locus-tag	class	description
OM984_00010	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
OM984_00015	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
OM984_00025	COG1335	isochorismatase
OM984_00030	COG1522	sequence-specific DNA binding
OM984_00035	COG0531	amino acid
OM984_00055	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
OM984_00075	COG1595	DNA-templated transcription, initiation
OM984_00090	COG0662	Cupin 2, conserved barrel domain protein
OM984_00095	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM984_00095	COG2207	Transcriptional regulator
OM984_00145	COG0477	Major facilitator Superfamily
OM984_00155	COG1846	Transcriptional regulator
OM984_00160	COG2814	Major facilitator Superfamily
OM984_00170	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
OM984_00175	COG1131	(ABC) transporter
OM984_00195	COG2076	Multidrug Resistance protein
OM984_00200	COG1309	transcriptional regulator
OM984_00210	COG2031	fatty acid transporter
OM984_00220	COG2249	NAD(P)H dehydrogenase (quinone) activity
OM984_00250	COG1122	ATPase activity
OM984_00255	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
OM984_00270	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
OM984_00275	COG1288	antiporter activity
OM984_00280	COG2356	endonuclease I
OM984_00295	COG3620	sequence-specific DNA binding
OM984_00300	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
OM984_00305	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
OM984_00310	COG0124	histidyl-tRNA synthetase
OM984_00325	COG1733	regulation of RNA biosynthetic process
OM984_00330	COG0778	Nitroreductase
OM984_00350	COG1028	Short-chain dehydrogenase reductase Sdr
OM984_00360	COG1131	(ABC) transporter
OM984_00385	COG1011	Hydrolase
OM984_00395	COG2365	Tyrosine phosphatase family
OM984_00420	COG0346	lactoylglutathione lyase activity
OM984_00425	COG1940	carbohydrate kinase activity
OM984_00430	COG0738	Major facilitator superfamily
OM984_00435	COG0110	maltose O-acetyltransferase activity
OM984_00445	COG0577	efflux transmembrane transporter activity
OM984_00445	COG1136	(ABC) transporter
OM984_00460	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
OM984_00465	COG0628	permease
OM984_00485	COG2226	methyltransferase
OM984_00495	COG0477	Major facilitator Superfamily
OM984_00525	COG1253	flavin adenine dinucleotide binding
OM984_00530	COG0789	Transcriptional regulator
OM984_00535	COG0697	spore germination
OM984_00540	COG1357	PFAM Pentapeptide repeats (8 copies)
OM984_00545	COG3813	Protein conserved in bacteria
OM984_00550	COG2706	6-phosphogluconolactonase activity
OM984_00555	COG1070	Carbohydrate kinase
OM984_00565	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
OM984_00570	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
OM984_00580	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
OM984_00585	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
OM984_00590	COG0604	alcohol dehydrogenase
OM984_00595	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OM984_00605	COG3321	synthase
OM984_00605	COG0604	alcohol dehydrogenase
OM984_00610	COG1028	Short-chain dehydrogenase reductase Sdr
OM984_00635	COG0656	L-ascorbic acid biosynthetic process
OM984_00640	COG2814	Major facilitator Superfamily
OM984_00655	COG0346	lactoylglutathione lyase activity
OM984_00660	COG0814	amino acid
OM984_00685	COG1393	Belongs to the ArsC family
OM984_00690	COG1733	regulation of RNA biosynthetic process
OM984_00695	COG2188	Transcriptional regulator
OM984_00705	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
OM984_00710	COG1733	regulation of RNA biosynthetic process
OM984_00715	COG1733	regulation of RNA biosynthetic process
OM984_00730	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM984_00750	COG0384	phenazine biosynthesis protein PhzF
OM984_00760	COG1028	Short-chain dehydrogenase reductase Sdr
OM984_00770	COG0318	PFAM AMP-dependent synthetase and ligase
OM984_00780	COG1733	regulation of RNA biosynthetic process
OM984_00810	COG1191	sigma factor activity
OM984_00825	COG1309	transcriptional regulator
OM984_00845	COG3152	Membrane
OM984_00870	COG1151	hydroxylamine reductase activity
OM984_00880	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM984_00885	COG3409	Peptidoglycan-binding domain 1 protein
OM984_00885	COG3757	hydrolase, family 25
OM984_00920	COG2072	flavoprotein involved in K transport
OM984_00960	COG1113	amino acid transport
OM984_00965	COG2814	Major facilitator Superfamily
OM984_00995	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
OM984_01000	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
OM984_01025	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM984_01030	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM984_01035	COG3739	integral membrane protein
OM984_01040	COG0384	phenazine biosynthesis protein PhzF
OM984_01070	COG0583	DNA-binding transcription factor activity
OM984_01090	COG1193	negative regulation of DNA recombination
OM984_01110	COG1164	Oligoendopeptidase f
OM984_01115	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OM984_01145	COG0584	glycerophosphoryl diester phosphodiesterase
OM984_01170	COG0640	Transcriptional regulator
OM984_01175	COG0604	alcohol dehydrogenase
OM984_01195	COG2808	Putative FMN-binding domain
OM984_01200	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
OM984_01210	COG0385	Bile acid
OM984_01215	COG0277	FAD linked oxidase domain protein
OM984_01245	COG1216	Glycosyl transferase, family 2
OM984_01250	COG1024	Enoyl-CoA hydratase
OM984_01260	COG1285	pathogenesis
OM984_01275	COG2514	catechol 2,3-dioxygenase activity
OM984_01280	COG2720	vancomycin resistance protein
OM984_01320	COG0716	FMN binding
OM984_01350	COG1028	Short-chain dehydrogenase reductase Sdr
OM984_01360	COG0165	Argininosuccinate lyase
OM984_01375	COG4145	pantothenate transmembrane transporter activity
OM984_01385	COG1012	belongs to the aldehyde dehydrogenase family
OM984_01390	COG1028	Short-chain dehydrogenase reductase Sdr
OM984_01400	COG1657	PFAM Prenyltransferase squalene oxidase
OM984_01405	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
OM984_01410	COG2962	Rard protein
OM984_01415	COG3326	Membrane
OM984_01430	COG0489	protein tyrosine kinase activity
OM984_01440	COG0314	molybdopterin synthase activity
OM984_01445	COG0303	'Molybdopterin
OM984_01450	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OM984_01455	COG2116	formate transmembrane transporter activity
OM984_01465	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
OM984_01470	COG5609	conserved protein (DUF2294)
OM984_01475	COG2427	Protein of unknown function (DUF1641)
OM984_01480	COG3383	formate dehydrogenase (NAD+) activity
OM984_01490	COG0697	spore germination
OM984_01530	COG2226	methyltransferase
OM984_01535	COG4166	transmembrane transport
OM984_01540	COG4166	transmembrane transport
OM984_01545	COG4166	transmembrane transport
OM984_01550	COG1301	dicarboxylic acid transport
OM984_01555	COG1316	TRANSCRIPTIONal
OM984_01565	COG1595	DNA-templated transcription, initiation
OM984_01580	COG1131	(ABC) transporter
OM984_01590	COG0673	inositol 2-dehydrogenase activity
OM984_01595	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
OM984_01600	COG0187	DNA topoisomerase II activity
OM984_01605	COG1832	CoA-binding protein
OM984_01610	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OM984_01615	COG0745	RESPONSE REGULATOR receiver
OM984_01630	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
OM984_01635	COG4841	protein insertion into membrane
OM984_01640	COG0824	Thioesterase
OM984_01670	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OM984_01680	COG2274	protein secretion by the type I secretion system
OM984_01685	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
OM984_01725	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
OM984_01740	COG0183	Belongs to the thiolase family
OM984_01745	COG0318	PFAM AMP-dependent synthetase and ligase
OM984_01750	COG1268	BioY protein
OM984_01755	COG0318	PFAM AMP-dependent synthetase and ligase
OM984_01805	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM984_01815	COG5002	protein histidine kinase activity
OM984_01820	COG0400	carboxylic ester hydrolase activity
OM984_01825	COG0346	lactoylglutathione lyase activity
OM984_01830	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OM984_01835	COG0069	glutamate synthase activity
OM984_01840	COG1902	pentaerythritol trinitrate reductase activity
OM984_01845	COG1329	Transcriptional regulator
OM984_01850	COG0010	Belongs to the arginase family
OM984_01875	COG2226	methyltransferase
OM984_01910	COG4846	Membrane protein involved in cytochrome C biogenesis
OM984_01915	COG0785	Cytochrome C biogenesis protein
OM984_01925	COG0583	DNA-binding transcription factor activity
OM984_01930	COG1380	Effector of murein hydrolase LrgA
OM984_01935	COG1346	cytolysis
OM984_01960	COG3409	Peptidoglycan-binding domain 1 protein
OM984_01960	COG5632	N-Acetylmuramoyl-L-alanine amidase
OM984_01975	COG1132	(ABC) transporter
OM984_01980	COG1132	(ABC) transporter
OM984_02010	COG3639	organic phosphonate transmembrane transporter activity
OM984_02015	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
OM984_02035	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
OM984_02055	COG1695	Transcriptional regulator
OM984_02100	COG1388	LysM domain
OM984_02100	COG3409	Peptidoglycan-binding domain 1 protein
OM984_02100	COG5632	N-Acetylmuramoyl-L-alanine amidase
OM984_02105	COG4824	toxin secretion phage lysis holin
OM984_02265	COG1595	DNA-templated transcription, initiation
OM984_02310	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
OM984_02390	COG1396	sequence-specific DNA binding
OM984_02415	COG0174	glutamine synthetase
OM984_02420	COG0789	Transcriptional regulator
OM984_02425	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
OM984_02435	COG2860	membrane
OM984_02440	COG0464	growth
OM984_02470	COG1388	LysM domain
OM984_02470	COG3584	3D domain protein
OM984_02475	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OM984_02475	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OM984_02475	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OM984_02480	COG1105	Belongs to the carbohydrate kinase PfkB family
OM984_02485	COG1349	DNA-binding transcription factor activity
OM984_02495	COG2322	membrane
OM984_02505	COG1113	amino acid transport
OM984_02520	COG1408	metallophosphoesterase
OM984_02525	COG2116	formate transmembrane transporter activity
OM984_02535	COG2217	Heavy metal translocating P-type atpase
OM984_02540	COG2608	mercury ion transmembrane transporter activity
OM984_02545	COG1937	Protein conserved in bacteria
OM984_02555	COG2819	hydrolase of the alpha beta superfamily
OM984_02560	COG1120	ATPase activity
OM984_02565	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM984_02570	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM984_02580	COG0708	Exodeoxyribonuclease III
OM984_02585	COG2169	Transcriptional regulator
OM984_02590	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
OM984_02595	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
OM984_02605	COG2364	Membrane
OM984_02620	COG2267	carboxylic ester hydrolase activity
OM984_02625	COG0346	lactoylglutathione lyase activity
OM984_02630	COG5001	Diguanylate cyclase
OM984_02630	COG3300	MHYT domain
OM984_02645	COG1346	cytolysis
OM984_02650	COG1380	Effector of murein hydrolase LrgA
OM984_02655	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM984_02660	COG0508	dehydrogenase complex catalyzes the overall conversion of
OM984_02660	COG0596	Alpha beta hydrolase
OM984_02665	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
OM984_02685	COG1404	Belongs to the peptidase S8 family
OM984_02690	COG3773	Cell wall hydrolase
OM984_02695	COG0562	UDP-galactopyranose mutase
OM984_02700	COG1368	sulfuric ester hydrolase activity
OM984_02705	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
OM984_02715	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
OM984_02740	COG1131	(ABC) transporter
OM984_02760	COG4550	Control of competence regulator ComK, YlbF/YmcA
OM984_02765	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OM984_02770	COG1013	pyruvate-flavodoxin oxidoreductase activity
OM984_02775	COG0674	pyruvate-flavodoxin oxidoreductase activity
OM984_02775	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
OM984_02785	COG2359	stage V sporulation protein S
OM984_02790	COG1692	metallophosphoesterase
OM984_02815	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
OM984_02820	COG1426	Protein conserved in bacteria
OM984_02835	COG0300	oxidoreductase activity
OM984_02840	COG0612	Peptidase, M16
OM984_02845	COG0612	Peptidase, M16
OM984_02860	COG3845	ABC transporter
OM984_02865	COG1744	ABC transporter substrate-binding protein PnrA-like
OM984_02870	COG2188	Transcriptional regulator
OM984_02875	COG1674	ftsk spoiiie
OM984_02885	COG0740	serine-type endopeptidase activity
OM984_02890	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
OM984_02900	COG0527	aspartate kinase activity
OM984_02905	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
OM984_02910	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
OM984_02915	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
OM984_02920	COG1873	PFAM PRC-barrel domain
OM984_02925	COG0612	Peptidase, M16
OM984_02930	COG0726	polysaccharide deacetylase
OM984_02945	COG0196	riboflavin kinase activity
OM984_02950	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
OM984_02960	COG1550	Protein conserved in bacteria
OM984_02970	COG1358	cellular component organization or biogenesis
OM984_02975	COG2740	Nucleic-acid-binding protein implicated in transcription termination
OM984_02980	COG0195	Participates in both transcription termination and antitermination
OM984_03000	COG0750	zinc metalloprotease
OM984_03010	COG4589	Belongs to the CDS family
OM984_03015	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
OM984_03025	COG0528	UMP kinase activity
OM984_03055	COG4974	Belongs to the 'phage' integrase family
OM984_03065	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
OM984_03075	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
OM984_03115	COG1837	Belongs to the UPF0109 family
OM984_03125	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
OM984_03135	COG0552	protein localization to endoplasmic reticulum
OM984_03140	COG1196	nuclear chromosome segregation
OM984_03150	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OM984_03155	COG1028	Short-chain dehydrogenase reductase Sdr
OM984_03160	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
OM984_03175	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
OM984_03180	COG1461	Dihydroxyacetone kinase
OM984_03185	COG1302	Protein conserved in bacteria
OM984_03200	COG1564	THIamine pyrophosphokinase
OM984_03205	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
OM984_03210	COG1162	GTPase activity
OM984_03215	COG2815	serine threonine protein kinase
OM984_03215	COG0515	serine threonine protein kinase
OM984_03220	COG0631	protein serine/threonine phosphatase activity
OM984_03230	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
OM984_03230	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
OM984_03240	COG0242	peptide deformylase activity
OM984_03245	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
OM984_03250	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
OM984_03270	COG1561	YicC-like family, N-terminal region
OM984_03275	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
OM984_03285	COG0006	proline dipeptidase activity
OM984_03300	COG3069	C4-dicarboxylate transmembrane transporter activity
OM984_03365	COG0564	pseudouridine synthase activity
OM984_03385	COG3599	regulation of cell shape
OM984_03390	COG2302	S4 RNA-binding domain
OM984_03395	COG0762	integral membrane protein
OM984_03405	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
OM984_03410	COG1496	oxidoreductase activity
OM984_03415	COG1873	PFAM PRC-barrel domain
OM984_03420	COG1191	sigma factor activity
OM984_03425	COG1191	sigma factor activity
OM984_03435	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
OM984_03440	COG0849	cell division
OM984_03445	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
OM984_03450	COG0812	UDP-N-acetylmuramate dehydrogenase activity
OM984_03460	COG0772	Belongs to the SEDS family
OM984_03475	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
OM984_03480	COG0768	penicillin binding
OM984_03485	COG0768	penicillin binding
OM984_03490	COG4839	cell division protein FtsL
OM984_03505	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
OM984_03520	COG0333	Belongs to the bacterial ribosomal protein bL32 family
OM984_03525	COG1399	metal-binding, possibly nucleic acid-binding protein
OM984_03575	COG4824	toxin secretion phage lysis holin
OM984_03675	COG4626	Terminase
OM984_03675	COG1802	Transcriptional regulator
OM984_03700	COG0582	viral genome integration into host DNA
OM984_03765	COG0756	dUTP diphosphatase activity
OM984_03780	COG1191	sigma factor activity
OM984_03805	COG1484	DNA-dependent DNA replication
OM984_03835	COG1396	sequence-specific DNA binding
OM984_03850	COG1396	sequence-specific DNA binding
OM984_03870	COG0582	viral genome integration into host DNA
OM984_03880	COG3480	Lon protease (S16) C-terminal proteolytic domain
OM984_03885	COG1752	Esterase of the alpha-beta hydrolase superfamily
OM984_03890	COG3314	Sporulation integral membrane protein YlbJ
OM984_03900	COG0742	ribosomal rna small subunit methyltransferase
OM984_03915	COG3679	Belongs to the UPF0342 family
OM984_03920	COG0406	alpha-ribazole phosphatase activity
OM984_03935	COG2340	Cysteine-rich secretory protein family
OM984_03950	COG3336	cytochrome c oxidase
OM984_03985	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
OM984_03990	COG0772	Belongs to the SEDS family
OM984_04000	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
OM984_04005	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
OM984_04015	COG4896	Protein conserved in bacteria
OM984_04030	COG1217	gtp-binding protein TYPA
OM984_04040	COG0483	inositol monophosphate 1-phosphatase activity
OM984_04060	COG1982	Orn Lys Arg decarboxylase major
OM984_04105	COG0508	dehydrogenase complex catalyzes the overall conversion of
OM984_04110	COG0022	dehydrogenase e1 component
OM984_04115	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
OM984_04125	COG0242	peptide deformylase activity
OM984_04130	COG0561	phosphatase activity
OM984_04140	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
OM984_04145	COG0569	domain protein
OM984_04165	COG0583	DNA-binding transcription factor activity
OM984_04170	COG0517	IMP dehydrogenase activity
OM984_04180	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
OM984_04190	COG4703	Protein of unknown function (DUF1797)
OM984_04205	COG2200	EAL domain
OM984_04210	COG1028	Short-chain dehydrogenase reductase Sdr
OM984_04215	COG1408	metallophosphoesterase
OM984_04225	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
OM984_04260	COG2814	Major facilitator Superfamily
OM984_04280	COG3209	COG3209 Rhs family protein
OM984_04290	COG2205	protein histidine kinase activity
OM984_04300	COG0436	Aminotransferase
OM984_04305	COG1609	Transcriptional regulator
OM984_04310	COG3833	ABC-type maltose transport systems, permease component
OM984_04315	COG1175	transmembrane transport
OM984_04320	COG2182	Extracellular solute-binding protein
OM984_04330	COG0366	Alpha amylase catalytic
OM984_04335	COG3842	ATPase activity
OM984_04375	COG0183	Belongs to the thiolase family
OM984_04410	COG1695	Transcriptional regulator
OM984_04415	COG1028	Short-chain dehydrogenase reductase Sdr
OM984_04425	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
OM984_04435	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
OM984_04440	COG0436	Aminotransferase
OM984_04460	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
OM984_04480	COG2199	diguanylate cyclase activity
OM984_04485	COG0778	Nitroreductase
OM984_04510	COG1263	PTS System
OM984_04510	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM984_04510	COG2190	(PTS) system
OM984_04515	COG3711	transcriptional antiterminator
OM984_04525	COG2188	Transcriptional regulator
OM984_04535	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
OM984_04560	COG1547	Domain of unknown function (DUF309)
OM984_04565	COG0456	acetyltransferase
OM984_04575	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
OM984_04580	COG4086	secreted protein
OM984_04585	COG0561	phosphatase activity
OM984_04590	COG0697	spore germination
OM984_04605	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM984_04630	COG0733	neurotransmitter:sodium symporter activity
OM984_04650	COG1686	Belongs to the peptidase S11 family
OM984_04655	COG1725	Transcriptional regulator
OM984_04660	COG1131	(ABC) transporter
OM984_04675	COG1846	Transcriptional regulator
OM984_04690	COG0598	Magnesium transport protein CorA
OM984_04715	COG4974	Belongs to the 'phage' integrase family
OM984_04725	COG0735	belongs to the Fur family
OM984_04730	COG1300	Membrane
OM984_04750	COG0667	Aldo Keto reductase
OM984_04755	COG0656	L-ascorbic acid biosynthetic process
OM984_04760	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
OM984_04760	COG0456	acetyltransferase
OM984_04770	COG4085	toxin activity
OM984_04770	COG1525	nuclease
OM984_04770	COG0737	Belongs to the 5'-nucleotidase family
OM984_04780	COG0596	Alpha beta hydrolase
OM984_04785	COG2056	Na+-H+ antiporter family
OM984_04790	COG1609	Transcriptional regulator
OM984_04795	COG0456	acetyltransferase
OM984_04800	COG1073	alpha beta
OM984_04815	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OM984_04815	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OM984_04820	COG0307	riboflavin synthase, alpha
OM984_04845	COG4106	trans-aconitate 2-methyltransferase activity
OM984_04850	COG1073	alpha beta
OM984_04850	COG2226	methyltransferase
OM984_04865	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
OM984_04875	COG1757	Na H antiporter
OM984_04880	COG0737	Belongs to the 5'-nucleotidase family
OM984_04890	COG1522	sequence-specific DNA binding
OM984_04910	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
OM984_04920	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
OM984_04935	COG0300	oxidoreductase activity
OM984_04945	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
OM984_04950	COG1760	l-serine dehydratase
OM984_04955	COG1760	l-serine dehydratase
OM984_04975	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
OM984_04985	COG2195	Cleaves the N-terminal amino acid of tripeptides
OM984_04990	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM984_05005	COG1376	ErfK ybiS ycfS ynhG family protein
OM984_05010	COG4129	membrane
OM984_05015	COG1126	abc transporter atp-binding protein
OM984_05020	COG0765	amino acid transport
OM984_05025	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OM984_05040	COG2816	NAD+ diphosphatase activity
OM984_05045	COG0772	Belongs to the SEDS family
OM984_05050	COG0508	dehydrogenase complex catalyzes the overall conversion of
OM984_05055	COG0022	dehydrogenase e1 component
OM984_05060	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
OM984_05065	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OM984_05080	COG0280	phosphate acetyltransferase
OM984_05085	COG3290	protein histidine kinase activity
OM984_05085	COG3829	transcription factor binding
OM984_05095	COG0584	glycerophosphoryl diester phosphodiesterase
OM984_05100	COG3093	addiction module antidote protein HigA
OM984_05110	COG0745	RESPONSE REGULATOR receiver
OM984_05115	COG0750	zinc metalloprotease
OM984_05120	COG0497	DNA recombination
OM984_05130	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
OM984_05140	COG0142	geranyltranstransferase activity
OM984_05165	COG1302	Protein conserved in bacteria
OM984_05170	COG0439	Biotin carboxylase
OM984_05175	COG0511	ligase activity, forming carbon-carbon bonds
OM984_05220	COG3854	ATPases associated with a variety of cellular activities
OM984_05245	COG0006	proline dipeptidase activity
OM984_05260	COG3872	metal-dependent enzyme
OM984_05270	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
OM984_05290	COG0095	Lipoate-protein ligase
OM984_05295	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OM984_05300	COG1609	Transcriptional regulator
OM984_05310	COG2076	Multidrug Resistance protein
OM984_05315	COG2076	Multidrug Resistance protein
OM984_05350	COG1131	(ABC) transporter
OM984_05355	COG1725	Transcriptional regulator
OM984_05385	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OM984_05445	COG4970	Tfp pilus assembly protein FimT
OM984_05455	COG1459	type II secretion system
OM984_05460	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
OM984_05510	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
OM984_05515	COG1410	methionine synthase
OM984_05515	COG0646	methionine synthase
OM984_05520	COG0646	methionine synthase
OM984_05520	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
OM984_05525	COG0626	cystathionine gamma-synthase activity
OM984_05530	COG0626	cystathionine gamma-synthase activity
OM984_05550	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM984_05560	COG1940	carbohydrate kinase activity
OM984_05565	COG4483	Protein conserved in bacteria
OM984_05570	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
OM984_05575	COG0267	Belongs to the bacterial ribosomal protein bL33 family
OM984_05580	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
OM984_05585	COG0704	Plays a role in the regulation of phosphate uptake
OM984_05595	COG0581	inorganic phosphate transmembrane transporter activity
OM984_05600	COG0573	inorganic phosphate transmembrane transporter activity
OM984_05605	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
OM984_05610	COG0768	penicillin binding
OM984_05615	COG0477	Major facilitator Superfamily
OM984_05620	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
OM984_05645	COG0735	belongs to the Fur family
OM984_05650	COG1108	ABC-type Mn2 Zn2 transport systems permease components
OM984_05655	COG1121	(ABC) transporter
OM984_05660	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM984_05690	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
OM984_05695	COG2384	SAM-dependent methyltransferase
OM984_05700	COG2010	Cytochrome c
OM984_05705	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OM984_05710	COG0358	DNA primase activity
OM984_05720	COG0517	IMP dehydrogenase activity
OM984_05735	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
OM984_05740	COG0295	cytidine deaminase activity
OM984_05745	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
OM984_05755	COG1480	7TM receptor with intracellular HD hydrolase
OM984_05760	COG1702	phosphate starvation-inducible protein PhoH
OM984_05775	COG1610	YqeY-like protein
OM984_05780	COG0828	Belongs to the bacterial ribosomal protein bS21 family
OM984_05785	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OM984_05790	COG1385	rRNA (uridine-N3-)-methyltransferase activity
OM984_05820	COG0635	Involved in the biosynthesis of porphyrin-containing compound
OM984_05825	COG1733	regulation of RNA biosynthetic process
OM984_05850	COG1466	dna polymerase III delta subunit
OM984_05860	COG2333	competence protein COMEC
OM984_05860	COG0658	competence protein
OM984_05865	COG2131	deaminase
OM984_05870	COG1596	polysaccharide export
OM984_05870	COG1555	photosystem II stabilization
OM984_05875	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
OM984_05880	COG2226	methyltransferase
OM984_05885	COG0799	negative regulation of ribosome biogenesis
OM984_05890	COG1713	HD superfamily hydrolase involved in NAD metabolism
OM984_05900	COG1534	Rna-binding protein
OM984_05910	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
OM984_05915	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
OM984_05940	COG1595	DNA-templated transcription, initiation
OM984_05950	COG0778	Nitroreductase
OM984_05955	COG2357	RelA SpoT domain protein
OM984_05965	COG1785	Belongs to the alkaline phosphatase family
OM984_05975	COG2267	carboxylic ester hydrolase activity
OM984_06010	COG1404	Belongs to the peptidase S8 family
OM984_06015	COG3186	Phenylalanine-4-hydroxylase
OM984_06030	COG2259	Doxx family
OM984_06070	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM984_06080	COG1454	alcohol dehydrogenase
OM984_06080	COG1012	belongs to the aldehyde dehydrogenase family
OM984_06085	COG0626	cystathionine gamma-synthase activity
OM984_06090	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
OM984_06115	COG0768	penicillin binding
OM984_06130	COG0826	peptidase U32
OM984_06135	COG0826	peptidase U32
OM984_06140	COG4122	O-methyltransferase activity
OM984_06145	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
OM984_06165	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
OM984_06175	COG0628	permease
OM984_06195	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
OM984_06205	COG0482	sulfurtransferase activity
OM984_06210	COG1104	cysteine desulfurase activity
OM984_06215	COG1959	2 iron, 2 sulfur cluster binding
OM984_06220	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
OM984_06230	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
OM984_06255	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
OM984_06265	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
OM984_06265	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
OM984_06270	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
OM984_06275	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OM984_06275	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OM984_06285	COG2244	polysaccharide biosynthetic process
OM984_06290	COG2323	membrane
OM984_06300	COG1862	Preprotein translocase
OM984_06330	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
OM984_06340	COG0697	spore germination
OM984_06345	COG0697	spore germination
OM984_06350	COG0640	Transcriptional regulator
OM984_06375	COG0157	Belongs to the NadC ModD family
OM984_06380	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
OM984_06385	COG1104	cysteine desulfurase activity
OM984_06390	COG1827	regulation of RNA biosynthetic process
OM984_06395	COG2258	MOSC domain
OM984_06400	COG0077	Prephenate dehydratase
OM984_06405	COG0577	efflux transmembrane transporter activity
OM984_06410	COG0577	efflux transmembrane transporter activity
OM984_06415	COG1136	(ABC) transporter
OM984_06425	COG0745	RESPONSE REGULATOR receiver
OM984_06430	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
OM984_06435	COG3290	protein histidine kinase activity
OM984_06445	COG2868	ribosomal protein
OM984_06455	COG1530	ribonuclease E activity
OM984_06460	COG1994	Peptidase M50
OM984_06465	COG0739	heme binding
OM984_06470	COG2894	cell division
OM984_06490	COG1077	Cell shape determining protein MreB Mrl
OM984_06510	COG0285	dihydrofolate synthase activity
OM984_06515	COG0525	valine-tRNA ligase activity
OM984_06525	COG1388	LysM domain
OM984_06535	COG0113	porphobilinogen synthase activity
OM984_06540	COG1587	Uroporphyrinogen-III synthase
OM984_06550	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
OM984_06560	COG1846	Transcriptional regulator
OM984_06565	COG1764	response to oxidative stress
OM984_06580	COG0470	DNA polymerase III
OM984_06580	COG1067	ATP-dependent peptidase activity
OM984_06625	COG0622	Phosphoesterase
OM984_06640	COG5401	PFAM Sporulation and spore germination
OM984_06660	COG1309	transcriptional regulator
OM984_06675	COG2197	response regulator
OM984_06680	COG2233	PERMEase
OM984_06690	COG0402	S-adenosylhomocysteine deaminase activity
OM984_06695	COG0402	S-adenosylhomocysteine deaminase activity
OM984_06705	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OM984_06715	COG0444	Belongs to the ABC transporter superfamily
OM984_06720	COG4608	Belongs to the ABC transporter superfamily
OM984_06725	COG3275	phosphorelay sensor kinase activity
OM984_06730	COG3279	Response regulator of the LytR AlgR family
OM984_06745	COG1983	PspC domain protein
OM984_06750	COG1396	sequence-specific DNA binding
OM984_06755	COG0697	spore germination
OM984_06765	COG1959	2 iron, 2 sulfur cluster binding
OM984_06770	COG1668	transmembrane transport
OM984_06775	COG4152	abc transporter atp-binding protein
OM984_06780	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
OM984_06790	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
OM984_06795	COG1876	peptidase activity
OM984_06800	COG0824	Thioesterase
OM984_06805	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
OM984_06810	COG1053	succinate dehydrogenase
OM984_06815	COG2009	succinate dehydrogenase
OM984_06820	COG1719	4-vinyl reductase, 4VR
OM984_06830	COG3118	belongs to the thioredoxin family
OM984_06835	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
OM984_06840	COG2086	electron transfer activity
OM984_06845	COG1024	Enoyl-CoA hydratase
OM984_06855	COG0318	PFAM AMP-dependent synthetase and ligase
OM984_06875	COG2318	DinB family
OM984_06905	COG1131	(ABC) transporter
OM984_06910	COG2205	protein histidine kinase activity
OM984_06915	COG0745	RESPONSE REGULATOR receiver
OM984_06925	COG4895	conserved protein (DUF2196)
OM984_06930	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
OM984_06945	COG4509	Sortase family
OM984_06950	COG1120	ATPase activity
OM984_06965	COG5386	Cell surface protein
OM984_06975	COG5386	Cell surface protein
OM984_06980	COG1114	Component of the transport system for branched-chain amino acids
OM984_06985	COG1187	pseudouridine synthase activity
OM984_06995	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
OM984_06995	COG1796	DNA polymerase
OM984_07000	COG1286	toxin biosynthetic process
OM984_07045	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OM984_07055	COG1418	mRNA catabolic process
OM984_07080	COG2814	Major facilitator Superfamily
OM984_07085	COG1566	PFAM secretion protein HlyD family protein
OM984_07090	COG1309	transcriptional regulator
OM984_07095	COG1363	Peptidase, m42
OM984_07120	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
OM984_07130	COG1484	DNA-dependent DNA replication
OM984_07135	COG3611	Membrane attachment protein
OM984_07145	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
OM984_07150	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
OM984_07155	COG0237	dephospho-CoA kinase activity
OM984_07160	COG1971	Probably functions as a manganese efflux pump
OM984_07170	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OM984_07170	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OM984_07175	COG5002	protein histidine kinase activity
OM984_07180	COG0745	RESPONSE REGULATOR receiver
OM984_07205	COG0538	isocitrate dehydrogenase activity
OM984_07210	COG0372	Belongs to the citrate synthase family
OM984_07220	COG0628	permease
OM984_07225	COG3030	protein affecting phage T7 exclusion by the F plasmid
OM984_07250	COG1725	Transcriptional regulator
OM984_07255	COG0281	malic enzyme
OM984_07260	COG0587	DNA-directed DNA polymerase activity
OM984_07275	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
OM984_07295	COG4109	DRTGG domain
OM984_07310	COG0006	proline dipeptidase activity
OM984_07350	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM984_07355	COG0662	Cupin 2, conserved barrel domain protein
OM984_07365	COG1476	TRANSCRIPTIONal
OM984_07380	COG1028	Short-chain dehydrogenase reductase Sdr
OM984_07385	COG0589	response to stress
OM984_07425	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM984_07445	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
OM984_07450	COG0827	DNA restriction-modification system
OM984_07455	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
OM984_07460	COG3874	Sporulation protein YtfJ
OM984_07475	COG1574	metal-dependent hydrolase with the TIM-barrel fold
OM984_07485	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OM984_07500	COG1104	cysteine desulfurase activity
OM984_07510	COG0583	DNA-binding transcription factor activity
OM984_07515	COG0697	spore germination
OM984_07525	COG1956	GAF domain-containing protein
OM984_07530	COG0626	cystathionine gamma-synthase activity
OM984_07560	COG1595	DNA-templated transcription, initiation
OM984_07570	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OM984_07575	COG0454	-acetyltransferase
OM984_07580	COG0517	IMP dehydrogenase activity
OM984_07585	COG0123	including yeast histone deacetylase and acetoin utilization protein
OM984_07595	COG0745	RESPONSE REGULATOR receiver
OM984_07605	COG0666	response to abiotic stimulus
OM984_07640	COG1609	Transcriptional regulator
OM984_07645	COG4851	CamS sex pheromone cAM373 precursor
OM984_07650	COG3118	belongs to the thioredoxin family
OM984_07660	COG2309	aminopeptidase activity
OM984_07680	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM984_07695	COG1674	ftsk spoiiie
OM984_07705	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OM984_07710	COG4848	Belongs to the UPF0354 family
OM984_07715	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OM984_07720	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
OM984_07725	COG1363	Peptidase, m42
OM984_07735	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM984_07750	COG0510	thiamine kinase activity
OM984_07755	COG1523	belongs to the glycosyl hydrolase 13 family
OM984_07770	COG1349	DNA-binding transcription factor activity
OM984_07775	COG1187	pseudouridine synthase activity
OM984_07780	COG2244	polysaccharide biosynthetic process
OM984_07785	COG2081	HI0933 family
OM984_07790	COG2814	Major facilitator Superfamily
OM984_07800	COG3832	glyoxalase III activity
OM984_07820	COG1329	Transcriptional regulator
OM984_07830	COG4975	Glucose uptake
OM984_07845	COG0314	molybdopterin synthase activity
OM984_07850	COG1763	Mo-molybdopterin cofactor biosynthetic process
OM984_07855	COG0303	'Molybdopterin
OM984_07865	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OM984_07890	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OM984_07900	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
OM984_07940	COG2814	Major facilitator Superfamily
OM984_07945	COG0475	glutathione-regulated potassium exporter activity
OM984_07950	COG0490	domain, Protein
OM984_07955	COG0582	viral genome integration into host DNA
OM984_07965	COG1136	(ABC) transporter
OM984_07985	COG1242	4 iron, 4 sulfur cluster binding
OM984_07990	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
OM984_07995	COG1131	(ABC) transporter
OM984_08005	COG1794	racemase activity, acting on amino acids and derivatives
OM984_08025	COG2267	carboxylic ester hydrolase activity
OM984_08030	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
OM984_08035	COG0671	phosphoesterase, PA-phosphatase related
OM984_08040	COG0438	transferase activity, transferring glycosyl groups
OM984_08050	COG0521	Mo-molybdopterin cofactor biosynthetic process
OM984_08105	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
OM984_08110	COG5002	protein histidine kinase activity
OM984_08115	COG4191	Histidine kinase
OM984_08120	COG2267	carboxylic ester hydrolase activity
OM984_08140	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OM984_08145	COG1116	anion transmembrane transporter activity
OM984_08150	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OM984_08175	COG0494	nUDIX hydrolase
OM984_08210	COG0288	reversible hydration of carbon dioxide
OM984_08215	COG1271	oxidase subunit
OM984_08220	COG1294	oxidase, subunit
OM984_08240	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM984_08265	COG1842	Phage shock protein A
OM984_08295	COG5002	protein histidine kinase activity
OM984_08300	COG0745	RESPONSE REGULATOR receiver
OM984_08330	COG1597	lipid kinase activity
OM984_08365	COG0586	Pfam SNARE associated Golgi protein
OM984_08375	COG0577	efflux transmembrane transporter activity
OM984_08380	COG1136	(ABC) transporter
OM984_08385	COG3708	Transcriptional regulator
OM984_08385	COG2207	Transcriptional regulator
OM984_08390	COG0745	RESPONSE REGULATOR receiver
OM984_08395	COG2205	protein histidine kinase activity
OM984_08405	COG0577	efflux transmembrane transporter activity
OM984_08410	COG1136	(ABC) transporter
OM984_08430	COG2188	Transcriptional regulator
OM984_08450	COG3964	amidohydrolase
OM984_08480	COG4948	Mandelate Racemase Muconate Lactonizing
OM984_08490	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
OM984_08495	COG0596	Alpha beta hydrolase
OM984_08500	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
OM984_08505	COG1169	isochorismate synthase
OM984_08510	COG1575	Belongs to the MenA family. Type 1 subfamily
OM984_08515	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
OM984_08540	COG0058	SHG alpha-glucan phosphorylase activity
OM984_08545	COG0297	glycogen (starch) synthase activity
OM984_08550	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
OM984_08665	COG0544	peptidyl-prolyl cis-trans isomerase activity
OM984_08700	COG1285	pathogenesis
OM984_08705	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
OM984_08715	COG0166	Belongs to the GPI family
OM984_08720	COG2155	Conserved Protein
OM984_08725	COG1098	S1 RNA binding domain
OM984_08730	COG0436	Aminotransferase
OM984_08735	COG1522	sequence-specific DNA binding
OM984_08740	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
OM984_08745	COG2267	carboxylic ester hydrolase activity
OM984_08755	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
OM984_08775	COG5018	Exonuclease
OM984_08780	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
OM984_08800	COG2050	protein possibly involved in aromatic compounds catabolism
OM984_08810	COG1268	BioY protein
OM984_08820	COG1210	Utp--glucose-1-phosphate uridylyltransferase
OM984_08825	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
OM984_08840	COG3584	3D domain protein
OM984_08855	COG1252	NADH dehydrogenase
OM984_08870	COG3708	Transcriptional regulator
OM984_08885	COG1683	Conserved Protein
OM984_08905	COG0316	Belongs to the HesB IscA family
OM984_08920	COG1252	NADH dehydrogenase
OM984_08935	COG0390	transport system, permease component
OM984_08940	COG2824	Alkylphosphonate utilization operon protein PhnA
OM984_08980	COG4837	Protein of unknown function (DUF1462)
OM984_08985	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
OM984_08995	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
OM984_09000	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
OM984_09010	COG2249	NAD(P)H dehydrogenase (quinone) activity
OM984_09015	COG0647	UMP catabolic process
OM984_09025	COG2445	Protein of unknown function DUF86
OM984_09030	COG1494	fructose-1,6-bisphosphatase
OM984_09045	COG4470	Protein conserved in bacteria
OM984_09055	COG0789	Transcriptional regulator
OM984_09060	COG4377	Putative membrane peptidase family (DUF2324)
OM984_09085	COG0739	heme binding
OM984_09095	COG3377	Domain of unknown function (DUF1805)
OM984_09100	COG0737	Belongs to the 5'-nucleotidase family
OM984_09105	COG1695	Transcriptional regulator
OM984_09115	COG0719	Fe-S assembly protein
OM984_09120	COG0822	iron-sulfur transferase activity
OM984_09125	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
OM984_09130	COG0719	Fe-S assembly protein
OM984_09135	COG0396	ATPase activity
OM984_09140	COG1464	Belongs to the NlpA lipoprotein family
OM984_09145	COG1464	Belongs to the NlpA lipoprotein family
OM984_09150	COG2011	ABC-type metal ion transport system permease component
OM984_09155	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
OM984_09165	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OM984_09170	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
OM984_09180	COG1393	Belongs to the ArsC family
OM984_09225	COG0039	L-malate dehydrogenase activity
OM984_09250	COG1309	transcriptional regulator
OM984_09255	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM984_09260	COG1960	acyl-CoA dehydrogenase activity
OM984_09265	COG0183	Belongs to the thiolase family
OM984_09270	COG1024	Enoyl-CoA hydratase
OM984_09270	COG1250	3-hydroxyacyl-CoA dehydrogenase
OM984_09280	COG1686	Belongs to the peptidase S11 family
OM984_09295	COG0011	TIGRFAM Protein of
OM984_09300	COG0840	transmembrane signaling receptor activity
OM984_09320	COG2814	Major facilitator Superfamily
OM984_09325	COG0531	amino acid
OM984_09335	COG0706	membrane insertase activity
OM984_09345	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM984_09380	COG0586	Pfam SNARE associated Golgi protein
OM984_09390	COG1376	ErfK ybiS ycfS ynhG family protein
OM984_09395	COG0745	RESPONSE REGULATOR receiver
OM984_09400	COG5002	protein histidine kinase activity
OM984_09425	COG2151	metal-sulfur cluster biosynthetic enzyme
OM984_09430	COG3227	Zinc metalloprotease (Elastase)
OM984_09435	COG1741	Belongs to the pirin family
OM984_09450	COG0475	glutathione-regulated potassium exporter activity
OM984_09455	COG0490	domain, Protein
OM984_09460	COG1115	amino acid carrier protein
OM984_09465	COG0783	Belongs to the Dps family
OM984_09480	COG1611	Belongs to the LOG family
OM984_09500	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM984_09505	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM984_09510	COG1115	amino acid carrier protein
OM984_09515	COG1115	amino acid carrier protein
OM984_09520	COG2910	NAD(P)H-binding
OM984_09535	COG0656	L-ascorbic acid biosynthetic process
OM984_09540	COG2814	Major facilitator Superfamily
OM984_09545	COG1733	regulation of RNA biosynthetic process
OM984_09555	COG1252	NADH dehydrogenase
OM984_09560	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
OM984_09565	COG0812	UDP-N-acetylmuramate dehydrogenase activity
OM984_09575	COG3290	protein histidine kinase activity
OM984_09575	COG0840	transmembrane signaling receptor activity
OM984_09585	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
OM984_09590	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
OM984_09605	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM984_09660	COG0557	exoribonuclease II activity
OM984_09665	COG1647	Serine aminopeptidase, S33
OM984_09670	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
OM984_09675	COG1346	cytolysis
OM984_09775	COG4695	Portal protein
OM984_09800	COG4974	Belongs to the 'phage' integrase family
OM984_09810	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
OM984_09815	COG0149	triose-phosphate isomerase activity
OM984_09825	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
OM984_09840	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
OM984_09865	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM984_09880	COG2323	membrane
OM984_09885	COG0740	serine-type endopeptidase activity
OM984_09890	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
OM984_09900	COG0391	Required for morphogenesis under gluconeogenic growth conditions
OM984_09910	COG1051	belongs to the nudix hydrolase family
OM984_09920	COG0492	ferredoxin-NADP+ reductase activity
OM984_09925	COG0457	Tetratricopeptide repeat
OM984_09930	COG0110	maltose O-acetyltransferase activity
OM984_09950	COG1950	PFAM Membrane protein of
OM984_09960	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OM984_09965	COG0556	nucleotide-excision repair
OM984_09985	COG0789	Transcriptional regulator
OM984_10010	COG2855	membrane
OM984_10015	COG0583	DNA-binding transcription factor activity
OM984_10025	COG0655	NAD(P)H dehydrogenase (quinone) activity
OM984_10030	COG0488	(ABC) transporter
OM984_10040	COG1132	(ABC) transporter
OM984_10045	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OM984_10050	COG3409	Peptidoglycan-binding domain 1 protein
OM984_10050	COG0793	Belongs to the peptidase S41A family
OM984_10055	COG2177	Part of the ABC transporter FtsEX involved in
OM984_10060	COG2884	Cell division ATP-binding protein ftsE
OM984_10075	COG0653	protein targeting
OM984_10080	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
OM984_10085	COG1278	Cold shock
OM984_10090	COG1040	competence protein
OM984_10095	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
OM984_10100	COG0791	NLP P60 protein
OM984_10100	COG1388	LysM domain
OM984_10105	COG1733	regulation of RNA biosynthetic process
OM984_10110	COG1307	EDD domain protein, DegV family
OM984_10115	COG1739	Uncharacterized protein family UPF0029
OM984_10120	COG1316	TRANSCRIPTIONal
OM984_10125	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
OM984_10130	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
OM984_10135	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
OM984_10145	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
OM984_10145	COG3933	PFAM sigma-54 factor interaction domain-containing protein
OM984_10160	COG3394	polysaccharide catabolic process
OM984_10165	COG1486	melibiose metabolic process
OM984_10170	COG1447	Phosphotransferase system cellobiose-specific component IIA
OM984_10175	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
OM984_10185	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
OM984_10190	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
OM984_10195	COG1447	Phosphotransferase system cellobiose-specific component IIA
OM984_10205	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
OM984_10210	COG1301	dicarboxylic acid transport
OM984_10220	COG0346	lactoylglutathione lyase activity
OM984_10225	COG1511	domain protein
OM984_10230	COG0583	DNA-binding transcription factor activity
OM984_10235	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
OM984_10255	COG1294	oxidase, subunit
OM984_10260	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
OM984_10280	COG2389	metal-binding protein
OM984_10290	COG1368	sulfuric ester hydrolase activity
OM984_10305	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM984_10325	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OM984_10330	COG1388	LysM domain
OM984_10330	COG3584	3D domain protein
OM984_10355	COG4715	Zinc finger, swim domain protein
OM984_10360	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OM984_10400	COG0577	efflux transmembrane transporter activity
OM984_10405	COG1136	(ABC) transporter
OM984_10440	COG5002	protein histidine kinase activity
OM984_10445	COG0745	RESPONSE REGULATOR receiver
OM984_10450	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
OM984_10470	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
OM984_10475	COG1134	teichoic acid transport
OM984_10480	COG1682	transport, permease protein
OM984_10485	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
OM984_10530	COG1609	Transcriptional regulator
OM984_10545	COG0739	heme binding
OM984_10565	COG2385	sporulation resulting in formation of a cellular spore
OM984_10580	COG4836	Membrane
OM984_10585	COG1007	ATP synthesis coupled electron transport
OM984_10590	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OM984_10595	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OM984_10605	COG0839	Belongs to the complex I subunit 6 family
OM984_10620	COG0649	NAD binding
OM984_10625	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OM984_10640	COG3300	MHYT domain
OM984_10640	COG5001	Diguanylate cyclase
OM984_10690	COG0356	it plays a direct role in the translocation of protons across the membrane
OM984_10725	COG0698	ribose 5-phosphate isomerase
OM984_10735	COG2190	(PTS) system
OM984_10740	COG2259	Doxx family
OM984_10745	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
OM984_10760	COG0009	L-threonylcarbamoyladenylate synthase
OM984_10775	COG2890	protein-(glutamine-N5) methyltransferase activity
OM984_10795	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
OM984_10800	COG1494	fructose-1,6-bisphosphatase
OM984_10820	COG4821	SIS domain
OM984_10830	COG3343	RNA polymerase activity
OM984_10840	COG1960	acyl-CoA dehydrogenase activity
OM984_10845	COG1960	acyl-CoA dehydrogenase activity
OM984_10850	COG1250	3-hydroxyacyl-CoA dehydrogenase
OM984_10855	COG0183	Belongs to the thiolase family
OM984_10860	COG0247	lactate metabolic process
OM984_10860	COG2181	nitrate reductase activity
OM984_10865	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OM984_10875	COG5001	Diguanylate cyclase
OM984_10875	COG3300	MHYT domain
OM984_10895	COG2197	response regulator
OM984_10900	COG4585	Histidine kinase
OM984_10905	COG0842	Transport permease protein
OM984_10910	COG1131	(ABC) transporter
OM984_10915	COG0024	Methionine aminopeptidase
OM984_10925	COG2234	aminopeptidase activity
OM984_10945	COG1595	DNA-templated transcription, initiation
OM984_10950	COG0018	arginyl-trna synthetase
OM984_10955	COG4506	Protein conserved in bacteria
OM984_10960	COG1619	proteins homologs of microcin C7 resistance protein MccF
OM984_10975	COG0010	Belongs to the arginase family
OM984_10985	COG2814	Major facilitator Superfamily
OM984_10990	COG0789	Transcriptional regulator
OM984_10995	COG0584	glycerophosphoryl diester phosphodiesterase
OM984_11000	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OM984_11010	COG1994	Peptidase M50
OM984_11020	COG1078	dGTPase activity
OM984_11025	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM984_11030	COG1120	ATPase activity
OM984_11035	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM984_11060	COG0095	Lipoate-protein ligase
OM984_11065	COG0280	phosphate acetyltransferase
OM984_11080	COG3773	Cell wall hydrolase
OM984_11090	COG2363	Small membrane protein
OM984_11105	COG2233	PERMEase
OM984_11110	COG0561	phosphatase activity
OM984_11115	COG2814	Major facilitator Superfamily
OM984_11125	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
OM984_11130	COG1131	(ABC) transporter
OM984_11135	COG2755	lipolytic protein G-D-S-L family
OM984_11140	COG1609	Transcriptional regulator
OM984_11150	COG0460	homoserine dehydrogenase
OM984_11160	COG2873	o-acetylhomoserine
OM984_11170	COG1011	Hydrolase
OM984_11175	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
OM984_11185	COG2197	response regulator
OM984_11195	COG0351	phosphomethylpyrimidine kinase
OM984_11200	COG3706	GGDEF domain
OM984_11205	COG2879	small protein
OM984_11210	COG1966	Carbon starvation protein
OM984_11215	COG3279	Response regulator of the LytR AlgR family
OM984_11220	COG0477	Major facilitator Superfamily
OM984_11245	COG0840	transmembrane signaling receptor activity
OM984_11255	COG1607	acyl-coa hydrolase
OM984_11270	COG0488	(ABC) transporter
OM984_11290	COG0463	Glycosyl transferase, family 2
OM984_11295	COG1309	transcriptional regulator
OM984_11300	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OM984_11305	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OM984_11305	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OM984_11310	COG0628	permease
OM984_11325	COG3279	Response regulator of the LytR AlgR family
OM984_11330	COG3275	phosphorelay sensor kinase activity
OM984_11335	COG2814	Major facilitator Superfamily
OM984_11340	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OM984_11345	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
OM984_11350	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
OM984_11370	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
OM984_11375	COG1272	protein, Hemolysin III
OM984_11395	COG0516	GMP reductase activity
OM984_11400	COG1164	Oligoendopeptidase f
OM984_11420	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OM984_11425	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
OM984_11430	COG4853	Protein conserved in bacteria
OM984_11435	COG4863	YycH protein
OM984_11440	COG5002	protein histidine kinase activity
OM984_11445	COG0745	RESPONSE REGULATOR receiver
OM984_11475	COG0305	Participates in initiation and elongation during chromosome replication
OM984_11485	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
OM984_11490	COG4241	membrane
OM984_11500	COG0629	single-stranded DNA binding
OM984_11510	COG0012	GTP binding
OM984_11515	COG4481	Protein conserved in bacteria
OM984_11520	COG0668	transmembrane transport
OM984_11530	COG1475	DNA binding
OM984_11535	COG1192	Involved in chromosome partitioning
OM984_11560	COG1847	R3H domain protein
OM984_11565	COG0706	membrane insertase activity
OM984_11575	COG0230	Belongs to the bacterial ribosomal protein bL34 family
OM984_11585	COG0592	DNA-directed DNA polymerase activity
OM984_11590	COG2501	S4 domain
OM984_11600	COG0187	DNA topoisomerase II activity
OM984_11605	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
OM984_11640	COG0516	GMP reductase activity
OM984_11640	COG0517	IMP dehydrogenase activity
OM984_11645	COG1686	Belongs to the peptidase S11 family
OM984_11675	COG1428	Deoxynucleoside kinase
OM984_11680	COG1428	Deoxynucleoside kinase
OM984_11685	COG1335	isochorismatase
OM984_11690	COG0590	tRNA wobble adenosine to inosine editing
OM984_11700	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
OM984_11755	COG1982	Orn Lys Arg decarboxylase major
OM984_11765	COG0470	DNA polymerase III
OM984_11770	COG1774	PSP1 C-terminal conserved region
OM984_11780	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
OM984_11790	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
OM984_11795	COG2002	toxin-antitoxin pair type II binding
OM984_11800	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OM984_11800	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OM984_11805	COG0084	hydrolase, TatD family'
OM984_11810	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
OM984_11825	COG4466	Protein conserved in bacteria
OM984_11840	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
OM984_11845	COG0251	oxidation-reduction process
OM984_11875	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
OM984_11880	COG2002	toxin-antitoxin pair type II binding
OM984_11885	COG2244	polysaccharide biosynthetic process
OM984_11890	COG3956	TIGRFAM MazG family protein
OM984_11895	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
OM984_11915	COG1098	S1 RNA binding domain
OM984_11930	COG2208	phosphoserine phosphatase activity
OM984_11935	COG0037	tRNA processing
OM984_11940	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
OM984_11945	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OM984_11960	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
OM984_11965	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
OM984_11970	COG0512	Glutamine amidotransferase of anthranilate synthase
OM984_11975	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OM984_11980	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
OM984_11985	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
OM984_11990	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
OM984_11995	COG1396	sequence-specific DNA binding
OM984_12000	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
OM984_12030	COG3880	PFAM UvrB UvrC protein
OM984_12040	COG0542	response to heat
OM984_12045	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
OM984_12055	COG4956	integral membrane protein (PIN domain superfamily)
OM984_12075	COG1045	serine acetyltransferase
OM984_12090	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OM984_12095	COG3688	RNA-binding protein containing a PIN domain
OM984_12110	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
OM984_12115	COG0250	Participates in transcription elongation, termination and antitermination
OM984_12120	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
OM984_12140	COG2813	Specifically methylates the guanine in position
OM984_12150	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
OM984_12155	COG1358	cellular component organization or biogenesis
OM984_12225	COG0255	Belongs to the universal ribosomal protein uL29 family
OM984_12285	COG0201	protein transport
OM984_12295	COG0024	Methionine aminopeptidase
OM984_12305	COG0257	Belongs to the bacterial ribosomal protein bL36 family
OM984_12340	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
OM984_12365	COG0860	N-Acetylmuramoyl-L-alanine amidase
OM984_12370	COG0489	protein tyrosine kinase activity
OM984_12380	COG2194	sulfuric ester hydrolase activity
OM984_12385	COG0726	polysaccharide deacetylase
OM984_12465	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
OM984_12470	COG4856	YbbR-like protein
OM984_12485	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
OM984_12490	COG0596	Alpha beta hydrolase
OM984_12510	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
OM984_12515	COG4946	Tricorn protease homolog
OM984_12515	COG0823	Involved in the tonB-independent uptake of proteins
OM984_12515	COG1506	peptidase
OM984_12550	COG2011	ABC-type metal ion transport system permease component
OM984_12555	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
OM984_12560	COG1464	Belongs to the NlpA lipoprotein family
OM984_12565	COG0604	alcohol dehydrogenase
OM984_12575	COG0277	FAD linked oxidase domain protein
OM984_12580	COG2271	Major facilitator Superfamily
OM984_12590	COG2814	Major facilitator Superfamily
OM984_12605	COG0601	transmembrane transport
OM984_12610	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OM984_12615	COG0444	Belongs to the ABC transporter superfamily
OM984_12620	COG4608	Belongs to the ABC transporter superfamily
OM984_12625	COG4166	transmembrane transport
OM984_12635	COG2207	Transcriptional regulator
OM984_12650	COG4166	transmembrane transport
OM984_12655	COG4166	transmembrane transport
OM984_12660	COG0656	L-ascorbic acid biosynthetic process
OM984_12680	COG4149	molybdate abc transporter
OM984_12690	COG1910	domain protein
OM984_12700	COG0583	DNA-binding transcription factor activity
OM984_12705	COG0697	spore germination
OM984_12720	COG0204	Acyl-transferase
OM984_12730	COG1609	Transcriptional regulator
OM984_12740	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM984_12750	COG0084	hydrolase, TatD family'
OM984_12755	COG5298	Protein conserved in bacteria
OM984_12780	COG0488	(ABC) transporter
OM984_12795	COG0747	negative chemotaxis
OM984_12800	COG0601	transmembrane transport
OM984_12805	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OM984_12810	COG0444	Belongs to the ABC transporter superfamily
OM984_12835	COG3185	4-Hydroxyphenylpyruvate dioxygenase
OM984_12840	COG0179	Fumarylacetoacetate (FAA) hydrolase
OM984_12850	COG2814	Major facilitator Superfamily
OM984_12860	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
OM984_12870	COG4294	response to UV
OM984_12875	COG0705	Rhomboid family
OM984_12875	COG0457	Tetratricopeptide repeat
OM984_12885	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
OM984_12890	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
OM984_12895	COG0864	Transcriptional regulator
OM984_12900	COG2337	Toxic component of a toxin-antitoxin (TA) module
OM984_12905	COG2183	response to ionizing radiation
OM984_13000	COG0802	atpase or kinase
OM984_13005	COG1214	PFAM Peptidase M22, glycoprotease
OM984_13010	COG0456	acetyltransferase
OM984_13020	COG0488	(ABC) transporter
OM984_13035	COG1266	CAAX protease self-immunity
OM984_13055	COG2252	PERMEase
OM984_13065	COG5002	protein histidine kinase activity
OM984_13095	COG2226	methyltransferase
OM984_13140	COG1968	undecaprenyl-diphosphatase activity
OM984_13155	COG2205	protein histidine kinase activity
OM984_13160	COG0745	RESPONSE REGULATOR receiver
OM984_13185	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
OM984_13190	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
OM984_13195	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
OM984_13205	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
OM984_13220	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
OM984_13230	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
OM984_13240	COG0151	Belongs to the GarS family
OM984_13265	COG0210	DNA helicase
OM984_13275	COG4851	CamS sex pheromone cAM373 precursor
OM984_13295	COG1335	isochorismatase
OM984_13300	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
OM984_13305	COG2011	ABC-type metal ion transport system permease component
OM984_13310	COG1464	Belongs to the NlpA lipoprotein family
OM984_13330	COG1846	Transcriptional regulator
OM984_13355	COG1597	lipid kinase activity
OM984_13360	COG0546	phosphoglycolate phosphatase activity
OM984_13365	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
OM984_13375	COG1012	belongs to the aldehyde dehydrogenase family
OM984_13380	COG2076	Multidrug Resistance protein
OM984_13385	COG2309	aminopeptidase activity
OM984_13400	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM984_13405	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
OM984_13410	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
OM984_13420	COG4807	Protein conserved in bacteria
OM984_13445	COG1757	Na H antiporter
OM984_13450	COG1473	amidohydrolase
OM984_13465	COG0450	alkyl hydroperoxide reductase
OM984_13485	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM984_13490	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM984_13495	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM984_13510	COG0166	Belongs to the GPI family
OM984_13545	COG5002	protein histidine kinase activity
OM984_13565	COG3541	Predicted nucleotidyltransferase
OM984_13570	COG2814	Major facilitator Superfamily
OM984_13575	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OM984_13575	COG0723	plastoquinol--plastocyanin reductase activity
OM984_13585	COG0765	amino acid transport
OM984_13590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OM984_13600	COG0840	transmembrane signaling receptor activity
OM984_13605	COG0840	transmembrane signaling receptor activity
OM984_13610	COG0366	Alpha amylase catalytic
OM984_13615	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM984_13615	COG1263	PTS System
OM984_13615	COG2190	(PTS) system
OM984_13645	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
OM984_13660	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OM984_13670	COG1116	anion transmembrane transporter activity
OM984_13675	COG0488	(ABC) transporter
OM984_13720	COG2270	Major facilitator Superfamily
OM984_13735	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
OM984_13750	COG2310	stress, protein
OM984_13755	COG2310	stress, protein
OM984_13760	COG2310	stress, protein
OM984_13765	COG0861	Integral membrane protein TerC family
OM984_13775	COG3853	Toxic anion resistance protein (TelA)
OM984_13790	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
OM984_13800	COG1295	ribonuclease BN
OM984_13805	COG2217	Heavy metal translocating P-type atpase
OM984_13810	COG0697	spore germination
OM984_13830	COG0586	Pfam SNARE associated Golgi protein
OM984_13845	COG3871	stress protein (general stress protein 26)
OM984_13850	COG0387	Pfam Sodium calcium exchanger
OM984_13860	COG0535	radical SAM domain protein
OM984_13885	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
OM984_13890	COG0582	viral genome integration into host DNA
OM984_13900	COG1396	sequence-specific DNA binding
OM984_13920	COG1396	sequence-specific DNA binding
OM984_13955	COG1484	DNA-dependent DNA replication
OM984_14185	COG0101	tRNA pseudouridine synthase activity
OM984_14195	COG3829	transcription factor binding
OM984_14205	COG0833	amino acid
OM984_14210	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
OM984_14240	COG1263	PTS System
OM984_14240	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM984_14245	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OM984_14260	COG0463	Glycosyl transferase, family 2
OM984_14275	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OM984_14275	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
OM984_14290	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
OM984_14310	COG1228	amidohydrolase
OM984_14315	COG1090	epimerase
OM984_14345	COG1988	membrane-bound metal-dependent
OM984_14350	COG1194	a g-specific adenine glycosylase
OM984_14375	COG1132	(ABC) transporter
OM984_14380	COG4129	membrane
OM984_14385	COG0070	glutamate synthase
OM984_14385	COG0069	glutamate synthase activity
OM984_14385	COG0067	glutamate synthase
OM984_14395	COG4555	ABC transporter
OM984_14415	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
OM984_14420	COG0735	belongs to the Fur family
OM984_14535	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
OM984_14540	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
OM984_14550	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
OM984_14560	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
OM984_14570	COG2766	serine protein kinase
OM984_14590	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OM984_14600	COG1585	Membrane protein implicated in regulation of membrane protease activity
OM984_14605	COG2268	Band 7 protein
OM984_14615	COG3290	protein histidine kinase activity
OM984_14625	COG2851	Citrate transporter
OM984_14645	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
OM984_14650	COG3842	ATPase activity
OM984_14655	COG1175	transmembrane transport
OM984_14660	COG0395	ABC-type sugar transport system, permease component
OM984_14670	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
OM984_14675	COG0745	RESPONSE REGULATOR receiver
OM984_14680	COG5002	protein histidine kinase activity
OM984_14690	COG4990	cell redox homeostasis
OM984_14700	COG3290	protein histidine kinase activity
OM984_14705	COG4565	transcriptional regulatory protein
OM984_14710	COG3493	citrate carrier protein
OM984_14715	COG0281	malic enzyme
OM984_14730	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM984_14740	COG5002	protein histidine kinase activity
OM984_14745	COG0745	RESPONSE REGULATOR receiver
OM984_14755	COG0454	-acetyltransferase
OM984_14755	COG0456	acetyltransferase
OM984_14760	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
OM984_14765	COG3383	formate dehydrogenase (NAD+) activity
OM984_14785	COG0531	amino acid
OM984_14790	COG0640	Transcriptional regulator
OM984_14795	COG2217	Heavy metal translocating P-type atpase
OM984_14800	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
OM984_14815	COG3227	Zinc metalloprotease (Elastase)
OM984_14835	COG2720	vancomycin resistance protein
OM984_14840	COG1316	TRANSCRIPTIONal
OM984_14845	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM984_14850	COG0346	lactoylglutathione lyase activity
OM984_14860	COG1027	Aspartate ammonia-lyase
OM984_14865	COG1620	l-lactate permease
OM984_14880	COG3104	oligopeptide transport
OM984_14885	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM984_14890	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM984_14895	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM984_14905	COG2226	methyltransferase
OM984_14910	COG0156	8-amino-7-oxononanoate synthase activity
OM984_14925	COG4548	von Willebrand factor, type A
OM984_14930	COG0714	Associated with various cellular activities
OM984_14935	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OM984_14955	COG0531	amino acid
OM984_14960	COG2188	Transcriptional regulator
OM984_14965	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM984_14965	COG1263	PTS System
OM984_14970	COG0366	Alpha amylase catalytic
OM984_14985	COG0697	spore germination
OM984_14995	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
OM984_15000	COG1115	amino acid carrier protein
OM984_15005	COG1126	abc transporter atp-binding protein
OM984_15010	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OM984_15015	COG0765	amino acid transport
OM984_15020	COG0765	amino acid transport
OM984_15025	COG0833	amino acid
OM984_15050	COG2378	regulation of single-species biofilm formation
OM984_15055	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
OM984_15060	COG5002	protein histidine kinase activity
OM984_15075	COG0659	secondary active sulfate transmembrane transporter activity
OM984_15090	COG0747	negative chemotaxis
OM984_15100	COG0601	transmembrane transport
OM984_15105	COG4608	Belongs to the ABC transporter superfamily
OM984_15115	COG2271	Major facilitator Superfamily
OM984_15120	COG1846	Transcriptional regulator
OM984_15130	COG1609	Transcriptional regulator
OM984_15135	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OM984_15150	COG1172	Belongs to the binding-protein-dependent transport system permease family
OM984_15155	COG1879	ABC-type sugar transport system periplasmic component
OM984_15180	COG1063	alcohol dehydrogenase
OM984_15195	COG3568	Endonuclease Exonuclease Phosphatase
OM984_15220	COG1968	undecaprenyl-diphosphatase activity
OM984_15225	COG0840	transmembrane signaling receptor activity
OM984_15230	COG1388	LysM domain
OM984_15230	COG3584	3D domain protein
OM984_15235	COG1476	TRANSCRIPTIONal
OM984_15250	COG3104	oligopeptide transport
OM984_15255	COG1114	Component of the transport system for branched-chain amino acids
OM984_15270	COG1113	amino acid transport
OM984_15275	COG2252	PERMEase
OM984_15300	COG0569	domain protein
OM984_15300	COG0475	glutathione-regulated potassium exporter activity
OM984_15315	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
OM984_15320	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
OM984_15325	COG4990	cell redox homeostasis
OM984_15340	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OM984_15345	COG0697	spore germination
OM984_15350	COG0531	amino acid
OM984_15360	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
OM984_15365	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
OM984_15370	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
OM984_15370	COG1918	ferrous iron import across plasma membrane
OM984_15375	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
OM984_15380	COG0573	inorganic phosphate transmembrane transporter activity
OM984_15385	COG0581	inorganic phosphate transmembrane transporter activity
OM984_15395	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OM984_15510	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
OM984_15530	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
OM984_15535	COG1116	anion transmembrane transporter activity
OM984_15540	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OM984_15545	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OM984_15550	COG0352	thiamine-phosphate diphosphorylase activity
OM984_15555	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OM984_15560	COG2104	thiamine diphosphate biosynthetic process
OM984_15570	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OM984_15575	COG0351	phosphomethylpyrimidine kinase
OM984_15615	COG2205	protein histidine kinase activity
OM984_15620	COG2814	Major facilitator Superfamily
OM984_15625	COG1846	Transcriptional regulator
OM984_15640	COG2252	PERMEase
OM984_15645	COG1028	Short-chain dehydrogenase reductase Sdr
OM984_15660	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OM984_15665	COG1621	beta-fructofuranosidase activity
OM984_15670	COG1263	PTS System
OM984_15670	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM984_15675	COG1609	Transcriptional regulator
OM984_15685	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OM984_15690	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
OM984_15725	COG0778	Nitroreductase
OM984_15730	COG2719	SpoVR family
OM984_15755	COG0446	pyridine nucleotide-disulphide oxidoreductase
OM984_15760	COG1937	Protein conserved in bacteria
OM984_15765	COG0425	Belongs to the sulfur carrier protein TusA family
OM984_15765	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OM984_15770	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM984_15770	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OM984_15775	COG0425	Belongs to the sulfur carrier protein TusA family
OM984_15790	COG2210	Belongs to the sulfur carrier protein TusA family
OM984_15795	COG0730	response to heat
OM984_15805	COG1316	TRANSCRIPTIONal
OM984_15810	COG0604	alcohol dehydrogenase
OM984_15815	COG1283	sodium-dependent phosphate transmembrane transporter activity
OM984_15830	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OM984_15830	COG3711	transcriptional antiterminator
OM984_15835	COG1447	Phosphotransferase system cellobiose-specific component IIA
OM984_15840	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
OM984_15860	COG1388	LysM domain
OM984_15860	COG3584	3D domain protein
OM984_15865	COG0577	efflux transmembrane transporter activity
OM984_15870	COG1136	(ABC) transporter
OM984_15880	COG5522	Integral membrane protein (intg_mem_TP0381)
OM984_15895	COG1114	Component of the transport system for branched-chain amino acids
OM984_15900	COG3546	catalase activity
OM984_15935	COG0586	Pfam SNARE associated Golgi protein
OM984_15970	COG0531	amino acid
OM984_15975	COG0475	glutathione-regulated potassium exporter activity
OM984_15985	COG1737	Transcriptional regulator
OM984_15995	COG1263	PTS System
OM984_15995	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM984_16005	COG2259	Doxx family
OM984_16020	COG0697	spore germination
OM984_16025	COG1522	sequence-specific DNA binding
OM984_16040	COG2076	Multidrug Resistance protein
OM984_16045	COG1309	transcriptional regulator
OM984_16050	COG2814	Major facilitator Superfamily
OM984_16055	COG1733	regulation of RNA biosynthetic process
OM984_16065	COG2249	NAD(P)H dehydrogenase (quinone) activity
OM984_16070	COG4533	DNA binding
OM984_16075	COG2211	Major facilitator Superfamily
OM984_16085	COG0693	protein deglycase activity
OM984_16090	COG0753	catalase activity
OM984_16100	COG0531	amino acid
OM984_16105	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
OM984_16115	COG1012	belongs to the aldehyde dehydrogenase family
OM984_16120	COG1132	(ABC) transporter
OM984_16130	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OM984_16135	COG0765	amino acid transport
OM984_16140	COG1126	abc transporter atp-binding protein
OM984_16155	COG0189	ligase activity
OM984_16185	COG0028	Belongs to the TPP enzyme family
OM984_16190	COG3527	Alpha-acetolactate decarboxylase
OM984_16205	COG0561	phosphatase activity
OM984_16220	COG0635	Involved in the biosynthesis of porphyrin-containing compound
OM984_16235	COG0659	secondary active sulfate transmembrane transporter activity
OM984_16255	COG0653	protein targeting
OM984_16260	COG2244	polysaccharide biosynthetic process
OM984_16270	COG0860	N-Acetylmuramoyl-L-alanine amidase
OM984_16275	COG4196	transglutaminase domain protein
OM984_16290	COG1696	Membrane protein involved in D-alanine export
OM984_16305	COG1024	Enoyl-CoA hydratase
OM984_16325	COG1363	Peptidase, m42
OM984_16345	COG3938	Belongs to the proline racemase family
OM984_16385	COG0601	transmembrane transport
OM984_16390	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OM984_16400	COG4608	Belongs to the ABC transporter superfamily
OM984_16435	COG0477	Major facilitator Superfamily
OM984_16440	COG3290	protein histidine kinase activity
OM984_16445	COG4565	transcriptional regulatory protein
OM984_16450	COG3181	Tripartite tricarboxylate transporter family receptor
OM984_16480	COG0789	Transcriptional regulator
OM984_16480	COG4978	Transcriptional regulator
OM984_16495	COG0305	Participates in initiation and elongation during chromosome replication
OM984_16535	COG0477	Major facilitator Superfamily
OM984_16580	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OM984_16580	COG3320	Male sterility
OM984_16585	COG1309	transcriptional regulator
OM984_16605	COG1183	phosphatidylcholine synthase activity
OM984_16625	COG2376	Dihydroxyacetone kinase
OM984_16635	COG2376	Dihydroxyacetone kinase
OM984_16640	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
OM984_16645	COG1959	2 iron, 2 sulfur cluster binding
OM984_16675	COG3437	response regulator, receiver
OM984_16675	COG2770	Histidine kinase
OM984_16725	COG3237	CsbD-like
OM984_16750	COG1191	sigma factor activity
OM984_16760	COG2208	phosphoserine phosphatase activity
OM984_16765	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
OM984_16770	COG0784	Response regulator, receiver
OM984_16770	COG2198	Histidine kinase
OM984_16770	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OM984_16770	COG2205	protein histidine kinase activity
OM984_16825	COG0420	3'-5' exonuclease activity
OM984_16850	COG1309	transcriptional regulator
OM984_16855	COG2814	Major facilitator Superfamily
OM984_16860	COG0346	lactoylglutathione lyase activity
OM984_16865	COG0346	lactoylglutathione lyase activity
OM984_16870	COG0457	Tetratricopeptide repeat
OM984_16880	COG2267	carboxylic ester hydrolase activity
OM984_16900	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
OM984_16905	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
OM984_16915	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
OM984_16955	COG0477	Major facilitator Superfamily
OM984_16960	COG0477	Major facilitator Superfamily
OM984_16970	COG3973	AAA domain
OM984_16975	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OM984_16995	COG4980	gas vesicle protein
OM984_17000	COG0537	adenosine 5'-monophosphoramidase activity
OM984_17005	COG1131	(ABC) transporter
OM984_17010	COG4473	ABC transporter
OM984_17025	COG1309	transcriptional regulator
OM984_17035	COG3402	PFAM membrane-flanked domain
OM984_17080	COG3402	PFAM membrane-flanked domain
OM984_17085	COG3428	Bacterial PH domain
OM984_17090	COG2329	Antibiotic biosynthesis monooxygenase
OM984_17095	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OM984_17100	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
OM984_17105	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
OM984_17110	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
OM984_17145	COG1309	transcriptional regulator
OM984_17150	COG1511	domain protein
OM984_17185	COG1234	tRNA 3'-trailer cleavage
OM984_17190	COG0095	Lipoate-protein ligase
OM984_17200	COG0318	PFAM AMP-dependent synthetase and ligase
OM984_17230	COG3209	COG3209 Rhs family protein
OM984_17270	COG1078	dGTPase activity
OM984_17280	COG1595	DNA-templated transcription, initiation
OM984_17285	COG3708	Transcriptional regulator
OM984_17285	COG2207	Transcriptional regulator
OM984_17300	COG2205	protein histidine kinase activity
OM984_17305	COG0745	RESPONSE REGULATOR receiver
OM984_17330	COG0501	Belongs to the peptidase M48B family
OM984_17335	COG0840	transmembrane signaling receptor activity
OM984_17340	COG0697	spore germination
OM984_17360	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
OM984_17365	COG2224	Isocitrate lyase
OM984_17390	COG4903	ComK protein
OM984_17395	COG0398	Pfam SNARE associated Golgi protein
OM984_17405	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
OM984_17410	COG1074	ATP-dependent DNA helicase activity
OM984_17455	COG0179	Fumarylacetoacetate (FAA) hydrolase
OM984_17480	COG0367	asparagine synthase
OM984_17485	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
OM984_17490	COG0753	catalase activity
OM984_17495	COG0004	ammonium transporteR
OM984_17515	COG2996	Protein conserved in bacteria
OM984_17525	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OM984_17535	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM984_17550	COG0561	phosphatase activity
OM984_17560	COG0542	response to heat
OM984_17570	COG2267	carboxylic ester hydrolase activity
OM984_17585	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM984_17590	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OM984_17595	COG5504	Zn-dependent protease
OM984_17605	COG0180	Tryptophanyl-tRNA synthetase
OM984_17615	COG4166	transmembrane transport
OM984_17620	COG0601	transmembrane transport
OM984_17625	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OM984_17630	COG0444	Belongs to the ABC transporter superfamily
OM984_17635	COG4608	Belongs to the ABC transporter superfamily
OM984_17640	COG0534	Mate efflux family protein
OM984_17645	COG4166	transmembrane transport
OM984_17660	COG0861	Integral membrane protein TerC family
OM984_17665	COG4862	establishment of competence for transformation
OM984_17670	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OM984_17680	COG1164	Oligoendopeptidase f
OM984_17690	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
OM984_17695	COG2346	COG2346, Truncated hemoglobins
OM984_17700	COG4116	CYTH
OM984_17710	COG2357	RelA SpoT domain protein
OM984_17720	COG0564	pseudouridine synthase activity
OM984_17740	COG0463	Glycosyl transferase, family 2
OM984_17740	COG1216	Glycosyl transferase, family 2
OM984_17760	COG0457	Tetratricopeptide repeat
OM984_17760	COG0463	Glycosyl transferase, family 2
OM984_17780	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
OM984_17795	COG1091	dTDP-4-dehydrorhamnose reductase activity
OM984_17840	COG2153	protein acetylation
OM984_17850	COG2382	esterase
OM984_17865	COG5492	domain, Protein
OM984_17870	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OM984_17880	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
OM984_17880	COG0512	Glutamine amidotransferase of anthranilate synthase
OM984_17915	COG1620	l-lactate permease
OM984_17920	COG5634	Uncharacterized conserved protein (DUF2278)
OM984_17975	COG0508	dehydrogenase complex catalyzes the overall conversion of
OM984_17985	COG1476	TRANSCRIPTIONal
OM984_18045	COG2226	methyltransferase
OM984_18055	COG1686	Belongs to the peptidase S11 family
OM984_18060	COG0681	Belongs to the peptidase S26 family
OM984_18095	COG1012	belongs to the aldehyde dehydrogenase family
OM984_18100	COG3842	ATPase activity
OM984_18105	COG1176	ABC-type spermidine putrescine transport system, permease component I
OM984_18110	COG1177	transmembrane transport
OM984_18115	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
OM984_18125	COG2409	Drug exporters of the RND superfamily
OM984_18135	COG0564	pseudouridine synthase activity
OM984_18145	COG2340	Cysteine-rich secretory protein family
OM984_18150	COG0247	lactate metabolic process
OM984_18155	COG0277	FAD linked oxidase domain protein
OM984_18160	COG3835	regulator
OM984_18170	COG0745	RESPONSE REGULATOR receiver
OM984_18175	COG5002	protein histidine kinase activity
OM984_18180	COG2186	Transcriptional regulator
OM984_18200	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
OM984_18210	COG2116	formate transmembrane transporter activity
OM984_18215	COG0861	Integral membrane protein TerC family
OM984_18220	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OM984_18230	COG2030	dehydratase
OM984_18250	COG1028	Short-chain dehydrogenase reductase Sdr
OM984_18255	COG3243	poly(R)-hydroxyalkanoic acid synthase
OM984_18260	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OM984_18265	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OM984_18280	COG1840	ABC-type Fe3 transport system, periplasmic component
OM984_18310	COG1349	DNA-binding transcription factor activity
OM984_18330	COG2861	carbohydrate metabolic process
OM984_18340	COG3852	Histidine kinase
OM984_18345	COG1846	Transcriptional regulator
OM984_18355	COG2318	DinB family
OM984_18365	COG5002	protein histidine kinase activity
OM984_18375	COG0720	synthase
OM984_18390	COG4873	Protein conserved in bacteria
OM984_18420	COG1780	Probably involved in ribonucleotide reductase function
OM984_18440	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
OM984_18445	COG1725	Transcriptional regulator
OM984_18450	COG1131	(ABC) transporter
OM984_18460	COG1131	(ABC) transporter
OM984_18465	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
OM984_18480	COG1522	sequence-specific DNA binding
OM984_18490	COG1335	isochorismatase
OM984_18500	COG1619	proteins homologs of microcin C7 resistance protein MccF
OM984_18505	COG2070	2-Nitropropane dioxygenase
OM984_18510	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
OM984_18520	COG1696	Membrane protein involved in D-alanine export
OM984_18545	COG0716	FMN binding
OM984_18560	COG3173	Aminoglycoside phosphotransferase
OM984_18580	COG0534	Mate efflux family protein
OM984_18585	COG1968	undecaprenyl-diphosphatase activity
OM984_18600	COG1846	Transcriptional regulator
OM984_18610	COG1301	dicarboxylic acid transport
OM984_18615	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OM984_18620	COG4709	membrane
OM984_18625	COG3874	Sporulation protein YtfJ
OM984_18645	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OM984_18650	COG0028	Belongs to the TPP enzyme family
OM984_18655	COG0440	acetolactate synthase activity
OM984_18660	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
OM984_18670	COG0473	3-isopropylmalate dehydrogenase activity
OM984_18695	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
OM984_18730	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
OM984_18745	COG1183	phosphatidylcholine synthase activity
OM984_18750	COG1368	sulfuric ester hydrolase activity
OM984_18760	COG0019	diaminopimelate decarboxylase activity
OM984_18780	COG0529	Catalyzes the synthesis of activated sulfate
OM984_18785	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OM984_18805	COG1648	precorrin-2 dehydrogenase activity
OM984_18810	COG0733	neurotransmitter:sodium symporter activity
OM984_18830	COG1757	Na H antiporter
OM984_18845	COG4758	membrane
OM984_18850	COG4585	Histidine kinase
OM984_18855	COG2197	response regulator
OM984_18865	COG1114	Component of the transport system for branched-chain amino acids
OM984_18875	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
OM984_18900	COG1017	nitric oxide dioxygenase activity
OM984_18900	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
OM984_18915	COG0730	response to heat
OM984_18920	COG0306	phosphate transporter
OM984_18925	COG1392	Phosphate transport regulator
OM984_18930	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OM984_18950	COG1801	Protein of unknown function DUF72
OM984_18960	COG0582	viral genome integration into host DNA
OM984_18965	COG5002	protein histidine kinase activity
OM984_18985	COG0392	lysyltransferase activity
OM984_18985	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
OM984_19000	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
OM984_19005	COG1686	Belongs to the peptidase S11 family
OM984_19010	COG2715	membrane protein required for spore maturation
OM984_19015	COG0700	Nucleoside recognition
OM984_19020	COG1187	pseudouridine synthase activity
OM984_19030	COG1333	cytochrome c biogenesis protein
OM984_19035	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
OM984_19040	COG0745	RESPONSE REGULATOR receiver
OM984_19045	COG5002	protein histidine kinase activity
OM984_19050	COG2096	Adenosyltransferase
OM984_19065	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
OM984_19070	COG1141	Ferredoxin
OM984_19075	COG4955	Helix-turn-helix domain
OM984_19080	COG0514	ATP-dependent DNA helicase (RecQ)
OM984_19085	COG1266	CAAX protease self-immunity
OM984_19105	COG4862	establishment of competence for transformation
OM984_19110	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
OM984_19130	COG0492	ferredoxin-NADP+ reductase activity
OM984_19205	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
OM984_19220	COG0142	geranyltranstransferase activity
OM984_19230	COG0142	geranyltranstransferase activity
OM984_19250	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
OM984_19255	COG0457	Tetratricopeptide repeat
OM984_19275	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
OM984_19285	COG4347	Protein of unknown function (DUF1405)
OM984_19300	COG2738	Putative neutral zinc metallopeptidase
OM984_19310	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM984_19315	COG1694	Mazg nucleotide pyrophosphohydrolase
OM984_19330	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
OM984_19335	COG0438	transferase activity, transferring glycosyl groups
OM984_19370	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
OM984_19370	COG1199	ATP-dependent helicase activity
OM984_19390	COG3935	DnaD domain protein
OM984_19395	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
OM984_19405	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OM984_19405	COG4499	WXG100 protein secretion system (Wss), protein YukC
OM984_19465	COG0116	Belongs to the methyltransferase superfamily
OM984_19475	COG1199	ATP-dependent helicase activity
OM984_19480	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
OM984_19490	COG3173	Aminoglycoside phosphotransferase
OM984_19495	COG0024	Methionine aminopeptidase
OM984_19505	COG2233	PERMEase
OM984_19510	COG2311	Membrane
OM984_19515	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
OM984_19525	COG0456	acetyltransferase
OM984_19575	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OM984_19600	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
OM984_19615	COG1215	transferase activity, transferring glycosyl groups
OM984_19620	COG0438	transferase activity, transferring glycosyl groups
OM984_19635	COG0454	-acetyltransferase
OM984_19655	COG0328	RNA-DNA hybrid ribonuclease activity
OM984_19695	COG1280	lysine exporter protein (LysE YggA)
OM984_19710	COG3162	membrane
OM984_19715	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OM984_19720	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
OM984_19730	COG0475	glutathione-regulated potassium exporter activity
OM984_19735	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
OM984_19740	COG4978	Transcriptional regulator
OM984_19740	COG0789	Transcriptional regulator
OM984_19750	COG2323	membrane
OM984_19755	COG1434	Gram-negative-bacterium-type cell wall biogenesis
OM984_19810	COG1923	regulation of RNA biosynthetic process
OM984_19820	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
OM984_19825	COG1360	Flagellar Motor Protein
OM984_19830	COG2201	protein-glutamate methylesterase activity
OM984_19840	COG1776	CheC inhibitor of MCP methylation
OM984_19840	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
OM984_19855	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
OM984_19875	COG1256	bacterial-type flagellum assembly
OM984_19900	COG1815	bacterial-type flagellum-dependent cell motility
OM984_19905	COG1558	bacterial-type flagellum-dependent cell motility
OM984_19920	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
OM984_19930	COG1157	protein secretion by the type III secretion system
OM984_19975	COG0463	Glycosyl transferase, family 2
OM984_20000	COG0463	Glycosyl transferase, family 2
OM984_20000	COG0457	Tetratricopeptide repeat
OM984_20015	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
OM984_20020	COG0741	lytic transglycosylase activity
OM984_20035	COG1776	CheC inhibitor of MCP methylation
OM984_20035	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
OM984_20045	COG1338	Plays a role in the flagellum-specific transport system
OM984_20050	COG1987	bacterial-type flagellum assembly
OM984_20060	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
OM984_20065	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
OM984_20075	COG4786	Flagellar basal body rod
OM984_20080	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
OM984_20105	COG1309	transcriptional regulator
OM984_20125	COG2329	Antibiotic biosynthesis monooxygenase
OM984_20150	COG0583	DNA-binding transcription factor activity
OM984_20160	COG0725	ABC transporter, periplasmic molybdate-binding protein
OM984_20170	COG1234	tRNA 3'-trailer cleavage
OM984_20195	COG1686	Belongs to the peptidase S11 family
OM984_20205	COG0406	alpha-ribazole phosphatase activity
OM984_20235	COG0367	asparagine synthase
OM984_20265	COG1802	Transcriptional regulator
OM984_20270	COG0697	spore germination
OM984_20275	COG0523	cobalamin synthesis protein
OM984_20280	COG0701	Predicted permease
OM984_20290	COG0438	transferase activity, transferring glycosyl groups
OM984_20290	COG1216	Glycosyl transferase, family 2
OM984_20295	COG1757	Na H antiporter
OM984_20300	COG0114	fumarate hydratase activity
OM984_20325	COG3340	Belongs to the peptidase S51 family
OM984_20345	COG0785	Cytochrome C biogenesis protein
OM984_20375	COG2733	membrane
OM984_20410	COG1131	(ABC) transporter
OM984_20425	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OM984_20430	COG0528	UMP kinase activity
OM984_20440	COG1027	Aspartate ammonia-lyase
OM984_20445	COG0281	malic enzyme
OM984_20450	COG4191	Histidine kinase
OM984_20455	COG0784	Response regulator, receiver
OM984_20460	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OM984_20520	COG0860	N-Acetylmuramoyl-L-alanine amidase
OM984_20530	COG2814	Major facilitator Superfamily
OM984_20545	COG1966	Carbon starvation protein
OM984_20570	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
OM984_20585	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
OM984_20600	COG2244	polysaccharide biosynthetic process
OM984_20605	COG0733	neurotransmitter:sodium symporter activity
OM984_20615	COG5566	PFAM Mor transcription activator
OM984_20635	COG2084	Dehydrogenase
OM984_20650	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OM984_20660	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OM984_20665	COG0028	Belongs to the TPP enzyme family
OM984_20670	COG0440	acetolactate synthase activity
OM984_20675	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
OM984_20685	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
OM984_20710	COG2814	Major facilitator Superfamily
OM984_20715	COG3384	dioxygenase
OM984_20725	COG3279	Response regulator of the LytR AlgR family
OM984_20730	COG0427	acetyl-CoA hydrolase
OM984_20750	COG1073	alpha beta
OM984_20780	COG0535	radical SAM domain protein
OM984_20785	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM984_20805	COG1914	H( )-stimulated, divalent metal cation uptake system
OM984_20820	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
OM984_20855	COG2390	Transcriptional regulator
OM984_20865	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM984_20870	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
OM984_20885	COG4224	UPF0291 protein
OM984_20905	COG0006	proline dipeptidase activity
OM984_20910	COG2132	Multicopper oxidase
OM984_20925	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
OM984_20940	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
OM984_20955	COG2372	response to copper ion
OM984_20955	COG1276	copper resistance
OM984_20960	COG4549	nuclear export factor GLE1
OM984_20970	COG0697	spore germination
OM984_20975	COG0583	DNA-binding transcription factor activity
OM984_20980	COG1959	2 iron, 2 sulfur cluster binding
OM984_20985	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
OM984_20990	COG0778	Nitroreductase
OM984_21005	COG0628	permease
OM984_21015	COG1231	oxidoreductase activity
OM984_21020	COG0523	cobalamin synthesis protein
OM984_21035	COG0318	PFAM AMP-dependent synthetase and ligase
OM984_21040	COG2030	dehydratase
OM984_21045	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM984_21055	COG0411	ABC transporter
OM984_21075	COG0583	DNA-binding transcription factor activity
OM984_21085	COG1942	4-Oxalocrotonate Tautomerase
OM984_21095	COG1846	Transcriptional regulator
OM984_21105	COG1271	oxidase subunit
OM984_21110	COG1294	oxidase, subunit
OM984_21115	COG4988	ABC transporter
OM984_21120	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
OM984_21140	COG1686	Belongs to the peptidase S11 family
OM984_21155	COG0791	NLP P60 protein
OM984_21155	COG1388	LysM domain
OM984_21170	COG0745	RESPONSE REGULATOR receiver
OM984_21175	COG5002	protein histidine kinase activity
OM984_21185	COG0300	oxidoreductase activity
OM984_21220	COG0460	homoserine dehydrogenase
OM984_21245	COG1316	TRANSCRIPTIONal
OM984_21255	COG0745	RESPONSE REGULATOR receiver
OM984_21260	COG5002	protein histidine kinase activity
OM984_21275	COG1285	pathogenesis
OM984_21280	COG1247	-acetyltransferase
OM984_21300	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OM984_21310	COG1082	Xylose isomerase domain protein TIM barrel
OM984_21325	COG1279	arginine transmembrane transporter activity
OM984_21335	COG1752	Esterase of the alpha-beta hydrolase superfamily
OM984_21375	COG2002	toxin-antitoxin pair type II binding
OM984_21380	COG1404	Belongs to the peptidase S8 family
OM984_21385	COG0640	Transcriptional regulator
OM984_21390	COG0667	Aldo Keto reductase
OM984_21395	COG2814	Major facilitator Superfamily
OM984_21420	COG0840	transmembrane signaling receptor activity
OM984_21435	COG3949	Membrane
OM984_21440	COG0783	Belongs to the Dps family
OM984_21455	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OM984_21465	COG1231	oxidoreductase activity
OM984_21475	COG4989	oxidoreductase activity
OM984_21480	COG0523	cobalamin synthesis protein
OM984_21485	COG0456	acetyltransferase
OM984_21545	COG0803	Belongs to the bacterial solute-binding protein 9 family
OM984_21545	COG3443	Belongs to the bacterial solute-binding protein 9 family
OM984_21555	COG0702	epimerase
OM984_21565	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
OM984_21575	COG4166	transmembrane transport
OM984_21590	COG0406	alpha-ribazole phosphatase activity
OM984_21600	COG5337	Spore coat protein CotH
OM984_21605	COG1051	belongs to the nudix hydrolase family
OM984_21610	COG0586	Pfam SNARE associated Golgi protein
OM984_21615	COG2244	polysaccharide biosynthetic process
OM984_21625	COG0701	Predicted permease
OM984_21630	COG3689	TIGRFAM TIGR03943 family protein
OM984_21635	COG1607	acyl-coa hydrolase
OM984_21660	COG0702	epimerase
OM984_21665	COG2839	Protein conserved in bacteria
OM984_21670	COG1253	flavin adenine dinucleotide binding
OM984_21685	COG1114	Component of the transport system for branched-chain amino acids
OM984_21690	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OM984_21710	COG0860	N-Acetylmuramoyl-L-alanine amidase
OM984_21720	COG1876	peptidase activity
OM984_21730	COG0154	amidase activity
OM984_21735	COG2211	Major facilitator Superfamily
OM984_21755	COG0561	phosphatase activity
OM984_21765	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
OM984_21770	COG4106	trans-aconitate 2-methyltransferase activity
OM984_21785	COG1819	glycosyl
OM984_21790	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM984_21795	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM984_21830	COG0456	acetyltransferase
OM984_21885	COG3874	Sporulation protein YtfJ
OM984_21910	COG2226	methyltransferase
OM984_21935	COG0346	lactoylglutathione lyase activity
OM984_21945	COG0604	alcohol dehydrogenase
OM984_21950	COG1595	DNA-templated transcription, initiation
OM984_21975	COG0386	Belongs to the glutathione peroxidase family
OM984_21980	COG1305	Transglutaminase-like
OM984_21985	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
OM984_21990	COG0714	Associated with various cellular activities
OM984_22005	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
OM984_22010	COG1140	nitrate reductase beta subunit
OM984_22015	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
OM984_22020	COG2181	nitrate reductase activity
OM984_22040	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
OM984_22045	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
OM984_22050	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OM984_22055	COG0303	'Molybdopterin
OM984_22060	COG0314	molybdopterin synthase activity
OM984_22070	COG2223	nitrite transmembrane transporter activity
OM984_22085	COG1648	precorrin-2 dehydrogenase activity
OM984_22095	COG1587	Uroporphyrinogen-III synthase
OM984_22095	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
OM984_22100	COG2146	nitrite reductase [NAD(P)H] activity
OM984_22105	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OM984_22110	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
OM984_22145	COG2359	stage V sporulation protein S
OM984_22170	COG1418	mRNA catabolic process
OM984_22175	COG0488	(ABC) transporter
OM984_22190	COG0629	single-stranded DNA binding
OM984_22205	COG1413	lyase activity
OM984_22220	COG2136	Putative SAM-dependent methyltransferase
OM984_22220	COG2521	methyltransferase
OM984_22225	COG0018	arginyl-trna synthetase
OM984_22250	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
OM984_22270	COG0017	Asparaginyl-tRNA synthetase
OM984_22290	COG1674	ftsk spoiiie
OM984_22360	COG1929	Belongs to the glycerate kinase type-1 family
OM984_22365	COG0471	metal ion transport
OM984_22370	COG0745	RESPONSE REGULATOR receiver
OM984_22375	COG3850	Histidine kinase
OM984_22375	COG5002	protein histidine kinase activity
OM984_22390	COG0733	neurotransmitter:sodium symporter activity
OM984_22415	COG2610	gluconate transmembrane transporter activity
OM984_22420	COG1454	alcohol dehydrogenase
OM984_22425	COG1794	racemase activity, acting on amino acids and derivatives
OM984_22435	COG0456	acetyltransferase
OM984_22450	COG1131	(ABC) transporter
OM984_22465	COG0546	phosphoglycolate phosphatase activity
OM984_22485	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OM984_22500	COG0768	penicillin binding
OM984_22505	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
OM984_22510	COG0204	Acyl-transferase
OM984_22515	COG1272	protein, Hemolysin III
OM984_22525	COG0805	protein transport
OM984_22535	COG1307	EDD domain protein, DegV family
OM984_22540	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
OM984_22545	COG1999	signal sequence binding
OM984_22550	COG0071	Belongs to the small heat shock protein (HSP20) family
OM984_22555	COG0367	asparagine synthase
OM984_22570	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM984_22575	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OM984_22610	COG0668	transmembrane transport
OM984_22615	COG4585	Histidine kinase
OM984_22615	COG2203	Gaf domain
OM984_22620	COG2197	response regulator
OM984_22630	COG1064	alcohol dehydrogenase
OM984_22685	COG1125	glycine betaine transport
OM984_22685	COG0517	IMP dehydrogenase activity
OM984_22690	COG1174	glycine betaine transport
OM984_22725	COG1253	flavin adenine dinucleotide binding
OM984_22730	COG1012	belongs to the aldehyde dehydrogenase family
OM984_22735	COG5506	Protein of unknown function (DUF1694)
OM984_22750	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
OM984_22755	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
OM984_22760	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
OM984_22765	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
OM984_22770	COG0456	acetyltransferase
OM984_22775	COG3829	transcription factor binding
OM984_22780	COG1509	lysine 2,3-aminomutase activity
OM984_22820	COG4326	sporulation control protein
OM984_22825	COG0671	phosphoesterase, PA-phosphatase related
OM984_22830	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
OM984_22835	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OM984_22865	COG1715	Restriction endonuclease
OM984_22865	COG1787	Restriction endonuclease
OM984_22995	COG4499	WXG100 protein secretion system (Wss), protein YukC
OM984_22995	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OM984_23005	COG2814	Major facilitator Superfamily
OM984_23010	COG4841	protein insertion into membrane
OM984_23015	COG0372	Belongs to the citrate synthase family
OM984_23020	COG2079	MmgE PrpD family protein
OM984_23025	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
OM984_23030	COG1960	acyl-CoA dehydrogenase activity
OM984_23035	COG2084	Dehydrogenase
OM984_23045	COG1280	lysine exporter protein (LysE YggA)
OM984_23050	COG1024	Enoyl-CoA hydratase
OM984_23065	COG0420	3'-5' exonuclease activity
OM984_23070	COG0419	ATPase involved in DNA repair
OM984_23090	COG2223	nitrite transmembrane transporter activity
OM984_23095	COG1028	Short-chain dehydrogenase reductase Sdr
OM984_23100	COG1169	isochorismate synthase
OM984_23105	COG1021	2,3-dihydroxybenzoate-AMP ligase
OM984_23110	COG3433	isochorismatase activity
OM984_23110	COG1535	isochorismatase
OM984_23115	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
OM984_23120	COG3251	PFAM MbtH domain protein
OM984_23125	COG2814	Major facilitator Superfamily
OM984_23140	COG0776	regulation of translation
OM984_23150	COG2318	DinB family
OM984_23160	COG1115	amino acid carrier protein
OM984_23175	COG2329	Antibiotic biosynthesis monooxygenase
OM984_23180	COG1187	pseudouridine synthase activity
OM984_23185	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
OM984_23200	COG0596	Alpha beta hydrolase
OM984_23205	COG2814	Major facilitator Superfamily
OM984_23225	COG2226	methyltransferase
OM984_23270	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM984_23305	COG1247	-acetyltransferase
OM984_23335	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
OM984_23345	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM984_23355	COG1278	Cold shock
OM984_23370	COG0010	Belongs to the arginase family
OM984_23375	COG0561	phosphatase activity
OM984_23420	COG0583	DNA-binding transcription factor activity
OM984_23425	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
OM984_23440	COG0583	DNA-binding transcription factor activity
OM984_23445	COG2258	MOSC domain
OM984_23460	COG1132	(ABC) transporter
OM984_23465	COG1132	(ABC) transporter
OM984_23485	COG1396	sequence-specific DNA binding
OM984_23510	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
OM984_23515	COG1595	DNA-templated transcription, initiation
OM984_23540	COG1649	PFAM Uncharacterised BCR, COG1649
OM984_23565	COG2971	BadF BadG BcrA BcrD
OM984_23570	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
OM984_23575	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
OM984_23595	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM984_23625	COG1309	transcriptional regulator
OM984_23640	COG0577	efflux transmembrane transporter activity
OM984_23640	COG1136	(ABC) transporter
OM984_23645	COG0500	methyltransferase
OM984_23645	COG3615	Tellurite resistance protein tehB
OM984_23655	COG2226	methyltransferase
OM984_23660	COG3961	Belongs to the TPP enzyme family
OM984_23665	COG1846	Transcriptional regulator
OM984_23710	COG2195	Cleaves the N-terminal amino acid of tripeptides
OM984_23725	COG1595	DNA-templated transcription, initiation
OM984_23745	COG2367	Beta-lactamase
OM984_23750	COG0671	phosphoesterase, PA-phosphatase related
OM984_23755	COG1609	Transcriptional regulator
OM984_23760	COG2814	Major facilitator Superfamily
OM984_23765	COG0673	inositol 2-dehydrogenase activity
OM984_23775	COG1012	belongs to the aldehyde dehydrogenase family
OM984_23790	COG0191	fructose-bisphosphate aldolase activity
OM984_23795	COG3718	enzyme involved in inositol metabolism
OM984_23820	COG0457	Tetratricopeptide repeat
OM984_23825	COG1476	TRANSCRIPTIONal
OM984_23840	COG1876	peptidase activity
OM984_23860	COG1309	transcriptional regulator
OM984_23865	COG0488	(ABC) transporter
OM984_23880	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM984_23895	COG1252	NADH dehydrogenase
OM984_23900	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OM984_23915	COG1131	(ABC) transporter
OM984_23925	COG1309	transcriptional regulator
OM984_23940	COG1960	acyl-CoA dehydrogenase activity
OM984_23945	COG0439	Biotin carboxylase
OM984_23950	COG0511	ligase activity, forming carbon-carbon bonds
OM984_23955	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
OM984_23960	COG1024	Enoyl-CoA hydratase
OM984_23965	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
OM984_23970	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OM984_23980	COG1247	-acetyltransferase
OM984_23985	COG0572	uridine kinase
OM984_23995	COG2318	DinB family
OM984_24025	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
OM984_24065	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OM984_24065	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OM984_24090	COG2814	Major facilitator Superfamily
OM984_24110	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
OM984_24130	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM984_24145	COG1063	alcohol dehydrogenase
OM984_24160	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
OM984_24165	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
OM984_24180	COG3773	Cell wall hydrolase
OM984_24190	COG0745	RESPONSE REGULATOR receiver
OM984_24220	COG1136	(ABC) transporter
OM984_24245	COG0460	homoserine dehydrogenase
OM984_24250	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM984_24260	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
OM984_24330	COG2124	cytochrome p450
OM984_24365	COG0561	phosphatase activity
OM984_24375	COG0768	penicillin binding
OM984_24380	COG1819	glycosyl
OM984_24385	COG1794	racemase activity, acting on amino acids and derivatives
OM984_24395	COG1122	ATPase activity
OM984_24410	COG2205	protein histidine kinase activity
OM984_24420	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
OM984_24425	COG0604	alcohol dehydrogenase
OM984_24440	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OM984_24475	COG0693	protein deglycase activity
OM984_24520	COG0584	glycerophosphoryl diester phosphodiesterase
OM984_24540	COG0697	spore germination
OM984_24570	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OM984_24580	COG2223	nitrite transmembrane transporter activity
OM984_24595	COG2816	NAD+ diphosphatase activity
OM984_24600	COG0592	DNA-directed DNA polymerase activity
OM984_24605	COG1051	belongs to the nudix hydrolase family
OM984_24640	COG3878	Protein conserved in bacteria
OM984_24690	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
OM984_24705	COG0322	excinuclease ABC activity
OM984_24745	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OM984_24770	COG1011	Hydrolase
OM984_24790	COG0076	glutamate decarboxylase activity
OM984_24805	COG1523	belongs to the glycosyl hydrolase 13 family
OM984_24810	COG3227	Zinc metalloprotease (Elastase)
OM984_24830	COG0201	protein transport
OM984_24840	COG0697	spore germination
OM984_24845	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM984_24875	COG4129	membrane
OM984_24880	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM984_24895	COG2959	enzyme of heme biosynthesis
OM984_24915	COG3483	tryptophan 2,3-dioxygenase activity
OM984_24920	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
OM984_24925	COG3844	kynureninase activity
OM984_24930	COG1309	transcriptional regulator
OM984_24960	COG3284	Transcriptional regulator
OM984_24980	COG1349	DNA-binding transcription factor activity
OM984_25000	COG1959	2 iron, 2 sulfur cluster binding
OM984_25015	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OM984_25020	COG0508	dehydrogenase complex catalyzes the overall conversion of
OM984_25025	COG0022	dehydrogenase e1 component
OM984_25030	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
OM984_25040	COG1028	Short-chain dehydrogenase reductase Sdr
OM984_25045	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
OM984_25045	COG0456	acetyltransferase
OM984_25075	COG4176	ABC-type proline glycine betaine transport system permease component
OM984_25080	COG4175	Glycine betaine
OM984_25080	COG0517	IMP dehydrogenase activity
OM984_25105	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
OM984_25110	COG2153	protein acetylation
OM984_25115	COG3397	chitin binding
OM984_25130	COG2205	protein histidine kinase activity
OM984_25160	COG0658	competence protein
OM984_25160	COG2333	competence protein COMEC
OM984_25210	COG3973	AAA domain
OM984_25225	COG2105	PFAM AIG2 family protein
OM984_25230	COG0514	ATP-dependent DNA helicase (RecQ)
OM984_25250	COG4637	Psort location Cytoplasmic, score
OM984_25275	COG3397	chitin binding
OM984_25290	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
OM984_25295	COG1115	amino acid carrier protein
OM984_25300	COG1012	belongs to the aldehyde dehydrogenase family
OM984_25305	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
OM984_25315	COG3938	Belongs to the proline racemase family
OM984_25320	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OM984_25360	COG0586	Pfam SNARE associated Golgi protein
OM984_25375	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
OM984_25380	COG0519	Catalyzes the synthesis of GMP from XMP
OM984_25385	COG4166	transmembrane transport
OM984_25395	COG4948	Mandelate Racemase Muconate Lactonizing
OM984_25440	COG2936	dipeptidyl-peptidase activity
OM984_25445	COG5002	protein histidine kinase activity
OM984_25495	COG1307	EDD domain protein, DegV family
OM984_25515	COG2814	Major facilitator Superfamily
OM984_25525	COG1664	Polymer-forming cytoskeletal
OM984_25530	COG0789	Transcriptional regulator
OM984_25535	COG4533	DNA binding
OM984_25540	COG0477	Major facilitator Superfamily
OM984_25540	COG2814	Major facilitator Superfamily
OM984_25560	COG2261	transglycosylase associated protein
OM984_25575	COG2226	methyltransferase
OM984_25610	COG0436	Aminotransferase
OM984_25615	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
OM984_25620	COG5146	pantothenate kinase activity
OM984_25685	COG0628	permease
OM984_25700	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OM984_25705	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OM984_25710	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OM984_25715	COG1116	anion transmembrane transporter activity
OM984_25735	COG2816	NAD+ diphosphatase activity
OM984_25755	COG2746	aminoglycoside 3-N-acetyltransferase activity
OM984_25780	COG0697	spore germination
OM984_25785	COG2318	DinB family
OM984_25805	COG4912	Dna alkylation repair
OM984_25825	COG0861	Integral membrane protein TerC family
OM984_25830	COG1368	sulfuric ester hydrolase activity
OM984_25835	COG0488	(ABC) transporter
OM984_25850	COG1309	transcriptional regulator
OM984_25865	COG0287	Prephenate dehydrogenase
OM984_25870	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
OM984_25875	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
OM984_25880	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
OM984_25880	COG1605	Chorismate mutase
OM984_25915	COG3584	3D domain protein
OM984_25915	COG1388	LysM domain
OM984_25925	COG1595	DNA-templated transcription, initiation
OM984_25950	COG1879	ABC-type sugar transport system periplasmic component
OM984_25960	COG1172	Belongs to the binding-protein-dependent transport system permease family
OM984_25970	COG2390	Transcriptional regulator
OM984_26005	COG2329	Antibiotic biosynthesis monooxygenase
OM984_26025	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM984_26035	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
OM984_26040	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
OM984_26045	COG4187	Peptidase family M20/M25/M40
OM984_26050	COG1414	Transcriptional regulator
OM984_26055	COG0833	amino acid
OM984_26060	COG1690	Belongs to the RtcB family
OM984_26070	COG1785	Belongs to the alkaline phosphatase family
OM984_26080	COG3655	Transcriptional regulator
OM984_26095	COG4377	Putative membrane peptidase family (DUF2324)
OM984_26105	COG3279	Response regulator of the LytR AlgR family
OM984_26115	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM984_26120	COG0346	lactoylglutathione lyase activity
OM984_26140	COG0714	Associated with various cellular activities
OM984_26165	COG0463	Glycosyl transferase, family 2
OM984_26185	COG0463	Glycosyl transferase, family 2
OM984_26195	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
OM984_26200	COG0753	catalase activity
OM984_26210	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
OM984_26235	COG0714	Associated with various cellular activities
OM984_26245	COG0778	Nitroreductase
OM984_26250	COG1846	Transcriptional regulator
OM984_26285	COG1725	Transcriptional regulator
OM984_26295	COG1136	(ABC) transporter
OM984_26295	COG0577	efflux transmembrane transporter activity
OM984_26320	COG2207	Transcriptional regulator
OM984_26325	COG0456	acetyltransferase
OM984_26345	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM984_26365	COG0642	Histidine kinase
OM984_26370	COG0745	RESPONSE REGULATOR receiver
OM984_26375	COG0596	Alpha beta hydrolase
OM984_26405	COG0730	response to heat
OM984_26415	COG0833	amino acid
OM984_26425	COG4335	DNA alkylation repair
OM984_26465	COG0768	penicillin binding
OM984_26475	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
OM984_26510	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
OM984_26515	COG1414	Transcriptional regulator
OM984_26530	COG0860	N-Acetylmuramoyl-L-alanine amidase
OM984_26535	COG0640	Transcriptional regulator
OM984_26545	COG1960	acyl-CoA dehydrogenase activity
OM984_26560	COG3314	Sporulation integral membrane protein YlbJ
OM984_26575	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
OM984_26590	COG3848	Pyruvate phosphate dikinase
OM984_26590	COG0574	Belongs to the PEP-utilizing enzyme family
OM984_26595	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM984_26610	COG5577	PFAM Coat F domain
OM984_26615	COG3403	YqcI/YcgG family
OM984_26620	COG1280	lysine exporter protein (LysE YggA)
OM984_26655	COG1063	alcohol dehydrogenase
OM984_26670	COG1027	Aspartate ammonia-lyase
OM984_26675	COG0252	asparaginase activity
OM984_26680	COG1396	sequence-specific DNA binding
OM984_26690	COG0322	excinuclease ABC activity
OM984_26695	COG0531	amino acid
OM984_26700	COG1114	Component of the transport system for branched-chain amino acids
OM984_26705	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
OM984_26715	COG0281	malic enzyme
OM984_26730	COG0531	amino acid
OM984_26740	COG0784	Response regulator, receiver
OM984_26750	COG2066	Belongs to the glutaminase family
OM984_26785	COG0737	Belongs to the 5'-nucleotidase family
OM984_26790	COG0753	catalase activity
OM984_26795	COG2267	carboxylic ester hydrolase activity
OM984_26800	COG1335	isochorismatase
OM984_26820	COG0583	DNA-binding transcription factor activity
OM984_26870	COG0415	Belongs to the DNA photolyase family
OM984_26875	COG0288	reversible hydration of carbon dioxide
OM984_26885	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OM984_26890	COG5609	conserved protein (DUF2294)
OM984_26905	COG1575	Belongs to the MenA family. Type 1 subfamily
OM984_26910	COG2267	carboxylic ester hydrolase activity
OM984_26915	COG0803	Belongs to the bacterial solute-binding protein 9 family
OM984_26920	COG1108	ABC-type Mn2 Zn2 transport systems permease components
OM984_26925	COG1121	(ABC) transporter
OM984_26955	COG0798	PFAM Bile acid sodium symporter
OM984_26960	COG0346	lactoylglutathione lyase activity
OM984_26965	COG0640	Transcriptional regulator
OM984_26980	COG0443	Heat shock 70 kDa protein
OM984_26995	COG1522	sequence-specific DNA binding
OM984_27010	COG0346	lactoylglutathione lyase activity
OM984_27030	COG2169	Transcriptional regulator
OM984_27035	COG2169	Transcriptional regulator
OM984_27080	COG2814	Major facilitator Superfamily
OM984_27105	COG0745	RESPONSE REGULATOR receiver
OM984_27110	COG5002	protein histidine kinase activity
OM984_27110	COG3850	Histidine kinase
OM984_27135	COG2515	1-aminocyclopropane-1-carboxylate deaminase
OM984_27155	COG1476	TRANSCRIPTIONal
OM984_27170	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM984_27175	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OM984_27185	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM984_27190	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
OM984_27205	COG1136	(ABC) transporter
OM984_27210	COG0577	efflux transmembrane transporter activity
OM984_27225	COG5002	protein histidine kinase activity
OM984_27225	COG3850	Histidine kinase
OM984_27235	COG2364	Membrane
OM984_27240	COG1846	Transcriptional regulator
OM984_27250	COG2808	Putative FMN-binding domain
OM984_27255	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM984_27260	COG2271	Major facilitator Superfamily
OM984_27265	COG1556	Lactate utilization protein
OM984_27270	COG1139	Iron-sulfur cluster binding protein
OM984_27280	COG0583	DNA-binding transcription factor activity
OM984_27290	COG1619	proteins homologs of microcin C7 resistance protein MccF
OM984_27310	COG0738	Major facilitator superfamily
OM984_27315	COG0673	inositol 2-dehydrogenase activity
OM984_27320	COG0561	phosphatase activity
OM984_27330	COG1609	Transcriptional regulator
OM984_27335	COG0457	Tetratricopeptide repeat
OM984_27355	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
OM984_27385	COG0534	Mate efflux family protein
OM984_27405	COG2814	Major facilitator Superfamily
OM984_27410	COG1309	transcriptional regulator
OM984_27425	COG0814	amino acid
OM984_27430	COG1760	l-serine dehydratase
OM984_27435	COG1760	l-serine dehydratase
OM984_27460	COG1393	Belongs to the ArsC family
OM984_27465	COG1733	regulation of RNA biosynthetic process
OM984_27470	COG2188	Transcriptional regulator
OM984_27480	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
OM984_27485	COG1210	Utp--glucose-1-phosphate uridylyltransferase
OM984_27505	COG0671	phosphoesterase, PA-phosphatase related
OM984_27510	COG4196	transglutaminase domain protein
OM984_27530	COG2311	Membrane
OM984_27665	COG4962	Type ii secretion system protein e
OM984_27870	COG3344	reverse transcriptase
OM984_27950	COG3344	reverse transcriptase
OM984_28055	COG0457	Tetratricopeptide repeat
OM984_28080	COG4974	Belongs to the 'phage' integrase family
OM984_28090	COG3443	Belongs to the bacterial solute-binding protein 9 family
OM984_28150	COG4974	Belongs to the 'phage' integrase family
OM984_28160	COG2002	toxin-antitoxin pair type II binding