BF27_10 SM00448 cheY-homologous receiver domain BF27_10 SM00862 Transcriptional regulatory protein, C terminal BF27_1002 SM00422 helix_turn_helix, mercury resistance BF27_1008 SM00448 cheY-homologous receiver domain BF27_1009 SM00091 PAS domain BF27_1009 SM00387 Histidine kinase-like ATPases BF27_1012 SM00860 SMI1 / KNR4 family BF27_1016 SM00382 ATPases associated with a variety of cellular activities BF27_1030 SM00646 BF27_1030 BF27_1042 SM00635 Bacterial Ig-like domain 2 BF27_1045 SM00957 SecA DEAD-like domain BF27_1045 SM00958 SecA preprotein cross-linking domain BF27_1052 SM00729 Elongator protein 3, MiaB family, Radical SAM BF27_1054 SM00644 BF27_1054 BF27_1069 SM00382 ATPases associated with a variety of cellular activities BF27_1071 SM00062 Bacterial periplasmic substrate-binding proteins BF27_1071 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF27_1072 SM00382 ATPases associated with a variety of cellular activities BF27_1074 SM00382 ATPases associated with a variety of cellular activities BF27_1080 SM01060 BF27_1080 BF27_1093 SM00344 helix_turn_helix ASNC type BF27_1113 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BF27_1124 SM00382 ATPases associated with a variety of cellular activities BF27_1126 SM00287 Bacterial SH3 domain homologues BF27_1136 SM00829 Enoylreductase BF27_114 SM00833 Cobalamin synthesis protein cobW C-terminal domain BF27_1141 SM00450 Rhodanese Homology Domain BF27_1145 SM00450 Rhodanese Homology Domain BF27_1145 SM00849 Metallo-beta-lactamase superfamily BF27_1146 SM00450 Rhodanese Homology Domain BF27_1148 SM00450 Rhodanese Homology Domain BF27_1151 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_116 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_116 SM00895 BF27_116 BF27_1164 SM00354 helix_turn _helix lactose operon repressor BF27_1166 SM00640 Glycosyl hydrolases family 32 BF27_1174 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_1191 SM00382 ATPases associated with a variety of cellular activities BF27_1193 SM00287 Bacterial SH3 domain homologues BF27_1196 SM00116 Domain in cystathionine beta-synthase and other proteins. BF27_12 SM00729 Elongator protein 3, MiaB family, Radical SAM BF27_1224 SM00899 BF27_1224 BF27_124 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_1243 SM00530 Helix-turn-helix XRE-family like proteins BF27_1253 SM00530 Helix-turn-helix XRE-family like proteins BF27_1255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF27_1262 SM00770 Zinc dependent phospholipase C (alpha toxin) BF27_1264 SM00829 Enoylreductase BF27_1271 SM00382 ATPases associated with a variety of cellular activities BF27_1274 SM00354 helix_turn _helix lactose operon repressor BF27_1277 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_1279 SM00382 ATPases associated with a variety of cellular activities BF27_128 SM00855 Phosphoglycerate mutase family BF27_1280 SM00382 ATPases associated with a variety of cellular activities BF27_1288 SM00448 cheY-homologous receiver domain BF27_1288 SM00862 Transcriptional regulatory protein, C terminal BF27_1289 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_1289 SM00387 Histidine kinase-like ATPases BF27_1289 SM00388 His Kinase A (phosphoacceptor) domain BF27_1299 SM00062 Bacterial periplasmic substrate-binding proteins BF27_1299 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF27_1300 SM00382 ATPases associated with a variety of cellular activities BF27_1307 SM00642 Alpha-amylase domain BF27_1309 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_1309 SM00866 BF27_1309 BF27_131 SM00835 Cupin BF27_1311 SM00052 Putative diguanylate phosphodiesterase BF27_1311 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BF27_1311 SM00091 PAS domain BF27_1311 SM00267 diguanylate cyclase BF27_1314 SM00155 Phospholipase D. Active site motifs. BF27_1315 SM00382 ATPases associated with a variety of cellular activities BF27_1316 SM00327 von Willebrand factor (vWF) type A domain BF27_1321 SM00382 ATPases associated with a variety of cellular activities BF27_1327 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_1330 SM01091 Transporter associated domain BF27_1340 SM00028 Tetratricopeptide repeats BF27_1340 SM00530 Helix-turn-helix XRE-family like proteins BF27_1343 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_1345 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BF27_1345 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BF27_1348 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BF27_1348 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF27_135 SM00849 Metallo-beta-lactamase superfamily BF27_135 SM01027 Beta-Casp domain BF27_1352 SM00448 cheY-homologous receiver domain BF27_1352 SM00862 Transcriptional regulatory protein, C terminal BF27_1353 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_1353 SM00387 Histidine kinase-like ATPases BF27_1353 SM00388 His Kinase A (phosphoacceptor) domain BF27_1355 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_1358 SM00919 Malic enzyme, NAD binding domain BF27_1358 SM01274 BF27_1358 BF27_1360 SM00448 cheY-homologous receiver domain BF27_1361 SM00387 Histidine kinase-like ATPases BF27_1362 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF27_1362 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_1365 SM00387 Histidine kinase-like ATPases BF27_1365 SM00388 His Kinase A (phosphoacceptor) domain BF27_1366 SM00448 cheY-homologous receiver domain BF27_1366 SM00862 Transcriptional regulatory protein, C terminal BF27_1371 SM00382 ATPases associated with a variety of cellular activities BF27_1373 SM00248 ankyrin repeats BF27_1377 SM00448 cheY-homologous receiver domain BF27_1378 SM00091 PAS domain BF27_1378 SM00387 Histidine kinase-like ATPases BF27_138 SM00382 ATPases associated with a variety of cellular activities BF27_1381 SM00244 prohibitin homologues BF27_1383 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BF27_1386 SM00364 Leucine-rich repeats, bacterial type BF27_1386 SM00365 Leucine-rich repeat, SDS22-like subfamily BF27_1386 SM00369 Leucine-rich repeats, typical (most populated) subfamily BF27_1386 SM00725 NEAr Transporter domain BF27_1388 SM00763 PrkA AAA domain BF27_1390 SM00052 Putative diguanylate phosphodiesterase BF27_1390 SM00091 PAS domain BF27_1390 SM00267 diguanylate cyclase BF27_1393 SM00567 E-Z type HEAT repeats BF27_1422 SM00382 ATPases associated with a variety of cellular activities BF27_1426 SM00382 ATPases associated with a variety of cellular activities BF27_143 SM00530 Helix-turn-helix XRE-family like proteins BF27_1431 SM00478 endonuclease III BF27_1431 SM00525 BF27_1431 BF27_1458 SM00530 Helix-turn-helix XRE-family like proteins BF27_1462 SM00382 ATPases associated with a variety of cellular activities BF27_1511 SM00382 ATPases associated with a variety of cellular activities BF27_1519 SM00530 Helix-turn-helix XRE-family like proteins BF27_1526 SM00478 endonuclease III BF27_154 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF27_1545 SM00226 Low molecular weight phosphatase family BF27_1547 SM00831 Cation transporter/ATPase, N-terminus BF27_1557 SM00946 Prolyl-tRNA synthetase, C-terminal BF27_156 SM00382 ATPases associated with a variety of cellular activities BF27_156 SM00962 SRP54-type protein, GTPase domain BF27_1563 SM00530 Helix-turn-helix XRE-family like proteins BF27_1569 SM00060 Fibronectin type 3 domain BF27_1569 SM00636 BF27_1569 BF27_1569 SM00637 BF27_1569 BF27_1570 SM00382 ATPases associated with a variety of cellular activities BF27_1571 SM00382 ATPases associated with a variety of cellular activities BF27_1576 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF27_1576 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_1580 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BF27_1580 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BF27_1580 SM00493 BF27_1580 BF27_1584 SM00642 Alpha-amylase domain BF27_1585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF27_1585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_1586 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF27_1586 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_1587 SM00382 ATPases associated with a variety of cellular activities BF27_1588 SM00062 Bacterial periplasmic substrate-binding proteins BF27_1588 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF27_1609 SM01007 Class II Aldolase and Adducin N-terminal domain BF27_1618 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BF27_1631 SM00382 ATPases associated with a variety of cellular activities BF27_1634 SM00046 Diacylglycerol kinase catalytic domain (presumed) BF27_1635 SM00845 GatB domain BF27_1639 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_1645 SM00382 ATPases associated with a variety of cellular activities BF27_1645 SM00930 BF27_1645 BF27_1651 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BF27_1651 SM00292 breast cancer carboxy-terminal domain BF27_1651 SM00532 Ligase N family BF27_1655 SM00244 prohibitin homologues BF27_1657 SM01209 BF27_1657 BF27_1657 SM01210 BF27_1657 BF27_1658 SM00798 AICARFT/IMPCHase bienzyme BF27_1658 SM00851 MGS-like domain BF27_1663 SM01211 BF27_1663 BF27_1666 SM00998 Adenylosuccinate lyase C-terminus BF27_1668 SM01001 AIR carboxylase BF27_1671 SM00448 cheY-homologous receiver domain BF27_1671 SM00862 Transcriptional regulatory protein, C terminal BF27_1672 SM00387 Histidine kinase-like ATPases BF27_1672 SM00388 His Kinase A (phosphoacceptor) domain BF27_1673 SM00382 ATPases associated with a variety of cellular activities BF27_1691 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_1691 SM00387 Histidine kinase-like ATPases BF27_1691 SM00388 His Kinase A (phosphoacceptor) domain BF27_1692 SM00448 cheY-homologous receiver domain BF27_1692 SM00862 Transcriptional regulatory protein, C terminal BF27_1696 SM00883 Chaperonin 10 Kd subunit BF27_1699 SM00881 CoA binding domain BF27_1700 SM00382 ATPases associated with a variety of cellular activities BF27_171 SM00028 Tetratricopeptide repeats BF27_174 SM00028 Tetratricopeptide repeats BF27_1744 SM00731 SprT homologues. BF27_1745 SM00316 Ribosomal protein S1-like RNA-binding domain BF27_1745 SM00732 Likely ribonuclease with RNase H fold. BF27_1748 SM01005 Alanine racemase, C-terminal domain BF27_1753 SM00487 DEAD-like helicases superfamily BF27_1753 SM00490 helicase superfamily c-terminal domain BF27_1766 SM00382 ATPases associated with a variety of cellular activities BF27_1767 SM00382 ATPases associated with a variety of cellular activities BF27_1773 SM00382 ATPases associated with a variety of cellular activities BF27_1783 SM00354 helix_turn _helix lactose operon repressor BF27_1785 SM00563 Phosphate acyltransferases BF27_180 SM00260 Two component signalling adaptor domain BF27_180 SM00448 cheY-homologous receiver domain BF27_1803 SM00342 helix_turn_helix, arabinose operon control protein BF27_1806 SM00382 ATPases associated with a variety of cellular activities BF27_1807 SM00382 ATPases associated with a variety of cellular activities BF27_1817 SM00829 Enoylreductase BF27_1819 SM00382 ATPases associated with a variety of cellular activities BF27_1819 SM00930 BF27_1819 BF27_1828 SM01350 BF27_1828 BF27_1831 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_1831 SM00895 BF27_1831 BF27_1855 SM01251 BF27_1855 BF27_1858 SM00646 BF27_1858 BF27_1864 SM00382 ATPases associated with a variety of cellular activities BF27_1865 SM00382 ATPases associated with a variety of cellular activities BF27_1867 SM00662 RNA polymerases D BF27_187 SM00382 ATPases associated with a variety of cellular activities BF27_1871 SM00316 Ribosomal protein S1-like RNA-binding domain BF27_1883 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BF27_1884 SM01374 BF27_1884 BF27_1888 SM00322 K homology RNA-binding domain BF27_1891 SM01382 BF27_1891 BF27_1891 SM01383 BF27_1891 BF27_1895 SM01403 BF27_1895 BF27_1897 SM00838 Elongation factor G C-terminus BF27_1897 SM00889 Elongation factor G, domain IV BF27_1901 SM00663 RNA polymerase I subunit A N-terminus BF27_1907 SM00649 Ribosomal protein L11/L12 BF27_1908 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BF27_1910 SM00421 helix_turn_helix, Lux Regulon BF27_1912 SM00967 RNA 2'-O ribose methyltransferase substrate binding BF27_1913 SM00535 Ribonuclease III family BF27_1914 SM00840 BF27_1914 BF27_1919 SM00670 Large family of predicted nucleotide-binding domains BF27_1921 SM00382 ATPases associated with a variety of cellular activities BF27_1922 SM00382 ATPases associated with a variety of cellular activities BF27_1922 SM01086 C-terminal, D2-small domain, of ClpB protein BF27_1932 SM00530 Helix-turn-helix XRE-family like proteins BF27_1934 SM00905 Dihydroneopterin aldolase BF27_1942 SM00382 ATPases associated with a variety of cellular activities BF27_1944 SM00977 TilS substrate C-terminal domain BF27_1945 SM00331 Sigma factor PP2C-like phosphatases BF27_1945 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BF27_1948 SM00316 Ribosomal protein S1-like RNA-binding domain BF27_1952 SM00363 S4 RNA-binding domain BF27_1955 SM00966 SpoVT / AbrB like domain BF27_1956 SM00487 DEAD-like helicases superfamily BF27_1956 SM00490 helicase superfamily c-terminal domain BF27_1956 SM00982 BF27_1956 BF27_1956 SM01058 CarD-like/TRCF domain BF27_1960 SM01400 BF27_1960 BF27_1969 SM00650 Ribosomal RNA adenine dimethylases BF27_1970 SM00493 BF27_1970 BF27_1973 SM00966 SpoVT / AbrB like domain BF27_1991 SM00493 BF27_1991 BF27_1993 SM00382 ATPases associated with a variety of cellular activities BF27_2003 SM00936 Penicillin-binding protein 5, C-terminal domain BF27_2004 SM00116 Domain in cystathionine beta-synthase and other proteins. BF27_2004 SM01240 BF27_2004 BF27_2012 SM00434 DNA Topoisomerase IV BF27_2013 SM00387 Histidine kinase-like ATPases BF27_2013 SM00433 TopoisomeraseII BF27_2016 SM00480 DNA polymerase III beta subunit BF27_2017 SM00382 ATPases associated with a variety of cellular activities BF27_2017 SM00760 Bacterial dnaA protein helix-turn-helix domain BF27_202 SM00138 Methyltransferase, chemotaxis proteins BF27_2021 SM00393 Putative single-stranded nucleic acids-binding domain BF27_2021 SM01245 BF27_2021 BF27_2023 SM01228 BF27_2023 BF27_2025 SM00470 ParB-like nuclease domain BF27_2027 SM00470 ParB-like nuclease domain BF27_2036 SM00267 diguanylate cyclase BF27_2039 SM00788 Adenylosuccinate synthetase BF27_2044 SM00448 cheY-homologous receiver domain BF27_2044 SM00862 Transcriptional regulatory protein, C terminal BF27_2045 SM00091 PAS domain BF27_2045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_2045 SM00387 Histidine kinase-like ATPases BF27_2045 SM00388 His Kinase A (phosphoacceptor) domain BF27_2048 SM00849 Metallo-beta-lactamase superfamily BF27_2049 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF27_2054 SM01240 BF27_2054 BF27_2056 SM00487 DEAD-like helicases superfamily BF27_2056 SM00490 helicase superfamily c-terminal domain BF27_206 SM00073 Histidine Phosphotransfer domain BF27_206 SM00260 Two component signalling adaptor domain BF27_206 SM00387 Histidine kinase-like ATPases BF27_206 SM01231 BF27_206 BF27_2067 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BF27_2067 SM00387 Histidine kinase-like ATPases BF27_2068 SM00448 cheY-homologous receiver domain BF27_2068 SM00850 LytTr DNA-binding domain BF27_207 SM00448 cheY-homologous receiver domain BF27_2080 SM00382 ATPases associated with a variety of cellular activities BF27_2085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF27_2091 SM00448 cheY-homologous receiver domain BF27_2091 SM00850 LytTr DNA-binding domain BF27_2094 SM00267 diguanylate cyclase BF27_2096 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BF27_2098 SM00421 helix_turn_helix, Lux Regulon BF27_2098 SM00448 cheY-homologous receiver domain BF27_2100 SM00100 Cyclic nucleotide-monophosphate binding domain BF27_2107 SM00354 helix_turn _helix lactose operon repressor BF27_2109 SM00382 ATPases associated with a variety of cellular activities BF27_2111 SM00986 Uracil DNA glycosylase superfamily BF27_2111 SM00987 UreE urease accessory protein, C-terminal domain BF27_2120 SM00936 Penicillin-binding protein 5, C-terminal domain BF27_2129 SM00382 ATPases associated with a variety of cellular activities BF27_2131 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF27_2137 SM00422 helix_turn_helix, mercury resistance BF27_2145 SM00836 DALR anticodon binding domain BF27_2145 SM01016 Arginyl tRNA synthetase N terminal dom BF27_2154 SM00382 ATPases associated with a variety of cellular activities BF27_2156 SM00387 Histidine kinase-like ATPases BF27_2157 SM00421 helix_turn_helix, Lux Regulon BF27_2157 SM00448 cheY-homologous receiver domain BF27_2158 SM00530 Helix-turn-helix XRE-family like proteins BF27_2161 SM00052 Putative diguanylate phosphodiesterase BF27_2161 SM00267 diguanylate cyclase BF27_2163 SM00155 Phospholipase D. Active site motifs. BF27_2173 SM00448 cheY-homologous receiver domain BF27_2177 SM00357 Cold shock protein domain BF27_2177 SM00382 ATPases associated with a variety of cellular activities BF27_2177 SM00959 Rho termination factor, N-terminal domain BF27_2180 SM00937 BF27_2180 BF27_2187 SM00903 Flavin reductase like domain BF27_2190 SM00226 Low molecular weight phosphatase family BF27_22 SM00850 LytTr DNA-binding domain BF27_2203 SM00382 ATPases associated with a variety of cellular activities BF27_2207 SM00052 Putative diguanylate phosphodiesterase BF27_2207 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BF27_2207 SM00091 PAS domain BF27_2207 SM00267 diguanylate cyclase BF27_2223 SM00850 LytTr DNA-binding domain BF27_2224 SM00382 ATPases associated with a variety of cellular activities BF27_2236 SM00984 UDP binding domain BF27_2238 SM00287 Bacterial SH3 domain homologues BF27_2238 SM00382 ATPases associated with a variety of cellular activities BF27_2244 SM00448 cheY-homologous receiver domain BF27_2244 SM00862 Transcriptional regulatory protein, C terminal BF27_2245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_2245 SM00387 Histidine kinase-like ATPases BF27_2245 SM00388 His Kinase A (phosphoacceptor) domain BF27_2250 SM00530 Helix-turn-helix XRE-family like proteins BF27_2252 SM00382 ATPases associated with a variety of cellular activities BF27_226 SM00422 helix_turn_helix, mercury resistance BF27_226 SM00871 Bacterial transcription activator, effector binding domain BF27_2261 SM00487 DEAD-like helicases superfamily BF27_2261 SM00490 helicase superfamily c-terminal domain BF27_2267 SM00287 Bacterial SH3 domain homologues BF27_227 SM00849 Metallo-beta-lactamase superfamily BF27_2273 SM00287 Bacterial SH3 domain homologues BF27_2274 SM00287 Bacterial SH3 domain homologues BF27_2305 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BF27_2306 SM00382 ATPases associated with a variety of cellular activities BF27_2317 SM00487 DEAD-like helicases superfamily BF27_2317 SM00490 helicase superfamily c-terminal domain BF27_2319 SM00357 Cold shock protein domain BF27_2321 SM00957 SecA DEAD-like domain BF27_2321 SM00958 SecA preprotein cross-linking domain BF27_2322 SM00937 BF27_2322 BF27_2324 SM00382 ATPases associated with a variety of cellular activities BF27_2326 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF27_2326 SM00245 tail specific protease BF27_2328 SM00382 ATPases associated with a variety of cellular activities BF27_2330 SM00382 ATPases associated with a variety of cellular activities BF27_2332 SM00422 helix_turn_helix, mercury resistance BF27_2335 SM00530 Helix-turn-helix XRE-family like proteins BF27_2339 SM00422 helix_turn_helix, mercury resistance BF27_2343 SM00487 DEAD-like helicases superfamily BF27_2343 SM00490 helicase superfamily c-terminal domain BF27_2351 SM00028 Tetratricopeptide repeats BF27_237 SM00357 Cold shock protein domain BF27_2371 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF27_2375 SM01192 BF27_2375 BF27_2375 SM01193 BF27_2375 BF27_2402 SM00316 Ribosomal protein S1-like RNA-binding domain BF27_2402 SM00357 Cold shock protein domain BF27_2402 SM00955 BF27_2402 BF27_2404 SM00448 cheY-homologous receiver domain BF27_2404 SM00862 Transcriptional regulatory protein, C terminal BF27_2408 SM00382 ATPases associated with a variety of cellular activities BF27_2418 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF27_2419 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BF27_2421 SM00363 S4 RNA-binding domain BF27_2428 SM01276 BF27_2428 BF27_2447 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_2451 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF27_2451 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_2455 SM00387 Histidine kinase-like ATPases BF27_2455 SM00388 His Kinase A (phosphoacceptor) domain BF27_2456 SM00448 cheY-homologous receiver domain BF27_2456 SM00862 Transcriptional regulatory protein, C terminal BF27_2461 SM00530 Helix-turn-helix XRE-family like proteins BF27_2476 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF27_2476 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_2485 SM00849 Metallo-beta-lactamase superfamily BF27_249 SM00857 Resolvase, N terminal domain BF27_2502 SM00493 BF27_2502 BF27_2505 SM00382 ATPases associated with a variety of cellular activities BF27_2505 SM00930 BF27_2505 BF27_2509 SM00382 ATPases associated with a variety of cellular activities BF27_2520 SM00729 Elongator protein 3, MiaB family, Radical SAM BF27_2522 SM00855 Phosphoglycerate mutase family BF27_2525 SM00422 helix_turn_helix, mercury resistance BF27_2532 SM00420 helix_turn_helix, Deoxyribose operon repressor BF27_2545 SM00860 SMI1 / KNR4 family BF27_2550 SM00382 ATPases associated with a variety of cellular activities BF27_2560 SM00871 Bacterial transcription activator, effector binding domain BF27_257 SM00530 Helix-turn-helix XRE-family like proteins BF27_2579 SM00479 BF27_2579 BF27_2580 SM01298 BF27_2580 BF27_2587 SM00344 helix_turn_helix ASNC type BF27_2589 SM00316 Ribosomal protein S1-like RNA-binding domain BF27_259 SM00644 BF27_259 BF27_2621 SM00642 Alpha-amylase domain BF27_2629 SM00357 Cold shock protein domain BF27_2637 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BF27_2638 SM00448 cheY-homologous receiver domain BF27_2638 SM00862 Transcriptional regulatory protein, C terminal BF27_2648 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_2648 SM00866 BF27_2648 BF27_2652 SM00382 ATPases associated with a variety of cellular activities BF27_2655 SM00387 Histidine kinase-like ATPases BF27_2656 SM00448 cheY-homologous receiver domain BF27_2656 SM00862 Transcriptional regulatory protein, C terminal BF27_2657 SM00342 helix_turn_helix, arabinose operon control protein BF27_2657 SM00871 Bacterial transcription activator, effector binding domain BF27_2658 SM00382 ATPases associated with a variety of cellular activities BF27_2668 SM00046 Diacylglycerol kinase catalytic domain (presumed) BF27_2674 SM00448 cheY-homologous receiver domain BF27_2674 SM00862 Transcriptional regulatory protein, C terminal BF27_2675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_2675 SM00387 Histidine kinase-like ATPases BF27_2675 SM00388 His Kinase A (phosphoacceptor) domain BF27_2677 SM00899 BF27_2677 BF27_2689 SM00894 Excalibur calcium-binding domain BF27_2693 SM01234 BF27_2693 BF27_2694 SM00947 Carbonic anhydrase BF27_2706 SM00382 ATPases associated with a variety of cellular activities BF27_2712 SM00387 Histidine kinase-like ATPases BF27_2712 SM00388 His Kinase A (phosphoacceptor) domain BF27_2713 SM00387 Histidine kinase-like ATPases BF27_2724 SM00852 Probable molybdopterin binding domain BF27_2727 SM00014 Acid phosphatase homologues BF27_2735 SM00382 ATPases associated with a variety of cellular activities BF27_2737 SM00729 Elongator protein 3, MiaB family, Radical SAM BF27_2741 SM00382 ATPases associated with a variety of cellular activities BF27_2756 SM00450 Rhodanese Homology Domain BF27_2760 SM00729 Elongator protein 3, MiaB family, Radical SAM BF27_2763 SM00852 Probable molybdopterin binding domain BF27_2770 SM01058 CarD-like/TRCF domain BF27_2775 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_278 SM00507 HNH nucleases BF27_2780 SM00363 S4 RNA-binding domain BF27_2781 SM00420 helix_turn_helix, Deoxyribose operon repressor BF27_2784 SM00642 Alpha-amylase domain BF27_2788 SM00849 Metallo-beta-lactamase superfamily BF27_2796 SM00843 BF27_2796 BF27_2807 SM00354 helix_turn _helix lactose operon repressor BF27_2814 SM00248 ankyrin repeats BF27_2815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_2815 SM00387 Histidine kinase-like ATPases BF27_2815 SM00388 His Kinase A (phosphoacceptor) domain BF27_2816 SM00448 cheY-homologous receiver domain BF27_2816 SM00862 Transcriptional regulatory protein, C terminal BF27_2819 SM00116 Domain in cystathionine beta-synthase and other proteins. BF27_2825 SM00363 S4 RNA-binding domain BF27_2828 SM00363 S4 RNA-binding domain BF27_2828 SM01390 BF27_2828 BF27_2836 SM00981 BF27_2836 BF27_2861 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BF27_2861 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BF27_2863 SM00530 Helix-turn-helix XRE-family like proteins BF27_2874 SM00849 Metallo-beta-lactamase superfamily BF27_2876 SM00116 Domain in cystathionine beta-synthase and other proteins. BF27_2883 SM00481 DNA polymerase alpha chain like domain BF27_2884 SM00919 Malic enzyme, NAD binding domain BF27_2884 SM01274 BF27_2884 BF27_2885 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_2894 SM01329 BF27_2894 BF27_2898 SM00448 cheY-homologous receiver domain BF27_2898 SM00862 Transcriptional regulatory protein, C terminal BF27_2899 SM00091 PAS domain BF27_2899 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_2899 SM00387 Histidine kinase-like ATPases BF27_2899 SM00388 His Kinase A (phosphoacceptor) domain BF27_29 SM00854 Bacterial capsule synthesis protein PGA_cap BF27_2900 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BF27_2900 SM00474 3'-5' exonuclease BF27_2900 SM00475 5'-3' exonuclease BF27_2900 SM00482 DNA polymerase A domain BF27_2901 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BF27_2901 SM01232 BF27_2901 BF27_2904 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF27_2908 SM00382 ATPases associated with a variety of cellular activities BF27_2910 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF27_2925 SM00967 RNA 2'-O ribose methyltransferase substrate binding BF27_2927 SM00873 B3/4 domain BF27_2927 SM00874 tRNA synthetase B5 domain BF27_2927 SM00896 Ferredoxin-fold anticodon binding domain BF27_2935 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BF27_2935 SM00481 DNA polymerase alpha chain like domain BF27_2935 SM00483 DNA polymerase X family BF27_2936 SM00463 Small MutS-related domain BF27_2936 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BF27_2936 SM00534 ATPase domain of DNA mismatch repair MUTS family BF27_2938 SM00363 S4 RNA-binding domain BF27_2940 SM00725 NEAr Transporter domain BF27_2941 SM00725 NEAr Transporter domain BF27_2942 SM00725 NEAr Transporter domain BF27_2945 SM00382 ATPases associated with a variety of cellular activities BF27_2949 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BF27_2952 SM00448 cheY-homologous receiver domain BF27_2952 SM00862 Transcriptional regulatory protein, C terminal BF27_2953 SM00387 Histidine kinase-like ATPases BF27_2953 SM00388 His Kinase A (phosphoacceptor) domain BF27_2954 SM00382 ATPases associated with a variety of cellular activities BF27_2967 SM00893 Electron transfer flavoprotein domain BF27_2968 SM00893 Electron transfer flavoprotein domain BF27_2970 SM00465 GIY-YIG type nucleases (URI domain) BF27_2981 SM00382 ATPases associated with a variety of cellular activities BF27_2986 SM00530 Helix-turn-helix XRE-family like proteins BF27_2989 SM00342 helix_turn_helix, arabinose operon control protein BF27_2989 SM00448 cheY-homologous receiver domain BF27_2991 SM00382 ATPases associated with a variety of cellular activities BF27_2992 SM00382 ATPases associated with a variety of cellular activities BF27_30 SM00854 Bacterial capsule synthesis protein PGA_cap BF27_3000 SM00421 helix_turn_helix, Lux Regulon BF27_3007 SM00909 Sporulation and spore germination BF27_3019 SM00382 ATPases associated with a variety of cellular activities BF27_3019 SM00994 ClpX C4-type zinc finger BF27_3019 SM01086 C-terminal, D2-small domain, of ClpB protein BF27_3020 SM00382 ATPases associated with a variety of cellular activities BF27_3021 SM00382 ATPases associated with a variety of cellular activities BF27_3021 SM00464 Found in ATP-dependent protease La (LON) BF27_3024 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_3029 SM01004 Delta-aminolevulinic acid dehydratase BF27_3031 SM00257 Lysin motif BF27_304 SM00530 Helix-turn-helix XRE-family like proteins BF27_3049 SM01317 BF27_3049 BF27_305 SM00530 Helix-turn-helix XRE-family like proteins BF27_3051 SM00448 cheY-homologous receiver domain BF27_3051 SM00862 Transcriptional regulatory protein, C terminal BF27_3053 SM00387 Histidine kinase-like ATPases BF27_3054 SM00382 ATPases associated with a variety of cellular activities BF27_3064 SM00257 Lysin motif BF27_3067 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_3072 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BF27_3073 SM00382 ATPases associated with a variety of cellular activities BF27_3077 SM01323 BF27_3077 BF27_308 SM00857 Resolvase, N terminal domain BF27_3086 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF27_3086 SM00954 Region found in RelA / SpoT proteins BF27_3093 SM00382 ATPases associated with a variety of cellular activities BF27_3097 SM00028 Tetratricopeptide repeats BF27_3104 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF27_3106 SM00732 Likely ribonuclease with RNase H fold. BF27_3125 SM00382 ATPases associated with a variety of cellular activities BF27_3130 SM00530 Helix-turn-helix XRE-family like proteins BF27_3139 SM00855 Phosphoglycerate mutase family BF27_3144 SM00098 Alkaline phosphatase homologues BF27_3148 SM00954 Region found in RelA / SpoT proteins BF27_3158 SM01103 BF27_3158 BF27_3160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF27_3164 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BF27_3166 SM00849 Metallo-beta-lactamase superfamily BF27_3172 SM00838 Elongation factor G C-terminus BF27_3174 SM00729 Elongator protein 3, MiaB family, Radical SAM BF27_3178 SM00271 DnaJ molecular chaperone homology domain BF27_318 SM00530 Helix-turn-helix XRE-family like proteins BF27_3181 SM00729 Elongator protein 3, MiaB family, Radical SAM BF27_3187 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF27_319 SM00644 BF27_319 BF27_3194 SM00116 Domain in cystathionine beta-synthase and other proteins. BF27_3196 SM00400 zinc finger BF27_3196 SM00493 BF27_3196 BF27_3196 SM00766 DNA primase DnaG DnaB-binding BF27_3203 SM00487 DEAD-like helicases superfamily BF27_3203 SM00490 helicase superfamily c-terminal domain BF27_3204 SM00518 AP endonuclease family 2 BF27_3207 SM00382 ATPases associated with a variety of cellular activities BF27_3220 SM00382 ATPases associated with a variety of cellular activities BF27_3229 SM00849 Metallo-beta-lactamase superfamily BF27_3231 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_3236 SM01018 B12 binding domain BF27_3247 SM00382 ATPases associated with a variety of cellular activities BF27_3254 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BF27_3261 SM00487 DEAD-like helicases superfamily BF27_3261 SM00490 helicase superfamily c-terminal domain BF27_3267 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_3268 SM00382 ATPases associated with a variety of cellular activities BF27_3278 SM00354 helix_turn _helix lactose operon repressor BF27_3279 SM00450 Rhodanese Homology Domain BF27_3283 SM00529 Helix-turn-helix diphteria tox regulatory element BF27_3290 SM00841 Elongation factor P, C-terminal BF27_3290 SM01185 BF27_3290 BF27_3294 SM00382 ATPases associated with a variety of cellular activities BF27_3304 SM00878 Biotin carboxylase C-terminal domain BF27_3311 SM00861 Transketolase, pyrimidine binding domain BF27_3312 SM00363 S4 RNA-binding domain BF27_3315 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF27_3316 SM00448 cheY-homologous receiver domain BF27_3321 SM00091 PAS domain BF27_3321 SM00382 ATPases associated with a variety of cellular activities BF27_3323 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF27_3327 SM00861 Transketolase, pyrimidine binding domain BF27_3333 SM00062 Bacterial periplasmic substrate-binding proteins BF27_3333 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BF27_3335 SM00382 ATPases associated with a variety of cellular activities BF27_3344 SM00849 Metallo-beta-lactamase superfamily BF27_3348 SM00849 Metallo-beta-lactamase superfamily BF27_3351 SM00859 Semialdehyde dehydrogenase, NAD binding domain BF27_3358 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_3368 SM00729 Elongator protein 3, MiaB family, Radical SAM BF27_3368 SM00876 Biotin and Thiamin Synthesis associated domain BF27_337 SM00507 HNH nucleases BF27_3374 SM00704 CDGSH-type zinc finger. Function unknown. BF27_3378 SM00354 helix_turn _helix lactose operon repressor BF27_3397 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BF27_3401 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_3404 SM00382 ATPases associated with a variety of cellular activities BF27_3405 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_3406 SM00936 Penicillin-binding protein 5, C-terminal domain BF27_3408 SM00387 Histidine kinase-like ATPases BF27_3427 SM00849 Metallo-beta-lactamase superfamily BF27_3430 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_3430 SM00866 BF27_3430 BF27_3432 SM01061 CAT RNA binding domain BF27_3439 SM00267 diguanylate cyclase BF27_3445 SM01007 Class II Aldolase and Adducin N-terminal domain BF27_3462 SM00382 ATPases associated with a variety of cellular activities BF27_3469 SM00382 ATPases associated with a variety of cellular activities BF27_3470 SM00642 Alpha-amylase domain BF27_3471 SM00642 Alpha-amylase domain BF27_3475 SM00354 helix_turn _helix lactose operon repressor BF27_3478 SM00387 Histidine kinase-like ATPases BF27_3478 SM00388 His Kinase A (phosphoacceptor) domain BF27_3487 SM00267 diguanylate cyclase BF27_3495 SM00052 Putative diguanylate phosphodiesterase BF27_3508 SM00849 Metallo-beta-lactamase superfamily BF27_3514 SM00861 Transketolase, pyrimidine binding domain BF27_3530 SM00838 Elongation factor G C-terminus BF27_3535 SM00670 Large family of predicted nucleotide-binding domains BF27_3539 SM00878 Biotin carboxylase C-terminal domain BF27_3552 SM00855 Phosphoglycerate mutase family BF27_3561 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF27_3567 SM00530 Helix-turn-helix XRE-family like proteins BF27_3570 SM00530 Helix-turn-helix XRE-family like proteins BF27_3571 SM00530 Helix-turn-helix XRE-family like proteins BF27_3576 SM00382 ATPases associated with a variety of cellular activities BF27_3590 SM00530 Helix-turn-helix XRE-family like proteins BF27_3599 SM00507 HNH nucleases BF27_3619 SM00644 BF27_3619 BF27_3622 SM00530 Helix-turn-helix XRE-family like proteins BF27_363 SM00530 Helix-turn-helix XRE-family like proteins BF27_3630 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BF27_3636 SM00740 BF27_3636 BF27_3637 SM00740 BF27_3637 BF27_364 SM00530 Helix-turn-helix XRE-family like proteins BF27_3645 SM00842 Cell division protein FtsA BF27_3646 SM00864 Tubulin/FtsZ family, GTPase domain BF27_3646 SM00865 Tubulin/FtsZ family, C-terminal domain BF27_3655 SM00363 S4 RNA-binding domain BF27_3660 SM00363 S4 RNA-binding domain BF27_3665 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BF27_3666 SM00851 MGS-like domain BF27_3666 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BF27_3666 SM01209 BF27_3666 BF27_3669 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BF27_3678 SM00831 Cation transporter/ATPase, N-terminus BF27_3681 SM00072 Guanylate kinase homologues. BF27_3682 SM01409 BF27_3682 BF27_3684 SM00487 DEAD-like helicases superfamily BF27_3684 SM00490 helicase superfamily c-terminal domain BF27_3689 SM00331 Sigma factor PP2C-like phosphatases BF27_3689 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BF27_3690 SM00220 Serine/Threonine protein kinases, catalytic domain BF27_3690 SM00740 BF27_3690 BF27_3693 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BF27_3696 SM01120 BF27_3696 BF27_3696 SM01121 BF27_3696 BF27_3697 SM00487 DEAD-like helicases superfamily BF27_3697 SM00490 helicase superfamily c-terminal domain BF27_3700 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BF27_3701 SM00822 BF27_3701 BF27_3703 SM00358 Double-stranded RNA binding motif BF27_3703 SM00535 Ribonuclease III family BF27_3704 SM00968 SMC proteins Flexible Hinge Domain BF27_3705 SM00382 ATPases associated with a variety of cellular activities BF27_3705 SM00962 SRP54-type protein, GTPase domain BF27_3705 SM00963 SRP54-type protein, helical bundle domain BF27_3707 SM00382 ATPases associated with a variety of cellular activities BF27_3707 SM00962 SRP54-type protein, GTPase domain BF27_3707 SM00963 SRP54-type protein, helical bundle domain BF27_3717 SM00881 CoA binding domain BF27_3719 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BF27_3719 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BF27_3719 SM00493 BF27_3719 BF27_3723 SM00382 ATPases associated with a variety of cellular activities BF27_3723 SM01086 C-terminal, D2-small domain, of ClpB protein BF27_3732 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF27_3734 SM00479 BF27_3734 BF27_3734 SM00481 DNA polymerase alpha chain like domain BF27_3736 SM00316 Ribosomal protein S1-like RNA-binding domain BF27_3736 SM00322 K homology RNA-binding domain BF27_3743 SM00904 Riboflavin kinase BF27_3744 SM01387 BF27_3744 BF27_3745 SM00316 Ribosomal protein S1-like RNA-binding domain BF27_3745 SM00322 K homology RNA-binding domain BF27_3751 SM00859 Semialdehyde dehydrogenase, NAD binding domain BF27_3753 SM01130 BF27_3753 BF27_3754 SM00849 Metallo-beta-lactamase superfamily BF27_3757 SM00382 ATPases associated with a variety of cellular activities BF27_3757 SM00843 BF27_3757 BF27_3758 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_3758 SM00866 BF27_3758 BF27_3760 SM00382 ATPases associated with a variety of cellular activities BF27_377 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BF27_377 SM00475 5'-3' exonuclease BF27_3771 SM00852 Probable molybdopterin binding domain BF27_3772 SM00382 ATPases associated with a variety of cellular activities BF27_3774 SM00322 K homology RNA-binding domain BF27_3774 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF27_3780 SM00729 Elongator protein 3, MiaB family, Radical SAM BF27_3783 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BF27_3783 SM00534 ATPase domain of DNA mismatch repair MUTS family BF27_3784 SM00853 MutL C terminal dimerisation domain BF27_3784 SM01340 BF27_3784 BF27_3785 SM00382 ATPases associated with a variety of cellular activities BF27_3788 SM00448 cheY-homologous receiver domain BF27_3788 SM00862 Transcriptional regulatory protein, C terminal BF27_3789 SM00387 Histidine kinase-like ATPases BF27_3789 SM00388 His Kinase A (phosphoacceptor) domain BF27_3795 SM00257 Lysin motif BF27_3797 SM00148 Phospholipase C, catalytic domain (part); domain X BF27_3801 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_3806 SM00052 Putative diguanylate phosphodiesterase BF27_3806 SM00091 PAS domain BF27_3806 SM00267 diguanylate cyclase BF27_3813 SM00478 endonuclease III BF27_3815 SM00342 helix_turn_helix, arabinose operon control protein BF27_3821 SM00382 ATPases associated with a variety of cellular activities BF27_3827 SM00411 bacterial (prokaryotic) histone like domain BF27_383 SM00450 Rhodanese Homology Domain BF27_3831 SM00636 BF27_3831 BF27_3838 SM00420 helix_turn_helix, Deoxyribose operon repressor BF27_3838 SM01134 BF27_3838 BF27_3842 SM00287 Bacterial SH3 domain homologues BF27_3848 SM00382 ATPases associated with a variety of cellular activities BF27_3853 SM00422 helix_turn_helix, mercury resistance BF27_3854 SM01230 BF27_3854 BF27_3858 SM00530 Helix-turn-helix XRE-family like proteins BF27_3859 SM00530 Helix-turn-helix XRE-family like proteins BF27_3869 SM00382 ATPases associated with a variety of cellular activities BF27_3884 SM00530 Helix-turn-helix XRE-family like proteins BF27_3913 SM00287 Bacterial SH3 domain homologues BF27_3913 SM00644 BF27_3913 BF27_3919 SM00028 Tetratricopeptide repeats BF27_3925 SM00857 Resolvase, N terminal domain BF27_3929 SM00062 Bacterial periplasmic substrate-binding proteins BF27_3930 SM00382 ATPases associated with a variety of cellular activities BF27_3934 SM00861 Transketolase, pyrimidine binding domain BF27_3937 SM00382 ATPases associated with a variety of cellular activities BF27_3938 SM00382 ATPases associated with a variety of cellular activities BF27_3941 SM00644 BF27_3941 BF27_3950 SM00382 ATPases associated with a variety of cellular activities BF27_396 SM00491 BF27_396 BF27_3968 SM01058 CarD-like/TRCF domain BF27_3974 SM00091 PAS domain BF27_3974 SM00387 Histidine kinase-like ATPases BF27_3974 SM00388 His Kinase A (phosphoacceptor) domain BF27_3977 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BF27_3978 SM00644 BF27_3978 BF27_3978 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BF27_398 SM00981 BF27_398 BF27_3991 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF27_4000 SM00382 ATPases associated with a variety of cellular activities BF27_4003 SM00479 BF27_4003 BF27_4007 SM00257 Lysin motif BF27_4007 SM00636 BF27_4007 BF27_4010 SM01207 BF27_4010 BF27_4013 SM00448 cheY-homologous receiver domain BF27_4013 SM00862 Transcriptional regulatory protein, C terminal BF27_4014 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BF27_4015 SM00881 CoA binding domain BF27_4016 SM00387 Histidine kinase-like ATPases BF27_4016 SM00433 TopoisomeraseII BF27_4017 SM00434 DNA Topoisomerase IV BF27_4020 SM00382 ATPases associated with a variety of cellular activities BF27_4040 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BF27_4040 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF27_4044 SM00729 Elongator protein 3, MiaB family, Radical SAM BF27_4047 SM00852 Probable molybdopterin binding domain BF27_4071 SM01022 BF27_4071 BF27_4076 SM00357 Cold shock protein domain BF27_4077 SM00479 BF27_4077 BF27_4086 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BF27_409 SM00060 Fibronectin type 3 domain BF27_4100 SM00028 Tetratricopeptide repeats BF27_4102 SM00829 Enoylreductase BF27_4103 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_411 SM00478 endonuclease III BF27_411 SM00525 BF27_411 BF27_4116 SM00642 Alpha-amylase domain BF27_4118 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BF27_4118 SM00534 ATPase domain of DNA mismatch repair MUTS family BF27_4120 SM00855 Phosphoglycerate mutase family BF27_4121 SM00829 Enoylreductase BF27_4145 SM00829 Enoylreductase BF27_4146 SM00849 Metallo-beta-lactamase superfamily BF27_4159 SM00641 Glycosyl hydrolases family 25 BF27_416 SM00479 BF27_416 BF27_416 SM00491 BF27_416 BF27_4160 SM00849 Metallo-beta-lactamase superfamily BF27_4166 SM00382 ATPases associated with a variety of cellular activities BF27_4170 SM00871 Bacterial transcription activator, effector binding domain BF27_4178 SM00636 BF27_4178 BF27_4179 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_4180 SM00248 ankyrin repeats BF27_4194 SM00849 Metallo-beta-lactamase superfamily BF27_4201 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_4201 SM00866 BF27_4201 BF27_4207 SM00914 BF27_4207 BF27_4216 SM01276 BF27_4216 BF27_4219 SM00829 Enoylreductase BF27_4222 SM00829 Enoylreductase BF27_4225 SM00861 Transketolase, pyrimidine binding domain BF27_4226 SM01350 BF27_4226 BF27_4234 SM00422 helix_turn_helix, mercury resistance BF27_4235 SM01091 Transporter associated domain BF27_4240 SM00028 Tetratricopeptide repeats BF27_425 SM00851 MGS-like domain BF27_4251 SM00382 ATPases associated with a variety of cellular activities BF27_4253 SM01266 BF27_4253 BF27_4265 SM00530 Helix-turn-helix XRE-family like proteins BF27_4268 SM00382 ATPases associated with a variety of cellular activities BF27_4280 SM01207 BF27_4280 BF27_4281 SM00530 Helix-turn-helix XRE-family like proteins BF27_429 SM00986 Uracil DNA glycosylase superfamily BF27_429 SM00987 UreE urease accessory protein, C-terminal domain BF27_4290 SM00382 ATPases associated with a variety of cellular activities BF27_4303 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_4311 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_4320 SM00287 Bacterial SH3 domain homologues BF27_4320 SM00644 BF27_4320 BF27_4323 SM00342 helix_turn_helix, arabinose operon control protein BF27_4335 SM00344 helix_turn_helix ASNC type BF27_4343 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_4349 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BF27_4354 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF27_4354 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_4354 SM00319 Homologues of the ligand binding domain of Tar BF27_4361 SM00028 Tetratricopeptide repeats BF27_4362 SM00354 helix_turn _helix lactose operon repressor BF27_438 SM00914 BF27_438 BF27_4380 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_4382 SM00448 cheY-homologous receiver domain BF27_4382 SM00862 Transcriptional regulatory protein, C terminal BF27_4383 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_4383 SM00387 Histidine kinase-like ATPases BF27_4383 SM00388 His Kinase A (phosphoacceptor) domain BF27_4385 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_4387 SM00382 ATPases associated with a variety of cellular activities BF27_439 SM00028 Tetratricopeptide repeats BF27_4397 SM00530 Helix-turn-helix XRE-family like proteins BF27_4407 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_4407 SM00387 Histidine kinase-like ATPases BF27_4407 SM00388 His Kinase A (phosphoacceptor) domain BF27_4408 SM00448 cheY-homologous receiver domain BF27_4408 SM00862 Transcriptional regulatory protein, C terminal BF27_4415 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_4420 SM00342 helix_turn_helix, arabinose operon control protein BF27_4427 SM00344 helix_turn_helix ASNC type BF27_443 SM00562 BF27_443 BF27_4431 SM00028 Tetratricopeptide repeats BF27_4434 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_4437 SM00226 Low molecular weight phosphatase family BF27_4442 SM00382 ATPases associated with a variety of cellular activities BF27_4467 SM01060 BF27_4467 BF27_4477 SM00387 Histidine kinase-like ATPases BF27_4478 SM00448 cheY-homologous receiver domain BF27_448 SM00411 bacterial (prokaryotic) histone like domain BF27_4483 SM00919 Malic enzyme, NAD binding domain BF27_4483 SM01274 BF27_4483 BF27_4491 SM00530 Helix-turn-helix XRE-family like proteins BF27_4492 SM00870 BF27_4492 BF27_4510 SM00849 Metallo-beta-lactamase superfamily BF27_4523 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_4527 SM00346 helix_turn_helix isocitrate lyase regulation BF27_4528 SM00796 Allophanate hydrolase subunit 1 BF27_4529 SM00797 Allophanate hydrolase subunit 2 BF27_4557 SM00448 cheY-homologous receiver domain BF27_4557 SM00862 Transcriptional regulatory protein, C terminal BF27_4558 SM00387 Histidine kinase-like ATPases BF27_4558 SM00388 His Kinase A (phosphoacceptor) domain BF27_4562 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_4567 SM00342 helix_turn_helix, arabinose operon control protein BF27_4567 SM00871 Bacterial transcription activator, effector binding domain BF27_4572 SM00382 ATPases associated with a variety of cellular activities BF27_4574 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_4575 SM00382 ATPases associated with a variety of cellular activities BF27_4580 SM00889 Elongation factor G, domain IV BF27_4581 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_459 SM01240 BF27_459 BF27_4592 SM01060 BF27_4592 BF27_460 SM00316 Ribosomal protein S1-like RNA-binding domain BF27_4611 SM00850 LytTr DNA-binding domain BF27_4616 SM00530 Helix-turn-helix XRE-family like proteins BF27_4618 SM00098 Alkaline phosphatase homologues BF27_4622 SM00346 helix_turn_helix isocitrate lyase regulation BF27_4625 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BF27_4629 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_463 SM00870 BF27_463 BF27_4635 SM01133 BF27_4635 BF27_4639 SM00382 ATPases associated with a variety of cellular activities BF27_465 SM00644 BF27_465 BF27_4650 SM00287 Bacterial SH3 domain homologues BF27_4657 SM00830 Chorismate mutase type II BF27_4667 SM00382 ATPases associated with a variety of cellular activities BF27_468 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF27_4685 SM00028 Tetratricopeptide repeats BF27_4691 SM00382 ATPases associated with a variety of cellular activities BF27_4692 SM00062 Bacterial periplasmic substrate-binding proteins BF27_470 SM00422 helix_turn_helix, mercury resistance BF27_4703 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_4704 SM00382 ATPases associated with a variety of cellular activities BF27_472 SM00257 Lysin motif BF27_474 SM00487 DEAD-like helicases superfamily BF27_474 SM00490 helicase superfamily c-terminal domain BF27_4742 SM00448 cheY-homologous receiver domain BF27_4742 SM00862 Transcriptional regulatory protein, C terminal BF27_4743 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_4743 SM00387 Histidine kinase-like ATPases BF27_4743 SM00388 His Kinase A (phosphoacceptor) domain BF27_4744 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BF27_4751 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BF27_4765 SM00091 PAS domain BF27_4765 SM00382 ATPases associated with a variety of cellular activities BF27_4769 SM01130 BF27_4769 BF27_4775 SM01131 BF27_4775 BF27_4783 SM00341 Helicase and RNase D C-terminal BF27_4783 SM00487 DEAD-like helicases superfamily BF27_4783 SM00490 helicase superfamily c-terminal domain BF27_4783 SM00956 BF27_4783 BF27_479 SM00257 Lysin motif BF27_4798 SM00849 Metallo-beta-lactamase superfamily BF27_4807 SM00060 Fibronectin type 3 domain BF27_4807 SM00495 Chitin-binding domain type 3 BF27_481 SM00091 PAS domain BF27_481 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_481 SM00387 Histidine kinase-like ATPases BF27_481 SM00388 His Kinase A (phosphoacceptor) domain BF27_4814 SM00116 Domain in cystathionine beta-synthase and other proteins. BF27_4814 SM00382 ATPases associated with a variety of cellular activities BF27_482 SM00448 cheY-homologous receiver domain BF27_482 SM00862 Transcriptional regulatory protein, C terminal BF27_4825 SM00861 Transketolase, pyrimidine binding domain BF27_4836 SM00420 helix_turn_helix, Deoxyribose operon repressor BF27_4836 SM01134 BF27_4836 BF27_4840 SM00382 ATPases associated with a variety of cellular activities BF27_486 SM00363 S4 RNA-binding domain BF27_4863 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_4867 SM00871 Bacterial transcription activator, effector binding domain BF27_4871 SM00642 Alpha-amylase domain BF27_4891 SM00465 GIY-YIG type nucleases (URI domain) BF27_4913 SM00480 DNA polymerase III beta subunit BF27_4924 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_4933 SM00422 helix_turn_helix, mercury resistance BF27_4946 SM00740 BF27_4946 BF27_4947 SM00829 Enoylreductase BF27_4950 SM00387 Histidine kinase-like ATPases BF27_4950 SM00388 His Kinase A (phosphoacceptor) domain BF27_4953 SM00382 ATPases associated with a variety of cellular activities BF27_4958 SM00091 PAS domain BF27_4958 SM00387 Histidine kinase-like ATPases BF27_4958 SM00388 His Kinase A (phosphoacceptor) domain BF27_497 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_497 SM00387 Histidine kinase-like ATPases BF27_497 SM00388 His Kinase A (phosphoacceptor) domain BF27_4984 SM01209 BF27_4984 BF27_4985 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_4991 SM00382 ATPases associated with a variety of cellular activities BF27_4994 SM00382 ATPases associated with a variety of cellular activities BF27_4996 SM00387 Histidine kinase-like ATPases BF27_4998 SM00448 cheY-homologous receiver domain BF27_4998 SM00862 Transcriptional regulatory protein, C terminal BF27_5008 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_501 SM00091 PAS domain BF27_501 SM00387 Histidine kinase-like ATPases BF27_501 SM00388 His Kinase A (phosphoacceptor) domain BF27_5011 SM00342 helix_turn_helix, arabinose operon control protein BF27_5017 SM00422 helix_turn_helix, mercury resistance BF27_5017 SM00871 Bacterial transcription activator, effector binding domain BF27_5021 SM00382 ATPases associated with a variety of cellular activities BF27_5033 SM00448 cheY-homologous receiver domain BF27_5033 SM00862 Transcriptional regulatory protein, C terminal BF27_5034 SM00387 Histidine kinase-like ATPases BF27_5034 SM00388 His Kinase A (phosphoacceptor) domain BF27_5046 SM00878 Biotin carboxylase C-terminal domain BF27_5052 SM00382 ATPases associated with a variety of cellular activities BF27_5055 SM00450 Rhodanese Homology Domain BF27_5055 SM00849 Metallo-beta-lactamase superfamily BF27_5057 SM00860 SMI1 / KNR4 family BF27_5059 SM00052 Putative diguanylate phosphodiesterase BF27_5059 SM00091 PAS domain BF27_5059 SM00267 diguanylate cyclase BF27_5061 SM00382 ATPases associated with a variety of cellular activities BF27_5065 SM00646 BF27_5065 BF27_5070 SM00530 Helix-turn-helix XRE-family like proteins BF27_5084 SM00354 helix_turn _helix lactose operon repressor BF27_5100 SM00855 Phosphoglycerate mutase family BF27_5101 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_5106 SM00382 ATPases associated with a variety of cellular activities BF27_5111 SM00487 DEAD-like helicases superfamily BF27_5111 SM00490 helicase superfamily c-terminal domain BF27_5114 SM00849 Metallo-beta-lactamase superfamily BF27_5119 SM01207 BF27_5119 BF27_5135 SM00530 Helix-turn-helix XRE-family like proteins BF27_5137 SM00646 BF27_5137 BF27_5139 SM00382 ATPases associated with a variety of cellular activities BF27_5140 SM00382 ATPases associated with a variety of cellular activities BF27_5147 SM00859 Semialdehyde dehydrogenase, NAD binding domain BF27_5160 SM00357 Cold shock protein domain BF27_5168 SM00530 Helix-turn-helix XRE-family like proteins BF27_5173 SM01059 Chloramphenicol acetyltransferase BF27_5177 SM00849 Metallo-beta-lactamase superfamily BF27_5183 SM00849 Metallo-beta-lactamase superfamily BF27_519 SM00421 helix_turn_helix, Lux Regulon BF27_519 SM00448 cheY-homologous receiver domain BF27_5194 SM00382 ATPases associated with a variety of cellular activities BF27_5195 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BF27_5196 SM00363 S4 RNA-binding domain BF27_520 SM00387 Histidine kinase-like ATPases BF27_5204 SM00411 bacterial (prokaryotic) histone like domain BF27_5208 SM00923 MbtH-like protein BF27_5209 SM00823 Phosphopantetheine attachment site BF27_5209 SM00824 Thioesterase BF27_5216 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_5244 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BF27_5255 SM00530 Helix-turn-helix XRE-family like proteins BF27_5260 SM00860 SMI1 / KNR4 family BF27_5262 SM00014 Acid phosphatase homologues BF27_5265 SM00219 Tyrosine kinase, catalytic domain BF27_5273 SM00382 ATPases associated with a variety of cellular activities BF27_5276 SM00882 Coenzyme A transferase BF27_5277 SM00882 Coenzyme A transferase BF27_5280 SM00387 Histidine kinase-like ATPases BF27_5280 SM00388 His Kinase A (phosphoacceptor) domain BF27_5283 SM01091 Transporter associated domain BF27_5291 SM00382 ATPases associated with a variety of cellular activities BF27_5304 SM00829 Enoylreductase BF27_5307 SM00421 helix_turn_helix, Lux Regulon BF27_5307 SM00448 cheY-homologous receiver domain BF27_5308 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BF27_5330 SM00563 Phosphate acyltransferases BF27_5342 SM00382 ATPases associated with a variety of cellular activities BF27_5358 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_5358 SM00387 Histidine kinase-like ATPases BF27_5358 SM00388 His Kinase A (phosphoacceptor) domain BF27_5359 SM00448 cheY-homologous receiver domain BF27_5359 SM00862 Transcriptional regulatory protein, C terminal BF27_5369 SM00857 Resolvase, N terminal domain BF27_5376 SM00028 Tetratricopeptide repeats BF27_5378 SM00382 ATPases associated with a variety of cellular activities BF27_5381 SM00327 von Willebrand factor (vWF) type A domain BF27_5387 SM00028 Tetratricopeptide repeats BF27_5388 SM00028 Tetratricopeptide repeats BF27_5392 SM00836 DALR anticodon binding domain BF27_5392 SM01016 Arginyl tRNA synthetase N terminal dom BF27_5396 SM00567 E-Z type HEAT repeats BF27_5396 SM00932 Scaffold protein Nfu/NifU N terminal BF27_5403 SM00382 ATPases associated with a variety of cellular activities BF27_5404 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF27_5415 SM00894 Excalibur calcium-binding domain BF27_5428 SM00852 Probable molybdopterin binding domain BF27_5430 SM00729 Elongator protein 3, MiaB family, Radical SAM BF27_5431 SM00100 Cyclic nucleotide-monophosphate binding domain BF27_5431 SM00419 helix_turn_helix, cAMP Regulatory protein BF27_5433 SM00382 ATPases associated with a variety of cellular activities BF27_5434 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_5438 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BF27_5443 SM00460 Transglutaminase/protease-like homologues BF27_5446 SM00849 Metallo-beta-lactamase superfamily BF27_5450 SM00829 Enoylreductase BF27_5454 SM00487 DEAD-like helicases superfamily BF27_5454 SM00490 helicase superfamily c-terminal domain BF27_5477 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_5483 SM01005 Alanine racemase, C-terminal domain BF27_5486 SM00855 Phosphoglycerate mutase family BF27_5487 SM00244 prohibitin homologues BF27_5502 SM01091 Transporter associated domain BF27_5507 SM00155 Phospholipase D. Active site motifs. BF27_5517 SM00855 Phosphoglycerate mutase family BF27_5538 SM00833 Cobalamin synthesis protein cobW C-terminal domain BF27_5550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF27_5550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_5557 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_5559 SM00966 SpoVT / AbrB like domain BF27_556 SM01329 BF27_556 BF27_5564 SM00460 Transglutaminase/protease-like homologues BF27_557 SM00917 LeuA allosteric (dimerisation) domain BF27_5582 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_5582 SM00387 Histidine kinase-like ATPases BF27_5582 SM00388 His Kinase A (phosphoacceptor) domain BF27_5583 SM00448 cheY-homologous receiver domain BF27_5583 SM00862 Transcriptional regulatory protein, C terminal BF27_5598 SM00387 Histidine kinase-like ATPases BF27_5598 SM00388 His Kinase A (phosphoacceptor) domain BF27_5599 SM00448 cheY-homologous receiver domain BF27_5599 SM00862 Transcriptional regulatory protein, C terminal BF27_5600 SM00382 ATPases associated with a variety of cellular activities BF27_5602 SM00287 Bacterial SH3 domain homologues BF27_5608 SM00382 ATPases associated with a variety of cellular activities BF27_5609 SM00382 ATPases associated with a variety of cellular activities BF27_5613 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_5620 SM00382 ATPases associated with a variety of cellular activities BF27_5621 SM00382 ATPases associated with a variety of cellular activities BF27_5628 SM00833 Cobalamin synthesis protein cobW C-terminal domain BF27_5648 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BF27_5648 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BF27_5648 SM00493 BF27_5648 BF27_5650 SM00287 Bacterial SH3 domain homologues BF27_5652 SM01011 Aminopeptidase P, N-terminal domain BF27_5658 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BF27_5660 SM01133 BF27_5660 BF27_5693 SM00530 Helix-turn-helix XRE-family like proteins BF27_5700 SM00864 Tubulin/FtsZ family, GTPase domain BF27_571 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_5748 SM00725 NEAr Transporter domain BF27_5753 SM00014 Acid phosphatase homologues BF27_5780 SM00857 Resolvase, N terminal domain BF27_5785 SM00758 BF27_5785 BF27_5786 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_5806 SM00860 SMI1 / KNR4 family BF27_5815 SM00954 Region found in RelA / SpoT proteins BF27_5821 SM00028 Tetratricopeptide repeats BF27_5824 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_5828 SM00318 Staphylococcal nuclease homologues BF27_5830 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BF27_5830 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BF27_5830 SM00493 BF27_5830 BF27_5843 SM00507 HNH nucleases BF27_5863 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BF27_5905 SM00014 Acid phosphatase homologues BF27_5912 SM00854 Bacterial capsule synthesis protein PGA_cap BF27_5916 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BF27_5946 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BF27_5947 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BF27_5947 SM00493 BF27_5947 BF27_595 SM00344 helix_turn_helix ASNC type BF27_599 SM00382 ATPases associated with a variety of cellular activities BF27_6 SM00450 Rhodanese Homology Domain BF27_601 SM00382 ATPases associated with a variety of cellular activities BF27_602 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_605 SM00465 GIY-YIG type nucleases (URI domain) BF27_605 SM00496 Intron-encoded nuclease repeat 2 BF27_618 SM00388 His Kinase A (phosphoacceptor) domain BF27_619 SM00387 Histidine kinase-like ATPases BF27_623 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_624 SM00387 Histidine kinase-like ATPases BF27_624 SM00388 His Kinase A (phosphoacceptor) domain BF27_630 SM00365 Leucine-rich repeat, SDS22-like subfamily BF27_630 SM00369 Leucine-rich repeats, typical (most populated) subfamily BF27_633 SM00420 helix_turn_helix, Deoxyribose operon repressor BF27_633 SM01134 BF27_633 BF27_648 SM00822 BF27_648 BF27_65 SM00047 Lysozyme subfamily 2 BF27_66 SM00646 BF27_66 BF27_662 SM00345 helix_turn_helix gluconate operon transcriptional repressor BF27_662 SM00895 BF27_662 BF27_663 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_663 SM00387 Histidine kinase-like ATPases BF27_663 SM00388 His Kinase A (phosphoacceptor) domain BF27_664 SM00448 cheY-homologous receiver domain BF27_664 SM00862 Transcriptional regulatory protein, C terminal BF27_674 SM00014 Acid phosphatase homologues BF27_678 SM00382 ATPases associated with a variety of cellular activities BF27_682 SM00530 Helix-turn-helix XRE-family like proteins BF27_700 SM00530 Helix-turn-helix XRE-family like proteins BF27_701 SM00861 Transketolase, pyrimidine binding domain BF27_724 SM00635 Bacterial Ig-like domain 2 BF27_755 SM00954 Region found in RelA / SpoT proteins BF27_757 SM01118 BF27_757 BF27_764 SM00155 Phospholipase D. Active site motifs. BF27_77 SM00487 DEAD-like helicases superfamily BF27_77 SM00490 helicase superfamily c-terminal domain BF27_771 SM00382 ATPases associated with a variety of cellular activities BF27_772 SM00382 ATPases associated with a variety of cellular activities BF27_78 SM00448 cheY-homologous receiver domain BF27_780 SM00825 Beta-ketoacyl synthase BF27_786 SM00382 ATPases associated with a variety of cellular activities BF27_786 SM01086 C-terminal, D2-small domain, of ClpB protein BF27_79 SM00387 Histidine kinase-like ATPases BF27_795 SM00316 Ribosomal protein S1-like RNA-binding domain BF27_797 SM00530 Helix-turn-helix XRE-family like proteins BF27_798 SM00642 Alpha-amylase domain BF27_80 SM00919 Malic enzyme, NAD binding domain BF27_80 SM01274 BF27_80 BF27_800 SM01060 BF27_800 BF27_823 SM00357 Cold shock protein domain BF27_831 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BF27_831 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_837 SM00448 cheY-homologous receiver domain BF27_837 SM00862 Transcriptional regulatory protein, C terminal BF27_838 SM00387 Histidine kinase-like ATPases BF27_838 SM00388 His Kinase A (phosphoacceptor) domain BF27_84 SM00155 Phospholipase D. Active site motifs. BF27_840 SM00342 helix_turn_helix, arabinose operon control protein BF27_840 SM00871 Bacterial transcription activator, effector binding domain BF27_843 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF27_854 SM00725 NEAr Transporter domain BF27_859 SM00849 Metallo-beta-lactamase superfamily BF27_861 SM00354 helix_turn _helix lactose operon repressor BF27_87 SM00382 ATPases associated with a variety of cellular activities BF27_883 SM00422 helix_turn_helix, mercury resistance BF27_896 SM00382 ATPases associated with a variety of cellular activities BF27_899 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_9 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BF27_9 SM00387 Histidine kinase-like ATPases BF27_9 SM00388 His Kinase A (phosphoacceptor) domain BF27_908 SM00347 helix_turn_helix multiple antibiotic resistance protein BF27_919 SM00530 Helix-turn-helix XRE-family like proteins BF27_924 SM00028 Tetratricopeptide repeats BF27_929 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF27_937 SM00829 Enoylreductase BF27_944 SM00387 Histidine kinase-like ATPases BF27_944 SM00388 His Kinase A (phosphoacceptor) domain BF27_944 SM00448 cheY-homologous receiver domain BF27_945 SM00138 Methyltransferase, chemotaxis proteins BF27_946 SM00331 Sigma factor PP2C-like phosphatases BF27_946 SM00448 cheY-homologous receiver domain BF27_958 SM00460 Transglutaminase/protease-like homologues BF27_963 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BF27_97 SM00530 Helix-turn-helix XRE-family like proteins BF27_970 SM01120 BF27_970 BF27_977 SM00347 helix_turn_helix multiple antibiotic resistance protein