locus-tag class description KM394_00005 PF00308 Bacterial dnaA protein KM394_00005 PF08299 Bacterial dnaA protein helix-turn-helix KM394_00005 PF11638 DnaA N-terminal domain KM394_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KM394_00010 PF02767 DNA polymerase III beta subunit, central domain KM394_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KM394_00020 PF02463 RecF/RecN/SMC N terminal domain KM394_00025 PF01751 Toprim domain KM394_00025 PF00204 DNA gyrase B KM394_00025 PF00986 DNA gyrase B subunit, carboxyl terminus KM394_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller KM394_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A KM394_00060 PF14175 YaaC-like Protein KM394_00065 PF00478 IMP dehydrogenase / GMP reductase domain KM394_00065 PF00571 CBS domain KM394_00070 PF00768 D-alanyl-D-alanine carboxypeptidase KM394_00070 PF07943 Penicillin-binding protein 5, C-terminal domain KM394_00075 PF01680 SOR/SNZ family KM394_00080 PF01174 SNO glutamine amidotransferase family KM394_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM394_00085 PF02403 Seryl-tRNA synthetase N-terminal domain KM394_00100 PF01712 Deoxynucleoside kinase KM394_00105 PF01712 Deoxynucleoside kinase KM394_00110 PF00857 Isochorismatase family KM394_00115 PF14437 MafB19-like deaminase KM394_00125 PF12169 DNA polymerase III subunits gamma and tau domain III KM394_00130 PF02575 YbaB/EbfC DNA-binding family KM394_00135 PF13662 Toprim domain KM394_00135 PF02132 RecR protein KM394_00140 PF10704 Protein of unknown function (DUF2508) KM394_00145 PF07441 SigmaK-factor processing regulatory protein BofA KM394_00180 PF01276 Orn/Lys/Arg decarboxylase, major domain KM394_00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM394_00185 PF02223 Thymidylate kinase KM394_00190 PF09115 DNA polymerase III, delta subunit, C terminal KM394_00195 PF04468 PSP1 C-terminal conserved region KM394_00200 PF06156 Initiation control protein YabA KM394_00205 PF05175 Methyltransferase small domain KM394_00210 PF01541 GIY-YIG catalytic domain KM394_00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM394_00220 PF18277 AbrB C-terminal domain KM394_00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM394_00225 PF08264 Anticodon-binding domain of tRNA KM394_00225 PF09334 tRNA synthetases class I (M) KM394_00225 PF01588 Putative tRNA binding domain KM394_00230 PF01026 TatD related DNase KM394_00235 PF13331 Domain of unknown function (DUF4093) KM394_00235 PF13662 Toprim domain KM394_00240 PF00398 Ribosomal RNA adenine dimethylase KM394_00245 PF05582 YabG peptidase U57 KM394_00250 PF06257 Biofilm formation stimulator VEG KM394_00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM394_00260 PF00288 GHMP kinases N terminal domain KM394_00260 PF08544 GHMP kinases C terminal KM394_00265 PF09182 Bacterial purine repressor, N-terminal KM394_00265 PF00156 Phosphoribosyl transferase domain KM394_00270 PF01042 Endoribonuclease L-PSP KM394_00275 PF04026 SpoVG KM394_00280 PF00483 Nucleotidyl transferase KM394_00280 PF00132 Bacterial transferase hexapeptide (six repeats) KM394_00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KM394_00285 PF14572 Phosphoribosyl synthetase-associated domain KM394_00290 PF01195 Peptidyl-tRNA hydrolase KM394_00300 PF02559 CarD-like/TRCF domain KM394_00300 PF00270 DEAD/DEAH box helicase KM394_00300 PF03461 TRCF domain KM394_00300 PF17757 UvrB interaction domain KM394_00300 PF00271 Helicase conserved C-terminal domain KM394_00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM394_00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor KM394_00310 PF01943 Polysaccharide biosynthesis protein KM394_00310 PF14667 Polysaccharide biosynthesis C-terminal domain KM394_00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM394_00315 PF03819 MazG nucleotide pyrophosphohydrolase domain KM394_00320 PF01479 S4 domain KM394_00325 PF07873 YabP family KM394_00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) KM394_00340 PF00575 S1 RNA binding domain KM394_00355 PF07228 Stage II sporulation protein E (SpoIIE) KM394_00360 PF09179 TilS substrate binding domain KM394_00360 PF01171 PP-loop family KM394_00360 PF11734 TilS substrate C-terminal domain KM394_00365 PF00156 Phosphoribosyl transferase domain KM394_00370 PF17862 AAA+ lid domain KM394_00370 PF00004 ATPase family associated with various cellular activities (AAA) KM394_00370 PF01434 Peptidase family M41 KM394_00370 PF06480 FtsH Extracellular KM394_00375 PF03309 Type III pantothenate kinase KM394_00380 PF01430 Hsp33 protein KM394_00385 PF00291 Pyridoxal-phosphate dependent enzyme KM394_00390 PF04715 Anthranilate synthase component I, N terminal region KM394_00390 PF00425 chorismate binding enzyme KM394_00395 PF00117 Glutamine amidotransferase class-I KM394_00400 PF01063 Amino-transferase class IV KM394_00405 PF00809 Pterin binding enzyme KM394_00410 PF02152 Dihydroneopterin aldolase KM394_00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KM394_00420 PF01381 Helix-turn-helix KM394_00425 PF01207 Dihydrouridine synthase (Dus) KM394_00430 PF01336 OB-fold nucleic acid binding domain KM394_00430 PF00152 tRNA synthetases class II (D, K and N) KM394_00450 PF17727 CtsR C-terminal dimerization domain KM394_00450 PF05848 CtsR N-terminal HTH domain KM394_00455 PF02151 UvrB/uvrC motif KM394_00460 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KM394_00465 PF00004 ATPase family associated with various cellular activities (AAA) KM394_00465 PF17871 AAA lid domain KM394_00465 PF07724 AAA domain (Cdc48 subfamily) KM394_00465 PF02861 Clp amino terminal domain, pathogenicity island component KM394_00465 PF10431 C-terminal, D2-small domain, of ClpB protein KM394_00470 PF18073 Rubredoxin metal binding domain KM394_00475 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM394_00475 PF10635 DisA bacterial checkpoint controller linker region KM394_00485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KM394_00490 PF02542 YgbB family KM394_00495 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM394_00500 PF06426 Serine acetyltransferase, N-terminal KM394_00500 PF00132 Bacterial transferase hexapeptide (six repeats) KM394_00505 PF01406 tRNA synthetases class I (C) catalytic domain KM394_00505 PF09190 DALR domain KM394_00510 PF00636 Ribonuclease III domain KM394_00515 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM394_00515 PF00588 SpoU rRNA Methylase family KM394_00520 PF05991 YacP-like NYN domain KM394_00525 PF08281 Sigma-70, region 4 KM394_00525 PF04542 Sigma-70 region 2 KM394_00530 PF00471 Ribosomal protein L33 KM394_00535 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KM394_00540 PF00467 KOW motif KM394_00540 PF02357 Transcription termination factor nusG KM394_00545 PF03946 Ribosomal protein L11, N-terminal domain KM394_00545 PF00298 Ribosomal protein L11, RNA binding domain KM394_00550 PF00687 Ribosomal protein L1p/L10e family KM394_00555 PF00466 Ribosomal protein L10 KM394_00560 PF00542 Ribosomal protein L7/L12 C-terminal domain KM394_00560 PF16320 Ribosomal protein L7/L12 dimerisation domain KM394_00565 PF05175 Methyltransferase small domain KM394_00570 PF04563 RNA polymerase beta subunit KM394_00570 PF04565 RNA polymerase Rpb2, domain 3 KM394_00570 PF10385 RNA polymerase beta subunit external 1 domain KM394_00570 PF00562 RNA polymerase Rpb2, domain 6 KM394_00570 PF04560 RNA polymerase Rpb2, domain 7 KM394_00570 PF04561 RNA polymerase Rpb2, domain 2 KM394_00575 PF04997 RNA polymerase Rpb1, domain 1 KM394_00575 PF04998 RNA polymerase Rpb1, domain 5 KM394_00575 PF05000 RNA polymerase Rpb1, domain 4 KM394_00575 PF04983 RNA polymerase Rpb1, domain 3 KM394_00575 PF00623 RNA polymerase Rpb1, domain 2 KM394_00580 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM394_00585 PF00164 Ribosomal protein S12/S23 KM394_00590 PF00177 Ribosomal protein S7p/S5e KM394_00595 PF03764 Elongation factor G, domain IV KM394_00595 PF14492 Elongation Factor G, domain II KM394_00595 PF00679 Elongation factor G C-terminus KM394_00595 PF00009 Elongation factor Tu GTP binding domain KM394_00595 PF03144 Elongation factor Tu domain 2 KM394_00600 PF03143 Elongation factor Tu C-terminal domain KM394_00600 PF03144 Elongation factor Tu domain 2 KM394_00600 PF00009 Elongation factor Tu GTP binding domain KM394_00605 PF00338 Ribosomal protein S10p/S20e KM394_00610 PF00297 Ribosomal protein L3 KM394_00615 PF00573 Ribosomal protein L4/L1 family KM394_00620 PF00276 Ribosomal protein L23 KM394_00625 PF03947 Ribosomal Proteins L2, C-terminal domain KM394_00625 PF00181 Ribosomal Proteins L2, RNA binding domain KM394_00630 PF00203 Ribosomal protein S19 KM394_00635 PF00237 Ribosomal protein L22p/L17e KM394_00640 PF00189 Ribosomal protein S3, C-terminal domain KM394_00640 PF07650 KH domain KM394_00645 PF00252 Ribosomal protein L16p/L10e KM394_00650 PF00831 Ribosomal L29 protein KM394_00655 PF00366 Ribosomal protein S17 KM394_00660 PF00238 Ribosomal protein L14p/L23e KM394_00665 PF00467 KOW motif KM394_00665 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KM394_00670 PF00281 Ribosomal protein L5 KM394_00670 PF00673 ribosomal L5P family C-terminus KM394_00675 PF00253 Ribosomal protein S14p/S29e KM394_00680 PF00410 Ribosomal protein S8 KM394_00685 PF00347 Ribosomal protein L6 KM394_00690 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KM394_00695 PF03719 Ribosomal protein S5, C-terminal domain KM394_00695 PF00333 Ribosomal protein S5, N-terminal domain KM394_00700 PF00327 Ribosomal protein L30p/L7e KM394_00705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KM394_00710 PF00344 SecY translocase KM394_00715 PF05191 Adenylate kinase, active site lid KM394_00720 PF00557 Metallopeptidase family M24 KM394_00725 PF01176 Translation initiation factor 1A / IF-1 KM394_00730 PF00444 Ribosomal protein L36 KM394_00735 PF00416 Ribosomal protein S13/S18 KM394_00740 PF00411 Ribosomal protein S11 KM394_00745 PF01000 RNA polymerase Rpb3/RpoA insert domain KM394_00745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KM394_00745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KM394_00750 PF01196 Ribosomal protein L17 KM394_00755 PF00005 ABC transporter KM394_00760 PF00005 ABC transporter KM394_00765 PF02361 Cobalt transport protein KM394_00770 PF01416 tRNA pseudouridine synthase KM394_00775 PF00572 Ribosomal protein L13 KM394_00780 PF00380 Ribosomal protein S9/S16 KM394_00790 PF01520 N-acetylmuramoyl-L-alanine amidase KM394_00795 PF10609 NUBPL iron-transfer P-loop NTPase KM394_00800 PF17898 Spore germination GerD central core domain KM394_00805 PF14089 KinB-signalling pathway activation in sporulation KM394_00810 PF01522 Polysaccharide deacetylase KM394_00885 PF00491 Arginase family KM394_00890 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM394_00895 PF07949 YbbR-like protein KM394_00900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM394_00900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM394_00900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM394_00900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM394_00910 PF01380 SIS domain KM394_00915 PF00561 alpha/beta hydrolase fold KM394_00920 PF00392 Bacterial regulatory proteins, gntR family KM394_00920 PF07729 FCD domain KM394_00930 PF02447 GntP family permease KM394_00935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM394_00935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM394_00940 PF00326 Prolyl oligopeptidase family KM394_00940 PF07676 WD40-like Beta Propeller Repeat KM394_00975 PF00528 Binding-protein-dependent transport system inner membrane component KM394_00980 PF09383 NIL domain KM394_00980 PF00005 ABC transporter KM394_00985 PF03180 NLPA lipoprotein KM394_00990 PF00107 Zinc-binding dehydrogenase KM394_00990 PF08240 Alcohol dehydrogenase GroES-like domain KM394_01000 PF01565 FAD binding domain KM394_01005 PF07690 Major Facilitator Superfamily KM394_01015 PF07690 Major Facilitator Superfamily KM394_01030 PF00528 Binding-protein-dependent transport system inner membrane component KM394_01035 PF12911 N-terminal TM domain of oligopeptide transport permease C KM394_01035 PF00528 Binding-protein-dependent transport system inner membrane component KM394_01040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM394_01040 PF00005 ABC transporter KM394_01045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM394_01045 PF00005 ABC transporter KM394_01050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_01060 PF12833 Helix-turn-helix domain KM394_01075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_01080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_01085 PF00248 Aldo/keto reductase family KM394_01090 PF03807 NADP oxidoreductase coenzyme F420-dependent KM394_01090 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM394_01095 PF04973 Nicotinamide mononucleotide transporter KM394_01100 PF06800 Sugar transport protein KM394_01105 PF00528 Binding-protein-dependent transport system inner membrane component KM394_01115 PF12728 Helix-turn-helix domain KM394_01115 PF12727 PBP superfamily domain KM394_01125 PF03466 LysR substrate binding domain KM394_01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM394_01130 PF00892 EamA-like transporter family KM394_01135 PF14142 YrzO-like protein KM394_01145 PF01553 Acyltransferase KM394_01155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM394_01155 PF00356 Bacterial regulatory proteins, lacI family KM394_01165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM394_01165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM394_01175 PF01026 TatD related DNase KM394_01180 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KM394_01205 PF12848 ABC transporter KM394_01205 PF16326 ABC transporter C-terminal domain KM394_01205 PF00005 ABC transporter KM394_01220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_01225 PF00528 Binding-protein-dependent transport system inner membrane component KM394_01230 PF12911 N-terminal TM domain of oligopeptide transport permease C KM394_01230 PF00528 Binding-protein-dependent transport system inner membrane component KM394_01235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM394_01235 PF00005 ABC transporter KM394_01240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM394_01240 PF00005 ABC transporter KM394_01275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM394_01280 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM394_01290 PF07690 Major Facilitator Superfamily KM394_01300 PF02875 Mur ligase family, glutamate ligase domain KM394_01300 PF08245 Mur ligase middle domain KM394_01300 PF01225 Mur ligase family, catalytic domain KM394_01305 PF00271 Helicase conserved C-terminal domain KM394_01305 PF00270 DEAD/DEAH box helicase KM394_01310 PF03851 UV-endonuclease UvdE KM394_01315 PF01694 Rhomboid family KM394_01320 PF01648 4'-phosphopantetheinyl transferase superfamily KM394_01330 PF00842 Alanine racemase, C-terminal domain KM394_01330 PF01168 Alanine racemase, N-terminal domain KM394_01335 PF01402 Ribbon-helix-helix protein, copG family KM394_01340 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KM394_01345 PF17674 HHH domain KM394_01345 PF00575 S1 RNA binding domain KM394_01345 PF09371 Tex-like protein N-terminal domain KM394_01345 PF16921 Tex protein YqgF-like domain KM394_01355 PF10263 SprT-like family KM394_01355 PF17283 SprT-like zinc ribbon domain KM394_01440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KM394_01445 PF00814 Glycoprotease family KM394_01450 PF00583 Acetyltransferase (GNAT) family KM394_01455 PF00814 Glycoprotease family KM394_01460 PF12848 ABC transporter KM394_01460 PF00005 ABC transporter KM394_01460 PF16326 ABC transporter C-terminal domain KM394_01465 PF06971 Putative DNA-binding protein N-terminus KM394_01465 PF02629 CoA binding domain KM394_01475 PF02517 CPBP intramembrane metalloprotease KM394_01480 PF00166 Chaperonin 10 Kd subunit KM394_01485 PF00118 TCP-1/cpn60 chaperonin family KM394_01490 PF00958 GMP synthase C terminal domain KM394_01490 PF02540 NAD synthase KM394_01490 PF00117 Glutamine amidotransferase class-I KM394_01495 PF00860 Permease family KM394_01500 PF00072 Response regulator receiver domain KM394_01500 PF00486 Transcriptional regulatory protein, C terminal KM394_01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_01505 PF00512 His Kinase A (phospho-acceptor) domain KM394_01505 PF00989 PAS fold KM394_01505 PF16736 Single Cache-like KM394_01535 PF08241 Methyltransferase domain KM394_01545 PF16363 GDP-mannose 4,6 dehydratase KM394_01575 PF02673 Bacitracin resistance protein BacA KM394_01585 PF00005 ABC transporter KM394_01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_01590 PF00512 His Kinase A (phospho-acceptor) domain KM394_01595 PF00072 Response regulator receiver domain KM394_01595 PF00486 Transcriptional regulatory protein, C terminal KM394_01615 PF00731 AIR carboxylase KM394_01620 PF02222 ATP-grasp domain KM394_01620 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KM394_01625 PF00206 Lyase KM394_01625 PF10397 Adenylosuccinate lyase C-terminus KM394_01630 PF01259 SAICAR synthetase KM394_01635 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KM394_01645 PF00586 AIR synthase related protein, N-terminal domain KM394_01645 PF02769 AIR synthase related protein, C-terminal domain KM394_01645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KM394_01650 PF00156 Phosphoribosyl transferase domain KM394_01655 PF00586 AIR synthase related protein, N-terminal domain KM394_01655 PF02769 AIR synthase related protein, C-terminal domain KM394_01660 PF00551 Formyl transferase KM394_01665 PF02142 MGS-like domain KM394_01665 PF01808 AICARFT/IMPCHase bienzyme KM394_01670 PF02844 Phosphoribosylglycinamide synthetase, N domain KM394_01670 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KM394_01670 PF02843 Phosphoribosylglycinamide synthetase, C domain KM394_01690 PF01884 PcrB family KM394_01695 PF00580 UvrD/REP helicase N-terminal domain KM394_01695 PF13361 UvrD-like helicase C-terminal domain KM394_01700 PF00533 BRCA1 C Terminus (BRCT) domain KM394_01700 PF01653 NAD-dependent DNA ligase adenylation domain KM394_01700 PF03120 NAD-dependent DNA ligase OB-fold domain KM394_01700 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KM394_01700 PF12826 Helix-hairpin-helix motif KM394_01705 PF07537 CamS sex pheromone cAM373 precursor KM394_01710 PF01925 Sulfite exporter TauE/SafE KM394_01715 PF00171 Aldehyde dehydrogenase family KM394_01725 PF00857 Isochorismatase family KM394_01730 PF09383 NIL domain KM394_01730 PF00005 ABC transporter KM394_01735 PF00528 Binding-protein-dependent transport system inner membrane component KM394_01740 PF03180 NLPA lipoprotein KM394_01760 PF01047 MarR family KM394_01770 PF02686 Glu-tRNAGln amidotransferase C subunit KM394_01775 PF01425 Amidase KM394_01780 PF02934 GatB/GatE catalytic domain KM394_01780 PF02637 GatB domain KM394_01785 PF00781 Diacylglycerol kinase catalytic domain KM394_01790 PF13419 Haloacid dehalogenase-like hydrolase KM394_01795 PF00202 Aminotransferase class-III KM394_01800 PF00158 Sigma-54 interaction domain KM394_01805 PF00171 Aldehyde dehydrogenase family KM394_01810 PF00893 Small Multidrug Resistance protein KM394_01815 PF02073 Thermophilic metalloprotease (M29) KM394_01830 PF01773 Na+ dependent nucleoside transporter N-terminus KM394_01830 PF07662 Na+ dependent nucleoside transporter C-terminus KM394_01830 PF07670 Nucleoside recognition KM394_01835 PF05958 tRNA (Uracil-5-)-methyltransferase KM394_01835 PF01938 TRAM domain KM394_01835 PF02475 Met-10+ like-protein KM394_01840 PF01207 Dihydrouridine synthase (Dus) KM394_01850 PF07308 Protein of unknown function (DUF1456) KM394_01865 PF13378 Enolase C-terminal domain-like KM394_01865 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM394_01875 PF03553 Na+/H+ antiporter family KM394_01880 PF01546 Peptidase family M20/M25/M40 KM394_01880 PF07687 Peptidase dimerisation domain KM394_01890 PF13192 Thioredoxin domain KM394_01890 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_01895 PF00578 AhpC/TSA family KM394_01900 PF01636 Phosphotransferase enzyme family KM394_01905 PF01008 Initiation factor 2 subunit family KM394_01910 PF00596 Class II Aldolase and Adducin N-terminal domain KM394_01915 PF01032 FecCD transport family KM394_01920 PF01032 FecCD transport family KM394_01925 PF01497 Periplasmic binding protein KM394_01930 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_01940 PF12728 Helix-turn-helix domain KM394_01975 PF13188 PAS domain KM394_01975 PF13426 PAS domain KM394_01975 PF00512 His Kinase A (phospho-acceptor) domain KM394_01975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_01975 PF00989 PAS fold KM394_01995 PF10127 RNA repair pathway DNA polymerase beta family KM394_02000 PF07690 Major Facilitator Superfamily KM394_02005 PF01266 FAD dependent oxidoreductase KM394_02005 PF00355 Rieske [2Fe-2S] domain KM394_02015 PF00528 Binding-protein-dependent transport system inner membrane component KM394_02020 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM394_02025 PF00005 ABC transporter KM394_02030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM394_02030 PF00672 HAMP domain KM394_02030 PF12729 Four helix bundle sensory module for signal transduction KM394_02035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM394_02035 PF00672 HAMP domain KM394_02035 PF12729 Four helix bundle sensory module for signal transduction KM394_02040 PF16657 Maltogenic Amylase, C-terminal domain KM394_02040 PF00128 Alpha amylase, catalytic domain KM394_02045 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM394_02045 PF00367 phosphotransferase system, EIIB KM394_02045 PF02378 Phosphotransferase system, EIIC KM394_02050 PF03372 Endonuclease/Exonuclease/phosphatase family KM394_02055 PF01061 ABC-2 type transporter KM394_02060 PF01131 DNA topoisomerase KM394_02060 PF01751 Toprim domain KM394_02065 PF02110 Hydroxyethylthiazole kinase family KM394_02070 PF02581 Thiamine monophosphate synthase KM394_02075 PF03605 Anaerobic c4-dicarboxylate membrane transporter KM394_02080 PF00672 HAMP domain KM394_02080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM394_02085 PF01910 Thiamine-binding protein KM394_02090 PF00528 Binding-protein-dependent transport system inner membrane component KM394_02100 PF00005 ABC transporter KM394_02105 PF00005 ABC transporter KM394_02105 PF12848 ABC transporter KM394_02110 PF00704 Glycosyl hydrolases family 18 KM394_02110 PF00041 Fibronectin type III domain KM394_02130 PF00440 Bacterial regulatory proteins, tetR family KM394_02130 PF08360 QacR-like protein, C-terminal region KM394_02150 PF11700 Vacuole effluxer Atg22 like KM394_02165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM394_02165 PF09180 Prolyl-tRNA synthetase, C-terminal KM394_02165 PF03129 Anticodon binding domain KM394_02175 PF00480 ROK family KM394_02180 PF02342 TerD domain KM394_02185 PF02342 TerD domain KM394_02190 PF02342 TerD domain KM394_02195 PF03741 Integral membrane protein TerC family KM394_02200 PF14266 Putative component of 'biosynthetic module' KM394_02205 PF05816 Toxic anion resistance protein (TelA) KM394_02210 PF00689 Cation transporting ATPase, C-terminus KM394_02210 PF00690 Cation transporter/ATPase, N-terminus KM394_02215 PF06569 Protein of unknown function (DUF1128) KM394_02220 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM394_02230 PF03631 Virulence factor BrkB KM394_02240 PF00892 EamA-like transporter family KM394_02260 PF09335 SNARE associated Golgi protein KM394_02275 PF16242 Pyridoxamine 5'-phosphate oxidase like KM394_02280 PF01699 Sodium/calcium exchanger protein KM394_02285 PF14167 YfkD-like protein KM394_02290 PF04055 Radical SAM superfamily KM394_02290 PF08756 YfkB-like domain KM394_02300 PF05681 Fumarate hydratase (Fumerase) KM394_02300 PF05683 Fumarase C-terminus KM394_02305 PF01522 Polysaccharide deacetylase KM394_02315 PF00730 HhH-GPD superfamily base excision DNA repair protein KM394_02320 PF05958 tRNA (Uracil-5-)-methyltransferase KM394_02320 PF01938 TRAM domain KM394_02325 PF14659 Phage integrase, N-terminal SAM-like domain KM394_02325 PF00589 Phage integrase family KM394_02335 PF01381 Helix-turn-helix KM394_02350 PF01381 Helix-turn-helix KM394_02385 PF07319 Primosomal protein DnaI N-terminus KM394_02385 PF01695 IstB-like ATP binding protein KM394_02605 PF01183 Glycosyl hydrolases family 25 KM394_02615 PF01416 tRNA pseudouridine synthase KM394_02625 PF02954 Bacterial regulatory protein, Fis family KM394_02625 PF13426 PAS domain KM394_02625 PF00158 Sigma-54 interaction domain KM394_02635 PF00324 Amino acid permease KM394_02640 PF07687 Peptidase dimerisation domain KM394_02640 PF01546 Peptidase family M20/M25/M40 KM394_02665 PF04960 Glutaminase KM394_02670 PF02378 Phosphotransferase system, EIIC KM394_02670 PF00367 phosphotransferase system, EIIB KM394_02675 PF00144 Beta-lactamase KM394_02690 PF00535 Glycosyl transferase family 2 KM394_02695 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM394_02695 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM394_02695 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM394_02700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM394_02700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM394_02700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM394_02705 PF01370 NAD dependent epimerase/dehydratase family KM394_02705 PF00551 Formyl transferase KM394_02705 PF02911 Formyl transferase, C-terminal domain KM394_02710 PF00535 Glycosyl transferase family 2 KM394_02720 PF02901 Pyruvate formate lyase-like KM394_02720 PF01228 Glycine radical KM394_02725 PF04055 Radical SAM superfamily KM394_02730 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KM394_02730 PF04101 Glycosyltransferase family 28 C-terminal domain KM394_02745 PF01979 Amidohydrolase family KM394_02750 PF01370 NAD dependent epimerase/dehydratase family KM394_02750 PF08338 Domain of unknown function (DUF1731) KM394_02755 PF02631 RecX family KM394_02770 PF08176 Small acid-soluble spore protein K family KM394_02775 PF14043 WVELL protein KM394_02780 PF04307 LexA-binding, inner membrane-associated putative hydrolase KM394_02785 PF00730 HhH-GPD superfamily base excision DNA repair protein KM394_02785 PF14815 NUDIX domain KM394_02795 PF04259 Small, acid-soluble spore protein, gamma-type KM394_02800 PF14182 YgaB-like protein KM394_02805 PF04167 Protein of unknown function (DUF402) KM394_02810 PF00664 ABC transporter transmembrane region KM394_02810 PF00005 ABC transporter KM394_02815 PF06081 Aromatic acid exporter family member 1 KM394_02820 PF00310 Glutamine amidotransferases class-II KM394_02820 PF04898 Glutamate synthase central domain KM394_02820 PF01645 Conserved region in glutamate synthase KM394_02820 PF01493 GXGXG motif KM394_02825 PF00202 Aminotransferase class-III KM394_02830 PF00005 ABC transporter KM394_02845 PF07885 Ion channel KM394_02850 PF00578 AhpC/TSA family KM394_02855 PF01475 Ferric uptake regulator family KM394_02860 PF11023 Zinc-ribbon containing domain KM394_02960 PF01709 Transcriptional regulator KM394_02965 PF13344 Haloacid dehalogenase-like hydrolase KM394_02965 PF00293 NUDIX domain KM394_02970 PF00912 Transglycosylase KM394_02970 PF00905 Penicillin binding protein transpeptidase domain KM394_02975 PF13462 Thioredoxin KM394_02985 PF08331 Domain of unknown function (DUF1730) KM394_02990 PF12671 Putative amidase domain KM394_02995 PF00588 SpoU rRNA Methylase family KM394_03000 PF03707 Bacterial signalling protein N terminal repeat KM394_03000 PF00563 EAL domain KM394_03000 PF00990 Diguanylate cyclase, GGDEF domain KM394_03005 PF06798 PrkA serine protein kinase C-terminal domain KM394_03005 PF08298 PrkA AAA domain KM394_03010 PF04285 Protein of unknown function (DUF444) KM394_03025 PF02028 BCCT, betaine/carnitine/choline family transporter KM394_03030 PF08453 Peptidase family M9 N-terminal KM394_03030 PF01752 Collagenase KM394_03030 PF18496 Collagenase G catalytic helper subdomain KM394_03040 PF15975 Flotillin KM394_03040 PF01145 SPFH domain / Band 7 family KM394_03045 PF02743 Cache domain KM394_03045 PF00672 HAMP domain KM394_03045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM394_03050 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM394_03050 PF00989 PAS fold KM394_03050 PF17203 Single cache domain 3 KM394_03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_03055 PF00072 Response regulator receiver domain KM394_03055 PF08279 HTH domain KM394_03055 PF12431 Transcriptional regulator KM394_03060 PF03600 Citrate transporter KM394_03080 PF04309 Glycerol-3-phosphate responsive antiterminator KM394_03085 PF00005 ABC transporter KM394_03085 PF17912 MalK OB fold domain KM394_03090 PF00528 Binding-protein-dependent transport system inner membrane component KM394_03095 PF00528 Binding-protein-dependent transport system inner membrane component KM394_03100 PF13416 Bacterial extracellular solute-binding protein KM394_03105 PF00149 Calcineurin-like phosphoesterase KM394_03110 PF00072 Response regulator receiver domain KM394_03110 PF00486 Transcriptional regulatory protein, C terminal KM394_03115 PF00512 His Kinase A (phospho-acceptor) domain KM394_03115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_03125 PF13529 Peptidase_C39 like family KM394_03130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM394_03130 PF00672 HAMP domain KM394_03130 PF02743 Cache domain KM394_03135 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM394_03135 PF17203 Single cache domain 3 KM394_03135 PF00989 PAS fold KM394_03135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_03140 PF00072 Response regulator receiver domain KM394_03145 PF03390 2-hydroxycarboxylate transporter family KM394_03150 PF00390 Malic enzyme, N-terminal domain KM394_03150 PF03949 Malic enzyme, NAD binding domain KM394_03160 PF00892 EamA-like transporter family KM394_03165 PF00392 Bacterial regulatory proteins, gntR family KM394_03165 PF00155 Aminotransferase class I and II KM394_03175 PF00512 His Kinase A (phospho-acceptor) domain KM394_03175 PF18698 Histidine kinase sensor domain KM394_03175 PF00672 HAMP domain KM394_03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_03175 PF00989 PAS fold KM394_03180 PF00486 Transcriptional regulatory protein, C terminal KM394_03180 PF00072 Response regulator receiver domain KM394_03185 PF00583 Acetyltransferase (GNAT) family KM394_03185 PF13508 Acetyltransferase (GNAT) domain KM394_03190 PF02634 FdhD/NarQ family KM394_03195 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM394_03195 PF00384 Molybdopterin oxidoreductase KM394_03195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM394_03195 PF01568 Molydopterin dinucleotide binding domain KM394_03195 PF00037 4Fe-4S binding domain KM394_03200 PF07849 Protein of unknown function (DUF1641) KM394_03210 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM394_03210 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM394_03215 PF13520 Amino acid permease KM394_03220 PF01022 Bacterial regulatory protein, arsR family KM394_03225 PF00403 Heavy-metal-associated domain KM394_03230 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KM394_03230 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KM394_03230 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KM394_03245 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM394_03245 PF01447 Thermolysin metallopeptidase, catalytic domain KM394_03245 PF07504 Fungalysin/Thermolysin Propeptide Motif KM394_03245 PF03413 Peptidase propeptide and YPEB domain KM394_03265 PF04294 VanW like protein KM394_03270 PF03816 Cell envelope-related transcriptional attenuator domain KM394_03275 PF01773 Na+ dependent nucleoside transporter N-terminus KM394_03275 PF07662 Na+ dependent nucleoside transporter C-terminus KM394_03280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM394_03285 PF00571 CBS domain KM394_03285 PF03471 Transporter associated domain KM394_03285 PF01595 Cyclin M transmembrane N-terminal domain KM394_03290 PF00206 Lyase KM394_03290 PF10415 Fumarase C C-terminus KM394_03295 PF02652 L-lactate permease KM394_03300 PF01022 Bacterial regulatory protein, arsR family KM394_03305 PF08141 Small acid-soluble spore protein H family KM394_03310 PF00854 POT family KM394_03315 PF01497 Periplasmic binding protein KM394_03320 PF01032 FecCD transport family KM394_03325 PF01032 FecCD transport family KM394_03330 PF00005 ABC transporter KM394_03335 PF08241 Methyltransferase domain KM394_03340 PF00155 Aminotransferase class I and II KM394_03345 PF01370 NAD dependent epimerase/dehydratase family KM394_03350 PF13344 Haloacid dehalogenase-like hydrolase KM394_03350 PF00293 NUDIX domain KM394_03355 PF00092 von Willebrand factor type A domain KM394_03360 PF07728 AAA domain (dynein-related subfamily) KM394_03365 PF13396 Phospholipase_D-nuclease N-terminal KM394_03365 PF13091 PLD-like domain KM394_03380 PF00563 EAL domain KM394_03380 PF00990 Diguanylate cyclase, GGDEF domain KM394_03380 PF03707 Bacterial signalling protein N terminal repeat KM394_03385 PF13520 Amino acid permease KM394_03390 PF00392 Bacterial regulatory proteins, gntR family KM394_03390 PF07702 UTRA domain KM394_03395 PF02378 Phosphotransferase system, EIIC KM394_03395 PF00367 phosphotransferase system, EIIB KM394_03400 PF16657 Maltogenic Amylase, C-terminal domain KM394_03400 PF00128 Alpha amylase, catalytic domain KM394_03415 PF03323 Bacillus/Clostridium GerA spore germination protein KM394_03425 PF01636 Phosphotransferase enzyme family KM394_03430 PF01235 Sodium:alanine symporter family KM394_03435 PF00005 ABC transporter KM394_03440 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM394_03445 PF00528 Binding-protein-dependent transport system inner membrane component KM394_03450 PF00528 Binding-protein-dependent transport system inner membrane component KM394_03455 PF00324 Amino acid permease KM394_03480 PF13280 WYL domain KM394_03480 PF08279 HTH domain KM394_03485 PF01872 RibD C-terminal domain KM394_03490 PF00672 HAMP domain KM394_03490 PF00512 His Kinase A (phospho-acceptor) domain KM394_03490 PF18698 Histidine kinase sensor domain KM394_03490 PF00989 PAS fold KM394_03490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_03495 PF00072 Response regulator receiver domain KM394_03495 PF00486 Transcriptional regulatory protein, C terminal KM394_03505 PF00916 Sulfate permease family KM394_03505 PF01740 STAS domain KM394_03510 PF00582 Universal stress protein family KM394_03520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_03525 PF00528 Binding-protein-dependent transport system inner membrane component KM394_03530 PF00528 Binding-protein-dependent transport system inner membrane component KM394_03535 PF00005 ABC transporter KM394_03535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM394_03540 PF00005 ABC transporter KM394_03540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM394_03545 PF07690 Major Facilitator Superfamily KM394_03550 PF01047 MarR family KM394_03560 PF00356 Bacterial regulatory proteins, lacI family KM394_03565 PF00294 pfkB family carbohydrate kinase KM394_03570 PF05025 RbsD / FucU transport protein family KM394_03575 PF00005 ABC transporter KM394_03580 PF02653 Branched-chain amino acid transport system / permease component KM394_03585 PF13407 Periplasmic binding protein domain KM394_03590 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM394_03595 PF05547 Immune inhibitor A peptidase M6 KM394_03610 PF00107 Zinc-binding dehydrogenase KM394_03610 PF08240 Alcohol dehydrogenase GroES-like domain KM394_03620 PF00882 Zinc dependent phospholipase C KM394_03625 PF03372 Endonuclease/Exonuclease/phosphatase family KM394_03650 PF02673 Bacitracin resistance protein BacA KM394_03655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM394_03655 PF00672 HAMP domain KM394_03655 PF02743 Cache domain KM394_03660 PF01476 LysM domain KM394_03660 PF06725 3D domain KM394_03665 PF01381 Helix-turn-helix KM394_03675 PF04203 Sortase domain KM394_03680 PF00854 POT family KM394_03685 PF05525 Branched-chain amino acid transport protein KM394_03700 PF00324 Amino acid permease KM394_03705 PF00860 Permease family KM394_03730 PF02080 TrkA-C domain KM394_03730 PF02254 TrkA-N domain KM394_03730 PF00999 Sodium/hydrogen exchanger family KM394_03740 PF00510 Cytochrome c oxidase subunit III KM394_03745 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM394_03750 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM394_03755 PF00324 Amino acid permease KM394_03760 PF13529 Peptidase_C39 like family KM394_03765 PF01546 Peptidase family M20/M25/M40 KM394_03765 PF07687 Peptidase dimerisation domain KM394_03770 PF11755 Protein of unknown function (DUF3311) KM394_03775 PF00474 Sodium:solute symporter family KM394_03780 PF03323 Bacillus/Clostridium GerA spore germination protein KM394_03785 PF03845 Spore germination protein KM394_03790 PF05504 Spore germination B3/ GerAC like, C-terminal KM394_03795 PF07664 Ferrous iron transport protein B C terminus KM394_03795 PF17910 FeoB cytosolic helical domain KM394_03795 PF02421 Ferrous iron transport protein B KM394_03795 PF07670 Nucleoside recognition KM394_03800 PF07664 Ferrous iron transport protein B C terminus KM394_03800 PF17910 FeoB cytosolic helical domain KM394_03800 PF02421 Ferrous iron transport protein B KM394_03800 PF07670 Nucleoside recognition KM394_03805 PF07670 Nucleoside recognition KM394_03805 PF02421 Ferrous iron transport protein B KM394_03805 PF04023 FeoA domain KM394_03805 PF07664 Ferrous iron transport protein B C terminus KM394_03805 PF17910 FeoB cytosolic helical domain KM394_03810 PF12849 PBP superfamily domain KM394_03815 PF00528 Binding-protein-dependent transport system inner membrane component KM394_03820 PF00528 Binding-protein-dependent transport system inner membrane component KM394_03830 PF00873 AcrB/AcrD/AcrF family KM394_03950 PF00571 CBS domain KM394_03965 PF08239 Bacterial SH3 domain KM394_03965 PF00246 Zinc carboxypeptidase KM394_03970 PF03070 TENA/THI-4/PQQC family KM394_03975 PF00005 ABC transporter KM394_03980 PF00528 Binding-protein-dependent transport system inner membrane component KM394_03985 PF09084 NMT1/THI5 like KM394_03990 PF02581 Thiamine monophosphate synthase KM394_03995 PF01266 FAD dependent oxidoreductase KM394_04000 PF02597 ThiS family KM394_04005 PF05690 Thiazole biosynthesis protein ThiG KM394_04010 PF00899 ThiF family KM394_04015 PF08543 Phosphomethylpyrimidine kinase KM394_04040 PF03814 Potassium-transporting ATPase A subunit KM394_04050 PF02669 K+-transporting ATPase, c chain KM394_04055 PF02702 Osmosensitive K+ channel His kinase sensor domain KM394_04060 PF07690 Major Facilitator Superfamily KM394_04065 PF01047 MarR family KM394_04080 PF00860 Permease family KM394_04100 PF00294 pfkB family carbohydrate kinase KM394_04105 PF00251 Glycosyl hydrolases family 32 N-terminal domain KM394_04105 PF08244 Glycosyl hydrolases family 32 C terminal KM394_04110 PF02378 Phosphotransferase system, EIIC KM394_04110 PF00367 phosphotransferase system, EIIB KM394_04115 PF00356 Bacterial regulatory proteins, lacI family KM394_04115 PF13407 Periplasmic binding protein domain KM394_04125 PF00085 Thioredoxin KM394_04130 PF02600 Disulfide bond formation protein DsbB KM394_04135 PF14148 YhdB-like protein KM394_04155 PF03323 Bacillus/Clostridium GerA spore germination protein KM394_04165 PF00881 Nitroreductase family KM394_04170 PF04293 SpoVR like protein KM394_04195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM394_04195 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_04200 PF02583 Metal-sensitive transcriptional repressor KM394_04205 PF00581 Rhodanese-like domain KM394_04205 PF01206 Sulfurtransferase TusA KM394_04210 PF00753 Metallo-beta-lactamase superfamily KM394_04210 PF00581 Rhodanese-like domain KM394_04215 PF01206 Sulfurtransferase TusA KM394_04220 PF00581 Rhodanese-like domain KM394_04230 PF13686 DsrE/DsrF/DrsH-like family KM394_04235 PF01925 Sulfite exporter TauE/SafE KM394_04245 PF03816 Cell envelope-related transcriptional attenuator domain KM394_04250 PF00107 Zinc-binding dehydrogenase KM394_04250 PF08240 Alcohol dehydrogenase GroES-like domain KM394_04255 PF02690 Na+/Pi-cotransporter KM394_04260 PF07690 Major Facilitator Superfamily KM394_04270 PF05043 Mga helix-turn-helix domain KM394_04270 PF00874 PRD domain KM394_04270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM394_04270 PF08279 HTH domain KM394_04275 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM394_04280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM394_04285 PF02378 Phosphotransferase system, EIIC KM394_04300 PF06725 3D domain KM394_04300 PF01476 LysM domain KM394_04305 PF12704 MacB-like periplasmic core domain KM394_04305 PF02687 FtsX-like permease family KM394_04310 PF00005 ABC transporter KM394_04320 PF09529 Integral membrane protein (intg_mem_TP0381) KM394_04335 PF05525 Branched-chain amino acid transport protein KM394_04340 PF05067 Manganese containing catalase KM394_04345 PF12652 CotJB protein KM394_04350 PF11007 Spore coat associated protein JA (CotJA) KM394_04365 PF02735 Ku70/Ku80 beta-barrel domain KM394_04375 PF09335 SNARE associated Golgi protein KM394_04410 PF13520 Amino acid permease KM394_04415 PF00999 Sodium/hydrogen exchanger family KM394_04425 PF01380 SIS domain KM394_04425 PF01418 Helix-turn-helix domain, rpiR family KM394_04430 PF01380 SIS domain KM394_04435 PF02378 Phosphotransferase system, EIIC KM394_04435 PF00367 phosphotransferase system, EIIB KM394_04445 PF07681 DoxX KM394_04460 PF00892 EamA-like transporter family KM394_04465 PF01037 Lrp/AsnC ligand binding domain KM394_04475 PF00893 Small Multidrug Resistance protein KM394_04480 PF00893 Small Multidrug Resistance protein KM394_04485 PF00440 Bacterial regulatory proteins, tetR family KM394_04485 PF17934 Tetracyclin repressor-like, C-terminal domain KM394_04490 PF07690 Major Facilitator Superfamily KM394_04495 PF01638 HxlR-like helix-turn-helix KM394_04505 PF02525 Flavodoxin-like fold KM394_04510 PF12793 Sugar transport-related sRNA regulator N-term KM394_04510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_04515 PF07690 Major Facilitator Superfamily KM394_04525 PF01965 DJ-1/PfpI family KM394_04530 PF00199 Catalase KM394_04530 PF18011 C-terminal domain found in long catalases KM394_04530 PF06628 Catalase-related immune-responsive KM394_04540 PF13520 Amino acid permease KM394_04545 PF01177 Asp/Glu/Hydantoin racemase KM394_04555 PF00171 Aldehyde dehydrogenase family KM394_04560 PF00664 ABC transporter transmembrane region KM394_04560 PF00005 ABC transporter KM394_04570 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM394_04575 PF00528 Binding-protein-dependent transport system inner membrane component KM394_04580 PF00005 ABC transporter KM394_04585 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM394_04595 PF14398 YheC/D like ATP-grasp KM394_04605 PF04286 Protein of unknown function (DUF445) KM394_04610 PF06133 Control of competence regulator ComK, YlbF/YmcA KM394_04625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM394_04625 PF00205 Thiamine pyrophosphate enzyme, central domain KM394_04625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM394_04630 PF03306 Alpha-acetolactate decarboxylase KM394_04640 PF02245 Methylpurine-DNA glycosylase (MPG) KM394_04660 PF04055 Radical SAM superfamily KM394_04665 PF00501 AMP-binding enzyme KM394_04665 PF13193 AMP-binding enzyme C-terminal domain KM394_04675 PF01740 STAS domain KM394_04675 PF00916 Sulfate permease family KM394_04695 PF01043 SecA preprotein cross-linking domain KM394_04695 PF07516 SecA Wing and Scaffold domain KM394_04695 PF07517 SecA DEAD-like domain KM394_04700 PF01943 Polysaccharide biosynthesis protein KM394_04700 PF14667 Polysaccharide biosynthesis C-terminal domain KM394_04710 PF00395 S-layer homology domain KM394_04710 PF02368 Bacterial Ig-like domain (group 2) KM394_04710 PF13205 Bacterial Ig-like domain KM394_04715 PF00395 S-layer homology domain KM394_04725 PF03062 MBOAT, membrane-bound O-acyltransferase family KM394_04730 PF03062 MBOAT, membrane-bound O-acyltransferase family KM394_04745 PF00378 Enoyl-CoA hydratase/isomerase KM394_04765 PF05343 M42 glutamyl aminopeptidase KM394_04770 PF00395 S-layer homology domain KM394_04770 PF01520 N-acetylmuramoyl-L-alanine amidase KM394_04785 PF05544 Proline racemase KM394_04790 PF02423 Ornithine cyclodeaminase/mu-crystallin family KM394_04820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_04825 PF00528 Binding-protein-dependent transport system inner membrane component KM394_04830 PF00528 Binding-protein-dependent transport system inner membrane component KM394_04830 PF12911 N-terminal TM domain of oligopeptide transport permease C KM394_04840 PF00005 ABC transporter KM394_04840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM394_04845 PF01541 GIY-YIG catalytic domain KM394_04875 PF00083 Sugar (and other) transporter KM394_04880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_04880 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM394_04885 PF00072 Response regulator receiver domain KM394_04885 PF12431 Transcriptional regulator KM394_04885 PF08279 HTH domain KM394_04890 PF03401 Tripartite tricarboxylate transporter family receptor KM394_04895 PF02342 TerD domain KM394_04920 PF06445 GyrI-like small molecule binding domain KM394_04920 PF13411 MerR HTH family regulatory protein KM394_04935 PF00772 DnaB-like helicase N terminal domain KM394_04935 PF03796 DnaB-like helicase C terminal domain KM394_04960 PF01925 Sulfite exporter TauE/SafE KM394_04975 PF07690 Major Facilitator Superfamily KM394_05020 PF07993 Male sterility protein KM394_05020 PF00550 Phosphopantetheine attachment site KM394_05025 PF18665 Tetracyclin repressor-like, C-terminal domain KM394_05025 PF00440 Bacterial regulatory proteins, tetR family KM394_05045 PF01066 CDP-alcohol phosphatidyltransferase KM394_05065 PF02733 Dak1 domain KM394_05075 PF02733 Dak1 domain KM394_05080 PF02525 Flavodoxin-like fold KM394_05085 PF02082 Transcriptional regulator KM394_05115 PF00672 HAMP domain KM394_05115 PF01966 HD domain KM394_05135 PF00395 S-layer homology domain KM394_05160 PF11181 Heat induced stress protein YflT KM394_05165 PF05532 CsbD-like KM394_05180 PF01740 STAS domain KM394_05185 PF13581 Histidine kinase-like ATPase domain KM394_05190 PF04545 Sigma-70, region 4 KM394_05190 PF04542 Sigma-70 region 2 KM394_05190 PF04539 Sigma-70 region 3 KM394_05200 PF07228 Stage II sporulation protein E (SpoIIE) KM394_05200 PF13426 PAS domain KM394_05205 PF01739 CheR methyltransferase, SAM binding domain KM394_05205 PF03705 CheR methyltransferase, all-alpha domain KM394_05210 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM394_05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_05210 PF00512 His Kinase A (phospho-acceptor) domain KM394_05210 PF01627 Hpt domain KM394_05210 PF00072 Response regulator receiver domain KM394_05235 PF01906 Putative heavy-metal-binding KM394_05245 PF08240 Alcohol dehydrogenase GroES-like domain KM394_05245 PF00107 Zinc-binding dehydrogenase KM394_05250 PF11121 Protein of unknown function (DUF2639) KM394_05265 PF00149 Calcineurin-like phosphoesterase KM394_05270 PF13514 AAA domain KM394_05275 PF12323 Helix-turn-helix domain KM394_05275 PF01385 Probable transposase KM394_05275 PF07282 Putative transposase DNA-binding domain KM394_05285 PF01336 OB-fold nucleic acid binding domain KM394_05285 PF01966 HD domain KM394_05290 PF00440 Bacterial regulatory proteins, tetR family KM394_05295 PF07690 Major Facilitator Superfamily KM394_05300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM394_05305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM394_05310 PF18801 response regulator aspartate phosphatase H, N terminal KM394_05315 PF00561 alpha/beta hydrolase fold KM394_05315 PF08386 TAP-like protein KM394_05335 PF04309 Glycerol-3-phosphate responsive antiterminator KM394_05340 PF00230 Major intrinsic protein KM394_05345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM394_05345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM394_05350 PF01266 FAD dependent oxidoreductase KM394_05350 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KM394_05365 PF04542 Sigma-70 region 2 KM394_05365 PF08281 Sigma-70, region 4 KM394_05390 PF07690 Major Facilitator Superfamily KM394_05395 PF07690 Major Facilitator Superfamily KM394_05405 PF13538 UvrD-like helicase C-terminal domain KM394_05425 PF01047 MarR family KM394_05430 PF12732 YtxH-like protein KM394_05435 PF01230 HIT domain KM394_05440 PF00005 ABC transporter KM394_05445 PF05975 Bacterial ABC transporter protein EcsB KM394_05450 PF12787 EcsC protein family KM394_05460 PF17934 Tetracyclin repressor-like, C-terminal domain KM394_05460 PF00440 Bacterial regulatory proteins, tetR family KM394_05470 PF03703 Bacterial PH domain KM394_05520 PF03703 Bacterial PH domain KM394_05525 PF03703 Bacterial PH domain KM394_05530 PF03992 Antibiotic biosynthesis monooxygenase KM394_05540 PF01208 Uroporphyrinogen decarboxylase (URO-D) KM394_05545 PF00762 Ferrochelatase KM394_05550 PF01593 Flavin containing amine oxidoreductase KM394_05575 PF03965 Penicillinase repressor KM394_05585 PF17932 Tetracyclin repressor-like, C-terminal domain KM394_05585 PF00440 Bacterial regulatory proteins, tetR family KM394_05615 PF00356 Bacterial regulatory proteins, lacI family KM394_05620 PF14149 YhfH-like protein KM394_05625 PF12706 Beta-lactamase superfamily domain KM394_05630 PF10437 Bacterial lipoate protein ligase C-terminus KM394_05630 PF03099 Biotin/lipoate A/B protein ligase family KM394_05640 PF00501 AMP-binding enzyme KM394_05640 PF13193 AMP-binding enzyme C-terminal domain KM394_05650 PF00395 S-layer homology domain KM394_05650 PF01520 N-acetylmuramoyl-L-alanine amidase KM394_05655 PF05593 RHS Repeat KM394_05670 PF05593 RHS Repeat KM394_05710 PF01966 HD domain KM394_05720 PF04542 Sigma-70 region 2 KM394_05720 PF08281 Sigma-70, region 4 KM394_05725 PF06445 GyrI-like small molecule binding domain KM394_05725 PF12833 Helix-turn-helix domain KM394_05745 PF00486 Transcriptional regulatory protein, C terminal KM394_05745 PF00072 Response regulator receiver domain KM394_05770 PF16491 CAAX prenyl protease N-terminal, five membrane helices KM394_05770 PF01435 Peptidase family M48 KM394_05780 PF00892 EamA-like transporter family KM394_05785 PF03424 Carbohydrate binding domain (family 17/28) KM394_05785 PF00150 Cellulase (glycosyl hydrolase family 5) KM394_05785 PF00395 S-layer homology domain KM394_05795 PF00395 S-layer homology domain KM394_05800 PF01274 Malate synthase KM394_05805 PF00463 Isocitrate lyase family KM394_05815 PF00313 'Cold-shock' DNA-binding domain KM394_05830 PF06338 ComK protein KM394_05835 PF09335 SNARE associated Golgi protein KM394_05840 PF10502 Signal peptidase, peptidase S26 KM394_05845 PF13361 UvrD-like helicase C-terminal domain KM394_05845 PF12705 PD-(D/E)XK nuclease superfamily KM394_05850 PF13361 UvrD-like helicase C-terminal domain KM394_05850 PF00580 UvrD/REP helicase N-terminal domain KM394_05850 PF12705 PD-(D/E)XK nuclease superfamily KM394_05860 PF10676 Spore germination protein gerPA/gerPF KM394_05865 PF10970 Spore germination protein GerPE KM394_05875 PF10737 Spore germination protein GerPC KM394_05880 PF10803 Spore germination GerPB KM394_05885 PF10676 Spore germination protein gerPA/gerPF KM394_05895 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM394_05905 PF00202 Aminotransferase class-III KM394_05910 PF07457 Protein of unknown function (DUF1516) KM394_05920 PF00733 Asparagine synthase KM394_05920 PF13537 Glutamine amidotransferase domain KM394_05925 PF00762 Ferrochelatase KM394_05930 PF00199 Catalase KM394_05930 PF06628 Catalase-related immune-responsive KM394_05935 PF00909 Ammonium Transporter Family KM394_05940 PF00128 Alpha amylase, catalytic domain KM394_05950 PF04461 Protein of unknown function (DUF520) KM394_05955 PF17783 CvfB-like winged helix domain KM394_05955 PF13509 S1 domain KM394_05965 PF00639 PPIC-type PPIASE domain KM394_05975 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM394_05975 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM394_05980 PF12758 Protein of unknown function (DUF3813) KM394_05995 PF14168 YjzC-like protein KM394_06000 PF10431 C-terminal, D2-small domain, of ClpB protein KM394_06000 PF00004 ATPase family associated with various cellular activities (AAA) KM394_06000 PF07724 AAA domain (Cdc48 subfamily) KM394_06000 PF17871 AAA lid domain KM394_06000 PF02861 Clp amino terminal domain, pathogenicity island component KM394_06020 PF10815 ComZ KM394_06025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM394_06025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM394_06030 PF00109 Beta-ketoacyl synthase, N-terminal domain KM394_06030 PF02801 Beta-ketoacyl synthase, C-terminal domain KM394_06035 PF10026 Predicted Zn-dependent protease (DUF2268) KM394_06040 PF12227 Protein of unknown function (DUF3603) KM394_06045 PF00579 tRNA synthetases class I (W and Y) KM394_06055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_06060 PF00528 Binding-protein-dependent transport system inner membrane component KM394_06065 PF12911 N-terminal TM domain of oligopeptide transport permease C KM394_06065 PF00528 Binding-protein-dependent transport system inner membrane component KM394_06070 PF00005 ABC transporter KM394_06070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM394_06075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM394_06075 PF00005 ABC transporter KM394_06080 PF01554 MatE KM394_06085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_06095 PF03960 ArsC family KM394_06100 PF03741 Integral membrane protein TerC family KM394_06105 PF05389 Negative regulator of genetic competence (MecA) KM394_06110 PF13091 PLD-like domain KM394_06110 PF13396 Phospholipase_D-nuclease N-terminal KM394_06120 PF01432 Peptidase family M3 KM394_06120 PF08439 Oligopeptidase F KM394_06135 PF01152 Bacterial-like globin KM394_06140 PF01928 CYTH domain KM394_06150 PF04607 Region found in RelA / SpoT proteins KM394_06155 PF01513 ATP-NAD kinase KM394_06160 PF00849 RNA pseudouridylate synthase KM394_06170 PF00149 Calcineurin-like phosphoesterase KM394_06180 PF00535 Glycosyl transferase family 2 KM394_06185 PF08241 Methyltransferase domain KM394_06190 PF05711 Macrocin-O-methyltransferase (TylF) KM394_06200 PF00535 Glycosyl transferase family 2 KM394_06200 PF13181 Tetratricopeptide repeat KM394_06220 PF00483 Nucleotidyl transferase KM394_06225 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KM394_06230 PF16363 GDP-mannose 4,6 dehydratase KM394_06235 PF04321 RmlD substrate binding domain KM394_06255 PF07098 Protein of unknown function (DUF1360) KM394_06275 PF00580 UvrD/REP helicase N-terminal domain KM394_06275 PF13361 UvrD-like helicase C-terminal domain KM394_06280 PF13673 Acetyltransferase (GNAT) domain KM394_06290 PF00756 Putative esterase KM394_06305 PF02368 Bacterial Ig-like domain (group 2) KM394_06310 PF00474 Sodium:solute symporter family KM394_06315 PF04715 Anthranilate synthase component I, N terminal region KM394_06315 PF00425 chorismate binding enzyme KM394_06320 PF00117 Glutamine amidotransferase class-I KM394_06320 PF02885 Glycosyl transferase family, helical bundle domain KM394_06320 PF00591 Glycosyl transferase family, a/b domain KM394_06325 PF02885 Glycosyl transferase family, helical bundle domain KM394_06325 PF00591 Glycosyl transferase family, a/b domain KM394_06330 PF00218 Indole-3-glycerol phosphate synthase KM394_06335 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KM394_06340 PF00291 Pyridoxal-phosphate dependent enzyme KM394_06345 PF00290 Tryptophan synthase alpha chain KM394_06355 PF02652 L-lactate permease KM394_06360 PF10042 Uncharacterized conserved protein (DUF2278) KM394_06385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM394_06385 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_06415 PF02817 e3 binding domain KM394_06415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM394_06415 PF00364 Biotin-requiring enzyme KM394_06420 PF00676 Dehydrogenase E1 component KM394_06420 PF16870 2-oxoglutarate dehydrogenase C-terminal KM394_06420 PF02779 Transketolase, pyrimidine binding domain KM394_06425 PF01381 Helix-turn-helix KM394_06485 PF13649 Methyltransferase domain KM394_06495 PF00768 D-alanyl-D-alanine carboxypeptidase KM394_06495 PF07943 Penicillin-binding protein 5, C-terminal domain KM394_06505 PF12389 Camelysin metallo-endopeptidase KM394_06515 PF12389 Camelysin metallo-endopeptidase KM394_06520 PF08671 Anti-repressor SinI KM394_06520 PF01381 Helix-turn-helix KM394_06530 PF05547 Immune inhibitor A peptidase M6 KM394_06535 PF00171 Aldehyde dehydrogenase family KM394_06540 PF08402 TOBE domain KM394_06540 PF00005 ABC transporter KM394_06545 PF00528 Binding-protein-dependent transport system inner membrane component KM394_06550 PF00528 Binding-protein-dependent transport system inner membrane component KM394_06555 PF13416 Bacterial extracellular solute-binding protein KM394_06565 PF03176 MMPL family KM394_06575 PF00849 RNA pseudouridylate synthase KM394_06575 PF01479 S4 domain KM394_06585 PF00188 Cysteine-rich secretory protein family KM394_06590 PF13183 4Fe-4S dicluster domain KM394_06590 PF02754 Cysteine-rich domain KM394_06595 PF02913 FAD linked oxidases, C-terminal domain KM394_06595 PF01565 FAD binding domain KM394_06600 PF13556 PucR C-terminal helix-turn-helix domain KM394_06600 PF17853 GGDEF-like domain KM394_06600 PF05651 Putative sugar diacid recognition KM394_06610 PF00072 Response regulator receiver domain KM394_06610 PF00486 Transcriptional regulatory protein, C terminal KM394_06615 PF00672 HAMP domain KM394_06615 PF00989 PAS fold KM394_06615 PF00512 His Kinase A (phospho-acceptor) domain KM394_06615 PF18698 Histidine kinase sensor domain KM394_06615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_06620 PF07729 FCD domain KM394_06620 PF00392 Bacterial regulatory proteins, gntR family KM394_06625 PF02754 Cysteine-rich domain KM394_06630 PF11870 Domain of unknown function (DUF3390) KM394_06630 PF02589 LUD domain KM394_06630 PF13183 4Fe-4S dicluster domain KM394_06635 PF02589 LUD domain KM394_06640 PF01478 Type IV leader peptidase family KM394_06640 PF06750 Bacterial Peptidase A24 N-terminal domain KM394_06655 PF01226 Formate/nitrite transporter KM394_06660 PF03741 Integral membrane protein TerC family KM394_06665 PF02386 Cation transport protein KM394_06670 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM394_06675 PF01575 MaoC like domain KM394_06700 PF00561 alpha/beta hydrolase fold KM394_06705 PF01266 FAD dependent oxidoreductase KM394_06710 PF02386 Cation transport protein KM394_06740 PF13419 Haloacid dehalogenase-like hydrolase KM394_06745 PF00266 Aminotransferase class-V KM394_06755 PF08220 DeoR-like helix-turn-helix domain KM394_06755 PF00455 DeoR C terminal sensor domain KM394_06775 PF04748 Divergent polysaccharide deacetylase KM394_06780 PF09388 Spo0E like sporulation regulatory protein KM394_06785 PF00512 His Kinase A (phospho-acceptor) domain KM394_06785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_06785 PF02743 Cache domain KM394_06790 PF01047 MarR family KM394_06800 PF12867 DinB superfamily KM394_06805 PF00989 PAS fold KM394_06805 PF13426 PAS domain KM394_06805 PF13188 PAS domain KM394_06805 PF00512 His Kinase A (phospho-acceptor) domain KM394_06805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_06810 PF06508 Queuosine biosynthesis protein QueC KM394_06815 PF01242 6-pyruvoyl tetrahydropterin synthase KM394_06820 PF04055 Radical SAM superfamily KM394_06825 PF14489 QueF-like protein KM394_06830 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KM394_06860 PF07972 NrdI Flavodoxin like KM394_06880 PF00268 Ribonucleotide reductase, small chain KM394_06885 PF00392 Bacterial regulatory proteins, gntR family KM394_06890 PF00005 ABC transporter KM394_06900 PF00005 ABC transporter KM394_06920 PF01037 Lrp/AsnC ligand binding domain KM394_06930 PF00857 Isochorismatase family KM394_06940 PF17676 LD-carboxypeptidase C-terminal domain KM394_06940 PF02016 LD-carboxypeptidase N-terminal domain KM394_06945 PF03060 Nitronate monooxygenase KM394_06950 PF04914 DltD protein KM394_06955 PF00550 Phosphopantetheine attachment site KM394_06960 PF03062 MBOAT, membrane-bound O-acyltransferase family KM394_06965 PF00501 AMP-binding enzyme KM394_06965 PF13193 AMP-binding enzyme C-terminal domain KM394_06975 PF07687 Peptidase dimerisation domain KM394_06975 PF01546 Peptidase family M20/M25/M40 KM394_06980 PF00258 Flavodoxin KM394_06995 PF01636 Phosphotransferase enzyme family KM394_07015 PF01554 MatE KM394_07020 PF02673 Bacitracin resistance protein BacA KM394_07035 PF01047 MarR family KM394_07045 PF00375 Sodium:dicarboxylate symporter family KM394_07050 PF02386 Cation transport protein KM394_07060 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM394_07070 PF03698 Uncharacterised protein family (UPF0180) KM394_07085 PF01063 Amino-transferase class IV KM394_07090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM394_07090 PF00205 Thiamine pyrophosphate enzyme, central domain KM394_07090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM394_07095 PF01842 ACT domain KM394_07095 PF10369 Small subunit of acetolactate synthase KM394_07100 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM394_07100 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM394_07105 PF00682 HMGL-like KM394_07105 PF08502 LeuA allosteric (dimerisation) domain KM394_07110 PF00180 Isocitrate/isopropylmalate dehydrogenase KM394_07115 PF00330 Aconitase family (aconitate hydratase) KM394_07120 PF00694 Aconitase C-terminal domain KM394_07125 PF13393 Histidyl-tRNA synthetase KM394_07130 PF01634 ATP phosphoribosyltransferase KM394_07135 PF00815 Histidinol dehydrogenase KM394_07140 PF00475 Imidazoleglycerol-phosphate dehydratase KM394_07145 PF00117 Glutamine amidotransferase class-I KM394_07150 PF00977 Histidine biosynthesis protein KM394_07155 PF00977 Histidine biosynthesis protein KM394_07160 PF01502 Phosphoribosyl-AMP cyclohydrolase KM394_07165 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KM394_07170 PF02811 PHP domain KM394_07180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM394_07180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM394_07185 PF01066 CDP-alcohol phosphatidyltransferase KM394_07190 PF00884 Sulfatase KM394_07200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KM394_07200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KM394_07210 PF01507 Phosphoadenosine phosphosulfate reductase family KM394_07215 PF14306 PUA-like domain KM394_07215 PF01747 ATP-sulfurylase KM394_07225 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM394_07225 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM394_07235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM394_07240 PF01903 CbiX KM394_07250 PF00209 Sodium:neurotransmitter symporter family KM394_07260 PF00375 Sodium:dicarboxylate symporter family KM394_07270 PF03553 Na+/H+ antiporter family KM394_07285 PF09922 Cell wall-active antibiotics response 4TMS YvqF KM394_07290 PF00672 HAMP domain KM394_07290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_07290 PF07730 Histidine kinase KM394_07295 PF00072 Response regulator receiver domain KM394_07295 PF00196 Bacterial regulatory proteins, luxR family KM394_07305 PF05525 Branched-chain amino acid transport protein KM394_07315 PF08241 Methyltransferase domain KM394_07340 PF00042 Globin KM394_07340 PF00175 Oxidoreductase NAD-binding domain KM394_07340 PF00970 Oxidoreductase FAD-binding domain KM394_07355 PF01925 Sulfite exporter TauE/SafE KM394_07360 PF01384 Phosphate transporter family KM394_07365 PF01865 Protein of unknown function DUF47 KM394_07370 PF00905 Penicillin binding protein transpeptidase domain KM394_07370 PF00912 Transglycosylase KM394_07385 PF00512 His Kinase A (phospho-acceptor) domain KM394_07385 PF00989 PAS fold KM394_07385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_07390 PF01904 Protein of unknown function DUF72 KM394_07400 PF00589 Phage integrase family KM394_07405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_07405 PF16736 Single Cache-like KM394_07405 PF00512 His Kinase A (phospho-acceptor) domain KM394_07405 PF00989 PAS fold KM394_07410 PF01048 Phosphorylase superfamily KM394_07425 PF03706 Lysylphosphatidylglycerol synthase TM region KM394_07425 PF09924 Uncharacterised conserved protein (DUF2156) KM394_07440 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM394_07440 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM394_07445 PF00768 D-alanyl-D-alanine carboxypeptidase KM394_07445 PF07943 Penicillin-binding protein 5, C-terminal domain KM394_07450 PF07670 Nucleoside recognition KM394_07455 PF07670 Nucleoside recognition KM394_07460 PF01479 S4 domain KM394_07460 PF00849 RNA pseudouridylate synthase KM394_07465 PF00578 AhpC/TSA family KM394_07470 PF05140 ResB-like family KM394_07475 PF01578 Cytochrome C assembly protein KM394_07480 PF00486 Transcriptional regulatory protein, C terminal KM394_07480 PF00072 Response regulator receiver domain KM394_07485 PF00989 PAS fold KM394_07485 PF00672 HAMP domain KM394_07485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_07485 PF18698 Histidine kinase sensor domain KM394_07485 PF00512 His Kinase A (phospho-acceptor) domain KM394_07490 PF01923 Cobalamin adenosyltransferase KM394_07505 PF12822 ECF transporter, substrate-specific component KM394_07515 PF14493 Helix-turn-helix domain KM394_07520 PF00271 Helicase conserved C-terminal domain KM394_07520 PF00270 DEAD/DEAH box helicase KM394_07525 PF02517 CPBP intramembrane metalloprotease KM394_07540 PF02310 B12 binding domain KM394_07540 PF02607 B12 binding domain KM394_07540 PF13411 MerR HTH family regulatory protein KM394_07545 PF05389 Negative regulator of genetic competence (MecA) KM394_07550 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM394_07550 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM394_07575 PF00710 Asparaginase, N-terminal KM394_07575 PF17763 Glutaminase/Asparaginase C-terminal domain KM394_07585 PF02224 Cytidylate kinase KM394_07590 PF00575 S1 RNA binding domain KM394_07595 PF01070 FMN-dependent dehydrogenase KM394_07600 PF14140 YpzI-like protein KM394_07610 PF14045 YIEGIA protein KM394_07620 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KM394_07620 PF01926 50S ribosome-binding GTPase KM394_07625 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KM394_07625 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KM394_07635 PF10966 Protein of unknown function (DUF2768) KM394_07645 PF09547 Stage IV sporulation protein A (spore_IV_A) KM394_07650 PF00216 Bacterial DNA-binding protein KM394_07655 PF01227 GTP cyclohydrolase I KM394_07660 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KM394_07665 PF01209 ubiE/COQ5 methyltransferase family KM394_07670 PF00348 Polyprenyl synthetase KM394_07675 PF00334 Nucleoside diphosphate kinase KM394_07680 PF01264 Chorismate synthase KM394_07685 PF01761 3-dehydroquinate synthase KM394_07690 PF00155 Aminotransferase class I and II KM394_07700 PF08858 IDEAL domain KM394_07700 PF08864 UPF0302 domain KM394_07705 PF10673 Protein of unknown function (DUF2487) KM394_07710 PF00355 Rieske [2Fe-2S] domain KM394_07715 PF00033 Cytochrome b/b6/petB KM394_07720 PF00032 Cytochrome b(C-terminal)/b6/petD KM394_07720 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM394_07725 PF07187 Protein of unknown function (DUF1405) KM394_07735 PF09577 Sporulation protein YpjB (SpoYpjB) KM394_07740 PF04298 Putative neutral zinc metallopeptidase KM394_07750 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM394_07750 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM394_07755 PF03819 MazG nucleotide pyrophosphohydrolase domain KM394_07760 PF05173 Dihydrodipicolinate reductase, C-terminus KM394_07760 PF01113 Dihydrodipicolinate reductase, N-terminus KM394_07765 PF02142 MGS-like domain KM394_07770 PF02585 GlcNAc-PI de-N-acetylase KM394_07775 PF13439 Glycosyltransferase Family 4 KM394_07775 PF00534 Glycosyl transferases group 1 KM394_07780 PF01743 Poly A polymerase head domain KM394_07780 PF12627 Probable RNA and SrmB- binding site of polymerase A KM394_07780 PF13735 tRNA nucleotidyltransferase domain 2 putative KM394_07785 PF02237 Biotin protein ligase C terminal domain KM394_07785 PF03099 Biotin/lipoate A/B protein ligase family KM394_07785 PF08279 HTH domain KM394_07795 PF02548 Ketopantoate hydroxymethyltransferase KM394_07800 PF02569 Pantoate-beta-alanine ligase KM394_07805 PF02261 Aspartate decarboxylase KM394_07810 PF13307 Helicase C-terminal domain KM394_07810 PF00929 Exonuclease KM394_07810 PF04851 Type III restriction enzyme, res subunit KM394_07815 PF14084 Protein of unknown function (DUF4264) KM394_07825 PF00155 Aminotransferase class I and II KM394_07830 PF07261 Replication initiation and membrane attachment KM394_07835 PF00730 HhH-GPD superfamily base excision DNA repair protein KM394_07835 PF00633 Helix-hairpin-helix motif KM394_07835 PF10576 Iron-sulfur binding domain of endonuclease III KM394_07845 PF00912 Transglycosylase KM394_07845 PF00905 Penicillin binding protein transpeptidase domain KM394_07850 PF03838 Recombination protein U KM394_07855 PF10720 Protein of unknown function (DUF2515) KM394_07890 PF06908 YspA SLOG family KM394_07895 PF05103 DivIVA protein KM394_07905 PF01170 Putative RNA methylase family UPF0020 KM394_07905 PF02926 THUMP domain KM394_07915 PF13307 Helicase C-terminal domain KM394_07920 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KM394_07930 PF01636 Phosphotransferase enzyme family KM394_07935 PF00557 Metallopeptidase family M24 KM394_07940 PF00156 Phosphoribosyl transferase domain KM394_07945 PF00860 Permease family KM394_07950 PF04235 Protein of unknown function (DUF418) KM394_07955 PF00350 Dynamin family KM394_07965 PF00583 Acetyltransferase (GNAT) family KM394_07970 PF10752 Protein of unknown function (DUF2533) KM394_07975 PF00581 Rhodanese-like domain KM394_08010 PF00689 Cation transporting ATPase, C-terminus KM394_08010 PF00690 Cation transporter/ATPase, N-terminus KM394_08015 PF01367 5'-3' exonuclease, C-terminal SAM fold KM394_08015 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM394_08040 PF02397 Bacterial sugar transferase KM394_08055 PF00535 Glycosyl transferase family 2 KM394_08075 PF13673 Acetyltransferase (GNAT) domain KM394_08075 PF18014 Acetyltransferase (GNAT) domain KM394_08095 PF13456 Reverse transcriptase-like KM394_08100 PF01263 Aldose 1-epimerase KM394_08125 PF00313 'Cold-shock' DNA-binding domain KM394_08135 PF01810 LysE type translocator KM394_08150 PF04341 Protein of unknown function, DUF485 KM394_08155 PF00474 Sodium:solute symporter family KM394_08160 PF00202 Aminotransferase class-III KM394_08170 PF00999 Sodium/hydrogen exchanger family KM394_08175 PF00753 Metallo-beta-lactamase superfamily KM394_08175 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM394_08175 PF17770 Ribonuclease J C-terminal domain KM394_08180 PF06445 GyrI-like small molecule binding domain KM394_08180 PF13411 MerR HTH family regulatory protein KM394_08190 PF04239 Protein of unknown function (DUF421) KM394_08195 PF02698 DUF218 domain KM394_08205 PF00881 Nitroreductase family KM394_08250 PF17209 Hfq protein KM394_08260 PF01618 MotA/TolQ/ExbB proton channel family KM394_08265 PF00691 OmpA family KM394_08265 PF13677 Membrane MotB of proton-channel complex MotA/MotB KM394_08270 PF00072 Response regulator receiver domain KM394_08275 PF01584 CheW-like domain KM394_08275 PF02895 Signal transducing histidine kinase, homodimeric domain KM394_08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_08275 PF01627 Hpt domain KM394_08275 PF07194 P2 response regulator binding domain KM394_08280 PF01584 CheW-like domain KM394_08280 PF02895 Signal transducing histidine kinase, homodimeric domain KM394_08280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_08280 PF01627 Hpt domain KM394_08280 PF07194 P2 response regulator binding domain KM394_08285 PF04509 CheC-like family KM394_08285 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM394_08300 PF01739 CheR methyltransferase, SAM binding domain KM394_08300 PF03705 CheR methyltransferase, all-alpha domain KM394_08320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM394_08320 PF00460 Flagella basal body rod protein KM394_08345 PF00460 Flagella basal body rod protein KM394_08350 PF00460 Flagella basal body rod protein KM394_08350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM394_08355 PF02049 Flagellar hook-basal body complex protein FliE KM394_08365 PF01706 FliG C-terminal domain KM394_08365 PF14841 FliG middle domain KM394_08365 PF14842 FliG N-terminal domain KM394_08375 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM394_08375 PF18269 T3SS EscN ATPase C-terminal domain KM394_08375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM394_08400 PF07559 Flagellar basal body protein FlaE KM394_08400 PF00460 Flagella basal body rod protein KM394_08400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM394_08415 PF01584 CheW-like domain KM394_08415 PF00072 Response regulator receiver domain KM394_08420 PF12181 DNA binding domain of the motility gene repressor (MogR) KM394_08425 PF00535 Glycosyl transferase family 2 KM394_08465 PF00669 Bacterial flagellin N-terminal helical region KM394_08465 PF00700 Bacterial flagellin C-terminal helical region KM394_08470 PF01464 Transglycosylase SLT domain KM394_08485 PF04509 CheC-like family KM394_08485 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM394_08495 PF00813 FliP family KM394_08500 PF01313 Bacterial export proteins, family 3 KM394_08510 PF01312 FlhB HrpN YscU SpaS Family KM394_08515 PF00771 FHIPEP family KM394_08520 PF00448 SRP54-type protein, GTPase domain KM394_08525 PF00460 Flagella basal body rod protein KM394_08525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM394_08530 PF01411 tRNA synthetases class II (A) KM394_08530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM394_08530 PF02272 DHHA1 domain KM394_08555 PF17932 Tetracyclin repressor-like, C-terminal domain KM394_08555 PF00440 Bacterial regulatory proteins, tetR family KM394_08560 PF17329 Family of unknown function (DUF5367) KM394_08575 PF03992 Antibiotic biosynthesis monooxygenase KM394_08580 PF08141 Small acid-soluble spore protein H family KM394_08600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM394_08600 PF03466 LysR substrate binding domain KM394_08605 PF00005 ABC transporter KM394_08605 PF08402 TOBE domain KM394_08615 PF00528 Binding-protein-dependent transport system inner membrane component KM394_08620 PF00753 Metallo-beta-lactamase superfamily KM394_08620 PF12706 Beta-lactamase superfamily domain KM394_08630 PF10787 Uncharacterised protein from bacillus cereus group KM394_08645 PF07943 Penicillin-binding protein 5, C-terminal domain KM394_08645 PF00768 D-alanyl-D-alanine carboxypeptidase KM394_08655 PF00300 Histidine phosphatase superfamily (branch 1) KM394_08685 PF13537 Glutamine amidotransferase domain KM394_08685 PF00733 Asparagine synthase KM394_08705 PF01545 Cation efflux family KM394_08705 PF16916 Dimerisation domain of Zinc Transporter KM394_08715 PF07729 FCD domain KM394_08715 PF00392 Bacterial regulatory proteins, gntR family KM394_08720 PF00892 EamA-like transporter family KM394_08725 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM394_08725 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM394_08730 PF03773 Predicted permease KM394_08740 PF00535 Glycosyl transferase family 2 KM394_08745 PF03553 Na+/H+ antiporter family KM394_08750 PF10415 Fumarase C C-terminus KM394_08750 PF00206 Lyase KM394_08775 PF03575 Peptidase family S51 KM394_08795 PF02683 Cytochrome C biogenesis protein transmembrane region KM394_08800 PF00578 AhpC/TSA family KM394_08820 PF00291 Pyridoxal-phosphate dependent enzyme KM394_08825 PF04286 Protein of unknown function (DUF445) KM394_08855 PF00196 Bacterial regulatory proteins, luxR family KM394_08855 PF00072 Response regulator receiver domain KM394_08860 PF07730 Histidine kinase KM394_08860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_08860 PF13492 GAF domain KM394_08860 PF13185 GAF domain KM394_08865 PF00005 ABC transporter KM394_08880 PF13091 PLD-like domain KM394_08885 PF00696 Amino acid kinase family KM394_08890 PF00375 Sodium:dicarboxylate symporter family KM394_08895 PF00206 Lyase KM394_08895 PF10415 Fumarase C C-terminus KM394_08900 PF00390 Malic enzyme, N-terminal domain KM394_08900 PF03949 Malic enzyme, NAD binding domain KM394_08905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_08910 PF00072 Response regulator receiver domain KM394_08910 PF08664 YcbB domain KM394_08915 PF00271 Helicase conserved C-terminal domain KM394_08915 PF04434 SWIM zinc finger KM394_08915 PF00176 SNF2 family N-terminal domain KM394_08930 PF03590 Aspartate-ammonia ligase KM394_08950 PF13840 ACT domain KM394_08950 PF00696 Amino acid kinase family KM394_08960 PF13761 Domain of unknown function (DUF4166) KM394_08965 PF14158 YndJ-like protein KM394_08970 PF00293 NUDIX domain KM394_08975 PF02368 Bacterial Ig-like domain (group 2) KM394_08975 PF13205 Bacterial Ig-like domain KM394_08975 PF00395 S-layer homology domain KM394_08985 PF07690 Major Facilitator Superfamily KM394_09000 PF02554 Carbon starvation protein CstA KM394_09005 PF03976 Polyphosphate kinase 2 (PPK2) KM394_09015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM394_09015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM394_09025 PF16360 GTP-binding GTPase Middle Region KM394_09025 PF13167 GTP-binding GTPase N-terminal KM394_09025 PF01926 50S ribosome-binding GTPase KM394_09035 PF07690 Major Facilitator Superfamily KM394_09040 PF00291 Pyridoxal-phosphate dependent enzyme KM394_09055 PF01943 Polysaccharide biosynthesis protein KM394_09055 PF14667 Polysaccharide biosynthesis C-terminal domain KM394_09060 PF00209 Sodium:neurotransmitter symporter family KM394_09065 PF01522 Polysaccharide deacetylase KM394_09065 PF00457 Glycosyl hydrolases family 11 KM394_09065 PF03422 Carbohydrate binding module (family 6) KM394_09075 PF04239 Protein of unknown function (DUF421) KM394_09090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM394_09090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM394_09105 PF01625 Peptide methionine sulfoxide reductase KM394_09115 PF01063 Amino-transferase class IV KM394_09120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM394_09120 PF00205 Thiamine pyrophosphate enzyme, central domain KM394_09120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM394_09125 PF10369 Small subunit of acetolactate synthase KM394_09130 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM394_09130 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM394_09135 PF00920 Dehydratase family KM394_09140 PF00291 Pyridoxal-phosphate dependent enzyme KM394_09140 PF00585 C-terminal regulatory domain of Threonine dehydratase KM394_09150 PF09587 Bacterial capsule synthesis protein PGA_cap KM394_09165 PF07690 Major Facilitator Superfamily KM394_09170 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KM394_09180 PF04397 LytTr DNA-binding domain KM394_09180 PF00072 Response regulator receiver domain KM394_09185 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KM394_09185 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KM394_09200 PF01979 Amidohydrolase family KM394_09205 PF13026 Protein of unknown function (DUF3887) KM394_09205 PF12146 Serine aminopeptidase, S33 KM394_09235 PF04055 Radical SAM superfamily KM394_09235 PF13186 Iron-sulfur cluster-binding domain KM394_09245 PF00072 Response regulator receiver domain KM394_09245 PF00486 Transcriptional regulatory protein, C terminal KM394_09260 PF01566 Natural resistance-associated macrophage protein KM394_09265 PF00581 Rhodanese-like domain KM394_09265 PF12368 Rhodanase C-terminal KM394_09265 PF17773 UPF0176 acylphosphatase like domain KM394_09290 PF05791 Bacillus haemolytic enterotoxin (HBL) KM394_09305 PF04198 Putative sugar-binding domain KM394_09310 PF01791 DeoC/LacD family aldolase KM394_09315 PF01773 Na+ dependent nucleoside transporter N-terminus KM394_09315 PF07662 Na+ dependent nucleoside transporter C-terminus KM394_09320 PF02885 Glycosyl transferase family, helical bundle domain KM394_09320 PF00591 Glycosyl transferase family, a/b domain KM394_09320 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM394_09325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM394_09335 PF05979 Bacterial protein of unknown function (DUF896) KM394_09355 PF05195 Aminopeptidase P, N-terminal domain KM394_09355 PF00557 Metallopeptidase family M24 KM394_09360 PF07731 Multicopper oxidase KM394_09360 PF07732 Multicopper oxidase KM394_09365 PF01551 Peptidase family M23 KM394_09375 PF01131 DNA topoisomerase KM394_09375 PF01751 Toprim domain KM394_09375 PF13342 C-terminal repeat of topoisomerase KM394_09375 PF01396 Topoisomerase DNA binding C4 zinc finger KM394_09390 PF02525 Flavodoxin-like fold KM394_09405 PF05425 Copper resistance protein D KM394_09405 PF04234 CopC domain KM394_09405 PF13115 YtkA-like KM394_09410 PF07987 Domain of unkown function (DUF1775) KM394_09420 PF00892 EamA-like transporter family KM394_09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM394_09425 PF03466 LysR substrate binding domain KM394_09430 PF02082 Transcriptional regulator KM394_09435 PF01323 DSBA-like thioredoxin domain KM394_09440 PF00881 Nitroreductase family KM394_09445 PF01425 Amidase KM394_09450 PF01594 AI-2E family transporter KM394_09455 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM394_09455 PF00056 lactate/malate dehydrogenase, NAD binding domain KM394_09460 PF01593 Flavin containing amine oxidoreductase KM394_09465 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM394_09465 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM394_09480 PF00501 AMP-binding enzyme KM394_09480 PF13193 AMP-binding enzyme C-terminal domain KM394_09485 PF01575 MaoC like domain KM394_09490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM394_09490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM394_09500 PF12399 Branched-chain amino acid ATP-binding cassette transporter KM394_09500 PF00005 ABC transporter KM394_09505 PF00005 ABC transporter KM394_09510 PF02653 Branched-chain amino acid transport system / permease component KM394_09520 PF03466 LysR substrate binding domain KM394_09520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM394_09530 PF14552 Tautomerase enzyme KM394_09540 PF01047 MarR family KM394_09550 PF01654 Cytochrome bd terminal oxidase subunit I KM394_09555 PF02322 Cytochrome bd terminal oxidase subunit II KM394_09560 PF00005 ABC transporter KM394_09560 PF00664 ABC transporter transmembrane region KM394_09565 PF00005 ABC transporter KM394_09565 PF00664 ABC transporter transmembrane region KM394_09580 PF02016 LD-carboxypeptidase N-terminal domain KM394_09580 PF17676 LD-carboxypeptidase C-terminal domain KM394_09585 PF07943 Penicillin-binding protein 5, C-terminal domain KM394_09585 PF00768 D-alanyl-D-alanine carboxypeptidase KM394_09600 PF01476 LysM domain KM394_09600 PF00877 NlpC/P60 family KM394_09615 PF00486 Transcriptional regulatory protein, C terminal KM394_09615 PF00072 Response regulator receiver domain KM394_09620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_09620 PF00512 His Kinase A (phospho-acceptor) domain KM394_09620 PF00989 PAS fold KM394_09620 PF16736 Single Cache-like KM394_09630 PF00106 short chain dehydrogenase KM394_09640 PF04439 Streptomycin adenylyltransferase KM394_09645 PF01522 Polysaccharide deacetylase KM394_09665 PF01842 ACT domain KM394_09665 PF00742 Homoserine dehydrogenase KM394_09665 PF03447 Homoserine dehydrogenase, NAD binding domain KM394_09670 PF00291 Pyridoxal-phosphate dependent enzyme KM394_09675 PF08544 GHMP kinases C terminal KM394_09675 PF00288 GHMP kinases N terminal domain KM394_09690 PF03816 Cell envelope-related transcriptional attenuator domain KM394_09700 PF00072 Response regulator receiver domain KM394_09700 PF00486 Transcriptional regulatory protein, C terminal KM394_09705 PF16736 Single Cache-like KM394_09705 PF00512 His Kinase A (phospho-acceptor) domain KM394_09705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_09705 PF00989 PAS fold KM394_09710 PF01522 Polysaccharide deacetylase KM394_09720 PF02308 MgtC family KM394_09725 PF00583 Acetyltransferase (GNAT) family KM394_09730 PF06276 Ferric iron reductase FhuF-like transporter KM394_09730 PF04183 IucA / IucC family KM394_09735 PF06276 Ferric iron reductase FhuF-like transporter KM394_09735 PF04183 IucA / IucC family KM394_09740 PF13193 AMP-binding enzyme C-terminal domain KM394_09740 PF00501 AMP-binding enzyme KM394_09755 PF01261 Xylose isomerase-like TIM barrel KM394_09760 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM394_09770 PF01810 LysE type translocator KM394_09780 PF01734 Patatin-like phospholipase KM394_09805 PF13344 Haloacid dehalogenase-like hydrolase KM394_09805 PF00293 NUDIX domain KM394_09810 PF02540 NAD synthase KM394_09820 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM394_09820 PF18277 AbrB C-terminal domain KM394_09825 PF00082 Subtilase family KM394_09830 PF01022 Bacterial regulatory protein, arsR family KM394_09835 PF00248 Aldo/keto reductase family KM394_09840 PF07690 Major Facilitator Superfamily KM394_09860 PF03193 RsgA GTPase KM394_09865 PF02743 Cache domain KM394_09865 PF00672 HAMP domain KM394_09865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM394_09885 PF00210 Ferritin-like domain KM394_09900 PF00296 Luciferase-like monooxygenase KM394_09910 PF01593 Flavin containing amine oxidoreductase KM394_09920 PF00248 Aldo/keto reductase family KM394_09925 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM394_09925 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM394_09930 PF00583 Acetyltransferase (GNAT) family KM394_09985 PF01297 Zinc-uptake complex component A periplasmic KM394_09985 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM394_09995 PF13460 NAD(P)H-binding KM394_10000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM394_10005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM394_10005 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM394_10015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_10020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM394_10030 PF00300 Histidine phosphatase superfamily (branch 1) KM394_10040 PF08757 CotH kinase protein KM394_10045 PF00293 NUDIX domain KM394_10050 PF09335 SNARE associated Golgi protein KM394_10055 PF01943 Polysaccharide biosynthesis protein KM394_10055 PF14667 Polysaccharide biosynthesis C-terminal domain KM394_10065 PF03773 Predicted permease KM394_10070 PF09323 Domain of unknown function (DUF1980) KM394_10075 PF03061 Thioesterase superfamily KM394_10085 PF13091 PLD-like domain KM394_10085 PF13396 Phospholipase_D-nuclease N-terminal KM394_10100 PF13460 NAD(P)H-binding KM394_10105 PF04306 Protein of unknown function (DUF456) KM394_10110 PF00571 CBS domain KM394_10110 PF03471 Transporter associated domain KM394_10110 PF01595 Cyclin M transmembrane N-terminal domain KM394_10125 PF05525 Branched-chain amino acid transport protein KM394_10130 PF01588 Putative tRNA binding domain KM394_10150 PF07454 Stage II sporulation protein P (SpoIIP) KM394_10160 PF02557 D-alanyl-D-alanine carboxypeptidase KM394_10170 PF01425 Amidase KM394_10175 PF07690 Major Facilitator Superfamily KM394_10185 PF01145 SPFH domain / Band 7 family KM394_10190 PF00300 Histidine phosphatase superfamily (branch 1) KM394_10205 PF00842 Alanine racemase, C-terminal domain KM394_10205 PF01168 Alanine racemase, N-terminal domain KM394_10210 PF13847 Methyltransferase domain KM394_10225 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM394_10230 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM394_10230 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM394_10235 PF00155 Aminotransferase class I and II KM394_10235 PF00392 Bacterial regulatory proteins, gntR family KM394_10260 PF00583 Acetyltransferase (GNAT) family KM394_10310 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM394_10335 PF01209 ubiE/COQ5 methyltransferase family KM394_10340 PF01268 Formate--tetrahydrofolate ligase KM394_10350 PF00271 Helicase conserved C-terminal domain KM394_10350 PF00270 DEAD/DEAH box helicase KM394_10360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM394_10370 PF08240 Alcohol dehydrogenase GroES-like domain KM394_10370 PF00107 Zinc-binding dehydrogenase KM394_10375 PF04542 Sigma-70 region 2 KM394_10375 PF08281 Sigma-70, region 4 KM394_10400 PF00255 Glutathione peroxidase KM394_10405 PF11992 Domain of unknown function (DUF3488) KM394_10405 PF13559 Domain of unknown function (DUF4129) KM394_10405 PF01841 Transglutaminase-like superfamily KM394_10410 PF01882 Protein of unknown function DUF58 KM394_10415 PF17863 AAA lid domain KM394_10415 PF07726 ATPase family associated with various cellular activities (AAA) KM394_10430 PF14710 Respiratory nitrate reductase alpha N-terminal KM394_10430 PF01568 Molydopterin dinucleotide binding domain KM394_10430 PF00384 Molybdopterin oxidoreductase KM394_10435 PF13247 4Fe-4S dicluster domain KM394_10435 PF14711 Respiratory nitrate reductase beta C-terminal KM394_10440 PF02613 Nitrate reductase delta subunit KM394_10445 PF02665 Nitrate reductase gamma subunit KM394_10450 PF00155 Aminotransferase class I and II KM394_10450 PF00392 Bacterial regulatory proteins, gntR family KM394_10455 PF00005 ABC transporter KM394_10465 PF00325 Bacterial regulatory proteins, crp family KM394_10465 PF00027 Cyclic nucleotide-binding domain KM394_10470 PF04055 Radical SAM superfamily KM394_10470 PF06463 Molybdenum Cofactor Synthesis C KM394_10475 PF00899 ThiF family KM394_10480 PF00994 Probable molybdopterin binding domain KM394_10480 PF03454 MoeA C-terminal region (domain IV) KM394_10480 PF03453 MoeA N-terminal region (domain I and II) KM394_10485 PF02391 MoaE protein KM394_10495 PF07690 Major Facilitator Superfamily KM394_10515 PF01903 CbiX KM394_10520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM394_10525 PF00355 Rieske [2Fe-2S] domain KM394_10530 PF18267 Rubredoxin NAD+ reductase C-terminal domain KM394_10530 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_10530 PF04324 BFD-like [2Fe-2S] binding domain KM394_10530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM394_10530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM394_10535 PF01814 Hemerythrin HHE cation binding domain KM394_10535 PF04405 Domain of Unknown function (DUF542) KM394_10570 PF04232 Stage V sporulation protein S (SpoVS) KM394_10585 PF01510 N-acetylmuramoyl-L-alanine amidase KM394_10600 PF01966 HD domain KM394_10605 PF16326 ABC transporter C-terminal domain KM394_10605 PF12848 ABC transporter KM394_10605 PF00005 ABC transporter KM394_10620 PF00436 Single-strand binding protein family KM394_10625 PF00440 Bacterial regulatory proteins, tetR family KM394_10635 PF08712 Scaffold protein Nfu/NifU N terminal KM394_10635 PF13769 Virulence factor KM394_10645 PF06491 Disulphide isomerase KM394_10650 PF04445 Putative SAM-dependent methyltransferase KM394_10655 PF03485 Arginyl tRNA synthetase N terminal domain KM394_10655 PF05746 DALR anticodon binding domain KM394_10655 PF00750 tRNA synthetases class I (R) KM394_10680 PF00133 tRNA synthetases class I (I, L, M and V) KM394_10680 PF08264 Anticodon-binding domain of tRNA KM394_10700 PF00152 tRNA synthetases class II (D, K and N) KM394_10700 PF01336 OB-fold nucleic acid binding domain KM394_10720 PF01580 FtsK/SpoIIIE family KM394_10720 PF12538 DNA transporter KM394_10800 PF02595 Glycerate kinase family KM394_10805 PF00939 Sodium:sulfate symporter transmembrane region KM394_10810 PF00072 Response regulator receiver domain KM394_10810 PF00486 Transcriptional regulatory protein, C terminal KM394_10815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_10815 PF00672 HAMP domain KM394_10815 PF00512 His Kinase A (phospho-acceptor) domain KM394_10830 PF00209 Sodium:neurotransmitter symporter family KM394_10845 PF10997 Alternate to MurJ KM394_10850 PF13419 Haloacid dehalogenase-like hydrolase KM394_10860 PF00465 Iron-containing alcohol dehydrogenase KM394_10865 PF01177 Asp/Glu/Hydantoin racemase KM394_10870 PF01980 tRNA-methyltransferase O KM394_10875 PF00583 Acetyltransferase (GNAT) family KM394_10890 PF00005 ABC transporter KM394_10900 PF14005 YpjP-like protein KM394_10905 PF13419 Haloacid dehalogenase-like hydrolase KM394_10925 PF00144 Beta-lactamase KM394_10925 PF07930 D-aminopeptidase, domain B KM394_10930 PF00303 Thymidylate synthase KM394_10935 PF00186 Dihydrofolate reductase KM394_10940 PF00905 Penicillin binding protein transpeptidase domain KM394_10940 PF03717 Penicillin-binding Protein dimerisation domain KM394_10940 PF05223 NTF2-like N-terminal transpeptidase domain KM394_10945 PF02525 Flavodoxin-like fold KM394_10950 PF01553 Acyltransferase KM394_10955 PF03006 Haemolysin-III related KM394_10960 PF02416 mttA/Hcf106 family KM394_10965 PF00902 Sec-independent protein translocase protein (TatC) KM394_10975 PF02645 Uncharacterised protein, DegV family COG1307 KM394_10985 PF02630 SCO1/SenC KM394_10990 PF00011 Hsp20/alpha crystallin family KM394_10995 PF13537 Glutamine amidotransferase domain KM394_10995 PF00733 Asparagine synthase KM394_11010 PF01497 Periplasmic binding protein KM394_11015 PF01063 Amino-transferase class IV KM394_11020 PF00881 Nitroreductase family KM394_11040 PF00293 NUDIX domain KM394_11045 PF00011 Hsp20/alpha crystallin family KM394_11050 PF00924 Mechanosensitive ion channel KM394_11055 PF13185 GAF domain KM394_11055 PF07730 Histidine kinase KM394_11060 PF00072 Response regulator receiver domain KM394_11060 PF00196 Bacterial regulatory proteins, luxR family KM394_11070 PF08240 Alcohol dehydrogenase GroES-like domain KM394_11070 PF00107 Zinc-binding dehydrogenase KM394_11095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM394_11095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM394_11100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM394_11100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM394_11115 PF03358 NADPH-dependent FMN reductase KM394_11130 PF00571 CBS domain KM394_11130 PF00005 ABC transporter KM394_11135 PF00528 Binding-protein-dependent transport system inner membrane component KM394_11140 PF13520 Amino acid permease KM394_11170 PF03471 Transporter associated domain KM394_11170 PF01595 Cyclin M transmembrane N-terminal domain KM394_11170 PF00571 CBS domain KM394_11175 PF00171 Aldehyde dehydrogenase family KM394_11180 PF07997 Protein of unknown function (DUF1694) KM394_11185 PF09385 Histidine kinase N terminal KM394_11195 PF00202 Aminotransferase class-III KM394_11200 PF01144 Coenzyme A transferase KM394_11205 PF01144 Coenzyme A transferase KM394_11210 PF07687 Peptidase dimerisation domain KM394_11210 PF01546 Peptidase family M20/M25/M40 KM394_11215 PF00583 Acetyltransferase (GNAT) family KM394_11220 PF02954 Bacterial regulatory protein, Fis family KM394_11220 PF00158 Sigma-54 interaction domain KM394_11220 PF13426 PAS domain KM394_11225 PF12544 Lysine-2,3-aminomutase KM394_11230 PF14122 YokU-like protein, putative antitoxin KM394_11235 PF06855 YozE SAM-like fold KM394_11250 PF14162 YozD-like protein KM394_11265 PF07070 SpoOM protein KM394_11270 PF01569 PAP2 superfamily KM394_11275 PF16916 Dimerisation domain of Zinc Transporter KM394_11275 PF01545 Cation efflux family KM394_11295 PF04740 LXG domain of WXG superfamily KM394_11295 PF14436 Bacterial EndoU nuclease KM394_11300 PF00150 Cellulase (glycosyl hydrolase family 5) KM394_11300 PF03424 Carbohydrate binding domain (family 17/28) KM394_11300 PF00395 S-layer homology domain KM394_11310 PF04471 Restriction endonuclease KM394_11420 PF10676 Spore germination protein gerPA/gerPF KM394_11440 PF00905 Penicillin binding protein transpeptidase domain KM394_11440 PF00912 Transglycosylase KM394_11445 PF07690 Major Facilitator Superfamily KM394_11450 PF01521 Iron-sulphur cluster biosynthesis KM394_11455 PF00285 Citrate synthase, C-terminal domain KM394_11460 PF03972 MmgE/PrpD family KM394_11470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM394_11470 PF02770 Acyl-CoA dehydrogenase, middle domain KM394_11470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM394_11475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM394_11475 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM394_11480 PF00171 Aldehyde dehydrogenase family KM394_11485 PF01810 LysE type translocator KM394_11490 PF00378 Enoyl-CoA hydratase/isomerase KM394_11500 PF10763 Protein of unknown function (DUF2584) KM394_11505 PF00149 Calcineurin-like phosphoesterase KM394_11505 PF12320 Type 5 capsule protein repressor C-terminal domain KM394_11510 PF13476 AAA domain KM394_11525 PF01022 Bacterial regulatory protein, arsR family KM394_11535 PF07690 Major Facilitator Superfamily KM394_11540 PF00106 short chain dehydrogenase KM394_11545 PF00425 chorismate binding enzyme KM394_11550 PF13193 AMP-binding enzyme C-terminal domain KM394_11550 PF00501 AMP-binding enzyme KM394_11555 PF00857 Isochorismatase family KM394_11555 PF00550 Phosphopantetheine attachment site KM394_11560 PF00550 Phosphopantetheine attachment site KM394_11560 PF00668 Condensation domain KM394_11560 PF13193 AMP-binding enzyme C-terminal domain KM394_11560 PF00501 AMP-binding enzyme KM394_11560 PF00975 Thioesterase domain KM394_11565 PF03621 MbtH-like protein KM394_11570 PF07690 Major Facilitator Superfamily KM394_11585 PF00216 Bacterial DNA-binding protein KM394_11595 PF05163 DinB family KM394_11600 PF00082 Subtilase family KM394_11605 PF01235 Sodium:alanine symporter family KM394_11620 PF16291 Domain of unknown function (DUF4937 KM394_11625 PF01479 S4 domain KM394_11625 PF00849 RNA pseudouridylate synthase KM394_11630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM394_11630 PF03129 Anticodon binding domain KM394_11630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM394_11630 PF02824 TGS domain KM394_11645 PF12146 Serine aminopeptidase, S33 KM394_11650 PF07690 Major Facilitator Superfamily KM394_11670 PF13649 Methyltransferase domain KM394_11715 PF00753 Metallo-beta-lactamase superfamily KM394_11715 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM394_11725 PF03176 MMPL family KM394_11735 PF00302 Chloramphenicol acetyltransferase KM394_11750 PF00583 Acetyltransferase (GNAT) family KM394_11780 PF01593 Flavin containing amine oxidoreductase KM394_11790 PF13302 Acetyltransferase (GNAT) domain KM394_11800 PF00313 'Cold-shock' DNA-binding domain KM394_11865 PF03466 LysR substrate binding domain KM394_11865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM394_11870 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM394_11870 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM394_11885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM394_11885 PF03466 LysR substrate binding domain KM394_11890 PF03475 3-alpha domain KM394_11890 PF03473 MOSC domain KM394_11905 PF00664 ABC transporter transmembrane region KM394_11905 PF00005 ABC transporter KM394_11910 PF00664 ABC transporter transmembrane region KM394_11910 PF00005 ABC transporter KM394_11925 PF01810 LysE type translocator KM394_11930 PF07883 Cupin domain KM394_11930 PF01381 Helix-turn-helix KM394_11955 PF00890 FAD binding domain KM394_11960 PF04542 Sigma-70 region 2 KM394_11960 PF08281 Sigma-70, region 4 KM394_11960 PF12680 SnoaL-like domain KM394_11985 PF02638 Glycosyl hydrolase-like 10 KM394_11995 PF02378 Phosphotransferase system, EIIC KM394_12005 PF03702 Anhydro-N-acetylmuramic acid kinase KM394_12010 PF01869 BadF/BadG/BcrA/BcrD ATPase family KM394_12015 PF02660 Glycerol-3-phosphate acyltransferase KM394_12020 PF00266 Aminotransferase class-V KM394_12025 PF00291 Pyridoxal-phosphate dependent enzyme KM394_12040 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM394_12040 PF00753 Metallo-beta-lactamase superfamily KM394_12055 PF00271 Helicase conserved C-terminal domain KM394_12055 PF00270 DEAD/DEAH box helicase KM394_12070 PF17932 Tetracyclin repressor-like, C-terminal domain KM394_12070 PF00440 Bacterial regulatory proteins, tetR family KM394_12085 PF02687 FtsX-like permease family KM394_12085 PF12704 MacB-like periplasmic core domain KM394_12085 PF00005 ABC transporter KM394_12090 PF03848 Tellurite resistance protein TehB KM394_12090 PF09313 Domain of unknown function (DUF1971) KM394_12100 PF08241 Methyltransferase domain KM394_12105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM394_12105 PF00205 Thiamine pyrophosphate enzyme, central domain KM394_12105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM394_12110 PF12802 MarR family KM394_12115 PF00300 Histidine phosphatase superfamily (branch 1) KM394_12120 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KM394_12150 PF07687 Peptidase dimerisation domain KM394_12150 PF01546 Peptidase family M20/M25/M40 KM394_12165 PF04542 Sigma-70 region 2 KM394_12165 PF08281 Sigma-70, region 4 KM394_12175 PF03717 Penicillin-binding Protein dimerisation domain KM394_12175 PF00905 Penicillin binding protein transpeptidase domain KM394_12190 PF01569 PAP2 superfamily KM394_12195 PF00356 Bacterial regulatory proteins, lacI family KM394_12200 PF07690 Major Facilitator Superfamily KM394_12205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM394_12205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM394_12210 PF00294 pfkB family carbohydrate kinase KM394_12215 PF00171 Aldehyde dehydrogenase family KM394_12220 PF00205 Thiamine pyrophosphate enzyme, central domain KM394_12220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM394_12220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM394_12225 PF01261 Xylose isomerase-like TIM barrel KM394_12230 PF01116 Fructose-bisphosphate aldolase class-II KM394_12235 PF04962 KduI/IolB family KM394_12260 PF18801 response regulator aspartate phosphatase H, N terminal KM394_12265 PF01381 Helix-turn-helix KM394_12280 PF02557 D-alanyl-D-alanine carboxypeptidase KM394_12290 PF01520 N-acetylmuramoyl-L-alanine amidase KM394_12290 PF00395 S-layer homology domain KM394_12300 PF00440 Bacterial regulatory proteins, tetR family KM394_12305 PF00005 ABC transporter KM394_12305 PF16326 ABC transporter C-terminal domain KM394_12315 PF00563 EAL domain KM394_12315 PF03707 Bacterial signalling protein N terminal repeat KM394_12315 PF00990 Diguanylate cyclase, GGDEF domain KM394_12320 PF13302 Acetyltransferase (GNAT) domain KM394_12335 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_12340 PF00581 Rhodanese-like domain KM394_12355 PF00005 ABC transporter KM394_12365 PF08359 YsiA-like protein, C-terminal region KM394_12365 PF00440 Bacterial regulatory proteins, tetR family KM394_12380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM394_12380 PF02770 Acyl-CoA dehydrogenase, middle domain KM394_12380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM394_12385 PF02785 Biotin carboxylase C-terminal domain KM394_12385 PF00289 Biotin carboxylase, N-terminal domain KM394_12385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM394_12390 PF00364 Biotin-requiring enzyme KM394_12395 PF00682 HMGL-like KM394_12400 PF00378 Enoyl-CoA hydratase/isomerase KM394_12405 PF01039 Carboxyl transferase domain KM394_12410 PF16177 Acetyl-coenzyme A synthetase N-terminus KM394_12410 PF00501 AMP-binding enzyme KM394_12410 PF13193 AMP-binding enzyme C-terminal domain KM394_12420 PF00583 Acetyltransferase (GNAT) family KM394_12425 PF00485 Phosphoribulokinase / Uridine kinase family KM394_12435 PF05163 DinB family KM394_12440 PF07943 Penicillin-binding protein 5, C-terminal domain KM394_12440 PF00768 D-alanyl-D-alanine carboxypeptidase KM394_12445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_12445 PF00512 His Kinase A (phospho-acceptor) domain KM394_12450 PF00072 Response regulator receiver domain KM394_12450 PF00486 Transcriptional regulatory protein, C terminal KM394_12455 PF01966 HD domain KM394_12460 PF13021 Domain of unknown function (DUF3885) KM394_12465 PF01048 Phosphorylase superfamily KM394_12505 PF17760 UvrA interaction domain KM394_12505 PF17760 UvrA interaction domain KM394_12505 PF17755 UvrA DNA-binding domain KM394_12505 PF17755 UvrA DNA-binding domain KM394_12520 PF00144 Beta-lactamase KM394_12525 PF00376 MerR family regulatory protein KM394_12525 PF09278 MerR, DNA binding KM394_12530 PF07690 Major Facilitator Superfamily KM394_12550 PF01636 Phosphotransferase enzyme family KM394_12555 PF12833 Helix-turn-helix domain KM394_12570 PF00155 Aminotransferase class I and II KM394_12570 PF00392 Bacterial regulatory proteins, gntR family KM394_12585 PF08240 Alcohol dehydrogenase GroES-like domain KM394_12585 PF00107 Zinc-binding dehydrogenase KM394_12615 PF07486 Cell Wall Hydrolase KM394_12625 PF00486 Transcriptional regulatory protein, C terminal KM394_12625 PF00072 Response regulator receiver domain KM394_12640 PF00005 ABC transporter KM394_12640 PF12848 ABC transporter KM394_12655 PF00005 ABC transporter KM394_12680 PF01842 ACT domain KM394_12680 PF00742 Homoserine dehydrogenase KM394_12680 PF03447 Homoserine dehydrogenase, NAD binding domain KM394_12685 PF00392 Bacterial regulatory proteins, gntR family KM394_12685 PF00155 Aminotransferase class I and II KM394_12690 PF07478 D-ala D-ala ligase C-terminus KM394_12690 PF01820 D-ala D-ala ligase N-terminus KM394_12695 PF03070 TENA/THI-4/PQQC family KM394_12760 PF00067 Cytochrome P450 KM394_12770 PF00132 Bacterial transferase hexapeptide (six repeats) KM394_12775 PF07561 Domain of Unknown Function (DUF1540) KM394_12785 PF00067 Cytochrome P450 KM394_12805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_12805 PF00989 PAS fold KM394_12805 PF13188 PAS domain KM394_12805 PF00512 His Kinase A (phospho-acceptor) domain KM394_12805 PF13426 PAS domain KM394_12810 PF00905 Penicillin binding protein transpeptidase domain KM394_12810 PF03717 Penicillin-binding Protein dimerisation domain KM394_12815 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM394_12820 PF01177 Asp/Glu/Hydantoin racemase KM394_12825 PF07155 ECF-type riboflavin transporter, S component KM394_12830 PF00005 ABC transporter KM394_12830 PF12558 ATP-binding cassette cobalt transporter KM394_12845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_12845 PF00512 His Kinase A (phospho-acceptor) domain KM394_12855 PF04229 GrpB protein KM394_12860 PF00107 Zinc-binding dehydrogenase KM394_12860 PF08240 Alcohol dehydrogenase GroES-like domain KM394_12865 PF03717 Penicillin-binding Protein dimerisation domain KM394_12865 PF03793 PASTA domain KM394_12865 PF00905 Penicillin binding protein transpeptidase domain KM394_12875 PF11954 Domain of unknown function (DUF3471) KM394_12875 PF00144 Beta-lactamase KM394_12910 PF01965 DJ-1/PfpI family KM394_12925 PF00144 Beta-lactamase KM394_12940 PF07690 Major Facilitator Superfamily KM394_12955 PF03009 Glycerophosphoryl diester phosphodiesterase family KM394_12975 PF00892 EamA-like transporter family KM394_12980 PF01270 Glycosyl hydrolases family 8 KM394_12990 PF00293 NUDIX domain KM394_13000 PF00144 Beta-lactamase KM394_13010 PF07690 Major Facilitator Superfamily KM394_13025 PF00293 NUDIX domain KM394_13025 PF09297 NADH pyrophosphatase zinc ribbon domain KM394_13030 PF00712 DNA polymerase III beta subunit, N-terminal domain KM394_13030 PF02767 DNA polymerase III beta subunit, central domain KM394_13030 PF02768 DNA polymerase III beta subunit, C-terminal domain KM394_13035 PF00293 NUDIX domain KM394_13050 PF12706 Beta-lactamase superfamily domain KM394_13070 PF09234 Domain of unknown function (DUF1963) KM394_13095 PF08000 Bacterial PH domain KM394_13105 PF12867 DinB superfamily KM394_13120 PF02673 Bacitracin resistance protein BacA KM394_13130 PF01541 GIY-YIG catalytic domain KM394_13170 PF01266 FAD dependent oxidoreductase KM394_13195 PF13419 Haloacid dehalogenase-like hydrolase KM394_13215 PF00282 Pyridoxal-dependent decarboxylase conserved domain KM394_13220 PF00550 Phosphopantetheine attachment site KM394_13220 PF00668 Condensation domain KM394_13220 PF13193 AMP-binding enzyme C-terminal domain KM394_13220 PF00501 AMP-binding enzyme KM394_13230 PF00128 Alpha amylase, catalytic domain KM394_13230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM394_13230 PF03714 Bacterial pullanase-associated domain KM394_13235 PF01447 Thermolysin metallopeptidase, catalytic domain KM394_13235 PF07504 Fungalysin/Thermolysin Propeptide Motif KM394_13235 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM394_13235 PF03413 Peptidase propeptide and YPEB domain KM394_13255 PF00344 SecY translocase KM394_13260 PF11638 DnaA N-terminal domain KM394_13260 PF08299 Bacterial dnaA protein helix-turn-helix KM394_13260 PF00308 Bacterial dnaA protein KM394_13265 PF00892 EamA-like transporter family KM394_13270 PF00155 Aminotransferase class I and II KM394_13270 PF00392 Bacterial regulatory proteins, gntR family KM394_13275 PF00561 alpha/beta hydrolase fold KM394_13300 PF06081 Aromatic acid exporter family member 1 KM394_13315 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM394_13320 PF14620 YpeB sporulation KM394_13320 PF03413 Peptidase propeptide and YPEB domain KM394_13325 PF07486 Cell Wall Hydrolase KM394_13325 PF01471 Putative peptidoglycan binding domain KM394_13340 PF03301 Tryptophan 2,3-dioxygenase KM394_13345 PF04199 Putative cyclase KM394_13350 PF00266 Aminotransferase class-V KM394_13355 PF00440 Bacterial regulatory proteins, tetR family KM394_13355 PF08359 YsiA-like protein, C-terminal region KM394_13360 PF00293 NUDIX domain KM394_13360 PF13344 Haloacid dehalogenase-like hydrolase KM394_13385 PF01590 GAF domain KM394_13385 PF02954 Bacterial regulatory protein, Fis family KM394_13385 PF00158 Sigma-54 interaction domain KM394_13400 PF13302 Acetyltransferase (GNAT) domain KM394_13405 PF08220 DeoR-like helix-turn-helix domain KM394_13405 PF00455 DeoR C terminal sensor domain KM394_13420 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_13420 PF00403 Heavy-metal-associated domain KM394_13420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM394_13425 PF02082 Transcriptional regulator KM394_13440 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_13440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM394_13445 PF00364 Biotin-requiring enzyme KM394_13445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM394_13445 PF02817 e3 binding domain KM394_13450 PF02779 Transketolase, pyrimidine binding domain KM394_13450 PF02780 Transketolase, C-terminal domain KM394_13455 PF00676 Dehydrogenase E1 component KM394_13465 PF00106 short chain dehydrogenase KM394_13470 PF13673 Acetyltransferase (GNAT) domain KM394_13470 PF04229 GrpB protein KM394_13500 PF00528 Binding-protein-dependent transport system inner membrane component KM394_13505 PF00005 ABC transporter KM394_13505 PF00571 CBS domain KM394_13510 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KM394_13515 PF00574 Clp protease KM394_13530 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KM394_13535 PF13673 Acetyltransferase (GNAT) domain KM394_13540 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM394_13540 PF18416 N-acetylglucosamine binding protein domain 2 KM394_13555 PF10990 Protein of unknown function (DUF2809) KM394_13580 PF03772 Competence protein KM394_13580 PF13567 Domain of unknown function (DUF4131) KM394_13580 PF00753 Metallo-beta-lactamase superfamily KM394_13630 PF13538 UvrD-like helicase C-terminal domain KM394_13645 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KM394_13650 PF00271 Helicase conserved C-terminal domain KM394_13650 PF00270 DEAD/DEAH box helicase KM394_13650 PF16124 RecQ zinc-binding KM394_13650 PF00570 HRDC domain KM394_13650 PF09382 RQC domain KM394_13690 PF01368 DHH family KM394_13690 PF02833 DHHA2 domain KM394_13695 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM394_13695 PF18416 N-acetylglucosamine binding protein domain 2 KM394_13710 PF02627 Carboxymuconolactone decarboxylase family KM394_13715 PF01235 Sodium:alanine symporter family KM394_13720 PF00171 Aldehyde dehydrogenase family KM394_13725 PF00701 Dihydrodipicolinate synthetase family KM394_13730 PF05544 Proline racemase KM394_13735 PF05544 Proline racemase KM394_13740 PF01266 FAD dependent oxidoreductase KM394_13745 PF13188 PAS domain KM394_13745 PF00158 Sigma-54 interaction domain KM394_13745 PF02954 Bacterial regulatory protein, Fis family KM394_13760 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_13760 PF04324 BFD-like [2Fe-2S] binding domain KM394_13775 PF08876 Domain of unknown function (DUF1836) KM394_13780 PF09335 SNARE associated Golgi protein KM394_13795 PF04914 DltD protein KM394_13800 PF03352 Methyladenine glycosylase KM394_13800 PF00117 Glutamine amidotransferase class-I KM394_13800 PF00958 GMP synthase C terminal domain KM394_13800 PF13673 Acetyltransferase (GNAT) domain KM394_13800 PF13302 Acetyltransferase (GNAT) domain KM394_13805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_13810 PF00877 NlpC/P60 family KM394_13810 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain KM394_13815 PF13378 Enolase C-terminal domain-like KM394_13815 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM394_13835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM394_13860 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KM394_13860 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KM394_13865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_13865 PF00512 His Kinase A (phospho-acceptor) domain KM394_13865 PF16736 Single Cache-like KM394_13865 PF00989 PAS fold KM394_13890 PF01048 Phosphorylase superfamily KM394_13900 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM394_13905 PF08439 Oligopeptidase F KM394_13905 PF01432 Peptidase family M3 KM394_13920 PF02645 Uncharacterised protein, DegV family COG1307 KM394_13940 PF07690 Major Facilitator Superfamily KM394_13950 PF04519 Polymer-forming cytoskeletal KM394_13955 PF13171 Protein of unknown function (DUF4004) KM394_13960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_13960 PF12793 Sugar transport-related sRNA regulator N-term KM394_13965 PF07690 Major Facilitator Superfamily KM394_13985 PF04226 Transglycosylase associated protein KM394_13990 PF01156 Inosine-uridine preferring nucleoside hydrolase KM394_14000 PF08241 Methyltransferase domain KM394_14035 PF00155 Aminotransferase class I and II KM394_14040 PF07977 FabA-like domain KM394_14045 PF03630 Fumble KM394_14065 PF00005 ABC transporter KM394_14110 PF01594 AI-2E family transporter KM394_14120 PF00296 Luciferase-like monooxygenase KM394_14125 PF00528 Binding-protein-dependent transport system inner membrane component KM394_14130 PF09084 NMT1/THI5 like KM394_14135 PF00005 ABC transporter KM394_14155 PF00293 NUDIX domain KM394_14155 PF09297 NADH pyrophosphatase zinc ribbon domain KM394_14175 PF02522 Aminoglycoside 3-N-acetyltransferase KM394_14200 PF13536 Putative multidrug resistance efflux transporter KM394_14205 PF12867 DinB superfamily KM394_14225 PF08713 DNA alkylation repair enzyme KM394_14235 PF01522 Polysaccharide deacetylase KM394_14245 PF03741 Integral membrane protein TerC family KM394_14250 PF00884 Sulfatase KM394_14255 PF00005 ABC transporter KM394_14255 PF12848 ABC transporter KM394_14265 PF03176 MMPL family KM394_14270 PF03176 MMPL family KM394_14275 PF03176 MMPL family KM394_14280 PF16295 Tetracyclin repressor-like, C-terminal domain KM394_14280 PF00440 Bacterial regulatory proteins, tetR family KM394_14290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM394_14295 PF01842 ACT domain KM394_14295 PF02153 Prephenate dehydrogenase KM394_14300 PF00155 Aminotransferase class I and II KM394_14305 PF01264 Chorismate synthase KM394_14310 PF00793 DAHP synthetase I family KM394_14310 PF01817 Chorismate mutase type II KM394_14330 PF01636 Phosphotransferase enzyme family KM394_14345 PF01476 LysM domain KM394_14345 PF06725 3D domain KM394_14355 PF08281 Sigma-70, region 4 KM394_14355 PF04542 Sigma-70 region 2 KM394_14375 PF06039 Malate:quinone oxidoreductase (Mqo) KM394_14380 PF13407 Periplasmic binding protein domain KM394_14385 PF02653 Branched-chain amino acid transport system / permease component KM394_14390 PF02653 Branched-chain amino acid transport system / permease component KM394_14395 PF00005 ABC transporter KM394_14400 PF00325 Bacterial regulatory proteins, crp family KM394_14400 PF04198 Putative sugar-binding domain KM394_14415 PF01791 DeoC/LacD family aldolase KM394_14435 PF03992 Antibiotic biosynthesis monooxygenase KM394_14455 PF07662 Na+ dependent nucleoside transporter C-terminus KM394_14455 PF01773 Na+ dependent nucleoside transporter N-terminus KM394_14460 PF00171 Aldehyde dehydrogenase family KM394_14465 PF00696 Amino acid kinase family KM394_14465 PF01472 PUA domain KM394_14470 PF03807 NADP oxidoreductase coenzyme F420-dependent KM394_14470 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM394_14475 PF01546 Peptidase family M20/M25/M40 KM394_14480 PF01614 Bacterial transcriptional regulator KM394_14480 PF09339 IclR helix-turn-helix domain KM394_14485 PF00324 Amino acid permease KM394_14490 PF01139 tRNA-splicing ligase RtcB KM394_14495 PF00487 Fatty acid desaturase KM394_14500 PF00245 Alkaline phosphatase KM394_14505 PF11188 Protein of unknown function (DUF2975) KM394_14510 PF13443 Cro/C1-type HTH DNA-binding domain KM394_14525 PF10086 YhfC intramembrane metalloprotease KM394_14535 PF04397 LytTr DNA-binding domain KM394_14535 PF00072 Response regulator receiver domain KM394_14545 PF13302 Acetyltransferase (GNAT) domain KM394_14550 PF12681 Glyoxalase-like domain KM394_14570 PF17863 AAA lid domain KM394_14570 PF07726 ATPase family associated with various cellular activities (AAA) KM394_14585 PF07690 Major Facilitator Superfamily KM394_14595 PF00535 Glycosyl transferase family 2 KM394_14610 PF00535 Glycosyl transferase family 2 KM394_14620 PF00535 Glycosyl transferase family 2 KM394_14630 PF00202 Aminotransferase class-III KM394_14635 PF00199 Catalase KM394_14635 PF06628 Catalase-related immune-responsive KM394_14645 PF13382 Adenine deaminase C-terminal domain KM394_14645 PF01979 Amidohydrolase family KM394_14650 PF00144 Beta-lactamase KM394_14670 PF07726 ATPase family associated with various cellular activities (AAA) KM394_14670 PF17863 AAA lid domain KM394_14680 PF00881 Nitroreductase family KM394_14685 PF01047 MarR family KM394_14690 PF03764 Elongation factor G, domain IV KM394_14690 PF00679 Elongation factor G C-terminus KM394_14690 PF00009 Elongation factor Tu GTP binding domain KM394_14690 PF14492 Elongation Factor G, domain II KM394_14700 PF00293 NUDIX domain KM394_14715 PF00005 ABC transporter KM394_14720 PF00392 Bacterial regulatory proteins, gntR family KM394_14730 PF12704 MacB-like periplasmic core domain KM394_14730 PF02687 FtsX-like permease family KM394_14730 PF00005 ABC transporter KM394_14755 PF12833 Helix-turn-helix domain KM394_14760 PF00583 Acetyltransferase (GNAT) family KM394_14775 PF00892 EamA-like transporter family KM394_14780 PF00392 Bacterial regulatory proteins, gntR family KM394_14780 PF00155 Aminotransferase class I and II KM394_14785 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KM394_14790 PF13031 Protein of unknown function (DUF3892) KM394_14800 PF00512 His Kinase A (phospho-acceptor) domain KM394_14800 PF00672 HAMP domain KM394_14805 PF00486 Transcriptional regulatory protein, C terminal KM394_14805 PF00072 Response regulator receiver domain KM394_14810 PF00561 alpha/beta hydrolase fold KM394_14840 PF01925 Sulfite exporter TauE/SafE KM394_14845 PF13302 Acetyltransferase (GNAT) domain KM394_14850 PF00324 Amino acid permease KM394_14860 PF08713 DNA alkylation repair enzyme KM394_14865 PF10898 Protein of unknown function (DUF2716) KM394_14885 PF00293 NUDIX domain KM394_14895 PF10502 Signal peptidase, peptidase S26 KM394_14910 PF02146 Sir2 family KM394_14915 PF01470 Pyroglutamyl peptidase KM394_14935 PF03746 LamB/YcsF family KM394_14940 PF02626 Carboxyltransferase domain, subdomain A and B KM394_14945 PF02682 Carboxyltransferase domain, subdomain C and D KM394_14950 PF01614 Bacterial transcriptional regulator KM394_14950 PF09339 IclR helix-turn-helix domain KM394_14955 PF10502 Signal peptidase, peptidase S26 KM394_14960 PF03932 CutC family KM394_14965 PF07454 Stage II sporulation protein P (SpoIIP) KM394_14980 PF02770 Acyl-CoA dehydrogenase, middle domain KM394_14980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM394_14980 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KM394_14995 PF07670 Nucleoside recognition KM394_15010 PF02915 Rubrerythrin KM394_15020 PF00440 Bacterial regulatory proteins, tetR family KM394_15025 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KM394_15025 PF00391 PEP-utilising enzyme, mobile domain KM394_15030 PF00753 Metallo-beta-lactamase superfamily KM394_15045 PF07875 Coat F domain KM394_15050 PF08892 YqcI/YcgG family KM394_15055 PF01810 LysE type translocator KM394_15070 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM394_15075 PF10710 Protein of unknown function (DUF2512) KM394_15080 PF11553 Protein of unknown function (DUF3231) KM394_15085 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM394_15090 PF13823 Alcohol dehydrogenase GroES-associated KM394_15090 PF08240 Alcohol dehydrogenase GroES-like domain KM394_15090 PF00107 Zinc-binding dehydrogenase KM394_15105 PF10415 Fumarase C C-terminus KM394_15105 PF00206 Lyase KM394_15110 PF00710 Asparaginase, N-terminal KM394_15110 PF17763 Glutaminase/Asparaginase C-terminal domain KM394_15115 PF01381 Helix-turn-helix KM394_15125 PF12826 Helix-hairpin-helix motif KM394_15125 PF02151 UvrB/uvrC motif KM394_15125 PF08459 UvrC Helix-hairpin-helix N-terminal KM394_15125 PF01541 GIY-YIG catalytic domain KM394_15130 PF13520 Amino acid permease KM394_15135 PF05525 Branched-chain amino acid transport protein KM394_15140 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM394_15140 PF03807 NADP oxidoreductase coenzyme F420-dependent KM394_15145 PF13564 DoxX-like family KM394_15150 PF03949 Malic enzyme, NAD binding domain KM394_15150 PF00390 Malic enzyme, N-terminal domain KM394_15165 PF03845 Spore germination protein KM394_15175 PF08664 YcbB domain KM394_15175 PF00072 Response regulator receiver domain KM394_15185 PF04960 Glutaminase KM394_15190 PF01235 Sodium:alanine symporter family KM394_15220 PF02872 5'-nucleotidase, C-terminal domain KM394_15220 PF17936 Bacterial Ig domain KM394_15220 PF00149 Calcineurin-like phosphoesterase KM394_15225 PF00199 Catalase KM394_15225 PF06628 Catalase-related immune-responsive KM394_15230 PF00561 alpha/beta hydrolase fold KM394_15235 PF00857 Isochorismatase family KM394_15255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM394_15255 PF03466 LysR substrate binding domain KM394_15260 PF01047 MarR family KM394_15280 PF11181 Heat induced stress protein YflT KM394_15295 PF03073 TspO/MBR family KM394_15300 PF03441 FAD binding domain of DNA photolyase KM394_15300 PF00875 DNA photolyase KM394_15310 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KM394_15315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM394_15315 PF00361 Proton-conducting membrane transporter KM394_15320 PF10057 Uncharacterized conserved protein (DUF2294) KM394_15335 PF01040 UbiA prenyltransferase family KM394_15340 PF00561 alpha/beta hydrolase fold KM394_15345 PF01297 Zinc-uptake complex component A periplasmic KM394_15350 PF00950 ABC 3 transport family KM394_15355 PF00005 ABC transporter KM394_15380 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM394_15385 PF01758 Sodium Bile acid symporter family KM394_15390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM394_15395 PF01022 Bacterial regulatory protein, arsR family KM394_15410 PF00012 Hsp70 protein KM394_15425 PF01037 Lrp/AsnC ligand binding domain KM394_15440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM394_15465 PF02805 Metal binding domain of Ada KM394_15465 PF12833 Helix-turn-helix domain KM394_15475 PF00144 Beta-lactamase KM394_15500 PF12802 MarR family KM394_15505 PF00667 FAD binding domain KM394_15505 PF00258 Flavodoxin KM394_15505 PF00067 Cytochrome P450 KM394_15505 PF00175 Oxidoreductase NAD-binding domain KM394_15510 PF07690 Major Facilitator Superfamily KM394_15535 PF00486 Transcriptional regulatory protein, C terminal KM394_15535 PF00072 Response regulator receiver domain KM394_15540 PF00672 HAMP domain KM394_15540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_15540 PF00512 His Kinase A (phospho-acceptor) domain KM394_15565 PF00291 Pyridoxal-phosphate dependent enzyme KM394_15585 PF01381 Helix-turn-helix KM394_15600 PF00753 Metallo-beta-lactamase superfamily KM394_15605 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM394_15615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM394_15615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM394_15620 PF04072 Leucine carboxyl methyltransferase KM394_15635 PF00005 ABC transporter KM394_15640 PF02687 FtsX-like permease family KM394_15655 PF00512 His Kinase A (phospho-acceptor) domain KM394_15655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_15655 PF00672 HAMP domain KM394_15660 PF00486 Transcriptional regulatory protein, C terminal KM394_15660 PF00072 Response regulator receiver domain KM394_15670 PF01047 MarR family KM394_15680 PF04299 Putative FMN-binding domain KM394_15685 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM394_15685 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM394_15690 PF07690 Major Facilitator Superfamily KM394_15695 PF02589 LUD domain KM394_15700 PF13183 4Fe-4S dicluster domain KM394_15700 PF11870 Domain of unknown function (DUF3390) KM394_15700 PF02589 LUD domain KM394_15705 PF02754 Cysteine-rich domain KM394_15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM394_15710 PF03466 LysR substrate binding domain KM394_15720 PF02016 LD-carboxypeptidase N-terminal domain KM394_15720 PF17676 LD-carboxypeptidase C-terminal domain KM394_15745 PF07690 Major Facilitator Superfamily KM394_15750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM394_15750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM394_15755 PF05116 Sucrose-6F-phosphate phosphohydrolase KM394_15765 PF00356 Bacterial regulatory proteins, lacI family KM394_15770 PF18801 response regulator aspartate phosphatase H, N terminal KM394_15790 PF00817 impB/mucB/samB family KM394_15790 PF11799 impB/mucB/samB family C-terminal domain KM394_15790 PF11798 IMS family HHH motif KM394_15805 PF02743 Cache domain KM394_15805 PF00672 HAMP domain KM394_15805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM394_15820 PF01554 MatE KM394_15830 PF08453 Peptidase family M9 N-terminal KM394_15830 PF18496 Collagenase G catalytic helper subdomain KM394_15830 PF01752 Collagenase KM394_15840 PF07690 Major Facilitator Superfamily KM394_15845 PF00440 Bacterial regulatory proteins, tetR family KM394_15845 PF16859 Tetracyclin repressor-like, C-terminal domain KM394_15855 PF01022 Bacterial regulatory protein, arsR family KM394_15865 PF03313 Serine dehydratase alpha chain KM394_15870 PF03315 Serine dehydratase beta chain KM394_15870 PF01842 ACT domain KM394_15880 PF00202 Aminotransferase class-III KM394_15885 PF17788 HypF Kae1-like domain KM394_15885 PF01300 Telomere recombination KM394_15885 PF07503 HypF finger KM394_15885 PF00708 Acylphosphatase KM394_15890 PF00586 AIR synthase related protein, N-terminal domain KM394_15890 PF02769 AIR synthase related protein, C-terminal domain KM394_15895 PF00857 Isochorismatase family KM394_15900 PF01037 Lrp/AsnC ligand binding domain KM394_15905 PF13520 Amino acid permease KM394_15920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM394_15920 PF01842 ACT domain KM394_15920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM394_15925 PF00266 Aminotransferase class-V KM394_15940 PF04542 Sigma-70 region 2 KM394_15940 PF08281 Sigma-70, region 4 KM394_15955 PF07883 Cupin domain KM394_15960 PF01497 Periplasmic binding protein KM394_15960 PF12833 Helix-turn-helix domain KM394_15965 PF01804 Penicillin amidase KM394_16005 PF14044 NETI protein KM394_16010 PF07690 Major Facilitator Superfamily KM394_16015 PF12697 Alpha/beta hydrolase family KM394_16020 PF01047 MarR family KM394_16025 PF07690 Major Facilitator Superfamily KM394_16035 PF12679 ABC-2 family transporter protein KM394_16040 PF00005 ABC transporter KM394_16040 PF13732 Domain of unknown function (DUF4162) KM394_16045 PF13396 Phospholipase_D-nuclease N-terminal KM394_16055 PF17314 Family of unknown function (DUF5360) KM394_16060 PF00893 Small Multidrug Resistance protein KM394_16065 PF00440 Bacterial regulatory proteins, tetR family KM394_16070 PF01289 Thiol-activated cytolysin KM394_16070 PF17440 Thiol-activated cytolysin beta sandwich domain KM394_16075 PF02667 Short chain fatty acid transporter KM394_16085 PF02525 Flavodoxin-like fold KM394_16105 PF14256 YwiC-like protein KM394_16115 PF00005 ABC transporter KM394_16120 PF02361 Cobalt transport protein KM394_16135 PF03737 Aldolase/RraA KM394_16140 PF03606 C4-dicarboxylate anaerobic carrier KM394_16145 PF04231 Endonuclease I KM394_16160 PF01381 Helix-turn-helix KM394_16165 PF02660 Glycerol-3-phosphate acyltransferase KM394_16170 PF04073 Aminoacyl-tRNA editing domain KM394_16175 PF03129 Anticodon binding domain KM394_16175 PF13393 Histidyl-tRNA synthetase KM394_16190 PF01638 HxlR-like helix-turn-helix KM394_16195 PF00881 Nitroreductase family KM394_16205 PF00391 PEP-utilising enzyme, mobile domain KM394_16205 PF00224 Pyruvate kinase, barrel domain KM394_16205 PF02887 Pyruvate kinase, alpha/beta domain KM394_16225 PF00005 ABC transporter KM394_16250 PF13419 Haloacid dehalogenase-like hydrolase KM394_16260 PF13350 Tyrosine phosphatase family KM394_16285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM394_16290 PF00480 ROK family KM394_16295 PF07690 Major Facilitator Superfamily KM394_16300 PF12464 Maltose acetyltransferase KM394_16300 PF14602 Hexapeptide repeat of succinyl-transferase KM394_16310 PF12704 MacB-like periplasmic core domain KM394_16310 PF00005 ABC transporter KM394_16310 PF02687 FtsX-like permease family KM394_16320 PF00579 tRNA synthetases class I (W and Y) KM394_16325 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM394_16325 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM394_16325 PF13288 DXP reductoisomerase C-terminal domain KM394_16330 PF01594 AI-2E family transporter KM394_16350 PF08241 Methyltransferase domain KM394_16360 PF07690 Major Facilitator Superfamily KM394_16380 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM394_16390 PF03471 Transporter associated domain KM394_16390 PF00571 CBS domain KM394_16390 PF01595 Cyclin M transmembrane N-terminal domain KM394_16395 PF13411 MerR HTH family regulatory protein KM394_16400 PF00892 EamA-like transporter family KM394_16405 PF00805 Pentapeptide repeats (8 copies) KM394_16410 PF06906 Protein of unknown function (DUF1272) KM394_16415 PF10282 Lactonase, 7-bladed beta-propeller KM394_16420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM394_16420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM394_16425 PF02447 GntP family permease KM394_16430 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM394_16435 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM394_16435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM394_16440 PF02779 Transketolase, pyrimidine binding domain KM394_16440 PF02780 Transketolase, C-terminal domain KM394_16440 PF00456 Transketolase, thiamine diphosphate binding domain KM394_16445 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM394_16445 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM394_16450 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM394_16450 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM394_16455 PF00107 Zinc-binding dehydrogenase KM394_16455 PF08240 Alcohol dehydrogenase GroES-like domain KM394_16460 PF00296 Luciferase-like monooxygenase KM394_16470 PF08659 KR domain KM394_16470 PF14765 Polyketide synthase dehydratase KM394_16470 PF00109 Beta-ketoacyl synthase, N-terminal domain KM394_16470 PF02801 Beta-ketoacyl synthase, C-terminal domain KM394_16470 PF16197 Ketoacyl-synthetase C-terminal extension KM394_16470 PF00698 Acyl transferase domain KM394_16470 PF00550 Phosphopantetheine attachment site KM394_16470 PF08240 Alcohol dehydrogenase GroES-like domain KM394_16475 PF00106 short chain dehydrogenase KM394_16480 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM394_16480 PF07504 Fungalysin/Thermolysin Propeptide Motif KM394_16480 PF01447 Thermolysin metallopeptidase, catalytic domain KM394_16480 PF03413 Peptidase propeptide and YPEB domain KM394_16500 PF00248 Aldo/keto reductase family KM394_16505 PF07690 Major Facilitator Superfamily KM394_16515 PF03928 Haem-degrading KM394_16520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM394_16550 PF03960 ArsC family KM394_16555 PF01638 HxlR-like helix-turn-helix KM394_16560 PF07702 UTRA domain KM394_16560 PF00392 Bacterial regulatory proteins, gntR family KM394_16575 PF01638 HxlR-like helix-turn-helix KM394_16580 PF01638 HxlR-like helix-turn-helix KM394_16585 PF00248 Aldo/keto reductase family KM394_16615 PF02567 Phenazine biosynthesis-like protein KM394_16635 PF00501 AMP-binding enzyme KM394_16635 PF13193 AMP-binding enzyme C-terminal domain KM394_16645 PF01638 HxlR-like helix-turn-helix KM394_16665 PF01022 Bacterial regulatory protein, arsR family KM394_16675 PF12791 Anti-sigma factor N-terminus KM394_16680 PF04542 Sigma-70 region 2 KM394_16695 PF00440 Bacterial regulatory proteins, tetR family KM394_16715 PF05656 Protein of unknown function (DUF805) KM394_16720 PF01061 ABC-2 type transporter KM394_16725 PF00005 ABC transporter KM394_16725 PF13732 Domain of unknown function (DUF4162) KM394_16740 PF03063 Prismane/CO dehydrogenase family KM394_16750 PF00753 Metallo-beta-lactamase superfamily KM394_16755 PF01183 Glycosyl hydrolases family 25 KM394_16755 PF01471 Putative peptidoglycan binding domain KM394_16780 PF00144 Beta-lactamase KM394_16820 PF00753 Metallo-beta-lactamase superfamily KM394_16825 PF08240 Alcohol dehydrogenase GroES-like domain KM394_16825 PF00107 Zinc-binding dehydrogenase KM394_16830 PF00324 Amino acid permease KM394_16835 PF07690 Major Facilitator Superfamily KM394_16860 PF02585 GlcNAc-PI de-N-acetylase KM394_16865 PF08830 Protein of unknown function (DUF1806) KM394_16870 PF03600 Citrate transporter KM394_16890 PF01497 Periplasmic binding protein KM394_16895 PF01032 FecCD transport family KM394_16900 PF01032 FecCD transport family KM394_16905 PF05675 Protein of unknown function (DUF817) KM394_16910 PF02567 Phenazine biosynthesis-like protein KM394_16915 PF13170 Protein of unknown function (DUF4003) KM394_16930 PF10901 Protein of unknown function (DUF2690) KM394_16940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM394_16940 PF03466 LysR substrate binding domain KM394_16945 PF08240 Alcohol dehydrogenase GroES-like domain KM394_16945 PF00107 Zinc-binding dehydrogenase KM394_16960 PF01713 Smr domain KM394_16960 PF00488 MutS domain V KM394_16970 PF00128 Alpha amylase, catalytic domain KM394_16970 PF09154 Domain of unknown function (DUF1939) KM394_16980 PF08439 Oligopeptidase F KM394_16980 PF01432 Peptidase family M3 KM394_16985 PF00144 Beta-lactamase KM394_16995 PF07690 Major Facilitator Superfamily KM394_17000 PF03466 LysR substrate binding domain KM394_17000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM394_17015 PF03009 Glycerophosphoryl diester phosphodiesterase family KM394_17035 PF01494 FAD binding domain KM394_17040 PF01022 Bacterial regulatory protein, arsR family KM394_17045 PF08240 Alcohol dehydrogenase GroES-like domain KM394_17045 PF00107 Zinc-binding dehydrogenase KM394_17050 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KM394_17065 PF04299 Putative FMN-binding domain KM394_17070 PF04229 GrpB protein KM394_17080 PF01758 Sodium Bile acid symporter family KM394_17085 PF02913 FAD linked oxidases, C-terminal domain KM394_17085 PF01565 FAD binding domain KM394_17105 PF00132 Bacterial transferase hexapeptide (six repeats) KM394_17110 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM394_17115 PF00535 Glycosyl transferase family 2 KM394_17120 PF00378 Enoyl-CoA hydratase/isomerase KM394_17125 PF08453 Peptidase family M9 N-terminal KM394_17125 PF01752 Collagenase KM394_17125 PF18496 Collagenase G catalytic helper subdomain KM394_17130 PF02308 MgtC family KM394_17145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM394_17150 PF04294 VanW like protein KM394_17160 PF13039 Protein of unknown function (DUF3900) KM394_17160 PF13037 Domain of unknown function (DUF3898) KM394_17180 PF00313 'Cold-shock' DNA-binding domain KM394_17190 PF00258 Flavodoxin KM394_17200 PF00293 NUDIX domain KM394_17210 PF00132 Bacterial transferase hexapeptide (six repeats) KM394_17220 PF00106 short chain dehydrogenase KM394_17230 PF00206 Lyase KM394_17230 PF14698 Argininosuccinate lyase C-terminal KM394_17240 PF01156 Inosine-uridine preferring nucleoside hydrolase KM394_17245 PF00474 Sodium:solute symporter family KM394_17255 PF00171 Aldehyde dehydrogenase family KM394_17265 PF14151 YfhD-like protein KM394_17270 PF13243 Squalene-hopene cyclase C-terminal domain KM394_17270 PF13249 Squalene-hopene cyclase N-terminal domain KM394_17275 PF02681 Divergent PAP2 family KM394_17280 PF00892 EamA-like transporter family KM394_17285 PF06961 Protein of unknown function (DUF1294) KM394_17300 PF10609 NUBPL iron-transfer P-loop NTPase KM394_17310 PF02391 MoaE protein KM394_17315 PF03454 MoeA C-terminal region (domain IV) KM394_17315 PF00994 Probable molybdopterin binding domain KM394_17315 PF03453 MoeA N-terminal region (domain I and II) KM394_17320 PF00899 ThiF family KM394_17325 PF01226 Formate/nitrite transporter KM394_17330 PF06463 Molybdenum Cofactor Synthesis C KM394_17330 PF04055 Radical SAM superfamily KM394_17335 PF02634 FdhD/NarQ family KM394_17340 PF10057 Uncharacterized conserved protein (DUF2294) KM394_17345 PF07849 Protein of unknown function (DUF1641) KM394_17350 PF01568 Molydopterin dinucleotide binding domain KM394_17350 PF00384 Molybdopterin oxidoreductase KM394_17350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM394_17350 PF00037 4Fe-4S binding domain KM394_17350 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM394_17360 PF03323 Bacillus/Clostridium GerA spore germination protein KM394_17400 PF08241 Methyltransferase domain KM394_17405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_17410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_17415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_17420 PF00375 Sodium:dicarboxylate symporter family KM394_17425 PF03816 Cell envelope-related transcriptional attenuator domain KM394_17435 PF04542 Sigma-70 region 2 KM394_17435 PF08281 Sigma-70, region 4 KM394_17455 PF00005 ABC transporter KM394_17455 PF13732 Domain of unknown function (DUF4162) KM394_17465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM394_17465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM394_17470 PF03989 DNA gyrase C-terminal domain, beta-propeller KM394_17470 PF00521 DNA gyrase/topoisomerase IV, subunit A KM394_17475 PF00204 DNA gyrase B KM394_17475 PF00986 DNA gyrase B subunit, carboxyl terminus KM394_17475 PF01751 Toprim domain KM394_17475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_17480 PF13380 CoA binding domain KM394_17485 PF13180 PDZ domain KM394_17490 PF00072 Response regulator receiver domain KM394_17490 PF00486 Transcriptional regulatory protein, C terminal KM394_17495 PF04055 Radical SAM superfamily KM394_17500 PF03477 ATP cone domain KM394_17500 PF13597 Anaerobic ribonucleoside-triphosphate reductase KM394_17505 PF02660 Glycerol-3-phosphate acyltransferase KM394_17510 PF01521 Iron-sulphur cluster biosynthesis KM394_17515 PF03061 Thioesterase superfamily KM394_17520 PF00704 Glycosyl hydrolases family 18 KM394_17520 PF01476 LysM domain KM394_17530 PF08177 Small acid-soluble spore protein N family KM394_17535 PF13040 Fur-regulated basic protein B KM394_17540 PF11490 DNA polymerase III polC-type N-terminus II KM394_17540 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM394_17540 PF01336 OB-fold nucleic acid binding domain KM394_17540 PF00929 Exonuclease KM394_17540 PF02811 PHP domain KM394_17540 PF14579 Helix-hairpin-helix motif KM394_17540 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM394_17545 PF00578 AhpC/TSA family KM394_17555 PF00664 ABC transporter transmembrane region KM394_17555 PF03412 Peptidase C39 family KM394_17555 PF00005 ABC transporter KM394_17560 PF00694 Aconitase C-terminal domain KM394_17560 PF00330 Aconitase family (aconitate hydratase) KM394_17570 PF01522 Polysaccharide deacetylase KM394_17600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM394_17600 PF01411 tRNA synthetases class II (A) KM394_17600 PF02272 DHHA1 domain KM394_17605 PF00293 NUDIX domain KM394_17605 PF13344 Haloacid dehalogenase-like hydrolase KM394_17615 PF00108 Thiolase, N-terminal domain KM394_17615 PF02803 Thiolase, C-terminal domain KM394_17620 PF13193 AMP-binding enzyme C-terminal domain KM394_17620 PF00501 AMP-binding enzyme KM394_17625 PF02632 BioY family KM394_17630 PF00501 AMP-binding enzyme KM394_17630 PF13193 AMP-binding enzyme C-terminal domain KM394_17650 PF05532 CsbD-like KM394_17680 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM394_17680 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM394_17690 PF13188 PAS domain KM394_17690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_17690 PF13426 PAS domain KM394_17690 PF00512 His Kinase A (phospho-acceptor) domain KM394_17690 PF00989 PAS fold KM394_17695 PF01738 Dienelactone hydrolase family KM394_17700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM394_17705 PF00474 Sodium:solute symporter family KM394_17710 PF01645 Conserved region in glutamate synthase KM394_17715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM394_17720 PF02559 CarD-like/TRCF domain KM394_17725 PF00491 Arginase family KM394_17730 PF01979 Amidohydrolase family KM394_17735 PF17391 Urocanase N-terminal domain KM394_17735 PF17392 Urocanase C-terminal domain KM394_17735 PF01175 Urocanase Rossmann-like domain KM394_17740 PF00221 Aromatic amino acid lyase KM394_17745 PF09021 HutP KM394_17750 PF01209 ubiE/COQ5 methyltransferase family KM394_17770 PF11084 Protein of unknown function (DUF2621) KM394_17805 PF07301 Protein of unknown function (DUF1453) KM394_17810 PF02683 Cytochrome C biogenesis protein transmembrane region KM394_17820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM394_17820 PF03466 LysR substrate binding domain KM394_17825 PF03788 LrgA family KM394_17830 PF04172 LrgB-like family KM394_17835 PF00293 NUDIX domain KM394_17835 PF13344 Haloacid dehalogenase-like hydrolase KM394_17855 PF01471 Putative peptidoglycan binding domain KM394_17855 PF01510 N-acetylmuramoyl-L-alanine amidase KM394_17870 PF00005 ABC transporter KM394_17870 PF00664 ABC transporter transmembrane region KM394_17875 PF00664 ABC transporter transmembrane region KM394_17875 PF00005 ABC transporter KM394_17880 PF03672 Uncharacterised protein family (UPF0154) KM394_17885 PF10747 Sporulation inhibitor of replication protein SirA KM394_17890 PF00456 Transketolase, thiamine diphosphate binding domain KM394_17890 PF02780 Transketolase, C-terminal domain KM394_17890 PF02779 Transketolase, pyrimidine binding domain KM394_17895 PF07282 Putative transposase DNA-binding domain KM394_17895 PF12323 Helix-turn-helix domain KM394_17895 PF01385 Probable transposase KM394_17900 PF00528 Binding-protein-dependent transport system inner membrane component KM394_17905 PF00528 Binding-protein-dependent transport system inner membrane component KM394_17910 PF00005 ABC transporter KM394_17925 PF05979 Bacterial protein of unknown function (DUF896) KM394_17930 PF00239 Resolvase, N terminal domain KM394_17935 PF00717 Peptidase S24-like KM394_17935 PF01726 LexA DNA binding domain KM394_17950 PF03551 Transcriptional regulator PadR-like family KM394_17985 PF01510 N-acetylmuramoyl-L-alanine amidase KM394_17985 PF01476 LysM domain KM394_17985 PF01471 Putative peptidoglycan binding domain KM394_17990 PF05105 Bacteriophage holin family KM394_18145 PF08281 Sigma-70, region 4 KM394_18190 PF02511 Thymidylate synthase complementing protein KM394_18195 PF00145 C-5 cytosine-specific DNA methylase KM394_18275 PF01381 Helix-turn-helix KM394_18295 PF02899 Phage integrase, N-terminal SAM-like domain KM394_18295 PF00589 Phage integrase family KM394_18300 PF03951 Glutamine synthetase, beta-Grasp domain KM394_18300 PF00120 Glutamine synthetase, catalytic domain KM394_18305 PF13411 MerR HTH family regulatory protein KM394_18310 PF06838 Methionine gamma-lyase KM394_18320 PF03458 UPF0126 domain KM394_18330 PF00004 ATPase family associated with various cellular activities (AAA) KM394_18330 PF17866 AAA lid domain KM394_18345 PF17209 Hfq protein KM394_18360 PF01476 LysM domain KM394_18360 PF06725 3D domain KM394_18365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM394_18365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM394_18370 PF00294 pfkB family carbohydrate kinase KM394_18375 PF00455 DeoR C terminal sensor domain KM394_18375 PF08220 DeoR-like helix-turn-helix domain KM394_18385 PF04238 Protein of unknown function (DUF420) KM394_18395 PF00324 Amino acid permease KM394_18400 PF00041 Fibronectin type III domain KM394_18400 PF00704 Glycosyl hydrolases family 18 KM394_18410 PF00149 Calcineurin-like phosphoesterase KM394_18410 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM394_18415 PF01226 Formate/nitrite transporter KM394_18420 PF00216 Bacterial DNA-binding protein KM394_18425 PF00403 Heavy-metal-associated domain KM394_18430 PF00403 Heavy-metal-associated domain KM394_18435 PF02583 Metal-sensitive transcriptional repressor KM394_18445 PF00756 Putative esterase KM394_18450 PF00005 ABC transporter KM394_18455 PF01032 FecCD transport family KM394_18460 PF01032 FecCD transport family KM394_18470 PF03372 Endonuclease/Exonuclease/phosphatase family KM394_18475 PF12833 Helix-turn-helix domain KM394_18475 PF02805 Metal binding domain of Ada KM394_18480 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM394_18480 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM394_18485 PF00730 HhH-GPD superfamily base excision DNA repair protein KM394_18485 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain KM394_18490 PF07687 Peptidase dimerisation domain KM394_18490 PF01546 Peptidase family M20/M25/M40 KM394_18510 PF00561 alpha/beta hydrolase fold KM394_18515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM394_18520 PF03707 Bacterial signalling protein N terminal repeat KM394_18520 PF00990 Diguanylate cyclase, GGDEF domain KM394_18520 PF00563 EAL domain KM394_18530 PF10787 Uncharacterised protein from bacillus cereus group KM394_18535 PF04172 LrgB-like family KM394_18540 PF03788 LrgA family KM394_18545 PF00155 Aminotransferase class I and II KM394_18545 PF00392 Bacterial regulatory proteins, gntR family KM394_18550 PF00364 Biotin-requiring enzyme KM394_18550 PF00561 alpha/beta hydrolase fold KM394_18555 PF02585 GlcNAc-PI de-N-acetylase KM394_18570 PF00388 Phosphatidylinositol-specific phospholipase C, X domain KM394_18575 PF00082 Subtilase family KM394_18580 PF07486 Cell Wall Hydrolase KM394_18585 PF03275 UDP-galactopyranose mutase KM394_18590 PF00884 Sulfatase KM394_18595 PF00350 Dynamin family KM394_18605 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KM394_18610 PF00512 His Kinase A (phospho-acceptor) domain KM394_18610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_18615 PF00072 Response regulator receiver domain KM394_18615 PF00486 Transcriptional regulatory protein, C terminal KM394_18630 PF00005 ABC transporter KM394_18635 PF01119 DNA mismatch repair protein, C-terminal domain KM394_18635 PF08676 MutL C terminal dimerisation domain KM394_18640 PF01624 MutS domain I KM394_18640 PF05188 MutS domain II KM394_18640 PF05192 MutS domain III KM394_18640 PF05190 MutS family domain IV KM394_18640 PF00488 MutS domain V KM394_18645 PF10628 Outer spore coat protein E (CotE) KM394_18650 PF06133 Control of competence regulator ComK, YlbF/YmcA KM394_18655 PF01938 TRAM domain KM394_18655 PF00919 Uncharacterized protein family UPF0004 KM394_18655 PF04055 Radical SAM superfamily KM394_18660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM394_18665 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KM394_18665 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KM394_18665 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KM394_18670 PF01244 Membrane dipeptidase (Peptidase family M19) KM394_18675 PF04232 Stage V sporulation protein S (SpoVS) KM394_18680 PF13277 YmdB-like protein KM394_18685 PF12072 Domain of unknown function (DUF3552) KM394_18685 PF00013 KH domain KM394_18685 PF01966 HD domain KM394_18690 PF00154 recA bacterial DNA recombination protein KM394_18700 PF18146 Damage-inducible protein CinA KH domain KM394_18700 PF00994 Probable molybdopterin binding domain KM394_18700 PF02464 Competence-damaged protein KM394_18705 PF01066 CDP-alcohol phosphatidyltransferase KM394_18710 PF13464 Domain of unknown function (DUF4115) KM394_18715 PF11868 Protein of unknown function (DUF3388) KM394_18720 PF11588 Protein of unknown function (DUF3243) KM394_18730 PF00675 Insulinase (Peptidase family M16) KM394_18730 PF05193 Peptidase M16 inactive domain KM394_18735 PF05193 Peptidase M16 inactive domain KM394_18740 PF02653 Branched-chain amino acid transport system / permease component KM394_18750 PF00005 ABC transporter KM394_18755 PF02608 ABC transporter substrate-binding protein PnrA-like KM394_18760 PF07702 UTRA domain KM394_18760 PF00392 Bacterial regulatory proteins, gntR family KM394_18765 PF17854 FtsK alpha domain KM394_18765 PF01580 FtsK/SpoIIIE family KM394_18765 PF09397 Ftsk gamma domain KM394_18770 PF14035 YlzJ-like protein KM394_18775 PF00574 Clp protease KM394_18780 PF00753 Metallo-beta-lactamase superfamily KM394_18780 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM394_18780 PF17770 Ribonuclease J C-terminal domain KM394_18785 PF00701 Dihydrodipicolinate synthetase family KM394_18790 PF00696 Amino acid kinase family KM394_18790 PF13840 ACT domain KM394_18795 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM394_18795 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM394_18800 PF02441 Flavoprotein KM394_18805 PF16924 Dipicolinate synthase subunit A N-terminal domain KM394_18805 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM394_18810 PF05239 PRC-barrel domain KM394_18815 PF00675 Insulinase (Peptidase family M16) KM394_18815 PF05193 Peptidase M16 inactive domain KM394_18820 PF01522 Polysaccharide deacetylase KM394_18825 PF00013 KH domain KM394_18825 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KM394_18825 PF01138 3' exoribonuclease family, domain 1 KM394_18825 PF03725 3' exoribonuclease family, domain 2 KM394_18825 PF00575 S1 RNA binding domain KM394_18830 PF00312 Ribosomal protein S15 KM394_18835 PF06574 FAD synthetase KM394_18835 PF01687 Riboflavin kinase KM394_18840 PF16198 tRNA pseudouridylate synthase B C-terminal domain KM394_18840 PF01509 TruB family pseudouridylate synthase (N terminal domain) KM394_18845 PF02033 Ribosome-binding factor A KM394_18850 PF04456 Protein of unknown function (DUF503) KM394_18855 PF00009 Elongation factor Tu GTP binding domain KM394_18855 PF11987 Translation-initiation factor 2 KM394_18855 PF04760 Translation initiation factor IF-2, N-terminal region KM394_18860 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM394_18865 PF04296 Protein of unknown function (DUF448) KM394_18870 PF13184 NusA-like KH domain KM394_18870 PF08529 NusA N-terminal domain KM394_18870 PF00575 S1 RNA binding domain KM394_18875 PF02576 RimP N-terminal domain KM394_18875 PF17384 RimP C-terminal SH3 domain KM394_18880 PF14480 DNA polymerase III polC-type N-terminus I KM394_18880 PF11490 DNA polymerase III polC-type N-terminus II KM394_18880 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM394_18880 PF02811 PHP domain KM394_18880 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM394_18880 PF00929 Exonuclease KM394_18880 PF14579 Helix-hairpin-helix motif KM394_18885 PF04073 Aminoacyl-tRNA editing domain KM394_18885 PF03129 Anticodon binding domain KM394_18885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM394_18890 PF17820 PDZ domain KM394_18890 PF02163 Peptidase family M50 KM394_18895 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM394_18895 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM394_18895 PF13288 DXP reductoisomerase C-terminal domain KM394_18905 PF01255 Putative undecaprenyl diphosphate synthase KM394_18910 PF01765 Ribosome recycling factor KM394_18915 PF00696 Amino acid kinase family KM394_18920 PF00889 Elongation factor TS KM394_18925 PF00318 Ribosomal protein S2 KM394_18930 PF06018 CodY GAF-like domain KM394_18930 PF08222 CodY helix-turn-helix domain KM394_18935 PF00004 ATPase family associated with various cellular activities (AAA) KM394_18935 PF07724 AAA domain (Cdc48 subfamily) KM394_18935 PF10431 C-terminal, D2-small domain, of ClpB protein KM394_18940 PF00227 Proteasome subunit KM394_18945 PF02899 Phage integrase, N-terminal SAM-like domain KM394_18945 PF00589 Phage integrase family KM394_18950 PF01134 Glucose inhibited division protein A KM394_18955 PF01131 DNA topoisomerase KM394_18955 PF01751 Toprim domain KM394_18955 PF01396 Topoisomerase DNA binding C4 zinc finger KM394_18965 PF02629 CoA binding domain KM394_18965 PF00549 CoA-ligase KM394_18970 PF08442 ATP-grasp domain KM394_18970 PF00549 CoA-ligase KM394_18975 PF01351 Ribonuclease HII KM394_18980 PF01926 50S ribosome-binding GTPase KM394_18985 PF10502 Signal peptidase, peptidase S26 KM394_18990 PF01245 Ribosomal protein L19 KM394_18995 PF01746 tRNA (Guanine-1)-methyltransferase KM394_19000 PF01782 RimM N-terminal domain KM394_19000 PF05239 PRC-barrel domain KM394_19010 PF00886 Ribosomal protein S16 KM394_19015 PF00448 SRP54-type protein, GTPase domain KM394_19015 PF02881 SRP54-type protein, helical bundle domain KM394_19015 PF02978 Signal peptide binding domain KM394_19020 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KM394_19025 PF00448 SRP54-type protein, GTPase domain KM394_19025 PF02881 SRP54-type protein, helical bundle domain KM394_19030 PF06470 SMC proteins Flexible Hinge Domain KM394_19030 PF02463 RecF/RecN/SMC N terminal domain KM394_19035 PF00035 Double-stranded RNA binding motif KM394_19035 PF14622 Ribonuclease-III-like KM394_19040 PF00550 Phosphopantetheine attachment site KM394_19050 PF00698 Acyl transferase domain KM394_19055 PF02504 Fatty acid synthesis protein KM394_19060 PF03061 Thioesterase superfamily KM394_19065 PF00270 DEAD/DEAH box helicase KM394_19065 PF00271 Helicase conserved C-terminal domain KM394_19065 PF17191 RecG wedge domain KM394_19070 PF13684 Dihydroxyacetone kinase family KM394_19070 PF02734 DAK2 domain KM394_19075 PF03780 Asp23 family, cell envelope-related function KM394_19080 PF00830 Ribosomal L28 family KM394_19085 PF08183 Stage V sporulation protein family KM394_19090 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KM394_19090 PF04263 Thiamin pyrophosphokinase, catalytic domain KM394_19095 PF00834 Ribulose-phosphate 3 epimerase family KM394_19100 PF03193 RsgA GTPase KM394_19100 PF16745 RsgA N-terminal domain KM394_19105 PF00069 Protein kinase domain KM394_19105 PF03793 PASTA domain KM394_19115 PF04055 Radical SAM superfamily KM394_19120 PF01189 16S rRNA methyltransferase RsmB/F KM394_19120 PF01029 NusB family KM394_19125 PF02911 Formyl transferase, C-terminal domain KM394_19125 PF00551 Formyl transferase KM394_19130 PF01327 Polypeptide deformylase KM394_19135 PF00271 Helicase conserved C-terminal domain KM394_19135 PF18074 Primosomal protein N C-terminal domain KM394_19135 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KM394_19135 PF04851 Type III restriction enzyme, res subunit KM394_19135 PF17764 3′ DNA-binding domain (3′BD) KM394_19140 PF04127 DNA / pantothenate metabolism flavoprotein KM394_19140 PF02441 Flavoprotein KM394_19145 PF01192 RNA polymerase Rpb6 KM394_19150 PF00625 Guanylate kinase KM394_19155 PF04025 Domain of unknown function (DUF370) KM394_19160 PF03755 YicC-like family, N-terminal region KM394_19160 PF08340 Domain of unknown function (DUF1732) KM394_19165 PF00690 Cation transporter/ATPase, N-terminus KM394_19165 PF00689 Cation transporting ATPase, C-terminus KM394_19170 PF05670 NFACT protein RNA binding domain KM394_19175 PF01321 Creatinase/Prolidase N-terminal domain KM394_19175 PF00557 Metallopeptidase family M24 KM394_19205 PF00156 Phosphoribosyl transferase domain KM394_19210 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KM394_19215 PF01180 Dihydroorotate dehydrogenase KM394_19220 PF00175 Oxidoreductase NAD-binding domain KM394_19220 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KM394_19225 PF02142 MGS-like domain KM394_19225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM394_19225 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KM394_19230 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KM394_19230 PF00117 Glutamine amidotransferase class-I KM394_19235 PF01979 Amidohydrolase family KM394_19240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM394_19240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM394_19245 PF00860 Permease family KM394_19250 PF00156 Phosphoribosyl transferase domain KM394_19255 PF00849 RNA pseudouridylate synthase KM394_19255 PF01479 S4 domain KM394_19260 PF01252 Signal peptidase (SPase) II KM394_19270 PF08264 Anticodon-binding domain of tRNA KM394_19270 PF00133 tRNA synthetases class I (I, L, M and V) KM394_19270 PF06827 Zinc finger found in FPG and IleRS KM394_19275 PF05103 DivIVA protein KM394_19280 PF17774 Putative RNA-binding domain in YlmH KM394_19280 PF01479 S4 domain KM394_19285 PF02325 YGGT family KM394_19290 PF04472 Cell division protein SepF KM394_19295 PF01168 Alanine racemase, N-terminal domain KM394_19300 PF02578 Multi-copper polyphenol oxidoreductase laccase KM394_19305 PF05239 PRC-barrel domain KM394_19310 PF04542 Sigma-70 region 2 KM394_19310 PF04539 Sigma-70 region 3 KM394_19310 PF04545 Sigma-70, region 4 KM394_19315 PF04542 Sigma-70 region 2 KM394_19315 PF04545 Sigma-70, region 4 KM394_19320 PF03419 Sporulation factor SpoIIGA KM394_19325 PF12327 FtsZ family, C-terminal domain KM394_19325 PF00091 Tubulin/FtsZ family, GTPase domain KM394_19330 PF02491 SHS2 domain inserted in FTSA KM394_19335 PF03799 Cell division protein FtsQ KM394_19335 PF08478 POTRA domain, FtsQ-type KM394_19340 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM394_19340 PF01565 FAD binding domain KM394_19345 PF04101 Glycosyltransferase family 28 C-terminal domain KM394_19345 PF03033 Glycosyltransferase family 28 N-terminal domain KM394_19350 PF01098 Cell cycle protein KM394_19355 PF02875 Mur ligase family, glutamate ligase domain KM394_19355 PF08245 Mur ligase middle domain KM394_19360 PF00953 Glycosyl transferase family 4 KM394_19360 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KM394_19365 PF08245 Mur ligase middle domain KM394_19365 PF01225 Mur ligase family, catalytic domain KM394_19365 PF02875 Mur ligase family, glutamate ligase domain KM394_19370 PF03793 PASTA domain KM394_19370 PF03717 Penicillin-binding Protein dimerisation domain KM394_19370 PF00905 Penicillin binding protein transpeptidase domain KM394_19375 PF00905 Penicillin binding protein transpeptidase domain KM394_19375 PF03717 Penicillin-binding Protein dimerisation domain KM394_19375 PF03793 PASTA domain KM394_19380 PF04977 Septum formation initiator KM394_19385 PF01795 MraW methylase family KM394_19390 PF10079 Bacillithiol biosynthesis BshC KM394_19395 PF02558 Ketopantoate reductase PanE/ApbA KM394_19395 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM394_19400 PF00583 Acetyltransferase (GNAT) family KM394_19410 PF01783 Ribosomal L32p protein family KM394_19415 PF02620 Large ribosomal RNA subunit accumulation protein YceD KM394_19460 PF12123 N-acetylmuramoyl-l-alanine amidase KM394_19460 PF01510 N-acetylmuramoyl-L-alanine amidase KM394_19465 PF05105 Bacteriophage holin family KM394_19540 PF00574 Clp protease KM394_19550 PF03354 Phage Terminase KM394_19570 PF10137 Predicted nucleotide-binding protein containing TIR-like domain KM394_19575 PF00589 Phage integrase family KM394_19625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM394_19640 PF00692 dUTPase KM394_19655 PF04542 Sigma-70 region 2 KM394_19655 PF04539 Sigma-70 region 3 KM394_19655 PF04545 Sigma-70, region 4 KM394_19680 PF07319 Primosomal protein DnaI N-terminus KM394_19680 PF01695 IstB-like ATP binding protein KM394_19710 PF01381 Helix-turn-helix KM394_19725 PF01381 Helix-turn-helix KM394_19740 PF00589 Phage integrase family KM394_19740 PF14659 Phage integrase, N-terminal SAM-like domain KM394_19745 PF05636 HIGH Nucleotidyl Transferase KM394_19750 PF05362 Lon protease (S16) C-terminal proteolytic domain KM394_19750 PF13180 PDZ domain KM394_19755 PF01734 Patatin-like phospholipase KM394_19760 PF07670 Nucleoside recognition KM394_19765 PF01467 Cytidylyltransferase-like KM394_19780 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KM394_19785 PF06133 Control of competence regulator ComK, YlbF/YmcA KM394_19790 PF00300 Histidine phosphatase superfamily (branch 1) KM394_19795 PF14003 YlbE-like protein KM394_19800 PF14071 Putative coat protein KM394_19805 PF00188 Cysteine-rich secretory protein family KM394_19805 PF14504 CAP-associated N-terminal KM394_19810 PF08868 YugN-like family KM394_19815 PF00795 Carbon-nitrogen hydrolase KM394_19820 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KM394_19825 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KM394_19830 PF00510 Cytochrome c oxidase subunit III KM394_19835 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM394_19840 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM394_19840 PF00034 Cytochrome c KM394_19840 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KM394_19845 PF01040 UbiA prenyltransferase family KM394_19850 PF02628 Cytochrome oxidase assembly protein KM394_19855 PF02436 Conserved carboxylase domain KM394_19855 PF00682 HMGL-like KM394_19855 PF00289 Biotin carboxylase, N-terminal domain KM394_19855 PF00364 Biotin-requiring enzyme KM394_19855 PF02785 Biotin carboxylase C-terminal domain KM394_19855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM394_19860 PF01098 Cell cycle protein KM394_19865 PF07408 Protein of unknown function (DUF1507) KM394_19875 PF02562 PhoH-like protein KM394_19875 PF13638 PIN domain KM394_19885 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KM394_19895 PF14036 YlaH-like protein KM394_19900 PF03144 Elongation factor Tu domain 2 KM394_19900 PF00679 Elongation factor G C-terminus KM394_19900 PF14492 Elongation Factor G, domain II KM394_19900 PF00009 Elongation factor Tu GTP binding domain KM394_19910 PF00459 Inositol monophosphatase family KM394_19920 PF06335 Protein of unknown function (DUF1054) KM394_19925 PF05256 Uncharacterised protein family (UPF0223) KM394_19930 PF01276 Orn/Lys/Arg decarboxylase, major domain KM394_19930 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM394_19970 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_19970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM394_19975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM394_19975 PF02817 e3 binding domain KM394_19975 PF00364 Biotin-requiring enzyme KM394_19980 PF02779 Transketolase, pyrimidine binding domain KM394_19980 PF02780 Transketolase, C-terminal domain KM394_19985 PF00676 Dehydrogenase E1 component KM394_19995 PF01327 Polypeptide deformylase KM394_20005 PF07288 Protein of unknown function (DUF1447) KM394_20010 PF00753 Metallo-beta-lactamase superfamily KM394_20010 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM394_20010 PF17770 Ribonuclease J C-terminal domain KM394_20015 PF02254 TrkA-N domain KM394_20015 PF02080 TrkA-C domain KM394_20025 PF07687 Peptidase dimerisation domain KM394_20025 PF01546 Peptidase family M20/M25/M40 KM394_20030 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KM394_20030 PF00132 Bacterial transferase hexapeptide (six repeats) KM394_20030 PF14602 Hexapeptide repeat of succinyl-transferase KM394_20035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM394_20035 PF03466 LysR substrate binding domain KM394_20050 PF04308 Ribonuclease H-like KM394_20060 PF08796 Protein of unknown function (DUF1797) KM394_20075 PF10388 EAL-domain associated signalling protein domain KM394_20075 PF00563 EAL domain KM394_20085 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM394_20085 PF00149 Calcineurin-like phosphoesterase KM394_20095 PF02503 Polyphosphate kinase middle domain KM394_20095 PF13090 Polyphosphate kinase C-terminal domain 2 KM394_20095 PF17941 Polyphosphate kinase C-terminal domain 1 KM394_20095 PF13089 Polyphosphate kinase N-terminal domain KM394_20100 PF02541 Ppx/GppA phosphatase family KM394_20105 PF14177 YkyB-like protein KM394_20130 PF07690 Major Facilitator Superfamily KM394_20140 PF08267 Cobalamin-independent synthase, N-terminal domain KM394_20140 PF01717 Cobalamin-independent synthase, Catalytic domain KM394_20150 PF14040 Deoxyribonuclease NucA/NucB KM394_20160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_20160 PF00512 His Kinase A (phospho-acceptor) domain KM394_20170 PF00155 Aminotransferase class I and II KM394_20175 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM394_20175 PF00356 Bacterial regulatory proteins, lacI family KM394_20180 PF00528 Binding-protein-dependent transport system inner membrane component KM394_20185 PF00528 Binding-protein-dependent transport system inner membrane component KM394_20190 PF13416 Bacterial extracellular solute-binding protein KM394_20195 PF00128 Alpha amylase, catalytic domain KM394_20195 PF16657 Maltogenic Amylase, C-terminal domain KM394_20195 PF02903 Alpha amylase, N-terminal ig-like domain KM394_20200 PF00128 Alpha amylase, catalytic domain KM394_20200 PF16657 Maltogenic Amylase, C-terminal domain KM394_20205 PF03459 TOBE domain KM394_20205 PF17912 MalK OB fold domain KM394_20205 PF00005 ABC transporter KM394_20245 PF02803 Thiolase, C-terminal domain KM394_20245 PF00108 Thiolase, N-terminal domain KM394_20250 PF00293 NUDIX domain KM394_20280 PF03551 Transcriptional regulator PadR-like family KM394_20295 PF01008 Initiation factor 2 subunit family KM394_20300 PF01636 Phosphotransferase enzyme family KM394_20305 PF00795 Carbon-nitrogen hydrolase KM394_20310 PF00155 Aminotransferase class I and II KM394_20315 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KM394_20315 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KM394_20325 PF00596 Class II Aldolase and Adducin N-terminal domain KM394_20330 PF03079 ARD/ARD' family KM394_20350 PF08448 PAS fold KM394_20350 PF00990 Diguanylate cyclase, GGDEF domain KM394_20355 PF00881 Nitroreductase family KM394_20370 PF02896 PEP-utilising enzyme, TIM barrel domain KM394_20370 PF00391 PEP-utilising enzyme, mobile domain KM394_20370 PF05524 PEP-utilising enzyme, N-terminal KM394_20375 PF00381 PTS HPr component phosphorylation site KM394_20380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM394_20380 PF00367 phosphotransferase system, EIIB KM394_20380 PF02378 Phosphotransferase system, EIIC KM394_20385 PF03123 CAT RNA binding domain KM394_20385 PF00874 PRD domain KM394_20395 PF00392 Bacterial regulatory proteins, gntR family KM394_20395 PF07702 UTRA domain KM394_20400 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KM394_20405 PF01979 Amidohydrolase family KM394_20415 PF04079 Segregation and condensation complex subunit ScpB KM394_20420 PF02616 Segregation and condensation protein ScpA KM394_20430 PF03745 Domain of unknown function (DUF309) KM394_20435 PF00583 Acetyltransferase (GNAT) family KM394_20440 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KM394_20445 PF06207 Protein of unknown function (DUF1002) KM394_20455 PF03323 Bacillus/Clostridium GerA spore germination protein KM394_20460 PF14097 Stage V sporulation protein AE1 KM394_20465 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM394_20470 PF07451 Stage V sporulation protein AD (SpoVAD) KM394_20475 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM394_20480 PF13782 Stage V sporulation protein AB KM394_20485 PF12164 Stage V sporulation protein AA KM394_20495 PF00209 Sodium:neurotransmitter symporter family KM394_20500 PF04542 Sigma-70 region 2 KM394_20500 PF04539 Sigma-70 region 3 KM394_20500 PF04545 Sigma-70, region 4 KM394_20505 PF13581 Histidine kinase-like ATPase domain KM394_20510 PF01740 STAS domain KM394_20515 PF07943 Penicillin-binding protein 5, C-terminal domain KM394_20515 PF00768 D-alanyl-D-alanine carboxypeptidase KM394_20520 PF00392 Bacterial regulatory proteins, gntR family KM394_20525 PF00005 ABC transporter KM394_20540 PF01047 MarR family KM394_20550 PF00860 Permease family KM394_20555 PF01544 CorA-like Mg2+ transporter protein KM394_20560 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM394_20560 PF02885 Glycosyl transferase family, helical bundle domain KM394_20560 PF00591 Glycosyl transferase family, a/b domain KM394_20565 PF01048 Phosphorylase superfamily KM394_20570 PF01676 Metalloenzyme superfamily KM394_20580 PF02899 Phage integrase, N-terminal SAM-like domain KM394_20580 PF00589 Phage integrase family KM394_20585 PF14004 Protein of unknown function (DUF4227) KM394_20590 PF01475 Ferric uptake regulator family KM394_20595 PF01944 Stage II sporulation protein M KM394_20605 PF00293 NUDIX domain KM394_20610 PF13072 Mother cell inhibitor of FtsZ KM394_20615 PF00248 Aldo/keto reductase family KM394_20620 PF00248 Aldo/keto reductase family KM394_20625 PF13673 Acetyltransferase (GNAT) domain KM394_20625 PF04229 GrpB protein KM394_20635 PF02872 5'-nucleotidase, C-terminal domain KM394_20635 PF00149 Calcineurin-like phosphoesterase KM394_20635 PF00565 Staphylococcal nuclease homologue KM394_20635 PF00746 LPXTG cell wall anchor motif KM394_20645 PF12146 Serine aminopeptidase, S33 KM394_20650 PF13726 Na+-H+ antiporter family KM394_20650 PF03553 Na+/H+ antiporter family KM394_20655 PF00356 Bacterial regulatory proteins, lacI family KM394_20660 PF00583 Acetyltransferase (GNAT) family KM394_20665 PF12146 Serine aminopeptidase, S33 KM394_20670 PF10827 Protein of unknown function (DUF2552) KM394_20680 PF01872 RibD C-terminal domain KM394_20680 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM394_20685 PF00677 Lumazine binding domain KM394_20690 PF00925 GTP cyclohydrolase II KM394_20690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KM394_20695 PF00885 6,7-dimethyl-8-ribityllumazine synthase KM394_20705 PF06968 Biotin and Thiamin Synthesis associated domain KM394_20705 PF04055 Radical SAM superfamily KM394_20710 PF13847 Methyltransferase domain KM394_20715 PF12697 Alpha/beta hydrolase family KM394_20715 PF08241 Methyltransferase domain KM394_20720 PF00155 Aminotransferase class I and II KM394_20730 PF00202 Aminotransferase class-III KM394_20740 PF03553 Na+/H+ antiporter family KM394_20745 PF00149 Calcineurin-like phosphoesterase KM394_20745 PF02872 5'-nucleotidase, C-terminal domain KM394_20755 PF01037 Lrp/AsnC ligand binding domain KM394_20755 PF13404 AsnC-type helix-turn-helix domain KM394_20770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM394_20770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM394_20775 PF00202 Aminotransferase class-III KM394_20780 PF00696 Amino acid kinase family KM394_20785 PF01960 ArgJ family KM394_20790 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM394_20790 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM394_20800 PF00106 short chain dehydrogenase KM394_20810 PF03807 NADP oxidoreductase coenzyme F420-dependent KM394_20810 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM394_20815 PF03313 Serine dehydratase alpha chain KM394_20820 PF01842 ACT domain KM394_20820 PF03315 Serine dehydratase beta chain KM394_20830 PF00753 Metallo-beta-lactamase superfamily KM394_20830 PF12706 Beta-lactamase superfamily domain KM394_20850 PF01546 Peptidase family M20/M25/M40 KM394_20850 PF07687 Peptidase dimerisation domain KM394_20855 PF13302 Acetyltransferase (GNAT) domain KM394_20870 PF03734 L,D-transpeptidase catalytic domain KM394_20875 PF06081 Aromatic acid exporter family member 1 KM394_20875 PF11728 Putative aromatic acid exporter C-terminal domain KM394_20880 PF00005 ABC transporter KM394_20885 PF00528 Binding-protein-dependent transport system inner membrane component KM394_20890 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM394_20895 PF06491 Disulphide isomerase KM394_20900 PF11208 Protein of unknown function (DUF2992) KM394_20910 PF01098 Cell cycle protein KM394_20915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM394_20915 PF00364 Biotin-requiring enzyme KM394_20915 PF02817 e3 binding domain KM394_20920 PF02779 Transketolase, pyrimidine binding domain KM394_20920 PF02780 Transketolase, C-terminal domain KM394_20925 PF00676 Dehydrogenase E1 component KM394_20930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM394_20930 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_20935 PF00871 Acetokinase family KM394_20940 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM394_20940 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM394_20945 PF01515 Phosphate acetyl/butaryl transferase KM394_20950 PF00989 PAS fold KM394_20950 PF02954 Bacterial regulatory protein, Fis family KM394_20950 PF00158 Sigma-54 interaction domain KM394_20960 PF03009 Glycerophosphoryl diester phosphodiesterase family KM394_20965 PF14174 YycC-like protein KM394_20975 PF00072 Response regulator receiver domain KM394_20975 PF08769 Sporulation initiation factor Spo0A C terminal KM394_20980 PF17820 PDZ domain KM394_20980 PF05580 SpoIVB peptidase S55 KM394_20985 PF13476 AAA domain KM394_20990 PF02863 Arginine repressor, C-terminal domain KM394_20990 PF01316 Arginine repressor, DNA binding domain KM394_20995 PF01479 S4 domain KM394_20995 PF01728 FtsJ-like methyltransferase KM394_21000 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KM394_21000 PF02780 Transketolase, C-terminal domain KM394_21000 PF02779 Transketolase, pyrimidine binding domain KM394_21005 PF00348 Polyprenyl synthetase KM394_21010 PF02609 Exonuclease VII small subunit KM394_21015 PF02601 Exonuclease VII, large subunit KM394_21015 PF13742 OB-fold nucleic acid binding domain KM394_21020 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KM394_21020 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KM394_21025 PF01029 NusB family KM394_21030 PF03780 Asp23 family, cell envelope-related function KM394_21035 PF00289 Biotin carboxylase, N-terminal domain KM394_21035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM394_21035 PF02785 Biotin carboxylase C-terminal domain KM394_21040 PF00364 Biotin-requiring enzyme KM394_21050 PF12685 SpoIIIAH-like protein KM394_21060 PF09581 Stage III sporulation protein AF (Spore_III_AF) KM394_21065 PF09546 Stage III sporulation protein AE (spore_III_AE) KM394_21070 PF06686 Stage III sporulation protein AC/AD protein family KM394_21075 PF06686 Stage III sporulation protein AC/AD protein family KM394_21080 PF09548 Stage III sporulation protein AB (spore_III_AB) KM394_21105 PF01132 Elongation factor P (EF-P) OB domain KM394_21105 PF08207 Elongation factor P (EF-P) KOW-like domain KM394_21105 PF09285 Elongation factor P, C-terminal KM394_21110 PF01321 Creatinase/Prolidase N-terminal domain KM394_21110 PF00557 Metallopeptidase family M24 KM394_21115 PF01220 Dehydroquinase class II KM394_21120 PF11085 Conserved membrane protein YqhR KM394_21125 PF07136 Protein of unknown function (DUF1385) KM394_21135 PF13419 Haloacid dehalogenase-like hydrolase KM394_21140 PF02742 Iron dependent repressor, metal binding and dimerisation domain KM394_21140 PF01325 Iron dependent repressor, N-terminal DNA binding domain KM394_21155 PF03099 Biotin/lipoate A/B protein ligase family KM394_21160 PF00581 Rhodanese-like domain KM394_21165 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM394_21165 PF00356 Bacterial regulatory proteins, lacI family KM394_21175 PF00893 Small Multidrug Resistance protein KM394_21180 PF00893 Small Multidrug Resistance protein KM394_21215 PF00005 ABC transporter KM394_21220 PF00392 Bacterial regulatory proteins, gntR family KM394_21235 PF02347 Glycine cleavage system P-protein KM394_21240 PF02347 Glycine cleavage system P-protein KM394_21245 PF01571 Aminomethyltransferase folate-binding domain KM394_21245 PF08669 Glycine cleavage T-protein C-terminal barrel domain KM394_21250 PF00271 Helicase conserved C-terminal domain KM394_21250 PF00176 SNF2 family N-terminal domain KM394_21255 PF11079 Bacterial protein YqhG of unknown function KM394_21275 PF14038 YqzE-like protein KM394_21280 PF01202 Shikimate kinase KM394_21305 PF07963 Prokaryotic N-terminal methylation motif KM394_21315 PF00482 Type II secretion system (T2SS), protein F KM394_21320 PF00437 Type II/IV secretion system protein KM394_21330 PF11117 Protein of unknown function (DUF2626) KM394_21335 PF00375 Sodium:dicarboxylate symporter family KM394_21370 PF03033 Glycosyltransferase family 28 N-terminal domain KM394_21370 PF04101 Glycosyltransferase family 28 C-terminal domain KM394_21375 PF00809 Pterin binding enzyme KM394_21375 PF02965 Vitamin B12 dependent methionine synthase, activation domain KM394_21375 PF02607 B12 binding domain KM394_21375 PF02310 B12 binding domain KM394_21375 PF02574 Homocysteine S-methyltransferase KM394_21380 PF02574 Homocysteine S-methyltransferase KM394_21380 PF02219 Methylenetetrahydrofolate reductase KM394_21385 PF01053 Cys/Met metabolism PLP-dependent enzyme KM394_21390 PF01053 Cys/Met metabolism PLP-dependent enzyme KM394_21400 PF01022 Bacterial regulatory protein, arsR family KM394_21410 PF00753 Metallo-beta-lactamase superfamily KM394_21415 PF10958 Protein of unknown function (DUF2759) KM394_21420 PF00480 ROK family KM394_21425 PF06014 Bacterial protein of unknown function (DUF910) KM394_21430 PF01812 5-formyltetrahydrofolate cyclo-ligase family KM394_21435 PF00471 Ribosomal protein L33 KM394_21440 PF00483 Nucleotidyl transferase KM394_21445 PF01895 PhoU domain KM394_21450 PF00005 ABC transporter KM394_21455 PF00528 Binding-protein-dependent transport system inner membrane component KM394_21460 PF00528 Binding-protein-dependent transport system inner membrane component KM394_21465 PF12849 PBP superfamily domain KM394_21470 PF03717 Penicillin-binding Protein dimerisation domain KM394_21470 PF00905 Penicillin binding protein transpeptidase domain KM394_21475 PF07690 Major Facilitator Superfamily KM394_21480 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM394_21480 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM394_21500 PF04551 GcpE protein KM394_21505 PF01475 Ferric uptake regulator family KM394_21510 PF00950 ABC 3 transport family KM394_21515 PF00005 ABC transporter KM394_21520 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM394_21520 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM394_21525 PF11116 Protein of unknown function (DUF2624) KM394_21530 PF01261 Xylose isomerase-like TIM barrel KM394_21535 PF00270 DEAD/DEAH box helicase KM394_21535 PF00271 Helicase conserved C-terminal domain KM394_21545 PF02401 LytB protein KM394_21550 PF01784 NIF3 (NGG1p interacting factor 3) KM394_21555 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KM394_21560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM394_21565 PF04539 Sigma-70 region 3 KM394_21565 PF00140 Sigma-70 factor, region 1.2 KM394_21565 PF04545 Sigma-70, region 4 KM394_21565 PF04542 Sigma-70 region 2 KM394_21565 PF03979 Sigma-70 factor, region 1.1 KM394_21570 PF01807 CHC2 zinc finger KM394_21570 PF10410 DnaB-helicase binding domain of primase KM394_21570 PF08275 DNA primase catalytic core, N-terminal domain KM394_21580 PF03618 Kinase/pyrophosphorylase KM394_21585 PF00571 CBS domain KM394_21585 PF08279 HTH domain KM394_21590 PF11967 Recombination protein O N terminal KM394_21590 PF02565 Recombination protein O C terminal KM394_21600 PF01926 50S ribosome-binding GTPase KM394_21600 PF07650 KH domain KM394_21605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM394_21610 PF01219 Prokaryotic diacylglycerol kinase KM394_21615 PF02130 Uncharacterized protein family UPF0054 KM394_21620 PF07697 7TM-HD extracellular KM394_21620 PF01966 HD domain KM394_21620 PF07698 7TM receptor with intracellular HD hydrolase KM394_21625 PF02562 PhoH-like protein KM394_21630 PF06898 Putative stage IV sporulation protein YqfD KM394_21635 PF07873 YabP family KM394_21640 PF09424 Yqey-like protein KM394_21645 PF01165 Ribosomal protein S21 KM394_21650 PF04055 Radical SAM superfamily KM394_21650 PF01938 TRAM domain KM394_21650 PF00919 Uncharacterized protein family UPF0004 KM394_21655 PF04452 RNA methyltransferase KM394_21665 PF00226 DnaJ domain KM394_21665 PF01556 DnaJ C terminal domain KM394_21665 PF00684 DnaJ central domain KM394_21670 PF00012 Hsp70 protein KM394_21675 PF01025 GrpE KM394_21680 PF01628 HrcA protein C terminal domain KM394_21685 PF06969 HemN C-terminal domain KM394_21685 PF04055 Radical SAM superfamily KM394_21690 PF01638 HxlR-like helix-turn-helix KM394_21695 PF00679 Elongation factor G C-terminus KM394_21695 PF00009 Elongation factor Tu GTP binding domain KM394_21695 PF03144 Elongation factor Tu domain 2 KM394_21695 PF06421 GTP-binding protein LepA C-terminus KM394_21705 PF03418 Germination protease KM394_21710 PF01649 Ribosomal protein S20 KM394_21715 PF06144 DNA polymerase III, delta subunit KM394_21720 PF14141 YqzM-like protein KM394_21725 PF13567 Domain of unknown function (DUF4131) KM394_21725 PF00753 Metallo-beta-lactamase superfamily KM394_21725 PF03772 Competence protein KM394_21730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM394_21735 PF10531 SLBB domain KM394_21740 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM394_21740 PF03807 NADP oxidoreductase coenzyme F420-dependent KM394_21745 PF13649 Methyltransferase domain KM394_21755 PF01966 HD domain KM394_21760 PF01467 Cytidylyltransferase-like KM394_21765 PF01985 CRS1 / YhbY (CRM) domain KM394_21770 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KM394_21770 PF01488 Shikimate / quinate 5-dehydrogenase KM394_21770 PF08501 Shikimate dehydrogenase substrate binding domain KM394_21775 PF01926 50S ribosome-binding GTPase KM394_21790 PF02666 Phosphatidylserine decarboxylase KM394_21795 PF04542 Sigma-70 region 2 KM394_21795 PF04545 Sigma-70, region 4 KM394_21805 PF16244 Domain of unknown function (DUF4901) KM394_21810 PF00471 Ribosomal protein L33 KM394_21815 PF00881 Nitroreductase family KM394_21820 PF04607 Region found in RelA / SpoT proteins KM394_21830 PF00245 Alkaline phosphatase KM394_21840 PF00561 alpha/beta hydrolase fold KM394_21840 PF08386 TAP-like protein KM394_21875 PF13860 FlgD Ig-like domain KM394_21875 PF05922 Peptidase inhibitor I9 KM394_21875 PF02225 PA domain KM394_21875 PF00082 Subtilase family KM394_21880 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KM394_21895 PF07681 DoxX KM394_21925 PF00005 ABC transporter KM394_21930 PF01032 FecCD transport family KM394_21935 PF01497 Periplasmic binding protein KM394_21940 PF14143 YrhC-like protein KM394_21945 PF00465 Iron-containing alcohol dehydrogenase KM394_21945 PF00171 Aldehyde dehydrogenase family KM394_21950 PF01053 Cys/Met metabolism PLP-dependent enzyme KM394_21955 PF00291 Pyridoxal-phosphate dependent enzyme KM394_21960 PF01048 Phosphorylase superfamily KM394_21965 PF08241 Methyltransferase domain KM394_21980 PF03717 Penicillin-binding Protein dimerisation domain KM394_21980 PF00905 Penicillin binding protein transpeptidase domain KM394_21985 PF03449 Transcription elongation factor, N-terminal KM394_21985 PF01272 Transcription elongation factor, GreA/GreB, C-term KM394_21990 PF00485 Phosphoribulokinase / Uridine kinase family KM394_21995 PF16325 Peptidase family U32 C-terminal domain KM394_21995 PF01136 Peptidase family U32 KM394_22000 PF01136 Peptidase family U32 KM394_22005 PF01596 O-methyltransferase KM394_22010 PF02618 YceG-like family KM394_22015 PF06949 Protein of unknown function (DUF1292) KM394_22020 PF03652 Holliday junction resolvase KM394_22025 PF06135 IreB regulatory phosphoprotein KM394_22030 PF02272 DHHA1 domain KM394_22030 PF01411 tRNA synthetases class II (A) KM394_22030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM394_22040 PF01594 AI-2E family transporter KM394_22060 PF14490 Helix-hairpin-helix containing domain KM394_22060 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KM394_22060 PF13538 UvrD-like helicase C-terminal domain KM394_22075 PF00266 Aminotransferase class-V KM394_22080 PF02082 Transcriptional regulator KM394_22085 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM394_22085 PF12002 MgsA AAA+ ATPase C terminal KM394_22085 PF16193 AAA C-terminal domain KM394_22095 PF00899 ThiF family KM394_22100 PF02938 GAD domain KM394_22100 PF01336 OB-fold nucleic acid binding domain KM394_22100 PF00152 tRNA synthetases class II (D, K and N) KM394_22105 PF03129 Anticodon binding domain KM394_22105 PF13393 Histidyl-tRNA synthetase KM394_22115 PF02580 D-Tyr-tRNA(Tyr) deacylase KM394_22120 PF02824 TGS domain KM394_22120 PF04607 Region found in RelA / SpoT proteins KM394_22120 PF13291 ACT domain KM394_22125 PF00156 Phosphoribosyl transferase domain KM394_22130 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KM394_22130 PF17768 RecJ OB domain KM394_22130 PF01368 DHH family KM394_22130 PF02272 DHHA1 domain KM394_22135 PF16916 Dimerisation domain of Zinc Transporter KM394_22135 PF01545 Cation efflux family KM394_22140 PF02355 Protein export membrane protein KM394_22140 PF07549 SecD/SecF GG Motif KM394_22145 PF13797 Post-transcriptional regulator KM394_22150 PF01943 Polysaccharide biosynthesis protein KM394_22150 PF14667 Polysaccharide biosynthesis C-terminal domain KM394_22155 PF04239 Protein of unknown function (DUF421) KM394_22165 PF02699 Preprotein translocase subunit KM394_22170 PF01702 Queuine tRNA-ribosyltransferase KM394_22175 PF02547 Queuosine biosynthesis protein KM394_22180 PF11146 Protein of unknown function (DUF2905) KM394_22185 PF17864 RuvB AAA lid domain KM394_22185 PF05491 RuvB C-terminal winged helix domain KM394_22185 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM394_22190 PF01330 RuvA N terminal domain KM394_22190 PF07499 RuvA, C-terminal domain KM394_22195 PF01497 Periplasmic binding protein KM394_22205 PF00892 EamA-like transporter family KM394_22210 PF00892 EamA-like transporter family KM394_22215 PF01022 Bacterial regulatory protein, arsR family KM394_22230 PF01476 LysM domain KM394_22235 PF02445 Quinolinate synthetase A protein KM394_22240 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KM394_22240 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KM394_22245 PF00890 FAD binding domain KM394_22245 PF02910 Fumarate reductase flavoprotein C-term KM394_22250 PF00266 Aminotransferase class-V KM394_22255 PF02829 3H domain KM394_22255 PF08279 HTH domain KM394_22260 PF03473 MOSC domain KM394_22260 PF03475 3-alpha domain KM394_22265 PF01842 ACT domain KM394_22265 PF00800 Prephenate dehydratase KM394_22270 PF02687 FtsX-like permease family KM394_22275 PF02687 FtsX-like permease family KM394_22280 PF00005 ABC transporter KM394_22290 PF00486 Transcriptional regulatory protein, C terminal KM394_22290 PF00072 Response regulator receiver domain KM394_22295 PF09269 Domain of unknown function (DUF1967) KM394_22295 PF01018 GTP1/OBG KM394_22295 PF01926 50S ribosome-binding GTPase KM394_22300 PF14682 Sporulation initiation phospho-transferase B, C-terminal KM394_22300 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM394_22305 PF01016 Ribosomal L27 protein KM394_22310 PF04327 Cysteine protease Prp KM394_22315 PF00829 Ribosomal prokaryotic L21 protein KM394_22320 PF10150 Ribonuclease E/G family KM394_22320 PF00575 S1 RNA binding domain KM394_22325 PF02163 Peptidase family M50 KM394_22330 PF01551 Peptidase family M23 KM394_22335 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KM394_22340 PF03775 Septum formation inhibitor MinC, C-terminal domain KM394_22350 PF04085 rod shape-determining protein MreC KM394_22360 PF04002 RadC-like JAB domain KM394_22365 PF02545 Maf-like protein KM394_22375 PF08245 Mur ligase middle domain KM394_22375 PF02875 Mur ligase family, glutamate ligase domain KM394_22380 PF10458 Valyl tRNA synthetase tRNA binding arm KM394_22380 PF08264 Anticodon-binding domain of tRNA KM394_22380 PF00133 tRNA synthetases class I (I, L, M and V) KM394_22390 PF01476 LysM domain KM394_22395 PF00202 Aminotransferase class-III KM394_22400 PF00490 Delta-aminolevulinic acid dehydratase KM394_22405 PF02602 Uroporphyrinogen-III synthase HemD KM394_22410 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KM394_22410 PF03900 Porphobilinogen deaminase, C-terminal domain KM394_22415 PF01578 Cytochrome C assembly protein KM394_22420 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KM394_22420 PF01488 Shikimate / quinate 5-dehydrogenase KM394_22420 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KM394_22425 PF01047 MarR family KM394_22430 PF02566 OsmC-like protein KM394_22435 PF01926 50S ribosome-binding GTPase KM394_22440 PF00004 ATPase family associated with various cellular activities (AAA) KM394_22440 PF02190 ATP-dependent protease La (LON) substrate-binding domain KM394_22440 PF05362 Lon protease (S16) C-terminal proteolytic domain KM394_22445 PF05362 Lon protease (S16) C-terminal proteolytic domain KM394_22445 PF00004 ATPase family associated with various cellular activities (AAA) KM394_22450 PF06689 ClpX C4-type zinc finger KM394_22450 PF07724 AAA domain (Cdc48 subfamily) KM394_22450 PF10431 C-terminal, D2-small domain, of ClpB protein KM394_22455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM394_22455 PF05698 Bacterial trigger factor protein (TF) C-terminus KM394_22455 PF05697 Bacterial trigger factor protein (TF) KM394_22470 PF11724 YvbH-like oligomerisation region KM394_22470 PF08000 Bacterial PH domain KM394_22490 PF12850 Calcineurin-like phosphoesterase superfamily domain KM394_22495 PF01725 Ham1 family KM394_22500 PF01138 3' exoribonuclease family, domain 1 KM394_22500 PF03725 3' exoribonuclease family, domain 2 KM394_22505 PF10646 Sporulation and spore germination KM394_22510 PF01177 Asp/Glu/Hydantoin racemase KM394_22515 PF07690 Major Facilitator Superfamily KM394_22525 PF00440 Bacterial regulatory proteins, tetR family KM394_22540 PF00196 Bacterial regulatory proteins, luxR family KM394_22545 PF00860 Permease family KM394_22555 PF07969 Amidohydrolase family KM394_22560 PF07969 Amidohydrolase family KM394_22565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_22570 PF12911 N-terminal TM domain of oligopeptide transport permease C KM394_22570 PF00528 Binding-protein-dependent transport system inner membrane component KM394_22575 PF00528 Binding-protein-dependent transport system inner membrane component KM394_22580 PF00005 ABC transporter KM394_22580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM394_22585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM394_22585 PF00005 ABC transporter KM394_22590 PF06580 Histidine kinase KM394_22590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_22590 PF07694 5TMR of 5TMR-LYT KM394_22595 PF04397 LytTr DNA-binding domain KM394_22595 PF00072 Response regulator receiver domain KM394_22610 PF04024 PspC domain KM394_22615 PF01381 Helix-turn-helix KM394_22615 PF07883 Cupin domain KM394_22620 PF13536 Putative multidrug resistance efflux transporter KM394_22625 PF00230 Major intrinsic protein KM394_22630 PF02082 Transcriptional regulator KM394_22640 PF00005 ABC transporter KM394_22640 PF13732 Domain of unknown function (DUF4162) KM394_22645 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KM394_22655 PF01618 MotA/TolQ/ExbB proton channel family KM394_22660 PF02557 D-alanyl-D-alanine carboxypeptidase KM394_22665 PF03061 Thioesterase superfamily KM394_22670 PF13085 2Fe-2S iron-sulfur cluster binding domain KM394_22670 PF13183 4Fe-4S dicluster domain KM394_22675 PF00890 FAD binding domain KM394_22675 PF02910 Fumarate reductase flavoprotein C-term KM394_22680 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KM394_22685 PF10702 Protein of unknown function (DUF2507) KM394_22690 PF02151 UvrB/uvrC motif KM394_22690 PF01541 GIY-YIG catalytic domain KM394_22690 PF08459 UvrC Helix-hairpin-helix N-terminal KM394_22695 PF00085 Thioredoxin KM394_22700 PF00766 Electron transfer flavoprotein FAD-binding domain KM394_22700 PF01012 Electron transfer flavoprotein domain KM394_22705 PF01012 Electron transfer flavoprotein domain KM394_22710 PF00378 Enoyl-CoA hydratase/isomerase KM394_22715 PF00440 Bacterial regulatory proteins, tetR family KM394_22715 PF08359 YsiA-like protein, C-terminal region KM394_22720 PF13193 AMP-binding enzyme C-terminal domain KM394_22720 PF00501 AMP-binding enzyme KM394_22730 PF01497 Periplasmic binding protein KM394_22735 PF01032 FecCD transport family KM394_22740 PF05163 DinB family KM394_22770 PF00005 ABC transporter KM394_22775 PF00512 His Kinase A (phospho-acceptor) domain KM394_22775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_22780 PF00072 Response regulator receiver domain KM394_22780 PF00486 Transcriptional regulatory protein, C terminal KM394_22790 PF09962 Uncharacterized conserved protein (DUF2196) KM394_22795 PF10672 S-adenosylmethionine-dependent methyltransferase KM394_22795 PF17785 PUA-like domain KM394_22805 PF03992 Antibiotic biosynthesis monooxygenase KM394_22810 PF04203 Sortase domain KM394_22815 PF00005 ABC transporter KM394_22820 PF01032 FecCD transport family KM394_22825 PF01497 Periplasmic binding protein KM394_22830 PF05031 Iron Transport-associated domain KM394_22840 PF05031 Iron Transport-associated domain KM394_22845 PF05525 Branched-chain amino acid transport protein KM394_22850 PF01479 S4 domain KM394_22850 PF00849 RNA pseudouridylate synthase KM394_22855 PF00488 MutS domain V KM394_22855 PF01713 Smr domain KM394_22860 PF14791 DNA polymerase beta thumb KM394_22860 PF14716 Helix-hairpin-helix domain KM394_22860 PF02811 PHP domain KM394_22865 PF02674 Colicin V production protein KM394_22870 PF05164 Cell division protein ZapA KM394_22875 PF11858 Domain of unknown function (DUF3378) KM394_22875 PF01351 Ribonuclease HII KM394_22895 PF01336 OB-fold nucleic acid binding domain KM394_22895 PF00152 tRNA synthetases class II (D, K and N) KM394_22900 PF03147 Ferredoxin-fold anticodon binding domain KM394_22900 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KM394_22900 PF03484 tRNA synthetase B5 domain KM394_22900 PF01588 Putative tRNA binding domain KM394_22900 PF03483 B3/4 domain KM394_22905 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KM394_22905 PF01409 tRNA synthetases class II core domain (F) KM394_22910 PF00588 SpoU rRNA Methylase family KM394_22910 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM394_22915 PF14098 Small, acid-soluble spore protein I KM394_22920 PF01966 HD domain KM394_22945 PF07690 Major Facilitator Superfamily KM394_22955 PF16859 Tetracyclin repressor-like, C-terminal domain KM394_22955 PF00440 Bacterial regulatory proteins, tetR family KM394_22960 PF05343 M42 glutamyl aminopeptidase KM394_22970 PF00453 Ribosomal protein L20 KM394_22975 PF01632 Ribosomal protein L35 KM394_22980 PF05198 Translation initiation factor IF-3, N-terminal domain KM394_22980 PF00707 Translation initiation factor IF-3, C-terminal domain KM394_22985 PF03129 Anticodon binding domain KM394_22985 PF02824 TGS domain KM394_22985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM394_22985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM394_22990 PF08812 YtxC-like family KM394_22995 PF07319 Primosomal protein DnaI N-terminus KM394_22995 PF01695 IstB-like ATP binding protein KM394_23000 PF07261 Replication initiation and membrane attachment KM394_23005 PF03477 ATP cone domain KM394_23010 PF02675 S-adenosylmethionine decarboxylase KM394_23015 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM394_23015 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM394_23020 PF01121 Dephospho-CoA kinase KM394_23025 PF02659 Putative manganese efflux pump KM394_23030 PF06827 Zinc finger found in FPG and IleRS KM394_23030 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KM394_23030 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KM394_23035 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM394_23035 PF01367 5'-3' exonuclease, C-terminal SAM fold KM394_23035 PF00476 DNA polymerase family A KM394_23040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_23040 PF00512 His Kinase A (phospho-acceptor) domain KM394_23040 PF00989 PAS fold KM394_23040 PF16736 Single Cache-like KM394_23045 PF00072 Response regulator receiver domain KM394_23045 PF00486 Transcriptional regulatory protein, C terminal KM394_23060 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM394_23060 PF00056 lactate/malate dehydrogenase, NAD binding domain KM394_23065 PF00180 Isocitrate/isopropylmalate dehydrogenase KM394_23070 PF00285 Citrate synthase, C-terminal domain KM394_23075 PF04284 Protein of unknown function (DUF441) KM394_23080 PF01594 AI-2E family transporter KM394_23085 PF04186 FxsA cytoplasmic membrane protein KM394_23090 PF02887 Pyruvate kinase, alpha/beta domain KM394_23090 PF00391 PEP-utilising enzyme, mobile domain KM394_23090 PF00224 Pyruvate kinase, barrel domain KM394_23095 PF00365 Phosphofructokinase KM394_23100 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KM394_23105 PF01039 Carboxyl transferase domain KM394_23105 PF17848 Acetyl-coA carboxylase zinc finger domain KM394_23110 PF00392 Bacterial regulatory proteins, gntR family KM394_23115 PF00390 Malic enzyme, N-terminal domain KM394_23115 PF03949 Malic enzyme, NAD binding domain KM394_23120 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM394_23120 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM394_23120 PF14579 Helix-hairpin-helix motif KM394_23120 PF02811 PHP domain KM394_23120 PF01336 OB-fold nucleic acid binding domain KM394_23125 PF14034 Sporulation protein YtrH KM394_23135 PF01368 DHH family KM394_23135 PF02272 DHHA1 domain KM394_23140 PF14007 YtpI-like protein KM394_23155 PF00392 Bacterial regulatory proteins, gntR family KM394_23155 PF00571 CBS domain KM394_23155 PF03061 Thioesterase superfamily KM394_23155 PF07085 DRTGG domain KM394_23170 PF01321 Creatinase/Prolidase N-terminal domain KM394_23170 PF00557 Metallopeptidase family M24 KM394_23175 PF11518 Protein of unknown function (DUF3221) KM394_23205 PF12746 GNAT acetyltransferase KM394_23210 PF07883 Cupin domain KM394_23220 PF01381 Helix-turn-helix KM394_23230 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM394_23230 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM394_23240 PF00582 Universal stress protein family KM394_23260 PF14698 Argininosuccinate lyase C-terminal KM394_23260 PF00206 Lyase KM394_23265 PF00764 Arginosuccinate synthase KM394_23280 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM394_23280 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM394_23285 PF12787 EcsC protein family KM394_23300 PF00871 Acetokinase family KM394_23305 PF02384 N-6 DNA Methylase KM394_23310 PF08534 Redoxin KM394_23315 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM394_23325 PF01513 ATP-NAD kinase KM394_23330 PF07969 Amidohydrolase family KM394_23340 PF00501 AMP-binding enzyme KM394_23340 PF13193 AMP-binding enzyme C-terminal domain KM394_23345 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM394_23350 PF02568 Thiamine biosynthesis protein (ThiI) KM394_23350 PF02926 THUMP domain KM394_23355 PF00266 Aminotransferase class-V KM394_23360 PF06160 Septation ring formation regulator, EzrA KM394_23365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM394_23365 PF03466 LysR substrate binding domain KM394_23370 PF00892 EamA-like transporter family KM394_23380 PF13185 GAF domain KM394_23385 PF01053 Cys/Met metabolism PLP-dependent enzyme KM394_23390 PF01479 S4 domain KM394_23390 PF00163 Ribosomal protein S4/S9 N-terminal domain KM394_23405 PF01479 S4 domain KM394_23405 PF00579 tRNA synthetases class I (W and Y) KM394_23415 PF04542 Sigma-70 region 2 KM394_23415 PF08281 Sigma-70, region 4 KM394_23425 PF00501 AMP-binding enzyme KM394_23425 PF13193 AMP-binding enzyme C-terminal domain KM394_23430 PF00583 Acetyltransferase (GNAT) family KM394_23435 PF00571 CBS domain KM394_23440 PF00850 Histone deacetylase domain KM394_23450 PF00072 Response regulator receiver domain KM394_23450 PF00486 Transcriptional regulatory protein, C terminal KM394_23455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_23455 PF00512 His Kinase A (phospho-acceptor) domain KM394_23455 PF13426 PAS domain KM394_23455 PF00672 HAMP domain KM394_23460 PF12796 Ankyrin repeats (3 copies) KM394_23465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM394_23470 PF01741 Large-conductance mechanosensitive channel, MscL KM394_23495 PF00356 Bacterial regulatory proteins, lacI family KM394_23500 PF07537 CamS sex pheromone cAM373 precursor KM394_23505 PF11009 Protein of unknown function (DUF2847) KM394_23515 PF02073 Thermophilic metalloprotease (M29) KM394_23535 PF13302 Acetyltransferase (GNAT) domain KM394_23540 PF01225 Mur ligase family, catalytic domain KM394_23540 PF02875 Mur ligase family, glutamate ligase domain KM394_23540 PF08245 Mur ligase middle domain KM394_23550 PF17854 FtsK alpha domain KM394_23550 PF09397 Ftsk gamma domain KM394_23550 PF01580 FtsK/SpoIIIE family KM394_23560 PF01588 Putative tRNA binding domain KM394_23560 PF14794 Domain of unknown function (DUF4479) KM394_23565 PF07285 Protein of unknown function (DUF1444) KM394_23570 PF00085 Thioredoxin KM394_23575 PF01931 Protein of unknown function DUF84 KM394_23580 PF05343 M42 glutamyl aminopeptidase KM394_23590 PF00753 Metallo-beta-lactamase superfamily KM394_23595 PF02390 Putative methyltransferase KM394_23600 PF14165 YtzH-like protein KM394_23605 PF01636 Phosphotransferase enzyme family KM394_23610 PF00128 Alpha amylase, catalytic domain KM394_23610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM394_23610 PF17999 Pullulanase N1-terminal domain KM394_23615 PF02834 LigT like Phosphoesterase KM394_23625 PF08220 DeoR-like helix-turn-helix domain KM394_23630 PF00849 RNA pseudouridylate synthase KM394_23630 PF01479 S4 domain KM394_23635 PF14667 Polysaccharide biosynthesis C-terminal domain KM394_23635 PF01943 Polysaccharide biosynthesis protein KM394_23645 PF07690 Major Facilitator Superfamily KM394_23650 PF01022 Bacterial regulatory protein, arsR family KM394_23655 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KM394_23665 PF10957 Sporulation protein Cse60 KM394_23675 PF02559 CarD-like/TRCF domain KM394_23685 PF06800 Sugar transport protein KM394_23700 PF02391 MoaE protein KM394_23705 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KM394_23710 PF03453 MoeA N-terminal region (domain I and II) KM394_23710 PF03454 MoeA C-terminal region (domain IV) KM394_23710 PF00994 Probable molybdopterin binding domain KM394_23715 PF01967 MoaC family KM394_23720 PF00899 ThiF family KM394_23725 PF04055 Radical SAM superfamily KM394_23725 PF06463 Molybdenum Cofactor Synthesis C KM394_23745 PF00581 Rhodanese-like domain KM394_23755 PF00561 alpha/beta hydrolase fold KM394_23760 PF03323 Bacillus/Clostridium GerA spore germination protein KM394_23765 PF03845 Spore germination protein KM394_23795 PF13603 Leucyl-tRNA synthetase, Domain 2 KM394_23795 PF08264 Anticodon-binding domain of tRNA KM394_23795 PF00133 tRNA synthetases class I (I, L, M and V) KM394_23795 PF09334 tRNA synthetases class I (M) KM394_23800 PF07690 Major Facilitator Superfamily KM394_23805 PF00999 Sodium/hydrogen exchanger family KM394_23810 PF02080 TrkA-C domain KM394_23815 PF00589 Phage integrase family KM394_23825 PF00005 ABC transporter KM394_23830 PF04235 Protein of unknown function (DUF418) KM394_23830 PF07786 Protein of unknown function (DUF1624) KM394_23840 PF10732 Protein of unknown function (DUF2524) KM394_23845 PF16199 Radical_SAM C-terminal domain KM394_23845 PF04055 Radical SAM superfamily KM394_23850 PF06962 Putative rRNA methylase KM394_23855 PF00005 ABC transporter KM394_23855 PF13732 Domain of unknown function (DUF4162) KM394_23865 PF01177 Asp/Glu/Hydantoin racemase KM394_23880 PF10776 Protein of unknown function (DUF2600) KM394_23885 PF12146 Serine aminopeptidase, S33 KM394_23890 PF00132 Bacterial transferase hexapeptide (six repeats) KM394_23895 PF01569 PAP2 superfamily KM394_23900 PF00534 Glycosyl transferases group 1 KM394_23900 PF13439 Glycosyltransferase Family 4 KM394_23905 PF12804 MobA-like NTP transferase domain KM394_23910 PF00994 Probable molybdopterin binding domain KM394_23925 PF02772 S-adenosylmethionine synthetase, central domain KM394_23925 PF02773 S-adenosylmethionine synthetase, C-terminal domain KM394_23925 PF00438 S-adenosylmethionine synthetase, N-terminal domain KM394_23930 PF01293 Phosphoenolpyruvate carboxykinase KM394_23965 PF01784 NIF3 (NGG1p interacting factor 3) KM394_23970 PF00512 His Kinase A (phospho-acceptor) domain KM394_23970 PF00989 PAS fold KM394_23970 PF13188 PAS domain KM394_23970 PF13426 PAS domain KM394_23970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_23975 PF08447 PAS fold KM394_23975 PF00512 His Kinase A (phospho-acceptor) domain KM394_23975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_23975 PF00989 PAS fold KM394_23980 PF00561 alpha/beta hydrolase fold KM394_23980 PF08386 TAP-like protein KM394_24005 PF00005 ABC transporter KM394_24010 PF00528 Binding-protein-dependent transport system inner membrane component KM394_24035 PF00293 NUDIX domain KM394_24055 PF02664 S-Ribosylhomocysteinase (LuxS) KM394_24060 PF01809 Putative membrane protein insertion efficiency factor KM394_24065 PF00484 Carbonic anhydrase KM394_24070 PF01654 Cytochrome bd terminal oxidase subunit I KM394_24075 PF02322 Cytochrome bd terminal oxidase subunit II KM394_24080 PF10676 Spore germination protein gerPA/gerPF KM394_24095 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM394_24095 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM394_24120 PF04012 PspA/IM30 family KM394_24135 PF07670 Nucleoside recognition KM394_24135 PF02421 Ferrous iron transport protein B KM394_24135 PF17910 FeoB cytosolic helical domain KM394_24135 PF07664 Ferrous iron transport protein B C terminus KM394_24145 PF09515 Thiamine transporter protein (Thia_YuaJ) KM394_24150 PF00672 HAMP domain KM394_24150 PF00512 His Kinase A (phospho-acceptor) domain KM394_24150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_24155 PF00486 Transcriptional regulatory protein, C terminal KM394_24155 PF00072 Response regulator receiver domain KM394_24180 PF00156 Phosphoribosyl transferase domain KM394_24185 PF00781 Diacylglycerol kinase catalytic domain KM394_24205 PF00248 Aldo/keto reductase family KM394_24220 PF09335 SNARE associated Golgi protein KM394_24225 PF00398 Ribosomal RNA adenine dimethylase KM394_24230 PF02687 FtsX-like permease family KM394_24235 PF00005 ABC transporter KM394_24240 PF06445 GyrI-like small molecule binding domain KM394_24240 PF12833 Helix-turn-helix domain KM394_24245 PF00486 Transcriptional regulatory protein, C terminal KM394_24245 PF00072 Response regulator receiver domain KM394_24250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_24255 PF02687 FtsX-like permease family KM394_24265 PF02687 FtsX-like permease family KM394_24270 PF00005 ABC transporter KM394_24285 PF02447 GntP family permease KM394_24290 PF00392 Bacterial regulatory proteins, gntR family KM394_24290 PF07702 UTRA domain KM394_24300 PF07071 KDGP aldolase KM394_24305 PF03841 L-seryl-tRNA selenium transferase KM394_24310 PF01979 Amidohydrolase family KM394_24325 PF02557 D-alanyl-D-alanine carboxypeptidase KM394_24330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_24330 PF00512 His Kinase A (phospho-acceptor) domain KM394_24335 PF00072 Response regulator receiver domain KM394_24335 PF00486 Transcriptional regulatory protein, C terminal KM394_24340 PF13378 Enolase C-terminal domain-like KM394_24340 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM394_24345 PF13193 AMP-binding enzyme C-terminal domain KM394_24345 PF00501 AMP-binding enzyme KM394_24350 PF00378 Enoyl-CoA hydratase/isomerase KM394_24355 PF00561 alpha/beta hydrolase fold KM394_24360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM394_24360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM394_24360 PF16582 Middle domain of thiamine pyrophosphate KM394_24365 PF00425 chorismate binding enzyme KM394_24370 PF01040 UbiA prenyltransferase family KM394_24375 PF01258 Prokaryotic dksA/traR C4-type zinc finger KM394_24380 PF00313 'Cold-shock' DNA-binding domain KM394_24395 PF00343 Carbohydrate phosphorylase KM394_24400 PF08323 Starch synthase catalytic domain KM394_24400 PF00534 Glycosyl transferases group 1 KM394_24405 PF00483 Nucleotidyl transferase KM394_24410 PF00483 Nucleotidyl transferase KM394_24415 PF00128 Alpha amylase, catalytic domain KM394_24415 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM394_24415 PF02806 Alpha amylase, C-terminal all-beta domain KM394_24430 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM394_24430 PF00056 lactate/malate dehydrogenase, NAD binding domain KM394_24525 PF05698 Bacterial trigger factor protein (TF) C-terminus KM394_24525 PF05697 Bacterial trigger factor protein (TF) KM394_24560 PF02308 MgtC family KM394_24565 PF07885 Ion channel KM394_24565 PF02254 TrkA-N domain KM394_24570 PF08868 YugN-like family KM394_24575 PF00342 Phosphoglucose isomerase KM394_24580 PF04070 Domain of unknown function (DUF378) KM394_24585 PF00575 S1 RNA binding domain KM394_24590 PF00155 Aminotransferase class I and II KM394_24595 PF01037 Lrp/AsnC ligand binding domain KM394_24600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM394_24600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM394_24605 PF00561 alpha/beta hydrolase fold KM394_24605 PF08386 TAP-like protein KM394_24615 PF00155 Aminotransferase class I and II KM394_24630 PF08810 Kinase associated protein B KM394_24635 PF00929 Exonuclease KM394_24640 PF03600 Citrate transporter KM394_24655 PF03129 Anticodon binding domain KM394_24655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM394_24660 PF03061 Thioesterase superfamily KM394_24670 PF02632 BioY family KM394_24680 PF00483 Nucleotidyl transferase KM394_24685 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM394_24685 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM394_24685 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM394_24685 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM394_24690 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM394_24690 PF10372 Bacterial membrane-spanning protein N-terminus KM394_24695 PF00883 Cytosol aminopeptidase family, catalytic domain KM394_24695 PF02789 Cytosol aminopeptidase family, N-terminal domain KM394_24700 PF06725 3D domain KM394_24710 PF00293 NUDIX domain KM394_24710 PF13344 Haloacid dehalogenase-like hydrolase KM394_24715 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_24720 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_24730 PF06445 GyrI-like small molecule binding domain KM394_24745 PF04463 Protein of unknown function (DUF523) KM394_24765 PF01521 Iron-sulphur cluster biosynthesis KM394_24770 PF01678 Diaminopimelate epimerase KM394_24775 PF07293 Protein of unknown function (DUF1450) KM394_24780 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_24790 PF09383 NIL domain KM394_24790 PF00005 ABC transporter KM394_24795 PF03649 Uncharacterised protein family (UPF0014) KM394_24800 PF03831 PhnA domain KM394_24800 PF08274 PhnA Zinc-Ribbon KM394_24835 PF13427 Domain of unknown function (DUF4111) KM394_24835 PF01909 Nucleotidyltransferase domain KM394_24840 PF07315 Protein of unknown function (DUF1462) KM394_24845 PF01106 NifU-like domain KM394_24860 PF04608 Phosphatidylglycerophosphatase A KM394_24870 PF02525 Flavodoxin-like fold KM394_24875 PF13344 Haloacid dehalogenase-like hydrolase KM394_24885 PF01934 Protein of unknown function DUF86 KM394_24890 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM394_24905 PF06265 Protein of unknown function (DUF1027) KM394_24910 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM394_24915 PF13411 MerR HTH family regulatory protein KM394_24915 PF07739 TipAS antibiotic-recognition domain KM394_24920 PF10086 YhfC intramembrane metalloprotease KM394_24940 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KM394_24940 PF04055 Radical SAM superfamily KM394_24945 PF01551 Peptidase family M23 KM394_24955 PF08827 Domain of unknown function (DUF1805) KM394_24960 PF02872 5'-nucleotidase, C-terminal domain KM394_24965 PF03551 Transcriptional regulator PadR-like family KM394_24970 PF04892 VanZ like family KM394_24975 PF01458 Uncharacterized protein family (UPF0051) KM394_24980 PF01592 NifU-like N terminal domain KM394_24985 PF00266 Aminotransferase class-V KM394_24990 PF01458 Uncharacterized protein family (UPF0051) KM394_24995 PF00005 ABC transporter KM394_25000 PF03180 NLPA lipoprotein KM394_25005 PF03180 NLPA lipoprotein KM394_25010 PF00528 Binding-protein-dependent transport system inner membrane component KM394_25015 PF09383 NIL domain KM394_25015 PF00005 ABC transporter KM394_25025 PF00085 Thioredoxin KM394_25030 PF01751 Toprim domain KM394_25035 PF01597 Glycine cleavage H-protein KM394_25040 PF03960 ArsC family KM394_25085 PF00056 lactate/malate dehydrogenase, NAD binding domain KM394_25085 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM394_25105 PF13305 Tetracyclin repressor-like, C-terminal domain KM394_25105 PF00440 Bacterial regulatory proteins, tetR family KM394_25110 PF00753 Metallo-beta-lactamase superfamily KM394_25115 PF02770 Acyl-CoA dehydrogenase, middle domain KM394_25115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM394_25115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM394_25120 PF02803 Thiolase, C-terminal domain KM394_25120 PF00108 Thiolase, N-terminal domain KM394_25125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM394_25125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM394_25125 PF00378 Enoyl-CoA hydratase/isomerase KM394_25130 PF14115 YuzL-like protein KM394_25135 PF00768 D-alanyl-D-alanine carboxypeptidase KM394_25135 PF07943 Penicillin-binding protein 5, C-terminal domain KM394_25140 PF01619 Proline dehydrogenase KM394_25145 PF10835 Protein of unknown function (DUF2573) KM394_25150 PF01910 Thiamine-binding protein KM394_25155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM394_25155 PF02743 Cache domain KM394_25155 PF00672 HAMP domain KM394_25175 PF07690 Major Facilitator Superfamily KM394_25180 PF13520 Amino acid permease KM394_25190 PF02096 60Kd inner membrane protein KM394_25200 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM394_25200 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM394_25235 PF09335 SNARE associated Golgi protein KM394_25245 PF17969 L,D-transpeptidase C-terminal domain KM394_25245 PF03734 L,D-transpeptidase catalytic domain KM394_25250 PF00072 Response regulator receiver domain KM394_25250 PF00486 Transcriptional regulatory protein, C terminal KM394_25255 PF00989 PAS fold KM394_25255 PF00512 His Kinase A (phospho-acceptor) domain KM394_25255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_25255 PF16736 Single Cache-like KM394_25265 PF08264 Anticodon-binding domain of tRNA KM394_25265 PF09334 tRNA synthetases class I (M) KM394_25275 PF00672 HAMP domain KM394_25275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM394_25280 PF01883 Iron-sulfur cluster assembly protein KM394_25285 PF01447 Thermolysin metallopeptidase, catalytic domain KM394_25285 PF03413 Peptidase propeptide and YPEB domain KM394_25285 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM394_25285 PF07504 Fungalysin/Thermolysin Propeptide Motif KM394_25290 PF02678 Pirin KM394_25290 PF17954 Quercetinase C-terminal cupin domain KM394_25295 PF01047 MarR family KM394_25305 PF00999 Sodium/hydrogen exchanger family KM394_25310 PF02080 TrkA-C domain KM394_25315 PF01235 Sodium:alanine symporter family KM394_25320 PF00210 Ferritin-like domain KM394_25335 PF03641 Possible lysine decarboxylase KM394_25345 PF00210 Ferritin-like domain KM394_25355 PF01773 Na+ dependent nucleoside transporter N-terminus KM394_25355 PF07662 Na+ dependent nucleoside transporter C-terminus KM394_25360 PF01773 Na+ dependent nucleoside transporter N-terminus KM394_25360 PF07662 Na+ dependent nucleoside transporter C-terminus KM394_25365 PF01235 Sodium:alanine symporter family KM394_25370 PF01235 Sodium:alanine symporter family KM394_25375 PF13460 NAD(P)H-binding KM394_25390 PF00248 Aldo/keto reductase family KM394_25395 PF07690 Major Facilitator Superfamily KM394_25400 PF01638 HxlR-like helix-turn-helix KM394_25405 PF07849 Protein of unknown function (DUF1641) KM394_25410 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_25415 PF00579 tRNA synthetases class I (W and Y) KM394_25415 PF01479 S4 domain KM394_25420 PF01565 FAD binding domain KM394_25420 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM394_25430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM394_25430 PF17202 Single cache domain 3 KM394_25430 PF00672 HAMP domain KM394_25440 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM394_25445 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM394_25460 PF13302 Acetyltransferase (GNAT) domain KM394_25465 PF06146 Phosphate-starvation-inducible E KM394_25480 PF00005 ABC transporter KM394_25485 PF01032 FecCD transport family KM394_25490 PF01032 FecCD transport family KM394_25500 PF00486 Transcriptional regulatory protein, C terminal KM394_25500 PF00072 Response regulator receiver domain KM394_25510 PF01668 SmpB protein KM394_25515 PF00773 RNB domain KM394_25515 PF17876 Cold shock domain KM394_25515 PF08206 Ribonuclease B OB domain KM394_25515 PF00575 S1 RNA binding domain KM394_25520 PF12146 Serine aminopeptidase, S33 KM394_25525 PF03840 Preprotein translocase SecG subunit KM394_25530 PF04172 LrgB-like family KM394_25535 PF03788 LrgA family KM394_25540 PF01156 Inosine-uridine preferring nucleoside hydrolase KM394_25635 PF04860 Phage portal protein KM394_25660 PF00589 Phage integrase family KM394_25660 PF02899 Phage integrase, N-terminal SAM-like domain KM394_25665 PF03952 Enolase, N-terminal domain KM394_25665 PF00113 Enolase, C-terminal TIM barrel domain KM394_25670 PF01676 Metalloenzyme superfamily KM394_25670 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KM394_25675 PF00121 Triosephosphate isomerase KM394_25680 PF00162 Phosphoglycerate kinase KM394_25685 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM394_25685 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM394_25690 PF04198 Putative sugar-binding domain KM394_25700 PF00309 Sigma-54 factor, Activator interacting domain (AID) KM394_25700 PF04963 Sigma-54 factor, core binding domain KM394_25700 PF04552 Sigma-54, DNA binding domain KM394_25720 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM394_25725 PF07451 Stage V sporulation protein AD (SpoVAD) KM394_25730 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM394_25740 PF04239 Protein of unknown function (DUF421) KM394_25745 PF00574 Clp protease KM394_25750 PF00381 PTS HPr component phosphorylation site KM394_25755 PF02650 WhiA C-terminal HTH domain KM394_25755 PF14527 WhiA LAGLIDADG-like domain KM394_25755 PF10298 WhiA N-terminal LAGLIDADG-like domain KM394_25760 PF01933 Uncharacterised protein family UPF0052 KM394_25765 PF03668 P-loop ATPase protein family KM394_25770 PF00293 NUDIX domain KM394_25780 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM394_25790 PF14602 Hexapeptide repeat of succinyl-transferase KM394_25795 PF13419 Haloacid dehalogenase-like hydrolase KM394_25800 PF01790 Prolipoprotein diacylglyceryl transferase KM394_25805 PF07475 HPr Serine kinase C-terminal domain KM394_25805 PF02603 HPr Serine kinase N terminus KM394_25810 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KM394_25820 PF00005 ABC transporter KM394_25820 PF17755 UvrA DNA-binding domain KM394_25820 PF17760 UvrA interaction domain KM394_25825 PF00271 Helicase conserved C-terminal domain KM394_25825 PF12344 Ultra-violet resistance protein B KM394_25825 PF17757 UvrB interaction domain KM394_25825 PF02151 UvrB/uvrC motif KM394_25825 PF04851 Type III restriction enzyme, res subunit KM394_25830 PF12323 Helix-turn-helix domain KM394_25830 PF07282 Putative transposase DNA-binding domain KM394_25830 PF01385 Probable transposase KM394_25845 PF07739 TipAS antibiotic-recognition domain KM394_25845 PF13411 MerR HTH family regulatory protein KM394_25870 PF03601 Conserved hypothetical protein 698 KM394_25875 PF03466 LysR substrate binding domain KM394_25875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM394_25880 PF13411 MerR HTH family regulatory protein KM394_25885 PF03358 NADPH-dependent FMN reductase KM394_25890 PF00005 ABC transporter KM394_25890 PF12848 ABC transporter KM394_25900 PF00664 ABC transporter transmembrane region KM394_25900 PF00005 ABC transporter KM394_25905 PF17820 PDZ domain KM394_25910 PF17820 PDZ domain KM394_25910 PF03572 Peptidase family S41 KM394_25910 PF01471 Putative peptidoglycan binding domain KM394_25915 PF02687 FtsX-like permease family KM394_25915 PF18075 FtsX extracellular domain KM394_25920 PF00005 ABC transporter KM394_25925 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM394_25935 PF07516 SecA Wing and Scaffold domain KM394_25935 PF02810 SEC-C motif KM394_25935 PF01043 SecA preprotein cross-linking domain KM394_25935 PF07517 SecA DEAD-like domain KM394_25940 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KM394_25940 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KM394_25945 PF00313 'Cold-shock' DNA-binding domain KM394_25955 PF00271 Helicase conserved C-terminal domain KM394_25955 PF04851 Type III restriction enzyme, res subunit KM394_25960 PF00877 NlpC/P60 family KM394_25960 PF01476 LysM domain KM394_25965 PF01638 HxlR-like helix-turn-helix KM394_25970 PF02645 Uncharacterised protein, DegV family COG1307 KM394_25975 PF09186 Domain of unknown function (DUF1949) KM394_25975 PF01205 Uncharacterized protein family UPF0029 KM394_25980 PF03816 Cell envelope-related transcriptional attenuator domain KM394_25985 PF02350 UDP-N-acetylglucosamine 2-epimerase KM394_25990 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM394_25990 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM394_25990 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM394_25995 PF00953 Glycosyl transferase family 4 KM394_26000 PF01522 Polysaccharide deacetylase KM394_26005 PF00874 PRD domain KM394_26005 PF00158 Sigma-54 interaction domain KM394_26005 PF03610 PTS system fructose IIA component KM394_26015 PF02417 Chromate transporter KM394_26020 PF04794 YdjC-like protein KM394_26025 PF02056 Family 4 glycosyl hydrolase KM394_26025 PF11975 Family 4 glycosyl hydrolase C-terminal domain KM394_26030 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM394_26035 PF02378 Phosphotransferase system, EIIC KM394_26040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM394_26050 PF02675 S-adenosylmethionine decarboxylase KM394_26055 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM394_26060 PF02378 Phosphotransferase system, EIIC KM394_26065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM394_26070 PF00375 Sodium:dicarboxylate symporter family KM394_26080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM394_26090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM394_26090 PF03466 LysR substrate binding domain KM394_26110 PF01654 Cytochrome bd terminal oxidase subunit I KM394_26115 PF02322 Cytochrome bd terminal oxidase subunit II KM394_26120 PF02040 Arsenical pump membrane protein KM394_26125 PF13667 ThiC-associated domain KM394_26125 PF01964 Radical SAM ThiC family KM394_26130 PF02652 L-lactate permease KM394_26140 PF09988 Uncharacterized metal-binding protein (DUF2227) KM394_26150 PF00884 Sulfatase KM394_26155 PF01063 Amino-transferase class IV KM394_26165 PF01773 Na+ dependent nucleoside transporter N-terminus KM394_26165 PF07662 Na+ dependent nucleoside transporter C-terminus KM394_26180 PF02028 BCCT, betaine/carnitine/choline family transporter KM394_26185 PF06725 3D domain KM394_26185 PF01476 LysM domain KM394_26210 PF04434 SWIM zinc finger KM394_26215 PF00176 SNF2 family N-terminal domain KM394_26215 PF00271 Helicase conserved C-terminal domain KM394_26215 PF12419 SNF2 Helicase protein KM394_26245 PF04542 Sigma-70 region 2 KM394_26245 PF04545 Sigma-70, region 4 KM394_26250 PF04893 Yip1 domain KM394_26255 PF02687 FtsX-like permease family KM394_26255 PF12704 MacB-like periplasmic core domain KM394_26260 PF00005 ABC transporter KM394_26280 PF07690 Major Facilitator Superfamily KM394_26295 PF00989 PAS fold KM394_26295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_26295 PF16736 Single Cache-like KM394_26295 PF00512 His Kinase A (phospho-acceptor) domain KM394_26300 PF00486 Transcriptional regulatory protein, C terminal KM394_26300 PF00072 Response regulator receiver domain KM394_26305 PF16363 GDP-mannose 4,6 dehydratase KM394_26310 PF03816 Cell envelope-related transcriptional attenuator domain KM394_26315 PF07977 FabA-like domain KM394_26320 PF02350 UDP-N-acetylglucosamine 2-epimerase KM394_26325 PF00005 ABC transporter KM394_26325 PF08239 Bacterial SH3 domain KM394_26330 PF01061 ABC-2 type transporter KM394_26335 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM394_26335 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM394_26335 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM394_26380 PF12116 Stage III sporulation protein D KM394_26395 PF01551 Peptidase family M23 KM394_26405 PF00005 ABC transporter KM394_26415 PF08486 Stage II sporulation protein KM394_26420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM394_26430 PF06612 Protein of unknown function (DUF1146) KM394_26435 PF00361 Proton-conducting membrane transporter KM394_26440 PF00361 Proton-conducting membrane transporter KM394_26445 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus KM394_26445 PF00361 Proton-conducting membrane transporter KM394_26445 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM394_26450 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KM394_26455 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KM394_26465 PF00146 NADH dehydrogenase KM394_26470 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KM394_26475 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KM394_26480 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KM394_26485 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KM394_26490 PF00563 EAL domain KM394_26490 PF00990 Diguanylate cyclase, GGDEF domain KM394_26490 PF03707 Bacterial signalling protein N terminal repeat KM394_26505 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KM394_26505 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KM394_26510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM394_26510 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM394_26515 PF00231 ATP synthase KM394_26520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM394_26520 PF00306 ATP synthase alpha/beta chain, C terminal domain KM394_26520 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM394_26525 PF00213 ATP synthase delta (OSCP) subunit KM394_26530 PF00430 ATP synthase B/B' CF(0) KM394_26535 PF00137 ATP synthase subunit C KM394_26540 PF00119 ATP synthase A chain KM394_26545 PF03899 ATP synthase I chain KM394_26565 PF00464 Serine hydroxymethyltransferase KM394_26570 PF04260 Protein of unknown function (DUF436) KM394_26575 PF02502 Ribose/Galactose Isomerase KM394_26580 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM394_26585 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM394_26590 PF07681 DoxX KM394_26595 PF01613 Flavin reductase like domain KM394_26605 PF02659 Putative manganese efflux pump KM394_26610 PF01300 Telomere recombination KM394_26610 PF03481 Putative GTP-binding controlling metal-binding KM394_26620 PF09551 Stage II sporulation protein R (spore_II_R) KM394_26625 PF17827 PrmC N-terminal domain KM394_26625 PF13847 Methyltransferase domain KM394_26630 PF03462 PCRF domain KM394_26630 PF00472 RF-1 domain KM394_26635 PF00265 Thymidine kinase KM394_26640 PF01197 Ribosomal protein L31 KM394_26645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM394_26645 PF07498 Rho termination factor, N-terminal domain KM394_26645 PF07497 Rho termination factor, RNA-binding domain KM394_26650 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM394_26655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM394_26660 PF01116 Fructose-bisphosphate aldolase class-II KM394_26665 PF00072 Response regulator receiver domain KM394_26670 PF10740 Domain of unknown function (DUF2529) KM394_26675 PF00117 Glutamine amidotransferase class-I KM394_26675 PF06418 CTP synthase N-terminus KM394_26680 PF05066 HB1, ASXL, restriction endonuclease HTH domain KM394_26690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM394_26690 PF02770 Acyl-CoA dehydrogenase, middle domain KM394_26690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM394_26695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM394_26695 PF02770 Acyl-CoA dehydrogenase, middle domain KM394_26695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM394_26700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM394_26700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM394_26705 PF02803 Thiolase, C-terminal domain KM394_26705 PF00108 Thiolase, N-terminal domain KM394_26710 PF02754 Cysteine-rich domain KM394_26710 PF13183 4Fe-4S dicluster domain KM394_26715 PF13091 PLD-like domain KM394_26720 PF03851 UV-endonuclease UvdE KM394_26725 PF03707 Bacterial signalling protein N terminal repeat KM394_26725 PF00990 Diguanylate cyclase, GGDEF domain KM394_26725 PF00563 EAL domain KM394_26745 PF00196 Bacterial regulatory proteins, luxR family KM394_26745 PF00072 Response regulator receiver domain KM394_26750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_26750 PF07730 Histidine kinase KM394_26760 PF00005 ABC transporter KM394_26765 PF00557 Metallopeptidase family M24 KM394_26775 PF04389 Peptidase family M28 KM394_26775 PF02225 PA domain KM394_26795 PF08281 Sigma-70, region 4 KM394_26795 PF04542 Sigma-70 region 2 KM394_26800 PF03485 Arginyl tRNA synthetase N terminal domain KM394_26800 PF05746 DALR anticodon binding domain KM394_26800 PF00750 tRNA synthetases class I (R) KM394_26805 PF09148 Domain of unknown function (DUF1934) KM394_26810 PF02016 LD-carboxypeptidase N-terminal domain KM394_26810 PF17676 LD-carboxypeptidase C-terminal domain KM394_26825 PF00491 Arginase family KM394_26830 PF17284 Spermidine synthase tetramerisation domain KM394_26835 PF07690 Major Facilitator Superfamily KM394_26840 PF13411 MerR HTH family regulatory protein KM394_26845 PF03009 Glycerophosphoryl diester phosphodiesterase family KM394_26850 PF00912 Transglycosylase KM394_26850 PF00905 Penicillin binding protein transpeptidase domain KM394_26855 PF08741 YwhD family KM394_26860 PF02163 Peptidase family M50 KM394_26865 PF01361 Tautomerase enzyme KM394_26870 PF01966 HD domain KM394_26875 PF01497 Periplasmic binding protein KM394_26880 PF00005 ABC transporter KM394_26885 PF01032 FecCD transport family KM394_26895 PF07293 Protein of unknown function (DUF1450) KM394_26910 PF03099 Biotin/lipoate A/B protein ligase family KM394_26915 PF01515 Phosphate acetyl/butaryl transferase KM394_26920 PF06778 Chlorite dismutase KM394_26925 PF07943 Penicillin-binding protein 5, C-terminal domain KM394_26925 PF00768 D-alanyl-D-alanine carboxypeptidase KM394_26930 PF07486 Cell Wall Hydrolase KM394_26935 PF09671 Spore coat protein (Spore_GerQ) KM394_26940 PF04241 Protein of unknown function (DUF423) KM394_26950 PF07885 Ion channel KM394_26950 PF02254 TrkA-N domain KM394_26955 PF00860 Permease family KM394_26965 PF12823 Domain of unknown function (DUF3817) KM394_26970 PF03167 Uracil DNA glycosylase superfamily KM394_26975 PF12679 ABC-2 family transporter protein KM394_26980 PF00005 ABC transporter KM394_26985 PF13472 GDSL-like Lipase/Acylhydrolase family KM394_26990 PF00356 Bacterial regulatory proteins, lacI family KM394_26990 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM394_27000 PF01842 ACT domain KM394_27000 PF00742 Homoserine dehydrogenase KM394_27000 PF03447 Homoserine dehydrogenase, NAD binding domain KM394_27005 PF04204 Homoserine O-succinyltransferase KM394_27010 PF01053 Cys/Met metabolism PLP-dependent enzyme KM394_27020 PF13419 Haloacid dehalogenase-like hydrolase KM394_27025 PF00027 Cyclic nucleotide-binding domain KM394_27030 PF02525 Flavodoxin-like fold KM394_27035 PF00072 Response regulator receiver domain KM394_27035 PF00196 Bacterial regulatory proteins, luxR family KM394_27045 PF08543 Phosphomethylpyrimidine kinase KM394_27050 PF07694 5TMR of 5TMR-LYT KM394_27050 PF00990 Diguanylate cyclase, GGDEF domain KM394_27055 PF04328 Selenoprotein, putative KM394_27060 PF02554 Carbon starvation protein CstA KM394_27060 PF13722 5TM C-terminal transporter carbon starvation CstA KM394_27065 PF04397 LytTr DNA-binding domain KM394_27065 PF00072 Response regulator receiver domain KM394_27070 PF07690 Major Facilitator Superfamily KM394_27075 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM394_27090 PF03458 UPF0126 domain KM394_27095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM394_27105 PF03061 Thioesterase superfamily KM394_27115 PF00535 Glycosyl transferase family 2 KM394_27120 PF00005 ABC transporter KM394_27120 PF12848 ABC transporter KM394_27140 PF00535 Glycosyl transferase family 2 KM394_27145 PF00440 Bacterial regulatory proteins, tetR family KM394_27150 PF00873 AcrB/AcrD/AcrF family KM394_27155 PF01625 Peptide methionine sulfoxide reductase KM394_27155 PF01641 SelR domain KM394_27160 PF01594 AI-2E family transporter KM394_27165 PF04172 LrgB-like family KM394_27170 PF03788 LrgA family KM394_27175 PF04397 LytTr DNA-binding domain KM394_27175 PF00072 Response regulator receiver domain KM394_27180 PF06580 Histidine kinase KM394_27180 PF13492 GAF domain KM394_27180 PF07694 5TMR of 5TMR-LYT KM394_27180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_27185 PF07690 Major Facilitator Superfamily KM394_27190 PF02028 BCCT, betaine/carnitine/choline family transporter KM394_27195 PF02898 Nitric oxide synthase, oxygenase domain KM394_27200 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM394_27200 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM394_27210 PF02293 AmiS/UreI family transporter KM394_27220 PF16363 GDP-mannose 4,6 dehydratase KM394_27225 PF03006 Haemolysin-III related KM394_27235 PF00270 DEAD/DEAH box helicase KM394_27235 PF00271 Helicase conserved C-terminal domain KM394_27235 PF03880 DbpA RNA binding domain KM394_27245 PF00478 IMP dehydrogenase / GMP reductase domain KM394_27250 PF08439 Oligopeptidase F KM394_27250 PF01432 Peptidase family M3 KM394_27260 PF02590 Predicted SPOUT methyltransferase KM394_27270 PF13180 PDZ domain KM394_27275 PF00753 Metallo-beta-lactamase superfamily KM394_27280 PF09648 YycH protein KM394_27285 PF07435 YycH protein KM394_27290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM394_27290 PF00512 His Kinase A (phospho-acceptor) domain KM394_27290 PF13426 PAS domain KM394_27290 PF00672 HAMP domain KM394_27295 PF00486 Transcriptional regulatory protein, C terminal KM394_27295 PF00072 Response regulator receiver domain KM394_27320 PF00709 Adenylosuccinate synthetase KM394_27325 PF03796 DnaB-like helicase C terminal domain KM394_27325 PF00772 DnaB-like helicase N terminal domain KM394_27330 PF01281 Ribosomal protein L9, N-terminal domain KM394_27330 PF03948 Ribosomal protein L9, C-terminal domain KM394_27335 PF02272 DHHA1 domain KM394_27335 PF01368 DHH family KM394_27340 PF09991 Predicted membrane protein (DUF2232) KM394_27345 PF01084 Ribosomal protein S18 KM394_27350 PF00436 Single-strand binding protein family KM394_27355 PF01250 Ribosomal protein S6 KM394_27360 PF01926 50S ribosome-binding GTPase KM394_27360 PF06071 Protein of unknown function (DUF933) KM394_27365 PF06107 Bacterial protein of unknown function (DUF951) KM394_27370 PF00924 Mechanosensitive ion channel KM394_27375 PF06866 Protein of unknown function (DUF1256) KM394_27380 PF17762 HTH domain found in ParB protein KM394_27380 PF02195 ParB-like nuclease domain KM394_27385 PF13614 AAA domain KM394_27390 PF17762 HTH domain found in ParB protein KM394_27390 PF02195 ParB-like nuclease domain KM394_27395 PF02527 rRNA small subunit methyltransferase G KM394_27400 PF13932 GidA associated domain KM394_27400 PF01134 Glucose inhibited division protein A KM394_27405 PF01926 50S ribosome-binding GTPase KM394_27405 PF12631 MnmE helical domain KM394_27405 PF10396 GTP-binding protein TrmE N-terminus KM394_27410 PF01424 R3H domain KM394_27410 PF14804 Jag N-terminus KM394_27415 PF02096 60Kd inner membrane protein KM394_27420 PF00825 Ribonuclease P KM394_27425 PF00468 Ribosomal protein L34 KM394_27440 PF08378 Nuclease-related domain KM394_27480 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM394_27560 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM394_27610 PF13427 Domain of unknown function (DUF4111) KM394_27610 PF18765 Polymerase beta, Nucleotidyltransferase KM394_27635 PF01609 Transposase DDE domain KM394_27640 PF01609 Transposase DDE domain KM394_27665 PF01580 FtsK/SpoIIIE family KM394_27665 PF09397 Ftsk gamma domain KM394_27665 PF17854 FtsK alpha domain KM394_27665 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KM394_27680 PF00091 Tubulin/FtsZ family, GTPase domain KM394_27755 PF00437 Type II/IV secretion system protein KM394_27875 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) KM394_27890 PF04235 Protein of unknown function (DUF418) KM394_27910 PF00395 S-layer homology domain KM394_27915 PF01569 PAP2 superfamily KM394_27930 PF00535 Glycosyl transferase family 2 KM394_27935 PF00483 Nucleotidyl transferase KM394_27940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM394_27940 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM394_27940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM394_27980 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM394_27980 PF03497 Anthrax toxin LF subunit KM394_28000 PF08279 HTH domain KM394_28000 PF00874 PRD domain KM394_28000 PF05043 Mga helix-turn-helix domain KM394_28005 PF09385 Histidine kinase N terminal KM394_28020 PF13700 Domain of unknown function (DUF4158) KM394_28020 PF01526 Tn3 transposase DDE domain KM394_28025 PF00239 Resolvase, N terminal domain KM394_28025 PF02796 Helix-turn-helix domain of resolvase KM394_28030 PF03845 Spore germination protein KM394_28035 PF03323 Bacillus/Clostridium GerA spore germination protein KM394_28040 PF05504 Spore germination B3/ GerAC like, C-terminal KM394_28055 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain KM394_28055 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 KM394_28055 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 KM394_28055 PF07691 PA14 domain KM394_28060 PF01022 Bacterial regulatory protein, arsR family KM394_28080 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM394_28080 PF09156 Anthrax toxin lethal factor, middle domain KM394_28100 PF18277 AbrB C-terminal domain KM394_28100 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM394_28110 PF02899 Phage integrase, N-terminal SAM-like domain KM394_28110 PF00589 Phage integrase family KM394_28140 PF14436 Bacterial EndoU nuclease KM394_28140 PF04740 LXG domain of WXG superfamily KM394_28165 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM394_28175 PF00589 Phage integrase family KM394_28200 PF18801 response regulator aspartate phosphatase H, N terminal KM394_28210 PF17209 Hfq protein KM394_28215 PF01022 Bacterial regulatory protein, arsR family KM394_28220 PF02600 Disulfide bond formation protein DsbB KM394_28235 PF00565 Staphylococcal nuclease homologue KM394_28240 PF01131 DNA topoisomerase KM394_28240 PF01751 Toprim domain KM394_28240 PF13342 C-terminal repeat of topoisomerase KM394_28250 PF08708 Primase C terminal 1 (PriCT-1) KM394_28270 PF17362 Family of unknown function KM394_28285 PF17631 Family of unknown function (DUF5512) KM394_28325 PF00437 Type II/IV secretion system protein KM394_28355 PF04956 TrbC/VIRB2 family KM394_28400 PF00877 NlpC/P60 family KM394_28410 PF17632 Family of unknown function (DUF5513) KM394_28435 PF17633 Family of unknown function (DUF5514) KM394_28440 PF17630 Family of unknown function (DUF5511) KM394_28460 PF13154 Protein of unknown function (DUF3991) KM394_28465 PF01751 Toprim domain KM394_28465 PF01131 DNA topoisomerase KM394_28505 PF17443 Uncharacterized protein pXO2-72 KM394_28525 PF00817 impB/mucB/samB family KM394_28525 PF11799 impB/mucB/samB family C-terminal domain KM394_28525 PF11798 IMS family HHH motif KM394_28530 PF13411 MerR HTH family regulatory protein KM394_28530 PF13152 Protein of unknown function (DUF3967) KM394_28535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM394_28565 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM394_28565 PF05043 Mga helix-turn-helix domain KM394_28565 PF00874 PRD domain KM394_28570 PF01810 LysE type translocator KM394_28580 PF00874 PRD domain KM394_28580 PF05043 Mga helix-turn-helix domain KM394_28580 PF08279 HTH domain KM394_28585 PF09385 Histidine kinase N terminal KM394_28595 PF10502 Signal peptidase, peptidase S26 KM394_28610 PF01022 Bacterial regulatory protein, arsR family KM394_28620 PF08245 Mur ligase middle domain KM394_28625 PF14102 Capsule biosynthesis CapC KM394_28630 PF09587 Bacterial capsule synthesis protein PGA_cap KM394_28650 PF05043 Mga helix-turn-helix domain KM394_28650 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM394_28660 PF01569 PAP2 superfamily KM394_28670 PF00440 Bacterial regulatory proteins, tetR family KM394_28675 PF04463 Protein of unknown function (DUF523) KM394_28680 PF02517 CPBP intramembrane metalloprotease KM394_28685 PF01906 Putative heavy-metal-binding KM394_28705 PF01520 N-acetylmuramoyl-L-alanine amidase KM394_28705 PF00395 S-layer homology domain KM394_28720 PF13614 AAA domain