein DJ48_2795 PF00117 Glutamine amidotransferase class-I DJ48_2796 PF00475 Imidazoleglycerol-phosphate dehydratase DJ48_2797 PF00815 Histidinol dehydrogenase DJ48_2798 PF01634 ATP phosphoribosyltransferase DJ48_2799 PF13393 Histidyl-tRNA synthetase DJ48_2800 PF00694 Aconitase C-terminal domain DJ48_2801 PF00330 Aconitase family (aconitate hydratase) DJ48_2802 PF00180 Isocitrate/isopropylmalate dehydrogenase DJ48_2803 PF08502 LeuA allosteric (dimerisation) domain DJ48_2803 PF00682 HMGL-like DJ48_2804 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DJ48_2804 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DJ48_2805 PF01842 ACT domain DJ48_2805 PF10369 Small subunit of acetolactate synthase DJ48_2806 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ48_2806 PF00205 Thiamine pyrophosphate enzyme, central domain DJ48_2806 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ48_2807 PF01063 Amino-transferase class IV DJ48_2810 PF03698 Uncharacterised protein family (UPF0180) DJ48_2812 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DJ48_2814 PF02386 Cation transport protein DJ48_2815 PF00375 Sodium:dicarboxylate symporter family DJ48_2817 PF01047 MarR family DJ48_2820 PF02673 Bacitracin resistance protein BacA DJ48_2821 PF01554 MatE DJ48_2825 PF01636 Phosphotransferase enzyme family DJ48_2828 PF00258 Flavodoxin DJ48_2830 PF07687 Peptidase dimerisation domain DJ48_2830 PF01546 Peptidase family M20/M25/M40 DJ48_2832 PF00501 AMP-binding enzyme DJ48_2832 PF13193 AMP-binding enzyme C-terminal domain DJ48_2833 PF03062 MBOAT, membrane-bound O-acyltransferase family DJ48_2834 PF00550 Phosphopantetheine attachment site DJ48_2835 PF04914 DltD protein DJ48_2836 PF04914 DltD protein DJ48_2837 PF03060 Nitronate monooxygenase DJ48_2838 PF02016 LD-carboxypeptidase N-terminal domain DJ48_2838 PF17676 LD-carboxypeptidase C-terminal domain DJ48_2840 PF00857 Isochorismatase family DJ48_2842 PF01037 Lrp/AsnC ligand binding domain DJ48_2846 PF00005 ABC transporter DJ48_2848 PF00005 ABC transporter DJ48_2849 PF00392 Bacterial regulatory proteins, gntR family DJ48_285 PF00589 Phage integrase family DJ48_2850 PF00268 Ribonucleotide reductase, small chain DJ48_2851 PF00317 Ribonucleotide reductase, all-alpha domain DJ48_2851 PF02867 Ribonucleotide reductase, barrel domain DJ48_2851 PF08343 Ribonucleotide reductase N-terminal DJ48_2853 PF08343 Ribonucleotide reductase N-terminal DJ48_2853 PF02867 Ribonucleotide reductase, barrel domain DJ48_2853 PF00317 Ribonucleotide reductase, all-alpha domain DJ48_2854 PF07972 NrdI Flavodoxin like DJ48_286 PF10137 Predicted nucleotide-binding protein containing TIR-like domain DJ48_2860 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) DJ48_2861 PF14489 QueF-like protein DJ48_2862 PF04055 Radical SAM superfamily DJ48_2863 PF01242 6-pyruvoyl tetrahydropterin synthase DJ48_2864 PF06508 Queuosine biosynthesis protein QueC DJ48_2865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_2865 PF00512 His Kinase A (phospho-acceptor) domain DJ48_2866 PF13188 PAS domain DJ48_2866 PF00989 PAS fold DJ48_2866 PF13426 PAS domain DJ48_2866 PF00512 His Kinase A (phospho-acceptor) domain DJ48_2866 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_2868 PF12867 DinB superfamily DJ48_2870 PF01047 MarR family DJ48_2871 PF02743 Cache domain DJ48_2871 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_2871 PF00512 His Kinase A (phospho-acceptor) domain DJ48_2872 PF09388 Spo0E like sporulation regulatory protein DJ48_2873 PF04748 Divergent polysaccharide deacetylase DJ48_2875 PF00596 Class II Aldolase and Adducin N-terminal domain DJ48_2876 PF00395 S-layer homology domain DJ48_2876 PF01520 N-acetylmuramoyl-L-alanine amidase DJ48_2879 PF00455 DeoR C terminal sensor domain DJ48_2879 PF08220 DeoR-like helix-turn-helix domain DJ48_2881 PF00266 Aminotransferase class-V DJ48_2882 PF13419 Haloacid dehalogenase-like hydrolase DJ48_2883 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_2885 PF00005 ABC transporter DJ48_2886 PF00005 ABC transporter DJ48_2886 PF08402 TOBE domain DJ48_2891 PF02386 Cation transport protein DJ48_2893 PF00561 alpha/beta hydrolase fold DJ48_2898 PF01575 MaoC like domain DJ48_2899 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ48_29 PF13302 Acetyltransferase (GNAT) domain DJ48_290 PF03354 Phage Terminase DJ48_2900 PF02386 Cation transport protein DJ48_2901 PF03741 Integral membrane protein TerC family DJ48_2902 PF01226 Formate/nitrite transporter DJ48_2904 PF06750 Bacterial Peptidase A24 N-terminal domain DJ48_2904 PF01478 Type IV leader peptidase family DJ48_2905 PF02589 LUD domain DJ48_2906 PF02589 LUD domain DJ48_2906 PF13183 4Fe-4S dicluster domain DJ48_2906 PF11870 Domain of unknown function (DUF3390) DJ48_2907 PF02754 Cysteine-rich domain DJ48_2908 PF00392 Bacterial regulatory proteins, gntR family DJ48_2908 PF07729 FCD domain DJ48_2909 PF18698 Histidine kinase sensor domain DJ48_2909 PF00672 HAMP domain DJ48_2909 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_2909 PF00989 PAS fold DJ48_2909 PF00512 His Kinase A (phospho-acceptor) domain DJ48_2910 PF00072 Response regulator receiver domain DJ48_2910 PF00486 Transcriptional regulatory protein, C terminal DJ48_2912 PF13556 PucR C-terminal helix-turn-helix domain DJ48_2912 PF17853 GGDEF-like domain DJ48_2912 PF05651 Putative sugar diacid recognition DJ48_2913 PF02913 FAD linked oxidases, C-terminal domain DJ48_2913 PF01565 FAD binding domain DJ48_2914 PF02754 Cysteine-rich domain DJ48_2914 PF13183 4Fe-4S dicluster domain DJ48_2915 PF00188 Cysteine-rich secretory protein family DJ48_2917 PF00849 RNA pseudouridylate synthase DJ48_2917 PF01479 S4 domain DJ48_2919 PF03176 MMPL family DJ48_292 PF00574 Clp protease DJ48_2921 PF13416 Bacterial extracellular solute-binding protein DJ48_2922 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_2923 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_2924 PF08402 TOBE domain DJ48_2924 PF00005 ABC transporter DJ48_2925 PF00171 Aldehyde dehydrogenase family DJ48_2926 PF05547 Immune inhibitor A peptidase M6 DJ48_2928 PF08671 Anti-repressor SinI DJ48_2928 PF01381 Helix-turn-helix DJ48_2929 PF12389 Camelysin metallo-endopeptidase DJ48_2931 PF12389 Camelysin metallo-endopeptidase DJ48_2933 PF07943 Penicillin-binding protein 5, C-terminal domain DJ48_2933 PF00768 D-alanyl-D-alanine carboxypeptidase DJ48_2935 PF13649 Methyltransferase domain DJ48_2946 PF01381 Helix-turn-helix DJ48_2947 PF16870 2-oxoglutarate dehydrogenase C-terminal DJ48_2947 PF02779 Transketolase, pyrimidine binding domain DJ48_2947 PF00676 Dehydrogenase E1 component DJ48_2948 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DJ48_2948 PF00364 Biotin-requiring enzyme DJ48_2948 PF02817 e3 binding domain DJ48_2954 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_2954 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ48_2958 PF10042 Uncharacterized conserved protein (DUF2278) DJ48_2959 PF02652 L-lactate permease DJ48_2961 PF00290 Tryptophan synthase alpha chain DJ48_2962 PF00291 Pyridoxal-phosphate dependent enzyme DJ48_2963 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DJ48_2964 PF00218 Indole-3-glycerol phosphate synthase DJ48_2965 PF02885 Glycosyl transferase family, helical bundle domain DJ48_2965 PF00591 Glycosyl transferase family, a/b domain DJ48_2966 PF00591 Glycosyl transferase family, a/b domain DJ48_2966 PF00117 Glutamine amidotransferase class-I DJ48_2966 PF02885 Glycosyl transferase family, helical bundle domain DJ48_2969 PF00474 Sodium:solute symporter family DJ48_2970 PF02368 Bacterial Ig-like domain (group 2) DJ48_2973 PF00756 Putative esterase DJ48_2975 PF13673 Acetyltransferase (GNAT) domain DJ48_2976 PF13361 UvrD-like helicase C-terminal domain DJ48_2976 PF00580 UvrD/REP helicase N-terminal domain DJ48_2979 PF07098 Protein of unknown function (DUF1360) DJ48_2983 PF04321 RmlD substrate binding domain DJ48_2984 PF16363 GDP-mannose 4,6 dehydratase DJ48_2985 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DJ48_2986 PF00483 Nucleotidyl transferase DJ48_2991 PF00535 Glycosyl transferase family 2 DJ48_2991 PF13181 Tetratricopeptide repeat DJ48_2993 PF05711 Macrocin-O-methyltransferase (TylF) DJ48_2994 PF08241 Methyltransferase domain DJ48_2995 PF00535 Glycosyl transferase family 2 DJ48_2996 PF01098 Cell cycle protein DJ48_2997 PF00149 Calcineurin-like phosphoesterase DJ48_2999 PF00849 RNA pseudouridylate synthase DJ48_3 PF02863 Arginine repressor, C-terminal domain DJ48_3 PF01316 Arginine repressor, DNA binding domain DJ48_30 PF01546 Peptidase family M20/M25/M40 DJ48_30 PF07687 Peptidase dimerisation domain DJ48_3000 PF01513 ATP-NAD kinase DJ48_3001 PF04607 Region found in RelA / SpoT proteins DJ48_3003 PF01928 CYTH domain DJ48_3004 PF01152 Bacterial-like globin DJ48_3007 PF01432 Peptidase family M3 DJ48_3007 PF08439 Oligopeptidase F DJ48_3008 PF08439 Oligopeptidase F DJ48_3008 PF01432 Peptidase family M3 DJ48_3010 PF13091 PLD-like domain DJ48_3010 PF13396 Phospholipase_D-nuclease N-terminal DJ48_3011 PF05389 Negative regulator of genetic competence (MecA) DJ48_3012 PF03741 Integral membrane protein TerC family DJ48_3013 PF03960 ArsC family DJ48_3015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_3016 PF01554 MatE DJ48_3017 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ48_3017 PF00005 ABC transporter DJ48_3018 PF00005 ABC transporter DJ48_3018 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ48_3019 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3019 PF12911 N-terminal TM domain of oligopeptide transport permease C DJ48_3020 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3021 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_3023 PF00579 tRNA synthetases class I (W and Y) DJ48_3024 PF12227 Protein of unknown function (DUF3603) DJ48_3025 PF10026 Predicted Zn-dependent protease (DUF2268) DJ48_3026 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ48_3026 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ48_3027 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJ48_3027 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJ48_3028 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJ48_3028 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJ48_3029 PF10815 ComZ DJ48_3033 PF02861 Clp amino terminal domain, pathogenicity island component DJ48_3033 PF00004 ATPase family associated with various cellular activities (AAA) DJ48_3033 PF17871 AAA lid domain DJ48_3033 PF10431 C-terminal, D2-small domain, of ClpB protein DJ48_3033 PF07724 AAA domain (Cdc48 subfamily) DJ48_3034 PF14168 YjzC-like protein DJ48_3037 PF12758 Protein of unknown function (DUF3813) DJ48_3038 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ48_3038 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ48_3040 PF00639 PPIC-type PPIASE domain DJ48_3042 PF17783 CvfB-like winged helix domain DJ48_3042 PF13509 S1 domain DJ48_3043 PF04461 Protein of unknown function (DUF520) DJ48_3045 PF00128 Alpha amylase, catalytic domain DJ48_3046 PF00909 Ammonium Transporter Family DJ48_3047 PF06628 Catalase-related immune-responsive DJ48_3047 PF00199 Catalase DJ48_3049 PF13537 Glutamine amidotransferase domain DJ48_3049 PF00733 Asparagine synthase DJ48_3051 PF07457 Protein of unknown function (DUF1516) DJ48_3052 PF00202 Aminotransferase class-III DJ48_3054 PF01557 Fumarylacetoacetate (FAA) hydrolase family DJ48_3055 PF09388 Spo0E like sporulation regulatory protein DJ48_3056 PF10676 Spore germination protein gerPA/gerPF DJ48_3057 PF10803 Spore germination GerPB DJ48_3058 PF10737 Spore germination protein GerPC DJ48_3060 PF10970 Spore germination protein GerPE DJ48_3061 PF10676 Spore germination protein gerPA/gerPF DJ48_3063 PF13361 UvrD-like helicase C-terminal domain DJ48_3063 PF12705 PD-(D/E)XK nuclease superfamily DJ48_3063 PF00580 UvrD/REP helicase N-terminal domain DJ48_3064 PF12705 PD-(D/E)XK nuclease superfamily DJ48_3064 PF13361 UvrD-like helicase C-terminal domain DJ48_3065 PF10502 Signal peptidase, peptidase S26 DJ48_3066 PF09335 SNARE associated Golgi protein DJ48_3067 PF06338 ComK protein DJ48_307 PF05105 Bacteriophage holin family DJ48_3070 PF00313 'Cold-shock' DNA-binding domain DJ48_3072 PF00463 Isocitrate lyase family DJ48_3073 PF01274 Malate synthase DJ48_3074 PF00395 S-layer homology domain DJ48_3076 PF00395 S-layer homology domain DJ48_3076 PF00150 Cellulase (glycosyl hydrolase family 5) DJ48_3076 PF03424 Carbohydrate binding domain (family 17/28) DJ48_3077 PF00892 EamA-like transporter family DJ48_3078 PF00672 HAMP domain DJ48_3078 PF02743 Cache domain DJ48_3078 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ48_3079 PF16491 CAAX prenyl protease N-terminal, five membrane helices DJ48_3079 PF01435 Peptidase family M48 DJ48_308 PF01510 N-acetylmuramoyl-L-alanine amidase DJ48_308 PF12123 N-acetylmuramoyl-l-alanine amidase DJ48_3084 PF00072 Response regulator receiver domain DJ48_3084 PF00486 Transcriptional regulatory protein, C terminal DJ48_3085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_3085 PF00512 His Kinase A (phospho-acceptor) domain DJ48_3087 PF06445 GyrI-like small molecule binding domain DJ48_3087 PF12833 Helix-turn-helix domain DJ48_3088 PF08281 Sigma-70, region 4 DJ48_3088 PF04542 Sigma-70 region 2 DJ48_3090 PF01966 HD domain DJ48_3091 PF00149 Calcineurin-like phosphoesterase DJ48_3092 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DJ48_3097 PF05593 RHS Repeat DJ48_3100 PF05593 RHS Repeat DJ48_3101 PF01520 N-acetylmuramoyl-L-alanine amidase DJ48_3101 PF00395 S-layer homology domain DJ48_3103 PF13193 AMP-binding enzyme C-terminal domain DJ48_3103 PF00501 AMP-binding enzyme DJ48_3105 PF03099 Biotin/lipoate A/B protein ligase family DJ48_3105 PF10437 Bacterial lipoate protein ligase C-terminus DJ48_3106 PF12706 Beta-lactamase superfamily domain DJ48_3107 PF14149 YhfH-like protein DJ48_3108 PF00356 Bacterial regulatory proteins, lacI family DJ48_3114 PF00440 Bacterial regulatory proteins, tetR family DJ48_3114 PF17932 Tetracyclin repressor-like, C-terminal domain DJ48_3116 PF03965 Penicillinase repressor DJ48_3123 PF01208 Uroporphyrinogen decarboxylase (URO-D) DJ48_3124 PF00905 Penicillin binding protein transpeptidase domain DJ48_3124 PF00912 Transglycosylase DJ48_3125 PF03992 Antibiotic biosynthesis monooxygenase DJ48_3126 PF03703 Bacterial PH domain DJ48_3128 PF03703 Bacterial PH domain DJ48_3136 PF03703 Bacterial PH domain DJ48_3137 PF03703 Bacterial PH domain DJ48_3139 PF17934 Tetracyclin repressor-like, C-terminal domain DJ48_3139 PF00440 Bacterial regulatory proteins, tetR family DJ48_3141 PF12787 EcsC protein family DJ48_3142 PF05975 Bacterial ABC transporter protein EcsB DJ48_3143 PF00005 ABC transporter DJ48_3144 PF01230 HIT domain DJ48_3145 PF12732 YtxH-like protein DJ48_3146 PF01047 MarR family DJ48_3150 PF13538 UvrD-like helicase C-terminal domain DJ48_3152 PF07690 Major Facilitator Superfamily DJ48_3153 PF07690 Major Facilitator Superfamily DJ48_3158 PF04542 Sigma-70 region 2 DJ48_3158 PF08281 Sigma-70, region 4 DJ48_3161 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DJ48_3161 PF01266 FAD dependent oxidoreductase DJ48_3162 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ48_3162 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ48_3163 PF00230 Major intrinsic protein DJ48_3164 PF04309 Glycerol-3-phosphate responsive antiterminator DJ48_3168 PF08386 TAP-like protein DJ48_3168 PF00561 alpha/beta hydrolase fold DJ48_317 PF02620 Large ribosomal RNA subunit accumulation protein YceD DJ48_3170 PF18801 response regulator aspartate phosphatase H, N terminal DJ48_3171 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_3172 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_3173 PF07690 Major Facilitator Superfamily DJ48_3174 PF00440 Bacterial regulatory proteins, tetR family DJ48_3175 PF01336 OB-fold nucleic acid binding domain DJ48_3175 PF01966 HD domain DJ48_3177 PF01385 Probable transposase DJ48_3177 PF07282 Putative transposase DNA-binding domain DJ48_3177 PF12323 Helix-turn-helix domain DJ48_3178 PF13514 AAA domain DJ48_3179 PF00149 Calcineurin-like phosphoesterase DJ48_318 PF01783 Ribosomal L32p protein family DJ48_3182 PF11121 Protein of unknown function (DUF2639) DJ48_3183 PF00107 Zinc-binding dehydrogenase DJ48_3183 PF08240 Alcohol dehydrogenase GroES-like domain DJ48_3185 PF01906 Putative heavy-metal-binding DJ48_3190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_3190 PF00072 Response regulator receiver domain DJ48_3190 PF01627 Hpt domain DJ48_3190 PF00512 His Kinase A (phospho-acceptor) domain DJ48_3190 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ48_3191 PF01739 CheR methyltransferase, SAM binding domain DJ48_3191 PF03705 CheR methyltransferase, all-alpha domain DJ48_3192 PF07228 Stage II sporulation protein E (SpoIIE) DJ48_3192 PF13426 PAS domain DJ48_3194 PF04545 Sigma-70, region 4 DJ48_3194 PF04542 Sigma-70 region 2 DJ48_3194 PF04539 Sigma-70 region 3 DJ48_3195 PF13581 Histidine kinase-like ATPase domain DJ48_3196 PF01740 STAS domain DJ48_3199 PF05532 CsbD-like DJ48_32 PF00817 impB/mucB/samB family DJ48_32 PF11799 impB/mucB/samB family C-terminal domain DJ48_32 PF11798 IMS family HHH motif DJ48_320 PF00583 Acetyltransferase (GNAT) family DJ48_3200 PF11181 Heat induced stress protein YflT DJ48_3204 PF00395 S-layer homology domain DJ48_3209 PF00672 HAMP domain DJ48_3209 PF01966 HD domain DJ48_321 PF08546 Ketopantoate reductase PanE/ApbA C terminal DJ48_321 PF02558 Ketopantoate reductase PanE/ApbA DJ48_3214 PF02082 Transcriptional regulator DJ48_3215 PF02525 Flavodoxin-like fold DJ48_3216 PF02733 Dak1 domain DJ48_3218 PF02733 Dak1 domain DJ48_322 PF10079 Bacillithiol biosynthesis BshC DJ48_3222 PF01066 CDP-alcohol phosphatidyltransferase DJ48_3226 PF18665 Tetracyclin repressor-like, C-terminal domain DJ48_3226 PF00440 Bacterial regulatory proteins, tetR family DJ48_3227 PF07993 Male sterility protein DJ48_3227 PF00550 Phosphopantetheine attachment site DJ48_323 PF01795 MraW methylase family DJ48_3237 PF07690 Major Facilitator Superfamily DJ48_324 PF04977 Septum formation initiator DJ48_3240 PF01925 Sulfite exporter TauE/SafE DJ48_3245 PF03796 DnaB-like helicase C terminal domain DJ48_3245 PF00772 DnaB-like helicase N terminal domain DJ48_3248 PF06445 GyrI-like small molecule binding domain DJ48_3248 PF13411 MerR HTH family regulatory protein DJ48_3252 PF02342 TerD domain DJ48_3253 PF03401 Tripartite tricarboxylate transporter family receptor DJ48_3254 PF00072 Response regulator receiver domain DJ48_3254 PF08279 HTH domain DJ48_3254 PF12431 Transcriptional regulator DJ48_3255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_3255 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DJ48_3256 PF00083 Sugar (and other) transporter DJ48_326 PF03717 Penicillin-binding Protein dimerisation domain DJ48_326 PF03793 PASTA domain DJ48_326 PF00905 Penicillin binding protein transpeptidase domain DJ48_3262 PF00005 ABC transporter DJ48_3262 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ48_3263 PF00005 ABC transporter DJ48_3263 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ48_3264 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ48_3264 PF00005 ABC transporter DJ48_3265 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3265 PF12911 N-terminal TM domain of oligopeptide transport permease C DJ48_3266 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3267 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_327 PF08245 Mur ligase middle domain DJ48_327 PF02875 Mur ligase family, glutamate ligase domain DJ48_327 PF01225 Mur ligase family, catalytic domain DJ48_3271 PF18593 CdiI immunity protein DJ48_3272 PF02423 Ornithine cyclodeaminase/mu-crystallin family DJ48_3273 PF05544 Proline racemase DJ48_3274 PF11121 Protein of unknown function (DUF2639) DJ48_3276 PF01520 N-acetylmuramoyl-L-alanine amidase DJ48_3276 PF00395 S-layer homology domain DJ48_3277 PF05343 M42 glutamyl aminopeptidase DJ48_328 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DJ48_328 PF00953 Glycosyl transferase family 4 DJ48_3281 PF00378 Enoyl-CoA hydratase/isomerase DJ48_3284 PF03062 MBOAT, membrane-bound O-acyltransferase family DJ48_3285 PF03062 MBOAT, membrane-bound O-acyltransferase family DJ48_3287 PF00395 S-layer homology domain DJ48_3288 PF02368 Bacterial Ig-like domain (group 2) DJ48_3288 PF13205 Bacterial Ig-like domain DJ48_3288 PF00395 S-layer homology domain DJ48_329 PF08245 Mur ligase middle domain DJ48_329 PF02875 Mur ligase family, glutamate ligase domain DJ48_3290 PF01943 Polysaccharide biosynthesis protein DJ48_3290 PF14667 Polysaccharide biosynthesis C-terminal domain DJ48_3291 PF01043 SecA preprotein cross-linking domain DJ48_3291 PF07516 SecA Wing and Scaffold domain DJ48_3291 PF07517 SecA DEAD-like domain DJ48_3295 PF01740 STAS domain DJ48_3295 PF00916 Sulfate permease family DJ48_3297 PF13193 AMP-binding enzyme C-terminal domain DJ48_3297 PF00501 AMP-binding enzyme DJ48_3298 PF04055 Radical SAM superfamily DJ48_330 PF01098 Cell cycle protein DJ48_3300 PF01510 N-acetylmuramoyl-L-alanine amidase DJ48_3300 PF01476 LysM domain DJ48_3300 PF01471 Putative peptidoglycan binding domain DJ48_3304 PF02245 Methylpurine-DNA glycosylase (MPG) DJ48_3306 PF03306 Alpha-acetolactate decarboxylase DJ48_3307 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ48_3307 PF00205 Thiamine pyrophosphate enzyme, central domain DJ48_3307 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ48_331 PF04101 Glycosyltransferase family 28 C-terminal domain DJ48_331 PF03033 Glycosyltransferase family 28 N-terminal domain DJ48_3310 PF06133 Control of competence regulator ComK, YlbF/YmcA DJ48_3311 PF04286 Protein of unknown function (DUF445) DJ48_3313 PF14398 YheC/D like ATP-grasp DJ48_3315 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ48_3316 PF00005 ABC transporter DJ48_3317 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3318 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ48_3319 PF00664 ABC transporter transmembrane region DJ48_3319 PF00005 ABC transporter DJ48_332 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DJ48_332 PF01565 FAD binding domain DJ48_3320 PF00664 ABC transporter transmembrane region DJ48_3320 PF00005 ABC transporter DJ48_3321 PF00664 ABC transporter transmembrane region DJ48_3321 PF00005 ABC transporter DJ48_3322 PF00171 Aldehyde dehydrogenase family DJ48_3324 PF01177 Asp/Glu/Hydantoin racemase DJ48_3325 PF13520 Amino acid permease DJ48_3327 PF00199 Catalase DJ48_3327 PF18011 C-terminal domain found in long catalases DJ48_3327 PF06628 Catalase-related immune-responsive DJ48_3328 PF01965 DJ-1/PfpI family DJ48_333 PF03799 Cell division protein FtsQ DJ48_333 PF08478 POTRA domain, FtsQ-type DJ48_3330 PF07690 Major Facilitator Superfamily DJ48_3331 PF12793 Sugar transport-related sRNA regulator N-term DJ48_3331 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_3332 PF02525 Flavodoxin-like fold DJ48_3334 PF01638 HxlR-like helix-turn-helix DJ48_3335 PF07690 Major Facilitator Superfamily DJ48_3336 PF00440 Bacterial regulatory proteins, tetR family DJ48_3336 PF17934 Tetracyclin repressor-like, C-terminal domain DJ48_3337 PF00893 Small Multidrug Resistance protein DJ48_3338 PF00893 Small Multidrug Resistance protein DJ48_334 PF02491 SHS2 domain inserted in FTSA DJ48_3340 PF01037 Lrp/AsnC ligand binding domain DJ48_3341 PF00892 EamA-like transporter family DJ48_3344 PF07681 DoxX DJ48_3346 PF02378 Phosphotransferase system, EIIC DJ48_3346 PF00367 phosphotransferase system, EIIB DJ48_3347 PF01380 SIS domain DJ48_3348 PF01418 Helix-turn-helix domain, rpiR family DJ48_3348 PF01380 SIS domain DJ48_335 PF12327 FtsZ family, C-terminal domain DJ48_335 PF00091 Tubulin/FtsZ family, GTPase domain DJ48_3350 PF00999 Sodium/hydrogen exchanger family DJ48_3351 PF13520 Amino acid permease DJ48_3358 PF09335 SNARE associated Golgi protein DJ48_336 PF03419 Sporulation factor SpoIIGA DJ48_3360 PF02735 Ku70/Ku80 beta-barrel domain DJ48_3363 PF11007 Spore coat associated protein JA (CotJA) DJ48_3364 PF12652 CotJB protein DJ48_3365 PF05067 Manganese containing catalase DJ48_3366 PF05525 Branched-chain amino acid transport protein DJ48_3369 PF09529 Integral membrane protein (intg_mem_TP0381) DJ48_337 PF04542 Sigma-70 region 2 DJ48_337 PF04545 Sigma-70, region 4 DJ48_3371 PF00005 ABC transporter DJ48_3372 PF12704 MacB-like periplasmic core domain DJ48_3372 PF02687 FtsX-like permease family DJ48_3373 PF06725 3D domain DJ48_3373 PF01476 LysM domain DJ48_3376 PF02378 Phosphotransferase system, EIIC DJ48_3377 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJ48_3378 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DJ48_3379 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DJ48_3379 PF00874 PRD domain DJ48_3379 PF05043 Mga helix-turn-helix domain DJ48_3379 PF08279 HTH domain DJ48_338 PF04542 Sigma-70 region 2 DJ48_338 PF04539 Sigma-70 region 3 DJ48_338 PF04545 Sigma-70, region 4 DJ48_3381 PF07690 Major Facilitator Superfamily DJ48_3382 PF02690 Na+/Pi-cotransporter DJ48_3383 PF00107 Zinc-binding dehydrogenase DJ48_3383 PF08240 Alcohol dehydrogenase GroES-like domain DJ48_3384 PF03816 Cell envelope-related transcriptional attenuator domain DJ48_3386 PF01925 Sulfite exporter TauE/SafE DJ48_3387 PF13686 DsrE/DsrF/DrsH-like family DJ48_3389 PF00581 Rhodanese-like domain DJ48_339 PF05239 PRC-barrel domain DJ48_3391 PF01206 Sulfurtransferase TusA DJ48_3392 PF00753 Metallo-beta-lactamase superfamily DJ48_3392 PF00581 Rhodanese-like domain DJ48_3393 PF00581 Rhodanese-like domain DJ48_3393 PF01206 Sulfurtransferase TusA DJ48_3394 PF02583 Metal-sensitive transcriptional repressor DJ48_3395 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_3395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ48_34 PF00753 Metallo-beta-lactamase superfamily DJ48_34 PF12706 Beta-lactamase superfamily domain DJ48_3400 PF04293 SpoVR like protein DJ48_3401 PF00881 Nitroreductase family DJ48_3403 PF03323 Bacillus/Clostridium GerA spore germination protein DJ48_3405 PF03845 Spore germination protein DJ48_3407 PF14148 YhdB-like protein DJ48_3408 PF02600 Disulfide bond formation protein DsbB DJ48_3409 PF00085 Thioredoxin DJ48_341 PF01168 Alanine racemase, N-terminal domain DJ48_3411 PF13407 Periplasmic binding protein domain DJ48_3411 PF00356 Bacterial regulatory proteins, lacI family DJ48_3412 PF02378 Phosphotransferase system, EIIC DJ48_3412 PF00367 phosphotransferase system, EIIB DJ48_3413 PF00251 Glycosyl hydrolases family 32 N-terminal domain DJ48_3413 PF08244 Glycosyl hydrolases family 32 C terminal DJ48_3414 PF00294 pfkB family carbohydrate kinase DJ48_3416 PF03734 L,D-transpeptidase catalytic domain DJ48_3416 PF17969 L,D-transpeptidase C-terminal domain DJ48_3418 PF00860 Permease family DJ48_342 PF04472 Cell division protein SepF DJ48_3421 PF01047 MarR family DJ48_3422 PF07690 Major Facilitator Superfamily DJ48_3423 PF02702 Osmosensitive K+ channel His kinase sensor domain DJ48_3424 PF02669 K+-transporting ATPase, c chain DJ48_3426 PF03814 Potassium-transporting ATPase A subunit DJ48_343 PF02325 YGGT family DJ48_3430 PF08543 Phosphomethylpyrimidine kinase DJ48_3431 PF00899 ThiF family DJ48_3432 PF05690 Thiazole biosynthesis protein ThiG DJ48_3433 PF02597 ThiS family DJ48_3434 PF01266 FAD dependent oxidoreductase DJ48_3435 PF02581 Thiamine monophosphate synthase DJ48_3436 PF09084 NMT1/THI5 like DJ48_3437 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3438 PF00005 ABC transporter DJ48_3439 PF03070 TENA/THI-4/PQQC family DJ48_344 PF17774 Putative RNA-binding domain in YlmH DJ48_344 PF01479 S4 domain DJ48_3440 PF00246 Zinc carboxypeptidase DJ48_3440 PF08239 Bacterial SH3 domain DJ48_3443 PF00571 CBS domain DJ48_345 PF05103 DivIVA protein DJ48_346 PF00133 tRNA synthetases class I (I, L, M and V) DJ48_346 PF06827 Zinc finger found in FPG and IleRS DJ48_346 PF08264 Anticodon-binding domain of tRNA DJ48_3468 PF00873 AcrB/AcrD/AcrF family DJ48_3470 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3471 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3472 PF12849 PBP superfamily domain DJ48_3473 PF02421 Ferrous iron transport protein B DJ48_3473 PF17910 FeoB cytosolic helical domain DJ48_3473 PF07664 Ferrous iron transport protein B C terminus DJ48_3473 PF04023 FeoA domain DJ48_3473 PF07670 Nucleoside recognition DJ48_3474 PF07670 Nucleoside recognition DJ48_3474 PF07664 Ferrous iron transport protein B C terminus DJ48_3474 PF17910 FeoB cytosolic helical domain DJ48_3474 PF02421 Ferrous iron transport protein B DJ48_3475 PF07664 Ferrous iron transport protein B C terminus DJ48_3475 PF17910 FeoB cytosolic helical domain DJ48_3475 PF02421 Ferrous iron transport protein B DJ48_3475 PF07670 Nucleoside recognition DJ48_3476 PF05504 Spore germination B3/ GerAC like, C-terminal DJ48_3477 PF03845 Spore germination protein DJ48_3478 PF03323 Bacillus/Clostridium GerA spore germination protein DJ48_3479 PF00474 Sodium:solute symporter family DJ48_348 PF01252 Signal peptidase (SPase) II DJ48_3480 PF11755 Protein of unknown function (DUF3311) DJ48_3481 PF07687 Peptidase dimerisation domain DJ48_3481 PF01546 Peptidase family M20/M25/M40 DJ48_3482 PF01546 Peptidase family M20/M25/M40 DJ48_3482 PF07687 Peptidase dimerisation domain DJ48_3483 PF13529 Peptidase_C39 like family DJ48_3484 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DJ48_3485 PF00115 Cytochrome C and Quinol oxidase polypeptide I DJ48_3486 PF00510 Cytochrome c oxidase subunit III DJ48_3488 PF02254 TrkA-N domain DJ48_3488 PF02080 TrkA-C domain DJ48_3488 PF00999 Sodium/hydrogen exchanger family DJ48_349 PF01479 S4 domain DJ48_349 PF00849 RNA pseudouridylate synthase DJ48_3493 PF00860 Permease family DJ48_3494 PF00324 Amino acid permease DJ48_3498 PF05525 Branched-chain amino acid transport protein DJ48_3499 PF00854 POT family DJ48_35 PF03315 Serine dehydratase beta chain DJ48_35 PF01842 ACT domain DJ48_350 PF01479 S4 domain DJ48_350 PF00849 RNA pseudouridylate synthase DJ48_3500 PF04203 Sortase domain DJ48_3502 PF01381 Helix-turn-helix DJ48_3503 PF01476 LysM domain DJ48_3503 PF06725 3D domain DJ48_3504 PF02743 Cache domain DJ48_3504 PF00672 HAMP domain DJ48_3504 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ48_3505 PF02673 Bacitracin resistance protein BacA DJ48_351 PF00156 Phosphoribosyl transferase domain DJ48_3510 PF03372 Endonuclease/Exonuclease/phosphatase family DJ48_3511 PF00882 Zinc dependent phospholipase C DJ48_3513 PF08240 Alcohol dehydrogenase GroES-like domain DJ48_3513 PF00107 Zinc-binding dehydrogenase DJ48_3516 PF05547 Immune inhibitor A peptidase M6 DJ48_3517 PF00923 Transaldolase/Fructose-6-phosphate aldolase DJ48_3518 PF13407 Periplasmic binding protein domain DJ48_3519 PF02653 Branched-chain amino acid transport system / permease component DJ48_352 PF00860 Permease family DJ48_3520 PF00005 ABC transporter DJ48_3521 PF05025 RbsD / FucU transport protein family DJ48_3522 PF00294 pfkB family carbohydrate kinase DJ48_3523 PF00356 Bacterial regulatory proteins, lacI family DJ48_3524 PF07690 Major Facilitator Superfamily DJ48_3525 PF07690 Major Facilitator Superfamily DJ48_3526 PF01047 MarR family DJ48_3527 PF07690 Major Facilitator Superfamily DJ48_3528 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ48_3528 PF00005 ABC transporter DJ48_3529 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ48_3529 PF00005 ABC transporter DJ48_353 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DJ48_353 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DJ48_3530 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3531 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3532 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_3534 PF00582 Universal stress protein family DJ48_3535 PF00916 Sulfate permease family DJ48_3535 PF01740 STAS domain DJ48_3537 PF00486 Transcriptional regulatory protein, C terminal DJ48_3537 PF00072 Response regulator receiver domain DJ48_3538 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_3538 PF00672 HAMP domain DJ48_3538 PF00989 PAS fold DJ48_3538 PF18698 Histidine kinase sensor domain DJ48_3538 PF00512 His Kinase A (phospho-acceptor) domain DJ48_3539 PF01872 RibD C-terminal domain DJ48_354 PF01979 Amidohydrolase family DJ48_3540 PF13280 WYL domain DJ48_3540 PF08279 HTH domain DJ48_3545 PF00324 Amino acid permease DJ48_3546 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3547 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3548 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ48_3549 PF00005 ABC transporter DJ48_355 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DJ48_355 PF00117 Glutamine amidotransferase class-I DJ48_3550 PF01235 Sodium:alanine symporter family DJ48_3551 PF01636 Phosphotransferase enzyme family DJ48_3553 PF03323 Bacillus/Clostridium GerA spore germination protein DJ48_3556 PF00128 Alpha amylase, catalytic domain DJ48_3556 PF16657 Maltogenic Amylase, C-terminal domain DJ48_3557 PF00367 phosphotransferase system, EIIB DJ48_3557 PF02378 Phosphotransferase system, EIIC DJ48_3558 PF07702 UTRA domain DJ48_3558 PF00392 Bacterial regulatory proteins, gntR family DJ48_3559 PF13520 Amino acid permease DJ48_356 PF02142 MGS-like domain DJ48_356 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ48_356 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DJ48_3560 PF03707 Bacterial signalling protein N terminal repeat DJ48_3560 PF00990 Diguanylate cyclase, GGDEF domain DJ48_3560 PF00563 EAL domain DJ48_3563 PF13091 PLD-like domain DJ48_3563 PF13396 Phospholipase_D-nuclease N-terminal DJ48_3564 PF07728 AAA domain (dynein-related subfamily) DJ48_3565 PF00092 von Willebrand factor type A domain DJ48_3566 PF13344 Haloacid dehalogenase-like hydrolase DJ48_3566 PF00293 NUDIX domain DJ48_3567 PF01370 NAD dependent epimerase/dehydratase family DJ48_3568 PF00155 Aminotransferase class I and II DJ48_3569 PF08241 Methyltransferase domain DJ48_357 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DJ48_357 PF00175 Oxidoreductase NAD-binding domain DJ48_3570 PF00005 ABC transporter DJ48_3571 PF01032 FecCD transport family DJ48_3572 PF01032 FecCD transport family DJ48_3573 PF01497 Periplasmic binding protein DJ48_3574 PF00854 POT family DJ48_3575 PF08141 Small acid-soluble spore protein H family DJ48_3576 PF01022 Bacterial regulatory protein, arsR family DJ48_3577 PF02652 L-lactate permease DJ48_3578 PF00206 Lyase DJ48_3578 PF10415 Fumarase C C-terminus DJ48_3579 PF00206 Lyase DJ48_3579 PF10415 Fumarase C C-terminus DJ48_358 PF01180 Dihydroorotate dehydrogenase DJ48_3580 PF00571 CBS domain DJ48_3580 PF03471 Transporter associated domain DJ48_3580 PF01595 Cyclin M transmembrane N-terminal domain DJ48_3581 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_3582 PF07662 Na+ dependent nucleoside transporter C-terminus DJ48_3582 PF01773 Na+ dependent nucleoside transporter N-terminus DJ48_3583 PF03816 Cell envelope-related transcriptional attenuator domain DJ48_3584 PF04294 VanW like protein DJ48_3587 PF03413 Peptidase propeptide and YPEB domain DJ48_3587 PF01447 Thermolysin metallopeptidase, catalytic domain DJ48_3587 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ48_3587 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ48_359 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DJ48_3590 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DJ48_3590 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DJ48_3590 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DJ48_3591 PF00403 Heavy-metal-associated domain DJ48_3592 PF00403 Heavy-metal-associated domain DJ48_3593 PF01022 Bacterial regulatory protein, arsR family DJ48_3594 PF13520 Amino acid permease DJ48_3595 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DJ48_3595 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DJ48_3597 PF07849 Protein of unknown function (DUF1641) DJ48_3598 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJ48_3598 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJ48_3598 PF00384 Molybdopterin oxidoreductase DJ48_3598 PF01568 Molydopterin dinucleotide binding domain DJ48_3598 PF00037 4Fe-4S binding domain DJ48_3599 PF02634 FdhD/NarQ family DJ48_36 PF03313 Serine dehydratase alpha chain DJ48_360 PF00156 Phosphoribosyl transferase domain DJ48_3600 PF00583 Acetyltransferase (GNAT) family DJ48_3600 PF13508 Acetyltransferase (GNAT) domain DJ48_3602 PF00072 Response regulator receiver domain DJ48_3602 PF00486 Transcriptional regulatory protein, C terminal DJ48_3603 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_3603 PF00512 His Kinase A (phospho-acceptor) domain DJ48_3603 PF18698 Histidine kinase sensor domain DJ48_3603 PF00989 PAS fold DJ48_3603 PF00672 HAMP domain DJ48_3605 PF00155 Aminotransferase class I and II DJ48_3605 PF00392 Bacterial regulatory proteins, gntR family DJ48_3606 PF00892 EamA-like transporter family DJ48_3608 PF03949 Malic enzyme, NAD binding domain DJ48_3608 PF00390 Malic enzyme, N-terminal domain DJ48_3609 PF03390 2-hydroxycarboxylate transporter family DJ48_3610 PF00072 Response regulator receiver domain DJ48_3611 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DJ48_3611 PF17203 Single cache domain 3 DJ48_3611 PF00989 PAS fold DJ48_3611 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_3612 PF02743 Cache domain DJ48_3612 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ48_3612 PF00672 HAMP domain DJ48_3613 PF13529 Peptidase_C39 like family DJ48_3615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_3615 PF00512 His Kinase A (phospho-acceptor) domain DJ48_3616 PF00072 Response regulator receiver domain DJ48_3616 PF00486 Transcriptional regulatory protein, C terminal DJ48_3617 PF00149 Calcineurin-like phosphoesterase DJ48_3618 PF13416 Bacterial extracellular solute-binding protein DJ48_3619 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3620 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3621 PF17912 MalK OB fold domain DJ48_3621 PF00005 ABC transporter DJ48_3622 PF04309 Glycerol-3-phosphate responsive antiterminator DJ48_3626 PF03600 Citrate transporter DJ48_3627 PF08279 HTH domain DJ48_3627 PF12431 Transcriptional regulator DJ48_3627 PF00072 Response regulator receiver domain DJ48_3628 PF00989 PAS fold DJ48_3628 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DJ48_3628 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_3628 PF17203 Single cache domain 3 DJ48_3629 PF02743 Cache domain DJ48_3629 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ48_3629 PF00672 HAMP domain DJ48_3630 PF00672 HAMP domain DJ48_3630 PF02743 Cache domain DJ48_3630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ48_3631 PF15975 Flotillin DJ48_3631 PF01145 SPFH domain / Band 7 family DJ48_3633 PF18496 Collagenase G catalytic helper subdomain DJ48_3633 PF08453 Peptidase family M9 N-terminal DJ48_3633 PF01752 Collagenase DJ48_3634 PF02028 BCCT, betaine/carnitine/choline family transporter DJ48_3637 PF04285 Protein of unknown function (DUF444) DJ48_3638 PF06798 PrkA serine protein kinase C-terminal domain DJ48_3638 PF08298 PrkA AAA domain DJ48_3640 PF00563 EAL domain DJ48_3640 PF00990 Diguanylate cyclase, GGDEF domain DJ48_3640 PF03707 Bacterial signalling protein N terminal repeat DJ48_3641 PF00588 SpoU rRNA Methylase family DJ48_3642 PF12671 Putative amidase domain DJ48_3643 PF08331 Domain of unknown function (DUF1730) DJ48_3645 PF13462 Thioredoxin DJ48_3646 PF00905 Penicillin binding protein transpeptidase domain DJ48_3646 PF00912 Transglycosylase DJ48_3647 PF00293 NUDIX domain DJ48_3647 PF13344 Haloacid dehalogenase-like hydrolase DJ48_3648 PF01709 Transcriptional regulator DJ48_366 PF01321 Creatinase/Prolidase N-terminal domain DJ48_366 PF00557 Metallopeptidase family M24 DJ48_3670 PF11023 Zinc-ribbon containing domain DJ48_3671 PF01475 Ferric uptake regulator family DJ48_3672 PF00578 AhpC/TSA family DJ48_3673 PF07885 Ion channel DJ48_3676 PF00005 ABC transporter DJ48_3677 PF00202 Aminotransferase class-III DJ48_3678 PF01493 GXGXG motif DJ48_3678 PF01645 Conserved region in glutamate synthase DJ48_3678 PF00310 Glutamine amidotransferases class-II DJ48_3678 PF04898 Glutamate synthase central domain DJ48_3679 PF06081 Aromatic acid exporter family member 1 DJ48_368 PF00689 Cation transporting ATPase, C-terminus DJ48_368 PF00690 Cation transporter/ATPase, N-terminus DJ48_3680 PF00005 ABC transporter DJ48_3680 PF00664 ABC transporter transmembrane region DJ48_3681 PF04167 Protein of unknown function (DUF402) DJ48_3682 PF14182 YgaB-like protein DJ48_3683 PF04259 Small, acid-soluble spore protein, gamma-type DJ48_3685 PF14815 NUDIX domain DJ48_3685 PF00730 HhH-GPD superfamily base excision DNA repair protein DJ48_3686 PF04307 LexA-binding, inner membrane-associated putative hydrolase DJ48_3687 PF14043 WVELL protein DJ48_3688 PF08176 Small acid-soluble spore protein K family DJ48_369 PF03755 YicC-like family, N-terminal region DJ48_369 PF08340 Domain of unknown function (DUF1732) DJ48_3691 PF02631 RecX family DJ48_3692 PF01370 NAD dependent epimerase/dehydratase family DJ48_3692 PF08338 Domain of unknown function (DUF1731) DJ48_3693 PF01979 Amidohydrolase family DJ48_3696 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DJ48_3696 PF04101 Glycosyltransferase family 28 C-terminal domain DJ48_3697 PF04055 Radical SAM superfamily DJ48_3698 PF02901 Pyruvate formate lyase-like DJ48_3698 PF01228 Glycine radical DJ48_3699 PF00535 Glycosyl transferase family 2 DJ48_37 PF03807 NADP oxidoreductase coenzyme F420-dependent DJ48_37 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJ48_370 PF04025 Domain of unknown function (DUF370) DJ48_3700 PF01370 NAD dependent epimerase/dehydratase family DJ48_3700 PF02911 Formyl transferase, C-terminal domain DJ48_3700 PF00551 Formyl transferase DJ48_3701 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ48_3701 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ48_3701 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ48_3702 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ48_3702 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ48_3702 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ48_3703 PF00535 Glycosyl transferase family 2 DJ48_3706 PF00144 Beta-lactamase DJ48_3707 PF02378 Phosphotransferase system, EIIC DJ48_3707 PF00367 phosphotransferase system, EIIB DJ48_3708 PF04960 Glutaminase DJ48_371 PF00625 Guanylate kinase DJ48_3713 PF01546 Peptidase family M20/M25/M40 DJ48_3713 PF07687 Peptidase dimerisation domain DJ48_3714 PF00324 Amino acid permease DJ48_3716 PF13426 PAS domain DJ48_3716 PF00158 Sigma-54 interaction domain DJ48_3716 PF02954 Bacterial regulatory protein, Fis family DJ48_3718 PF01416 tRNA pseudouridine synthase DJ48_372 PF01192 RNA polymerase Rpb6 DJ48_373 PF02441 Flavoprotein DJ48_373 PF04127 DNA / pantothenate metabolism flavoprotein DJ48_374 PF18074 Primosomal protein N C-terminal domain DJ48_374 PF04851 Type III restriction enzyme, res subunit DJ48_374 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DJ48_374 PF17764 3′ DNA-binding domain (3′BD) DJ48_374 PF00271 Helicase conserved C-terminal domain DJ48_3744 PF00589 Phage integrase family DJ48_375 PF01327 Polypeptide deformylase DJ48_376 PF00551 Formyl transferase DJ48_376 PF02911 Formyl transferase, C-terminal domain DJ48_3765 PF07319 Primosomal protein DnaI N-terminus DJ48_3765 PF01695 IstB-like ATP binding protein DJ48_377 PF01189 16S rRNA methyltransferase RsmB/F DJ48_377 PF01029 NusB family DJ48_3772 PF01381 Helix-turn-helix DJ48_3776 PF14659 Phage integrase, N-terminal SAM-like domain DJ48_3776 PF00589 Phage integrase family DJ48_3777 PF01938 TRAM domain DJ48_3777 PF05958 tRNA (Uracil-5-)-methyltransferase DJ48_3778 PF00730 HhH-GPD superfamily base excision DNA repair protein DJ48_378 PF04055 Radical SAM superfamily DJ48_3780 PF01522 Polysaccharide deacetylase DJ48_3781 PF05681 Fumarate hydratase (Fumerase) DJ48_3781 PF05683 Fumarase C-terminus DJ48_3783 PF08756 YfkB-like domain DJ48_3783 PF04055 Radical SAM superfamily DJ48_3784 PF14167 YfkD-like protein DJ48_3785 PF01699 Sodium/calcium exchanger protein DJ48_3786 PF16242 Pyridoxamine 5'-phosphate oxidase like DJ48_3789 PF09335 SNARE associated Golgi protein DJ48_3791 PF10502 Signal peptidase, peptidase S26 DJ48_3793 PF00892 EamA-like transporter family DJ48_3795 PF03631 Virulence factor BrkB DJ48_3797 PF01451 Low molecular weight phosphotyrosine protein phosphatase DJ48_3798 PF06569 Protein of unknown function (DUF1128) DJ48_3799 PF00689 Cation transporting ATPase, C-terminus DJ48_3799 PF00690 Cation transporter/ATPase, N-terminus DJ48_38 PF00753 Metallo-beta-lactamase superfamily DJ48_380 PF03793 PASTA domain DJ48_380 PF00069 Protein kinase domain DJ48_3800 PF05816 Toxic anion resistance protein (TelA) DJ48_3801 PF14266 Putative component of 'biosynthetic module' DJ48_3802 PF03741 Integral membrane protein TerC family DJ48_3803 PF02342 TerD domain DJ48_3804 PF02342 TerD domain DJ48_3805 PF02342 TerD domain DJ48_3806 PF00480 ROK family DJ48_3808 PF03129 Anticodon binding domain DJ48_3808 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ48_3808 PF09180 Prolyl-tRNA synthetase, C-terminal DJ48_381 PF16745 RsgA N-terminal domain DJ48_381 PF03193 RsgA GTPase DJ48_3812 PF11700 Vacuole effluxer Atg22 like DJ48_3816 PF08360 QacR-like protein, C-terminal region DJ48_3816 PF00440 Bacterial regulatory proteins, tetR family DJ48_382 PF00834 Ribulose-phosphate 3 epimerase family DJ48_3820 PF00041 Fibronectin type III domain DJ48_3820 PF00704 Glycosyl hydrolases family 18 DJ48_3821 PF00005 ABC transporter DJ48_3821 PF12848 ABC transporter DJ48_3822 PF00005 ABC transporter DJ48_3823 PF03459 TOBE domain DJ48_3823 PF17912 MalK OB fold domain DJ48_3823 PF00005 ABC transporter DJ48_3825 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3826 PF01910 Thiamine-binding protein DJ48_3827 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ48_3827 PF00672 HAMP domain DJ48_3828 PF03605 Anaerobic c4-dicarboxylate membrane transporter DJ48_3829 PF02581 Thiamine monophosphate synthase DJ48_383 PF04263 Thiamin pyrophosphokinase, catalytic domain DJ48_383 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DJ48_3830 PF02110 Hydroxyethylthiazole kinase family DJ48_3831 PF01751 Toprim domain DJ48_3831 PF01131 DNA topoisomerase DJ48_3832 PF01061 ABC-2 type transporter DJ48_3833 PF03372 Endonuclease/Exonuclease/phosphatase family DJ48_3834 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DJ48_3834 PF00367 phosphotransferase system, EIIB DJ48_3834 PF02378 Phosphotransferase system, EIIC DJ48_3835 PF16657 Maltogenic Amylase, C-terminal domain DJ48_3835 PF00128 Alpha amylase, catalytic domain DJ48_3836 PF00672 HAMP domain DJ48_3836 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ48_3836 PF12729 Four helix bundle sensory module for signal transduction DJ48_3837 PF00672 HAMP domain DJ48_3837 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ48_3837 PF12729 Four helix bundle sensory module for signal transduction DJ48_3838 PF00005 ABC transporter DJ48_3839 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ48_384 PF00830 Ribosomal L28 family DJ48_3840 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3842 PF01266 FAD dependent oxidoreductase DJ48_3842 PF00355 Rieske [2Fe-2S] domain DJ48_3843 PF07690 Major Facilitator Superfamily DJ48_3844 PF10127 RNA repair pathway DNA polymerase beta family DJ48_3848 PF13188 PAS domain DJ48_3848 PF00512 His Kinase A (phospho-acceptor) domain DJ48_3848 PF13426 PAS domain DJ48_3848 PF00989 PAS fold DJ48_3848 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_385 PF03780 Asp23 family, cell envelope-related function DJ48_3854 PF12728 Helix-turn-helix domain DJ48_3856 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_3857 PF01497 Periplasmic binding protein DJ48_3858 PF01032 FecCD transport family DJ48_3859 PF01032 FecCD transport family DJ48_386 PF02734 DAK2 domain DJ48_386 PF13684 Dihydroxyacetone kinase family DJ48_3860 PF00596 Class II Aldolase and Adducin N-terminal domain DJ48_3862 PF01636 Phosphotransferase enzyme family DJ48_3863 PF00578 AhpC/TSA family DJ48_3864 PF13192 Thioredoxin domain DJ48_3864 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_3866 PF07687 Peptidase dimerisation domain DJ48_3866 PF01546 Peptidase family M20/M25/M40 DJ48_3869 PF13378 Enolase C-terminal domain-like DJ48_3869 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ48_387 PF17191 RecG wedge domain DJ48_387 PF00270 DEAD/DEAH box helicase DJ48_387 PF00271 Helicase conserved C-terminal domain DJ48_3872 PF07308 Protein of unknown function (DUF1456) DJ48_3874 PF01207 Dihydrouridine synthase (Dus) DJ48_3875 PF05958 tRNA (Uracil-5-)-methyltransferase DJ48_3875 PF01938 TRAM domain DJ48_3875 PF02475 Met-10+ like-protein DJ48_3876 PF01773 Na+ dependent nucleoside transporter N-terminus DJ48_3876 PF07662 Na+ dependent nucleoside transporter C-terminus DJ48_3876 PF07670 Nucleoside recognition DJ48_3879 PF02073 Thermophilic metalloprotease (M29) DJ48_388 PF03061 Thioesterase superfamily DJ48_3880 PF00893 Small Multidrug Resistance protein DJ48_3881 PF00171 Aldehyde dehydrogenase family DJ48_3882 PF00158 Sigma-54 interaction domain DJ48_3883 PF00202 Aminotransferase class-III DJ48_3884 PF13419 Haloacid dehalogenase-like hydrolase DJ48_3885 PF00781 Diacylglycerol kinase catalytic domain DJ48_3886 PF02637 GatB domain DJ48_3886 PF02934 GatB/GatE catalytic domain DJ48_3887 PF01425 Amidase DJ48_3888 PF02686 Glu-tRNAGln amidotransferase C subunit DJ48_3889 PF05360 yiaA/B two helix domain DJ48_389 PF02504 Fatty acid synthesis protein DJ48_3890 PF01047 MarR family DJ48_3891 PF02374 Anion-transporting ATPase DJ48_3891 PF17886 HSP20-like domain found in ArsA DJ48_3894 PF03180 NLPA lipoprotein DJ48_3895 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_3896 PF00005 ABC transporter DJ48_3896 PF09383 NIL domain DJ48_3897 PF00857 Isochorismatase family DJ48_3899 PF00171 Aldehyde dehydrogenase family DJ48_39 PF00106 short chain dehydrogenase DJ48_390 PF00698 Acyl transferase domain DJ48_3900 PF01925 Sulfite exporter TauE/SafE DJ48_3901 PF07537 CamS sex pheromone cAM373 precursor DJ48_3902 PF03120 NAD-dependent DNA ligase OB-fold domain DJ48_3902 PF00533 BRCA1 C Terminus (BRCT) domain DJ48_3902 PF01653 NAD-dependent DNA ligase adenylation domain DJ48_3902 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DJ48_3902 PF12826 Helix-hairpin-helix motif DJ48_3903 PF13361 UvrD-like helicase C-terminal domain DJ48_3903 PF00580 UvrD/REP helicase N-terminal domain DJ48_3904 PF01884 PcrB family DJ48_3908 PF02844 Phosphoribosylglycinamide synthetase, N domain DJ48_3908 PF02843 Phosphoribosylglycinamide synthetase, C domain DJ48_3908 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DJ48_3909 PF01808 AICARFT/IMPCHase bienzyme DJ48_3909 PF02142 MGS-like domain DJ48_3910 PF00551 Formyl transferase DJ48_3911 PF02769 AIR synthase related protein, C-terminal domain DJ48_3911 PF00586 AIR synthase related protein, N-terminal domain DJ48_3912 PF00156 Phosphoribosyl transferase domain DJ48_3913 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DJ48_3913 PF00586 AIR synthase related protein, N-terminal domain DJ48_3913 PF02769 AIR synthase related protein, C-terminal domain DJ48_3915 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DJ48_3916 PF01259 SAICAR synthetase DJ48_3917 PF10397 Adenylosuccinate lyase C-terminus DJ48_3917 PF00206 Lyase DJ48_3918 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DJ48_3918 PF02222 ATP-grasp domain DJ48_3919 PF00731 AIR carboxylase DJ48_392 PF00550 Phosphopantetheine attachment site DJ48_3924 PF00486 Transcriptional regulatory protein, C terminal DJ48_3924 PF00072 Response regulator receiver domain DJ48_3925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_3925 PF00512 His Kinase A (phospho-acceptor) domain DJ48_3926 PF00005 ABC transporter DJ48_3928 PF02673 Bacitracin resistance protein BacA DJ48_393 PF14622 Ribonuclease-III-like DJ48_393 PF00035 Double-stranded RNA binding motif DJ48_3933 PF00535 Glycosyl transferase family 2 DJ48_3938 PF08241 Methyltransferase domain DJ48_394 PF06470 SMC proteins Flexible Hinge Domain DJ48_394 PF02463 RecF/RecN/SMC N terminal domain DJ48_3940 PF14307 Glycosyltransferase WbsX DJ48_3940 PF05045 Rhamnan synthesis protein F DJ48_3945 PF00989 PAS fold DJ48_3945 PF16736 Single Cache-like DJ48_3945 PF00512 His Kinase A (phospho-acceptor) domain DJ48_3945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_3946 PF00072 Response regulator receiver domain DJ48_3946 PF00486 Transcriptional regulatory protein, C terminal DJ48_3947 PF00860 Permease family DJ48_3948 PF00958 GMP synthase C terminal domain DJ48_3948 PF00117 Glutamine amidotransferase class-I DJ48_3948 PF02540 NAD synthase DJ48_3949 PF00118 TCP-1/cpn60 chaperonin family DJ48_395 PF02881 SRP54-type protein, helical bundle domain DJ48_395 PF00448 SRP54-type protein, GTPase domain DJ48_3950 PF00166 Chaperonin 10 Kd subunit DJ48_3951 PF02517 CPBP intramembrane metalloprotease DJ48_3953 PF06971 Putative DNA-binding protein N-terminus DJ48_3953 PF02629 CoA binding domain DJ48_3954 PF00005 ABC transporter DJ48_3954 PF16326 ABC transporter C-terminal domain DJ48_3954 PF12848 ABC transporter DJ48_3955 PF00814 Glycoprotease family DJ48_3956 PF00583 Acetyltransferase (GNAT) family DJ48_3957 PF00814 Glycoprotease family DJ48_3958 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DJ48_396 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DJ48_397 PF02978 Signal peptide binding domain DJ48_397 PF00448 SRP54-type protein, GTPase domain DJ48_397 PF02881 SRP54-type protein, helical bundle domain DJ48_3976 PF10263 SprT-like family DJ48_3976 PF17283 SprT-like zinc ribbon domain DJ48_3977 PF00575 S1 RNA binding domain DJ48_3977 PF16921 Tex protein YqgF-like domain DJ48_3977 PF17674 HHH domain DJ48_3977 PF09371 Tex-like protein N-terminal domain DJ48_3978 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DJ48_3979 PF01402 Ribbon-helix-helix protein, copG family DJ48_398 PF00886 Ribosomal protein S16 DJ48_3980 PF01168 Alanine racemase, N-terminal domain DJ48_3980 PF00842 Alanine racemase, C-terminal domain DJ48_3982 PF01648 4'-phosphopantetheinyl transferase superfamily DJ48_3983 PF03851 UV-endonuclease UvdE DJ48_3984 PF01694 Rhomboid family DJ48_3985 PF00271 Helicase conserved C-terminal domain DJ48_3985 PF00270 DEAD/DEAH box helicase DJ48_3986 PF08245 Mur ligase middle domain DJ48_3986 PF02875 Mur ligase family, glutamate ligase domain DJ48_3986 PF01225 Mur ligase family, catalytic domain DJ48_3987 PF01820 D-ala D-ala ligase N-terminus DJ48_3987 PF07478 D-ala D-ala ligase C-terminus DJ48_3988 PF07690 Major Facilitator Superfamily DJ48_3990 PF01557 Fumarylacetoacetate (FAA) hydrolase family DJ48_3991 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_3998 PF00005 ABC transporter DJ48_3998 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ48_3999 PF00005 ABC transporter DJ48_3999 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ48_4 PF13476 AAA domain DJ48_400 PF01782 RimM N-terminal domain DJ48_400 PF05239 PRC-barrel domain DJ48_4001 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_4002 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_4005 PF16326 ABC transporter C-terminal domain DJ48_4005 PF12848 ABC transporter DJ48_4005 PF00005 ABC transporter DJ48_4009 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) DJ48_401 PF01746 tRNA (Guanine-1)-methyltransferase DJ48_4010 PF01026 TatD related DNase DJ48_4013 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ48_4013 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ48_4015 PF00356 Bacterial regulatory proteins, lacI family DJ48_4015 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJ48_4017 PF01553 Acyltransferase DJ48_4019 PF14142 YrzO-like protein DJ48_402 PF01245 Ribosomal protein L19 DJ48_4020 PF00892 EamA-like transporter family DJ48_4021 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ48_4021 PF03466 LysR substrate binding domain DJ48_4024 PF12728 Helix-turn-helix domain DJ48_4024 PF12727 PBP superfamily domain DJ48_4026 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_4027 PF06800 Sugar transport protein DJ48_4028 PF04973 Nicotinamide mononucleotide transporter DJ48_4029 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJ48_4029 PF03807 NADP oxidoreductase coenzyme F420-dependent DJ48_403 PF10502 Signal peptidase, peptidase S26 DJ48_4030 PF00248 Aldo/keto reductase family DJ48_4031 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_4032 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_4035 PF12833 Helix-turn-helix domain DJ48_4037 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_4038 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ48_4038 PF00005 ABC transporter DJ48_4039 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ48_4039 PF00005 ABC transporter DJ48_404 PF01926 50S ribosome-binding GTPase DJ48_4040 PF12911 N-terminal TM domain of oligopeptide transport permease C DJ48_4040 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_4041 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_4044 PF07690 Major Facilitator Superfamily DJ48_4046 PF07690 Major Facilitator Superfamily DJ48_4047 PF01565 FAD binding domain DJ48_405 PF01351 Ribonuclease HII DJ48_4050 PF03180 NLPA lipoprotein DJ48_4051 PF09383 NIL domain DJ48_4051 PF00005 ABC transporter DJ48_4052 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_4059 PF07676 WD40-like Beta Propeller Repeat DJ48_4059 PF00326 Prolyl oligopeptidase family DJ48_406 PF00549 CoA-ligase DJ48_406 PF08442 ATP-grasp domain DJ48_4060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ48_4060 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DJ48_4061 PF02447 GntP family permease DJ48_4062 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ48_4062 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ48_4063 PF07729 FCD domain DJ48_4063 PF00392 Bacterial regulatory proteins, gntR family DJ48_4064 PF00561 alpha/beta hydrolase fold DJ48_4065 PF01380 SIS domain DJ48_4066 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DJ48_4066 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DJ48_4066 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DJ48_4066 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DJ48_4067 PF07949 YbbR-like protein DJ48_4068 PF02457 DisA bacterial checkpoint controller nucleotide-binding DJ48_4069 PF00491 Arginase family DJ48_407 PF00549 CoA-ligase DJ48_407 PF02629 CoA binding domain DJ48_4070 PF02595 Glycerate kinase family DJ48_4071 PF02595 Glycerate kinase family DJ48_408 PF02481 DNA recombination-mediator protein A DJ48_4086 PF01522 Polysaccharide deacetylase DJ48_4087 PF14089 KinB-signalling pathway activation in sporulation DJ48_4088 PF17898 Spore germination GerD central core domain DJ48_4089 PF10609 NUBPL iron-transfer P-loop NTPase DJ48_409 PF01396 Topoisomerase DNA binding C4 zinc finger DJ48_409 PF01751 Toprim domain DJ48_409 PF01131 DNA topoisomerase DJ48_4090 PF01520 N-acetylmuramoyl-L-alanine amidase DJ48_4092 PF00380 Ribosomal protein S9/S16 DJ48_4093 PF00572 Ribosomal protein L13 DJ48_4094 PF01416 tRNA pseudouridine synthase DJ48_4095 PF02361 Cobalt transport protein DJ48_4096 PF00005 ABC transporter DJ48_4097 PF00005 ABC transporter DJ48_4098 PF01196 Ribosomal protein L17 DJ48_4099 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DJ48_4099 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DJ48_4099 PF01000 RNA polymerase Rpb3/RpoA insert domain DJ48_41 PF01118 Semialdehyde dehydrogenase, NAD binding domain DJ48_41 PF02774 Semialdehyde dehydrogenase, dimerisation domain DJ48_410 PF01134 Glucose inhibited division protein A DJ48_4100 PF00411 Ribosomal protein S11 DJ48_4101 PF00416 Ribosomal protein S13/S18 DJ48_4102 PF00444 Ribosomal protein L36 DJ48_4103 PF01176 Translation initiation factor 1A / IF-1 DJ48_4104 PF00557 Metallopeptidase family M24 DJ48_4105 PF05191 Adenylate kinase, active site lid DJ48_4106 PF00344 SecY translocase DJ48_4107 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DJ48_4108 PF00327 Ribosomal protein L30p/L7e DJ48_4109 PF00333 Ribosomal protein S5, N-terminal domain DJ48_4109 PF03719 Ribosomal protein S5, C-terminal domain DJ48_411 PF00589 Phage integrase family DJ48_411 PF02899 Phage integrase, N-terminal SAM-like domain DJ48_4110 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DJ48_4111 PF00347 Ribosomal protein L6 DJ48_4112 PF00410 Ribosomal protein S8 DJ48_4113 PF00253 Ribosomal protein S14p/S29e DJ48_4114 PF00281 Ribosomal protein L5 DJ48_4114 PF00673 ribosomal L5P family C-terminus DJ48_4115 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DJ48_4115 PF00467 KOW motif DJ48_4116 PF00238 Ribosomal protein L14p/L23e DJ48_4117 PF00366 Ribosomal protein S17 DJ48_4118 PF00831 Ribosomal L29 protein DJ48_4119 PF00252 Ribosomal protein L16p/L10e DJ48_412 PF00227 Proteasome subunit DJ48_4120 PF07650 KH domain DJ48_4120 PF00189 Ribosomal protein S3, C-terminal domain DJ48_4121 PF00237 Ribosomal protein L22p/L17e DJ48_4122 PF00203 Ribosomal protein S19 DJ48_4123 PF00181 Ribosomal Proteins L2, RNA binding domain DJ48_4123 PF03947 Ribosomal Proteins L2, C-terminal domain DJ48_4124 PF00276 Ribosomal protein L23 DJ48_4125 PF00573 Ribosomal protein L4/L1 family DJ48_4126 PF00297 Ribosomal protein L3 DJ48_4127 PF00338 Ribosomal protein S10p/S20e DJ48_4128 PF03143 Elongation factor Tu C-terminal domain DJ48_4128 PF00009 Elongation factor Tu GTP binding domain DJ48_4128 PF03144 Elongation factor Tu domain 2 DJ48_4129 PF14492 Elongation Factor G, domain II DJ48_4129 PF00009 Elongation factor Tu GTP binding domain DJ48_4129 PF03764 Elongation factor G, domain IV DJ48_4129 PF00679 Elongation factor G C-terminus DJ48_4129 PF03144 Elongation factor Tu domain 2 DJ48_413 PF07724 AAA domain (Cdc48 subfamily) DJ48_413 PF10431 C-terminal, D2-small domain, of ClpB protein DJ48_413 PF00004 ATPase family associated with various cellular activities (AAA) DJ48_4130 PF00177 Ribosomal protein S7p/S5e DJ48_4131 PF00164 Ribosomal protein S12/S23 DJ48_4132 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DJ48_4133 PF04997 RNA polymerase Rpb1, domain 1 DJ48_4133 PF04983 RNA polymerase Rpb1, domain 3 DJ48_4133 PF05000 RNA polymerase Rpb1, domain 4 DJ48_4133 PF00623 RNA polymerase Rpb1, domain 2 DJ48_4133 PF04998 RNA polymerase Rpb1, domain 5 DJ48_4134 PF00562 RNA polymerase Rpb2, domain 6 DJ48_4134 PF10385 RNA polymerase beta subunit external 1 domain DJ48_4134 PF04563 RNA polymerase beta subunit DJ48_4134 PF04561 RNA polymerase Rpb2, domain 2 DJ48_4134 PF04565 RNA polymerase Rpb2, domain 3 DJ48_4134 PF04560 RNA polymerase Rpb2, domain 7 DJ48_4135 PF05175 Methyltransferase small domain DJ48_4136 PF16320 Ribosomal protein L7/L12 dimerisation domain DJ48_4136 PF00542 Ribosomal protein L7/L12 C-terminal domain DJ48_4137 PF00466 Ribosomal protein L10 DJ48_4138 PF00687 Ribosomal protein L1p/L10e family DJ48_4139 PF03946 Ribosomal protein L11, N-terminal domain DJ48_4139 PF00298 Ribosomal protein L11, RNA binding domain DJ48_414 PF08222 CodY helix-turn-helix domain DJ48_414 PF06018 CodY GAF-like domain DJ48_4140 PF00467 KOW motif DJ48_4140 PF02357 Transcription termination factor nusG DJ48_4141 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DJ48_4142 PF04542 Sigma-70 region 2 DJ48_4142 PF08281 Sigma-70, region 4 DJ48_4143 PF05991 YacP-like NYN domain DJ48_4144 PF00588 SpoU rRNA Methylase family DJ48_4144 PF08032 RNA 2'-O ribose methyltransferase substrate binding DJ48_4145 PF00636 Ribonuclease III domain DJ48_4146 PF09190 DALR domain DJ48_4146 PF01406 tRNA synthetases class I (C) catalytic domain DJ48_4147 PF06426 Serine acetyltransferase, N-terminal DJ48_4147 PF00132 Bacterial transferase hexapeptide (six repeats) DJ48_4148 PF00749 tRNA synthetases class I (E and Q), catalytic domain DJ48_4149 PF02542 YgbB family DJ48_415 PF00318 Ribosomal protein S2 DJ48_4150 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DJ48_4152 PF02457 DisA bacterial checkpoint controller nucleotide-binding DJ48_4152 PF10635 DisA bacterial checkpoint controller linker region DJ48_4153 PF18073 Rubredoxin metal binding domain DJ48_4154 PF10431 C-terminal, D2-small domain, of ClpB protein DJ48_4154 PF02861 Clp amino terminal domain, pathogenicity island component DJ48_4154 PF17871 AAA lid domain DJ48_4154 PF07724 AAA domain (Cdc48 subfamily) DJ48_4154 PF00004 ATPase family associated with various cellular activities (AAA) DJ48_4155 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DJ48_4156 PF02151 UvrB/uvrC motif DJ48_4157 PF17727 CtsR C-terminal dimerization domain DJ48_4157 PF05848 CtsR N-terminal HTH domain DJ48_416 PF00889 Elongation factor TS DJ48_4162 PF00152 tRNA synthetases class II (D, K and N) DJ48_4162 PF01336 OB-fold nucleic acid binding domain DJ48_4163 PF01207 Dihydrouridine synthase (Dus) DJ48_4164 PF01381 Helix-turn-helix DJ48_4165 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DJ48_4166 PF02152 Dihydroneopterin aldolase DJ48_4167 PF00809 Pterin binding enzyme DJ48_4168 PF01063 Amino-transferase class IV DJ48_4169 PF00117 Glutamine amidotransferase class-I DJ48_417 PF00696 Amino acid kinase family DJ48_4170 PF00425 chorismate binding enzyme DJ48_4170 PF04715 Anthranilate synthase component I, N terminal region DJ48_4171 PF00291 Pyridoxal-phosphate dependent enzyme DJ48_4172 PF01430 Hsp33 protein DJ48_4173 PF03309 Type III pantothenate kinase DJ48_4174 PF01434 Peptidase family M41 DJ48_4174 PF06480 FtsH Extracellular DJ48_4174 PF17862 AAA+ lid domain DJ48_4174 PF00004 ATPase family associated with various cellular activities (AAA) DJ48_4176 PF01171 PP-loop family DJ48_4176 PF09179 TilS substrate binding domain DJ48_4176 PF11734 TilS substrate C-terminal domain DJ48_4177 PF07228 Stage II sporulation protein E (SpoIIE) DJ48_418 PF01765 Ribosome recycling factor DJ48_4180 PF00575 S1 RNA binding domain DJ48_4182 PF09578 Spore cortex protein YabQ (Spore_YabQ) DJ48_4183 PF07873 YabP family DJ48_4184 PF01479 S4 domain DJ48_4185 PF03819 MazG nucleotide pyrophosphohydrolase domain DJ48_4185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ48_4186 PF14667 Polysaccharide biosynthesis C-terminal domain DJ48_4186 PF01943 Polysaccharide biosynthesis protein DJ48_4187 PF15714 Stage V sporulation protein T C-terminal, transcription factor DJ48_4187 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DJ48_4188 PF00271 Helicase conserved C-terminal domain DJ48_4188 PF02559 CarD-like/TRCF domain DJ48_4188 PF00270 DEAD/DEAH box helicase DJ48_4188 PF17757 UvrB interaction domain DJ48_4188 PF03461 TRCF domain DJ48_419 PF01255 Putative undecaprenyl diphosphate synthase DJ48_4190 PF01195 Peptidyl-tRNA hydrolase DJ48_4191 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DJ48_4191 PF14572 Phosphoribosyl synthetase-associated domain DJ48_4192 PF00132 Bacterial transferase hexapeptide (six repeats) DJ48_4192 PF00483 Nucleotidyl transferase DJ48_4193 PF04026 SpoVG DJ48_4194 PF01042 Endoribonuclease L-PSP DJ48_4195 PF00156 Phosphoribosyl transferase domain DJ48_4195 PF09182 Bacterial purine repressor, N-terminal DJ48_4196 PF00288 GHMP kinases N terminal domain DJ48_4196 PF08544 GHMP kinases C terminal DJ48_4197 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ48_4198 PF06257 Biofilm formation stimulator VEG DJ48_4199 PF05582 YabG peptidase U57 DJ48_42 PF01960 ArgJ family DJ48_4200 PF00398 Ribosomal RNA adenine dimethylase DJ48_4201 PF13331 Domain of unknown function (DUF4093) DJ48_4201 PF13662 Toprim domain DJ48_4202 PF01026 TatD related DNase DJ48_4203 PF09334 tRNA synthetases class I (M) DJ48_4203 PF01588 Putative tRNA binding domain DJ48_4203 PF08264 Anticodon-binding domain of tRNA DJ48_4204 PF18277 AbrB C-terminal domain DJ48_4204 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DJ48_4205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ48_4206 PF01541 GIY-YIG catalytic domain DJ48_4207 PF05175 Methyltransferase small domain DJ48_4208 PF06156 Initiation control protein YabA DJ48_4209 PF04468 PSP1 C-terminal conserved region DJ48_421 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DJ48_421 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DJ48_421 PF13288 DXP reductoisomerase C-terminal domain DJ48_4210 PF09115 DNA polymerase III, delta subunit, C terminal DJ48_4211 PF02223 Thymidylate kinase DJ48_4212 PF01276 Orn/Lys/Arg decarboxylase, major domain DJ48_4212 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DJ48_4219 PF07441 SigmaK-factor processing regulatory protein BofA DJ48_422 PF02163 Peptidase family M50 DJ48_422 PF17820 PDZ domain DJ48_4220 PF10704 Protein of unknown function (DUF2508) DJ48_4221 PF02132 RecR protein DJ48_4221 PF13662 Toprim domain DJ48_4222 PF02575 YbaB/EbfC DNA-binding family DJ48_4223 PF12169 DNA polymerase III subunits gamma and tau domain III DJ48_4224 PF14437 MafB19-like deaminase DJ48_4225 PF00857 Isochorismatase family DJ48_4226 PF01712 Deoxynucleoside kinase DJ48_4227 PF01712 Deoxynucleoside kinase DJ48_423 PF04073 Aminoacyl-tRNA editing domain DJ48_423 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ48_423 PF03129 Anticodon binding domain DJ48_4230 PF02403 Seryl-tRNA synthetase N-terminal domain DJ48_4230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ48_4231 PF01174 SNO glutamine amidotransferase family DJ48_4232 PF01680 SOR/SNZ family DJ48_4233 PF00768 D-alanyl-D-alanine carboxypeptidase DJ48_4233 PF07943 Penicillin-binding protein 5, C-terminal domain DJ48_4234 PF00571 CBS domain DJ48_4234 PF00478 IMP dehydrogenase / GMP reductase domain DJ48_4235 PF14175 YaaC-like Protein DJ48_424 PF14579 Helix-hairpin-helix motif DJ48_424 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DJ48_424 PF07733 Bacterial DNA polymerase III alpha NTPase domain DJ48_424 PF11490 DNA polymerase III polC-type N-terminus II DJ48_424 PF14480 DNA polymerase III polC-type N-terminus I DJ48_424 PF02811 PHP domain DJ48_424 PF00929 Exonuclease DJ48_4242 PF03989 DNA gyrase C-terminal domain, beta-propeller DJ48_4242 PF00521 DNA gyrase/topoisomerase IV, subunit A DJ48_4243 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_4243 PF00204 DNA gyrase B DJ48_4243 PF01751 Toprim domain DJ48_4243 PF00986 DNA gyrase B subunit, carboxyl terminus DJ48_4244 PF02463 RecF/RecN/SMC N terminal domain DJ48_4246 PF02767 DNA polymerase III beta subunit, central domain DJ48_4246 PF02768 DNA polymerase III beta subunit, C-terminal domain DJ48_4246 PF00712 DNA polymerase III beta subunit, N-terminal domain DJ48_4247 PF00308 Bacterial dnaA protein DJ48_4247 PF08299 Bacterial dnaA protein helix-turn-helix DJ48_4247 PF11638 DnaA N-terminal domain DJ48_4248 PF00468 Ribosomal protein L34 DJ48_4249 PF00825 Ribonuclease P DJ48_425 PF17384 RimP C-terminal SH3 domain DJ48_425 PF02576 RimP N-terminal domain DJ48_4250 PF02096 60Kd inner membrane protein DJ48_4251 PF01424 R3H domain DJ48_4251 PF14804 Jag N-terminus DJ48_4252 PF10396 GTP-binding protein TrmE N-terminus DJ48_4252 PF12631 MnmE helical domain DJ48_4252 PF01926 50S ribosome-binding GTPase DJ48_4253 PF13932 GidA associated domain DJ48_4253 PF01134 Glucose inhibited division protein A DJ48_4254 PF02527 rRNA small subunit methyltransferase G DJ48_4255 PF17762 HTH domain found in ParB protein DJ48_4255 PF02195 ParB-like nuclease domain DJ48_4256 PF13614 AAA domain DJ48_4257 PF02195 ParB-like nuclease domain DJ48_4257 PF17762 HTH domain found in ParB protein DJ48_4258 PF06866 Protein of unknown function (DUF1256) DJ48_4259 PF00924 Mechanosensitive ion channel DJ48_426 PF13184 NusA-like KH domain DJ48_426 PF00575 S1 RNA binding domain DJ48_426 PF08529 NusA N-terminal domain DJ48_4260 PF06107 Bacterial protein of unknown function (DUF951) DJ48_4261 PF06071 Protein of unknown function (DUF933) DJ48_4261 PF01926 50S ribosome-binding GTPase DJ48_4262 PF01250 Ribosomal protein S6 DJ48_4263 PF00436 Single-strand binding protein family DJ48_4264 PF01084 Ribosomal protein S18 DJ48_4265 PF09991 Predicted membrane protein (DUF2232) DJ48_4266 PF01368 DHH family DJ48_4266 PF02272 DHHA1 domain DJ48_4267 PF01281 Ribosomal protein L9, N-terminal domain DJ48_4267 PF03948 Ribosomal protein L9, C-terminal domain DJ48_4268 PF03796 DnaB-like helicase C terminal domain DJ48_4268 PF00772 DnaB-like helicase N terminal domain DJ48_4269 PF00709 Adenylosuccinate synthetase DJ48_427 PF04296 Protein of unknown function (DUF448) DJ48_4274 PF00486 Transcriptional regulatory protein, C terminal DJ48_4274 PF00072 Response regulator receiver domain DJ48_4275 PF00512 His Kinase A (phospho-acceptor) domain DJ48_4275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_4275 PF00672 HAMP domain DJ48_4275 PF13426 PAS domain DJ48_4276 PF07435 YycH protein DJ48_4277 PF09648 YycH protein DJ48_4278 PF00753 Metallo-beta-lactamase superfamily DJ48_4279 PF13180 PDZ domain DJ48_428 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DJ48_4281 PF02590 Predicted SPOUT methyltransferase DJ48_4283 PF08439 Oligopeptidase F DJ48_4283 PF01432 Peptidase family M3 DJ48_4284 PF00478 IMP dehydrogenase / GMP reductase domain DJ48_4286 PF03880 DbpA RNA binding domain DJ48_4286 PF00270 DEAD/DEAH box helicase DJ48_4286 PF00271 Helicase conserved C-terminal domain DJ48_4288 PF03006 Haemolysin-III related DJ48_4289 PF16363 GDP-mannose 4,6 dehydratase DJ48_429 PF11987 Translation-initiation factor 2 DJ48_429 PF00009 Elongation factor Tu GTP binding domain DJ48_429 PF04760 Translation initiation factor IF-2, N-terminal region DJ48_4291 PF02293 AmiS/UreI family transporter DJ48_4293 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DJ48_4293 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DJ48_4294 PF02898 Nitric oxide synthase, oxygenase domain DJ48_4295 PF02028 BCCT, betaine/carnitine/choline family transporter DJ48_4296 PF07690 Major Facilitator Superfamily DJ48_4297 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_4297 PF13492 GAF domain DJ48_4297 PF07694 5TMR of 5TMR-LYT DJ48_4297 PF06580 Histidine kinase DJ48_4298 PF04397 LytTr DNA-binding domain DJ48_4298 PF00072 Response regulator receiver domain DJ48_4299 PF03788 LrgA family DJ48_43 PF00696 Amino acid kinase family DJ48_430 PF04456 Protein of unknown function (DUF503) DJ48_4300 PF04172 LrgB-like family DJ48_4301 PF01594 AI-2E family transporter DJ48_4302 PF01641 SelR domain DJ48_4302 PF01625 Peptide methionine sulfoxide reductase DJ48_4303 PF00873 AcrB/AcrD/AcrF family DJ48_4304 PF00440 Bacterial regulatory proteins, tetR family DJ48_4305 PF00535 Glycosyl transferase family 2 DJ48_431 PF02033 Ribosome-binding factor A DJ48_4310 PF00005 ABC transporter DJ48_4310 PF12848 ABC transporter DJ48_4311 PF00535 Glycosyl transferase family 2 DJ48_4313 PF03061 Thioesterase superfamily DJ48_4315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ48_4316 PF03458 UPF0126 domain DJ48_4319 PF03808 Glycosyl transferase WecB/TagA/CpsF family DJ48_432 PF01509 TruB family pseudouridylate synthase (N terminal domain) DJ48_432 PF16198 tRNA pseudouridylate synthase B C-terminal domain DJ48_4320 PF07690 Major Facilitator Superfamily DJ48_4321 PF00072 Response regulator receiver domain DJ48_4321 PF04397 LytTr DNA-binding domain DJ48_4322 PF13722 5TM C-terminal transporter carbon starvation CstA DJ48_4322 PF02554 Carbon starvation protein CstA DJ48_4323 PF04328 Selenoprotein, putative DJ48_4324 PF07694 5TMR of 5TMR-LYT DJ48_4324 PF00990 Diguanylate cyclase, GGDEF domain DJ48_4325 PF08543 Phosphomethylpyrimidine kinase DJ48_4326 PF13185 GAF domain DJ48_4326 PF07730 Histidine kinase DJ48_4327 PF07730 Histidine kinase DJ48_4327 PF13185 GAF domain DJ48_4328 PF00072 Response regulator receiver domain DJ48_4328 PF00196 Bacterial regulatory proteins, luxR family DJ48_4329 PF02525 Flavodoxin-like fold DJ48_433 PF01687 Riboflavin kinase DJ48_433 PF06574 FAD synthetase DJ48_4330 PF00027 Cyclic nucleotide-binding domain DJ48_4331 PF13419 Haloacid dehalogenase-like hydrolase DJ48_4333 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ48_4334 PF04204 Homoserine O-succinyltransferase DJ48_4335 PF00742 Homoserine dehydrogenase DJ48_4335 PF03447 Homoserine dehydrogenase, NAD binding domain DJ48_4335 PF01842 ACT domain DJ48_4337 PF00356 Bacterial regulatory proteins, lacI family DJ48_4337 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJ48_4338 PF13472 GDSL-like Lipase/Acylhydrolase family DJ48_4339 PF00005 ABC transporter DJ48_434 PF00312 Ribosomal protein S15 DJ48_4340 PF12679 ABC-2 family transporter protein DJ48_4341 PF03167 Uracil DNA glycosylase superfamily DJ48_4342 PF12823 Domain of unknown function (DUF3817) DJ48_4344 PF00860 Permease family DJ48_4345 PF02254 TrkA-N domain DJ48_4345 PF07885 Ion channel DJ48_4347 PF04241 Protein of unknown function (DUF423) DJ48_4348 PF09671 Spore coat protein (Spore_GerQ) DJ48_4349 PF07486 Cell Wall Hydrolase DJ48_435 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DJ48_435 PF00013 KH domain DJ48_435 PF00575 S1 RNA binding domain DJ48_435 PF03725 3' exoribonuclease family, domain 2 DJ48_435 PF01138 3' exoribonuclease family, domain 1 DJ48_4350 PF00768 D-alanyl-D-alanine carboxypeptidase DJ48_4350 PF07943 Penicillin-binding protein 5, C-terminal domain DJ48_4352 PF01515 Phosphate acetyl/butaryl transferase DJ48_4353 PF03099 Biotin/lipoate A/B protein ligase family DJ48_4356 PF07293 Protein of unknown function (DUF1450) DJ48_4357 PF01032 FecCD transport family DJ48_4358 PF01032 FecCD transport family DJ48_4359 PF00005 ABC transporter DJ48_436 PF01522 Polysaccharide deacetylase DJ48_4360 PF01497 Periplasmic binding protein DJ48_4361 PF01966 HD domain DJ48_4362 PF01361 Tautomerase enzyme DJ48_4363 PF02163 Peptidase family M50 DJ48_4364 PF08741 YwhD family DJ48_4365 PF00912 Transglycosylase DJ48_4365 PF00905 Penicillin binding protein transpeptidase domain DJ48_4366 PF03009 Glycerophosphoryl diester phosphodiesterase family DJ48_4367 PF13411 MerR HTH family regulatory protein DJ48_4368 PF07690 Major Facilitator Superfamily DJ48_4369 PF17284 Spermidine synthase tetramerisation domain DJ48_437 PF05193 Peptidase M16 inactive domain DJ48_437 PF00675 Insulinase (Peptidase family M16) DJ48_4370 PF00491 Arginase family DJ48_4373 PF17676 LD-carboxypeptidase C-terminal domain DJ48_4373 PF02016 LD-carboxypeptidase N-terminal domain DJ48_4374 PF09148 Domain of unknown function (DUF1934) DJ48_4375 PF03485 Arginyl tRNA synthetase N terminal domain DJ48_4375 PF00750 tRNA synthetases class I (R) DJ48_4375 PF05746 DALR anticodon binding domain DJ48_4376 PF08281 Sigma-70, region 4 DJ48_4376 PF04542 Sigma-70 region 2 DJ48_438 PF05239 PRC-barrel domain DJ48_4380 PF04389 Peptidase family M28 DJ48_4380 PF02225 PA domain DJ48_4381 PF01473 Putative cell wall binding repeat DJ48_4381 PF02324 Glycosyl hydrolase family 70 DJ48_4383 PF00557 Metallopeptidase family M24 DJ48_4384 PF00005 ABC transporter DJ48_4386 PF07730 Histidine kinase DJ48_4386 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_4387 PF00196 Bacterial regulatory proteins, luxR family DJ48_4387 PF00072 Response regulator receiver domain DJ48_439 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DJ48_439 PF16924 Dipicolinate synthase subunit A N-terminal domain DJ48_4391 PF03707 Bacterial signalling protein N terminal repeat DJ48_4391 PF00990 Diguanylate cyclase, GGDEF domain DJ48_4391 PF00563 EAL domain DJ48_4392 PF03851 UV-endonuclease UvdE DJ48_4393 PF13091 PLD-like domain DJ48_4394 PF02754 Cysteine-rich domain DJ48_4394 PF13183 4Fe-4S dicluster domain DJ48_4395 PF02803 Thiolase, C-terminal domain DJ48_4395 PF00108 Thiolase, N-terminal domain DJ48_4396 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJ48_4396 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJ48_4397 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ48_4397 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ48_4397 PF02770 Acyl-CoA dehydrogenase, middle domain DJ48_4398 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ48_4398 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ48_4398 PF02770 Acyl-CoA dehydrogenase, middle domain DJ48_44 PF00202 Aminotransferase class-III DJ48_440 PF02441 Flavoprotein DJ48_4400 PF05066 HB1, ASXL, restriction endonuclease HTH domain DJ48_4401 PF00117 Glutamine amidotransferase class-I DJ48_4401 PF06418 CTP synthase N-terminus DJ48_4402 PF10740 Domain of unknown function (DUF2529) DJ48_4403 PF00072 Response regulator receiver domain DJ48_4404 PF00072 Response regulator receiver domain DJ48_4405 PF01116 Fructose-bisphosphate aldolase class-II DJ48_4406 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DJ48_4407 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DJ48_4408 PF07497 Rho termination factor, RNA-binding domain DJ48_4408 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJ48_4408 PF07498 Rho termination factor, N-terminal domain DJ48_4409 PF01197 Ribosomal protein L31 DJ48_441 PF01118 Semialdehyde dehydrogenase, NAD binding domain DJ48_441 PF02774 Semialdehyde dehydrogenase, dimerisation domain DJ48_4410 PF00265 Thymidine kinase DJ48_4411 PF00472 RF-1 domain DJ48_4411 PF03462 PCRF domain DJ48_4412 PF17827 PrmC N-terminal domain DJ48_4412 PF13847 Methyltransferase domain DJ48_4413 PF09551 Stage II sporulation protein R (spore_II_R) DJ48_4415 PF01300 Telomere recombination DJ48_4415 PF03481 Putative GTP-binding controlling metal-binding DJ48_4416 PF02659 Putative manganese efflux pump DJ48_4418 PF01613 Flavin reductase like domain DJ48_4419 PF07681 DoxX DJ48_442 PF13840 ACT domain DJ48_442 PF00696 Amino acid kinase family DJ48_4420 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DJ48_4421 PF01451 Low molecular weight phosphotyrosine protein phosphatase DJ48_4422 PF02502 Ribose/Galactose Isomerase DJ48_4423 PF04260 Protein of unknown function (DUF436) DJ48_4424 PF00464 Serine hydroxymethyltransferase DJ48_4427 PF03899 ATP synthase I chain DJ48_4428 PF00119 ATP synthase A chain DJ48_4429 PF00137 ATP synthase subunit C DJ48_443 PF00701 Dihydrodipicolinate synthetase family DJ48_4430 PF00430 ATP synthase B/B' CF(0) DJ48_4431 PF00213 ATP synthase delta (OSCP) subunit DJ48_4432 PF02874 ATP synthase alpha/beta family, beta-barrel domain DJ48_4432 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJ48_4432 PF00306 ATP synthase alpha/beta chain, C terminal domain DJ48_4433 PF00231 ATP synthase DJ48_4434 PF02874 ATP synthase alpha/beta family, beta-barrel domain DJ48_4434 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJ48_4435 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DJ48_4435 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DJ48_4438 PF00563 EAL domain DJ48_4438 PF00990 Diguanylate cyclase, GGDEF domain DJ48_4438 PF03707 Bacterial signalling protein N terminal repeat DJ48_4439 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DJ48_444 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DJ48_444 PF00753 Metallo-beta-lactamase superfamily DJ48_444 PF17770 Ribonuclease J C-terminal domain DJ48_4440 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DJ48_4441 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DJ48_4442 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DJ48_4443 PF00146 NADH dehydrogenase DJ48_4445 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DJ48_4446 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DJ48_4447 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DJ48_4447 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DJ48_4447 PF00361 Proton-conducting membrane transporter DJ48_4448 PF00361 Proton-conducting membrane transporter DJ48_4449 PF00361 Proton-conducting membrane transporter DJ48_445 PF00574 Clp protease DJ48_4450 PF06612 Protein of unknown function (DUF1146) DJ48_4452 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DJ48_4453 PF08486 Stage II sporulation protein DJ48_4454 PF04397 LytTr DNA-binding domain DJ48_4454 PF00072 Response regulator receiver domain DJ48_4455 PF00005 ABC transporter DJ48_4457 PF01551 Peptidase family M23 DJ48_4459 PF12116 Stage III sporulation protein D DJ48_446 PF14035 YlzJ-like protein DJ48_4467 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ48_4467 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ48_4467 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ48_4468 PF01061 ABC-2 type transporter DJ48_4469 PF08239 Bacterial SH3 domain DJ48_4469 PF00005 ABC transporter DJ48_447 PF17854 FtsK alpha domain DJ48_447 PF01580 FtsK/SpoIIIE family DJ48_447 PF09397 Ftsk gamma domain DJ48_4470 PF02350 UDP-N-acetylglucosamine 2-epimerase DJ48_4471 PF07977 FabA-like domain DJ48_4473 PF03816 Cell envelope-related transcriptional attenuator domain DJ48_4474 PF16363 GDP-mannose 4,6 dehydratase DJ48_4475 PF00486 Transcriptional regulatory protein, C terminal DJ48_4475 PF00072 Response regulator receiver domain DJ48_4476 PF16736 Single Cache-like DJ48_4476 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_4476 PF00512 His Kinase A (phospho-acceptor) domain DJ48_4476 PF00989 PAS fold DJ48_4479 PF07690 Major Facilitator Superfamily DJ48_448 PF00392 Bacterial regulatory proteins, gntR family DJ48_448 PF07702 UTRA domain DJ48_4483 PF00005 ABC transporter DJ48_4484 PF12704 MacB-like periplasmic core domain DJ48_4484 PF02687 FtsX-like permease family DJ48_4485 PF04893 Yip1 domain DJ48_4486 PF04542 Sigma-70 region 2 DJ48_4486 PF04545 Sigma-70, region 4 DJ48_4492 PF00176 SNF2 family N-terminal domain DJ48_4492 PF00271 Helicase conserved C-terminal domain DJ48_4492 PF12419 SNF2 Helicase protein DJ48_4493 PF04434 SWIM zinc finger DJ48_4498 PF06725 3D domain DJ48_4498 PF01476 LysM domain DJ48_4499 PF02028 BCCT, betaine/carnitine/choline family transporter DJ48_45 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DJ48_45 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DJ48_4503 PF07662 Na+ dependent nucleoside transporter C-terminus DJ48_4503 PF01773 Na+ dependent nucleoside transporter N-terminus DJ48_4504 PF00877 NlpC/P60 family DJ48_4504 PF01476 LysM domain DJ48_4506 PF01063 Amino-transferase class IV DJ48_4507 PF00884 Sulfatase DJ48_4510 PF09988 Uncharacterized metal-binding protein (DUF2227) DJ48_4512 PF02652 L-lactate permease DJ48_4513 PF01964 Radical SAM ThiC family DJ48_4513 PF13667 ThiC-associated domain DJ48_4514 PF02040 Arsenical pump membrane protein DJ48_4515 PF02322 Cytochrome bd terminal oxidase subunit II DJ48_4516 PF01654 Cytochrome bd terminal oxidase subunit I DJ48_4521 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ48_4521 PF03466 LysR substrate binding domain DJ48_4523 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_4525 PF00375 Sodium:dicarboxylate symporter family DJ48_4526 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJ48_4527 PF02378 Phosphotransferase system, EIIC DJ48_4528 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DJ48_4529 PF02675 S-adenosylmethionine decarboxylase DJ48_4531 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJ48_4532 PF02378 Phosphotransferase system, EIIC DJ48_4533 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DJ48_4534 PF02056 Family 4 glycosyl hydrolase DJ48_4534 PF11975 Family 4 glycosyl hydrolase C-terminal domain DJ48_4535 PF04794 YdjC-like protein DJ48_4536 PF02417 Chromate transporter DJ48_4538 PF03610 PTS system fructose IIA component DJ48_4538 PF00874 PRD domain DJ48_4538 PF00158 Sigma-54 interaction domain DJ48_454 PF05193 Peptidase M16 inactive domain DJ48_4540 PF00953 Glycosyl transferase family 4 DJ48_4541 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ48_4541 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ48_4541 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ48_4542 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ48_4542 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ48_4542 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ48_4543 PF02350 UDP-N-acetylglucosamine 2-epimerase DJ48_4544 PF03816 Cell envelope-related transcriptional attenuator domain DJ48_4545 PF01205 Uncharacterized protein family UPF0029 DJ48_4545 PF09186 Domain of unknown function (DUF1949) DJ48_4546 PF02645 Uncharacterised protein, DegV family COG1307 DJ48_4547 PF01638 HxlR-like helix-turn-helix DJ48_4548 PF00877 NlpC/P60 family DJ48_4548 PF01476 LysM domain DJ48_4549 PF00271 Helicase conserved C-terminal domain DJ48_4549 PF04851 Type III restriction enzyme, res subunit DJ48_455 PF00675 Insulinase (Peptidase family M16) DJ48_455 PF05193 Peptidase M16 inactive domain DJ48_4551 PF00313 'Cold-shock' DNA-binding domain DJ48_4552 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DJ48_4552 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DJ48_4553 PF07516 SecA Wing and Scaffold domain DJ48_4553 PF02810 SEC-C motif DJ48_4553 PF07517 SecA DEAD-like domain DJ48_4553 PF01043 SecA preprotein cross-linking domain DJ48_4554 PF03462 PCRF domain DJ48_4554 PF00472 RF-1 domain DJ48_4555 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DJ48_4556 PF00005 ABC transporter DJ48_4557 PF18075 FtsX extracellular domain DJ48_4557 PF02687 FtsX-like permease family DJ48_4558 PF01471 Putative peptidoglycan binding domain DJ48_4558 PF03572 Peptidase family S41 DJ48_4558 PF17820 PDZ domain DJ48_4559 PF17820 PDZ domain DJ48_4560 PF00005 ABC transporter DJ48_4560 PF00664 ABC transporter transmembrane region DJ48_4561 PF01906 Putative heavy-metal-binding DJ48_4563 PF03358 NADPH-dependent FMN reductase DJ48_4564 PF00376 MerR family regulatory protein DJ48_4564 PF09278 MerR, DNA binding DJ48_4565 PF03466 LysR substrate binding domain DJ48_4565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ48_4566 PF03601 Conserved hypothetical protein 698 DJ48_457 PF11588 Protein of unknown function (DUF3243) DJ48_4571 PF07739 TipAS antibiotic-recognition domain DJ48_4571 PF13411 MerR HTH family regulatory protein DJ48_4574 PF07282 Putative transposase DNA-binding domain DJ48_4574 PF01385 Probable transposase DJ48_4574 PF12323 Helix-turn-helix domain DJ48_4575 PF17757 UvrB interaction domain DJ48_4575 PF12344 Ultra-violet resistance protein B DJ48_4575 PF02151 UvrB/uvrC motif DJ48_4575 PF04851 Type III restriction enzyme, res subunit DJ48_4575 PF00271 Helicase conserved C-terminal domain DJ48_4576 PF17755 UvrA DNA-binding domain DJ48_4576 PF17760 UvrA interaction domain DJ48_4576 PF00005 ABC transporter DJ48_4577 PF17760 UvrA interaction domain DJ48_4577 PF17755 UvrA DNA-binding domain DJ48_4577 PF00005 ABC transporter DJ48_4579 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DJ48_458 PF11868 Protein of unknown function (DUF3388) DJ48_4580 PF02603 HPr Serine kinase N terminus DJ48_4580 PF07475 HPr Serine kinase C-terminal domain DJ48_4581 PF01790 Prolipoprotein diacylglyceryl transferase DJ48_4582 PF13419 Haloacid dehalogenase-like hydrolase DJ48_4583 PF14602 Hexapeptide repeat of succinyl-transferase DJ48_4585 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_4587 PF00293 NUDIX domain DJ48_4588 PF03668 P-loop ATPase protein family DJ48_4589 PF01933 Uncharacterised protein family UPF0052 DJ48_459 PF13464 Domain of unknown function (DUF4115) DJ48_4590 PF10298 WhiA N-terminal LAGLIDADG-like domain DJ48_4590 PF14527 WhiA LAGLIDADG-like domain DJ48_4590 PF02650 WhiA C-terminal HTH domain DJ48_4591 PF00381 PTS HPr component phosphorylation site DJ48_4592 PF00574 Clp protease DJ48_4593 PF04239 Protein of unknown function (DUF421) DJ48_4595 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DJ48_4596 PF07451 Stage V sporulation protein AD (SpoVAD) DJ48_4597 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DJ48_460 PF01066 CDP-alcohol phosphatidyltransferase DJ48_4601 PF00309 Sigma-54 factor, Activator interacting domain (AID) DJ48_4601 PF04963 Sigma-54 factor, core binding domain DJ48_4601 PF04552 Sigma-54, DNA binding domain DJ48_4603 PF04198 Putative sugar-binding domain DJ48_4604 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ48_4604 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DJ48_4605 PF00162 Phosphoglycerate kinase DJ48_4606 PF00121 Triosephosphate isomerase DJ48_4607 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DJ48_4607 PF01676 Metalloenzyme superfamily DJ48_4608 PF03952 Enolase, N-terminal domain DJ48_4608 PF00113 Enolase, C-terminal TIM barrel domain DJ48_4609 PF00589 Phage integrase family DJ48_4609 PF02899 Phage integrase, N-terminal SAM-like domain DJ48_461 PF02464 Competence-damaged protein DJ48_461 PF00994 Probable molybdopterin binding domain DJ48_461 PF18146 Damage-inducible protein CinA KH domain DJ48_4613 PF04860 Phage portal protein DJ48_462 PF00154 recA bacterial DNA recombination protein DJ48_463 PF00154 recA bacterial DNA recombination protein DJ48_4630 PF01156 Inosine-uridine preferring nucleoside hydrolase DJ48_4631 PF03788 LrgA family DJ48_4632 PF04172 LrgB-like family DJ48_4633 PF03840 Preprotein translocase SecG subunit DJ48_4634 PF12146 Serine aminopeptidase, S33 DJ48_4635 PF17876 Cold shock domain DJ48_4635 PF00575 S1 RNA binding domain DJ48_4635 PF00773 RNB domain DJ48_4635 PF08206 Ribonuclease B OB domain DJ48_4636 PF01668 SmpB protein DJ48_4637 PF00486 Transcriptional regulatory protein, C terminal DJ48_4637 PF00072 Response regulator receiver domain DJ48_4639 PF01032 FecCD transport family DJ48_464 PF01966 HD domain DJ48_464 PF12072 Domain of unknown function (DUF3552) DJ48_464 PF00013 KH domain DJ48_4640 PF01032 FecCD transport family DJ48_4641 PF00005 ABC transporter DJ48_4644 PF06146 Phosphate-starvation-inducible E DJ48_4645 PF13302 Acetyltransferase (GNAT) domain DJ48_4648 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DJ48_4649 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DJ48_465 PF13277 YmdB-like protein DJ48_4651 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ48_4651 PF00672 HAMP domain DJ48_4651 PF17202 Single cache domain 3 DJ48_4653 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DJ48_4653 PF01565 FAD binding domain DJ48_4654 PF01479 S4 domain DJ48_4654 PF00579 tRNA synthetases class I (W and Y) DJ48_4655 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_4656 PF07849 Protein of unknown function (DUF1641) DJ48_4657 PF01638 HxlR-like helix-turn-helix DJ48_4658 PF07690 Major Facilitator Superfamily DJ48_4659 PF00248 Aldo/keto reductase family DJ48_466 PF04232 Stage V sporulation protein S (SpoVS) DJ48_4663 PF13460 NAD(P)H-binding DJ48_4664 PF01235 Sodium:alanine symporter family DJ48_4665 PF01235 Sodium:alanine symporter family DJ48_4666 PF01773 Na+ dependent nucleoside transporter N-terminus DJ48_4666 PF07662 Na+ dependent nucleoside transporter C-terminus DJ48_4667 PF07662 Na+ dependent nucleoside transporter C-terminus DJ48_4667 PF01773 Na+ dependent nucleoside transporter N-terminus DJ48_4669 PF04235 Protein of unknown function (DUF418) DJ48_467 PF01244 Membrane dipeptidase (Peptidase family M19) DJ48_4670 PF00210 Ferritin-like domain DJ48_4672 PF03641 Possible lysine decarboxylase DJ48_4675 PF00210 Ferritin-like domain DJ48_4676 PF01235 Sodium:alanine symporter family DJ48_4677 PF02080 TrkA-C domain DJ48_4678 PF00999 Sodium/hydrogen exchanger family DJ48_468 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DJ48_468 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DJ48_468 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DJ48_4680 PF01047 MarR family DJ48_4681 PF02678 Pirin DJ48_4681 PF17954 Quercetinase C-terminal cupin domain DJ48_4682 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ48_4682 PF01447 Thermolysin metallopeptidase, catalytic domain DJ48_4682 PF03413 Peptidase propeptide and YPEB domain DJ48_4682 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ48_4683 PF01883 Iron-sulfur cluster assembly protein DJ48_4684 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ48_4684 PF00672 HAMP domain DJ48_4684 PF02743 Cache domain DJ48_4686 PF08264 Anticodon-binding domain of tRNA DJ48_4686 PF09334 tRNA synthetases class I (M) DJ48_4688 PF00512 His Kinase A (phospho-acceptor) domain DJ48_4688 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_4688 PF00989 PAS fold DJ48_4688 PF16736 Single Cache-like DJ48_4689 PF00072 Response regulator receiver domain DJ48_4689 PF00486 Transcriptional regulatory protein, C terminal DJ48_469 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ48_4690 PF03734 L,D-transpeptidase catalytic domain DJ48_4690 PF17969 L,D-transpeptidase C-terminal domain DJ48_4692 PF09335 SNARE associated Golgi protein DJ48_4699 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ48_4699 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ48_470 PF00919 Uncharacterized protein family UPF0004 DJ48_470 PF04055 Radical SAM superfamily DJ48_470 PF01938 TRAM domain DJ48_4701 PF02096 60Kd inner membrane protein DJ48_4703 PF13520 Amino acid permease DJ48_4704 PF07690 Major Facilitator Superfamily DJ48_4708 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ48_4708 PF00672 HAMP domain DJ48_4708 PF02743 Cache domain DJ48_4709 PF01910 Thiamine-binding protein DJ48_471 PF06133 Control of competence regulator ComK, YlbF/YmcA DJ48_4710 PF10835 Protein of unknown function (DUF2573) DJ48_4711 PF01619 Proline dehydrogenase DJ48_4712 PF07943 Penicillin-binding protein 5, C-terminal domain DJ48_4712 PF00768 D-alanyl-D-alanine carboxypeptidase DJ48_4713 PF14115 YuzL-like protein DJ48_4714 PF00378 Enoyl-CoA hydratase/isomerase DJ48_4714 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJ48_4714 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJ48_4715 PF02803 Thiolase, C-terminal domain DJ48_4715 PF00108 Thiolase, N-terminal domain DJ48_4716 PF02770 Acyl-CoA dehydrogenase, middle domain DJ48_4716 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ48_4716 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ48_4717 PF00753 Metallo-beta-lactamase superfamily DJ48_4718 PF00440 Bacterial regulatory proteins, tetR family DJ48_4718 PF13305 Tetracyclin repressor-like, C-terminal domain DJ48_472 PF10628 Outer spore coat protein E (CotE) DJ48_4723 PF00056 lactate/malate dehydrogenase, NAD binding domain DJ48_4723 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DJ48_473 PF01624 MutS domain I DJ48_473 PF05188 MutS domain II DJ48_473 PF00488 MutS domain V DJ48_473 PF05190 MutS family domain IV DJ48_473 PF05192 MutS domain III DJ48_4732 PF03960 ArsC family DJ48_4733 PF01597 Glycine cleavage H-protein DJ48_4734 PF01751 Toprim domain DJ48_4735 PF00085 Thioredoxin DJ48_4737 PF09383 NIL domain DJ48_4737 PF00005 ABC transporter DJ48_4738 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_4739 PF03180 NLPA lipoprotein DJ48_474 PF08676 MutL C terminal dimerisation domain DJ48_474 PF01119 DNA mismatch repair protein, C-terminal domain DJ48_4740 PF03180 NLPA lipoprotein DJ48_4741 PF00005 ABC transporter DJ48_4742 PF01458 Uncharacterized protein family (UPF0051) DJ48_4743 PF00266 Aminotransferase class-V DJ48_4744 PF01592 NifU-like N terminal domain DJ48_4745 PF01458 Uncharacterized protein family (UPF0051) DJ48_4746 PF04892 VanZ like family DJ48_4747 PF03551 Transcriptional regulator PadR-like family DJ48_4748 PF02872 5'-nucleotidase, C-terminal domain DJ48_4749 PF08827 Domain of unknown function (DUF1805) DJ48_475 PF00005 ABC transporter DJ48_4751 PF01551 Peptidase family M23 DJ48_4752 PF04055 Radical SAM superfamily DJ48_4752 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DJ48_4756 PF10086 YhfC intramembrane metalloprotease DJ48_4757 PF13411 MerR HTH family regulatory protein DJ48_4757 PF07739 TipAS antibiotic-recognition domain DJ48_4758 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DJ48_4759 PF06265 Protein of unknown function (DUF1027) DJ48_4762 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DJ48_4763 PF01934 Protein of unknown function DUF86 DJ48_4765 PF13344 Haloacid dehalogenase-like hydrolase DJ48_4766 PF02525 Flavodoxin-like fold DJ48_4768 PF04608 Phosphatidylglycerophosphatase A DJ48_4771 PF01106 NifU-like domain DJ48_4772 PF07315 Protein of unknown function (DUF1462) DJ48_478 PF00072 Response regulator receiver domain DJ48_478 PF00486 Transcriptional regulatory protein, C terminal DJ48_4780 PF03831 PhnA domain DJ48_4780 PF08274 PhnA Zinc-Ribbon DJ48_4781 PF03649 Uncharacterised protein family (UPF0014) DJ48_4782 PF00664 ABC transporter transmembrane region DJ48_4782 PF03412 Peptidase C39 family DJ48_4782 PF00005 ABC transporter DJ48_4783 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_4784 PF07293 Protein of unknown function (DUF1450) DJ48_4785 PF01678 Diaminopimelate epimerase DJ48_4786 PF01521 Iron-sulphur cluster biosynthesis DJ48_4789 PF04463 Protein of unknown function (DUF523) DJ48_479 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_479 PF00512 His Kinase A (phospho-acceptor) domain DJ48_4793 PF06445 GyrI-like small molecule binding domain DJ48_4795 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_4796 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ48_4797 PF00293 NUDIX domain DJ48_4797 PF13344 Haloacid dehalogenase-like hydrolase DJ48_4799 PF06725 3D domain DJ48_48 PF13404 AsnC-type helix-turn-helix domain DJ48_48 PF01037 Lrp/AsnC ligand binding domain DJ48_480 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DJ48_4800 PF00883 Cytosol aminopeptidase family, catalytic domain DJ48_4800 PF02789 Cytosol aminopeptidase family, N-terminal domain DJ48_4801 PF02457 DisA bacterial checkpoint controller nucleotide-binding DJ48_4801 PF10372 Bacterial membrane-spanning protein N-terminus DJ48_4802 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DJ48_4802 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DJ48_4802 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DJ48_4802 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DJ48_4803 PF00483 Nucleotidyl transferase DJ48_4805 PF02632 BioY family DJ48_4807 PF03061 Thioesterase superfamily DJ48_4808 PF03129 Anticodon binding domain DJ48_4808 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ48_4811 PF03600 Citrate transporter DJ48_4812 PF00929 Exonuclease DJ48_4813 PF08810 Kinase associated protein B DJ48_4816 PF00155 Aminotransferase class I and II DJ48_4818 PF00561 alpha/beta hydrolase fold DJ48_4818 PF08386 TAP-like protein DJ48_4819 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ48_4819 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ48_482 PF00350 Dynamin family DJ48_4820 PF01037 Lrp/AsnC ligand binding domain DJ48_4821 PF00155 Aminotransferase class I and II DJ48_4822 PF00575 S1 RNA binding domain DJ48_4823 PF04070 Domain of unknown function (DUF378) DJ48_4824 PF00342 Phosphoglucose isomerase DJ48_4825 PF02254 TrkA-N domain DJ48_4825 PF07885 Ion channel DJ48_4826 PF08868 YugN-like family DJ48_4827 PF02308 MgtC family DJ48_483 PF00884 Sulfatase DJ48_4835 PF05697 Bacterial trigger factor protein (TF) DJ48_4835 PF05698 Bacterial trigger factor protein (TF) C-terminus DJ48_484 PF03275 UDP-galactopyranose mutase DJ48_485 PF07486 Cell Wall Hydrolase DJ48_4854 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DJ48_4854 PF00056 lactate/malate dehydrogenase, NAD binding domain DJ48_4855 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DJ48_4855 PF00128 Alpha amylase, catalytic domain DJ48_4855 PF02806 Alpha amylase, C-terminal all-beta domain DJ48_4856 PF00483 Nucleotidyl transferase DJ48_4857 PF00483 Nucleotidyl transferase DJ48_4858 PF00534 Glycosyl transferases group 1 DJ48_4858 PF08323 Starch synthase catalytic domain DJ48_4859 PF00343 Carbohydrate phosphorylase DJ48_486 PF00082 Subtilase family DJ48_4863 PF00313 'Cold-shock' DNA-binding domain DJ48_4864 PF01258 Prokaryotic dksA/traR C4-type zinc finger DJ48_4865 PF01040 UbiA prenyltransferase family DJ48_4866 PF00425 chorismate binding enzyme DJ48_4867 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ48_4867 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ48_4867 PF16582 Middle domain of thiamine pyrophosphate DJ48_4868 PF00561 alpha/beta hydrolase fold DJ48_4869 PF00378 Enoyl-CoA hydratase/isomerase DJ48_487 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DJ48_4870 PF00501 AMP-binding enzyme DJ48_4870 PF13193 AMP-binding enzyme C-terminal domain DJ48_4871 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ48_4871 PF13378 Enolase C-terminal domain-like DJ48_4872 PF00072 Response regulator receiver domain DJ48_4872 PF00486 Transcriptional regulatory protein, C terminal DJ48_4874 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_4874 PF00512 His Kinase A (phospho-acceptor) domain DJ48_4875 PF02557 D-alanyl-D-alanine carboxypeptidase DJ48_4878 PF01979 Amidohydrolase family DJ48_4879 PF03841 L-seryl-tRNA selenium transferase DJ48_488 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DJ48_4880 PF07071 KDGP aldolase DJ48_4883 PF02447 GntP family permease DJ48_4885 PF02687 FtsX-like permease family DJ48_4886 PF00005 ABC transporter DJ48_4887 PF02687 FtsX-like permease family DJ48_4888 PF02687 FtsX-like permease family DJ48_4889 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_4890 PF00072 Response regulator receiver domain DJ48_4890 PF00486 Transcriptional regulatory protein, C terminal DJ48_4891 PF06445 GyrI-like small molecule binding domain DJ48_4891 PF12833 Helix-turn-helix domain DJ48_4892 PF00005 ABC transporter DJ48_4893 PF02687 FtsX-like permease family DJ48_4894 PF00398 Ribosomal RNA adenine dimethylase DJ48_4895 PF09335 SNARE associated Golgi protein DJ48_4898 PF00248 Aldo/keto reductase family DJ48_490 PF02585 GlcNAc-PI de-N-acetylase DJ48_4902 PF00781 Diacylglycerol kinase catalytic domain DJ48_4908 PF00072 Response regulator receiver domain DJ48_4908 PF00486 Transcriptional regulatory protein, C terminal DJ48_4909 PF00512 His Kinase A (phospho-acceptor) domain DJ48_4909 PF00672 HAMP domain DJ48_4909 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_491 PF00561 alpha/beta hydrolase fold DJ48_491 PF00364 Biotin-requiring enzyme DJ48_4910 PF09515 Thiamine transporter protein (Thia_YuaJ) DJ48_4912 PF07664 Ferrous iron transport protein B C terminus DJ48_4912 PF07670 Nucleoside recognition DJ48_4912 PF02421 Ferrous iron transport protein B DJ48_4912 PF17910 FeoB cytosolic helical domain DJ48_4916 PF04012 PspA/IM30 family DJ48_492 PF00155 Aminotransferase class I and II DJ48_492 PF00392 Bacterial regulatory proteins, gntR family DJ48_4921 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ48_4921 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ48_4924 PF10676 Spore germination protein gerPA/gerPF DJ48_4925 PF02322 Cytochrome bd terminal oxidase subunit II DJ48_4926 PF01654 Cytochrome bd terminal oxidase subunit I DJ48_4927 PF01809 Putative membrane protein insertion efficiency factor DJ48_4928 PF00484 Carbonic anhydrase DJ48_4929 PF02664 S-Ribosylhomocysteinase (LuxS) DJ48_493 PF03788 LrgA family DJ48_4933 PF00293 NUDIX domain DJ48_4939 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_494 PF04172 LrgB-like family DJ48_4940 PF00005 ABC transporter DJ48_4944 PF00884 Sulfatase DJ48_4945 PF00561 alpha/beta hydrolase fold DJ48_4945 PF08386 TAP-like protein DJ48_4946 PF00989 PAS fold DJ48_4946 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_4946 PF08447 PAS fold DJ48_4946 PF00512 His Kinase A (phospho-acceptor) domain DJ48_4947 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_4947 PF00512 His Kinase A (phospho-acceptor) domain DJ48_4947 PF13188 PAS domain DJ48_4947 PF13426 PAS domain DJ48_4947 PF00989 PAS fold DJ48_4948 PF01784 NIF3 (NGG1p interacting factor 3) DJ48_495 PF10787 Uncharacterised protein from bacillus cereus group DJ48_4954 PF01293 Phosphoenolpyruvate carboxykinase DJ48_4955 PF02773 S-adenosylmethionine synthetase, C-terminal domain DJ48_4955 PF02772 S-adenosylmethionine synthetase, central domain DJ48_4955 PF00438 S-adenosylmethionine synthetase, N-terminal domain DJ48_4958 PF00994 Probable molybdopterin binding domain DJ48_4959 PF12804 MobA-like NTP transferase domain DJ48_4960 PF13439 Glycosyltransferase Family 4 DJ48_4960 PF00534 Glycosyl transferases group 1 DJ48_4961 PF01569 PAP2 superfamily DJ48_4962 PF00132 Bacterial transferase hexapeptide (six repeats) DJ48_4963 PF12146 Serine aminopeptidase, S33 DJ48_4964 PF10776 Protein of unknown function (DUF2600) DJ48_4967 PF01177 Asp/Glu/Hydantoin racemase DJ48_4969 PF13732 Domain of unknown function (DUF4162) DJ48_4969 PF00005 ABC transporter DJ48_497 PF03707 Bacterial signalling protein N terminal repeat DJ48_497 PF00990 Diguanylate cyclase, GGDEF domain DJ48_497 PF00563 EAL domain DJ48_4970 PF06962 Putative rRNA methylase DJ48_4971 PF04055 Radical SAM superfamily DJ48_4971 PF16199 Radical_SAM C-terminal domain DJ48_4972 PF10732 Protein of unknown function (DUF2524) DJ48_4974 PF04235 Protein of unknown function (DUF418) DJ48_4974 PF07786 Protein of unknown function (DUF1624) DJ48_4975 PF00005 ABC transporter DJ48_4977 PF00589 Phage integrase family DJ48_4978 PF02080 TrkA-C domain DJ48_4979 PF00999 Sodium/hydrogen exchanger family DJ48_498 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_4980 PF07690 Major Facilitator Superfamily DJ48_4981 PF00133 tRNA synthetases class I (I, L, M and V) DJ48_4981 PF08264 Anticodon-binding domain of tRNA DJ48_4981 PF13603 Leucyl-tRNA synthetase, Domain 2 DJ48_4981 PF09334 tRNA synthetases class I (M) DJ48_4986 PF03845 Spore germination protein DJ48_4987 PF03323 Bacillus/Clostridium GerA spore germination protein DJ48_4988 PF00561 alpha/beta hydrolase fold DJ48_499 PF00561 alpha/beta hydrolase fold DJ48_4990 PF00581 Rhodanese-like domain DJ48_4994 PF06463 Molybdenum Cofactor Synthesis C DJ48_4994 PF04055 Radical SAM superfamily DJ48_4995 PF00899 ThiF family DJ48_4996 PF01967 MoaC family DJ48_4997 PF00994 Probable molybdopterin binding domain DJ48_4997 PF03454 MoeA C-terminal region (domain IV) DJ48_4997 PF03453 MoeA N-terminal region (domain I and II) DJ48_4998 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DJ48_4999 PF02391 MoaE protein DJ48_5 PF05580 SpoIVB peptidase S55 DJ48_5 PF17820 PDZ domain DJ48_50 PF02872 5'-nucleotidase, C-terminal domain DJ48_50 PF00149 Calcineurin-like phosphoesterase DJ48_5002 PF06800 Sugar transport protein DJ48_5004 PF02559 CarD-like/TRCF domain DJ48_5006 PF10957 Sporulation protein Cse60 DJ48_5008 PF08327 Activator of Hsp90 ATPase homolog 1-like protein DJ48_5009 PF01022 Bacterial regulatory protein, arsR family DJ48_5011 PF07690 Major Facilitator Superfamily DJ48_5014 PF01943 Polysaccharide biosynthesis protein DJ48_5014 PF14667 Polysaccharide biosynthesis C-terminal domain DJ48_5015 PF00849 RNA pseudouridylate synthase DJ48_5015 PF01479 S4 domain DJ48_5016 PF08220 DeoR-like helix-turn-helix domain DJ48_5017 PF01546 Peptidase family M20/M25/M40 DJ48_5018 PF02834 LigT like Phosphoesterase DJ48_5019 PF00128 Alpha amylase, catalytic domain DJ48_5019 PF17999 Pullulanase N1-terminal domain DJ48_5019 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DJ48_5020 PF01636 Phosphotransferase enzyme family DJ48_5021 PF14165 YtzH-like protein DJ48_5022 PF02390 Putative methyltransferase DJ48_5023 PF00753 Metallo-beta-lactamase superfamily DJ48_5025 PF05343 M42 glutamyl aminopeptidase DJ48_5026 PF01931 Protein of unknown function DUF84 DJ48_5027 PF00085 Thioredoxin DJ48_5028 PF07285 Protein of unknown function (DUF1444) DJ48_5029 PF01588 Putative tRNA binding domain DJ48_5029 PF14794 Domain of unknown function (DUF4479) DJ48_503 PF01546 Peptidase family M20/M25/M40 DJ48_503 PF07687 Peptidase dimerisation domain DJ48_5031 PF17854 FtsK alpha domain DJ48_5031 PF01580 FtsK/SpoIIIE family DJ48_5031 PF09397 Ftsk gamma domain DJ48_5033 PF08245 Mur ligase middle domain DJ48_5033 PF02875 Mur ligase family, glutamate ligase domain DJ48_5033 PF01225 Mur ligase family, catalytic domain DJ48_5034 PF13302 Acetyltransferase (GNAT) domain DJ48_5038 PF02073 Thermophilic metalloprotease (M29) DJ48_504 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain DJ48_504 PF00730 HhH-GPD superfamily base excision DNA repair protein DJ48_5040 PF11009 Protein of unknown function (DUF2847) DJ48_5041 PF07537 CamS sex pheromone cAM373 precursor DJ48_5042 PF00356 Bacterial regulatory proteins, lacI family DJ48_5043 PF00356 Bacterial regulatory proteins, lacI family DJ48_5048 PF01741 Large-conductance mechanosensitive channel, MscL DJ48_5049 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ48_505 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DJ48_505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DJ48_5050 PF12796 Ankyrin repeats (3 copies) DJ48_5051 PF00512 His Kinase A (phospho-acceptor) domain DJ48_5051 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_5051 PF00672 HAMP domain DJ48_5051 PF13426 PAS domain DJ48_5052 PF00072 Response regulator receiver domain DJ48_5052 PF00486 Transcriptional regulatory protein, C terminal DJ48_5054 PF00850 Histone deacetylase domain DJ48_5055 PF00571 CBS domain DJ48_5056 PF00583 Acetyltransferase (GNAT) family DJ48_5057 PF00501 AMP-binding enzyme DJ48_5057 PF13193 AMP-binding enzyme C-terminal domain DJ48_5059 PF08281 Sigma-70, region 4 DJ48_5059 PF04542 Sigma-70 region 2 DJ48_506 PF12833 Helix-turn-helix domain DJ48_506 PF02805 Metal binding domain of Ada DJ48_5061 PF01479 S4 domain DJ48_5061 PF00579 tRNA synthetases class I (W and Y) DJ48_5064 PF01479 S4 domain DJ48_5064 PF00163 Ribosomal protein S4/S9 N-terminal domain DJ48_5065 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ48_5066 PF13185 GAF domain DJ48_5067 PF00440 Bacterial regulatory proteins, tetR family DJ48_5068 PF00892 EamA-like transporter family DJ48_5069 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ48_5069 PF03466 LysR substrate binding domain DJ48_507 PF03372 Endonuclease/Exonuclease/phosphatase family DJ48_5070 PF06160 Septation ring formation regulator, EzrA DJ48_5071 PF00266 Aminotransferase class-V DJ48_5072 PF02926 THUMP domain DJ48_5072 PF02568 Thiamine biosynthesis protein (ThiI) DJ48_5073 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ48_5074 PF00501 AMP-binding enzyme DJ48_5074 PF13193 AMP-binding enzyme C-terminal domain DJ48_5076 PF07969 Amidohydrolase family DJ48_5077 PF01513 ATP-NAD kinase DJ48_5079 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DJ48_5080 PF08534 Redoxin DJ48_5081 PF02384 N-6 DNA Methylase DJ48_5082 PF00871 Acetokinase family DJ48_5085 PF12787 EcsC protein family DJ48_5086 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ48_5086 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ48_509 PF01497 Periplasmic binding protein DJ48_5090 PF00764 Arginosuccinate synthase DJ48_5091 PF00206 Lyase DJ48_5091 PF14698 Argininosuccinate lyase C-terminal DJ48_5095 PF00582 Universal stress protein family DJ48_5097 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DJ48_5097 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DJ48_5099 PF01381 Helix-turn-helix DJ48_510 PF01032 FecCD transport family DJ48_5101 PF07883 Cupin domain DJ48_5102 PF12746 GNAT acetyltransferase DJ48_5108 PF11518 Protein of unknown function (DUF3221) DJ48_5109 PF01321 Creatinase/Prolidase N-terminal domain DJ48_5109 PF00557 Metallopeptidase family M24 DJ48_511 PF01032 FecCD transport family DJ48_5112 PF03061 Thioesterase superfamily DJ48_5112 PF07085 DRTGG domain DJ48_5112 PF00392 Bacterial regulatory proteins, gntR family DJ48_5112 PF00571 CBS domain DJ48_5115 PF14007 YtpI-like protein DJ48_5116 PF01368 DHH family DJ48_5116 PF02272 DHHA1 domain DJ48_5118 PF14034 Sporulation protein YtrH DJ48_5119 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DJ48_5119 PF07733 Bacterial DNA polymerase III alpha NTPase domain DJ48_5119 PF02811 PHP domain DJ48_5119 PF14579 Helix-hairpin-helix motif DJ48_5119 PF01336 OB-fold nucleic acid binding domain DJ48_512 PF00005 ABC transporter DJ48_5120 PF03949 Malic enzyme, NAD binding domain DJ48_5120 PF00390 Malic enzyme, N-terminal domain DJ48_5121 PF00392 Bacterial regulatory proteins, gntR family DJ48_5122 PF17848 Acetyl-coA carboxylase zinc finger domain DJ48_5122 PF01039 Carboxyl transferase domain DJ48_5123 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DJ48_5124 PF00365 Phosphofructokinase DJ48_5125 PF02887 Pyruvate kinase, alpha/beta domain DJ48_5125 PF00391 PEP-utilising enzyme, mobile domain DJ48_5125 PF00224 Pyruvate kinase, barrel domain DJ48_5126 PF04186 FxsA cytoplasmic membrane protein DJ48_5127 PF01594 AI-2E family transporter DJ48_5128 PF04284 Protein of unknown function (DUF441) DJ48_5129 PF00285 Citrate synthase, C-terminal domain DJ48_513 PF00756 Putative esterase DJ48_5130 PF00180 Isocitrate/isopropylmalate dehydrogenase DJ48_5131 PF00056 lactate/malate dehydrogenase, NAD binding domain DJ48_5131 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DJ48_5134 PF00072 Response regulator receiver domain DJ48_5134 PF00486 Transcriptional regulatory protein, C terminal DJ48_5135 PF16736 Single Cache-like DJ48_5135 PF00989 PAS fold DJ48_5135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_5135 PF00512 His Kinase A (phospho-acceptor) domain DJ48_5136 PF00476 DNA polymerase family A DJ48_5136 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DJ48_5136 PF01367 5'-3' exonuclease, C-terminal SAM fold DJ48_5137 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DJ48_5137 PF06827 Zinc finger found in FPG and IleRS DJ48_5137 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DJ48_5138 PF02659 Putative manganese efflux pump DJ48_5139 PF01121 Dephospho-CoA kinase DJ48_5140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ48_5140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DJ48_5141 PF02675 S-adenosylmethionine decarboxylase DJ48_5142 PF03477 ATP cone domain DJ48_5143 PF07261 Replication initiation and membrane attachment DJ48_5144 PF01695 IstB-like ATP binding protein DJ48_5144 PF07319 Primosomal protein DnaI N-terminus DJ48_5145 PF08812 YtxC-like family DJ48_5146 PF03129 Anticodon binding domain DJ48_5146 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ48_5146 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ48_5146 PF02824 TGS domain DJ48_5147 PF05198 Translation initiation factor IF-3, N-terminal domain DJ48_5147 PF00707 Translation initiation factor IF-3, C-terminal domain DJ48_5148 PF01632 Ribosomal protein L35 DJ48_5149 PF00453 Ribosomal protein L20 DJ48_515 PF02583 Metal-sensitive transcriptional repressor DJ48_5151 PF05343 M42 glutamyl aminopeptidase DJ48_5152 PF16859 Tetracyclin repressor-like, C-terminal domain DJ48_5152 PF00440 Bacterial regulatory proteins, tetR family DJ48_5154 PF07690 Major Facilitator Superfamily DJ48_5159 PF01966 HD domain DJ48_516 PF00403 Heavy-metal-associated domain DJ48_5160 PF14098 Small, acid-soluble spore protein I DJ48_5161 PF00588 SpoU rRNA Methylase family DJ48_5161 PF08032 RNA 2'-O ribose methyltransferase substrate binding DJ48_5162 PF01409 tRNA synthetases class II core domain (F) DJ48_5162 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DJ48_5163 PF03483 B3/4 domain DJ48_5163 PF03147 Ferredoxin-fold anticodon binding domain DJ48_5163 PF01588 Putative tRNA binding domain DJ48_5163 PF03484 tRNA synthetase B5 domain DJ48_5163 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DJ48_5164 PF00152 tRNA synthetases class II (D, K and N) DJ48_5164 PF01336 OB-fold nucleic acid binding domain DJ48_5168 PF01351 Ribonuclease HII DJ48_5168 PF11858 Domain of unknown function (DUF3378) DJ48_5169 PF05164 Cell division protein ZapA DJ48_517 PF00403 Heavy-metal-associated domain DJ48_5170 PF02674 Colicin V production protein DJ48_5171 PF14791 DNA polymerase beta thumb DJ48_5171 PF14716 Helix-hairpin-helix domain DJ48_5171 PF02811 PHP domain DJ48_5172 PF00488 MutS domain V DJ48_5172 PF01713 Smr domain DJ48_5174 PF01479 S4 domain DJ48_5174 PF00849 RNA pseudouridylate synthase DJ48_5175 PF05525 Branched-chain amino acid transport protein DJ48_5176 PF05031 Iron Transport-associated domain DJ48_5178 PF05031 Iron Transport-associated domain DJ48_518 PF00216 Bacterial DNA-binding protein DJ48_5180 PF01497 Periplasmic binding protein DJ48_5181 PF01032 FecCD transport family DJ48_5182 PF00005 ABC transporter DJ48_5183 PF04203 Sortase domain DJ48_5184 PF03992 Antibiotic biosynthesis monooxygenase DJ48_5186 PF17785 PUA-like domain DJ48_5186 PF10672 S-adenosylmethionine-dependent methyltransferase DJ48_5187 PF09962 Uncharacterized conserved protein (DUF2196) DJ48_5189 PF00486 Transcriptional regulatory protein, C terminal DJ48_5189 PF00072 Response regulator receiver domain DJ48_519 PF01226 Formate/nitrite transporter DJ48_5190 PF00512 His Kinase A (phospho-acceptor) domain DJ48_5190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_5191 PF00005 ABC transporter DJ48_5197 PF05163 DinB family DJ48_5198 PF01032 FecCD transport family DJ48_5199 PF01497 Periplasmic binding protein DJ48_520 PF10518 TAT (twin-arginine translocation) pathway signal sequence DJ48_520 PF00149 Calcineurin-like phosphoesterase DJ48_5201 PF00501 AMP-binding enzyme DJ48_5201 PF13193 AMP-binding enzyme C-terminal domain DJ48_5202 PF00440 Bacterial regulatory proteins, tetR family DJ48_5202 PF08359 YsiA-like protein, C-terminal region DJ48_5203 PF00378 Enoyl-CoA hydratase/isomerase DJ48_5204 PF01012 Electron transfer flavoprotein domain DJ48_5205 PF00766 Electron transfer flavoprotein FAD-binding domain DJ48_5205 PF01012 Electron transfer flavoprotein domain DJ48_5206 PF00085 Thioredoxin DJ48_5207 PF01541 GIY-YIG catalytic domain DJ48_5207 PF08459 UvrC Helix-hairpin-helix N-terminal DJ48_5207 PF02151 UvrB/uvrC motif DJ48_5208 PF10702 Protein of unknown function (DUF2507) DJ48_5209 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DJ48_5210 PF02910 Fumarate reductase flavoprotein C-term DJ48_5210 PF00890 FAD binding domain DJ48_5211 PF13085 2Fe-2S iron-sulfur cluster binding domain DJ48_5211 PF13183 4Fe-4S dicluster domain DJ48_5212 PF03061 Thioesterase superfamily DJ48_5213 PF02557 D-alanyl-D-alanine carboxypeptidase DJ48_5214 PF01618 MotA/TolQ/ExbB proton channel family DJ48_5215 PF13677 Membrane MotB of proton-channel complex MotA/MotB DJ48_5215 PF00691 OmpA family DJ48_5216 PF13677 Membrane MotB of proton-channel complex MotA/MotB DJ48_5216 PF00691 OmpA family DJ48_5217 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DJ48_5218 PF13732 Domain of unknown function (DUF4162) DJ48_5218 PF00005 ABC transporter DJ48_522 PF00704 Glycosyl hydrolases family 18 DJ48_522 PF00041 Fibronectin type III domain DJ48_5220 PF02082 Transcriptional regulator DJ48_5221 PF00230 Major intrinsic protein DJ48_5222 PF13536 Putative multidrug resistance efflux transporter DJ48_5223 PF07883 Cupin domain DJ48_5223 PF01381 Helix-turn-helix DJ48_5224 PF04024 PspC domain DJ48_5226 PF00072 Response regulator receiver domain DJ48_5226 PF04397 LytTr DNA-binding domain DJ48_5227 PF07694 5TMR of 5TMR-LYT DJ48_5227 PF06580 Histidine kinase DJ48_5227 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_5228 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ48_5228 PF00005 ABC transporter DJ48_5229 PF00005 ABC transporter DJ48_5229 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ48_523 PF00324 Amino acid permease DJ48_5230 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_5232 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_5233 PF07969 Amidohydrolase family DJ48_5234 PF07969 Amidohydrolase family DJ48_5236 PF00860 Permease family DJ48_5237 PF00196 Bacterial regulatory proteins, luxR family DJ48_5240 PF00440 Bacterial regulatory proteins, tetR family DJ48_5242 PF07690 Major Facilitator Superfamily DJ48_5243 PF01177 Asp/Glu/Hydantoin racemase DJ48_5244 PF10646 Sporulation and spore germination DJ48_5245 PF01138 3' exoribonuclease family, domain 1 DJ48_5245 PF03725 3' exoribonuclease family, domain 2 DJ48_5246 PF01725 Ham1 family DJ48_5247 PF12850 Calcineurin-like phosphoesterase superfamily domain DJ48_5251 PF08000 Bacterial PH domain DJ48_5251 PF11724 YvbH-like oligomerisation region DJ48_5255 PF05698 Bacterial trigger factor protein (TF) C-terminus DJ48_5255 PF05697 Bacterial trigger factor protein (TF) DJ48_5255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DJ48_5256 PF07724 AAA domain (Cdc48 subfamily) DJ48_5256 PF06689 ClpX C4-type zinc finger DJ48_5256 PF10431 C-terminal, D2-small domain, of ClpB protein DJ48_5257 PF00004 ATPase family associated with various cellular activities (AAA) DJ48_5257 PF05362 Lon protease (S16) C-terminal proteolytic domain DJ48_5258 PF05362 Lon protease (S16) C-terminal proteolytic domain DJ48_5258 PF02190 ATP-dependent protease La (LON) substrate-binding domain DJ48_5258 PF00004 ATPase family associated with various cellular activities (AAA) DJ48_5259 PF01926 50S ribosome-binding GTPase DJ48_526 PF04238 Protein of unknown function (DUF420) DJ48_5260 PF02566 OsmC-like protein DJ48_5261 PF01047 MarR family DJ48_5262 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DJ48_5262 PF01488 Shikimate / quinate 5-dehydrogenase DJ48_5262 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DJ48_5263 PF01578 Cytochrome C assembly protein DJ48_5264 PF03900 Porphobilinogen deaminase, C-terminal domain DJ48_5264 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DJ48_5265 PF02602 Uroporphyrinogen-III synthase HemD DJ48_5266 PF00490 Delta-aminolevulinic acid dehydratase DJ48_5267 PF00202 Aminotransferase class-III DJ48_5268 PF01476 LysM domain DJ48_527 PF00465 Iron-containing alcohol dehydrogenase DJ48_5270 PF08264 Anticodon-binding domain of tRNA DJ48_5270 PF10458 Valyl tRNA synthetase tRNA binding arm DJ48_5270 PF00133 tRNA synthetases class I (I, L, M and V) DJ48_5271 PF02875 Mur ligase family, glutamate ligase domain DJ48_5271 PF08245 Mur ligase middle domain DJ48_5273 PF02545 Maf-like protein DJ48_5274 PF04002 RadC-like JAB domain DJ48_5276 PF04085 rod shape-determining protein MreC DJ48_5278 PF03775 Septum formation inhibitor MinC, C-terminal domain DJ48_5279 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DJ48_528 PF00465 Iron-containing alcohol dehydrogenase DJ48_5280 PF01551 Peptidase family M23 DJ48_5281 PF02163 Peptidase family M50 DJ48_5282 PF10150 Ribonuclease E/G family DJ48_5282 PF00575 S1 RNA binding domain DJ48_5283 PF00829 Ribosomal prokaryotic L21 protein DJ48_5284 PF04327 Cysteine protease Prp DJ48_5285 PF01016 Ribosomal L27 protein DJ48_5286 PF14682 Sporulation initiation phospho-transferase B, C-terminal DJ48_5286 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DJ48_5287 PF01018 GTP1/OBG DJ48_5287 PF01926 50S ribosome-binding GTPase DJ48_5287 PF09269 Domain of unknown function (DUF1967) DJ48_5288 PF00072 Response regulator receiver domain DJ48_5288 PF00486 Transcriptional regulatory protein, C terminal DJ48_529 PF08220 DeoR-like helix-turn-helix domain DJ48_529 PF00455 DeoR C terminal sensor domain DJ48_5290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_5291 PF00005 ABC transporter DJ48_5292 PF02687 FtsX-like permease family DJ48_5293 PF02687 FtsX-like permease family DJ48_5294 PF01842 ACT domain DJ48_5294 PF00800 Prephenate dehydratase DJ48_5295 PF03475 3-alpha domain DJ48_5295 PF03473 MOSC domain DJ48_5296 PF08279 HTH domain DJ48_5296 PF02829 3H domain DJ48_5297 PF00266 Aminotransferase class-V DJ48_5298 PF00890 FAD binding domain DJ48_5298 PF02910 Fumarate reductase flavoprotein C-term DJ48_5299 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DJ48_5299 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DJ48_53 PF00202 Aminotransferase class-III DJ48_530 PF00294 pfkB family carbohydrate kinase DJ48_5300 PF02445 Quinolinate synthetase A protein DJ48_5301 PF01476 LysM domain DJ48_5304 PF01022 Bacterial regulatory protein, arsR family DJ48_5305 PF00892 EamA-like transporter family DJ48_5306 PF00892 EamA-like transporter family DJ48_5308 PF01497 Periplasmic binding protein DJ48_5309 PF01330 RuvA N terminal domain DJ48_5309 PF07499 RuvA, C-terminal domain DJ48_531 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJ48_531 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DJ48_5310 PF05496 Holliday junction DNA helicase RuvB P-loop domain DJ48_5310 PF17864 RuvB AAA lid domain DJ48_5310 PF05491 RuvB C-terminal winged helix domain DJ48_5311 PF11146 Protein of unknown function (DUF2905) DJ48_5312 PF02547 Queuosine biosynthesis protein DJ48_5313 PF01702 Queuine tRNA-ribosyltransferase DJ48_5314 PF02699 Preprotein translocase subunit DJ48_5316 PF04239 Protein of unknown function (DUF421) DJ48_5317 PF01943 Polysaccharide biosynthesis protein DJ48_5317 PF14667 Polysaccharide biosynthesis C-terminal domain DJ48_5318 PF13797 Post-transcriptional regulator DJ48_5319 PF02355 Protein export membrane protein DJ48_5319 PF07549 SecD/SecF GG Motif DJ48_532 PF01476 LysM domain DJ48_532 PF06725 3D domain DJ48_5320 PF01545 Cation efflux family DJ48_5320 PF16916 Dimerisation domain of Zinc Transporter DJ48_5321 PF17768 RecJ OB domain DJ48_5321 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DJ48_5321 PF02272 DHHA1 domain DJ48_5321 PF01368 DHH family DJ48_5322 PF00156 Phosphoribosyl transferase domain DJ48_5323 PF02824 TGS domain DJ48_5323 PF04607 Region found in RelA / SpoT proteins DJ48_5323 PF13291 ACT domain DJ48_5324 PF02580 D-Tyr-tRNA(Tyr) deacylase DJ48_5326 PF13393 Histidyl-tRNA synthetase DJ48_5326 PF03129 Anticodon binding domain DJ48_5327 PF01336 OB-fold nucleic acid binding domain DJ48_5327 PF02938 GAD domain DJ48_5327 PF00152 tRNA synthetases class II (D, K and N) DJ48_5328 PF00899 ThiF family DJ48_5330 PF12002 MgsA AAA+ ATPase C terminal DJ48_5330 PF05496 Holliday junction DNA helicase RuvB P-loop domain DJ48_5330 PF16193 AAA C-terminal domain DJ48_5331 PF02082 Transcriptional regulator DJ48_5332 PF00266 Aminotransferase class-V DJ48_5335 PF13538 UvrD-like helicase C-terminal domain DJ48_5335 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DJ48_5335 PF14490 Helix-hairpin-helix containing domain DJ48_5339 PF01594 AI-2E family transporter DJ48_5341 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ48_5341 PF02272 DHHA1 domain DJ48_5341 PF01411 tRNA synthetases class II (A) DJ48_5342 PF06135 IreB regulatory phosphoprotein DJ48_5343 PF03652 Holliday junction resolvase DJ48_5344 PF06949 Protein of unknown function (DUF1292) DJ48_5345 PF02618 YceG-like family DJ48_5349 PF00485 Phosphoribulokinase / Uridine kinase family DJ48_535 PF17209 Hfq protein DJ48_5350 PF03449 Transcription elongation factor, N-terminal DJ48_5350 PF01272 Transcription elongation factor, GreA/GreB, C-term DJ48_5351 PF03717 Penicillin-binding Protein dimerisation domain DJ48_5351 PF00905 Penicillin binding protein transpeptidase domain DJ48_5354 PF08241 Methyltransferase domain DJ48_5355 PF01048 Phosphorylase superfamily DJ48_5356 PF00291 Pyridoxal-phosphate dependent enzyme DJ48_5357 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ48_5358 PF00465 Iron-containing alcohol dehydrogenase DJ48_5358 PF00171 Aldehyde dehydrogenase family DJ48_5359 PF14143 YrhC-like protein DJ48_5360 PF01497 Periplasmic binding protein DJ48_5361 PF01032 FecCD transport family DJ48_5362 PF00005 ABC transporter DJ48_5368 PF07681 DoxX DJ48_5369 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_5371 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DJ48_5372 PF05922 Peptidase inhibitor I9 DJ48_5372 PF00082 Subtilase family DJ48_5372 PF02225 PA domain DJ48_5372 PF13860 FlgD Ig-like domain DJ48_538 PF00004 ATPase family associated with various cellular activities (AAA) DJ48_538 PF17866 AAA lid domain DJ48_5380 PF08386 TAP-like protein DJ48_5380 PF00561 alpha/beta hydrolase fold DJ48_5382 PF00245 Alkaline phosphatase DJ48_5385 PF04607 Region found in RelA / SpoT proteins DJ48_5386 PF00881 Nitroreductase family DJ48_5387 PF00471 Ribosomal protein L33 DJ48_5388 PF16244 Domain of unknown function (DUF4901) DJ48_5390 PF04542 Sigma-70 region 2 DJ48_5390 PF04545 Sigma-70, region 4 DJ48_5391 PF02666 Phosphatidylserine decarboxylase DJ48_5393 PF01926 50S ribosome-binding GTPase DJ48_5394 PF08501 Shikimate dehydrogenase substrate binding domain DJ48_5394 PF01488 Shikimate / quinate 5-dehydrogenase DJ48_5394 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DJ48_5395 PF01985 CRS1 / YhbY (CRM) domain DJ48_5396 PF01467 Cytidylyltransferase-like DJ48_5397 PF01966 HD domain DJ48_5399 PF13649 Methyltransferase domain DJ48_540 PF03458 UPF0126 domain DJ48_5400 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJ48_5400 PF03807 NADP oxidoreductase coenzyme F420-dependent DJ48_5401 PF10531 SLBB domain DJ48_5402 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ48_5403 PF03772 Competence protein DJ48_5403 PF13567 Domain of unknown function (DUF4131) DJ48_5403 PF00753 Metallo-beta-lactamase superfamily DJ48_5404 PF14141 YqzM-like protein DJ48_5405 PF06144 DNA polymerase III, delta subunit DJ48_5406 PF01649 Ribosomal protein S20 DJ48_5407 PF03418 Germination protease DJ48_5409 PF06421 GTP-binding protein LepA C-terminus DJ48_5409 PF00679 Elongation factor G C-terminus DJ48_5409 PF00009 Elongation factor Tu GTP binding domain DJ48_5409 PF03144 Elongation factor Tu domain 2 DJ48_541 PF16360 GTP-binding GTPase Middle Region DJ48_541 PF13167 GTP-binding GTPase N-terminal DJ48_541 PF01926 50S ribosome-binding GTPase DJ48_5410 PF01638 HxlR-like helix-turn-helix DJ48_5411 PF04055 Radical SAM superfamily DJ48_5411 PF06969 HemN C-terminal domain DJ48_5412 PF01628 HrcA protein C terminal domain DJ48_5413 PF01025 GrpE DJ48_5414 PF00012 Hsp70 protein DJ48_5415 PF00226 DnaJ domain DJ48_5415 PF01556 DnaJ C terminal domain DJ48_5415 PF00684 DnaJ central domain DJ48_5417 PF04452 RNA methyltransferase DJ48_5418 PF01938 TRAM domain DJ48_5418 PF04055 Radical SAM superfamily DJ48_5418 PF00919 Uncharacterized protein family UPF0004 DJ48_5419 PF01165 Ribosomal protein S21 DJ48_542 PF06838 Methionine gamma-lyase DJ48_5420 PF09424 Yqey-like protein DJ48_5421 PF07873 YabP family DJ48_5422 PF06898 Putative stage IV sporulation protein YqfD DJ48_5423 PF02562 PhoH-like protein DJ48_5424 PF01966 HD domain DJ48_5424 PF07698 7TM receptor with intracellular HD hydrolase DJ48_5424 PF07697 7TM-HD extracellular DJ48_5425 PF02130 Uncharacterized protein family UPF0054 DJ48_5426 PF01219 Prokaryotic diacylglycerol kinase DJ48_5427 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ48_5428 PF07650 KH domain DJ48_5428 PF01926 50S ribosome-binding GTPase DJ48_543 PF13411 MerR HTH family regulatory protein DJ48_5430 PF11967 Recombination protein O N terminal DJ48_5430 PF02565 Recombination protein O C terminal DJ48_5431 PF08279 HTH domain DJ48_5431 PF00571 CBS domain DJ48_5432 PF03618 Kinase/pyrophosphorylase DJ48_5433 PF10410 DnaB-helicase binding domain of primase DJ48_5433 PF01807 CHC2 zinc finger DJ48_5433 PF08275 DNA primase catalytic core, N-terminal domain DJ48_5434 PF03979 Sigma-70 factor, region 1.1 DJ48_5434 PF00140 Sigma-70 factor, region 1.2 DJ48_5434 PF04542 Sigma-70 region 2 DJ48_5434 PF04545 Sigma-70, region 4 DJ48_5434 PF04539 Sigma-70 region 3 DJ48_5435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DJ48_5436 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DJ48_5437 PF01784 NIF3 (NGG1p interacting factor 3) DJ48_5438 PF02401 LytB protein DJ48_544 PF03951 Glutamine synthetase, beta-Grasp domain DJ48_544 PF00120 Glutamine synthetase, catalytic domain DJ48_5440 PF00270 DEAD/DEAH box helicase DJ48_5440 PF00271 Helicase conserved C-terminal domain DJ48_5441 PF01261 Xylose isomerase-like TIM barrel DJ48_5442 PF11116 Protein of unknown function (DUF2624) DJ48_5443 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ48_5443 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ48_5444 PF00005 ABC transporter DJ48_5445 PF00950 ABC 3 transport family DJ48_5446 PF01475 Ferric uptake regulator family DJ48_5447 PF04551 GcpE protein DJ48_545 PF02899 Phage integrase, N-terminal SAM-like domain DJ48_545 PF00589 Phage integrase family DJ48_5451 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DJ48_5451 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DJ48_5452 PF07690 Major Facilitator Superfamily DJ48_5454 PF12849 PBP superfamily domain DJ48_5455 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_5456 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_5457 PF00005 ABC transporter DJ48_5458 PF01895 PhoU domain DJ48_5459 PF00483 Nucleotidyl transferase DJ48_5460 PF00471 Ribosomal protein L33 DJ48_5461 PF01812 5-formyltetrahydrofolate cyclo-ligase family DJ48_5462 PF06014 Bacterial protein of unknown function (DUF910) DJ48_5463 PF00480 ROK family DJ48_5464 PF00480 ROK family DJ48_5465 PF10958 Protein of unknown function (DUF2759) DJ48_5466 PF00753 Metallo-beta-lactamase superfamily DJ48_5468 PF01022 Bacterial regulatory protein, arsR family DJ48_5470 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ48_5471 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ48_5472 PF02574 Homocysteine S-methyltransferase DJ48_5472 PF02219 Methylenetetrahydrofolate reductase DJ48_5473 PF02310 B12 binding domain DJ48_5473 PF02607 B12 binding domain DJ48_5473 PF02965 Vitamin B12 dependent methionine synthase, activation domain DJ48_5473 PF02574 Homocysteine S-methyltransferase DJ48_5473 PF00809 Pterin binding enzyme DJ48_5474 PF04101 Glycosyltransferase family 28 C-terminal domain DJ48_5474 PF03033 Glycosyltransferase family 28 N-terminal domain DJ48_548 PF01381 Helix-turn-helix DJ48_5481 PF00375 Sodium:dicarboxylate symporter family DJ48_5482 PF11117 Protein of unknown function (DUF2626) DJ48_5484 PF00437 Type II/IV secretion system protein DJ48_5485 PF00482 Type II secretion system (T2SS), protein F DJ48_5487 PF07963 Prokaryotic N-terminal methylation motif DJ48_5492 PF01202 Shikimate kinase DJ48_5493 PF14038 YqzE-like protein DJ48_5497 PF11079 Bacterial protein YqhG of unknown function DJ48_5498 PF00176 SNF2 family N-terminal domain DJ48_5498 PF00271 Helicase conserved C-terminal domain DJ48_5499 PF08669 Glycine cleavage T-protein C-terminal barrel domain DJ48_5499 PF01571 Aminomethyltransferase folate-binding domain DJ48_55 PF00155 Aminotransferase class I and II DJ48_5500 PF02347 Glycine cleavage system P-protein DJ48_5501 PF02347 Glycine cleavage system P-protein DJ48_5504 PF00392 Bacterial regulatory proteins, gntR family DJ48_5505 PF00005 ABC transporter DJ48_5512 PF00893 Small Multidrug Resistance protein DJ48_5513 PF00893 Small Multidrug Resistance protein DJ48_5515 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJ48_5515 PF00356 Bacterial regulatory proteins, lacI family DJ48_5516 PF00581 Rhodanese-like domain DJ48_5517 PF03099 Biotin/lipoate A/B protein ligase family DJ48_5520 PF01325 Iron dependent repressor, N-terminal DNA binding domain DJ48_5520 PF02742 Iron dependent repressor, metal binding and dimerisation domain DJ48_5522 PF13419 Haloacid dehalogenase-like hydrolase DJ48_5523 PF07136 Protein of unknown function (DUF1385) DJ48_5524 PF11085 Conserved membrane protein YqhR DJ48_5525 PF01220 Dehydroquinase class II DJ48_5526 PF00557 Metallopeptidase family M24 DJ48_5526 PF01321 Creatinase/Prolidase N-terminal domain DJ48_5527 PF09285 Elongation factor P, C-terminal DJ48_5527 PF01132 Elongation factor P (EF-P) OB domain DJ48_5527 PF08207 Elongation factor P (EF-P) KOW-like domain DJ48_5532 PF09548 Stage III sporulation protein AB (spore_III_AB) DJ48_5533 PF06686 Stage III sporulation protein AC/AD protein family DJ48_5534 PF06686 Stage III sporulation protein AC/AD protein family DJ48_5535 PF09546 Stage III sporulation protein AE (spore_III_AE) DJ48_5536 PF09581 Stage III sporulation protein AF (Spore_III_AF) DJ48_5538 PF12685 SpoIIIAH-like protein DJ48_5540 PF00364 Biotin-requiring enzyme DJ48_5541 PF00289 Biotin carboxylase, N-terminal domain DJ48_5541 PF02785 Biotin carboxylase C-terminal domain DJ48_5541 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ48_5542 PF03780 Asp23 family, cell envelope-related function DJ48_5543 PF01029 NusB family DJ48_5544 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DJ48_5544 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DJ48_5545 PF02601 Exonuclease VII, large subunit DJ48_5545 PF13742 OB-fold nucleic acid binding domain DJ48_5546 PF02609 Exonuclease VII small subunit DJ48_5547 PF00348 Polyprenyl synthetase DJ48_5551 PF17631 Family of unknown function (DUF5512) DJ48_5554 PF17362 Family of unknown function DJ48_5559 PF08708 Primase C terminal 1 (PriCT-1) DJ48_5560 PF13614 AAA domain DJ48_5563 PF00395 S-layer homology domain DJ48_5563 PF01520 N-acetylmuramoyl-L-alanine amidase DJ48_5564 PF00395 S-layer homology domain DJ48_5564 PF01520 N-acetylmuramoyl-L-alanine amidase DJ48_5565 PF13276 HTH-like domain DJ48_5565 PF00665 Integrase core domain DJ48_5565 PF13333 Integrase core domain DJ48_5569 PF01906 Putative heavy-metal-binding DJ48_5570 PF02517 CPBP intramembrane metalloprotease DJ48_5571 PF04463 Protein of unknown function (DUF523) DJ48_5572 PF00440 Bacterial regulatory proteins, tetR family DJ48_5573 PF01609 Transposase DDE domain DJ48_5574 PF01609 Transposase DDE domain DJ48_5575 PF01569 PAP2 superfamily DJ48_5576 PF01569 PAP2 superfamily DJ48_5578 PF08280 M protein trans-acting positive regulator (MGA) HTH domain DJ48_5578 PF05043 Mga helix-turn-helix domain DJ48_5582 PF09587 Bacterial capsule synthesis protein PGA_cap DJ48_5583 PF14102 Capsule biosynthesis CapC DJ48_5584 PF08245 Mur ligase middle domain DJ48_5586 PF01022 Bacterial regulatory protein, arsR family DJ48_5587 PF01609 Transposase DDE domain DJ48_5589 PF10502 Signal peptidase, peptidase S26 DJ48_5591 PF09385 Histidine kinase N terminal DJ48_5592 PF00874 PRD domain DJ48_5592 PF05043 Mga helix-turn-helix domain DJ48_5592 PF08279 HTH domain DJ48_5593 PF05043 Mga helix-turn-helix domain DJ48_5593 PF08279 HTH domain DJ48_5593 PF00874 PRD domain DJ48_5595 PF01810 LysE type translocator DJ48_5597 PF00874 PRD domain DJ48_5597 PF05043 Mga helix-turn-helix domain DJ48_5597 PF08280 M protein trans-acting positive regulator (MGA) HTH domain DJ48_56 PF08241 Methyltransferase domain DJ48_56 PF12697 Alpha/beta hydrolase family DJ48_5601 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_5603 PF13152 Protein of unknown function (DUF3967) DJ48_5603 PF13411 MerR HTH family regulatory protein DJ48_5604 PF00817 impB/mucB/samB family DJ48_5604 PF11799 impB/mucB/samB family C-terminal domain DJ48_5604 PF11798 IMS family HHH motif DJ48_5608 PF17443 Uncharacterized protein pXO2-72 DJ48_5614 PF01751 Toprim domain DJ48_5614 PF01131 DNA topoisomerase DJ48_5615 PF01751 Toprim domain DJ48_5615 PF01131 DNA topoisomerase DJ48_5616 PF13154 Protein of unknown function (DUF3991) DJ48_5619 PF18840 Large polyvalent protein associated domain 25 DJ48_5620 PF17630 Family of unknown function (DUF5511) DJ48_5621 PF17633 Family of unknown function (DUF5514) DJ48_5627 PF17632 Family of unknown function (DUF5513) DJ48_5629 PF00877 NlpC/P60 family DJ48_563 PF00145 C-5 cytosine-specific DNA methylase DJ48_5636 PF12696 TraM recognition site of TraD and TraG DJ48_5639 PF04956 TrbC/VIRB2 family DJ48_564 PF02511 Thymidylate synthase complementing protein DJ48_5645 PF00437 Type II/IV secretion system protein DJ48_57 PF13847 Methyltransferase domain DJ48_572 PF08281 Sigma-70, region 4 DJ48_58 PF06968 Biotin and Thiamin Synthesis associated domain DJ48_58 PF04055 Radical SAM superfamily DJ48_59 PF00885 6,7-dimethyl-8-ribityllumazine synthase DJ48_6 PF00072 Response regulator receiver domain DJ48_6 PF08769 Sporulation initiation factor Spo0A C terminal DJ48_602 PF05105 Bacteriophage holin family DJ48_603 PF01476 LysM domain DJ48_603 PF01510 N-acetylmuramoyl-L-alanine amidase DJ48_603 PF01471 Putative peptidoglycan binding domain DJ48_61 PF00925 GTP cyclohydrolase II DJ48_61 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DJ48_611 PF03551 Transcriptional regulator PadR-like family DJ48_614 PF00717 Peptidase S24-like DJ48_614 PF01726 LexA DNA binding domain DJ48_615 PF00239 Resolvase, N terminal domain DJ48_616 PF05979 Bacterial protein of unknown function (DUF896) DJ48_617 PF02872 5'-nucleotidase, C-terminal domain DJ48_617 PF00149 Calcineurin-like phosphoesterase DJ48_62 PF00677 Lumazine binding domain DJ48_620 PF00005 ABC transporter DJ48_621 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_622 PF00528 Binding-protein-dependent transport system inner membrane component DJ48_623 PF12323 Helix-turn-helix domain DJ48_623 PF01385 Probable transposase DJ48_623 PF07282 Putative transposase DNA-binding domain DJ48_624 PF00456 Transketolase, thiamine diphosphate binding domain DJ48_624 PF02779 Transketolase, pyrimidine binding domain DJ48_624 PF02780 Transketolase, C-terminal domain DJ48_625 PF10747 Sporulation inhibitor of replication protein SirA DJ48_626 PF03672 Uncharacterised protein family (UPF0154) DJ48_627 PF00664 ABC transporter transmembrane region DJ48_627 PF00005 ABC transporter DJ48_628 PF00664 ABC transporter transmembrane region DJ48_628 PF00005 ABC transporter DJ48_63 PF01872 RibD C-terminal domain DJ48_63 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ48_631 PF01471 Putative peptidoglycan binding domain DJ48_631 PF01510 N-acetylmuramoyl-L-alanine amidase DJ48_633 PF01925 Sulfite exporter TauE/SafE DJ48_635 PF13344 Haloacid dehalogenase-like hydrolase DJ48_635 PF00293 NUDIX domain DJ48_636 PF04172 LrgB-like family DJ48_637 PF03788 LrgA family DJ48_638 PF03466 LysR substrate binding domain DJ48_638 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ48_640 PF00005 ABC transporter DJ48_644 PF02683 Cytochrome C biogenesis protein transmembrane region DJ48_645 PF07301 Protein of unknown function (DUF1453) DJ48_648 PF11084 Protein of unknown function (DUF2621) DJ48_65 PF10827 Protein of unknown function (DUF2552) DJ48_652 PF01209 ubiE/COQ5 methyltransferase family DJ48_653 PF09021 HutP DJ48_654 PF00221 Aromatic amino acid lyase DJ48_655 PF17391 Urocanase N-terminal domain DJ48_655 PF17392 Urocanase C-terminal domain DJ48_655 PF01175 Urocanase Rossmann-like domain DJ48_656 PF01979 Amidohydrolase family DJ48_657 PF00491 Arginase family DJ48_658 PF02559 CarD-like/TRCF domain DJ48_659 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ48_66 PF12146 Serine aminopeptidase, S33 DJ48_660 PF01645 Conserved region in glutamate synthase DJ48_661 PF00474 Sodium:solute symporter family DJ48_662 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_663 PF01738 Dienelactone hydrolase family DJ48_664 PF00512 His Kinase A (phospho-acceptor) domain DJ48_664 PF00989 PAS fold DJ48_664 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_664 PF13188 PAS domain DJ48_664 PF13426 PAS domain DJ48_666 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ48_666 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ48_67 PF00583 Acetyltransferase (GNAT) family DJ48_672 PF05532 CsbD-like DJ48_675 PF13193 AMP-binding enzyme C-terminal domain DJ48_675 PF00501 AMP-binding enzyme DJ48_676 PF02632 BioY family DJ48_677 PF13193 AMP-binding enzyme C-terminal domain DJ48_677 PF00501 AMP-binding enzyme DJ48_678 PF00108 Thiolase, N-terminal domain DJ48_678 PF02803 Thiolase, C-terminal domain DJ48_68 PF00356 Bacterial regulatory proteins, lacI family DJ48_680 PF13344 Haloacid dehalogenase-like hydrolase DJ48_680 PF00293 NUDIX domain DJ48_681 PF01411 tRNA synthetases class II (A) DJ48_681 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ48_681 PF02272 DHHA1 domain DJ48_683 PF07690 Major Facilitator Superfamily DJ48_685 PF08179 Small acid-soluble spore protein P family DJ48_687 PF01522 Polysaccharide deacetylase DJ48_689 PF00694 Aconitase C-terminal domain DJ48_689 PF00330 Aconitase family (aconitate hydratase) DJ48_69 PF03553 Na+/H+ antiporter family DJ48_69 PF13726 Na+-H+ antiporter family DJ48_690 PF03412 Peptidase C39 family DJ48_690 PF00664 ABC transporter transmembrane region DJ48_690 PF00005 ABC transporter DJ48_692 PF00578 AhpC/TSA family DJ48_693 PF01336 OB-fold nucleic acid binding domain DJ48_693 PF00929 Exonuclease DJ48_693 PF07733 Bacterial DNA polymerase III alpha NTPase domain DJ48_693 PF02811 PHP domain DJ48_693 PF14579 Helix-hairpin-helix motif DJ48_693 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DJ48_693 PF11490 DNA polymerase III polC-type N-terminus II DJ48_694 PF13040 Fur-regulated basic protein B DJ48_695 PF08177 Small acid-soluble spore protein N family DJ48_697 PF00704 Glycosyl hydrolases family 18 DJ48_697 PF01476 LysM domain DJ48_698 PF03061 Thioesterase superfamily DJ48_699 PF01521 Iron-sulphur cluster biosynthesis DJ48_70 PF12146 Serine aminopeptidase, S33 DJ48_700 PF02660 Glycerol-3-phosphate acyltransferase DJ48_701 PF13597 Anaerobic ribonucleoside-triphosphate reductase DJ48_701 PF03477 ATP cone domain DJ48_702 PF04055 Radical SAM superfamily DJ48_703 PF00072 Response regulator receiver domain DJ48_703 PF00486 Transcriptional regulatory protein, C terminal DJ48_704 PF13180 PDZ domain DJ48_705 PF13380 CoA binding domain DJ48_706 PF01751 Toprim domain DJ48_706 PF00204 DNA gyrase B DJ48_706 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ48_706 PF00986 DNA gyrase B subunit, carboxyl terminus DJ48_707 PF00521 DNA gyrase/topoisomerase IV, subunit A DJ48_707 PF03989 DNA gyrase C-terminal domain, beta-propeller DJ48_708 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJ48_708 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ48_710 PF13732 Domain of unknown function (DUF4162) DJ48_710 PF00005 ABC transporter DJ48_713 PF08281 Sigma-70, region 4 DJ48_713 PF04542 Sigma-70 region 2 DJ48_715 PF03816 Cell envelope-related transcriptional attenuator domain DJ48_716 PF03816 Cell envelope-related transcriptional attenuator domain DJ48_717 PF00375 Sodium:dicarboxylate symporter family DJ48_718 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_719 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_72 PF00565 Staphylococcal nuclease homologue DJ48_72 PF00149 Calcineurin-like phosphoesterase DJ48_72 PF00746 LPXTG cell wall anchor motif DJ48_72 PF02872 5'-nucleotidase, C-terminal domain DJ48_720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ48_721 PF08241 Methyltransferase domain DJ48_729 PF03323 Bacillus/Clostridium GerA spore germination protein DJ48_731 PF00037 4Fe-4S binding domain DJ48_731 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJ48_731 PF01568 Molydopterin dinucleotide binding domain DJ48_731 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJ48_731 PF00384 Molybdopterin oxidoreductase DJ48_732 PF07849 Protein of unknown function (DUF1641) DJ48_733 PF10057 Uncharacterized conserved protein (DUF2294) DJ48_734 PF02634 FdhD/NarQ family DJ48_735 PF04055 Radical SAM superfamily DJ48_735 PF06463 Molybdenum Cofactor Synthesis C DJ48_736 PF01226 Formate/nitrite transporter DJ48_737 PF00899 ThiF family DJ48_738 PF00899 ThiF family DJ48_739 PF03453 MoeA N-terminal region (domain I and II) DJ48_739 PF03454 MoeA C-terminal region (domain IV) DJ48_739 PF00994 Probable molybdopterin binding domain DJ48_74 PF13673 Acetyltransferase (GNAT) domain DJ48_74 PF04229 GrpB protein DJ48_740 PF02391 MoaE protein DJ48_742 PF10609 NUBPL iron-transfer P-loop NTPase DJ48_745 PF06961 Protein of unknown function (DUF1294) DJ48_746 PF00892 EamA-like transporter family DJ48_747 PF02681 Divergent PAP2 family DJ48_748 PF13249 Squalene-hopene cyclase N-terminal domain DJ48_748 PF13243 Squalene-hopene cyclase C-terminal domain DJ48_749 PF14151 YfhD-like protein DJ48_75 PF00248 Aldo/keto reductase family DJ48_751 PF00171 Aldehyde dehydrogenase family DJ48_753 PF00474 Sodium:solute symporter family DJ48_754 PF01156 Inosine-uridine preferring nucleoside hydrolase DJ48_756 PF00206 Lyase DJ48_756 PF14698 Argininosuccinate lyase C-terminal DJ48_758 PF00106 short chain dehydrogenase DJ48_76 PF00248 Aldo/keto reductase family DJ48_762 PF00132 Bacterial transferase hexapeptide (six repeats) DJ48_764 PF00293 NUDIX domain DJ48_766 PF00258 Flavodoxin DJ48_768 PF00313 'Cold-shock' DNA-binding domain DJ48_77 PF13072 Mother cell inhibitor of FtsZ DJ48_772 PF13037 Domain of unknown function (DUF3898) DJ48_772 PF13039 Protein of unknown function (DUF3900) DJ48_774 PF04294 VanW like protein DJ48_775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_777 PF02308 MgtC family DJ48_778 PF08453 Peptidase family M9 N-terminal DJ48_778 PF01752 Collagenase DJ48_778 PF18496 Collagenase G catalytic helper subdomain DJ48_779 PF00378 Enoyl-CoA hydratase/isomerase DJ48_78 PF00293 NUDIX domain DJ48_780 PF00535 Glycosyl transferase family 2 DJ48_781 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DJ48_782 PF00132 Bacterial transferase hexapeptide (six repeats) DJ48_786 PF02913 FAD linked oxidases, C-terminal domain DJ48_786 PF01565 FAD binding domain DJ48_787 PF01758 Sodium Bile acid symporter family DJ48_789 PF04229 GrpB protein DJ48_790 PF04299 Putative FMN-binding domain DJ48_792 PF18801 response regulator aspartate phosphatase H, N terminal DJ48_793 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DJ48_794 PF00107 Zinc-binding dehydrogenase DJ48_794 PF08240 Alcohol dehydrogenase GroES-like domain DJ48_795 PF01022 Bacterial regulatory protein, arsR family DJ48_796 PF01494 FAD binding domain DJ48_799 PF03009 Glycerophosphoryl diester phosphodiesterase family DJ48_8 PF14174 YycC-like protein DJ48_80 PF01944 Stage II sporulation protein M DJ48_802 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ48_802 PF03466 LysR substrate binding domain DJ48_803 PF07690 Major Facilitator Superfamily DJ48_805 PF00144 Beta-lactamase DJ48_806 PF08439 Oligopeptidase F DJ48_806 PF01432 Peptidase family M3 DJ48_807 PF00797 N-acetyltransferase DJ48_808 PF09154 Domain of unknown function (DUF1939) DJ48_808 PF00128 Alpha amylase, catalytic domain DJ48_81 PF01475 Ferric uptake regulator family DJ48_810 PF00488 MutS domain V DJ48_810 PF01713 Smr domain DJ48_813 PF00107 Zinc-binding dehydrogenase DJ48_813 PF08240 Alcohol dehydrogenase GroES-like domain DJ48_814 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ48_814 PF03466 LysR substrate binding domain DJ48_816 PF10901 Protein of unknown function (DUF2690) DJ48_819 PF13170 Protein of unknown function (DUF4003) DJ48_82 PF14004 Protein of unknown function (DUF4227) DJ48_820 PF02567 Phenazine biosynthesis-like protein DJ48_821 PF05675 Protein of unknown function (DUF817) DJ48_822 PF01032 FecCD transport family DJ48_823 PF01032 FecCD transport family DJ48_824 PF01497 Periplasmic binding protein DJ48_828 PF03600 Citrate transporter DJ48_829 PF08830 Protein of unknown function (DUF1806) DJ48_83 PF02899 Phage integrase, N-terminal SAM-like domain DJ48_83 PF00589 Phage integrase family DJ48_830 PF02585 GlcNAc-PI de-N-acetylase DJ48_835 PF07690 Major Facilitator Superfamily DJ48_836 PF00324 Amino acid permease DJ48_837 PF00107 Zinc-binding dehydrogenase DJ48_837 PF08240 Alcohol dehydrogenase GroES-like domain DJ48_838 PF00753 Metallo-beta-lactamase superfamily DJ48_846 PF00144 Beta-lactamase DJ48_85 PF01676 Metalloenzyme superfamily DJ48_851 PF01471 Putative peptidoglycan binding domain DJ48_851 PF01183 Glycosyl hydrolases family 25 DJ48_852 PF00753 Metallo-beta-lactamase superfamily DJ48_855 PF03063 Prismane/CO dehydrogenase family DJ48_858 PF13732 Domain of unknown function (DUF4162) DJ48_858 PF00005 ABC transporter DJ48_859 PF01061 ABC-2 type transporter DJ48_86 PF01048 Phosphorylase superfamily DJ48_860 PF05656 Protein of unknown function (DUF805) DJ48_864 PF00440 Bacterial regulatory proteins, tetR family DJ48_866 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DJ48_866 PF00535 Glycosyl transferase family 2 DJ48_867 PF04542 Sigma-70 region 2 DJ48_868 PF12791 Anti-sigma factor N-terminus DJ48_87 PF00591 Glycosyl transferase family, a/b domain DJ48_87 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DJ48_87 PF02885 Glycosyl transferase family, helical bundle domain DJ48_870 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DJ48_870 PF01522 Polysaccharide deacetylase DJ48_871 PF01022 Bacterial regulatory protein, arsR family DJ48_874 PF01638 HxlR-like helix-turn-helix DJ48_875 PF02525 Flavodoxin-like fold DJ48_877 PF13193 AMP-binding enzyme C-terminal domain DJ48_877 PF00501 AMP-binding enzyme DJ48_878 PF13193 AMP-binding enzyme C-terminal domain DJ48_878 PF00501 AMP-binding enzyme DJ48_88 PF01544 CorA-like Mg2+ transporter protein DJ48_882 PF02567 Phenazine biosynthesis-like protein DJ48_888 PF00248 Aldo/keto reductase family DJ48_889 PF01638 HxlR-like helix-turn-helix DJ48_89 PF00860 Permease family DJ48_890 PF01638 HxlR-like helix-turn-helix DJ48_892 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJ48_892 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ48_893 PF07702 UTRA domain DJ48_893 PF00392 Bacterial regulatory proteins, gntR family DJ48_894 PF01638 HxlR-like helix-turn-helix DJ48_895 PF03960 ArsC family DJ48_9 PF03009 Glycerophosphoryl diester phosphodiesterase family DJ48_901 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_902 PF03928 Haem-degrading DJ48_904 PF07690 Major Facilitator Superfamily DJ48_905 PF00248 Aldo/keto reductase family DJ48_909 PF03413 Peptidase propeptide and YPEB domain DJ48_909 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ48_909 PF01447 Thermolysin metallopeptidase, catalytic domain DJ48_909 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ48_91 PF01047 MarR family DJ48_910 PF00106 short chain dehydrogenase DJ48_911 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ48_911 PF08659 KR domain DJ48_911 PF00550 Phosphopantetheine attachment site DJ48_911 PF14765 Polyketide synthase dehydratase DJ48_911 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ48_911 PF16197 Ketoacyl-synthetase C-terminal extension DJ48_911 PF00107 Zinc-binding dehydrogenase DJ48_911 PF08240 Alcohol dehydrogenase GroES-like domain DJ48_911 PF00698 Acyl transferase domain DJ48_913 PF00296 Luciferase-like monooxygenase DJ48_914 PF08240 Alcohol dehydrogenase GroES-like domain DJ48_914 PF00107 Zinc-binding dehydrogenase DJ48_915 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DJ48_915 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DJ48_916 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DJ48_916 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DJ48_917 PF00456 Transketolase, thiamine diphosphate binding domain DJ48_917 PF02780 Transketolase, C-terminal domain DJ48_917 PF02779 Transketolase, pyrimidine binding domain DJ48_918 PF00456 Transketolase, thiamine diphosphate binding domain DJ48_918 PF02779 Transketolase, pyrimidine binding domain DJ48_918 PF02780 Transketolase, C-terminal domain DJ48_919 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ48_919 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DJ48_920 PF00923 Transaldolase/Fructose-6-phosphate aldolase DJ48_921 PF02447 GntP family permease DJ48_922 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ48_922 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ48_923 PF10282 Lactonase, 7-bladed beta-propeller DJ48_924 PF06906 Protein of unknown function (DUF1272) DJ48_925 PF00805 Pentapeptide repeats (8 copies) DJ48_926 PF00892 EamA-like transporter family DJ48_927 PF13411 MerR HTH family regulatory protein DJ48_928 PF01595 Cyclin M transmembrane N-terminal domain DJ48_928 PF03471 Transporter associated domain DJ48_928 PF00571 CBS domain DJ48_930 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ48_934 PF07690 Major Facilitator Superfamily DJ48_936 PF08241 Methyltransferase domain DJ48_94 PF00005 ABC transporter DJ48_940 PF01594 AI-2E family transporter DJ48_941 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DJ48_941 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DJ48_941 PF13288 DXP reductoisomerase C-terminal domain DJ48_942 PF00579 tRNA synthetases class I (W and Y) DJ48_944 PF00005 ABC transporter DJ48_946 PF12464 Maltose acetyltransferase DJ48_946 PF14602 Hexapeptide repeat of succinyl-transferase DJ48_947 PF07690 Major Facilitator Superfamily DJ48_948 PF00480 ROK family DJ48_949 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ48_95 PF00392 Bacterial regulatory proteins, gntR family DJ48_951 PF13344 Haloacid dehalogenase-like hydrolase DJ48_951 PF00293 NUDIX domain DJ48_956 PF13419 Haloacid dehalogenase-like hydrolase DJ48_96 PF07943 Penicillin-binding protein 5, C-terminal domain DJ48_96 PF00768 D-alanyl-D-alanine carboxypeptidase DJ48_961 PF00005 ABC transporter DJ48_965 PF00391 PEP-utilising enzyme, mobile domain DJ48_965 PF00224 Pyruvate kinase, barrel domain DJ48_965 PF02887 Pyruvate kinase, alpha/beta domain DJ48_967 PF00881 Nitroreductase family DJ48_968 PF01638 HxlR-like helix-turn-helix DJ48_97 PF01740 STAS domain DJ48_971 PF13393 Histidyl-tRNA synthetase DJ48_971 PF03129 Anticodon binding domain DJ48_972 PF04073 Aminoacyl-tRNA editing domain DJ48_973 PF02660 Glycerol-3-phosphate acyltransferase DJ48_974 PF01381 Helix-turn-helix DJ48_977 PF04231 Endonuclease I DJ48_978 PF03606 C4-dicarboxylate anaerobic carrier DJ48_979 PF03737 Aldolase/RraA DJ48_98 PF13581 Histidine kinase-like ATPase domain DJ48_982 PF02361 Cobalt transport protein DJ48_983 PF00005 ABC transporter DJ48_985 PF14256 YwiC-like protein DJ48_989 PF02525 Flavodoxin-like fold DJ48_99 PF04542 Sigma-70 region 2 DJ48_99 PF04539 Sigma-70 region 3 DJ48_99 PF04545 Sigma-70, region 4 DJ48_991 PF02667 Short chain fatty acid transporter DJ48_992 PF01289 Thiol-activated cytolysin DJ48_992 PF17440 Thiol-activated cytolysin beta sandwich domain DJ48_993 PF00440 Bacterial regulatory proteins, tetR family DJ48_994 PF00893 Small Multidrug Resistance protein DJ48_995 PF17314 Family of unknown function (DUF5360) DJ48_997 PF13396 Phospholipase_D-nuclease N-terminal DJ48_998 PF00005 ABC transporter DJ48_999 PF00005 ABC transporter DJ48_999 PF13732 Domain of unknown function (DUF4162)