KD35_00100 SM00287 Bacterial SH3 domain homologues KD35_00130 SM00487 DEAD-like helicases superfamily KD35_00130 SM00490 helicase superfamily c-terminal domain KD35_00175 SM00382 ATPases associated with a variety of cellular activities KD35_00185 SM00530 Helix-turn-helix XRE-family like proteins KD35_00210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_00210 SM00387 Histidine kinase-like ATPases KD35_00210 SM00388 His Kinase A (phosphoacceptor) domain KD35_00215 SM00448 cheY-homologous receiver domain KD35_00215 SM00862 Transcriptional regulatory protein, C terminal KD35_00245 SM00287 Bacterial SH3 domain homologues KD35_00245 SM00382 ATPases associated with a variety of cellular activities KD35_00255 SM00984 UDP binding domain KD35_00325 SM00382 ATPases associated with a variety of cellular activities KD35_00330 SM00850 LytTr DNA-binding domain KD35_00415 SM00052 Putative diguanylate phosphodiesterase KD35_00415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KD35_00415 SM00091 PAS domain KD35_00415 SM00267 diguanylate cyclase KD35_00435 SM00382 ATPases associated with a variety of cellular activities KD35_00505 SM00226 Low molecular weight phosphatase family KD35_00520 SM00903 Flavin reductase like domain KD35_00555 SM00937 KD35_00555 KD35_00570 SM00357 Cold shock protein domain KD35_00570 SM00382 ATPases associated with a variety of cellular activities KD35_00570 SM00959 Rho termination factor, N-terminal domain KD35_00590 SM00448 cheY-homologous receiver domain KD35_00640 SM00155 Phospholipase D. Active site motifs. KD35_00650 SM00052 Putative diguanylate phosphodiesterase KD35_00650 SM00267 diguanylate cyclase KD35_00660 SM00530 Helix-turn-helix XRE-family like proteins KD35_00665 SM00421 helix_turn_helix, Lux Regulon KD35_00665 SM00448 cheY-homologous receiver domain KD35_00670 SM00387 Histidine kinase-like ATPases KD35_00680 SM00382 ATPases associated with a variety of cellular activities KD35_00730 SM00836 DALR anticodon binding domain KD35_00730 SM01016 Arginyl tRNA synthetase N terminal dom KD35_00775 SM00422 helix_turn_helix, mercury resistance KD35_00805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KD35_00815 SM00382 ATPases associated with a variety of cellular activities KD35_00865 SM00936 Penicillin-binding protein 5, C-terminal domain KD35_00910 SM00986 Uracil DNA glycosylase superfamily KD35_00910 SM00987 UreE urease accessory protein, C-terminal domain KD35_00920 SM00382 ATPases associated with a variety of cellular activities KD35_00930 SM00354 helix_turn _helix lactose operon repressor KD35_00965 SM00100 Cyclic nucleotide-monophosphate binding domain KD35_00975 SM00421 helix_turn_helix, Lux Regulon KD35_00975 SM00448 cheY-homologous receiver domain KD35_00990 SM00267 diguanylate cyclase KD35_01005 SM00448 cheY-homologous receiver domain KD35_01005 SM00850 LytTr DNA-binding domain KD35_01035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KD35_01060 SM00382 ATPases associated with a variety of cellular activities KD35_01120 SM00448 cheY-homologous receiver domain KD35_01120 SM00850 LytTr DNA-binding domain KD35_01125 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. KD35_01125 SM00387 Histidine kinase-like ATPases KD35_01180 SM00487 DEAD-like helicases superfamily KD35_01180 SM00490 helicase superfamily c-terminal domain KD35_01190 SM01240 KD35_01190 KD35_01215 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KD35_01220 SM00849 Metallo-beta-lactamase superfamily KD35_01235 SM00091 PAS domain KD35_01235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_01235 SM00387 Histidine kinase-like ATPases KD35_01235 SM00388 His Kinase A (phosphoacceptor) domain KD35_01240 SM00448 cheY-homologous receiver domain KD35_01240 SM00862 Transcriptional regulatory protein, C terminal KD35_01265 SM00788 Adenylosuccinate synthetase KD35_01280 SM00267 diguanylate cyclase KD35_01325 SM00470 ParB-like nuclease domain KD35_01335 SM00470 ParB-like nuclease domain KD35_01345 SM01228 KD35_01345 KD35_01355 SM00393 Putative single-stranded nucleic acids-binding domain KD35_01355 SM01245 KD35_01355 KD35_01375 SM00382 ATPases associated with a variety of cellular activities KD35_01375 SM00760 Bacterial dnaA protein helix-turn-helix domain KD35_01380 SM00480 DNA polymerase III beta subunit KD35_01395 SM00387 Histidine kinase-like ATPases KD35_01395 SM00433 TopoisomeraseII KD35_01400 SM00434 DNA Topoisomerase IV KD35_01435 SM00116 Domain in cystathionine beta-synthase and other proteins. KD35_01435 SM01240 KD35_01435 KD35_01440 SM00936 Penicillin-binding protein 5, C-terminal domain KD35_01495 SM00382 ATPases associated with a variety of cellular activities KD35_01505 SM00493 KD35_01505 KD35_01590 SM00966 SpoVT / AbrB like domain KD35_01605 SM00493 KD35_01605 KD35_01610 SM00650 Ribosomal RNA adenine dimethylases KD35_01655 SM01400 KD35_01655 KD35_01670 SM00487 DEAD-like helicases superfamily KD35_01670 SM00490 helicase superfamily c-terminal domain KD35_01670 SM00982 KD35_01670 KD35_01670 SM01058 CarD-like/TRCF domain KD35_01675 SM00966 SpoVT / AbrB like domain KD35_01690 SM00363 S4 RNA-binding domain KD35_01710 SM00316 Ribosomal protein S1-like RNA-binding domain KD35_01725 SM00331 Sigma factor PP2C-like phosphatases KD35_01725 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KD35_01730 SM00977 TilS substrate C-terminal domain KD35_01740 SM00382 ATPases associated with a variety of cellular activities KD35_01780 SM00905 Dihydroneopterin aldolase KD35_01790 SM00530 Helix-turn-helix XRE-family like proteins KD35_01835 SM00382 ATPases associated with a variety of cellular activities KD35_01835 SM01086 C-terminal, D2-small domain, of ClpB protein KD35_01840 SM00382 ATPases associated with a variety of cellular activities KD35_01850 SM00670 Large family of predicted nucleotide-binding domains KD35_01875 SM00840 KD35_01875 KD35_01880 SM00535 Ribonuclease III family KD35_01885 SM00967 RNA 2'-O ribose methyltransferase substrate binding KD35_01895 SM00421 helix_turn_helix, Lux Regulon KD35_01910 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. KD35_01915 SM00649 Ribosomal protein L11/L12 KD35_01945 SM00663 RNA polymerase I subunit A N-terminus KD35_01965 SM00838 Elongation factor G C-terminus KD35_01965 SM00889 Elongation factor G, domain IV KD35_01975 SM01403 KD35_01975 KD35_01995 SM01382 KD35_01995 KD35_01995 SM01383 KD35_01995 KD35_02010 SM00322 K homology RNA-binding domain KD35_02030 SM01374 KD35_02030 KD35_02035 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KD35_02095 SM00316 Ribosomal protein S1-like RNA-binding domain KD35_02115 SM00662 RNA polymerases D KD35_02125 SM00382 ATPases associated with a variety of cellular activities KD35_02130 SM00382 ATPases associated with a variety of cellular activities KD35_02160 SM00646 KD35_02160 KD35_02175 SM01251 KD35_02175 KD35_02295 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_02295 SM00895 KD35_02295 KD35_02310 SM01350 KD35_02310 KD35_02360 SM00382 ATPases associated with a variety of cellular activities KD35_02360 SM00930 KD35_02360 KD35_02370 SM00829 Enoylreductase KD35_02420 SM00382 ATPases associated with a variety of cellular activities KD35_02425 SM00382 ATPases associated with a variety of cellular activities KD35_02440 SM00342 helix_turn_helix, arabinose operon control protein KD35_02535 SM00563 Phosphate acyltransferases KD35_02545 SM00354 helix_turn _helix lactose operon repressor KD35_02600 SM00382 ATPases associated with a variety of cellular activities KD35_02630 SM00382 ATPases associated with a variety of cellular activities KD35_02635 SM00382 ATPases associated with a variety of cellular activities KD35_02710 SM00487 DEAD-like helicases superfamily KD35_02710 SM00490 helicase superfamily c-terminal domain KD35_02735 SM01005 Alanine racemase, C-terminal domain KD35_02750 SM00316 Ribosomal protein S1-like RNA-binding domain KD35_02750 SM00732 Likely ribonuclease with RNase H fold. KD35_02760 SM00731 SprT homologues. KD35_02865 SM00382 ATPases associated with a variety of cellular activities KD35_02870 SM00881 CoA binding domain KD35_02885 SM00883 Chaperonin 10 Kd subunit KD35_02905 SM00448 cheY-homologous receiver domain KD35_02905 SM00862 Transcriptional regulatory protein, C terminal KD35_02910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_02910 SM00387 Histidine kinase-like ATPases KD35_02910 SM00388 His Kinase A (phosphoacceptor) domain KD35_02990 SM00382 ATPases associated with a variety of cellular activities KD35_02995 SM00387 Histidine kinase-like ATPases KD35_02995 SM00388 His Kinase A (phosphoacceptor) domain KD35_03000 SM00448 cheY-homologous receiver domain KD35_03000 SM00862 Transcriptional regulatory protein, C terminal KD35_03020 SM01001 AIR carboxylase KD35_03030 SM00998 Adenylosuccinate lyase C-terminus KD35_03045 SM01211 KD35_03045 KD35_03070 SM00798 AICARFT/IMPCHase bienzyme KD35_03070 SM00851 MGS-like domain KD35_03075 SM01209 KD35_03075 KD35_03075 SM01210 KD35_03075 KD35_03085 SM00244 prohibitin homologues KD35_03105 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KD35_03105 SM00292 breast cancer carboxy-terminal domain KD35_03105 SM00532 Ligase N family KD35_03135 SM00382 ATPases associated with a variety of cellular activities KD35_03135 SM00930 KD35_03135 KD35_03165 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_03185 SM00845 GatB domain KD35_03190 SM00046 Diacylglycerol kinase catalytic domain (presumed) KD35_03205 SM00382 ATPases associated with a variety of cellular activities KD35_03270 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain KD35_03315 SM01007 Class II Aldolase and Adducin N-terminal domain KD35_03430 SM00062 Bacterial periplasmic substrate-binding proteins KD35_03430 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. KD35_03435 SM00382 ATPases associated with a variety of cellular activities KD35_03445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KD35_03445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_03450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KD35_03450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_03455 SM00642 Alpha-amylase domain KD35_03475 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KD35_03475 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KD35_03475 SM00493 KD35_03475 KD35_03495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KD35_03495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_03515 SM00382 ATPases associated with a variety of cellular activities KD35_03520 SM00382 ATPases associated with a variety of cellular activities KD35_03525 SM00060 Fibronectin type 3 domain KD35_03525 SM00636 KD35_03525 KD35_03525 SM00637 KD35_03525 KD35_03555 SM00530 Helix-turn-helix XRE-family like proteins KD35_03580 SM00946 Prolyl-tRNA synthetase, C-terminal KD35_03625 SM00831 Cation transporter/ATPase, N-terminus KD35_03635 SM00226 Low molecular weight phosphatase family KD35_03730 SM00478 endonuclease III KD35_03745 SM00530 Helix-turn-helix XRE-family like proteins KD35_03760 SM00530 Helix-turn-helix XRE-family like proteins KD35_03765 SM00530 Helix-turn-helix XRE-family like proteins KD35_03795 SM00382 ATPases associated with a variety of cellular activities KD35_04030 SM00382 ATPases associated with a variety of cellular activities KD35_04050 SM00530 Helix-turn-helix XRE-family like proteins KD35_04110 SM00984 UDP binding domain KD35_04195 SM00478 endonuclease III KD35_04195 SM00525 KD35_04195 KD35_04220 SM00382 ATPases associated with a variety of cellular activities KD35_04240 SM00382 ATPases associated with a variety of cellular activities KD35_04395 SM00567 E-Z type HEAT repeats KD35_04410 SM00052 Putative diguanylate phosphodiesterase KD35_04410 SM00091 PAS domain KD35_04410 SM00267 diguanylate cyclase KD35_04420 SM00763 PrkA AAA domain KD35_04435 SM00364 Leucine-rich repeats, bacterial type KD35_04435 SM00365 Leucine-rich repeat, SDS22-like subfamily KD35_04435 SM00369 Leucine-rich repeats, typical (most populated) subfamily KD35_04435 SM00725 NEAr Transporter domain KD35_04450 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins KD35_04460 SM00244 prohibitin homologues KD35_04465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KD35_04465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_04470 SM00091 PAS domain KD35_04470 SM00387 Histidine kinase-like ATPases KD35_04475 SM00448 cheY-homologous receiver domain KD35_04495 SM00248 ankyrin repeats KD35_04505 SM00382 ATPases associated with a variety of cellular activities KD35_04530 SM00448 cheY-homologous receiver domain KD35_04530 SM00862 Transcriptional regulatory protein, C terminal KD35_04535 SM00387 Histidine kinase-like ATPases KD35_04535 SM00388 His Kinase A (phosphoacceptor) domain KD35_04550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KD35_04550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_04555 SM00387 Histidine kinase-like ATPases KD35_04560 SM00448 cheY-homologous receiver domain KD35_04570 SM00919 Malic enzyme, NAD binding domain KD35_04570 SM01274 KD35_04570 KD35_04585 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_04595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_04595 SM00387 Histidine kinase-like ATPases KD35_04595 SM00388 His Kinase A (phosphoacceptor) domain KD35_04600 SM00448 cheY-homologous receiver domain KD35_04600 SM00862 Transcriptional regulatory protein, C terminal KD35_04620 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KD35_04620 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KD35_04635 SM01002 Alanine dehydrogenase/PNT, C-terminal domain KD35_04635 SM01003 Alanine dehydrogenase/PNT, N-terminal domain KD35_04645 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_04720 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_04750 SM00382 ATPases associated with a variety of cellular activities KD35_04775 SM00327 von Willebrand factor (vWF) type A domain KD35_04780 SM00382 ATPases associated with a variety of cellular activities KD35_04785 SM00155 Phospholipase D. Active site motifs. KD35_04800 SM00052 Putative diguanylate phosphodiesterase KD35_04800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KD35_04800 SM00091 PAS domain KD35_04800 SM00267 diguanylate cyclase KD35_04810 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_04810 SM00866 KD35_04810 KD35_04820 SM00642 Alpha-amylase domain KD35_04855 SM00382 ATPases associated with a variety of cellular activities KD35_04860 SM00062 Bacterial periplasmic substrate-binding proteins KD35_04860 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. KD35_04910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_04910 SM00387 Histidine kinase-like ATPases KD35_04910 SM00388 His Kinase A (phosphoacceptor) domain KD35_04915 SM00448 cheY-homologous receiver domain KD35_04915 SM00862 Transcriptional regulatory protein, C terminal KD35_04955 SM00382 ATPases associated with a variety of cellular activities KD35_04960 SM00382 ATPases associated with a variety of cellular activities KD35_04970 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_04985 SM00354 helix_turn _helix lactose operon repressor KD35_05000 SM00382 ATPases associated with a variety of cellular activities KD35_05035 SM00829 Enoylreductase KD35_05045 SM00770 Zinc dependent phospholipase C (alpha toxin) KD35_05080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KD35_05090 SM00530 Helix-turn-helix XRE-family like proteins KD35_05135 SM00530 Helix-turn-helix XRE-family like proteins KD35_05235 SM00899 KD35_05235 KD35_05380 SM00116 Domain in cystathionine beta-synthase and other proteins. KD35_05400 SM00287 Bacterial SH3 domain homologues KD35_05410 SM00382 ATPases associated with a variety of cellular activities KD35_05505 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_05555 SM00354 helix_turn _helix lactose operon repressor KD35_05625 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_05640 SM00450 Rhodanese Homology Domain KD35_05650 SM00450 Rhodanese Homology Domain KD35_05655 SM00450 Rhodanese Homology Domain KD35_05655 SM00849 Metallo-beta-lactamase superfamily KD35_05665 SM00450 Rhodanese Homology Domain KD35_05670 SM00450 Rhodanese Homology Domain KD35_05695 SM00829 Enoylreductase KD35_05745 SM00287 Bacterial SH3 domain homologues KD35_05755 SM00382 ATPases associated with a variety of cellular activities KD35_05810 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen KD35_05910 SM00344 helix_turn_helix ASNC type KD35_05975 SM01060 KD35_05975 KD35_06010 SM00382 ATPases associated with a variety of cellular activities KD35_06020 SM00062 Bacterial periplasmic substrate-binding proteins KD35_06020 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. KD35_06030 SM00382 ATPases associated with a variety of cellular activities KD35_06110 SM00729 Elongator protein 3, MiaB family, Radical SAM KD35_06145 SM00957 SecA DEAD-like domain KD35_06145 SM00958 SecA preprotein cross-linking domain KD35_06160 SM00635 Bacterial Ig-like domain 2 KD35_06220 SM00646 KD35_06220 KD35_06290 SM00382 ATPases associated with a variety of cellular activities KD35_06305 SM00860 SMI1 / KNR4 family KD35_06310 SM00860 SMI1 / KNR4 family KD35_06325 SM00091 PAS domain KD35_06325 SM00387 Histidine kinase-like ATPases KD35_06330 SM00448 cheY-homologous receiver domain KD35_06365 SM00422 helix_turn_helix, mercury resistance KD35_06490 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_06525 SM01120 KD35_06525 KD35_06560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KD35_06580 SM00460 Transglutaminase/protease-like homologues KD35_06645 SM00331 Sigma factor PP2C-like phosphatases KD35_06645 SM00448 cheY-homologous receiver domain KD35_06650 SM00138 Methyltransferase, chemotaxis proteins KD35_06655 SM00387 Histidine kinase-like ATPases KD35_06655 SM00388 His Kinase A (phosphoacceptor) domain KD35_06655 SM00448 cheY-homologous receiver domain KD35_06695 SM00829 Enoylreductase KD35_06735 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KD35_06760 SM00028 Tetratricopeptide repeats KD35_06780 SM00530 Helix-turn-helix XRE-family like proteins KD35_06830 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_06880 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_06895 SM00382 ATPases associated with a variety of cellular activities KD35_06965 SM00422 helix_turn_helix, mercury resistance KD35_07070 SM00354 helix_turn _helix lactose operon repressor KD35_07080 SM00849 Metallo-beta-lactamase superfamily KD35_07105 SM00725 NEAr Transporter domain KD35_07175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KD35_07190 SM00342 helix_turn_helix, arabinose operon control protein KD35_07190 SM00871 Bacterial transcription activator, effector binding domain KD35_07205 SM00387 Histidine kinase-like ATPases KD35_07205 SM00388 His Kinase A (phosphoacceptor) domain KD35_07210 SM00448 cheY-homologous receiver domain KD35_07210 SM00862 Transcriptional regulatory protein, C terminal KD35_07240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KD35_07240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_07280 SM00357 Cold shock protein domain KD35_07395 SM01060 KD35_07395 KD35_07410 SM00642 Alpha-amylase domain KD35_07415 SM00530 Helix-turn-helix XRE-family like proteins KD35_07425 SM00316 Ribosomal protein S1-like RNA-binding domain KD35_07475 SM00382 ATPases associated with a variety of cellular activities KD35_07475 SM01086 C-terminal, D2-small domain, of ClpB protein KD35_07505 SM00825 Beta-ketoacyl synthase KD35_07545 SM00382 ATPases associated with a variety of cellular activities KD35_07550 SM00382 ATPases associated with a variety of cellular activities KD35_07590 SM00155 Phospholipase D. Active site motifs. KD35_07620 SM01118 KD35_07620 KD35_07630 SM00954 Region found in RelA / SpoT proteins KD35_07785 SM00635 Bacterial Ig-like domain 2 KD35_07900 SM00861 Transketolase, pyrimidine binding domain KD35_07905 SM00530 Helix-turn-helix XRE-family like proteins KD35_07985 SM00530 Helix-turn-helix XRE-family like proteins KD35_08005 SM00382 ATPases associated with a variety of cellular activities KD35_08025 SM00014 Acid phosphatase homologues KD35_08075 SM00448 cheY-homologous receiver domain KD35_08075 SM00862 Transcriptional regulatory protein, C terminal KD35_08080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_08080 SM00387 Histidine kinase-like ATPases KD35_08080 SM00388 His Kinase A (phosphoacceptor) domain KD35_08085 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_08085 SM00895 KD35_08085 KD35_08155 SM00822 KD35_08155 KD35_08215 SM00420 helix_turn_helix, Deoxyribose operon repressor KD35_08215 SM01134 KD35_08215 KD35_08250 SM00387 Histidine kinase-like ATPases KD35_08250 SM00388 His Kinase A (phosphoacceptor) domain KD35_08255 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_08275 SM00387 Histidine kinase-like ATPases KD35_08275 SM00388 His Kinase A (phosphoacceptor) domain KD35_08345 SM00465 GIY-YIG type nucleases (URI domain) KD35_08345 SM00496 Intron-encoded nuclease repeat 2 KD35_08360 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_08365 SM00382 ATPases associated with a variety of cellular activities KD35_08375 SM00382 ATPases associated with a variety of cellular activities KD35_08395 SM00344 helix_turn_helix ASNC type KD35_08515 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_08590 SM00917 LeuA allosteric (dimerisation) domain KD35_08595 SM01329 KD35_08595 KD35_08780 SM00387 Histidine kinase-like ATPases KD35_08785 SM00421 helix_turn_helix, Lux Regulon KD35_08785 SM00448 cheY-homologous receiver domain KD35_08880 SM00091 PAS domain KD35_08880 SM00387 Histidine kinase-like ATPases KD35_08880 SM00388 His Kinase A (phosphoacceptor) domain KD35_08900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_08900 SM00387 Histidine kinase-like ATPases KD35_08900 SM00388 His Kinase A (phosphoacceptor) domain KD35_08955 SM00363 S4 RNA-binding domain KD35_08975 SM00448 cheY-homologous receiver domain KD35_08975 SM00862 Transcriptional regulatory protein, C terminal KD35_08980 SM00091 PAS domain KD35_08980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_08980 SM00387 Histidine kinase-like ATPases KD35_08980 SM00388 His Kinase A (phosphoacceptor) domain KD35_08990 SM00257 Lysin motif KD35_09015 SM00487 DEAD-like helicases superfamily KD35_09015 SM00490 helicase superfamily c-terminal domain KD35_09025 SM00257 Lysin motif KD35_09035 SM00422 helix_turn_helix, mercury resistance KD35_09045 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KD35_09060 SM00644 KD35_09060 KD35_09070 SM00870 KD35_09070 KD35_09085 SM00316 Ribosomal protein S1-like RNA-binding domain KD35_09090 SM01240 KD35_09090 KD35_09145 SM00411 bacterial (prokaryotic) histone like domain KD35_09170 SM00562 KD35_09170 KD35_09190 SM00028 Tetratricopeptide repeats KD35_09195 SM00914 KD35_09195 KD35_09240 SM00986 Uracil DNA glycosylase superfamily KD35_09240 SM00987 UreE urease accessory protein, C-terminal domain KD35_09260 SM00851 MGS-like domain KD35_09310 SM00479 KD35_09310 KD35_09310 SM00487 DEAD-like helicases superfamily KD35_09310 SM00491 KD35_09310 KD35_09335 SM00478 endonuclease III KD35_09335 SM00525 KD35_09335 KD35_09395 SM00981 KD35_09395 KD35_09405 SM00491 KD35_09405 KD35_09465 SM00450 Rhodanese Homology Domain KD35_09495 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs KD35_09495 SM00475 5'-3' exonuclease KD35_09605 SM00357 Cold shock protein domain KD35_09655 SM00849 Metallo-beta-lactamase superfamily KD35_09660 SM00422 helix_turn_helix, mercury resistance KD35_09660 SM00871 Bacterial transcription activator, effector binding domain KD35_09750 SM00448 cheY-homologous receiver domain KD35_09775 SM00138 Methyltransferase, chemotaxis proteins KD35_09860 SM00382 ATPases associated with a variety of cellular activities KD35_09900 SM00260 Two component signalling adaptor domain KD35_09900 SM00448 cheY-homologous receiver domain KD35_09925 SM00028 Tetratricopeptide repeats KD35_09945 SM00028 Tetratricopeptide repeats KD35_10020 SM00382 ATPases associated with a variety of cellular activities KD35_10020 SM00962 SRP54-type protein, GTPase domain KD35_10030 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KD35_10085 SM00530 Helix-turn-helix XRE-family like proteins KD35_10105 SM00382 ATPases associated with a variety of cellular activities KD35_10120 SM00849 Metallo-beta-lactamase superfamily KD35_10120 SM01027 Beta-Casp domain KD35_10140 SM00835 Cupin KD35_10155 SM00855 Phosphoglycerate mutase family KD35_10225 SM00421 helix_turn_helix, Lux Regulon KD35_10225 SM00448 cheY-homologous receiver domain KD35_10235 SM00382 ATPases associated with a variety of cellular activities KD35_10250 SM00155 Phospholipase D. Active site motifs. KD35_10270 SM00919 Malic enzyme, NAD binding domain KD35_10270 SM01274 KD35_10270 KD35_10275 SM00387 Histidine kinase-like ATPases KD35_10280 SM00448 cheY-homologous receiver domain KD35_10285 SM00487 DEAD-like helicases superfamily KD35_10285 SM00490 helicase superfamily c-terminal domain KD35_10350 SM00646 KD35_10350 KD35_10355 SM00047 Lysozyme subfamily 2 KD35_10530 SM00854 Bacterial capsule synthesis protein PGA_cap KD35_10560 SM00850 LytTr DNA-binding domain KD35_10615 SM00729 Elongator protein 3, MiaB family, Radical SAM KD35_10625 SM00448 cheY-homologous receiver domain KD35_10625 SM00862 Transcriptional regulatory protein, C terminal KD35_10645 SM00450 Rhodanese Homology Domain KD35_10695 SM01133 KD35_10695 KD35_10705 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain KD35_10740 SM01011 Aminopeptidase P, N-terminal domain KD35_10750 SM00287 Bacterial SH3 domain homologues KD35_10760 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KD35_10760 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KD35_10760 SM00493 KD35_10760 KD35_10855 SM00833 Cobalamin synthesis protein cobW C-terminal domain KD35_10890 SM00382 ATPases associated with a variety of cellular activities KD35_10895 SM00382 ATPases associated with a variety of cellular activities KD35_10930 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_10950 SM00382 ATPases associated with a variety of cellular activities KD35_10955 SM00382 ATPases associated with a variety of cellular activities KD35_10990 SM00287 Bacterial SH3 domain homologues KD35_11005 SM00382 ATPases associated with a variety of cellular activities KD35_11010 SM00448 cheY-homologous receiver domain KD35_11010 SM00862 Transcriptional regulatory protein, C terminal KD35_11015 SM00387 Histidine kinase-like ATPases KD35_11015 SM00388 His Kinase A (phosphoacceptor) domain KD35_11095 SM00448 cheY-homologous receiver domain KD35_11095 SM00862 Transcriptional regulatory protein, C terminal KD35_11100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_11100 SM00387 Histidine kinase-like ATPases KD35_11100 SM00388 His Kinase A (phosphoacceptor) domain KD35_11190 SM00460 Transglutaminase/protease-like homologues KD35_11215 SM00966 SpoVT / AbrB like domain KD35_11225 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_11260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KD35_11260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_11325 SM00833 Cobalamin synthesis protein cobW C-terminal domain KD35_11440 SM00855 Phosphoglycerate mutase family KD35_11490 SM00155 Phospholipase D. Active site motifs. KD35_11515 SM01091 Transporter associated domain KD35_11590 SM00244 prohibitin homologues KD35_11595 SM00855 Phosphoglycerate mutase family KD35_11610 SM01005 Alanine racemase, C-terminal domain KD35_11640 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_11755 SM00487 DEAD-like helicases superfamily KD35_11755 SM00490 helicase superfamily c-terminal domain KD35_11775 SM00829 Enoylreductase KD35_11795 SM00849 Metallo-beta-lactamase superfamily KD35_11810 SM00460 Transglutaminase/protease-like homologues KD35_11835 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KD35_11855 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_11860 SM00382 ATPases associated with a variety of cellular activities KD35_11870 SM00100 Cyclic nucleotide-monophosphate binding domain KD35_11870 SM00419 helix_turn_helix, cAMP Regulatory protein KD35_11875 SM00729 Elongator protein 3, MiaB family, Radical SAM KD35_11885 SM00852 Probable molybdopterin binding domain KD35_11950 SM00894 Excalibur calcium-binding domain KD35_12005 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KD35_12010 SM00382 ATPases associated with a variety of cellular activities KD35_12045 SM00567 E-Z type HEAT repeats KD35_12045 SM00932 Scaffold protein Nfu/NifU N terminal KD35_12065 SM00836 DALR anticodon binding domain KD35_12065 SM01016 Arginyl tRNA synthetase N terminal dom KD35_12115 SM00327 von Willebrand factor (vWF) type A domain KD35_12130 SM00382 ATPases associated with a variety of cellular activities KD35_12175 SM00857 Resolvase, N terminal domain KD35_12235 SM00448 cheY-homologous receiver domain KD35_12235 SM00862 Transcriptional regulatory protein, C terminal KD35_12240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_12240 SM00387 Histidine kinase-like ATPases KD35_12240 SM00388 His Kinase A (phosphoacceptor) domain KD35_12315 SM00382 ATPases associated with a variety of cellular activities KD35_12375 SM00563 Phosphate acyltransferases KD35_12485 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. KD35_12490 SM00421 helix_turn_helix, Lux Regulon KD35_12490 SM00448 cheY-homologous receiver domain KD35_12505 SM00829 Enoylreductase KD35_12570 SM00382 ATPases associated with a variety of cellular activities KD35_12610 SM01091 Transporter associated domain KD35_12625 SM00387 Histidine kinase-like ATPases KD35_12625 SM00388 His Kinase A (phosphoacceptor) domain KD35_12640 SM00882 Coenzyme A transferase KD35_12645 SM00882 Coenzyme A transferase KD35_12660 SM00382 ATPases associated with a variety of cellular activities KD35_12700 SM00219 Tyrosine kinase, catalytic domain KD35_12710 SM00014 Acid phosphatase homologues KD35_12730 SM00860 SMI1 / KNR4 family KD35_12755 SM00530 Helix-turn-helix XRE-family like proteins KD35_12820 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. KD35_12965 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_13005 SM00823 Phosphopantetheine attachment site KD35_13005 SM00824 Thioesterase KD35_13010 SM00923 MbtH-like protein KD35_13030 SM00411 bacterial (prokaryotic) histone like domain KD35_13075 SM00363 S4 RNA-binding domain KD35_13080 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KD35_13135 SM00849 Metallo-beta-lactamase superfamily KD35_13165 SM00849 Metallo-beta-lactamase superfamily KD35_13185 SM01059 Chloramphenicol acetyltransferase KD35_13210 SM00530 Helix-turn-helix XRE-family like proteins KD35_13250 SM00357 Cold shock protein domain KD35_13320 SM00859 Semialdehyde dehydrogenase, NAD binding domain KD35_13355 SM00382 ATPases associated with a variety of cellular activities KD35_13360 SM00382 ATPases associated with a variety of cellular activities KD35_13370 SM00646 KD35_13370 KD35_13380 SM00530 Helix-turn-helix XRE-family like proteins KD35_13395 SM00835 Cupin KD35_13465 SM01207 KD35_13465 KD35_13490 SM00849 Metallo-beta-lactamase superfamily KD35_13505 SM00487 DEAD-like helicases superfamily KD35_13505 SM00490 helicase superfamily c-terminal domain KD35_13535 SM00382 ATPases associated with a variety of cellular activities KD35_13560 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_13565 SM00855 Phosphoglycerate mutase family KD35_13640 SM00014 Acid phosphatase homologues KD35_13645 SM00354 helix_turn _helix lactose operon repressor KD35_13720 SM00530 Helix-turn-helix XRE-family like proteins KD35_13745 SM00646 KD35_13745 KD35_13760 SM00382 ATPases associated with a variety of cellular activities KD35_13770 SM00052 Putative diguanylate phosphodiesterase KD35_13770 SM00091 PAS domain KD35_13770 SM00267 diguanylate cyclase KD35_13780 SM00860 SMI1 / KNR4 family KD35_13790 SM00450 Rhodanese Homology Domain KD35_13790 SM00849 Metallo-beta-lactamase superfamily KD35_13805 SM00382 ATPases associated with a variety of cellular activities KD35_13835 SM00878 Biotin carboxylase C-terminal domain KD35_13895 SM00387 Histidine kinase-like ATPases KD35_13895 SM00388 His Kinase A (phosphoacceptor) domain KD35_13900 SM00448 cheY-homologous receiver domain KD35_13900 SM00862 Transcriptional regulatory protein, C terminal KD35_13955 SM00382 ATPases associated with a variety of cellular activities KD35_13975 SM00422 helix_turn_helix, mercury resistance KD35_13975 SM00871 Bacterial transcription activator, effector binding domain KD35_14005 SM00342 helix_turn_helix, arabinose operon control protein KD35_14020 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_14080 SM00448 cheY-homologous receiver domain KD35_14080 SM00862 Transcriptional regulatory protein, C terminal KD35_14095 SM00382 ATPases associated with a variety of cellular activities KD35_14110 SM00382 ATPases associated with a variety of cellular activities KD35_14140 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_14145 SM01209 KD35_14145 KD35_14270 SM00091 PAS domain KD35_14270 SM00387 Histidine kinase-like ATPases KD35_14270 SM00388 His Kinase A (phosphoacceptor) domain KD35_14295 SM00382 ATPases associated with a variety of cellular activities KD35_14305 SM00387 Histidine kinase-like ATPases KD35_14305 SM00388 His Kinase A (phosphoacceptor) domain KD35_14320 SM00829 Enoylreductase KD35_14325 SM00740 KD35_14325 KD35_14395 SM00422 helix_turn_helix, mercury resistance KD35_14490 SM00480 DNA polymerase III beta subunit KD35_14600 SM00465 GIY-YIG type nucleases (URI domain) KD35_14700 SM00642 Alpha-amylase domain KD35_14720 SM00871 Bacterial transcription activator, effector binding domain KD35_14740 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_14855 SM00382 ATPases associated with a variety of cellular activities KD35_14875 SM00420 helix_turn_helix, Deoxyribose operon repressor KD35_14875 SM01134 KD35_14875 KD35_14920 SM00861 Transketolase, pyrimidine binding domain KD35_14980 SM00116 Domain in cystathionine beta-synthase and other proteins. KD35_14980 SM00382 ATPases associated with a variety of cellular activities KD35_15015 SM00060 Fibronectin type 3 domain KD35_15015 SM00495 Chitin-binding domain type 3 KD35_15060 SM00849 Metallo-beta-lactamase superfamily KD35_15130 SM00341 Helicase and RNase D C-terminal KD35_15130 SM00487 DEAD-like helicases superfamily KD35_15130 SM00490 helicase superfamily c-terminal domain KD35_15130 SM00956 KD35_15130 KD35_15180 SM01131 KD35_15180 KD35_15210 SM01130 KD35_15210 KD35_15230 SM00091 PAS domain KD35_15230 SM00382 ATPases associated with a variety of cellular activities KD35_15300 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain KD35_15340 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KD35_15345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_15345 SM00387 Histidine kinase-like ATPases KD35_15345 SM00388 His Kinase A (phosphoacceptor) domain KD35_15350 SM00448 cheY-homologous receiver domain KD35_15350 SM00862 Transcriptional regulatory protein, C terminal KD35_15535 SM00382 ATPases associated with a variety of cellular activities KD35_15610 SM00062 Bacterial periplasmic substrate-binding proteins KD35_15615 SM00382 ATPases associated with a variety of cellular activities KD35_15645 SM00028 Tetratricopeptide repeats KD35_15735 SM00382 ATPases associated with a variety of cellular activities KD35_15790 SM00830 Chorismate mutase type II KD35_15825 SM00287 Bacterial SH3 domain homologues KD35_15875 SM00382 ATPases associated with a variety of cellular activities KD35_15895 SM01133 KD35_15895 KD35_15925 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_15945 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KD35_15960 SM00346 helix_turn_helix isocitrate lyase regulation KD35_15980 SM00098 Alkaline phosphatase homologues KD35_15990 SM00530 Helix-turn-helix XRE-family like proteins KD35_16015 SM00850 LytTr DNA-binding domain KD35_16115 SM01060 KD35_16115 KD35_16165 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_16170 SM00889 Elongation factor G, domain IV KD35_16195 SM00382 ATPases associated with a variety of cellular activities KD35_16200 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_16210 SM00382 ATPases associated with a variety of cellular activities KD35_16235 SM00342 helix_turn_helix, arabinose operon control protein KD35_16235 SM00871 Bacterial transcription activator, effector binding domain KD35_16260 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_16280 SM00387 Histidine kinase-like ATPases KD35_16280 SM00388 His Kinase A (phosphoacceptor) domain KD35_16285 SM00448 cheY-homologous receiver domain KD35_16285 SM00862 Transcriptional regulatory protein, C terminal KD35_16425 SM00796 Allophanate hydrolase subunit 1 KD35_16430 SM00346 helix_turn_helix isocitrate lyase regulation KD35_16450 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_16515 SM00849 Metallo-beta-lactamase superfamily KD35_16595 SM00870 KD35_16595 KD35_16600 SM00530 Helix-turn-helix XRE-family like proteins KD35_16635 SM00919 Malic enzyme, NAD binding domain KD35_16635 SM01274 KD35_16635 KD35_16665 SM00448 cheY-homologous receiver domain KD35_16710 SM01060 KD35_16710 KD35_16840 SM00382 ATPases associated with a variety of cellular activities KD35_16865 SM00226 Low molecular weight phosphatase family KD35_16880 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_16890 SM00028 Tetratricopeptide repeats KD35_16910 SM00344 helix_turn_helix ASNC type KD35_16945 SM00342 helix_turn_helix, arabinose operon control protein KD35_16980 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_17020 SM00448 cheY-homologous receiver domain KD35_17020 SM00862 Transcriptional regulatory protein, C terminal KD35_17025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_17025 SM00387 Histidine kinase-like ATPases KD35_17025 SM00388 His Kinase A (phosphoacceptor) domain KD35_17080 SM00530 Helix-turn-helix XRE-family like proteins KD35_17130 SM00382 ATPases associated with a variety of cellular activities KD35_17140 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_17155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_17155 SM00387 Histidine kinase-like ATPases KD35_17155 SM00388 His Kinase A (phosphoacceptor) domain KD35_17160 SM00448 cheY-homologous receiver domain KD35_17160 SM00862 Transcriptional regulatory protein, C terminal KD35_17170 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_17265 SM00354 helix_turn _helix lactose operon repressor KD35_17270 SM00028 Tetratricopeptide repeats KD35_17305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KD35_17305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_17305 SM00319 Homologues of the ligand binding domain of Tar KD35_17325 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins KD35_17350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_17395 SM00344 helix_turn_helix ASNC type KD35_17460 SM00342 helix_turn_helix, arabinose operon control protein KD35_17475 SM00287 Bacterial SH3 domain homologues KD35_17525 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_17550 SM00382 ATPases associated with a variety of cellular activities KD35_17560 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_17630 SM00382 ATPases associated with a variety of cellular activities KD35_17675 SM00530 Helix-turn-helix XRE-family like proteins KD35_17680 SM01207 KD35_17680 KD35_17740 SM00382 ATPases associated with a variety of cellular activities KD35_17755 SM00530 Helix-turn-helix XRE-family like proteins KD35_17815 SM01266 KD35_17815 KD35_17825 SM00382 ATPases associated with a variety of cellular activities KD35_17875 SM00028 Tetratricopeptide repeats KD35_17900 SM01091 Transporter associated domain KD35_17905 SM00422 helix_turn_helix, mercury resistance KD35_17945 SM01350 KD35_17945 KD35_17950 SM00861 Transketolase, pyrimidine binding domain KD35_17965 SM00829 Enoylreductase KD35_17980 SM00829 Enoylreductase KD35_18000 SM01276 KD35_18000 KD35_18045 SM00914 KD35_18045 KD35_18080 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_18080 SM00866 KD35_18080 KD35_18115 SM00849 Metallo-beta-lactamase superfamily KD35_18180 SM00248 ankyrin repeats KD35_18185 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_18225 SM00871 Bacterial transcription activator, effector binding domain KD35_18245 SM00382 ATPases associated with a variety of cellular activities KD35_18270 SM00849 Metallo-beta-lactamase superfamily KD35_18275 SM00641 Glycosyl hydrolases family 25 KD35_18340 SM00849 Metallo-beta-lactamase superfamily KD35_18345 SM00829 Enoylreductase KD35_18475 SM00829 Enoylreductase KD35_18480 SM00855 Phosphoglycerate mutase family KD35_18490 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KD35_18490 SM00534 ATPase domain of DNA mismatch repair MUTS family KD35_18500 SM00642 Alpha-amylase domain KD35_18570 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_18575 SM00829 Enoylreductase KD35_18660 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins KD35_18705 SM00479 KD35_18705 KD35_18710 SM00357 Cold shock protein domain KD35_18735 SM01022 KD35_18735 KD35_18845 SM00852 Probable molybdopterin binding domain KD35_18860 SM00729 Elongator protein 3, MiaB family, Radical SAM KD35_18880 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KD35_18880 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KD35_18990 SM00382 ATPases associated with a variety of cellular activities KD35_19005 SM00434 DNA Topoisomerase IV KD35_19010 SM00387 Histidine kinase-like ATPases KD35_19010 SM00433 TopoisomeraseII KD35_19020 SM00881 CoA binding domain KD35_19025 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KD35_19030 SM00448 cheY-homologous receiver domain KD35_19030 SM00862 Transcriptional regulatory protein, C terminal KD35_19045 SM01207 KD35_19045 KD35_19060 SM00257 Lysin motif KD35_19060 SM00636 KD35_19060 KD35_19080 SM00479 KD35_19080 KD35_19095 SM00382 ATPases associated with a variety of cellular activities KD35_19140 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KD35_19205 SM00644 KD35_19205 KD35_19205 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. KD35_19210 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KD35_19225 SM00091 PAS domain KD35_19225 SM00387 Histidine kinase-like ATPases KD35_19225 SM00388 His Kinase A (phosphoacceptor) domain KD35_19255 SM01058 CarD-like/TRCF domain KD35_19390 SM00644 KD35_19390 KD35_19405 SM00382 ATPases associated with a variety of cellular activities KD35_19410 SM00382 ATPases associated with a variety of cellular activities KD35_19425 SM00861 Transketolase, pyrimidine binding domain KD35_19450 SM00382 ATPases associated with a variety of cellular activities KD35_19455 SM00062 Bacterial periplasmic substrate-binding proteins KD35_19475 SM00857 Resolvase, N terminal domain KD35_19500 SM00028 Tetratricopeptide repeats KD35_19530 SM00287 Bacterial SH3 domain homologues KD35_19530 SM00644 KD35_19530 KD35_19685 SM00530 Helix-turn-helix XRE-family like proteins KD35_19765 SM00382 ATPases associated with a variety of cellular activities KD35_19815 SM00530 Helix-turn-helix XRE-family like proteins KD35_19820 SM00530 Helix-turn-helix XRE-family like proteins KD35_19845 SM01230 KD35_19845 KD35_19850 SM00422 helix_turn_helix, mercury resistance KD35_19870 SM00382 ATPases associated with a variety of cellular activities KD35_19900 SM00287 Bacterial SH3 domain homologues KD35_19915 SM00420 helix_turn_helix, Deoxyribose operon repressor KD35_19915 SM01134 KD35_19915 KD35_19945 SM00636 KD35_19945 KD35_19960 SM00411 bacterial (prokaryotic) histone like domain KD35_19990 SM00382 ATPases associated with a variety of cellular activities KD35_20020 SM00342 helix_turn_helix, arabinose operon control protein KD35_20030 SM00478 endonuclease III KD35_20065 SM00052 Putative diguanylate phosphodiesterase KD35_20065 SM00091 PAS domain KD35_20065 SM00267 diguanylate cyclase KD35_20095 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_20115 SM00148 Phospholipase C, catalytic domain (part); domain X KD35_20125 SM00257 Lysin motif KD35_20155 SM00387 Histidine kinase-like ATPases KD35_20155 SM00388 His Kinase A (phosphoacceptor) domain KD35_20160 SM00448 cheY-homologous receiver domain KD35_20160 SM00862 Transcriptional regulatory protein, C terminal KD35_20175 SM00382 ATPases associated with a variety of cellular activities KD35_20180 SM00853 MutL C terminal dimerisation domain KD35_20180 SM01340 KD35_20180 KD35_20185 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KD35_20185 SM00534 ATPase domain of DNA mismatch repair MUTS family KD35_20200 SM00729 Elongator protein 3, MiaB family, Radical SAM KD35_20230 SM00322 K homology RNA-binding domain KD35_20230 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KD35_20245 SM00852 Probable molybdopterin binding domain KD35_20300 SM00382 ATPases associated with a variety of cellular activities KD35_20310 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_20310 SM00866 KD35_20310 KD35_20315 SM00382 ATPases associated with a variety of cellular activities KD35_20315 SM00843 KD35_20315 KD35_20330 SM00849 Metallo-beta-lactamase superfamily KD35_20340 SM01130 KD35_20340 KD35_20350 SM00859 Semialdehyde dehydrogenase, NAD binding domain KD35_20380 SM00316 Ribosomal protein S1-like RNA-binding domain KD35_20380 SM00322 K homology RNA-binding domain KD35_20385 SM01387 KD35_20385 KD35_20390 SM00904 Riboflavin kinase KD35_20425 SM00316 Ribosomal protein S1-like RNA-binding domain KD35_20425 SM00322 K homology RNA-binding domain KD35_20435 SM00479 KD35_20435 KD35_20435 SM00481 DNA polymerase alpha chain like domain KD35_20445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KD35_20490 SM00382 ATPases associated with a variety of cellular activities KD35_20490 SM01086 C-terminal, D2-small domain, of ClpB protein KD35_20510 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KD35_20510 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KD35_20510 SM00493 KD35_20510 KD35_20520 SM00881 CoA binding domain KD35_20570 SM00382 ATPases associated with a variety of cellular activities KD35_20570 SM00962 SRP54-type protein, GTPase domain KD35_20570 SM00963 SRP54-type protein, helical bundle domain KD35_20580 SM00382 ATPases associated with a variety of cellular activities KD35_20580 SM00962 SRP54-type protein, GTPase domain KD35_20580 SM00963 SRP54-type protein, helical bundle domain KD35_20585 SM00968 SMC proteins Flexible Hinge Domain KD35_20590 SM00358 Double-stranded RNA binding motif KD35_20590 SM00535 Ribonuclease III family KD35_20600 SM00822 KD35_20600 KD35_20605 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KD35_20620 SM00487 DEAD-like helicases superfamily KD35_20620 SM00490 helicase superfamily c-terminal domain KD35_20625 SM01120 KD35_20625 KD35_20625 SM01121 KD35_20625 KD35_20645 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain KD35_20660 SM00220 Serine/Threonine protein kinases, catalytic domain KD35_20660 SM00740 KD35_20660 KD35_20665 SM00331 Sigma factor PP2C-like phosphatases KD35_20665 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KD35_20690 SM00487 DEAD-like helicases superfamily KD35_20690 SM00490 helicase superfamily c-terminal domain KD35_20700 SM01409 KD35_20700 KD35_20705 SM00072 Guanylate kinase homologues. KD35_20720 SM00831 Cation transporter/ATPase, N-terminus KD35_20765 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family KD35_20780 SM00851 MGS-like domain KD35_20780 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KD35_20780 SM01209 KD35_20780 KD35_20785 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain KD35_20810 SM00363 S4 RNA-binding domain KD35_20835 SM00363 S4 RNA-binding domain KD35_20880 SM00864 Tubulin/FtsZ family, GTPase domain KD35_20880 SM00865 Tubulin/FtsZ family, C-terminal domain KD35_20885 SM00842 Cell division protein FtsA KD35_20925 SM00740 KD35_20925 KD35_20930 SM00740 KD35_20930 KD35_20960 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains KD35_21000 SM00530 Helix-turn-helix XRE-family like proteins KD35_21015 SM00644 KD35_21015 KD35_21125 SM00507 HNH nucleases KD35_21170 SM00530 Helix-turn-helix XRE-family like proteins KD35_21245 SM00382 ATPases associated with a variety of cellular activities KD35_21270 SM00530 Helix-turn-helix XRE-family like proteins KD35_21275 SM00530 Helix-turn-helix XRE-family like proteins KD35_21285 SM00530 Helix-turn-helix XRE-family like proteins KD35_21310 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KD35_21350 SM00855 Phosphoglycerate mutase family KD35_21415 SM00878 Biotin carboxylase C-terminal domain KD35_21435 SM00670 Large family of predicted nucleotide-binding domains KD35_21460 SM00838 Elongation factor G C-terminus KD35_21540 SM00861 Transketolase, pyrimidine binding domain KD35_21570 SM00849 Metallo-beta-lactamase superfamily KD35_21635 SM00052 Putative diguanylate phosphodiesterase KD35_21680 SM00267 diguanylate cyclase KD35_21730 SM00387 Histidine kinase-like ATPases KD35_21730 SM00388 His Kinase A (phosphoacceptor) domain KD35_21745 SM00354 helix_turn _helix lactose operon repressor KD35_21765 SM00642 Alpha-amylase domain KD35_21770 SM00642 Alpha-amylase domain KD35_21775 SM00382 ATPases associated with a variety of cellular activities KD35_21810 SM00382 ATPases associated with a variety of cellular activities KD35_21900 SM01007 Class II Aldolase and Adducin N-terminal domain KD35_21925 SM00267 diguanylate cyclase KD35_21960 SM01061 CAT RNA binding domain KD35_21970 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_21970 SM00866 KD35_21970 KD35_21985 SM00849 Metallo-beta-lactamase superfamily KD35_22090 SM00387 Histidine kinase-like ATPases KD35_22100 SM00936 Penicillin-binding protein 5, C-terminal domain KD35_22105 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_22110 SM00382 ATPases associated with a variety of cellular activities KD35_22130 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_22150 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain KD35_22245 SM00354 helix_turn _helix lactose operon repressor KD35_22265 SM00704 CDGSH-type zinc finger. Function unknown. KD35_22295 SM00729 Elongator protein 3, MiaB family, Radical SAM KD35_22295 SM00876 Biotin and Thiamin Synthesis associated domain KD35_22345 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_22380 SM00859 Semialdehyde dehydrogenase, NAD binding domain KD35_22425 SM00849 Metallo-beta-lactamase superfamily KD35_22475 SM00382 ATPases associated with a variety of cellular activities KD35_22485 SM00062 Bacterial periplasmic substrate-binding proteins KD35_22485 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. KD35_22525 SM00861 Transketolase, pyrimidine binding domain KD35_22545 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KD35_22560 SM00091 PAS domain KD35_22560 SM00382 ATPases associated with a variety of cellular activities KD35_22585 SM00448 cheY-homologous receiver domain KD35_22590 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KD35_22605 SM00363 S4 RNA-binding domain KD35_22610 SM00861 Transketolase, pyrimidine binding domain KD35_22645 SM00878 Biotin carboxylase C-terminal domain KD35_22695 SM00382 ATPases associated with a variety of cellular activities KD35_22715 SM00841 Elongation factor P, C-terminal KD35_22715 SM01185 KD35_22715 KD35_22750 SM00529 Helix-turn-helix diphteria tox regulatory element KD35_22770 SM00450 Rhodanese Homology Domain KD35_22775 SM00354 helix_turn _helix lactose operon repressor KD35_22830 SM00382 ATPases associated with a variety of cellular activities KD35_22835 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_22865 SM00487 DEAD-like helicases superfamily KD35_22865 SM00490 helicase superfamily c-terminal domain KD35_22900 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. KD35_22935 SM00382 ATPases associated with a variety of cellular activities KD35_22990 SM01018 B12 binding domain KD35_23025 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_23035 SM00849 Metallo-beta-lactamase superfamily KD35_23075 SM00382 ATPases associated with a variety of cellular activities KD35_23140 SM00382 ATPases associated with a variety of cellular activities KD35_23155 SM00518 AP endonuclease family 2 KD35_23160 SM00487 DEAD-like helicases superfamily KD35_23160 SM00490 helicase superfamily c-terminal domain KD35_23195 SM00400 zinc finger KD35_23195 SM00493 KD35_23195 KD35_23195 SM00766 DNA primase DnaG DnaB-binding KD35_23215 SM00116 Domain in cystathionine beta-synthase and other proteins. KD35_23250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KD35_23285 SM00729 Elongator protein 3, MiaB family, Radical SAM KD35_23300 SM00271 DnaJ molecular chaperone homology domain KD35_23320 SM00729 Elongator protein 3, MiaB family, Radical SAM KD35_23330 SM00838 Elongation factor G C-terminus KD35_23360 SM00849 Metallo-beta-lactamase superfamily KD35_23370 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KD35_23390 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KD35_23400 SM01103 KD35_23400 KD35_23455 SM00954 Region found in RelA / SpoT proteins KD35_23465 SM00098 Alkaline phosphatase homologues KD35_23490 SM00855 Phosphoglycerate mutase family KD35_23540 SM00530 Helix-turn-helix XRE-family like proteins KD35_23565 SM00382 ATPases associated with a variety of cellular activities KD35_23660 SM00732 Likely ribonuclease with RNase H fold. KD35_23670 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KD35_23705 SM00028 Tetratricopeptide repeats KD35_23725 SM00382 ATPases associated with a variety of cellular activities KD35_23760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KD35_23760 SM00954 Region found in RelA / SpoT proteins KD35_23805 SM01323 KD35_23805 KD35_23825 SM00382 ATPases associated with a variety of cellular activities KD35_23830 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KD35_23855 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_23870 SM00257 Lysin motif KD35_23920 SM00382 ATPases associated with a variety of cellular activities KD35_23925 SM00387 Histidine kinase-like ATPases KD35_23935 SM00448 cheY-homologous receiver domain KD35_23935 SM00862 Transcriptional regulatory protein, C terminal KD35_23945 SM01317 KD35_23945 KD35_24035 SM00257 Lysin motif KD35_24045 SM01004 Delta-aminolevulinic acid dehydratase KD35_24070 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_24085 SM00382 ATPases associated with a variety of cellular activities KD35_24085 SM00464 Found in ATP-dependent protease La (LON) KD35_24090 SM00382 ATPases associated with a variety of cellular activities KD35_24095 SM00382 ATPases associated with a variety of cellular activities KD35_24095 SM00994 ClpX C4-type zinc finger KD35_24095 SM01086 C-terminal, D2-small domain, of ClpB protein KD35_24155 SM00909 Sporulation and spore germination KD35_24190 SM00421 helix_turn_helix, Lux Regulon KD35_24230 SM00382 ATPases associated with a variety of cellular activities KD35_24235 SM00382 ATPases associated with a variety of cellular activities KD35_24245 SM00342 helix_turn_helix, arabinose operon control protein KD35_24245 SM00448 cheY-homologous receiver domain KD35_24265 SM00530 Helix-turn-helix XRE-family like proteins KD35_24290 SM00382 ATPases associated with a variety of cellular activities KD35_24340 SM00465 GIY-YIG type nucleases (URI domain) KD35_24350 SM00893 Electron transfer flavoprotein domain KD35_24355 SM00893 Electron transfer flavoprotein domain KD35_24420 SM00382 ATPases associated with a variety of cellular activities KD35_24425 SM00387 Histidine kinase-like ATPases KD35_24425 SM00388 His Kinase A (phosphoacceptor) domain KD35_24430 SM00448 cheY-homologous receiver domain KD35_24430 SM00862 Transcriptional regulatory protein, C terminal KD35_24445 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KD35_24465 SM00382 ATPases associated with a variety of cellular activities KD35_24480 SM00725 NEAr Transporter domain KD35_24485 SM00725 NEAr Transporter domain KD35_24490 SM00725 NEAr Transporter domain KD35_24500 SM00363 S4 RNA-binding domain KD35_24510 SM00463 Small MutS-related domain KD35_24510 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KD35_24510 SM00534 ATPase domain of DNA mismatch repair MUTS family KD35_24515 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KD35_24515 SM00481 DNA polymerase alpha chain like domain KD35_24515 SM00483 DNA polymerase X family KD35_24555 SM00873 B3/4 domain KD35_24555 SM00874 tRNA synthetase B5 domain KD35_24555 SM00896 Ferredoxin-fold anticodon binding domain KD35_24565 SM00967 RNA 2'-O ribose methyltransferase substrate binding KD35_24640 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KD35_24650 SM00382 ATPases associated with a variety of cellular activities KD35_24670 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KD35_24685 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain KD35_24685 SM01232 KD35_24685 KD35_24690 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs KD35_24690 SM00474 3'-5' exonuclease KD35_24690 SM00475 5'-3' exonuclease KD35_24690 SM00482 DNA polymerase A domain KD35_24695 SM00091 PAS domain KD35_24695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_24695 SM00387 Histidine kinase-like ATPases KD35_24695 SM00388 His Kinase A (phosphoacceptor) domain KD35_24700 SM00448 cheY-homologous receiver domain KD35_24700 SM00862 Transcriptional regulatory protein, C terminal KD35_24720 SM01329 KD35_24720 KD35_24770 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_24775 SM00919 Malic enzyme, NAD binding domain KD35_24775 SM01274 KD35_24775 KD35_24780 SM00481 DNA polymerase alpha chain like domain KD35_24815 SM00116 Domain in cystathionine beta-synthase and other proteins. KD35_24825 SM00849 Metallo-beta-lactamase superfamily KD35_24880 SM00530 Helix-turn-helix XRE-family like proteins KD35_24890 SM01002 Alanine dehydrogenase/PNT, C-terminal domain KD35_24890 SM01003 Alanine dehydrogenase/PNT, N-terminal domain KD35_25010 SM00981 KD35_25010 KD35_25050 SM00363 S4 RNA-binding domain KD35_25050 SM01390 KD35_25050 KD35_25065 SM00363 S4 RNA-binding domain KD35_25095 SM00116 Domain in cystathionine beta-synthase and other proteins. KD35_25110 SM00448 cheY-homologous receiver domain KD35_25110 SM00862 Transcriptional regulatory protein, C terminal KD35_25115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_25115 SM00387 Histidine kinase-like ATPases KD35_25115 SM00388 His Kinase A (phosphoacceptor) domain KD35_25120 SM00248 ankyrin repeats KD35_25155 SM00354 helix_turn _helix lactose operon repressor KD35_25215 SM00843 KD35_25215 KD35_25255 SM00849 Metallo-beta-lactamase superfamily KD35_25275 SM00642 Alpha-amylase domain KD35_25300 SM00420 helix_turn_helix, Deoxyribose operon repressor KD35_25305 SM00363 S4 RNA-binding domain KD35_25325 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_25350 SM01058 CarD-like/TRCF domain KD35_25385 SM00852 Probable molybdopterin binding domain KD35_25420 SM00450 Rhodanese Homology Domain KD35_25500 SM00382 ATPases associated with a variety of cellular activities KD35_25520 SM00729 Elongator protein 3, MiaB family, Radical SAM KD35_25530 SM00382 ATPases associated with a variety of cellular activities KD35_25570 SM00014 Acid phosphatase homologues KD35_25585 SM00852 Probable molybdopterin binding domain KD35_25645 SM00387 Histidine kinase-like ATPases KD35_25650 SM00387 Histidine kinase-like ATPases KD35_25650 SM00388 His Kinase A (phosphoacceptor) domain KD35_25680 SM00382 ATPases associated with a variety of cellular activities KD35_25735 SM01234 KD35_25735 KD35_25740 SM00947 Carbonic anhydrase KD35_25760 SM00894 Excalibur calcium-binding domain KD35_25820 SM00899 KD35_25820 KD35_25830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_25830 SM00387 Histidine kinase-like ATPases KD35_25830 SM00388 His Kinase A (phosphoacceptor) domain KD35_25835 SM00448 cheY-homologous receiver domain KD35_25835 SM00862 Transcriptional regulatory protein, C terminal KD35_25865 SM00046 Diacylglycerol kinase catalytic domain (presumed) KD35_25915 SM00382 ATPases associated with a variety of cellular activities KD35_25920 SM00342 helix_turn_helix, arabinose operon control protein KD35_25920 SM00871 Bacterial transcription activator, effector binding domain KD35_25925 SM00448 cheY-homologous receiver domain KD35_25925 SM00862 Transcriptional regulatory protein, C terminal KD35_25955 SM00382 ATPases associated with a variety of cellular activities KD35_25975 SM00345 helix_turn_helix gluconate operon transcriptional repressor KD35_25975 SM00866 KD35_25975 KD35_26015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_26015 SM00387 Histidine kinase-like ATPases KD35_26015 SM00388 His Kinase A (phosphoacceptor) domain KD35_26020 SM00448 cheY-homologous receiver domain KD35_26020 SM00862 Transcriptional regulatory protein, C terminal KD35_26025 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain KD35_26065 SM00357 Cold shock protein domain KD35_26105 SM00642 Alpha-amylase domain KD35_26270 SM00316 Ribosomal protein S1-like RNA-binding domain KD35_26280 SM00344 helix_turn_helix ASNC type KD35_26315 SM01298 KD35_26315 KD35_26320 SM00479 KD35_26320 KD35_26415 SM00871 Bacterial transcription activator, effector binding domain KD35_26475 SM00382 ATPases associated with a variety of cellular activities KD35_26500 SM00860 SMI1 / KNR4 family KD35_26570 SM00420 helix_turn_helix, Deoxyribose operon repressor KD35_26610 SM00422 helix_turn_helix, mercury resistance KD35_26625 SM00855 Phosphoglycerate mutase family KD35_26635 SM00729 Elongator protein 3, MiaB family, Radical SAM KD35_26700 SM00382 ATPases associated with a variety of cellular activities KD35_26720 SM00382 ATPases associated with a variety of cellular activities KD35_26720 SM00930 KD35_26720 KD35_26740 SM00493 KD35_26740 KD35_26830 SM00849 Metallo-beta-lactamase superfamily KD35_26880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KD35_26880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_26950 SM00530 Helix-turn-helix XRE-family like proteins KD35_26975 SM00448 cheY-homologous receiver domain KD35_26975 SM00862 Transcriptional regulatory protein, C terminal KD35_26980 SM00387 Histidine kinase-like ATPases KD35_26980 SM00388 His Kinase A (phosphoacceptor) domain KD35_27000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KD35_27000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KD35_27020 SM00347 helix_turn_helix multiple antibiotic resistance protein KD35_27150 SM00363 S4 RNA-binding domain KD35_27160 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain KD35_27165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KD35_27215 SM00382 ATPases associated with a variety of cellular activities KD35_27235 SM00448 cheY-homologous receiver domain KD35_27235 SM00862 Transcriptional regulatory protein, C terminal KD35_27245 SM00316 Ribosomal protein S1-like RNA-binding domain KD35_27245 SM00357 Cold shock protein domain KD35_27245 SM00955 KD35_27245 KD35_27355 SM00507 HNH nucleases KD35_27390 SM01192 KD35_27390 KD35_27390 SM01193 KD35_27390 KD35_27410 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KD35_27510 SM00028 Tetratricopeptide repeats KD35_27550 SM00487 DEAD-like helicases superfamily KD35_27550 SM00490 helicase superfamily c-terminal domain KD35_27570 SM00422 helix_turn_helix, mercury resistance KD35_27590 SM00530 Helix-turn-helix XRE-family like proteins KD35_27605 SM00422 helix_turn_helix, mercury resistance KD35_27625 SM00382 ATPases associated with a variety of cellular activities KD35_27635 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KD35_27635 SM00245 tail specific protease KD35_27645 SM00382 ATPases associated with a variety of cellular activities KD35_27660 SM00937 KD35_27660 KD35_27665 SM00957 SecA DEAD-like domain KD35_27665 SM00958 SecA preprotein cross-linking domain KD35_27675 SM00357 Cold shock protein domain KD35_27685 SM00487 DEAD-like helicases superfamily KD35_27685 SM00490 helicase superfamily c-terminal domain KD35_27725 SM00984 UDP binding domain KD35_27740 SM00382 ATPases associated with a variety of cellular activities KD35_27745 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. KD35_27880 SM00507 HNH nucleases KD35_27885 SM00487 DEAD-like helicases superfamily KD35_27955 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain KD35_28065 SM00530 Helix-turn-helix XRE-family like proteins KD35_28080 SM00843 KD35_28080 KD35_28095 SM00864 Tubulin/FtsZ family, GTPase domain KD35_28335 SM00014 Acid phosphatase homologues KD35_28365 SM00984 UDP binding domain KD35_28465 SM00857 Resolvase, N terminal domain KD35_28490 SM00758 KD35_28490 KD35_28495 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_28580 SM00860 SMI1 / KNR4 family KD35_28610 SM00954 Region found in RelA / SpoT proteins KD35_28640 SM00028 Tetratricopeptide repeats KD35_28650 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_28670 SM00318 Staphylococcal nuclease homologues KD35_28680 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KD35_28680 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KD35_28680 SM00493 KD35_28680 KD35_28885 SM00646 KD35_28885 KD35_28955 SM00854 Bacterial capsule synthesis protein PGA_cap KD35_28970 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KD35_29130 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KD35_29135 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KD35_29135 SM00493 KD35_29135