locus-tag class description KM389_00005 PF00308 Bacterial dnaA protein KM389_00005 PF08299 Bacterial dnaA protein helix-turn-helix KM389_00005 PF11638 DnaA N-terminal domain KM389_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KM389_00010 PF02767 DNA polymerase III beta subunit, central domain KM389_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KM389_00020 PF02463 RecF/RecN/SMC N terminal domain KM389_00025 PF00204 DNA gyrase B KM389_00025 PF00986 DNA gyrase B subunit, carboxyl terminus KM389_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_00025 PF01751 Toprim domain KM389_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A KM389_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller KM389_00060 PF14175 YaaC-like Protein KM389_00065 PF00571 CBS domain KM389_00065 PF00478 IMP dehydrogenase / GMP reductase domain KM389_00070 PF07943 Penicillin-binding protein 5, C-terminal domain KM389_00070 PF00768 D-alanyl-D-alanine carboxypeptidase KM389_00075 PF01680 SOR/SNZ family KM389_00080 PF01174 SNO glutamine amidotransferase family KM389_00085 PF02403 Seryl-tRNA synthetase N-terminal domain KM389_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM389_00100 PF01712 Deoxynucleoside kinase KM389_00105 PF01712 Deoxynucleoside kinase KM389_00110 PF00857 Isochorismatase family KM389_00115 PF14437 MafB19-like deaminase KM389_00125 PF12169 DNA polymerase III subunits gamma and tau domain III KM389_00130 PF02575 YbaB/EbfC DNA-binding family KM389_00135 PF02132 RecR protein KM389_00135 PF13662 Toprim domain KM389_00140 PF10704 Protein of unknown function (DUF2508) KM389_00145 PF07441 SigmaK-factor processing regulatory protein BofA KM389_00180 PF01276 Orn/Lys/Arg decarboxylase, major domain KM389_00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM389_00185 PF02223 Thymidylate kinase KM389_00190 PF09115 DNA polymerase III, delta subunit, C terminal KM389_00195 PF04468 PSP1 C-terminal conserved region KM389_00200 PF06156 Initiation control protein YabA KM389_00205 PF05175 Methyltransferase small domain KM389_00210 PF01541 GIY-YIG catalytic domain KM389_00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM389_00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM389_00220 PF18277 AbrB C-terminal domain KM389_00225 PF08264 Anticodon-binding domain of tRNA KM389_00225 PF09334 tRNA synthetases class I (M) KM389_00225 PF01588 Putative tRNA binding domain KM389_00230 PF01026 TatD related DNase KM389_00235 PF13331 Domain of unknown function (DUF4093) KM389_00235 PF13662 Toprim domain KM389_00240 PF00398 Ribosomal RNA adenine dimethylase KM389_00245 PF05582 YabG peptidase U57 KM389_00250 PF06257 Biofilm formation stimulator VEG KM389_00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM389_00260 PF00288 GHMP kinases N terminal domain KM389_00260 PF08544 GHMP kinases C terminal KM389_00265 PF09182 Bacterial purine repressor, N-terminal KM389_00265 PF00156 Phosphoribosyl transferase domain KM389_00270 PF01042 Endoribonuclease L-PSP KM389_00275 PF04026 SpoVG KM389_00280 PF00483 Nucleotidyl transferase KM389_00280 PF00132 Bacterial transferase hexapeptide (six repeats) KM389_00285 PF14572 Phosphoribosyl synthetase-associated domain KM389_00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KM389_00290 PF01195 Peptidyl-tRNA hydrolase KM389_00300 PF02559 CarD-like/TRCF domain KM389_00300 PF00270 DEAD/DEAH box helicase KM389_00300 PF00271 Helicase conserved C-terminal domain KM389_00300 PF03461 TRCF domain KM389_00300 PF17757 UvrB interaction domain KM389_00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor KM389_00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM389_00310 PF14667 Polysaccharide biosynthesis C-terminal domain KM389_00310 PF01943 Polysaccharide biosynthesis protein KM389_00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM389_00315 PF03819 MazG nucleotide pyrophosphohydrolase domain KM389_00320 PF01479 S4 domain KM389_00325 PF07873 YabP family KM389_00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) KM389_00340 PF00575 S1 RNA binding domain KM389_00355 PF07228 Stage II sporulation protein E (SpoIIE) KM389_00360 PF11734 TilS substrate C-terminal domain KM389_00360 PF01171 PP-loop family KM389_00360 PF09179 TilS substrate binding domain KM389_00365 PF00156 Phosphoribosyl transferase domain KM389_00370 PF00004 ATPase family associated with various cellular activities (AAA) KM389_00370 PF17862 AAA+ lid domain KM389_00370 PF06480 FtsH Extracellular KM389_00370 PF01434 Peptidase family M41 KM389_00375 PF03309 Type III pantothenate kinase KM389_00380 PF01430 Hsp33 protein KM389_00385 PF00291 Pyridoxal-phosphate dependent enzyme KM389_00390 PF04715 Anthranilate synthase component I, N terminal region KM389_00390 PF00425 chorismate binding enzyme KM389_00395 PF00117 Glutamine amidotransferase class-I KM389_00400 PF01063 Amino-transferase class IV KM389_00405 PF00809 Pterin binding enzyme KM389_00410 PF02152 Dihydroneopterin aldolase KM389_00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KM389_00420 PF01381 Helix-turn-helix KM389_00425 PF01207 Dihydrouridine synthase (Dus) KM389_00430 PF01336 OB-fold nucleic acid binding domain KM389_00430 PF00152 tRNA synthetases class II (D, K and N) KM389_00450 PF17727 CtsR C-terminal dimerization domain KM389_00450 PF05848 CtsR N-terminal HTH domain KM389_00455 PF02151 UvrB/uvrC motif KM389_00460 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KM389_00465 PF00004 ATPase family associated with various cellular activities (AAA) KM389_00465 PF07724 AAA domain (Cdc48 subfamily) KM389_00465 PF10431 C-terminal, D2-small domain, of ClpB protein KM389_00465 PF17871 AAA lid domain KM389_00465 PF02861 Clp amino terminal domain, pathogenicity island component KM389_00470 PF18073 Rubredoxin metal binding domain KM389_00475 PF10635 DisA bacterial checkpoint controller linker region KM389_00475 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM389_00485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KM389_00490 PF02542 YgbB family KM389_00495 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM389_00500 PF06426 Serine acetyltransferase, N-terminal KM389_00500 PF00132 Bacterial transferase hexapeptide (six repeats) KM389_00505 PF09190 DALR domain KM389_00505 PF01406 tRNA synthetases class I (C) catalytic domain KM389_00510 PF00636 Ribonuclease III domain KM389_00515 PF00588 SpoU rRNA Methylase family KM389_00515 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM389_00520 PF05991 YacP-like NYN domain KM389_00525 PF08281 Sigma-70, region 4 KM389_00525 PF04542 Sigma-70 region 2 KM389_00530 PF00471 Ribosomal protein L33 KM389_00535 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KM389_00540 PF00467 KOW motif KM389_00540 PF02357 Transcription termination factor nusG KM389_00545 PF00298 Ribosomal protein L11, RNA binding domain KM389_00545 PF03946 Ribosomal protein L11, N-terminal domain KM389_00550 PF00687 Ribosomal protein L1p/L10e family KM389_00555 PF00466 Ribosomal protein L10 KM389_00560 PF16320 Ribosomal protein L7/L12 dimerisation domain KM389_00560 PF00542 Ribosomal protein L7/L12 C-terminal domain KM389_00565 PF05175 Methyltransferase small domain KM389_00570 PF04560 RNA polymerase Rpb2, domain 7 KM389_00570 PF00562 RNA polymerase Rpb2, domain 6 KM389_00570 PF10385 RNA polymerase beta subunit external 1 domain KM389_00570 PF04565 RNA polymerase Rpb2, domain 3 KM389_00570 PF04561 RNA polymerase Rpb2, domain 2 KM389_00570 PF04563 RNA polymerase beta subunit KM389_00575 PF05000 RNA polymerase Rpb1, domain 4 KM389_00575 PF04983 RNA polymerase Rpb1, domain 3 KM389_00575 PF00623 RNA polymerase Rpb1, domain 2 KM389_00575 PF04998 RNA polymerase Rpb1, domain 5 KM389_00575 PF04997 RNA polymerase Rpb1, domain 1 KM389_00580 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM389_00585 PF00164 Ribosomal protein S12/S23 KM389_00590 PF00177 Ribosomal protein S7p/S5e KM389_00595 PF03144 Elongation factor Tu domain 2 KM389_00595 PF00009 Elongation factor Tu GTP binding domain KM389_00595 PF03764 Elongation factor G, domain IV KM389_00595 PF14492 Elongation Factor G, domain II KM389_00595 PF00679 Elongation factor G C-terminus KM389_00600 PF03143 Elongation factor Tu C-terminal domain KM389_00600 PF03144 Elongation factor Tu domain 2 KM389_00600 PF00009 Elongation factor Tu GTP binding domain KM389_00605 PF00338 Ribosomal protein S10p/S20e KM389_00610 PF00297 Ribosomal protein L3 KM389_00615 PF00573 Ribosomal protein L4/L1 family KM389_00620 PF00276 Ribosomal protein L23 KM389_00625 PF00181 Ribosomal Proteins L2, RNA binding domain KM389_00625 PF03947 Ribosomal Proteins L2, C-terminal domain KM389_00630 PF00203 Ribosomal protein S19 KM389_00635 PF00237 Ribosomal protein L22p/L17e KM389_00640 PF07650 KH domain KM389_00640 PF00189 Ribosomal protein S3, C-terminal domain KM389_00645 PF00252 Ribosomal protein L16p/L10e KM389_00650 PF00831 Ribosomal L29 protein KM389_00655 PF00366 Ribosomal protein S17 KM389_00660 PF00238 Ribosomal protein L14p/L23e KM389_00665 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KM389_00665 PF00467 KOW motif KM389_00670 PF00673 ribosomal L5P family C-terminus KM389_00670 PF00281 Ribosomal protein L5 KM389_00675 PF00253 Ribosomal protein S14p/S29e KM389_00680 PF00410 Ribosomal protein S8 KM389_00685 PF00347 Ribosomal protein L6 KM389_00690 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KM389_00695 PF03719 Ribosomal protein S5, C-terminal domain KM389_00695 PF00333 Ribosomal protein S5, N-terminal domain KM389_00700 PF00327 Ribosomal protein L30p/L7e KM389_00705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KM389_00710 PF00344 SecY translocase KM389_00715 PF05191 Adenylate kinase, active site lid KM389_00720 PF00557 Metallopeptidase family M24 KM389_00725 PF01176 Translation initiation factor 1A / IF-1 KM389_00730 PF00444 Ribosomal protein L36 KM389_00735 PF00416 Ribosomal protein S13/S18 KM389_00740 PF00411 Ribosomal protein S11 KM389_00745 PF01000 RNA polymerase Rpb3/RpoA insert domain KM389_00745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KM389_00745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KM389_00750 PF01196 Ribosomal protein L17 KM389_00755 PF00005 ABC transporter KM389_00760 PF00005 ABC transporter KM389_00765 PF02361 Cobalt transport protein KM389_00770 PF01416 tRNA pseudouridine synthase KM389_00775 PF00572 Ribosomal protein L13 KM389_00780 PF00380 Ribosomal protein S9/S16 KM389_00790 PF01520 N-acetylmuramoyl-L-alanine amidase KM389_00795 PF10609 NUBPL iron-transfer P-loop NTPase KM389_00800 PF17898 Spore germination GerD central core domain KM389_00805 PF14089 KinB-signalling pathway activation in sporulation KM389_00810 PF01522 Polysaccharide deacetylase KM389_00885 PF00491 Arginase family KM389_00890 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM389_00895 PF07949 YbbR-like protein KM389_00900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM389_00900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM389_00900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM389_00900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM389_00910 PF01380 SIS domain KM389_00915 PF00561 alpha/beta hydrolase fold KM389_00920 PF00392 Bacterial regulatory proteins, gntR family KM389_00920 PF07729 FCD domain KM389_00930 PF02447 GntP family permease KM389_00935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM389_00935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM389_00940 PF00326 Prolyl oligopeptidase family KM389_00940 PF07676 WD40-like Beta Propeller Repeat KM389_00975 PF00528 Binding-protein-dependent transport system inner membrane component KM389_00980 PF00005 ABC transporter KM389_00980 PF09383 NIL domain KM389_00985 PF03180 NLPA lipoprotein KM389_00990 PF08240 Alcohol dehydrogenase GroES-like domain KM389_00990 PF00107 Zinc-binding dehydrogenase KM389_01000 PF01565 FAD binding domain KM389_01005 PF07690 Major Facilitator Superfamily KM389_01015 PF07690 Major Facilitator Superfamily KM389_01030 PF00528 Binding-protein-dependent transport system inner membrane component KM389_01035 PF12911 N-terminal TM domain of oligopeptide transport permease C KM389_01035 PF00528 Binding-protein-dependent transport system inner membrane component KM389_01040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM389_01040 PF00005 ABC transporter KM389_01045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM389_01045 PF00005 ABC transporter KM389_01050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_01060 PF12833 Helix-turn-helix domain KM389_01075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_01080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_01085 PF00248 Aldo/keto reductase family KM389_01090 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM389_01090 PF03807 NADP oxidoreductase coenzyme F420-dependent KM389_01095 PF04973 Nicotinamide mononucleotide transporter KM389_01100 PF06800 Sugar transport protein KM389_01105 PF00528 Binding-protein-dependent transport system inner membrane component KM389_01115 PF12727 PBP superfamily domain KM389_01115 PF12728 Helix-turn-helix domain KM389_01125 PF03466 LysR substrate binding domain KM389_01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM389_01130 PF00892 EamA-like transporter family KM389_01135 PF14142 YrzO-like protein KM389_01145 PF01553 Acyltransferase KM389_01155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM389_01155 PF00356 Bacterial regulatory proteins, lacI family KM389_01165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM389_01165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM389_01175 PF01026 TatD related DNase KM389_01180 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KM389_01205 PF12848 ABC transporter KM389_01205 PF16326 ABC transporter C-terminal domain KM389_01205 PF00005 ABC transporter KM389_01220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_01225 PF00528 Binding-protein-dependent transport system inner membrane component KM389_01230 PF12911 N-terminal TM domain of oligopeptide transport permease C KM389_01230 PF00528 Binding-protein-dependent transport system inner membrane component KM389_01235 PF00005 ABC transporter KM389_01235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM389_01240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM389_01240 PF00005 ABC transporter KM389_01275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM389_01280 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM389_01290 PF07690 Major Facilitator Superfamily KM389_01300 PF08245 Mur ligase middle domain KM389_01300 PF02875 Mur ligase family, glutamate ligase domain KM389_01300 PF01225 Mur ligase family, catalytic domain KM389_01305 PF00271 Helicase conserved C-terminal domain KM389_01305 PF00270 DEAD/DEAH box helicase KM389_01310 PF03851 UV-endonuclease UvdE KM389_01315 PF01694 Rhomboid family KM389_01320 PF01648 4'-phosphopantetheinyl transferase superfamily KM389_01330 PF00842 Alanine racemase, C-terminal domain KM389_01330 PF01168 Alanine racemase, N-terminal domain KM389_01335 PF01402 Ribbon-helix-helix protein, copG family KM389_01340 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KM389_01345 PF17674 HHH domain KM389_01345 PF16921 Tex protein YqgF-like domain KM389_01345 PF09371 Tex-like protein N-terminal domain KM389_01345 PF00575 S1 RNA binding domain KM389_01355 PF17283 SprT-like zinc ribbon domain KM389_01355 PF10263 SprT-like family KM389_01440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KM389_01445 PF00814 Glycoprotease family KM389_01450 PF00583 Acetyltransferase (GNAT) family KM389_01455 PF00814 Glycoprotease family KM389_01460 PF12848 ABC transporter KM389_01460 PF16326 ABC transporter C-terminal domain KM389_01460 PF00005 ABC transporter KM389_01465 PF06971 Putative DNA-binding protein N-terminus KM389_01465 PF02629 CoA binding domain KM389_01475 PF02517 CPBP intramembrane metalloprotease KM389_01480 PF00166 Chaperonin 10 Kd subunit KM389_01485 PF00118 TCP-1/cpn60 chaperonin family KM389_01490 PF00117 Glutamine amidotransferase class-I KM389_01490 PF02540 NAD synthase KM389_01490 PF00958 GMP synthase C terminal domain KM389_01495 PF00860 Permease family KM389_01500 PF00072 Response regulator receiver domain KM389_01500 PF00486 Transcriptional regulatory protein, C terminal KM389_01505 PF00512 His Kinase A (phospho-acceptor) domain KM389_01505 PF00989 PAS fold KM389_01505 PF16736 Single Cache-like KM389_01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_01525 PF00731 AIR carboxylase KM389_01530 PF02222 ATP-grasp domain KM389_01530 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KM389_01535 PF00206 Lyase KM389_01535 PF10397 Adenylosuccinate lyase C-terminus KM389_01540 PF01259 SAICAR synthetase KM389_01545 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KM389_01555 PF00586 AIR synthase related protein, N-terminal domain KM389_01555 PF02769 AIR synthase related protein, C-terminal domain KM389_01555 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KM389_01560 PF00156 Phosphoribosyl transferase domain KM389_01565 PF00586 AIR synthase related protein, N-terminal domain KM389_01565 PF02769 AIR synthase related protein, C-terminal domain KM389_01570 PF00551 Formyl transferase KM389_01575 PF01808 AICARFT/IMPCHase bienzyme KM389_01575 PF02142 MGS-like domain KM389_01580 PF02844 Phosphoribosylglycinamide synthetase, N domain KM389_01580 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KM389_01580 PF02843 Phosphoribosylglycinamide synthetase, C domain KM389_01600 PF01884 PcrB family KM389_01605 PF00580 UvrD/REP helicase N-terminal domain KM389_01605 PF13361 UvrD-like helicase C-terminal domain KM389_01610 PF01653 NAD-dependent DNA ligase adenylation domain KM389_01610 PF00533 BRCA1 C Terminus (BRCT) domain KM389_01610 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KM389_01610 PF12826 Helix-hairpin-helix motif KM389_01610 PF03120 NAD-dependent DNA ligase OB-fold domain KM389_01615 PF07537 CamS sex pheromone cAM373 precursor KM389_01620 PF01925 Sulfite exporter TauE/SafE KM389_01625 PF00171 Aldehyde dehydrogenase family KM389_01635 PF00857 Isochorismatase family KM389_01640 PF00005 ABC transporter KM389_01640 PF09383 NIL domain KM389_01645 PF00528 Binding-protein-dependent transport system inner membrane component KM389_01650 PF03180 NLPA lipoprotein KM389_01670 PF01047 MarR family KM389_01680 PF02686 Glu-tRNAGln amidotransferase C subunit KM389_01685 PF01425 Amidase KM389_01690 PF02934 GatB/GatE catalytic domain KM389_01690 PF02637 GatB domain KM389_01695 PF00781 Diacylglycerol kinase catalytic domain KM389_01700 PF13419 Haloacid dehalogenase-like hydrolase KM389_01705 PF00202 Aminotransferase class-III KM389_01710 PF00158 Sigma-54 interaction domain KM389_01715 PF00171 Aldehyde dehydrogenase family KM389_01720 PF00893 Small Multidrug Resistance protein KM389_01725 PF02073 Thermophilic metalloprotease (M29) KM389_01740 PF07670 Nucleoside recognition KM389_01740 PF07662 Na+ dependent nucleoside transporter C-terminus KM389_01740 PF01773 Na+ dependent nucleoside transporter N-terminus KM389_01745 PF02475 Met-10+ like-protein KM389_01745 PF01938 TRAM domain KM389_01745 PF05958 tRNA (Uracil-5-)-methyltransferase KM389_01750 PF01207 Dihydrouridine synthase (Dus) KM389_01760 PF07308 Protein of unknown function (DUF1456) KM389_01775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM389_01775 PF13378 Enolase C-terminal domain-like KM389_01785 PF03553 Na+/H+ antiporter family KM389_01790 PF07687 Peptidase dimerisation domain KM389_01790 PF01546 Peptidase family M20/M25/M40 KM389_01800 PF13192 Thioredoxin domain KM389_01800 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_01805 PF00578 AhpC/TSA family KM389_01810 PF01636 Phosphotransferase enzyme family KM389_01815 PF01008 Initiation factor 2 subunit family KM389_01820 PF00596 Class II Aldolase and Adducin N-terminal domain KM389_01825 PF01032 FecCD transport family KM389_01830 PF01032 FecCD transport family KM389_01835 PF01497 Periplasmic binding protein KM389_01840 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_01850 PF12728 Helix-turn-helix domain KM389_01885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_01885 PF00989 PAS fold KM389_01885 PF13188 PAS domain KM389_01885 PF13426 PAS domain KM389_01885 PF00512 His Kinase A (phospho-acceptor) domain KM389_01905 PF10127 RNA repair pathway DNA polymerase beta family KM389_01910 PF07690 Major Facilitator Superfamily KM389_01915 PF01266 FAD dependent oxidoreductase KM389_01915 PF00355 Rieske [2Fe-2S] domain KM389_01925 PF00528 Binding-protein-dependent transport system inner membrane component KM389_01930 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM389_01935 PF00005 ABC transporter KM389_01940 PF12729 Four helix bundle sensory module for signal transduction KM389_01940 PF00672 HAMP domain KM389_01940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM389_01945 PF12729 Four helix bundle sensory module for signal transduction KM389_01945 PF00672 HAMP domain KM389_01945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM389_01950 PF00128 Alpha amylase, catalytic domain KM389_01950 PF16657 Maltogenic Amylase, C-terminal domain KM389_01955 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM389_01955 PF00367 phosphotransferase system, EIIB KM389_01955 PF02378 Phosphotransferase system, EIIC KM389_01960 PF03372 Endonuclease/Exonuclease/phosphatase family KM389_01965 PF01061 ABC-2 type transporter KM389_01970 PF01751 Toprim domain KM389_01970 PF01131 DNA topoisomerase KM389_01975 PF02110 Hydroxyethylthiazole kinase family KM389_01980 PF02581 Thiamine monophosphate synthase KM389_01985 PF03605 Anaerobic c4-dicarboxylate membrane transporter KM389_01990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM389_01990 PF00672 HAMP domain KM389_01995 PF01910 Thiamine-binding protein KM389_02000 PF00528 Binding-protein-dependent transport system inner membrane component KM389_02010 PF00005 ABC transporter KM389_02015 PF00005 ABC transporter KM389_02015 PF12848 ABC transporter KM389_02020 PF00041 Fibronectin type III domain KM389_02020 PF00704 Glycosyl hydrolases family 18 KM389_02040 PF08360 QacR-like protein, C-terminal region KM389_02040 PF00440 Bacterial regulatory proteins, tetR family KM389_02060 PF11700 Vacuole effluxer Atg22 like KM389_02075 PF09180 Prolyl-tRNA synthetase, C-terminal KM389_02075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM389_02075 PF03129 Anticodon binding domain KM389_02085 PF00480 ROK family KM389_02090 PF02342 TerD domain KM389_02095 PF02342 TerD domain KM389_02100 PF02342 TerD domain KM389_02105 PF03741 Integral membrane protein TerC family KM389_02110 PF14266 Putative component of 'biosynthetic module' KM389_02115 PF05816 Toxic anion resistance protein (TelA) KM389_02120 PF00690 Cation transporter/ATPase, N-terminus KM389_02120 PF00689 Cation transporting ATPase, C-terminus KM389_02125 PF06569 Protein of unknown function (DUF1128) KM389_02130 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM389_02140 PF03631 Virulence factor BrkB KM389_02150 PF00892 EamA-like transporter family KM389_02170 PF09335 SNARE associated Golgi protein KM389_02185 PF16242 Pyridoxamine 5'-phosphate oxidase like KM389_02190 PF01699 Sodium/calcium exchanger protein KM389_02195 PF14167 YfkD-like protein KM389_02200 PF04055 Radical SAM superfamily KM389_02200 PF08756 YfkB-like domain KM389_02210 PF05681 Fumarate hydratase (Fumerase) KM389_02210 PF05683 Fumarase C-terminus KM389_02215 PF01522 Polysaccharide deacetylase KM389_02225 PF00730 HhH-GPD superfamily base excision DNA repair protein KM389_02230 PF05958 tRNA (Uracil-5-)-methyltransferase KM389_02230 PF01938 TRAM domain KM389_02235 PF14659 Phage integrase, N-terminal SAM-like domain KM389_02235 PF00589 Phage integrase family KM389_02245 PF01381 Helix-turn-helix KM389_02260 PF01381 Helix-turn-helix KM389_02295 PF01695 IstB-like ATP binding protein KM389_02295 PF07319 Primosomal protein DnaI N-terminus KM389_02515 PF01183 Glycosyl hydrolases family 25 KM389_02525 PF01416 tRNA pseudouridine synthase KM389_02535 PF02954 Bacterial regulatory protein, Fis family KM389_02535 PF00158 Sigma-54 interaction domain KM389_02535 PF13426 PAS domain KM389_02545 PF00324 Amino acid permease KM389_02550 PF07687 Peptidase dimerisation domain KM389_02550 PF01546 Peptidase family M20/M25/M40 KM389_02575 PF04960 Glutaminase KM389_02580 PF00367 phosphotransferase system, EIIB KM389_02580 PF02378 Phosphotransferase system, EIIC KM389_02585 PF00144 Beta-lactamase KM389_02600 PF00535 Glycosyl transferase family 2 KM389_02605 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM389_02605 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM389_02605 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM389_02610 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM389_02610 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM389_02610 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM389_02615 PF02911 Formyl transferase, C-terminal domain KM389_02615 PF00551 Formyl transferase KM389_02615 PF01370 NAD dependent epimerase/dehydratase family KM389_02620 PF00535 Glycosyl transferase family 2 KM389_02630 PF01228 Glycine radical KM389_02630 PF02901 Pyruvate formate lyase-like KM389_02635 PF04055 Radical SAM superfamily KM389_02640 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KM389_02640 PF04101 Glycosyltransferase family 28 C-terminal domain KM389_02655 PF01979 Amidohydrolase family KM389_02660 PF01370 NAD dependent epimerase/dehydratase family KM389_02660 PF08338 Domain of unknown function (DUF1731) KM389_02665 PF02631 RecX family KM389_02680 PF08176 Small acid-soluble spore protein K family KM389_02685 PF14043 WVELL protein KM389_02690 PF04307 LexA-binding, inner membrane-associated putative hydrolase KM389_02695 PF00730 HhH-GPD superfamily base excision DNA repair protein KM389_02695 PF14815 NUDIX domain KM389_02705 PF04259 Small, acid-soluble spore protein, gamma-type KM389_02710 PF14182 YgaB-like protein KM389_02715 PF04167 Protein of unknown function (DUF402) KM389_02720 PF00005 ABC transporter KM389_02720 PF00664 ABC transporter transmembrane region KM389_02725 PF06081 Aromatic acid exporter family member 1 KM389_02730 PF01493 GXGXG motif KM389_02730 PF01645 Conserved region in glutamate synthase KM389_02730 PF04898 Glutamate synthase central domain KM389_02730 PF00310 Glutamine amidotransferases class-II KM389_02735 PF00202 Aminotransferase class-III KM389_02740 PF00005 ABC transporter KM389_02755 PF07885 Ion channel KM389_02760 PF00578 AhpC/TSA family KM389_02765 PF01475 Ferric uptake regulator family KM389_02770 PF11023 Zinc-ribbon containing domain KM389_02870 PF01709 Transcriptional regulator KM389_02875 PF00293 NUDIX domain KM389_02875 PF13344 Haloacid dehalogenase-like hydrolase KM389_02880 PF00905 Penicillin binding protein transpeptidase domain KM389_02880 PF00912 Transglycosylase KM389_02885 PF13462 Thioredoxin KM389_02895 PF08331 Domain of unknown function (DUF1730) KM389_02900 PF12671 Putative amidase domain KM389_02905 PF00588 SpoU rRNA Methylase family KM389_02910 PF03707 Bacterial signalling protein N terminal repeat KM389_02910 PF00563 EAL domain KM389_02910 PF00990 Diguanylate cyclase, GGDEF domain KM389_02915 PF08298 PrkA AAA domain KM389_02915 PF06798 PrkA serine protein kinase C-terminal domain KM389_02920 PF04285 Protein of unknown function (DUF444) KM389_02935 PF02028 BCCT, betaine/carnitine/choline family transporter KM389_02940 PF08453 Peptidase family M9 N-terminal KM389_02940 PF01752 Collagenase KM389_02940 PF18496 Collagenase G catalytic helper subdomain KM389_02950 PF01145 SPFH domain / Band 7 family KM389_02950 PF15975 Flotillin KM389_02955 PF02743 Cache domain KM389_02955 PF00672 HAMP domain KM389_02955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM389_02960 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM389_02960 PF17203 Single cache domain 3 KM389_02960 PF00989 PAS fold KM389_02960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_02965 PF12431 Transcriptional regulator KM389_02965 PF08279 HTH domain KM389_02965 PF00072 Response regulator receiver domain KM389_02970 PF03600 Citrate transporter KM389_02990 PF04309 Glycerol-3-phosphate responsive antiterminator KM389_02995 PF00005 ABC transporter KM389_02995 PF17912 MalK OB fold domain KM389_03000 PF00528 Binding-protein-dependent transport system inner membrane component KM389_03005 PF00528 Binding-protein-dependent transport system inner membrane component KM389_03010 PF13416 Bacterial extracellular solute-binding protein KM389_03015 PF00149 Calcineurin-like phosphoesterase KM389_03020 PF00072 Response regulator receiver domain KM389_03020 PF00486 Transcriptional regulatory protein, C terminal KM389_03025 PF00512 His Kinase A (phospho-acceptor) domain KM389_03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_03035 PF13529 Peptidase_C39 like family KM389_03040 PF00672 HAMP domain KM389_03040 PF02743 Cache domain KM389_03040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM389_03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_03045 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM389_03045 PF00989 PAS fold KM389_03045 PF17203 Single cache domain 3 KM389_03050 PF00072 Response regulator receiver domain KM389_03055 PF03390 2-hydroxycarboxylate transporter family KM389_03060 PF03949 Malic enzyme, NAD binding domain KM389_03060 PF00390 Malic enzyme, N-terminal domain KM389_03070 PF00892 EamA-like transporter family KM389_03075 PF00392 Bacterial regulatory proteins, gntR family KM389_03075 PF00155 Aminotransferase class I and II KM389_03085 PF00672 HAMP domain KM389_03085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_03085 PF00989 PAS fold KM389_03085 PF00512 His Kinase A (phospho-acceptor) domain KM389_03085 PF18698 Histidine kinase sensor domain KM389_03090 PF00072 Response regulator receiver domain KM389_03090 PF00486 Transcriptional regulatory protein, C terminal KM389_03095 PF13508 Acetyltransferase (GNAT) domain KM389_03095 PF00583 Acetyltransferase (GNAT) family KM389_03100 PF02634 FdhD/NarQ family KM389_03105 PF00384 Molybdopterin oxidoreductase KM389_03105 PF01568 Molydopterin dinucleotide binding domain KM389_03105 PF00037 4Fe-4S binding domain KM389_03105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM389_03105 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM389_03110 PF07849 Protein of unknown function (DUF1641) KM389_03120 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM389_03120 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM389_03125 PF13520 Amino acid permease KM389_03130 PF01022 Bacterial regulatory protein, arsR family KM389_03135 PF00403 Heavy-metal-associated domain KM389_03140 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KM389_03140 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KM389_03140 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KM389_03155 PF07504 Fungalysin/Thermolysin Propeptide Motif KM389_03155 PF03413 Peptidase propeptide and YPEB domain KM389_03155 PF01447 Thermolysin metallopeptidase, catalytic domain KM389_03155 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM389_03175 PF04294 VanW like protein KM389_03180 PF03816 Cell envelope-related transcriptional attenuator domain KM389_03185 PF07662 Na+ dependent nucleoside transporter C-terminus KM389_03185 PF01773 Na+ dependent nucleoside transporter N-terminus KM389_03190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM389_03195 PF00571 CBS domain KM389_03195 PF03471 Transporter associated domain KM389_03195 PF01595 Cyclin M transmembrane N-terminal domain KM389_03200 PF00206 Lyase KM389_03200 PF10415 Fumarase C C-terminus KM389_03205 PF02652 L-lactate permease KM389_03210 PF01022 Bacterial regulatory protein, arsR family KM389_03215 PF08141 Small acid-soluble spore protein H family KM389_03220 PF00854 POT family KM389_03225 PF01497 Periplasmic binding protein KM389_03230 PF01032 FecCD transport family KM389_03235 PF01032 FecCD transport family KM389_03240 PF00005 ABC transporter KM389_03245 PF08241 Methyltransferase domain KM389_03250 PF00155 Aminotransferase class I and II KM389_03255 PF01370 NAD dependent epimerase/dehydratase family KM389_03260 PF00293 NUDIX domain KM389_03260 PF13344 Haloacid dehalogenase-like hydrolase KM389_03265 PF00092 von Willebrand factor type A domain KM389_03270 PF07728 AAA domain (dynein-related subfamily) KM389_03275 PF13396 Phospholipase_D-nuclease N-terminal KM389_03275 PF13091 PLD-like domain KM389_03290 PF03707 Bacterial signalling protein N terminal repeat KM389_03290 PF00990 Diguanylate cyclase, GGDEF domain KM389_03290 PF00563 EAL domain KM389_03295 PF13520 Amino acid permease KM389_03300 PF00392 Bacterial regulatory proteins, gntR family KM389_03300 PF07702 UTRA domain KM389_03305 PF00367 phosphotransferase system, EIIB KM389_03305 PF02378 Phosphotransferase system, EIIC KM389_03310 PF16657 Maltogenic Amylase, C-terminal domain KM389_03310 PF00128 Alpha amylase, catalytic domain KM389_03325 PF03323 Bacillus/Clostridium GerA spore germination protein KM389_03335 PF01636 Phosphotransferase enzyme family KM389_03340 PF01235 Sodium:alanine symporter family KM389_03345 PF00005 ABC transporter KM389_03350 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM389_03355 PF00528 Binding-protein-dependent transport system inner membrane component KM389_03360 PF00528 Binding-protein-dependent transport system inner membrane component KM389_03365 PF00324 Amino acid permease KM389_03390 PF08279 HTH domain KM389_03390 PF13280 WYL domain KM389_03395 PF01872 RibD C-terminal domain KM389_03400 PF00512 His Kinase A (phospho-acceptor) domain KM389_03400 PF18698 Histidine kinase sensor domain KM389_03400 PF00989 PAS fold KM389_03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_03400 PF00672 HAMP domain KM389_03405 PF00486 Transcriptional regulatory protein, C terminal KM389_03405 PF00072 Response regulator receiver domain KM389_03415 PF00916 Sulfate permease family KM389_03415 PF01740 STAS domain KM389_03420 PF00582 Universal stress protein family KM389_03430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_03435 PF00528 Binding-protein-dependent transport system inner membrane component KM389_03440 PF00528 Binding-protein-dependent transport system inner membrane component KM389_03445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM389_03445 PF00005 ABC transporter KM389_03450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM389_03450 PF00005 ABC transporter KM389_03455 PF07690 Major Facilitator Superfamily KM389_03460 PF01047 MarR family KM389_03470 PF00356 Bacterial regulatory proteins, lacI family KM389_03475 PF00294 pfkB family carbohydrate kinase KM389_03480 PF05025 RbsD / FucU transport protein family KM389_03485 PF00005 ABC transporter KM389_03490 PF02653 Branched-chain amino acid transport system / permease component KM389_03495 PF13407 Periplasmic binding protein domain KM389_03500 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM389_03505 PF05547 Immune inhibitor A peptidase M6 KM389_03520 PF08240 Alcohol dehydrogenase GroES-like domain KM389_03520 PF00107 Zinc-binding dehydrogenase KM389_03530 PF00882 Zinc dependent phospholipase C KM389_03535 PF03372 Endonuclease/Exonuclease/phosphatase family KM389_03560 PF02673 Bacitracin resistance protein BacA KM389_03565 PF02743 Cache domain KM389_03565 PF00672 HAMP domain KM389_03565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM389_03570 PF06725 3D domain KM389_03570 PF01476 LysM domain KM389_03575 PF01381 Helix-turn-helix KM389_03585 PF04203 Sortase domain KM389_03590 PF00854 POT family KM389_03595 PF05525 Branched-chain amino acid transport protein KM389_03610 PF00324 Amino acid permease KM389_03615 PF00860 Permease family KM389_03640 PF02254 TrkA-N domain KM389_03640 PF00999 Sodium/hydrogen exchanger family KM389_03640 PF02080 TrkA-C domain KM389_03650 PF00510 Cytochrome c oxidase subunit III KM389_03655 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM389_03660 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM389_03665 PF00324 Amino acid permease KM389_03670 PF13529 Peptidase_C39 like family KM389_03675 PF07687 Peptidase dimerisation domain KM389_03675 PF01546 Peptidase family M20/M25/M40 KM389_03680 PF11755 Protein of unknown function (DUF3311) KM389_03685 PF00474 Sodium:solute symporter family KM389_03690 PF03323 Bacillus/Clostridium GerA spore germination protein KM389_03695 PF03845 Spore germination protein KM389_03700 PF05504 Spore germination B3/ GerAC like, C-terminal KM389_03705 PF17910 FeoB cytosolic helical domain KM389_03705 PF07664 Ferrous iron transport protein B C terminus KM389_03705 PF07670 Nucleoside recognition KM389_03705 PF02421 Ferrous iron transport protein B KM389_03710 PF07664 Ferrous iron transport protein B C terminus KM389_03710 PF17910 FeoB cytosolic helical domain KM389_03710 PF02421 Ferrous iron transport protein B KM389_03710 PF07670 Nucleoside recognition KM389_03715 PF17910 FeoB cytosolic helical domain KM389_03715 PF07670 Nucleoside recognition KM389_03715 PF02421 Ferrous iron transport protein B KM389_03715 PF04023 FeoA domain KM389_03715 PF07664 Ferrous iron transport protein B C terminus KM389_03720 PF12849 PBP superfamily domain KM389_03725 PF00528 Binding-protein-dependent transport system inner membrane component KM389_03730 PF00528 Binding-protein-dependent transport system inner membrane component KM389_03740 PF00873 AcrB/AcrD/AcrF family KM389_03860 PF00571 CBS domain KM389_03875 PF00246 Zinc carboxypeptidase KM389_03875 PF08239 Bacterial SH3 domain KM389_03880 PF03070 TENA/THI-4/PQQC family KM389_03885 PF00005 ABC transporter KM389_03890 PF00528 Binding-protein-dependent transport system inner membrane component KM389_03895 PF09084 NMT1/THI5 like KM389_03900 PF02581 Thiamine monophosphate synthase KM389_03905 PF01266 FAD dependent oxidoreductase KM389_03910 PF02597 ThiS family KM389_03915 PF05690 Thiazole biosynthesis protein ThiG KM389_03920 PF00899 ThiF family KM389_03925 PF08543 Phosphomethylpyrimidine kinase KM389_03950 PF03814 Potassium-transporting ATPase A subunit KM389_03960 PF02669 K+-transporting ATPase, c chain KM389_03965 PF02702 Osmosensitive K+ channel His kinase sensor domain KM389_03970 PF07690 Major Facilitator Superfamily KM389_03975 PF01047 MarR family KM389_03990 PF00860 Permease family KM389_04010 PF00294 pfkB family carbohydrate kinase KM389_04015 PF00251 Glycosyl hydrolases family 32 N-terminal domain KM389_04015 PF08244 Glycosyl hydrolases family 32 C terminal KM389_04020 PF00367 phosphotransferase system, EIIB KM389_04020 PF02378 Phosphotransferase system, EIIC KM389_04025 PF00356 Bacterial regulatory proteins, lacI family KM389_04025 PF13407 Periplasmic binding protein domain KM389_04035 PF00085 Thioredoxin KM389_04040 PF02600 Disulfide bond formation protein DsbB KM389_04045 PF14148 YhdB-like protein KM389_04065 PF03323 Bacillus/Clostridium GerA spore germination protein KM389_04075 PF00881 Nitroreductase family KM389_04080 PF04293 SpoVR like protein KM389_04105 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_04105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM389_04110 PF02583 Metal-sensitive transcriptional repressor KM389_04115 PF00581 Rhodanese-like domain KM389_04115 PF01206 Sulfurtransferase TusA KM389_04120 PF00753 Metallo-beta-lactamase superfamily KM389_04120 PF00581 Rhodanese-like domain KM389_04125 PF01206 Sulfurtransferase TusA KM389_04130 PF00581 Rhodanese-like domain KM389_04140 PF13686 DsrE/DsrF/DrsH-like family KM389_04145 PF01925 Sulfite exporter TauE/SafE KM389_04155 PF03816 Cell envelope-related transcriptional attenuator domain KM389_04160 PF08240 Alcohol dehydrogenase GroES-like domain KM389_04160 PF00107 Zinc-binding dehydrogenase KM389_04165 PF02690 Na+/Pi-cotransporter KM389_04170 PF07690 Major Facilitator Superfamily KM389_04180 PF08279 HTH domain KM389_04180 PF05043 Mga helix-turn-helix domain KM389_04180 PF00874 PRD domain KM389_04180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM389_04185 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM389_04190 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM389_04195 PF02378 Phosphotransferase system, EIIC KM389_04210 PF06725 3D domain KM389_04210 PF01476 LysM domain KM389_04215 PF02687 FtsX-like permease family KM389_04215 PF12704 MacB-like periplasmic core domain KM389_04220 PF00005 ABC transporter KM389_04230 PF09529 Integral membrane protein (intg_mem_TP0381) KM389_04245 PF05525 Branched-chain amino acid transport protein KM389_04250 PF05067 Manganese containing catalase KM389_04255 PF12652 CotJB protein KM389_04260 PF11007 Spore coat associated protein JA (CotJA) KM389_04275 PF02735 Ku70/Ku80 beta-barrel domain KM389_04285 PF09335 SNARE associated Golgi protein KM389_04320 PF13520 Amino acid permease KM389_04325 PF00999 Sodium/hydrogen exchanger family KM389_04335 PF01418 Helix-turn-helix domain, rpiR family KM389_04335 PF01380 SIS domain KM389_04340 PF01380 SIS domain KM389_04345 PF00367 phosphotransferase system, EIIB KM389_04345 PF02378 Phosphotransferase system, EIIC KM389_04355 PF07681 DoxX KM389_04370 PF00892 EamA-like transporter family KM389_04375 PF01037 Lrp/AsnC ligand binding domain KM389_04385 PF00893 Small Multidrug Resistance protein KM389_04390 PF00893 Small Multidrug Resistance protein KM389_04395 PF17934 Tetracyclin repressor-like, C-terminal domain KM389_04395 PF00440 Bacterial regulatory proteins, tetR family KM389_04400 PF07690 Major Facilitator Superfamily KM389_04405 PF01638 HxlR-like helix-turn-helix KM389_04415 PF02525 Flavodoxin-like fold KM389_04420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_04420 PF12793 Sugar transport-related sRNA regulator N-term KM389_04425 PF07690 Major Facilitator Superfamily KM389_04435 PF01965 DJ-1/PfpI family KM389_04440 PF00199 Catalase KM389_04440 PF06628 Catalase-related immune-responsive KM389_04440 PF18011 C-terminal domain found in long catalases KM389_04450 PF13520 Amino acid permease KM389_04455 PF01177 Asp/Glu/Hydantoin racemase KM389_04465 PF00171 Aldehyde dehydrogenase family KM389_04470 PF00664 ABC transporter transmembrane region KM389_04470 PF00005 ABC transporter KM389_04480 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM389_04485 PF00528 Binding-protein-dependent transport system inner membrane component KM389_04490 PF00005 ABC transporter KM389_04495 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM389_04505 PF14398 YheC/D like ATP-grasp KM389_04515 PF04286 Protein of unknown function (DUF445) KM389_04520 PF06133 Control of competence regulator ComK, YlbF/YmcA KM389_04535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM389_04535 PF00205 Thiamine pyrophosphate enzyme, central domain KM389_04535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM389_04540 PF03306 Alpha-acetolactate decarboxylase KM389_04550 PF02245 Methylpurine-DNA glycosylase (MPG) KM389_04570 PF04055 Radical SAM superfamily KM389_04575 PF13193 AMP-binding enzyme C-terminal domain KM389_04575 PF00501 AMP-binding enzyme KM389_04585 PF00916 Sulfate permease family KM389_04585 PF01740 STAS domain KM389_04605 PF07517 SecA DEAD-like domain KM389_04605 PF01043 SecA preprotein cross-linking domain KM389_04605 PF07516 SecA Wing and Scaffold domain KM389_04610 PF14667 Polysaccharide biosynthesis C-terminal domain KM389_04610 PF01943 Polysaccharide biosynthesis protein KM389_04620 PF02368 Bacterial Ig-like domain (group 2) KM389_04620 PF13205 Bacterial Ig-like domain KM389_04620 PF00395 S-layer homology domain KM389_04625 PF00395 S-layer homology domain KM389_04635 PF03062 MBOAT, membrane-bound O-acyltransferase family KM389_04640 PF03062 MBOAT, membrane-bound O-acyltransferase family KM389_04655 PF00378 Enoyl-CoA hydratase/isomerase KM389_04675 PF05343 M42 glutamyl aminopeptidase KM389_04680 PF01520 N-acetylmuramoyl-L-alanine amidase KM389_04680 PF00395 S-layer homology domain KM389_04695 PF05544 Proline racemase KM389_04700 PF02423 Ornithine cyclodeaminase/mu-crystallin family KM389_04730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_04735 PF00528 Binding-protein-dependent transport system inner membrane component KM389_04740 PF00528 Binding-protein-dependent transport system inner membrane component KM389_04740 PF12911 N-terminal TM domain of oligopeptide transport permease C KM389_04750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM389_04750 PF00005 ABC transporter KM389_04755 PF01541 GIY-YIG catalytic domain KM389_04785 PF00083 Sugar (and other) transporter KM389_04790 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM389_04790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_04795 PF08279 HTH domain KM389_04795 PF00072 Response regulator receiver domain KM389_04795 PF12431 Transcriptional regulator KM389_04800 PF03401 Tripartite tricarboxylate transporter family receptor KM389_04805 PF02342 TerD domain KM389_04830 PF13411 MerR HTH family regulatory protein KM389_04830 PF06445 GyrI-like small molecule binding domain KM389_04845 PF00772 DnaB-like helicase N terminal domain KM389_04845 PF03796 DnaB-like helicase C terminal domain KM389_04870 PF01925 Sulfite exporter TauE/SafE KM389_04885 PF07690 Major Facilitator Superfamily KM389_04930 PF07993 Male sterility protein KM389_04930 PF00550 Phosphopantetheine attachment site KM389_04935 PF00440 Bacterial regulatory proteins, tetR family KM389_04935 PF18665 Tetracyclin repressor-like, C-terminal domain KM389_04955 PF01066 CDP-alcohol phosphatidyltransferase KM389_04975 PF02733 Dak1 domain KM389_04985 PF02733 Dak1 domain KM389_04990 PF02525 Flavodoxin-like fold KM389_04995 PF02082 Transcriptional regulator KM389_05025 PF00672 HAMP domain KM389_05025 PF01966 HD domain KM389_05045 PF00395 S-layer homology domain KM389_05070 PF11181 Heat induced stress protein YflT KM389_05075 PF05532 CsbD-like KM389_05090 PF01740 STAS domain KM389_05095 PF13581 Histidine kinase-like ATPase domain KM389_05100 PF04542 Sigma-70 region 2 KM389_05100 PF04539 Sigma-70 region 3 KM389_05100 PF04545 Sigma-70, region 4 KM389_05110 PF13426 PAS domain KM389_05110 PF07228 Stage II sporulation protein E (SpoIIE) KM389_05115 PF01739 CheR methyltransferase, SAM binding domain KM389_05115 PF03705 CheR methyltransferase, all-alpha domain KM389_05120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_05120 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM389_05120 PF00072 Response regulator receiver domain KM389_05120 PF01627 Hpt domain KM389_05120 PF00512 His Kinase A (phospho-acceptor) domain KM389_05145 PF01906 Putative heavy-metal-binding KM389_05155 PF00107 Zinc-binding dehydrogenase KM389_05155 PF08240 Alcohol dehydrogenase GroES-like domain KM389_05160 PF11121 Protein of unknown function (DUF2639) KM389_05175 PF00149 Calcineurin-like phosphoesterase KM389_05180 PF13514 AAA domain KM389_05185 PF07282 Putative transposase DNA-binding domain KM389_05185 PF01385 Probable transposase KM389_05185 PF12323 Helix-turn-helix domain KM389_05195 PF01966 HD domain KM389_05195 PF01336 OB-fold nucleic acid binding domain KM389_05200 PF00440 Bacterial regulatory proteins, tetR family KM389_05205 PF07690 Major Facilitator Superfamily KM389_05210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM389_05220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM389_05225 PF18801 response regulator aspartate phosphatase H, N terminal KM389_05230 PF08386 TAP-like protein KM389_05230 PF00561 alpha/beta hydrolase fold KM389_05250 PF04309 Glycerol-3-phosphate responsive antiterminator KM389_05255 PF00230 Major intrinsic protein KM389_05260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM389_05260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM389_05265 PF01266 FAD dependent oxidoreductase KM389_05265 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KM389_05280 PF08281 Sigma-70, region 4 KM389_05280 PF04542 Sigma-70 region 2 KM389_05305 PF07690 Major Facilitator Superfamily KM389_05310 PF07690 Major Facilitator Superfamily KM389_05320 PF13538 UvrD-like helicase C-terminal domain KM389_05340 PF01047 MarR family KM389_05345 PF12732 YtxH-like protein KM389_05350 PF01230 HIT domain KM389_05355 PF00005 ABC transporter KM389_05360 PF05975 Bacterial ABC transporter protein EcsB KM389_05365 PF12787 EcsC protein family KM389_05375 PF00440 Bacterial regulatory proteins, tetR family KM389_05375 PF17934 Tetracyclin repressor-like, C-terminal domain KM389_05385 PF03703 Bacterial PH domain KM389_05435 PF03703 Bacterial PH domain KM389_05440 PF03703 Bacterial PH domain KM389_05445 PF03992 Antibiotic biosynthesis monooxygenase KM389_05450 PF00905 Penicillin binding protein transpeptidase domain KM389_05450 PF00912 Transglycosylase KM389_05455 PF01208 Uroporphyrinogen decarboxylase (URO-D) KM389_05460 PF00762 Ferrochelatase KM389_05465 PF01593 Flavin containing amine oxidoreductase KM389_05490 PF03965 Penicillinase repressor KM389_05500 PF17932 Tetracyclin repressor-like, C-terminal domain KM389_05500 PF00440 Bacterial regulatory proteins, tetR family KM389_05530 PF00356 Bacterial regulatory proteins, lacI family KM389_05535 PF14149 YhfH-like protein KM389_05540 PF12706 Beta-lactamase superfamily domain KM389_05545 PF03099 Biotin/lipoate A/B protein ligase family KM389_05545 PF10437 Bacterial lipoate protein ligase C-terminus KM389_05555 PF00501 AMP-binding enzyme KM389_05555 PF13193 AMP-binding enzyme C-terminal domain KM389_05565 PF00395 S-layer homology domain KM389_05565 PF01520 N-acetylmuramoyl-L-alanine amidase KM389_05570 PF05593 RHS Repeat KM389_05585 PF05593 RHS Repeat KM389_05625 PF01966 HD domain KM389_05635 PF04542 Sigma-70 region 2 KM389_05635 PF08281 Sigma-70, region 4 KM389_05640 PF12833 Helix-turn-helix domain KM389_05640 PF06445 GyrI-like small molecule binding domain KM389_05655 PF00512 His Kinase A (phospho-acceptor) domain KM389_05655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_05660 PF00486 Transcriptional regulatory protein, C terminal KM389_05660 PF00072 Response regulator receiver domain KM389_05685 PF16491 CAAX prenyl protease N-terminal, five membrane helices KM389_05685 PF01435 Peptidase family M48 KM389_05690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM389_05690 PF00672 HAMP domain KM389_05690 PF02743 Cache domain KM389_05695 PF00892 EamA-like transporter family KM389_05700 PF00150 Cellulase (glycosyl hydrolase family 5) KM389_05700 PF03424 Carbohydrate binding domain (family 17/28) KM389_05700 PF00395 S-layer homology domain KM389_05710 PF00395 S-layer homology domain KM389_05715 PF01274 Malate synthase KM389_05720 PF00463 Isocitrate lyase family KM389_05730 PF00313 'Cold-shock' DNA-binding domain KM389_05745 PF06338 ComK protein KM389_05750 PF09335 SNARE associated Golgi protein KM389_05755 PF10502 Signal peptidase, peptidase S26 KM389_05760 PF12705 PD-(D/E)XK nuclease superfamily KM389_05760 PF13361 UvrD-like helicase C-terminal domain KM389_05765 PF12705 PD-(D/E)XK nuclease superfamily KM389_05765 PF00580 UvrD/REP helicase N-terminal domain KM389_05765 PF13361 UvrD-like helicase C-terminal domain KM389_05775 PF10676 Spore germination protein gerPA/gerPF KM389_05780 PF10970 Spore germination protein GerPE KM389_05790 PF10737 Spore germination protein GerPC KM389_05795 PF10803 Spore germination GerPB KM389_05800 PF10676 Spore germination protein gerPA/gerPF KM389_05810 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM389_05820 PF00202 Aminotransferase class-III KM389_05825 PF07457 Protein of unknown function (DUF1516) KM389_05835 PF13537 Glutamine amidotransferase domain KM389_05835 PF00733 Asparagine synthase KM389_05840 PF00762 Ferrochelatase KM389_05845 PF06628 Catalase-related immune-responsive KM389_05845 PF00199 Catalase KM389_05850 PF00909 Ammonium Transporter Family KM389_05855 PF00128 Alpha amylase, catalytic domain KM389_05865 PF04461 Protein of unknown function (DUF520) KM389_05870 PF13509 S1 domain KM389_05870 PF17783 CvfB-like winged helix domain KM389_05880 PF00639 PPIC-type PPIASE domain KM389_05890 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM389_05890 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM389_05895 PF12758 Protein of unknown function (DUF3813) KM389_05910 PF14168 YjzC-like protein KM389_05915 PF00004 ATPase family associated with various cellular activities (AAA) KM389_05915 PF10431 C-terminal, D2-small domain, of ClpB protein KM389_05915 PF02861 Clp amino terminal domain, pathogenicity island component KM389_05915 PF17871 AAA lid domain KM389_05915 PF07724 AAA domain (Cdc48 subfamily) KM389_05935 PF10815 ComZ KM389_05940 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM389_05940 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM389_05945 PF02801 Beta-ketoacyl synthase, C-terminal domain KM389_05945 PF00109 Beta-ketoacyl synthase, N-terminal domain KM389_05950 PF10026 Predicted Zn-dependent protease (DUF2268) KM389_05955 PF12227 Protein of unknown function (DUF3603) KM389_05960 PF00579 tRNA synthetases class I (W and Y) KM389_05970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_05975 PF00528 Binding-protein-dependent transport system inner membrane component KM389_05980 PF12911 N-terminal TM domain of oligopeptide transport permease C KM389_05980 PF00528 Binding-protein-dependent transport system inner membrane component KM389_05985 PF00005 ABC transporter KM389_05985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM389_05990 PF00005 ABC transporter KM389_05990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM389_05995 PF01554 MatE KM389_06000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_06010 PF03960 ArsC family KM389_06015 PF03741 Integral membrane protein TerC family KM389_06020 PF05389 Negative regulator of genetic competence (MecA) KM389_06025 PF13091 PLD-like domain KM389_06025 PF13396 Phospholipase_D-nuclease N-terminal KM389_06035 PF01432 Peptidase family M3 KM389_06035 PF08439 Oligopeptidase F KM389_06050 PF01152 Bacterial-like globin KM389_06055 PF01928 CYTH domain KM389_06065 PF04607 Region found in RelA / SpoT proteins KM389_06070 PF01513 ATP-NAD kinase KM389_06075 PF00849 RNA pseudouridylate synthase KM389_06085 PF00149 Calcineurin-like phosphoesterase KM389_06095 PF00535 Glycosyl transferase family 2 KM389_06100 PF08241 Methyltransferase domain KM389_06105 PF05711 Macrocin-O-methyltransferase (TylF) KM389_06115 PF00535 Glycosyl transferase family 2 KM389_06115 PF13181 Tetratricopeptide repeat KM389_06135 PF00483 Nucleotidyl transferase KM389_06140 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KM389_06145 PF16363 GDP-mannose 4,6 dehydratase KM389_06150 PF04321 RmlD substrate binding domain KM389_06170 PF07098 Protein of unknown function (DUF1360) KM389_06190 PF00580 UvrD/REP helicase N-terminal domain KM389_06190 PF13361 UvrD-like helicase C-terminal domain KM389_06195 PF13673 Acetyltransferase (GNAT) domain KM389_06205 PF00756 Putative esterase KM389_06220 PF02368 Bacterial Ig-like domain (group 2) KM389_06225 PF00474 Sodium:solute symporter family KM389_06230 PF04715 Anthranilate synthase component I, N terminal region KM389_06230 PF00425 chorismate binding enzyme KM389_06235 PF00591 Glycosyl transferase family, a/b domain KM389_06235 PF00117 Glutamine amidotransferase class-I KM389_06235 PF02885 Glycosyl transferase family, helical bundle domain KM389_06240 PF02885 Glycosyl transferase family, helical bundle domain KM389_06240 PF00591 Glycosyl transferase family, a/b domain KM389_06245 PF00218 Indole-3-glycerol phosphate synthase KM389_06250 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KM389_06255 PF00291 Pyridoxal-phosphate dependent enzyme KM389_06260 PF00290 Tryptophan synthase alpha chain KM389_06270 PF02652 L-lactate permease KM389_06275 PF10042 Uncharacterized conserved protein (DUF2278) KM389_06300 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_06300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM389_06330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM389_06330 PF00364 Biotin-requiring enzyme KM389_06330 PF02817 e3 binding domain KM389_06335 PF16870 2-oxoglutarate dehydrogenase C-terminal KM389_06335 PF00676 Dehydrogenase E1 component KM389_06335 PF02779 Transketolase, pyrimidine binding domain KM389_06340 PF01381 Helix-turn-helix KM389_06400 PF13649 Methyltransferase domain KM389_06410 PF00768 D-alanyl-D-alanine carboxypeptidase KM389_06410 PF07943 Penicillin-binding protein 5, C-terminal domain KM389_06420 PF12389 Camelysin metallo-endopeptidase KM389_06430 PF12389 Camelysin metallo-endopeptidase KM389_06435 PF01381 Helix-turn-helix KM389_06435 PF08671 Anti-repressor SinI KM389_06445 PF05547 Immune inhibitor A peptidase M6 KM389_06450 PF00171 Aldehyde dehydrogenase family KM389_06455 PF00005 ABC transporter KM389_06455 PF08402 TOBE domain KM389_06460 PF00528 Binding-protein-dependent transport system inner membrane component KM389_06465 PF00528 Binding-protein-dependent transport system inner membrane component KM389_06470 PF13416 Bacterial extracellular solute-binding protein KM389_06480 PF03176 MMPL family KM389_06490 PF00849 RNA pseudouridylate synthase KM389_06490 PF01479 S4 domain KM389_06500 PF00188 Cysteine-rich secretory protein family KM389_06505 PF13183 4Fe-4S dicluster domain KM389_06505 PF02754 Cysteine-rich domain KM389_06510 PF01565 FAD binding domain KM389_06510 PF02913 FAD linked oxidases, C-terminal domain KM389_06515 PF17853 GGDEF-like domain KM389_06515 PF05651 Putative sugar diacid recognition KM389_06515 PF13556 PucR C-terminal helix-turn-helix domain KM389_06525 PF00486 Transcriptional regulatory protein, C terminal KM389_06525 PF00072 Response regulator receiver domain KM389_06530 PF18698 Histidine kinase sensor domain KM389_06530 PF00989 PAS fold KM389_06530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_06530 PF00512 His Kinase A (phospho-acceptor) domain KM389_06530 PF00672 HAMP domain KM389_06535 PF00392 Bacterial regulatory proteins, gntR family KM389_06535 PF07729 FCD domain KM389_06540 PF02754 Cysteine-rich domain KM389_06545 PF11870 Domain of unknown function (DUF3390) KM389_06545 PF13183 4Fe-4S dicluster domain KM389_06545 PF02589 LUD domain KM389_06550 PF02589 LUD domain KM389_06555 PF06750 Bacterial Peptidase A24 N-terminal domain KM389_06555 PF01478 Type IV leader peptidase family KM389_06570 PF01226 Formate/nitrite transporter KM389_06575 PF03741 Integral membrane protein TerC family KM389_06585 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM389_06590 PF01575 MaoC like domain KM389_06615 PF00561 alpha/beta hydrolase fold KM389_06620 PF01266 FAD dependent oxidoreductase KM389_06625 PF02386 Cation transport protein KM389_06655 PF13419 Haloacid dehalogenase-like hydrolase KM389_06660 PF00266 Aminotransferase class-V KM389_06670 PF00455 DeoR C terminal sensor domain KM389_06670 PF08220 DeoR-like helix-turn-helix domain KM389_06690 PF04748 Divergent polysaccharide deacetylase KM389_06695 PF09388 Spo0E like sporulation regulatory protein KM389_06700 PF02743 Cache domain KM389_06700 PF00512 His Kinase A (phospho-acceptor) domain KM389_06700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_06705 PF01047 MarR family KM389_06715 PF12867 DinB superfamily KM389_06720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_06720 PF00512 His Kinase A (phospho-acceptor) domain KM389_06720 PF00989 PAS fold KM389_06720 PF13188 PAS domain KM389_06720 PF13426 PAS domain KM389_06725 PF06508 Queuosine biosynthesis protein QueC KM389_06730 PF01242 6-pyruvoyl tetrahydropterin synthase KM389_06735 PF04055 Radical SAM superfamily KM389_06740 PF14489 QueF-like protein KM389_06745 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KM389_06775 PF07972 NrdI Flavodoxin like KM389_06795 PF00268 Ribonucleotide reductase, small chain KM389_06800 PF00392 Bacterial regulatory proteins, gntR family KM389_06805 PF00005 ABC transporter KM389_06815 PF00005 ABC transporter KM389_06835 PF01037 Lrp/AsnC ligand binding domain KM389_06845 PF00857 Isochorismatase family KM389_06855 PF17676 LD-carboxypeptidase C-terminal domain KM389_06855 PF02016 LD-carboxypeptidase N-terminal domain KM389_06860 PF03060 Nitronate monooxygenase KM389_06865 PF04914 DltD protein KM389_06870 PF00550 Phosphopantetheine attachment site KM389_06875 PF03062 MBOAT, membrane-bound O-acyltransferase family KM389_06880 PF00501 AMP-binding enzyme KM389_06880 PF13193 AMP-binding enzyme C-terminal domain KM389_06890 PF01546 Peptidase family M20/M25/M40 KM389_06890 PF07687 Peptidase dimerisation domain KM389_06900 PF00258 Flavodoxin KM389_06915 PF01636 Phosphotransferase enzyme family KM389_06935 PF01554 MatE KM389_06940 PF02673 Bacitracin resistance protein BacA KM389_06955 PF01047 MarR family KM389_06965 PF00375 Sodium:dicarboxylate symporter family KM389_06970 PF02386 Cation transport protein KM389_06980 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM389_06990 PF03698 Uncharacterised protein family (UPF0180) KM389_07005 PF01063 Amino-transferase class IV KM389_07010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM389_07010 PF00205 Thiamine pyrophosphate enzyme, central domain KM389_07010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM389_07015 PF10369 Small subunit of acetolactate synthase KM389_07015 PF01842 ACT domain KM389_07020 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM389_07020 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM389_07025 PF08502 LeuA allosteric (dimerisation) domain KM389_07025 PF00682 HMGL-like KM389_07030 PF00180 Isocitrate/isopropylmalate dehydrogenase KM389_07035 PF00330 Aconitase family (aconitate hydratase) KM389_07040 PF00694 Aconitase C-terminal domain KM389_07045 PF13393 Histidyl-tRNA synthetase KM389_07050 PF01634 ATP phosphoribosyltransferase KM389_07055 PF00815 Histidinol dehydrogenase KM389_07060 PF00475 Imidazoleglycerol-phosphate dehydratase KM389_07065 PF00117 Glutamine amidotransferase class-I KM389_07070 PF00977 Histidine biosynthesis protein KM389_07075 PF00977 Histidine biosynthesis protein KM389_07080 PF01502 Phosphoribosyl-AMP cyclohydrolase KM389_07085 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KM389_07090 PF02811 PHP domain KM389_07100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM389_07100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM389_07105 PF01066 CDP-alcohol phosphatidyltransferase KM389_07110 PF00884 Sulfatase KM389_07120 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KM389_07120 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KM389_07130 PF01507 Phosphoadenosine phosphosulfate reductase family KM389_07135 PF01747 ATP-sulfurylase KM389_07135 PF14306 PUA-like domain KM389_07145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM389_07145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM389_07155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM389_07160 PF01903 CbiX KM389_07170 PF00209 Sodium:neurotransmitter symporter family KM389_07180 PF00375 Sodium:dicarboxylate symporter family KM389_07190 PF03553 Na+/H+ antiporter family KM389_07205 PF09922 Cell wall-active antibiotics response 4TMS YvqF KM389_07210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_07210 PF00672 HAMP domain KM389_07210 PF07730 Histidine kinase KM389_07215 PF00196 Bacterial regulatory proteins, luxR family KM389_07215 PF00072 Response regulator receiver domain KM389_07225 PF05525 Branched-chain amino acid transport protein KM389_07235 PF08241 Methyltransferase domain KM389_07260 PF00970 Oxidoreductase FAD-binding domain KM389_07260 PF00042 Globin KM389_07260 PF00175 Oxidoreductase NAD-binding domain KM389_07275 PF01925 Sulfite exporter TauE/SafE KM389_07280 PF01384 Phosphate transporter family KM389_07285 PF01865 Protein of unknown function DUF47 KM389_07290 PF00905 Penicillin binding protein transpeptidase domain KM389_07290 PF00912 Transglycosylase KM389_07305 PF00989 PAS fold KM389_07305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_07305 PF00512 His Kinase A (phospho-acceptor) domain KM389_07310 PF01904 Protein of unknown function DUF72 KM389_07320 PF00589 Phage integrase family KM389_07325 PF00989 PAS fold KM389_07325 PF16736 Single Cache-like KM389_07325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_07325 PF00512 His Kinase A (phospho-acceptor) domain KM389_07330 PF01048 Phosphorylase superfamily KM389_07345 PF09924 Uncharacterised conserved protein (DUF2156) KM389_07345 PF03706 Lysylphosphatidylglycerol synthase TM region KM389_07360 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM389_07360 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM389_07365 PF07943 Penicillin-binding protein 5, C-terminal domain KM389_07365 PF00768 D-alanyl-D-alanine carboxypeptidase KM389_07370 PF07670 Nucleoside recognition KM389_07375 PF07670 Nucleoside recognition KM389_07380 PF00849 RNA pseudouridylate synthase KM389_07380 PF01479 S4 domain KM389_07385 PF00578 AhpC/TSA family KM389_07390 PF05140 ResB-like family KM389_07395 PF01578 Cytochrome C assembly protein KM389_07400 PF00072 Response regulator receiver domain KM389_07400 PF00486 Transcriptional regulatory protein, C terminal KM389_07405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_07405 PF18698 Histidine kinase sensor domain KM389_07405 PF00512 His Kinase A (phospho-acceptor) domain KM389_07405 PF00989 PAS fold KM389_07405 PF00672 HAMP domain KM389_07410 PF01923 Cobalamin adenosyltransferase KM389_07425 PF12822 ECF transporter, substrate-specific component KM389_07435 PF14493 Helix-turn-helix domain KM389_07440 PF00270 DEAD/DEAH box helicase KM389_07440 PF00271 Helicase conserved C-terminal domain KM389_07445 PF02517 CPBP intramembrane metalloprotease KM389_07460 PF02310 B12 binding domain KM389_07460 PF02607 B12 binding domain KM389_07460 PF13411 MerR HTH family regulatory protein KM389_07465 PF05389 Negative regulator of genetic competence (MecA) KM389_07470 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM389_07470 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM389_07495 PF00710 Asparaginase, N-terminal KM389_07495 PF17763 Glutaminase/Asparaginase C-terminal domain KM389_07505 PF02224 Cytidylate kinase KM389_07510 PF00575 S1 RNA binding domain KM389_07515 PF01070 FMN-dependent dehydrogenase KM389_07520 PF14140 YpzI-like protein KM389_07530 PF14045 YIEGIA protein KM389_07540 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KM389_07540 PF01926 50S ribosome-binding GTPase KM389_07545 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KM389_07545 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KM389_07555 PF10966 Protein of unknown function (DUF2768) KM389_07565 PF09547 Stage IV sporulation protein A (spore_IV_A) KM389_07570 PF00216 Bacterial DNA-binding protein KM389_07575 PF01227 GTP cyclohydrolase I KM389_07580 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KM389_07585 PF01209 ubiE/COQ5 methyltransferase family KM389_07590 PF00348 Polyprenyl synthetase KM389_07595 PF00334 Nucleoside diphosphate kinase KM389_07600 PF01264 Chorismate synthase KM389_07605 PF01761 3-dehydroquinate synthase KM389_07610 PF00155 Aminotransferase class I and II KM389_07620 PF08858 IDEAL domain KM389_07620 PF08864 UPF0302 domain KM389_07625 PF10673 Protein of unknown function (DUF2487) KM389_07630 PF00355 Rieske [2Fe-2S] domain KM389_07635 PF00033 Cytochrome b/b6/petB KM389_07640 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM389_07640 PF00032 Cytochrome b(C-terminal)/b6/petD KM389_07645 PF07187 Protein of unknown function (DUF1405) KM389_07655 PF09577 Sporulation protein YpjB (SpoYpjB) KM389_07660 PF04298 Putative neutral zinc metallopeptidase KM389_07670 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM389_07670 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM389_07675 PF03819 MazG nucleotide pyrophosphohydrolase domain KM389_07680 PF05173 Dihydrodipicolinate reductase, C-terminus KM389_07680 PF01113 Dihydrodipicolinate reductase, N-terminus KM389_07685 PF02142 MGS-like domain KM389_07690 PF02585 GlcNAc-PI de-N-acetylase KM389_07695 PF00534 Glycosyl transferases group 1 KM389_07695 PF13439 Glycosyltransferase Family 4 KM389_07700 PF01743 Poly A polymerase head domain KM389_07700 PF13735 tRNA nucleotidyltransferase domain 2 putative KM389_07700 PF12627 Probable RNA and SrmB- binding site of polymerase A KM389_07705 PF02237 Biotin protein ligase C terminal domain KM389_07705 PF03099 Biotin/lipoate A/B protein ligase family KM389_07705 PF08279 HTH domain KM389_07715 PF02548 Ketopantoate hydroxymethyltransferase KM389_07720 PF02569 Pantoate-beta-alanine ligase KM389_07725 PF02261 Aspartate decarboxylase KM389_07730 PF13307 Helicase C-terminal domain KM389_07730 PF04851 Type III restriction enzyme, res subunit KM389_07730 PF00929 Exonuclease KM389_07735 PF14084 Protein of unknown function (DUF4264) KM389_07745 PF00155 Aminotransferase class I and II KM389_07750 PF07261 Replication initiation and membrane attachment KM389_07755 PF00730 HhH-GPD superfamily base excision DNA repair protein KM389_07755 PF00633 Helix-hairpin-helix motif KM389_07755 PF10576 Iron-sulfur binding domain of endonuclease III KM389_07765 PF00905 Penicillin binding protein transpeptidase domain KM389_07765 PF00912 Transglycosylase KM389_07770 PF03838 Recombination protein U KM389_07775 PF10720 Protein of unknown function (DUF2515) KM389_07810 PF06908 YspA SLOG family KM389_07815 PF05103 DivIVA protein KM389_07825 PF02926 THUMP domain KM389_07825 PF01170 Putative RNA methylase family UPF0020 KM389_07835 PF13307 Helicase C-terminal domain KM389_07840 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KM389_07850 PF01636 Phosphotransferase enzyme family KM389_07855 PF00557 Metallopeptidase family M24 KM389_07860 PF00156 Phosphoribosyl transferase domain KM389_07865 PF00860 Permease family KM389_07870 PF04235 Protein of unknown function (DUF418) KM389_07875 PF00350 Dynamin family KM389_07885 PF00583 Acetyltransferase (GNAT) family KM389_07890 PF10752 Protein of unknown function (DUF2533) KM389_07895 PF00581 Rhodanese-like domain KM389_07930 PF00689 Cation transporting ATPase, C-terminus KM389_07930 PF00690 Cation transporter/ATPase, N-terminus KM389_07935 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM389_07935 PF01367 5'-3' exonuclease, C-terminal SAM fold KM389_07960 PF02397 Bacterial sugar transferase KM389_07975 PF00535 Glycosyl transferase family 2 KM389_07980 PF00534 Glycosyl transferases group 1 KM389_07980 PF13439 Glycosyltransferase Family 4 KM389_07995 PF18014 Acetyltransferase (GNAT) domain KM389_07995 PF13673 Acetyltransferase (GNAT) domain KM389_08015 PF13456 Reverse transcriptase-like KM389_08020 PF01263 Aldose 1-epimerase KM389_08045 PF00313 'Cold-shock' DNA-binding domain KM389_08055 PF01810 LysE type translocator KM389_08070 PF04341 Protein of unknown function, DUF485 KM389_08075 PF00474 Sodium:solute symporter family KM389_08080 PF00202 Aminotransferase class-III KM389_08090 PF00999 Sodium/hydrogen exchanger family KM389_08095 PF17770 Ribonuclease J C-terminal domain KM389_08095 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM389_08095 PF00753 Metallo-beta-lactamase superfamily KM389_08100 PF13411 MerR HTH family regulatory protein KM389_08100 PF06445 GyrI-like small molecule binding domain KM389_08110 PF04239 Protein of unknown function (DUF421) KM389_08115 PF02698 DUF218 domain KM389_08125 PF00881 Nitroreductase family KM389_08170 PF17209 Hfq protein KM389_08180 PF01618 MotA/TolQ/ExbB proton channel family KM389_08185 PF00691 OmpA family KM389_08185 PF13677 Membrane MotB of proton-channel complex MotA/MotB KM389_08190 PF00072 Response regulator receiver domain KM389_08195 PF07194 P2 response regulator binding domain KM389_08195 PF01627 Hpt domain KM389_08195 PF02895 Signal transducing histidine kinase, homodimeric domain KM389_08195 PF01584 CheW-like domain KM389_08195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_08200 PF02895 Signal transducing histidine kinase, homodimeric domain KM389_08200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_08200 PF01627 Hpt domain KM389_08200 PF07194 P2 response regulator binding domain KM389_08200 PF01584 CheW-like domain KM389_08205 PF04509 CheC-like family KM389_08205 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM389_08220 PF01739 CheR methyltransferase, SAM binding domain KM389_08220 PF03705 CheR methyltransferase, all-alpha domain KM389_08240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM389_08240 PF00460 Flagella basal body rod protein KM389_08265 PF00460 Flagella basal body rod protein KM389_08270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM389_08270 PF00460 Flagella basal body rod protein KM389_08275 PF02049 Flagellar hook-basal body complex protein FliE KM389_08285 PF14841 FliG middle domain KM389_08285 PF14842 FliG N-terminal domain KM389_08285 PF01706 FliG C-terminal domain KM389_08295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM389_08295 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM389_08295 PF18269 T3SS EscN ATPase C-terminal domain KM389_08320 PF07559 Flagellar basal body protein FlaE KM389_08320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM389_08320 PF00460 Flagella basal body rod protein KM389_08335 PF00072 Response regulator receiver domain KM389_08335 PF01584 CheW-like domain KM389_08340 PF12181 DNA binding domain of the motility gene repressor (MogR) KM389_08345 PF00535 Glycosyl transferase family 2 KM389_08380 PF00669 Bacterial flagellin N-terminal helical region KM389_08380 PF00700 Bacterial flagellin C-terminal helical region KM389_08385 PF01464 Transglycosylase SLT domain KM389_08400 PF04509 CheC-like family KM389_08400 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM389_08410 PF00813 FliP family KM389_08415 PF01313 Bacterial export proteins, family 3 KM389_08425 PF01312 FlhB HrpN YscU SpaS Family KM389_08430 PF00771 FHIPEP family KM389_08435 PF00448 SRP54-type protein, GTPase domain KM389_08440 PF00460 Flagella basal body rod protein KM389_08440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM389_08445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM389_08445 PF01411 tRNA synthetases class II (A) KM389_08445 PF02272 DHHA1 domain KM389_08470 PF00440 Bacterial regulatory proteins, tetR family KM389_08470 PF17932 Tetracyclin repressor-like, C-terminal domain KM389_08475 PF17329 Family of unknown function (DUF5367) KM389_08490 PF03992 Antibiotic biosynthesis monooxygenase KM389_08495 PF08141 Small acid-soluble spore protein H family KM389_08515 PF03466 LysR substrate binding domain KM389_08515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM389_08520 PF08402 TOBE domain KM389_08520 PF00005 ABC transporter KM389_08530 PF00528 Binding-protein-dependent transport system inner membrane component KM389_08535 PF12706 Beta-lactamase superfamily domain KM389_08535 PF00753 Metallo-beta-lactamase superfamily KM389_08545 PF10787 Uncharacterised protein from bacillus cereus group KM389_08560 PF07943 Penicillin-binding protein 5, C-terminal domain KM389_08560 PF00768 D-alanyl-D-alanine carboxypeptidase KM389_08570 PF00300 Histidine phosphatase superfamily (branch 1) KM389_08600 PF13537 Glutamine amidotransferase domain KM389_08600 PF00733 Asparagine synthase KM389_08620 PF16916 Dimerisation domain of Zinc Transporter KM389_08620 PF01545 Cation efflux family KM389_08630 PF07729 FCD domain KM389_08630 PF00392 Bacterial regulatory proteins, gntR family KM389_08635 PF00892 EamA-like transporter family KM389_08640 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM389_08640 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM389_08645 PF03773 Predicted permease KM389_08655 PF00535 Glycosyl transferase family 2 KM389_08660 PF03553 Na+/H+ antiporter family KM389_08665 PF00206 Lyase KM389_08665 PF10415 Fumarase C C-terminus KM389_08690 PF03575 Peptidase family S51 KM389_08710 PF02683 Cytochrome C biogenesis protein transmembrane region KM389_08715 PF00578 AhpC/TSA family KM389_08735 PF00291 Pyridoxal-phosphate dependent enzyme KM389_08740 PF04286 Protein of unknown function (DUF445) KM389_08765 PF00196 Bacterial regulatory proteins, luxR family KM389_08765 PF00072 Response regulator receiver domain KM389_08770 PF13185 GAF domain KM389_08770 PF07730 Histidine kinase KM389_08770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_08770 PF13492 GAF domain KM389_08775 PF00005 ABC transporter KM389_08790 PF13091 PLD-like domain KM389_08795 PF00696 Amino acid kinase family KM389_08800 PF00375 Sodium:dicarboxylate symporter family KM389_08805 PF10415 Fumarase C C-terminus KM389_08805 PF00206 Lyase KM389_08810 PF03949 Malic enzyme, NAD binding domain KM389_08810 PF00390 Malic enzyme, N-terminal domain KM389_08815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_08820 PF00072 Response regulator receiver domain KM389_08820 PF08664 YcbB domain KM389_08825 PF04434 SWIM zinc finger KM389_08825 PF00176 SNF2 family N-terminal domain KM389_08825 PF00271 Helicase conserved C-terminal domain KM389_08840 PF03590 Aspartate-ammonia ligase KM389_08860 PF13840 ACT domain KM389_08860 PF00696 Amino acid kinase family KM389_08870 PF13761 Domain of unknown function (DUF4166) KM389_08875 PF14158 YndJ-like protein KM389_08880 PF00293 NUDIX domain KM389_08885 PF00395 S-layer homology domain KM389_08885 PF13205 Bacterial Ig-like domain KM389_08885 PF02368 Bacterial Ig-like domain (group 2) KM389_08895 PF07690 Major Facilitator Superfamily KM389_08910 PF02554 Carbon starvation protein CstA KM389_08915 PF03976 Polyphosphate kinase 2 (PPK2) KM389_08925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM389_08925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM389_08935 PF16360 GTP-binding GTPase Middle Region KM389_08935 PF13167 GTP-binding GTPase N-terminal KM389_08935 PF01926 50S ribosome-binding GTPase KM389_08945 PF07690 Major Facilitator Superfamily KM389_08950 PF00291 Pyridoxal-phosphate dependent enzyme KM389_08965 PF14667 Polysaccharide biosynthesis C-terminal domain KM389_08965 PF01943 Polysaccharide biosynthesis protein KM389_08970 PF00209 Sodium:neurotransmitter symporter family KM389_08975 PF03422 Carbohydrate binding module (family 6) KM389_08975 PF00457 Glycosyl hydrolases family 11 KM389_08975 PF01522 Polysaccharide deacetylase KM389_08985 PF04239 Protein of unknown function (DUF421) KM389_09000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM389_09000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM389_09015 PF01625 Peptide methionine sulfoxide reductase KM389_09025 PF01063 Amino-transferase class IV KM389_09030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM389_09030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM389_09030 PF00205 Thiamine pyrophosphate enzyme, central domain KM389_09035 PF10369 Small subunit of acetolactate synthase KM389_09040 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM389_09040 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM389_09045 PF00920 Dehydratase family KM389_09050 PF00291 Pyridoxal-phosphate dependent enzyme KM389_09050 PF00585 C-terminal regulatory domain of Threonine dehydratase KM389_09060 PF09587 Bacterial capsule synthesis protein PGA_cap KM389_09075 PF07690 Major Facilitator Superfamily KM389_09080 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KM389_09090 PF04397 LytTr DNA-binding domain KM389_09090 PF00072 Response regulator receiver domain KM389_09095 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KM389_09095 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KM389_09115 PF13026 Protein of unknown function (DUF3887) KM389_09115 PF12146 Serine aminopeptidase, S33 KM389_09145 PF13186 Iron-sulfur cluster-binding domain KM389_09145 PF04055 Radical SAM superfamily KM389_09150 PF13302 Acetyltransferase (GNAT) domain KM389_09155 PF00072 Response regulator receiver domain KM389_09155 PF00486 Transcriptional regulatory protein, C terminal KM389_09170 PF01566 Natural resistance-associated macrophage protein KM389_09175 PF00581 Rhodanese-like domain KM389_09175 PF12368 Rhodanase C-terminal KM389_09175 PF17773 UPF0176 acylphosphatase like domain KM389_09185 PF02558 Ketopantoate reductase PanE/ApbA KM389_09185 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM389_09200 PF05791 Bacillus haemolytic enterotoxin (HBL) KM389_09215 PF04198 Putative sugar-binding domain KM389_09220 PF01791 DeoC/LacD family aldolase KM389_09225 PF07662 Na+ dependent nucleoside transporter C-terminus KM389_09225 PF01773 Na+ dependent nucleoside transporter N-terminus KM389_09230 PF02885 Glycosyl transferase family, helical bundle domain KM389_09230 PF00591 Glycosyl transferase family, a/b domain KM389_09230 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM389_09235 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM389_09245 PF05979 Bacterial protein of unknown function (DUF896) KM389_09265 PF05195 Aminopeptidase P, N-terminal domain KM389_09265 PF00557 Metallopeptidase family M24 KM389_09270 PF07732 Multicopper oxidase KM389_09270 PF07731 Multicopper oxidase KM389_09275 PF01551 Peptidase family M23 KM389_09285 PF13342 C-terminal repeat of topoisomerase KM389_09285 PF01751 Toprim domain KM389_09285 PF01131 DNA topoisomerase KM389_09285 PF01396 Topoisomerase DNA binding C4 zinc finger KM389_09300 PF02525 Flavodoxin-like fold KM389_09315 PF05425 Copper resistance protein D KM389_09315 PF04234 CopC domain KM389_09315 PF13115 YtkA-like KM389_09320 PF07987 Domain of unkown function (DUF1775) KM389_09330 PF00892 EamA-like transporter family KM389_09335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM389_09335 PF03466 LysR substrate binding domain KM389_09340 PF02082 Transcriptional regulator KM389_09345 PF01323 DSBA-like thioredoxin domain KM389_09350 PF00881 Nitroreductase family KM389_09355 PF01425 Amidase KM389_09360 PF01594 AI-2E family transporter KM389_09365 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM389_09365 PF00056 lactate/malate dehydrogenase, NAD binding domain KM389_09370 PF01593 Flavin containing amine oxidoreductase KM389_09375 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM389_09375 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM389_09390 PF00501 AMP-binding enzyme KM389_09390 PF13193 AMP-binding enzyme C-terminal domain KM389_09395 PF01575 MaoC like domain KM389_09400 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM389_09400 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM389_09410 PF12399 Branched-chain amino acid ATP-binding cassette transporter KM389_09410 PF00005 ABC transporter KM389_09415 PF00005 ABC transporter KM389_09420 PF02653 Branched-chain amino acid transport system / permease component KM389_09430 PF03466 LysR substrate binding domain KM389_09430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM389_09450 PF01047 MarR family KM389_09460 PF01654 Cytochrome bd terminal oxidase subunit I KM389_09465 PF02322 Cytochrome bd terminal oxidase subunit II KM389_09470 PF00664 ABC transporter transmembrane region KM389_09470 PF00005 ABC transporter KM389_09475 PF00664 ABC transporter transmembrane region KM389_09475 PF00005 ABC transporter KM389_09490 PF02016 LD-carboxypeptidase N-terminal domain KM389_09490 PF17676 LD-carboxypeptidase C-terminal domain KM389_09495 PF00768 D-alanyl-D-alanine carboxypeptidase KM389_09495 PF07943 Penicillin-binding protein 5, C-terminal domain KM389_09510 PF01476 LysM domain KM389_09510 PF00877 NlpC/P60 family KM389_09525 PF00072 Response regulator receiver domain KM389_09525 PF00486 Transcriptional regulatory protein, C terminal KM389_09530 PF00512 His Kinase A (phospho-acceptor) domain KM389_09530 PF00989 PAS fold KM389_09530 PF16736 Single Cache-like KM389_09530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_09540 PF00106 short chain dehydrogenase KM389_09550 PF04439 Streptomycin adenylyltransferase KM389_09555 PF01522 Polysaccharide deacetylase KM389_09575 PF01842 ACT domain KM389_09575 PF00742 Homoserine dehydrogenase KM389_09575 PF03447 Homoserine dehydrogenase, NAD binding domain KM389_09580 PF00291 Pyridoxal-phosphate dependent enzyme KM389_09585 PF08544 GHMP kinases C terminal KM389_09585 PF00288 GHMP kinases N terminal domain KM389_09600 PF03816 Cell envelope-related transcriptional attenuator domain KM389_09610 PF00072 Response regulator receiver domain KM389_09610 PF00486 Transcriptional regulatory protein, C terminal KM389_09615 PF16736 Single Cache-like KM389_09615 PF00989 PAS fold KM389_09615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_09615 PF00512 His Kinase A (phospho-acceptor) domain KM389_09620 PF01522 Polysaccharide deacetylase KM389_09630 PF02308 MgtC family KM389_09635 PF00583 Acetyltransferase (GNAT) family KM389_09640 PF04183 IucA / IucC family KM389_09640 PF06276 Ferric iron reductase FhuF-like transporter KM389_09645 PF04183 IucA / IucC family KM389_09645 PF06276 Ferric iron reductase FhuF-like transporter KM389_09650 PF13193 AMP-binding enzyme C-terminal domain KM389_09650 PF00501 AMP-binding enzyme KM389_09665 PF01261 Xylose isomerase-like TIM barrel KM389_09670 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM389_09680 PF01810 LysE type translocator KM389_09690 PF01734 Patatin-like phospholipase KM389_09715 PF13344 Haloacid dehalogenase-like hydrolase KM389_09715 PF00293 NUDIX domain KM389_09720 PF02540 NAD synthase KM389_09730 PF18277 AbrB C-terminal domain KM389_09730 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM389_09735 PF00082 Subtilase family KM389_09740 PF01022 Bacterial regulatory protein, arsR family KM389_09745 PF00248 Aldo/keto reductase family KM389_09750 PF07690 Major Facilitator Superfamily KM389_09770 PF03193 RsgA GTPase KM389_09775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM389_09775 PF00672 HAMP domain KM389_09775 PF02743 Cache domain KM389_09795 PF00210 Ferritin-like domain KM389_09810 PF00296 Luciferase-like monooxygenase KM389_09820 PF01593 Flavin containing amine oxidoreductase KM389_09830 PF00248 Aldo/keto reductase family KM389_09835 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM389_09835 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM389_09840 PF00583 Acetyltransferase (GNAT) family KM389_09895 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM389_09895 PF01297 Zinc-uptake complex component A periplasmic KM389_09905 PF13460 NAD(P)H-binding KM389_09910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM389_09915 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM389_09915 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM389_09925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_09930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM389_09940 PF00300 Histidine phosphatase superfamily (branch 1) KM389_09950 PF08757 CotH kinase protein KM389_09955 PF00293 NUDIX domain KM389_09960 PF09335 SNARE associated Golgi protein KM389_09965 PF14667 Polysaccharide biosynthesis C-terminal domain KM389_09965 PF01943 Polysaccharide biosynthesis protein KM389_09975 PF03773 Predicted permease KM389_09980 PF09323 Domain of unknown function (DUF1980) KM389_09985 PF03061 Thioesterase superfamily KM389_09995 PF13091 PLD-like domain KM389_09995 PF13396 Phospholipase_D-nuclease N-terminal KM389_10010 PF13460 NAD(P)H-binding KM389_10015 PF04306 Protein of unknown function (DUF456) KM389_10020 PF01595 Cyclin M transmembrane N-terminal domain KM389_10020 PF03471 Transporter associated domain KM389_10020 PF00571 CBS domain KM389_10035 PF05525 Branched-chain amino acid transport protein KM389_10040 PF01588 Putative tRNA binding domain KM389_10060 PF07454 Stage II sporulation protein P (SpoIIP) KM389_10070 PF02557 D-alanyl-D-alanine carboxypeptidase KM389_10080 PF01425 Amidase KM389_10085 PF07690 Major Facilitator Superfamily KM389_10095 PF01145 SPFH domain / Band 7 family KM389_10100 PF00300 Histidine phosphatase superfamily (branch 1) KM389_10115 PF00842 Alanine racemase, C-terminal domain KM389_10115 PF01168 Alanine racemase, N-terminal domain KM389_10120 PF13847 Methyltransferase domain KM389_10135 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM389_10140 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM389_10140 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM389_10145 PF00392 Bacterial regulatory proteins, gntR family KM389_10145 PF00155 Aminotransferase class I and II KM389_10170 PF00583 Acetyltransferase (GNAT) family KM389_10220 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM389_10245 PF01209 ubiE/COQ5 methyltransferase family KM389_10250 PF01268 Formate--tetrahydrofolate ligase KM389_10260 PF00270 DEAD/DEAH box helicase KM389_10260 PF00271 Helicase conserved C-terminal domain KM389_10270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM389_10280 PF08240 Alcohol dehydrogenase GroES-like domain KM389_10280 PF00107 Zinc-binding dehydrogenase KM389_10285 PF04542 Sigma-70 region 2 KM389_10285 PF08281 Sigma-70, region 4 KM389_10310 PF00255 Glutathione peroxidase KM389_10315 PF13559 Domain of unknown function (DUF4129) KM389_10315 PF11992 Domain of unknown function (DUF3488) KM389_10315 PF01841 Transglutaminase-like superfamily KM389_10320 PF01882 Protein of unknown function DUF58 KM389_10325 PF17863 AAA lid domain KM389_10325 PF07726 ATPase family associated with various cellular activities (AAA) KM389_10340 PF00384 Molybdopterin oxidoreductase KM389_10340 PF14710 Respiratory nitrate reductase alpha N-terminal KM389_10340 PF01568 Molydopterin dinucleotide binding domain KM389_10345 PF13247 4Fe-4S dicluster domain KM389_10345 PF14711 Respiratory nitrate reductase beta C-terminal KM389_10350 PF02613 Nitrate reductase delta subunit KM389_10355 PF02665 Nitrate reductase gamma subunit KM389_10360 PF00155 Aminotransferase class I and II KM389_10360 PF00392 Bacterial regulatory proteins, gntR family KM389_10365 PF00005 ABC transporter KM389_10375 PF00027 Cyclic nucleotide-binding domain KM389_10375 PF00325 Bacterial regulatory proteins, crp family KM389_10380 PF04055 Radical SAM superfamily KM389_10380 PF06463 Molybdenum Cofactor Synthesis C KM389_10385 PF00899 ThiF family KM389_10390 PF00994 Probable molybdopterin binding domain KM389_10390 PF03454 MoeA C-terminal region (domain IV) KM389_10390 PF03453 MoeA N-terminal region (domain I and II) KM389_10395 PF02391 MoaE protein KM389_10405 PF07690 Major Facilitator Superfamily KM389_10425 PF01903 CbiX KM389_10430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM389_10435 PF00355 Rieske [2Fe-2S] domain KM389_10440 PF18267 Rubredoxin NAD+ reductase C-terminal domain KM389_10440 PF04324 BFD-like [2Fe-2S] binding domain KM389_10440 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM389_10440 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM389_10440 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_10445 PF01814 Hemerythrin HHE cation binding domain KM389_10445 PF04405 Domain of Unknown function (DUF542) KM389_10480 PF04232 Stage V sporulation protein S (SpoVS) KM389_10495 PF01510 N-acetylmuramoyl-L-alanine amidase KM389_10510 PF01966 HD domain KM389_10515 PF12848 ABC transporter KM389_10515 PF00005 ABC transporter KM389_10515 PF16326 ABC transporter C-terminal domain KM389_10530 PF00436 Single-strand binding protein family KM389_10535 PF00440 Bacterial regulatory proteins, tetR family KM389_10545 PF13769 Virulence factor KM389_10545 PF08712 Scaffold protein Nfu/NifU N terminal KM389_10555 PF06491 Disulphide isomerase KM389_10560 PF04445 Putative SAM-dependent methyltransferase KM389_10565 PF05746 DALR anticodon binding domain KM389_10565 PF00750 tRNA synthetases class I (R) KM389_10565 PF03485 Arginyl tRNA synthetase N terminal domain KM389_10590 PF00133 tRNA synthetases class I (I, L, M and V) KM389_10590 PF08264 Anticodon-binding domain of tRNA KM389_10610 PF00152 tRNA synthetases class II (D, K and N) KM389_10610 PF01336 OB-fold nucleic acid binding domain KM389_10700 PF02595 Glycerate kinase family KM389_10705 PF00939 Sodium:sulfate symporter transmembrane region KM389_10710 PF00486 Transcriptional regulatory protein, C terminal KM389_10710 PF00072 Response regulator receiver domain KM389_10715 PF00512 His Kinase A (phospho-acceptor) domain KM389_10715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_10715 PF00672 HAMP domain KM389_10730 PF00209 Sodium:neurotransmitter symporter family KM389_10745 PF10997 Alternate to MurJ KM389_10750 PF13419 Haloacid dehalogenase-like hydrolase KM389_10760 PF00465 Iron-containing alcohol dehydrogenase KM389_10765 PF01177 Asp/Glu/Hydantoin racemase KM389_10770 PF01980 tRNA-methyltransferase O KM389_10775 PF00583 Acetyltransferase (GNAT) family KM389_10790 PF00005 ABC transporter KM389_10800 PF14005 YpjP-like protein KM389_10805 PF13419 Haloacid dehalogenase-like hydrolase KM389_10825 PF00144 Beta-lactamase KM389_10825 PF07930 D-aminopeptidase, domain B KM389_10830 PF00303 Thymidylate synthase KM389_10835 PF00186 Dihydrofolate reductase KM389_10840 PF03717 Penicillin-binding Protein dimerisation domain KM389_10840 PF00905 Penicillin binding protein transpeptidase domain KM389_10840 PF05223 NTF2-like N-terminal transpeptidase domain KM389_10845 PF02525 Flavodoxin-like fold KM389_10850 PF01553 Acyltransferase KM389_10855 PF03006 Haemolysin-III related KM389_10860 PF02416 mttA/Hcf106 family KM389_10865 PF00902 Sec-independent protein translocase protein (TatC) KM389_10875 PF02645 Uncharacterised protein, DegV family COG1307 KM389_10885 PF02630 SCO1/SenC KM389_10890 PF00011 Hsp20/alpha crystallin family KM389_10895 PF13537 Glutamine amidotransferase domain KM389_10895 PF00733 Asparagine synthase KM389_10910 PF01497 Periplasmic binding protein KM389_10915 PF01063 Amino-transferase class IV KM389_10920 PF00881 Nitroreductase family KM389_10940 PF00293 NUDIX domain KM389_10945 PF00011 Hsp20/alpha crystallin family KM389_10950 PF00924 Mechanosensitive ion channel KM389_10955 PF13185 GAF domain KM389_10955 PF07730 Histidine kinase KM389_10960 PF00072 Response regulator receiver domain KM389_10960 PF00196 Bacterial regulatory proteins, luxR family KM389_10970 PF08240 Alcohol dehydrogenase GroES-like domain KM389_10970 PF00107 Zinc-binding dehydrogenase KM389_10995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM389_10995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM389_11000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM389_11000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM389_11015 PF03358 NADPH-dependent FMN reductase KM389_11030 PF00005 ABC transporter KM389_11030 PF00571 CBS domain KM389_11035 PF00528 Binding-protein-dependent transport system inner membrane component KM389_11040 PF13520 Amino acid permease KM389_11070 PF03471 Transporter associated domain KM389_11070 PF01595 Cyclin M transmembrane N-terminal domain KM389_11070 PF00571 CBS domain KM389_11075 PF00171 Aldehyde dehydrogenase family KM389_11080 PF07997 Protein of unknown function (DUF1694) KM389_11085 PF09385 Histidine kinase N terminal KM389_11095 PF00202 Aminotransferase class-III KM389_11100 PF01144 Coenzyme A transferase KM389_11105 PF01144 Coenzyme A transferase KM389_11110 PF01546 Peptidase family M20/M25/M40 KM389_11110 PF07687 Peptidase dimerisation domain KM389_11115 PF00583 Acetyltransferase (GNAT) family KM389_11120 PF00158 Sigma-54 interaction domain KM389_11120 PF13426 PAS domain KM389_11120 PF02954 Bacterial regulatory protein, Fis family KM389_11125 PF12544 Lysine-2,3-aminomutase KM389_11130 PF14122 YokU-like protein, putative antitoxin KM389_11135 PF06855 YozE SAM-like fold KM389_11150 PF14162 YozD-like protein KM389_11165 PF07070 SpoOM protein KM389_11170 PF01569 PAP2 superfamily KM389_11175 PF16916 Dimerisation domain of Zinc Transporter KM389_11175 PF01545 Cation efflux family KM389_11180 PF00085 Thioredoxin KM389_11195 PF04740 LXG domain of WXG superfamily KM389_11195 PF14436 Bacterial EndoU nuclease KM389_11200 PF03424 Carbohydrate binding domain (family 17/28) KM389_11200 PF00150 Cellulase (glycosyl hydrolase family 5) KM389_11200 PF00395 S-layer homology domain KM389_11210 PF04471 Restriction endonuclease KM389_11320 PF10676 Spore germination protein gerPA/gerPF KM389_11340 PF00912 Transglycosylase KM389_11340 PF00905 Penicillin binding protein transpeptidase domain KM389_11345 PF07690 Major Facilitator Superfamily KM389_11350 PF01521 Iron-sulphur cluster biosynthesis KM389_11355 PF00285 Citrate synthase, C-terminal domain KM389_11360 PF03972 MmgE/PrpD family KM389_11370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM389_11370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM389_11370 PF02770 Acyl-CoA dehydrogenase, middle domain KM389_11375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM389_11375 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM389_11380 PF00171 Aldehyde dehydrogenase family KM389_11385 PF01810 LysE type translocator KM389_11390 PF00378 Enoyl-CoA hydratase/isomerase KM389_11400 PF10763 Protein of unknown function (DUF2584) KM389_11405 PF00149 Calcineurin-like phosphoesterase KM389_11405 PF12320 Type 5 capsule protein repressor C-terminal domain KM389_11410 PF13476 AAA domain KM389_11420 PF01022 Bacterial regulatory protein, arsR family KM389_11430 PF07690 Major Facilitator Superfamily KM389_11435 PF00106 short chain dehydrogenase KM389_11440 PF00425 chorismate binding enzyme KM389_11445 PF13193 AMP-binding enzyme C-terminal domain KM389_11445 PF00501 AMP-binding enzyme KM389_11450 PF00857 Isochorismatase family KM389_11450 PF00550 Phosphopantetheine attachment site KM389_11455 PF00501 AMP-binding enzyme KM389_11455 PF00975 Thioesterase domain KM389_11455 PF00550 Phosphopantetheine attachment site KM389_11455 PF00668 Condensation domain KM389_11455 PF13193 AMP-binding enzyme C-terminal domain KM389_11460 PF03621 MbtH-like protein KM389_11465 PF07690 Major Facilitator Superfamily KM389_11480 PF00216 Bacterial DNA-binding protein KM389_11490 PF05163 DinB family KM389_11495 PF00082 Subtilase family KM389_11500 PF01235 Sodium:alanine symporter family KM389_11515 PF16291 Domain of unknown function (DUF4937 KM389_11520 PF00849 RNA pseudouridylate synthase KM389_11520 PF01479 S4 domain KM389_11525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM389_11525 PF03129 Anticodon binding domain KM389_11525 PF02824 TGS domain KM389_11525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM389_11540 PF12146 Serine aminopeptidase, S33 KM389_11545 PF07690 Major Facilitator Superfamily KM389_11565 PF13649 Methyltransferase domain KM389_11610 PF00753 Metallo-beta-lactamase superfamily KM389_11610 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM389_11620 PF03176 MMPL family KM389_11630 PF00302 Chloramphenicol acetyltransferase KM389_11645 PF00583 Acetyltransferase (GNAT) family KM389_11675 PF01593 Flavin containing amine oxidoreductase KM389_11685 PF13302 Acetyltransferase (GNAT) domain KM389_11695 PF00313 'Cold-shock' DNA-binding domain KM389_11760 PF03466 LysR substrate binding domain KM389_11760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM389_11765 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM389_11765 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM389_11780 PF03466 LysR substrate binding domain KM389_11780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM389_11785 PF03473 MOSC domain KM389_11785 PF03475 3-alpha domain KM389_11800 PF00664 ABC transporter transmembrane region KM389_11800 PF00005 ABC transporter KM389_11805 PF00664 ABC transporter transmembrane region KM389_11805 PF00005 ABC transporter KM389_11820 PF01810 LysE type translocator KM389_11825 PF07883 Cupin domain KM389_11825 PF01381 Helix-turn-helix KM389_11850 PF00890 FAD binding domain KM389_11855 PF04542 Sigma-70 region 2 KM389_11855 PF08281 Sigma-70, region 4 KM389_11855 PF12680 SnoaL-like domain KM389_11880 PF02638 Glycosyl hydrolase-like 10 KM389_11890 PF02378 Phosphotransferase system, EIIC KM389_11900 PF03702 Anhydro-N-acetylmuramic acid kinase KM389_11905 PF01869 BadF/BadG/BcrA/BcrD ATPase family KM389_11910 PF02660 Glycerol-3-phosphate acyltransferase KM389_11915 PF00266 Aminotransferase class-V KM389_11920 PF00291 Pyridoxal-phosphate dependent enzyme KM389_11935 PF00753 Metallo-beta-lactamase superfamily KM389_11935 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM389_11950 PF00271 Helicase conserved C-terminal domain KM389_11950 PF00270 DEAD/DEAH box helicase KM389_11965 PF00440 Bacterial regulatory proteins, tetR family KM389_11965 PF17932 Tetracyclin repressor-like, C-terminal domain KM389_11980 PF00005 ABC transporter KM389_11980 PF12704 MacB-like periplasmic core domain KM389_11980 PF02687 FtsX-like permease family KM389_11985 PF03848 Tellurite resistance protein TehB KM389_11985 PF09313 Domain of unknown function (DUF1971) KM389_11995 PF08241 Methyltransferase domain KM389_12000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM389_12000 PF00205 Thiamine pyrophosphate enzyme, central domain KM389_12000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM389_12005 PF12802 MarR family KM389_12010 PF00300 Histidine phosphatase superfamily (branch 1) KM389_12015 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KM389_12045 PF07687 Peptidase dimerisation domain KM389_12045 PF01546 Peptidase family M20/M25/M40 KM389_12060 PF04542 Sigma-70 region 2 KM389_12060 PF08281 Sigma-70, region 4 KM389_12070 PF00905 Penicillin binding protein transpeptidase domain KM389_12070 PF03717 Penicillin-binding Protein dimerisation domain KM389_12085 PF01569 PAP2 superfamily KM389_12090 PF00356 Bacterial regulatory proteins, lacI family KM389_12095 PF07690 Major Facilitator Superfamily KM389_12100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM389_12100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM389_12105 PF00294 pfkB family carbohydrate kinase KM389_12110 PF00171 Aldehyde dehydrogenase family KM389_12115 PF00205 Thiamine pyrophosphate enzyme, central domain KM389_12115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM389_12115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM389_12120 PF01261 Xylose isomerase-like TIM barrel KM389_12125 PF01116 Fructose-bisphosphate aldolase class-II KM389_12130 PF04962 KduI/IolB family KM389_12155 PF18801 response regulator aspartate phosphatase H, N terminal KM389_12160 PF01381 Helix-turn-helix KM389_12175 PF02557 D-alanyl-D-alanine carboxypeptidase KM389_12185 PF01520 N-acetylmuramoyl-L-alanine amidase KM389_12185 PF00395 S-layer homology domain KM389_12195 PF00440 Bacterial regulatory proteins, tetR family KM389_12200 PF00005 ABC transporter KM389_12200 PF16326 ABC transporter C-terminal domain KM389_12210 PF00563 EAL domain KM389_12210 PF00990 Diguanylate cyclase, GGDEF domain KM389_12210 PF03707 Bacterial signalling protein N terminal repeat KM389_12215 PF13302 Acetyltransferase (GNAT) domain KM389_12230 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_12235 PF00581 Rhodanese-like domain KM389_12250 PF00005 ABC transporter KM389_12260 PF00440 Bacterial regulatory proteins, tetR family KM389_12260 PF08359 YsiA-like protein, C-terminal region KM389_12275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM389_12275 PF02770 Acyl-CoA dehydrogenase, middle domain KM389_12275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM389_12280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM389_12280 PF00289 Biotin carboxylase, N-terminal domain KM389_12280 PF02785 Biotin carboxylase C-terminal domain KM389_12285 PF00364 Biotin-requiring enzyme KM389_12290 PF00682 HMGL-like KM389_12295 PF00378 Enoyl-CoA hydratase/isomerase KM389_12300 PF01039 Carboxyl transferase domain KM389_12305 PF00501 AMP-binding enzyme KM389_12305 PF16177 Acetyl-coenzyme A synthetase N-terminus KM389_12305 PF13193 AMP-binding enzyme C-terminal domain KM389_12315 PF00583 Acetyltransferase (GNAT) family KM389_12320 PF00485 Phosphoribulokinase / Uridine kinase family KM389_12330 PF05163 DinB family KM389_12335 PF00768 D-alanyl-D-alanine carboxypeptidase KM389_12335 PF07943 Penicillin-binding protein 5, C-terminal domain KM389_12340 PF00512 His Kinase A (phospho-acceptor) domain KM389_12340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_12345 PF00486 Transcriptional regulatory protein, C terminal KM389_12345 PF00072 Response regulator receiver domain KM389_12350 PF01966 HD domain KM389_12355 PF13021 Domain of unknown function (DUF3885) KM389_12360 PF01048 Phosphorylase superfamily KM389_12400 PF17755 UvrA DNA-binding domain KM389_12400 PF17760 UvrA interaction domain KM389_12400 PF17755 UvrA DNA-binding domain KM389_12400 PF17760 UvrA interaction domain KM389_12415 PF00144 Beta-lactamase KM389_12420 PF00376 MerR family regulatory protein KM389_12420 PF09278 MerR, DNA binding KM389_12425 PF07690 Major Facilitator Superfamily KM389_12445 PF01636 Phosphotransferase enzyme family KM389_12450 PF12833 Helix-turn-helix domain KM389_12465 PF00155 Aminotransferase class I and II KM389_12465 PF00392 Bacterial regulatory proteins, gntR family KM389_12480 PF00107 Zinc-binding dehydrogenase KM389_12480 PF08240 Alcohol dehydrogenase GroES-like domain KM389_12510 PF07486 Cell Wall Hydrolase KM389_12520 PF00072 Response regulator receiver domain KM389_12520 PF00486 Transcriptional regulatory protein, C terminal KM389_12535 PF12848 ABC transporter KM389_12535 PF00005 ABC transporter KM389_12550 PF00005 ABC transporter KM389_12575 PF01842 ACT domain KM389_12575 PF03447 Homoserine dehydrogenase, NAD binding domain KM389_12575 PF00742 Homoserine dehydrogenase KM389_12580 PF00155 Aminotransferase class I and II KM389_12580 PF00392 Bacterial regulatory proteins, gntR family KM389_12585 PF01820 D-ala D-ala ligase N-terminus KM389_12585 PF07478 D-ala D-ala ligase C-terminus KM389_12590 PF03070 TENA/THI-4/PQQC family KM389_12655 PF00067 Cytochrome P450 KM389_12665 PF00132 Bacterial transferase hexapeptide (six repeats) KM389_12670 PF07561 Domain of Unknown Function (DUF1540) KM389_12680 PF00067 Cytochrome P450 KM389_12700 PF13426 PAS domain KM389_12700 PF13188 PAS domain KM389_12700 PF00989 PAS fold KM389_12700 PF00512 His Kinase A (phospho-acceptor) domain KM389_12700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_12705 PF03717 Penicillin-binding Protein dimerisation domain KM389_12705 PF00905 Penicillin binding protein transpeptidase domain KM389_12710 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM389_12715 PF01177 Asp/Glu/Hydantoin racemase KM389_12720 PF07155 ECF-type riboflavin transporter, S component KM389_12725 PF12558 ATP-binding cassette cobalt transporter KM389_12725 PF00005 ABC transporter KM389_12740 PF00512 His Kinase A (phospho-acceptor) domain KM389_12740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_12750 PF04229 GrpB protein KM389_12755 PF00107 Zinc-binding dehydrogenase KM389_12755 PF08240 Alcohol dehydrogenase GroES-like domain KM389_12760 PF03793 PASTA domain KM389_12760 PF00905 Penicillin binding protein transpeptidase domain KM389_12760 PF03717 Penicillin-binding Protein dimerisation domain KM389_12770 PF11954 Domain of unknown function (DUF3471) KM389_12770 PF00144 Beta-lactamase KM389_12805 PF01965 DJ-1/PfpI family KM389_12820 PF00144 Beta-lactamase KM389_12835 PF07690 Major Facilitator Superfamily KM389_12850 PF03009 Glycerophosphoryl diester phosphodiesterase family KM389_12870 PF00892 EamA-like transporter family KM389_12875 PF01270 Glycosyl hydrolases family 8 KM389_12885 PF00293 NUDIX domain KM389_12895 PF00144 Beta-lactamase KM389_12905 PF07690 Major Facilitator Superfamily KM389_12920 PF00293 NUDIX domain KM389_12920 PF09297 NADH pyrophosphatase zinc ribbon domain KM389_12925 PF02768 DNA polymerase III beta subunit, C-terminal domain KM389_12925 PF02767 DNA polymerase III beta subunit, central domain KM389_12925 PF00712 DNA polymerase III beta subunit, N-terminal domain KM389_12930 PF00293 NUDIX domain KM389_12945 PF12706 Beta-lactamase superfamily domain KM389_12965 PF09234 Domain of unknown function (DUF1963) KM389_12990 PF08000 Bacterial PH domain KM389_13000 PF12867 DinB superfamily KM389_13015 PF02673 Bacitracin resistance protein BacA KM389_13025 PF01541 GIY-YIG catalytic domain KM389_13065 PF01266 FAD dependent oxidoreductase KM389_13090 PF13419 Haloacid dehalogenase-like hydrolase KM389_13110 PF00282 Pyridoxal-dependent decarboxylase conserved domain KM389_13115 PF00550 Phosphopantetheine attachment site KM389_13115 PF00668 Condensation domain KM389_13115 PF13193 AMP-binding enzyme C-terminal domain KM389_13115 PF00501 AMP-binding enzyme KM389_13125 PF03714 Bacterial pullanase-associated domain KM389_13125 PF00128 Alpha amylase, catalytic domain KM389_13125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM389_13130 PF01447 Thermolysin metallopeptidase, catalytic domain KM389_13130 PF03413 Peptidase propeptide and YPEB domain KM389_13130 PF07504 Fungalysin/Thermolysin Propeptide Motif KM389_13130 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM389_13150 PF00344 SecY translocase KM389_13155 PF00308 Bacterial dnaA protein KM389_13155 PF08299 Bacterial dnaA protein helix-turn-helix KM389_13155 PF11638 DnaA N-terminal domain KM389_13160 PF00892 EamA-like transporter family KM389_13165 PF00392 Bacterial regulatory proteins, gntR family KM389_13165 PF00155 Aminotransferase class I and II KM389_13170 PF00561 alpha/beta hydrolase fold KM389_13195 PF06081 Aromatic acid exporter family member 1 KM389_13210 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM389_13215 PF03413 Peptidase propeptide and YPEB domain KM389_13215 PF14620 YpeB sporulation KM389_13220 PF07486 Cell Wall Hydrolase KM389_13220 PF01471 Putative peptidoglycan binding domain KM389_13235 PF03301 Tryptophan 2,3-dioxygenase KM389_13240 PF04199 Putative cyclase KM389_13245 PF00266 Aminotransferase class-V KM389_13250 PF08359 YsiA-like protein, C-terminal region KM389_13250 PF00440 Bacterial regulatory proteins, tetR family KM389_13255 PF00293 NUDIX domain KM389_13255 PF13344 Haloacid dehalogenase-like hydrolase KM389_13280 PF01590 GAF domain KM389_13280 PF02954 Bacterial regulatory protein, Fis family KM389_13280 PF00158 Sigma-54 interaction domain KM389_13295 PF13302 Acetyltransferase (GNAT) domain KM389_13300 PF00455 DeoR C terminal sensor domain KM389_13300 PF08220 DeoR-like helix-turn-helix domain KM389_13315 PF00403 Heavy-metal-associated domain KM389_13315 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_13315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM389_13320 PF02082 Transcriptional regulator KM389_13335 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_13335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM389_13340 PF02817 e3 binding domain KM389_13340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM389_13340 PF00364 Biotin-requiring enzyme KM389_13345 PF02779 Transketolase, pyrimidine binding domain KM389_13345 PF02780 Transketolase, C-terminal domain KM389_13350 PF00676 Dehydrogenase E1 component KM389_13360 PF00106 short chain dehydrogenase KM389_13365 PF13673 Acetyltransferase (GNAT) domain KM389_13365 PF04229 GrpB protein KM389_13400 PF00005 ABC transporter KM389_13400 PF00571 CBS domain KM389_13405 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KM389_13410 PF00574 Clp protease KM389_13425 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KM389_13430 PF13673 Acetyltransferase (GNAT) domain KM389_13435 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM389_13435 PF18416 N-acetylglucosamine binding protein domain 2 KM389_13450 PF10990 Protein of unknown function (DUF2809) KM389_13475 PF13567 Domain of unknown function (DUF4131) KM389_13475 PF00753 Metallo-beta-lactamase superfamily KM389_13475 PF03772 Competence protein KM389_13525 PF13538 UvrD-like helicase C-terminal domain KM389_13540 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KM389_13545 PF00270 DEAD/DEAH box helicase KM389_13545 PF00271 Helicase conserved C-terminal domain KM389_13545 PF00570 HRDC domain KM389_13545 PF16124 RecQ zinc-binding KM389_13545 PF09382 RQC domain KM389_13585 PF01368 DHH family KM389_13585 PF02833 DHHA2 domain KM389_13590 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM389_13590 PF18416 N-acetylglucosamine binding protein domain 2 KM389_13605 PF02627 Carboxymuconolactone decarboxylase family KM389_13610 PF01235 Sodium:alanine symporter family KM389_13615 PF00171 Aldehyde dehydrogenase family KM389_13620 PF00701 Dihydrodipicolinate synthetase family KM389_13625 PF05544 Proline racemase KM389_13630 PF05544 Proline racemase KM389_13635 PF01266 FAD dependent oxidoreductase KM389_13640 PF02954 Bacterial regulatory protein, Fis family KM389_13640 PF13188 PAS domain KM389_13640 PF00158 Sigma-54 interaction domain KM389_13655 PF04324 BFD-like [2Fe-2S] binding domain KM389_13655 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_13670 PF08876 Domain of unknown function (DUF1836) KM389_13675 PF09335 SNARE associated Golgi protein KM389_13690 PF04914 DltD protein KM389_13695 PF03352 Methyladenine glycosylase KM389_13695 PF00117 Glutamine amidotransferase class-I KM389_13695 PF13302 Acetyltransferase (GNAT) domain KM389_13695 PF00958 GMP synthase C terminal domain KM389_13695 PF13673 Acetyltransferase (GNAT) domain KM389_13700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_13705 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain KM389_13705 PF00877 NlpC/P60 family KM389_13710 PF13378 Enolase C-terminal domain-like KM389_13710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM389_13730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM389_13755 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KM389_13755 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KM389_13760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_13760 PF16736 Single Cache-like KM389_13760 PF00989 PAS fold KM389_13760 PF00512 His Kinase A (phospho-acceptor) domain KM389_13785 PF01048 Phosphorylase superfamily KM389_13795 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM389_13800 PF01432 Peptidase family M3 KM389_13800 PF08439 Oligopeptidase F KM389_13815 PF02645 Uncharacterised protein, DegV family COG1307 KM389_13835 PF07690 Major Facilitator Superfamily KM389_13845 PF04519 Polymer-forming cytoskeletal KM389_13850 PF13171 Protein of unknown function (DUF4004) KM389_13855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_13855 PF12793 Sugar transport-related sRNA regulator N-term KM389_13860 PF07690 Major Facilitator Superfamily KM389_13880 PF04226 Transglycosylase associated protein KM389_13885 PF01156 Inosine-uridine preferring nucleoside hydrolase KM389_13895 PF08241 Methyltransferase domain KM389_13930 PF00155 Aminotransferase class I and II KM389_13935 PF07977 FabA-like domain KM389_13940 PF03630 Fumble KM389_13960 PF00005 ABC transporter KM389_14005 PF01594 AI-2E family transporter KM389_14015 PF00296 Luciferase-like monooxygenase KM389_14020 PF00528 Binding-protein-dependent transport system inner membrane component KM389_14025 PF09084 NMT1/THI5 like KM389_14030 PF00005 ABC transporter KM389_14050 PF00293 NUDIX domain KM389_14050 PF09297 NADH pyrophosphatase zinc ribbon domain KM389_14095 PF13536 Putative multidrug resistance efflux transporter KM389_14100 PF12867 DinB superfamily KM389_14120 PF08713 DNA alkylation repair enzyme KM389_14130 PF01522 Polysaccharide deacetylase KM389_14140 PF03741 Integral membrane protein TerC family KM389_14145 PF00884 Sulfatase KM389_14150 PF00005 ABC transporter KM389_14150 PF12848 ABC transporter KM389_14160 PF03176 MMPL family KM389_14165 PF03176 MMPL family KM389_14170 PF03176 MMPL family KM389_14175 PF16295 Tetracyclin repressor-like, C-terminal domain KM389_14175 PF00440 Bacterial regulatory proteins, tetR family KM389_14185 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM389_14190 PF02153 Prephenate dehydrogenase KM389_14190 PF01842 ACT domain KM389_14195 PF00155 Aminotransferase class I and II KM389_14200 PF01264 Chorismate synthase KM389_14205 PF01817 Chorismate mutase type II KM389_14205 PF00793 DAHP synthetase I family KM389_14225 PF01636 Phosphotransferase enzyme family KM389_14240 PF01476 LysM domain KM389_14240 PF06725 3D domain KM389_14250 PF04542 Sigma-70 region 2 KM389_14250 PF08281 Sigma-70, region 4 KM389_14270 PF06039 Malate:quinone oxidoreductase (Mqo) KM389_14275 PF13407 Periplasmic binding protein domain KM389_14280 PF02653 Branched-chain amino acid transport system / permease component KM389_14285 PF02653 Branched-chain amino acid transport system / permease component KM389_14290 PF00005 ABC transporter KM389_14295 PF04198 Putative sugar-binding domain KM389_14295 PF00325 Bacterial regulatory proteins, crp family KM389_14310 PF01791 DeoC/LacD family aldolase KM389_14330 PF03992 Antibiotic biosynthesis monooxygenase KM389_14350 PF07662 Na+ dependent nucleoside transporter C-terminus KM389_14350 PF01773 Na+ dependent nucleoside transporter N-terminus KM389_14355 PF00171 Aldehyde dehydrogenase family KM389_14360 PF00696 Amino acid kinase family KM389_14360 PF01472 PUA domain KM389_14365 PF03807 NADP oxidoreductase coenzyme F420-dependent KM389_14365 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM389_14370 PF01546 Peptidase family M20/M25/M40 KM389_14375 PF01614 Bacterial transcriptional regulator KM389_14375 PF09339 IclR helix-turn-helix domain KM389_14380 PF00324 Amino acid permease KM389_14385 PF01139 tRNA-splicing ligase RtcB KM389_14390 PF00487 Fatty acid desaturase KM389_14395 PF00245 Alkaline phosphatase KM389_14400 PF11188 Protein of unknown function (DUF2975) KM389_14405 PF13443 Cro/C1-type HTH DNA-binding domain KM389_14420 PF10086 YhfC intramembrane metalloprotease KM389_14430 PF04397 LytTr DNA-binding domain KM389_14430 PF00072 Response regulator receiver domain KM389_14440 PF13302 Acetyltransferase (GNAT) domain KM389_14445 PF12681 Glyoxalase-like domain KM389_14465 PF17863 AAA lid domain KM389_14465 PF07726 ATPase family associated with various cellular activities (AAA) KM389_14480 PF07690 Major Facilitator Superfamily KM389_14490 PF00535 Glycosyl transferase family 2 KM389_14505 PF00535 Glycosyl transferase family 2 KM389_14515 PF00535 Glycosyl transferase family 2 KM389_14525 PF00202 Aminotransferase class-III KM389_14530 PF00199 Catalase KM389_14530 PF06628 Catalase-related immune-responsive KM389_14540 PF13382 Adenine deaminase C-terminal domain KM389_14540 PF01979 Amidohydrolase family KM389_14545 PF00144 Beta-lactamase KM389_14565 PF07726 ATPase family associated with various cellular activities (AAA) KM389_14565 PF17863 AAA lid domain KM389_14575 PF00881 Nitroreductase family KM389_14580 PF01047 MarR family KM389_14585 PF00009 Elongation factor Tu GTP binding domain KM389_14585 PF03764 Elongation factor G, domain IV KM389_14585 PF14492 Elongation Factor G, domain II KM389_14585 PF00679 Elongation factor G C-terminus KM389_14595 PF00293 NUDIX domain KM389_14610 PF00005 ABC transporter KM389_14615 PF00392 Bacterial regulatory proteins, gntR family KM389_14625 PF12704 MacB-like periplasmic core domain KM389_14625 PF02687 FtsX-like permease family KM389_14625 PF00005 ABC transporter KM389_14650 PF12833 Helix-turn-helix domain KM389_14655 PF00583 Acetyltransferase (GNAT) family KM389_14670 PF00892 EamA-like transporter family KM389_14675 PF00392 Bacterial regulatory proteins, gntR family KM389_14675 PF00155 Aminotransferase class I and II KM389_14680 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KM389_14685 PF13031 Protein of unknown function (DUF3892) KM389_14695 PF00512 His Kinase A (phospho-acceptor) domain KM389_14695 PF00672 HAMP domain KM389_14700 PF00486 Transcriptional regulatory protein, C terminal KM389_14700 PF00072 Response regulator receiver domain KM389_14705 PF00561 alpha/beta hydrolase fold KM389_14735 PF01925 Sulfite exporter TauE/SafE KM389_14740 PF13302 Acetyltransferase (GNAT) domain KM389_14745 PF00324 Amino acid permease KM389_14755 PF08713 DNA alkylation repair enzyme KM389_14760 PF10898 Protein of unknown function (DUF2716) KM389_14780 PF00293 NUDIX domain KM389_14790 PF10502 Signal peptidase, peptidase S26 KM389_14795 PF00905 Penicillin binding protein transpeptidase domain KM389_14795 PF03717 Penicillin-binding Protein dimerisation domain KM389_14805 PF02146 Sir2 family KM389_14810 PF01470 Pyroglutamyl peptidase KM389_14830 PF03746 LamB/YcsF family KM389_14835 PF02626 Carboxyltransferase domain, subdomain A and B KM389_14840 PF02682 Carboxyltransferase domain, subdomain C and D KM389_14845 PF01614 Bacterial transcriptional regulator KM389_14845 PF09339 IclR helix-turn-helix domain KM389_14850 PF10502 Signal peptidase, peptidase S26 KM389_14855 PF03932 CutC family KM389_14860 PF07454 Stage II sporulation protein P (SpoIIP) KM389_14875 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KM389_14875 PF02770 Acyl-CoA dehydrogenase, middle domain KM389_14875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM389_14890 PF07670 Nucleoside recognition KM389_14905 PF02915 Rubrerythrin KM389_14915 PF00440 Bacterial regulatory proteins, tetR family KM389_14920 PF00391 PEP-utilising enzyme, mobile domain KM389_14920 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KM389_14925 PF00753 Metallo-beta-lactamase superfamily KM389_14940 PF07875 Coat F domain KM389_14945 PF08892 YqcI/YcgG family KM389_14950 PF01810 LysE type translocator KM389_14965 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM389_14970 PF10710 Protein of unknown function (DUF2512) KM389_14975 PF11553 Protein of unknown function (DUF3231) KM389_14980 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM389_14985 PF08240 Alcohol dehydrogenase GroES-like domain KM389_14985 PF13823 Alcohol dehydrogenase GroES-associated KM389_14985 PF00107 Zinc-binding dehydrogenase KM389_15000 PF00206 Lyase KM389_15000 PF10415 Fumarase C C-terminus KM389_15005 PF17763 Glutaminase/Asparaginase C-terminal domain KM389_15005 PF00710 Asparaginase, N-terminal KM389_15010 PF01381 Helix-turn-helix KM389_15020 PF02151 UvrB/uvrC motif KM389_15020 PF08459 UvrC Helix-hairpin-helix N-terminal KM389_15020 PF01541 GIY-YIG catalytic domain KM389_15020 PF12826 Helix-hairpin-helix motif KM389_15025 PF13520 Amino acid permease KM389_15030 PF05525 Branched-chain amino acid transport protein KM389_15035 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM389_15035 PF03807 NADP oxidoreductase coenzyme F420-dependent KM389_15040 PF13564 DoxX-like family KM389_15045 PF00390 Malic enzyme, N-terminal domain KM389_15045 PF03949 Malic enzyme, NAD binding domain KM389_15060 PF03845 Spore germination protein KM389_15080 PF04960 Glutaminase KM389_15085 PF01235 Sodium:alanine symporter family KM389_15115 PF00149 Calcineurin-like phosphoesterase KM389_15115 PF02872 5'-nucleotidase, C-terminal domain KM389_15115 PF17936 Bacterial Ig domain KM389_15120 PF00199 Catalase KM389_15120 PF06628 Catalase-related immune-responsive KM389_15125 PF00561 alpha/beta hydrolase fold KM389_15130 PF00857 Isochorismatase family KM389_15150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM389_15150 PF03466 LysR substrate binding domain KM389_15155 PF01047 MarR family KM389_15175 PF11181 Heat induced stress protein YflT KM389_15190 PF03073 TspO/MBR family KM389_15195 PF03441 FAD binding domain of DNA photolyase KM389_15195 PF00875 DNA photolyase KM389_15205 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KM389_15210 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM389_15210 PF00361 Proton-conducting membrane transporter KM389_15215 PF10057 Uncharacterized conserved protein (DUF2294) KM389_15230 PF01040 UbiA prenyltransferase family KM389_15235 PF00561 alpha/beta hydrolase fold KM389_15240 PF01297 Zinc-uptake complex component A periplasmic KM389_15245 PF00950 ABC 3 transport family KM389_15250 PF00005 ABC transporter KM389_15275 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM389_15280 PF01758 Sodium Bile acid symporter family KM389_15285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM389_15290 PF01022 Bacterial regulatory protein, arsR family KM389_15305 PF00012 Hsp70 protein KM389_15320 PF01037 Lrp/AsnC ligand binding domain KM389_15335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM389_15360 PF02805 Metal binding domain of Ada KM389_15360 PF12833 Helix-turn-helix domain KM389_15370 PF00144 Beta-lactamase KM389_15395 PF12802 MarR family KM389_15400 PF00667 FAD binding domain KM389_15400 PF00258 Flavodoxin KM389_15400 PF00175 Oxidoreductase NAD-binding domain KM389_15400 PF00067 Cytochrome P450 KM389_15405 PF07690 Major Facilitator Superfamily KM389_15430 PF00072 Response regulator receiver domain KM389_15430 PF00486 Transcriptional regulatory protein, C terminal KM389_15435 PF00512 His Kinase A (phospho-acceptor) domain KM389_15435 PF00672 HAMP domain KM389_15435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_15460 PF00291 Pyridoxal-phosphate dependent enzyme KM389_15480 PF01381 Helix-turn-helix KM389_15495 PF00753 Metallo-beta-lactamase superfamily KM389_15500 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM389_15510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM389_15510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM389_15515 PF04072 Leucine carboxyl methyltransferase KM389_15530 PF00005 ABC transporter KM389_15535 PF02687 FtsX-like permease family KM389_15550 PF00672 HAMP domain KM389_15550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_15550 PF00512 His Kinase A (phospho-acceptor) domain KM389_15555 PF00072 Response regulator receiver domain KM389_15555 PF00486 Transcriptional regulatory protein, C terminal KM389_15565 PF01047 MarR family KM389_15575 PF04299 Putative FMN-binding domain KM389_15580 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM389_15580 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM389_15585 PF07690 Major Facilitator Superfamily KM389_15590 PF02589 LUD domain KM389_15595 PF11870 Domain of unknown function (DUF3390) KM389_15595 PF13183 4Fe-4S dicluster domain KM389_15595 PF02589 LUD domain KM389_15600 PF02754 Cysteine-rich domain KM389_15605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM389_15605 PF03466 LysR substrate binding domain KM389_15615 PF02016 LD-carboxypeptidase N-terminal domain KM389_15615 PF17676 LD-carboxypeptidase C-terminal domain KM389_15635 PF07690 Major Facilitator Superfamily KM389_15640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM389_15640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM389_15645 PF05116 Sucrose-6F-phosphate phosphohydrolase KM389_15655 PF00356 Bacterial regulatory proteins, lacI family KM389_15660 PF18801 response regulator aspartate phosphatase H, N terminal KM389_15680 PF00817 impB/mucB/samB family KM389_15680 PF11799 impB/mucB/samB family C-terminal domain KM389_15680 PF11798 IMS family HHH motif KM389_15695 PF02743 Cache domain KM389_15695 PF00672 HAMP domain KM389_15695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM389_15710 PF01554 MatE KM389_15720 PF08453 Peptidase family M9 N-terminal KM389_15720 PF18496 Collagenase G catalytic helper subdomain KM389_15720 PF01752 Collagenase KM389_15730 PF07690 Major Facilitator Superfamily KM389_15735 PF16859 Tetracyclin repressor-like, C-terminal domain KM389_15735 PF00440 Bacterial regulatory proteins, tetR family KM389_15745 PF01022 Bacterial regulatory protein, arsR family KM389_15755 PF03313 Serine dehydratase alpha chain KM389_15760 PF01842 ACT domain KM389_15760 PF03315 Serine dehydratase beta chain KM389_15770 PF00202 Aminotransferase class-III KM389_15775 PF17788 HypF Kae1-like domain KM389_15775 PF01300 Telomere recombination KM389_15775 PF07503 HypF finger KM389_15775 PF00708 Acylphosphatase KM389_15780 PF00586 AIR synthase related protein, N-terminal domain KM389_15780 PF02769 AIR synthase related protein, C-terminal domain KM389_15785 PF00857 Isochorismatase family KM389_15790 PF01037 Lrp/AsnC ligand binding domain KM389_15795 PF13520 Amino acid permease KM389_15810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM389_15810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM389_15810 PF01842 ACT domain KM389_15815 PF00266 Aminotransferase class-V KM389_15830 PF08281 Sigma-70, region 4 KM389_15830 PF04542 Sigma-70 region 2 KM389_15845 PF07883 Cupin domain KM389_15850 PF12833 Helix-turn-helix domain KM389_15850 PF01497 Periplasmic binding protein KM389_15855 PF01804 Penicillin amidase KM389_15895 PF14044 NETI protein KM389_15900 PF07690 Major Facilitator Superfamily KM389_15905 PF12697 Alpha/beta hydrolase family KM389_15910 PF01047 MarR family KM389_15915 PF07690 Major Facilitator Superfamily KM389_15925 PF12679 ABC-2 family transporter protein KM389_15930 PF00005 ABC transporter KM389_15930 PF13732 Domain of unknown function (DUF4162) KM389_15935 PF13396 Phospholipase_D-nuclease N-terminal KM389_15945 PF17314 Family of unknown function (DUF5360) KM389_15950 PF00893 Small Multidrug Resistance protein KM389_15955 PF00440 Bacterial regulatory proteins, tetR family KM389_15960 PF17440 Thiol-activated cytolysin beta sandwich domain KM389_15960 PF01289 Thiol-activated cytolysin KM389_15965 PF02667 Short chain fatty acid transporter KM389_15975 PF02525 Flavodoxin-like fold KM389_15995 PF14256 YwiC-like protein KM389_16005 PF00005 ABC transporter KM389_16010 PF02361 Cobalt transport protein KM389_16025 PF03737 Aldolase/RraA KM389_16030 PF03606 C4-dicarboxylate anaerobic carrier KM389_16035 PF04231 Endonuclease I KM389_16050 PF01381 Helix-turn-helix KM389_16055 PF02660 Glycerol-3-phosphate acyltransferase KM389_16060 PF04073 Aminoacyl-tRNA editing domain KM389_16065 PF03129 Anticodon binding domain KM389_16065 PF13393 Histidyl-tRNA synthetase KM389_16080 PF01638 HxlR-like helix-turn-helix KM389_16085 PF00881 Nitroreductase family KM389_16095 PF00391 PEP-utilising enzyme, mobile domain KM389_16095 PF00224 Pyruvate kinase, barrel domain KM389_16095 PF02887 Pyruvate kinase, alpha/beta domain KM389_16115 PF00005 ABC transporter KM389_16140 PF13419 Haloacid dehalogenase-like hydrolase KM389_16150 PF13350 Tyrosine phosphatase family KM389_16175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM389_16180 PF00480 ROK family KM389_16185 PF07690 Major Facilitator Superfamily KM389_16190 PF14602 Hexapeptide repeat of succinyl-transferase KM389_16190 PF12464 Maltose acetyltransferase KM389_16200 PF00005 ABC transporter KM389_16200 PF02687 FtsX-like permease family KM389_16200 PF12704 MacB-like periplasmic core domain KM389_16210 PF00579 tRNA synthetases class I (W and Y) KM389_16215 PF13288 DXP reductoisomerase C-terminal domain KM389_16215 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM389_16215 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM389_16220 PF01594 AI-2E family transporter KM389_16240 PF08241 Methyltransferase domain KM389_16250 PF07690 Major Facilitator Superfamily KM389_16270 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM389_16280 PF00571 CBS domain KM389_16280 PF03471 Transporter associated domain KM389_16280 PF01595 Cyclin M transmembrane N-terminal domain KM389_16285 PF13411 MerR HTH family regulatory protein KM389_16290 PF00892 EamA-like transporter family KM389_16295 PF00805 Pentapeptide repeats (8 copies) KM389_16300 PF06906 Protein of unknown function (DUF1272) KM389_16305 PF10282 Lactonase, 7-bladed beta-propeller KM389_16310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM389_16310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM389_16315 PF02447 GntP family permease KM389_16320 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM389_16325 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM389_16325 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM389_16330 PF02779 Transketolase, pyrimidine binding domain KM389_16330 PF00456 Transketolase, thiamine diphosphate binding domain KM389_16330 PF02780 Transketolase, C-terminal domain KM389_16335 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM389_16335 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM389_16340 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM389_16340 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM389_16345 PF08240 Alcohol dehydrogenase GroES-like domain KM389_16345 PF00107 Zinc-binding dehydrogenase KM389_16350 PF00296 Luciferase-like monooxygenase KM389_16360 PF14765 Polyketide synthase dehydratase KM389_16360 PF16197 Ketoacyl-synthetase C-terminal extension KM389_16360 PF00550 Phosphopantetheine attachment site KM389_16360 PF08240 Alcohol dehydrogenase GroES-like domain KM389_16360 PF00109 Beta-ketoacyl synthase, N-terminal domain KM389_16360 PF02801 Beta-ketoacyl synthase, C-terminal domain KM389_16360 PF00698 Acyl transferase domain KM389_16360 PF08659 KR domain KM389_16365 PF00106 short chain dehydrogenase KM389_16370 PF03413 Peptidase propeptide and YPEB domain KM389_16370 PF01447 Thermolysin metallopeptidase, catalytic domain KM389_16370 PF07504 Fungalysin/Thermolysin Propeptide Motif KM389_16370 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM389_16390 PF00248 Aldo/keto reductase family KM389_16395 PF07690 Major Facilitator Superfamily KM389_16405 PF03928 Haem-degrading KM389_16410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM389_16440 PF03960 ArsC family KM389_16445 PF01638 HxlR-like helix-turn-helix KM389_16450 PF07702 UTRA domain KM389_16450 PF00392 Bacterial regulatory proteins, gntR family KM389_16465 PF01638 HxlR-like helix-turn-helix KM389_16470 PF01638 HxlR-like helix-turn-helix KM389_16475 PF00248 Aldo/keto reductase family KM389_16505 PF02567 Phenazine biosynthesis-like protein KM389_16525 PF13193 AMP-binding enzyme C-terminal domain KM389_16525 PF00501 AMP-binding enzyme KM389_16535 PF01638 HxlR-like helix-turn-helix KM389_16555 PF01022 Bacterial regulatory protein, arsR family KM389_16565 PF12791 Anti-sigma factor N-terminus KM389_16570 PF04542 Sigma-70 region 2 KM389_16585 PF00440 Bacterial regulatory proteins, tetR family KM389_16605 PF05656 Protein of unknown function (DUF805) KM389_16610 PF01061 ABC-2 type transporter KM389_16615 PF13732 Domain of unknown function (DUF4162) KM389_16615 PF00005 ABC transporter KM389_16630 PF03063 Prismane/CO dehydrogenase family KM389_16640 PF00753 Metallo-beta-lactamase superfamily KM389_16645 PF01471 Putative peptidoglycan binding domain KM389_16645 PF01183 Glycosyl hydrolases family 25 KM389_16670 PF00144 Beta-lactamase KM389_16710 PF00753 Metallo-beta-lactamase superfamily KM389_16715 PF08240 Alcohol dehydrogenase GroES-like domain KM389_16715 PF00107 Zinc-binding dehydrogenase KM389_16720 PF00324 Amino acid permease KM389_16725 PF07690 Major Facilitator Superfamily KM389_16750 PF02585 GlcNAc-PI de-N-acetylase KM389_16755 PF08830 Protein of unknown function (DUF1806) KM389_16760 PF03600 Citrate transporter KM389_16780 PF01497 Periplasmic binding protein KM389_16785 PF01032 FecCD transport family KM389_16790 PF01032 FecCD transport family KM389_16795 PF05675 Protein of unknown function (DUF817) KM389_16800 PF02567 Phenazine biosynthesis-like protein KM389_16805 PF13170 Protein of unknown function (DUF4003) KM389_16820 PF10901 Protein of unknown function (DUF2690) KM389_16830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM389_16830 PF03466 LysR substrate binding domain KM389_16835 PF08240 Alcohol dehydrogenase GroES-like domain KM389_16835 PF00107 Zinc-binding dehydrogenase KM389_16850 PF00488 MutS domain V KM389_16850 PF01713 Smr domain KM389_16860 PF00128 Alpha amylase, catalytic domain KM389_16860 PF09154 Domain of unknown function (DUF1939) KM389_16875 PF00144 Beta-lactamase KM389_16885 PF07690 Major Facilitator Superfamily KM389_16890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM389_16890 PF03466 LysR substrate binding domain KM389_16905 PF03009 Glycerophosphoryl diester phosphodiesterase family KM389_16925 PF01494 FAD binding domain KM389_16930 PF01022 Bacterial regulatory protein, arsR family KM389_16935 PF00107 Zinc-binding dehydrogenase KM389_16935 PF08240 Alcohol dehydrogenase GroES-like domain KM389_16940 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KM389_16955 PF04299 Putative FMN-binding domain KM389_16960 PF04229 GrpB protein KM389_16970 PF01758 Sodium Bile acid symporter family KM389_16975 PF02913 FAD linked oxidases, C-terminal domain KM389_16975 PF01565 FAD binding domain KM389_16995 PF00132 Bacterial transferase hexapeptide (six repeats) KM389_17000 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM389_17005 PF00535 Glycosyl transferase family 2 KM389_17010 PF00378 Enoyl-CoA hydratase/isomerase KM389_17015 PF08453 Peptidase family M9 N-terminal KM389_17015 PF18496 Collagenase G catalytic helper subdomain KM389_17015 PF01752 Collagenase KM389_17020 PF02308 MgtC family KM389_17035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM389_17040 PF04294 VanW like protein KM389_17050 PF13039 Protein of unknown function (DUF3900) KM389_17050 PF13037 Domain of unknown function (DUF3898) KM389_17070 PF00313 'Cold-shock' DNA-binding domain KM389_17080 PF00258 Flavodoxin KM389_17090 PF00293 NUDIX domain KM389_17100 PF00132 Bacterial transferase hexapeptide (six repeats) KM389_17110 PF00106 short chain dehydrogenase KM389_17120 PF00206 Lyase KM389_17120 PF14698 Argininosuccinate lyase C-terminal KM389_17130 PF01156 Inosine-uridine preferring nucleoside hydrolase KM389_17135 PF00474 Sodium:solute symporter family KM389_17145 PF00171 Aldehyde dehydrogenase family KM389_17155 PF14151 YfhD-like protein KM389_17160 PF13243 Squalene-hopene cyclase C-terminal domain KM389_17160 PF13249 Squalene-hopene cyclase N-terminal domain KM389_17165 PF02681 Divergent PAP2 family KM389_17170 PF00892 EamA-like transporter family KM389_17175 PF06961 Protein of unknown function (DUF1294) KM389_17190 PF10609 NUBPL iron-transfer P-loop NTPase KM389_17200 PF02391 MoaE protein KM389_17205 PF00994 Probable molybdopterin binding domain KM389_17205 PF03454 MoeA C-terminal region (domain IV) KM389_17205 PF03453 MoeA N-terminal region (domain I and II) KM389_17210 PF00899 ThiF family KM389_17215 PF01226 Formate/nitrite transporter KM389_17220 PF06463 Molybdenum Cofactor Synthesis C KM389_17220 PF04055 Radical SAM superfamily KM389_17225 PF02634 FdhD/NarQ family KM389_17230 PF10057 Uncharacterized conserved protein (DUF2294) KM389_17235 PF07849 Protein of unknown function (DUF1641) KM389_17240 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM389_17240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM389_17240 PF00037 4Fe-4S binding domain KM389_17240 PF01568 Molydopterin dinucleotide binding domain KM389_17240 PF00384 Molybdopterin oxidoreductase KM389_17245 PF03323 Bacillus/Clostridium GerA spore germination protein KM389_17285 PF08241 Methyltransferase domain KM389_17290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_17295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_17300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_17305 PF00375 Sodium:dicarboxylate symporter family KM389_17310 PF03816 Cell envelope-related transcriptional attenuator domain KM389_17320 PF08281 Sigma-70, region 4 KM389_17320 PF04542 Sigma-70 region 2 KM389_17340 PF00005 ABC transporter KM389_17340 PF13732 Domain of unknown function (DUF4162) KM389_17350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM389_17350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM389_17355 PF00521 DNA gyrase/topoisomerase IV, subunit A KM389_17355 PF03989 DNA gyrase C-terminal domain, beta-propeller KM389_17360 PF00204 DNA gyrase B KM389_17360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_17360 PF00986 DNA gyrase B subunit, carboxyl terminus KM389_17360 PF01751 Toprim domain KM389_17365 PF13380 CoA binding domain KM389_17370 PF13180 PDZ domain KM389_17375 PF00486 Transcriptional regulatory protein, C terminal KM389_17375 PF00072 Response regulator receiver domain KM389_17385 PF03477 ATP cone domain KM389_17385 PF13597 Anaerobic ribonucleoside-triphosphate reductase KM389_17390 PF02660 Glycerol-3-phosphate acyltransferase KM389_17395 PF01521 Iron-sulphur cluster biosynthesis KM389_17400 PF03061 Thioesterase superfamily KM389_17405 PF00704 Glycosyl hydrolases family 18 KM389_17405 PF01476 LysM domain KM389_17415 PF08177 Small acid-soluble spore protein N family KM389_17420 PF13040 Fur-regulated basic protein B KM389_17425 PF01336 OB-fold nucleic acid binding domain KM389_17425 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM389_17425 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM389_17425 PF14579 Helix-hairpin-helix motif KM389_17425 PF02811 PHP domain KM389_17425 PF00929 Exonuclease KM389_17425 PF11490 DNA polymerase III polC-type N-terminus II KM389_17430 PF00578 AhpC/TSA family KM389_17440 PF03412 Peptidase C39 family KM389_17440 PF00005 ABC transporter KM389_17440 PF00664 ABC transporter transmembrane region KM389_17445 PF00694 Aconitase C-terminal domain KM389_17445 PF00330 Aconitase family (aconitate hydratase) KM389_17455 PF01522 Polysaccharide deacetylase KM389_17485 PF02272 DHHA1 domain KM389_17485 PF01411 tRNA synthetases class II (A) KM389_17485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM389_17490 PF00293 NUDIX domain KM389_17490 PF13344 Haloacid dehalogenase-like hydrolase KM389_17500 PF00108 Thiolase, N-terminal domain KM389_17500 PF02803 Thiolase, C-terminal domain KM389_17505 PF13193 AMP-binding enzyme C-terminal domain KM389_17505 PF00501 AMP-binding enzyme KM389_17510 PF02632 BioY family KM389_17515 PF13193 AMP-binding enzyme C-terminal domain KM389_17515 PF00501 AMP-binding enzyme KM389_17535 PF05532 CsbD-like KM389_17565 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM389_17565 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM389_17575 PF00989 PAS fold KM389_17575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_17575 PF00512 His Kinase A (phospho-acceptor) domain KM389_17575 PF13426 PAS domain KM389_17575 PF13188 PAS domain KM389_17580 PF01738 Dienelactone hydrolase family KM389_17585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM389_17590 PF00474 Sodium:solute symporter family KM389_17595 PF01645 Conserved region in glutamate synthase KM389_17600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM389_17605 PF02559 CarD-like/TRCF domain KM389_17610 PF00491 Arginase family KM389_17615 PF01979 Amidohydrolase family KM389_17620 PF17392 Urocanase C-terminal domain KM389_17620 PF01175 Urocanase Rossmann-like domain KM389_17620 PF17391 Urocanase N-terminal domain KM389_17625 PF00221 Aromatic amino acid lyase KM389_17630 PF09021 HutP KM389_17635 PF01209 ubiE/COQ5 methyltransferase family KM389_17655 PF11084 Protein of unknown function (DUF2621) KM389_17690 PF07301 Protein of unknown function (DUF1453) KM389_17695 PF02683 Cytochrome C biogenesis protein transmembrane region KM389_17705 PF03466 LysR substrate binding domain KM389_17705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM389_17710 PF03788 LrgA family KM389_17715 PF04172 LrgB-like family KM389_17720 PF13344 Haloacid dehalogenase-like hydrolase KM389_17720 PF00293 NUDIX domain KM389_17740 PF01471 Putative peptidoglycan binding domain KM389_17740 PF01510 N-acetylmuramoyl-L-alanine amidase KM389_17755 PF00005 ABC transporter KM389_17755 PF00664 ABC transporter transmembrane region KM389_17760 PF00664 ABC transporter transmembrane region KM389_17760 PF00005 ABC transporter KM389_17765 PF03672 Uncharacterised protein family (UPF0154) KM389_17770 PF10747 Sporulation inhibitor of replication protein SirA KM389_17775 PF00456 Transketolase, thiamine diphosphate binding domain KM389_17775 PF02780 Transketolase, C-terminal domain KM389_17775 PF02779 Transketolase, pyrimidine binding domain KM389_17780 PF07282 Putative transposase DNA-binding domain KM389_17780 PF12323 Helix-turn-helix domain KM389_17780 PF01385 Probable transposase KM389_17785 PF00528 Binding-protein-dependent transport system inner membrane component KM389_17790 PF00528 Binding-protein-dependent transport system inner membrane component KM389_17795 PF00005 ABC transporter KM389_17810 PF05979 Bacterial protein of unknown function (DUF896) KM389_17815 PF00239 Resolvase, N terminal domain KM389_17820 PF01726 LexA DNA binding domain KM389_17820 PF00717 Peptidase S24-like KM389_17835 PF03551 Transcriptional regulator PadR-like family KM389_17870 PF01510 N-acetylmuramoyl-L-alanine amidase KM389_17870 PF01476 LysM domain KM389_17870 PF01471 Putative peptidoglycan binding domain KM389_17875 PF05105 Bacteriophage holin family KM389_18030 PF08281 Sigma-70, region 4 KM389_18075 PF02511 Thymidylate synthase complementing protein KM389_18080 PF00145 C-5 cytosine-specific DNA methylase KM389_18155 PF01381 Helix-turn-helix KM389_18175 PF00589 Phage integrase family KM389_18175 PF02899 Phage integrase, N-terminal SAM-like domain KM389_18180 PF03951 Glutamine synthetase, beta-Grasp domain KM389_18180 PF00120 Glutamine synthetase, catalytic domain KM389_18185 PF13411 MerR HTH family regulatory protein KM389_18190 PF06838 Methionine gamma-lyase KM389_18200 PF03458 UPF0126 domain KM389_18210 PF00004 ATPase family associated with various cellular activities (AAA) KM389_18210 PF17866 AAA lid domain KM389_18225 PF17209 Hfq protein KM389_18240 PF06725 3D domain KM389_18240 PF01476 LysM domain KM389_18245 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM389_18245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM389_18250 PF00294 pfkB family carbohydrate kinase KM389_18255 PF00455 DeoR C terminal sensor domain KM389_18255 PF08220 DeoR-like helix-turn-helix domain KM389_18265 PF04238 Protein of unknown function (DUF420) KM389_18275 PF00324 Amino acid permease KM389_18280 PF00041 Fibronectin type III domain KM389_18280 PF00704 Glycosyl hydrolases family 18 KM389_18290 PF00149 Calcineurin-like phosphoesterase KM389_18290 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM389_18295 PF01226 Formate/nitrite transporter KM389_18300 PF00216 Bacterial DNA-binding protein KM389_18305 PF00403 Heavy-metal-associated domain KM389_18310 PF00403 Heavy-metal-associated domain KM389_18315 PF02583 Metal-sensitive transcriptional repressor KM389_18325 PF00756 Putative esterase KM389_18330 PF00005 ABC transporter KM389_18335 PF01032 FecCD transport family KM389_18340 PF01032 FecCD transport family KM389_18350 PF03372 Endonuclease/Exonuclease/phosphatase family KM389_18355 PF02805 Metal binding domain of Ada KM389_18355 PF12833 Helix-turn-helix domain KM389_18360 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM389_18360 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM389_18365 PF00730 HhH-GPD superfamily base excision DNA repair protein KM389_18365 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain KM389_18370 PF07687 Peptidase dimerisation domain KM389_18370 PF01546 Peptidase family M20/M25/M40 KM389_18390 PF00561 alpha/beta hydrolase fold KM389_18395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM389_18400 PF00990 Diguanylate cyclase, GGDEF domain KM389_18400 PF00563 EAL domain KM389_18400 PF03707 Bacterial signalling protein N terminal repeat KM389_18410 PF10787 Uncharacterised protein from bacillus cereus group KM389_18415 PF04172 LrgB-like family KM389_18420 PF03788 LrgA family KM389_18425 PF00392 Bacterial regulatory proteins, gntR family KM389_18425 PF00155 Aminotransferase class I and II KM389_18430 PF00561 alpha/beta hydrolase fold KM389_18430 PF00364 Biotin-requiring enzyme KM389_18435 PF02585 GlcNAc-PI de-N-acetylase KM389_18450 PF00388 Phosphatidylinositol-specific phospholipase C, X domain KM389_18455 PF00082 Subtilase family KM389_18460 PF07486 Cell Wall Hydrolase KM389_18465 PF03275 UDP-galactopyranose mutase KM389_18470 PF00884 Sulfatase KM389_18475 PF00350 Dynamin family KM389_18485 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KM389_18490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_18490 PF00512 His Kinase A (phospho-acceptor) domain KM389_18495 PF00072 Response regulator receiver domain KM389_18495 PF00486 Transcriptional regulatory protein, C terminal KM389_18510 PF00005 ABC transporter KM389_18515 PF01119 DNA mismatch repair protein, C-terminal domain KM389_18515 PF08676 MutL C terminal dimerisation domain KM389_18520 PF05188 MutS domain II KM389_18520 PF00488 MutS domain V KM389_18520 PF05190 MutS family domain IV KM389_18520 PF05192 MutS domain III KM389_18520 PF01624 MutS domain I KM389_18525 PF10628 Outer spore coat protein E (CotE) KM389_18530 PF06133 Control of competence regulator ComK, YlbF/YmcA KM389_18535 PF04055 Radical SAM superfamily KM389_18535 PF01938 TRAM domain KM389_18535 PF00919 Uncharacterized protein family UPF0004 KM389_18540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM389_18545 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KM389_18545 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KM389_18545 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KM389_18550 PF01244 Membrane dipeptidase (Peptidase family M19) KM389_18555 PF04232 Stage V sporulation protein S (SpoVS) KM389_18560 PF13277 YmdB-like protein KM389_18565 PF12072 Domain of unknown function (DUF3552) KM389_18565 PF00013 KH domain KM389_18565 PF01966 HD domain KM389_18570 PF00154 recA bacterial DNA recombination protein KM389_18580 PF02464 Competence-damaged protein KM389_18580 PF18146 Damage-inducible protein CinA KH domain KM389_18580 PF00994 Probable molybdopterin binding domain KM389_18585 PF01066 CDP-alcohol phosphatidyltransferase KM389_18590 PF13464 Domain of unknown function (DUF4115) KM389_18595 PF11868 Protein of unknown function (DUF3388) KM389_18600 PF11588 Protein of unknown function (DUF3243) KM389_18610 PF05193 Peptidase M16 inactive domain KM389_18610 PF00675 Insulinase (Peptidase family M16) KM389_18615 PF05193 Peptidase M16 inactive domain KM389_18620 PF02653 Branched-chain amino acid transport system / permease component KM389_18630 PF00005 ABC transporter KM389_18635 PF02608 ABC transporter substrate-binding protein PnrA-like KM389_18640 PF07702 UTRA domain KM389_18640 PF00392 Bacterial regulatory proteins, gntR family KM389_18645 PF09397 Ftsk gamma domain KM389_18645 PF17854 FtsK alpha domain KM389_18645 PF01580 FtsK/SpoIIIE family KM389_18650 PF14035 YlzJ-like protein KM389_18655 PF00574 Clp protease KM389_18660 PF00753 Metallo-beta-lactamase superfamily KM389_18660 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM389_18660 PF17770 Ribonuclease J C-terminal domain KM389_18665 PF00701 Dihydrodipicolinate synthetase family KM389_18670 PF13840 ACT domain KM389_18670 PF00696 Amino acid kinase family KM389_18675 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM389_18675 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM389_18680 PF02441 Flavoprotein KM389_18685 PF16924 Dipicolinate synthase subunit A N-terminal domain KM389_18685 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM389_18690 PF05239 PRC-barrel domain KM389_18695 PF00675 Insulinase (Peptidase family M16) KM389_18695 PF05193 Peptidase M16 inactive domain KM389_18700 PF01522 Polysaccharide deacetylase KM389_18705 PF03725 3' exoribonuclease family, domain 2 KM389_18705 PF00013 KH domain KM389_18705 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KM389_18705 PF01138 3' exoribonuclease family, domain 1 KM389_18705 PF00575 S1 RNA binding domain KM389_18710 PF00312 Ribosomal protein S15 KM389_18715 PF06574 FAD synthetase KM389_18715 PF01687 Riboflavin kinase KM389_18720 PF01509 TruB family pseudouridylate synthase (N terminal domain) KM389_18720 PF16198 tRNA pseudouridylate synthase B C-terminal domain KM389_18725 PF02033 Ribosome-binding factor A KM389_18730 PF04456 Protein of unknown function (DUF503) KM389_18735 PF11987 Translation-initiation factor 2 KM389_18735 PF04760 Translation initiation factor IF-2, N-terminal region KM389_18735 PF00009 Elongation factor Tu GTP binding domain KM389_18740 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM389_18745 PF04296 Protein of unknown function (DUF448) KM389_18750 PF13184 NusA-like KH domain KM389_18750 PF08529 NusA N-terminal domain KM389_18750 PF00575 S1 RNA binding domain KM389_18755 PF02576 RimP N-terminal domain KM389_18755 PF17384 RimP C-terminal SH3 domain KM389_18760 PF02811 PHP domain KM389_18760 PF14579 Helix-hairpin-helix motif KM389_18760 PF11490 DNA polymerase III polC-type N-terminus II KM389_18760 PF14480 DNA polymerase III polC-type N-terminus I KM389_18760 PF00929 Exonuclease KM389_18760 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM389_18760 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM389_18765 PF04073 Aminoacyl-tRNA editing domain KM389_18765 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM389_18765 PF03129 Anticodon binding domain KM389_18770 PF17820 PDZ domain KM389_18770 PF02163 Peptidase family M50 KM389_18775 PF13288 DXP reductoisomerase C-terminal domain KM389_18775 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM389_18775 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM389_18785 PF01255 Putative undecaprenyl diphosphate synthase KM389_18790 PF01765 Ribosome recycling factor KM389_18795 PF00696 Amino acid kinase family KM389_18800 PF00889 Elongation factor TS KM389_18805 PF00318 Ribosomal protein S2 KM389_18810 PF06018 CodY GAF-like domain KM389_18810 PF08222 CodY helix-turn-helix domain KM389_18815 PF00004 ATPase family associated with various cellular activities (AAA) KM389_18815 PF10431 C-terminal, D2-small domain, of ClpB protein KM389_18815 PF07724 AAA domain (Cdc48 subfamily) KM389_18820 PF00227 Proteasome subunit KM389_18825 PF00589 Phage integrase family KM389_18825 PF02899 Phage integrase, N-terminal SAM-like domain KM389_18830 PF01134 Glucose inhibited division protein A KM389_18835 PF01396 Topoisomerase DNA binding C4 zinc finger KM389_18835 PF01751 Toprim domain KM389_18835 PF01131 DNA topoisomerase KM389_18845 PF02629 CoA binding domain KM389_18845 PF00549 CoA-ligase KM389_18850 PF08442 ATP-grasp domain KM389_18850 PF00549 CoA-ligase KM389_18855 PF01351 Ribonuclease HII KM389_18860 PF01926 50S ribosome-binding GTPase KM389_18865 PF10502 Signal peptidase, peptidase S26 KM389_18870 PF01245 Ribosomal protein L19 KM389_18875 PF01746 tRNA (Guanine-1)-methyltransferase KM389_18880 PF05239 PRC-barrel domain KM389_18880 PF01782 RimM N-terminal domain KM389_18890 PF00886 Ribosomal protein S16 KM389_18895 PF02978 Signal peptide binding domain KM389_18895 PF02881 SRP54-type protein, helical bundle domain KM389_18895 PF00448 SRP54-type protein, GTPase domain KM389_18900 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KM389_18905 PF00448 SRP54-type protein, GTPase domain KM389_18905 PF02881 SRP54-type protein, helical bundle domain KM389_18910 PF02463 RecF/RecN/SMC N terminal domain KM389_18910 PF06470 SMC proteins Flexible Hinge Domain KM389_18915 PF14622 Ribonuclease-III-like KM389_18915 PF00035 Double-stranded RNA binding motif KM389_18920 PF00550 Phosphopantetheine attachment site KM389_18930 PF00698 Acyl transferase domain KM389_18935 PF02504 Fatty acid synthesis protein KM389_18940 PF03061 Thioesterase superfamily KM389_18945 PF17191 RecG wedge domain KM389_18945 PF00271 Helicase conserved C-terminal domain KM389_18945 PF00270 DEAD/DEAH box helicase KM389_18950 PF13684 Dihydroxyacetone kinase family KM389_18950 PF02734 DAK2 domain KM389_18955 PF03780 Asp23 family, cell envelope-related function KM389_18960 PF00830 Ribosomal L28 family KM389_18965 PF08183 Stage V sporulation protein family KM389_18970 PF04263 Thiamin pyrophosphokinase, catalytic domain KM389_18970 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KM389_18975 PF00834 Ribulose-phosphate 3 epimerase family KM389_18980 PF16745 RsgA N-terminal domain KM389_18980 PF03193 RsgA GTPase KM389_18985 PF00069 Protein kinase domain KM389_18985 PF03793 PASTA domain KM389_18995 PF04055 Radical SAM superfamily KM389_19000 PF01029 NusB family KM389_19000 PF01189 16S rRNA methyltransferase RsmB/F KM389_19005 PF00551 Formyl transferase KM389_19005 PF02911 Formyl transferase, C-terminal domain KM389_19010 PF01327 Polypeptide deformylase KM389_19015 PF00271 Helicase conserved C-terminal domain KM389_19015 PF17764 3′ DNA-binding domain (3′BD) KM389_19015 PF18074 Primosomal protein N C-terminal domain KM389_19015 PF04851 Type III restriction enzyme, res subunit KM389_19015 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KM389_19020 PF04127 DNA / pantothenate metabolism flavoprotein KM389_19020 PF02441 Flavoprotein KM389_19025 PF01192 RNA polymerase Rpb6 KM389_19030 PF00625 Guanylate kinase KM389_19035 PF04025 Domain of unknown function (DUF370) KM389_19040 PF08340 Domain of unknown function (DUF1732) KM389_19040 PF03755 YicC-like family, N-terminal region KM389_19045 PF00690 Cation transporter/ATPase, N-terminus KM389_19045 PF00689 Cation transporting ATPase, C-terminus KM389_19050 PF05670 NFACT protein RNA binding domain KM389_19055 PF00557 Metallopeptidase family M24 KM389_19055 PF01321 Creatinase/Prolidase N-terminal domain KM389_19085 PF00156 Phosphoribosyl transferase domain KM389_19090 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KM389_19095 PF01180 Dihydroorotate dehydrogenase KM389_19100 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KM389_19100 PF00175 Oxidoreductase NAD-binding domain KM389_19105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM389_19105 PF02142 MGS-like domain KM389_19105 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KM389_19110 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KM389_19110 PF00117 Glutamine amidotransferase class-I KM389_19115 PF01979 Amidohydrolase family KM389_19120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM389_19120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM389_19125 PF00860 Permease family KM389_19130 PF00156 Phosphoribosyl transferase domain KM389_19135 PF01479 S4 domain KM389_19135 PF00849 RNA pseudouridylate synthase KM389_19140 PF01252 Signal peptidase (SPase) II KM389_19150 PF00133 tRNA synthetases class I (I, L, M and V) KM389_19150 PF06827 Zinc finger found in FPG and IleRS KM389_19150 PF08264 Anticodon-binding domain of tRNA KM389_19155 PF05103 DivIVA protein KM389_19160 PF01479 S4 domain KM389_19160 PF17774 Putative RNA-binding domain in YlmH KM389_19165 PF02325 YGGT family KM389_19170 PF04472 Cell division protein SepF KM389_19175 PF01168 Alanine racemase, N-terminal domain KM389_19180 PF02578 Multi-copper polyphenol oxidoreductase laccase KM389_19185 PF05239 PRC-barrel domain KM389_19190 PF04542 Sigma-70 region 2 KM389_19190 PF04545 Sigma-70, region 4 KM389_19190 PF04539 Sigma-70 region 3 KM389_19195 PF04545 Sigma-70, region 4 KM389_19195 PF04542 Sigma-70 region 2 KM389_19200 PF03419 Sporulation factor SpoIIGA KM389_19205 PF00091 Tubulin/FtsZ family, GTPase domain KM389_19205 PF12327 FtsZ family, C-terminal domain KM389_19210 PF02491 SHS2 domain inserted in FTSA KM389_19215 PF03799 Cell division protein FtsQ KM389_19215 PF08478 POTRA domain, FtsQ-type KM389_19220 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM389_19220 PF01565 FAD binding domain KM389_19225 PF04101 Glycosyltransferase family 28 C-terminal domain KM389_19225 PF03033 Glycosyltransferase family 28 N-terminal domain KM389_19230 PF01098 Cell cycle protein KM389_19235 PF02875 Mur ligase family, glutamate ligase domain KM389_19235 PF08245 Mur ligase middle domain KM389_19240 PF00953 Glycosyl transferase family 4 KM389_19240 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KM389_19245 PF01225 Mur ligase family, catalytic domain KM389_19245 PF08245 Mur ligase middle domain KM389_19245 PF02875 Mur ligase family, glutamate ligase domain KM389_19250 PF03717 Penicillin-binding Protein dimerisation domain KM389_19250 PF00905 Penicillin binding protein transpeptidase domain KM389_19250 PF03793 PASTA domain KM389_19255 PF03793 PASTA domain KM389_19255 PF03717 Penicillin-binding Protein dimerisation domain KM389_19255 PF00905 Penicillin binding protein transpeptidase domain KM389_19260 PF04977 Septum formation initiator KM389_19265 PF01795 MraW methylase family KM389_19270 PF10079 Bacillithiol biosynthesis BshC KM389_19275 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM389_19275 PF02558 Ketopantoate reductase PanE/ApbA KM389_19280 PF00583 Acetyltransferase (GNAT) family KM389_19290 PF01783 Ribosomal L32p protein family KM389_19295 PF02620 Large ribosomal RNA subunit accumulation protein YceD KM389_19340 PF12123 N-acetylmuramoyl-l-alanine amidase KM389_19340 PF01510 N-acetylmuramoyl-L-alanine amidase KM389_19345 PF05105 Bacteriophage holin family KM389_19420 PF00574 Clp protease KM389_19430 PF03354 Phage Terminase KM389_19450 PF10137 Predicted nucleotide-binding protein containing TIR-like domain KM389_19455 PF00589 Phage integrase family KM389_19505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM389_19520 PF00692 dUTPase KM389_19535 PF04542 Sigma-70 region 2 KM389_19535 PF04539 Sigma-70 region 3 KM389_19535 PF04545 Sigma-70, region 4 KM389_19560 PF07319 Primosomal protein DnaI N-terminus KM389_19560 PF01695 IstB-like ATP binding protein KM389_19590 PF01381 Helix-turn-helix KM389_19605 PF01381 Helix-turn-helix KM389_19620 PF14659 Phage integrase, N-terminal SAM-like domain KM389_19620 PF00589 Phage integrase family KM389_19625 PF05636 HIGH Nucleotidyl Transferase KM389_19630 PF05362 Lon protease (S16) C-terminal proteolytic domain KM389_19630 PF13180 PDZ domain KM389_19635 PF01734 Patatin-like phospholipase KM389_19640 PF07670 Nucleoside recognition KM389_19645 PF01467 Cytidylyltransferase-like KM389_19660 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KM389_19665 PF06133 Control of competence regulator ComK, YlbF/YmcA KM389_19670 PF00300 Histidine phosphatase superfamily (branch 1) KM389_19675 PF14003 YlbE-like protein KM389_19680 PF14071 Putative coat protein KM389_19685 PF00188 Cysteine-rich secretory protein family KM389_19685 PF14504 CAP-associated N-terminal KM389_19690 PF08868 YugN-like family KM389_19695 PF00795 Carbon-nitrogen hydrolase KM389_19700 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KM389_19705 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KM389_19710 PF00510 Cytochrome c oxidase subunit III KM389_19715 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM389_19720 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KM389_19720 PF00034 Cytochrome c KM389_19720 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM389_19725 PF01040 UbiA prenyltransferase family KM389_19730 PF02628 Cytochrome oxidase assembly protein KM389_19735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM389_19735 PF02785 Biotin carboxylase C-terminal domain KM389_19735 PF00289 Biotin carboxylase, N-terminal domain KM389_19735 PF00364 Biotin-requiring enzyme KM389_19735 PF00682 HMGL-like KM389_19735 PF02436 Conserved carboxylase domain KM389_19740 PF01098 Cell cycle protein KM389_19745 PF07408 Protein of unknown function (DUF1507) KM389_19755 PF13638 PIN domain KM389_19755 PF02562 PhoH-like protein KM389_19765 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KM389_19775 PF14036 YlaH-like protein KM389_19780 PF14492 Elongation Factor G, domain II KM389_19780 PF03144 Elongation factor Tu domain 2 KM389_19780 PF00009 Elongation factor Tu GTP binding domain KM389_19780 PF00679 Elongation factor G C-terminus KM389_19790 PF00459 Inositol monophosphatase family KM389_19800 PF06335 Protein of unknown function (DUF1054) KM389_19805 PF05256 Uncharacterised protein family (UPF0223) KM389_19810 PF01276 Orn/Lys/Arg decarboxylase, major domain KM389_19810 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM389_19850 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_19850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM389_19855 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM389_19855 PF00364 Biotin-requiring enzyme KM389_19855 PF02817 e3 binding domain KM389_19860 PF02779 Transketolase, pyrimidine binding domain KM389_19860 PF02780 Transketolase, C-terminal domain KM389_19865 PF00676 Dehydrogenase E1 component KM389_19875 PF01327 Polypeptide deformylase KM389_19885 PF07288 Protein of unknown function (DUF1447) KM389_19890 PF00753 Metallo-beta-lactamase superfamily KM389_19890 PF17770 Ribonuclease J C-terminal domain KM389_19890 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM389_19895 PF02080 TrkA-C domain KM389_19895 PF02254 TrkA-N domain KM389_19905 PF01546 Peptidase family M20/M25/M40 KM389_19905 PF07687 Peptidase dimerisation domain KM389_19910 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KM389_19910 PF00132 Bacterial transferase hexapeptide (six repeats) KM389_19910 PF14602 Hexapeptide repeat of succinyl-transferase KM389_19915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM389_19915 PF03466 LysR substrate binding domain KM389_19930 PF04308 Ribonuclease H-like KM389_19940 PF08796 Protein of unknown function (DUF1797) KM389_19955 PF10388 EAL-domain associated signalling protein domain KM389_19955 PF00563 EAL domain KM389_19965 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM389_19965 PF00149 Calcineurin-like phosphoesterase KM389_19975 PF02503 Polyphosphate kinase middle domain KM389_19975 PF13090 Polyphosphate kinase C-terminal domain 2 KM389_19975 PF17941 Polyphosphate kinase C-terminal domain 1 KM389_19975 PF13089 Polyphosphate kinase N-terminal domain KM389_19980 PF02541 Ppx/GppA phosphatase family KM389_19985 PF14177 YkyB-like protein KM389_20010 PF07690 Major Facilitator Superfamily KM389_20020 PF08267 Cobalamin-independent synthase, N-terminal domain KM389_20020 PF01717 Cobalamin-independent synthase, Catalytic domain KM389_20030 PF14040 Deoxyribonuclease NucA/NucB KM389_20040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_20040 PF00512 His Kinase A (phospho-acceptor) domain KM389_20050 PF00155 Aminotransferase class I and II KM389_20060 PF00528 Binding-protein-dependent transport system inner membrane component KM389_20065 PF00528 Binding-protein-dependent transport system inner membrane component KM389_20070 PF13416 Bacterial extracellular solute-binding protein KM389_20075 PF00128 Alpha amylase, catalytic domain KM389_20075 PF02903 Alpha amylase, N-terminal ig-like domain KM389_20075 PF16657 Maltogenic Amylase, C-terminal domain KM389_20080 PF00128 Alpha amylase, catalytic domain KM389_20080 PF16657 Maltogenic Amylase, C-terminal domain KM389_20085 PF03459 TOBE domain KM389_20085 PF00005 ABC transporter KM389_20085 PF17912 MalK OB fold domain KM389_20130 PF00293 NUDIX domain KM389_20160 PF03551 Transcriptional regulator PadR-like family KM389_20175 PF01008 Initiation factor 2 subunit family KM389_20180 PF01636 Phosphotransferase enzyme family KM389_20185 PF00795 Carbon-nitrogen hydrolase KM389_20190 PF00155 Aminotransferase class I and II KM389_20195 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KM389_20195 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KM389_20205 PF00596 Class II Aldolase and Adducin N-terminal domain KM389_20210 PF03079 ARD/ARD' family KM389_20230 PF00990 Diguanylate cyclase, GGDEF domain KM389_20230 PF08448 PAS fold KM389_20235 PF00881 Nitroreductase family KM389_20250 PF05524 PEP-utilising enzyme, N-terminal KM389_20250 PF00391 PEP-utilising enzyme, mobile domain KM389_20250 PF02896 PEP-utilising enzyme, TIM barrel domain KM389_20255 PF00381 PTS HPr component phosphorylation site KM389_20260 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM389_20260 PF00367 phosphotransferase system, EIIB KM389_20260 PF02378 Phosphotransferase system, EIIC KM389_20265 PF03123 CAT RNA binding domain KM389_20265 PF00874 PRD domain KM389_20275 PF00392 Bacterial regulatory proteins, gntR family KM389_20275 PF07702 UTRA domain KM389_20280 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KM389_20285 PF01979 Amidohydrolase family KM389_20295 PF04079 Segregation and condensation complex subunit ScpB KM389_20300 PF02616 Segregation and condensation protein ScpA KM389_20310 PF03745 Domain of unknown function (DUF309) KM389_20315 PF00583 Acetyltransferase (GNAT) family KM389_20320 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KM389_20325 PF06207 Protein of unknown function (DUF1002) KM389_20335 PF03323 Bacillus/Clostridium GerA spore germination protein KM389_20340 PF14097 Stage V sporulation protein AE1 KM389_20345 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM389_20350 PF07451 Stage V sporulation protein AD (SpoVAD) KM389_20355 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM389_20360 PF13782 Stage V sporulation protein AB KM389_20365 PF12164 Stage V sporulation protein AA KM389_20375 PF00209 Sodium:neurotransmitter symporter family KM389_20380 PF04545 Sigma-70, region 4 KM389_20380 PF04542 Sigma-70 region 2 KM389_20380 PF04539 Sigma-70 region 3 KM389_20385 PF13581 Histidine kinase-like ATPase domain KM389_20390 PF01740 STAS domain KM389_20395 PF00768 D-alanyl-D-alanine carboxypeptidase KM389_20395 PF07943 Penicillin-binding protein 5, C-terminal domain KM389_20400 PF00392 Bacterial regulatory proteins, gntR family KM389_20405 PF00005 ABC transporter KM389_20420 PF01047 MarR family KM389_20430 PF00860 Permease family KM389_20435 PF01544 CorA-like Mg2+ transporter protein KM389_20440 PF02885 Glycosyl transferase family, helical bundle domain KM389_20440 PF00591 Glycosyl transferase family, a/b domain KM389_20440 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM389_20445 PF01048 Phosphorylase superfamily KM389_20450 PF01676 Metalloenzyme superfamily KM389_20460 PF02899 Phage integrase, N-terminal SAM-like domain KM389_20460 PF00589 Phage integrase family KM389_20465 PF14004 Protein of unknown function (DUF4227) KM389_20470 PF01475 Ferric uptake regulator family KM389_20475 PF01944 Stage II sporulation protein M KM389_20485 PF00293 NUDIX domain KM389_20490 PF13072 Mother cell inhibitor of FtsZ KM389_20495 PF00248 Aldo/keto reductase family KM389_20500 PF00248 Aldo/keto reductase family KM389_20505 PF13673 Acetyltransferase (GNAT) domain KM389_20505 PF04229 GrpB protein KM389_20515 PF00746 LPXTG cell wall anchor motif KM389_20515 PF00149 Calcineurin-like phosphoesterase KM389_20515 PF00565 Staphylococcal nuclease homologue KM389_20515 PF02872 5'-nucleotidase, C-terminal domain KM389_20525 PF12146 Serine aminopeptidase, S33 KM389_20530 PF13726 Na+-H+ antiporter family KM389_20530 PF03553 Na+/H+ antiporter family KM389_20535 PF00356 Bacterial regulatory proteins, lacI family KM389_20540 PF00583 Acetyltransferase (GNAT) family KM389_20545 PF12146 Serine aminopeptidase, S33 KM389_20550 PF10827 Protein of unknown function (DUF2552) KM389_20560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM389_20560 PF01872 RibD C-terminal domain KM389_20565 PF00677 Lumazine binding domain KM389_20570 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KM389_20570 PF00925 GTP cyclohydrolase II KM389_20575 PF00885 6,7-dimethyl-8-ribityllumazine synthase KM389_20585 PF06968 Biotin and Thiamin Synthesis associated domain KM389_20585 PF04055 Radical SAM superfamily KM389_20590 PF13847 Methyltransferase domain KM389_20595 PF12697 Alpha/beta hydrolase family KM389_20595 PF08241 Methyltransferase domain KM389_20600 PF00155 Aminotransferase class I and II KM389_20610 PF00202 Aminotransferase class-III KM389_20620 PF03553 Na+/H+ antiporter family KM389_20625 PF00149 Calcineurin-like phosphoesterase KM389_20625 PF02872 5'-nucleotidase, C-terminal domain KM389_20635 PF01037 Lrp/AsnC ligand binding domain KM389_20635 PF13404 AsnC-type helix-turn-helix domain KM389_20650 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM389_20650 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM389_20655 PF00202 Aminotransferase class-III KM389_20660 PF00696 Amino acid kinase family KM389_20665 PF01960 ArgJ family KM389_20670 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM389_20670 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM389_20680 PF00106 short chain dehydrogenase KM389_20690 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM389_20690 PF03807 NADP oxidoreductase coenzyme F420-dependent KM389_20695 PF03313 Serine dehydratase alpha chain KM389_20700 PF01842 ACT domain KM389_20700 PF03315 Serine dehydratase beta chain KM389_20710 PF12706 Beta-lactamase superfamily domain KM389_20710 PF00753 Metallo-beta-lactamase superfamily KM389_20720 PF11799 impB/mucB/samB family C-terminal domain KM389_20720 PF11798 IMS family HHH motif KM389_20720 PF00817 impB/mucB/samB family KM389_20730 PF07687 Peptidase dimerisation domain KM389_20730 PF01546 Peptidase family M20/M25/M40 KM389_20735 PF13302 Acetyltransferase (GNAT) domain KM389_20750 PF03734 L,D-transpeptidase catalytic domain KM389_20755 PF06081 Aromatic acid exporter family member 1 KM389_20755 PF11728 Putative aromatic acid exporter C-terminal domain KM389_20760 PF00005 ABC transporter KM389_20765 PF00528 Binding-protein-dependent transport system inner membrane component KM389_20770 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM389_20775 PF06491 Disulphide isomerase KM389_20780 PF11208 Protein of unknown function (DUF2992) KM389_20790 PF01098 Cell cycle protein KM389_20795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM389_20795 PF02817 e3 binding domain KM389_20795 PF00364 Biotin-requiring enzyme KM389_20800 PF02779 Transketolase, pyrimidine binding domain KM389_20800 PF02780 Transketolase, C-terminal domain KM389_20805 PF00676 Dehydrogenase E1 component KM389_20810 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_20810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM389_20815 PF00871 Acetokinase family KM389_20820 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM389_20820 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM389_20825 PF01515 Phosphate acetyl/butaryl transferase KM389_20830 PF02954 Bacterial regulatory protein, Fis family KM389_20830 PF00989 PAS fold KM389_20830 PF00158 Sigma-54 interaction domain KM389_20840 PF03009 Glycerophosphoryl diester phosphodiesterase family KM389_20845 PF14174 YycC-like protein KM389_20855 PF00072 Response regulator receiver domain KM389_20855 PF08769 Sporulation initiation factor Spo0A C terminal KM389_20860 PF05580 SpoIVB peptidase S55 KM389_20860 PF17820 PDZ domain KM389_20865 PF13476 AAA domain KM389_20870 PF02863 Arginine repressor, C-terminal domain KM389_20870 PF01316 Arginine repressor, DNA binding domain KM389_20875 PF01728 FtsJ-like methyltransferase KM389_20875 PF01479 S4 domain KM389_20880 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KM389_20880 PF02780 Transketolase, C-terminal domain KM389_20880 PF02779 Transketolase, pyrimidine binding domain KM389_20885 PF00348 Polyprenyl synthetase KM389_20890 PF02609 Exonuclease VII small subunit KM389_20895 PF13742 OB-fold nucleic acid binding domain KM389_20895 PF02601 Exonuclease VII, large subunit KM389_20900 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KM389_20900 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KM389_20905 PF01029 NusB family KM389_20910 PF03780 Asp23 family, cell envelope-related function KM389_20915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM389_20915 PF02785 Biotin carboxylase C-terminal domain KM389_20915 PF00289 Biotin carboxylase, N-terminal domain KM389_20920 PF00364 Biotin-requiring enzyme KM389_20930 PF12685 SpoIIIAH-like protein KM389_20940 PF09581 Stage III sporulation protein AF (Spore_III_AF) KM389_20945 PF09546 Stage III sporulation protein AE (spore_III_AE) KM389_20950 PF06686 Stage III sporulation protein AC/AD protein family KM389_20955 PF06686 Stage III sporulation protein AC/AD protein family KM389_20960 PF09548 Stage III sporulation protein AB (spore_III_AB) KM389_20985 PF09285 Elongation factor P, C-terminal KM389_20985 PF01132 Elongation factor P (EF-P) OB domain KM389_20985 PF08207 Elongation factor P (EF-P) KOW-like domain KM389_20990 PF00557 Metallopeptidase family M24 KM389_20990 PF01321 Creatinase/Prolidase N-terminal domain KM389_20995 PF01220 Dehydroquinase class II KM389_21000 PF11085 Conserved membrane protein YqhR KM389_21005 PF07136 Protein of unknown function (DUF1385) KM389_21015 PF13419 Haloacid dehalogenase-like hydrolase KM389_21020 PF02742 Iron dependent repressor, metal binding and dimerisation domain KM389_21020 PF01325 Iron dependent repressor, N-terminal DNA binding domain KM389_21035 PF03099 Biotin/lipoate A/B protein ligase family KM389_21040 PF00581 Rhodanese-like domain KM389_21045 PF00356 Bacterial regulatory proteins, lacI family KM389_21045 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM389_21055 PF00893 Small Multidrug Resistance protein KM389_21060 PF00893 Small Multidrug Resistance protein KM389_21095 PF00005 ABC transporter KM389_21100 PF00392 Bacterial regulatory proteins, gntR family KM389_21115 PF02347 Glycine cleavage system P-protein KM389_21120 PF02347 Glycine cleavage system P-protein KM389_21125 PF08669 Glycine cleavage T-protein C-terminal barrel domain KM389_21125 PF01571 Aminomethyltransferase folate-binding domain KM389_21130 PF00271 Helicase conserved C-terminal domain KM389_21130 PF00176 SNF2 family N-terminal domain KM389_21135 PF11079 Bacterial protein YqhG of unknown function KM389_21155 PF14038 YqzE-like protein KM389_21160 PF01202 Shikimate kinase KM389_21185 PF07963 Prokaryotic N-terminal methylation motif KM389_21195 PF00482 Type II secretion system (T2SS), protein F KM389_21200 PF00437 Type II/IV secretion system protein KM389_21210 PF11117 Protein of unknown function (DUF2626) KM389_21215 PF00375 Sodium:dicarboxylate symporter family KM389_21250 PF03033 Glycosyltransferase family 28 N-terminal domain KM389_21250 PF04101 Glycosyltransferase family 28 C-terminal domain KM389_21255 PF02607 B12 binding domain KM389_21255 PF02965 Vitamin B12 dependent methionine synthase, activation domain KM389_21255 PF00809 Pterin binding enzyme KM389_21255 PF02574 Homocysteine S-methyltransferase KM389_21255 PF02310 B12 binding domain KM389_21260 PF02219 Methylenetetrahydrofolate reductase KM389_21260 PF02574 Homocysteine S-methyltransferase KM389_21265 PF01053 Cys/Met metabolism PLP-dependent enzyme KM389_21270 PF01053 Cys/Met metabolism PLP-dependent enzyme KM389_21280 PF01022 Bacterial regulatory protein, arsR family KM389_21290 PF00753 Metallo-beta-lactamase superfamily KM389_21295 PF10958 Protein of unknown function (DUF2759) KM389_21300 PF00480 ROK family KM389_21305 PF06014 Bacterial protein of unknown function (DUF910) KM389_21310 PF01812 5-formyltetrahydrofolate cyclo-ligase family KM389_21315 PF00471 Ribosomal protein L33 KM389_21320 PF00483 Nucleotidyl transferase KM389_21325 PF01895 PhoU domain KM389_21330 PF00005 ABC transporter KM389_21335 PF00528 Binding-protein-dependent transport system inner membrane component KM389_21340 PF00528 Binding-protein-dependent transport system inner membrane component KM389_21345 PF12849 PBP superfamily domain KM389_21350 PF03717 Penicillin-binding Protein dimerisation domain KM389_21350 PF00905 Penicillin binding protein transpeptidase domain KM389_21355 PF07690 Major Facilitator Superfamily KM389_21360 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM389_21360 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM389_21380 PF04551 GcpE protein KM389_21385 PF01475 Ferric uptake regulator family KM389_21390 PF00950 ABC 3 transport family KM389_21395 PF00005 ABC transporter KM389_21400 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM389_21400 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM389_21405 PF11116 Protein of unknown function (DUF2624) KM389_21410 PF01261 Xylose isomerase-like TIM barrel KM389_21415 PF00270 DEAD/DEAH box helicase KM389_21415 PF00271 Helicase conserved C-terminal domain KM389_21425 PF02401 LytB protein KM389_21430 PF01784 NIF3 (NGG1p interacting factor 3) KM389_21435 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KM389_21440 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM389_21445 PF03979 Sigma-70 factor, region 1.1 KM389_21445 PF00140 Sigma-70 factor, region 1.2 KM389_21445 PF04542 Sigma-70 region 2 KM389_21445 PF04539 Sigma-70 region 3 KM389_21445 PF04545 Sigma-70, region 4 KM389_21450 PF10410 DnaB-helicase binding domain of primase KM389_21450 PF01807 CHC2 zinc finger KM389_21450 PF08275 DNA primase catalytic core, N-terminal domain KM389_21455 PF03618 Kinase/pyrophosphorylase KM389_21460 PF00571 CBS domain KM389_21460 PF08279 HTH domain KM389_21465 PF11967 Recombination protein O N terminal KM389_21465 PF02565 Recombination protein O C terminal KM389_21475 PF07650 KH domain KM389_21475 PF01926 50S ribosome-binding GTPase KM389_21480 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM389_21485 PF01219 Prokaryotic diacylglycerol kinase KM389_21490 PF02130 Uncharacterized protein family UPF0054 KM389_21495 PF07698 7TM receptor with intracellular HD hydrolase KM389_21495 PF07697 7TM-HD extracellular KM389_21495 PF01966 HD domain KM389_21500 PF02562 PhoH-like protein KM389_21505 PF06898 Putative stage IV sporulation protein YqfD KM389_21510 PF07873 YabP family KM389_21515 PF09424 Yqey-like protein KM389_21520 PF01165 Ribosomal protein S21 KM389_21525 PF01938 TRAM domain KM389_21525 PF00919 Uncharacterized protein family UPF0004 KM389_21525 PF04055 Radical SAM superfamily KM389_21530 PF04452 RNA methyltransferase KM389_21540 PF00226 DnaJ domain KM389_21540 PF01556 DnaJ C terminal domain KM389_21540 PF00684 DnaJ central domain KM389_21545 PF00012 Hsp70 protein KM389_21550 PF01025 GrpE KM389_21555 PF01628 HrcA protein C terminal domain KM389_21560 PF06969 HemN C-terminal domain KM389_21560 PF04055 Radical SAM superfamily KM389_21565 PF01638 HxlR-like helix-turn-helix KM389_21570 PF06421 GTP-binding protein LepA C-terminus KM389_21570 PF00009 Elongation factor Tu GTP binding domain KM389_21570 PF00679 Elongation factor G C-terminus KM389_21570 PF03144 Elongation factor Tu domain 2 KM389_21580 PF03418 Germination protease KM389_21585 PF01649 Ribosomal protein S20 KM389_21590 PF06144 DNA polymerase III, delta subunit KM389_21595 PF14141 YqzM-like protein KM389_21600 PF03772 Competence protein KM389_21600 PF00753 Metallo-beta-lactamase superfamily KM389_21600 PF13567 Domain of unknown function (DUF4131) KM389_21605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM389_21610 PF10531 SLBB domain KM389_21615 PF03807 NADP oxidoreductase coenzyme F420-dependent KM389_21615 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM389_21620 PF13649 Methyltransferase domain KM389_21630 PF01966 HD domain KM389_21635 PF01467 Cytidylyltransferase-like KM389_21640 PF01985 CRS1 / YhbY (CRM) domain KM389_21645 PF08501 Shikimate dehydrogenase substrate binding domain KM389_21645 PF01488 Shikimate / quinate 5-dehydrogenase KM389_21645 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KM389_21650 PF01926 50S ribosome-binding GTPase KM389_21665 PF02666 Phosphatidylserine decarboxylase KM389_21670 PF04542 Sigma-70 region 2 KM389_21670 PF04545 Sigma-70, region 4 KM389_21680 PF16244 Domain of unknown function (DUF4901) KM389_21685 PF00471 Ribosomal protein L33 KM389_21690 PF00881 Nitroreductase family KM389_21695 PF04607 Region found in RelA / SpoT proteins KM389_21705 PF00245 Alkaline phosphatase KM389_21715 PF00561 alpha/beta hydrolase fold KM389_21715 PF08386 TAP-like protein KM389_21750 PF02225 PA domain KM389_21750 PF13860 FlgD Ig-like domain KM389_21750 PF05922 Peptidase inhibitor I9 KM389_21750 PF00082 Subtilase family KM389_21755 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KM389_21770 PF07681 DoxX KM389_21800 PF00005 ABC transporter KM389_21805 PF01032 FecCD transport family KM389_21810 PF01497 Periplasmic binding protein KM389_21815 PF14143 YrhC-like protein KM389_21820 PF00171 Aldehyde dehydrogenase family KM389_21820 PF00465 Iron-containing alcohol dehydrogenase KM389_21825 PF01053 Cys/Met metabolism PLP-dependent enzyme KM389_21830 PF00291 Pyridoxal-phosphate dependent enzyme KM389_21835 PF01048 Phosphorylase superfamily KM389_21840 PF08241 Methyltransferase domain KM389_21855 PF00905 Penicillin binding protein transpeptidase domain KM389_21855 PF03717 Penicillin-binding Protein dimerisation domain KM389_21860 PF01272 Transcription elongation factor, GreA/GreB, C-term KM389_21860 PF03449 Transcription elongation factor, N-terminal KM389_21865 PF00485 Phosphoribulokinase / Uridine kinase family KM389_21870 PF01136 Peptidase family U32 KM389_21870 PF16325 Peptidase family U32 C-terminal domain KM389_21875 PF01136 Peptidase family U32 KM389_21880 PF01596 O-methyltransferase KM389_21885 PF02618 YceG-like family KM389_21890 PF06949 Protein of unknown function (DUF1292) KM389_21895 PF03652 Holliday junction resolvase KM389_21900 PF06135 IreB regulatory phosphoprotein KM389_21905 PF01411 tRNA synthetases class II (A) KM389_21905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM389_21905 PF02272 DHHA1 domain KM389_21915 PF01594 AI-2E family transporter KM389_21935 PF14490 Helix-hairpin-helix containing domain KM389_21935 PF13538 UvrD-like helicase C-terminal domain KM389_21935 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KM389_21950 PF00266 Aminotransferase class-V KM389_21955 PF02082 Transcriptional regulator KM389_21960 PF16193 AAA C-terminal domain KM389_21960 PF12002 MgsA AAA+ ATPase C terminal KM389_21960 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM389_21970 PF00899 ThiF family KM389_21975 PF02938 GAD domain KM389_21975 PF00152 tRNA synthetases class II (D, K and N) KM389_21975 PF01336 OB-fold nucleic acid binding domain KM389_21980 PF03129 Anticodon binding domain KM389_21980 PF13393 Histidyl-tRNA synthetase KM389_21990 PF02580 D-Tyr-tRNA(Tyr) deacylase KM389_21995 PF04607 Region found in RelA / SpoT proteins KM389_21995 PF13291 ACT domain KM389_21995 PF02824 TGS domain KM389_22000 PF00156 Phosphoribosyl transferase domain KM389_22005 PF01368 DHH family KM389_22005 PF02272 DHHA1 domain KM389_22005 PF17768 RecJ OB domain KM389_22005 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KM389_22010 PF01545 Cation efflux family KM389_22010 PF16916 Dimerisation domain of Zinc Transporter KM389_22015 PF02355 Protein export membrane protein KM389_22015 PF07549 SecD/SecF GG Motif KM389_22020 PF13797 Post-transcriptional regulator KM389_22025 PF14667 Polysaccharide biosynthesis C-terminal domain KM389_22025 PF01943 Polysaccharide biosynthesis protein KM389_22030 PF04239 Protein of unknown function (DUF421) KM389_22040 PF02699 Preprotein translocase subunit KM389_22045 PF01702 Queuine tRNA-ribosyltransferase KM389_22050 PF02547 Queuosine biosynthesis protein KM389_22055 PF11146 Protein of unknown function (DUF2905) KM389_22060 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM389_22060 PF17864 RuvB AAA lid domain KM389_22060 PF05491 RuvB C-terminal winged helix domain KM389_22065 PF07499 RuvA, C-terminal domain KM389_22065 PF01330 RuvA N terminal domain KM389_22070 PF01497 Periplasmic binding protein KM389_22080 PF00892 EamA-like transporter family KM389_22085 PF00892 EamA-like transporter family KM389_22090 PF01022 Bacterial regulatory protein, arsR family KM389_22105 PF01476 LysM domain KM389_22110 PF02445 Quinolinate synthetase A protein KM389_22115 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KM389_22115 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KM389_22120 PF02910 Fumarate reductase flavoprotein C-term KM389_22120 PF00890 FAD binding domain KM389_22125 PF00266 Aminotransferase class-V KM389_22130 PF02829 3H domain KM389_22130 PF08279 HTH domain KM389_22135 PF03473 MOSC domain KM389_22135 PF03475 3-alpha domain KM389_22140 PF01842 ACT domain KM389_22140 PF00800 Prephenate dehydratase KM389_22145 PF02687 FtsX-like permease family KM389_22150 PF02687 FtsX-like permease family KM389_22155 PF00005 ABC transporter KM389_22165 PF00486 Transcriptional regulatory protein, C terminal KM389_22165 PF00072 Response regulator receiver domain KM389_22170 PF01018 GTP1/OBG KM389_22170 PF09269 Domain of unknown function (DUF1967) KM389_22170 PF01926 50S ribosome-binding GTPase KM389_22175 PF14682 Sporulation initiation phospho-transferase B, C-terminal KM389_22175 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM389_22180 PF01016 Ribosomal L27 protein KM389_22185 PF04327 Cysteine protease Prp KM389_22190 PF00829 Ribosomal prokaryotic L21 protein KM389_22195 PF10150 Ribonuclease E/G family KM389_22195 PF00575 S1 RNA binding domain KM389_22200 PF02163 Peptidase family M50 KM389_22205 PF01551 Peptidase family M23 KM389_22210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KM389_22215 PF03775 Septum formation inhibitor MinC, C-terminal domain KM389_22225 PF04085 rod shape-determining protein MreC KM389_22235 PF04002 RadC-like JAB domain KM389_22240 PF02545 Maf-like protein KM389_22250 PF02875 Mur ligase family, glutamate ligase domain KM389_22250 PF08245 Mur ligase middle domain KM389_22255 PF08264 Anticodon-binding domain of tRNA KM389_22255 PF00133 tRNA synthetases class I (I, L, M and V) KM389_22255 PF10458 Valyl tRNA synthetase tRNA binding arm KM389_22265 PF01476 LysM domain KM389_22270 PF00202 Aminotransferase class-III KM389_22275 PF00490 Delta-aminolevulinic acid dehydratase KM389_22280 PF02602 Uroporphyrinogen-III synthase HemD KM389_22285 PF03900 Porphobilinogen deaminase, C-terminal domain KM389_22285 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KM389_22290 PF01578 Cytochrome C assembly protein KM389_22295 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KM389_22295 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KM389_22295 PF01488 Shikimate / quinate 5-dehydrogenase KM389_22300 PF01047 MarR family KM389_22305 PF02566 OsmC-like protein KM389_22310 PF01926 50S ribosome-binding GTPase KM389_22315 PF00004 ATPase family associated with various cellular activities (AAA) KM389_22315 PF05362 Lon protease (S16) C-terminal proteolytic domain KM389_22315 PF02190 ATP-dependent protease La (LON) substrate-binding domain KM389_22320 PF00004 ATPase family associated with various cellular activities (AAA) KM389_22320 PF05362 Lon protease (S16) C-terminal proteolytic domain KM389_22325 PF10431 C-terminal, D2-small domain, of ClpB protein KM389_22325 PF07724 AAA domain (Cdc48 subfamily) KM389_22325 PF06689 ClpX C4-type zinc finger KM389_22330 PF05698 Bacterial trigger factor protein (TF) C-terminus KM389_22330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM389_22330 PF05697 Bacterial trigger factor protein (TF) KM389_22345 PF08000 Bacterial PH domain KM389_22345 PF11724 YvbH-like oligomerisation region KM389_22365 PF12850 Calcineurin-like phosphoesterase superfamily domain KM389_22370 PF01725 Ham1 family KM389_22375 PF01138 3' exoribonuclease family, domain 1 KM389_22375 PF03725 3' exoribonuclease family, domain 2 KM389_22380 PF10646 Sporulation and spore germination KM389_22385 PF01177 Asp/Glu/Hydantoin racemase KM389_22390 PF07690 Major Facilitator Superfamily KM389_22400 PF00440 Bacterial regulatory proteins, tetR family KM389_22415 PF00196 Bacterial regulatory proteins, luxR family KM389_22420 PF00860 Permease family KM389_22430 PF07969 Amidohydrolase family KM389_22435 PF07969 Amidohydrolase family KM389_22440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_22445 PF00528 Binding-protein-dependent transport system inner membrane component KM389_22445 PF12911 N-terminal TM domain of oligopeptide transport permease C KM389_22450 PF00528 Binding-protein-dependent transport system inner membrane component KM389_22455 PF00005 ABC transporter KM389_22455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM389_22460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM389_22460 PF00005 ABC transporter KM389_22465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_22465 PF06580 Histidine kinase KM389_22465 PF07694 5TMR of 5TMR-LYT KM389_22470 PF00072 Response regulator receiver domain KM389_22470 PF04397 LytTr DNA-binding domain KM389_22485 PF04024 PspC domain KM389_22490 PF07883 Cupin domain KM389_22490 PF01381 Helix-turn-helix KM389_22495 PF13536 Putative multidrug resistance efflux transporter KM389_22500 PF00230 Major intrinsic protein KM389_22505 PF02082 Transcriptional regulator KM389_22515 PF00005 ABC transporter KM389_22515 PF13732 Domain of unknown function (DUF4162) KM389_22520 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KM389_22530 PF01618 MotA/TolQ/ExbB proton channel family KM389_22535 PF02557 D-alanyl-D-alanine carboxypeptidase KM389_22540 PF03061 Thioesterase superfamily KM389_22545 PF13085 2Fe-2S iron-sulfur cluster binding domain KM389_22545 PF13183 4Fe-4S dicluster domain KM389_22550 PF00890 FAD binding domain KM389_22550 PF02910 Fumarate reductase flavoprotein C-term KM389_22555 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KM389_22560 PF10702 Protein of unknown function (DUF2507) KM389_22565 PF01541 GIY-YIG catalytic domain KM389_22565 PF02151 UvrB/uvrC motif KM389_22565 PF08459 UvrC Helix-hairpin-helix N-terminal KM389_22570 PF00085 Thioredoxin KM389_22575 PF01012 Electron transfer flavoprotein domain KM389_22575 PF00766 Electron transfer flavoprotein FAD-binding domain KM389_22580 PF01012 Electron transfer flavoprotein domain KM389_22585 PF00378 Enoyl-CoA hydratase/isomerase KM389_22590 PF00440 Bacterial regulatory proteins, tetR family KM389_22590 PF08359 YsiA-like protein, C-terminal region KM389_22595 PF00501 AMP-binding enzyme KM389_22595 PF13193 AMP-binding enzyme C-terminal domain KM389_22605 PF01497 Periplasmic binding protein KM389_22610 PF01032 FecCD transport family KM389_22615 PF05163 DinB family KM389_22645 PF00005 ABC transporter KM389_22650 PF00512 His Kinase A (phospho-acceptor) domain KM389_22650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_22655 PF00072 Response regulator receiver domain KM389_22655 PF00486 Transcriptional regulatory protein, C terminal KM389_22665 PF09962 Uncharacterized conserved protein (DUF2196) KM389_22670 PF10672 S-adenosylmethionine-dependent methyltransferase KM389_22670 PF17785 PUA-like domain KM389_22680 PF03992 Antibiotic biosynthesis monooxygenase KM389_22685 PF04203 Sortase domain KM389_22690 PF00005 ABC transporter KM389_22695 PF01032 FecCD transport family KM389_22700 PF01497 Periplasmic binding protein KM389_22705 PF05031 Iron Transport-associated domain KM389_22715 PF05031 Iron Transport-associated domain KM389_22720 PF05525 Branched-chain amino acid transport protein KM389_22725 PF01479 S4 domain KM389_22725 PF00849 RNA pseudouridylate synthase KM389_22730 PF00488 MutS domain V KM389_22730 PF01713 Smr domain KM389_22735 PF14791 DNA polymerase beta thumb KM389_22735 PF14716 Helix-hairpin-helix domain KM389_22735 PF02811 PHP domain KM389_22740 PF02674 Colicin V production protein KM389_22745 PF05164 Cell division protein ZapA KM389_22750 PF11858 Domain of unknown function (DUF3378) KM389_22750 PF01351 Ribonuclease HII KM389_22770 PF00152 tRNA synthetases class II (D, K and N) KM389_22770 PF01336 OB-fold nucleic acid binding domain KM389_22775 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KM389_22775 PF01588 Putative tRNA binding domain KM389_22775 PF03484 tRNA synthetase B5 domain KM389_22775 PF03147 Ferredoxin-fold anticodon binding domain KM389_22775 PF03483 B3/4 domain KM389_22780 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KM389_22780 PF01409 tRNA synthetases class II core domain (F) KM389_22785 PF00588 SpoU rRNA Methylase family KM389_22785 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM389_22790 PF14098 Small, acid-soluble spore protein I KM389_22795 PF01966 HD domain KM389_22820 PF07690 Major Facilitator Superfamily KM389_22830 PF16859 Tetracyclin repressor-like, C-terminal domain KM389_22830 PF00440 Bacterial regulatory proteins, tetR family KM389_22835 PF05343 M42 glutamyl aminopeptidase KM389_22845 PF00453 Ribosomal protein L20 KM389_22850 PF01632 Ribosomal protein L35 KM389_22855 PF05198 Translation initiation factor IF-3, N-terminal domain KM389_22855 PF00707 Translation initiation factor IF-3, C-terminal domain KM389_22860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM389_22860 PF03129 Anticodon binding domain KM389_22860 PF02824 TGS domain KM389_22860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM389_22865 PF08812 YtxC-like family KM389_22870 PF01695 IstB-like ATP binding protein KM389_22870 PF07319 Primosomal protein DnaI N-terminus KM389_22875 PF07261 Replication initiation and membrane attachment KM389_22880 PF03477 ATP cone domain KM389_22885 PF02675 S-adenosylmethionine decarboxylase KM389_22890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM389_22890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM389_22895 PF01121 Dephospho-CoA kinase KM389_22900 PF02659 Putative manganese efflux pump KM389_22905 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KM389_22905 PF06827 Zinc finger found in FPG and IleRS KM389_22905 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KM389_22910 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM389_22910 PF00476 DNA polymerase family A KM389_22910 PF01367 5'-3' exonuclease, C-terminal SAM fold KM389_22915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_22915 PF16736 Single Cache-like KM389_22915 PF00512 His Kinase A (phospho-acceptor) domain KM389_22915 PF00989 PAS fold KM389_22920 PF00072 Response regulator receiver domain KM389_22920 PF00486 Transcriptional regulatory protein, C terminal KM389_22935 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM389_22935 PF00056 lactate/malate dehydrogenase, NAD binding domain KM389_22940 PF00180 Isocitrate/isopropylmalate dehydrogenase KM389_22945 PF00285 Citrate synthase, C-terminal domain KM389_22950 PF04284 Protein of unknown function (DUF441) KM389_22955 PF01594 AI-2E family transporter KM389_22960 PF04186 FxsA cytoplasmic membrane protein KM389_22965 PF00391 PEP-utilising enzyme, mobile domain KM389_22965 PF00224 Pyruvate kinase, barrel domain KM389_22965 PF02887 Pyruvate kinase, alpha/beta domain KM389_22970 PF00365 Phosphofructokinase KM389_22975 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KM389_22980 PF17848 Acetyl-coA carboxylase zinc finger domain KM389_22980 PF01039 Carboxyl transferase domain KM389_22985 PF00392 Bacterial regulatory proteins, gntR family KM389_22990 PF00390 Malic enzyme, N-terminal domain KM389_22990 PF03949 Malic enzyme, NAD binding domain KM389_22995 PF02811 PHP domain KM389_22995 PF01336 OB-fold nucleic acid binding domain KM389_22995 PF14579 Helix-hairpin-helix motif KM389_22995 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM389_22995 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM389_23000 PF14034 Sporulation protein YtrH KM389_23010 PF02272 DHHA1 domain KM389_23010 PF01368 DHH family KM389_23015 PF14007 YtpI-like protein KM389_23030 PF03061 Thioesterase superfamily KM389_23030 PF00571 CBS domain KM389_23030 PF07085 DRTGG domain KM389_23030 PF00392 Bacterial regulatory proteins, gntR family KM389_23045 PF01321 Creatinase/Prolidase N-terminal domain KM389_23045 PF00557 Metallopeptidase family M24 KM389_23050 PF11518 Protein of unknown function (DUF3221) KM389_23080 PF12746 GNAT acetyltransferase KM389_23085 PF07883 Cupin domain KM389_23095 PF01381 Helix-turn-helix KM389_23105 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM389_23105 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM389_23115 PF00582 Universal stress protein family KM389_23135 PF14698 Argininosuccinate lyase C-terminal KM389_23135 PF00206 Lyase KM389_23140 PF00764 Arginosuccinate synthase KM389_23155 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM389_23155 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM389_23160 PF12787 EcsC protein family KM389_23175 PF00871 Acetokinase family KM389_23180 PF02384 N-6 DNA Methylase KM389_23185 PF08534 Redoxin KM389_23190 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM389_23200 PF01513 ATP-NAD kinase KM389_23205 PF07969 Amidohydrolase family KM389_23215 PF00501 AMP-binding enzyme KM389_23215 PF13193 AMP-binding enzyme C-terminal domain KM389_23220 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM389_23225 PF02926 THUMP domain KM389_23225 PF02568 Thiamine biosynthesis protein (ThiI) KM389_23230 PF00266 Aminotransferase class-V KM389_23235 PF06160 Septation ring formation regulator, EzrA KM389_23240 PF03466 LysR substrate binding domain KM389_23240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM389_23245 PF00892 EamA-like transporter family KM389_23255 PF13185 GAF domain KM389_23260 PF01053 Cys/Met metabolism PLP-dependent enzyme KM389_23265 PF00163 Ribosomal protein S4/S9 N-terminal domain KM389_23265 PF01479 S4 domain KM389_23280 PF01479 S4 domain KM389_23280 PF00579 tRNA synthetases class I (W and Y) KM389_23290 PF08281 Sigma-70, region 4 KM389_23290 PF04542 Sigma-70 region 2 KM389_23300 PF13193 AMP-binding enzyme C-terminal domain KM389_23300 PF00501 AMP-binding enzyme KM389_23305 PF00583 Acetyltransferase (GNAT) family KM389_23310 PF00571 CBS domain KM389_23315 PF00850 Histone deacetylase domain KM389_23325 PF00486 Transcriptional regulatory protein, C terminal KM389_23325 PF00072 Response regulator receiver domain KM389_23330 PF00512 His Kinase A (phospho-acceptor) domain KM389_23330 PF00989 PAS fold KM389_23330 PF00672 HAMP domain KM389_23330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_23335 PF12796 Ankyrin repeats (3 copies) KM389_23340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM389_23345 PF01741 Large-conductance mechanosensitive channel, MscL KM389_23370 PF00356 Bacterial regulatory proteins, lacI family KM389_23375 PF07537 CamS sex pheromone cAM373 precursor KM389_23380 PF11009 Protein of unknown function (DUF2847) KM389_23390 PF02073 Thermophilic metalloprotease (M29) KM389_23410 PF13302 Acetyltransferase (GNAT) domain KM389_23415 PF02875 Mur ligase family, glutamate ligase domain KM389_23415 PF01225 Mur ligase family, catalytic domain KM389_23415 PF08245 Mur ligase middle domain KM389_23425 PF09397 Ftsk gamma domain KM389_23425 PF01580 FtsK/SpoIIIE family KM389_23425 PF17854 FtsK alpha domain KM389_23435 PF14794 Domain of unknown function (DUF4479) KM389_23435 PF01588 Putative tRNA binding domain KM389_23440 PF07285 Protein of unknown function (DUF1444) KM389_23445 PF00085 Thioredoxin KM389_23450 PF01931 Protein of unknown function DUF84 KM389_23455 PF05343 M42 glutamyl aminopeptidase KM389_23465 PF00753 Metallo-beta-lactamase superfamily KM389_23470 PF02390 Putative methyltransferase KM389_23475 PF14165 YtzH-like protein KM389_23480 PF01636 Phosphotransferase enzyme family KM389_23485 PF17999 Pullulanase N1-terminal domain KM389_23485 PF00128 Alpha amylase, catalytic domain KM389_23485 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM389_23490 PF02834 LigT like Phosphoesterase KM389_23500 PF08220 DeoR-like helix-turn-helix domain KM389_23505 PF00849 RNA pseudouridylate synthase KM389_23505 PF01479 S4 domain KM389_23510 PF14667 Polysaccharide biosynthesis C-terminal domain KM389_23510 PF01943 Polysaccharide biosynthesis protein KM389_23520 PF07690 Major Facilitator Superfamily KM389_23525 PF01022 Bacterial regulatory protein, arsR family KM389_23530 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KM389_23540 PF10957 Sporulation protein Cse60 KM389_23550 PF02559 CarD-like/TRCF domain KM389_23560 PF06800 Sugar transport protein KM389_23575 PF02391 MoaE protein KM389_23580 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KM389_23585 PF03453 MoeA N-terminal region (domain I and II) KM389_23585 PF03454 MoeA C-terminal region (domain IV) KM389_23585 PF00994 Probable molybdopterin binding domain KM389_23590 PF01967 MoaC family KM389_23595 PF00899 ThiF family KM389_23620 PF00581 Rhodanese-like domain KM389_23630 PF00561 alpha/beta hydrolase fold KM389_23635 PF03323 Bacillus/Clostridium GerA spore germination protein KM389_23640 PF03845 Spore germination protein KM389_23665 PF13603 Leucyl-tRNA synthetase, Domain 2 KM389_23665 PF09334 tRNA synthetases class I (M) KM389_23665 PF08264 Anticodon-binding domain of tRNA KM389_23665 PF00133 tRNA synthetases class I (I, L, M and V) KM389_23670 PF07690 Major Facilitator Superfamily KM389_23675 PF00999 Sodium/hydrogen exchanger family KM389_23680 PF02080 TrkA-C domain KM389_23685 PF00589 Phage integrase family KM389_23695 PF00005 ABC transporter KM389_23700 PF07786 Protein of unknown function (DUF1624) KM389_23700 PF04235 Protein of unknown function (DUF418) KM389_23710 PF10732 Protein of unknown function (DUF2524) KM389_23715 PF04055 Radical SAM superfamily KM389_23715 PF16199 Radical_SAM C-terminal domain KM389_23720 PF06962 Putative rRNA methylase KM389_23725 PF00005 ABC transporter KM389_23725 PF13732 Domain of unknown function (DUF4162) KM389_23735 PF01177 Asp/Glu/Hydantoin racemase KM389_23750 PF10776 Protein of unknown function (DUF2600) KM389_23755 PF12146 Serine aminopeptidase, S33 KM389_23760 PF00132 Bacterial transferase hexapeptide (six repeats) KM389_23765 PF01569 PAP2 superfamily KM389_23770 PF00534 Glycosyl transferases group 1 KM389_23770 PF13439 Glycosyltransferase Family 4 KM389_23775 PF12804 MobA-like NTP transferase domain KM389_23780 PF00994 Probable molybdopterin binding domain KM389_23795 PF02772 S-adenosylmethionine synthetase, central domain KM389_23795 PF02773 S-adenosylmethionine synthetase, C-terminal domain KM389_23795 PF00438 S-adenosylmethionine synthetase, N-terminal domain KM389_23800 PF01293 Phosphoenolpyruvate carboxykinase KM389_23835 PF01784 NIF3 (NGG1p interacting factor 3) KM389_23840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_23840 PF00512 His Kinase A (phospho-acceptor) domain KM389_23840 PF00989 PAS fold KM389_23840 PF13188 PAS domain KM389_23840 PF13426 PAS domain KM389_23845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_23845 PF00989 PAS fold KM389_23845 PF08447 PAS fold KM389_23845 PF00512 His Kinase A (phospho-acceptor) domain KM389_23850 PF08386 TAP-like protein KM389_23850 PF00561 alpha/beta hydrolase fold KM389_23875 PF00005 ABC transporter KM389_23880 PF00528 Binding-protein-dependent transport system inner membrane component KM389_23905 PF00293 NUDIX domain KM389_23925 PF02664 S-Ribosylhomocysteinase (LuxS) KM389_23930 PF01809 Putative membrane protein insertion efficiency factor KM389_23935 PF00484 Carbonic anhydrase KM389_23940 PF01654 Cytochrome bd terminal oxidase subunit I KM389_23945 PF02322 Cytochrome bd terminal oxidase subunit II KM389_23950 PF10676 Spore germination protein gerPA/gerPF KM389_23965 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM389_23965 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM389_23990 PF04012 PspA/IM30 family KM389_24005 PF07664 Ferrous iron transport protein B C terminus KM389_24005 PF17910 FeoB cytosolic helical domain KM389_24005 PF02421 Ferrous iron transport protein B KM389_24005 PF07670 Nucleoside recognition KM389_24015 PF09515 Thiamine transporter protein (Thia_YuaJ) KM389_24020 PF00672 HAMP domain KM389_24020 PF00512 His Kinase A (phospho-acceptor) domain KM389_24020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_24025 PF00486 Transcriptional regulatory protein, C terminal KM389_24025 PF00072 Response regulator receiver domain KM389_24050 PF00156 Phosphoribosyl transferase domain KM389_24055 PF00781 Diacylglycerol kinase catalytic domain KM389_24075 PF00248 Aldo/keto reductase family KM389_24090 PF09335 SNARE associated Golgi protein KM389_24095 PF00398 Ribosomal RNA adenine dimethylase KM389_24100 PF02687 FtsX-like permease family KM389_24105 PF00005 ABC transporter KM389_24110 PF06445 GyrI-like small molecule binding domain KM389_24110 PF12833 Helix-turn-helix domain KM389_24115 PF00486 Transcriptional regulatory protein, C terminal KM389_24115 PF00072 Response regulator receiver domain KM389_24120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_24125 PF02687 FtsX-like permease family KM389_24135 PF02687 FtsX-like permease family KM389_24140 PF00005 ABC transporter KM389_24155 PF02447 GntP family permease KM389_24160 PF07702 UTRA domain KM389_24160 PF00392 Bacterial regulatory proteins, gntR family KM389_24170 PF07071 KDGP aldolase KM389_24175 PF03841 L-seryl-tRNA selenium transferase KM389_24180 PF01979 Amidohydrolase family KM389_24195 PF02557 D-alanyl-D-alanine carboxypeptidase KM389_24200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_24200 PF00512 His Kinase A (phospho-acceptor) domain KM389_24205 PF00486 Transcriptional regulatory protein, C terminal KM389_24205 PF00072 Response regulator receiver domain KM389_24210 PF13378 Enolase C-terminal domain-like KM389_24210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM389_24215 PF00501 AMP-binding enzyme KM389_24215 PF13193 AMP-binding enzyme C-terminal domain KM389_24220 PF00378 Enoyl-CoA hydratase/isomerase KM389_24225 PF00561 alpha/beta hydrolase fold KM389_24230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM389_24230 PF16582 Middle domain of thiamine pyrophosphate KM389_24230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM389_24235 PF00425 chorismate binding enzyme KM389_24240 PF01040 UbiA prenyltransferase family KM389_24245 PF01258 Prokaryotic dksA/traR C4-type zinc finger KM389_24250 PF00313 'Cold-shock' DNA-binding domain KM389_24265 PF00343 Carbohydrate phosphorylase KM389_24270 PF08323 Starch synthase catalytic domain KM389_24270 PF00534 Glycosyl transferases group 1 KM389_24275 PF00483 Nucleotidyl transferase KM389_24280 PF00483 Nucleotidyl transferase KM389_24285 PF00128 Alpha amylase, catalytic domain KM389_24285 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM389_24285 PF02806 Alpha amylase, C-terminal all-beta domain KM389_24300 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM389_24300 PF00056 lactate/malate dehydrogenase, NAD binding domain KM389_24395 PF05697 Bacterial trigger factor protein (TF) KM389_24395 PF05698 Bacterial trigger factor protein (TF) C-terminus KM389_24430 PF02308 MgtC family KM389_24435 PF07885 Ion channel KM389_24435 PF02254 TrkA-N domain KM389_24440 PF08868 YugN-like family KM389_24445 PF00342 Phosphoglucose isomerase KM389_24450 PF04070 Domain of unknown function (DUF378) KM389_24455 PF00575 S1 RNA binding domain KM389_24460 PF00155 Aminotransferase class I and II KM389_24465 PF01037 Lrp/AsnC ligand binding domain KM389_24470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM389_24470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM389_24475 PF08386 TAP-like protein KM389_24475 PF00561 alpha/beta hydrolase fold KM389_24485 PF00155 Aminotransferase class I and II KM389_24500 PF08810 Kinase associated protein B KM389_24505 PF00929 Exonuclease KM389_24510 PF03600 Citrate transporter KM389_24525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM389_24525 PF03129 Anticodon binding domain KM389_24530 PF03061 Thioesterase superfamily KM389_24540 PF02632 BioY family KM389_24550 PF00483 Nucleotidyl transferase KM389_24555 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM389_24555 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM389_24555 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM389_24555 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM389_24560 PF10372 Bacterial membrane-spanning protein N-terminus KM389_24560 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM389_24565 PF00883 Cytosol aminopeptidase family, catalytic domain KM389_24565 PF02789 Cytosol aminopeptidase family, N-terminal domain KM389_24570 PF06725 3D domain KM389_24580 PF00293 NUDIX domain KM389_24580 PF13344 Haloacid dehalogenase-like hydrolase KM389_24585 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_24590 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_24600 PF06445 GyrI-like small molecule binding domain KM389_24615 PF04463 Protein of unknown function (DUF523) KM389_24635 PF01521 Iron-sulphur cluster biosynthesis KM389_24640 PF01678 Diaminopimelate epimerase KM389_24645 PF07293 Protein of unknown function (DUF1450) KM389_24650 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_24660 PF00005 ABC transporter KM389_24660 PF09383 NIL domain KM389_24665 PF03649 Uncharacterised protein family (UPF0014) KM389_24670 PF03831 PhnA domain KM389_24670 PF08274 PhnA Zinc-Ribbon KM389_24705 PF13427 Domain of unknown function (DUF4111) KM389_24705 PF01909 Nucleotidyltransferase domain KM389_24710 PF07315 Protein of unknown function (DUF1462) KM389_24715 PF01106 NifU-like domain KM389_24730 PF04608 Phosphatidylglycerophosphatase A KM389_24740 PF02525 Flavodoxin-like fold KM389_24745 PF13344 Haloacid dehalogenase-like hydrolase KM389_24755 PF01934 Protein of unknown function DUF86 KM389_24760 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM389_24775 PF06265 Protein of unknown function (DUF1027) KM389_24780 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM389_24785 PF13411 MerR HTH family regulatory protein KM389_24785 PF07739 TipAS antibiotic-recognition domain KM389_24790 PF10086 YhfC intramembrane metalloprotease KM389_24810 PF04055 Radical SAM superfamily KM389_24810 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KM389_24815 PF01551 Peptidase family M23 KM389_24825 PF08827 Domain of unknown function (DUF1805) KM389_24830 PF02872 5'-nucleotidase, C-terminal domain KM389_24835 PF03551 Transcriptional regulator PadR-like family KM389_24840 PF04892 VanZ like family KM389_24845 PF01458 Uncharacterized protein family (UPF0051) KM389_24850 PF01592 NifU-like N terminal domain KM389_24855 PF00266 Aminotransferase class-V KM389_24860 PF01458 Uncharacterized protein family (UPF0051) KM389_24865 PF00005 ABC transporter KM389_24870 PF03180 NLPA lipoprotein KM389_24875 PF03180 NLPA lipoprotein KM389_24880 PF00528 Binding-protein-dependent transport system inner membrane component KM389_24885 PF09383 NIL domain KM389_24885 PF00005 ABC transporter KM389_24895 PF00085 Thioredoxin KM389_24900 PF01751 Toprim domain KM389_24905 PF01597 Glycine cleavage H-protein KM389_24910 PF03960 ArsC family KM389_24955 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM389_24955 PF00056 lactate/malate dehydrogenase, NAD binding domain KM389_24975 PF13305 Tetracyclin repressor-like, C-terminal domain KM389_24975 PF00440 Bacterial regulatory proteins, tetR family KM389_24980 PF00753 Metallo-beta-lactamase superfamily KM389_24985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM389_24985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM389_24985 PF02770 Acyl-CoA dehydrogenase, middle domain KM389_24990 PF02803 Thiolase, C-terminal domain KM389_24990 PF00108 Thiolase, N-terminal domain KM389_24995 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM389_24995 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM389_24995 PF00378 Enoyl-CoA hydratase/isomerase KM389_25000 PF14115 YuzL-like protein KM389_25005 PF00768 D-alanyl-D-alanine carboxypeptidase KM389_25005 PF07943 Penicillin-binding protein 5, C-terminal domain KM389_25010 PF01619 Proline dehydrogenase KM389_25015 PF10835 Protein of unknown function (DUF2573) KM389_25020 PF01910 Thiamine-binding protein KM389_25025 PF00672 HAMP domain KM389_25025 PF02743 Cache domain KM389_25025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM389_25045 PF07690 Major Facilitator Superfamily KM389_25050 PF13520 Amino acid permease KM389_25060 PF02096 60Kd inner membrane protein KM389_25070 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM389_25070 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM389_25105 PF09335 SNARE associated Golgi protein KM389_25115 PF17969 L,D-transpeptidase C-terminal domain KM389_25115 PF03734 L,D-transpeptidase catalytic domain KM389_25120 PF00072 Response regulator receiver domain KM389_25120 PF00486 Transcriptional regulatory protein, C terminal KM389_25125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_25125 PF16736 Single Cache-like KM389_25125 PF00989 PAS fold KM389_25125 PF00512 His Kinase A (phospho-acceptor) domain KM389_25135 PF08264 Anticodon-binding domain of tRNA KM389_25135 PF09334 tRNA synthetases class I (M) KM389_25145 PF02743 Cache domain KM389_25145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM389_25145 PF00672 HAMP domain KM389_25150 PF01883 Iron-sulfur cluster assembly protein KM389_25155 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM389_25155 PF01447 Thermolysin metallopeptidase, catalytic domain KM389_25155 PF07504 Fungalysin/Thermolysin Propeptide Motif KM389_25155 PF03413 Peptidase propeptide and YPEB domain KM389_25160 PF17954 Quercetinase C-terminal cupin domain KM389_25160 PF02678 Pirin KM389_25165 PF01047 MarR family KM389_25175 PF00999 Sodium/hydrogen exchanger family KM389_25180 PF02080 TrkA-C domain KM389_25185 PF01235 Sodium:alanine symporter family KM389_25190 PF00210 Ferritin-like domain KM389_25205 PF03641 Possible lysine decarboxylase KM389_25215 PF00210 Ferritin-like domain KM389_25225 PF01773 Na+ dependent nucleoside transporter N-terminus KM389_25225 PF07662 Na+ dependent nucleoside transporter C-terminus KM389_25230 PF01773 Na+ dependent nucleoside transporter N-terminus KM389_25230 PF07662 Na+ dependent nucleoside transporter C-terminus KM389_25235 PF01235 Sodium:alanine symporter family KM389_25240 PF01235 Sodium:alanine symporter family KM389_25245 PF13460 NAD(P)H-binding KM389_25260 PF00248 Aldo/keto reductase family KM389_25265 PF07690 Major Facilitator Superfamily KM389_25270 PF01638 HxlR-like helix-turn-helix KM389_25275 PF07849 Protein of unknown function (DUF1641) KM389_25280 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_25285 PF01479 S4 domain KM389_25285 PF00579 tRNA synthetases class I (W and Y) KM389_25290 PF01565 FAD binding domain KM389_25290 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM389_25300 PF00672 HAMP domain KM389_25300 PF17202 Single cache domain 3 KM389_25300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM389_25310 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM389_25315 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM389_25330 PF13302 Acetyltransferase (GNAT) domain KM389_25335 PF06146 Phosphate-starvation-inducible E KM389_25350 PF00005 ABC transporter KM389_25355 PF01032 FecCD transport family KM389_25360 PF01032 FecCD transport family KM389_25370 PF00486 Transcriptional regulatory protein, C terminal KM389_25370 PF00072 Response regulator receiver domain KM389_25380 PF01668 SmpB protein KM389_25385 PF00773 RNB domain KM389_25385 PF00575 S1 RNA binding domain KM389_25385 PF17876 Cold shock domain KM389_25385 PF08206 Ribonuclease B OB domain KM389_25390 PF12146 Serine aminopeptidase, S33 KM389_25395 PF03840 Preprotein translocase SecG subunit KM389_25400 PF04172 LrgB-like family KM389_25405 PF03788 LrgA family KM389_25410 PF01156 Inosine-uridine preferring nucleoside hydrolase KM389_25500 PF04860 Phage portal protein KM389_25525 PF00589 Phage integrase family KM389_25525 PF02899 Phage integrase, N-terminal SAM-like domain KM389_25530 PF03952 Enolase, N-terminal domain KM389_25530 PF00113 Enolase, C-terminal TIM barrel domain KM389_25535 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KM389_25535 PF01676 Metalloenzyme superfamily KM389_25540 PF00121 Triosephosphate isomerase KM389_25545 PF00162 Phosphoglycerate kinase KM389_25550 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM389_25550 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM389_25555 PF04198 Putative sugar-binding domain KM389_25565 PF00309 Sigma-54 factor, Activator interacting domain (AID) KM389_25565 PF04963 Sigma-54 factor, core binding domain KM389_25565 PF04552 Sigma-54, DNA binding domain KM389_25585 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM389_25590 PF07451 Stage V sporulation protein AD (SpoVAD) KM389_25595 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM389_25605 PF04239 Protein of unknown function (DUF421) KM389_25610 PF00574 Clp protease KM389_25615 PF00381 PTS HPr component phosphorylation site KM389_25620 PF02650 WhiA C-terminal HTH domain KM389_25620 PF14527 WhiA LAGLIDADG-like domain KM389_25620 PF10298 WhiA N-terminal LAGLIDADG-like domain KM389_25625 PF01933 Uncharacterised protein family UPF0052 KM389_25630 PF03668 P-loop ATPase protein family KM389_25635 PF00293 NUDIX domain KM389_25645 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM389_25655 PF14602 Hexapeptide repeat of succinyl-transferase KM389_25660 PF13419 Haloacid dehalogenase-like hydrolase KM389_25665 PF01790 Prolipoprotein diacylglyceryl transferase KM389_25670 PF07475 HPr Serine kinase C-terminal domain KM389_25670 PF02603 HPr Serine kinase N terminus KM389_25675 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KM389_25685 PF00005 ABC transporter KM389_25685 PF17755 UvrA DNA-binding domain KM389_25685 PF17760 UvrA interaction domain KM389_25690 PF00271 Helicase conserved C-terminal domain KM389_25690 PF04851 Type III restriction enzyme, res subunit KM389_25690 PF02151 UvrB/uvrC motif KM389_25690 PF12344 Ultra-violet resistance protein B KM389_25690 PF17757 UvrB interaction domain KM389_25695 PF07282 Putative transposase DNA-binding domain KM389_25695 PF01385 Probable transposase KM389_25695 PF12323 Helix-turn-helix domain KM389_25710 PF07739 TipAS antibiotic-recognition domain KM389_25710 PF13411 MerR HTH family regulatory protein KM389_25735 PF03601 Conserved hypothetical protein 698 KM389_25740 PF03466 LysR substrate binding domain KM389_25740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM389_25745 PF13411 MerR HTH family regulatory protein KM389_25750 PF03358 NADPH-dependent FMN reductase KM389_25755 PF12848 ABC transporter KM389_25755 PF00005 ABC transporter KM389_25765 PF00664 ABC transporter transmembrane region KM389_25765 PF00005 ABC transporter KM389_25770 PF17820 PDZ domain KM389_25775 PF01471 Putative peptidoglycan binding domain KM389_25775 PF17820 PDZ domain KM389_25775 PF03572 Peptidase family S41 KM389_25780 PF02687 FtsX-like permease family KM389_25780 PF18075 FtsX extracellular domain KM389_25785 PF00005 ABC transporter KM389_25790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM389_25800 PF02810 SEC-C motif KM389_25800 PF07516 SecA Wing and Scaffold domain KM389_25800 PF01043 SecA preprotein cross-linking domain KM389_25800 PF07517 SecA DEAD-like domain KM389_25805 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KM389_25805 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KM389_25810 PF00313 'Cold-shock' DNA-binding domain KM389_25820 PF00271 Helicase conserved C-terminal domain KM389_25820 PF04851 Type III restriction enzyme, res subunit KM389_25825 PF00877 NlpC/P60 family KM389_25825 PF01476 LysM domain KM389_25830 PF01638 HxlR-like helix-turn-helix KM389_25835 PF02645 Uncharacterised protein, DegV family COG1307 KM389_25840 PF09186 Domain of unknown function (DUF1949) KM389_25840 PF01205 Uncharacterized protein family UPF0029 KM389_25845 PF03816 Cell envelope-related transcriptional attenuator domain KM389_25850 PF02350 UDP-N-acetylglucosamine 2-epimerase KM389_25855 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM389_25855 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM389_25855 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM389_25860 PF00953 Glycosyl transferase family 4 KM389_25865 PF01522 Polysaccharide deacetylase KM389_25870 PF00874 PRD domain KM389_25870 PF03610 PTS system fructose IIA component KM389_25870 PF00158 Sigma-54 interaction domain KM389_25880 PF02417 Chromate transporter KM389_25885 PF04794 YdjC-like protein KM389_25890 PF02056 Family 4 glycosyl hydrolase KM389_25890 PF11975 Family 4 glycosyl hydrolase C-terminal domain KM389_25895 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM389_25900 PF02378 Phosphotransferase system, EIIC KM389_25905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM389_25915 PF02675 S-adenosylmethionine decarboxylase KM389_25920 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM389_25925 PF02378 Phosphotransferase system, EIIC KM389_25930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM389_25935 PF00375 Sodium:dicarboxylate symporter family KM389_25945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM389_25955 PF03466 LysR substrate binding domain KM389_25955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM389_25975 PF01654 Cytochrome bd terminal oxidase subunit I KM389_25980 PF02322 Cytochrome bd terminal oxidase subunit II KM389_25985 PF02040 Arsenical pump membrane protein KM389_25990 PF13667 ThiC-associated domain KM389_25990 PF01964 Radical SAM ThiC family KM389_26005 PF09988 Uncharacterized metal-binding protein (DUF2227) KM389_26015 PF00884 Sulfatase KM389_26020 PF01063 Amino-transferase class IV KM389_26030 PF07662 Na+ dependent nucleoside transporter C-terminus KM389_26030 PF01773 Na+ dependent nucleoside transporter N-terminus KM389_26045 PF02028 BCCT, betaine/carnitine/choline family transporter KM389_26050 PF01476 LysM domain KM389_26050 PF06725 3D domain KM389_26075 PF04434 SWIM zinc finger KM389_26080 PF12419 SNF2 Helicase protein KM389_26080 PF00271 Helicase conserved C-terminal domain KM389_26080 PF00176 SNF2 family N-terminal domain KM389_26110 PF04545 Sigma-70, region 4 KM389_26110 PF04542 Sigma-70 region 2 KM389_26115 PF04893 Yip1 domain KM389_26120 PF12704 MacB-like periplasmic core domain KM389_26120 PF02687 FtsX-like permease family KM389_26125 PF00005 ABC transporter KM389_26145 PF07690 Major Facilitator Superfamily KM389_26160 PF00989 PAS fold KM389_26160 PF16736 Single Cache-like KM389_26160 PF00512 His Kinase A (phospho-acceptor) domain KM389_26160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_26165 PF00072 Response regulator receiver domain KM389_26165 PF00486 Transcriptional regulatory protein, C terminal KM389_26170 PF16363 GDP-mannose 4,6 dehydratase KM389_26175 PF03816 Cell envelope-related transcriptional attenuator domain KM389_26180 PF07977 FabA-like domain KM389_26185 PF02350 UDP-N-acetylglucosamine 2-epimerase KM389_26190 PF00005 ABC transporter KM389_26190 PF08239 Bacterial SH3 domain KM389_26195 PF01061 ABC-2 type transporter KM389_26200 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM389_26200 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM389_26200 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM389_26245 PF12116 Stage III sporulation protein D KM389_26260 PF01551 Peptidase family M23 KM389_26270 PF00005 ABC transporter KM389_26280 PF08486 Stage II sporulation protein KM389_26285 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM389_26295 PF06612 Protein of unknown function (DUF1146) KM389_26300 PF00361 Proton-conducting membrane transporter KM389_26305 PF00361 Proton-conducting membrane transporter KM389_26310 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus KM389_26310 PF00361 Proton-conducting membrane transporter KM389_26310 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM389_26315 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KM389_26320 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KM389_26330 PF00146 NADH dehydrogenase KM389_26335 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KM389_26340 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KM389_26345 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KM389_26350 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KM389_26355 PF03707 Bacterial signalling protein N terminal repeat KM389_26355 PF00990 Diguanylate cyclase, GGDEF domain KM389_26355 PF00563 EAL domain KM389_26370 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KM389_26370 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KM389_26375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM389_26375 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM389_26380 PF00231 ATP synthase KM389_26385 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM389_26385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM389_26385 PF00306 ATP synthase alpha/beta chain, C terminal domain KM389_26390 PF00213 ATP synthase delta (OSCP) subunit KM389_26395 PF00430 ATP synthase B/B' CF(0) KM389_26400 PF00137 ATP synthase subunit C KM389_26405 PF00119 ATP synthase A chain KM389_26410 PF03899 ATP synthase I chain KM389_26430 PF00464 Serine hydroxymethyltransferase KM389_26435 PF04260 Protein of unknown function (DUF436) KM389_26440 PF02502 Ribose/Galactose Isomerase KM389_26445 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM389_26450 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM389_26455 PF07681 DoxX KM389_26460 PF01613 Flavin reductase like domain KM389_26470 PF02659 Putative manganese efflux pump KM389_26475 PF03481 Putative GTP-binding controlling metal-binding KM389_26475 PF01300 Telomere recombination KM389_26485 PF09551 Stage II sporulation protein R (spore_II_R) KM389_26490 PF13847 Methyltransferase domain KM389_26490 PF17827 PrmC N-terminal domain KM389_26495 PF03462 PCRF domain KM389_26495 PF00472 RF-1 domain KM389_26500 PF00265 Thymidine kinase KM389_26505 PF01197 Ribosomal protein L31 KM389_26510 PF07498 Rho termination factor, N-terminal domain KM389_26510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM389_26510 PF07497 Rho termination factor, RNA-binding domain KM389_26515 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM389_26520 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM389_26525 PF01116 Fructose-bisphosphate aldolase class-II KM389_26530 PF00072 Response regulator receiver domain KM389_26535 PF10740 Domain of unknown function (DUF2529) KM389_26540 PF06418 CTP synthase N-terminus KM389_26540 PF00117 Glutamine amidotransferase class-I KM389_26545 PF05066 HB1, ASXL, restriction endonuclease HTH domain KM389_26555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM389_26555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM389_26555 PF02770 Acyl-CoA dehydrogenase, middle domain KM389_26560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM389_26560 PF02770 Acyl-CoA dehydrogenase, middle domain KM389_26560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM389_26565 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM389_26565 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM389_26570 PF00108 Thiolase, N-terminal domain KM389_26570 PF02803 Thiolase, C-terminal domain KM389_26575 PF13183 4Fe-4S dicluster domain KM389_26575 PF02754 Cysteine-rich domain KM389_26580 PF13091 PLD-like domain KM389_26585 PF03851 UV-endonuclease UvdE KM389_26590 PF03707 Bacterial signalling protein N terminal repeat KM389_26590 PF00563 EAL domain KM389_26590 PF00990 Diguanylate cyclase, GGDEF domain KM389_26610 PF00196 Bacterial regulatory proteins, luxR family KM389_26610 PF00072 Response regulator receiver domain KM389_26615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_26615 PF07730 Histidine kinase KM389_26625 PF00005 ABC transporter KM389_26630 PF00557 Metallopeptidase family M24 KM389_26640 PF02225 PA domain KM389_26640 PF04389 Peptidase family M28 KM389_26660 PF08281 Sigma-70, region 4 KM389_26660 PF04542 Sigma-70 region 2 KM389_26665 PF00750 tRNA synthetases class I (R) KM389_26665 PF05746 DALR anticodon binding domain KM389_26665 PF03485 Arginyl tRNA synthetase N terminal domain KM389_26670 PF09148 Domain of unknown function (DUF1934) KM389_26675 PF02016 LD-carboxypeptidase N-terminal domain KM389_26675 PF17676 LD-carboxypeptidase C-terminal domain KM389_26690 PF00491 Arginase family KM389_26695 PF17284 Spermidine synthase tetramerisation domain KM389_26700 PF07690 Major Facilitator Superfamily KM389_26705 PF13411 MerR HTH family regulatory protein KM389_26710 PF03009 Glycerophosphoryl diester phosphodiesterase family KM389_26715 PF00905 Penicillin binding protein transpeptidase domain KM389_26715 PF00912 Transglycosylase KM389_26720 PF08741 YwhD family KM389_26725 PF02163 Peptidase family M50 KM389_26730 PF01361 Tautomerase enzyme KM389_26735 PF01966 HD domain KM389_26740 PF01497 Periplasmic binding protein KM389_26745 PF00005 ABC transporter KM389_26750 PF01032 FecCD transport family KM389_26760 PF07293 Protein of unknown function (DUF1450) KM389_26775 PF03099 Biotin/lipoate A/B protein ligase family KM389_26780 PF01515 Phosphate acetyl/butaryl transferase KM389_26785 PF06778 Chlorite dismutase KM389_26790 PF00768 D-alanyl-D-alanine carboxypeptidase KM389_26790 PF07943 Penicillin-binding protein 5, C-terminal domain KM389_26795 PF07486 Cell Wall Hydrolase KM389_26800 PF09671 Spore coat protein (Spore_GerQ) KM389_26805 PF04241 Protein of unknown function (DUF423) KM389_26815 PF07885 Ion channel KM389_26815 PF02254 TrkA-N domain KM389_26820 PF00860 Permease family KM389_26830 PF12823 Domain of unknown function (DUF3817) KM389_26835 PF03167 Uracil DNA glycosylase superfamily KM389_26840 PF12679 ABC-2 family transporter protein KM389_26845 PF00005 ABC transporter KM389_26850 PF13472 GDSL-like Lipase/Acylhydrolase family KM389_26855 PF00356 Bacterial regulatory proteins, lacI family KM389_26855 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM389_26865 PF03447 Homoserine dehydrogenase, NAD binding domain KM389_26865 PF00742 Homoserine dehydrogenase KM389_26865 PF01842 ACT domain KM389_26870 PF04204 Homoserine O-succinyltransferase KM389_26875 PF01053 Cys/Met metabolism PLP-dependent enzyme KM389_26885 PF13419 Haloacid dehalogenase-like hydrolase KM389_26890 PF00027 Cyclic nucleotide-binding domain KM389_26895 PF02525 Flavodoxin-like fold KM389_26900 PF00196 Bacterial regulatory proteins, luxR family KM389_26900 PF00072 Response regulator receiver domain KM389_26910 PF08543 Phosphomethylpyrimidine kinase KM389_26915 PF07694 5TMR of 5TMR-LYT KM389_26915 PF00990 Diguanylate cyclase, GGDEF domain KM389_26920 PF04328 Selenoprotein, putative KM389_26925 PF02554 Carbon starvation protein CstA KM389_26925 PF13722 5TM C-terminal transporter carbon starvation CstA KM389_26930 PF00072 Response regulator receiver domain KM389_26930 PF04397 LytTr DNA-binding domain KM389_26935 PF07690 Major Facilitator Superfamily KM389_26940 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM389_26955 PF03458 UPF0126 domain KM389_26960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM389_26970 PF03061 Thioesterase superfamily KM389_26980 PF00535 Glycosyl transferase family 2 KM389_26985 PF12848 ABC transporter KM389_26985 PF00005 ABC transporter KM389_27005 PF00535 Glycosyl transferase family 2 KM389_27010 PF00440 Bacterial regulatory proteins, tetR family KM389_27015 PF00873 AcrB/AcrD/AcrF family KM389_27020 PF01641 SelR domain KM389_27020 PF01625 Peptide methionine sulfoxide reductase KM389_27025 PF01594 AI-2E family transporter KM389_27030 PF04172 LrgB-like family KM389_27035 PF03788 LrgA family KM389_27040 PF04397 LytTr DNA-binding domain KM389_27040 PF00072 Response regulator receiver domain KM389_27045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_27045 PF06580 Histidine kinase KM389_27045 PF07694 5TMR of 5TMR-LYT KM389_27045 PF13492 GAF domain KM389_27050 PF07690 Major Facilitator Superfamily KM389_27055 PF02028 BCCT, betaine/carnitine/choline family transporter KM389_27060 PF02898 Nitric oxide synthase, oxygenase domain KM389_27065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM389_27065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM389_27075 PF02293 AmiS/UreI family transporter KM389_27085 PF16363 GDP-mannose 4,6 dehydratase KM389_27090 PF03006 Haemolysin-III related KM389_27100 PF00271 Helicase conserved C-terminal domain KM389_27100 PF00270 DEAD/DEAH box helicase KM389_27100 PF03880 DbpA RNA binding domain KM389_27110 PF00478 IMP dehydrogenase / GMP reductase domain KM389_27115 PF08439 Oligopeptidase F KM389_27115 PF01432 Peptidase family M3 KM389_27125 PF02590 Predicted SPOUT methyltransferase KM389_27135 PF13180 PDZ domain KM389_27140 PF00753 Metallo-beta-lactamase superfamily KM389_27145 PF09648 YycH protein KM389_27150 PF07435 YycH protein KM389_27155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM389_27155 PF13426 PAS domain KM389_27155 PF00512 His Kinase A (phospho-acceptor) domain KM389_27155 PF00672 HAMP domain KM389_27160 PF00072 Response regulator receiver domain KM389_27160 PF00486 Transcriptional regulatory protein, C terminal KM389_27185 PF00709 Adenylosuccinate synthetase KM389_27190 PF03796 DnaB-like helicase C terminal domain KM389_27190 PF00772 DnaB-like helicase N terminal domain KM389_27195 PF03948 Ribosomal protein L9, C-terminal domain KM389_27195 PF01281 Ribosomal protein L9, N-terminal domain KM389_27200 PF01368 DHH family KM389_27200 PF02272 DHHA1 domain KM389_27205 PF09991 Predicted membrane protein (DUF2232) KM389_27210 PF01084 Ribosomal protein S18 KM389_27215 PF00436 Single-strand binding protein family KM389_27220 PF01250 Ribosomal protein S6 KM389_27225 PF01926 50S ribosome-binding GTPase KM389_27225 PF06071 Protein of unknown function (DUF933) KM389_27230 PF06107 Bacterial protein of unknown function (DUF951) KM389_27235 PF00924 Mechanosensitive ion channel KM389_27240 PF06866 Protein of unknown function (DUF1256) KM389_27245 PF02195 ParB-like nuclease domain KM389_27245 PF17762 HTH domain found in ParB protein KM389_27250 PF13614 AAA domain KM389_27255 PF02195 ParB-like nuclease domain KM389_27255 PF17762 HTH domain found in ParB protein KM389_27260 PF02527 rRNA small subunit methyltransferase G KM389_27265 PF01134 Glucose inhibited division protein A KM389_27265 PF13932 GidA associated domain KM389_27270 PF10396 GTP-binding protein TrmE N-terminus KM389_27270 PF12631 MnmE helical domain KM389_27270 PF01926 50S ribosome-binding GTPase KM389_27275 PF01424 R3H domain KM389_27275 PF14804 Jag N-terminus KM389_27280 PF02096 60Kd inner membrane protein KM389_27285 PF00825 Ribonuclease P KM389_27290 PF00468 Ribosomal protein L34 KM389_27300 PF08378 Nuclease-related domain KM389_27340 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM389_27420 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM389_27465 PF13427 Domain of unknown function (DUF4111) KM389_27465 PF18765 Polymerase beta, Nucleotidyltransferase KM389_27490 PF01609 Transposase DDE domain KM389_27495 PF01609 Transposase DDE domain KM389_27520 PF17854 FtsK alpha domain KM389_27520 PF09397 Ftsk gamma domain KM389_27520 PF01580 FtsK/SpoIIIE family KM389_27520 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KM389_27535 PF00091 Tubulin/FtsZ family, GTPase domain KM389_27610 PF00437 Type II/IV secretion system protein KM389_27730 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) KM389_27745 PF04235 Protein of unknown function (DUF418) KM389_27765 PF00395 S-layer homology domain KM389_27770 PF01569 PAP2 superfamily KM389_27785 PF00535 Glycosyl transferase family 2 KM389_27790 PF00483 Nucleotidyl transferase KM389_27835 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM389_27835 PF03497 Anthrax toxin LF subunit KM389_27855 PF08279 HTH domain KM389_27855 PF05043 Mga helix-turn-helix domain KM389_27855 PF00874 PRD domain KM389_27860 PF09385 Histidine kinase N terminal KM389_27875 PF01526 Tn3 transposase DDE domain KM389_27875 PF13700 Domain of unknown function (DUF4158) KM389_27880 PF02796 Helix-turn-helix domain of resolvase KM389_27880 PF00239 Resolvase, N terminal domain KM389_27885 PF03845 Spore germination protein KM389_27890 PF03323 Bacillus/Clostridium GerA spore germination protein KM389_27895 PF05504 Spore germination B3/ GerAC like, C-terminal KM389_27905 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain KM389_27905 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 KM389_27905 PF07691 PA14 domain KM389_27905 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 KM389_27910 PF01022 Bacterial regulatory protein, arsR family KM389_27935 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM389_27935 PF09156 Anthrax toxin lethal factor, middle domain KM389_27955 PF18277 AbrB C-terminal domain KM389_27955 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM389_27965 PF02899 Phage integrase, N-terminal SAM-like domain KM389_27965 PF00589 Phage integrase family KM389_27995 PF14436 Bacterial EndoU nuclease KM389_27995 PF04740 LXG domain of WXG superfamily KM389_28020 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM389_28030 PF00589 Phage integrase family KM389_28055 PF18801 response regulator aspartate phosphatase H, N terminal KM389_28065 PF17209 Hfq protein KM389_28070 PF01022 Bacterial regulatory protein, arsR family KM389_28075 PF02600 Disulfide bond formation protein DsbB KM389_28090 PF00565 Staphylococcal nuclease homologue KM389_28095 PF13342 C-terminal repeat of topoisomerase KM389_28095 PF01751 Toprim domain KM389_28095 PF01131 DNA topoisomerase KM389_28105 PF08708 Primase C terminal 1 (PriCT-1) KM389_28125 PF17362 Family of unknown function KM389_28140 PF17631 Family of unknown function (DUF5512) KM389_28180 PF00437 Type II/IV secretion system protein KM389_28210 PF04956 TrbC/VIRB2 family KM389_28225 PF12696 TraM recognition site of TraD and TraG KM389_28260 PF00877 NlpC/P60 family KM389_28270 PF17632 Family of unknown function (DUF5513) KM389_28295 PF17633 Family of unknown function (DUF5514) KM389_28300 PF17630 Family of unknown function (DUF5511) KM389_28305 PF18840 Large polyvalent protein associated domain 25 KM389_28320 PF13154 Protein of unknown function (DUF3991) KM389_28325 PF01131 DNA topoisomerase KM389_28325 PF01751 Toprim domain KM389_28365 PF17443 Uncharacterized protein pXO2-72 KM389_28385 PF11798 IMS family HHH motif KM389_28385 PF11799 impB/mucB/samB family C-terminal domain KM389_28385 PF00817 impB/mucB/samB family KM389_28390 PF13152 Protein of unknown function (DUF3967) KM389_28390 PF13411 MerR HTH family regulatory protein KM389_28395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM389_28425 PF00874 PRD domain KM389_28425 PF05043 Mga helix-turn-helix domain KM389_28425 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM389_28445 PF08279 HTH domain KM389_28445 PF05043 Mga helix-turn-helix domain KM389_28445 PF00874 PRD domain KM389_28450 PF09385 Histidine kinase N terminal KM389_28460 PF10502 Signal peptidase, peptidase S26 KM389_28475 PF01022 Bacterial regulatory protein, arsR family KM389_28485 PF08245 Mur ligase middle domain KM389_28490 PF14102 Capsule biosynthesis CapC KM389_28495 PF09587 Bacterial capsule synthesis protein PGA_cap KM389_28515 PF05043 Mga helix-turn-helix domain KM389_28515 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM389_28525 PF01569 PAP2 superfamily KM389_28535 PF00440 Bacterial regulatory proteins, tetR family KM389_28540 PF04463 Protein of unknown function (DUF523) KM389_28545 PF02517 CPBP intramembrane metalloprotease KM389_28550 PF01906 Putative heavy-metal-binding KM389_28565 PF00395 S-layer homology domain KM389_28565 PF01520 N-acetylmuramoyl-L-alanine amidase KM389_28580 PF13614 AAA domain