locus-tag	class	description
DJ48_100	COG0733	neurotransmitter:sodium symporter activity
DJ48_1000	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
DJ48_1003	COG2814	Major facilitator Superfamily
DJ48_1004	COG1846	Transcriptional regulator
DJ48_1006	COG0477	Major facilitator Superfamily
DJ48_1013	COG5632	N-Acetylmuramoyl-L-alanine amidase
DJ48_1013	COG3409	Peptidoglycan-binding domain 1 protein
DJ48_1016	COG2207	Transcriptional regulator
DJ48_1016	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DJ48_1017	COG0662	Cupin 2, conserved barrel domain protein
DJ48_1020	COG1595	DNA-templated transcription, initiation
DJ48_1024	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DJ48_1027	COG0531	amino acid
DJ48_1028	COG1522	sequence-specific DNA binding
DJ48_1029	COG1335	isochorismatase
DJ48_1031	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
DJ48_1032	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DJ48_1033	COG1760	l-serine dehydratase
DJ48_1034	COG1760	l-serine dehydratase
DJ48_1035	COG0814	amino acid
DJ48_1038	COG1309	transcriptional regulator
DJ48_1039	COG2814	Major facilitator Superfamily
DJ48_1040	COG2184	nucleotidyltransferase activity
DJ48_1043	COG0534	Mate efflux family protein
DJ48_105	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DJ48_1050	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DJ48_1054	COG0457	Tetratricopeptide repeat
DJ48_1055	COG1609	Transcriptional regulator
DJ48_1056	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
DJ48_1057	COG0561	phosphatase activity
DJ48_1058	COG0673	inositol 2-dehydrogenase activity
DJ48_1059	COG0738	Major facilitator superfamily
DJ48_1063	COG1619	proteins homologs of microcin C7 resistance protein MccF
DJ48_1065	COG0583	DNA-binding transcription factor activity
DJ48_1067	COG1139	Iron-sulfur cluster binding protein
DJ48_1068	COG1556	Lactate utilization protein
DJ48_1069	COG2271	Major facilitator Superfamily
DJ48_1070	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DJ48_1071	COG2808	Putative FMN-binding domain
DJ48_1072	COG0456	acetyltransferase
DJ48_1073	COG1846	Transcriptional regulator
DJ48_1074	COG2364	Membrane
DJ48_1076	COG5002	protein histidine kinase activity
DJ48_1076	COG3850	Histidine kinase
DJ48_1079	COG0577	efflux transmembrane transporter activity
DJ48_108	COG0697	spore germination
DJ48_1080	COG1136	(ABC) transporter
DJ48_1083	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
DJ48_1084	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DJ48_1086	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJ48_1087	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJ48_109	COG0561	phosphatase activity
DJ48_1090	COG1476	TRANSCRIPTIONal
DJ48_1095	COG2515	1-aminocyclopropane-1-carboxylate deaminase
DJ48_11	COG3829	transcription factor binding
DJ48_11	COG3290	protein histidine kinase activity
DJ48_110	COG4086	secreted protein
DJ48_1100	COG5002	protein histidine kinase activity
DJ48_1100	COG3850	Histidine kinase
DJ48_1101	COG0745	RESPONSE REGULATOR receiver
DJ48_1106	COG2814	Major facilitator Superfamily
DJ48_111	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DJ48_1113	COG2169	Transcriptional regulator
DJ48_1117	COG0346	lactoylglutathione lyase activity
DJ48_112	COG0456	acetyltransferase
DJ48_1120	COG1522	sequence-specific DNA binding
DJ48_1123	COG0443	Heat shock 70 kDa protein
DJ48_1127	COG0640	Transcriptional regulator
DJ48_1128	COG0346	lactoylglutathione lyase activity
DJ48_1129	COG0798	PFAM Bile acid sodium symporter
DJ48_113	COG1547	Domain of unknown function (DUF309)
DJ48_1135	COG1121	(ABC) transporter
DJ48_1136	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DJ48_1137	COG0803	Belongs to the bacterial solute-binding protein 9 family
DJ48_1138	COG2267	carboxylic ester hydrolase activity
DJ48_1139	COG1575	Belongs to the MenA family. Type 1 subfamily
DJ48_1141	COG5609	conserved protein (DUF2294)
DJ48_1142	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DJ48_1144	COG0288	reversible hydration of carbon dioxide
DJ48_1145	COG0415	Belongs to the DNA photolyase family
DJ48_1152	COG0598	Magnesium transport protein CorA
DJ48_1153	COG1846	Transcriptional regulator
DJ48_1154	COG0583	DNA-binding transcription factor activity
DJ48_1158	COG1335	isochorismatase
DJ48_1159	COG2267	carboxylic ester hydrolase activity
DJ48_1160	COG0753	catalase activity
DJ48_1161	COG0737	Belongs to the 5'-nucleotidase family
DJ48_1167	COG1115	amino acid carrier protein
DJ48_1169	COG2066	Belongs to the glutaminase family
DJ48_1170	COG4191	Histidine kinase
DJ48_1171	COG0784	Response regulator, receiver
DJ48_1172	COG0697	spore germination
DJ48_1173	COG0531	amino acid
DJ48_1176	COG0281	malic enzyme
DJ48_1178	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DJ48_1179	COG1114	Component of the transport system for branched-chain amino acids
DJ48_118	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DJ48_1180	COG0531	amino acid
DJ48_1181	COG0531	amino acid
DJ48_1182	COG0322	excinuclease ABC activity
DJ48_1184	COG1396	sequence-specific DNA binding
DJ48_1185	COG0252	asparaginase activity
DJ48_1186	COG1027	Aspartate ammonia-lyase
DJ48_1189	COG1063	alcohol dehydrogenase
DJ48_1195	COG1113	amino acid transport
DJ48_1196	COG1113	amino acid transport
DJ48_1197	COG1280	lysine exporter protein (LysE YggA)
DJ48_1198	COG3403	YqcI/YcgG family
DJ48_12	COG0280	phosphate acetyltransferase
DJ48_1200	COG5577	PFAM Coat F domain
DJ48_1203	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJ48_1204	COG0574	Belongs to the PEP-utilizing enzyme family
DJ48_1204	COG3848	Pyruvate phosphate dikinase
DJ48_1207	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
DJ48_1214	COG1960	acyl-CoA dehydrogenase activity
DJ48_1216	COG0640	Transcriptional regulator
DJ48_1217	COG0860	N-Acetylmuramoyl-L-alanine amidase
DJ48_122	COG3711	transcriptional antiterminator
DJ48_1220	COG1414	Transcriptional regulator
DJ48_1221	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DJ48_1222	COG1984	allophanate hydrolase subunit 2
DJ48_1228	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DJ48_123	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJ48_123	COG1263	PTS System
DJ48_123	COG2190	(PTS) system
DJ48_1230	COG0768	penicillin binding
DJ48_1239	COG4335	DNA alkylation repair
DJ48_1241	COG0833	amino acid
DJ48_1243	COG0730	response to heat
DJ48_1249	COG0596	Alpha beta hydrolase
DJ48_1250	COG0745	RESPONSE REGULATOR receiver
DJ48_1251	COG0642	Histidine kinase
DJ48_1255	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DJ48_1259	COG0456	acetyltransferase
DJ48_1260	COG2207	Transcriptional regulator
DJ48_1265	COG0577	efflux transmembrane transporter activity
DJ48_1265	COG1136	(ABC) transporter
DJ48_1267	COG1725	Transcriptional regulator
DJ48_1274	COG1846	Transcriptional regulator
DJ48_1275	COG0778	Nitroreductase
DJ48_1277	COG0714	Associated with various cellular activities
DJ48_128	COG0778	Nitroreductase
DJ48_1283	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
DJ48_1285	COG0753	catalase activity
DJ48_1286	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DJ48_1288	COG0463	Glycosyl transferase, family 2
DJ48_129	COG3706	GGDEF domain
DJ48_1292	COG0463	Glycosyl transferase, family 2
DJ48_1297	COG0714	Associated with various cellular activities
DJ48_13	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DJ48_130	COG2084	Dehydrogenase
DJ48_1301	COG0346	lactoylglutathione lyase activity
DJ48_1302	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DJ48_1304	COG3279	Response regulator of the LytR AlgR family
DJ48_1306	COG4377	Putative membrane peptidase family (DUF2324)
DJ48_1309	COG3655	Transcriptional regulator
DJ48_131	COG2084	Dehydrogenase
DJ48_1311	COG1785	Belongs to the alkaline phosphatase family
DJ48_1312	COG3239	Fatty acid desaturase
DJ48_1313	COG1690	Belongs to the RtcB family
DJ48_1314	COG0833	amino acid
DJ48_1315	COG1414	Transcriptional regulator
DJ48_1316	COG4187	Peptidase family M20/M25/M40
DJ48_1317	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DJ48_1318	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DJ48_1320	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DJ48_1324	COG2329	Antibiotic biosynthesis monooxygenase
DJ48_1330	COG1070	Carbohydrate kinase
DJ48_1331	COG2390	Transcriptional regulator
DJ48_1333	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ48_1335	COG1879	ABC-type sugar transport system periplasmic component
DJ48_1341	COG1595	DNA-templated transcription, initiation
DJ48_1344	COG3584	3D domain protein
DJ48_1344	COG1388	LysM domain
DJ48_1351	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
DJ48_1351	COG1605	Chorismate mutase
DJ48_1352	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
DJ48_1353	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DJ48_1354	COG0287	Prephenate dehydrogenase
DJ48_1358	COG1309	transcriptional regulator
DJ48_1359	COG2409	Drug exporters of the RND superfamily
DJ48_1359	COG1033	growth of symbiont in host cell
DJ48_1361	COG0488	(ABC) transporter
DJ48_1362	COG1368	sulfuric ester hydrolase activity
DJ48_1363	COG0861	Integral membrane protein TerC family
DJ48_1365	COG0726	polysaccharide deacetylase
DJ48_1367	COG4912	Dna alkylation repair
DJ48_1371	COG2318	DinB family
DJ48_1372	COG0697	spore germination
DJ48_1377	COG2746	aminoglycoside 3-N-acetyltransferase activity
DJ48_138	COG0436	Aminotransferase
DJ48_1385	COG1116	anion transmembrane transporter activity
DJ48_1386	COG1116	anion transmembrane transporter activity
DJ48_1387	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DJ48_1388	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DJ48_1389	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DJ48_139	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DJ48_1391	COG0628	permease
DJ48_1399	COG1131	(ABC) transporter
DJ48_1403	COG5146	pantothenate kinase activity
DJ48_1404	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DJ48_1405	COG0436	Aminotransferase
DJ48_1412	COG2226	methyltransferase
DJ48_1415	COG2261	transglycosylase associated protein
DJ48_1419	COG2814	Major facilitator Superfamily
DJ48_1419	COG0477	Major facilitator Superfamily
DJ48_1420	COG4533	DNA binding
DJ48_1421	COG0789	Transcriptional regulator
DJ48_1422	COG1664	Polymer-forming cytoskeletal
DJ48_1424	COG2814	Major facilitator Superfamily
DJ48_1428	COG1307	EDD domain protein, DegV family
DJ48_143	COG1028	Short-chain dehydrogenase reductase Sdr
DJ48_1430	COG1164	Oligoendopeptidase f
DJ48_1437	COG0745	RESPONSE REGULATOR receiver
DJ48_1438	COG5002	protein histidine kinase activity
DJ48_1439	COG2936	dipeptidyl-peptidase activity
DJ48_144	COG1695	Transcriptional regulator
DJ48_1446	COG4948	Mandelate Racemase Muconate Lactonizing
DJ48_1448	COG4166	transmembrane transport
DJ48_1449	COG0519	Catalyzes the synthesis of GMP from XMP
DJ48_1450	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DJ48_1453	COG0586	Pfam SNARE associated Golgi protein
DJ48_1461	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DJ48_1462	COG3938	Belongs to the proline racemase family
DJ48_1464	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DJ48_1465	COG1012	belongs to the aldehyde dehydrogenase family
DJ48_1466	COG1115	amino acid carrier protein
DJ48_1467	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DJ48_1469	COG3397	chitin binding
DJ48_1474	COG4637	Psort location Cytoplasmic, score
DJ48_1478	COG0514	ATP-dependent DNA helicase (RecQ)
DJ48_1479	COG2105	PFAM AIG2 family protein
DJ48_1482	COG3973	AAA domain
DJ48_1493	COG2333	competence protein COMEC
DJ48_1493	COG0658	competence protein
DJ48_1498	COG2205	protein histidine kinase activity
DJ48_15	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DJ48_1502	COG3397	chitin binding
DJ48_1503	COG2153	protein acetylation
DJ48_1504	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DJ48_1507	COG0740	serine-type endopeptidase activity
DJ48_1509	COG0517	IMP dehydrogenase activity
DJ48_1509	COG4175	Glycine betaine
DJ48_151	COG0183	Belongs to the thiolase family
DJ48_1510	COG4176	ABC-type proline glycine betaine transport system permease component
DJ48_1516	COG0456	acetyltransferase
DJ48_1516	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DJ48_1517	COG1028	Short-chain dehydrogenase reductase Sdr
DJ48_1519	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DJ48_1520	COG0022	dehydrogenase e1 component
DJ48_1521	COG0508	dehydrogenase complex catalyzes the overall conversion of
DJ48_1522	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DJ48_1526	COG1959	2 iron, 2 sulfur cluster binding
DJ48_1531	COG1349	DNA-binding transcription factor activity
DJ48_1535	COG3284	Transcriptional regulator
DJ48_1541	COG1309	transcriptional regulator
DJ48_1542	COG3844	kynureninase activity
DJ48_1543	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
DJ48_1544	COG3483	tryptophan 2,3-dioxygenase activity
DJ48_1547	COG3409	Peptidoglycan-binding domain 1 protein
DJ48_1547	COG3773	Cell wall hydrolase
DJ48_1548	COG2959	enzyme of heme biosynthesis
DJ48_1551	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DJ48_1552	COG4129	membrane
DJ48_1558	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DJ48_1559	COG0697	spore germination
DJ48_1561	COG0201	protein transport
DJ48_1565	COG3227	Zinc metalloprotease (Elastase)
DJ48_1566	COG1523	belongs to the glycosyl hydrolase 13 family
DJ48_1569	COG0076	glutamate decarboxylase activity
DJ48_1573	COG1011	Hydrolase
DJ48_1578	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DJ48_1586	COG0322	excinuclease ABC activity
DJ48_1589	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DJ48_159	COG3842	ATPase activity
DJ48_1594	COG4667	esterase of the alpha-beta hydrolase superfamily
DJ48_16	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DJ48_160	COG0366	Alpha amylase catalytic
DJ48_1600	COG3878	Protein conserved in bacteria
DJ48_1607	COG1051	belongs to the nudix hydrolase family
DJ48_1608	COG0592	DNA-directed DNA polymerase activity
DJ48_1609	COG2816	NAD+ diphosphatase activity
DJ48_1611	COG2223	nitrite transmembrane transporter activity
DJ48_1618	COG0697	spore germination
DJ48_1619	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DJ48_162	COG2182	Extracellular solute-binding protein
DJ48_1620	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DJ48_1623	COG0584	glycerophosphoryl diester phosphodiesterase
DJ48_1627	COG2814	Major facilitator Superfamily
DJ48_163	COG1175	transmembrane transport
DJ48_1632	COG0693	protein deglycase activity
DJ48_1638	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DJ48_164	COG3833	ABC-type maltose transport systems, permease component
DJ48_1642	COG0604	alcohol dehydrogenase
DJ48_1645	COG2205	protein histidine kinase activity
DJ48_1648	COG1122	ATPase activity
DJ48_165	COG1609	Transcriptional regulator
DJ48_1650	COG1794	racemase activity, acting on amino acids and derivatives
DJ48_1651	COG1819	glycosyl
DJ48_1653	COG5002	protein histidine kinase activity
DJ48_1655	COG0561	phosphatase activity
DJ48_166	COG0436	Aminotransferase
DJ48_1662	COG2124	cytochrome p450
DJ48_1678	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DJ48_168	COG2205	protein histidine kinase activity
DJ48_1680	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DJ48_1681	COG0460	homoserine dehydrogenase
DJ48_1685	COG0577	efflux transmembrane transporter activity
DJ48_1686	COG1136	(ABC) transporter
DJ48_1691	COG2205	protein histidine kinase activity
DJ48_1693	COG0745	RESPONSE REGULATOR receiver
DJ48_1695	COG3773	Cell wall hydrolase
DJ48_1698	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DJ48_17	COG0022	dehydrogenase e1 component
DJ48_170	COG3209	COG3209 Rhs family protein
DJ48_1701	COG1063	alcohol dehydrogenase
DJ48_1703	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DJ48_1707	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DJ48_1711	COG2814	Major facilitator Superfamily
DJ48_1713	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DJ48_1716	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DJ48_1716	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DJ48_1721	COG3227	Zinc metalloprotease (Elastase)
DJ48_1725	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DJ48_1730	COG1686	Belongs to the peptidase S11 family
DJ48_1731	COG2318	DinB family
DJ48_1733	COG0572	uridine kinase
DJ48_1734	COG1247	-acetyltransferase
DJ48_1736	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DJ48_1737	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DJ48_1738	COG1024	Enoyl-CoA hydratase
DJ48_1739	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DJ48_174	COG2814	Major facilitator Superfamily
DJ48_1740	COG0511	ligase activity, forming carbon-carbon bonds
DJ48_1741	COG0439	Biotin carboxylase
DJ48_1742	COG1960	acyl-CoA dehydrogenase activity
DJ48_1747	COG1131	(ABC) transporter
DJ48_1750	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DJ48_1751	COG1252	NADH dehydrogenase
DJ48_1753	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DJ48_1757	COG1309	transcriptional regulator
DJ48_1762	COG1876	peptidase activity
DJ48_1765	COG1476	TRANSCRIPTIONal
DJ48_1766	COG0457	Tetratricopeptide repeat
DJ48_1768	COG0737	Belongs to the 5'-nucleotidase family
DJ48_1771	COG3718	enzyme involved in inositol metabolism
DJ48_1777	COG0673	inositol 2-dehydrogenase activity
DJ48_1778	COG2814	Major facilitator Superfamily
DJ48_1779	COG1609	Transcriptional regulator
DJ48_1780	COG2367	Beta-lactamase
DJ48_1782	COG0768	penicillin binding
DJ48_1784	COG1595	DNA-templated transcription, initiation
DJ48_1788	COG2195	Cleaves the N-terminal amino acid of tripeptides
DJ48_1796	COG1846	Transcriptional regulator
DJ48_1797	COG3961	Belongs to the TPP enzyme family
DJ48_1798	COG2226	methyltransferase
DJ48_18	COG0508	dehydrogenase complex catalyzes the overall conversion of
DJ48_1800	COG3615	Tellurite resistance protein tehB
DJ48_1800	COG0500	methyltransferase
DJ48_1801	COG0577	efflux transmembrane transporter activity
DJ48_1801	COG1136	(ABC) transporter
DJ48_1804	COG1309	transcriptional regulator
DJ48_1809	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJ48_181	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DJ48_1813	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DJ48_1814	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DJ48_1815	COG2971	BadF BadG BcrA BcrD
DJ48_1820	COG1649	PFAM Uncharacterised BCR, COG1649
DJ48_1825	COG1595	DNA-templated transcription, initiation
DJ48_183	COG1408	metallophosphoesterase
DJ48_1830	COG1396	sequence-specific DNA binding
DJ48_1834	COG1132	(ABC) transporter
DJ48_1835	COG1132	(ABC) transporter
DJ48_1838	COG2258	MOSC domain
DJ48_1839	COG0583	DNA-binding transcription factor activity
DJ48_184	COG1028	Short-chain dehydrogenase reductase Sdr
DJ48_1842	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DJ48_1843	COG0583	DNA-binding transcription factor activity
DJ48_185	COG2200	EAL domain
DJ48_1851	COG0561	phosphatase activity
DJ48_1852	COG0010	Belongs to the arginase family
DJ48_1855	COG1278	Cold shock
DJ48_1857	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DJ48_1865	COG1247	-acetyltransferase
DJ48_1873	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJ48_188	COG4703	Protein of unknown function (DUF1797)
DJ48_1882	COG2226	methyltransferase
DJ48_1887	COG2814	Major facilitator Superfamily
DJ48_1888	COG0596	Alpha beta hydrolase
DJ48_1890	COG1136	(ABC) transporter
DJ48_1891	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DJ48_1892	COG1187	pseudouridine synthase activity
DJ48_1893	COG1187	pseudouridine synthase activity
DJ48_1894	COG2329	Antibiotic biosynthesis monooxygenase
DJ48_1897	COG1115	amino acid carrier protein
DJ48_1899	COG2318	DinB family
DJ48_19	COG0772	Belongs to the SEDS family
DJ48_190	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
DJ48_1901	COG0776	regulation of translation
DJ48_1904	COG2814	Major facilitator Superfamily
DJ48_1905	COG3251	PFAM MbtH domain protein
DJ48_1906	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DJ48_1907	COG3433	isochorismatase activity
DJ48_1907	COG1535	isochorismatase
DJ48_1908	COG1021	2,3-dihydroxybenzoate-AMP ligase
DJ48_1909	COG1169	isochorismate synthase
DJ48_1910	COG1028	Short-chain dehydrogenase reductase Sdr
DJ48_1911	COG2223	nitrite transmembrane transporter activity
DJ48_1915	COG0419	ATPase involved in DNA repair
DJ48_1916	COG0420	3'-5' exonuclease activity
DJ48_1919	COG1024	Enoyl-CoA hydratase
DJ48_192	COG0517	IMP dehydrogenase activity
DJ48_1920	COG1280	lysine exporter protein (LysE YggA)
DJ48_1921	COG1012	belongs to the aldehyde dehydrogenase family
DJ48_1922	COG2084	Dehydrogenase
DJ48_1923	COG2084	Dehydrogenase
DJ48_1924	COG1960	acyl-CoA dehydrogenase activity
DJ48_1925	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
DJ48_1926	COG2079	MmgE PrpD family protein
DJ48_1927	COG0372	Belongs to the citrate synthase family
DJ48_1928	COG4841	protein insertion into membrane
DJ48_1929	COG2814	Major facilitator Superfamily
DJ48_193	COG0583	DNA-binding transcription factor activity
DJ48_1930	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DJ48_1930	COG4499	WXG100 protein secretion system (Wss), protein YukC
DJ48_1938	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DJ48_1954	COG1715	Restriction endonuclease
DJ48_1954	COG1787	Restriction endonuclease
DJ48_1959	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DJ48_1960	COG0671	phosphoesterase, PA-phosphatase related
DJ48_1961	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DJ48_1962	COG4326	sporulation control protein
DJ48_197	COG0569	domain protein
DJ48_1970	COG1509	lysine 2,3-aminomutase activity
DJ48_1971	COG3829	transcription factor binding
DJ48_1972	COG0456	acetyltransferase
DJ48_1973	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DJ48_1974	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DJ48_1975	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DJ48_1976	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DJ48_1979	COG5506	Protein of unknown function (DUF1694)
DJ48_198	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DJ48_1980	COG1012	belongs to the aldehyde dehydrogenase family
DJ48_1981	COG1253	flavin adenine dinucleotide binding
DJ48_1988	COG1174	glycine betaine transport
DJ48_1989	COG0517	IMP dehydrogenase activity
DJ48_1989	COG1125	glycine betaine transport
DJ48_1996	COG1070	Carbohydrate kinase
DJ48_2	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
DJ48_20	COG2816	NAD+ diphosphatase activity
DJ48_200	COG0561	phosphatase activity
DJ48_2002	COG1064	alcohol dehydrogenase
DJ48_2003	COG1737	Transcriptional regulator
DJ48_2005	COG2197	response regulator
DJ48_2006	COG4585	Histidine kinase
DJ48_2006	COG2203	Gaf domain
DJ48_2007	COG0668	transmembrane transport
DJ48_2008	COG0071	Belongs to the small heat shock protein (HSP20) family
DJ48_2009	COG1051	belongs to the nudix hydrolase family
DJ48_201	COG0242	peptide deformylase activity
DJ48_2010	COG1335	isochorismatase
DJ48_2014	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DJ48_2015	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DJ48_2019	COG0367	asparagine synthase
DJ48_2020	COG0071	Belongs to the small heat shock protein (HSP20) family
DJ48_2021	COG1999	signal sequence binding
DJ48_2022	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DJ48_2023	COG1307	EDD domain protein, DegV family
DJ48_2025	COG0805	protein transport
DJ48_2027	COG1272	protein, Hemolysin III
DJ48_2028	COG0204	Acyl-transferase
DJ48_2029	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DJ48_203	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DJ48_2030	COG0768	penicillin binding
DJ48_2033	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DJ48_2037	COG0546	phosphoglycolate phosphatase activity
DJ48_2039	COG4473	ABC transporter
DJ48_204	COG0022	dehydrogenase e1 component
DJ48_2040	COG1131	(ABC) transporter
DJ48_2042	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DJ48_2044	COG0456	acetyltransferase
DJ48_2046	COG1794	racemase activity, acting on amino acids and derivatives
DJ48_2047	COG1454	alcohol dehydrogenase
DJ48_2048	COG2610	gluconate transmembrane transporter activity
DJ48_2053	COG0733	neurotransmitter:sodium symporter activity
DJ48_2056	COG3850	Histidine kinase
DJ48_2056	COG5002	protein histidine kinase activity
DJ48_2057	COG0745	RESPONSE REGULATOR receiver
DJ48_2058	COG0471	metal ion transport
DJ48_2059	COG1929	Belongs to the glycerate kinase type-1 family
DJ48_2076	COG1674	ftsk spoiiie
DJ48_2080	COG0017	Asparaginyl-tRNA synthetase
DJ48_2081	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DJ48_2084	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DJ48_2090	COG0018	arginyl-trna synthetase
DJ48_2091	COG2136	Putative SAM-dependent methyltransferase
DJ48_2091	COG2521	methyltransferase
DJ48_2094	COG1413	lyase activity
DJ48_2095	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DJ48_2098	COG0629	single-stranded DNA binding
DJ48_2101	COG0488	(ABC) transporter
DJ48_2102	COG1418	mRNA catabolic process
DJ48_2105	COG5632	N-Acetylmuramoyl-L-alanine amidase
DJ48_2108	COG2359	stage V sporulation protein S
DJ48_2115	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
DJ48_2116	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DJ48_2117	COG2146	nitrite reductase [NAD(P)H] activity
DJ48_2118	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DJ48_2118	COG1587	Uroporphyrinogen-III synthase
DJ48_2120	COG1648	precorrin-2 dehydrogenase activity
DJ48_2123	COG2223	nitrite transmembrane transporter activity
DJ48_2125	COG0314	molybdopterin synthase activity
DJ48_2126	COG0303	'Molybdopterin
DJ48_2127	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DJ48_2128	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DJ48_2129	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DJ48_2131	COG1131	(ABC) transporter
DJ48_2133	COG2181	nitrate reductase activity
DJ48_2134	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
DJ48_2135	COG1140	nitrate reductase beta subunit
DJ48_2136	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DJ48_2139	COG0714	Associated with various cellular activities
DJ48_214	COG1982	Orn Lys Arg decarboxylase major
DJ48_2140	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
DJ48_2141	COG1305	Transglutaminase-like
DJ48_2142	COG0386	Belongs to the glutathione peroxidase family
DJ48_2147	COG1595	DNA-templated transcription, initiation
DJ48_2148	COG0604	alcohol dehydrogenase
DJ48_2150	COG0346	lactoylglutathione lyase activity
DJ48_2151	COG1082	Xylose isomerase domain protein TIM barrel
DJ48_2155	COG2226	methyltransferase
DJ48_2160	COG3874	Sporulation protein YtfJ
DJ48_2169	COG0456	acetyltransferase
DJ48_2175	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DJ48_2176	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DJ48_2177	COG1819	glycosyl
DJ48_218	COG0483	inositol monophosphate 1-phosphatase activity
DJ48_2181	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DJ48_2183	COG0561	phosphatase activity
DJ48_2187	COG2211	Major facilitator Superfamily
DJ48_2188	COG0154	amidase activity
DJ48_2190	COG1876	peptidase activity
DJ48_2192	COG0860	N-Acetylmuramoyl-L-alanine amidase
DJ48_2196	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DJ48_2197	COG1114	Component of the transport system for branched-chain amino acids
DJ48_2200	COG1253	flavin adenine dinucleotide binding
DJ48_2201	COG2839	Protein conserved in bacteria
DJ48_2202	COG0702	epimerase
DJ48_2205	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DJ48_2206	COG1607	acyl-coa hydrolase
DJ48_2207	COG3689	TIGRFAM TIGR03943 family protein
DJ48_2208	COG0701	Predicted permease
DJ48_2210	COG2244	polysaccharide biosynthetic process
DJ48_2211	COG0586	Pfam SNARE associated Golgi protein
DJ48_2212	COG1051	belongs to the nudix hydrolase family
DJ48_2213	COG5337	Spore coat protein CotH
DJ48_2215	COG0406	alpha-ribazole phosphatase activity
DJ48_2218	COG4166	transmembrane transport
DJ48_2220	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DJ48_2222	COG0702	epimerase
DJ48_2224	COG0803	Belongs to the bacterial solute-binding protein 9 family
DJ48_2224	COG3443	Belongs to the bacterial solute-binding protein 9 family
DJ48_223	COG4896	Protein conserved in bacteria
DJ48_2235	COG0456	acetyltransferase
DJ48_2236	COG0523	cobalamin synthesis protein
DJ48_2237	COG4989	oxidoreductase activity
DJ48_2239	COG1231	oxidoreductase activity
DJ48_2241	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DJ48_2244	COG0783	Belongs to the Dps family
DJ48_2245	COG3949	Membrane
DJ48_2248	COG0840	transmembrane signaling receptor activity
DJ48_225	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
DJ48_2253	COG2814	Major facilitator Superfamily
DJ48_2254	COG0667	Aldo Keto reductase
DJ48_2255	COG0640	Transcriptional regulator
DJ48_2256	COG1404	Belongs to the peptidase S8 family
DJ48_2257	COG2002	toxin-antitoxin pair type II binding
DJ48_2258	COG0577	efflux transmembrane transporter activity
DJ48_226	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DJ48_2265	COG1752	Esterase of the alpha-beta hydrolase superfamily
DJ48_2267	COG1279	arginine transmembrane transporter activity
DJ48_2268	COG2814	Major facilitator Superfamily
DJ48_227	COG4838	Belongs to the UPF0358 family
DJ48_2270	COG1082	Xylose isomerase domain protein TIM barrel
DJ48_2273	COG0318	PFAM AMP-dependent synthetase and ligase
DJ48_2274	COG4264	IucA IucC family
DJ48_2276	COG1247	-acetyltransferase
DJ48_2277	COG1285	pathogenesis
DJ48_2279	COG0726	polysaccharide deacetylase
DJ48_228	COG0772	Belongs to the SEDS family
DJ48_2280	COG5002	protein histidine kinase activity
DJ48_2281	COG0745	RESPONSE REGULATOR receiver
DJ48_2283	COG1316	TRANSCRIPTIONal
DJ48_2288	COG0460	homoserine dehydrogenase
DJ48_229	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
DJ48_2292	COG0726	polysaccharide deacetylase
DJ48_2294	COG0300	oxidoreductase activity
DJ48_2296	COG5002	protein histidine kinase activity
DJ48_2297	COG0745	RESPONSE REGULATOR receiver
DJ48_2298	COG1132	(ABC) transporter
DJ48_23	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJ48_2300	COG0791	NLP P60 protein
DJ48_2300	COG1388	LysM domain
DJ48_2302	COG1686	Belongs to the peptidase S11 family
DJ48_2306	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DJ48_2307	COG4988	ABC transporter
DJ48_2308	COG1294	oxidase, subunit
DJ48_2309	COG1271	oxidase subunit
DJ48_2311	COG1846	Transcriptional regulator
DJ48_2315	COG0583	DNA-binding transcription factor activity
DJ48_2319	COG0411	ABC transporter
DJ48_2321	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DJ48_2322	COG2030	dehydratase
DJ48_2323	COG0318	PFAM AMP-dependent synthetase and ligase
DJ48_2326	COG0523	cobalamin synthesis protein
DJ48_2327	COG1231	oxidoreductase activity
DJ48_2328	COG0039	L-malate dehydrogenase activity
DJ48_2329	COG0628	permease
DJ48_2333	COG0778	Nitroreductase
DJ48_2334	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
DJ48_2335	COG1959	2 iron, 2 sulfur cluster binding
DJ48_2336	COG0583	DNA-binding transcription factor activity
DJ48_2337	COG0697	spore germination
DJ48_2339	COG4549	nuclear export factor GLE1
DJ48_2340	COG2372	response to copper ion
DJ48_2340	COG1276	copper resistance
DJ48_2342	COG1114	Component of the transport system for branched-chain amino acids
DJ48_2343	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DJ48_2349	COG2132	Multicopper oxidase
DJ48_2350	COG0006	proline dipeptidase activity
DJ48_2356	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
DJ48_2357	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DJ48_2359	COG2390	Transcriptional regulator
DJ48_236	COG3336	cytochrome c oxidase
DJ48_2364	COG0531	amino acid
DJ48_2365	COG0531	amino acid
DJ48_2367	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DJ48_2370	COG1914	H( )-stimulated, divalent metal cation uptake system
DJ48_2374	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DJ48_2379	COG4166	transmembrane transport
DJ48_2380	COG1073	alpha beta
DJ48_2384	COG0427	acetyl-CoA hydrolase
DJ48_2385	COG3279	Response regulator of the LytR AlgR family
DJ48_2388	COG3384	dioxygenase
DJ48_2389	COG2814	Major facilitator Superfamily
DJ48_239	COG2340	Cysteine-rich secretory protein family
DJ48_2393	COG2843	Capsule synthesis protein
DJ48_2395	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DJ48_2397	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DJ48_2398	COG0440	acetolactate synthase activity
DJ48_2399	COG0028	Belongs to the TPP enzyme family
DJ48_24	COG0765	amino acid transport
DJ48_2400	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DJ48_2402	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DJ48_2406	COG2084	Dehydrogenase
DJ48_2409	COG2323	membrane
DJ48_2410	COG5566	PFAM Mor transcription activator
DJ48_2412	COG0733	neurotransmitter:sodium symporter activity
DJ48_2413	COG2244	polysaccharide biosynthetic process
DJ48_2416	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DJ48_2417	COG2223	nitrite transmembrane transporter activity
DJ48_2418	COG4166	transmembrane transport
DJ48_2419	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DJ48_242	COG0406	alpha-ribazole phosphatase activity
DJ48_2421	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DJ48_2422	COG0477	Major facilitator Superfamily
DJ48_2424	COG1966	Carbon starvation protein
DJ48_2429	COG0860	N-Acetylmuramoyl-L-alanine amidase
DJ48_243	COG3679	Belongs to the UPF0342 family
DJ48_2430	COG1051	belongs to the nudix hydrolase family
DJ48_2440	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DJ48_2441	COG0784	Response regulator, receiver
DJ48_2442	COG4191	Histidine kinase
DJ48_2443	COG0281	malic enzyme
DJ48_2444	COG1027	Aspartate ammonia-lyase
DJ48_2446	COG0528	UMP kinase activity
DJ48_2447	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DJ48_2450	COG1131	(ABC) transporter
DJ48_2456	COG2733	membrane
DJ48_246	COG0742	ribosomal rna small subunit methyltransferase
DJ48_2463	COG0785	Cytochrome C biogenesis protein
DJ48_2467	COG3340	Belongs to the peptidase S51 family
DJ48_2468	COG0534	Mate efflux family protein
DJ48_247	COG3314	Sporulation integral membrane protein YlbJ
DJ48_2472	COG0114	fumarate hydratase activity
DJ48_2473	COG0114	fumarate hydratase activity
DJ48_2474	COG1757	Na H antiporter
DJ48_2475	COG0438	transferase activity, transferring glycosyl groups
DJ48_2475	COG1216	Glycosyl transferase, family 2
DJ48_2477	COG0701	Predicted permease
DJ48_2478	COG0523	cobalamin synthesis protein
DJ48_2479	COG0697	spore germination
DJ48_2480	COG1802	Transcriptional regulator
DJ48_2486	COG0367	asparagine synthase
DJ48_2488	COG1846	Transcriptional regulator
DJ48_249	COG1752	Esterase of the alpha-beta hydrolase superfamily
DJ48_2492	COG0406	alpha-ribazole phosphatase activity
DJ48_2494	COG1686	Belongs to the peptidase S11 family
DJ48_2499	COG1234	tRNA 3'-trailer cleavage
DJ48_25	COG1126	abc transporter atp-binding protein
DJ48_250	COG3480	Lon protease (S16) C-terminal proteolytic domain
DJ48_2500	COG1177	transmembrane transport
DJ48_2501	COG0725	ABC transporter, periplasmic molybdate-binding protein
DJ48_2502	COG3842	ATPase activity
DJ48_2509	COG2329	Antibiotic biosynthesis monooxygenase
DJ48_2513	COG1309	transcriptional regulator
DJ48_2518	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DJ48_2519	COG4786	Flagellar basal body rod
DJ48_252	COG0582	viral genome integration into host DNA
DJ48_2520	COG1419	protein localization to endoplasmic reticulum
DJ48_2521	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DJ48_2522	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DJ48_2524	COG1987	bacterial-type flagellum assembly
DJ48_2525	COG1338	Plays a role in the flagellum-specific transport system
DJ48_2527	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DJ48_2527	COG1776	CheC inhibitor of MCP methylation
DJ48_2528	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DJ48_2529	COG0741	lytic transglycosylase activity
DJ48_2531	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DJ48_2536	COG0457	Tetratricopeptide repeat
DJ48_2536	COG0463	Glycosyl transferase, family 2
DJ48_2542	COG0463	Glycosyl transferase, family 2
DJ48_2544	COG0835	chemotaxis
DJ48_2544	COG0784	Response regulator, receiver
DJ48_2551	COG1157	protein secretion by the type III secretion system
DJ48_2553	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DJ48_2554	COG1766	The M ring may be actively involved in energy transduction
DJ48_2555	COG1677	Flagellar hook-basal body complex protein FliE
DJ48_2556	COG1558	bacterial-type flagellum-dependent cell motility
DJ48_2557	COG1815	bacterial-type flagellum-dependent cell motility
DJ48_256	COG1396	sequence-specific DNA binding
DJ48_2561	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DJ48_2562	COG1256	bacterial-type flagellum assembly
DJ48_2566	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DJ48_2569	COG1776	CheC inhibitor of MCP methylation
DJ48_2569	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DJ48_2570	COG0643	Histidine kinase
DJ48_2570	COG2198	Histidine kinase
DJ48_2571	COG2201	protein-glutamate methylesterase activity
DJ48_2572	COG1360	Flagellar Motor Protein
DJ48_2573	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DJ48_2575	COG1923	regulation of RNA biosynthetic process
DJ48_2587	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DJ48_2588	COG2323	membrane
DJ48_259	COG1396	sequence-specific DNA binding
DJ48_2590	COG4978	Transcriptional regulator
DJ48_2590	COG0789	Transcriptional regulator
DJ48_2591	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DJ48_2592	COG0475	glutathione-regulated potassium exporter activity
DJ48_2594	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DJ48_2595	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DJ48_2596	COG3162	membrane
DJ48_2599	COG1280	lysine exporter protein (LysE YggA)
DJ48_26	COG4129	membrane
DJ48_2607	COG0328	RNA-DNA hybrid ribonuclease activity
DJ48_2611	COG0454	-acetyltransferase
DJ48_2614	COG0438	transferase activity, transferring glycosyl groups
DJ48_2615	COG1215	transferase activity, transferring glycosyl groups
DJ48_2618	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DJ48_2622	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DJ48_2625	COG0754	glutathionylspermidine amidase activity
DJ48_2630	COG0456	acetyltransferase
DJ48_2632	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DJ48_2634	COG2311	Membrane
DJ48_2635	COG2233	PERMEase
DJ48_2637	COG0024	Methionine aminopeptidase
DJ48_2638	COG3173	Aminoglycoside phosphotransferase
DJ48_2640	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
DJ48_2641	COG1199	ATP-dependent helicase activity
DJ48_2643	COG0116	Belongs to the methyltransferase superfamily
DJ48_265	COG1484	DNA-dependent DNA replication
DJ48_2654	COG4499	WXG100 protein secretion system (Wss), protein YukC
DJ48_2654	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DJ48_2656	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DJ48_2657	COG3935	DnaD domain protein
DJ48_2661	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DJ48_2661	COG1199	ATP-dependent helicase activity
DJ48_2668	COG0438	transferase activity, transferring glycosyl groups
DJ48_2669	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DJ48_2672	COG1694	Mazg nucleotide pyrophosphohydrolase
DJ48_2673	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DJ48_2675	COG2738	Putative neutral zinc metallopeptidase
DJ48_2678	COG4347	Protein of unknown function (DUF1405)
DJ48_2680	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
DJ48_2684	COG0457	Tetratricopeptide repeat
DJ48_2685	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DJ48_2688	COG0105	UTP biosynthetic process
DJ48_2689	COG0142	geranyltranstransferase activity
DJ48_2691	COG0142	geranyltranstransferase activity
DJ48_2694	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DJ48_27	COG1376	ErfK ybiS ycfS ynhG family protein
DJ48_270	COG1191	sigma factor activity
DJ48_2708	COG0252	asparaginase activity
DJ48_2709	COG0492	ferredoxin-NADP+ reductase activity
DJ48_2713	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DJ48_2714	COG4862	establishment of competence for transformation
DJ48_2716	COG1408	metallophosphoesterase
DJ48_2718	COG1266	CAAX protease self-immunity
DJ48_2719	COG0514	ATP-dependent DNA helicase (RecQ)
DJ48_2721	COG1141	Ferredoxin
DJ48_2722	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DJ48_2725	COG2096	Adenosyltransferase
DJ48_2726	COG5002	protein histidine kinase activity
DJ48_2727	COG0745	RESPONSE REGULATOR receiver
DJ48_2728	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DJ48_2729	COG1333	cytochrome c biogenesis protein
DJ48_2731	COG1187	pseudouridine synthase activity
DJ48_2732	COG0700	Nucleoside recognition
DJ48_2733	COG2715	membrane protein required for spore maturation
DJ48_2734	COG1686	Belongs to the peptidase S11 family
DJ48_2735	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DJ48_2738	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DJ48_2738	COG0392	lysyltransferase activity
DJ48_2742	COG5002	protein histidine kinase activity
DJ48_2743	COG0582	viral genome integration into host DNA
DJ48_2745	COG1801	Protein of unknown function DUF72
DJ48_2746	COG3852	Histidine kinase
DJ48_2749	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DJ48_2750	COG1392	Phosphate transport regulator
DJ48_2751	COG0306	phosphate transporter
DJ48_2752	COG0306	phosphate transporter
DJ48_2753	COG0730	response to heat
DJ48_2756	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DJ48_2756	COG1017	nitric oxide dioxygenase activity
DJ48_2761	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DJ48_2763	COG1114	Component of the transport system for branched-chain amino acids
DJ48_2765	COG2197	response regulator
DJ48_2766	COG4585	Histidine kinase
DJ48_2767	COG4758	membrane
DJ48_2770	COG1757	Na H antiporter
DJ48_2774	COG0733	neurotransmitter:sodium symporter activity
DJ48_2775	COG1648	precorrin-2 dehydrogenase activity
DJ48_2779	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DJ48_2780	COG0529	Catalyzes the synthesis of activated sulfate
DJ48_2784	COG0019	diaminopimelate decarboxylase activity
DJ48_2786	COG1368	sulfuric ester hydrolase activity
DJ48_2787	COG1183	phosphatidylcholine synthase activity
DJ48_2790	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DJ48_2797	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DJ48_2802	COG0473	3-isopropylmalate dehydrogenase activity
DJ48_2804	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DJ48_2805	COG0440	acetolactate synthase activity
DJ48_2806	COG0028	Belongs to the TPP enzyme family
DJ48_2807	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DJ48_2812	COG3874	Sporulation protein YtfJ
DJ48_2813	COG4709	membrane
DJ48_2814	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DJ48_2815	COG1301	dicarboxylic acid transport
DJ48_2817	COG1846	Transcriptional regulator
DJ48_2820	COG1968	undecaprenyl-diphosphatase activity
DJ48_2821	COG0534	Mate efflux family protein
DJ48_2825	COG3173	Aminoglycoside phosphotransferase
DJ48_2828	COG0716	FMN binding
DJ48_2833	COG1696	Membrane protein involved in D-alanine export
DJ48_2835	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DJ48_2836	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DJ48_2837	COG2070	2-Nitropropane dioxygenase
DJ48_2838	COG1619	proteins homologs of microcin C7 resistance protein MccF
DJ48_2840	COG1335	isochorismatase
DJ48_2842	COG1522	sequence-specific DNA binding
DJ48_2845	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
DJ48_2846	COG1131	(ABC) transporter
DJ48_2848	COG1131	(ABC) transporter
DJ48_2849	COG1725	Transcriptional regulator
DJ48_285	COG0582	viral genome integration into host DNA
DJ48_2850	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DJ48_2851	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DJ48_2853	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DJ48_2854	COG1780	Probably involved in ribonucleotide reductase function
DJ48_2860	COG4873	Protein conserved in bacteria
DJ48_2863	COG0720	synthase
DJ48_2865	COG2205	protein histidine kinase activity
DJ48_2866	COG5002	protein histidine kinase activity
DJ48_2868	COG2318	DinB family
DJ48_2870	COG1846	Transcriptional regulator
DJ48_2871	COG3852	Histidine kinase
DJ48_2873	COG2861	carbohydrate metabolic process
DJ48_2875	COG0235	Class ii aldolase
DJ48_2879	COG1349	DNA-binding transcription factor activity
DJ48_2882	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DJ48_2885	COG3842	ATPase activity
DJ48_2886	COG3842	ATPase activity
DJ48_2888	COG1840	ABC-type Fe3 transport system, periplasmic component
DJ48_2891	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DJ48_2893	COG3243	poly(R)-hydroxyalkanoic acid synthase
DJ48_2894	COG1028	Short-chain dehydrogenase reductase Sdr
DJ48_2898	COG2030	dehydratase
DJ48_29	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DJ48_290	COG4626	Terminase
DJ48_290	COG1802	Transcriptional regulator
DJ48_2900	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DJ48_2901	COG0861	Integral membrane protein TerC family
DJ48_2902	COG2116	formate transmembrane transporter activity
DJ48_2904	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
DJ48_2908	COG2186	Transcriptional regulator
DJ48_2909	COG5002	protein histidine kinase activity
DJ48_2910	COG0745	RESPONSE REGULATOR receiver
DJ48_2912	COG3835	regulator
DJ48_2913	COG0277	FAD linked oxidase domain protein
DJ48_2914	COG0247	lactate metabolic process
DJ48_2915	COG2340	Cysteine-rich secretory protein family
DJ48_2917	COG0564	pseudouridine synthase activity
DJ48_2919	COG2409	Drug exporters of the RND superfamily
DJ48_2921	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DJ48_2922	COG1177	transmembrane transport
DJ48_2923	COG1176	ABC-type spermidine putrescine transport system, permease component I
DJ48_2924	COG3842	ATPase activity
DJ48_2925	COG1012	belongs to the aldehyde dehydrogenase family
DJ48_2932	COG0681	Belongs to the peptidase S26 family
DJ48_2933	COG1686	Belongs to the peptidase S11 family
DJ48_2935	COG2226	methyltransferase
DJ48_2946	COG1476	TRANSCRIPTIONal
DJ48_2948	COG0508	dehydrogenase complex catalyzes the overall conversion of
DJ48_2958	COG5634	Uncharacterized conserved protein (DUF2278)
DJ48_2959	COG1620	l-lactate permease
DJ48_2966	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DJ48_2966	COG0512	Glutamine amidotransferase of anthranilate synthase
DJ48_2969	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DJ48_2970	COG5492	domain, Protein
DJ48_2973	COG2382	esterase
DJ48_2974	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DJ48_2975	COG2153	protein acetylation
DJ48_2983	COG1091	dTDP-4-dehydrorhamnose reductase activity
DJ48_2986	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DJ48_2991	COG0457	Tetratricopeptide repeat
DJ48_2991	COG0463	Glycosyl transferase, family 2
DJ48_2995	COG1216	Glycosyl transferase, family 2
DJ48_2996	COG0772	Belongs to the SEDS family
DJ48_2999	COG0564	pseudouridine synthase activity
DJ48_30	COG2195	Cleaves the N-terminal amino acid of tripeptides
DJ48_3000	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DJ48_3001	COG2357	RelA SpoT domain protein
DJ48_3003	COG4116	CYTH
DJ48_3004	COG2346	COG2346, Truncated hemoglobins
DJ48_3007	COG1164	Oligoendopeptidase f
DJ48_3008	COG1164	Oligoendopeptidase f
DJ48_3010	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DJ48_3011	COG4862	establishment of competence for transformation
DJ48_3012	COG0861	Integral membrane protein TerC family
DJ48_3013	COG1393	Belongs to the ArsC family
DJ48_3015	COG4166	transmembrane transport
DJ48_3016	COG0534	Mate efflux family protein
DJ48_3017	COG4608	Belongs to the ABC transporter superfamily
DJ48_3018	COG0444	Belongs to the ABC transporter superfamily
DJ48_3019	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DJ48_3020	COG0601	transmembrane transport
DJ48_3021	COG4166	transmembrane transport
DJ48_3023	COG0180	Tryptophanyl-tRNA synthetase
DJ48_3025	COG5504	Zn-dependent protease
DJ48_3026	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DJ48_3027	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DJ48_3028	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DJ48_3031	COG2267	carboxylic ester hydrolase activity
DJ48_3033	COG0542	response to heat
DJ48_3035	COG0561	phosphatase activity
DJ48_3038	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DJ48_3040	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DJ48_3042	COG2996	Protein conserved in bacteria
DJ48_3046	COG0004	ammonium transporteR
DJ48_3047	COG0753	catalase activity
DJ48_3049	COG0367	asparagine synthase
DJ48_3054	COG0179	Fumarylacetoacetate (FAA) hydrolase
DJ48_3063	COG1074	ATP-dependent DNA helicase activity
DJ48_3064	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
DJ48_3066	COG0398	Pfam SNARE associated Golgi protein
DJ48_3067	COG4903	ComK protein
DJ48_307	COG4824	toxin secretion phage lysis holin
DJ48_3070	COG1278	Cold shock
DJ48_3072	COG2224	Isocitrate lyase
DJ48_3073	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DJ48_3074	COG0497	DNA recombination
DJ48_3077	COG0697	spore germination
DJ48_3078	COG0840	transmembrane signaling receptor activity
DJ48_3079	COG0501	Belongs to the peptidase M48B family
DJ48_3084	COG0745	RESPONSE REGULATOR receiver
DJ48_3085	COG2205	protein histidine kinase activity
DJ48_3087	COG2207	Transcriptional regulator
DJ48_3087	COG3708	Transcriptional regulator
DJ48_3088	COG1595	DNA-templated transcription, initiation
DJ48_3090	COG1078	dGTPase activity
DJ48_3091	COG1408	metallophosphoesterase
DJ48_3097	COG3209	COG3209 Rhs family protein
DJ48_3103	COG0318	PFAM AMP-dependent synthetase and ligase
DJ48_3105	COG0095	Lipoate-protein ligase
DJ48_3106	COG1234	tRNA 3'-trailer cleavage
DJ48_3108	COG1609	Transcriptional regulator
DJ48_3113	COG1511	domain protein
DJ48_3114	COG1309	transcriptional regulator
DJ48_3123	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
DJ48_3124	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DJ48_3125	COG2329	Antibiotic biosynthesis monooxygenase
DJ48_3126	COG3428	Bacterial PH domain
DJ48_3128	COG3402	PFAM membrane-flanked domain
DJ48_3136	COG3428	Bacterial PH domain
DJ48_3137	COG3402	PFAM membrane-flanked domain
DJ48_3139	COG1309	transcriptional regulator
DJ48_3142	COG4473	ABC transporter
DJ48_3143	COG1131	(ABC) transporter
DJ48_3144	COG0537	adenosine 5'-monophosphoramidase activity
DJ48_3145	COG4980	gas vesicle protein
DJ48_3149	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DJ48_3150	COG3973	AAA domain
DJ48_3152	COG0477	Major facilitator Superfamily
DJ48_3153	COG0477	Major facilitator Superfamily
DJ48_3161	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DJ48_3163	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DJ48_3164	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
DJ48_3168	COG2267	carboxylic ester hydrolase activity
DJ48_317	COG1399	metal-binding, possibly nucleic acid-binding protein
DJ48_3170	COG0457	Tetratricopeptide repeat
DJ48_3171	COG0346	lactoylglutathione lyase activity
DJ48_3172	COG0346	lactoylglutathione lyase activity
DJ48_3173	COG2814	Major facilitator Superfamily
DJ48_3174	COG1309	transcriptional regulator
DJ48_3178	COG4717	serine-type aminopeptidase activity
DJ48_3179	COG0420	3'-5' exonuclease activity
DJ48_3185	COG0393	Putative heavy-metal-binding
DJ48_3190	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJ48_3190	COG2205	protein histidine kinase activity
DJ48_3190	COG2198	Histidine kinase
DJ48_3190	COG0784	Response regulator, receiver
DJ48_3191	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DJ48_3192	COG2208	phosphoserine phosphatase activity
DJ48_3194	COG1191	sigma factor activity
DJ48_3199	COG3237	CsbD-like
DJ48_32	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DJ48_3209	COG2770	Histidine kinase
DJ48_3209	COG3437	response regulator, receiver
DJ48_321	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DJ48_3214	COG1959	2 iron, 2 sulfur cluster binding
DJ48_3215	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DJ48_3216	COG2376	Dihydroxyacetone kinase
DJ48_3218	COG2376	Dihydroxyacetone kinase
DJ48_3222	COG1183	phosphatidylcholine synthase activity
DJ48_3227	COG3320	Male sterility
DJ48_3227	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DJ48_3237	COG0477	Major facilitator Superfamily
DJ48_324	COG4839	cell division protein FtsL
DJ48_3245	COG0305	Participates in initiation and elongation during chromosome replication
DJ48_3248	COG0789	Transcriptional regulator
DJ48_3248	COG4978	Transcriptional regulator
DJ48_3253	COG3181	Tripartite tricarboxylate transporter family receptor
DJ48_3254	COG4565	transcriptional regulatory protein
DJ48_3255	COG3290	protein histidine kinase activity
DJ48_3256	COG0477	Major facilitator Superfamily
DJ48_326	COG0768	penicillin binding
DJ48_3262	COG4608	Belongs to the ABC transporter superfamily
DJ48_3263	COG0444	Belongs to the ABC transporter superfamily
DJ48_3264	COG0444	Belongs to the ABC transporter superfamily
DJ48_3265	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DJ48_3266	COG0601	transmembrane transport
DJ48_327	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DJ48_3273	COG3938	Belongs to the proline racemase family
DJ48_3277	COG1363	Peptidase, m42
DJ48_3281	COG1024	Enoyl-CoA hydratase
DJ48_3284	COG1696	Membrane protein involved in D-alanine export
DJ48_3287	COG4196	transglutaminase domain protein
DJ48_3288	COG0860	N-Acetylmuramoyl-L-alanine amidase
DJ48_3290	COG2244	polysaccharide biosynthetic process
DJ48_3291	COG0653	protein targeting
DJ48_3295	COG0659	secondary active sulfate transmembrane transporter activity
DJ48_3298	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DJ48_330	COG0772	Belongs to the SEDS family
DJ48_3300	COG5632	N-Acetylmuramoyl-L-alanine amidase
DJ48_3300	COG3409	Peptidoglycan-binding domain 1 protein
DJ48_3303	COG0561	phosphatase activity
DJ48_3306	COG3527	Alpha-acetolactate decarboxylase
DJ48_3307	COG0028	Belongs to the TPP enzyme family
DJ48_331	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DJ48_3313	COG0189	ligase activity
DJ48_3316	COG1126	abc transporter atp-binding protein
DJ48_3317	COG0765	amino acid transport
DJ48_3318	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJ48_3319	COG1132	(ABC) transporter
DJ48_332	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DJ48_3320	COG1132	(ABC) transporter
DJ48_3321	COG1132	(ABC) transporter
DJ48_3322	COG1012	belongs to the aldehyde dehydrogenase family
DJ48_3324	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DJ48_3325	COG0531	amino acid
DJ48_3327	COG0753	catalase activity
DJ48_3327	COG0693	protein deglycase activity
DJ48_3328	COG0693	protein deglycase activity
DJ48_333	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
DJ48_3330	COG2211	Major facilitator Superfamily
DJ48_3331	COG4533	DNA binding
DJ48_3332	COG2249	NAD(P)H dehydrogenase (quinone) activity
DJ48_3334	COG1733	regulation of RNA biosynthetic process
DJ48_3335	COG2814	Major facilitator Superfamily
DJ48_3336	COG1309	transcriptional regulator
DJ48_3337	COG2076	Multidrug Resistance protein
DJ48_3338	COG2076	Multidrug Resistance protein
DJ48_334	COG0849	cell division
DJ48_3340	COG1522	sequence-specific DNA binding
DJ48_3341	COG0697	spore germination
DJ48_3344	COG2259	Doxx family
DJ48_3346	COG1263	PTS System
DJ48_3346	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJ48_3348	COG1737	Transcriptional regulator
DJ48_335	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DJ48_3350	COG0475	glutathione-regulated potassium exporter activity
DJ48_3351	COG0531	amino acid
DJ48_3358	COG0586	Pfam SNARE associated Golgi protein
DJ48_3365	COG3546	catalase activity
DJ48_3366	COG1114	Component of the transport system for branched-chain amino acids
DJ48_3369	COG5522	Integral membrane protein (intg_mem_TP0381)
DJ48_337	COG1191	sigma factor activity
DJ48_3371	COG1136	(ABC) transporter
DJ48_3372	COG0577	efflux transmembrane transporter activity
DJ48_3373	COG1388	LysM domain
DJ48_3373	COG3584	3D domain protein
DJ48_3377	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DJ48_3378	COG1447	Phosphotransferase system cellobiose-specific component IIA
DJ48_3379	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJ48_3379	COG3711	transcriptional antiterminator
DJ48_338	COG1191	sigma factor activity
DJ48_3382	COG1283	sodium-dependent phosphate transmembrane transporter activity
DJ48_3383	COG0604	alcohol dehydrogenase
DJ48_3384	COG1316	TRANSCRIPTIONal
DJ48_3386	COG0730	response to heat
DJ48_3387	COG2210	Belongs to the sulfur carrier protein TusA family
DJ48_3389	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DJ48_339	COG1873	PFAM PRC-barrel domain
DJ48_3391	COG0425	Belongs to the sulfur carrier protein TusA family
DJ48_3392	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJ48_3392	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DJ48_3393	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DJ48_3393	COG0425	Belongs to the sulfur carrier protein TusA family
DJ48_3394	COG1937	Protein conserved in bacteria
DJ48_3395	COG0446	pyridine nucleotide-disulphide oxidoreductase
DJ48_3400	COG2719	SpoVR family
DJ48_3401	COG0778	Nitroreductase
DJ48_3408	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
DJ48_3409	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DJ48_341	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DJ48_3411	COG1609	Transcriptional regulator
DJ48_3412	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJ48_3412	COG1263	PTS System
DJ48_3413	COG1621	beta-fructofuranosidase activity
DJ48_3414	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DJ48_3416	COG1376	ErfK ybiS ycfS ynhG family protein
DJ48_3417	COG1028	Short-chain dehydrogenase reductase Sdr
DJ48_3418	COG2252	PERMEase
DJ48_3421	COG1846	Transcriptional regulator
DJ48_3422	COG2814	Major facilitator Superfamily
DJ48_3423	COG2205	protein histidine kinase activity
DJ48_343	COG0762	integral membrane protein
DJ48_3430	COG0351	phosphomethylpyrimidine kinase
DJ48_3431	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DJ48_3433	COG2104	thiamine diphosphate biosynthetic process
DJ48_3434	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DJ48_3435	COG0352	thiamine-phosphate diphosphorylase activity
DJ48_3436	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DJ48_3437	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DJ48_3438	COG1116	anion transmembrane transporter activity
DJ48_3439	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DJ48_344	COG2302	S4 RNA-binding domain
DJ48_3443	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
DJ48_345	COG3599	regulation of cell shape
DJ48_346	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DJ48_3468	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DJ48_3470	COG0581	inorganic phosphate transmembrane transporter activity
DJ48_3471	COG0573	inorganic phosphate transmembrane transporter activity
DJ48_3472	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DJ48_3473	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DJ48_3473	COG1918	ferrous iron import across plasma membrane
DJ48_3474	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DJ48_3475	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DJ48_3477	COG0531	amino acid
DJ48_3478	COG0697	spore germination
DJ48_3479	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DJ48_3482	COG1473	amidohydrolase
DJ48_3483	COG4990	cell redox homeostasis
DJ48_3484	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DJ48_3485	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DJ48_3488	COG0569	domain protein
DJ48_3488	COG0475	glutathione-regulated potassium exporter activity
DJ48_349	COG0564	pseudouridine synthase activity
DJ48_3493	COG2252	PERMEase
DJ48_3494	COG1113	amino acid transport
DJ48_3498	COG1114	Component of the transport system for branched-chain amino acids
DJ48_3499	COG3104	oligopeptide transport
DJ48_35	COG1760	l-serine dehydratase
DJ48_350	COG0564	pseudouridine synthase activity
DJ48_3502	COG1476	TRANSCRIPTIONal
DJ48_3503	COG3584	3D domain protein
DJ48_3503	COG1388	LysM domain
DJ48_3504	COG0840	transmembrane signaling receptor activity
DJ48_3505	COG1968	undecaprenyl-diphosphatase activity
DJ48_3510	COG3568	Endonuclease Exonuclease Phosphatase
DJ48_3513	COG1063	alcohol dehydrogenase
DJ48_3517	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DJ48_3518	COG1879	ABC-type sugar transport system periplasmic component
DJ48_3519	COG1172	Belongs to the binding-protein-dependent transport system permease family
DJ48_3520	COG1129	ABC transporter
DJ48_3522	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DJ48_3523	COG1609	Transcriptional regulator
DJ48_3524	COG0477	Major facilitator Superfamily
DJ48_3525	COG0477	Major facilitator Superfamily
DJ48_3526	COG1846	Transcriptional regulator
DJ48_3527	COG2271	Major facilitator Superfamily
DJ48_3529	COG4608	Belongs to the ABC transporter superfamily
DJ48_3530	COG0601	transmembrane transport
DJ48_3532	COG0747	negative chemotaxis
DJ48_3535	COG0659	secondary active sulfate transmembrane transporter activity
DJ48_3538	COG5002	protein histidine kinase activity
DJ48_3539	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DJ48_3540	COG2378	regulation of single-species biofilm formation
DJ48_3545	COG0833	amino acid
DJ48_3546	COG0765	amino acid transport
DJ48_3547	COG0765	amino acid transport
DJ48_3548	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJ48_3549	COG1126	abc transporter atp-binding protein
DJ48_355	COG0505	Belongs to the CarA family
DJ48_3550	COG1115	amino acid carrier protein
DJ48_3551	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DJ48_3553	COG0697	spore germination
DJ48_3556	COG0366	Alpha amylase catalytic
DJ48_3557	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJ48_3557	COG1263	PTS System
DJ48_3558	COG2188	Transcriptional regulator
DJ48_3559	COG0531	amino acid
DJ48_3563	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DJ48_3564	COG0714	Associated with various cellular activities
DJ48_3565	COG4548	von Willebrand factor, type A
DJ48_3567	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJ48_3568	COG0156	8-amino-7-oxononanoate synthase activity
DJ48_3569	COG2226	methyltransferase
DJ48_3571	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ48_3572	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ48_3573	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DJ48_3574	COG3104	oligopeptide transport
DJ48_3577	COG1620	l-lactate permease
DJ48_3578	COG1027	Aspartate ammonia-lyase
DJ48_3579	COG1027	Aspartate ammonia-lyase
DJ48_3580	COG1253	flavin adenine dinucleotide binding
DJ48_3581	COG0346	lactoylglutathione lyase activity
DJ48_3582	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DJ48_3583	COG1316	TRANSCRIPTIONal
DJ48_3584	COG2720	vancomycin resistance protein
DJ48_3587	COG3227	Zinc metalloprotease (Elastase)
DJ48_3590	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DJ48_3591	COG2217	Heavy metal translocating P-type atpase
DJ48_3592	COG2217	Heavy metal translocating P-type atpase
DJ48_3593	COG0640	Transcriptional regulator
DJ48_3594	COG0531	amino acid
DJ48_3597	COG2427	Protein of unknown function (DUF1641)
DJ48_3598	COG3383	formate dehydrogenase (NAD+) activity
DJ48_3599	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DJ48_36	COG1760	l-serine dehydratase
DJ48_3600	COG0454	-acetyltransferase
DJ48_3600	COG0456	acetyltransferase
DJ48_3602	COG0745	RESPONSE REGULATOR receiver
DJ48_3603	COG5002	protein histidine kinase activity
DJ48_3605	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DJ48_3608	COG0281	malic enzyme
DJ48_3609	COG3493	citrate carrier protein
DJ48_3610	COG4565	transcriptional regulatory protein
DJ48_3611	COG3290	protein histidine kinase activity
DJ48_3613	COG4990	cell redox homeostasis
DJ48_3615	COG5002	protein histidine kinase activity
DJ48_3616	COG0745	RESPONSE REGULATOR receiver
DJ48_3617	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DJ48_3619	COG0395	ABC-type sugar transport system, permease component
DJ48_3620	COG1175	transmembrane transport
DJ48_3621	COG3842	ATPase activity
DJ48_3622	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
DJ48_3626	COG2851	Citrate transporter
DJ48_3627	COG4565	transcriptional regulatory protein
DJ48_3628	COG3290	protein histidine kinase activity
DJ48_363	COG3069	C4-dicarboxylate transmembrane transporter activity
DJ48_3631	COG2268	Band 7 protein
DJ48_3632	COG1585	Membrane protein implicated in regulation of membrane protease activity
DJ48_3634	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DJ48_3638	COG2766	serine protein kinase
DJ48_3641	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DJ48_3643	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DJ48_3645	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DJ48_3646	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DJ48_366	COG0006	proline dipeptidase activity
DJ48_3671	COG0735	belongs to the Fur family
DJ48_3672	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DJ48_3676	COG4555	ABC transporter
DJ48_3678	COG0067	glutamate synthase
DJ48_3678	COG0070	glutamate synthase
DJ48_3678	COG0069	glutamate synthase activity
DJ48_3679	COG4129	membrane
DJ48_368	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DJ48_3680	COG1132	(ABC) transporter
DJ48_3685	COG1194	a g-specific adenine glycosylase
DJ48_3686	COG1988	membrane-bound metal-dependent
DJ48_369	COG1561	YicC-like family, N-terminal region
DJ48_3692	COG1090	epimerase
DJ48_3693	COG1228	amidohydrolase
DJ48_3697	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DJ48_37	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DJ48_3700	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DJ48_3700	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DJ48_3702	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DJ48_3703	COG0463	Glycosyl transferase, family 2
DJ48_3706	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DJ48_3707	COG1263	PTS System
DJ48_3707	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJ48_3708	COG2066	Belongs to the glutaminase family
DJ48_371	COG0194	GDP metabolic process
DJ48_3713	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DJ48_3714	COG0833	amino acid
DJ48_3716	COG3829	transcription factor binding
DJ48_3718	COG0101	tRNA pseudouridine synthase activity
DJ48_373	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DJ48_374	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DJ48_3744	COG0582	viral genome integration into host DNA
DJ48_375	COG0242	peptide deformylase activity
DJ48_3765	COG1484	DNA-dependent DNA replication
DJ48_377	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DJ48_377	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DJ48_3772	COG1396	sequence-specific DNA binding
DJ48_3776	COG0582	viral genome integration into host DNA
DJ48_3777	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DJ48_3778	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DJ48_3783	COG0535	radical SAM domain protein
DJ48_3785	COG0387	Pfam Sodium calcium exchanger
DJ48_3786	COG3871	stress protein (general stress protein 26)
DJ48_3789	COG0586	Pfam SNARE associated Golgi protein
DJ48_379	COG0631	protein serine/threonine phosphatase activity
DJ48_3793	COG0697	spore germination
DJ48_3794	COG2217	Heavy metal translocating P-type atpase
DJ48_3795	COG1295	ribonuclease BN
DJ48_3797	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DJ48_38	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJ48_380	COG2815	serine threonine protein kinase
DJ48_380	COG0515	serine threonine protein kinase
DJ48_3800	COG3853	Toxic anion resistance protein (TelA)
DJ48_3802	COG0861	Integral membrane protein TerC family
DJ48_3803	COG2310	stress, protein
DJ48_3804	COG2310	stress, protein
DJ48_3805	COG2310	stress, protein
DJ48_3808	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DJ48_381	COG1162	GTPase activity
DJ48_3812	COG2270	Major facilitator Superfamily
DJ48_382	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DJ48_3821	COG0488	(ABC) transporter
DJ48_3822	COG1116	anion transmembrane transporter activity
DJ48_3823	COG3842	ATPase activity
DJ48_3825	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DJ48_3828	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DJ48_383	COG1564	THIamine pyrophosphokinase
DJ48_3834	COG1263	PTS System
DJ48_3834	COG2190	(PTS) system
DJ48_3834	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DJ48_3835	COG0366	Alpha amylase catalytic
DJ48_3836	COG0840	transmembrane signaling receptor activity
DJ48_3837	COG0840	transmembrane signaling receptor activity
DJ48_3839	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DJ48_3840	COG0765	amino acid transport
DJ48_3842	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DJ48_3842	COG0723	plastoquinol--plastocyanin reductase activity
DJ48_3843	COG2814	Major facilitator Superfamily
DJ48_3844	COG3541	Predicted nucleotidyltransferase
DJ48_3848	COG5002	protein histidine kinase activity
DJ48_385	COG1302	Protein conserved in bacteria
DJ48_3854	COG0166	Belongs to the GPI family
DJ48_3857	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DJ48_3858	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ48_3859	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ48_386	COG1461	Dihydroxyacetone kinase
DJ48_3860	COG0235	Class ii aldolase
DJ48_3862	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
DJ48_3863	COG0450	alkyl hydroperoxide reductase
DJ48_3866	COG1473	amidohydrolase
DJ48_387	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DJ48_3872	COG4807	Protein conserved in bacteria
DJ48_3874	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DJ48_3875	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DJ48_3876	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DJ48_3879	COG2309	aminopeptidase activity
DJ48_3880	COG2076	Multidrug Resistance protein
DJ48_3881	COG1012	belongs to the aldehyde dehydrogenase family
DJ48_3883	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DJ48_3884	COG0546	phosphoglycolate phosphatase activity
DJ48_3885	COG1597	lipid kinase activity
DJ48_3889	COG4682	membrane
DJ48_3890	COG1846	Transcriptional regulator
DJ48_3891	COG0003	Pfam Anion-transporting ATPase
DJ48_3894	COG1464	Belongs to the NlpA lipoprotein family
DJ48_3895	COG2011	ABC-type metal ion transport system permease component
DJ48_3896	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DJ48_3897	COG1335	isochorismatase
DJ48_39	COG0300	oxidoreductase activity
DJ48_390	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DJ48_3901	COG4851	CamS sex pheromone cAM373 precursor
DJ48_3903	COG0210	DNA helicase
DJ48_3908	COG0151	Belongs to the GarS family
DJ48_391	COG1028	Short-chain dehydrogenase reductase Sdr
DJ48_3910	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DJ48_3912	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DJ48_3915	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DJ48_3917	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DJ48_3918	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DJ48_3919	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DJ48_3924	COG0745	RESPONSE REGULATOR receiver
DJ48_3925	COG2205	protein histidine kinase activity
DJ48_3928	COG1968	undecaprenyl-diphosphatase activity
DJ48_3933	COG1215	transferase activity, transferring glycosyl groups
DJ48_3938	COG2226	methyltransferase
DJ48_394	COG1196	nuclear chromosome segregation
DJ48_3945	COG5002	protein histidine kinase activity
DJ48_3947	COG2252	PERMEase
DJ48_395	COG0552	protein localization to endoplasmic reticulum
DJ48_3951	COG1266	CAAX protease self-immunity
DJ48_3954	COG0488	(ABC) transporter
DJ48_3955	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DJ48_3956	COG0456	acetyltransferase
DJ48_3957	COG1214	PFAM Peptidase M22, glycoprotease
DJ48_3958	COG0802	atpase or kinase
DJ48_397	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DJ48_3977	COG2183	response to ionizing radiation
DJ48_3978	COG2337	Toxic component of a toxin-antitoxin (TA) module
DJ48_3979	COG0864	Transcriptional regulator
DJ48_3980	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DJ48_3981	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
DJ48_3983	COG4294	response to UV
DJ48_3984	COG0705	Rhomboid family
DJ48_3984	COG0457	Tetratricopeptide repeat
DJ48_3986	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DJ48_3988	COG2814	Major facilitator Superfamily
DJ48_399	COG1837	Belongs to the UPF0109 family
DJ48_3990	COG0179	Fumarylacetoacetate (FAA) hydrolase
DJ48_3991	COG3185	4-Hydroxyphenylpyruvate dioxygenase
DJ48_3997	COG0561	phosphatase activity
DJ48_3998	COG4608	Belongs to the ABC transporter superfamily
DJ48_3999	COG0444	Belongs to the ABC transporter superfamily
DJ48_4	COG0497	DNA recombination
DJ48_4001	COG0601	transmembrane transport
DJ48_4002	COG0747	negative chemotaxis
DJ48_4005	COG0488	(ABC) transporter
DJ48_4009	COG5298	Protein conserved in bacteria
DJ48_4010	COG0084	hydrolase, TatD family'
DJ48_4013	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DJ48_4015	COG1609	Transcriptional regulator
DJ48_4017	COG0204	Acyl-transferase
DJ48_4020	COG0697	spore germination
DJ48_4024	COG1910	domain protein
DJ48_4025	COG0725	ABC transporter, periplasmic molybdate-binding protein
DJ48_4026	COG4149	molybdate abc transporter
DJ48_4029	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DJ48_4030	COG0656	L-ascorbic acid biosynthetic process
DJ48_4031	COG4166	transmembrane transport
DJ48_4032	COG4166	transmembrane transport
DJ48_4035	COG2207	Transcriptional regulator
DJ48_4037	COG4166	transmembrane transport
DJ48_4038	COG4608	Belongs to the ABC transporter superfamily
DJ48_4039	COG0444	Belongs to the ABC transporter superfamily
DJ48_4040	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DJ48_4041	COG0601	transmembrane transport
DJ48_4044	COG2814	Major facilitator Superfamily
DJ48_4046	COG2271	Major facilitator Superfamily
DJ48_4047	COG0277	FAD linked oxidase domain protein
DJ48_4050	COG1464	Belongs to the NlpA lipoprotein family
DJ48_4051	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DJ48_4052	COG2011	ABC-type metal ion transport system permease component
DJ48_4053	COG1028	Short-chain dehydrogenase reductase Sdr
DJ48_4059	COG0823	Involved in the tonB-independent uptake of proteins
DJ48_4059	COG1506	peptidase
DJ48_4059	COG4946	Tricorn protease homolog
DJ48_4060	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DJ48_4064	COG0596	Alpha beta hydrolase
DJ48_4065	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DJ48_4067	COG4856	YbbR-like protein
DJ48_4068	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DJ48_407	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DJ48_408	COG0758	DNA mediated transformation
DJ48_4086	COG0726	polysaccharide deacetylase
DJ48_4087	COG2194	sulfuric ester hydrolase activity
DJ48_4089	COG0489	protein tyrosine kinase activity
DJ48_409	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DJ48_4090	COG0860	N-Acetylmuramoyl-L-alanine amidase
DJ48_4094	COG0101	tRNA pseudouridine synthase activity
DJ48_4095	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DJ48_4096	COG1122	ATPase activity
DJ48_4102	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DJ48_4104	COG0024	Methionine aminopeptidase
DJ48_4106	COG0201	protein transport
DJ48_411	COG4974	Belongs to the 'phage' integrase family
DJ48_4111	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DJ48_4132	COG1358	cellular component organization or biogenesis
DJ48_4133	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DJ48_4135	COG2813	Specifically methylates the guanine in position
DJ48_4140	COG0250	Participates in transcription elongation, termination and antitermination
DJ48_4141	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DJ48_4143	COG3688	RNA-binding protein containing a PIN domain
DJ48_4144	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DJ48_4147	COG1045	serine acetyltransferase
DJ48_4151	COG4956	integral membrane protein (PIN domain superfamily)
DJ48_4153	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DJ48_4154	COG0542	response to heat
DJ48_4156	COG3880	PFAM UvrB UvrC protein
DJ48_4163	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DJ48_4164	COG1396	sequence-specific DNA binding
DJ48_4165	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DJ48_4166	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DJ48_4167	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DJ48_4168	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DJ48_4169	COG0512	Glutamine amidotransferase of anthranilate synthase
DJ48_417	COG0528	UMP kinase activity
DJ48_4170	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DJ48_4171	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DJ48_4174	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DJ48_4176	COG0037	tRNA processing
DJ48_4177	COG2208	phosphoserine phosphatase activity
DJ48_4180	COG1098	S1 RNA binding domain
DJ48_4184	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DJ48_4185	COG3956	TIGRFAM MazG family protein
DJ48_4186	COG2244	polysaccharide biosynthetic process
DJ48_4187	COG2002	toxin-antitoxin pair type II binding
DJ48_4188	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DJ48_4190	COG0193	aminoacyl-tRNA hydrolase activity
DJ48_4191	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DJ48_4194	COG0251	oxidation-reduction process
DJ48_4195	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DJ48_4198	COG4466	Protein conserved in bacteria
DJ48_42	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
DJ48_420	COG4589	Belongs to the CDS family
DJ48_4201	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DJ48_4202	COG0084	hydrolase, TatD family'
DJ48_4203	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DJ48_4203	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DJ48_4204	COG2002	toxin-antitoxin pair type II binding
DJ48_4205	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DJ48_4207	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
DJ48_4209	COG1774	PSP1 C-terminal conserved region
DJ48_421	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
DJ48_4210	COG0470	DNA polymerase III
DJ48_4212	COG1982	Orn Lys Arg decarboxylase major
DJ48_422	COG0750	zinc metalloprotease
DJ48_4223	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DJ48_4224	COG0590	tRNA wobble adenosine to inosine editing
DJ48_4225	COG1335	isochorismatase
DJ48_4226	COG1428	Deoxynucleoside kinase
DJ48_4227	COG1428	Deoxynucleoside kinase
DJ48_4233	COG1686	Belongs to the peptidase S11 family
DJ48_4234	COG0517	IMP dehydrogenase activity
DJ48_4234	COG0516	GMP reductase activity
DJ48_4242	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DJ48_4243	COG0187	DNA topoisomerase II activity
DJ48_4245	COG2501	S4 domain
DJ48_4246	COG0592	DNA-directed DNA polymerase activity
DJ48_4250	COG0706	membrane insertase activity
DJ48_4251	COG1847	R3H domain protein
DJ48_4252	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DJ48_4256	COG1192	Involved in chromosome partitioning
DJ48_4257	COG1475	DNA binding
DJ48_4259	COG0668	transmembrane transport
DJ48_426	COG0195	Participates in both transcription termination and antitermination
DJ48_4260	COG4481	Protein conserved in bacteria
DJ48_4261	COG0012	GTP binding
DJ48_4263	COG0629	single-stranded DNA binding
DJ48_4265	COG4241	membrane
DJ48_4266	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
DJ48_4268	COG0305	Participates in initiation and elongation during chromosome replication
DJ48_427	COG2740	Nucleic-acid-binding protein implicated in transcription termination
DJ48_4274	COG0745	RESPONSE REGULATOR receiver
DJ48_4275	COG5002	protein histidine kinase activity
DJ48_4276	COG4863	YycH protein
DJ48_4277	COG4853	Protein conserved in bacteria
DJ48_4278	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DJ48_4279	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DJ48_428	COG1358	cellular component organization or biogenesis
DJ48_4283	COG1164	Oligoendopeptidase f
DJ48_4288	COG1272	protein, Hemolysin III
DJ48_4289	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DJ48_4293	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DJ48_4294	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
DJ48_4295	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DJ48_4296	COG2814	Major facilitator Superfamily
DJ48_4297	COG3275	phosphorelay sensor kinase activity
DJ48_4298	COG3279	Response regulator of the LytR AlgR family
DJ48_430	COG1550	Protein conserved in bacteria
DJ48_4301	COG0628	permease
DJ48_4302	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DJ48_4302	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DJ48_4303	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DJ48_4304	COG1309	transcriptional regulator
DJ48_4305	COG0463	Glycosyl transferase, family 2
DJ48_4310	COG0488	(ABC) transporter
DJ48_4313	COG1607	acyl-coa hydrolase
DJ48_4315	COG0840	transmembrane signaling receptor activity
DJ48_432	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DJ48_4320	COG0477	Major facilitator Superfamily
DJ48_4321	COG3279	Response regulator of the LytR AlgR family
DJ48_4322	COG1966	Carbon starvation protein
DJ48_4323	COG2879	small protein
DJ48_4324	COG3706	GGDEF domain
DJ48_4325	COG0351	phosphomethylpyrimidine kinase
DJ48_4326	COG2203	Gaf domain
DJ48_4326	COG4585	Histidine kinase
DJ48_4327	COG4585	Histidine kinase
DJ48_4327	COG2203	Gaf domain
DJ48_4328	COG2197	response regulator
DJ48_433	COG0196	riboflavin kinase activity
DJ48_4330	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DJ48_4331	COG1011	Hydrolase
DJ48_4335	COG0460	homoserine dehydrogenase
DJ48_4337	COG1609	Transcriptional regulator
DJ48_4338	COG2755	lipolytic protein G-D-S-L family
DJ48_4339	COG1131	(ABC) transporter
DJ48_4340	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
DJ48_4342	COG2814	Major facilitator Superfamily
DJ48_4343	COG0561	phosphatase activity
DJ48_4344	COG2233	PERMEase
DJ48_4345	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DJ48_4347	COG2363	Small membrane protein
DJ48_4349	COG3773	Cell wall hydrolase
DJ48_4352	COG0280	phosphate acetyltransferase
DJ48_4353	COG0095	Lipoate-protein ligase
DJ48_4357	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ48_4358	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ48_4359	COG1120	ATPase activity
DJ48_436	COG0726	polysaccharide deacetylase
DJ48_4360	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DJ48_4361	COG1078	dGTPase activity
DJ48_4363	COG1994	Peptidase M50
DJ48_4365	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DJ48_4366	COG0584	glycerophosphoryl diester phosphodiesterase
DJ48_4367	COG0789	Transcriptional regulator
DJ48_4368	COG2814	Major facilitator Superfamily
DJ48_4369	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
DJ48_437	COG0612	Peptidase, M16
DJ48_4370	COG0010	Belongs to the arginase family
DJ48_4373	COG1619	proteins homologs of microcin C7 resistance protein MccF
DJ48_4374	COG4506	Protein conserved in bacteria
DJ48_4376	COG1595	DNA-templated transcription, initiation
DJ48_438	COG1873	PFAM PRC-barrel domain
DJ48_4380	COG2234	aminopeptidase activity
DJ48_4383	COG0024	Methionine aminopeptidase
DJ48_4384	COG1131	(ABC) transporter
DJ48_4385	COG0842	Transport permease protein
DJ48_4386	COG4585	Histidine kinase
DJ48_4387	COG2197	response regulator
DJ48_439	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DJ48_4391	COG5001	Diguanylate cyclase
DJ48_4391	COG3300	MHYT domain
DJ48_4393	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DJ48_4394	COG2181	nitrate reductase activity
DJ48_4394	COG0247	lactate metabolic process
DJ48_4395	COG0183	Belongs to the thiolase family
DJ48_4396	COG1250	3-hydroxyacyl-CoA dehydrogenase
DJ48_4397	COG1960	acyl-CoA dehydrogenase activity
DJ48_4398	COG1960	acyl-CoA dehydrogenase activity
DJ48_44	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DJ48_440	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DJ48_4402	COG4821	SIS domain
DJ48_4406	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DJ48_4407	COG1494	fructose-1,6-bisphosphatase
DJ48_4408	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DJ48_441	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DJ48_4411	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DJ48_4412	COG2890	protein-(glutamine-N5) methyltransferase activity
DJ48_4415	COG0009	L-threonylcarbamoyladenylate synthase
DJ48_4418	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DJ48_4419	COG2259	Doxx family
DJ48_442	COG0527	aspartate kinase activity
DJ48_4420	COG2190	(PTS) system
DJ48_4422	COG0698	ribose 5-phosphate isomerase
DJ48_4428	COG0356	it plays a direct role in the translocation of protons across the membrane
DJ48_4438	COG5001	Diguanylate cyclase
DJ48_4438	COG3300	MHYT domain
DJ48_4439	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DJ48_444	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DJ48_4441	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DJ48_4442	COG0649	NAD binding
DJ48_4445	COG0839	Belongs to the complex I subunit 6 family
DJ48_4447	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DJ48_4448	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DJ48_4449	COG1007	ATP synthesis coupled electron transport
DJ48_445	COG0740	serine-type endopeptidase activity
DJ48_4450	COG4836	Membrane
DJ48_4452	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DJ48_4453	COG2385	sporulation resulting in formation of a cellular spore
DJ48_4454	COG3279	Response regulator of the LytR AlgR family
DJ48_4457	COG0739	heme binding
DJ48_4459	COG1609	Transcriptional regulator
DJ48_4467	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DJ48_4468	COG1682	transport, permease protein
DJ48_4469	COG1134	teichoic acid transport
DJ48_447	COG1674	ftsk spoiiie
DJ48_4470	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DJ48_4474	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DJ48_4475	COG0745	RESPONSE REGULATOR receiver
DJ48_4476	COG5002	protein histidine kinase activity
DJ48_448	COG2188	Transcriptional regulator
DJ48_4483	COG1136	(ABC) transporter
DJ48_4484	COG0577	efflux transmembrane transporter activity
DJ48_4486	COG1191	sigma factor activity
DJ48_4492	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DJ48_4493	COG4715	Zinc finger, swim domain protein
DJ48_4498	COG3584	3D domain protein
DJ48_4498	COG1388	LysM domain
DJ48_4499	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DJ48_4501	COG1215	transferase activity, transferring glycosyl groups
DJ48_4503	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DJ48_4504	COG1388	LysM domain
DJ48_4504	COG0791	NLP P60 protein
DJ48_4507	COG1368	sulfuric ester hydrolase activity
DJ48_4510	COG2389	metal-binding protein
DJ48_4512	COG1620	l-lactate permease
DJ48_4514	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DJ48_4515	COG1294	oxidase, subunit
DJ48_4516	COG1271	oxidase subunit
DJ48_4520	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
DJ48_4521	COG0583	DNA-binding transcription factor activity
DJ48_4522	COG1511	domain protein
DJ48_4523	COG0346	lactoylglutathione lyase activity
DJ48_4525	COG1301	dicarboxylic acid transport
DJ48_4526	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DJ48_4528	COG1447	Phosphotransferase system cellobiose-specific component IIA
DJ48_4529	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
DJ48_4530	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
DJ48_4532	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DJ48_4533	COG1447	Phosphotransferase system cellobiose-specific component IIA
DJ48_4534	COG1486	melibiose metabolic process
DJ48_4535	COG3394	polysaccharide catabolic process
DJ48_4538	COG3933	PFAM sigma-54 factor interaction domain-containing protein
DJ48_4538	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DJ48_454	COG0612	Peptidase, M16
DJ48_4540	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DJ48_4541	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DJ48_4542	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DJ48_4543	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DJ48_4544	COG1316	TRANSCRIPTIONal
DJ48_4545	COG1739	Uncharacterized protein family UPF0029
DJ48_4546	COG1307	EDD domain protein, DegV family
DJ48_4547	COG1733	regulation of RNA biosynthetic process
DJ48_4548	COG0791	NLP P60 protein
DJ48_4548	COG1388	LysM domain
DJ48_4549	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
DJ48_455	COG0612	Peptidase, M16
DJ48_4550	COG1040	competence protein
DJ48_4551	COG1278	Cold shock
DJ48_4552	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DJ48_4553	COG0653	protein targeting
DJ48_4554	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DJ48_4556	COG2884	Cell division ATP-binding protein ftsE
DJ48_4557	COG2177	Part of the ABC transporter FtsEX involved in
DJ48_4558	COG3409	Peptidoglycan-binding domain 1 protein
DJ48_4558	COG0793	Belongs to the peptidase S41A family
DJ48_4559	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DJ48_456	COG0300	oxidoreductase activity
DJ48_4560	COG1132	(ABC) transporter
DJ48_4563	COG0655	NAD(P)H dehydrogenase (quinone) activity
DJ48_4565	COG0583	DNA-binding transcription factor activity
DJ48_4566	COG2855	membrane
DJ48_4571	COG0789	Transcriptional regulator
DJ48_4575	COG0556	nucleotide-excision repair
DJ48_4576	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DJ48_4577	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DJ48_4579	COG1950	PFAM Membrane protein of
DJ48_4583	COG0110	maltose O-acetyltransferase activity
DJ48_4584	COG0457	Tetratricopeptide repeat
DJ48_4585	COG0492	ferredoxin-NADP+ reductase activity
DJ48_4587	COG1051	belongs to the nudix hydrolase family
DJ48_4589	COG0391	Required for morphogenesis under gluconeogenic growth conditions
DJ48_459	COG1426	Protein conserved in bacteria
DJ48_4591	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJ48_4593	COG2323	membrane
DJ48_4596	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DJ48_460	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DJ48_4601	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
DJ48_4604	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DJ48_4606	COG0149	triose-phosphate isomerase activity
DJ48_4609	COG4974	Belongs to the 'phage' integrase family
DJ48_4613	COG4695	Portal protein
DJ48_4632	COG1346	cytolysis
DJ48_4633	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DJ48_4634	COG1647	Serine aminopeptidase, S33
DJ48_4635	COG0557	exoribonuclease II activity
DJ48_4644	COG3223	Belongs to the PsiE family
DJ48_4645	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DJ48_4648	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DJ48_4649	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DJ48_465	COG1692	metallophosphoesterase
DJ48_4651	COG3290	protein histidine kinase activity
DJ48_4651	COG0840	transmembrane signaling receptor activity
DJ48_4653	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DJ48_4654	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DJ48_4655	COG1252	NADH dehydrogenase
DJ48_4657	COG1733	regulation of RNA biosynthetic process
DJ48_4658	COG2814	Major facilitator Superfamily
DJ48_4659	COG0656	L-ascorbic acid biosynthetic process
DJ48_466	COG2359	stage V sporulation protein S
DJ48_4663	COG2910	NAD(P)H-binding
DJ48_4664	COG1115	amino acid carrier protein
DJ48_4665	COG1115	amino acid carrier protein
DJ48_4666	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DJ48_4667	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DJ48_4669	COG2311	Membrane
DJ48_4672	COG1611	Belongs to the LOG family
DJ48_4675	COG0783	Belongs to the Dps family
DJ48_4676	COG1115	amino acid carrier protein
DJ48_4677	COG0490	domain, Protein
DJ48_4678	COG0475	glutathione-regulated potassium exporter activity
DJ48_468	COG0674	pyruvate-flavodoxin oxidoreductase activity
DJ48_468	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DJ48_4681	COG1741	Belongs to the pirin family
DJ48_4682	COG3227	Zinc metalloprotease (Elastase)
DJ48_4683	COG2151	metal-sulfur cluster biosynthetic enzyme
DJ48_4686	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DJ48_4688	COG5002	protein histidine kinase activity
DJ48_4689	COG0745	RESPONSE REGULATOR receiver
DJ48_469	COG1013	pyruvate-flavodoxin oxidoreductase activity
DJ48_4690	COG1376	ErfK ybiS ycfS ynhG family protein
DJ48_4692	COG0586	Pfam SNARE associated Golgi protein
DJ48_4699	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DJ48_470	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DJ48_4701	COG0706	membrane insertase activity
DJ48_4703	COG0531	amino acid
DJ48_4704	COG2814	Major facilitator Superfamily
DJ48_4708	COG0840	transmembrane signaling receptor activity
DJ48_4709	COG0011	TIGRFAM Protein of
DJ48_471	COG4550	Control of competence regulator ComK, YlbF/YmcA
DJ48_4712	COG1686	Belongs to the peptidase S11 family
DJ48_4714	COG1024	Enoyl-CoA hydratase
DJ48_4714	COG1250	3-hydroxyacyl-CoA dehydrogenase
DJ48_4715	COG0183	Belongs to the thiolase family
DJ48_4716	COG1960	acyl-CoA dehydrogenase activity
DJ48_4717	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJ48_4718	COG1309	transcriptional regulator
DJ48_4723	COG0039	L-malate dehydrogenase activity
DJ48_4732	COG1393	Belongs to the ArsC family
DJ48_4734	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DJ48_4735	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DJ48_4737	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DJ48_4738	COG2011	ABC-type metal ion transport system permease component
DJ48_4739	COG1464	Belongs to the NlpA lipoprotein family
DJ48_4740	COG1464	Belongs to the NlpA lipoprotein family
DJ48_4741	COG0396	ATPase activity
DJ48_4742	COG0719	Fe-S assembly protein
DJ48_4743	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DJ48_4744	COG0822	iron-sulfur transferase activity
DJ48_4745	COG0719	Fe-S assembly protein
DJ48_4747	COG1695	Transcriptional regulator
DJ48_4748	COG0737	Belongs to the 5'-nucleotidase family
DJ48_4749	COG3377	Domain of unknown function (DUF1805)
DJ48_4751	COG0739	heme binding
DJ48_4756	COG4377	Putative membrane peptidase family (DUF2324)
DJ48_4757	COG0789	Transcriptional regulator
DJ48_4759	COG4470	Protein conserved in bacteria
DJ48_4762	COG1494	fructose-1,6-bisphosphatase
DJ48_4763	COG2445	Protein of unknown function DUF86
DJ48_4765	COG0647	UMP catabolic process
DJ48_4766	COG2249	NAD(P)H dehydrogenase (quinone) activity
DJ48_4768	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DJ48_4769	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DJ48_4771	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
DJ48_4772	COG4837	Protein of unknown function (DUF1462)
DJ48_4780	COG2824	Alkylphosphonate utilization operon protein PhnA
DJ48_4781	COG0390	transport system, permease component
DJ48_4782	COG2274	protein secretion by the type I secretion system
DJ48_4783	COG1252	NADH dehydrogenase
DJ48_4786	COG0316	Belongs to the HesB IscA family
DJ48_4789	COG1683	Conserved Protein
DJ48_4793	COG3708	Transcriptional regulator
DJ48_4796	COG1252	NADH dehydrogenase
DJ48_4799	COG3584	3D domain protein
DJ48_48	COG1522	sequence-specific DNA binding
DJ48_480	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
DJ48_4802	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DJ48_4803	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DJ48_4805	COG1268	BioY protein
DJ48_4807	COG2050	protein possibly involved in aromatic compounds catabolism
DJ48_4808	COG0423	glycine-tRNA ligase activity
DJ48_4811	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DJ48_4812	COG5018	Exonuclease
DJ48_4816	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DJ48_4818	COG2267	carboxylic ester hydrolase activity
DJ48_4819	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DJ48_482	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DJ48_4820	COG1522	sequence-specific DNA binding
DJ48_4821	COG0436	Aminotransferase
DJ48_4822	COG1098	S1 RNA binding domain
DJ48_4823	COG2155	Conserved Protein
DJ48_4824	COG0166	Belongs to the GPI family
DJ48_4825	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DJ48_4827	COG1285	pathogenesis
DJ48_483	COG1368	sulfuric ester hydrolase activity
DJ48_4835	COG0544	peptidyl-prolyl cis-trans isomerase activity
DJ48_484	COG0562	UDP-galactopyranose mutase
DJ48_485	COG3773	Cell wall hydrolase
DJ48_4854	COG0039	L-malate dehydrogenase activity
DJ48_4856	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DJ48_4857	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DJ48_4858	COG0297	glycogen (starch) synthase activity
DJ48_4859	COG0058	SHG alpha-glucan phosphorylase activity
DJ48_486	COG1404	Belongs to the peptidase S8 family
DJ48_4863	COG1278	Cold shock
DJ48_4864	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DJ48_4865	COG1575	Belongs to the MenA family. Type 1 subfamily
DJ48_4866	COG1169	isochorismate synthase
DJ48_4867	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
DJ48_4868	COG0596	Alpha beta hydrolase
DJ48_4869	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
DJ48_4871	COG4948	Mandelate Racemase Muconate Lactonizing
DJ48_4878	COG3964	amidohydrolase
DJ48_488	COG0823	Involved in the tonB-independent uptake of proteins
DJ48_4885	COG0577	efflux transmembrane transporter activity
DJ48_4886	COG1136	(ABC) transporter
DJ48_4887	COG0577	efflux transmembrane transporter activity
DJ48_4888	COG0577	efflux transmembrane transporter activity
DJ48_4889	COG2205	protein histidine kinase activity
DJ48_4890	COG0745	RESPONSE REGULATOR receiver
DJ48_4891	COG2207	Transcriptional regulator
DJ48_4891	COG3708	Transcriptional regulator
DJ48_4892	COG1136	(ABC) transporter
DJ48_4893	COG0577	efflux transmembrane transporter activity
DJ48_4895	COG0586	Pfam SNARE associated Golgi protein
DJ48_490	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DJ48_4902	COG1597	lipid kinase activity
DJ48_4908	COG0745	RESPONSE REGULATOR receiver
DJ48_4909	COG5002	protein histidine kinase activity
DJ48_491	COG0596	Alpha beta hydrolase
DJ48_491	COG0508	dehydrogenase complex catalyzes the overall conversion of
DJ48_4916	COG1842	Phage shock protein A
DJ48_492	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DJ48_4921	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DJ48_4925	COG1294	oxidase, subunit
DJ48_4926	COG1271	oxidase subunit
DJ48_4928	COG0288	reversible hydration of carbon dioxide
DJ48_493	COG1380	Effector of murein hydrolase LrgA
DJ48_4933	COG0494	nUDIX hydrolase
DJ48_4935	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
DJ48_4939	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DJ48_494	COG1346	cytolysis
DJ48_4940	COG1116	anion transmembrane transporter activity
DJ48_4941	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DJ48_4944	COG1368	sulfuric ester hydrolase activity
DJ48_4945	COG2267	carboxylic ester hydrolase activity
DJ48_4946	COG4191	Histidine kinase
DJ48_4947	COG5002	protein histidine kinase activity
DJ48_4948	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DJ48_4958	COG0521	Mo-molybdopterin cofactor biosynthetic process
DJ48_4960	COG0438	transferase activity, transferring glycosyl groups
DJ48_4961	COG0671	phosphoesterase, PA-phosphatase related
DJ48_4962	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DJ48_4963	COG2267	carboxylic ester hydrolase activity
DJ48_4967	COG1794	racemase activity, acting on amino acids and derivatives
DJ48_4969	COG1131	(ABC) transporter
DJ48_497	COG3300	MHYT domain
DJ48_497	COG5001	Diguanylate cyclase
DJ48_4970	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DJ48_4971	COG1242	4 iron, 4 sulfur cluster binding
DJ48_4975	COG1136	(ABC) transporter
DJ48_4977	COG0582	viral genome integration into host DNA
DJ48_4978	COG0490	domain, Protein
DJ48_4979	COG0475	glutathione-regulated potassium exporter activity
DJ48_498	COG0346	lactoylglutathione lyase activity
DJ48_4980	COG2814	Major facilitator Superfamily
DJ48_4988	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DJ48_499	COG2267	carboxylic ester hydrolase activity
DJ48_4990	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DJ48_4994	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DJ48_4995	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DJ48_4997	COG0303	'Molybdopterin
DJ48_4998	COG1763	Mo-molybdopterin cofactor biosynthetic process
DJ48_4999	COG0314	molybdopterin synthase activity
DJ48_5	COG0750	zinc metalloprotease
DJ48_50	COG0737	Belongs to the 5'-nucleotidase family
DJ48_5004	COG1329	Transcriptional regulator
DJ48_5008	COG3832	glyoxalase III activity
DJ48_5011	COG2814	Major facilitator Superfamily
DJ48_5013	COG2081	HI0933 family
DJ48_5014	COG2244	polysaccharide biosynthetic process
DJ48_5015	COG1187	pseudouridine synthase activity
DJ48_5016	COG1349	DNA-binding transcription factor activity
DJ48_5017	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DJ48_5019	COG1523	belongs to the glycosyl hydrolase 13 family
DJ48_502	COG2364	Membrane
DJ48_5020	COG0510	thiamine kinase activity
DJ48_5023	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJ48_5025	COG1363	Peptidase, m42
DJ48_5026	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
DJ48_5027	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DJ48_5028	COG4848	Belongs to the UPF0354 family
DJ48_5029	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DJ48_5031	COG1674	ftsk spoiiie
DJ48_5034	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DJ48_5038	COG2309	aminopeptidase activity
DJ48_504	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DJ48_5040	COG3118	belongs to the thioredoxin family
DJ48_5041	COG4851	CamS sex pheromone cAM373 precursor
DJ48_5042	COG1609	Transcriptional regulator
DJ48_505	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DJ48_5050	COG0666	response to abiotic stimulus
DJ48_5052	COG0745	RESPONSE REGULATOR receiver
DJ48_5054	COG0123	including yeast histone deacetylase and acetoin utilization protein
DJ48_5055	COG0517	IMP dehydrogenase activity
DJ48_5056	COG0454	-acetyltransferase
DJ48_5057	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DJ48_5059	COG1595	DNA-templated transcription, initiation
DJ48_506	COG2169	Transcriptional regulator
DJ48_5061	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DJ48_5065	COG0626	cystathionine gamma-synthase activity
DJ48_5066	COG1956	GAF domain-containing protein
DJ48_5067	COG1309	transcriptional regulator
DJ48_5068	COG0697	spore germination
DJ48_5069	COG0583	DNA-binding transcription factor activity
DJ48_507	COG0708	Exodeoxyribonuclease III
DJ48_5071	COG1104	cysteine desulfurase activity
DJ48_5074	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DJ48_5076	COG1574	metal-dependent hydrolase with the TIM-barrel fold
DJ48_5077	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DJ48_5079	COG3874	Sporulation protein YtfJ
DJ48_5080	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DJ48_5081	COG0827	DNA restriction-modification system
DJ48_5082	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DJ48_5086	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DJ48_509	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DJ48_5095	COG0589	response to stress
DJ48_5096	COG1028	Short-chain dehydrogenase reductase Sdr
DJ48_5099	COG1476	TRANSCRIPTIONal
DJ48_510	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ48_5101	COG0662	Cupin 2, conserved barrel domain protein
DJ48_5102	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DJ48_5109	COG0006	proline dipeptidase activity
DJ48_511	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ48_5112	COG4109	DRTGG domain
DJ48_5116	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
DJ48_5119	COG0587	DNA-directed DNA polymerase activity
DJ48_512	COG1120	ATPase activity
DJ48_5120	COG0281	malic enzyme
DJ48_5121	COG1725	Transcriptional regulator
DJ48_5126	COG3030	protein affecting phage T7 exclusion by the F plasmid
DJ48_5127	COG0628	permease
DJ48_5129	COG0372	Belongs to the citrate synthase family
DJ48_513	COG2819	hydrolase of the alpha beta superfamily
DJ48_5130	COG0538	isocitrate dehydrogenase activity
DJ48_5134	COG0745	RESPONSE REGULATOR receiver
DJ48_5135	COG5002	protein histidine kinase activity
DJ48_5136	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DJ48_5136	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DJ48_5137	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
DJ48_5138	COG1971	Probably functions as a manganese efflux pump
DJ48_5139	COG0237	dephospho-CoA kinase activity
DJ48_5140	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DJ48_5141	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
DJ48_5143	COG3611	Membrane attachment protein
DJ48_5144	COG1484	DNA-dependent DNA replication
DJ48_5146	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DJ48_5147	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DJ48_515	COG1937	Protein conserved in bacteria
DJ48_5151	COG1363	Peptidase, m42
DJ48_5152	COG1309	transcriptional regulator
DJ48_5153	COG1566	PFAM secretion protein HlyD family protein
DJ48_5154	COG2814	Major facilitator Superfamily
DJ48_5159	COG1418	mRNA catabolic process
DJ48_516	COG2608	mercury ion transmembrane transporter activity
DJ48_5161	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DJ48_5163	COG0072	phenylalanine-tRNA ligase activity
DJ48_5163	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DJ48_5164	COG0017	Asparaginyl-tRNA synthetase
DJ48_517	COG2217	Heavy metal translocating P-type atpase
DJ48_5170	COG1286	toxin biosynthetic process
DJ48_5171	COG1796	DNA polymerase
DJ48_5171	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DJ48_5174	COG1187	pseudouridine synthase activity
DJ48_5175	COG1114	Component of the transport system for branched-chain amino acids
DJ48_5176	COG5386	Cell surface protein
DJ48_5178	COG5386	Cell surface protein
DJ48_5182	COG1120	ATPase activity
DJ48_5183	COG4509	Sortase family
DJ48_5186	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DJ48_5187	COG4895	conserved protein (DUF2196)
DJ48_5189	COG0745	RESPONSE REGULATOR receiver
DJ48_519	COG2116	formate transmembrane transporter activity
DJ48_5190	COG2205	protein histidine kinase activity
DJ48_5191	COG1131	(ABC) transporter
DJ48_5197	COG2318	DinB family
DJ48_520	COG1408	metallophosphoesterase
DJ48_5201	COG0318	PFAM AMP-dependent synthetase and ligase
DJ48_5202	COG1309	transcriptional regulator
DJ48_5203	COG1024	Enoyl-CoA hydratase
DJ48_5204	COG2086	electron transfer activity
DJ48_5205	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
DJ48_5206	COG3118	belongs to the thioredoxin family
DJ48_5208	COG1719	4-vinyl reductase, 4VR
DJ48_5209	COG2009	succinate dehydrogenase
DJ48_5210	COG1053	succinate dehydrogenase
DJ48_5211	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DJ48_5212	COG0824	Thioesterase
DJ48_5213	COG1876	peptidase activity
DJ48_5214	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DJ48_5215	COG1360	Flagellar Motor Protein
DJ48_5216	COG1360	Flagellar Motor Protein
DJ48_5217	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
DJ48_5218	COG4152	abc transporter atp-binding protein
DJ48_5219	COG1668	transmembrane transport
DJ48_5220	COG1959	2 iron, 2 sulfur cluster binding
DJ48_5222	COG0697	spore germination
DJ48_5223	COG1396	sequence-specific DNA binding
DJ48_5224	COG1983	PspC domain protein
DJ48_5226	COG3279	Response regulator of the LytR AlgR family
DJ48_5227	COG3275	phosphorelay sensor kinase activity
DJ48_5228	COG4608	Belongs to the ABC transporter superfamily
DJ48_5229	COG0444	Belongs to the ABC transporter superfamily
DJ48_523	COG1113	amino acid transport
DJ48_5233	COG0402	S-adenosylhomocysteine deaminase activity
DJ48_5234	COG0402	S-adenosylhomocysteine deaminase activity
DJ48_5236	COG2233	PERMEase
DJ48_5237	COG2197	response regulator
DJ48_5240	COG1309	transcriptional regulator
DJ48_5244	COG5401	PFAM Sporulation and spore germination
DJ48_5246	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DJ48_5247	COG0622	Phosphoesterase
DJ48_5257	COG1067	ATP-dependent peptidase activity
DJ48_5257	COG0470	DNA polymerase III
DJ48_526	COG2322	membrane
DJ48_5260	COG1764	response to oxidative stress
DJ48_5261	COG1846	Transcriptional regulator
DJ48_5263	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DJ48_5265	COG1587	Uroporphyrinogen-III synthase
DJ48_5266	COG0113	porphobilinogen synthase activity
DJ48_5268	COG1388	LysM domain
DJ48_527	COG1979	alcohol dehydrogenase
DJ48_5270	COG0525	valine-tRNA ligase activity
DJ48_5271	COG0285	dihydrofolate synthase activity
DJ48_5275	COG1077	Cell shape determining protein MreB Mrl
DJ48_5276	COG1792	Involved in formation and maintenance of cell shape
DJ48_5279	COG2894	cell division
DJ48_528	COG1979	alcohol dehydrogenase
DJ48_5280	COG0739	heme binding
DJ48_5281	COG1994	Peptidase M50
DJ48_5282	COG1530	ribonuclease E activity
DJ48_5284	COG2868	ribosomal protein
DJ48_5286	COG3290	protein histidine kinase activity
DJ48_5288	COG0745	RESPONSE REGULATOR receiver
DJ48_529	COG1349	DNA-binding transcription factor activity
DJ48_5290	COG5002	protein histidine kinase activity
DJ48_5291	COG1136	(ABC) transporter
DJ48_5292	COG0577	efflux transmembrane transporter activity
DJ48_5293	COG0577	efflux transmembrane transporter activity
DJ48_5294	COG0077	Prephenate dehydratase
DJ48_5295	COG2258	MOSC domain
DJ48_5296	COG1827	regulation of RNA biosynthetic process
DJ48_5297	COG1104	cysteine desulfurase activity
DJ48_5298	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DJ48_5299	COG0157	Belongs to the NadC ModD family
DJ48_53	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DJ48_530	COG1105	Belongs to the carbohydrate kinase PfkB family
DJ48_5304	COG0640	Transcriptional regulator
DJ48_5305	COG0697	spore germination
DJ48_5306	COG0697	spore germination
DJ48_5308	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
DJ48_531	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DJ48_531	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DJ48_531	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DJ48_5314	COG1862	Preprotein translocase
DJ48_5316	COG2323	membrane
DJ48_5317	COG2244	polysaccharide biosynthetic process
DJ48_5319	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DJ48_5319	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DJ48_532	COG1388	LysM domain
DJ48_532	COG3584	3D domain protein
DJ48_5320	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DJ48_5321	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
DJ48_5321	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DJ48_5323	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DJ48_5326	COG0124	histidyl-tRNA synthetase
DJ48_5328	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DJ48_5330	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DJ48_5331	COG1959	2 iron, 2 sulfur cluster binding
DJ48_5332	COG1104	cysteine desulfurase activity
DJ48_5335	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DJ48_5339	COG0628	permease
DJ48_5341	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DJ48_5345	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DJ48_5351	COG0768	penicillin binding
DJ48_5356	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DJ48_5357	COG0626	cystathionine gamma-synthase activity
DJ48_5358	COG1454	alcohol dehydrogenase
DJ48_5358	COG1012	belongs to the aldehyde dehydrogenase family
DJ48_5360	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DJ48_5368	COG2259	Doxx family
DJ48_5369	COG2514	catechol 2,3-dioxygenase activity
DJ48_5371	COG3186	Phenylalanine-4-hydroxylase
DJ48_5372	COG1404	Belongs to the peptidase S8 family
DJ48_538	COG0464	growth
DJ48_5380	COG2267	carboxylic ester hydrolase activity
DJ48_5382	COG1785	Belongs to the alkaline phosphatase family
DJ48_5385	COG2357	RelA SpoT domain protein
DJ48_5386	COG0778	Nitroreductase
DJ48_5388	COG1595	DNA-templated transcription, initiation
DJ48_5390	COG1191	sigma factor activity
DJ48_5392	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
DJ48_5393	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DJ48_5395	COG1534	Rna-binding protein
DJ48_5397	COG1713	HD superfamily hydrolase involved in NAD metabolism
DJ48_5398	COG0799	negative regulation of ribosome biogenesis
DJ48_5399	COG2226	methyltransferase
DJ48_540	COG2860	membrane
DJ48_5400	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DJ48_5401	COG1596	polysaccharide export
DJ48_5401	COG1555	photosystem II stabilization
DJ48_5402	COG2131	deaminase
DJ48_5403	COG2333	competence protein COMEC
DJ48_5403	COG0658	competence protein
DJ48_5405	COG1466	dna polymerase III delta subunit
DJ48_541	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DJ48_5410	COG1733	regulation of RNA biosynthetic process
DJ48_5411	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DJ48_5413	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DJ48_5417	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DJ48_5418	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DJ48_542	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
DJ48_5420	COG1610	YqeY-like protein
DJ48_5423	COG1702	phosphate starvation-inducible protein PhoH
DJ48_5424	COG1480	7TM receptor with intracellular HD hydrolase
DJ48_5426	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DJ48_5427	COG0295	cytidine deaminase activity
DJ48_5428	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DJ48_543	COG0789	Transcriptional regulator
DJ48_5431	COG0517	IMP dehydrogenase activity
DJ48_5433	COG0358	DNA primase activity
DJ48_5434	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DJ48_5435	COG2010	Cytochrome c
DJ48_5436	COG2384	SAM-dependent methyltransferase
DJ48_5437	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DJ48_544	COG0174	glutamine synthetase
DJ48_5443	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DJ48_5444	COG1121	(ABC) transporter
DJ48_5445	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DJ48_5446	COG0735	belongs to the Fur family
DJ48_5451	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DJ48_5452	COG0477	Major facilitator Superfamily
DJ48_5454	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DJ48_5455	COG0573	inorganic phosphate transmembrane transporter activity
DJ48_5456	COG0581	inorganic phosphate transmembrane transporter activity
DJ48_5457	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DJ48_5458	COG0704	Plays a role in the regulation of phosphate uptake
DJ48_5459	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DJ48_5461	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DJ48_5462	COG4483	Protein conserved in bacteria
DJ48_5463	COG1940	carbohydrate kinase activity
DJ48_5464	COG1940	carbohydrate kinase activity
DJ48_5466	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJ48_5470	COG0626	cystathionine gamma-synthase activity
DJ48_5471	COG0626	cystathionine gamma-synthase activity
DJ48_5472	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DJ48_5472	COG0646	methionine synthase
DJ48_5473	COG0646	methionine synthase
DJ48_5473	COG1410	methionine synthase
DJ48_5474	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DJ48_548	COG1396	sequence-specific DNA binding
DJ48_5484	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DJ48_5485	COG1459	type II secretion system
DJ48_5487	COG4970	Tfp pilus assembly protein FimT
DJ48_5498	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DJ48_55	COG0156	8-amino-7-oxononanoate synthase activity
DJ48_5504	COG1725	Transcriptional regulator
DJ48_5505	COG1131	(ABC) transporter
DJ48_5512	COG2076	Multidrug Resistance protein
DJ48_5513	COG2076	Multidrug Resistance protein
DJ48_5515	COG1609	Transcriptional regulator
DJ48_5516	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DJ48_5517	COG0095	Lipoate-protein ligase
DJ48_5522	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DJ48_5523	COG3872	metal-dependent enzyme
DJ48_5526	COG0006	proline dipeptidase activity
DJ48_5531	COG3854	ATPases associated with a variety of cellular activities
DJ48_5540	COG0511	ligase activity, forming carbon-carbon bonds
DJ48_5541	COG0439	Biotin carboxylase
DJ48_5542	COG1302	Protein conserved in bacteria
DJ48_5547	COG0142	geranyltranstransferase activity
DJ48_5560	COG1192	Involved in chromosome partitioning
DJ48_5565	COG2801	Transposase and inactivated derivatives
DJ48_5571	COG1683	Conserved Protein
DJ48_5572	COG1309	transcriptional regulator
DJ48_5589	COG0681	Belongs to the peptidase S26 family
DJ48_5595	COG1280	lysine exporter protein (LysE YggA)
DJ48_56	COG1073	alpha beta
DJ48_56	COG2226	methyltransferase
DJ48_5601	COG4166	transmembrane transport
DJ48_5604	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DJ48_5614	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DJ48_5615	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DJ48_5629	COG0741	lytic transglycosylase activity
DJ48_5629	COG0791	NLP P60 protein
DJ48_564	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
DJ48_57	COG4106	trans-aconitate 2-methyltransferase activity
DJ48_572	COG1595	DNA-templated transcription, initiation
DJ48_58	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
DJ48_6	COG0745	RESPONSE REGULATOR receiver
DJ48_602	COG4824	toxin secretion phage lysis holin
DJ48_603	COG1388	LysM domain
DJ48_603	COG3409	Peptidoglycan-binding domain 1 protein
DJ48_603	COG5632	N-Acetylmuramoyl-L-alanine amidase
DJ48_611	COG1695	Transcriptional regulator
DJ48_615	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DJ48_617	COG0737	Belongs to the 5'-nucleotidase family
DJ48_62	COG0307	riboflavin synthase, alpha
DJ48_620	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
DJ48_621	COG3639	organic phosphonate transmembrane transporter activity
DJ48_627	COG1132	(ABC) transporter
DJ48_628	COG1132	(ABC) transporter
DJ48_63	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DJ48_63	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DJ48_631	COG5632	N-Acetylmuramoyl-L-alanine amidase
DJ48_631	COG3409	Peptidoglycan-binding domain 1 protein
DJ48_633	COG0730	response to heat
DJ48_636	COG1346	cytolysis
DJ48_638	COG0583	DNA-binding transcription factor activity
DJ48_640	COG1131	(ABC) transporter
DJ48_644	COG0785	Cytochrome C biogenesis protein
DJ48_645	COG4846	Membrane protein involved in cytochrome C biogenesis
DJ48_652	COG2226	methyltransferase
DJ48_657	COG0010	Belongs to the arginase family
DJ48_658	COG1329	Transcriptional regulator
DJ48_659	COG1902	pentaerythritol trinitrate reductase activity
DJ48_66	COG1073	alpha beta
DJ48_660	COG0069	glutamate synthase activity
DJ48_661	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DJ48_662	COG0346	lactoylglutathione lyase activity
DJ48_663	COG0400	carboxylic ester hydrolase activity
DJ48_664	COG5002	protein histidine kinase activity
DJ48_666	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DJ48_67	COG0456	acetyltransferase
DJ48_675	COG0318	PFAM AMP-dependent synthetase and ligase
DJ48_676	COG1268	BioY protein
DJ48_677	COG0318	PFAM AMP-dependent synthetase and ligase
DJ48_678	COG0183	Belongs to the thiolase family
DJ48_68	COG1609	Transcriptional regulator
DJ48_681	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DJ48_683	COG2211	Major facilitator Superfamily
DJ48_687	COG0726	polysaccharide deacetylase
DJ48_689	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DJ48_69	COG2056	Na+-H+ antiporter family
DJ48_690	COG2274	protein secretion by the type I secretion system
DJ48_692	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DJ48_698	COG0824	Thioesterase
DJ48_699	COG4841	protein insertion into membrane
DJ48_70	COG0596	Alpha beta hydrolase
DJ48_700	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DJ48_703	COG0745	RESPONSE REGULATOR receiver
DJ48_704	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DJ48_705	COG1832	CoA-binding protein
DJ48_706	COG0187	DNA topoisomerase II activity
DJ48_707	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DJ48_708	COG0673	inositol 2-dehydrogenase activity
DJ48_710	COG1131	(ABC) transporter
DJ48_713	COG1595	DNA-templated transcription, initiation
DJ48_715	COG1316	TRANSCRIPTIONal
DJ48_716	COG1316	TRANSCRIPTIONal
DJ48_717	COG1301	dicarboxylic acid transport
DJ48_718	COG4166	transmembrane transport
DJ48_719	COG4166	transmembrane transport
DJ48_72	COG4085	toxin activity
DJ48_72	COG1525	nuclease
DJ48_72	COG0737	Belongs to the 5'-nucleotidase family
DJ48_720	COG4166	transmembrane transport
DJ48_721	COG2226	methyltransferase
DJ48_729	COG0697	spore germination
DJ48_731	COG3383	formate dehydrogenase (NAD+) activity
DJ48_732	COG2427	Protein of unknown function (DUF1641)
DJ48_733	COG5609	conserved protein (DUF2294)
DJ48_734	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DJ48_736	COG2116	formate transmembrane transporter activity
DJ48_737	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DJ48_738	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DJ48_739	COG0303	'Molybdopterin
DJ48_74	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DJ48_74	COG0456	acetyltransferase
DJ48_740	COG0314	molybdopterin synthase activity
DJ48_742	COG0489	protein tyrosine kinase activity
DJ48_745	COG3326	Membrane
DJ48_746	COG2962	Rard protein
DJ48_747	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
DJ48_748	COG1657	PFAM Prenyltransferase squalene oxidase
DJ48_75	COG0656	L-ascorbic acid biosynthetic process
DJ48_750	COG1028	Short-chain dehydrogenase reductase Sdr
DJ48_751	COG1012	belongs to the aldehyde dehydrogenase family
DJ48_753	COG4145	pantothenate transmembrane transporter activity
DJ48_756	COG0165	Argininosuccinate lyase
DJ48_758	COG1028	Short-chain dehydrogenase reductase Sdr
DJ48_76	COG0667	Aldo Keto reductase
DJ48_766	COG0716	FMN binding
DJ48_768	COG1278	Cold shock
DJ48_774	COG2720	vancomycin resistance protein
DJ48_775	COG2514	catechol 2,3-dioxygenase activity
DJ48_777	COG1285	pathogenesis
DJ48_779	COG1024	Enoyl-CoA hydratase
DJ48_780	COG1216	Glycosyl transferase, family 2
DJ48_786	COG0277	FAD linked oxidase domain protein
DJ48_787	COG0385	Bile acid
DJ48_789	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DJ48_790	COG2808	Putative FMN-binding domain
DJ48_792	COG0457	Tetratricopeptide repeat
DJ48_794	COG0604	alcohol dehydrogenase
DJ48_795	COG0640	Transcriptional regulator
DJ48_799	COG0584	glycerophosphoryl diester phosphodiesterase
DJ48_8	COG3093	addiction module antidote protein HigA
DJ48_80	COG1300	Membrane
DJ48_805	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DJ48_806	COG1164	Oligoendopeptidase f
DJ48_807	COG2162	N-hydroxyarylamine O-acetyltransferase activity
DJ48_81	COG0735	belongs to the Fur family
DJ48_810	COG1193	negative regulation of DNA recombination
DJ48_814	COG0583	DNA-binding transcription factor activity
DJ48_820	COG0384	phenazine biosynthesis protein PhzF
DJ48_821	COG3739	integral membrane protein
DJ48_822	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ48_823	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DJ48_824	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DJ48_828	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DJ48_829	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DJ48_83	COG4974	Belongs to the 'phage' integrase family
DJ48_835	COG2814	Major facilitator Superfamily
DJ48_836	COG1113	amino acid transport
DJ48_837	COG0604	alcohol dehydrogenase
DJ48_844	COG2072	flavoprotein involved in K transport
DJ48_851	COG3757	hydrolase, family 25
DJ48_851	COG3409	Peptidoglycan-binding domain 1 protein
DJ48_852	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJ48_855	COG1151	hydroxylamine reductase activity
DJ48_860	COG3152	Membrane
DJ48_864	COG1309	transcriptional regulator
DJ48_867	COG1191	sigma factor activity
DJ48_870	COG0726	polysaccharide deacetylase
DJ48_874	COG1733	regulation of RNA biosynthetic process
DJ48_875	COG2249	NAD(P)H dehydrogenase (quinone) activity
DJ48_877	COG0318	PFAM AMP-dependent synthetase and ligase
DJ48_878	COG0318	PFAM AMP-dependent synthetase and ligase
DJ48_88	COG0598	Magnesium transport protein CorA
DJ48_880	COG1028	Short-chain dehydrogenase reductase Sdr
DJ48_882	COG0384	phenazine biosynthesis protein PhzF
DJ48_886	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DJ48_889	COG1733	regulation of RNA biosynthetic process
DJ48_890	COG1733	regulation of RNA biosynthetic process
DJ48_891	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DJ48_892	COG0673	inositol 2-dehydrogenase activity
DJ48_893	COG2188	Transcriptional regulator
DJ48_894	COG1733	regulation of RNA biosynthetic process
DJ48_895	COG1393	Belongs to the ArsC family
DJ48_9	COG0584	glycerophosphoryl diester phosphodiesterase
DJ48_900	COG0814	amino acid
DJ48_901	COG0346	lactoylglutathione lyase activity
DJ48_904	COG2814	Major facilitator Superfamily
DJ48_905	COG0656	L-ascorbic acid biosynthetic process
DJ48_91	COG1846	Transcriptional regulator
DJ48_910	COG1028	Short-chain dehydrogenase reductase Sdr
DJ48_913	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DJ48_914	COG0604	alcohol dehydrogenase
DJ48_915	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DJ48_916	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DJ48_918	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DJ48_919	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
DJ48_920	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DJ48_922	COG1070	Carbohydrate kinase
DJ48_923	COG2706	6-phosphogluconolactonase activity
DJ48_924	COG3813	Protein conserved in bacteria
DJ48_925	COG1357	PFAM Pentapeptide repeats (8 copies)
DJ48_926	COG0697	spore germination
DJ48_927	COG0789	Transcriptional regulator
DJ48_928	COG1253	flavin adenine dinucleotide binding
DJ48_934	COG0477	Major facilitator Superfamily
DJ48_936	COG2226	methyltransferase
DJ48_94	COG1131	(ABC) transporter
DJ48_940	COG0628	permease
DJ48_942	COG0180	Tryptophanyl-tRNA synthetase
DJ48_944	COG1136	(ABC) transporter
DJ48_946	COG0110	maltose O-acetyltransferase activity
DJ48_947	COG0738	Major facilitator superfamily
DJ48_948	COG1940	carbohydrate kinase activity
DJ48_949	COG0346	lactoylglutathione lyase activity
DJ48_95	COG1725	Transcriptional regulator
DJ48_956	COG1011	Hydrolase
DJ48_96	COG1686	Belongs to the peptidase S11 family
DJ48_961	COG1131	(ABC) transporter
DJ48_963	COG1028	Short-chain dehydrogenase reductase Sdr
DJ48_967	COG0778	Nitroreductase
DJ48_968	COG1733	regulation of RNA biosynthetic process
DJ48_971	COG0124	histidyl-tRNA synthetase
DJ48_972	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DJ48_973	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DJ48_974	COG3620	sequence-specific DNA binding
DJ48_977	COG2356	endonuclease I
DJ48_978	COG1288	antiporter activity
DJ48_979	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
DJ48_982	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DJ48_983	COG1122	ATPase activity
DJ48_989	COG2249	NAD(P)H dehydrogenase (quinone) activity
DJ48_991	COG2031	fatty acid transporter
DJ48_993	COG1309	transcriptional regulator
DJ48_994	COG2076	Multidrug Resistance protein
DJ48_999	COG1131	(ABC) transporter