locus-tag class description KM397_00005 PF00308 Bacterial dnaA protein KM397_00005 PF08299 Bacterial dnaA protein helix-turn-helix KM397_00005 PF11638 DnaA N-terminal domain KM397_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KM397_00010 PF02767 DNA polymerase III beta subunit, central domain KM397_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KM397_00020 PF02463 RecF/RecN/SMC N terminal domain KM397_00025 PF01751 Toprim domain KM397_00025 PF00204 DNA gyrase B KM397_00025 PF00986 DNA gyrase B subunit, carboxyl terminus KM397_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller KM397_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A KM397_00060 PF14175 YaaC-like Protein KM397_00065 PF00478 IMP dehydrogenase / GMP reductase domain KM397_00065 PF00571 CBS domain KM397_00070 PF00768 D-alanyl-D-alanine carboxypeptidase KM397_00070 PF07943 Penicillin-binding protein 5, C-terminal domain KM397_00075 PF01680 SOR/SNZ family KM397_00080 PF01174 SNO glutamine amidotransferase family KM397_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM397_00085 PF02403 Seryl-tRNA synthetase N-terminal domain KM397_00100 PF01712 Deoxynucleoside kinase KM397_00105 PF01712 Deoxynucleoside kinase KM397_00110 PF00857 Isochorismatase family KM397_00115 PF14437 MafB19-like deaminase KM397_00125 PF12169 DNA polymerase III subunits gamma and tau domain III KM397_00130 PF02575 YbaB/EbfC DNA-binding family KM397_00135 PF13662 Toprim domain KM397_00135 PF02132 RecR protein KM397_00140 PF10704 Protein of unknown function (DUF2508) KM397_00145 PF07441 SigmaK-factor processing regulatory protein BofA KM397_00180 PF01276 Orn/Lys/Arg decarboxylase, major domain KM397_00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM397_00185 PF02223 Thymidylate kinase KM397_00190 PF09115 DNA polymerase III, delta subunit, C terminal KM397_00195 PF04468 PSP1 C-terminal conserved region KM397_00200 PF06156 Initiation control protein YabA KM397_00205 PF05175 Methyltransferase small domain KM397_00210 PF01541 GIY-YIG catalytic domain KM397_00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM397_00220 PF18277 AbrB C-terminal domain KM397_00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM397_00225 PF08264 Anticodon-binding domain of tRNA KM397_00225 PF09334 tRNA synthetases class I (M) KM397_00225 PF01588 Putative tRNA binding domain KM397_00230 PF01026 TatD related DNase KM397_00235 PF13331 Domain of unknown function (DUF4093) KM397_00235 PF13662 Toprim domain KM397_00240 PF00398 Ribosomal RNA adenine dimethylase KM397_00245 PF05582 YabG peptidase U57 KM397_00250 PF06257 Biofilm formation stimulator VEG KM397_00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM397_00260 PF00288 GHMP kinases N terminal domain KM397_00260 PF08544 GHMP kinases C terminal KM397_00265 PF09182 Bacterial purine repressor, N-terminal KM397_00265 PF00156 Phosphoribosyl transferase domain KM397_00270 PF01042 Endoribonuclease L-PSP KM397_00275 PF04026 SpoVG KM397_00280 PF00483 Nucleotidyl transferase KM397_00280 PF00132 Bacterial transferase hexapeptide (six repeats) KM397_00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KM397_00285 PF14572 Phosphoribosyl synthetase-associated domain KM397_00290 PF01195 Peptidyl-tRNA hydrolase KM397_00300 PF02559 CarD-like/TRCF domain KM397_00300 PF00270 DEAD/DEAH box helicase KM397_00300 PF03461 TRCF domain KM397_00300 PF17757 UvrB interaction domain KM397_00300 PF00271 Helicase conserved C-terminal domain KM397_00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM397_00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor KM397_00310 PF01943 Polysaccharide biosynthesis protein KM397_00310 PF14667 Polysaccharide biosynthesis C-terminal domain KM397_00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM397_00315 PF03819 MazG nucleotide pyrophosphohydrolase domain KM397_00320 PF01479 S4 domain KM397_00325 PF07873 YabP family KM397_00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) KM397_00340 PF00575 S1 RNA binding domain KM397_00355 PF07228 Stage II sporulation protein E (SpoIIE) KM397_00360 PF09179 TilS substrate binding domain KM397_00360 PF01171 PP-loop family KM397_00360 PF11734 TilS substrate C-terminal domain KM397_00365 PF00156 Phosphoribosyl transferase domain KM397_00370 PF17862 AAA+ lid domain KM397_00370 PF00004 ATPase family associated with various cellular activities (AAA) KM397_00370 PF01434 Peptidase family M41 KM397_00370 PF06480 FtsH Extracellular KM397_00375 PF03309 Type III pantothenate kinase KM397_00380 PF01430 Hsp33 protein KM397_00385 PF00291 Pyridoxal-phosphate dependent enzyme KM397_00390 PF04715 Anthranilate synthase component I, N terminal region KM397_00390 PF00425 chorismate binding enzyme KM397_00395 PF00117 Glutamine amidotransferase class-I KM397_00400 PF01063 Amino-transferase class IV KM397_00405 PF00809 Pterin binding enzyme KM397_00410 PF02152 Dihydroneopterin aldolase KM397_00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KM397_00420 PF01381 Helix-turn-helix KM397_00425 PF01207 Dihydrouridine synthase (Dus) KM397_00430 PF01336 OB-fold nucleic acid binding domain KM397_00430 PF00152 tRNA synthetases class II (D, K and N) KM397_00450 PF17727 CtsR C-terminal dimerization domain KM397_00450 PF05848 CtsR N-terminal HTH domain KM397_00455 PF02151 UvrB/uvrC motif KM397_00460 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KM397_00465 PF00004 ATPase family associated with various cellular activities (AAA) KM397_00465 PF17871 AAA lid domain KM397_00465 PF07724 AAA domain (Cdc48 subfamily) KM397_00465 PF02861 Clp amino terminal domain, pathogenicity island component KM397_00465 PF10431 C-terminal, D2-small domain, of ClpB protein KM397_00470 PF18073 Rubredoxin metal binding domain KM397_00475 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM397_00475 PF10635 DisA bacterial checkpoint controller linker region KM397_00485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KM397_00490 PF02542 YgbB family KM397_00495 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM397_00500 PF06426 Serine acetyltransferase, N-terminal KM397_00500 PF00132 Bacterial transferase hexapeptide (six repeats) KM397_00505 PF01406 tRNA synthetases class I (C) catalytic domain KM397_00505 PF09190 DALR domain KM397_00510 PF00636 Ribonuclease III domain KM397_00515 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM397_00515 PF00588 SpoU rRNA Methylase family KM397_00520 PF05991 YacP-like NYN domain KM397_00525 PF08281 Sigma-70, region 4 KM397_00525 PF04542 Sigma-70 region 2 KM397_00530 PF00471 Ribosomal protein L33 KM397_00535 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KM397_00540 PF00467 KOW motif KM397_00540 PF02357 Transcription termination factor nusG KM397_00545 PF03946 Ribosomal protein L11, N-terminal domain KM397_00545 PF00298 Ribosomal protein L11, RNA binding domain KM397_00550 PF00687 Ribosomal protein L1p/L10e family KM397_00555 PF00466 Ribosomal protein L10 KM397_00560 PF00542 Ribosomal protein L7/L12 C-terminal domain KM397_00560 PF16320 Ribosomal protein L7/L12 dimerisation domain KM397_00565 PF05175 Methyltransferase small domain KM397_00570 PF04561 RNA polymerase Rpb2, domain 2 KM397_00570 PF04565 RNA polymerase Rpb2, domain 3 KM397_00570 PF10385 RNA polymerase beta subunit external 1 domain KM397_00570 PF00562 RNA polymerase Rpb2, domain 6 KM397_00570 PF04560 RNA polymerase Rpb2, domain 7 KM397_00570 PF04563 RNA polymerase beta subunit KM397_00575 PF04997 RNA polymerase Rpb1, domain 1 KM397_00575 PF04998 RNA polymerase Rpb1, domain 5 KM397_00575 PF05000 RNA polymerase Rpb1, domain 4 KM397_00575 PF04983 RNA polymerase Rpb1, domain 3 KM397_00575 PF00623 RNA polymerase Rpb1, domain 2 KM397_00580 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM397_00585 PF00164 Ribosomal protein S12/S23 KM397_00590 PF00177 Ribosomal protein S7p/S5e KM397_00595 PF14492 Elongation Factor G, domain II KM397_00595 PF00679 Elongation factor G C-terminus KM397_00595 PF03764 Elongation factor G, domain IV KM397_00595 PF03144 Elongation factor Tu domain 2 KM397_00595 PF00009 Elongation factor Tu GTP binding domain KM397_00600 PF03143 Elongation factor Tu C-terminal domain KM397_00600 PF03144 Elongation factor Tu domain 2 KM397_00600 PF00009 Elongation factor Tu GTP binding domain KM397_00605 PF00338 Ribosomal protein S10p/S20e KM397_00610 PF00297 Ribosomal protein L3 KM397_00615 PF00573 Ribosomal protein L4/L1 family KM397_00620 PF00276 Ribosomal protein L23 KM397_00625 PF00181 Ribosomal Proteins L2, RNA binding domain KM397_00625 PF03947 Ribosomal Proteins L2, C-terminal domain KM397_00630 PF00203 Ribosomal protein S19 KM397_00635 PF00237 Ribosomal protein L22p/L17e KM397_00640 PF07650 KH domain KM397_00640 PF00189 Ribosomal protein S3, C-terminal domain KM397_00645 PF00252 Ribosomal protein L16p/L10e KM397_00650 PF00831 Ribosomal L29 protein KM397_00655 PF00366 Ribosomal protein S17 KM397_00660 PF00238 Ribosomal protein L14p/L23e KM397_00665 PF00467 KOW motif KM397_00665 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KM397_00670 PF00281 Ribosomal protein L5 KM397_00670 PF00673 ribosomal L5P family C-terminus KM397_00675 PF00253 Ribosomal protein S14p/S29e KM397_00680 PF00410 Ribosomal protein S8 KM397_00685 PF00347 Ribosomal protein L6 KM397_00690 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KM397_00695 PF03719 Ribosomal protein S5, C-terminal domain KM397_00695 PF00333 Ribosomal protein S5, N-terminal domain KM397_00700 PF00327 Ribosomal protein L30p/L7e KM397_00705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KM397_00710 PF00344 SecY translocase KM397_00715 PF05191 Adenylate kinase, active site lid KM397_00720 PF00557 Metallopeptidase family M24 KM397_00725 PF01176 Translation initiation factor 1A / IF-1 KM397_00730 PF00444 Ribosomal protein L36 KM397_00735 PF00416 Ribosomal protein S13/S18 KM397_00740 PF00411 Ribosomal protein S11 KM397_00745 PF01000 RNA polymerase Rpb3/RpoA insert domain KM397_00745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KM397_00745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KM397_00750 PF01196 Ribosomal protein L17 KM397_00755 PF00005 ABC transporter KM397_00760 PF00005 ABC transporter KM397_00765 PF02361 Cobalt transport protein KM397_00770 PF01416 tRNA pseudouridine synthase KM397_00775 PF00572 Ribosomal protein L13 KM397_00780 PF00380 Ribosomal protein S9/S16 KM397_00790 PF01520 N-acetylmuramoyl-L-alanine amidase KM397_00795 PF10609 NUBPL iron-transfer P-loop NTPase KM397_00800 PF17898 Spore germination GerD central core domain KM397_00805 PF14089 KinB-signalling pathway activation in sporulation KM397_00810 PF01522 Polysaccharide deacetylase KM397_00885 PF00491 Arginase family KM397_00890 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM397_00895 PF07949 YbbR-like protein KM397_00900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM397_00900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM397_00900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM397_00900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM397_00910 PF01380 SIS domain KM397_00915 PF00561 alpha/beta hydrolase fold KM397_00920 PF00392 Bacterial regulatory proteins, gntR family KM397_00920 PF07729 FCD domain KM397_00930 PF02447 GntP family permease KM397_00935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM397_00935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM397_00940 PF00326 Prolyl oligopeptidase family KM397_00940 PF07676 WD40-like Beta Propeller Repeat KM397_00975 PF00528 Binding-protein-dependent transport system inner membrane component KM397_00980 PF00005 ABC transporter KM397_00980 PF09383 NIL domain KM397_00985 PF03180 NLPA lipoprotein KM397_00990 PF00107 Zinc-binding dehydrogenase KM397_00990 PF08240 Alcohol dehydrogenase GroES-like domain KM397_01000 PF01565 FAD binding domain KM397_01005 PF07690 Major Facilitator Superfamily KM397_01015 PF07690 Major Facilitator Superfamily KM397_01030 PF00528 Binding-protein-dependent transport system inner membrane component KM397_01035 PF12911 N-terminal TM domain of oligopeptide transport permease C KM397_01035 PF00528 Binding-protein-dependent transport system inner membrane component KM397_01040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM397_01040 PF00005 ABC transporter KM397_01045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM397_01045 PF00005 ABC transporter KM397_01050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_01060 PF12833 Helix-turn-helix domain KM397_01075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_01080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_01085 PF00248 Aldo/keto reductase family KM397_01090 PF03807 NADP oxidoreductase coenzyme F420-dependent KM397_01090 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM397_01095 PF04973 Nicotinamide mononucleotide transporter KM397_01100 PF06800 Sugar transport protein KM397_01105 PF00528 Binding-protein-dependent transport system inner membrane component KM397_01115 PF12727 PBP superfamily domain KM397_01115 PF12728 Helix-turn-helix domain KM397_01125 PF03466 LysR substrate binding domain KM397_01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM397_01130 PF00892 EamA-like transporter family KM397_01135 PF14142 YrzO-like protein KM397_01145 PF01553 Acyltransferase KM397_01155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM397_01155 PF00356 Bacterial regulatory proteins, lacI family KM397_01165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM397_01165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM397_01175 PF01026 TatD related DNase KM397_01180 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KM397_01205 PF00005 ABC transporter KM397_01205 PF16326 ABC transporter C-terminal domain KM397_01205 PF12848 ABC transporter KM397_01220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_01225 PF00528 Binding-protein-dependent transport system inner membrane component KM397_01230 PF12911 N-terminal TM domain of oligopeptide transport permease C KM397_01230 PF00528 Binding-protein-dependent transport system inner membrane component KM397_01235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM397_01235 PF00005 ABC transporter KM397_01240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM397_01240 PF00005 ABC transporter KM397_01260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM397_01265 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM397_01275 PF07690 Major Facilitator Superfamily KM397_01285 PF02875 Mur ligase family, glutamate ligase domain KM397_01285 PF08245 Mur ligase middle domain KM397_01285 PF01225 Mur ligase family, catalytic domain KM397_01290 PF00271 Helicase conserved C-terminal domain KM397_01290 PF00270 DEAD/DEAH box helicase KM397_01295 PF03851 UV-endonuclease UvdE KM397_01300 PF01694 Rhomboid family KM397_01305 PF01648 4'-phosphopantetheinyl transferase superfamily KM397_01315 PF00842 Alanine racemase, C-terminal domain KM397_01315 PF01168 Alanine racemase, N-terminal domain KM397_01320 PF01402 Ribbon-helix-helix protein, copG family KM397_01325 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KM397_01330 PF17674 HHH domain KM397_01330 PF16921 Tex protein YqgF-like domain KM397_01330 PF09371 Tex-like protein N-terminal domain KM397_01330 PF00575 S1 RNA binding domain KM397_01340 PF10263 SprT-like family KM397_01340 PF17283 SprT-like zinc ribbon domain KM397_01425 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KM397_01430 PF00814 Glycoprotease family KM397_01435 PF00583 Acetyltransferase (GNAT) family KM397_01440 PF00814 Glycoprotease family KM397_01445 PF12848 ABC transporter KM397_01445 PF00005 ABC transporter KM397_01445 PF16326 ABC transporter C-terminal domain KM397_01450 PF06971 Putative DNA-binding protein N-terminus KM397_01450 PF02629 CoA binding domain KM397_01460 PF02517 CPBP intramembrane metalloprotease KM397_01465 PF00166 Chaperonin 10 Kd subunit KM397_01470 PF00118 TCP-1/cpn60 chaperonin family KM397_01475 PF00958 GMP synthase C terminal domain KM397_01475 PF02540 NAD synthase KM397_01475 PF00117 Glutamine amidotransferase class-I KM397_01480 PF00860 Permease family KM397_01485 PF00072 Response regulator receiver domain KM397_01485 PF00486 Transcriptional regulatory protein, C terminal KM397_01490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_01490 PF00512 His Kinase A (phospho-acceptor) domain KM397_01490 PF00989 PAS fold KM397_01490 PF16736 Single Cache-like KM397_01520 PF08241 Methyltransferase domain KM397_01560 PF02673 Bacitracin resistance protein BacA KM397_01570 PF00005 ABC transporter KM397_01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_01575 PF00512 His Kinase A (phospho-acceptor) domain KM397_01580 PF00072 Response regulator receiver domain KM397_01580 PF00486 Transcriptional regulatory protein, C terminal KM397_01600 PF00731 AIR carboxylase KM397_01605 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KM397_01605 PF02222 ATP-grasp domain KM397_01610 PF00206 Lyase KM397_01610 PF10397 Adenylosuccinate lyase C-terminus KM397_01615 PF01259 SAICAR synthetase KM397_01620 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KM397_01630 PF00586 AIR synthase related protein, N-terminal domain KM397_01630 PF02769 AIR synthase related protein, C-terminal domain KM397_01630 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KM397_01635 PF00156 Phosphoribosyl transferase domain KM397_01640 PF00586 AIR synthase related protein, N-terminal domain KM397_01640 PF02769 AIR synthase related protein, C-terminal domain KM397_01645 PF00551 Formyl transferase KM397_01650 PF01808 AICARFT/IMPCHase bienzyme KM397_01650 PF02142 MGS-like domain KM397_01655 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KM397_01655 PF02843 Phosphoribosylglycinamide synthetase, C domain KM397_01655 PF02844 Phosphoribosylglycinamide synthetase, N domain KM397_01675 PF01884 PcrB family KM397_01680 PF13361 UvrD-like helicase C-terminal domain KM397_01680 PF00580 UvrD/REP helicase N-terminal domain KM397_01685 PF00533 BRCA1 C Terminus (BRCT) domain KM397_01685 PF01653 NAD-dependent DNA ligase adenylation domain KM397_01685 PF03120 NAD-dependent DNA ligase OB-fold domain KM397_01685 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KM397_01685 PF12826 Helix-hairpin-helix motif KM397_01690 PF07537 CamS sex pheromone cAM373 precursor KM397_01695 PF01925 Sulfite exporter TauE/SafE KM397_01700 PF00171 Aldehyde dehydrogenase family KM397_01710 PF00857 Isochorismatase family KM397_01715 PF09383 NIL domain KM397_01715 PF00005 ABC transporter KM397_01720 PF00528 Binding-protein-dependent transport system inner membrane component KM397_01725 PF03180 NLPA lipoprotein KM397_01745 PF01047 MarR family KM397_01755 PF02686 Glu-tRNAGln amidotransferase C subunit KM397_01760 PF01425 Amidase KM397_01765 PF02934 GatB/GatE catalytic domain KM397_01765 PF02637 GatB domain KM397_01770 PF00781 Diacylglycerol kinase catalytic domain KM397_01775 PF13419 Haloacid dehalogenase-like hydrolase KM397_01780 PF00202 Aminotransferase class-III KM397_01785 PF00158 Sigma-54 interaction domain KM397_01790 PF00171 Aldehyde dehydrogenase family KM397_01795 PF00893 Small Multidrug Resistance protein KM397_01800 PF02073 Thermophilic metalloprotease (M29) KM397_01815 PF01773 Na+ dependent nucleoside transporter N-terminus KM397_01815 PF07670 Nucleoside recognition KM397_01815 PF07662 Na+ dependent nucleoside transporter C-terminus KM397_01820 PF05958 tRNA (Uracil-5-)-methyltransferase KM397_01820 PF02475 Met-10+ like-protein KM397_01820 PF01938 TRAM domain KM397_01825 PF01207 Dihydrouridine synthase (Dus) KM397_01835 PF07308 Protein of unknown function (DUF1456) KM397_01850 PF13378 Enolase C-terminal domain-like KM397_01850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM397_01860 PF03553 Na+/H+ antiporter family KM397_01865 PF07687 Peptidase dimerisation domain KM397_01865 PF01546 Peptidase family M20/M25/M40 KM397_01875 PF13192 Thioredoxin domain KM397_01875 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM397_01880 PF00578 AhpC/TSA family KM397_01885 PF01636 Phosphotransferase enzyme family KM397_01890 PF01008 Initiation factor 2 subunit family KM397_01895 PF00596 Class II Aldolase and Adducin N-terminal domain KM397_01900 PF01032 FecCD transport family KM397_01905 PF01032 FecCD transport family KM397_01910 PF01497 Periplasmic binding protein KM397_01915 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM397_01925 PF12728 Helix-turn-helix domain KM397_01960 PF00989 PAS fold KM397_01960 PF00512 His Kinase A (phospho-acceptor) domain KM397_01960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_01960 PF13426 PAS domain KM397_01960 PF13188 PAS domain KM397_01980 PF10127 RNA repair pathway DNA polymerase beta family KM397_01985 PF07690 Major Facilitator Superfamily KM397_01990 PF01266 FAD dependent oxidoreductase KM397_01990 PF00355 Rieske [2Fe-2S] domain KM397_02000 PF00528 Binding-protein-dependent transport system inner membrane component KM397_02005 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM397_02010 PF00005 ABC transporter KM397_02015 PF12729 Four helix bundle sensory module for signal transduction KM397_02015 PF00672 HAMP domain KM397_02015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM397_02020 PF12729 Four helix bundle sensory module for signal transduction KM397_02020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM397_02020 PF00672 HAMP domain KM397_02025 PF16657 Maltogenic Amylase, C-terminal domain KM397_02025 PF00128 Alpha amylase, catalytic domain KM397_02030 PF02378 Phosphotransferase system, EIIC KM397_02030 PF00367 phosphotransferase system, EIIB KM397_02030 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM397_02035 PF03372 Endonuclease/Exonuclease/phosphatase family KM397_02040 PF01061 ABC-2 type transporter KM397_02045 PF01751 Toprim domain KM397_02045 PF01131 DNA topoisomerase KM397_02050 PF02110 Hydroxyethylthiazole kinase family KM397_02055 PF02581 Thiamine monophosphate synthase KM397_02060 PF03605 Anaerobic c4-dicarboxylate membrane transporter KM397_02065 PF00672 HAMP domain KM397_02065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM397_02070 PF01910 Thiamine-binding protein KM397_02075 PF00528 Binding-protein-dependent transport system inner membrane component KM397_02085 PF00005 ABC transporter KM397_02090 PF12848 ABC transporter KM397_02090 PF00005 ABC transporter KM397_02095 PF00041 Fibronectin type III domain KM397_02095 PF00704 Glycosyl hydrolases family 18 KM397_02115 PF08360 QacR-like protein, C-terminal region KM397_02115 PF00440 Bacterial regulatory proteins, tetR family KM397_02135 PF11700 Vacuole effluxer Atg22 like KM397_02150 PF09180 Prolyl-tRNA synthetase, C-terminal KM397_02150 PF03129 Anticodon binding domain KM397_02150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM397_02160 PF00480 ROK family KM397_02165 PF02342 TerD domain KM397_02170 PF02342 TerD domain KM397_02175 PF02342 TerD domain KM397_02180 PF03741 Integral membrane protein TerC family KM397_02185 PF14266 Putative component of 'biosynthetic module' KM397_02190 PF05816 Toxic anion resistance protein (TelA) KM397_02195 PF00689 Cation transporting ATPase, C-terminus KM397_02195 PF00690 Cation transporter/ATPase, N-terminus KM397_02200 PF06569 Protein of unknown function (DUF1128) KM397_02205 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM397_02215 PF03631 Virulence factor BrkB KM397_02225 PF00892 EamA-like transporter family KM397_02245 PF09335 SNARE associated Golgi protein KM397_02260 PF16242 Pyridoxamine 5'-phosphate oxidase like KM397_02265 PF01699 Sodium/calcium exchanger protein KM397_02270 PF14167 YfkD-like protein KM397_02275 PF08756 YfkB-like domain KM397_02275 PF04055 Radical SAM superfamily KM397_02285 PF05683 Fumarase C-terminus KM397_02285 PF05681 Fumarate hydratase (Fumerase) KM397_02290 PF01522 Polysaccharide deacetylase KM397_02300 PF00730 HhH-GPD superfamily base excision DNA repair protein KM397_02305 PF01938 TRAM domain KM397_02305 PF05958 tRNA (Uracil-5-)-methyltransferase KM397_02310 PF14659 Phage integrase, N-terminal SAM-like domain KM397_02310 PF00589 Phage integrase family KM397_02320 PF01381 Helix-turn-helix KM397_02335 PF01381 Helix-turn-helix KM397_02370 PF07319 Primosomal protein DnaI N-terminus KM397_02370 PF01695 IstB-like ATP binding protein KM397_02590 PF01183 Glycosyl hydrolases family 25 KM397_02600 PF01416 tRNA pseudouridine synthase KM397_02610 PF02954 Bacterial regulatory protein, Fis family KM397_02610 PF00158 Sigma-54 interaction domain KM397_02610 PF13426 PAS domain KM397_02620 PF00324 Amino acid permease KM397_02625 PF01546 Peptidase family M20/M25/M40 KM397_02625 PF07687 Peptidase dimerisation domain KM397_02650 PF04960 Glutaminase KM397_02655 PF02378 Phosphotransferase system, EIIC KM397_02655 PF00367 phosphotransferase system, EIIB KM397_02660 PF00144 Beta-lactamase KM397_02675 PF00535 Glycosyl transferase family 2 KM397_02680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM397_02680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM397_02680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM397_02685 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM397_02685 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM397_02685 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM397_02690 PF02911 Formyl transferase, C-terminal domain KM397_02690 PF01370 NAD dependent epimerase/dehydratase family KM397_02690 PF00551 Formyl transferase KM397_02695 PF00535 Glycosyl transferase family 2 KM397_02705 PF01228 Glycine radical KM397_02705 PF02901 Pyruvate formate lyase-like KM397_02710 PF04055 Radical SAM superfamily KM397_02715 PF04101 Glycosyltransferase family 28 C-terminal domain KM397_02715 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KM397_02730 PF01979 Amidohydrolase family KM397_02735 PF08338 Domain of unknown function (DUF1731) KM397_02735 PF01370 NAD dependent epimerase/dehydratase family KM397_02740 PF02631 RecX family KM397_02755 PF08176 Small acid-soluble spore protein K family KM397_02760 PF14043 WVELL protein KM397_02765 PF04307 LexA-binding, inner membrane-associated putative hydrolase KM397_02770 PF00730 HhH-GPD superfamily base excision DNA repair protein KM397_02770 PF14815 NUDIX domain KM397_02780 PF04259 Small, acid-soluble spore protein, gamma-type KM397_02785 PF14182 YgaB-like protein KM397_02790 PF04167 Protein of unknown function (DUF402) KM397_02795 PF00664 ABC transporter transmembrane region KM397_02795 PF00005 ABC transporter KM397_02800 PF06081 Aromatic acid exporter family member 1 KM397_02805 PF00310 Glutamine amidotransferases class-II KM397_02805 PF04898 Glutamate synthase central domain KM397_02805 PF01493 GXGXG motif KM397_02805 PF01645 Conserved region in glutamate synthase KM397_02810 PF00202 Aminotransferase class-III KM397_02815 PF00005 ABC transporter KM397_02830 PF07885 Ion channel KM397_02835 PF00578 AhpC/TSA family KM397_02840 PF01475 Ferric uptake regulator family KM397_02845 PF11023 Zinc-ribbon containing domain KM397_02945 PF01709 Transcriptional regulator KM397_02950 PF13344 Haloacid dehalogenase-like hydrolase KM397_02950 PF00293 NUDIX domain KM397_02955 PF00912 Transglycosylase KM397_02955 PF00905 Penicillin binding protein transpeptidase domain KM397_02960 PF13462 Thioredoxin KM397_02970 PF08331 Domain of unknown function (DUF1730) KM397_02975 PF12671 Putative amidase domain KM397_02980 PF00588 SpoU rRNA Methylase family KM397_02985 PF03707 Bacterial signalling protein N terminal repeat KM397_02985 PF00990 Diguanylate cyclase, GGDEF domain KM397_02985 PF00563 EAL domain KM397_02990 PF06798 PrkA serine protein kinase C-terminal domain KM397_02990 PF08298 PrkA AAA domain KM397_02995 PF04285 Protein of unknown function (DUF444) KM397_03010 PF02028 BCCT, betaine/carnitine/choline family transporter KM397_03015 PF08453 Peptidase family M9 N-terminal KM397_03015 PF01752 Collagenase KM397_03015 PF18496 Collagenase G catalytic helper subdomain KM397_03025 PF15975 Flotillin KM397_03025 PF01145 SPFH domain / Band 7 family KM397_03030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM397_03030 PF00672 HAMP domain KM397_03030 PF02743 Cache domain KM397_03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_03035 PF00989 PAS fold KM397_03035 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM397_03035 PF17203 Single cache domain 3 KM397_03045 PF03600 Citrate transporter KM397_03065 PF04309 Glycerol-3-phosphate responsive antiterminator KM397_03070 PF17912 MalK OB fold domain KM397_03070 PF00005 ABC transporter KM397_03075 PF00528 Binding-protein-dependent transport system inner membrane component KM397_03080 PF00528 Binding-protein-dependent transport system inner membrane component KM397_03085 PF13416 Bacterial extracellular solute-binding protein KM397_03090 PF00149 Calcineurin-like phosphoesterase KM397_03095 PF00072 Response regulator receiver domain KM397_03095 PF00486 Transcriptional regulatory protein, C terminal KM397_03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_03100 PF00512 His Kinase A (phospho-acceptor) domain KM397_03110 PF13529 Peptidase_C39 like family KM397_03115 PF02743 Cache domain KM397_03115 PF00672 HAMP domain KM397_03115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM397_03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_03120 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM397_03120 PF17203 Single cache domain 3 KM397_03120 PF00989 PAS fold KM397_03125 PF00072 Response regulator receiver domain KM397_03130 PF03390 2-hydroxycarboxylate transporter family KM397_03135 PF03949 Malic enzyme, NAD binding domain KM397_03135 PF00390 Malic enzyme, N-terminal domain KM397_03145 PF00892 EamA-like transporter family KM397_03150 PF00392 Bacterial regulatory proteins, gntR family KM397_03150 PF00155 Aminotransferase class I and II KM397_03160 PF00512 His Kinase A (phospho-acceptor) domain KM397_03160 PF00672 HAMP domain KM397_03160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_03160 PF00989 PAS fold KM397_03160 PF18698 Histidine kinase sensor domain KM397_03165 PF00486 Transcriptional regulatory protein, C terminal KM397_03165 PF00072 Response regulator receiver domain KM397_03170 PF13508 Acetyltransferase (GNAT) domain KM397_03170 PF00583 Acetyltransferase (GNAT) family KM397_03175 PF02634 FdhD/NarQ family KM397_03180 PF00384 Molybdopterin oxidoreductase KM397_03180 PF01568 Molydopterin dinucleotide binding domain KM397_03180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM397_03180 PF00037 4Fe-4S binding domain KM397_03180 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM397_03185 PF07849 Protein of unknown function (DUF1641) KM397_03195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM397_03195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM397_03200 PF13520 Amino acid permease KM397_03205 PF01022 Bacterial regulatory protein, arsR family KM397_03210 PF00403 Heavy-metal-associated domain KM397_03215 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KM397_03215 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KM397_03215 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KM397_03230 PF01447 Thermolysin metallopeptidase, catalytic domain KM397_03230 PF03413 Peptidase propeptide and YPEB domain KM397_03230 PF07504 Fungalysin/Thermolysin Propeptide Motif KM397_03230 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM397_03250 PF04294 VanW like protein KM397_03255 PF03816 Cell envelope-related transcriptional attenuator domain KM397_03260 PF07662 Na+ dependent nucleoside transporter C-terminus KM397_03260 PF01773 Na+ dependent nucleoside transporter N-terminus KM397_03265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM397_03270 PF01595 Cyclin M transmembrane N-terminal domain KM397_03270 PF00571 CBS domain KM397_03270 PF03471 Transporter associated domain KM397_03275 PF00206 Lyase KM397_03275 PF10415 Fumarase C C-terminus KM397_03280 PF02652 L-lactate permease KM397_03285 PF01022 Bacterial regulatory protein, arsR family KM397_03290 PF08141 Small acid-soluble spore protein H family KM397_03295 PF00854 POT family KM397_03300 PF01497 Periplasmic binding protein KM397_03305 PF01032 FecCD transport family KM397_03310 PF01032 FecCD transport family KM397_03315 PF00005 ABC transporter KM397_03320 PF08241 Methyltransferase domain KM397_03325 PF00155 Aminotransferase class I and II KM397_03330 PF01370 NAD dependent epimerase/dehydratase family KM397_03335 PF00293 NUDIX domain KM397_03335 PF13344 Haloacid dehalogenase-like hydrolase KM397_03340 PF00092 von Willebrand factor type A domain KM397_03345 PF07728 AAA domain (dynein-related subfamily) KM397_03350 PF13396 Phospholipase_D-nuclease N-terminal KM397_03350 PF13091 PLD-like domain KM397_03365 PF00563 EAL domain KM397_03365 PF03707 Bacterial signalling protein N terminal repeat KM397_03365 PF00990 Diguanylate cyclase, GGDEF domain KM397_03370 PF13520 Amino acid permease KM397_03375 PF00392 Bacterial regulatory proteins, gntR family KM397_03375 PF07702 UTRA domain KM397_03380 PF00367 phosphotransferase system, EIIB KM397_03380 PF02378 Phosphotransferase system, EIIC KM397_03385 PF00128 Alpha amylase, catalytic domain KM397_03385 PF16657 Maltogenic Amylase, C-terminal domain KM397_03400 PF03323 Bacillus/Clostridium GerA spore germination protein KM397_03410 PF01636 Phosphotransferase enzyme family KM397_03415 PF01235 Sodium:alanine symporter family KM397_03420 PF00005 ABC transporter KM397_03425 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM397_03430 PF00528 Binding-protein-dependent transport system inner membrane component KM397_03435 PF00528 Binding-protein-dependent transport system inner membrane component KM397_03440 PF00324 Amino acid permease KM397_03465 PF08279 HTH domain KM397_03465 PF13280 WYL domain KM397_03470 PF01872 RibD C-terminal domain KM397_03475 PF00989 PAS fold KM397_03475 PF00512 His Kinase A (phospho-acceptor) domain KM397_03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_03475 PF00672 HAMP domain KM397_03475 PF18698 Histidine kinase sensor domain KM397_03480 PF00072 Response regulator receiver domain KM397_03480 PF00486 Transcriptional regulatory protein, C terminal KM397_03490 PF00916 Sulfate permease family KM397_03490 PF01740 STAS domain KM397_03495 PF00582 Universal stress protein family KM397_03505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_03510 PF00528 Binding-protein-dependent transport system inner membrane component KM397_03515 PF00528 Binding-protein-dependent transport system inner membrane component KM397_03520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM397_03520 PF00005 ABC transporter KM397_03525 PF00005 ABC transporter KM397_03525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM397_03530 PF07690 Major Facilitator Superfamily KM397_03535 PF01047 MarR family KM397_03545 PF00356 Bacterial regulatory proteins, lacI family KM397_03550 PF00294 pfkB family carbohydrate kinase KM397_03555 PF05025 RbsD / FucU transport protein family KM397_03560 PF00005 ABC transporter KM397_03565 PF02653 Branched-chain amino acid transport system / permease component KM397_03570 PF13407 Periplasmic binding protein domain KM397_03575 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM397_03580 PF05547 Immune inhibitor A peptidase M6 KM397_03595 PF00107 Zinc-binding dehydrogenase KM397_03595 PF08240 Alcohol dehydrogenase GroES-like domain KM397_03605 PF00882 Zinc dependent phospholipase C KM397_03610 PF03372 Endonuclease/Exonuclease/phosphatase family KM397_03635 PF02673 Bacitracin resistance protein BacA KM397_03640 PF02743 Cache domain KM397_03640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM397_03640 PF00672 HAMP domain KM397_03645 PF01476 LysM domain KM397_03645 PF06725 3D domain KM397_03650 PF01381 Helix-turn-helix KM397_03660 PF04203 Sortase domain KM397_03665 PF00854 POT family KM397_03670 PF05525 Branched-chain amino acid transport protein KM397_03685 PF00324 Amino acid permease KM397_03690 PF00860 Permease family KM397_03715 PF02254 TrkA-N domain KM397_03715 PF00999 Sodium/hydrogen exchanger family KM397_03715 PF02080 TrkA-C domain KM397_03725 PF00510 Cytochrome c oxidase subunit III KM397_03730 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM397_03735 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM397_03740 PF13529 Peptidase_C39 like family KM397_03745 PF01546 Peptidase family M20/M25/M40 KM397_03745 PF07687 Peptidase dimerisation domain KM397_03750 PF11755 Protein of unknown function (DUF3311) KM397_03755 PF00474 Sodium:solute symporter family KM397_03760 PF03323 Bacillus/Clostridium GerA spore germination protein KM397_03765 PF03845 Spore germination protein KM397_03770 PF05504 Spore germination B3/ GerAC like, C-terminal KM397_03775 PF02421 Ferrous iron transport protein B KM397_03775 PF17910 FeoB cytosolic helical domain KM397_03775 PF07670 Nucleoside recognition KM397_03775 PF07664 Ferrous iron transport protein B C terminus KM397_03780 PF07670 Nucleoside recognition KM397_03780 PF02421 Ferrous iron transport protein B KM397_03780 PF17910 FeoB cytosolic helical domain KM397_03780 PF07664 Ferrous iron transport protein B C terminus KM397_03785 PF07670 Nucleoside recognition KM397_03785 PF17910 FeoB cytosolic helical domain KM397_03785 PF04023 FeoA domain KM397_03785 PF07664 Ferrous iron transport protein B C terminus KM397_03785 PF02421 Ferrous iron transport protein B KM397_03790 PF12849 PBP superfamily domain KM397_03795 PF00528 Binding-protein-dependent transport system inner membrane component KM397_03800 PF00528 Binding-protein-dependent transport system inner membrane component KM397_03810 PF00873 AcrB/AcrD/AcrF family KM397_03925 PF00571 CBS domain KM397_03940 PF00246 Zinc carboxypeptidase KM397_03940 PF08239 Bacterial SH3 domain KM397_03945 PF03070 TENA/THI-4/PQQC family KM397_03950 PF00005 ABC transporter KM397_03955 PF00528 Binding-protein-dependent transport system inner membrane component KM397_03960 PF09084 NMT1/THI5 like KM397_03965 PF02581 Thiamine monophosphate synthase KM397_03970 PF01266 FAD dependent oxidoreductase KM397_03975 PF02597 ThiS family KM397_03980 PF05690 Thiazole biosynthesis protein ThiG KM397_03985 PF00899 ThiF family KM397_03990 PF08543 Phosphomethylpyrimidine kinase KM397_04015 PF03814 Potassium-transporting ATPase A subunit KM397_04025 PF02669 K+-transporting ATPase, c chain KM397_04030 PF02702 Osmosensitive K+ channel His kinase sensor domain KM397_04035 PF07690 Major Facilitator Superfamily KM397_04040 PF01047 MarR family KM397_04055 PF00860 Permease family KM397_04075 PF00294 pfkB family carbohydrate kinase KM397_04080 PF08244 Glycosyl hydrolases family 32 C terminal KM397_04080 PF00251 Glycosyl hydrolases family 32 N-terminal domain KM397_04085 PF00367 phosphotransferase system, EIIB KM397_04085 PF02378 Phosphotransferase system, EIIC KM397_04090 PF00356 Bacterial regulatory proteins, lacI family KM397_04090 PF13407 Periplasmic binding protein domain KM397_04100 PF00085 Thioredoxin KM397_04105 PF02600 Disulfide bond formation protein DsbB KM397_04110 PF14148 YhdB-like protein KM397_04130 PF03323 Bacillus/Clostridium GerA spore germination protein KM397_04140 PF00881 Nitroreductase family KM397_04145 PF04293 SpoVR like protein KM397_04170 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM397_04170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM397_04175 PF02583 Metal-sensitive transcriptional repressor KM397_04180 PF01206 Sulfurtransferase TusA KM397_04180 PF00581 Rhodanese-like domain KM397_04185 PF00581 Rhodanese-like domain KM397_04185 PF00753 Metallo-beta-lactamase superfamily KM397_04190 PF01206 Sulfurtransferase TusA KM397_04195 PF00581 Rhodanese-like domain KM397_04205 PF13686 DsrE/DsrF/DrsH-like family KM397_04210 PF01925 Sulfite exporter TauE/SafE KM397_04220 PF03816 Cell envelope-related transcriptional attenuator domain KM397_04225 PF08240 Alcohol dehydrogenase GroES-like domain KM397_04225 PF00107 Zinc-binding dehydrogenase KM397_04230 PF02690 Na+/Pi-cotransporter KM397_04235 PF07690 Major Facilitator Superfamily KM397_04245 PF05043 Mga helix-turn-helix domain KM397_04245 PF00874 PRD domain KM397_04245 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM397_04245 PF08279 HTH domain KM397_04250 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM397_04255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM397_04260 PF02378 Phosphotransferase system, EIIC KM397_04275 PF01476 LysM domain KM397_04275 PF06725 3D domain KM397_04280 PF02687 FtsX-like permease family KM397_04280 PF12704 MacB-like periplasmic core domain KM397_04285 PF00005 ABC transporter KM397_04295 PF09529 Integral membrane protein (intg_mem_TP0381) KM397_04310 PF05525 Branched-chain amino acid transport protein KM397_04315 PF05067 Manganese containing catalase KM397_04320 PF12652 CotJB protein KM397_04325 PF11007 Spore coat associated protein JA (CotJA) KM397_04340 PF02735 Ku70/Ku80 beta-barrel domain KM397_04350 PF09335 SNARE associated Golgi protein KM397_04385 PF13520 Amino acid permease KM397_04390 PF00999 Sodium/hydrogen exchanger family KM397_04400 PF01380 SIS domain KM397_04400 PF01418 Helix-turn-helix domain, rpiR family KM397_04405 PF01380 SIS domain KM397_04410 PF00367 phosphotransferase system, EIIB KM397_04410 PF02378 Phosphotransferase system, EIIC KM397_04420 PF07681 DoxX KM397_04435 PF00892 EamA-like transporter family KM397_04440 PF01037 Lrp/AsnC ligand binding domain KM397_04450 PF00893 Small Multidrug Resistance protein KM397_04455 PF00893 Small Multidrug Resistance protein KM397_04460 PF17934 Tetracyclin repressor-like, C-terminal domain KM397_04460 PF00440 Bacterial regulatory proteins, tetR family KM397_04465 PF07690 Major Facilitator Superfamily KM397_04470 PF01638 HxlR-like helix-turn-helix KM397_04480 PF02525 Flavodoxin-like fold KM397_04485 PF12793 Sugar transport-related sRNA regulator N-term KM397_04485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_04490 PF07690 Major Facilitator Superfamily KM397_04500 PF01965 DJ-1/PfpI family KM397_04505 PF00199 Catalase KM397_04505 PF06628 Catalase-related immune-responsive KM397_04505 PF18011 C-terminal domain found in long catalases KM397_04515 PF13520 Amino acid permease KM397_04520 PF01177 Asp/Glu/Hydantoin racemase KM397_04530 PF00171 Aldehyde dehydrogenase family KM397_04535 PF00664 ABC transporter transmembrane region KM397_04535 PF00005 ABC transporter KM397_04545 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM397_04550 PF00528 Binding-protein-dependent transport system inner membrane component KM397_04555 PF00005 ABC transporter KM397_04560 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM397_04570 PF14398 YheC/D like ATP-grasp KM397_04580 PF04286 Protein of unknown function (DUF445) KM397_04585 PF06133 Control of competence regulator ComK, YlbF/YmcA KM397_04600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM397_04600 PF00205 Thiamine pyrophosphate enzyme, central domain KM397_04600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM397_04605 PF03306 Alpha-acetolactate decarboxylase KM397_04615 PF02245 Methylpurine-DNA glycosylase (MPG) KM397_04635 PF04055 Radical SAM superfamily KM397_04640 PF00501 AMP-binding enzyme KM397_04640 PF13193 AMP-binding enzyme C-terminal domain KM397_04650 PF01740 STAS domain KM397_04650 PF00916 Sulfate permease family KM397_04670 PF07517 SecA DEAD-like domain KM397_04670 PF01043 SecA preprotein cross-linking domain KM397_04670 PF07516 SecA Wing and Scaffold domain KM397_04675 PF01943 Polysaccharide biosynthesis protein KM397_04675 PF14667 Polysaccharide biosynthesis C-terminal domain KM397_04685 PF00395 S-layer homology domain KM397_04685 PF02368 Bacterial Ig-like domain (group 2) KM397_04685 PF13205 Bacterial Ig-like domain KM397_04690 PF00395 S-layer homology domain KM397_04700 PF03062 MBOAT, membrane-bound O-acyltransferase family KM397_04705 PF03062 MBOAT, membrane-bound O-acyltransferase family KM397_04720 PF00378 Enoyl-CoA hydratase/isomerase KM397_04740 PF05343 M42 glutamyl aminopeptidase KM397_04745 PF01520 N-acetylmuramoyl-L-alanine amidase KM397_04745 PF00395 S-layer homology domain KM397_04760 PF05544 Proline racemase KM397_04765 PF02423 Ornithine cyclodeaminase/mu-crystallin family KM397_04795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_04800 PF00528 Binding-protein-dependent transport system inner membrane component KM397_04805 PF12911 N-terminal TM domain of oligopeptide transport permease C KM397_04805 PF00528 Binding-protein-dependent transport system inner membrane component KM397_04815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM397_04815 PF00005 ABC transporter KM397_04820 PF01541 GIY-YIG catalytic domain KM397_04850 PF00083 Sugar (and other) transporter KM397_04855 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM397_04855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_04860 PF00072 Response regulator receiver domain KM397_04860 PF08279 HTH domain KM397_04860 PF12431 Transcriptional regulator KM397_04865 PF03401 Tripartite tricarboxylate transporter family receptor KM397_04870 PF02342 TerD domain KM397_04895 PF13411 MerR HTH family regulatory protein KM397_04895 PF06445 GyrI-like small molecule binding domain KM397_04910 PF03796 DnaB-like helicase C terminal domain KM397_04910 PF00772 DnaB-like helicase N terminal domain KM397_04935 PF01925 Sulfite exporter TauE/SafE KM397_04950 PF07690 Major Facilitator Superfamily KM397_04995 PF07993 Male sterility protein KM397_04995 PF00550 Phosphopantetheine attachment site KM397_05000 PF18665 Tetracyclin repressor-like, C-terminal domain KM397_05000 PF00440 Bacterial regulatory proteins, tetR family KM397_05020 PF01066 CDP-alcohol phosphatidyltransferase KM397_05040 PF02733 Dak1 domain KM397_05050 PF02733 Dak1 domain KM397_05055 PF02525 Flavodoxin-like fold KM397_05060 PF02082 Transcriptional regulator KM397_05090 PF01966 HD domain KM397_05090 PF00672 HAMP domain KM397_05110 PF00395 S-layer homology domain KM397_05135 PF11181 Heat induced stress protein YflT KM397_05140 PF05532 CsbD-like KM397_05155 PF01740 STAS domain KM397_05160 PF13581 Histidine kinase-like ATPase domain KM397_05165 PF04542 Sigma-70 region 2 KM397_05165 PF04539 Sigma-70 region 3 KM397_05165 PF04545 Sigma-70, region 4 KM397_05175 PF13426 PAS domain KM397_05175 PF07228 Stage II sporulation protein E (SpoIIE) KM397_05180 PF03705 CheR methyltransferase, all-alpha domain KM397_05180 PF01739 CheR methyltransferase, SAM binding domain KM397_05185 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM397_05185 PF00072 Response regulator receiver domain KM397_05185 PF01627 Hpt domain KM397_05185 PF00512 His Kinase A (phospho-acceptor) domain KM397_05185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_05210 PF01906 Putative heavy-metal-binding KM397_05220 PF08240 Alcohol dehydrogenase GroES-like domain KM397_05220 PF00107 Zinc-binding dehydrogenase KM397_05225 PF11121 Protein of unknown function (DUF2639) KM397_05240 PF00149 Calcineurin-like phosphoesterase KM397_05245 PF13514 AAA domain KM397_05250 PF12323 Helix-turn-helix domain KM397_05250 PF01385 Probable transposase KM397_05250 PF07282 Putative transposase DNA-binding domain KM397_05260 PF01966 HD domain KM397_05260 PF01336 OB-fold nucleic acid binding domain KM397_05265 PF00440 Bacterial regulatory proteins, tetR family KM397_05270 PF07690 Major Facilitator Superfamily KM397_05275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM397_05280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM397_05285 PF18801 response regulator aspartate phosphatase H, N terminal KM397_05290 PF00561 alpha/beta hydrolase fold KM397_05290 PF08386 TAP-like protein KM397_05310 PF04309 Glycerol-3-phosphate responsive antiterminator KM397_05315 PF00230 Major intrinsic protein KM397_05320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM397_05320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM397_05325 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KM397_05325 PF01266 FAD dependent oxidoreductase KM397_05340 PF08281 Sigma-70, region 4 KM397_05340 PF04542 Sigma-70 region 2 KM397_05365 PF07690 Major Facilitator Superfamily KM397_05370 PF07690 Major Facilitator Superfamily KM397_05380 PF13538 UvrD-like helicase C-terminal domain KM397_05400 PF01047 MarR family KM397_05405 PF12732 YtxH-like protein KM397_05410 PF01230 HIT domain KM397_05415 PF00005 ABC transporter KM397_05420 PF05975 Bacterial ABC transporter protein EcsB KM397_05425 PF12787 EcsC protein family KM397_05435 PF00440 Bacterial regulatory proteins, tetR family KM397_05435 PF17934 Tetracyclin repressor-like, C-terminal domain KM397_05445 PF03703 Bacterial PH domain KM397_05495 PF03703 Bacterial PH domain KM397_05500 PF03703 Bacterial PH domain KM397_05505 PF03992 Antibiotic biosynthesis monooxygenase KM397_05510 PF00912 Transglycosylase KM397_05510 PF00905 Penicillin binding protein transpeptidase domain KM397_05515 PF01208 Uroporphyrinogen decarboxylase (URO-D) KM397_05520 PF00762 Ferrochelatase KM397_05525 PF01593 Flavin containing amine oxidoreductase KM397_05550 PF03965 Penicillinase repressor KM397_05560 PF17932 Tetracyclin repressor-like, C-terminal domain KM397_05560 PF00440 Bacterial regulatory proteins, tetR family KM397_05590 PF00356 Bacterial regulatory proteins, lacI family KM397_05595 PF14149 YhfH-like protein KM397_05600 PF12706 Beta-lactamase superfamily domain KM397_05605 PF10437 Bacterial lipoate protein ligase C-terminus KM397_05605 PF03099 Biotin/lipoate A/B protein ligase family KM397_05615 PF00501 AMP-binding enzyme KM397_05615 PF13193 AMP-binding enzyme C-terminal domain KM397_05625 PF01520 N-acetylmuramoyl-L-alanine amidase KM397_05625 PF00395 S-layer homology domain KM397_05630 PF05593 RHS Repeat KM397_05645 PF05593 RHS Repeat KM397_05685 PF01966 HD domain KM397_05695 PF04542 Sigma-70 region 2 KM397_05695 PF08281 Sigma-70, region 4 KM397_05700 PF06445 GyrI-like small molecule binding domain KM397_05700 PF12833 Helix-turn-helix domain KM397_05715 PF00512 His Kinase A (phospho-acceptor) domain KM397_05715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_05720 PF00486 Transcriptional regulatory protein, C terminal KM397_05720 PF00072 Response regulator receiver domain KM397_05745 PF01435 Peptidase family M48 KM397_05745 PF16491 CAAX prenyl protease N-terminal, five membrane helices KM397_05750 PF02743 Cache domain KM397_05750 PF00672 HAMP domain KM397_05750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM397_05755 PF00892 EamA-like transporter family KM397_05760 PF03424 Carbohydrate binding domain (family 17/28) KM397_05760 PF00150 Cellulase (glycosyl hydrolase family 5) KM397_05760 PF00395 S-layer homology domain KM397_05770 PF00395 S-layer homology domain KM397_05775 PF01274 Malate synthase KM397_05780 PF00463 Isocitrate lyase family KM397_05790 PF00313 'Cold-shock' DNA-binding domain KM397_05805 PF06338 ComK protein KM397_05810 PF09335 SNARE associated Golgi protein KM397_05815 PF10502 Signal peptidase, peptidase S26 KM397_05820 PF12705 PD-(D/E)XK nuclease superfamily KM397_05820 PF13361 UvrD-like helicase C-terminal domain KM397_05825 PF12705 PD-(D/E)XK nuclease superfamily KM397_05825 PF00580 UvrD/REP helicase N-terminal domain KM397_05825 PF13361 UvrD-like helicase C-terminal domain KM397_05835 PF10676 Spore germination protein gerPA/gerPF KM397_05840 PF10970 Spore germination protein GerPE KM397_05850 PF10737 Spore germination protein GerPC KM397_05855 PF10803 Spore germination GerPB KM397_05860 PF10676 Spore germination protein gerPA/gerPF KM397_05870 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM397_05880 PF00202 Aminotransferase class-III KM397_05885 PF07457 Protein of unknown function (DUF1516) KM397_05895 PF00733 Asparagine synthase KM397_05895 PF13537 Glutamine amidotransferase domain KM397_05900 PF00762 Ferrochelatase KM397_05905 PF00199 Catalase KM397_05905 PF06628 Catalase-related immune-responsive KM397_05910 PF00909 Ammonium Transporter Family KM397_05915 PF00128 Alpha amylase, catalytic domain KM397_05925 PF04461 Protein of unknown function (DUF520) KM397_05930 PF17783 CvfB-like winged helix domain KM397_05930 PF13509 S1 domain KM397_05940 PF00639 PPIC-type PPIASE domain KM397_05950 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM397_05950 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM397_05955 PF12758 Protein of unknown function (DUF3813) KM397_05970 PF14168 YjzC-like protein KM397_05975 PF02861 Clp amino terminal domain, pathogenicity island component KM397_05975 PF17871 AAA lid domain KM397_05975 PF10431 C-terminal, D2-small domain, of ClpB protein KM397_05975 PF00004 ATPase family associated with various cellular activities (AAA) KM397_05975 PF07724 AAA domain (Cdc48 subfamily) KM397_05995 PF10815 ComZ KM397_06000 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM397_06000 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM397_06005 PF00109 Beta-ketoacyl synthase, N-terminal domain KM397_06005 PF02801 Beta-ketoacyl synthase, C-terminal domain KM397_06010 PF10026 Predicted Zn-dependent protease (DUF2268) KM397_06015 PF12227 Protein of unknown function (DUF3603) KM397_06020 PF00579 tRNA synthetases class I (W and Y) KM397_06030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_06035 PF00528 Binding-protein-dependent transport system inner membrane component KM397_06040 PF00528 Binding-protein-dependent transport system inner membrane component KM397_06040 PF12911 N-terminal TM domain of oligopeptide transport permease C KM397_06045 PF00005 ABC transporter KM397_06045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM397_06050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM397_06050 PF00005 ABC transporter KM397_06055 PF01554 MatE KM397_06060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_06070 PF03960 ArsC family KM397_06075 PF03741 Integral membrane protein TerC family KM397_06080 PF05389 Negative regulator of genetic competence (MecA) KM397_06085 PF13091 PLD-like domain KM397_06085 PF13396 Phospholipase_D-nuclease N-terminal KM397_06095 PF01432 Peptidase family M3 KM397_06095 PF08439 Oligopeptidase F KM397_06110 PF01152 Bacterial-like globin KM397_06115 PF01928 CYTH domain KM397_06125 PF04607 Region found in RelA / SpoT proteins KM397_06130 PF01513 ATP-NAD kinase KM397_06135 PF00849 RNA pseudouridylate synthase KM397_06145 PF00149 Calcineurin-like phosphoesterase KM397_06155 PF00535 Glycosyl transferase family 2 KM397_06160 PF08241 Methyltransferase domain KM397_06165 PF05711 Macrocin-O-methyltransferase (TylF) KM397_06175 PF00535 Glycosyl transferase family 2 KM397_06175 PF13181 Tetratricopeptide repeat KM397_06195 PF00483 Nucleotidyl transferase KM397_06200 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KM397_06205 PF16363 GDP-mannose 4,6 dehydratase KM397_06210 PF04321 RmlD substrate binding domain KM397_06230 PF07098 Protein of unknown function (DUF1360) KM397_06250 PF00580 UvrD/REP helicase N-terminal domain KM397_06250 PF13361 UvrD-like helicase C-terminal domain KM397_06255 PF13673 Acetyltransferase (GNAT) domain KM397_06265 PF00756 Putative esterase KM397_06280 PF02368 Bacterial Ig-like domain (group 2) KM397_06285 PF00474 Sodium:solute symporter family KM397_06290 PF04715 Anthranilate synthase component I, N terminal region KM397_06290 PF00425 chorismate binding enzyme KM397_06295 PF02885 Glycosyl transferase family, helical bundle domain KM397_06295 PF00591 Glycosyl transferase family, a/b domain KM397_06295 PF00117 Glutamine amidotransferase class-I KM397_06300 PF02885 Glycosyl transferase family, helical bundle domain KM397_06300 PF00591 Glycosyl transferase family, a/b domain KM397_06305 PF00218 Indole-3-glycerol phosphate synthase KM397_06310 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KM397_06315 PF00291 Pyridoxal-phosphate dependent enzyme KM397_06320 PF00290 Tryptophan synthase alpha chain KM397_06330 PF02652 L-lactate permease KM397_06335 PF10042 Uncharacterized conserved protein (DUF2278) KM397_06360 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM397_06360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM397_06390 PF00364 Biotin-requiring enzyme KM397_06390 PF02817 e3 binding domain KM397_06390 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM397_06395 PF00676 Dehydrogenase E1 component KM397_06395 PF02779 Transketolase, pyrimidine binding domain KM397_06395 PF16870 2-oxoglutarate dehydrogenase C-terminal KM397_06400 PF01381 Helix-turn-helix KM397_06460 PF13649 Methyltransferase domain KM397_06470 PF07943 Penicillin-binding protein 5, C-terminal domain KM397_06470 PF00768 D-alanyl-D-alanine carboxypeptidase KM397_06480 PF12389 Camelysin metallo-endopeptidase KM397_06490 PF12389 Camelysin metallo-endopeptidase KM397_06495 PF01381 Helix-turn-helix KM397_06495 PF08671 Anti-repressor SinI KM397_06505 PF05547 Immune inhibitor A peptidase M6 KM397_06510 PF00171 Aldehyde dehydrogenase family KM397_06515 PF00005 ABC transporter KM397_06515 PF08402 TOBE domain KM397_06520 PF00528 Binding-protein-dependent transport system inner membrane component KM397_06525 PF00528 Binding-protein-dependent transport system inner membrane component KM397_06530 PF13416 Bacterial extracellular solute-binding protein KM397_06540 PF03176 MMPL family KM397_06550 PF00849 RNA pseudouridylate synthase KM397_06550 PF01479 S4 domain KM397_06560 PF00188 Cysteine-rich secretory protein family KM397_06565 PF02754 Cysteine-rich domain KM397_06565 PF13183 4Fe-4S dicluster domain KM397_06570 PF01565 FAD binding domain KM397_06570 PF02913 FAD linked oxidases, C-terminal domain KM397_06575 PF05651 Putative sugar diacid recognition KM397_06575 PF17853 GGDEF-like domain KM397_06575 PF13556 PucR C-terminal helix-turn-helix domain KM397_06585 PF00486 Transcriptional regulatory protein, C terminal KM397_06585 PF00072 Response regulator receiver domain KM397_06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_06590 PF18698 Histidine kinase sensor domain KM397_06590 PF00512 His Kinase A (phospho-acceptor) domain KM397_06590 PF00989 PAS fold KM397_06590 PF00672 HAMP domain KM397_06595 PF07729 FCD domain KM397_06595 PF00392 Bacterial regulatory proteins, gntR family KM397_06600 PF02754 Cysteine-rich domain KM397_06605 PF11870 Domain of unknown function (DUF3390) KM397_06605 PF13183 4Fe-4S dicluster domain KM397_06605 PF02589 LUD domain KM397_06610 PF02589 LUD domain KM397_06615 PF06750 Bacterial Peptidase A24 N-terminal domain KM397_06615 PF01478 Type IV leader peptidase family KM397_06630 PF01226 Formate/nitrite transporter KM397_06635 PF03741 Integral membrane protein TerC family KM397_06640 PF02386 Cation transport protein KM397_06645 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM397_06650 PF01575 MaoC like domain KM397_06675 PF00561 alpha/beta hydrolase fold KM397_06680 PF01266 FAD dependent oxidoreductase KM397_06685 PF02386 Cation transport protein KM397_06715 PF13419 Haloacid dehalogenase-like hydrolase KM397_06720 PF00266 Aminotransferase class-V KM397_06730 PF08220 DeoR-like helix-turn-helix domain KM397_06730 PF00455 DeoR C terminal sensor domain KM397_06750 PF04748 Divergent polysaccharide deacetylase KM397_06755 PF09388 Spo0E like sporulation regulatory protein KM397_06760 PF02743 Cache domain KM397_06760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_06760 PF00512 His Kinase A (phospho-acceptor) domain KM397_06765 PF01047 MarR family KM397_06775 PF12867 DinB superfamily KM397_06780 PF00989 PAS fold KM397_06780 PF13188 PAS domain KM397_06780 PF00512 His Kinase A (phospho-acceptor) domain KM397_06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_06780 PF13426 PAS domain KM397_06785 PF06508 Queuosine biosynthesis protein QueC KM397_06790 PF01242 6-pyruvoyl tetrahydropterin synthase KM397_06795 PF04055 Radical SAM superfamily KM397_06800 PF14489 QueF-like protein KM397_06805 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KM397_06835 PF07972 NrdI Flavodoxin like KM397_06855 PF00268 Ribonucleotide reductase, small chain KM397_06860 PF00392 Bacterial regulatory proteins, gntR family KM397_06865 PF00005 ABC transporter KM397_06875 PF00005 ABC transporter KM397_06895 PF01037 Lrp/AsnC ligand binding domain KM397_06905 PF00857 Isochorismatase family KM397_06915 PF17676 LD-carboxypeptidase C-terminal domain KM397_06915 PF02016 LD-carboxypeptidase N-terminal domain KM397_06920 PF03060 Nitronate monooxygenase KM397_06925 PF04914 DltD protein KM397_06930 PF00550 Phosphopantetheine attachment site KM397_06935 PF03062 MBOAT, membrane-bound O-acyltransferase family KM397_06940 PF00501 AMP-binding enzyme KM397_06940 PF13193 AMP-binding enzyme C-terminal domain KM397_06950 PF07687 Peptidase dimerisation domain KM397_06950 PF01546 Peptidase family M20/M25/M40 KM397_06960 PF00258 Flavodoxin KM397_06975 PF01636 Phosphotransferase enzyme family KM397_06995 PF01554 MatE KM397_07000 PF02673 Bacitracin resistance protein BacA KM397_07015 PF01047 MarR family KM397_07025 PF00375 Sodium:dicarboxylate symporter family KM397_07030 PF02386 Cation transport protein KM397_07040 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM397_07050 PF03698 Uncharacterised protein family (UPF0180) KM397_07065 PF01063 Amino-transferase class IV KM397_07070 PF00205 Thiamine pyrophosphate enzyme, central domain KM397_07070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM397_07070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM397_07075 PF10369 Small subunit of acetolactate synthase KM397_07075 PF01842 ACT domain KM397_07080 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM397_07080 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM397_07085 PF00682 HMGL-like KM397_07085 PF08502 LeuA allosteric (dimerisation) domain KM397_07090 PF00180 Isocitrate/isopropylmalate dehydrogenase KM397_07095 PF00330 Aconitase family (aconitate hydratase) KM397_07100 PF00694 Aconitase C-terminal domain KM397_07105 PF13393 Histidyl-tRNA synthetase KM397_07110 PF01634 ATP phosphoribosyltransferase KM397_07115 PF00815 Histidinol dehydrogenase KM397_07120 PF00475 Imidazoleglycerol-phosphate dehydratase KM397_07125 PF00117 Glutamine amidotransferase class-I KM397_07130 PF00977 Histidine biosynthesis protein KM397_07135 PF00977 Histidine biosynthesis protein KM397_07140 PF01502 Phosphoribosyl-AMP cyclohydrolase KM397_07145 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KM397_07150 PF02811 PHP domain KM397_07160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM397_07160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM397_07165 PF01066 CDP-alcohol phosphatidyltransferase KM397_07170 PF00884 Sulfatase KM397_07180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KM397_07180 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KM397_07190 PF01507 Phosphoadenosine phosphosulfate reductase family KM397_07195 PF14306 PUA-like domain KM397_07195 PF01747 ATP-sulfurylase KM397_07205 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM397_07205 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM397_07215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM397_07220 PF01903 CbiX KM397_07230 PF00209 Sodium:neurotransmitter symporter family KM397_07240 PF00375 Sodium:dicarboxylate symporter family KM397_07250 PF03553 Na+/H+ antiporter family KM397_07265 PF09922 Cell wall-active antibiotics response 4TMS YvqF KM397_07270 PF07730 Histidine kinase KM397_07270 PF00672 HAMP domain KM397_07270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_07275 PF00072 Response regulator receiver domain KM397_07275 PF00196 Bacterial regulatory proteins, luxR family KM397_07285 PF05525 Branched-chain amino acid transport protein KM397_07295 PF08241 Methyltransferase domain KM397_07320 PF00175 Oxidoreductase NAD-binding domain KM397_07320 PF00970 Oxidoreductase FAD-binding domain KM397_07320 PF00042 Globin KM397_07335 PF01925 Sulfite exporter TauE/SafE KM397_07340 PF01384 Phosphate transporter family KM397_07345 PF01865 Protein of unknown function DUF47 KM397_07350 PF00912 Transglycosylase KM397_07350 PF00905 Penicillin binding protein transpeptidase domain KM397_07365 PF00989 PAS fold KM397_07365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_07365 PF00512 His Kinase A (phospho-acceptor) domain KM397_07370 PF01904 Protein of unknown function DUF72 KM397_07380 PF00589 Phage integrase family KM397_07385 PF16736 Single Cache-like KM397_07385 PF00989 PAS fold KM397_07385 PF00512 His Kinase A (phospho-acceptor) domain KM397_07385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_07390 PF01048 Phosphorylase superfamily KM397_07405 PF09924 Uncharacterised conserved protein (DUF2156) KM397_07405 PF03706 Lysylphosphatidylglycerol synthase TM region KM397_07420 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM397_07420 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM397_07425 PF07943 Penicillin-binding protein 5, C-terminal domain KM397_07425 PF00768 D-alanyl-D-alanine carboxypeptidase KM397_07430 PF07670 Nucleoside recognition KM397_07435 PF07670 Nucleoside recognition KM397_07440 PF00849 RNA pseudouridylate synthase KM397_07440 PF01479 S4 domain KM397_07445 PF00578 AhpC/TSA family KM397_07450 PF05140 ResB-like family KM397_07455 PF01578 Cytochrome C assembly protein KM397_07460 PF00072 Response regulator receiver domain KM397_07460 PF00486 Transcriptional regulatory protein, C terminal KM397_07465 PF00989 PAS fold KM397_07465 PF00512 His Kinase A (phospho-acceptor) domain KM397_07465 PF18698 Histidine kinase sensor domain KM397_07465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_07465 PF00672 HAMP domain KM397_07470 PF01923 Cobalamin adenosyltransferase KM397_07485 PF12822 ECF transporter, substrate-specific component KM397_07495 PF14493 Helix-turn-helix domain KM397_07500 PF00271 Helicase conserved C-terminal domain KM397_07500 PF00270 DEAD/DEAH box helicase KM397_07505 PF02517 CPBP intramembrane metalloprotease KM397_07520 PF02310 B12 binding domain KM397_07520 PF02607 B12 binding domain KM397_07520 PF13411 MerR HTH family regulatory protein KM397_07525 PF05389 Negative regulator of genetic competence (MecA) KM397_07530 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM397_07530 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM397_07555 PF00710 Asparaginase, N-terminal KM397_07555 PF17763 Glutaminase/Asparaginase C-terminal domain KM397_07565 PF02224 Cytidylate kinase KM397_07570 PF00575 S1 RNA binding domain KM397_07575 PF01070 FMN-dependent dehydrogenase KM397_07580 PF14140 YpzI-like protein KM397_07590 PF14045 YIEGIA protein KM397_07600 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KM397_07600 PF01926 50S ribosome-binding GTPase KM397_07605 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KM397_07605 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KM397_07615 PF10966 Protein of unknown function (DUF2768) KM397_07625 PF09547 Stage IV sporulation protein A (spore_IV_A) KM397_07630 PF00216 Bacterial DNA-binding protein KM397_07635 PF01227 GTP cyclohydrolase I KM397_07640 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KM397_07645 PF01209 ubiE/COQ5 methyltransferase family KM397_07650 PF00348 Polyprenyl synthetase KM397_07655 PF00334 Nucleoside diphosphate kinase KM397_07660 PF01264 Chorismate synthase KM397_07665 PF01761 3-dehydroquinate synthase KM397_07670 PF00155 Aminotransferase class I and II KM397_07680 PF08864 UPF0302 domain KM397_07680 PF08858 IDEAL domain KM397_07685 PF10673 Protein of unknown function (DUF2487) KM397_07690 PF00355 Rieske [2Fe-2S] domain KM397_07695 PF00033 Cytochrome b/b6/petB KM397_07700 PF00032 Cytochrome b(C-terminal)/b6/petD KM397_07700 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM397_07705 PF07187 Protein of unknown function (DUF1405) KM397_07715 PF09577 Sporulation protein YpjB (SpoYpjB) KM397_07720 PF04298 Putative neutral zinc metallopeptidase KM397_07730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM397_07730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM397_07735 PF03819 MazG nucleotide pyrophosphohydrolase domain KM397_07740 PF01113 Dihydrodipicolinate reductase, N-terminus KM397_07740 PF05173 Dihydrodipicolinate reductase, C-terminus KM397_07745 PF02142 MGS-like domain KM397_07750 PF02585 GlcNAc-PI de-N-acetylase KM397_07755 PF13439 Glycosyltransferase Family 4 KM397_07755 PF00534 Glycosyl transferases group 1 KM397_07760 PF01743 Poly A polymerase head domain KM397_07760 PF12627 Probable RNA and SrmB- binding site of polymerase A KM397_07760 PF13735 tRNA nucleotidyltransferase domain 2 putative KM397_07765 PF08279 HTH domain KM397_07765 PF02237 Biotin protein ligase C terminal domain KM397_07765 PF03099 Biotin/lipoate A/B protein ligase family KM397_07775 PF02548 Ketopantoate hydroxymethyltransferase KM397_07780 PF02569 Pantoate-beta-alanine ligase KM397_07785 PF02261 Aspartate decarboxylase KM397_07790 PF13307 Helicase C-terminal domain KM397_07790 PF04851 Type III restriction enzyme, res subunit KM397_07790 PF00929 Exonuclease KM397_07795 PF14084 Protein of unknown function (DUF4264) KM397_07805 PF00155 Aminotransferase class I and II KM397_07810 PF07261 Replication initiation and membrane attachment KM397_07815 PF00633 Helix-hairpin-helix motif KM397_07815 PF10576 Iron-sulfur binding domain of endonuclease III KM397_07815 PF00730 HhH-GPD superfamily base excision DNA repair protein KM397_07825 PF00905 Penicillin binding protein transpeptidase domain KM397_07825 PF00912 Transglycosylase KM397_07830 PF03838 Recombination protein U KM397_07835 PF10720 Protein of unknown function (DUF2515) KM397_07870 PF06908 YspA SLOG family KM397_07875 PF05103 DivIVA protein KM397_07885 PF01170 Putative RNA methylase family UPF0020 KM397_07885 PF02926 THUMP domain KM397_07895 PF13307 Helicase C-terminal domain KM397_07900 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KM397_07910 PF01636 Phosphotransferase enzyme family KM397_07915 PF00557 Metallopeptidase family M24 KM397_07920 PF00156 Phosphoribosyl transferase domain KM397_07925 PF00860 Permease family KM397_07930 PF04235 Protein of unknown function (DUF418) KM397_07935 PF00350 Dynamin family KM397_07945 PF00583 Acetyltransferase (GNAT) family KM397_07950 PF10752 Protein of unknown function (DUF2533) KM397_07955 PF00581 Rhodanese-like domain KM397_07990 PF00689 Cation transporting ATPase, C-terminus KM397_07990 PF00690 Cation transporter/ATPase, N-terminus KM397_07995 PF01367 5'-3' exonuclease, C-terminal SAM fold KM397_07995 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM397_08020 PF02397 Bacterial sugar transferase KM397_08035 PF00535 Glycosyl transferase family 2 KM397_08055 PF13673 Acetyltransferase (GNAT) domain KM397_08055 PF18014 Acetyltransferase (GNAT) domain KM397_08075 PF13456 Reverse transcriptase-like KM397_08080 PF01263 Aldose 1-epimerase KM397_08105 PF00313 'Cold-shock' DNA-binding domain KM397_08115 PF01810 LysE type translocator KM397_08130 PF04341 Protein of unknown function, DUF485 KM397_08135 PF00474 Sodium:solute symporter family KM397_08140 PF00202 Aminotransferase class-III KM397_08150 PF00999 Sodium/hydrogen exchanger family KM397_08155 PF00753 Metallo-beta-lactamase superfamily KM397_08155 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM397_08155 PF17770 Ribonuclease J C-terminal domain KM397_08170 PF04239 Protein of unknown function (DUF421) KM397_08175 PF02698 DUF218 domain KM397_08185 PF00881 Nitroreductase family KM397_08230 PF17209 Hfq protein KM397_08240 PF01618 MotA/TolQ/ExbB proton channel family KM397_08245 PF13677 Membrane MotB of proton-channel complex MotA/MotB KM397_08245 PF00691 OmpA family KM397_08250 PF00072 Response regulator receiver domain KM397_08255 PF07194 P2 response regulator binding domain KM397_08255 PF01627 Hpt domain KM397_08255 PF02895 Signal transducing histidine kinase, homodimeric domain KM397_08255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_08255 PF01584 CheW-like domain KM397_08260 PF01584 CheW-like domain KM397_08260 PF02895 Signal transducing histidine kinase, homodimeric domain KM397_08260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_08260 PF01627 Hpt domain KM397_08260 PF07194 P2 response regulator binding domain KM397_08265 PF04509 CheC-like family KM397_08265 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM397_08280 PF03705 CheR methyltransferase, all-alpha domain KM397_08280 PF01739 CheR methyltransferase, SAM binding domain KM397_08300 PF00460 Flagella basal body rod protein KM397_08300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM397_08325 PF00460 Flagella basal body rod protein KM397_08330 PF00460 Flagella basal body rod protein KM397_08330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM397_08335 PF02049 Flagellar hook-basal body complex protein FliE KM397_08345 PF01706 FliG C-terminal domain KM397_08345 PF14841 FliG middle domain KM397_08345 PF14842 FliG N-terminal domain KM397_08355 PF18269 T3SS EscN ATPase C-terminal domain KM397_08355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM397_08355 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM397_08380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM397_08380 PF00460 Flagella basal body rod protein KM397_08380 PF07559 Flagellar basal body protein FlaE KM397_08395 PF01584 CheW-like domain KM397_08395 PF00072 Response regulator receiver domain KM397_08400 PF12181 DNA binding domain of the motility gene repressor (MogR) KM397_08405 PF00535 Glycosyl transferase family 2 KM397_08440 PF00700 Bacterial flagellin C-terminal helical region KM397_08440 PF00669 Bacterial flagellin N-terminal helical region KM397_08445 PF01464 Transglycosylase SLT domain KM397_08460 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM397_08460 PF04509 CheC-like family KM397_08470 PF00813 FliP family KM397_08475 PF01313 Bacterial export proteins, family 3 KM397_08485 PF01312 FlhB HrpN YscU SpaS Family KM397_08490 PF00771 FHIPEP family KM397_08500 PF00460 Flagella basal body rod protein KM397_08500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM397_08505 PF02272 DHHA1 domain KM397_08505 PF01411 tRNA synthetases class II (A) KM397_08505 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM397_08530 PF17932 Tetracyclin repressor-like, C-terminal domain KM397_08530 PF00440 Bacterial regulatory proteins, tetR family KM397_08535 PF17329 Family of unknown function (DUF5367) KM397_08550 PF03992 Antibiotic biosynthesis monooxygenase KM397_08555 PF08141 Small acid-soluble spore protein H family KM397_08575 PF03466 LysR substrate binding domain KM397_08575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM397_08580 PF00005 ABC transporter KM397_08580 PF08402 TOBE domain KM397_08590 PF00528 Binding-protein-dependent transport system inner membrane component KM397_08595 PF00753 Metallo-beta-lactamase superfamily KM397_08595 PF12706 Beta-lactamase superfamily domain KM397_08605 PF10787 Uncharacterised protein from bacillus cereus group KM397_08620 PF07943 Penicillin-binding protein 5, C-terminal domain KM397_08620 PF00768 D-alanyl-D-alanine carboxypeptidase KM397_08630 PF00300 Histidine phosphatase superfamily (branch 1) KM397_08660 PF13537 Glutamine amidotransferase domain KM397_08660 PF00733 Asparagine synthase KM397_08680 PF01545 Cation efflux family KM397_08680 PF16916 Dimerisation domain of Zinc Transporter KM397_08690 PF07729 FCD domain KM397_08690 PF00392 Bacterial regulatory proteins, gntR family KM397_08695 PF00892 EamA-like transporter family KM397_08700 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM397_08700 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM397_08705 PF03773 Predicted permease KM397_08715 PF00535 Glycosyl transferase family 2 KM397_08720 PF03553 Na+/H+ antiporter family KM397_08725 PF00206 Lyase KM397_08725 PF10415 Fumarase C C-terminus KM397_08750 PF03575 Peptidase family S51 KM397_08770 PF02683 Cytochrome C biogenesis protein transmembrane region KM397_08775 PF00578 AhpC/TSA family KM397_08795 PF00291 Pyridoxal-phosphate dependent enzyme KM397_08800 PF04286 Protein of unknown function (DUF445) KM397_08825 PF00196 Bacterial regulatory proteins, luxR family KM397_08825 PF00072 Response regulator receiver domain KM397_08830 PF13185 GAF domain KM397_08830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_08830 PF07730 Histidine kinase KM397_08830 PF13492 GAF domain KM397_08835 PF00005 ABC transporter KM397_08850 PF13091 PLD-like domain KM397_08855 PF00696 Amino acid kinase family KM397_08860 PF00375 Sodium:dicarboxylate symporter family KM397_08865 PF10415 Fumarase C C-terminus KM397_08865 PF00206 Lyase KM397_08870 PF03949 Malic enzyme, NAD binding domain KM397_08870 PF00390 Malic enzyme, N-terminal domain KM397_08875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_08880 PF00072 Response regulator receiver domain KM397_08880 PF08664 YcbB domain KM397_08885 PF00271 Helicase conserved C-terminal domain KM397_08885 PF00176 SNF2 family N-terminal domain KM397_08885 PF04434 SWIM zinc finger KM397_08900 PF03590 Aspartate-ammonia ligase KM397_08920 PF13840 ACT domain KM397_08920 PF00696 Amino acid kinase family KM397_08930 PF13761 Domain of unknown function (DUF4166) KM397_08935 PF14158 YndJ-like protein KM397_08940 PF00293 NUDIX domain KM397_08945 PF02368 Bacterial Ig-like domain (group 2) KM397_08945 PF13205 Bacterial Ig-like domain KM397_08945 PF00395 S-layer homology domain KM397_08955 PF07690 Major Facilitator Superfamily KM397_08970 PF02554 Carbon starvation protein CstA KM397_08975 PF03976 Polyphosphate kinase 2 (PPK2) KM397_08985 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM397_08985 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM397_08995 PF16360 GTP-binding GTPase Middle Region KM397_08995 PF13167 GTP-binding GTPase N-terminal KM397_08995 PF01926 50S ribosome-binding GTPase KM397_09005 PF07690 Major Facilitator Superfamily KM397_09010 PF00291 Pyridoxal-phosphate dependent enzyme KM397_09025 PF01943 Polysaccharide biosynthesis protein KM397_09025 PF14667 Polysaccharide biosynthesis C-terminal domain KM397_09030 PF00209 Sodium:neurotransmitter symporter family KM397_09035 PF03422 Carbohydrate binding module (family 6) KM397_09035 PF00457 Glycosyl hydrolases family 11 KM397_09035 PF01522 Polysaccharide deacetylase KM397_09045 PF04239 Protein of unknown function (DUF421) KM397_09060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM397_09060 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM397_09075 PF01625 Peptide methionine sulfoxide reductase KM397_09085 PF01063 Amino-transferase class IV KM397_09090 PF00205 Thiamine pyrophosphate enzyme, central domain KM397_09090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM397_09090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM397_09095 PF10369 Small subunit of acetolactate synthase KM397_09100 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM397_09100 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM397_09105 PF00920 Dehydratase family KM397_09110 PF00585 C-terminal regulatory domain of Threonine dehydratase KM397_09110 PF00291 Pyridoxal-phosphate dependent enzyme KM397_09120 PF09587 Bacterial capsule synthesis protein PGA_cap KM397_09135 PF07690 Major Facilitator Superfamily KM397_09140 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KM397_09150 PF04397 LytTr DNA-binding domain KM397_09150 PF00072 Response regulator receiver domain KM397_09155 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KM397_09155 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KM397_09170 PF01979 Amidohydrolase family KM397_09175 PF13026 Protein of unknown function (DUF3887) KM397_09175 PF12146 Serine aminopeptidase, S33 KM397_09205 PF04055 Radical SAM superfamily KM397_09205 PF13186 Iron-sulfur cluster-binding domain KM397_09210 PF13302 Acetyltransferase (GNAT) domain KM397_09215 PF00072 Response regulator receiver domain KM397_09215 PF00486 Transcriptional regulatory protein, C terminal KM397_09230 PF01566 Natural resistance-associated macrophage protein KM397_09235 PF00581 Rhodanese-like domain KM397_09235 PF12368 Rhodanase C-terminal KM397_09235 PF17773 UPF0176 acylphosphatase like domain KM397_09245 PF02558 Ketopantoate reductase PanE/ApbA KM397_09245 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM397_09260 PF05791 Bacillus haemolytic enterotoxin (HBL) KM397_09275 PF04198 Putative sugar-binding domain KM397_09280 PF01791 DeoC/LacD family aldolase KM397_09285 PF01773 Na+ dependent nucleoside transporter N-terminus KM397_09285 PF07662 Na+ dependent nucleoside transporter C-terminus KM397_09290 PF02885 Glycosyl transferase family, helical bundle domain KM397_09290 PF00591 Glycosyl transferase family, a/b domain KM397_09290 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM397_09295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM397_09305 PF05979 Bacterial protein of unknown function (DUF896) KM397_09325 PF00557 Metallopeptidase family M24 KM397_09325 PF05195 Aminopeptidase P, N-terminal domain KM397_09330 PF07732 Multicopper oxidase KM397_09330 PF07731 Multicopper oxidase KM397_09335 PF01551 Peptidase family M23 KM397_09345 PF01751 Toprim domain KM397_09345 PF01396 Topoisomerase DNA binding C4 zinc finger KM397_09345 PF01131 DNA topoisomerase KM397_09345 PF13342 C-terminal repeat of topoisomerase KM397_09360 PF02525 Flavodoxin-like fold KM397_09375 PF04234 CopC domain KM397_09375 PF05425 Copper resistance protein D KM397_09375 PF13115 YtkA-like KM397_09380 PF07987 Domain of unkown function (DUF1775) KM397_09390 PF00892 EamA-like transporter family KM397_09395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM397_09395 PF03466 LysR substrate binding domain KM397_09400 PF02082 Transcriptional regulator KM397_09405 PF01323 DSBA-like thioredoxin domain KM397_09410 PF00881 Nitroreductase family KM397_09415 PF01425 Amidase KM397_09420 PF01594 AI-2E family transporter KM397_09425 PF00056 lactate/malate dehydrogenase, NAD binding domain KM397_09425 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM397_09430 PF01593 Flavin containing amine oxidoreductase KM397_09435 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM397_09435 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM397_09450 PF00501 AMP-binding enzyme KM397_09450 PF13193 AMP-binding enzyme C-terminal domain KM397_09455 PF01575 MaoC like domain KM397_09460 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM397_09460 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM397_09470 PF12399 Branched-chain amino acid ATP-binding cassette transporter KM397_09470 PF00005 ABC transporter KM397_09475 PF00005 ABC transporter KM397_09480 PF02653 Branched-chain amino acid transport system / permease component KM397_09490 PF03466 LysR substrate binding domain KM397_09490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM397_09500 PF14552 Tautomerase enzyme KM397_09510 PF01047 MarR family KM397_09520 PF01654 Cytochrome bd terminal oxidase subunit I KM397_09525 PF02322 Cytochrome bd terminal oxidase subunit II KM397_09530 PF00005 ABC transporter KM397_09530 PF00664 ABC transporter transmembrane region KM397_09535 PF00005 ABC transporter KM397_09535 PF00664 ABC transporter transmembrane region KM397_09550 PF17676 LD-carboxypeptidase C-terminal domain KM397_09550 PF02016 LD-carboxypeptidase N-terminal domain KM397_09555 PF07943 Penicillin-binding protein 5, C-terminal domain KM397_09555 PF00768 D-alanyl-D-alanine carboxypeptidase KM397_09570 PF01476 LysM domain KM397_09570 PF00877 NlpC/P60 family KM397_09585 PF00486 Transcriptional regulatory protein, C terminal KM397_09585 PF00072 Response regulator receiver domain KM397_09590 PF00512 His Kinase A (phospho-acceptor) domain KM397_09590 PF00989 PAS fold KM397_09590 PF16736 Single Cache-like KM397_09590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_09600 PF00106 short chain dehydrogenase KM397_09610 PF04439 Streptomycin adenylyltransferase KM397_09615 PF01522 Polysaccharide deacetylase KM397_09635 PF00742 Homoserine dehydrogenase KM397_09635 PF01842 ACT domain KM397_09635 PF03447 Homoserine dehydrogenase, NAD binding domain KM397_09640 PF00291 Pyridoxal-phosphate dependent enzyme KM397_09645 PF08544 GHMP kinases C terminal KM397_09645 PF00288 GHMP kinases N terminal domain KM397_09660 PF03816 Cell envelope-related transcriptional attenuator domain KM397_09670 PF00072 Response regulator receiver domain KM397_09670 PF00486 Transcriptional regulatory protein, C terminal KM397_09675 PF00512 His Kinase A (phospho-acceptor) domain KM397_09675 PF00989 PAS fold KM397_09675 PF16736 Single Cache-like KM397_09675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_09680 PF01522 Polysaccharide deacetylase KM397_09690 PF02308 MgtC family KM397_09695 PF00583 Acetyltransferase (GNAT) family KM397_09700 PF06276 Ferric iron reductase FhuF-like transporter KM397_09700 PF04183 IucA / IucC family KM397_09705 PF06276 Ferric iron reductase FhuF-like transporter KM397_09705 PF04183 IucA / IucC family KM397_09710 PF13193 AMP-binding enzyme C-terminal domain KM397_09710 PF00501 AMP-binding enzyme KM397_09725 PF01261 Xylose isomerase-like TIM barrel KM397_09730 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM397_09740 PF01810 LysE type translocator KM397_09750 PF01734 Patatin-like phospholipase KM397_09775 PF00293 NUDIX domain KM397_09775 PF13344 Haloacid dehalogenase-like hydrolase KM397_09780 PF02540 NAD synthase KM397_09790 PF18277 AbrB C-terminal domain KM397_09790 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM397_09795 PF00082 Subtilase family KM397_09800 PF01022 Bacterial regulatory protein, arsR family KM397_09805 PF00248 Aldo/keto reductase family KM397_09810 PF07690 Major Facilitator Superfamily KM397_09830 PF03193 RsgA GTPase KM397_09835 PF00672 HAMP domain KM397_09835 PF02743 Cache domain KM397_09835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM397_09855 PF00210 Ferritin-like domain KM397_09870 PF00296 Luciferase-like monooxygenase KM397_09880 PF01593 Flavin containing amine oxidoreductase KM397_09890 PF00248 Aldo/keto reductase family KM397_09895 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM397_09895 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM397_09900 PF00583 Acetyltransferase (GNAT) family KM397_09955 PF01297 Zinc-uptake complex component A periplasmic KM397_09955 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM397_09965 PF13460 NAD(P)H-binding KM397_09970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM397_09975 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM397_09975 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM397_09985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_09990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM397_10000 PF00300 Histidine phosphatase superfamily (branch 1) KM397_10010 PF08757 CotH kinase protein KM397_10015 PF00293 NUDIX domain KM397_10020 PF09335 SNARE associated Golgi protein KM397_10025 PF01943 Polysaccharide biosynthesis protein KM397_10025 PF14667 Polysaccharide biosynthesis C-terminal domain KM397_10035 PF03773 Predicted permease KM397_10040 PF09323 Domain of unknown function (DUF1980) KM397_10045 PF03061 Thioesterase superfamily KM397_10055 PF13396 Phospholipase_D-nuclease N-terminal KM397_10055 PF13091 PLD-like domain KM397_10070 PF13460 NAD(P)H-binding KM397_10075 PF04306 Protein of unknown function (DUF456) KM397_10080 PF03471 Transporter associated domain KM397_10080 PF00571 CBS domain KM397_10080 PF01595 Cyclin M transmembrane N-terminal domain KM397_10095 PF05525 Branched-chain amino acid transport protein KM397_10100 PF01588 Putative tRNA binding domain KM397_10120 PF07454 Stage II sporulation protein P (SpoIIP) KM397_10130 PF02557 D-alanyl-D-alanine carboxypeptidase KM397_10140 PF01425 Amidase KM397_10145 PF07690 Major Facilitator Superfamily KM397_10155 PF01145 SPFH domain / Band 7 family KM397_10160 PF00300 Histidine phosphatase superfamily (branch 1) KM397_10175 PF01168 Alanine racemase, N-terminal domain KM397_10175 PF00842 Alanine racemase, C-terminal domain KM397_10180 PF13847 Methyltransferase domain KM397_10195 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM397_10200 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM397_10200 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM397_10205 PF00155 Aminotransferase class I and II KM397_10205 PF00392 Bacterial regulatory proteins, gntR family KM397_10230 PF00583 Acetyltransferase (GNAT) family KM397_10280 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM397_10305 PF01209 ubiE/COQ5 methyltransferase family KM397_10310 PF01268 Formate--tetrahydrofolate ligase KM397_10320 PF00270 DEAD/DEAH box helicase KM397_10320 PF00271 Helicase conserved C-terminal domain KM397_10330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM397_10340 PF08240 Alcohol dehydrogenase GroES-like domain KM397_10340 PF00107 Zinc-binding dehydrogenase KM397_10345 PF04542 Sigma-70 region 2 KM397_10345 PF08281 Sigma-70, region 4 KM397_10370 PF00255 Glutathione peroxidase KM397_10375 PF01841 Transglutaminase-like superfamily KM397_10375 PF13559 Domain of unknown function (DUF4129) KM397_10375 PF11992 Domain of unknown function (DUF3488) KM397_10380 PF01882 Protein of unknown function DUF58 KM397_10385 PF07726 ATPase family associated with various cellular activities (AAA) KM397_10385 PF17863 AAA lid domain KM397_10400 PF00384 Molybdopterin oxidoreductase KM397_10400 PF01568 Molydopterin dinucleotide binding domain KM397_10400 PF14710 Respiratory nitrate reductase alpha N-terminal KM397_10405 PF14711 Respiratory nitrate reductase beta C-terminal KM397_10405 PF13247 4Fe-4S dicluster domain KM397_10410 PF02613 Nitrate reductase delta subunit KM397_10415 PF02665 Nitrate reductase gamma subunit KM397_10420 PF00392 Bacterial regulatory proteins, gntR family KM397_10420 PF00155 Aminotransferase class I and II KM397_10425 PF00005 ABC transporter KM397_10435 PF00027 Cyclic nucleotide-binding domain KM397_10435 PF00325 Bacterial regulatory proteins, crp family KM397_10440 PF06463 Molybdenum Cofactor Synthesis C KM397_10440 PF04055 Radical SAM superfamily KM397_10445 PF00899 ThiF family KM397_10450 PF03453 MoeA N-terminal region (domain I and II) KM397_10450 PF03454 MoeA C-terminal region (domain IV) KM397_10450 PF00994 Probable molybdopterin binding domain KM397_10455 PF02391 MoaE protein KM397_10465 PF07690 Major Facilitator Superfamily KM397_10485 PF01903 CbiX KM397_10490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM397_10495 PF00355 Rieske [2Fe-2S] domain KM397_10500 PF04324 BFD-like [2Fe-2S] binding domain KM397_10500 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM397_10500 PF18267 Rubredoxin NAD+ reductase C-terminal domain KM397_10500 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM397_10500 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM397_10505 PF04405 Domain of Unknown function (DUF542) KM397_10505 PF01814 Hemerythrin HHE cation binding domain KM397_10540 PF04232 Stage V sporulation protein S (SpoVS) KM397_10555 PF01510 N-acetylmuramoyl-L-alanine amidase KM397_10570 PF01966 HD domain KM397_10575 PF00005 ABC transporter KM397_10575 PF12848 ABC transporter KM397_10575 PF16326 ABC transporter C-terminal domain KM397_10590 PF00436 Single-strand binding protein family KM397_10595 PF00440 Bacterial regulatory proteins, tetR family KM397_10605 PF13769 Virulence factor KM397_10605 PF08712 Scaffold protein Nfu/NifU N terminal KM397_10615 PF06491 Disulphide isomerase KM397_10620 PF04445 Putative SAM-dependent methyltransferase KM397_10625 PF03485 Arginyl tRNA synthetase N terminal domain KM397_10625 PF00750 tRNA synthetases class I (R) KM397_10625 PF05746 DALR anticodon binding domain KM397_10650 PF08264 Anticodon-binding domain of tRNA KM397_10650 PF00133 tRNA synthetases class I (I, L, M and V) KM397_10670 PF00152 tRNA synthetases class II (D, K and N) KM397_10670 PF01336 OB-fold nucleic acid binding domain KM397_10690 PF01580 FtsK/SpoIIIE family KM397_10690 PF12538 DNA transporter KM397_10760 PF02595 Glycerate kinase family KM397_10765 PF00939 Sodium:sulfate symporter transmembrane region KM397_10770 PF00072 Response regulator receiver domain KM397_10770 PF00486 Transcriptional regulatory protein, C terminal KM397_10775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_10775 PF00512 His Kinase A (phospho-acceptor) domain KM397_10775 PF00672 HAMP domain KM397_10790 PF00209 Sodium:neurotransmitter symporter family KM397_10805 PF10997 Alternate to MurJ KM397_10820 PF00465 Iron-containing alcohol dehydrogenase KM397_10825 PF01177 Asp/Glu/Hydantoin racemase KM397_10830 PF01980 tRNA-methyltransferase O KM397_10835 PF00583 Acetyltransferase (GNAT) family KM397_10850 PF00005 ABC transporter KM397_10860 PF14005 YpjP-like protein KM397_10865 PF13419 Haloacid dehalogenase-like hydrolase KM397_10885 PF00144 Beta-lactamase KM397_10885 PF07930 D-aminopeptidase, domain B KM397_10890 PF00303 Thymidylate synthase KM397_10895 PF00186 Dihydrofolate reductase KM397_10900 PF00905 Penicillin binding protein transpeptidase domain KM397_10900 PF03717 Penicillin-binding Protein dimerisation domain KM397_10900 PF05223 NTF2-like N-terminal transpeptidase domain KM397_10905 PF02525 Flavodoxin-like fold KM397_10910 PF01553 Acyltransferase KM397_10915 PF03006 Haemolysin-III related KM397_10920 PF02416 mttA/Hcf106 family KM397_10925 PF00902 Sec-independent protein translocase protein (TatC) KM397_10935 PF02645 Uncharacterised protein, DegV family COG1307 KM397_10945 PF02630 SCO1/SenC KM397_10950 PF00011 Hsp20/alpha crystallin family KM397_10955 PF00733 Asparagine synthase KM397_10955 PF13537 Glutamine amidotransferase domain KM397_10970 PF01497 Periplasmic binding protein KM397_10975 PF01063 Amino-transferase class IV KM397_10980 PF00881 Nitroreductase family KM397_11000 PF00293 NUDIX domain KM397_11005 PF00011 Hsp20/alpha crystallin family KM397_11010 PF00924 Mechanosensitive ion channel KM397_11015 PF07730 Histidine kinase KM397_11015 PF13185 GAF domain KM397_11020 PF00072 Response regulator receiver domain KM397_11020 PF00196 Bacterial regulatory proteins, luxR family KM397_11030 PF08240 Alcohol dehydrogenase GroES-like domain KM397_11030 PF00107 Zinc-binding dehydrogenase KM397_11055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM397_11055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM397_11060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM397_11060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM397_11075 PF03358 NADPH-dependent FMN reductase KM397_11090 PF00005 ABC transporter KM397_11090 PF00571 CBS domain KM397_11095 PF00528 Binding-protein-dependent transport system inner membrane component KM397_11100 PF13520 Amino acid permease KM397_11130 PF00571 CBS domain KM397_11130 PF03471 Transporter associated domain KM397_11130 PF01595 Cyclin M transmembrane N-terminal domain KM397_11135 PF00171 Aldehyde dehydrogenase family KM397_11140 PF07997 Protein of unknown function (DUF1694) KM397_11145 PF09385 Histidine kinase N terminal KM397_11155 PF00202 Aminotransferase class-III KM397_11160 PF01144 Coenzyme A transferase KM397_11165 PF01144 Coenzyme A transferase KM397_11170 PF01546 Peptidase family M20/M25/M40 KM397_11170 PF07687 Peptidase dimerisation domain KM397_11175 PF00583 Acetyltransferase (GNAT) family KM397_11180 PF02954 Bacterial regulatory protein, Fis family KM397_11180 PF13426 PAS domain KM397_11180 PF00158 Sigma-54 interaction domain KM397_11185 PF12544 Lysine-2,3-aminomutase KM397_11190 PF14122 YokU-like protein, putative antitoxin KM397_11195 PF06855 YozE SAM-like fold KM397_11210 PF14162 YozD-like protein KM397_11225 PF07070 SpoOM protein KM397_11230 PF01569 PAP2 superfamily KM397_11235 PF01545 Cation efflux family KM397_11235 PF16916 Dimerisation domain of Zinc Transporter KM397_11240 PF00085 Thioredoxin KM397_11255 PF14436 Bacterial EndoU nuclease KM397_11255 PF04740 LXG domain of WXG superfamily KM397_11260 PF03424 Carbohydrate binding domain (family 17/28) KM397_11260 PF00395 S-layer homology domain KM397_11260 PF00150 Cellulase (glycosyl hydrolase family 5) KM397_11270 PF04471 Restriction endonuclease KM397_11380 PF10676 Spore germination protein gerPA/gerPF KM397_11400 PF00912 Transglycosylase KM397_11400 PF00905 Penicillin binding protein transpeptidase domain KM397_11405 PF07690 Major Facilitator Superfamily KM397_11410 PF01521 Iron-sulphur cluster biosynthesis KM397_11415 PF00285 Citrate synthase, C-terminal domain KM397_11420 PF03972 MmgE/PrpD family KM397_11430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM397_11430 PF02770 Acyl-CoA dehydrogenase, middle domain KM397_11430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM397_11435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM397_11435 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM397_11440 PF00171 Aldehyde dehydrogenase family KM397_11445 PF01810 LysE type translocator KM397_11450 PF00378 Enoyl-CoA hydratase/isomerase KM397_11460 PF10763 Protein of unknown function (DUF2584) KM397_11465 PF00149 Calcineurin-like phosphoesterase KM397_11465 PF12320 Type 5 capsule protein repressor C-terminal domain KM397_11470 PF13476 AAA domain KM397_11480 PF01022 Bacterial regulatory protein, arsR family KM397_11490 PF07690 Major Facilitator Superfamily KM397_11495 PF00106 short chain dehydrogenase KM397_11500 PF00425 chorismate binding enzyme KM397_11505 PF13193 AMP-binding enzyme C-terminal domain KM397_11505 PF00501 AMP-binding enzyme KM397_11510 PF00857 Isochorismatase family KM397_11510 PF00550 Phosphopantetheine attachment site KM397_11515 PF00550 Phosphopantetheine attachment site KM397_11515 PF00501 AMP-binding enzyme KM397_11515 PF00975 Thioesterase domain KM397_11515 PF13193 AMP-binding enzyme C-terminal domain KM397_11515 PF00668 Condensation domain KM397_11520 PF03621 MbtH-like protein KM397_11525 PF07690 Major Facilitator Superfamily KM397_11540 PF00216 Bacterial DNA-binding protein KM397_11550 PF05163 DinB family KM397_11555 PF00082 Subtilase family KM397_11560 PF01235 Sodium:alanine symporter family KM397_11575 PF16291 Domain of unknown function (DUF4937 KM397_11580 PF00849 RNA pseudouridylate synthase KM397_11580 PF01479 S4 domain KM397_11585 PF03129 Anticodon binding domain KM397_11585 PF02824 TGS domain KM397_11585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM397_11585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM397_11600 PF12146 Serine aminopeptidase, S33 KM397_11605 PF07690 Major Facilitator Superfamily KM397_11625 PF13649 Methyltransferase domain KM397_11670 PF00753 Metallo-beta-lactamase superfamily KM397_11670 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM397_11680 PF03176 MMPL family KM397_11690 PF00302 Chloramphenicol acetyltransferase KM397_11705 PF00583 Acetyltransferase (GNAT) family KM397_11735 PF01593 Flavin containing amine oxidoreductase KM397_11745 PF13302 Acetyltransferase (GNAT) domain KM397_11755 PF00313 'Cold-shock' DNA-binding domain KM397_11820 PF03466 LysR substrate binding domain KM397_11820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM397_11825 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM397_11825 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM397_11840 PF03466 LysR substrate binding domain KM397_11840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM397_11845 PF03475 3-alpha domain KM397_11845 PF03473 MOSC domain KM397_11860 PF00005 ABC transporter KM397_11860 PF00664 ABC transporter transmembrane region KM397_11865 PF00005 ABC transporter KM397_11865 PF00664 ABC transporter transmembrane region KM397_11880 PF01810 LysE type translocator KM397_11885 PF01381 Helix-turn-helix KM397_11885 PF07883 Cupin domain KM397_11915 PF04542 Sigma-70 region 2 KM397_11915 PF12680 SnoaL-like domain KM397_11915 PF08281 Sigma-70, region 4 KM397_11940 PF02638 Glycosyl hydrolase-like 10 KM397_11950 PF02378 Phosphotransferase system, EIIC KM397_11960 PF03702 Anhydro-N-acetylmuramic acid kinase KM397_11965 PF01869 BadF/BadG/BcrA/BcrD ATPase family KM397_11970 PF02660 Glycerol-3-phosphate acyltransferase KM397_11975 PF00266 Aminotransferase class-V KM397_11980 PF00291 Pyridoxal-phosphate dependent enzyme KM397_11995 PF00753 Metallo-beta-lactamase superfamily KM397_11995 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM397_12010 PF00271 Helicase conserved C-terminal domain KM397_12010 PF00270 DEAD/DEAH box helicase KM397_12025 PF17932 Tetracyclin repressor-like, C-terminal domain KM397_12025 PF00440 Bacterial regulatory proteins, tetR family KM397_12040 PF00005 ABC transporter KM397_12040 PF02687 FtsX-like permease family KM397_12040 PF12704 MacB-like periplasmic core domain KM397_12045 PF03848 Tellurite resistance protein TehB KM397_12045 PF09313 Domain of unknown function (DUF1971) KM397_12055 PF08241 Methyltransferase domain KM397_12060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM397_12060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM397_12060 PF00205 Thiamine pyrophosphate enzyme, central domain KM397_12065 PF12802 MarR family KM397_12070 PF00300 Histidine phosphatase superfamily (branch 1) KM397_12075 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KM397_12105 PF01546 Peptidase family M20/M25/M40 KM397_12105 PF07687 Peptidase dimerisation domain KM397_12120 PF04542 Sigma-70 region 2 KM397_12120 PF08281 Sigma-70, region 4 KM397_12130 PF00905 Penicillin binding protein transpeptidase domain KM397_12130 PF03717 Penicillin-binding Protein dimerisation domain KM397_12145 PF01569 PAP2 superfamily KM397_12150 PF00356 Bacterial regulatory proteins, lacI family KM397_12155 PF07690 Major Facilitator Superfamily KM397_12160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM397_12160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM397_12165 PF00294 pfkB family carbohydrate kinase KM397_12170 PF00171 Aldehyde dehydrogenase family KM397_12175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM397_12175 PF00205 Thiamine pyrophosphate enzyme, central domain KM397_12175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM397_12185 PF01116 Fructose-bisphosphate aldolase class-II KM397_12190 PF04962 KduI/IolB family KM397_12215 PF18801 response regulator aspartate phosphatase H, N terminal KM397_12220 PF01381 Helix-turn-helix KM397_12235 PF02557 D-alanyl-D-alanine carboxypeptidase KM397_12245 PF01520 N-acetylmuramoyl-L-alanine amidase KM397_12245 PF00395 S-layer homology domain KM397_12255 PF00440 Bacterial regulatory proteins, tetR family KM397_12260 PF00005 ABC transporter KM397_12260 PF16326 ABC transporter C-terminal domain KM397_12270 PF00990 Diguanylate cyclase, GGDEF domain KM397_12270 PF00563 EAL domain KM397_12270 PF03707 Bacterial signalling protein N terminal repeat KM397_12275 PF13302 Acetyltransferase (GNAT) domain KM397_12290 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM397_12295 PF00581 Rhodanese-like domain KM397_12310 PF00005 ABC transporter KM397_12320 PF08359 YsiA-like protein, C-terminal region KM397_12320 PF00440 Bacterial regulatory proteins, tetR family KM397_12335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM397_12335 PF02770 Acyl-CoA dehydrogenase, middle domain KM397_12335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM397_12340 PF00289 Biotin carboxylase, N-terminal domain KM397_12340 PF02785 Biotin carboxylase C-terminal domain KM397_12340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM397_12345 PF00364 Biotin-requiring enzyme KM397_12350 PF00682 HMGL-like KM397_12355 PF00378 Enoyl-CoA hydratase/isomerase KM397_12360 PF01039 Carboxyl transferase domain KM397_12365 PF13193 AMP-binding enzyme C-terminal domain KM397_12365 PF00501 AMP-binding enzyme KM397_12365 PF16177 Acetyl-coenzyme A synthetase N-terminus KM397_12375 PF00583 Acetyltransferase (GNAT) family KM397_12380 PF00485 Phosphoribulokinase / Uridine kinase family KM397_12390 PF05163 DinB family KM397_12395 PF00768 D-alanyl-D-alanine carboxypeptidase KM397_12395 PF07943 Penicillin-binding protein 5, C-terminal domain KM397_12400 PF00512 His Kinase A (phospho-acceptor) domain KM397_12400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_12405 PF00072 Response regulator receiver domain KM397_12405 PF00486 Transcriptional regulatory protein, C terminal KM397_12410 PF01966 HD domain KM397_12415 PF13021 Domain of unknown function (DUF3885) KM397_12420 PF01048 Phosphorylase superfamily KM397_12460 PF17755 UvrA DNA-binding domain KM397_12460 PF17760 UvrA interaction domain KM397_12460 PF17755 UvrA DNA-binding domain KM397_12460 PF17760 UvrA interaction domain KM397_12480 PF09278 MerR, DNA binding KM397_12480 PF00376 MerR family regulatory protein KM397_12485 PF07690 Major Facilitator Superfamily KM397_12505 PF01636 Phosphotransferase enzyme family KM397_12525 PF00392 Bacterial regulatory proteins, gntR family KM397_12525 PF00155 Aminotransferase class I and II KM397_12540 PF08240 Alcohol dehydrogenase GroES-like domain KM397_12540 PF00107 Zinc-binding dehydrogenase KM397_12570 PF07486 Cell Wall Hydrolase KM397_12580 PF00486 Transcriptional regulatory protein, C terminal KM397_12580 PF00072 Response regulator receiver domain KM397_12610 PF00005 ABC transporter KM397_12635 PF03447 Homoserine dehydrogenase, NAD binding domain KM397_12635 PF00742 Homoserine dehydrogenase KM397_12635 PF01842 ACT domain KM397_12640 PF00155 Aminotransferase class I and II KM397_12640 PF00392 Bacterial regulatory proteins, gntR family KM397_12645 PF07478 D-ala D-ala ligase C-terminus KM397_12645 PF01820 D-ala D-ala ligase N-terminus KM397_12650 PF03070 TENA/THI-4/PQQC family KM397_12715 PF00067 Cytochrome P450 KM397_12725 PF00132 Bacterial transferase hexapeptide (six repeats) KM397_12730 PF07561 Domain of Unknown Function (DUF1540) KM397_12740 PF00067 Cytochrome P450 KM397_12760 PF13426 PAS domain KM397_12760 PF13188 PAS domain KM397_12760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_12760 PF00512 His Kinase A (phospho-acceptor) domain KM397_12760 PF00989 PAS fold KM397_12765 PF03717 Penicillin-binding Protein dimerisation domain KM397_12765 PF00905 Penicillin binding protein transpeptidase domain KM397_12770 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM397_12775 PF01177 Asp/Glu/Hydantoin racemase KM397_12780 PF07155 ECF-type riboflavin transporter, S component KM397_12785 PF00005 ABC transporter KM397_12785 PF12558 ATP-binding cassette cobalt transporter KM397_12810 PF04229 GrpB protein KM397_12815 PF08240 Alcohol dehydrogenase GroES-like domain KM397_12815 PF00107 Zinc-binding dehydrogenase KM397_12820 PF03717 Penicillin-binding Protein dimerisation domain KM397_12820 PF00905 Penicillin binding protein transpeptidase domain KM397_12820 PF03793 PASTA domain KM397_12830 PF00144 Beta-lactamase KM397_12830 PF11954 Domain of unknown function (DUF3471) KM397_12865 PF01965 DJ-1/PfpI family KM397_12880 PF00144 Beta-lactamase KM397_12895 PF07690 Major Facilitator Superfamily KM397_12910 PF03009 Glycerophosphoryl diester phosphodiesterase family KM397_12930 PF00892 EamA-like transporter family KM397_12935 PF01270 Glycosyl hydrolases family 8 KM397_12945 PF00293 NUDIX domain KM397_12955 PF00144 Beta-lactamase KM397_12965 PF07690 Major Facilitator Superfamily KM397_12980 PF09297 NADH pyrophosphatase zinc ribbon domain KM397_12980 PF00293 NUDIX domain KM397_12985 PF00712 DNA polymerase III beta subunit, N-terminal domain KM397_12985 PF02767 DNA polymerase III beta subunit, central domain KM397_12985 PF02768 DNA polymerase III beta subunit, C-terminal domain KM397_12990 PF00293 NUDIX domain KM397_13005 PF12706 Beta-lactamase superfamily domain KM397_13025 PF09234 Domain of unknown function (DUF1963) KM397_13050 PF08000 Bacterial PH domain KM397_13060 PF12867 DinB superfamily KM397_13075 PF02673 Bacitracin resistance protein BacA KM397_13085 PF01541 GIY-YIG catalytic domain KM397_13125 PF01266 FAD dependent oxidoreductase KM397_13150 PF13419 Haloacid dehalogenase-like hydrolase KM397_13170 PF00282 Pyridoxal-dependent decarboxylase conserved domain KM397_13175 PF00501 AMP-binding enzyme KM397_13175 PF13193 AMP-binding enzyme C-terminal domain KM397_13175 PF00668 Condensation domain KM397_13175 PF00550 Phosphopantetheine attachment site KM397_13190 PF01447 Thermolysin metallopeptidase, catalytic domain KM397_13190 PF07504 Fungalysin/Thermolysin Propeptide Motif KM397_13190 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM397_13190 PF03413 Peptidase propeptide and YPEB domain KM397_13210 PF00344 SecY translocase KM397_13215 PF00308 Bacterial dnaA protein KM397_13215 PF08299 Bacterial dnaA protein helix-turn-helix KM397_13215 PF11638 DnaA N-terminal domain KM397_13220 PF00892 EamA-like transporter family KM397_13225 PF00155 Aminotransferase class I and II KM397_13225 PF00392 Bacterial regulatory proteins, gntR family KM397_13230 PF00561 alpha/beta hydrolase fold KM397_13255 PF06081 Aromatic acid exporter family member 1 KM397_13270 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM397_13275 PF03413 Peptidase propeptide and YPEB domain KM397_13275 PF14620 YpeB sporulation KM397_13280 PF07486 Cell Wall Hydrolase KM397_13280 PF01471 Putative peptidoglycan binding domain KM397_13295 PF03301 Tryptophan 2,3-dioxygenase KM397_13300 PF04199 Putative cyclase KM397_13305 PF00266 Aminotransferase class-V KM397_13310 PF08359 YsiA-like protein, C-terminal region KM397_13310 PF00440 Bacterial regulatory proteins, tetR family KM397_13315 PF13344 Haloacid dehalogenase-like hydrolase KM397_13315 PF00293 NUDIX domain KM397_13340 PF01590 GAF domain KM397_13340 PF02954 Bacterial regulatory protein, Fis family KM397_13340 PF00158 Sigma-54 interaction domain KM397_13355 PF13302 Acetyltransferase (GNAT) domain KM397_13360 PF08220 DeoR-like helix-turn-helix domain KM397_13360 PF00455 DeoR C terminal sensor domain KM397_13380 PF02082 Transcriptional regulator KM397_13395 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM397_13395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM397_13400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM397_13400 PF00364 Biotin-requiring enzyme KM397_13400 PF02817 e3 binding domain KM397_13405 PF02779 Transketolase, pyrimidine binding domain KM397_13405 PF02780 Transketolase, C-terminal domain KM397_13410 PF00676 Dehydrogenase E1 component KM397_13420 PF00106 short chain dehydrogenase KM397_13425 PF04229 GrpB protein KM397_13425 PF13673 Acetyltransferase (GNAT) domain KM397_13455 PF00528 Binding-protein-dependent transport system inner membrane component KM397_13460 PF00005 ABC transporter KM397_13460 PF00571 CBS domain KM397_13465 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KM397_13470 PF00574 Clp protease KM397_13485 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KM397_13490 PF13673 Acetyltransferase (GNAT) domain KM397_13495 PF18416 N-acetylglucosamine binding protein domain 2 KM397_13495 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM397_13510 PF10990 Protein of unknown function (DUF2809) KM397_13535 PF13567 Domain of unknown function (DUF4131) KM397_13535 PF03772 Competence protein KM397_13535 PF00753 Metallo-beta-lactamase superfamily KM397_13585 PF13538 UvrD-like helicase C-terminal domain KM397_13600 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KM397_13605 PF00270 DEAD/DEAH box helicase KM397_13605 PF00271 Helicase conserved C-terminal domain KM397_13605 PF00570 HRDC domain KM397_13605 PF16124 RecQ zinc-binding KM397_13605 PF09382 RQC domain KM397_13645 PF02833 DHHA2 domain KM397_13645 PF01368 DHH family KM397_13650 PF18416 N-acetylglucosamine binding protein domain 2 KM397_13650 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM397_13665 PF02627 Carboxymuconolactone decarboxylase family KM397_13670 PF01235 Sodium:alanine symporter family KM397_13675 PF00171 Aldehyde dehydrogenase family KM397_13680 PF00701 Dihydrodipicolinate synthetase family KM397_13685 PF05544 Proline racemase KM397_13690 PF05544 Proline racemase KM397_13695 PF01266 FAD dependent oxidoreductase KM397_13700 PF00158 Sigma-54 interaction domain KM397_13700 PF02954 Bacterial regulatory protein, Fis family KM397_13700 PF13188 PAS domain KM397_13715 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM397_13715 PF04324 BFD-like [2Fe-2S] binding domain KM397_13730 PF08876 Domain of unknown function (DUF1836) KM397_13735 PF09335 SNARE associated Golgi protein KM397_13750 PF04914 DltD protein KM397_13755 PF13673 Acetyltransferase (GNAT) domain KM397_13755 PF13302 Acetyltransferase (GNAT) domain KM397_13755 PF03352 Methyladenine glycosylase KM397_13755 PF00117 Glutamine amidotransferase class-I KM397_13755 PF00958 GMP synthase C terminal domain KM397_13760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_13765 PF00877 NlpC/P60 family KM397_13765 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain KM397_13770 PF13378 Enolase C-terminal domain-like KM397_13770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM397_13790 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM397_13815 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KM397_13815 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KM397_13820 PF00989 PAS fold KM397_13820 PF16736 Single Cache-like KM397_13820 PF00512 His Kinase A (phospho-acceptor) domain KM397_13820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_13845 PF01048 Phosphorylase superfamily KM397_13855 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM397_13860 PF08439 Oligopeptidase F KM397_13860 PF01432 Peptidase family M3 KM397_13875 PF02645 Uncharacterised protein, DegV family COG1307 KM397_13895 PF07690 Major Facilitator Superfamily KM397_13905 PF04519 Polymer-forming cytoskeletal KM397_13910 PF13171 Protein of unknown function (DUF4004) KM397_13915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_13915 PF12793 Sugar transport-related sRNA regulator N-term KM397_13920 PF07690 Major Facilitator Superfamily KM397_13940 PF04226 Transglycosylase associated protein KM397_13945 PF01156 Inosine-uridine preferring nucleoside hydrolase KM397_13955 PF08241 Methyltransferase domain KM397_13990 PF00155 Aminotransferase class I and II KM397_13995 PF07977 FabA-like domain KM397_14000 PF03630 Fumble KM397_14065 PF01594 AI-2E family transporter KM397_14075 PF00296 Luciferase-like monooxygenase KM397_14080 PF00528 Binding-protein-dependent transport system inner membrane component KM397_14085 PF09084 NMT1/THI5 like KM397_14090 PF00005 ABC transporter KM397_14110 PF00293 NUDIX domain KM397_14110 PF09297 NADH pyrophosphatase zinc ribbon domain KM397_14130 PF02522 Aminoglycoside 3-N-acetyltransferase KM397_14155 PF13536 Putative multidrug resistance efflux transporter KM397_14160 PF12867 DinB superfamily KM397_14180 PF08713 DNA alkylation repair enzyme KM397_14190 PF01522 Polysaccharide deacetylase KM397_14200 PF03741 Integral membrane protein TerC family KM397_14205 PF00884 Sulfatase KM397_14210 PF00005 ABC transporter KM397_14210 PF12848 ABC transporter KM397_14220 PF03176 MMPL family KM397_14225 PF03176 MMPL family KM397_14230 PF03176 MMPL family KM397_14235 PF16295 Tetracyclin repressor-like, C-terminal domain KM397_14235 PF00440 Bacterial regulatory proteins, tetR family KM397_14245 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM397_14250 PF02153 Prephenate dehydrogenase KM397_14250 PF01842 ACT domain KM397_14255 PF00155 Aminotransferase class I and II KM397_14260 PF01264 Chorismate synthase KM397_14265 PF00793 DAHP synthetase I family KM397_14265 PF01817 Chorismate mutase type II KM397_14285 PF01636 Phosphotransferase enzyme family KM397_14300 PF01476 LysM domain KM397_14300 PF06725 3D domain KM397_14310 PF04542 Sigma-70 region 2 KM397_14310 PF08281 Sigma-70, region 4 KM397_14330 PF06039 Malate:quinone oxidoreductase (Mqo) KM397_14335 PF13407 Periplasmic binding protein domain KM397_14340 PF02653 Branched-chain amino acid transport system / permease component KM397_14345 PF02653 Branched-chain amino acid transport system / permease component KM397_14350 PF00005 ABC transporter KM397_14355 PF04198 Putative sugar-binding domain KM397_14355 PF00325 Bacterial regulatory proteins, crp family KM397_14370 PF01791 DeoC/LacD family aldolase KM397_14390 PF03992 Antibiotic biosynthesis monooxygenase KM397_14410 PF07662 Na+ dependent nucleoside transporter C-terminus KM397_14410 PF01773 Na+ dependent nucleoside transporter N-terminus KM397_14415 PF00171 Aldehyde dehydrogenase family KM397_14420 PF00696 Amino acid kinase family KM397_14420 PF01472 PUA domain KM397_14425 PF03807 NADP oxidoreductase coenzyme F420-dependent KM397_14425 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM397_14430 PF01546 Peptidase family M20/M25/M40 KM397_14435 PF09339 IclR helix-turn-helix domain KM397_14435 PF01614 Bacterial transcriptional regulator KM397_14440 PF00324 Amino acid permease KM397_14445 PF01139 tRNA-splicing ligase RtcB KM397_14450 PF00487 Fatty acid desaturase KM397_14455 PF00245 Alkaline phosphatase KM397_14460 PF11188 Protein of unknown function (DUF2975) KM397_14465 PF13443 Cro/C1-type HTH DNA-binding domain KM397_14480 PF10086 YhfC intramembrane metalloprotease KM397_14490 PF00072 Response regulator receiver domain KM397_14490 PF04397 LytTr DNA-binding domain KM397_14500 PF13302 Acetyltransferase (GNAT) domain KM397_14505 PF12681 Glyoxalase-like domain KM397_14525 PF07726 ATPase family associated with various cellular activities (AAA) KM397_14525 PF17863 AAA lid domain KM397_14540 PF07690 Major Facilitator Superfamily KM397_14550 PF00535 Glycosyl transferase family 2 KM397_14565 PF00535 Glycosyl transferase family 2 KM397_14575 PF00535 Glycosyl transferase family 2 KM397_14585 PF00202 Aminotransferase class-III KM397_14590 PF00199 Catalase KM397_14590 PF06628 Catalase-related immune-responsive KM397_14600 PF01979 Amidohydrolase family KM397_14600 PF13382 Adenine deaminase C-terminal domain KM397_14605 PF00144 Beta-lactamase KM397_14625 PF17863 AAA lid domain KM397_14625 PF07726 ATPase family associated with various cellular activities (AAA) KM397_14635 PF00881 Nitroreductase family KM397_14640 PF01047 MarR family KM397_14645 PF00009 Elongation factor Tu GTP binding domain KM397_14645 PF00679 Elongation factor G C-terminus KM397_14645 PF14492 Elongation Factor G, domain II KM397_14645 PF03764 Elongation factor G, domain IV KM397_14655 PF00293 NUDIX domain KM397_14670 PF00005 ABC transporter KM397_14675 PF00392 Bacterial regulatory proteins, gntR family KM397_14685 PF02687 FtsX-like permease family KM397_14685 PF12704 MacB-like periplasmic core domain KM397_14685 PF00005 ABC transporter KM397_14710 PF12833 Helix-turn-helix domain KM397_14715 PF00583 Acetyltransferase (GNAT) family KM397_14730 PF00892 EamA-like transporter family KM397_14735 PF00392 Bacterial regulatory proteins, gntR family KM397_14735 PF00155 Aminotransferase class I and II KM397_14740 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KM397_14745 PF13031 Protein of unknown function (DUF3892) KM397_14755 PF00672 HAMP domain KM397_14755 PF00512 His Kinase A (phospho-acceptor) domain KM397_14760 PF00072 Response regulator receiver domain KM397_14760 PF00486 Transcriptional regulatory protein, C terminal KM397_14765 PF00561 alpha/beta hydrolase fold KM397_14795 PF01925 Sulfite exporter TauE/SafE KM397_14800 PF13302 Acetyltransferase (GNAT) domain KM397_14805 PF00324 Amino acid permease KM397_14815 PF08713 DNA alkylation repair enzyme KM397_14820 PF10898 Protein of unknown function (DUF2716) KM397_14840 PF00293 NUDIX domain KM397_14850 PF10502 Signal peptidase, peptidase S26 KM397_14855 PF00905 Penicillin binding protein transpeptidase domain KM397_14855 PF03717 Penicillin-binding Protein dimerisation domain KM397_14865 PF02146 Sir2 family KM397_14870 PF01470 Pyroglutamyl peptidase KM397_14890 PF03746 LamB/YcsF family KM397_14895 PF02626 Carboxyltransferase domain, subdomain A and B KM397_14900 PF02682 Carboxyltransferase domain, subdomain C and D KM397_14905 PF09339 IclR helix-turn-helix domain KM397_14905 PF01614 Bacterial transcriptional regulator KM397_14910 PF10502 Signal peptidase, peptidase S26 KM397_14915 PF03932 CutC family KM397_14920 PF07454 Stage II sporulation protein P (SpoIIP) KM397_14935 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KM397_14935 PF02770 Acyl-CoA dehydrogenase, middle domain KM397_14935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM397_14950 PF07670 Nucleoside recognition KM397_14965 PF02915 Rubrerythrin KM397_14975 PF00440 Bacterial regulatory proteins, tetR family KM397_14980 PF00391 PEP-utilising enzyme, mobile domain KM397_14980 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KM397_14985 PF00753 Metallo-beta-lactamase superfamily KM397_15000 PF07875 Coat F domain KM397_15005 PF08892 YqcI/YcgG family KM397_15010 PF01810 LysE type translocator KM397_15025 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM397_15030 PF10710 Protein of unknown function (DUF2512) KM397_15035 PF11553 Protein of unknown function (DUF3231) KM397_15040 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM397_15045 PF13823 Alcohol dehydrogenase GroES-associated KM397_15045 PF00107 Zinc-binding dehydrogenase KM397_15045 PF08240 Alcohol dehydrogenase GroES-like domain KM397_15060 PF00206 Lyase KM397_15060 PF10415 Fumarase C C-terminus KM397_15065 PF17763 Glutaminase/Asparaginase C-terminal domain KM397_15065 PF00710 Asparaginase, N-terminal KM397_15070 PF01381 Helix-turn-helix KM397_15080 PF12826 Helix-hairpin-helix motif KM397_15080 PF08459 UvrC Helix-hairpin-helix N-terminal KM397_15080 PF01541 GIY-YIG catalytic domain KM397_15080 PF02151 UvrB/uvrC motif KM397_15085 PF13520 Amino acid permease KM397_15090 PF05525 Branched-chain amino acid transport protein KM397_15095 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM397_15095 PF03807 NADP oxidoreductase coenzyme F420-dependent KM397_15100 PF13564 DoxX-like family KM397_15105 PF00390 Malic enzyme, N-terminal domain KM397_15105 PF03949 Malic enzyme, NAD binding domain KM397_15120 PF03845 Spore germination protein KM397_15130 PF08664 YcbB domain KM397_15130 PF00072 Response regulator receiver domain KM397_15140 PF04960 Glutaminase KM397_15145 PF01235 Sodium:alanine symporter family KM397_15175 PF17936 Bacterial Ig domain KM397_15175 PF02872 5'-nucleotidase, C-terminal domain KM397_15175 PF00149 Calcineurin-like phosphoesterase KM397_15180 PF00199 Catalase KM397_15180 PF06628 Catalase-related immune-responsive KM397_15185 PF00561 alpha/beta hydrolase fold KM397_15190 PF00857 Isochorismatase family KM397_15210 PF03466 LysR substrate binding domain KM397_15210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM397_15215 PF01047 MarR family KM397_15235 PF11181 Heat induced stress protein YflT KM397_15250 PF03073 TspO/MBR family KM397_15255 PF00875 DNA photolyase KM397_15255 PF03441 FAD binding domain of DNA photolyase KM397_15265 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KM397_15270 PF00361 Proton-conducting membrane transporter KM397_15270 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM397_15275 PF10057 Uncharacterized conserved protein (DUF2294) KM397_15290 PF01040 UbiA prenyltransferase family KM397_15295 PF00561 alpha/beta hydrolase fold KM397_15300 PF01297 Zinc-uptake complex component A periplasmic KM397_15305 PF00950 ABC 3 transport family KM397_15310 PF00005 ABC transporter KM397_15335 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM397_15340 PF01758 Sodium Bile acid symporter family KM397_15345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM397_15350 PF01022 Bacterial regulatory protein, arsR family KM397_15365 PF00012 Hsp70 protein KM397_15380 PF01037 Lrp/AsnC ligand binding domain KM397_15395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM397_15420 PF02805 Metal binding domain of Ada KM397_15420 PF12833 Helix-turn-helix domain KM397_15430 PF00144 Beta-lactamase KM397_15455 PF12802 MarR family KM397_15460 PF00067 Cytochrome P450 KM397_15460 PF00175 Oxidoreductase NAD-binding domain KM397_15460 PF00667 FAD binding domain KM397_15460 PF00258 Flavodoxin KM397_15465 PF07690 Major Facilitator Superfamily KM397_15490 PF00072 Response regulator receiver domain KM397_15490 PF00486 Transcriptional regulatory protein, C terminal KM397_15495 PF00672 HAMP domain KM397_15495 PF00512 His Kinase A (phospho-acceptor) domain KM397_15495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_15520 PF00291 Pyridoxal-phosphate dependent enzyme KM397_15540 PF01381 Helix-turn-helix KM397_15555 PF00753 Metallo-beta-lactamase superfamily KM397_15560 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM397_15570 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM397_15570 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM397_15575 PF04072 Leucine carboxyl methyltransferase KM397_15590 PF00005 ABC transporter KM397_15595 PF02687 FtsX-like permease family KM397_15610 PF00672 HAMP domain KM397_15610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_15610 PF00512 His Kinase A (phospho-acceptor) domain KM397_15615 PF00072 Response regulator receiver domain KM397_15615 PF00486 Transcriptional regulatory protein, C terminal KM397_15625 PF01047 MarR family KM397_15635 PF04299 Putative FMN-binding domain KM397_15640 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM397_15640 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM397_15645 PF07690 Major Facilitator Superfamily KM397_15650 PF02589 LUD domain KM397_15655 PF11870 Domain of unknown function (DUF3390) KM397_15655 PF13183 4Fe-4S dicluster domain KM397_15655 PF02589 LUD domain KM397_15660 PF02754 Cysteine-rich domain KM397_15665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM397_15665 PF03466 LysR substrate binding domain KM397_15675 PF17676 LD-carboxypeptidase C-terminal domain KM397_15675 PF02016 LD-carboxypeptidase N-terminal domain KM397_15695 PF07690 Major Facilitator Superfamily KM397_15700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM397_15700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM397_15705 PF05116 Sucrose-6F-phosphate phosphohydrolase KM397_15715 PF00356 Bacterial regulatory proteins, lacI family KM397_15720 PF18801 response regulator aspartate phosphatase H, N terminal KM397_15740 PF00817 impB/mucB/samB family KM397_15740 PF11799 impB/mucB/samB family C-terminal domain KM397_15740 PF11798 IMS family HHH motif KM397_15755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM397_15755 PF00672 HAMP domain KM397_15755 PF02743 Cache domain KM397_15770 PF01554 MatE KM397_15780 PF08453 Peptidase family M9 N-terminal KM397_15780 PF18496 Collagenase G catalytic helper subdomain KM397_15780 PF01752 Collagenase KM397_15790 PF07690 Major Facilitator Superfamily KM397_15795 PF16859 Tetracyclin repressor-like, C-terminal domain KM397_15795 PF00440 Bacterial regulatory proteins, tetR family KM397_15805 PF01022 Bacterial regulatory protein, arsR family KM397_15815 PF03313 Serine dehydratase alpha chain KM397_15820 PF03315 Serine dehydratase beta chain KM397_15820 PF01842 ACT domain KM397_15830 PF00202 Aminotransferase class-III KM397_15835 PF07503 HypF finger KM397_15835 PF01300 Telomere recombination KM397_15835 PF17788 HypF Kae1-like domain KM397_15835 PF00708 Acylphosphatase KM397_15840 PF00586 AIR synthase related protein, N-terminal domain KM397_15840 PF02769 AIR synthase related protein, C-terminal domain KM397_15845 PF00857 Isochorismatase family KM397_15850 PF01037 Lrp/AsnC ligand binding domain KM397_15855 PF13520 Amino acid permease KM397_15870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM397_15870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM397_15870 PF01842 ACT domain KM397_15875 PF00266 Aminotransferase class-V KM397_15890 PF04542 Sigma-70 region 2 KM397_15890 PF08281 Sigma-70, region 4 KM397_15905 PF07883 Cupin domain KM397_15910 PF12833 Helix-turn-helix domain KM397_15910 PF01497 Periplasmic binding protein KM397_15915 PF01804 Penicillin amidase KM397_15955 PF14044 NETI protein KM397_15960 PF07690 Major Facilitator Superfamily KM397_15965 PF12697 Alpha/beta hydrolase family KM397_15970 PF01047 MarR family KM397_15975 PF07690 Major Facilitator Superfamily KM397_15985 PF12679 ABC-2 family transporter protein KM397_15990 PF00005 ABC transporter KM397_15990 PF13732 Domain of unknown function (DUF4162) KM397_15995 PF13396 Phospholipase_D-nuclease N-terminal KM397_16005 PF17314 Family of unknown function (DUF5360) KM397_16010 PF00893 Small Multidrug Resistance protein KM397_16015 PF00440 Bacterial regulatory proteins, tetR family KM397_16020 PF01289 Thiol-activated cytolysin KM397_16020 PF17440 Thiol-activated cytolysin beta sandwich domain KM397_16025 PF02667 Short chain fatty acid transporter KM397_16035 PF02525 Flavodoxin-like fold KM397_16055 PF14256 YwiC-like protein KM397_16065 PF00005 ABC transporter KM397_16070 PF02361 Cobalt transport protein KM397_16085 PF03737 Aldolase/RraA KM397_16090 PF03606 C4-dicarboxylate anaerobic carrier KM397_16095 PF04231 Endonuclease I KM397_16110 PF01381 Helix-turn-helix KM397_16115 PF02660 Glycerol-3-phosphate acyltransferase KM397_16120 PF04073 Aminoacyl-tRNA editing domain KM397_16125 PF03129 Anticodon binding domain KM397_16125 PF13393 Histidyl-tRNA synthetase KM397_16140 PF01638 HxlR-like helix-turn-helix KM397_16145 PF00881 Nitroreductase family KM397_16155 PF00391 PEP-utilising enzyme, mobile domain KM397_16155 PF00224 Pyruvate kinase, barrel domain KM397_16155 PF02887 Pyruvate kinase, alpha/beta domain KM397_16175 PF00005 ABC transporter KM397_16200 PF13419 Haloacid dehalogenase-like hydrolase KM397_16210 PF13350 Tyrosine phosphatase family KM397_16235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM397_16240 PF00480 ROK family KM397_16245 PF07690 Major Facilitator Superfamily KM397_16250 PF14602 Hexapeptide repeat of succinyl-transferase KM397_16250 PF12464 Maltose acetyltransferase KM397_16260 PF00005 ABC transporter KM397_16260 PF02687 FtsX-like permease family KM397_16260 PF12704 MacB-like periplasmic core domain KM397_16270 PF00579 tRNA synthetases class I (W and Y) KM397_16275 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM397_16275 PF13288 DXP reductoisomerase C-terminal domain KM397_16275 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM397_16280 PF01594 AI-2E family transporter KM397_16300 PF08241 Methyltransferase domain KM397_16310 PF07690 Major Facilitator Superfamily KM397_16330 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM397_16340 PF00571 CBS domain KM397_16340 PF03471 Transporter associated domain KM397_16340 PF01595 Cyclin M transmembrane N-terminal domain KM397_16345 PF13411 MerR HTH family regulatory protein KM397_16350 PF00892 EamA-like transporter family KM397_16355 PF00805 Pentapeptide repeats (8 copies) KM397_16360 PF06906 Protein of unknown function (DUF1272) KM397_16365 PF10282 Lactonase, 7-bladed beta-propeller KM397_16370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM397_16370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM397_16375 PF02447 GntP family permease KM397_16380 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM397_16390 PF02779 Transketolase, pyrimidine binding domain KM397_16390 PF02780 Transketolase, C-terminal domain KM397_16390 PF00456 Transketolase, thiamine diphosphate binding domain KM397_16395 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM397_16395 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM397_16400 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM397_16400 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM397_16405 PF08240 Alcohol dehydrogenase GroES-like domain KM397_16405 PF00107 Zinc-binding dehydrogenase KM397_16410 PF00296 Luciferase-like monooxygenase KM397_16420 PF14765 Polyketide synthase dehydratase KM397_16420 PF08659 KR domain KM397_16420 PF02801 Beta-ketoacyl synthase, C-terminal domain KM397_16420 PF00550 Phosphopantetheine attachment site KM397_16420 PF08240 Alcohol dehydrogenase GroES-like domain KM397_16420 PF00698 Acyl transferase domain KM397_16420 PF00109 Beta-ketoacyl synthase, N-terminal domain KM397_16420 PF16197 Ketoacyl-synthetase C-terminal extension KM397_16425 PF00106 short chain dehydrogenase KM397_16430 PF07504 Fungalysin/Thermolysin Propeptide Motif KM397_16430 PF03413 Peptidase propeptide and YPEB domain KM397_16430 PF01447 Thermolysin metallopeptidase, catalytic domain KM397_16430 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM397_16450 PF00248 Aldo/keto reductase family KM397_16455 PF07690 Major Facilitator Superfamily KM397_16465 PF03928 Haem-degrading KM397_16470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM397_16500 PF03960 ArsC family KM397_16505 PF01638 HxlR-like helix-turn-helix KM397_16510 PF07702 UTRA domain KM397_16510 PF00392 Bacterial regulatory proteins, gntR family KM397_16525 PF01638 HxlR-like helix-turn-helix KM397_16530 PF01638 HxlR-like helix-turn-helix KM397_16535 PF00248 Aldo/keto reductase family KM397_16565 PF02567 Phenazine biosynthesis-like protein KM397_16585 PF00501 AMP-binding enzyme KM397_16585 PF13193 AMP-binding enzyme C-terminal domain KM397_16595 PF01638 HxlR-like helix-turn-helix KM397_16615 PF01022 Bacterial regulatory protein, arsR family KM397_16625 PF12791 Anti-sigma factor N-terminus KM397_16630 PF04542 Sigma-70 region 2 KM397_16645 PF00440 Bacterial regulatory proteins, tetR family KM397_16665 PF05656 Protein of unknown function (DUF805) KM397_16670 PF01061 ABC-2 type transporter KM397_16675 PF00005 ABC transporter KM397_16675 PF13732 Domain of unknown function (DUF4162) KM397_16690 PF03063 Prismane/CO dehydrogenase family KM397_16700 PF00753 Metallo-beta-lactamase superfamily KM397_16705 PF01471 Putative peptidoglycan binding domain KM397_16705 PF01183 Glycosyl hydrolases family 25 KM397_16730 PF00144 Beta-lactamase KM397_16770 PF00753 Metallo-beta-lactamase superfamily KM397_16775 PF08240 Alcohol dehydrogenase GroES-like domain KM397_16775 PF00107 Zinc-binding dehydrogenase KM397_16780 PF00324 Amino acid permease KM397_16785 PF07690 Major Facilitator Superfamily KM397_16810 PF02585 GlcNAc-PI de-N-acetylase KM397_16815 PF08830 Protein of unknown function (DUF1806) KM397_16820 PF03600 Citrate transporter KM397_16840 PF01497 Periplasmic binding protein KM397_16845 PF01032 FecCD transport family KM397_16850 PF01032 FecCD transport family KM397_16855 PF05675 Protein of unknown function (DUF817) KM397_16860 PF02567 Phenazine biosynthesis-like protein KM397_16865 PF13170 Protein of unknown function (DUF4003) KM397_16880 PF10901 Protein of unknown function (DUF2690) KM397_16890 PF03466 LysR substrate binding domain KM397_16890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM397_16895 PF00107 Zinc-binding dehydrogenase KM397_16895 PF08240 Alcohol dehydrogenase GroES-like domain KM397_16910 PF00488 MutS domain V KM397_16910 PF01713 Smr domain KM397_16920 PF09154 Domain of unknown function (DUF1939) KM397_16920 PF00128 Alpha amylase, catalytic domain KM397_16930 PF01432 Peptidase family M3 KM397_16930 PF08439 Oligopeptidase F KM397_16935 PF00144 Beta-lactamase KM397_16945 PF07690 Major Facilitator Superfamily KM397_16950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM397_16950 PF03466 LysR substrate binding domain KM397_16965 PF03009 Glycerophosphoryl diester phosphodiesterase family KM397_16985 PF01494 FAD binding domain KM397_16990 PF01022 Bacterial regulatory protein, arsR family KM397_16995 PF08240 Alcohol dehydrogenase GroES-like domain KM397_16995 PF00107 Zinc-binding dehydrogenase KM397_17000 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KM397_17015 PF04299 Putative FMN-binding domain KM397_17020 PF04229 GrpB protein KM397_17030 PF01758 Sodium Bile acid symporter family KM397_17035 PF01565 FAD binding domain KM397_17035 PF02913 FAD linked oxidases, C-terminal domain KM397_17055 PF00132 Bacterial transferase hexapeptide (six repeats) KM397_17060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM397_17065 PF00535 Glycosyl transferase family 2 KM397_17070 PF00378 Enoyl-CoA hydratase/isomerase KM397_17075 PF01752 Collagenase KM397_17075 PF08453 Peptidase family M9 N-terminal KM397_17075 PF18496 Collagenase G catalytic helper subdomain KM397_17080 PF02308 MgtC family KM397_17095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM397_17100 PF04294 VanW like protein KM397_17110 PF13039 Protein of unknown function (DUF3900) KM397_17110 PF13037 Domain of unknown function (DUF3898) KM397_17130 PF00313 'Cold-shock' DNA-binding domain KM397_17140 PF00258 Flavodoxin KM397_17150 PF00293 NUDIX domain KM397_17160 PF00132 Bacterial transferase hexapeptide (six repeats) KM397_17170 PF00106 short chain dehydrogenase KM397_17180 PF14698 Argininosuccinate lyase C-terminal KM397_17180 PF00206 Lyase KM397_17190 PF01156 Inosine-uridine preferring nucleoside hydrolase KM397_17195 PF00474 Sodium:solute symporter family KM397_17205 PF00171 Aldehyde dehydrogenase family KM397_17215 PF14151 YfhD-like protein KM397_17220 PF13249 Squalene-hopene cyclase N-terminal domain KM397_17220 PF13243 Squalene-hopene cyclase C-terminal domain KM397_17225 PF02681 Divergent PAP2 family KM397_17230 PF00892 EamA-like transporter family KM397_17235 PF06961 Protein of unknown function (DUF1294) KM397_17250 PF10609 NUBPL iron-transfer P-loop NTPase KM397_17260 PF02391 MoaE protein KM397_17265 PF03453 MoeA N-terminal region (domain I and II) KM397_17265 PF03454 MoeA C-terminal region (domain IV) KM397_17265 PF00994 Probable molybdopterin binding domain KM397_17270 PF00899 ThiF family KM397_17275 PF01226 Formate/nitrite transporter KM397_17280 PF04055 Radical SAM superfamily KM397_17280 PF06463 Molybdenum Cofactor Synthesis C KM397_17285 PF02634 FdhD/NarQ family KM397_17290 PF10057 Uncharacterized conserved protein (DUF2294) KM397_17295 PF07849 Protein of unknown function (DUF1641) KM397_17300 PF00384 Molybdopterin oxidoreductase KM397_17300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM397_17300 PF01568 Molydopterin dinucleotide binding domain KM397_17300 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM397_17300 PF00037 4Fe-4S binding domain KM397_17305 PF03323 Bacillus/Clostridium GerA spore germination protein KM397_17345 PF08241 Methyltransferase domain KM397_17350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_17355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_17360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_17365 PF00375 Sodium:dicarboxylate symporter family KM397_17370 PF03816 Cell envelope-related transcriptional attenuator domain KM397_17380 PF08281 Sigma-70, region 4 KM397_17380 PF04542 Sigma-70 region 2 KM397_17400 PF13732 Domain of unknown function (DUF4162) KM397_17400 PF00005 ABC transporter KM397_17410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM397_17410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM397_17415 PF03989 DNA gyrase C-terminal domain, beta-propeller KM397_17415 PF00521 DNA gyrase/topoisomerase IV, subunit A KM397_17420 PF00204 DNA gyrase B KM397_17420 PF00986 DNA gyrase B subunit, carboxyl terminus KM397_17420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_17420 PF01751 Toprim domain KM397_17425 PF13380 CoA binding domain KM397_17430 PF13180 PDZ domain KM397_17435 PF00072 Response regulator receiver domain KM397_17435 PF00486 Transcriptional regulatory protein, C terminal KM397_17440 PF04055 Radical SAM superfamily KM397_17445 PF03477 ATP cone domain KM397_17445 PF13597 Anaerobic ribonucleoside-triphosphate reductase KM397_17450 PF02660 Glycerol-3-phosphate acyltransferase KM397_17455 PF01521 Iron-sulphur cluster biosynthesis KM397_17460 PF03061 Thioesterase superfamily KM397_17465 PF00704 Glycosyl hydrolases family 18 KM397_17465 PF01476 LysM domain KM397_17475 PF08177 Small acid-soluble spore protein N family KM397_17480 PF13040 Fur-regulated basic protein B KM397_17485 PF01336 OB-fold nucleic acid binding domain KM397_17485 PF00929 Exonuclease KM397_17485 PF11490 DNA polymerase III polC-type N-terminus II KM397_17485 PF14579 Helix-hairpin-helix motif KM397_17485 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM397_17485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM397_17485 PF02811 PHP domain KM397_17490 PF00578 AhpC/TSA family KM397_17500 PF00664 ABC transporter transmembrane region KM397_17500 PF00005 ABC transporter KM397_17500 PF03412 Peptidase C39 family KM397_17505 PF00330 Aconitase family (aconitate hydratase) KM397_17505 PF00694 Aconitase C-terminal domain KM397_17515 PF01522 Polysaccharide deacetylase KM397_17545 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM397_17545 PF02272 DHHA1 domain KM397_17545 PF01411 tRNA synthetases class II (A) KM397_17550 PF00293 NUDIX domain KM397_17550 PF13344 Haloacid dehalogenase-like hydrolase KM397_17560 PF02803 Thiolase, C-terminal domain KM397_17560 PF00108 Thiolase, N-terminal domain KM397_17565 PF13193 AMP-binding enzyme C-terminal domain KM397_17565 PF00501 AMP-binding enzyme KM397_17570 PF02632 BioY family KM397_17575 PF00501 AMP-binding enzyme KM397_17575 PF13193 AMP-binding enzyme C-terminal domain KM397_17595 PF05532 CsbD-like KM397_17625 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM397_17625 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM397_17635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_17635 PF00512 His Kinase A (phospho-acceptor) domain KM397_17635 PF00989 PAS fold KM397_17635 PF13188 PAS domain KM397_17635 PF13426 PAS domain KM397_17640 PF01738 Dienelactone hydrolase family KM397_17645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM397_17650 PF00474 Sodium:solute symporter family KM397_17655 PF01645 Conserved region in glutamate synthase KM397_17660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM397_17665 PF02559 CarD-like/TRCF domain KM397_17670 PF00491 Arginase family KM397_17675 PF01979 Amidohydrolase family KM397_17680 PF17391 Urocanase N-terminal domain KM397_17680 PF01175 Urocanase Rossmann-like domain KM397_17680 PF17392 Urocanase C-terminal domain KM397_17685 PF00221 Aromatic amino acid lyase KM397_17690 PF09021 HutP KM397_17695 PF01209 ubiE/COQ5 methyltransferase family KM397_17715 PF11084 Protein of unknown function (DUF2621) KM397_17750 PF07301 Protein of unknown function (DUF1453) KM397_17755 PF02683 Cytochrome C biogenesis protein transmembrane region KM397_17765 PF03466 LysR substrate binding domain KM397_17765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM397_17770 PF03788 LrgA family KM397_17775 PF04172 LrgB-like family KM397_17780 PF13344 Haloacid dehalogenase-like hydrolase KM397_17780 PF00293 NUDIX domain KM397_17800 PF01510 N-acetylmuramoyl-L-alanine amidase KM397_17800 PF01471 Putative peptidoglycan binding domain KM397_17815 PF00664 ABC transporter transmembrane region KM397_17815 PF00005 ABC transporter KM397_17820 PF00664 ABC transporter transmembrane region KM397_17820 PF00005 ABC transporter KM397_17825 PF03672 Uncharacterised protein family (UPF0154) KM397_17830 PF10747 Sporulation inhibitor of replication protein SirA KM397_17835 PF02779 Transketolase, pyrimidine binding domain KM397_17835 PF00456 Transketolase, thiamine diphosphate binding domain KM397_17835 PF02780 Transketolase, C-terminal domain KM397_17840 PF07282 Putative transposase DNA-binding domain KM397_17840 PF01385 Probable transposase KM397_17840 PF12323 Helix-turn-helix domain KM397_17845 PF00528 Binding-protein-dependent transport system inner membrane component KM397_17850 PF00528 Binding-protein-dependent transport system inner membrane component KM397_17855 PF00005 ABC transporter KM397_17870 PF05979 Bacterial protein of unknown function (DUF896) KM397_17875 PF00239 Resolvase, N terminal domain KM397_17880 PF00717 Peptidase S24-like KM397_17880 PF01726 LexA DNA binding domain KM397_17895 PF03551 Transcriptional regulator PadR-like family KM397_17930 PF01476 LysM domain KM397_17930 PF01510 N-acetylmuramoyl-L-alanine amidase KM397_17930 PF01471 Putative peptidoglycan binding domain KM397_17935 PF05105 Bacteriophage holin family KM397_18090 PF08281 Sigma-70, region 4 KM397_18135 PF02511 Thymidylate synthase complementing protein KM397_18140 PF00145 C-5 cytosine-specific DNA methylase KM397_18215 PF01381 Helix-turn-helix KM397_18235 PF02899 Phage integrase, N-terminal SAM-like domain KM397_18235 PF00589 Phage integrase family KM397_18240 PF03951 Glutamine synthetase, beta-Grasp domain KM397_18240 PF00120 Glutamine synthetase, catalytic domain KM397_18245 PF13411 MerR HTH family regulatory protein KM397_18250 PF06838 Methionine gamma-lyase KM397_18260 PF03458 UPF0126 domain KM397_18270 PF00004 ATPase family associated with various cellular activities (AAA) KM397_18270 PF17866 AAA lid domain KM397_18285 PF17209 Hfq protein KM397_18300 PF06725 3D domain KM397_18300 PF01476 LysM domain KM397_18305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM397_18305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM397_18310 PF00294 pfkB family carbohydrate kinase KM397_18315 PF00455 DeoR C terminal sensor domain KM397_18315 PF08220 DeoR-like helix-turn-helix domain KM397_18325 PF04238 Protein of unknown function (DUF420) KM397_18335 PF00324 Amino acid permease KM397_18340 PF00704 Glycosyl hydrolases family 18 KM397_18340 PF00041 Fibronectin type III domain KM397_18350 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM397_18350 PF00149 Calcineurin-like phosphoesterase KM397_18355 PF01226 Formate/nitrite transporter KM397_18360 PF00216 Bacterial DNA-binding protein KM397_18365 PF00403 Heavy-metal-associated domain KM397_18370 PF00403 Heavy-metal-associated domain KM397_18375 PF02583 Metal-sensitive transcriptional repressor KM397_18385 PF00756 Putative esterase KM397_18390 PF00005 ABC transporter KM397_18395 PF01032 FecCD transport family KM397_18400 PF01032 FecCD transport family KM397_18410 PF03372 Endonuclease/Exonuclease/phosphatase family KM397_18415 PF02805 Metal binding domain of Ada KM397_18415 PF12833 Helix-turn-helix domain KM397_18420 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM397_18420 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM397_18425 PF00730 HhH-GPD superfamily base excision DNA repair protein KM397_18425 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain KM397_18430 PF01546 Peptidase family M20/M25/M40 KM397_18430 PF07687 Peptidase dimerisation domain KM397_18450 PF00561 alpha/beta hydrolase fold KM397_18455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM397_18460 PF03707 Bacterial signalling protein N terminal repeat KM397_18460 PF00990 Diguanylate cyclase, GGDEF domain KM397_18460 PF00563 EAL domain KM397_18470 PF10787 Uncharacterised protein from bacillus cereus group KM397_18475 PF04172 LrgB-like family KM397_18480 PF03788 LrgA family KM397_18485 PF00155 Aminotransferase class I and II KM397_18485 PF00392 Bacterial regulatory proteins, gntR family KM397_18490 PF00561 alpha/beta hydrolase fold KM397_18490 PF00364 Biotin-requiring enzyme KM397_18495 PF02585 GlcNAc-PI de-N-acetylase KM397_18510 PF00388 Phosphatidylinositol-specific phospholipase C, X domain KM397_18515 PF00082 Subtilase family KM397_18520 PF07486 Cell Wall Hydrolase KM397_18525 PF03275 UDP-galactopyranose mutase KM397_18530 PF00884 Sulfatase KM397_18535 PF00350 Dynamin family KM397_18545 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KM397_18550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_18550 PF00512 His Kinase A (phospho-acceptor) domain KM397_18555 PF00072 Response regulator receiver domain KM397_18555 PF00486 Transcriptional regulatory protein, C terminal KM397_18570 PF00005 ABC transporter KM397_18575 PF01119 DNA mismatch repair protein, C-terminal domain KM397_18575 PF08676 MutL C terminal dimerisation domain KM397_18580 PF05192 MutS domain III KM397_18580 PF05190 MutS family domain IV KM397_18580 PF05188 MutS domain II KM397_18580 PF00488 MutS domain V KM397_18580 PF01624 MutS domain I KM397_18585 PF10628 Outer spore coat protein E (CotE) KM397_18590 PF06133 Control of competence regulator ComK, YlbF/YmcA KM397_18595 PF00919 Uncharacterized protein family UPF0004 KM397_18595 PF01938 TRAM domain KM397_18595 PF04055 Radical SAM superfamily KM397_18600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM397_18605 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KM397_18605 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KM397_18605 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KM397_18610 PF01244 Membrane dipeptidase (Peptidase family M19) KM397_18615 PF04232 Stage V sporulation protein S (SpoVS) KM397_18620 PF13277 YmdB-like protein KM397_18625 PF01966 HD domain KM397_18625 PF00013 KH domain KM397_18625 PF12072 Domain of unknown function (DUF3552) KM397_18630 PF00154 recA bacterial DNA recombination protein KM397_18640 PF02464 Competence-damaged protein KM397_18640 PF00994 Probable molybdopterin binding domain KM397_18640 PF18146 Damage-inducible protein CinA KH domain KM397_18645 PF01066 CDP-alcohol phosphatidyltransferase KM397_18650 PF13464 Domain of unknown function (DUF4115) KM397_18655 PF11868 Protein of unknown function (DUF3388) KM397_18660 PF11588 Protein of unknown function (DUF3243) KM397_18670 PF05193 Peptidase M16 inactive domain KM397_18670 PF00675 Insulinase (Peptidase family M16) KM397_18675 PF05193 Peptidase M16 inactive domain KM397_18680 PF02653 Branched-chain amino acid transport system / permease component KM397_18690 PF00005 ABC transporter KM397_18695 PF02608 ABC transporter substrate-binding protein PnrA-like KM397_18700 PF07702 UTRA domain KM397_18700 PF00392 Bacterial regulatory proteins, gntR family KM397_18705 PF09397 Ftsk gamma domain KM397_18705 PF01580 FtsK/SpoIIIE family KM397_18705 PF17854 FtsK alpha domain KM397_18710 PF14035 YlzJ-like protein KM397_18715 PF00574 Clp protease KM397_18720 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM397_18720 PF00753 Metallo-beta-lactamase superfamily KM397_18720 PF17770 Ribonuclease J C-terminal domain KM397_18725 PF00701 Dihydrodipicolinate synthetase family KM397_18730 PF00696 Amino acid kinase family KM397_18730 PF13840 ACT domain KM397_18735 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM397_18735 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM397_18740 PF02441 Flavoprotein KM397_18745 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM397_18745 PF16924 Dipicolinate synthase subunit A N-terminal domain KM397_18750 PF05239 PRC-barrel domain KM397_18755 PF00675 Insulinase (Peptidase family M16) KM397_18755 PF05193 Peptidase M16 inactive domain KM397_18760 PF01522 Polysaccharide deacetylase KM397_18765 PF03725 3' exoribonuclease family, domain 2 KM397_18765 PF00013 KH domain KM397_18765 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KM397_18765 PF01138 3' exoribonuclease family, domain 1 KM397_18765 PF00575 S1 RNA binding domain KM397_18770 PF00312 Ribosomal protein S15 KM397_18775 PF01687 Riboflavin kinase KM397_18775 PF06574 FAD synthetase KM397_18780 PF01509 TruB family pseudouridylate synthase (N terminal domain) KM397_18780 PF16198 tRNA pseudouridylate synthase B C-terminal domain KM397_18785 PF02033 Ribosome-binding factor A KM397_18790 PF04456 Protein of unknown function (DUF503) KM397_18795 PF04760 Translation initiation factor IF-2, N-terminal region KM397_18795 PF11987 Translation-initiation factor 2 KM397_18795 PF00009 Elongation factor Tu GTP binding domain KM397_18800 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM397_18805 PF04296 Protein of unknown function (DUF448) KM397_18810 PF08529 NusA N-terminal domain KM397_18810 PF13184 NusA-like KH domain KM397_18810 PF00575 S1 RNA binding domain KM397_18815 PF17384 RimP C-terminal SH3 domain KM397_18815 PF02576 RimP N-terminal domain KM397_18820 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM397_18820 PF14480 DNA polymerase III polC-type N-terminus I KM397_18820 PF11490 DNA polymerase III polC-type N-terminus II KM397_18820 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM397_18820 PF14579 Helix-hairpin-helix motif KM397_18820 PF02811 PHP domain KM397_18820 PF00929 Exonuclease KM397_18825 PF03129 Anticodon binding domain KM397_18825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM397_18825 PF04073 Aminoacyl-tRNA editing domain KM397_18830 PF17820 PDZ domain KM397_18830 PF02163 Peptidase family M50 KM397_18835 PF13288 DXP reductoisomerase C-terminal domain KM397_18835 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM397_18835 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM397_18845 PF01255 Putative undecaprenyl diphosphate synthase KM397_18850 PF01765 Ribosome recycling factor KM397_18855 PF00696 Amino acid kinase family KM397_18860 PF00889 Elongation factor TS KM397_18865 PF00318 Ribosomal protein S2 KM397_18870 PF06018 CodY GAF-like domain KM397_18870 PF08222 CodY helix-turn-helix domain KM397_18875 PF00004 ATPase family associated with various cellular activities (AAA) KM397_18875 PF10431 C-terminal, D2-small domain, of ClpB protein KM397_18875 PF07724 AAA domain (Cdc48 subfamily) KM397_18880 PF00227 Proteasome subunit KM397_18885 PF00589 Phage integrase family KM397_18885 PF02899 Phage integrase, N-terminal SAM-like domain KM397_18890 PF01134 Glucose inhibited division protein A KM397_18895 PF01131 DNA topoisomerase KM397_18895 PF01751 Toprim domain KM397_18895 PF01396 Topoisomerase DNA binding C4 zinc finger KM397_18905 PF02629 CoA binding domain KM397_18905 PF00549 CoA-ligase KM397_18910 PF08442 ATP-grasp domain KM397_18910 PF00549 CoA-ligase KM397_18915 PF01351 Ribonuclease HII KM397_18920 PF01926 50S ribosome-binding GTPase KM397_18925 PF10502 Signal peptidase, peptidase S26 KM397_18930 PF01245 Ribosomal protein L19 KM397_18935 PF01746 tRNA (Guanine-1)-methyltransferase KM397_18940 PF01782 RimM N-terminal domain KM397_18940 PF05239 PRC-barrel domain KM397_18950 PF00886 Ribosomal protein S16 KM397_18955 PF02978 Signal peptide binding domain KM397_18955 PF02881 SRP54-type protein, helical bundle domain KM397_18955 PF00448 SRP54-type protein, GTPase domain KM397_18960 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KM397_18965 PF00448 SRP54-type protein, GTPase domain KM397_18965 PF02881 SRP54-type protein, helical bundle domain KM397_18970 PF06470 SMC proteins Flexible Hinge Domain KM397_18970 PF02463 RecF/RecN/SMC N terminal domain KM397_18975 PF00035 Double-stranded RNA binding motif KM397_18975 PF14622 Ribonuclease-III-like KM397_18980 PF00550 Phosphopantetheine attachment site KM397_18990 PF00698 Acyl transferase domain KM397_18995 PF02504 Fatty acid synthesis protein KM397_19000 PF03061 Thioesterase superfamily KM397_19005 PF17191 RecG wedge domain KM397_19005 PF00271 Helicase conserved C-terminal domain KM397_19005 PF00270 DEAD/DEAH box helicase KM397_19010 PF02734 DAK2 domain KM397_19010 PF13684 Dihydroxyacetone kinase family KM397_19015 PF03780 Asp23 family, cell envelope-related function KM397_19020 PF00830 Ribosomal L28 family KM397_19025 PF08183 Stage V sporulation protein family KM397_19030 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KM397_19030 PF04263 Thiamin pyrophosphokinase, catalytic domain KM397_19035 PF00834 Ribulose-phosphate 3 epimerase family KM397_19040 PF03193 RsgA GTPase KM397_19040 PF16745 RsgA N-terminal domain KM397_19045 PF00069 Protein kinase domain KM397_19045 PF03793 PASTA domain KM397_19055 PF04055 Radical SAM superfamily KM397_19060 PF01189 16S rRNA methyltransferase RsmB/F KM397_19060 PF01029 NusB family KM397_19065 PF02911 Formyl transferase, C-terminal domain KM397_19065 PF00551 Formyl transferase KM397_19070 PF01327 Polypeptide deformylase KM397_19075 PF00271 Helicase conserved C-terminal domain KM397_19075 PF17764 3′ DNA-binding domain (3′BD) KM397_19075 PF18074 Primosomal protein N C-terminal domain KM397_19075 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KM397_19075 PF04851 Type III restriction enzyme, res subunit KM397_19080 PF02441 Flavoprotein KM397_19080 PF04127 DNA / pantothenate metabolism flavoprotein KM397_19085 PF01192 RNA polymerase Rpb6 KM397_19090 PF00625 Guanylate kinase KM397_19095 PF04025 Domain of unknown function (DUF370) KM397_19100 PF08340 Domain of unknown function (DUF1732) KM397_19100 PF03755 YicC-like family, N-terminal region KM397_19105 PF00689 Cation transporting ATPase, C-terminus KM397_19105 PF00690 Cation transporter/ATPase, N-terminus KM397_19110 PF05670 NFACT protein RNA binding domain KM397_19115 PF01321 Creatinase/Prolidase N-terminal domain KM397_19115 PF00557 Metallopeptidase family M24 KM397_19145 PF00156 Phosphoribosyl transferase domain KM397_19150 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KM397_19155 PF01180 Dihydroorotate dehydrogenase KM397_19160 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KM397_19160 PF00175 Oxidoreductase NAD-binding domain KM397_19165 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KM397_19165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM397_19165 PF02142 MGS-like domain KM397_19170 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KM397_19170 PF00117 Glutamine amidotransferase class-I KM397_19175 PF01979 Amidohydrolase family KM397_19180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM397_19180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM397_19185 PF00860 Permease family KM397_19190 PF00156 Phosphoribosyl transferase domain KM397_19195 PF00849 RNA pseudouridylate synthase KM397_19195 PF01479 S4 domain KM397_19200 PF01252 Signal peptidase (SPase) II KM397_19210 PF00133 tRNA synthetases class I (I, L, M and V) KM397_19210 PF06827 Zinc finger found in FPG and IleRS KM397_19210 PF08264 Anticodon-binding domain of tRNA KM397_19215 PF05103 DivIVA protein KM397_19220 PF01479 S4 domain KM397_19220 PF17774 Putative RNA-binding domain in YlmH KM397_19225 PF02325 YGGT family KM397_19230 PF04472 Cell division protein SepF KM397_19235 PF01168 Alanine racemase, N-terminal domain KM397_19240 PF02578 Multi-copper polyphenol oxidoreductase laccase KM397_19245 PF05239 PRC-barrel domain KM397_19250 PF04542 Sigma-70 region 2 KM397_19250 PF04539 Sigma-70 region 3 KM397_19250 PF04545 Sigma-70, region 4 KM397_19255 PF04545 Sigma-70, region 4 KM397_19255 PF04542 Sigma-70 region 2 KM397_19260 PF03419 Sporulation factor SpoIIGA KM397_19265 PF12327 FtsZ family, C-terminal domain KM397_19265 PF00091 Tubulin/FtsZ family, GTPase domain KM397_19270 PF02491 SHS2 domain inserted in FTSA KM397_19275 PF03799 Cell division protein FtsQ KM397_19275 PF08478 POTRA domain, FtsQ-type KM397_19280 PF01565 FAD binding domain KM397_19280 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM397_19285 PF04101 Glycosyltransferase family 28 C-terminal domain KM397_19285 PF03033 Glycosyltransferase family 28 N-terminal domain KM397_19290 PF01098 Cell cycle protein KM397_19295 PF02875 Mur ligase family, glutamate ligase domain KM397_19295 PF08245 Mur ligase middle domain KM397_19300 PF00953 Glycosyl transferase family 4 KM397_19300 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KM397_19305 PF08245 Mur ligase middle domain KM397_19305 PF02875 Mur ligase family, glutamate ligase domain KM397_19305 PF01225 Mur ligase family, catalytic domain KM397_19310 PF03793 PASTA domain KM397_19310 PF00905 Penicillin binding protein transpeptidase domain KM397_19310 PF03717 Penicillin-binding Protein dimerisation domain KM397_19315 PF03717 Penicillin-binding Protein dimerisation domain KM397_19315 PF03793 PASTA domain KM397_19315 PF00905 Penicillin binding protein transpeptidase domain KM397_19320 PF04977 Septum formation initiator KM397_19325 PF01795 MraW methylase family KM397_19330 PF10079 Bacillithiol biosynthesis BshC KM397_19335 PF02558 Ketopantoate reductase PanE/ApbA KM397_19335 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM397_19340 PF00583 Acetyltransferase (GNAT) family KM397_19350 PF01783 Ribosomal L32p protein family KM397_19355 PF02620 Large ribosomal RNA subunit accumulation protein YceD KM397_19400 PF01510 N-acetylmuramoyl-L-alanine amidase KM397_19400 PF12123 N-acetylmuramoyl-l-alanine amidase KM397_19405 PF05105 Bacteriophage holin family KM397_19480 PF00574 Clp protease KM397_19490 PF03354 Phage Terminase KM397_19510 PF10137 Predicted nucleotide-binding protein containing TIR-like domain KM397_19515 PF00589 Phage integrase family KM397_19565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM397_19580 PF00692 dUTPase KM397_19595 PF04542 Sigma-70 region 2 KM397_19595 PF04545 Sigma-70, region 4 KM397_19595 PF04539 Sigma-70 region 3 KM397_19620 PF01695 IstB-like ATP binding protein KM397_19620 PF07319 Primosomal protein DnaI N-terminus KM397_19650 PF01381 Helix-turn-helix KM397_19665 PF01381 Helix-turn-helix KM397_19680 PF00589 Phage integrase family KM397_19680 PF14659 Phage integrase, N-terminal SAM-like domain KM397_19685 PF05636 HIGH Nucleotidyl Transferase KM397_19690 PF13180 PDZ domain KM397_19690 PF05362 Lon protease (S16) C-terminal proteolytic domain KM397_19695 PF01734 Patatin-like phospholipase KM397_19700 PF07670 Nucleoside recognition KM397_19705 PF01467 Cytidylyltransferase-like KM397_19720 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KM397_19725 PF06133 Control of competence regulator ComK, YlbF/YmcA KM397_19730 PF00300 Histidine phosphatase superfamily (branch 1) KM397_19735 PF14003 YlbE-like protein KM397_19740 PF14071 Putative coat protein KM397_19745 PF00188 Cysteine-rich secretory protein family KM397_19745 PF14504 CAP-associated N-terminal KM397_19750 PF08868 YugN-like family KM397_19755 PF00795 Carbon-nitrogen hydrolase KM397_19760 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KM397_19765 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KM397_19770 PF00510 Cytochrome c oxidase subunit III KM397_19775 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM397_19780 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KM397_19780 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM397_19780 PF00034 Cytochrome c KM397_19785 PF01040 UbiA prenyltransferase family KM397_19790 PF02628 Cytochrome oxidase assembly protein KM397_19795 PF02436 Conserved carboxylase domain KM397_19795 PF00682 HMGL-like KM397_19795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM397_19795 PF00364 Biotin-requiring enzyme KM397_19795 PF02785 Biotin carboxylase C-terminal domain KM397_19795 PF00289 Biotin carboxylase, N-terminal domain KM397_19800 PF01098 Cell cycle protein KM397_19805 PF07408 Protein of unknown function (DUF1507) KM397_19815 PF02562 PhoH-like protein KM397_19815 PF13638 PIN domain KM397_19825 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KM397_19835 PF14036 YlaH-like protein KM397_19840 PF03144 Elongation factor Tu domain 2 KM397_19840 PF00009 Elongation factor Tu GTP binding domain KM397_19840 PF14492 Elongation Factor G, domain II KM397_19840 PF00679 Elongation factor G C-terminus KM397_19850 PF00459 Inositol monophosphatase family KM397_19860 PF06335 Protein of unknown function (DUF1054) KM397_19865 PF05256 Uncharacterised protein family (UPF0223) KM397_19870 PF01276 Orn/Lys/Arg decarboxylase, major domain KM397_19870 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM397_19910 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM397_19910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM397_19915 PF02817 e3 binding domain KM397_19915 PF00364 Biotin-requiring enzyme KM397_19915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM397_19920 PF02780 Transketolase, C-terminal domain KM397_19920 PF02779 Transketolase, pyrimidine binding domain KM397_19925 PF00676 Dehydrogenase E1 component KM397_19935 PF01327 Polypeptide deformylase KM397_19945 PF07288 Protein of unknown function (DUF1447) KM397_19950 PF00753 Metallo-beta-lactamase superfamily KM397_19950 PF17770 Ribonuclease J C-terminal domain KM397_19950 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM397_19955 PF02254 TrkA-N domain KM397_19955 PF02080 TrkA-C domain KM397_19965 PF07687 Peptidase dimerisation domain KM397_19965 PF01546 Peptidase family M20/M25/M40 KM397_19970 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KM397_19970 PF00132 Bacterial transferase hexapeptide (six repeats) KM397_19970 PF14602 Hexapeptide repeat of succinyl-transferase KM397_19975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM397_19975 PF03466 LysR substrate binding domain KM397_19990 PF04308 Ribonuclease H-like KM397_20000 PF08796 Protein of unknown function (DUF1797) KM397_20015 PF00563 EAL domain KM397_20015 PF10388 EAL-domain associated signalling protein domain KM397_20025 PF00149 Calcineurin-like phosphoesterase KM397_20025 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM397_20035 PF13089 Polyphosphate kinase N-terminal domain KM397_20035 PF17941 Polyphosphate kinase C-terminal domain 1 KM397_20035 PF02503 Polyphosphate kinase middle domain KM397_20035 PF13090 Polyphosphate kinase C-terminal domain 2 KM397_20040 PF02541 Ppx/GppA phosphatase family KM397_20045 PF14177 YkyB-like protein KM397_20070 PF07690 Major Facilitator Superfamily KM397_20080 PF08267 Cobalamin-independent synthase, N-terminal domain KM397_20080 PF01717 Cobalamin-independent synthase, Catalytic domain KM397_20090 PF14040 Deoxyribonuclease NucA/NucB KM397_20100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_20100 PF00512 His Kinase A (phospho-acceptor) domain KM397_20110 PF00155 Aminotransferase class I and II KM397_20115 PF00356 Bacterial regulatory proteins, lacI family KM397_20115 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM397_20120 PF00528 Binding-protein-dependent transport system inner membrane component KM397_20125 PF00528 Binding-protein-dependent transport system inner membrane component KM397_20130 PF13416 Bacterial extracellular solute-binding protein KM397_20135 PF02903 Alpha amylase, N-terminal ig-like domain KM397_20135 PF16657 Maltogenic Amylase, C-terminal domain KM397_20135 PF00128 Alpha amylase, catalytic domain KM397_20140 PF00128 Alpha amylase, catalytic domain KM397_20140 PF16657 Maltogenic Amylase, C-terminal domain KM397_20145 PF00005 ABC transporter KM397_20145 PF17912 MalK OB fold domain KM397_20145 PF03459 TOBE domain KM397_20185 PF02803 Thiolase, C-terminal domain KM397_20185 PF00108 Thiolase, N-terminal domain KM397_20190 PF00293 NUDIX domain KM397_20220 PF03551 Transcriptional regulator PadR-like family KM397_20235 PF01008 Initiation factor 2 subunit family KM397_20240 PF01636 Phosphotransferase enzyme family KM397_20245 PF00795 Carbon-nitrogen hydrolase KM397_20250 PF00155 Aminotransferase class I and II KM397_20255 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KM397_20255 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KM397_20265 PF00596 Class II Aldolase and Adducin N-terminal domain KM397_20270 PF03079 ARD/ARD' family KM397_20290 PF00990 Diguanylate cyclase, GGDEF domain KM397_20290 PF08448 PAS fold KM397_20295 PF00881 Nitroreductase family KM397_20310 PF05524 PEP-utilising enzyme, N-terminal KM397_20310 PF02896 PEP-utilising enzyme, TIM barrel domain KM397_20310 PF00391 PEP-utilising enzyme, mobile domain KM397_20315 PF00381 PTS HPr component phosphorylation site KM397_20320 PF02378 Phosphotransferase system, EIIC KM397_20320 PF00367 phosphotransferase system, EIIB KM397_20320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM397_20325 PF03123 CAT RNA binding domain KM397_20325 PF00874 PRD domain KM397_20335 PF00392 Bacterial regulatory proteins, gntR family KM397_20335 PF07702 UTRA domain KM397_20340 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KM397_20345 PF01979 Amidohydrolase family KM397_20355 PF04079 Segregation and condensation complex subunit ScpB KM397_20360 PF02616 Segregation and condensation protein ScpA KM397_20370 PF03745 Domain of unknown function (DUF309) KM397_20375 PF00583 Acetyltransferase (GNAT) family KM397_20380 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KM397_20385 PF06207 Protein of unknown function (DUF1002) KM397_20395 PF03323 Bacillus/Clostridium GerA spore germination protein KM397_20400 PF14097 Stage V sporulation protein AE1 KM397_20405 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM397_20410 PF07451 Stage V sporulation protein AD (SpoVAD) KM397_20415 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM397_20420 PF13782 Stage V sporulation protein AB KM397_20425 PF12164 Stage V sporulation protein AA KM397_20435 PF00209 Sodium:neurotransmitter symporter family KM397_20440 PF04542 Sigma-70 region 2 KM397_20440 PF04539 Sigma-70 region 3 KM397_20440 PF04545 Sigma-70, region 4 KM397_20445 PF13581 Histidine kinase-like ATPase domain KM397_20450 PF01740 STAS domain KM397_20455 PF07943 Penicillin-binding protein 5, C-terminal domain KM397_20455 PF00768 D-alanyl-D-alanine carboxypeptidase KM397_20460 PF00392 Bacterial regulatory proteins, gntR family KM397_20465 PF00005 ABC transporter KM397_20480 PF01047 MarR family KM397_20490 PF00860 Permease family KM397_20495 PF01544 CorA-like Mg2+ transporter protein KM397_20500 PF00591 Glycosyl transferase family, a/b domain KM397_20500 PF02885 Glycosyl transferase family, helical bundle domain KM397_20500 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM397_20505 PF01048 Phosphorylase superfamily KM397_20510 PF01676 Metalloenzyme superfamily KM397_20520 PF02899 Phage integrase, N-terminal SAM-like domain KM397_20520 PF00589 Phage integrase family KM397_20525 PF14004 Protein of unknown function (DUF4227) KM397_20530 PF01475 Ferric uptake regulator family KM397_20535 PF01944 Stage II sporulation protein M KM397_20545 PF00293 NUDIX domain KM397_20550 PF13072 Mother cell inhibitor of FtsZ KM397_20555 PF00248 Aldo/keto reductase family KM397_20560 PF00248 Aldo/keto reductase family KM397_20565 PF04229 GrpB protein KM397_20565 PF13673 Acetyltransferase (GNAT) domain KM397_20575 PF02872 5'-nucleotidase, C-terminal domain KM397_20575 PF00565 Staphylococcal nuclease homologue KM397_20575 PF00746 LPXTG cell wall anchor motif KM397_20575 PF00149 Calcineurin-like phosphoesterase KM397_20585 PF12146 Serine aminopeptidase, S33 KM397_20590 PF13726 Na+-H+ antiporter family KM397_20590 PF03553 Na+/H+ antiporter family KM397_20595 PF00356 Bacterial regulatory proteins, lacI family KM397_20600 PF00583 Acetyltransferase (GNAT) family KM397_20605 PF12146 Serine aminopeptidase, S33 KM397_20610 PF10827 Protein of unknown function (DUF2552) KM397_20620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM397_20620 PF01872 RibD C-terminal domain KM397_20625 PF00677 Lumazine binding domain KM397_20630 PF00925 GTP cyclohydrolase II KM397_20630 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KM397_20635 PF00885 6,7-dimethyl-8-ribityllumazine synthase KM397_20645 PF04055 Radical SAM superfamily KM397_20645 PF06968 Biotin and Thiamin Synthesis associated domain KM397_20650 PF13847 Methyltransferase domain KM397_20655 PF12697 Alpha/beta hydrolase family KM397_20655 PF08241 Methyltransferase domain KM397_20660 PF00155 Aminotransferase class I and II KM397_20670 PF00202 Aminotransferase class-III KM397_20680 PF03553 Na+/H+ antiporter family KM397_20685 PF00149 Calcineurin-like phosphoesterase KM397_20685 PF02872 5'-nucleotidase, C-terminal domain KM397_20695 PF01037 Lrp/AsnC ligand binding domain KM397_20695 PF13404 AsnC-type helix-turn-helix domain KM397_20710 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM397_20710 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM397_20715 PF00202 Aminotransferase class-III KM397_20720 PF00696 Amino acid kinase family KM397_20725 PF01960 ArgJ family KM397_20730 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM397_20730 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM397_20740 PF00106 short chain dehydrogenase KM397_20750 PF03807 NADP oxidoreductase coenzyme F420-dependent KM397_20750 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM397_20755 PF03313 Serine dehydratase alpha chain KM397_20760 PF01842 ACT domain KM397_20760 PF03315 Serine dehydratase beta chain KM397_20770 PF12706 Beta-lactamase superfamily domain KM397_20770 PF00753 Metallo-beta-lactamase superfamily KM397_20780 PF11799 impB/mucB/samB family C-terminal domain KM397_20780 PF00817 impB/mucB/samB family KM397_20780 PF11798 IMS family HHH motif KM397_20790 PF07687 Peptidase dimerisation domain KM397_20790 PF01546 Peptidase family M20/M25/M40 KM397_20795 PF13302 Acetyltransferase (GNAT) domain KM397_20810 PF03734 L,D-transpeptidase catalytic domain KM397_20815 PF06081 Aromatic acid exporter family member 1 KM397_20815 PF11728 Putative aromatic acid exporter C-terminal domain KM397_20820 PF00005 ABC transporter KM397_20825 PF00528 Binding-protein-dependent transport system inner membrane component KM397_20830 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM397_20835 PF06491 Disulphide isomerase KM397_20840 PF11208 Protein of unknown function (DUF2992) KM397_20850 PF01098 Cell cycle protein KM397_20855 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM397_20855 PF02817 e3 binding domain KM397_20855 PF00364 Biotin-requiring enzyme KM397_20860 PF02779 Transketolase, pyrimidine binding domain KM397_20860 PF02780 Transketolase, C-terminal domain KM397_20865 PF00676 Dehydrogenase E1 component KM397_20870 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM397_20870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM397_20875 PF00871 Acetokinase family KM397_20880 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM397_20880 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM397_20885 PF01515 Phosphate acetyl/butaryl transferase KM397_20890 PF02954 Bacterial regulatory protein, Fis family KM397_20890 PF00158 Sigma-54 interaction domain KM397_20890 PF00989 PAS fold KM397_20900 PF03009 Glycerophosphoryl diester phosphodiesterase family KM397_20905 PF14174 YycC-like protein KM397_20915 PF08769 Sporulation initiation factor Spo0A C terminal KM397_20915 PF00072 Response regulator receiver domain KM397_20920 PF05580 SpoIVB peptidase S55 KM397_20920 PF17820 PDZ domain KM397_20925 PF13476 AAA domain KM397_20930 PF01316 Arginine repressor, DNA binding domain KM397_20930 PF02863 Arginine repressor, C-terminal domain KM397_20935 PF01728 FtsJ-like methyltransferase KM397_20935 PF01479 S4 domain KM397_20940 PF02779 Transketolase, pyrimidine binding domain KM397_20940 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KM397_20940 PF02780 Transketolase, C-terminal domain KM397_20945 PF00348 Polyprenyl synthetase KM397_20950 PF02609 Exonuclease VII small subunit KM397_20955 PF02601 Exonuclease VII, large subunit KM397_20955 PF13742 OB-fold nucleic acid binding domain KM397_20960 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KM397_20960 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KM397_20965 PF01029 NusB family KM397_20970 PF03780 Asp23 family, cell envelope-related function KM397_20975 PF02785 Biotin carboxylase C-terminal domain KM397_20975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM397_20975 PF00289 Biotin carboxylase, N-terminal domain KM397_20980 PF00364 Biotin-requiring enzyme KM397_20990 PF12685 SpoIIIAH-like protein KM397_21000 PF09581 Stage III sporulation protein AF (Spore_III_AF) KM397_21005 PF09546 Stage III sporulation protein AE (spore_III_AE) KM397_21010 PF06686 Stage III sporulation protein AC/AD protein family KM397_21015 PF06686 Stage III sporulation protein AC/AD protein family KM397_21020 PF09548 Stage III sporulation protein AB (spore_III_AB) KM397_21045 PF08207 Elongation factor P (EF-P) KOW-like domain KM397_21045 PF09285 Elongation factor P, C-terminal KM397_21045 PF01132 Elongation factor P (EF-P) OB domain KM397_21050 PF01321 Creatinase/Prolidase N-terminal domain KM397_21050 PF00557 Metallopeptidase family M24 KM397_21055 PF01220 Dehydroquinase class II KM397_21060 PF11085 Conserved membrane protein YqhR KM397_21065 PF07136 Protein of unknown function (DUF1385) KM397_21075 PF13419 Haloacid dehalogenase-like hydrolase KM397_21080 PF02742 Iron dependent repressor, metal binding and dimerisation domain KM397_21080 PF01325 Iron dependent repressor, N-terminal DNA binding domain KM397_21095 PF03099 Biotin/lipoate A/B protein ligase family KM397_21100 PF00581 Rhodanese-like domain KM397_21105 PF00356 Bacterial regulatory proteins, lacI family KM397_21105 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM397_21115 PF00893 Small Multidrug Resistance protein KM397_21120 PF00893 Small Multidrug Resistance protein KM397_21155 PF00005 ABC transporter KM397_21160 PF00392 Bacterial regulatory proteins, gntR family KM397_21175 PF02347 Glycine cleavage system P-protein KM397_21180 PF02347 Glycine cleavage system P-protein KM397_21185 PF01571 Aminomethyltransferase folate-binding domain KM397_21185 PF08669 Glycine cleavage T-protein C-terminal barrel domain KM397_21190 PF00176 SNF2 family N-terminal domain KM397_21190 PF00271 Helicase conserved C-terminal domain KM397_21195 PF11079 Bacterial protein YqhG of unknown function KM397_21215 PF14038 YqzE-like protein KM397_21220 PF01202 Shikimate kinase KM397_21245 PF07963 Prokaryotic N-terminal methylation motif KM397_21255 PF00482 Type II secretion system (T2SS), protein F KM397_21260 PF00437 Type II/IV secretion system protein KM397_21270 PF11117 Protein of unknown function (DUF2626) KM397_21275 PF00375 Sodium:dicarboxylate symporter family KM397_21310 PF04101 Glycosyltransferase family 28 C-terminal domain KM397_21310 PF03033 Glycosyltransferase family 28 N-terminal domain KM397_21315 PF02574 Homocysteine S-methyltransferase KM397_21315 PF00809 Pterin binding enzyme KM397_21315 PF02310 B12 binding domain KM397_21315 PF02607 B12 binding domain KM397_21315 PF02965 Vitamin B12 dependent methionine synthase, activation domain KM397_21320 PF02574 Homocysteine S-methyltransferase KM397_21320 PF02219 Methylenetetrahydrofolate reductase KM397_21325 PF01053 Cys/Met metabolism PLP-dependent enzyme KM397_21330 PF01053 Cys/Met metabolism PLP-dependent enzyme KM397_21340 PF01022 Bacterial regulatory protein, arsR family KM397_21350 PF00753 Metallo-beta-lactamase superfamily KM397_21355 PF10958 Protein of unknown function (DUF2759) KM397_21360 PF00480 ROK family KM397_21365 PF06014 Bacterial protein of unknown function (DUF910) KM397_21370 PF01812 5-formyltetrahydrofolate cyclo-ligase family KM397_21375 PF00471 Ribosomal protein L33 KM397_21380 PF00483 Nucleotidyl transferase KM397_21385 PF01895 PhoU domain KM397_21390 PF00005 ABC transporter KM397_21395 PF00528 Binding-protein-dependent transport system inner membrane component KM397_21400 PF00528 Binding-protein-dependent transport system inner membrane component KM397_21405 PF12849 PBP superfamily domain KM397_21410 PF00905 Penicillin binding protein transpeptidase domain KM397_21410 PF03717 Penicillin-binding Protein dimerisation domain KM397_21415 PF07690 Major Facilitator Superfamily KM397_21420 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM397_21420 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM397_21440 PF04551 GcpE protein KM397_21445 PF01475 Ferric uptake regulator family KM397_21450 PF00950 ABC 3 transport family KM397_21455 PF00005 ABC transporter KM397_21460 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM397_21460 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM397_21465 PF11116 Protein of unknown function (DUF2624) KM397_21470 PF01261 Xylose isomerase-like TIM barrel KM397_21475 PF00270 DEAD/DEAH box helicase KM397_21475 PF00271 Helicase conserved C-terminal domain KM397_21485 PF02401 LytB protein KM397_21490 PF01784 NIF3 (NGG1p interacting factor 3) KM397_21495 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KM397_21500 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM397_21505 PF04545 Sigma-70, region 4 KM397_21505 PF04539 Sigma-70 region 3 KM397_21505 PF04542 Sigma-70 region 2 KM397_21505 PF03979 Sigma-70 factor, region 1.1 KM397_21505 PF00140 Sigma-70 factor, region 1.2 KM397_21510 PF10410 DnaB-helicase binding domain of primase KM397_21510 PF01807 CHC2 zinc finger KM397_21510 PF08275 DNA primase catalytic core, N-terminal domain KM397_21515 PF03618 Kinase/pyrophosphorylase KM397_21520 PF08279 HTH domain KM397_21520 PF00571 CBS domain KM397_21525 PF11967 Recombination protein O N terminal KM397_21525 PF02565 Recombination protein O C terminal KM397_21535 PF07650 KH domain KM397_21535 PF01926 50S ribosome-binding GTPase KM397_21540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM397_21545 PF01219 Prokaryotic diacylglycerol kinase KM397_21550 PF02130 Uncharacterized protein family UPF0054 KM397_21555 PF01966 HD domain KM397_21555 PF07697 7TM-HD extracellular KM397_21555 PF07698 7TM receptor with intracellular HD hydrolase KM397_21560 PF02562 PhoH-like protein KM397_21565 PF06898 Putative stage IV sporulation protein YqfD KM397_21570 PF07873 YabP family KM397_21575 PF09424 Yqey-like protein KM397_21580 PF01165 Ribosomal protein S21 KM397_21585 PF04055 Radical SAM superfamily KM397_21585 PF01938 TRAM domain KM397_21585 PF00919 Uncharacterized protein family UPF0004 KM397_21590 PF04452 RNA methyltransferase KM397_21600 PF00684 DnaJ central domain KM397_21600 PF01556 DnaJ C terminal domain KM397_21600 PF00226 DnaJ domain KM397_21605 PF00012 Hsp70 protein KM397_21610 PF01025 GrpE KM397_21615 PF01628 HrcA protein C terminal domain KM397_21620 PF06969 HemN C-terminal domain KM397_21620 PF04055 Radical SAM superfamily KM397_21625 PF01638 HxlR-like helix-turn-helix KM397_21630 PF00679 Elongation factor G C-terminus KM397_21630 PF00009 Elongation factor Tu GTP binding domain KM397_21630 PF03144 Elongation factor Tu domain 2 KM397_21630 PF06421 GTP-binding protein LepA C-terminus KM397_21640 PF03418 Germination protease KM397_21645 PF01649 Ribosomal protein S20 KM397_21650 PF06144 DNA polymerase III, delta subunit KM397_21655 PF14141 YqzM-like protein KM397_21665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM397_21670 PF10531 SLBB domain KM397_21675 PF03807 NADP oxidoreductase coenzyme F420-dependent KM397_21675 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM397_21680 PF13649 Methyltransferase domain KM397_21690 PF01966 HD domain KM397_21695 PF01467 Cytidylyltransferase-like KM397_21700 PF01985 CRS1 / YhbY (CRM) domain KM397_21705 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KM397_21705 PF01488 Shikimate / quinate 5-dehydrogenase KM397_21705 PF08501 Shikimate dehydrogenase substrate binding domain KM397_21710 PF01926 50S ribosome-binding GTPase KM397_21725 PF02666 Phosphatidylserine decarboxylase KM397_21730 PF04542 Sigma-70 region 2 KM397_21730 PF04545 Sigma-70, region 4 KM397_21740 PF16244 Domain of unknown function (DUF4901) KM397_21745 PF00471 Ribosomal protein L33 KM397_21750 PF00881 Nitroreductase family KM397_21755 PF04607 Region found in RelA / SpoT proteins KM397_21765 PF00245 Alkaline phosphatase KM397_21775 PF00561 alpha/beta hydrolase fold KM397_21775 PF08386 TAP-like protein KM397_21810 PF05922 Peptidase inhibitor I9 KM397_21810 PF00082 Subtilase family KM397_21810 PF13860 FlgD Ig-like domain KM397_21810 PF02225 PA domain KM397_21815 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KM397_21830 PF07681 DoxX KM397_21860 PF00005 ABC transporter KM397_21865 PF01032 FecCD transport family KM397_21870 PF01497 Periplasmic binding protein KM397_21875 PF14143 YrhC-like protein KM397_21880 PF00171 Aldehyde dehydrogenase family KM397_21880 PF00465 Iron-containing alcohol dehydrogenase KM397_21885 PF01053 Cys/Met metabolism PLP-dependent enzyme KM397_21890 PF00291 Pyridoxal-phosphate dependent enzyme KM397_21895 PF01048 Phosphorylase superfamily KM397_21900 PF08241 Methyltransferase domain KM397_21915 PF03717 Penicillin-binding Protein dimerisation domain KM397_21915 PF00905 Penicillin binding protein transpeptidase domain KM397_21920 PF01272 Transcription elongation factor, GreA/GreB, C-term KM397_21920 PF03449 Transcription elongation factor, N-terminal KM397_21925 PF00485 Phosphoribulokinase / Uridine kinase family KM397_21930 PF16325 Peptidase family U32 C-terminal domain KM397_21930 PF01136 Peptidase family U32 KM397_21935 PF01136 Peptidase family U32 KM397_21940 PF01596 O-methyltransferase KM397_21945 PF02618 YceG-like family KM397_21950 PF06949 Protein of unknown function (DUF1292) KM397_21955 PF03652 Holliday junction resolvase KM397_21960 PF06135 IreB regulatory phosphoprotein KM397_21965 PF02272 DHHA1 domain KM397_21965 PF01411 tRNA synthetases class II (A) KM397_21965 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM397_21975 PF01594 AI-2E family transporter KM397_21995 PF14490 Helix-hairpin-helix containing domain KM397_21995 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KM397_21995 PF13538 UvrD-like helicase C-terminal domain KM397_22010 PF00266 Aminotransferase class-V KM397_22015 PF02082 Transcriptional regulator KM397_22020 PF12002 MgsA AAA+ ATPase C terminal KM397_22020 PF16193 AAA C-terminal domain KM397_22020 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM397_22030 PF00899 ThiF family KM397_22035 PF01336 OB-fold nucleic acid binding domain KM397_22035 PF00152 tRNA synthetases class II (D, K and N) KM397_22035 PF02938 GAD domain KM397_22040 PF13393 Histidyl-tRNA synthetase KM397_22040 PF03129 Anticodon binding domain KM397_22050 PF02580 D-Tyr-tRNA(Tyr) deacylase KM397_22055 PF02824 TGS domain KM397_22055 PF13291 ACT domain KM397_22055 PF04607 Region found in RelA / SpoT proteins KM397_22060 PF00156 Phosphoribosyl transferase domain KM397_22065 PF01368 DHH family KM397_22065 PF02272 DHHA1 domain KM397_22065 PF17768 RecJ OB domain KM397_22065 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KM397_22070 PF01545 Cation efflux family KM397_22070 PF16916 Dimerisation domain of Zinc Transporter KM397_22075 PF07549 SecD/SecF GG Motif KM397_22075 PF02355 Protein export membrane protein KM397_22080 PF13797 Post-transcriptional regulator KM397_22085 PF14667 Polysaccharide biosynthesis C-terminal domain KM397_22085 PF01943 Polysaccharide biosynthesis protein KM397_22090 PF04239 Protein of unknown function (DUF421) KM397_22100 PF02699 Preprotein translocase subunit KM397_22105 PF01702 Queuine tRNA-ribosyltransferase KM397_22110 PF02547 Queuosine biosynthesis protein KM397_22115 PF11146 Protein of unknown function (DUF2905) KM397_22120 PF17864 RuvB AAA lid domain KM397_22120 PF05491 RuvB C-terminal winged helix domain KM397_22120 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM397_22125 PF07499 RuvA, C-terminal domain KM397_22125 PF01330 RuvA N terminal domain KM397_22130 PF01497 Periplasmic binding protein KM397_22140 PF00892 EamA-like transporter family KM397_22145 PF00892 EamA-like transporter family KM397_22150 PF01022 Bacterial regulatory protein, arsR family KM397_22165 PF01476 LysM domain KM397_22170 PF02445 Quinolinate synthetase A protein KM397_22175 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KM397_22175 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KM397_22180 PF00890 FAD binding domain KM397_22180 PF02910 Fumarate reductase flavoprotein C-term KM397_22185 PF00266 Aminotransferase class-V KM397_22190 PF02829 3H domain KM397_22190 PF08279 HTH domain KM397_22195 PF03475 3-alpha domain KM397_22195 PF03473 MOSC domain KM397_22200 PF01842 ACT domain KM397_22200 PF00800 Prephenate dehydratase KM397_22205 PF02687 FtsX-like permease family KM397_22210 PF02687 FtsX-like permease family KM397_22215 PF00005 ABC transporter KM397_22225 PF00072 Response regulator receiver domain KM397_22225 PF00486 Transcriptional regulatory protein, C terminal KM397_22230 PF09269 Domain of unknown function (DUF1967) KM397_22230 PF01926 50S ribosome-binding GTPase KM397_22230 PF01018 GTP1/OBG KM397_22235 PF14682 Sporulation initiation phospho-transferase B, C-terminal KM397_22235 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM397_22240 PF01016 Ribosomal L27 protein KM397_22245 PF04327 Cysteine protease Prp KM397_22250 PF00829 Ribosomal prokaryotic L21 protein KM397_22255 PF10150 Ribonuclease E/G family KM397_22255 PF00575 S1 RNA binding domain KM397_22260 PF02163 Peptidase family M50 KM397_22265 PF01551 Peptidase family M23 KM397_22270 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KM397_22275 PF03775 Septum formation inhibitor MinC, C-terminal domain KM397_22285 PF04085 rod shape-determining protein MreC KM397_22295 PF04002 RadC-like JAB domain KM397_22300 PF02545 Maf-like protein KM397_22310 PF02875 Mur ligase family, glutamate ligase domain KM397_22310 PF08245 Mur ligase middle domain KM397_22315 PF00133 tRNA synthetases class I (I, L, M and V) KM397_22315 PF08264 Anticodon-binding domain of tRNA KM397_22315 PF10458 Valyl tRNA synthetase tRNA binding arm KM397_22325 PF01476 LysM domain KM397_22330 PF00202 Aminotransferase class-III KM397_22335 PF00490 Delta-aminolevulinic acid dehydratase KM397_22340 PF02602 Uroporphyrinogen-III synthase HemD KM397_22345 PF03900 Porphobilinogen deaminase, C-terminal domain KM397_22345 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KM397_22350 PF01578 Cytochrome C assembly protein KM397_22355 PF01488 Shikimate / quinate 5-dehydrogenase KM397_22355 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KM397_22355 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KM397_22360 PF01047 MarR family KM397_22365 PF02566 OsmC-like protein KM397_22370 PF01926 50S ribosome-binding GTPase KM397_22375 PF00004 ATPase family associated with various cellular activities (AAA) KM397_22375 PF05362 Lon protease (S16) C-terminal proteolytic domain KM397_22375 PF02190 ATP-dependent protease La (LON) substrate-binding domain KM397_22380 PF00004 ATPase family associated with various cellular activities (AAA) KM397_22380 PF05362 Lon protease (S16) C-terminal proteolytic domain KM397_22385 PF07724 AAA domain (Cdc48 subfamily) KM397_22385 PF06689 ClpX C4-type zinc finger KM397_22385 PF10431 C-terminal, D2-small domain, of ClpB protein KM397_22390 PF05697 Bacterial trigger factor protein (TF) KM397_22390 PF05698 Bacterial trigger factor protein (TF) C-terminus KM397_22390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM397_22405 PF11724 YvbH-like oligomerisation region KM397_22405 PF08000 Bacterial PH domain KM397_22425 PF12850 Calcineurin-like phosphoesterase superfamily domain KM397_22430 PF01725 Ham1 family KM397_22435 PF03725 3' exoribonuclease family, domain 2 KM397_22435 PF01138 3' exoribonuclease family, domain 1 KM397_22440 PF10646 Sporulation and spore germination KM397_22445 PF01177 Asp/Glu/Hydantoin racemase KM397_22450 PF07690 Major Facilitator Superfamily KM397_22460 PF00440 Bacterial regulatory proteins, tetR family KM397_22475 PF00196 Bacterial regulatory proteins, luxR family KM397_22480 PF00860 Permease family KM397_22490 PF07969 Amidohydrolase family KM397_22495 PF07969 Amidohydrolase family KM397_22500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_22505 PF12911 N-terminal TM domain of oligopeptide transport permease C KM397_22505 PF00528 Binding-protein-dependent transport system inner membrane component KM397_22510 PF00528 Binding-protein-dependent transport system inner membrane component KM397_22515 PF00005 ABC transporter KM397_22515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM397_22520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM397_22520 PF00005 ABC transporter KM397_22525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_22525 PF06580 Histidine kinase KM397_22525 PF07694 5TMR of 5TMR-LYT KM397_22530 PF00072 Response regulator receiver domain KM397_22530 PF04397 LytTr DNA-binding domain KM397_22545 PF04024 PspC domain KM397_22550 PF07883 Cupin domain KM397_22550 PF01381 Helix-turn-helix KM397_22555 PF13536 Putative multidrug resistance efflux transporter KM397_22560 PF00230 Major intrinsic protein KM397_22565 PF02082 Transcriptional regulator KM397_22575 PF00005 ABC transporter KM397_22575 PF13732 Domain of unknown function (DUF4162) KM397_22580 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KM397_22590 PF01618 MotA/TolQ/ExbB proton channel family KM397_22595 PF02557 D-alanyl-D-alanine carboxypeptidase KM397_22600 PF03061 Thioesterase superfamily KM397_22605 PF13085 2Fe-2S iron-sulfur cluster binding domain KM397_22605 PF13183 4Fe-4S dicluster domain KM397_22610 PF00890 FAD binding domain KM397_22610 PF02910 Fumarate reductase flavoprotein C-term KM397_22615 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KM397_22620 PF10702 Protein of unknown function (DUF2507) KM397_22625 PF01541 GIY-YIG catalytic domain KM397_22625 PF02151 UvrB/uvrC motif KM397_22625 PF08459 UvrC Helix-hairpin-helix N-terminal KM397_22630 PF00085 Thioredoxin KM397_22635 PF01012 Electron transfer flavoprotein domain KM397_22635 PF00766 Electron transfer flavoprotein FAD-binding domain KM397_22640 PF01012 Electron transfer flavoprotein domain KM397_22645 PF00378 Enoyl-CoA hydratase/isomerase KM397_22650 PF08359 YsiA-like protein, C-terminal region KM397_22650 PF00440 Bacterial regulatory proteins, tetR family KM397_22655 PF13193 AMP-binding enzyme C-terminal domain KM397_22655 PF00501 AMP-binding enzyme KM397_22665 PF01497 Periplasmic binding protein KM397_22670 PF01032 FecCD transport family KM397_22675 PF05163 DinB family KM397_22705 PF00005 ABC transporter KM397_22710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_22710 PF00512 His Kinase A (phospho-acceptor) domain KM397_22715 PF00072 Response regulator receiver domain KM397_22715 PF00486 Transcriptional regulatory protein, C terminal KM397_22725 PF09962 Uncharacterized conserved protein (DUF2196) KM397_22730 PF10672 S-adenosylmethionine-dependent methyltransferase KM397_22730 PF17785 PUA-like domain KM397_22740 PF03992 Antibiotic biosynthesis monooxygenase KM397_22745 PF04203 Sortase domain KM397_22750 PF00005 ABC transporter KM397_22755 PF01032 FecCD transport family KM397_22760 PF01497 Periplasmic binding protein KM397_22765 PF05031 Iron Transport-associated domain KM397_22775 PF05031 Iron Transport-associated domain KM397_22780 PF05525 Branched-chain amino acid transport protein KM397_22785 PF01479 S4 domain KM397_22785 PF00849 RNA pseudouridylate synthase KM397_22790 PF00488 MutS domain V KM397_22790 PF01713 Smr domain KM397_22795 PF14791 DNA polymerase beta thumb KM397_22795 PF14716 Helix-hairpin-helix domain KM397_22795 PF02811 PHP domain KM397_22800 PF02674 Colicin V production protein KM397_22805 PF05164 Cell division protein ZapA KM397_22810 PF11858 Domain of unknown function (DUF3378) KM397_22810 PF01351 Ribonuclease HII KM397_22830 PF00152 tRNA synthetases class II (D, K and N) KM397_22830 PF01336 OB-fold nucleic acid binding domain KM397_22835 PF01588 Putative tRNA binding domain KM397_22835 PF03147 Ferredoxin-fold anticodon binding domain KM397_22835 PF03484 tRNA synthetase B5 domain KM397_22835 PF03483 B3/4 domain KM397_22835 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KM397_22840 PF01409 tRNA synthetases class II core domain (F) KM397_22840 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KM397_22845 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM397_22845 PF00588 SpoU rRNA Methylase family KM397_22850 PF14098 Small, acid-soluble spore protein I KM397_22855 PF01966 HD domain KM397_22880 PF07690 Major Facilitator Superfamily KM397_22890 PF00440 Bacterial regulatory proteins, tetR family KM397_22890 PF16859 Tetracyclin repressor-like, C-terminal domain KM397_22895 PF05343 M42 glutamyl aminopeptidase KM397_22905 PF00453 Ribosomal protein L20 KM397_22910 PF01632 Ribosomal protein L35 KM397_22915 PF00707 Translation initiation factor IF-3, C-terminal domain KM397_22915 PF05198 Translation initiation factor IF-3, N-terminal domain KM397_22920 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM397_22920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM397_22920 PF02824 TGS domain KM397_22920 PF03129 Anticodon binding domain KM397_22925 PF08812 YtxC-like family KM397_22930 PF01695 IstB-like ATP binding protein KM397_22930 PF07319 Primosomal protein DnaI N-terminus KM397_22935 PF07261 Replication initiation and membrane attachment KM397_22940 PF03477 ATP cone domain KM397_22945 PF02675 S-adenosylmethionine decarboxylase KM397_22950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM397_22950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM397_22955 PF01121 Dephospho-CoA kinase KM397_22960 PF02659 Putative manganese efflux pump KM397_22965 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KM397_22965 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KM397_22965 PF06827 Zinc finger found in FPG and IleRS KM397_22970 PF01367 5'-3' exonuclease, C-terminal SAM fold KM397_22970 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM397_22970 PF00476 DNA polymerase family A KM397_22975 PF00989 PAS fold KM397_22975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_22975 PF16736 Single Cache-like KM397_22975 PF00512 His Kinase A (phospho-acceptor) domain KM397_22980 PF00072 Response regulator receiver domain KM397_22980 PF00486 Transcriptional regulatory protein, C terminal KM397_22995 PF00056 lactate/malate dehydrogenase, NAD binding domain KM397_22995 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM397_23000 PF00180 Isocitrate/isopropylmalate dehydrogenase KM397_23005 PF00285 Citrate synthase, C-terminal domain KM397_23010 PF04284 Protein of unknown function (DUF441) KM397_23015 PF01594 AI-2E family transporter KM397_23020 PF04186 FxsA cytoplasmic membrane protein KM397_23025 PF02887 Pyruvate kinase, alpha/beta domain KM397_23025 PF00224 Pyruvate kinase, barrel domain KM397_23025 PF00391 PEP-utilising enzyme, mobile domain KM397_23030 PF00365 Phosphofructokinase KM397_23035 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KM397_23040 PF17848 Acetyl-coA carboxylase zinc finger domain KM397_23040 PF01039 Carboxyl transferase domain KM397_23045 PF00392 Bacterial regulatory proteins, gntR family KM397_23050 PF03949 Malic enzyme, NAD binding domain KM397_23050 PF00390 Malic enzyme, N-terminal domain KM397_23055 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM397_23055 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM397_23055 PF14579 Helix-hairpin-helix motif KM397_23055 PF02811 PHP domain KM397_23055 PF01336 OB-fold nucleic acid binding domain KM397_23060 PF14034 Sporulation protein YtrH KM397_23070 PF01368 DHH family KM397_23070 PF02272 DHHA1 domain KM397_23075 PF14007 YtpI-like protein KM397_23090 PF00571 CBS domain KM397_23090 PF07085 DRTGG domain KM397_23090 PF03061 Thioesterase superfamily KM397_23090 PF00392 Bacterial regulatory proteins, gntR family KM397_23105 PF00557 Metallopeptidase family M24 KM397_23105 PF01321 Creatinase/Prolidase N-terminal domain KM397_23110 PF11518 Protein of unknown function (DUF3221) KM397_23140 PF12746 GNAT acetyltransferase KM397_23145 PF07883 Cupin domain KM397_23155 PF01381 Helix-turn-helix KM397_23165 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM397_23165 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM397_23175 PF00582 Universal stress protein family KM397_23195 PF14698 Argininosuccinate lyase C-terminal KM397_23195 PF00206 Lyase KM397_23200 PF00764 Arginosuccinate synthase KM397_23215 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM397_23215 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM397_23220 PF12787 EcsC protein family KM397_23235 PF00871 Acetokinase family KM397_23240 PF02384 N-6 DNA Methylase KM397_23245 PF08534 Redoxin KM397_23250 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM397_23260 PF01513 ATP-NAD kinase KM397_23265 PF07969 Amidohydrolase family KM397_23280 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM397_23285 PF02568 Thiamine biosynthesis protein (ThiI) KM397_23285 PF02926 THUMP domain KM397_23290 PF00266 Aminotransferase class-V KM397_23295 PF06160 Septation ring formation regulator, EzrA KM397_23300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM397_23300 PF03466 LysR substrate binding domain KM397_23305 PF00892 EamA-like transporter family KM397_23315 PF13185 GAF domain KM397_23320 PF01053 Cys/Met metabolism PLP-dependent enzyme KM397_23325 PF00163 Ribosomal protein S4/S9 N-terminal domain KM397_23325 PF01479 S4 domain KM397_23340 PF01479 S4 domain KM397_23340 PF00579 tRNA synthetases class I (W and Y) KM397_23350 PF04542 Sigma-70 region 2 KM397_23350 PF08281 Sigma-70, region 4 KM397_23360 PF00501 AMP-binding enzyme KM397_23360 PF13193 AMP-binding enzyme C-terminal domain KM397_23365 PF00583 Acetyltransferase (GNAT) family KM397_23370 PF00571 CBS domain KM397_23375 PF00850 Histone deacetylase domain KM397_23385 PF00072 Response regulator receiver domain KM397_23385 PF00486 Transcriptional regulatory protein, C terminal KM397_23390 PF00672 HAMP domain KM397_23390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_23390 PF00512 His Kinase A (phospho-acceptor) domain KM397_23390 PF13426 PAS domain KM397_23395 PF12796 Ankyrin repeats (3 copies) KM397_23400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM397_23405 PF01741 Large-conductance mechanosensitive channel, MscL KM397_23430 PF00356 Bacterial regulatory proteins, lacI family KM397_23435 PF07537 CamS sex pheromone cAM373 precursor KM397_23440 PF11009 Protein of unknown function (DUF2847) KM397_23450 PF02073 Thermophilic metalloprotease (M29) KM397_23470 PF13302 Acetyltransferase (GNAT) domain KM397_23475 PF08245 Mur ligase middle domain KM397_23475 PF01225 Mur ligase family, catalytic domain KM397_23475 PF02875 Mur ligase family, glutamate ligase domain KM397_23485 PF09397 Ftsk gamma domain KM397_23485 PF01580 FtsK/SpoIIIE family KM397_23485 PF17854 FtsK alpha domain KM397_23495 PF14794 Domain of unknown function (DUF4479) KM397_23495 PF01588 Putative tRNA binding domain KM397_23500 PF07285 Protein of unknown function (DUF1444) KM397_23505 PF00085 Thioredoxin KM397_23510 PF01931 Protein of unknown function DUF84 KM397_23515 PF05343 M42 glutamyl aminopeptidase KM397_23525 PF00753 Metallo-beta-lactamase superfamily KM397_23530 PF02390 Putative methyltransferase KM397_23535 PF14165 YtzH-like protein KM397_23540 PF01636 Phosphotransferase enzyme family KM397_23545 PF00128 Alpha amylase, catalytic domain KM397_23545 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM397_23545 PF17999 Pullulanase N1-terminal domain KM397_23550 PF02834 LigT like Phosphoesterase KM397_23560 PF08220 DeoR-like helix-turn-helix domain KM397_23565 PF00849 RNA pseudouridylate synthase KM397_23565 PF01479 S4 domain KM397_23570 PF01943 Polysaccharide biosynthesis protein KM397_23570 PF14667 Polysaccharide biosynthesis C-terminal domain KM397_23580 PF07690 Major Facilitator Superfamily KM397_23585 PF01022 Bacterial regulatory protein, arsR family KM397_23590 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KM397_23600 PF10957 Sporulation protein Cse60 KM397_23610 PF02559 CarD-like/TRCF domain KM397_23620 PF06800 Sugar transport protein KM397_23635 PF02391 MoaE protein KM397_23640 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KM397_23645 PF03453 MoeA N-terminal region (domain I and II) KM397_23645 PF00994 Probable molybdopterin binding domain KM397_23645 PF03454 MoeA C-terminal region (domain IV) KM397_23650 PF01967 MoaC family KM397_23655 PF00899 ThiF family KM397_23680 PF00581 Rhodanese-like domain KM397_23690 PF00561 alpha/beta hydrolase fold KM397_23695 PF03323 Bacillus/Clostridium GerA spore germination protein KM397_23700 PF03845 Spore germination protein KM397_23725 PF08264 Anticodon-binding domain of tRNA KM397_23725 PF09334 tRNA synthetases class I (M) KM397_23725 PF13603 Leucyl-tRNA synthetase, Domain 2 KM397_23725 PF00133 tRNA synthetases class I (I, L, M and V) KM397_23730 PF07690 Major Facilitator Superfamily KM397_23735 PF00999 Sodium/hydrogen exchanger family KM397_23740 PF02080 TrkA-C domain KM397_23745 PF00589 Phage integrase family KM397_23755 PF00005 ABC transporter KM397_23760 PF07786 Protein of unknown function (DUF1624) KM397_23760 PF04235 Protein of unknown function (DUF418) KM397_23770 PF10732 Protein of unknown function (DUF2524) KM397_23775 PF16199 Radical_SAM C-terminal domain KM397_23775 PF04055 Radical SAM superfamily KM397_23780 PF06962 Putative rRNA methylase KM397_23785 PF13732 Domain of unknown function (DUF4162) KM397_23785 PF00005 ABC transporter KM397_23795 PF01177 Asp/Glu/Hydantoin racemase KM397_23810 PF10776 Protein of unknown function (DUF2600) KM397_23815 PF12146 Serine aminopeptidase, S33 KM397_23820 PF00132 Bacterial transferase hexapeptide (six repeats) KM397_23825 PF01569 PAP2 superfamily KM397_23830 PF13439 Glycosyltransferase Family 4 KM397_23830 PF00534 Glycosyl transferases group 1 KM397_23835 PF12804 MobA-like NTP transferase domain KM397_23840 PF00994 Probable molybdopterin binding domain KM397_23855 PF02773 S-adenosylmethionine synthetase, C-terminal domain KM397_23855 PF00438 S-adenosylmethionine synthetase, N-terminal domain KM397_23855 PF02772 S-adenosylmethionine synthetase, central domain KM397_23860 PF01293 Phosphoenolpyruvate carboxykinase KM397_23895 PF01784 NIF3 (NGG1p interacting factor 3) KM397_23900 PF13426 PAS domain KM397_23900 PF13188 PAS domain KM397_23900 PF00989 PAS fold KM397_23900 PF00512 His Kinase A (phospho-acceptor) domain KM397_23900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_23905 PF00512 His Kinase A (phospho-acceptor) domain KM397_23905 PF00989 PAS fold KM397_23905 PF08447 PAS fold KM397_23905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_23910 PF00561 alpha/beta hydrolase fold KM397_23910 PF08386 TAP-like protein KM397_23935 PF00005 ABC transporter KM397_23940 PF00528 Binding-protein-dependent transport system inner membrane component KM397_23965 PF00293 NUDIX domain KM397_23985 PF02664 S-Ribosylhomocysteinase (LuxS) KM397_23990 PF01809 Putative membrane protein insertion efficiency factor KM397_23995 PF00484 Carbonic anhydrase KM397_24000 PF01654 Cytochrome bd terminal oxidase subunit I KM397_24005 PF02322 Cytochrome bd terminal oxidase subunit II KM397_24010 PF10676 Spore germination protein gerPA/gerPF KM397_24025 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM397_24025 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM397_24050 PF04012 PspA/IM30 family KM397_24065 PF07670 Nucleoside recognition KM397_24065 PF07664 Ferrous iron transport protein B C terminus KM397_24065 PF17910 FeoB cytosolic helical domain KM397_24065 PF02421 Ferrous iron transport protein B KM397_24075 PF09515 Thiamine transporter protein (Thia_YuaJ) KM397_24080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_24080 PF00672 HAMP domain KM397_24080 PF00512 His Kinase A (phospho-acceptor) domain KM397_24085 PF00486 Transcriptional regulatory protein, C terminal KM397_24085 PF00072 Response regulator receiver domain KM397_24110 PF00156 Phosphoribosyl transferase domain KM397_24115 PF00781 Diacylglycerol kinase catalytic domain KM397_24135 PF00248 Aldo/keto reductase family KM397_24150 PF09335 SNARE associated Golgi protein KM397_24155 PF00398 Ribosomal RNA adenine dimethylase KM397_24160 PF02687 FtsX-like permease family KM397_24165 PF00005 ABC transporter KM397_24170 PF12833 Helix-turn-helix domain KM397_24170 PF06445 GyrI-like small molecule binding domain KM397_24175 PF00486 Transcriptional regulatory protein, C terminal KM397_24175 PF00072 Response regulator receiver domain KM397_24180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_24190 PF02687 FtsX-like permease family KM397_24195 PF00005 ABC transporter KM397_24210 PF02447 GntP family permease KM397_24215 PF00392 Bacterial regulatory proteins, gntR family KM397_24215 PF07702 UTRA domain KM397_24225 PF07071 KDGP aldolase KM397_24230 PF03841 L-seryl-tRNA selenium transferase KM397_24235 PF01979 Amidohydrolase family KM397_24250 PF02557 D-alanyl-D-alanine carboxypeptidase KM397_24255 PF00512 His Kinase A (phospho-acceptor) domain KM397_24255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_24260 PF00072 Response regulator receiver domain KM397_24260 PF00486 Transcriptional regulatory protein, C terminal KM397_24265 PF13378 Enolase C-terminal domain-like KM397_24265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM397_24270 PF00501 AMP-binding enzyme KM397_24270 PF13193 AMP-binding enzyme C-terminal domain KM397_24275 PF00378 Enoyl-CoA hydratase/isomerase KM397_24280 PF00561 alpha/beta hydrolase fold KM397_24285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM397_24285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM397_24285 PF16582 Middle domain of thiamine pyrophosphate KM397_24290 PF00425 chorismate binding enzyme KM397_24295 PF01040 UbiA prenyltransferase family KM397_24300 PF01258 Prokaryotic dksA/traR C4-type zinc finger KM397_24305 PF00313 'Cold-shock' DNA-binding domain KM397_24320 PF00343 Carbohydrate phosphorylase KM397_24325 PF00534 Glycosyl transferases group 1 KM397_24325 PF08323 Starch synthase catalytic domain KM397_24330 PF00483 Nucleotidyl transferase KM397_24335 PF00483 Nucleotidyl transferase KM397_24340 PF00128 Alpha amylase, catalytic domain KM397_24340 PF02806 Alpha amylase, C-terminal all-beta domain KM397_24340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM397_24355 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM397_24355 PF00056 lactate/malate dehydrogenase, NAD binding domain KM397_24450 PF05698 Bacterial trigger factor protein (TF) C-terminus KM397_24450 PF05697 Bacterial trigger factor protein (TF) KM397_24485 PF02308 MgtC family KM397_24490 PF07885 Ion channel KM397_24490 PF02254 TrkA-N domain KM397_24495 PF08868 YugN-like family KM397_24500 PF00342 Phosphoglucose isomerase KM397_24505 PF04070 Domain of unknown function (DUF378) KM397_24510 PF00575 S1 RNA binding domain KM397_24515 PF00155 Aminotransferase class I and II KM397_24520 PF01037 Lrp/AsnC ligand binding domain KM397_24525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM397_24525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM397_24530 PF00561 alpha/beta hydrolase fold KM397_24530 PF08386 TAP-like protein KM397_24540 PF00155 Aminotransferase class I and II KM397_24555 PF08810 Kinase associated protein B KM397_24560 PF00929 Exonuclease KM397_24565 PF03600 Citrate transporter KM397_24580 PF03129 Anticodon binding domain KM397_24580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM397_24585 PF03061 Thioesterase superfamily KM397_24595 PF02632 BioY family KM397_24605 PF00483 Nucleotidyl transferase KM397_24610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM397_24610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM397_24610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM397_24610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM397_24615 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM397_24615 PF10372 Bacterial membrane-spanning protein N-terminus KM397_24620 PF00883 Cytosol aminopeptidase family, catalytic domain KM397_24620 PF02789 Cytosol aminopeptidase family, N-terminal domain KM397_24625 PF06725 3D domain KM397_24635 PF00293 NUDIX domain KM397_24635 PF13344 Haloacid dehalogenase-like hydrolase KM397_24640 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM397_24645 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM397_24655 PF06445 GyrI-like small molecule binding domain KM397_24670 PF04463 Protein of unknown function (DUF523) KM397_24690 PF01521 Iron-sulphur cluster biosynthesis KM397_24695 PF01678 Diaminopimelate epimerase KM397_24700 PF07293 Protein of unknown function (DUF1450) KM397_24705 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM397_24715 PF09383 NIL domain KM397_24715 PF00005 ABC transporter KM397_24720 PF03649 Uncharacterised protein family (UPF0014) KM397_24725 PF08274 PhnA Zinc-Ribbon KM397_24725 PF03831 PhnA domain KM397_24760 PF13427 Domain of unknown function (DUF4111) KM397_24760 PF01909 Nucleotidyltransferase domain KM397_24765 PF07315 Protein of unknown function (DUF1462) KM397_24770 PF01106 NifU-like domain KM397_24785 PF04608 Phosphatidylglycerophosphatase A KM397_24795 PF02525 Flavodoxin-like fold KM397_24800 PF13344 Haloacid dehalogenase-like hydrolase KM397_24810 PF01934 Protein of unknown function DUF86 KM397_24815 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM397_24830 PF06265 Protein of unknown function (DUF1027) KM397_24835 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM397_24840 PF13411 MerR HTH family regulatory protein KM397_24840 PF07739 TipAS antibiotic-recognition domain KM397_24845 PF10086 YhfC intramembrane metalloprotease KM397_24865 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KM397_24865 PF04055 Radical SAM superfamily KM397_24870 PF01551 Peptidase family M23 KM397_24880 PF08827 Domain of unknown function (DUF1805) KM397_24885 PF02872 5'-nucleotidase, C-terminal domain KM397_24890 PF03551 Transcriptional regulator PadR-like family KM397_24895 PF04892 VanZ like family KM397_24900 PF01458 Uncharacterized protein family (UPF0051) KM397_24905 PF01592 NifU-like N terminal domain KM397_24910 PF00266 Aminotransferase class-V KM397_24915 PF01458 Uncharacterized protein family (UPF0051) KM397_24920 PF00005 ABC transporter KM397_24925 PF03180 NLPA lipoprotein KM397_24930 PF03180 NLPA lipoprotein KM397_24935 PF00528 Binding-protein-dependent transport system inner membrane component KM397_24940 PF09383 NIL domain KM397_24940 PF00005 ABC transporter KM397_24950 PF00085 Thioredoxin KM397_24955 PF01751 Toprim domain KM397_24960 PF01597 Glycine cleavage H-protein KM397_24965 PF03960 ArsC family KM397_25010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM397_25010 PF00056 lactate/malate dehydrogenase, NAD binding domain KM397_25030 PF13305 Tetracyclin repressor-like, C-terminal domain KM397_25030 PF00440 Bacterial regulatory proteins, tetR family KM397_25035 PF00753 Metallo-beta-lactamase superfamily KM397_25040 PF02770 Acyl-CoA dehydrogenase, middle domain KM397_25040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM397_25040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM397_25045 PF02803 Thiolase, C-terminal domain KM397_25045 PF00108 Thiolase, N-terminal domain KM397_25050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM397_25050 PF00378 Enoyl-CoA hydratase/isomerase KM397_25050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM397_25055 PF14115 YuzL-like protein KM397_25060 PF07943 Penicillin-binding protein 5, C-terminal domain KM397_25060 PF00768 D-alanyl-D-alanine carboxypeptidase KM397_25065 PF01619 Proline dehydrogenase KM397_25070 PF10835 Protein of unknown function (DUF2573) KM397_25075 PF01910 Thiamine-binding protein KM397_25080 PF02743 Cache domain KM397_25080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM397_25080 PF00672 HAMP domain KM397_25100 PF07690 Major Facilitator Superfamily KM397_25105 PF13520 Amino acid permease KM397_25115 PF02096 60Kd inner membrane protein KM397_25125 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM397_25125 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM397_25160 PF09335 SNARE associated Golgi protein KM397_25170 PF17969 L,D-transpeptidase C-terminal domain KM397_25170 PF03734 L,D-transpeptidase catalytic domain KM397_25175 PF00072 Response regulator receiver domain KM397_25175 PF00486 Transcriptional regulatory protein, C terminal KM397_25180 PF00989 PAS fold KM397_25180 PF00512 His Kinase A (phospho-acceptor) domain KM397_25180 PF16736 Single Cache-like KM397_25180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_25190 PF09334 tRNA synthetases class I (M) KM397_25190 PF08264 Anticodon-binding domain of tRNA KM397_25200 PF02743 Cache domain KM397_25200 PF00672 HAMP domain KM397_25200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM397_25205 PF01883 Iron-sulfur cluster assembly protein KM397_25210 PF03413 Peptidase propeptide and YPEB domain KM397_25210 PF01447 Thermolysin metallopeptidase, catalytic domain KM397_25210 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM397_25210 PF07504 Fungalysin/Thermolysin Propeptide Motif KM397_25215 PF02678 Pirin KM397_25215 PF17954 Quercetinase C-terminal cupin domain KM397_25220 PF01047 MarR family KM397_25230 PF00999 Sodium/hydrogen exchanger family KM397_25235 PF02080 TrkA-C domain KM397_25240 PF01235 Sodium:alanine symporter family KM397_25245 PF00210 Ferritin-like domain KM397_25260 PF03641 Possible lysine decarboxylase KM397_25270 PF00210 Ferritin-like domain KM397_25280 PF01773 Na+ dependent nucleoside transporter N-terminus KM397_25280 PF07662 Na+ dependent nucleoside transporter C-terminus KM397_25285 PF01773 Na+ dependent nucleoside transporter N-terminus KM397_25285 PF07662 Na+ dependent nucleoside transporter C-terminus KM397_25290 PF01235 Sodium:alanine symporter family KM397_25295 PF01235 Sodium:alanine symporter family KM397_25300 PF13460 NAD(P)H-binding KM397_25315 PF00248 Aldo/keto reductase family KM397_25320 PF07690 Major Facilitator Superfamily KM397_25325 PF01638 HxlR-like helix-turn-helix KM397_25330 PF07849 Protein of unknown function (DUF1641) KM397_25335 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM397_25340 PF01479 S4 domain KM397_25340 PF00579 tRNA synthetases class I (W and Y) KM397_25345 PF01565 FAD binding domain KM397_25345 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM397_25355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM397_25355 PF17202 Single cache domain 3 KM397_25355 PF00672 HAMP domain KM397_25365 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM397_25370 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM397_25385 PF13302 Acetyltransferase (GNAT) domain KM397_25390 PF06146 Phosphate-starvation-inducible E KM397_25405 PF00005 ABC transporter KM397_25410 PF01032 FecCD transport family KM397_25415 PF01032 FecCD transport family KM397_25425 PF00486 Transcriptional regulatory protein, C terminal KM397_25425 PF00072 Response regulator receiver domain KM397_25435 PF01668 SmpB protein KM397_25440 PF00575 S1 RNA binding domain KM397_25440 PF00773 RNB domain KM397_25440 PF17876 Cold shock domain KM397_25440 PF08206 Ribonuclease B OB domain KM397_25445 PF12146 Serine aminopeptidase, S33 KM397_25450 PF03840 Preprotein translocase SecG subunit KM397_25455 PF04172 LrgB-like family KM397_25460 PF03788 LrgA family KM397_25465 PF01156 Inosine-uridine preferring nucleoside hydrolase KM397_25555 PF04860 Phage portal protein KM397_25580 PF02899 Phage integrase, N-terminal SAM-like domain KM397_25580 PF00589 Phage integrase family KM397_25585 PF00113 Enolase, C-terminal TIM barrel domain KM397_25585 PF03952 Enolase, N-terminal domain KM397_25590 PF01676 Metalloenzyme superfamily KM397_25590 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KM397_25595 PF00121 Triosephosphate isomerase KM397_25600 PF00162 Phosphoglycerate kinase KM397_25605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM397_25605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM397_25610 PF04198 Putative sugar-binding domain KM397_25620 PF00309 Sigma-54 factor, Activator interacting domain (AID) KM397_25620 PF04963 Sigma-54 factor, core binding domain KM397_25620 PF04552 Sigma-54, DNA binding domain KM397_25640 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM397_25645 PF07451 Stage V sporulation protein AD (SpoVAD) KM397_25650 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM397_25660 PF04239 Protein of unknown function (DUF421) KM397_25665 PF00574 Clp protease KM397_25670 PF00381 PTS HPr component phosphorylation site KM397_25675 PF02650 WhiA C-terminal HTH domain KM397_25675 PF14527 WhiA LAGLIDADG-like domain KM397_25675 PF10298 WhiA N-terminal LAGLIDADG-like domain KM397_25680 PF01933 Uncharacterised protein family UPF0052 KM397_25685 PF03668 P-loop ATPase protein family KM397_25690 PF00293 NUDIX domain KM397_25700 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM397_25710 PF14602 Hexapeptide repeat of succinyl-transferase KM397_25715 PF13419 Haloacid dehalogenase-like hydrolase KM397_25720 PF01790 Prolipoprotein diacylglyceryl transferase KM397_25725 PF07475 HPr Serine kinase C-terminal domain KM397_25725 PF02603 HPr Serine kinase N terminus KM397_25730 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KM397_25740 PF00005 ABC transporter KM397_25740 PF17755 UvrA DNA-binding domain KM397_25740 PF17760 UvrA interaction domain KM397_25745 PF00271 Helicase conserved C-terminal domain KM397_25745 PF04851 Type III restriction enzyme, res subunit KM397_25745 PF02151 UvrB/uvrC motif KM397_25745 PF12344 Ultra-violet resistance protein B KM397_25745 PF17757 UvrB interaction domain KM397_25765 PF07739 TipAS antibiotic-recognition domain KM397_25765 PF13411 MerR HTH family regulatory protein KM397_25790 PF03601 Conserved hypothetical protein 698 KM397_25795 PF03466 LysR substrate binding domain KM397_25795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM397_25800 PF13411 MerR HTH family regulatory protein KM397_25805 PF03358 NADPH-dependent FMN reductase KM397_25810 PF12848 ABC transporter KM397_25810 PF00005 ABC transporter KM397_25820 PF00005 ABC transporter KM397_25820 PF00664 ABC transporter transmembrane region KM397_25825 PF17820 PDZ domain KM397_25830 PF03572 Peptidase family S41 KM397_25830 PF17820 PDZ domain KM397_25830 PF01471 Putative peptidoglycan binding domain KM397_25835 PF18075 FtsX extracellular domain KM397_25835 PF02687 FtsX-like permease family KM397_25840 PF00005 ABC transporter KM397_25845 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM397_25855 PF02810 SEC-C motif KM397_25855 PF07517 SecA DEAD-like domain KM397_25855 PF01043 SecA preprotein cross-linking domain KM397_25855 PF07516 SecA Wing and Scaffold domain KM397_25860 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KM397_25860 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KM397_25865 PF00313 'Cold-shock' DNA-binding domain KM397_25875 PF00271 Helicase conserved C-terminal domain KM397_25875 PF04851 Type III restriction enzyme, res subunit KM397_25880 PF01476 LysM domain KM397_25880 PF00877 NlpC/P60 family KM397_25885 PF01638 HxlR-like helix-turn-helix KM397_25890 PF02645 Uncharacterised protein, DegV family COG1307 KM397_25895 PF01205 Uncharacterized protein family UPF0029 KM397_25895 PF09186 Domain of unknown function (DUF1949) KM397_25900 PF03816 Cell envelope-related transcriptional attenuator domain KM397_25905 PF02350 UDP-N-acetylglucosamine 2-epimerase KM397_25910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM397_25910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM397_25910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM397_25915 PF00953 Glycosyl transferase family 4 KM397_25920 PF01522 Polysaccharide deacetylase KM397_25925 PF00158 Sigma-54 interaction domain KM397_25925 PF00874 PRD domain KM397_25925 PF03610 PTS system fructose IIA component KM397_25935 PF02417 Chromate transporter KM397_25940 PF04794 YdjC-like protein KM397_25945 PF02056 Family 4 glycosyl hydrolase KM397_25945 PF11975 Family 4 glycosyl hydrolase C-terminal domain KM397_25950 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM397_25955 PF02378 Phosphotransferase system, EIIC KM397_25960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM397_25970 PF02675 S-adenosylmethionine decarboxylase KM397_25975 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM397_25980 PF02378 Phosphotransferase system, EIIC KM397_25985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM397_25990 PF00375 Sodium:dicarboxylate symporter family KM397_26000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM397_26010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM397_26010 PF03466 LysR substrate binding domain KM397_26030 PF01654 Cytochrome bd terminal oxidase subunit I KM397_26035 PF02322 Cytochrome bd terminal oxidase subunit II KM397_26040 PF02040 Arsenical pump membrane protein KM397_26045 PF13667 ThiC-associated domain KM397_26045 PF01964 Radical SAM ThiC family KM397_26050 PF02652 L-lactate permease KM397_26060 PF09988 Uncharacterized metal-binding protein (DUF2227) KM397_26070 PF00884 Sulfatase KM397_26075 PF01063 Amino-transferase class IV KM397_26085 PF07662 Na+ dependent nucleoside transporter C-terminus KM397_26085 PF01773 Na+ dependent nucleoside transporter N-terminus KM397_26100 PF02028 BCCT, betaine/carnitine/choline family transporter KM397_26105 PF01476 LysM domain KM397_26105 PF06725 3D domain KM397_26130 PF04434 SWIM zinc finger KM397_26135 PF12419 SNF2 Helicase protein KM397_26135 PF00271 Helicase conserved C-terminal domain KM397_26135 PF00176 SNF2 family N-terminal domain KM397_26165 PF04545 Sigma-70, region 4 KM397_26165 PF04542 Sigma-70 region 2 KM397_26170 PF04893 Yip1 domain KM397_26175 PF02687 FtsX-like permease family KM397_26175 PF12704 MacB-like periplasmic core domain KM397_26180 PF00005 ABC transporter KM397_26200 PF07690 Major Facilitator Superfamily KM397_26215 PF16736 Single Cache-like KM397_26215 PF00989 PAS fold KM397_26215 PF00512 His Kinase A (phospho-acceptor) domain KM397_26215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_26220 PF00486 Transcriptional regulatory protein, C terminal KM397_26220 PF00072 Response regulator receiver domain KM397_26225 PF16363 GDP-mannose 4,6 dehydratase KM397_26230 PF03816 Cell envelope-related transcriptional attenuator domain KM397_26235 PF07977 FabA-like domain KM397_26240 PF02350 UDP-N-acetylglucosamine 2-epimerase KM397_26245 PF00005 ABC transporter KM397_26245 PF08239 Bacterial SH3 domain KM397_26250 PF01061 ABC-2 type transporter KM397_26255 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM397_26255 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM397_26255 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM397_26300 PF12116 Stage III sporulation protein D KM397_26315 PF01551 Peptidase family M23 KM397_26325 PF00005 ABC transporter KM397_26335 PF08486 Stage II sporulation protein KM397_26340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM397_26350 PF06612 Protein of unknown function (DUF1146) KM397_26355 PF00361 Proton-conducting membrane transporter KM397_26360 PF00361 Proton-conducting membrane transporter KM397_26365 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus KM397_26365 PF00361 Proton-conducting membrane transporter KM397_26365 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM397_26370 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KM397_26375 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KM397_26385 PF00146 NADH dehydrogenase KM397_26390 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KM397_26395 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KM397_26400 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KM397_26405 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KM397_26410 PF03707 Bacterial signalling protein N terminal repeat KM397_26410 PF00990 Diguanylate cyclase, GGDEF domain KM397_26410 PF00563 EAL domain KM397_26425 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KM397_26425 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KM397_26430 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM397_26430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM397_26435 PF00231 ATP synthase KM397_26440 PF00306 ATP synthase alpha/beta chain, C terminal domain KM397_26440 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM397_26440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM397_26445 PF00213 ATP synthase delta (OSCP) subunit KM397_26450 PF00430 ATP synthase B/B' CF(0) KM397_26455 PF00137 ATP synthase subunit C KM397_26460 PF00119 ATP synthase A chain KM397_26465 PF03899 ATP synthase I chain KM397_26485 PF00464 Serine hydroxymethyltransferase KM397_26490 PF04260 Protein of unknown function (DUF436) KM397_26495 PF02502 Ribose/Galactose Isomerase KM397_26500 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM397_26505 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM397_26510 PF07681 DoxX KM397_26515 PF01613 Flavin reductase like domain KM397_26525 PF02659 Putative manganese efflux pump KM397_26530 PF01300 Telomere recombination KM397_26530 PF03481 Putative GTP-binding controlling metal-binding KM397_26540 PF09551 Stage II sporulation protein R (spore_II_R) KM397_26545 PF13847 Methyltransferase domain KM397_26545 PF17827 PrmC N-terminal domain KM397_26550 PF03462 PCRF domain KM397_26550 PF00472 RF-1 domain KM397_26555 PF00265 Thymidine kinase KM397_26560 PF01197 Ribosomal protein L31 KM397_26565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM397_26565 PF07498 Rho termination factor, N-terminal domain KM397_26565 PF07497 Rho termination factor, RNA-binding domain KM397_26570 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM397_26575 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM397_26580 PF01116 Fructose-bisphosphate aldolase class-II KM397_26585 PF00072 Response regulator receiver domain KM397_26590 PF10740 Domain of unknown function (DUF2529) KM397_26595 PF06418 CTP synthase N-terminus KM397_26595 PF00117 Glutamine amidotransferase class-I KM397_26600 PF05066 HB1, ASXL, restriction endonuclease HTH domain KM397_26610 PF02770 Acyl-CoA dehydrogenase, middle domain KM397_26610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM397_26610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM397_26615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM397_26615 PF02770 Acyl-CoA dehydrogenase, middle domain KM397_26615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM397_26620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM397_26620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM397_26625 PF02803 Thiolase, C-terminal domain KM397_26625 PF00108 Thiolase, N-terminal domain KM397_26630 PF02754 Cysteine-rich domain KM397_26630 PF13183 4Fe-4S dicluster domain KM397_26635 PF13091 PLD-like domain KM397_26640 PF03851 UV-endonuclease UvdE KM397_26645 PF00563 EAL domain KM397_26645 PF00990 Diguanylate cyclase, GGDEF domain KM397_26645 PF03707 Bacterial signalling protein N terminal repeat KM397_26665 PF00196 Bacterial regulatory proteins, luxR family KM397_26665 PF00072 Response regulator receiver domain KM397_26670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_26670 PF07730 Histidine kinase KM397_26680 PF00005 ABC transporter KM397_26685 PF00557 Metallopeptidase family M24 KM397_26695 PF02225 PA domain KM397_26695 PF04389 Peptidase family M28 KM397_26715 PF04542 Sigma-70 region 2 KM397_26715 PF08281 Sigma-70, region 4 KM397_26720 PF03485 Arginyl tRNA synthetase N terminal domain KM397_26720 PF05746 DALR anticodon binding domain KM397_26720 PF00750 tRNA synthetases class I (R) KM397_26725 PF09148 Domain of unknown function (DUF1934) KM397_26730 PF02016 LD-carboxypeptidase N-terminal domain KM397_26730 PF17676 LD-carboxypeptidase C-terminal domain KM397_26745 PF00491 Arginase family KM397_26750 PF17284 Spermidine synthase tetramerisation domain KM397_26755 PF07690 Major Facilitator Superfamily KM397_26760 PF13411 MerR HTH family regulatory protein KM397_26765 PF03009 Glycerophosphoryl diester phosphodiesterase family KM397_26770 PF00912 Transglycosylase KM397_26770 PF00905 Penicillin binding protein transpeptidase domain KM397_26775 PF08741 YwhD family KM397_26780 PF02163 Peptidase family M50 KM397_26785 PF01361 Tautomerase enzyme KM397_26790 PF01966 HD domain KM397_26795 PF01497 Periplasmic binding protein KM397_26800 PF00005 ABC transporter KM397_26805 PF01032 FecCD transport family KM397_26815 PF07293 Protein of unknown function (DUF1450) KM397_26830 PF03099 Biotin/lipoate A/B protein ligase family KM397_26835 PF01515 Phosphate acetyl/butaryl transferase KM397_26840 PF06778 Chlorite dismutase KM397_26845 PF07943 Penicillin-binding protein 5, C-terminal domain KM397_26845 PF00768 D-alanyl-D-alanine carboxypeptidase KM397_26850 PF07486 Cell Wall Hydrolase KM397_26855 PF09671 Spore coat protein (Spore_GerQ) KM397_26860 PF04241 Protein of unknown function (DUF423) KM397_26870 PF07885 Ion channel KM397_26870 PF02254 TrkA-N domain KM397_26875 PF00860 Permease family KM397_26885 PF12823 Domain of unknown function (DUF3817) KM397_26890 PF03167 Uracil DNA glycosylase superfamily KM397_26895 PF12679 ABC-2 family transporter protein KM397_26900 PF00005 ABC transporter KM397_26905 PF13472 GDSL-like Lipase/Acylhydrolase family KM397_26910 PF00356 Bacterial regulatory proteins, lacI family KM397_26910 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM397_26920 PF01842 ACT domain KM397_26920 PF00742 Homoserine dehydrogenase KM397_26920 PF03447 Homoserine dehydrogenase, NAD binding domain KM397_26925 PF04204 Homoserine O-succinyltransferase KM397_26930 PF01053 Cys/Met metabolism PLP-dependent enzyme KM397_26940 PF13419 Haloacid dehalogenase-like hydrolase KM397_26945 PF00027 Cyclic nucleotide-binding domain KM397_26950 PF02525 Flavodoxin-like fold KM397_26955 PF00196 Bacterial regulatory proteins, luxR family KM397_26955 PF00072 Response regulator receiver domain KM397_26965 PF08543 Phosphomethylpyrimidine kinase KM397_26970 PF07694 5TMR of 5TMR-LYT KM397_26970 PF00990 Diguanylate cyclase, GGDEF domain KM397_26975 PF04328 Selenoprotein, putative KM397_26980 PF13722 5TM C-terminal transporter carbon starvation CstA KM397_26980 PF02554 Carbon starvation protein CstA KM397_26985 PF00072 Response regulator receiver domain KM397_26985 PF04397 LytTr DNA-binding domain KM397_26990 PF07690 Major Facilitator Superfamily KM397_26995 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM397_27010 PF03458 UPF0126 domain KM397_27015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM397_27025 PF03061 Thioesterase superfamily KM397_27035 PF00535 Glycosyl transferase family 2 KM397_27040 PF00005 ABC transporter KM397_27040 PF12848 ABC transporter KM397_27060 PF00535 Glycosyl transferase family 2 KM397_27065 PF00440 Bacterial regulatory proteins, tetR family KM397_27070 PF00873 AcrB/AcrD/AcrF family KM397_27075 PF01625 Peptide methionine sulfoxide reductase KM397_27075 PF01641 SelR domain KM397_27080 PF01594 AI-2E family transporter KM397_27085 PF04172 LrgB-like family KM397_27090 PF03788 LrgA family KM397_27095 PF04397 LytTr DNA-binding domain KM397_27095 PF00072 Response regulator receiver domain KM397_27100 PF13492 GAF domain KM397_27100 PF06580 Histidine kinase KM397_27100 PF07694 5TMR of 5TMR-LYT KM397_27100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_27105 PF07690 Major Facilitator Superfamily KM397_27110 PF02028 BCCT, betaine/carnitine/choline family transporter KM397_27115 PF02898 Nitric oxide synthase, oxygenase domain KM397_27120 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM397_27120 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM397_27130 PF02293 AmiS/UreI family transporter KM397_27140 PF16363 GDP-mannose 4,6 dehydratase KM397_27145 PF03006 Haemolysin-III related KM397_27155 PF00271 Helicase conserved C-terminal domain KM397_27155 PF00270 DEAD/DEAH box helicase KM397_27155 PF03880 DbpA RNA binding domain KM397_27165 PF00478 IMP dehydrogenase / GMP reductase domain KM397_27170 PF08439 Oligopeptidase F KM397_27170 PF01432 Peptidase family M3 KM397_27180 PF02590 Predicted SPOUT methyltransferase KM397_27190 PF13180 PDZ domain KM397_27195 PF00753 Metallo-beta-lactamase superfamily KM397_27200 PF09648 YycH protein KM397_27205 PF07435 YycH protein KM397_27210 PF00672 HAMP domain KM397_27210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM397_27210 PF00512 His Kinase A (phospho-acceptor) domain KM397_27210 PF13426 PAS domain KM397_27215 PF00072 Response regulator receiver domain KM397_27215 PF00486 Transcriptional regulatory protein, C terminal KM397_27240 PF00709 Adenylosuccinate synthetase KM397_27245 PF03796 DnaB-like helicase C terminal domain KM397_27245 PF00772 DnaB-like helicase N terminal domain KM397_27250 PF01281 Ribosomal protein L9, N-terminal domain KM397_27250 PF03948 Ribosomal protein L9, C-terminal domain KM397_27255 PF02272 DHHA1 domain KM397_27255 PF01368 DHH family KM397_27260 PF09991 Predicted membrane protein (DUF2232) KM397_27265 PF01084 Ribosomal protein S18 KM397_27270 PF00436 Single-strand binding protein family KM397_27275 PF01250 Ribosomal protein S6 KM397_27280 PF01926 50S ribosome-binding GTPase KM397_27280 PF06071 Protein of unknown function (DUF933) KM397_27285 PF06107 Bacterial protein of unknown function (DUF951) KM397_27290 PF00924 Mechanosensitive ion channel KM397_27295 PF06866 Protein of unknown function (DUF1256) KM397_27300 PF02195 ParB-like nuclease domain KM397_27300 PF17762 HTH domain found in ParB protein KM397_27305 PF13614 AAA domain KM397_27310 PF17762 HTH domain found in ParB protein KM397_27310 PF02195 ParB-like nuclease domain KM397_27315 PF02527 rRNA small subunit methyltransferase G KM397_27320 PF13932 GidA associated domain KM397_27320 PF01134 Glucose inhibited division protein A KM397_27325 PF12631 MnmE helical domain KM397_27325 PF01926 50S ribosome-binding GTPase KM397_27325 PF10396 GTP-binding protein TrmE N-terminus KM397_27330 PF01424 R3H domain KM397_27330 PF14804 Jag N-terminus KM397_27335 PF02096 60Kd inner membrane protein KM397_27340 PF00825 Ribonuclease P KM397_27345 PF00468 Ribosomal protein L34 KM397_27355 PF08378 Nuclease-related domain KM397_27395 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM397_27475 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM397_27520 PF13427 Domain of unknown function (DUF4111) KM397_27520 PF18765 Polymerase beta, Nucleotidyltransferase KM397_27545 PF01609 Transposase DDE domain KM397_27550 PF01609 Transposase DDE domain KM397_27575 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KM397_27575 PF17854 FtsK alpha domain KM397_27575 PF09397 Ftsk gamma domain KM397_27575 PF01580 FtsK/SpoIIIE family KM397_27590 PF00091 Tubulin/FtsZ family, GTPase domain KM397_27665 PF00437 Type II/IV secretion system protein KM397_27785 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) KM397_27800 PF04235 Protein of unknown function (DUF418) KM397_27820 PF00395 S-layer homology domain KM397_27825 PF01569 PAP2 superfamily KM397_27840 PF00535 Glycosyl transferase family 2 KM397_27845 PF00483 Nucleotidyl transferase KM397_27850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM397_27850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM397_27850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM397_27890 PF03497 Anthrax toxin LF subunit KM397_27890 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM397_27910 PF00874 PRD domain KM397_27910 PF05043 Mga helix-turn-helix domain KM397_27910 PF08279 HTH domain KM397_27915 PF09385 Histidine kinase N terminal KM397_27930 PF13700 Domain of unknown function (DUF4158) KM397_27930 PF01526 Tn3 transposase DDE domain KM397_27935 PF02796 Helix-turn-helix domain of resolvase KM397_27935 PF00239 Resolvase, N terminal domain KM397_27940 PF03845 Spore germination protein KM397_27945 PF03323 Bacillus/Clostridium GerA spore germination protein KM397_27950 PF05504 Spore germination B3/ GerAC like, C-terminal KM397_27960 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 KM397_27960 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain KM397_27960 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 KM397_27960 PF07691 PA14 domain KM397_27965 PF01022 Bacterial regulatory protein, arsR family KM397_27990 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM397_27990 PF09156 Anthrax toxin lethal factor, middle domain KM397_28010 PF18277 AbrB C-terminal domain KM397_28010 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM397_28020 PF00589 Phage integrase family KM397_28020 PF02899 Phage integrase, N-terminal SAM-like domain KM397_28050 PF14436 Bacterial EndoU nuclease KM397_28050 PF04740 LXG domain of WXG superfamily KM397_28075 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM397_28085 PF00589 Phage integrase family KM397_28110 PF18801 response regulator aspartate phosphatase H, N terminal KM397_28120 PF17209 Hfq protein KM397_28125 PF01022 Bacterial regulatory protein, arsR family KM397_28130 PF02600 Disulfide bond formation protein DsbB KM397_28145 PF00565 Staphylococcal nuclease homologue KM397_28150 PF13342 C-terminal repeat of topoisomerase KM397_28150 PF01751 Toprim domain KM397_28150 PF01131 DNA topoisomerase KM397_28160 PF08708 Primase C terminal 1 (PriCT-1) KM397_28180 PF17362 Family of unknown function KM397_28195 PF17631 Family of unknown function (DUF5512) KM397_28235 PF00437 Type II/IV secretion system protein KM397_28265 PF04956 TrbC/VIRB2 family KM397_28280 PF12696 TraM recognition site of TraD and TraG KM397_28315 PF00877 NlpC/P60 family KM397_28325 PF17632 Family of unknown function (DUF5513) KM397_28350 PF17633 Family of unknown function (DUF5514) KM397_28355 PF17630 Family of unknown function (DUF5511) KM397_28360 PF18840 Large polyvalent protein associated domain 25 KM397_28375 PF13154 Protein of unknown function (DUF3991) KM397_28380 PF01131 DNA topoisomerase KM397_28380 PF01751 Toprim domain KM397_28420 PF17443 Uncharacterized protein pXO2-72 KM397_28440 PF00817 impB/mucB/samB family KM397_28440 PF11799 impB/mucB/samB family C-terminal domain KM397_28440 PF11798 IMS family HHH motif KM397_28445 PF13152 Protein of unknown function (DUF3967) KM397_28445 PF13411 MerR HTH family regulatory protein KM397_28450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM397_28480 PF00874 PRD domain KM397_28480 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM397_28480 PF05043 Mga helix-turn-helix domain KM397_28500 PF08279 HTH domain KM397_28500 PF05043 Mga helix-turn-helix domain KM397_28500 PF00874 PRD domain KM397_28505 PF09385 Histidine kinase N terminal KM397_28515 PF10502 Signal peptidase, peptidase S26 KM397_28530 PF01022 Bacterial regulatory protein, arsR family KM397_28540 PF08245 Mur ligase middle domain KM397_28545 PF14102 Capsule biosynthesis CapC KM397_28550 PF09587 Bacterial capsule synthesis protein PGA_cap KM397_28570 PF05043 Mga helix-turn-helix domain KM397_28570 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM397_28580 PF01569 PAP2 superfamily KM397_28590 PF00440 Bacterial regulatory proteins, tetR family KM397_28595 PF04463 Protein of unknown function (DUF523) KM397_28600 PF02517 CPBP intramembrane metalloprotease KM397_28605 PF01906 Putative heavy-metal-binding KM397_28620 PF00395 S-layer homology domain KM397_28620 PF01520 N-acetylmuramoyl-L-alanine amidase KM397_28635 PF13614 AAA domain