locus-tag class description KM417_00005 PF00308 Bacterial dnaA protein KM417_00005 PF08299 Bacterial dnaA protein helix-turn-helix KM417_00005 PF11638 DnaA N-terminal domain KM417_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KM417_00010 PF02767 DNA polymerase III beta subunit, central domain KM417_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KM417_00020 PF02463 RecF/RecN/SMC N terminal domain KM417_00025 PF01751 Toprim domain KM417_00025 PF00204 DNA gyrase B KM417_00025 PF00986 DNA gyrase B subunit, carboxyl terminus KM417_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller KM417_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A KM417_00060 PF14175 YaaC-like Protein KM417_00065 PF00478 IMP dehydrogenase / GMP reductase domain KM417_00065 PF00571 CBS domain KM417_00070 PF00768 D-alanyl-D-alanine carboxypeptidase KM417_00070 PF07943 Penicillin-binding protein 5, C-terminal domain KM417_00075 PF01680 SOR/SNZ family KM417_00080 PF01174 SNO glutamine amidotransferase family KM417_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM417_00085 PF02403 Seryl-tRNA synthetase N-terminal domain KM417_00100 PF01712 Deoxynucleoside kinase KM417_00105 PF01712 Deoxynucleoside kinase KM417_00110 PF00857 Isochorismatase family KM417_00115 PF14437 MafB19-like deaminase KM417_00125 PF12169 DNA polymerase III subunits gamma and tau domain III KM417_00130 PF02575 YbaB/EbfC DNA-binding family KM417_00135 PF13662 Toprim domain KM417_00135 PF02132 RecR protein KM417_00140 PF10704 Protein of unknown function (DUF2508) KM417_00145 PF07441 SigmaK-factor processing regulatory protein BofA KM417_00180 PF01276 Orn/Lys/Arg decarboxylase, major domain KM417_00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM417_00185 PF02223 Thymidylate kinase KM417_00190 PF09115 DNA polymerase III, delta subunit, C terminal KM417_00195 PF04468 PSP1 C-terminal conserved region KM417_00200 PF06156 Initiation control protein YabA KM417_00205 PF05175 Methyltransferase small domain KM417_00210 PF01541 GIY-YIG catalytic domain KM417_00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM417_00220 PF18277 AbrB C-terminal domain KM417_00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM417_00225 PF08264 Anticodon-binding domain of tRNA KM417_00225 PF09334 tRNA synthetases class I (M) KM417_00225 PF01588 Putative tRNA binding domain KM417_00230 PF01026 TatD related DNase KM417_00235 PF13331 Domain of unknown function (DUF4093) KM417_00235 PF13662 Toprim domain KM417_00240 PF00398 Ribosomal RNA adenine dimethylase KM417_00245 PF05582 YabG peptidase U57 KM417_00250 PF06257 Biofilm formation stimulator VEG KM417_00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM417_00260 PF00288 GHMP kinases N terminal domain KM417_00260 PF08544 GHMP kinases C terminal KM417_00265 PF09182 Bacterial purine repressor, N-terminal KM417_00265 PF00156 Phosphoribosyl transferase domain KM417_00270 PF01042 Endoribonuclease L-PSP KM417_00275 PF04026 SpoVG KM417_00280 PF00483 Nucleotidyl transferase KM417_00280 PF00132 Bacterial transferase hexapeptide (six repeats) KM417_00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KM417_00285 PF14572 Phosphoribosyl synthetase-associated domain KM417_00290 PF01195 Peptidyl-tRNA hydrolase KM417_00300 PF02559 CarD-like/TRCF domain KM417_00300 PF00270 DEAD/DEAH box helicase KM417_00300 PF03461 TRCF domain KM417_00300 PF17757 UvrB interaction domain KM417_00300 PF00271 Helicase conserved C-terminal domain KM417_00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM417_00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor KM417_00310 PF01943 Polysaccharide biosynthesis protein KM417_00310 PF14667 Polysaccharide biosynthesis C-terminal domain KM417_00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM417_00315 PF03819 MazG nucleotide pyrophosphohydrolase domain KM417_00320 PF01479 S4 domain KM417_00325 PF07873 YabP family KM417_00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) KM417_00340 PF00575 S1 RNA binding domain KM417_00355 PF07228 Stage II sporulation protein E (SpoIIE) KM417_00360 PF09179 TilS substrate binding domain KM417_00360 PF01171 PP-loop family KM417_00360 PF11734 TilS substrate C-terminal domain KM417_00365 PF00156 Phosphoribosyl transferase domain KM417_00370 PF17862 AAA+ lid domain KM417_00370 PF00004 ATPase family associated with various cellular activities (AAA) KM417_00370 PF01434 Peptidase family M41 KM417_00370 PF06480 FtsH Extracellular KM417_00375 PF03309 Type III pantothenate kinase KM417_00380 PF01430 Hsp33 protein KM417_00385 PF00291 Pyridoxal-phosphate dependent enzyme KM417_00390 PF04715 Anthranilate synthase component I, N terminal region KM417_00390 PF00425 chorismate binding enzyme KM417_00395 PF00117 Glutamine amidotransferase class-I KM417_00400 PF01063 Amino-transferase class IV KM417_00405 PF00809 Pterin binding enzyme KM417_00410 PF02152 Dihydroneopterin aldolase KM417_00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KM417_00420 PF01381 Helix-turn-helix KM417_00425 PF01207 Dihydrouridine synthase (Dus) KM417_00430 PF01336 OB-fold nucleic acid binding domain KM417_00430 PF00152 tRNA synthetases class II (D, K and N) KM417_00450 PF17727 CtsR C-terminal dimerization domain KM417_00450 PF05848 CtsR N-terminal HTH domain KM417_00455 PF02151 UvrB/uvrC motif KM417_00460 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KM417_00465 PF00004 ATPase family associated with various cellular activities (AAA) KM417_00465 PF17871 AAA lid domain KM417_00465 PF07724 AAA domain (Cdc48 subfamily) KM417_00465 PF02861 Clp amino terminal domain, pathogenicity island component KM417_00465 PF10431 C-terminal, D2-small domain, of ClpB protein KM417_00470 PF18073 Rubredoxin metal binding domain KM417_00475 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM417_00475 PF10635 DisA bacterial checkpoint controller linker region KM417_00485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KM417_00490 PF02542 YgbB family KM417_00495 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM417_00500 PF06426 Serine acetyltransferase, N-terminal KM417_00500 PF00132 Bacterial transferase hexapeptide (six repeats) KM417_00505 PF01406 tRNA synthetases class I (C) catalytic domain KM417_00505 PF09190 DALR domain KM417_00510 PF00636 Ribonuclease III domain KM417_00515 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM417_00515 PF00588 SpoU rRNA Methylase family KM417_00520 PF05991 YacP-like NYN domain KM417_00525 PF08281 Sigma-70, region 4 KM417_00525 PF04542 Sigma-70 region 2 KM417_00530 PF00471 Ribosomal protein L33 KM417_00535 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KM417_00540 PF00467 KOW motif KM417_00540 PF02357 Transcription termination factor nusG KM417_00545 PF03946 Ribosomal protein L11, N-terminal domain KM417_00545 PF00298 Ribosomal protein L11, RNA binding domain KM417_00550 PF00687 Ribosomal protein L1p/L10e family KM417_00555 PF00466 Ribosomal protein L10 KM417_00560 PF00542 Ribosomal protein L7/L12 C-terminal domain KM417_00560 PF16320 Ribosomal protein L7/L12 dimerisation domain KM417_00565 PF05175 Methyltransferase small domain KM417_00570 PF04561 RNA polymerase Rpb2, domain 2 KM417_00570 PF04565 RNA polymerase Rpb2, domain 3 KM417_00570 PF10385 RNA polymerase beta subunit external 1 domain KM417_00570 PF00562 RNA polymerase Rpb2, domain 6 KM417_00570 PF04560 RNA polymerase Rpb2, domain 7 KM417_00570 PF04563 RNA polymerase beta subunit KM417_00575 PF04997 RNA polymerase Rpb1, domain 1 KM417_00575 PF04998 RNA polymerase Rpb1, domain 5 KM417_00575 PF05000 RNA polymerase Rpb1, domain 4 KM417_00575 PF04983 RNA polymerase Rpb1, domain 3 KM417_00575 PF00623 RNA polymerase Rpb1, domain 2 KM417_00580 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM417_00585 PF00164 Ribosomal protein S12/S23 KM417_00590 PF00177 Ribosomal protein S7p/S5e KM417_00595 PF14492 Elongation Factor G, domain II KM417_00595 PF00679 Elongation factor G C-terminus KM417_00595 PF03764 Elongation factor G, domain IV KM417_00595 PF03144 Elongation factor Tu domain 2 KM417_00595 PF00009 Elongation factor Tu GTP binding domain KM417_00600 PF03143 Elongation factor Tu C-terminal domain KM417_00600 PF03144 Elongation factor Tu domain 2 KM417_00600 PF00009 Elongation factor Tu GTP binding domain KM417_00605 PF00338 Ribosomal protein S10p/S20e KM417_00610 PF00297 Ribosomal protein L3 KM417_00615 PF00573 Ribosomal protein L4/L1 family KM417_00620 PF00276 Ribosomal protein L23 KM417_00625 PF00181 Ribosomal Proteins L2, RNA binding domain KM417_00625 PF03947 Ribosomal Proteins L2, C-terminal domain KM417_00630 PF00203 Ribosomal protein S19 KM417_00635 PF00237 Ribosomal protein L22p/L17e KM417_00640 PF07650 KH domain KM417_00640 PF00189 Ribosomal protein S3, C-terminal domain KM417_00645 PF00252 Ribosomal protein L16p/L10e KM417_00650 PF00831 Ribosomal L29 protein KM417_00655 PF00366 Ribosomal protein S17 KM417_00660 PF00238 Ribosomal protein L14p/L23e KM417_00665 PF00467 KOW motif KM417_00665 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KM417_00670 PF00281 Ribosomal protein L5 KM417_00670 PF00673 ribosomal L5P family C-terminus KM417_00675 PF00253 Ribosomal protein S14p/S29e KM417_00680 PF00410 Ribosomal protein S8 KM417_00685 PF00347 Ribosomal protein L6 KM417_00690 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KM417_00695 PF03719 Ribosomal protein S5, C-terminal domain KM417_00695 PF00333 Ribosomal protein S5, N-terminal domain KM417_00700 PF00327 Ribosomal protein L30p/L7e KM417_00705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KM417_00710 PF00344 SecY translocase KM417_00715 PF05191 Adenylate kinase, active site lid KM417_00720 PF00557 Metallopeptidase family M24 KM417_00725 PF01176 Translation initiation factor 1A / IF-1 KM417_00730 PF00444 Ribosomal protein L36 KM417_00735 PF00416 Ribosomal protein S13/S18 KM417_00740 PF00411 Ribosomal protein S11 KM417_00745 PF01000 RNA polymerase Rpb3/RpoA insert domain KM417_00745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KM417_00745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KM417_00750 PF01196 Ribosomal protein L17 KM417_00755 PF00005 ABC transporter KM417_00760 PF00005 ABC transporter KM417_00765 PF02361 Cobalt transport protein KM417_00770 PF01416 tRNA pseudouridine synthase KM417_00775 PF00572 Ribosomal protein L13 KM417_00780 PF00380 Ribosomal protein S9/S16 KM417_00790 PF01520 N-acetylmuramoyl-L-alanine amidase KM417_00795 PF10609 NUBPL iron-transfer P-loop NTPase KM417_00800 PF17898 Spore germination GerD central core domain KM417_00805 PF14089 KinB-signalling pathway activation in sporulation KM417_00810 PF01522 Polysaccharide deacetylase KM417_00885 PF00491 Arginase family KM417_00890 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM417_00895 PF07949 YbbR-like protein KM417_00900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM417_00900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM417_00900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM417_00900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM417_00910 PF01380 SIS domain KM417_00915 PF00561 alpha/beta hydrolase fold KM417_00920 PF00392 Bacterial regulatory proteins, gntR family KM417_00920 PF07729 FCD domain KM417_00930 PF02447 GntP family permease KM417_00935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM417_00935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM417_00940 PF00326 Prolyl oligopeptidase family KM417_00940 PF07676 WD40-like Beta Propeller Repeat KM417_00975 PF00528 Binding-protein-dependent transport system inner membrane component KM417_00980 PF00005 ABC transporter KM417_00980 PF09383 NIL domain KM417_00985 PF03180 NLPA lipoprotein KM417_00990 PF00107 Zinc-binding dehydrogenase KM417_00990 PF08240 Alcohol dehydrogenase GroES-like domain KM417_01000 PF01565 FAD binding domain KM417_01005 PF07690 Major Facilitator Superfamily KM417_01015 PF07690 Major Facilitator Superfamily KM417_01030 PF00528 Binding-protein-dependent transport system inner membrane component KM417_01035 PF12911 N-terminal TM domain of oligopeptide transport permease C KM417_01035 PF00528 Binding-protein-dependent transport system inner membrane component KM417_01040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM417_01040 PF00005 ABC transporter KM417_01045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM417_01045 PF00005 ABC transporter KM417_01050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_01060 PF12833 Helix-turn-helix domain KM417_01075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_01080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_01085 PF00248 Aldo/keto reductase family KM417_01090 PF03807 NADP oxidoreductase coenzyme F420-dependent KM417_01090 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM417_01095 PF04973 Nicotinamide mononucleotide transporter KM417_01100 PF06800 Sugar transport protein KM417_01105 PF00528 Binding-protein-dependent transport system inner membrane component KM417_01115 PF12727 PBP superfamily domain KM417_01115 PF12728 Helix-turn-helix domain KM417_01125 PF03466 LysR substrate binding domain KM417_01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM417_01130 PF00892 EamA-like transporter family KM417_01135 PF14142 YrzO-like protein KM417_01145 PF01553 Acyltransferase KM417_01155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM417_01155 PF00356 Bacterial regulatory proteins, lacI family KM417_01165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM417_01165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM417_01175 PF01026 TatD related DNase KM417_01180 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KM417_01205 PF12848 ABC transporter KM417_01205 PF16326 ABC transporter C-terminal domain KM417_01205 PF00005 ABC transporter KM417_01220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_01225 PF00528 Binding-protein-dependent transport system inner membrane component KM417_01230 PF12911 N-terminal TM domain of oligopeptide transport permease C KM417_01230 PF00528 Binding-protein-dependent transport system inner membrane component KM417_01235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM417_01235 PF00005 ABC transporter KM417_01240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM417_01240 PF00005 ABC transporter KM417_01275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM417_01280 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM417_01290 PF07690 Major Facilitator Superfamily KM417_01300 PF01225 Mur ligase family, catalytic domain KM417_01300 PF02875 Mur ligase family, glutamate ligase domain KM417_01300 PF08245 Mur ligase middle domain KM417_01305 PF00270 DEAD/DEAH box helicase KM417_01305 PF00271 Helicase conserved C-terminal domain KM417_01310 PF03851 UV-endonuclease UvdE KM417_01315 PF01694 Rhomboid family KM417_01320 PF01648 4'-phosphopantetheinyl transferase superfamily KM417_01330 PF00842 Alanine racemase, C-terminal domain KM417_01330 PF01168 Alanine racemase, N-terminal domain KM417_01335 PF01402 Ribbon-helix-helix protein, copG family KM417_01340 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KM417_01345 PF17674 HHH domain KM417_01345 PF00575 S1 RNA binding domain KM417_01345 PF09371 Tex-like protein N-terminal domain KM417_01345 PF16921 Tex protein YqgF-like domain KM417_01355 PF10263 SprT-like family KM417_01355 PF17283 SprT-like zinc ribbon domain KM417_01440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KM417_01445 PF00814 Glycoprotease family KM417_01450 PF00583 Acetyltransferase (GNAT) family KM417_01455 PF00814 Glycoprotease family KM417_01460 PF12848 ABC transporter KM417_01460 PF00005 ABC transporter KM417_01460 PF16326 ABC transporter C-terminal domain KM417_01465 PF02629 CoA binding domain KM417_01465 PF06971 Putative DNA-binding protein N-terminus KM417_01475 PF02517 CPBP intramembrane metalloprotease KM417_01480 PF00166 Chaperonin 10 Kd subunit KM417_01485 PF00118 TCP-1/cpn60 chaperonin family KM417_01490 PF02540 NAD synthase KM417_01490 PF00958 GMP synthase C terminal domain KM417_01490 PF00117 Glutamine amidotransferase class-I KM417_01495 PF00860 Permease family KM417_01500 PF00072 Response regulator receiver domain KM417_01500 PF00486 Transcriptional regulatory protein, C terminal KM417_01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_01505 PF00512 His Kinase A (phospho-acceptor) domain KM417_01505 PF00989 PAS fold KM417_01505 PF16736 Single Cache-like KM417_01535 PF08241 Methyltransferase domain KM417_01575 PF02673 Bacitracin resistance protein BacA KM417_01585 PF00005 ABC transporter KM417_01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_01590 PF00512 His Kinase A (phospho-acceptor) domain KM417_01595 PF00072 Response regulator receiver domain KM417_01595 PF00486 Transcriptional regulatory protein, C terminal KM417_01615 PF00731 AIR carboxylase KM417_01620 PF02222 ATP-grasp domain KM417_01620 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KM417_01625 PF00206 Lyase KM417_01625 PF10397 Adenylosuccinate lyase C-terminus KM417_01630 PF01259 SAICAR synthetase KM417_01635 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KM417_01645 PF00586 AIR synthase related protein, N-terminal domain KM417_01645 PF02769 AIR synthase related protein, C-terminal domain KM417_01645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KM417_01650 PF00156 Phosphoribosyl transferase domain KM417_01655 PF00586 AIR synthase related protein, N-terminal domain KM417_01655 PF02769 AIR synthase related protein, C-terminal domain KM417_01660 PF00551 Formyl transferase KM417_01665 PF02142 MGS-like domain KM417_01665 PF01808 AICARFT/IMPCHase bienzyme KM417_01670 PF02844 Phosphoribosylglycinamide synthetase, N domain KM417_01670 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KM417_01670 PF02843 Phosphoribosylglycinamide synthetase, C domain KM417_01690 PF01884 PcrB family KM417_01695 PF00580 UvrD/REP helicase N-terminal domain KM417_01695 PF13361 UvrD-like helicase C-terminal domain KM417_01700 PF12826 Helix-hairpin-helix motif KM417_01700 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KM417_01700 PF00533 BRCA1 C Terminus (BRCT) domain KM417_01700 PF01653 NAD-dependent DNA ligase adenylation domain KM417_01700 PF03120 NAD-dependent DNA ligase OB-fold domain KM417_01705 PF07537 CamS sex pheromone cAM373 precursor KM417_01710 PF01925 Sulfite exporter TauE/SafE KM417_01715 PF00171 Aldehyde dehydrogenase family KM417_01725 PF00857 Isochorismatase family KM417_01730 PF00005 ABC transporter KM417_01730 PF09383 NIL domain KM417_01735 PF00528 Binding-protein-dependent transport system inner membrane component KM417_01740 PF03180 NLPA lipoprotein KM417_01760 PF01047 MarR family KM417_01770 PF02686 Glu-tRNAGln amidotransferase C subunit KM417_01775 PF01425 Amidase KM417_01780 PF02637 GatB domain KM417_01780 PF02934 GatB/GatE catalytic domain KM417_01785 PF00781 Diacylglycerol kinase catalytic domain KM417_01790 PF13419 Haloacid dehalogenase-like hydrolase KM417_01795 PF00202 Aminotransferase class-III KM417_01800 PF00158 Sigma-54 interaction domain KM417_01805 PF00171 Aldehyde dehydrogenase family KM417_01810 PF00893 Small Multidrug Resistance protein KM417_01815 PF02073 Thermophilic metalloprotease (M29) KM417_01830 PF07662 Na+ dependent nucleoside transporter C-terminus KM417_01830 PF01773 Na+ dependent nucleoside transporter N-terminus KM417_01830 PF07670 Nucleoside recognition KM417_01835 PF05958 tRNA (Uracil-5-)-methyltransferase KM417_01835 PF01938 TRAM domain KM417_01835 PF02475 Met-10+ like-protein KM417_01840 PF01207 Dihydrouridine synthase (Dus) KM417_01850 PF07308 Protein of unknown function (DUF1456) KM417_01865 PF13378 Enolase C-terminal domain-like KM417_01865 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM417_01875 PF03553 Na+/H+ antiporter family KM417_01880 PF01546 Peptidase family M20/M25/M40 KM417_01880 PF07687 Peptidase dimerisation domain KM417_01890 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_01890 PF13192 Thioredoxin domain KM417_01895 PF00578 AhpC/TSA family KM417_01900 PF01636 Phosphotransferase enzyme family KM417_01905 PF01008 Initiation factor 2 subunit family KM417_01910 PF00596 Class II Aldolase and Adducin N-terminal domain KM417_01915 PF01032 FecCD transport family KM417_01920 PF01032 FecCD transport family KM417_01925 PF01497 Periplasmic binding protein KM417_01930 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_01940 PF12728 Helix-turn-helix domain KM417_01975 PF13188 PAS domain KM417_01975 PF00989 PAS fold KM417_01975 PF00512 His Kinase A (phospho-acceptor) domain KM417_01975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_01975 PF13426 PAS domain KM417_01995 PF10127 RNA repair pathway DNA polymerase beta family KM417_02000 PF07690 Major Facilitator Superfamily KM417_02005 PF01266 FAD dependent oxidoreductase KM417_02005 PF00355 Rieske [2Fe-2S] domain KM417_02015 PF00528 Binding-protein-dependent transport system inner membrane component KM417_02020 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM417_02025 PF00005 ABC transporter KM417_02030 PF12729 Four helix bundle sensory module for signal transduction KM417_02030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM417_02030 PF00672 HAMP domain KM417_02035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM417_02035 PF00672 HAMP domain KM417_02035 PF12729 Four helix bundle sensory module for signal transduction KM417_02040 PF16657 Maltogenic Amylase, C-terminal domain KM417_02040 PF00128 Alpha amylase, catalytic domain KM417_02045 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM417_02045 PF00367 phosphotransferase system, EIIB KM417_02045 PF02378 Phosphotransferase system, EIIC KM417_02050 PF03372 Endonuclease/Exonuclease/phosphatase family KM417_02055 PF01061 ABC-2 type transporter KM417_02060 PF01131 DNA topoisomerase KM417_02060 PF01751 Toprim domain KM417_02065 PF02110 Hydroxyethylthiazole kinase family KM417_02070 PF02581 Thiamine monophosphate synthase KM417_02075 PF03605 Anaerobic c4-dicarboxylate membrane transporter KM417_02080 PF00672 HAMP domain KM417_02080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM417_02085 PF01910 Thiamine-binding protein KM417_02090 PF00528 Binding-protein-dependent transport system inner membrane component KM417_02100 PF00005 ABC transporter KM417_02105 PF12848 ABC transporter KM417_02105 PF00005 ABC transporter KM417_02110 PF00704 Glycosyl hydrolases family 18 KM417_02110 PF00041 Fibronectin type III domain KM417_02130 PF00440 Bacterial regulatory proteins, tetR family KM417_02130 PF08360 QacR-like protein, C-terminal region KM417_02150 PF11700 Vacuole effluxer Atg22 like KM417_02165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM417_02165 PF09180 Prolyl-tRNA synthetase, C-terminal KM417_02165 PF03129 Anticodon binding domain KM417_02175 PF00480 ROK family KM417_02180 PF02342 TerD domain KM417_02185 PF02342 TerD domain KM417_02190 PF02342 TerD domain KM417_02195 PF03741 Integral membrane protein TerC family KM417_02200 PF14266 Putative component of 'biosynthetic module' KM417_02205 PF05816 Toxic anion resistance protein (TelA) KM417_02210 PF00689 Cation transporting ATPase, C-terminus KM417_02210 PF00690 Cation transporter/ATPase, N-terminus KM417_02215 PF06569 Protein of unknown function (DUF1128) KM417_02220 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM417_02230 PF03631 Virulence factor BrkB KM417_02240 PF00892 EamA-like transporter family KM417_02260 PF09335 SNARE associated Golgi protein KM417_02275 PF16242 Pyridoxamine 5'-phosphate oxidase like KM417_02280 PF01699 Sodium/calcium exchanger protein KM417_02285 PF14167 YfkD-like protein KM417_02290 PF08756 YfkB-like domain KM417_02290 PF04055 Radical SAM superfamily KM417_02300 PF05683 Fumarase C-terminus KM417_02300 PF05681 Fumarate hydratase (Fumerase) KM417_02305 PF01522 Polysaccharide deacetylase KM417_02315 PF00730 HhH-GPD superfamily base excision DNA repair protein KM417_02320 PF01938 TRAM domain KM417_02320 PF05958 tRNA (Uracil-5-)-methyltransferase KM417_02325 PF14659 Phage integrase, N-terminal SAM-like domain KM417_02325 PF00589 Phage integrase family KM417_02335 PF01381 Helix-turn-helix KM417_02350 PF01381 Helix-turn-helix KM417_02385 PF07319 Primosomal protein DnaI N-terminus KM417_02385 PF01695 IstB-like ATP binding protein KM417_02605 PF01183 Glycosyl hydrolases family 25 KM417_02615 PF01416 tRNA pseudouridine synthase KM417_02625 PF02954 Bacterial regulatory protein, Fis family KM417_02625 PF00158 Sigma-54 interaction domain KM417_02625 PF13426 PAS domain KM417_02635 PF00324 Amino acid permease KM417_02640 PF01546 Peptidase family M20/M25/M40 KM417_02640 PF07687 Peptidase dimerisation domain KM417_02665 PF04960 Glutaminase KM417_02670 PF02378 Phosphotransferase system, EIIC KM417_02670 PF00367 phosphotransferase system, EIIB KM417_02675 PF00144 Beta-lactamase KM417_02690 PF00535 Glycosyl transferase family 2 KM417_02695 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM417_02695 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM417_02695 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM417_02700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM417_02700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM417_02700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM417_02705 PF01370 NAD dependent epimerase/dehydratase family KM417_02705 PF02911 Formyl transferase, C-terminal domain KM417_02705 PF00551 Formyl transferase KM417_02710 PF00535 Glycosyl transferase family 2 KM417_02720 PF02901 Pyruvate formate lyase-like KM417_02720 PF01228 Glycine radical KM417_02725 PF04055 Radical SAM superfamily KM417_02730 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KM417_02730 PF04101 Glycosyltransferase family 28 C-terminal domain KM417_02745 PF01979 Amidohydrolase family KM417_02750 PF01370 NAD dependent epimerase/dehydratase family KM417_02750 PF08338 Domain of unknown function (DUF1731) KM417_02755 PF02631 RecX family KM417_02770 PF08176 Small acid-soluble spore protein K family KM417_02775 PF14043 WVELL protein KM417_02780 PF04307 LexA-binding, inner membrane-associated putative hydrolase KM417_02785 PF14815 NUDIX domain KM417_02785 PF00730 HhH-GPD superfamily base excision DNA repair protein KM417_02795 PF04259 Small, acid-soluble spore protein, gamma-type KM417_02800 PF14182 YgaB-like protein KM417_02805 PF04167 Protein of unknown function (DUF402) KM417_02810 PF00005 ABC transporter KM417_02810 PF00664 ABC transporter transmembrane region KM417_02815 PF06081 Aromatic acid exporter family member 1 KM417_02820 PF01645 Conserved region in glutamate synthase KM417_02820 PF04898 Glutamate synthase central domain KM417_02820 PF00310 Glutamine amidotransferases class-II KM417_02820 PF01493 GXGXG motif KM417_02825 PF00202 Aminotransferase class-III KM417_02830 PF00005 ABC transporter KM417_02845 PF07885 Ion channel KM417_02850 PF00578 AhpC/TSA family KM417_02855 PF01475 Ferric uptake regulator family KM417_02860 PF11023 Zinc-ribbon containing domain KM417_02960 PF01709 Transcriptional regulator KM417_02965 PF13344 Haloacid dehalogenase-like hydrolase KM417_02965 PF00293 NUDIX domain KM417_02970 PF00912 Transglycosylase KM417_02970 PF00905 Penicillin binding protein transpeptidase domain KM417_02975 PF13462 Thioredoxin KM417_02985 PF08331 Domain of unknown function (DUF1730) KM417_02990 PF12671 Putative amidase domain KM417_02995 PF00588 SpoU rRNA Methylase family KM417_03000 PF03707 Bacterial signalling protein N terminal repeat KM417_03000 PF00990 Diguanylate cyclase, GGDEF domain KM417_03000 PF00563 EAL domain KM417_03005 PF06798 PrkA serine protein kinase C-terminal domain KM417_03005 PF08298 PrkA AAA domain KM417_03010 PF04285 Protein of unknown function (DUF444) KM417_03025 PF02028 BCCT, betaine/carnitine/choline family transporter KM417_03030 PF08453 Peptidase family M9 N-terminal KM417_03030 PF01752 Collagenase KM417_03030 PF18496 Collagenase G catalytic helper subdomain KM417_03040 PF01145 SPFH domain / Band 7 family KM417_03040 PF15975 Flotillin KM417_03045 PF02743 Cache domain KM417_03045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM417_03045 PF00672 HAMP domain KM417_03050 PF17203 Single cache domain 3 KM417_03050 PF00989 PAS fold KM417_03050 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM417_03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_03055 PF12431 Transcriptional regulator KM417_03055 PF08279 HTH domain KM417_03055 PF00072 Response regulator receiver domain KM417_03060 PF03600 Citrate transporter KM417_03080 PF04309 Glycerol-3-phosphate responsive antiterminator KM417_03085 PF00005 ABC transporter KM417_03085 PF17912 MalK OB fold domain KM417_03090 PF00528 Binding-protein-dependent transport system inner membrane component KM417_03095 PF00528 Binding-protein-dependent transport system inner membrane component KM417_03100 PF13416 Bacterial extracellular solute-binding protein KM417_03105 PF00149 Calcineurin-like phosphoesterase KM417_03110 PF00072 Response regulator receiver domain KM417_03110 PF00486 Transcriptional regulatory protein, C terminal KM417_03115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_03115 PF00512 His Kinase A (phospho-acceptor) domain KM417_03125 PF13529 Peptidase_C39 like family KM417_03130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM417_03130 PF00672 HAMP domain KM417_03130 PF02743 Cache domain KM417_03135 PF17203 Single cache domain 3 KM417_03135 PF00989 PAS fold KM417_03135 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM417_03135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_03140 PF00072 Response regulator receiver domain KM417_03145 PF03390 2-hydroxycarboxylate transporter family KM417_03150 PF00390 Malic enzyme, N-terminal domain KM417_03150 PF03949 Malic enzyme, NAD binding domain KM417_03160 PF00892 EamA-like transporter family KM417_03165 PF00392 Bacterial regulatory proteins, gntR family KM417_03165 PF00155 Aminotransferase class I and II KM417_03175 PF18698 Histidine kinase sensor domain KM417_03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_03175 PF00989 PAS fold KM417_03175 PF00512 His Kinase A (phospho-acceptor) domain KM417_03175 PF00672 HAMP domain KM417_03180 PF00486 Transcriptional regulatory protein, C terminal KM417_03180 PF00072 Response regulator receiver domain KM417_03185 PF00583 Acetyltransferase (GNAT) family KM417_03185 PF13508 Acetyltransferase (GNAT) domain KM417_03190 PF02634 FdhD/NarQ family KM417_03195 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM417_03195 PF00384 Molybdopterin oxidoreductase KM417_03195 PF01568 Molydopterin dinucleotide binding domain KM417_03195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM417_03195 PF00037 4Fe-4S binding domain KM417_03200 PF07849 Protein of unknown function (DUF1641) KM417_03210 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM417_03210 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM417_03215 PF13520 Amino acid permease KM417_03220 PF01022 Bacterial regulatory protein, arsR family KM417_03225 PF00403 Heavy-metal-associated domain KM417_03230 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KM417_03230 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KM417_03230 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KM417_03245 PF03413 Peptidase propeptide and YPEB domain KM417_03245 PF01447 Thermolysin metallopeptidase, catalytic domain KM417_03245 PF07504 Fungalysin/Thermolysin Propeptide Motif KM417_03245 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM417_03265 PF04294 VanW like protein KM417_03270 PF03816 Cell envelope-related transcriptional attenuator domain KM417_03275 PF01773 Na+ dependent nucleoside transporter N-terminus KM417_03275 PF07662 Na+ dependent nucleoside transporter C-terminus KM417_03280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM417_03285 PF00571 CBS domain KM417_03285 PF03471 Transporter associated domain KM417_03285 PF01595 Cyclin M transmembrane N-terminal domain KM417_03290 PF00206 Lyase KM417_03290 PF10415 Fumarase C C-terminus KM417_03295 PF02652 L-lactate permease KM417_03300 PF01022 Bacterial regulatory protein, arsR family KM417_03305 PF08141 Small acid-soluble spore protein H family KM417_03310 PF00854 POT family KM417_03315 PF01497 Periplasmic binding protein KM417_03320 PF01032 FecCD transport family KM417_03325 PF01032 FecCD transport family KM417_03330 PF00005 ABC transporter KM417_03335 PF08241 Methyltransferase domain KM417_03340 PF00155 Aminotransferase class I and II KM417_03345 PF01370 NAD dependent epimerase/dehydratase family KM417_03350 PF00293 NUDIX domain KM417_03350 PF13344 Haloacid dehalogenase-like hydrolase KM417_03355 PF00092 von Willebrand factor type A domain KM417_03360 PF07728 AAA domain (dynein-related subfamily) KM417_03365 PF13091 PLD-like domain KM417_03365 PF13396 Phospholipase_D-nuclease N-terminal KM417_03380 PF00563 EAL domain KM417_03380 PF00990 Diguanylate cyclase, GGDEF domain KM417_03380 PF03707 Bacterial signalling protein N terminal repeat KM417_03385 PF13520 Amino acid permease KM417_03390 PF00392 Bacterial regulatory proteins, gntR family KM417_03390 PF07702 UTRA domain KM417_03395 PF00367 phosphotransferase system, EIIB KM417_03395 PF02378 Phosphotransferase system, EIIC KM417_03400 PF00128 Alpha amylase, catalytic domain KM417_03400 PF16657 Maltogenic Amylase, C-terminal domain KM417_03415 PF03323 Bacillus/Clostridium GerA spore germination protein KM417_03425 PF01636 Phosphotransferase enzyme family KM417_03430 PF01235 Sodium:alanine symporter family KM417_03435 PF00005 ABC transporter KM417_03440 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM417_03445 PF00528 Binding-protein-dependent transport system inner membrane component KM417_03450 PF00528 Binding-protein-dependent transport system inner membrane component KM417_03455 PF00324 Amino acid permease KM417_03480 PF13280 WYL domain KM417_03480 PF08279 HTH domain KM417_03485 PF01872 RibD C-terminal domain KM417_03490 PF00512 His Kinase A (phospho-acceptor) domain KM417_03490 PF00989 PAS fold KM417_03490 PF18698 Histidine kinase sensor domain KM417_03490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_03490 PF00672 HAMP domain KM417_03495 PF00486 Transcriptional regulatory protein, C terminal KM417_03495 PF00072 Response regulator receiver domain KM417_03505 PF00916 Sulfate permease family KM417_03505 PF01740 STAS domain KM417_03510 PF00582 Universal stress protein family KM417_03520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_03525 PF00528 Binding-protein-dependent transport system inner membrane component KM417_03530 PF00528 Binding-protein-dependent transport system inner membrane component KM417_03535 PF00005 ABC transporter KM417_03535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM417_03540 PF00005 ABC transporter KM417_03540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM417_03545 PF07690 Major Facilitator Superfamily KM417_03550 PF01047 MarR family KM417_03560 PF00356 Bacterial regulatory proteins, lacI family KM417_03565 PF00294 pfkB family carbohydrate kinase KM417_03570 PF05025 RbsD / FucU transport protein family KM417_03575 PF00005 ABC transporter KM417_03580 PF02653 Branched-chain amino acid transport system / permease component KM417_03585 PF13407 Periplasmic binding protein domain KM417_03590 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM417_03595 PF05547 Immune inhibitor A peptidase M6 KM417_03610 PF08240 Alcohol dehydrogenase GroES-like domain KM417_03610 PF00107 Zinc-binding dehydrogenase KM417_03620 PF00882 Zinc dependent phospholipase C KM417_03625 PF03372 Endonuclease/Exonuclease/phosphatase family KM417_03650 PF02673 Bacitracin resistance protein BacA KM417_03655 PF02743 Cache domain KM417_03655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM417_03655 PF00672 HAMP domain KM417_03660 PF01476 LysM domain KM417_03660 PF06725 3D domain KM417_03665 PF01381 Helix-turn-helix KM417_03675 PF04203 Sortase domain KM417_03680 PF00854 POT family KM417_03685 PF05525 Branched-chain amino acid transport protein KM417_03700 PF00324 Amino acid permease KM417_03705 PF00860 Permease family KM417_03730 PF00999 Sodium/hydrogen exchanger family KM417_03730 PF02080 TrkA-C domain KM417_03730 PF02254 TrkA-N domain KM417_03740 PF00510 Cytochrome c oxidase subunit III KM417_03745 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM417_03750 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM417_03755 PF00324 Amino acid permease KM417_03760 PF13529 Peptidase_C39 like family KM417_03765 PF01546 Peptidase family M20/M25/M40 KM417_03765 PF07687 Peptidase dimerisation domain KM417_03770 PF11755 Protein of unknown function (DUF3311) KM417_03775 PF00474 Sodium:solute symporter family KM417_03780 PF03323 Bacillus/Clostridium GerA spore germination protein KM417_03785 PF03845 Spore germination protein KM417_03790 PF05504 Spore germination B3/ GerAC like, C-terminal KM417_03795 PF07670 Nucleoside recognition KM417_03795 PF07664 Ferrous iron transport protein B C terminus KM417_03795 PF17910 FeoB cytosolic helical domain KM417_03795 PF02421 Ferrous iron transport protein B KM417_03800 PF02421 Ferrous iron transport protein B KM417_03800 PF17910 FeoB cytosolic helical domain KM417_03800 PF07664 Ferrous iron transport protein B C terminus KM417_03800 PF07670 Nucleoside recognition KM417_03805 PF07670 Nucleoside recognition KM417_03805 PF17910 FeoB cytosolic helical domain KM417_03805 PF02421 Ferrous iron transport protein B KM417_03805 PF04023 FeoA domain KM417_03805 PF07664 Ferrous iron transport protein B C terminus KM417_03810 PF12849 PBP superfamily domain KM417_03815 PF00528 Binding-protein-dependent transport system inner membrane component KM417_03820 PF00528 Binding-protein-dependent transport system inner membrane component KM417_03830 PF00873 AcrB/AcrD/AcrF family KM417_03950 PF00571 CBS domain KM417_03965 PF08239 Bacterial SH3 domain KM417_03965 PF00246 Zinc carboxypeptidase KM417_03970 PF03070 TENA/THI-4/PQQC family KM417_03975 PF00005 ABC transporter KM417_03980 PF00528 Binding-protein-dependent transport system inner membrane component KM417_03985 PF09084 NMT1/THI5 like KM417_03990 PF02581 Thiamine monophosphate synthase KM417_03995 PF01266 FAD dependent oxidoreductase KM417_04000 PF02597 ThiS family KM417_04005 PF05690 Thiazole biosynthesis protein ThiG KM417_04010 PF00899 ThiF family KM417_04015 PF08543 Phosphomethylpyrimidine kinase KM417_04040 PF03814 Potassium-transporting ATPase A subunit KM417_04050 PF02669 K+-transporting ATPase, c chain KM417_04055 PF02702 Osmosensitive K+ channel His kinase sensor domain KM417_04060 PF07690 Major Facilitator Superfamily KM417_04065 PF01047 MarR family KM417_04080 PF00860 Permease family KM417_04100 PF00294 pfkB family carbohydrate kinase KM417_04105 PF00251 Glycosyl hydrolases family 32 N-terminal domain KM417_04105 PF08244 Glycosyl hydrolases family 32 C terminal KM417_04110 PF02378 Phosphotransferase system, EIIC KM417_04110 PF00367 phosphotransferase system, EIIB KM417_04115 PF00356 Bacterial regulatory proteins, lacI family KM417_04115 PF13407 Periplasmic binding protein domain KM417_04125 PF00085 Thioredoxin KM417_04130 PF02600 Disulfide bond formation protein DsbB KM417_04135 PF14148 YhdB-like protein KM417_04155 PF03323 Bacillus/Clostridium GerA spore germination protein KM417_04165 PF00881 Nitroreductase family KM417_04170 PF04293 SpoVR like protein KM417_04195 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_04195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM417_04200 PF02583 Metal-sensitive transcriptional repressor KM417_04205 PF00581 Rhodanese-like domain KM417_04205 PF01206 Sulfurtransferase TusA KM417_04210 PF00753 Metallo-beta-lactamase superfamily KM417_04210 PF00581 Rhodanese-like domain KM417_04215 PF01206 Sulfurtransferase TusA KM417_04220 PF00581 Rhodanese-like domain KM417_04230 PF13686 DsrE/DsrF/DrsH-like family KM417_04235 PF01925 Sulfite exporter TauE/SafE KM417_04245 PF03816 Cell envelope-related transcriptional attenuator domain KM417_04250 PF08240 Alcohol dehydrogenase GroES-like domain KM417_04250 PF00107 Zinc-binding dehydrogenase KM417_04255 PF02690 Na+/Pi-cotransporter KM417_04260 PF07690 Major Facilitator Superfamily KM417_04270 PF08279 HTH domain KM417_04270 PF05043 Mga helix-turn-helix domain KM417_04270 PF00874 PRD domain KM417_04270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM417_04275 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM417_04280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM417_04285 PF02378 Phosphotransferase system, EIIC KM417_04300 PF06725 3D domain KM417_04300 PF01476 LysM domain KM417_04305 PF12704 MacB-like periplasmic core domain KM417_04305 PF02687 FtsX-like permease family KM417_04310 PF00005 ABC transporter KM417_04320 PF09529 Integral membrane protein (intg_mem_TP0381) KM417_04335 PF05525 Branched-chain amino acid transport protein KM417_04340 PF05067 Manganese containing catalase KM417_04345 PF12652 CotJB protein KM417_04350 PF11007 Spore coat associated protein JA (CotJA) KM417_04365 PF02735 Ku70/Ku80 beta-barrel domain KM417_04375 PF09335 SNARE associated Golgi protein KM417_04410 PF13520 Amino acid permease KM417_04415 PF00999 Sodium/hydrogen exchanger family KM417_04425 PF01418 Helix-turn-helix domain, rpiR family KM417_04425 PF01380 SIS domain KM417_04430 PF01380 SIS domain KM417_04435 PF00367 phosphotransferase system, EIIB KM417_04435 PF02378 Phosphotransferase system, EIIC KM417_04445 PF07681 DoxX KM417_04460 PF00892 EamA-like transporter family KM417_04465 PF01037 Lrp/AsnC ligand binding domain KM417_04475 PF00893 Small Multidrug Resistance protein KM417_04480 PF00893 Small Multidrug Resistance protein KM417_04485 PF00440 Bacterial regulatory proteins, tetR family KM417_04485 PF17934 Tetracyclin repressor-like, C-terminal domain KM417_04490 PF07690 Major Facilitator Superfamily KM417_04495 PF01638 HxlR-like helix-turn-helix KM417_04505 PF02525 Flavodoxin-like fold KM417_04510 PF12793 Sugar transport-related sRNA regulator N-term KM417_04510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_04515 PF07690 Major Facilitator Superfamily KM417_04525 PF01965 DJ-1/PfpI family KM417_04530 PF06628 Catalase-related immune-responsive KM417_04530 PF18011 C-terminal domain found in long catalases KM417_04530 PF00199 Catalase KM417_04540 PF13520 Amino acid permease KM417_04545 PF01177 Asp/Glu/Hydantoin racemase KM417_04555 PF00171 Aldehyde dehydrogenase family KM417_04560 PF00664 ABC transporter transmembrane region KM417_04560 PF00005 ABC transporter KM417_04570 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM417_04575 PF00528 Binding-protein-dependent transport system inner membrane component KM417_04580 PF00005 ABC transporter KM417_04585 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM417_04595 PF14398 YheC/D like ATP-grasp KM417_04605 PF04286 Protein of unknown function (DUF445) KM417_04610 PF06133 Control of competence regulator ComK, YlbF/YmcA KM417_04625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM417_04625 PF00205 Thiamine pyrophosphate enzyme, central domain KM417_04625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM417_04630 PF03306 Alpha-acetolactate decarboxylase KM417_04640 PF02245 Methylpurine-DNA glycosylase (MPG) KM417_04660 PF04055 Radical SAM superfamily KM417_04665 PF13193 AMP-binding enzyme C-terminal domain KM417_04665 PF00501 AMP-binding enzyme KM417_04675 PF00916 Sulfate permease family KM417_04675 PF01740 STAS domain KM417_04695 PF07517 SecA DEAD-like domain KM417_04695 PF07516 SecA Wing and Scaffold domain KM417_04695 PF01043 SecA preprotein cross-linking domain KM417_04700 PF14667 Polysaccharide biosynthesis C-terminal domain KM417_04700 PF01943 Polysaccharide biosynthesis protein KM417_04710 PF02368 Bacterial Ig-like domain (group 2) KM417_04710 PF13205 Bacterial Ig-like domain KM417_04710 PF00395 S-layer homology domain KM417_04715 PF00395 S-layer homology domain KM417_04725 PF03062 MBOAT, membrane-bound O-acyltransferase family KM417_04730 PF03062 MBOAT, membrane-bound O-acyltransferase family KM417_04745 PF00378 Enoyl-CoA hydratase/isomerase KM417_04765 PF05343 M42 glutamyl aminopeptidase KM417_04770 PF00395 S-layer homology domain KM417_04770 PF01520 N-acetylmuramoyl-L-alanine amidase KM417_04785 PF05544 Proline racemase KM417_04790 PF02423 Ornithine cyclodeaminase/mu-crystallin family KM417_04820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_04825 PF00528 Binding-protein-dependent transport system inner membrane component KM417_04830 PF12911 N-terminal TM domain of oligopeptide transport permease C KM417_04830 PF00528 Binding-protein-dependent transport system inner membrane component KM417_04840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM417_04840 PF00005 ABC transporter KM417_04845 PF01541 GIY-YIG catalytic domain KM417_04875 PF00083 Sugar (and other) transporter KM417_04880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_04880 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM417_04885 PF08279 HTH domain KM417_04885 PF12431 Transcriptional regulator KM417_04885 PF00072 Response regulator receiver domain KM417_04890 PF03401 Tripartite tricarboxylate transporter family receptor KM417_04895 PF02342 TerD domain KM417_04920 PF13411 MerR HTH family regulatory protein KM417_04920 PF06445 GyrI-like small molecule binding domain KM417_04935 PF00772 DnaB-like helicase N terminal domain KM417_04935 PF03796 DnaB-like helicase C terminal domain KM417_04960 PF01925 Sulfite exporter TauE/SafE KM417_04975 PF07690 Major Facilitator Superfamily KM417_05020 PF00550 Phosphopantetheine attachment site KM417_05020 PF07993 Male sterility protein KM417_05025 PF18665 Tetracyclin repressor-like, C-terminal domain KM417_05025 PF00440 Bacterial regulatory proteins, tetR family KM417_05045 PF01066 CDP-alcohol phosphatidyltransferase KM417_05065 PF02733 Dak1 domain KM417_05075 PF02733 Dak1 domain KM417_05080 PF02525 Flavodoxin-like fold KM417_05085 PF02082 Transcriptional regulator KM417_05115 PF01966 HD domain KM417_05115 PF00672 HAMP domain KM417_05135 PF00395 S-layer homology domain KM417_05160 PF11181 Heat induced stress protein YflT KM417_05165 PF05532 CsbD-like KM417_05180 PF01740 STAS domain KM417_05185 PF13581 Histidine kinase-like ATPase domain KM417_05190 PF04542 Sigma-70 region 2 KM417_05190 PF04545 Sigma-70, region 4 KM417_05190 PF04539 Sigma-70 region 3 KM417_05200 PF07228 Stage II sporulation protein E (SpoIIE) KM417_05200 PF13426 PAS domain KM417_05205 PF01739 CheR methyltransferase, SAM binding domain KM417_05205 PF03705 CheR methyltransferase, all-alpha domain KM417_05210 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM417_05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_05210 PF00512 His Kinase A (phospho-acceptor) domain KM417_05210 PF01627 Hpt domain KM417_05210 PF00072 Response regulator receiver domain KM417_05235 PF01906 Putative heavy-metal-binding KM417_05245 PF08240 Alcohol dehydrogenase GroES-like domain KM417_05245 PF00107 Zinc-binding dehydrogenase KM417_05250 PF11121 Protein of unknown function (DUF2639) KM417_05265 PF00149 Calcineurin-like phosphoesterase KM417_05270 PF13514 AAA domain KM417_05275 PF07282 Putative transposase DNA-binding domain KM417_05275 PF12323 Helix-turn-helix domain KM417_05275 PF01385 Probable transposase KM417_05285 PF01336 OB-fold nucleic acid binding domain KM417_05285 PF01966 HD domain KM417_05290 PF00440 Bacterial regulatory proteins, tetR family KM417_05295 PF07690 Major Facilitator Superfamily KM417_05300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM417_05310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM417_05315 PF18801 response regulator aspartate phosphatase H, N terminal KM417_05320 PF00561 alpha/beta hydrolase fold KM417_05320 PF08386 TAP-like protein KM417_05340 PF04309 Glycerol-3-phosphate responsive antiterminator KM417_05345 PF00230 Major intrinsic protein KM417_05350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM417_05350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM417_05355 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KM417_05355 PF01266 FAD dependent oxidoreductase KM417_05370 PF04542 Sigma-70 region 2 KM417_05370 PF08281 Sigma-70, region 4 KM417_05395 PF07690 Major Facilitator Superfamily KM417_05400 PF07690 Major Facilitator Superfamily KM417_05410 PF13538 UvrD-like helicase C-terminal domain KM417_05430 PF01047 MarR family KM417_05435 PF12732 YtxH-like protein KM417_05440 PF01230 HIT domain KM417_05445 PF00005 ABC transporter KM417_05450 PF05975 Bacterial ABC transporter protein EcsB KM417_05455 PF12787 EcsC protein family KM417_05465 PF00440 Bacterial regulatory proteins, tetR family KM417_05465 PF17934 Tetracyclin repressor-like, C-terminal domain KM417_05475 PF03703 Bacterial PH domain KM417_05525 PF03703 Bacterial PH domain KM417_05530 PF03703 Bacterial PH domain KM417_05535 PF03992 Antibiotic biosynthesis monooxygenase KM417_05540 PF00905 Penicillin binding protein transpeptidase domain KM417_05540 PF00912 Transglycosylase KM417_05545 PF01208 Uroporphyrinogen decarboxylase (URO-D) KM417_05550 PF00762 Ferrochelatase KM417_05555 PF01593 Flavin containing amine oxidoreductase KM417_05580 PF03965 Penicillinase repressor KM417_05590 PF17932 Tetracyclin repressor-like, C-terminal domain KM417_05590 PF00440 Bacterial regulatory proteins, tetR family KM417_05620 PF00356 Bacterial regulatory proteins, lacI family KM417_05625 PF14149 YhfH-like protein KM417_05630 PF12706 Beta-lactamase superfamily domain KM417_05635 PF10437 Bacterial lipoate protein ligase C-terminus KM417_05635 PF03099 Biotin/lipoate A/B protein ligase family KM417_05645 PF13193 AMP-binding enzyme C-terminal domain KM417_05645 PF00501 AMP-binding enzyme KM417_05655 PF01520 N-acetylmuramoyl-L-alanine amidase KM417_05655 PF00395 S-layer homology domain KM417_05660 PF05593 RHS Repeat KM417_05675 PF05593 RHS Repeat KM417_05715 PF01966 HD domain KM417_05725 PF04542 Sigma-70 region 2 KM417_05725 PF08281 Sigma-70, region 4 KM417_05730 PF06445 GyrI-like small molecule binding domain KM417_05730 PF12833 Helix-turn-helix domain KM417_05745 PF00512 His Kinase A (phospho-acceptor) domain KM417_05745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_05750 PF00486 Transcriptional regulatory protein, C terminal KM417_05750 PF00072 Response regulator receiver domain KM417_05775 PF01435 Peptidase family M48 KM417_05775 PF16491 CAAX prenyl protease N-terminal, five membrane helices KM417_05780 PF00672 HAMP domain KM417_05780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM417_05780 PF02743 Cache domain KM417_05785 PF00892 EamA-like transporter family KM417_05790 PF03424 Carbohydrate binding domain (family 17/28) KM417_05790 PF00150 Cellulase (glycosyl hydrolase family 5) KM417_05790 PF00395 S-layer homology domain KM417_05800 PF00395 S-layer homology domain KM417_05805 PF01274 Malate synthase KM417_05810 PF00463 Isocitrate lyase family KM417_05820 PF00313 'Cold-shock' DNA-binding domain KM417_05835 PF06338 ComK protein KM417_05840 PF09335 SNARE associated Golgi protein KM417_05845 PF10502 Signal peptidase, peptidase S26 KM417_05850 PF12705 PD-(D/E)XK nuclease superfamily KM417_05850 PF13361 UvrD-like helicase C-terminal domain KM417_05855 PF00580 UvrD/REP helicase N-terminal domain KM417_05855 PF13361 UvrD-like helicase C-terminal domain KM417_05855 PF12705 PD-(D/E)XK nuclease superfamily KM417_05865 PF10676 Spore germination protein gerPA/gerPF KM417_05870 PF10970 Spore germination protein GerPE KM417_05880 PF10737 Spore germination protein GerPC KM417_05885 PF10803 Spore germination GerPB KM417_05890 PF10676 Spore germination protein gerPA/gerPF KM417_05900 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM417_05910 PF00202 Aminotransferase class-III KM417_05915 PF07457 Protein of unknown function (DUF1516) KM417_05925 PF13537 Glutamine amidotransferase domain KM417_05925 PF00733 Asparagine synthase KM417_05930 PF00762 Ferrochelatase KM417_05935 PF06628 Catalase-related immune-responsive KM417_05935 PF00199 Catalase KM417_05940 PF00909 Ammonium Transporter Family KM417_05945 PF00128 Alpha amylase, catalytic domain KM417_05955 PF04461 Protein of unknown function (DUF520) KM417_05960 PF17783 CvfB-like winged helix domain KM417_05960 PF13509 S1 domain KM417_05970 PF00639 PPIC-type PPIASE domain KM417_05980 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM417_05980 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM417_05985 PF12758 Protein of unknown function (DUF3813) KM417_06000 PF14168 YjzC-like protein KM417_06005 PF10431 C-terminal, D2-small domain, of ClpB protein KM417_06005 PF00004 ATPase family associated with various cellular activities (AAA) KM417_06005 PF02861 Clp amino terminal domain, pathogenicity island component KM417_06005 PF17871 AAA lid domain KM417_06005 PF07724 AAA domain (Cdc48 subfamily) KM417_06025 PF10815 ComZ KM417_06030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM417_06030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM417_06035 PF02801 Beta-ketoacyl synthase, C-terminal domain KM417_06035 PF00109 Beta-ketoacyl synthase, N-terminal domain KM417_06040 PF10026 Predicted Zn-dependent protease (DUF2268) KM417_06045 PF12227 Protein of unknown function (DUF3603) KM417_06050 PF00579 tRNA synthetases class I (W and Y) KM417_06060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_06065 PF00528 Binding-protein-dependent transport system inner membrane component KM417_06070 PF00528 Binding-protein-dependent transport system inner membrane component KM417_06070 PF12911 N-terminal TM domain of oligopeptide transport permease C KM417_06075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM417_06075 PF00005 ABC transporter KM417_06080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM417_06080 PF00005 ABC transporter KM417_06085 PF01554 MatE KM417_06090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_06100 PF03960 ArsC family KM417_06105 PF03741 Integral membrane protein TerC family KM417_06110 PF05389 Negative regulator of genetic competence (MecA) KM417_06115 PF13396 Phospholipase_D-nuclease N-terminal KM417_06115 PF13091 PLD-like domain KM417_06125 PF01432 Peptidase family M3 KM417_06125 PF08439 Oligopeptidase F KM417_06140 PF01152 Bacterial-like globin KM417_06145 PF01928 CYTH domain KM417_06155 PF04607 Region found in RelA / SpoT proteins KM417_06160 PF01513 ATP-NAD kinase KM417_06165 PF00849 RNA pseudouridylate synthase KM417_06175 PF00149 Calcineurin-like phosphoesterase KM417_06185 PF00535 Glycosyl transferase family 2 KM417_06190 PF08241 Methyltransferase domain KM417_06195 PF05711 Macrocin-O-methyltransferase (TylF) KM417_06205 PF00535 Glycosyl transferase family 2 KM417_06205 PF13181 Tetratricopeptide repeat KM417_06225 PF00483 Nucleotidyl transferase KM417_06230 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KM417_06235 PF16363 GDP-mannose 4,6 dehydratase KM417_06240 PF04321 RmlD substrate binding domain KM417_06260 PF07098 Protein of unknown function (DUF1360) KM417_06280 PF13361 UvrD-like helicase C-terminal domain KM417_06280 PF00580 UvrD/REP helicase N-terminal domain KM417_06285 PF13673 Acetyltransferase (GNAT) domain KM417_06295 PF00756 Putative esterase KM417_06310 PF02368 Bacterial Ig-like domain (group 2) KM417_06315 PF00474 Sodium:solute symporter family KM417_06320 PF04715 Anthranilate synthase component I, N terminal region KM417_06320 PF00425 chorismate binding enzyme KM417_06325 PF00591 Glycosyl transferase family, a/b domain KM417_06325 PF00117 Glutamine amidotransferase class-I KM417_06325 PF02885 Glycosyl transferase family, helical bundle domain KM417_06330 PF00591 Glycosyl transferase family, a/b domain KM417_06330 PF02885 Glycosyl transferase family, helical bundle domain KM417_06335 PF00218 Indole-3-glycerol phosphate synthase KM417_06340 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KM417_06345 PF00291 Pyridoxal-phosphate dependent enzyme KM417_06350 PF00290 Tryptophan synthase alpha chain KM417_06360 PF02652 L-lactate permease KM417_06365 PF10042 Uncharacterized conserved protein (DUF2278) KM417_06390 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_06390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM417_06420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM417_06420 PF00364 Biotin-requiring enzyme KM417_06420 PF02817 e3 binding domain KM417_06425 PF00676 Dehydrogenase E1 component KM417_06425 PF16870 2-oxoglutarate dehydrogenase C-terminal KM417_06425 PF02779 Transketolase, pyrimidine binding domain KM417_06430 PF01381 Helix-turn-helix KM417_06490 PF13649 Methyltransferase domain KM417_06500 PF07943 Penicillin-binding protein 5, C-terminal domain KM417_06500 PF00768 D-alanyl-D-alanine carboxypeptidase KM417_06510 PF12389 Camelysin metallo-endopeptidase KM417_06520 PF12389 Camelysin metallo-endopeptidase KM417_06525 PF01381 Helix-turn-helix KM417_06525 PF08671 Anti-repressor SinI KM417_06535 PF05547 Immune inhibitor A peptidase M6 KM417_06540 PF00171 Aldehyde dehydrogenase family KM417_06545 PF08402 TOBE domain KM417_06545 PF00005 ABC transporter KM417_06550 PF00528 Binding-protein-dependent transport system inner membrane component KM417_06555 PF00528 Binding-protein-dependent transport system inner membrane component KM417_06560 PF13416 Bacterial extracellular solute-binding protein KM417_06570 PF03176 MMPL family KM417_06580 PF00849 RNA pseudouridylate synthase KM417_06580 PF01479 S4 domain KM417_06590 PF00188 Cysteine-rich secretory protein family KM417_06595 PF13183 4Fe-4S dicluster domain KM417_06595 PF02754 Cysteine-rich domain KM417_06600 PF01565 FAD binding domain KM417_06600 PF02913 FAD linked oxidases, C-terminal domain KM417_06605 PF13556 PucR C-terminal helix-turn-helix domain KM417_06605 PF17853 GGDEF-like domain KM417_06605 PF05651 Putative sugar diacid recognition KM417_06615 PF00486 Transcriptional regulatory protein, C terminal KM417_06615 PF00072 Response regulator receiver domain KM417_06620 PF00672 HAMP domain KM417_06620 PF00512 His Kinase A (phospho-acceptor) domain KM417_06620 PF18698 Histidine kinase sensor domain KM417_06620 PF00989 PAS fold KM417_06620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_06625 PF07729 FCD domain KM417_06625 PF00392 Bacterial regulatory proteins, gntR family KM417_06630 PF02754 Cysteine-rich domain KM417_06635 PF02589 LUD domain KM417_06635 PF13183 4Fe-4S dicluster domain KM417_06635 PF11870 Domain of unknown function (DUF3390) KM417_06640 PF02589 LUD domain KM417_06645 PF01478 Type IV leader peptidase family KM417_06645 PF06750 Bacterial Peptidase A24 N-terminal domain KM417_06660 PF01226 Formate/nitrite transporter KM417_06665 PF03741 Integral membrane protein TerC family KM417_06670 PF02386 Cation transport protein KM417_06675 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM417_06680 PF01575 MaoC like domain KM417_06705 PF00561 alpha/beta hydrolase fold KM417_06710 PF01266 FAD dependent oxidoreductase KM417_06715 PF02386 Cation transport protein KM417_06745 PF13419 Haloacid dehalogenase-like hydrolase KM417_06750 PF00266 Aminotransferase class-V KM417_06760 PF00455 DeoR C terminal sensor domain KM417_06760 PF08220 DeoR-like helix-turn-helix domain KM417_06780 PF04748 Divergent polysaccharide deacetylase KM417_06785 PF09388 Spo0E like sporulation regulatory protein KM417_06790 PF00512 His Kinase A (phospho-acceptor) domain KM417_06790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_06790 PF02743 Cache domain KM417_06795 PF01047 MarR family KM417_06805 PF12867 DinB superfamily KM417_06810 PF13426 PAS domain KM417_06810 PF00989 PAS fold KM417_06810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_06810 PF00512 His Kinase A (phospho-acceptor) domain KM417_06810 PF13188 PAS domain KM417_06815 PF06508 Queuosine biosynthesis protein QueC KM417_06820 PF01242 6-pyruvoyl tetrahydropterin synthase KM417_06825 PF04055 Radical SAM superfamily KM417_06830 PF14489 QueF-like protein KM417_06835 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KM417_06865 PF07972 NrdI Flavodoxin like KM417_06885 PF00268 Ribonucleotide reductase, small chain KM417_06890 PF00392 Bacterial regulatory proteins, gntR family KM417_06895 PF00005 ABC transporter KM417_06905 PF00005 ABC transporter KM417_06925 PF01037 Lrp/AsnC ligand binding domain KM417_06935 PF00857 Isochorismatase family KM417_06945 PF02016 LD-carboxypeptidase N-terminal domain KM417_06945 PF17676 LD-carboxypeptidase C-terminal domain KM417_06950 PF03060 Nitronate monooxygenase KM417_06955 PF04914 DltD protein KM417_06960 PF00550 Phosphopantetheine attachment site KM417_06965 PF03062 MBOAT, membrane-bound O-acyltransferase family KM417_06970 PF00501 AMP-binding enzyme KM417_06970 PF13193 AMP-binding enzyme C-terminal domain KM417_06980 PF01546 Peptidase family M20/M25/M40 KM417_06980 PF07687 Peptidase dimerisation domain KM417_06990 PF00258 Flavodoxin KM417_07005 PF01636 Phosphotransferase enzyme family KM417_07025 PF01554 MatE KM417_07030 PF02673 Bacitracin resistance protein BacA KM417_07045 PF01047 MarR family KM417_07055 PF00375 Sodium:dicarboxylate symporter family KM417_07060 PF02386 Cation transport protein KM417_07070 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM417_07080 PF03698 Uncharacterised protein family (UPF0180) KM417_07095 PF01063 Amino-transferase class IV KM417_07100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM417_07100 PF00205 Thiamine pyrophosphate enzyme, central domain KM417_07100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM417_07105 PF01842 ACT domain KM417_07105 PF10369 Small subunit of acetolactate synthase KM417_07110 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM417_07110 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM417_07115 PF08502 LeuA allosteric (dimerisation) domain KM417_07115 PF00682 HMGL-like KM417_07120 PF00180 Isocitrate/isopropylmalate dehydrogenase KM417_07125 PF00330 Aconitase family (aconitate hydratase) KM417_07130 PF00694 Aconitase C-terminal domain KM417_07135 PF13393 Histidyl-tRNA synthetase KM417_07140 PF01634 ATP phosphoribosyltransferase KM417_07145 PF00815 Histidinol dehydrogenase KM417_07150 PF00475 Imidazoleglycerol-phosphate dehydratase KM417_07155 PF00117 Glutamine amidotransferase class-I KM417_07160 PF00977 Histidine biosynthesis protein KM417_07165 PF00977 Histidine biosynthesis protein KM417_07170 PF01502 Phosphoribosyl-AMP cyclohydrolase KM417_07175 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KM417_07180 PF02811 PHP domain KM417_07190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM417_07190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM417_07195 PF01066 CDP-alcohol phosphatidyltransferase KM417_07200 PF00884 Sulfatase KM417_07210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KM417_07210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KM417_07220 PF01507 Phosphoadenosine phosphosulfate reductase family KM417_07225 PF14306 PUA-like domain KM417_07225 PF01747 ATP-sulfurylase KM417_07235 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM417_07235 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM417_07245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM417_07250 PF01903 CbiX KM417_07260 PF00209 Sodium:neurotransmitter symporter family KM417_07270 PF00375 Sodium:dicarboxylate symporter family KM417_07280 PF03553 Na+/H+ antiporter family KM417_07295 PF09922 Cell wall-active antibiotics response 4TMS YvqF KM417_07300 PF00672 HAMP domain KM417_07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_07300 PF07730 Histidine kinase KM417_07305 PF00072 Response regulator receiver domain KM417_07305 PF00196 Bacterial regulatory proteins, luxR family KM417_07315 PF05525 Branched-chain amino acid transport protein KM417_07325 PF08241 Methyltransferase domain KM417_07350 PF00175 Oxidoreductase NAD-binding domain KM417_07350 PF00970 Oxidoreductase FAD-binding domain KM417_07350 PF00042 Globin KM417_07365 PF01925 Sulfite exporter TauE/SafE KM417_07370 PF01384 Phosphate transporter family KM417_07375 PF01865 Protein of unknown function DUF47 KM417_07380 PF00905 Penicillin binding protein transpeptidase domain KM417_07380 PF00912 Transglycosylase KM417_07395 PF00989 PAS fold KM417_07395 PF00512 His Kinase A (phospho-acceptor) domain KM417_07395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_07400 PF01904 Protein of unknown function DUF72 KM417_07410 PF00589 Phage integrase family KM417_07415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_07415 PF00512 His Kinase A (phospho-acceptor) domain KM417_07415 PF00989 PAS fold KM417_07415 PF16736 Single Cache-like KM417_07420 PF01048 Phosphorylase superfamily KM417_07435 PF09924 Uncharacterised conserved protein (DUF2156) KM417_07435 PF03706 Lysylphosphatidylglycerol synthase TM region KM417_07450 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM417_07450 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM417_07455 PF07943 Penicillin-binding protein 5, C-terminal domain KM417_07455 PF00768 D-alanyl-D-alanine carboxypeptidase KM417_07460 PF07670 Nucleoside recognition KM417_07465 PF07670 Nucleoside recognition KM417_07470 PF00849 RNA pseudouridylate synthase KM417_07470 PF01479 S4 domain KM417_07475 PF00578 AhpC/TSA family KM417_07480 PF05140 ResB-like family KM417_07485 PF01578 Cytochrome C assembly protein KM417_07490 PF00486 Transcriptional regulatory protein, C terminal KM417_07490 PF00072 Response regulator receiver domain KM417_07495 PF00989 PAS fold KM417_07495 PF00672 HAMP domain KM417_07495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_07495 PF18698 Histidine kinase sensor domain KM417_07495 PF00512 His Kinase A (phospho-acceptor) domain KM417_07500 PF01923 Cobalamin adenosyltransferase KM417_07515 PF12822 ECF transporter, substrate-specific component KM417_07525 PF14493 Helix-turn-helix domain KM417_07530 PF00270 DEAD/DEAH box helicase KM417_07530 PF00271 Helicase conserved C-terminal domain KM417_07535 PF02517 CPBP intramembrane metalloprotease KM417_07550 PF02310 B12 binding domain KM417_07550 PF02607 B12 binding domain KM417_07550 PF13411 MerR HTH family regulatory protein KM417_07555 PF05389 Negative regulator of genetic competence (MecA) KM417_07560 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM417_07560 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM417_07585 PF17763 Glutaminase/Asparaginase C-terminal domain KM417_07585 PF00710 Asparaginase, N-terminal KM417_07595 PF02224 Cytidylate kinase KM417_07600 PF00575 S1 RNA binding domain KM417_07605 PF01070 FMN-dependent dehydrogenase KM417_07610 PF14140 YpzI-like protein KM417_07620 PF14045 YIEGIA protein KM417_07630 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KM417_07630 PF01926 50S ribosome-binding GTPase KM417_07635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KM417_07635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KM417_07645 PF10966 Protein of unknown function (DUF2768) KM417_07655 PF09547 Stage IV sporulation protein A (spore_IV_A) KM417_07660 PF00216 Bacterial DNA-binding protein KM417_07665 PF01227 GTP cyclohydrolase I KM417_07670 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KM417_07675 PF01209 ubiE/COQ5 methyltransferase family KM417_07680 PF00348 Polyprenyl synthetase KM417_07685 PF00334 Nucleoside diphosphate kinase KM417_07690 PF01264 Chorismate synthase KM417_07695 PF01761 3-dehydroquinate synthase KM417_07700 PF00155 Aminotransferase class I and II KM417_07710 PF08864 UPF0302 domain KM417_07710 PF08858 IDEAL domain KM417_07715 PF10673 Protein of unknown function (DUF2487) KM417_07720 PF00355 Rieske [2Fe-2S] domain KM417_07725 PF00033 Cytochrome b/b6/petB KM417_07730 PF00032 Cytochrome b(C-terminal)/b6/petD KM417_07730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM417_07735 PF07187 Protein of unknown function (DUF1405) KM417_07745 PF09577 Sporulation protein YpjB (SpoYpjB) KM417_07750 PF04298 Putative neutral zinc metallopeptidase KM417_07760 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM417_07760 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM417_07765 PF03819 MazG nucleotide pyrophosphohydrolase domain KM417_07770 PF01113 Dihydrodipicolinate reductase, N-terminus KM417_07770 PF05173 Dihydrodipicolinate reductase, C-terminus KM417_07775 PF02142 MGS-like domain KM417_07780 PF02585 GlcNAc-PI de-N-acetylase KM417_07785 PF13439 Glycosyltransferase Family 4 KM417_07785 PF00534 Glycosyl transferases group 1 KM417_07790 PF01743 Poly A polymerase head domain KM417_07790 PF12627 Probable RNA and SrmB- binding site of polymerase A KM417_07790 PF13735 tRNA nucleotidyltransferase domain 2 putative KM417_07795 PF02237 Biotin protein ligase C terminal domain KM417_07795 PF03099 Biotin/lipoate A/B protein ligase family KM417_07795 PF08279 HTH domain KM417_07805 PF02548 Ketopantoate hydroxymethyltransferase KM417_07810 PF02569 Pantoate-beta-alanine ligase KM417_07815 PF02261 Aspartate decarboxylase KM417_07820 PF04851 Type III restriction enzyme, res subunit KM417_07820 PF00929 Exonuclease KM417_07820 PF13307 Helicase C-terminal domain KM417_07825 PF14084 Protein of unknown function (DUF4264) KM417_07835 PF00155 Aminotransferase class I and II KM417_07840 PF07261 Replication initiation and membrane attachment KM417_07845 PF00633 Helix-hairpin-helix motif KM417_07845 PF10576 Iron-sulfur binding domain of endonuclease III KM417_07845 PF00730 HhH-GPD superfamily base excision DNA repair protein KM417_07855 PF00905 Penicillin binding protein transpeptidase domain KM417_07855 PF00912 Transglycosylase KM417_07860 PF03838 Recombination protein U KM417_07865 PF10720 Protein of unknown function (DUF2515) KM417_07900 PF06908 YspA SLOG family KM417_07905 PF05103 DivIVA protein KM417_07915 PF01170 Putative RNA methylase family UPF0020 KM417_07915 PF02926 THUMP domain KM417_07925 PF13307 Helicase C-terminal domain KM417_07930 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KM417_07940 PF01636 Phosphotransferase enzyme family KM417_07945 PF00557 Metallopeptidase family M24 KM417_07950 PF00156 Phosphoribosyl transferase domain KM417_07955 PF00860 Permease family KM417_07960 PF04235 Protein of unknown function (DUF418) KM417_07965 PF00350 Dynamin family KM417_07975 PF00583 Acetyltransferase (GNAT) family KM417_07980 PF10752 Protein of unknown function (DUF2533) KM417_07985 PF00581 Rhodanese-like domain KM417_08020 PF00689 Cation transporting ATPase, C-terminus KM417_08020 PF00690 Cation transporter/ATPase, N-terminus KM417_08025 PF01367 5'-3' exonuclease, C-terminal SAM fold KM417_08025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM417_08050 PF02397 Bacterial sugar transferase KM417_08065 PF00535 Glycosyl transferase family 2 KM417_08070 PF13439 Glycosyltransferase Family 4 KM417_08070 PF00534 Glycosyl transferases group 1 KM417_08085 PF18014 Acetyltransferase (GNAT) domain KM417_08085 PF13673 Acetyltransferase (GNAT) domain KM417_08105 PF13456 Reverse transcriptase-like KM417_08110 PF01263 Aldose 1-epimerase KM417_08135 PF00313 'Cold-shock' DNA-binding domain KM417_08145 PF01810 LysE type translocator KM417_08160 PF04341 Protein of unknown function, DUF485 KM417_08165 PF00474 Sodium:solute symporter family KM417_08170 PF00202 Aminotransferase class-III KM417_08180 PF00999 Sodium/hydrogen exchanger family KM417_08185 PF00753 Metallo-beta-lactamase superfamily KM417_08185 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM417_08185 PF17770 Ribonuclease J C-terminal domain KM417_08190 PF06445 GyrI-like small molecule binding domain KM417_08190 PF13411 MerR HTH family regulatory protein KM417_08200 PF04239 Protein of unknown function (DUF421) KM417_08205 PF02698 DUF218 domain KM417_08215 PF00881 Nitroreductase family KM417_08260 PF17209 Hfq protein KM417_08270 PF01618 MotA/TolQ/ExbB proton channel family KM417_08275 PF13677 Membrane MotB of proton-channel complex MotA/MotB KM417_08275 PF00691 OmpA family KM417_08280 PF00072 Response regulator receiver domain KM417_08285 PF07194 P2 response regulator binding domain KM417_08285 PF01627 Hpt domain KM417_08285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_08285 PF02895 Signal transducing histidine kinase, homodimeric domain KM417_08285 PF01584 CheW-like domain KM417_08290 PF01584 CheW-like domain KM417_08290 PF02895 Signal transducing histidine kinase, homodimeric domain KM417_08290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_08290 PF01627 Hpt domain KM417_08290 PF07194 P2 response regulator binding domain KM417_08295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM417_08295 PF04509 CheC-like family KM417_08310 PF01739 CheR methyltransferase, SAM binding domain KM417_08310 PF03705 CheR methyltransferase, all-alpha domain KM417_08330 PF00460 Flagella basal body rod protein KM417_08330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM417_08355 PF00460 Flagella basal body rod protein KM417_08360 PF00460 Flagella basal body rod protein KM417_08360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM417_08365 PF02049 Flagellar hook-basal body complex protein FliE KM417_08375 PF01706 FliG C-terminal domain KM417_08375 PF14841 FliG middle domain KM417_08375 PF14842 FliG N-terminal domain KM417_08385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM417_08385 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM417_08385 PF18269 T3SS EscN ATPase C-terminal domain KM417_08410 PF07559 Flagellar basal body protein FlaE KM417_08410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM417_08410 PF00460 Flagella basal body rod protein KM417_08425 PF01584 CheW-like domain KM417_08425 PF00072 Response regulator receiver domain KM417_08430 PF12181 DNA binding domain of the motility gene repressor (MogR) KM417_08435 PF00535 Glycosyl transferase family 2 KM417_08470 PF00700 Bacterial flagellin C-terminal helical region KM417_08470 PF00669 Bacterial flagellin N-terminal helical region KM417_08475 PF01464 Transglycosylase SLT domain KM417_08490 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM417_08490 PF04509 CheC-like family KM417_08500 PF00813 FliP family KM417_08505 PF01313 Bacterial export proteins, family 3 KM417_08515 PF01312 FlhB HrpN YscU SpaS Family KM417_08520 PF00771 FHIPEP family KM417_08525 PF00448 SRP54-type protein, GTPase domain KM417_08530 PF00460 Flagella basal body rod protein KM417_08530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM417_08535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM417_08535 PF02272 DHHA1 domain KM417_08535 PF01411 tRNA synthetases class II (A) KM417_08560 PF00440 Bacterial regulatory proteins, tetR family KM417_08560 PF17932 Tetracyclin repressor-like, C-terminal domain KM417_08565 PF17329 Family of unknown function (DUF5367) KM417_08580 PF03992 Antibiotic biosynthesis monooxygenase KM417_08585 PF08141 Small acid-soluble spore protein H family KM417_08605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM417_08605 PF03466 LysR substrate binding domain KM417_08610 PF00005 ABC transporter KM417_08610 PF08402 TOBE domain KM417_08620 PF00528 Binding-protein-dependent transport system inner membrane component KM417_08625 PF00753 Metallo-beta-lactamase superfamily KM417_08625 PF12706 Beta-lactamase superfamily domain KM417_08635 PF10787 Uncharacterised protein from bacillus cereus group KM417_08650 PF00768 D-alanyl-D-alanine carboxypeptidase KM417_08650 PF07943 Penicillin-binding protein 5, C-terminal domain KM417_08660 PF00300 Histidine phosphatase superfamily (branch 1) KM417_08690 PF13537 Glutamine amidotransferase domain KM417_08690 PF00733 Asparagine synthase KM417_08710 PF16916 Dimerisation domain of Zinc Transporter KM417_08710 PF01545 Cation efflux family KM417_08720 PF07729 FCD domain KM417_08720 PF00392 Bacterial regulatory proteins, gntR family KM417_08725 PF00892 EamA-like transporter family KM417_08730 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM417_08730 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM417_08735 PF03773 Predicted permease KM417_08745 PF00535 Glycosyl transferase family 2 KM417_08750 PF03553 Na+/H+ antiporter family KM417_08755 PF10415 Fumarase C C-terminus KM417_08755 PF00206 Lyase KM417_08780 PF03575 Peptidase family S51 KM417_08800 PF02683 Cytochrome C biogenesis protein transmembrane region KM417_08805 PF00578 AhpC/TSA family KM417_08825 PF00291 Pyridoxal-phosphate dependent enzyme KM417_08830 PF04286 Protein of unknown function (DUF445) KM417_08855 PF00196 Bacterial regulatory proteins, luxR family KM417_08855 PF00072 Response regulator receiver domain KM417_08860 PF13185 GAF domain KM417_08860 PF13492 GAF domain KM417_08860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_08860 PF07730 Histidine kinase KM417_08865 PF00005 ABC transporter KM417_08880 PF13091 PLD-like domain KM417_08885 PF00696 Amino acid kinase family KM417_08890 PF00375 Sodium:dicarboxylate symporter family KM417_08895 PF10415 Fumarase C C-terminus KM417_08895 PF00206 Lyase KM417_08900 PF00390 Malic enzyme, N-terminal domain KM417_08900 PF03949 Malic enzyme, NAD binding domain KM417_08905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_08910 PF00072 Response regulator receiver domain KM417_08910 PF08664 YcbB domain KM417_08915 PF00271 Helicase conserved C-terminal domain KM417_08915 PF00176 SNF2 family N-terminal domain KM417_08915 PF04434 SWIM zinc finger KM417_08930 PF03590 Aspartate-ammonia ligase KM417_08950 PF13840 ACT domain KM417_08950 PF00696 Amino acid kinase family KM417_08960 PF13761 Domain of unknown function (DUF4166) KM417_08965 PF14158 YndJ-like protein KM417_08970 PF00293 NUDIX domain KM417_08975 PF13205 Bacterial Ig-like domain KM417_08975 PF02368 Bacterial Ig-like domain (group 2) KM417_08975 PF00395 S-layer homology domain KM417_08985 PF07690 Major Facilitator Superfamily KM417_09000 PF02554 Carbon starvation protein CstA KM417_09005 PF03976 Polyphosphate kinase 2 (PPK2) KM417_09015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM417_09015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM417_09025 PF01926 50S ribosome-binding GTPase KM417_09025 PF16360 GTP-binding GTPase Middle Region KM417_09025 PF13167 GTP-binding GTPase N-terminal KM417_09035 PF07690 Major Facilitator Superfamily KM417_09040 PF00291 Pyridoxal-phosphate dependent enzyme KM417_09055 PF14667 Polysaccharide biosynthesis C-terminal domain KM417_09055 PF01943 Polysaccharide biosynthesis protein KM417_09060 PF00209 Sodium:neurotransmitter symporter family KM417_09065 PF03422 Carbohydrate binding module (family 6) KM417_09065 PF00457 Glycosyl hydrolases family 11 KM417_09065 PF01522 Polysaccharide deacetylase KM417_09075 PF04239 Protein of unknown function (DUF421) KM417_09090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM417_09090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM417_09105 PF01625 Peptide methionine sulfoxide reductase KM417_09115 PF01063 Amino-transferase class IV KM417_09120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM417_09120 PF00205 Thiamine pyrophosphate enzyme, central domain KM417_09120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM417_09125 PF10369 Small subunit of acetolactate synthase KM417_09130 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM417_09130 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM417_09135 PF00920 Dehydratase family KM417_09140 PF00291 Pyridoxal-phosphate dependent enzyme KM417_09140 PF00585 C-terminal regulatory domain of Threonine dehydratase KM417_09150 PF09587 Bacterial capsule synthesis protein PGA_cap KM417_09165 PF07690 Major Facilitator Superfamily KM417_09170 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KM417_09180 PF04397 LytTr DNA-binding domain KM417_09180 PF00072 Response regulator receiver domain KM417_09185 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KM417_09185 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KM417_09200 PF01979 Amidohydrolase family KM417_09205 PF13026 Protein of unknown function (DUF3887) KM417_09205 PF12146 Serine aminopeptidase, S33 KM417_09235 PF04055 Radical SAM superfamily KM417_09235 PF13186 Iron-sulfur cluster-binding domain KM417_09240 PF13302 Acetyltransferase (GNAT) domain KM417_09245 PF00072 Response regulator receiver domain KM417_09245 PF00486 Transcriptional regulatory protein, C terminal KM417_09260 PF01566 Natural resistance-associated macrophage protein KM417_09265 PF00581 Rhodanese-like domain KM417_09265 PF12368 Rhodanase C-terminal KM417_09265 PF17773 UPF0176 acylphosphatase like domain KM417_09275 PF02558 Ketopantoate reductase PanE/ApbA KM417_09275 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM417_09290 PF05791 Bacillus haemolytic enterotoxin (HBL) KM417_09305 PF04198 Putative sugar-binding domain KM417_09310 PF01791 DeoC/LacD family aldolase KM417_09315 PF01773 Na+ dependent nucleoside transporter N-terminus KM417_09315 PF07662 Na+ dependent nucleoside transporter C-terminus KM417_09320 PF00591 Glycosyl transferase family, a/b domain KM417_09320 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM417_09320 PF02885 Glycosyl transferase family, helical bundle domain KM417_09325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM417_09335 PF05979 Bacterial protein of unknown function (DUF896) KM417_09355 PF05195 Aminopeptidase P, N-terminal domain KM417_09355 PF00557 Metallopeptidase family M24 KM417_09360 PF07731 Multicopper oxidase KM417_09360 PF07732 Multicopper oxidase KM417_09365 PF01551 Peptidase family M23 KM417_09375 PF01396 Topoisomerase DNA binding C4 zinc finger KM417_09375 PF13342 C-terminal repeat of topoisomerase KM417_09375 PF01751 Toprim domain KM417_09375 PF01131 DNA topoisomerase KM417_09390 PF02525 Flavodoxin-like fold KM417_09405 PF13115 YtkA-like KM417_09405 PF04234 CopC domain KM417_09405 PF05425 Copper resistance protein D KM417_09410 PF07987 Domain of unkown function (DUF1775) KM417_09420 PF00892 EamA-like transporter family KM417_09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM417_09425 PF03466 LysR substrate binding domain KM417_09430 PF02082 Transcriptional regulator KM417_09435 PF01323 DSBA-like thioredoxin domain KM417_09440 PF00881 Nitroreductase family KM417_09445 PF01425 Amidase KM417_09450 PF01594 AI-2E family transporter KM417_09455 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM417_09455 PF00056 lactate/malate dehydrogenase, NAD binding domain KM417_09460 PF01593 Flavin containing amine oxidoreductase KM417_09465 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM417_09465 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM417_09480 PF00501 AMP-binding enzyme KM417_09480 PF13193 AMP-binding enzyme C-terminal domain KM417_09485 PF01575 MaoC like domain KM417_09490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM417_09490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM417_09500 PF12399 Branched-chain amino acid ATP-binding cassette transporter KM417_09500 PF00005 ABC transporter KM417_09505 PF00005 ABC transporter KM417_09510 PF02653 Branched-chain amino acid transport system / permease component KM417_09520 PF03466 LysR substrate binding domain KM417_09520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM417_09540 PF01047 MarR family KM417_09550 PF01654 Cytochrome bd terminal oxidase subunit I KM417_09555 PF02322 Cytochrome bd terminal oxidase subunit II KM417_09560 PF00005 ABC transporter KM417_09560 PF00664 ABC transporter transmembrane region KM417_09565 PF00664 ABC transporter transmembrane region KM417_09565 PF00005 ABC transporter KM417_09580 PF17676 LD-carboxypeptidase C-terminal domain KM417_09580 PF02016 LD-carboxypeptidase N-terminal domain KM417_09585 PF00768 D-alanyl-D-alanine carboxypeptidase KM417_09585 PF07943 Penicillin-binding protein 5, C-terminal domain KM417_09600 PF01476 LysM domain KM417_09600 PF00877 NlpC/P60 family KM417_09615 PF00486 Transcriptional regulatory protein, C terminal KM417_09615 PF00072 Response regulator receiver domain KM417_09620 PF16736 Single Cache-like KM417_09620 PF00989 PAS fold KM417_09620 PF00512 His Kinase A (phospho-acceptor) domain KM417_09620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_09630 PF00106 short chain dehydrogenase KM417_09640 PF04439 Streptomycin adenylyltransferase KM417_09645 PF01522 Polysaccharide deacetylase KM417_09665 PF03447 Homoserine dehydrogenase, NAD binding domain KM417_09665 PF00742 Homoserine dehydrogenase KM417_09665 PF01842 ACT domain KM417_09670 PF00291 Pyridoxal-phosphate dependent enzyme KM417_09675 PF00288 GHMP kinases N terminal domain KM417_09675 PF08544 GHMP kinases C terminal KM417_09690 PF03816 Cell envelope-related transcriptional attenuator domain KM417_09700 PF00072 Response regulator receiver domain KM417_09700 PF00486 Transcriptional regulatory protein, C terminal KM417_09705 PF16736 Single Cache-like KM417_09705 PF00989 PAS fold KM417_09705 PF00512 His Kinase A (phospho-acceptor) domain KM417_09705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_09710 PF01522 Polysaccharide deacetylase KM417_09720 PF02308 MgtC family KM417_09725 PF00583 Acetyltransferase (GNAT) family KM417_09730 PF04183 IucA / IucC family KM417_09730 PF06276 Ferric iron reductase FhuF-like transporter KM417_09735 PF06276 Ferric iron reductase FhuF-like transporter KM417_09735 PF04183 IucA / IucC family KM417_09740 PF13193 AMP-binding enzyme C-terminal domain KM417_09740 PF00501 AMP-binding enzyme KM417_09755 PF01261 Xylose isomerase-like TIM barrel KM417_09760 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM417_09770 PF01810 LysE type translocator KM417_09780 PF01734 Patatin-like phospholipase KM417_09805 PF00293 NUDIX domain KM417_09805 PF13344 Haloacid dehalogenase-like hydrolase KM417_09810 PF02540 NAD synthase KM417_09820 PF18277 AbrB C-terminal domain KM417_09820 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM417_09825 PF00082 Subtilase family KM417_09830 PF01022 Bacterial regulatory protein, arsR family KM417_09835 PF00248 Aldo/keto reductase family KM417_09840 PF07690 Major Facilitator Superfamily KM417_09860 PF03193 RsgA GTPase KM417_09865 PF00672 HAMP domain KM417_09865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM417_09865 PF02743 Cache domain KM417_09885 PF00210 Ferritin-like domain KM417_09900 PF00296 Luciferase-like monooxygenase KM417_09910 PF01593 Flavin containing amine oxidoreductase KM417_09920 PF00248 Aldo/keto reductase family KM417_09925 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM417_09925 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM417_09930 PF00583 Acetyltransferase (GNAT) family KM417_09985 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM417_09985 PF01297 Zinc-uptake complex component A periplasmic KM417_09995 PF13460 NAD(P)H-binding KM417_10000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM417_10005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM417_10005 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM417_10015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_10020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM417_10030 PF00300 Histidine phosphatase superfamily (branch 1) KM417_10040 PF08757 CotH kinase protein KM417_10045 PF00293 NUDIX domain KM417_10050 PF09335 SNARE associated Golgi protein KM417_10055 PF01943 Polysaccharide biosynthesis protein KM417_10055 PF14667 Polysaccharide biosynthesis C-terminal domain KM417_10065 PF03773 Predicted permease KM417_10070 PF09323 Domain of unknown function (DUF1980) KM417_10075 PF03061 Thioesterase superfamily KM417_10085 PF13396 Phospholipase_D-nuclease N-terminal KM417_10085 PF13091 PLD-like domain KM417_10100 PF13460 NAD(P)H-binding KM417_10105 PF04306 Protein of unknown function (DUF456) KM417_10110 PF01595 Cyclin M transmembrane N-terminal domain KM417_10110 PF00571 CBS domain KM417_10110 PF03471 Transporter associated domain KM417_10125 PF05525 Branched-chain amino acid transport protein KM417_10130 PF01588 Putative tRNA binding domain KM417_10150 PF07454 Stage II sporulation protein P (SpoIIP) KM417_10160 PF02557 D-alanyl-D-alanine carboxypeptidase KM417_10170 PF01425 Amidase KM417_10175 PF07690 Major Facilitator Superfamily KM417_10185 PF01145 SPFH domain / Band 7 family KM417_10190 PF00300 Histidine phosphatase superfamily (branch 1) KM417_10205 PF01168 Alanine racemase, N-terminal domain KM417_10205 PF00842 Alanine racemase, C-terminal domain KM417_10210 PF13847 Methyltransferase domain KM417_10225 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM417_10230 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM417_10230 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM417_10235 PF00155 Aminotransferase class I and II KM417_10235 PF00392 Bacterial regulatory proteins, gntR family KM417_10260 PF00583 Acetyltransferase (GNAT) family KM417_10310 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM417_10335 PF01209 ubiE/COQ5 methyltransferase family KM417_10340 PF01268 Formate--tetrahydrofolate ligase KM417_10350 PF00270 DEAD/DEAH box helicase KM417_10350 PF00271 Helicase conserved C-terminal domain KM417_10360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM417_10370 PF08240 Alcohol dehydrogenase GroES-like domain KM417_10370 PF00107 Zinc-binding dehydrogenase KM417_10375 PF04542 Sigma-70 region 2 KM417_10375 PF08281 Sigma-70, region 4 KM417_10400 PF00255 Glutathione peroxidase KM417_10405 PF11992 Domain of unknown function (DUF3488) KM417_10405 PF01841 Transglutaminase-like superfamily KM417_10405 PF13559 Domain of unknown function (DUF4129) KM417_10410 PF01882 Protein of unknown function DUF58 KM417_10415 PF17863 AAA lid domain KM417_10415 PF07726 ATPase family associated with various cellular activities (AAA) KM417_10430 PF14710 Respiratory nitrate reductase alpha N-terminal KM417_10430 PF01568 Molydopterin dinucleotide binding domain KM417_10430 PF00384 Molybdopterin oxidoreductase KM417_10435 PF14711 Respiratory nitrate reductase beta C-terminal KM417_10435 PF13247 4Fe-4S dicluster domain KM417_10440 PF02613 Nitrate reductase delta subunit KM417_10445 PF02665 Nitrate reductase gamma subunit KM417_10450 PF00392 Bacterial regulatory proteins, gntR family KM417_10450 PF00155 Aminotransferase class I and II KM417_10455 PF00005 ABC transporter KM417_10465 PF00325 Bacterial regulatory proteins, crp family KM417_10465 PF00027 Cyclic nucleotide-binding domain KM417_10470 PF04055 Radical SAM superfamily KM417_10470 PF06463 Molybdenum Cofactor Synthesis C KM417_10475 PF00899 ThiF family KM417_10480 PF03454 MoeA C-terminal region (domain IV) KM417_10480 PF03453 MoeA N-terminal region (domain I and II) KM417_10480 PF00994 Probable molybdopterin binding domain KM417_10485 PF02391 MoaE protein KM417_10495 PF07690 Major Facilitator Superfamily KM417_10515 PF01903 CbiX KM417_10520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM417_10525 PF00355 Rieske [2Fe-2S] domain KM417_10530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM417_10530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM417_10530 PF18267 Rubredoxin NAD+ reductase C-terminal domain KM417_10530 PF04324 BFD-like [2Fe-2S] binding domain KM417_10530 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_10535 PF04405 Domain of Unknown function (DUF542) KM417_10535 PF01814 Hemerythrin HHE cation binding domain KM417_10570 PF04232 Stage V sporulation protein S (SpoVS) KM417_10585 PF01510 N-acetylmuramoyl-L-alanine amidase KM417_10600 PF01966 HD domain KM417_10605 PF12848 ABC transporter KM417_10605 PF16326 ABC transporter C-terminal domain KM417_10605 PF00005 ABC transporter KM417_10620 PF00436 Single-strand binding protein family KM417_10625 PF00440 Bacterial regulatory proteins, tetR family KM417_10635 PF13769 Virulence factor KM417_10635 PF08712 Scaffold protein Nfu/NifU N terminal KM417_10645 PF06491 Disulphide isomerase KM417_10650 PF04445 Putative SAM-dependent methyltransferase KM417_10655 PF03485 Arginyl tRNA synthetase N terminal domain KM417_10655 PF05746 DALR anticodon binding domain KM417_10655 PF00750 tRNA synthetases class I (R) KM417_10680 PF08264 Anticodon-binding domain of tRNA KM417_10680 PF00133 tRNA synthetases class I (I, L, M and V) KM417_10700 PF00152 tRNA synthetases class II (D, K and N) KM417_10700 PF01336 OB-fold nucleic acid binding domain KM417_10720 PF01580 FtsK/SpoIIIE family KM417_10720 PF12538 DNA transporter KM417_10790 PF02595 Glycerate kinase family KM417_10795 PF00939 Sodium:sulfate symporter transmembrane region KM417_10800 PF00486 Transcriptional regulatory protein, C terminal KM417_10800 PF00072 Response regulator receiver domain KM417_10805 PF00672 HAMP domain KM417_10805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_10805 PF00512 His Kinase A (phospho-acceptor) domain KM417_10820 PF00209 Sodium:neurotransmitter symporter family KM417_10835 PF10997 Alternate to MurJ KM417_10840 PF13419 Haloacid dehalogenase-like hydrolase KM417_10850 PF00465 Iron-containing alcohol dehydrogenase KM417_10855 PF01177 Asp/Glu/Hydantoin racemase KM417_10860 PF01980 tRNA-methyltransferase O KM417_10865 PF00583 Acetyltransferase (GNAT) family KM417_10880 PF00005 ABC transporter KM417_10890 PF14005 YpjP-like protein KM417_10895 PF13419 Haloacid dehalogenase-like hydrolase KM417_10915 PF07930 D-aminopeptidase, domain B KM417_10915 PF00144 Beta-lactamase KM417_10920 PF00303 Thymidylate synthase KM417_10925 PF00186 Dihydrofolate reductase KM417_10930 PF05223 NTF2-like N-terminal transpeptidase domain KM417_10930 PF03717 Penicillin-binding Protein dimerisation domain KM417_10930 PF00905 Penicillin binding protein transpeptidase domain KM417_10935 PF02525 Flavodoxin-like fold KM417_10940 PF01553 Acyltransferase KM417_10945 PF03006 Haemolysin-III related KM417_10950 PF02416 mttA/Hcf106 family KM417_10955 PF00902 Sec-independent protein translocase protein (TatC) KM417_10965 PF02645 Uncharacterised protein, DegV family COG1307 KM417_10975 PF02630 SCO1/SenC KM417_10980 PF00011 Hsp20/alpha crystallin family KM417_10985 PF13537 Glutamine amidotransferase domain KM417_10985 PF00733 Asparagine synthase KM417_11000 PF01497 Periplasmic binding protein KM417_11005 PF01063 Amino-transferase class IV KM417_11010 PF00881 Nitroreductase family KM417_11030 PF00293 NUDIX domain KM417_11035 PF00011 Hsp20/alpha crystallin family KM417_11040 PF00924 Mechanosensitive ion channel KM417_11045 PF13185 GAF domain KM417_11045 PF07730 Histidine kinase KM417_11050 PF00072 Response regulator receiver domain KM417_11050 PF00196 Bacterial regulatory proteins, luxR family KM417_11060 PF00107 Zinc-binding dehydrogenase KM417_11060 PF08240 Alcohol dehydrogenase GroES-like domain KM417_11085 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM417_11085 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM417_11090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM417_11090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM417_11105 PF03358 NADPH-dependent FMN reductase KM417_11120 PF00005 ABC transporter KM417_11120 PF00571 CBS domain KM417_11125 PF00528 Binding-protein-dependent transport system inner membrane component KM417_11130 PF13520 Amino acid permease KM417_11160 PF00202 Aminotransferase class-III KM417_11165 PF01144 Coenzyme A transferase KM417_11170 PF01144 Coenzyme A transferase KM417_11175 PF07687 Peptidase dimerisation domain KM417_11175 PF01546 Peptidase family M20/M25/M40 KM417_11180 PF00583 Acetyltransferase (GNAT) family KM417_11185 PF13426 PAS domain KM417_11185 PF02954 Bacterial regulatory protein, Fis family KM417_11185 PF00158 Sigma-54 interaction domain KM417_11190 PF12544 Lysine-2,3-aminomutase KM417_11195 PF14122 YokU-like protein, putative antitoxin KM417_11200 PF06855 YozE SAM-like fold KM417_11215 PF14162 YozD-like protein KM417_11230 PF07070 SpoOM protein KM417_11235 PF01569 PAP2 superfamily KM417_11240 PF16916 Dimerisation domain of Zinc Transporter KM417_11240 PF01545 Cation efflux family KM417_11245 PF00085 Thioredoxin KM417_11260 PF04740 LXG domain of WXG superfamily KM417_11260 PF14436 Bacterial EndoU nuclease KM417_11265 PF00395 S-layer homology domain KM417_11265 PF00150 Cellulase (glycosyl hydrolase family 5) KM417_11265 PF03424 Carbohydrate binding domain (family 17/28) KM417_11275 PF04471 Restriction endonuclease KM417_11385 PF10676 Spore germination protein gerPA/gerPF KM417_11405 PF00912 Transglycosylase KM417_11405 PF00905 Penicillin binding protein transpeptidase domain KM417_11410 PF07690 Major Facilitator Superfamily KM417_11415 PF01521 Iron-sulphur cluster biosynthesis KM417_11420 PF00285 Citrate synthase, C-terminal domain KM417_11425 PF03972 MmgE/PrpD family KM417_11435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM417_11435 PF02770 Acyl-CoA dehydrogenase, middle domain KM417_11435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM417_11440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM417_11440 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM417_11445 PF00171 Aldehyde dehydrogenase family KM417_11450 PF01810 LysE type translocator KM417_11455 PF00378 Enoyl-CoA hydratase/isomerase KM417_11465 PF10763 Protein of unknown function (DUF2584) KM417_11470 PF12320 Type 5 capsule protein repressor C-terminal domain KM417_11470 PF00149 Calcineurin-like phosphoesterase KM417_11475 PF13476 AAA domain KM417_11485 PF01022 Bacterial regulatory protein, arsR family KM417_11495 PF07690 Major Facilitator Superfamily KM417_11500 PF00106 short chain dehydrogenase KM417_11505 PF00425 chorismate binding enzyme KM417_11510 PF00501 AMP-binding enzyme KM417_11510 PF13193 AMP-binding enzyme C-terminal domain KM417_11515 PF00550 Phosphopantetheine attachment site KM417_11515 PF00857 Isochorismatase family KM417_11520 PF00501 AMP-binding enzyme KM417_11520 PF00668 Condensation domain KM417_11520 PF00550 Phosphopantetheine attachment site KM417_11520 PF00975 Thioesterase domain KM417_11520 PF13193 AMP-binding enzyme C-terminal domain KM417_11525 PF03621 MbtH-like protein KM417_11530 PF07690 Major Facilitator Superfamily KM417_11545 PF00216 Bacterial DNA-binding protein KM417_11555 PF05163 DinB family KM417_11560 PF00082 Subtilase family KM417_11565 PF01235 Sodium:alanine symporter family KM417_11580 PF16291 Domain of unknown function (DUF4937 KM417_11585 PF01479 S4 domain KM417_11585 PF00849 RNA pseudouridylate synthase KM417_11590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM417_11590 PF03129 Anticodon binding domain KM417_11590 PF02824 TGS domain KM417_11590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM417_11605 PF12146 Serine aminopeptidase, S33 KM417_11610 PF07690 Major Facilitator Superfamily KM417_11630 PF13649 Methyltransferase domain KM417_11675 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM417_11675 PF00753 Metallo-beta-lactamase superfamily KM417_11685 PF03176 MMPL family KM417_11695 PF00302 Chloramphenicol acetyltransferase KM417_11710 PF00583 Acetyltransferase (GNAT) family KM417_11740 PF01593 Flavin containing amine oxidoreductase KM417_11750 PF13302 Acetyltransferase (GNAT) domain KM417_11760 PF00313 'Cold-shock' DNA-binding domain KM417_11825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM417_11825 PF03466 LysR substrate binding domain KM417_11830 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM417_11830 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM417_11845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM417_11845 PF03466 LysR substrate binding domain KM417_11850 PF03473 MOSC domain KM417_11850 PF03475 3-alpha domain KM417_11865 PF00005 ABC transporter KM417_11865 PF00664 ABC transporter transmembrane region KM417_11870 PF00005 ABC transporter KM417_11870 PF00664 ABC transporter transmembrane region KM417_11885 PF01810 LysE type translocator KM417_11890 PF01381 Helix-turn-helix KM417_11890 PF07883 Cupin domain KM417_11915 PF00890 FAD binding domain KM417_11920 PF08281 Sigma-70, region 4 KM417_11920 PF12680 SnoaL-like domain KM417_11920 PF04542 Sigma-70 region 2 KM417_11945 PF02638 Glycosyl hydrolase-like 10 KM417_11955 PF02378 Phosphotransferase system, EIIC KM417_11965 PF03702 Anhydro-N-acetylmuramic acid kinase KM417_11970 PF01869 BadF/BadG/BcrA/BcrD ATPase family KM417_11975 PF02660 Glycerol-3-phosphate acyltransferase KM417_11980 PF00266 Aminotransferase class-V KM417_11985 PF00291 Pyridoxal-phosphate dependent enzyme KM417_12000 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM417_12000 PF00753 Metallo-beta-lactamase superfamily KM417_12015 PF00270 DEAD/DEAH box helicase KM417_12015 PF00271 Helicase conserved C-terminal domain KM417_12030 PF00440 Bacterial regulatory proteins, tetR family KM417_12030 PF17932 Tetracyclin repressor-like, C-terminal domain KM417_12045 PF00005 ABC transporter KM417_12045 PF12704 MacB-like periplasmic core domain KM417_12045 PF02687 FtsX-like permease family KM417_12050 PF03848 Tellurite resistance protein TehB KM417_12050 PF09313 Domain of unknown function (DUF1971) KM417_12060 PF08241 Methyltransferase domain KM417_12065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM417_12065 PF00205 Thiamine pyrophosphate enzyme, central domain KM417_12065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM417_12070 PF12802 MarR family KM417_12075 PF00300 Histidine phosphatase superfamily (branch 1) KM417_12080 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KM417_12110 PF07687 Peptidase dimerisation domain KM417_12110 PF01546 Peptidase family M20/M25/M40 KM417_12125 PF08281 Sigma-70, region 4 KM417_12125 PF04542 Sigma-70 region 2 KM417_12135 PF00905 Penicillin binding protein transpeptidase domain KM417_12135 PF03717 Penicillin-binding Protein dimerisation domain KM417_12150 PF01569 PAP2 superfamily KM417_12155 PF00356 Bacterial regulatory proteins, lacI family KM417_12160 PF07690 Major Facilitator Superfamily KM417_12165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM417_12165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM417_12170 PF00294 pfkB family carbohydrate kinase KM417_12175 PF00171 Aldehyde dehydrogenase family KM417_12180 PF00205 Thiamine pyrophosphate enzyme, central domain KM417_12180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM417_12180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM417_12185 PF01261 Xylose isomerase-like TIM barrel KM417_12190 PF01116 Fructose-bisphosphate aldolase class-II KM417_12195 PF04962 KduI/IolB family KM417_12220 PF18801 response regulator aspartate phosphatase H, N terminal KM417_12225 PF01381 Helix-turn-helix KM417_12240 PF02557 D-alanyl-D-alanine carboxypeptidase KM417_12250 PF01520 N-acetylmuramoyl-L-alanine amidase KM417_12250 PF00395 S-layer homology domain KM417_12260 PF00440 Bacterial regulatory proteins, tetR family KM417_12265 PF00005 ABC transporter KM417_12265 PF16326 ABC transporter C-terminal domain KM417_12275 PF00563 EAL domain KM417_12275 PF03707 Bacterial signalling protein N terminal repeat KM417_12275 PF00990 Diguanylate cyclase, GGDEF domain KM417_12280 PF13302 Acetyltransferase (GNAT) domain KM417_12295 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_12300 PF00581 Rhodanese-like domain KM417_12315 PF00005 ABC transporter KM417_12325 PF00440 Bacterial regulatory proteins, tetR family KM417_12325 PF08359 YsiA-like protein, C-terminal region KM417_12340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM417_12340 PF02770 Acyl-CoA dehydrogenase, middle domain KM417_12340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM417_12345 PF02785 Biotin carboxylase C-terminal domain KM417_12345 PF00289 Biotin carboxylase, N-terminal domain KM417_12345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM417_12350 PF00364 Biotin-requiring enzyme KM417_12355 PF00682 HMGL-like KM417_12360 PF00378 Enoyl-CoA hydratase/isomerase KM417_12365 PF01039 Carboxyl transferase domain KM417_12370 PF00501 AMP-binding enzyme KM417_12370 PF13193 AMP-binding enzyme C-terminal domain KM417_12370 PF16177 Acetyl-coenzyme A synthetase N-terminus KM417_12380 PF00583 Acetyltransferase (GNAT) family KM417_12385 PF00485 Phosphoribulokinase / Uridine kinase family KM417_12395 PF05163 DinB family KM417_12400 PF07943 Penicillin-binding protein 5, C-terminal domain KM417_12400 PF00768 D-alanyl-D-alanine carboxypeptidase KM417_12405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_12405 PF00512 His Kinase A (phospho-acceptor) domain KM417_12410 PF00072 Response regulator receiver domain KM417_12410 PF00486 Transcriptional regulatory protein, C terminal KM417_12415 PF01966 HD domain KM417_12420 PF13021 Domain of unknown function (DUF3885) KM417_12425 PF01048 Phosphorylase superfamily KM417_12465 PF17755 UvrA DNA-binding domain KM417_12465 PF17760 UvrA interaction domain KM417_12465 PF17755 UvrA DNA-binding domain KM417_12465 PF17760 UvrA interaction domain KM417_12480 PF00144 Beta-lactamase KM417_12485 PF00376 MerR family regulatory protein KM417_12485 PF09278 MerR, DNA binding KM417_12490 PF07690 Major Facilitator Superfamily KM417_12510 PF01636 Phosphotransferase enzyme family KM417_12515 PF12833 Helix-turn-helix domain KM417_12530 PF00392 Bacterial regulatory proteins, gntR family KM417_12530 PF00155 Aminotransferase class I and II KM417_12545 PF08240 Alcohol dehydrogenase GroES-like domain KM417_12545 PF00107 Zinc-binding dehydrogenase KM417_12575 PF07486 Cell Wall Hydrolase KM417_12585 PF00072 Response regulator receiver domain KM417_12585 PF00486 Transcriptional regulatory protein, C terminal KM417_12600 PF00005 ABC transporter KM417_12600 PF12848 ABC transporter KM417_12615 PF00005 ABC transporter KM417_12640 PF00742 Homoserine dehydrogenase KM417_12640 PF03447 Homoserine dehydrogenase, NAD binding domain KM417_12640 PF01842 ACT domain KM417_12645 PF00155 Aminotransferase class I and II KM417_12645 PF00392 Bacterial regulatory proteins, gntR family KM417_12650 PF07478 D-ala D-ala ligase C-terminus KM417_12650 PF01820 D-ala D-ala ligase N-terminus KM417_12655 PF03070 TENA/THI-4/PQQC family KM417_12720 PF00067 Cytochrome P450 KM417_12730 PF00132 Bacterial transferase hexapeptide (six repeats) KM417_12735 PF07561 Domain of Unknown Function (DUF1540) KM417_12745 PF00067 Cytochrome P450 KM417_12765 PF13426 PAS domain KM417_12765 PF13188 PAS domain KM417_12765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_12765 PF00512 His Kinase A (phospho-acceptor) domain KM417_12765 PF00989 PAS fold KM417_12770 PF00905 Penicillin binding protein transpeptidase domain KM417_12770 PF03717 Penicillin-binding Protein dimerisation domain KM417_12775 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM417_12780 PF01177 Asp/Glu/Hydantoin racemase KM417_12785 PF07155 ECF-type riboflavin transporter, S component KM417_12790 PF00005 ABC transporter KM417_12790 PF12558 ATP-binding cassette cobalt transporter KM417_12805 PF00512 His Kinase A (phospho-acceptor) domain KM417_12805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_12815 PF04229 GrpB protein KM417_12820 PF08240 Alcohol dehydrogenase GroES-like domain KM417_12820 PF00107 Zinc-binding dehydrogenase KM417_12825 PF00905 Penicillin binding protein transpeptidase domain KM417_12825 PF03717 Penicillin-binding Protein dimerisation domain KM417_12825 PF03793 PASTA domain KM417_12835 PF11954 Domain of unknown function (DUF3471) KM417_12835 PF00144 Beta-lactamase KM417_12870 PF01965 DJ-1/PfpI family KM417_12885 PF00144 Beta-lactamase KM417_12900 PF07690 Major Facilitator Superfamily KM417_12915 PF03009 Glycerophosphoryl diester phosphodiesterase family KM417_12935 PF00892 EamA-like transporter family KM417_12940 PF01270 Glycosyl hydrolases family 8 KM417_12950 PF00293 NUDIX domain KM417_12960 PF00144 Beta-lactamase KM417_12970 PF07690 Major Facilitator Superfamily KM417_12985 PF09297 NADH pyrophosphatase zinc ribbon domain KM417_12985 PF00293 NUDIX domain KM417_12990 PF02768 DNA polymerase III beta subunit, C-terminal domain KM417_12990 PF02767 DNA polymerase III beta subunit, central domain KM417_12990 PF00712 DNA polymerase III beta subunit, N-terminal domain KM417_12995 PF00293 NUDIX domain KM417_13010 PF12706 Beta-lactamase superfamily domain KM417_13030 PF09234 Domain of unknown function (DUF1963) KM417_13055 PF08000 Bacterial PH domain KM417_13065 PF12867 DinB superfamily KM417_13080 PF02673 Bacitracin resistance protein BacA KM417_13090 PF01541 GIY-YIG catalytic domain KM417_13130 PF01266 FAD dependent oxidoreductase KM417_13155 PF13419 Haloacid dehalogenase-like hydrolase KM417_13175 PF00282 Pyridoxal-dependent decarboxylase conserved domain KM417_13180 PF00668 Condensation domain KM417_13180 PF00550 Phosphopantetheine attachment site KM417_13180 PF13193 AMP-binding enzyme C-terminal domain KM417_13180 PF00501 AMP-binding enzyme KM417_13190 PF00128 Alpha amylase, catalytic domain KM417_13190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM417_13190 PF03714 Bacterial pullanase-associated domain KM417_13195 PF01447 Thermolysin metallopeptidase, catalytic domain KM417_13195 PF03413 Peptidase propeptide and YPEB domain KM417_13195 PF07504 Fungalysin/Thermolysin Propeptide Motif KM417_13195 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM417_13215 PF00344 SecY translocase KM417_13220 PF11638 DnaA N-terminal domain KM417_13220 PF00308 Bacterial dnaA protein KM417_13220 PF08299 Bacterial dnaA protein helix-turn-helix KM417_13225 PF00892 EamA-like transporter family KM417_13230 PF00155 Aminotransferase class I and II KM417_13230 PF00392 Bacterial regulatory proteins, gntR family KM417_13235 PF00561 alpha/beta hydrolase fold KM417_13260 PF06081 Aromatic acid exporter family member 1 KM417_13275 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM417_13280 PF14620 YpeB sporulation KM417_13280 PF03413 Peptidase propeptide and YPEB domain KM417_13285 PF01471 Putative peptidoglycan binding domain KM417_13285 PF07486 Cell Wall Hydrolase KM417_13300 PF03301 Tryptophan 2,3-dioxygenase KM417_13305 PF04199 Putative cyclase KM417_13310 PF00266 Aminotransferase class-V KM417_13315 PF00440 Bacterial regulatory proteins, tetR family KM417_13315 PF08359 YsiA-like protein, C-terminal region KM417_13320 PF13344 Haloacid dehalogenase-like hydrolase KM417_13320 PF00293 NUDIX domain KM417_13345 PF01590 GAF domain KM417_13345 PF00158 Sigma-54 interaction domain KM417_13345 PF02954 Bacterial regulatory protein, Fis family KM417_13360 PF13302 Acetyltransferase (GNAT) domain KM417_13365 PF08220 DeoR-like helix-turn-helix domain KM417_13365 PF00455 DeoR C terminal sensor domain KM417_13380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM417_13380 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_13380 PF00403 Heavy-metal-associated domain KM417_13385 PF02082 Transcriptional regulator KM417_13400 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_13400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM417_13405 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM417_13405 PF00364 Biotin-requiring enzyme KM417_13405 PF02817 e3 binding domain KM417_13410 PF02779 Transketolase, pyrimidine binding domain KM417_13410 PF02780 Transketolase, C-terminal domain KM417_13415 PF00676 Dehydrogenase E1 component KM417_13425 PF00106 short chain dehydrogenase KM417_13430 PF04229 GrpB protein KM417_13430 PF13673 Acetyltransferase (GNAT) domain KM417_13460 PF00528 Binding-protein-dependent transport system inner membrane component KM417_13465 PF00571 CBS domain KM417_13465 PF00005 ABC transporter KM417_13470 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KM417_13475 PF00574 Clp protease KM417_13490 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KM417_13495 PF13673 Acetyltransferase (GNAT) domain KM417_13500 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM417_13500 PF18416 N-acetylglucosamine binding protein domain 2 KM417_13515 PF10990 Protein of unknown function (DUF2809) KM417_13540 PF03772 Competence protein KM417_13540 PF00753 Metallo-beta-lactamase superfamily KM417_13540 PF13567 Domain of unknown function (DUF4131) KM417_13590 PF13538 UvrD-like helicase C-terminal domain KM417_13605 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KM417_13610 PF00270 DEAD/DEAH box helicase KM417_13610 PF00271 Helicase conserved C-terminal domain KM417_13610 PF00570 HRDC domain KM417_13610 PF16124 RecQ zinc-binding KM417_13610 PF09382 RQC domain KM417_13650 PF01368 DHH family KM417_13650 PF02833 DHHA2 domain KM417_13655 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM417_13655 PF18416 N-acetylglucosamine binding protein domain 2 KM417_13670 PF02627 Carboxymuconolactone decarboxylase family KM417_13675 PF01235 Sodium:alanine symporter family KM417_13680 PF00171 Aldehyde dehydrogenase family KM417_13685 PF00701 Dihydrodipicolinate synthetase family KM417_13690 PF05544 Proline racemase KM417_13695 PF05544 Proline racemase KM417_13700 PF01266 FAD dependent oxidoreductase KM417_13705 PF00158 Sigma-54 interaction domain KM417_13705 PF13188 PAS domain KM417_13705 PF02954 Bacterial regulatory protein, Fis family KM417_13720 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_13720 PF04324 BFD-like [2Fe-2S] binding domain KM417_13735 PF08876 Domain of unknown function (DUF1836) KM417_13740 PF09335 SNARE associated Golgi protein KM417_13755 PF04914 DltD protein KM417_13760 PF13302 Acetyltransferase (GNAT) domain KM417_13760 PF03352 Methyladenine glycosylase KM417_13760 PF00117 Glutamine amidotransferase class-I KM417_13760 PF00958 GMP synthase C terminal domain KM417_13760 PF13673 Acetyltransferase (GNAT) domain KM417_13765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_13770 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain KM417_13770 PF00877 NlpC/P60 family KM417_13775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM417_13775 PF13378 Enolase C-terminal domain-like KM417_13795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM417_13820 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KM417_13820 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KM417_13825 PF00512 His Kinase A (phospho-acceptor) domain KM417_13825 PF00989 PAS fold KM417_13825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_13825 PF16736 Single Cache-like KM417_13850 PF01048 Phosphorylase superfamily KM417_13860 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM417_13865 PF08439 Oligopeptidase F KM417_13865 PF01432 Peptidase family M3 KM417_13880 PF02645 Uncharacterised protein, DegV family COG1307 KM417_13900 PF07690 Major Facilitator Superfamily KM417_13910 PF04519 Polymer-forming cytoskeletal KM417_13915 PF13171 Protein of unknown function (DUF4004) KM417_13920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_13920 PF12793 Sugar transport-related sRNA regulator N-term KM417_13925 PF07690 Major Facilitator Superfamily KM417_13945 PF04226 Transglycosylase associated protein KM417_13950 PF01156 Inosine-uridine preferring nucleoside hydrolase KM417_13960 PF08241 Methyltransferase domain KM417_13995 PF00155 Aminotransferase class I and II KM417_14000 PF07977 FabA-like domain KM417_14005 PF03630 Fumble KM417_14025 PF00005 ABC transporter KM417_14070 PF01594 AI-2E family transporter KM417_14080 PF00296 Luciferase-like monooxygenase KM417_14085 PF00528 Binding-protein-dependent transport system inner membrane component KM417_14090 PF09084 NMT1/THI5 like KM417_14095 PF00005 ABC transporter KM417_14115 PF00293 NUDIX domain KM417_14115 PF09297 NADH pyrophosphatase zinc ribbon domain KM417_14135 PF02522 Aminoglycoside 3-N-acetyltransferase KM417_14160 PF13536 Putative multidrug resistance efflux transporter KM417_14165 PF12867 DinB superfamily KM417_14185 PF08713 DNA alkylation repair enzyme KM417_14195 PF01522 Polysaccharide deacetylase KM417_14205 PF03741 Integral membrane protein TerC family KM417_14210 PF00884 Sulfatase KM417_14215 PF00005 ABC transporter KM417_14215 PF12848 ABC transporter KM417_14225 PF03176 MMPL family KM417_14230 PF03176 MMPL family KM417_14235 PF03176 MMPL family KM417_14240 PF16295 Tetracyclin repressor-like, C-terminal domain KM417_14240 PF00440 Bacterial regulatory proteins, tetR family KM417_14250 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM417_14255 PF02153 Prephenate dehydrogenase KM417_14255 PF01842 ACT domain KM417_14260 PF00155 Aminotransferase class I and II KM417_14265 PF01264 Chorismate synthase KM417_14270 PF01817 Chorismate mutase type II KM417_14270 PF00793 DAHP synthetase I family KM417_14290 PF01636 Phosphotransferase enzyme family KM417_14305 PF06725 3D domain KM417_14305 PF01476 LysM domain KM417_14315 PF08281 Sigma-70, region 4 KM417_14315 PF04542 Sigma-70 region 2 KM417_14335 PF06039 Malate:quinone oxidoreductase (Mqo) KM417_14340 PF13407 Periplasmic binding protein domain KM417_14345 PF02653 Branched-chain amino acid transport system / permease component KM417_14350 PF02653 Branched-chain amino acid transport system / permease component KM417_14355 PF00005 ABC transporter KM417_14360 PF00325 Bacterial regulatory proteins, crp family KM417_14360 PF04198 Putative sugar-binding domain KM417_14375 PF01791 DeoC/LacD family aldolase KM417_14395 PF03992 Antibiotic biosynthesis monooxygenase KM417_14415 PF01773 Na+ dependent nucleoside transporter N-terminus KM417_14415 PF07662 Na+ dependent nucleoside transporter C-terminus KM417_14420 PF00171 Aldehyde dehydrogenase family KM417_14425 PF00696 Amino acid kinase family KM417_14425 PF01472 PUA domain KM417_14430 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM417_14430 PF03807 NADP oxidoreductase coenzyme F420-dependent KM417_14435 PF01546 Peptidase family M20/M25/M40 KM417_14440 PF09339 IclR helix-turn-helix domain KM417_14440 PF01614 Bacterial transcriptional regulator KM417_14445 PF00324 Amino acid permease KM417_14450 PF01139 tRNA-splicing ligase RtcB KM417_14455 PF00487 Fatty acid desaturase KM417_14460 PF00245 Alkaline phosphatase KM417_14465 PF11188 Protein of unknown function (DUF2975) KM417_14470 PF13443 Cro/C1-type HTH DNA-binding domain KM417_14485 PF10086 YhfC intramembrane metalloprotease KM417_14495 PF04397 LytTr DNA-binding domain KM417_14495 PF00072 Response regulator receiver domain KM417_14505 PF13302 Acetyltransferase (GNAT) domain KM417_14510 PF12681 Glyoxalase-like domain KM417_14530 PF07726 ATPase family associated with various cellular activities (AAA) KM417_14530 PF17863 AAA lid domain KM417_14545 PF07690 Major Facilitator Superfamily KM417_14555 PF00535 Glycosyl transferase family 2 KM417_14570 PF00535 Glycosyl transferase family 2 KM417_14580 PF00535 Glycosyl transferase family 2 KM417_14590 PF00202 Aminotransferase class-III KM417_14595 PF00199 Catalase KM417_14595 PF06628 Catalase-related immune-responsive KM417_14605 PF13382 Adenine deaminase C-terminal domain KM417_14605 PF01979 Amidohydrolase family KM417_14610 PF00144 Beta-lactamase KM417_14630 PF17863 AAA lid domain KM417_14630 PF07726 ATPase family associated with various cellular activities (AAA) KM417_14640 PF00881 Nitroreductase family KM417_14645 PF01047 MarR family KM417_14650 PF03764 Elongation factor G, domain IV KM417_14650 PF00679 Elongation factor G C-terminus KM417_14650 PF00009 Elongation factor Tu GTP binding domain KM417_14650 PF14492 Elongation Factor G, domain II KM417_14660 PF00293 NUDIX domain KM417_14675 PF00005 ABC transporter KM417_14680 PF00392 Bacterial regulatory proteins, gntR family KM417_14690 PF00005 ABC transporter KM417_14690 PF02687 FtsX-like permease family KM417_14690 PF12704 MacB-like periplasmic core domain KM417_14715 PF12833 Helix-turn-helix domain KM417_14720 PF00583 Acetyltransferase (GNAT) family KM417_14735 PF00892 EamA-like transporter family KM417_14740 PF00155 Aminotransferase class I and II KM417_14740 PF00392 Bacterial regulatory proteins, gntR family KM417_14745 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KM417_14750 PF13031 Protein of unknown function (DUF3892) KM417_14760 PF00512 His Kinase A (phospho-acceptor) domain KM417_14760 PF00672 HAMP domain KM417_14765 PF00486 Transcriptional regulatory protein, C terminal KM417_14765 PF00072 Response regulator receiver domain KM417_14770 PF00561 alpha/beta hydrolase fold KM417_14800 PF01925 Sulfite exporter TauE/SafE KM417_14805 PF13302 Acetyltransferase (GNAT) domain KM417_14810 PF00324 Amino acid permease KM417_14820 PF08713 DNA alkylation repair enzyme KM417_14825 PF10898 Protein of unknown function (DUF2716) KM417_14845 PF00293 NUDIX domain KM417_14855 PF10502 Signal peptidase, peptidase S26 KM417_14860 PF03717 Penicillin-binding Protein dimerisation domain KM417_14860 PF00905 Penicillin binding protein transpeptidase domain KM417_14870 PF02146 Sir2 family KM417_14875 PF01470 Pyroglutamyl peptidase KM417_14895 PF03746 LamB/YcsF family KM417_14900 PF02626 Carboxyltransferase domain, subdomain A and B KM417_14905 PF02682 Carboxyltransferase domain, subdomain C and D KM417_14910 PF01614 Bacterial transcriptional regulator KM417_14910 PF09339 IclR helix-turn-helix domain KM417_14915 PF10502 Signal peptidase, peptidase S26 KM417_14920 PF03932 CutC family KM417_14925 PF07454 Stage II sporulation protein P (SpoIIP) KM417_14940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM417_14940 PF02770 Acyl-CoA dehydrogenase, middle domain KM417_14940 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KM417_14955 PF07670 Nucleoside recognition KM417_14970 PF02915 Rubrerythrin KM417_14980 PF00440 Bacterial regulatory proteins, tetR family KM417_14985 PF00391 PEP-utilising enzyme, mobile domain KM417_14985 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KM417_14990 PF00753 Metallo-beta-lactamase superfamily KM417_15005 PF07875 Coat F domain KM417_15010 PF08892 YqcI/YcgG family KM417_15015 PF01810 LysE type translocator KM417_15030 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM417_15035 PF10710 Protein of unknown function (DUF2512) KM417_15040 PF11553 Protein of unknown function (DUF3231) KM417_15045 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM417_15050 PF13823 Alcohol dehydrogenase GroES-associated KM417_15050 PF00107 Zinc-binding dehydrogenase KM417_15050 PF08240 Alcohol dehydrogenase GroES-like domain KM417_15065 PF00206 Lyase KM417_15065 PF10415 Fumarase C C-terminus KM417_15070 PF00710 Asparaginase, N-terminal KM417_15070 PF17763 Glutaminase/Asparaginase C-terminal domain KM417_15075 PF01381 Helix-turn-helix KM417_15085 PF01541 GIY-YIG catalytic domain KM417_15085 PF12826 Helix-hairpin-helix motif KM417_15085 PF08459 UvrC Helix-hairpin-helix N-terminal KM417_15085 PF02151 UvrB/uvrC motif KM417_15090 PF13520 Amino acid permease KM417_15095 PF05525 Branched-chain amino acid transport protein KM417_15100 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM417_15100 PF03807 NADP oxidoreductase coenzyme F420-dependent KM417_15105 PF13564 DoxX-like family KM417_15110 PF03949 Malic enzyme, NAD binding domain KM417_15110 PF00390 Malic enzyme, N-terminal domain KM417_15125 PF03845 Spore germination protein KM417_15135 PF08664 YcbB domain KM417_15135 PF00072 Response regulator receiver domain KM417_15145 PF04960 Glutaminase KM417_15150 PF01235 Sodium:alanine symporter family KM417_15180 PF00149 Calcineurin-like phosphoesterase KM417_15180 PF17936 Bacterial Ig domain KM417_15180 PF02872 5'-nucleotidase, C-terminal domain KM417_15185 PF00199 Catalase KM417_15185 PF06628 Catalase-related immune-responsive KM417_15190 PF00561 alpha/beta hydrolase fold KM417_15195 PF00857 Isochorismatase family KM417_15215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM417_15215 PF03466 LysR substrate binding domain KM417_15220 PF01047 MarR family KM417_15240 PF11181 Heat induced stress protein YflT KM417_15255 PF03073 TspO/MBR family KM417_15260 PF03441 FAD binding domain of DNA photolyase KM417_15260 PF00875 DNA photolyase KM417_15270 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KM417_15275 PF00361 Proton-conducting membrane transporter KM417_15275 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM417_15280 PF10057 Uncharacterized conserved protein (DUF2294) KM417_15295 PF01040 UbiA prenyltransferase family KM417_15300 PF00561 alpha/beta hydrolase fold KM417_15305 PF01297 Zinc-uptake complex component A periplasmic KM417_15310 PF00950 ABC 3 transport family KM417_15315 PF00005 ABC transporter KM417_15340 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM417_15345 PF01758 Sodium Bile acid symporter family KM417_15350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM417_15355 PF01022 Bacterial regulatory protein, arsR family KM417_15370 PF00012 Hsp70 protein KM417_15385 PF01037 Lrp/AsnC ligand binding domain KM417_15400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM417_15425 PF12833 Helix-turn-helix domain KM417_15425 PF02805 Metal binding domain of Ada KM417_15435 PF00144 Beta-lactamase KM417_15460 PF12802 MarR family KM417_15465 PF00175 Oxidoreductase NAD-binding domain KM417_15465 PF00667 FAD binding domain KM417_15465 PF00258 Flavodoxin KM417_15465 PF00067 Cytochrome P450 KM417_15470 PF07690 Major Facilitator Superfamily KM417_15495 PF00072 Response regulator receiver domain KM417_15495 PF00486 Transcriptional regulatory protein, C terminal KM417_15500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_15500 PF00672 HAMP domain KM417_15500 PF00512 His Kinase A (phospho-acceptor) domain KM417_15525 PF00291 Pyridoxal-phosphate dependent enzyme KM417_15545 PF01381 Helix-turn-helix KM417_15560 PF00753 Metallo-beta-lactamase superfamily KM417_15565 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM417_15575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM417_15575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM417_15580 PF04072 Leucine carboxyl methyltransferase KM417_15595 PF00005 ABC transporter KM417_15600 PF02687 FtsX-like permease family KM417_15615 PF00512 His Kinase A (phospho-acceptor) domain KM417_15615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_15615 PF00672 HAMP domain KM417_15620 PF00072 Response regulator receiver domain KM417_15620 PF00486 Transcriptional regulatory protein, C terminal KM417_15630 PF01047 MarR family KM417_15640 PF04299 Putative FMN-binding domain KM417_15645 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM417_15645 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM417_15650 PF07690 Major Facilitator Superfamily KM417_15655 PF02589 LUD domain KM417_15660 PF02589 LUD domain KM417_15660 PF13183 4Fe-4S dicluster domain KM417_15660 PF11870 Domain of unknown function (DUF3390) KM417_15665 PF02754 Cysteine-rich domain KM417_15670 PF03466 LysR substrate binding domain KM417_15670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM417_15680 PF17676 LD-carboxypeptidase C-terminal domain KM417_15680 PF02016 LD-carboxypeptidase N-terminal domain KM417_15700 PF07690 Major Facilitator Superfamily KM417_15705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM417_15705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM417_15710 PF05116 Sucrose-6F-phosphate phosphohydrolase KM417_15720 PF00356 Bacterial regulatory proteins, lacI family KM417_15725 PF18801 response regulator aspartate phosphatase H, N terminal KM417_15745 PF11799 impB/mucB/samB family C-terminal domain KM417_15745 PF00817 impB/mucB/samB family KM417_15745 PF11798 IMS family HHH motif KM417_15760 PF00672 HAMP domain KM417_15760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM417_15760 PF02743 Cache domain KM417_15775 PF01554 MatE KM417_15785 PF08453 Peptidase family M9 N-terminal KM417_15785 PF01752 Collagenase KM417_15785 PF18496 Collagenase G catalytic helper subdomain KM417_15795 PF07690 Major Facilitator Superfamily KM417_15800 PF00440 Bacterial regulatory proteins, tetR family KM417_15800 PF16859 Tetracyclin repressor-like, C-terminal domain KM417_15810 PF01022 Bacterial regulatory protein, arsR family KM417_15820 PF03313 Serine dehydratase alpha chain KM417_15825 PF01842 ACT domain KM417_15825 PF03315 Serine dehydratase beta chain KM417_15835 PF00202 Aminotransferase class-III KM417_15840 PF01300 Telomere recombination KM417_15840 PF00708 Acylphosphatase KM417_15840 PF07503 HypF finger KM417_15840 PF17788 HypF Kae1-like domain KM417_15845 PF00586 AIR synthase related protein, N-terminal domain KM417_15845 PF02769 AIR synthase related protein, C-terminal domain KM417_15850 PF00857 Isochorismatase family KM417_15855 PF01037 Lrp/AsnC ligand binding domain KM417_15860 PF13520 Amino acid permease KM417_15875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM417_15875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM417_15875 PF01842 ACT domain KM417_15880 PF00266 Aminotransferase class-V KM417_15895 PF08281 Sigma-70, region 4 KM417_15895 PF04542 Sigma-70 region 2 KM417_15910 PF07883 Cupin domain KM417_15915 PF01497 Periplasmic binding protein KM417_15915 PF12833 Helix-turn-helix domain KM417_15920 PF01804 Penicillin amidase KM417_15960 PF14044 NETI protein KM417_15965 PF07690 Major Facilitator Superfamily KM417_15970 PF12697 Alpha/beta hydrolase family KM417_15975 PF01047 MarR family KM417_15980 PF07690 Major Facilitator Superfamily KM417_15990 PF12679 ABC-2 family transporter protein KM417_15995 PF00005 ABC transporter KM417_15995 PF13732 Domain of unknown function (DUF4162) KM417_16000 PF13396 Phospholipase_D-nuclease N-terminal KM417_16010 PF17314 Family of unknown function (DUF5360) KM417_16015 PF00893 Small Multidrug Resistance protein KM417_16020 PF00440 Bacterial regulatory proteins, tetR family KM417_16025 PF17440 Thiol-activated cytolysin beta sandwich domain KM417_16025 PF01289 Thiol-activated cytolysin KM417_16030 PF02667 Short chain fatty acid transporter KM417_16040 PF02525 Flavodoxin-like fold KM417_16060 PF14256 YwiC-like protein KM417_16070 PF00005 ABC transporter KM417_16075 PF02361 Cobalt transport protein KM417_16090 PF03737 Aldolase/RraA KM417_16095 PF03606 C4-dicarboxylate anaerobic carrier KM417_16100 PF04231 Endonuclease I KM417_16115 PF01381 Helix-turn-helix KM417_16120 PF02660 Glycerol-3-phosphate acyltransferase KM417_16125 PF04073 Aminoacyl-tRNA editing domain KM417_16130 PF13393 Histidyl-tRNA synthetase KM417_16130 PF03129 Anticodon binding domain KM417_16145 PF01638 HxlR-like helix-turn-helix KM417_16150 PF00881 Nitroreductase family KM417_16160 PF00391 PEP-utilising enzyme, mobile domain KM417_16160 PF00224 Pyruvate kinase, barrel domain KM417_16160 PF02887 Pyruvate kinase, alpha/beta domain KM417_16180 PF00005 ABC transporter KM417_16205 PF13419 Haloacid dehalogenase-like hydrolase KM417_16215 PF13350 Tyrosine phosphatase family KM417_16240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM417_16245 PF00480 ROK family KM417_16250 PF07690 Major Facilitator Superfamily KM417_16255 PF14602 Hexapeptide repeat of succinyl-transferase KM417_16255 PF12464 Maltose acetyltransferase KM417_16265 PF02687 FtsX-like permease family KM417_16265 PF12704 MacB-like periplasmic core domain KM417_16265 PF00005 ABC transporter KM417_16275 PF00579 tRNA synthetases class I (W and Y) KM417_16280 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM417_16280 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM417_16280 PF13288 DXP reductoisomerase C-terminal domain KM417_16285 PF01594 AI-2E family transporter KM417_16305 PF08241 Methyltransferase domain KM417_16315 PF07690 Major Facilitator Superfamily KM417_16335 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM417_16345 PF01595 Cyclin M transmembrane N-terminal domain KM417_16345 PF03471 Transporter associated domain KM417_16345 PF00571 CBS domain KM417_16350 PF13411 MerR HTH family regulatory protein KM417_16355 PF00892 EamA-like transporter family KM417_16360 PF00805 Pentapeptide repeats (8 copies) KM417_16365 PF06906 Protein of unknown function (DUF1272) KM417_16370 PF10282 Lactonase, 7-bladed beta-propeller KM417_16375 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM417_16375 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM417_16380 PF02447 GntP family permease KM417_16385 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM417_16390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM417_16390 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM417_16395 PF02779 Transketolase, pyrimidine binding domain KM417_16395 PF02780 Transketolase, C-terminal domain KM417_16395 PF00456 Transketolase, thiamine diphosphate binding domain KM417_16400 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM417_16400 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM417_16405 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM417_16405 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM417_16410 PF00107 Zinc-binding dehydrogenase KM417_16410 PF08240 Alcohol dehydrogenase GroES-like domain KM417_16415 PF00296 Luciferase-like monooxygenase KM417_16425 PF02801 Beta-ketoacyl synthase, C-terminal domain KM417_16425 PF00109 Beta-ketoacyl synthase, N-terminal domain KM417_16425 PF16197 Ketoacyl-synthetase C-terminal extension KM417_16425 PF08240 Alcohol dehydrogenase GroES-like domain KM417_16425 PF00698 Acyl transferase domain KM417_16425 PF00550 Phosphopantetheine attachment site KM417_16425 PF08659 KR domain KM417_16425 PF14765 Polyketide synthase dehydratase KM417_16430 PF00106 short chain dehydrogenase KM417_16435 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM417_16435 PF01447 Thermolysin metallopeptidase, catalytic domain KM417_16435 PF03413 Peptidase propeptide and YPEB domain KM417_16435 PF07504 Fungalysin/Thermolysin Propeptide Motif KM417_16455 PF00248 Aldo/keto reductase family KM417_16460 PF07690 Major Facilitator Superfamily KM417_16470 PF03928 Haem-degrading KM417_16475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM417_16505 PF03960 ArsC family KM417_16510 PF01638 HxlR-like helix-turn-helix KM417_16515 PF07702 UTRA domain KM417_16515 PF00392 Bacterial regulatory proteins, gntR family KM417_16530 PF01638 HxlR-like helix-turn-helix KM417_16535 PF01638 HxlR-like helix-turn-helix KM417_16540 PF00248 Aldo/keto reductase family KM417_16570 PF02567 Phenazine biosynthesis-like protein KM417_16590 PF00501 AMP-binding enzyme KM417_16590 PF13193 AMP-binding enzyme C-terminal domain KM417_16600 PF01638 HxlR-like helix-turn-helix KM417_16620 PF01022 Bacterial regulatory protein, arsR family KM417_16630 PF12791 Anti-sigma factor N-terminus KM417_16635 PF04542 Sigma-70 region 2 KM417_16650 PF00440 Bacterial regulatory proteins, tetR family KM417_16670 PF05656 Protein of unknown function (DUF805) KM417_16675 PF01061 ABC-2 type transporter KM417_16680 PF00005 ABC transporter KM417_16680 PF13732 Domain of unknown function (DUF4162) KM417_16695 PF03063 Prismane/CO dehydrogenase family KM417_16705 PF00753 Metallo-beta-lactamase superfamily KM417_16710 PF01183 Glycosyl hydrolases family 25 KM417_16710 PF01471 Putative peptidoglycan binding domain KM417_16735 PF00144 Beta-lactamase KM417_16775 PF00753 Metallo-beta-lactamase superfamily KM417_16780 PF00107 Zinc-binding dehydrogenase KM417_16780 PF08240 Alcohol dehydrogenase GroES-like domain KM417_16785 PF00324 Amino acid permease KM417_16790 PF07690 Major Facilitator Superfamily KM417_16815 PF02585 GlcNAc-PI de-N-acetylase KM417_16820 PF08830 Protein of unknown function (DUF1806) KM417_16825 PF03600 Citrate transporter KM417_16845 PF01497 Periplasmic binding protein KM417_16850 PF01032 FecCD transport family KM417_16855 PF01032 FecCD transport family KM417_16860 PF05675 Protein of unknown function (DUF817) KM417_16865 PF02567 Phenazine biosynthesis-like protein KM417_16870 PF13170 Protein of unknown function (DUF4003) KM417_16885 PF10901 Protein of unknown function (DUF2690) KM417_16895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM417_16895 PF03466 LysR substrate binding domain KM417_16900 PF08240 Alcohol dehydrogenase GroES-like domain KM417_16900 PF00107 Zinc-binding dehydrogenase KM417_16915 PF01713 Smr domain KM417_16915 PF00488 MutS domain V KM417_16925 PF00128 Alpha amylase, catalytic domain KM417_16925 PF09154 Domain of unknown function (DUF1939) KM417_16940 PF00144 Beta-lactamase KM417_16950 PF07690 Major Facilitator Superfamily KM417_16955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM417_16955 PF03466 LysR substrate binding domain KM417_16970 PF03009 Glycerophosphoryl diester phosphodiesterase family KM417_16990 PF01494 FAD binding domain KM417_16995 PF01022 Bacterial regulatory protein, arsR family KM417_17000 PF00107 Zinc-binding dehydrogenase KM417_17000 PF08240 Alcohol dehydrogenase GroES-like domain KM417_17005 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KM417_17020 PF04299 Putative FMN-binding domain KM417_17025 PF04229 GrpB protein KM417_17035 PF01758 Sodium Bile acid symporter family KM417_17040 PF01565 FAD binding domain KM417_17040 PF02913 FAD linked oxidases, C-terminal domain KM417_17060 PF00132 Bacterial transferase hexapeptide (six repeats) KM417_17065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM417_17070 PF00535 Glycosyl transferase family 2 KM417_17075 PF00378 Enoyl-CoA hydratase/isomerase KM417_17080 PF08453 Peptidase family M9 N-terminal KM417_17080 PF01752 Collagenase KM417_17080 PF18496 Collagenase G catalytic helper subdomain KM417_17085 PF02308 MgtC family KM417_17100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM417_17105 PF04294 VanW like protein KM417_17115 PF13037 Domain of unknown function (DUF3898) KM417_17115 PF13039 Protein of unknown function (DUF3900) KM417_17135 PF00313 'Cold-shock' DNA-binding domain KM417_17145 PF00258 Flavodoxin KM417_17155 PF00293 NUDIX domain KM417_17165 PF00132 Bacterial transferase hexapeptide (six repeats) KM417_17175 PF00106 short chain dehydrogenase KM417_17185 PF14698 Argininosuccinate lyase C-terminal KM417_17185 PF00206 Lyase KM417_17195 PF01156 Inosine-uridine preferring nucleoside hydrolase KM417_17200 PF00474 Sodium:solute symporter family KM417_17210 PF00171 Aldehyde dehydrogenase family KM417_17220 PF14151 YfhD-like protein KM417_17225 PF13249 Squalene-hopene cyclase N-terminal domain KM417_17225 PF13243 Squalene-hopene cyclase C-terminal domain KM417_17230 PF02681 Divergent PAP2 family KM417_17235 PF00892 EamA-like transporter family KM417_17240 PF06961 Protein of unknown function (DUF1294) KM417_17255 PF10609 NUBPL iron-transfer P-loop NTPase KM417_17265 PF02391 MoaE protein KM417_17270 PF03453 MoeA N-terminal region (domain I and II) KM417_17270 PF00994 Probable molybdopterin binding domain KM417_17270 PF03454 MoeA C-terminal region (domain IV) KM417_17275 PF00899 ThiF family KM417_17280 PF01226 Formate/nitrite transporter KM417_17285 PF06463 Molybdenum Cofactor Synthesis C KM417_17285 PF04055 Radical SAM superfamily KM417_17290 PF02634 FdhD/NarQ family KM417_17295 PF10057 Uncharacterized conserved protein (DUF2294) KM417_17300 PF07849 Protein of unknown function (DUF1641) KM417_17305 PF00037 4Fe-4S binding domain KM417_17305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM417_17305 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM417_17305 PF00384 Molybdopterin oxidoreductase KM417_17305 PF01568 Molydopterin dinucleotide binding domain KM417_17310 PF03323 Bacillus/Clostridium GerA spore germination protein KM417_17350 PF08241 Methyltransferase domain KM417_17355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_17360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_17365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_17370 PF00375 Sodium:dicarboxylate symporter family KM417_17375 PF03816 Cell envelope-related transcriptional attenuator domain KM417_17385 PF08281 Sigma-70, region 4 KM417_17385 PF04542 Sigma-70 region 2 KM417_17405 PF13732 Domain of unknown function (DUF4162) KM417_17405 PF00005 ABC transporter KM417_17415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM417_17415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM417_17420 PF03989 DNA gyrase C-terminal domain, beta-propeller KM417_17420 PF00521 DNA gyrase/topoisomerase IV, subunit A KM417_17425 PF00204 DNA gyrase B KM417_17425 PF00986 DNA gyrase B subunit, carboxyl terminus KM417_17425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_17425 PF01751 Toprim domain KM417_17430 PF13380 CoA binding domain KM417_17435 PF13180 PDZ domain KM417_17440 PF00072 Response regulator receiver domain KM417_17440 PF00486 Transcriptional regulatory protein, C terminal KM417_17450 PF03477 ATP cone domain KM417_17450 PF13597 Anaerobic ribonucleoside-triphosphate reductase KM417_17455 PF02660 Glycerol-3-phosphate acyltransferase KM417_17460 PF01521 Iron-sulphur cluster biosynthesis KM417_17465 PF03061 Thioesterase superfamily KM417_17470 PF01476 LysM domain KM417_17470 PF00704 Glycosyl hydrolases family 18 KM417_17480 PF08177 Small acid-soluble spore protein N family KM417_17485 PF13040 Fur-regulated basic protein B KM417_17490 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM417_17490 PF11490 DNA polymerase III polC-type N-terminus II KM417_17490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM417_17490 PF14579 Helix-hairpin-helix motif KM417_17490 PF02811 PHP domain KM417_17490 PF00929 Exonuclease KM417_17490 PF01336 OB-fold nucleic acid binding domain KM417_17495 PF00578 AhpC/TSA family KM417_17505 PF00005 ABC transporter KM417_17505 PF00664 ABC transporter transmembrane region KM417_17505 PF03412 Peptidase C39 family KM417_17510 PF00330 Aconitase family (aconitate hydratase) KM417_17510 PF00694 Aconitase C-terminal domain KM417_17520 PF01522 Polysaccharide deacetylase KM417_17550 PF02272 DHHA1 domain KM417_17550 PF01411 tRNA synthetases class II (A) KM417_17550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM417_17555 PF13344 Haloacid dehalogenase-like hydrolase KM417_17555 PF00293 NUDIX domain KM417_17565 PF02803 Thiolase, C-terminal domain KM417_17565 PF00108 Thiolase, N-terminal domain KM417_17570 PF00501 AMP-binding enzyme KM417_17570 PF13193 AMP-binding enzyme C-terminal domain KM417_17575 PF02632 BioY family KM417_17580 PF13193 AMP-binding enzyme C-terminal domain KM417_17580 PF00501 AMP-binding enzyme KM417_17600 PF05532 CsbD-like KM417_17630 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM417_17630 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM417_17640 PF00989 PAS fold KM417_17640 PF13188 PAS domain KM417_17640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_17640 PF00512 His Kinase A (phospho-acceptor) domain KM417_17640 PF13426 PAS domain KM417_17645 PF01738 Dienelactone hydrolase family KM417_17650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM417_17655 PF00474 Sodium:solute symporter family KM417_17660 PF01645 Conserved region in glutamate synthase KM417_17665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM417_17670 PF02559 CarD-like/TRCF domain KM417_17675 PF00491 Arginase family KM417_17680 PF01979 Amidohydrolase family KM417_17685 PF17392 Urocanase C-terminal domain KM417_17685 PF17391 Urocanase N-terminal domain KM417_17685 PF01175 Urocanase Rossmann-like domain KM417_17690 PF00221 Aromatic amino acid lyase KM417_17695 PF09021 HutP KM417_17700 PF01209 ubiE/COQ5 methyltransferase family KM417_17720 PF11084 Protein of unknown function (DUF2621) KM417_17755 PF07301 Protein of unknown function (DUF1453) KM417_17760 PF02683 Cytochrome C biogenesis protein transmembrane region KM417_17770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM417_17770 PF03466 LysR substrate binding domain KM417_17775 PF03788 LrgA family KM417_17780 PF04172 LrgB-like family KM417_17785 PF13344 Haloacid dehalogenase-like hydrolase KM417_17785 PF00293 NUDIX domain KM417_17805 PF01510 N-acetylmuramoyl-L-alanine amidase KM417_17805 PF01471 Putative peptidoglycan binding domain KM417_17820 PF00005 ABC transporter KM417_17820 PF00664 ABC transporter transmembrane region KM417_17825 PF00005 ABC transporter KM417_17825 PF00664 ABC transporter transmembrane region KM417_17830 PF03672 Uncharacterised protein family (UPF0154) KM417_17835 PF10747 Sporulation inhibitor of replication protein SirA KM417_17840 PF02779 Transketolase, pyrimidine binding domain KM417_17840 PF00456 Transketolase, thiamine diphosphate binding domain KM417_17840 PF02780 Transketolase, C-terminal domain KM417_17845 PF01385 Probable transposase KM417_17845 PF12323 Helix-turn-helix domain KM417_17845 PF07282 Putative transposase DNA-binding domain KM417_17850 PF00528 Binding-protein-dependent transport system inner membrane component KM417_17855 PF00528 Binding-protein-dependent transport system inner membrane component KM417_17860 PF00005 ABC transporter KM417_17875 PF05979 Bacterial protein of unknown function (DUF896) KM417_17880 PF00239 Resolvase, N terminal domain KM417_17885 PF01726 LexA DNA binding domain KM417_17885 PF00717 Peptidase S24-like KM417_17900 PF03551 Transcriptional regulator PadR-like family KM417_17935 PF01510 N-acetylmuramoyl-L-alanine amidase KM417_17935 PF01471 Putative peptidoglycan binding domain KM417_17935 PF01476 LysM domain KM417_17940 PF05105 Bacteriophage holin family KM417_18095 PF08281 Sigma-70, region 4 KM417_18140 PF02511 Thymidylate synthase complementing protein KM417_18145 PF00145 C-5 cytosine-specific DNA methylase KM417_18220 PF01381 Helix-turn-helix KM417_18240 PF02899 Phage integrase, N-terminal SAM-like domain KM417_18240 PF00589 Phage integrase family KM417_18245 PF03951 Glutamine synthetase, beta-Grasp domain KM417_18245 PF00120 Glutamine synthetase, catalytic domain KM417_18250 PF13411 MerR HTH family regulatory protein KM417_18255 PF06838 Methionine gamma-lyase KM417_18265 PF03458 UPF0126 domain KM417_18275 PF17866 AAA lid domain KM417_18275 PF00004 ATPase family associated with various cellular activities (AAA) KM417_18290 PF17209 Hfq protein KM417_18305 PF01476 LysM domain KM417_18305 PF06725 3D domain KM417_18310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM417_18310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM417_18315 PF00294 pfkB family carbohydrate kinase KM417_18320 PF00455 DeoR C terminal sensor domain KM417_18320 PF08220 DeoR-like helix-turn-helix domain KM417_18330 PF04238 Protein of unknown function (DUF420) KM417_18340 PF00324 Amino acid permease KM417_18345 PF00041 Fibronectin type III domain KM417_18345 PF00704 Glycosyl hydrolases family 18 KM417_18355 PF00149 Calcineurin-like phosphoesterase KM417_18355 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM417_18360 PF01226 Formate/nitrite transporter KM417_18365 PF00216 Bacterial DNA-binding protein KM417_18370 PF00403 Heavy-metal-associated domain KM417_18375 PF00403 Heavy-metal-associated domain KM417_18380 PF02583 Metal-sensitive transcriptional repressor KM417_18390 PF00756 Putative esterase KM417_18395 PF00005 ABC transporter KM417_18400 PF01032 FecCD transport family KM417_18405 PF01032 FecCD transport family KM417_18415 PF03372 Endonuclease/Exonuclease/phosphatase family KM417_18420 PF12833 Helix-turn-helix domain KM417_18420 PF02805 Metal binding domain of Ada KM417_18425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM417_18425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM417_18430 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain KM417_18430 PF00730 HhH-GPD superfamily base excision DNA repair protein KM417_18435 PF07687 Peptidase dimerisation domain KM417_18435 PF01546 Peptidase family M20/M25/M40 KM417_18455 PF00561 alpha/beta hydrolase fold KM417_18460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM417_18465 PF00563 EAL domain KM417_18465 PF00990 Diguanylate cyclase, GGDEF domain KM417_18465 PF03707 Bacterial signalling protein N terminal repeat KM417_18475 PF10787 Uncharacterised protein from bacillus cereus group KM417_18480 PF04172 LrgB-like family KM417_18485 PF03788 LrgA family KM417_18490 PF00155 Aminotransferase class I and II KM417_18490 PF00392 Bacterial regulatory proteins, gntR family KM417_18495 PF00561 alpha/beta hydrolase fold KM417_18495 PF00364 Biotin-requiring enzyme KM417_18500 PF02585 GlcNAc-PI de-N-acetylase KM417_18515 PF00388 Phosphatidylinositol-specific phospholipase C, X domain KM417_18520 PF00082 Subtilase family KM417_18525 PF07486 Cell Wall Hydrolase KM417_18530 PF03275 UDP-galactopyranose mutase KM417_18535 PF00884 Sulfatase KM417_18540 PF00350 Dynamin family KM417_18550 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KM417_18555 PF00512 His Kinase A (phospho-acceptor) domain KM417_18555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_18560 PF00486 Transcriptional regulatory protein, C terminal KM417_18560 PF00072 Response regulator receiver domain KM417_18575 PF00005 ABC transporter KM417_18580 PF01119 DNA mismatch repair protein, C-terminal domain KM417_18580 PF08676 MutL C terminal dimerisation domain KM417_18585 PF05188 MutS domain II KM417_18585 PF05192 MutS domain III KM417_18585 PF05190 MutS family domain IV KM417_18585 PF00488 MutS domain V KM417_18585 PF01624 MutS domain I KM417_18590 PF10628 Outer spore coat protein E (CotE) KM417_18595 PF06133 Control of competence regulator ComK, YlbF/YmcA KM417_18600 PF04055 Radical SAM superfamily KM417_18600 PF01938 TRAM domain KM417_18600 PF00919 Uncharacterized protein family UPF0004 KM417_18605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM417_18610 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KM417_18610 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KM417_18610 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KM417_18615 PF01244 Membrane dipeptidase (Peptidase family M19) KM417_18620 PF04232 Stage V sporulation protein S (SpoVS) KM417_18625 PF13277 YmdB-like protein KM417_18630 PF00013 KH domain KM417_18630 PF01966 HD domain KM417_18630 PF12072 Domain of unknown function (DUF3552) KM417_18635 PF00154 recA bacterial DNA recombination protein KM417_18645 PF18146 Damage-inducible protein CinA KH domain KM417_18645 PF02464 Competence-damaged protein KM417_18645 PF00994 Probable molybdopterin binding domain KM417_18650 PF01066 CDP-alcohol phosphatidyltransferase KM417_18655 PF13464 Domain of unknown function (DUF4115) KM417_18660 PF11868 Protein of unknown function (DUF3388) KM417_18665 PF11588 Protein of unknown function (DUF3243) KM417_18675 PF05193 Peptidase M16 inactive domain KM417_18675 PF00675 Insulinase (Peptidase family M16) KM417_18680 PF05193 Peptidase M16 inactive domain KM417_18685 PF02653 Branched-chain amino acid transport system / permease component KM417_18695 PF00005 ABC transporter KM417_18700 PF02608 ABC transporter substrate-binding protein PnrA-like KM417_18705 PF00392 Bacterial regulatory proteins, gntR family KM417_18705 PF07702 UTRA domain KM417_18710 PF09397 Ftsk gamma domain KM417_18710 PF17854 FtsK alpha domain KM417_18710 PF01580 FtsK/SpoIIIE family KM417_18715 PF14035 YlzJ-like protein KM417_18720 PF00574 Clp protease KM417_18725 PF00753 Metallo-beta-lactamase superfamily KM417_18725 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM417_18725 PF17770 Ribonuclease J C-terminal domain KM417_18730 PF00701 Dihydrodipicolinate synthetase family KM417_18735 PF13840 ACT domain KM417_18735 PF00696 Amino acid kinase family KM417_18740 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM417_18740 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM417_18745 PF02441 Flavoprotein KM417_18750 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM417_18750 PF16924 Dipicolinate synthase subunit A N-terminal domain KM417_18755 PF05239 PRC-barrel domain KM417_18760 PF00675 Insulinase (Peptidase family M16) KM417_18760 PF05193 Peptidase M16 inactive domain KM417_18765 PF01522 Polysaccharide deacetylase KM417_18770 PF00013 KH domain KM417_18770 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KM417_18770 PF00575 S1 RNA binding domain KM417_18770 PF03725 3' exoribonuclease family, domain 2 KM417_18770 PF01138 3' exoribonuclease family, domain 1 KM417_18775 PF00312 Ribosomal protein S15 KM417_18780 PF01687 Riboflavin kinase KM417_18780 PF06574 FAD synthetase KM417_18785 PF01509 TruB family pseudouridylate synthase (N terminal domain) KM417_18785 PF16198 tRNA pseudouridylate synthase B C-terminal domain KM417_18790 PF02033 Ribosome-binding factor A KM417_18795 PF04456 Protein of unknown function (DUF503) KM417_18800 PF04760 Translation initiation factor IF-2, N-terminal region KM417_18800 PF11987 Translation-initiation factor 2 KM417_18800 PF00009 Elongation factor Tu GTP binding domain KM417_18805 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM417_18810 PF04296 Protein of unknown function (DUF448) KM417_18815 PF13184 NusA-like KH domain KM417_18815 PF08529 NusA N-terminal domain KM417_18815 PF00575 S1 RNA binding domain KM417_18820 PF17384 RimP C-terminal SH3 domain KM417_18820 PF02576 RimP N-terminal domain KM417_18825 PF14480 DNA polymerase III polC-type N-terminus I KM417_18825 PF11490 DNA polymerase III polC-type N-terminus II KM417_18825 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM417_18825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM417_18825 PF14579 Helix-hairpin-helix motif KM417_18825 PF02811 PHP domain KM417_18825 PF00929 Exonuclease KM417_18830 PF03129 Anticodon binding domain KM417_18830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM417_18830 PF04073 Aminoacyl-tRNA editing domain KM417_18835 PF17820 PDZ domain KM417_18835 PF02163 Peptidase family M50 KM417_18840 PF13288 DXP reductoisomerase C-terminal domain KM417_18840 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM417_18840 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM417_18850 PF01255 Putative undecaprenyl diphosphate synthase KM417_18855 PF01765 Ribosome recycling factor KM417_18860 PF00696 Amino acid kinase family KM417_18865 PF00889 Elongation factor TS KM417_18870 PF00318 Ribosomal protein S2 KM417_18875 PF06018 CodY GAF-like domain KM417_18875 PF08222 CodY helix-turn-helix domain KM417_18880 PF00004 ATPase family associated with various cellular activities (AAA) KM417_18880 PF07724 AAA domain (Cdc48 subfamily) KM417_18880 PF10431 C-terminal, D2-small domain, of ClpB protein KM417_18885 PF00227 Proteasome subunit KM417_18890 PF02899 Phage integrase, N-terminal SAM-like domain KM417_18890 PF00589 Phage integrase family KM417_18895 PF01134 Glucose inhibited division protein A KM417_18900 PF01131 DNA topoisomerase KM417_18900 PF01751 Toprim domain KM417_18900 PF01396 Topoisomerase DNA binding C4 zinc finger KM417_18910 PF00549 CoA-ligase KM417_18910 PF02629 CoA binding domain KM417_18915 PF00549 CoA-ligase KM417_18915 PF08442 ATP-grasp domain KM417_18920 PF01351 Ribonuclease HII KM417_18925 PF01926 50S ribosome-binding GTPase KM417_18930 PF10502 Signal peptidase, peptidase S26 KM417_18935 PF01245 Ribosomal protein L19 KM417_18940 PF01746 tRNA (Guanine-1)-methyltransferase KM417_18945 PF01782 RimM N-terminal domain KM417_18945 PF05239 PRC-barrel domain KM417_18955 PF00886 Ribosomal protein S16 KM417_18960 PF00448 SRP54-type protein, GTPase domain KM417_18960 PF02881 SRP54-type protein, helical bundle domain KM417_18960 PF02978 Signal peptide binding domain KM417_18965 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KM417_18970 PF00448 SRP54-type protein, GTPase domain KM417_18970 PF02881 SRP54-type protein, helical bundle domain KM417_18975 PF06470 SMC proteins Flexible Hinge Domain KM417_18975 PF02463 RecF/RecN/SMC N terminal domain KM417_18980 PF00035 Double-stranded RNA binding motif KM417_18980 PF14622 Ribonuclease-III-like KM417_18985 PF00550 Phosphopantetheine attachment site KM417_18995 PF00698 Acyl transferase domain KM417_19000 PF02504 Fatty acid synthesis protein KM417_19005 PF03061 Thioesterase superfamily KM417_19010 PF00270 DEAD/DEAH box helicase KM417_19010 PF17191 RecG wedge domain KM417_19010 PF00271 Helicase conserved C-terminal domain KM417_19015 PF02734 DAK2 domain KM417_19015 PF13684 Dihydroxyacetone kinase family KM417_19020 PF03780 Asp23 family, cell envelope-related function KM417_19025 PF00830 Ribosomal L28 family KM417_19030 PF08183 Stage V sporulation protein family KM417_19035 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KM417_19035 PF04263 Thiamin pyrophosphokinase, catalytic domain KM417_19040 PF00834 Ribulose-phosphate 3 epimerase family KM417_19045 PF16745 RsgA N-terminal domain KM417_19045 PF03193 RsgA GTPase KM417_19050 PF03793 PASTA domain KM417_19050 PF00069 Protein kinase domain KM417_19060 PF04055 Radical SAM superfamily KM417_19065 PF01029 NusB family KM417_19065 PF01189 16S rRNA methyltransferase RsmB/F KM417_19070 PF00551 Formyl transferase KM417_19070 PF02911 Formyl transferase, C-terminal domain KM417_19075 PF01327 Polypeptide deformylase KM417_19080 PF17764 3′ DNA-binding domain (3′BD) KM417_19080 PF04851 Type III restriction enzyme, res subunit KM417_19080 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KM417_19080 PF18074 Primosomal protein N C-terminal domain KM417_19080 PF00271 Helicase conserved C-terminal domain KM417_19085 PF04127 DNA / pantothenate metabolism flavoprotein KM417_19085 PF02441 Flavoprotein KM417_19090 PF01192 RNA polymerase Rpb6 KM417_19095 PF00625 Guanylate kinase KM417_19100 PF04025 Domain of unknown function (DUF370) KM417_19105 PF03755 YicC-like family, N-terminal region KM417_19105 PF08340 Domain of unknown function (DUF1732) KM417_19110 PF00689 Cation transporting ATPase, C-terminus KM417_19110 PF00690 Cation transporter/ATPase, N-terminus KM417_19115 PF05670 NFACT protein RNA binding domain KM417_19120 PF00557 Metallopeptidase family M24 KM417_19120 PF01321 Creatinase/Prolidase N-terminal domain KM417_19150 PF00156 Phosphoribosyl transferase domain KM417_19155 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KM417_19160 PF01180 Dihydroorotate dehydrogenase KM417_19165 PF00175 Oxidoreductase NAD-binding domain KM417_19165 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KM417_19170 PF02142 MGS-like domain KM417_19170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM417_19170 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KM417_19175 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KM417_19175 PF00117 Glutamine amidotransferase class-I KM417_19180 PF01979 Amidohydrolase family KM417_19185 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM417_19185 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM417_19190 PF00860 Permease family KM417_19195 PF00156 Phosphoribosyl transferase domain KM417_19200 PF01479 S4 domain KM417_19200 PF00849 RNA pseudouridylate synthase KM417_19205 PF01252 Signal peptidase (SPase) II KM417_19215 PF08264 Anticodon-binding domain of tRNA KM417_19215 PF00133 tRNA synthetases class I (I, L, M and V) KM417_19215 PF06827 Zinc finger found in FPG and IleRS KM417_19220 PF05103 DivIVA protein KM417_19225 PF17774 Putative RNA-binding domain in YlmH KM417_19225 PF01479 S4 domain KM417_19230 PF02325 YGGT family KM417_19235 PF04472 Cell division protein SepF KM417_19240 PF01168 Alanine racemase, N-terminal domain KM417_19245 PF02578 Multi-copper polyphenol oxidoreductase laccase KM417_19250 PF05239 PRC-barrel domain KM417_19255 PF04542 Sigma-70 region 2 KM417_19255 PF04539 Sigma-70 region 3 KM417_19255 PF04545 Sigma-70, region 4 KM417_19260 PF04545 Sigma-70, region 4 KM417_19260 PF04542 Sigma-70 region 2 KM417_19265 PF03419 Sporulation factor SpoIIGA KM417_19270 PF00091 Tubulin/FtsZ family, GTPase domain KM417_19270 PF12327 FtsZ family, C-terminal domain KM417_19275 PF02491 SHS2 domain inserted in FTSA KM417_19280 PF08478 POTRA domain, FtsQ-type KM417_19280 PF03799 Cell division protein FtsQ KM417_19285 PF01565 FAD binding domain KM417_19285 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM417_19290 PF03033 Glycosyltransferase family 28 N-terminal domain KM417_19290 PF04101 Glycosyltransferase family 28 C-terminal domain KM417_19295 PF01098 Cell cycle protein KM417_19300 PF08245 Mur ligase middle domain KM417_19300 PF02875 Mur ligase family, glutamate ligase domain KM417_19305 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KM417_19305 PF00953 Glycosyl transferase family 4 KM417_19310 PF01225 Mur ligase family, catalytic domain KM417_19310 PF02875 Mur ligase family, glutamate ligase domain KM417_19310 PF08245 Mur ligase middle domain KM417_19315 PF00905 Penicillin binding protein transpeptidase domain KM417_19315 PF03717 Penicillin-binding Protein dimerisation domain KM417_19315 PF03793 PASTA domain KM417_19320 PF03793 PASTA domain KM417_19320 PF03717 Penicillin-binding Protein dimerisation domain KM417_19320 PF00905 Penicillin binding protein transpeptidase domain KM417_19325 PF04977 Septum formation initiator KM417_19330 PF01795 MraW methylase family KM417_19335 PF10079 Bacillithiol biosynthesis BshC KM417_19340 PF02558 Ketopantoate reductase PanE/ApbA KM417_19340 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM417_19345 PF00583 Acetyltransferase (GNAT) family KM417_19355 PF01783 Ribosomal L32p protein family KM417_19360 PF02620 Large ribosomal RNA subunit accumulation protein YceD KM417_19405 PF12123 N-acetylmuramoyl-l-alanine amidase KM417_19405 PF01510 N-acetylmuramoyl-L-alanine amidase KM417_19410 PF05105 Bacteriophage holin family KM417_19485 PF00574 Clp protease KM417_19495 PF03354 Phage Terminase KM417_19515 PF10137 Predicted nucleotide-binding protein containing TIR-like domain KM417_19520 PF00589 Phage integrase family KM417_19570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM417_19585 PF00692 dUTPase KM417_19600 PF04542 Sigma-70 region 2 KM417_19600 PF04539 Sigma-70 region 3 KM417_19600 PF04545 Sigma-70, region 4 KM417_19625 PF01695 IstB-like ATP binding protein KM417_19625 PF07319 Primosomal protein DnaI N-terminus KM417_19655 PF01381 Helix-turn-helix KM417_19670 PF01381 Helix-turn-helix KM417_19685 PF00589 Phage integrase family KM417_19685 PF14659 Phage integrase, N-terminal SAM-like domain KM417_19690 PF05636 HIGH Nucleotidyl Transferase KM417_19695 PF05362 Lon protease (S16) C-terminal proteolytic domain KM417_19695 PF13180 PDZ domain KM417_19700 PF01734 Patatin-like phospholipase KM417_19705 PF07670 Nucleoside recognition KM417_19710 PF01467 Cytidylyltransferase-like KM417_19725 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KM417_19730 PF06133 Control of competence regulator ComK, YlbF/YmcA KM417_19735 PF00300 Histidine phosphatase superfamily (branch 1) KM417_19740 PF14003 YlbE-like protein KM417_19745 PF14071 Putative coat protein KM417_19750 PF14504 CAP-associated N-terminal KM417_19750 PF00188 Cysteine-rich secretory protein family KM417_19755 PF08868 YugN-like family KM417_19760 PF00795 Carbon-nitrogen hydrolase KM417_19765 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KM417_19770 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KM417_19775 PF00510 Cytochrome c oxidase subunit III KM417_19780 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM417_19785 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KM417_19785 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM417_19785 PF00034 Cytochrome c KM417_19790 PF01040 UbiA prenyltransferase family KM417_19795 PF02628 Cytochrome oxidase assembly protein KM417_19800 PF02436 Conserved carboxylase domain KM417_19800 PF00682 HMGL-like KM417_19800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM417_19800 PF00364 Biotin-requiring enzyme KM417_19800 PF00289 Biotin carboxylase, N-terminal domain KM417_19800 PF02785 Biotin carboxylase C-terminal domain KM417_19805 PF01098 Cell cycle protein KM417_19810 PF07408 Protein of unknown function (DUF1507) KM417_19820 PF13638 PIN domain KM417_19820 PF02562 PhoH-like protein KM417_19830 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KM417_19840 PF14036 YlaH-like protein KM417_19845 PF14492 Elongation Factor G, domain II KM417_19845 PF00679 Elongation factor G C-terminus KM417_19845 PF03144 Elongation factor Tu domain 2 KM417_19845 PF00009 Elongation factor Tu GTP binding domain KM417_19855 PF00459 Inositol monophosphatase family KM417_19865 PF06335 Protein of unknown function (DUF1054) KM417_19870 PF05256 Uncharacterised protein family (UPF0223) KM417_19875 PF01276 Orn/Lys/Arg decarboxylase, major domain KM417_19875 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM417_19915 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_19915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM417_19920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM417_19920 PF00364 Biotin-requiring enzyme KM417_19920 PF02817 e3 binding domain KM417_19925 PF02780 Transketolase, C-terminal domain KM417_19925 PF02779 Transketolase, pyrimidine binding domain KM417_19930 PF00676 Dehydrogenase E1 component KM417_19940 PF01327 Polypeptide deformylase KM417_19950 PF07288 Protein of unknown function (DUF1447) KM417_19955 PF00753 Metallo-beta-lactamase superfamily KM417_19955 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM417_19955 PF17770 Ribonuclease J C-terminal domain KM417_19960 PF02080 TrkA-C domain KM417_19960 PF02254 TrkA-N domain KM417_19970 PF07687 Peptidase dimerisation domain KM417_19970 PF01546 Peptidase family M20/M25/M40 KM417_19975 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KM417_19975 PF00132 Bacterial transferase hexapeptide (six repeats) KM417_19975 PF14602 Hexapeptide repeat of succinyl-transferase KM417_19980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM417_19980 PF03466 LysR substrate binding domain KM417_19995 PF04308 Ribonuclease H-like KM417_20005 PF08796 Protein of unknown function (DUF1797) KM417_20020 PF10388 EAL-domain associated signalling protein domain KM417_20020 PF00563 EAL domain KM417_20030 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM417_20030 PF00149 Calcineurin-like phosphoesterase KM417_20040 PF02503 Polyphosphate kinase middle domain KM417_20040 PF13090 Polyphosphate kinase C-terminal domain 2 KM417_20040 PF17941 Polyphosphate kinase C-terminal domain 1 KM417_20040 PF13089 Polyphosphate kinase N-terminal domain KM417_20045 PF02541 Ppx/GppA phosphatase family KM417_20050 PF14177 YkyB-like protein KM417_20075 PF07690 Major Facilitator Superfamily KM417_20085 PF08267 Cobalamin-independent synthase, N-terminal domain KM417_20085 PF01717 Cobalamin-independent synthase, Catalytic domain KM417_20095 PF14040 Deoxyribonuclease NucA/NucB KM417_20105 PF00512 His Kinase A (phospho-acceptor) domain KM417_20105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_20115 PF00155 Aminotransferase class I and II KM417_20120 PF00356 Bacterial regulatory proteins, lacI family KM417_20120 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM417_20125 PF00528 Binding-protein-dependent transport system inner membrane component KM417_20130 PF00528 Binding-protein-dependent transport system inner membrane component KM417_20135 PF13416 Bacterial extracellular solute-binding protein KM417_20140 PF16657 Maltogenic Amylase, C-terminal domain KM417_20140 PF00128 Alpha amylase, catalytic domain KM417_20140 PF02903 Alpha amylase, N-terminal ig-like domain KM417_20145 PF16657 Maltogenic Amylase, C-terminal domain KM417_20145 PF00128 Alpha amylase, catalytic domain KM417_20150 PF00005 ABC transporter KM417_20150 PF17912 MalK OB fold domain KM417_20150 PF03459 TOBE domain KM417_20190 PF02803 Thiolase, C-terminal domain KM417_20190 PF00108 Thiolase, N-terminal domain KM417_20195 PF00293 NUDIX domain KM417_20225 PF03551 Transcriptional regulator PadR-like family KM417_20240 PF01008 Initiation factor 2 subunit family KM417_20245 PF01636 Phosphotransferase enzyme family KM417_20250 PF00795 Carbon-nitrogen hydrolase KM417_20255 PF00155 Aminotransferase class I and II KM417_20260 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KM417_20260 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KM417_20270 PF00596 Class II Aldolase and Adducin N-terminal domain KM417_20275 PF03079 ARD/ARD' family KM417_20295 PF08448 PAS fold KM417_20295 PF00990 Diguanylate cyclase, GGDEF domain KM417_20300 PF00881 Nitroreductase family KM417_20315 PF05524 PEP-utilising enzyme, N-terminal KM417_20315 PF00391 PEP-utilising enzyme, mobile domain KM417_20315 PF02896 PEP-utilising enzyme, TIM barrel domain KM417_20320 PF00381 PTS HPr component phosphorylation site KM417_20325 PF02378 Phosphotransferase system, EIIC KM417_20325 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM417_20325 PF00367 phosphotransferase system, EIIB KM417_20330 PF03123 CAT RNA binding domain KM417_20330 PF00874 PRD domain KM417_20340 PF00392 Bacterial regulatory proteins, gntR family KM417_20340 PF07702 UTRA domain KM417_20345 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KM417_20350 PF01979 Amidohydrolase family KM417_20360 PF04079 Segregation and condensation complex subunit ScpB KM417_20365 PF02616 Segregation and condensation protein ScpA KM417_20375 PF03745 Domain of unknown function (DUF309) KM417_20380 PF00583 Acetyltransferase (GNAT) family KM417_20385 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KM417_20390 PF06207 Protein of unknown function (DUF1002) KM417_20400 PF03323 Bacillus/Clostridium GerA spore germination protein KM417_20405 PF14097 Stage V sporulation protein AE1 KM417_20410 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM417_20415 PF07451 Stage V sporulation protein AD (SpoVAD) KM417_20420 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM417_20425 PF13782 Stage V sporulation protein AB KM417_20430 PF12164 Stage V sporulation protein AA KM417_20440 PF00209 Sodium:neurotransmitter symporter family KM417_20445 PF04545 Sigma-70, region 4 KM417_20445 PF04539 Sigma-70 region 3 KM417_20445 PF04542 Sigma-70 region 2 KM417_20450 PF13581 Histidine kinase-like ATPase domain KM417_20455 PF01740 STAS domain KM417_20460 PF00768 D-alanyl-D-alanine carboxypeptidase KM417_20460 PF07943 Penicillin-binding protein 5, C-terminal domain KM417_20465 PF00392 Bacterial regulatory proteins, gntR family KM417_20470 PF00005 ABC transporter KM417_20485 PF01047 MarR family KM417_20495 PF00860 Permease family KM417_20500 PF01544 CorA-like Mg2+ transporter protein KM417_20505 PF02885 Glycosyl transferase family, helical bundle domain KM417_20505 PF00591 Glycosyl transferase family, a/b domain KM417_20505 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM417_20510 PF01048 Phosphorylase superfamily KM417_20515 PF01676 Metalloenzyme superfamily KM417_20525 PF02899 Phage integrase, N-terminal SAM-like domain KM417_20525 PF00589 Phage integrase family KM417_20530 PF14004 Protein of unknown function (DUF4227) KM417_20535 PF01475 Ferric uptake regulator family KM417_20540 PF01944 Stage II sporulation protein M KM417_20550 PF00293 NUDIX domain KM417_20555 PF13072 Mother cell inhibitor of FtsZ KM417_20560 PF00248 Aldo/keto reductase family KM417_20565 PF00248 Aldo/keto reductase family KM417_20570 PF13673 Acetyltransferase (GNAT) domain KM417_20570 PF04229 GrpB protein KM417_20580 PF02872 5'-nucleotidase, C-terminal domain KM417_20580 PF00746 LPXTG cell wall anchor motif KM417_20580 PF00149 Calcineurin-like phosphoesterase KM417_20580 PF00565 Staphylococcal nuclease homologue KM417_20590 PF12146 Serine aminopeptidase, S33 KM417_20595 PF03553 Na+/H+ antiporter family KM417_20595 PF13726 Na+-H+ antiporter family KM417_20600 PF00356 Bacterial regulatory proteins, lacI family KM417_20605 PF00583 Acetyltransferase (GNAT) family KM417_20610 PF12146 Serine aminopeptidase, S33 KM417_20615 PF10827 Protein of unknown function (DUF2552) KM417_20625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM417_20625 PF01872 RibD C-terminal domain KM417_20630 PF00677 Lumazine binding domain KM417_20635 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KM417_20635 PF00925 GTP cyclohydrolase II KM417_20640 PF00885 6,7-dimethyl-8-ribityllumazine synthase KM417_20650 PF06968 Biotin and Thiamin Synthesis associated domain KM417_20650 PF04055 Radical SAM superfamily KM417_20655 PF13847 Methyltransferase domain KM417_20660 PF12697 Alpha/beta hydrolase family KM417_20660 PF08241 Methyltransferase domain KM417_20665 PF00155 Aminotransferase class I and II KM417_20675 PF00202 Aminotransferase class-III KM417_20685 PF03553 Na+/H+ antiporter family KM417_20690 PF02872 5'-nucleotidase, C-terminal domain KM417_20690 PF00149 Calcineurin-like phosphoesterase KM417_20700 PF13404 AsnC-type helix-turn-helix domain KM417_20700 PF01037 Lrp/AsnC ligand binding domain KM417_20715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM417_20715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM417_20720 PF00202 Aminotransferase class-III KM417_20725 PF00696 Amino acid kinase family KM417_20730 PF01960 ArgJ family KM417_20735 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM417_20735 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM417_20745 PF00106 short chain dehydrogenase KM417_20755 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM417_20755 PF03807 NADP oxidoreductase coenzyme F420-dependent KM417_20760 PF03313 Serine dehydratase alpha chain KM417_20765 PF03315 Serine dehydratase beta chain KM417_20765 PF01842 ACT domain KM417_20775 PF00753 Metallo-beta-lactamase superfamily KM417_20775 PF12706 Beta-lactamase superfamily domain KM417_20785 PF00817 impB/mucB/samB family KM417_20785 PF11799 impB/mucB/samB family C-terminal domain KM417_20785 PF11798 IMS family HHH motif KM417_20795 PF01546 Peptidase family M20/M25/M40 KM417_20795 PF07687 Peptidase dimerisation domain KM417_20800 PF13302 Acetyltransferase (GNAT) domain KM417_20815 PF03734 L,D-transpeptidase catalytic domain KM417_20820 PF11728 Putative aromatic acid exporter C-terminal domain KM417_20820 PF06081 Aromatic acid exporter family member 1 KM417_20825 PF00005 ABC transporter KM417_20830 PF00528 Binding-protein-dependent transport system inner membrane component KM417_20835 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM417_20840 PF06491 Disulphide isomerase KM417_20845 PF11208 Protein of unknown function (DUF2992) KM417_20855 PF01098 Cell cycle protein KM417_20860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM417_20860 PF02817 e3 binding domain KM417_20860 PF00364 Biotin-requiring enzyme KM417_20865 PF02780 Transketolase, C-terminal domain KM417_20865 PF02779 Transketolase, pyrimidine binding domain KM417_20870 PF00676 Dehydrogenase E1 component KM417_20875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM417_20875 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_20880 PF00871 Acetokinase family KM417_20885 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM417_20885 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM417_20890 PF01515 Phosphate acetyl/butaryl transferase KM417_20895 PF02954 Bacterial regulatory protein, Fis family KM417_20895 PF00158 Sigma-54 interaction domain KM417_20895 PF00989 PAS fold KM417_20905 PF03009 Glycerophosphoryl diester phosphodiesterase family KM417_20910 PF14174 YycC-like protein KM417_20920 PF08769 Sporulation initiation factor Spo0A C terminal KM417_20920 PF00072 Response regulator receiver domain KM417_20925 PF17820 PDZ domain KM417_20925 PF05580 SpoIVB peptidase S55 KM417_20930 PF13476 AAA domain KM417_20935 PF01316 Arginine repressor, DNA binding domain KM417_20935 PF02863 Arginine repressor, C-terminal domain KM417_20940 PF01479 S4 domain KM417_20940 PF01728 FtsJ-like methyltransferase KM417_20945 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KM417_20945 PF02779 Transketolase, pyrimidine binding domain KM417_20945 PF02780 Transketolase, C-terminal domain KM417_20950 PF00348 Polyprenyl synthetase KM417_20955 PF02609 Exonuclease VII small subunit KM417_20960 PF13742 OB-fold nucleic acid binding domain KM417_20960 PF02601 Exonuclease VII, large subunit KM417_20965 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KM417_20965 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KM417_20970 PF01029 NusB family KM417_20975 PF03780 Asp23 family, cell envelope-related function KM417_20980 PF02785 Biotin carboxylase C-terminal domain KM417_20980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM417_20980 PF00289 Biotin carboxylase, N-terminal domain KM417_20985 PF00364 Biotin-requiring enzyme KM417_20995 PF12685 SpoIIIAH-like protein KM417_21005 PF09581 Stage III sporulation protein AF (Spore_III_AF) KM417_21010 PF09546 Stage III sporulation protein AE (spore_III_AE) KM417_21015 PF06686 Stage III sporulation protein AC/AD protein family KM417_21020 PF06686 Stage III sporulation protein AC/AD protein family KM417_21025 PF09548 Stage III sporulation protein AB (spore_III_AB) KM417_21050 PF01132 Elongation factor P (EF-P) OB domain KM417_21050 PF08207 Elongation factor P (EF-P) KOW-like domain KM417_21050 PF09285 Elongation factor P, C-terminal KM417_21055 PF01321 Creatinase/Prolidase N-terminal domain KM417_21055 PF00557 Metallopeptidase family M24 KM417_21060 PF01220 Dehydroquinase class II KM417_21065 PF11085 Conserved membrane protein YqhR KM417_21070 PF07136 Protein of unknown function (DUF1385) KM417_21080 PF13419 Haloacid dehalogenase-like hydrolase KM417_21085 PF02742 Iron dependent repressor, metal binding and dimerisation domain KM417_21085 PF01325 Iron dependent repressor, N-terminal DNA binding domain KM417_21100 PF03099 Biotin/lipoate A/B protein ligase family KM417_21105 PF00581 Rhodanese-like domain KM417_21110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM417_21110 PF00356 Bacterial regulatory proteins, lacI family KM417_21120 PF00893 Small Multidrug Resistance protein KM417_21125 PF00893 Small Multidrug Resistance protein KM417_21160 PF00005 ABC transporter KM417_21165 PF00392 Bacterial regulatory proteins, gntR family KM417_21180 PF02347 Glycine cleavage system P-protein KM417_21185 PF02347 Glycine cleavage system P-protein KM417_21190 PF01571 Aminomethyltransferase folate-binding domain KM417_21190 PF08669 Glycine cleavage T-protein C-terminal barrel domain KM417_21195 PF00271 Helicase conserved C-terminal domain KM417_21195 PF00176 SNF2 family N-terminal domain KM417_21200 PF11079 Bacterial protein YqhG of unknown function KM417_21220 PF14038 YqzE-like protein KM417_21225 PF01202 Shikimate kinase KM417_21250 PF07963 Prokaryotic N-terminal methylation motif KM417_21260 PF00482 Type II secretion system (T2SS), protein F KM417_21265 PF00437 Type II/IV secretion system protein KM417_21275 PF11117 Protein of unknown function (DUF2626) KM417_21280 PF00375 Sodium:dicarboxylate symporter family KM417_21315 PF04101 Glycosyltransferase family 28 C-terminal domain KM417_21315 PF03033 Glycosyltransferase family 28 N-terminal domain KM417_21320 PF02607 B12 binding domain KM417_21320 PF02310 B12 binding domain KM417_21320 PF02965 Vitamin B12 dependent methionine synthase, activation domain KM417_21320 PF00809 Pterin binding enzyme KM417_21320 PF02574 Homocysteine S-methyltransferase KM417_21325 PF02219 Methylenetetrahydrofolate reductase KM417_21325 PF02574 Homocysteine S-methyltransferase KM417_21330 PF01053 Cys/Met metabolism PLP-dependent enzyme KM417_21335 PF01053 Cys/Met metabolism PLP-dependent enzyme KM417_21345 PF01022 Bacterial regulatory protein, arsR family KM417_21355 PF00753 Metallo-beta-lactamase superfamily KM417_21360 PF10958 Protein of unknown function (DUF2759) KM417_21365 PF00480 ROK family KM417_21370 PF06014 Bacterial protein of unknown function (DUF910) KM417_21375 PF01812 5-formyltetrahydrofolate cyclo-ligase family KM417_21380 PF00471 Ribosomal protein L33 KM417_21385 PF00483 Nucleotidyl transferase KM417_21390 PF01895 PhoU domain KM417_21395 PF00005 ABC transporter KM417_21400 PF00528 Binding-protein-dependent transport system inner membrane component KM417_21405 PF00528 Binding-protein-dependent transport system inner membrane component KM417_21410 PF12849 PBP superfamily domain KM417_21415 PF03717 Penicillin-binding Protein dimerisation domain KM417_21415 PF00905 Penicillin binding protein transpeptidase domain KM417_21420 PF07690 Major Facilitator Superfamily KM417_21425 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM417_21425 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM417_21445 PF04551 GcpE protein KM417_21450 PF01475 Ferric uptake regulator family KM417_21455 PF00950 ABC 3 transport family KM417_21460 PF00005 ABC transporter KM417_21465 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM417_21465 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM417_21470 PF11116 Protein of unknown function (DUF2624) KM417_21475 PF01261 Xylose isomerase-like TIM barrel KM417_21480 PF00271 Helicase conserved C-terminal domain KM417_21480 PF00270 DEAD/DEAH box helicase KM417_21490 PF02401 LytB protein KM417_21495 PF01784 NIF3 (NGG1p interacting factor 3) KM417_21500 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KM417_21505 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM417_21510 PF04542 Sigma-70 region 2 KM417_21510 PF04545 Sigma-70, region 4 KM417_21510 PF03979 Sigma-70 factor, region 1.1 KM417_21510 PF00140 Sigma-70 factor, region 1.2 KM417_21510 PF04539 Sigma-70 region 3 KM417_21515 PF10410 DnaB-helicase binding domain of primase KM417_21515 PF01807 CHC2 zinc finger KM417_21515 PF08275 DNA primase catalytic core, N-terminal domain KM417_21520 PF03618 Kinase/pyrophosphorylase KM417_21525 PF08279 HTH domain KM417_21525 PF00571 CBS domain KM417_21530 PF11967 Recombination protein O N terminal KM417_21530 PF02565 Recombination protein O C terminal KM417_21540 PF01926 50S ribosome-binding GTPase KM417_21540 PF07650 KH domain KM417_21545 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM417_21550 PF01219 Prokaryotic diacylglycerol kinase KM417_21555 PF02130 Uncharacterized protein family UPF0054 KM417_21560 PF07697 7TM-HD extracellular KM417_21560 PF01966 HD domain KM417_21560 PF07698 7TM receptor with intracellular HD hydrolase KM417_21565 PF02562 PhoH-like protein KM417_21570 PF06898 Putative stage IV sporulation protein YqfD KM417_21575 PF07873 YabP family KM417_21580 PF09424 Yqey-like protein KM417_21585 PF01165 Ribosomal protein S21 KM417_21590 PF00919 Uncharacterized protein family UPF0004 KM417_21590 PF04055 Radical SAM superfamily KM417_21590 PF01938 TRAM domain KM417_21595 PF04452 RNA methyltransferase KM417_21605 PF00226 DnaJ domain KM417_21605 PF01556 DnaJ C terminal domain KM417_21605 PF00684 DnaJ central domain KM417_21610 PF00012 Hsp70 protein KM417_21615 PF01025 GrpE KM417_21620 PF01628 HrcA protein C terminal domain KM417_21625 PF04055 Radical SAM superfamily KM417_21625 PF06969 HemN C-terminal domain KM417_21630 PF01638 HxlR-like helix-turn-helix KM417_21635 PF00679 Elongation factor G C-terminus KM417_21635 PF00009 Elongation factor Tu GTP binding domain KM417_21635 PF06421 GTP-binding protein LepA C-terminus KM417_21635 PF03144 Elongation factor Tu domain 2 KM417_21645 PF03418 Germination protease KM417_21650 PF01649 Ribosomal protein S20 KM417_21655 PF06144 DNA polymerase III, delta subunit KM417_21660 PF14141 YqzM-like protein KM417_21665 PF03772 Competence protein KM417_21665 PF00753 Metallo-beta-lactamase superfamily KM417_21665 PF13567 Domain of unknown function (DUF4131) KM417_21670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM417_21675 PF10531 SLBB domain KM417_21680 PF03807 NADP oxidoreductase coenzyme F420-dependent KM417_21680 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM417_21685 PF13649 Methyltransferase domain KM417_21695 PF01966 HD domain KM417_21700 PF01467 Cytidylyltransferase-like KM417_21705 PF01985 CRS1 / YhbY (CRM) domain KM417_21710 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KM417_21710 PF01488 Shikimate / quinate 5-dehydrogenase KM417_21710 PF08501 Shikimate dehydrogenase substrate binding domain KM417_21715 PF01926 50S ribosome-binding GTPase KM417_21730 PF02666 Phosphatidylserine decarboxylase KM417_21735 PF04542 Sigma-70 region 2 KM417_21735 PF04545 Sigma-70, region 4 KM417_21745 PF16244 Domain of unknown function (DUF4901) KM417_21750 PF00471 Ribosomal protein L33 KM417_21755 PF00881 Nitroreductase family KM417_21760 PF04607 Region found in RelA / SpoT proteins KM417_21770 PF00245 Alkaline phosphatase KM417_21780 PF00561 alpha/beta hydrolase fold KM417_21780 PF08386 TAP-like protein KM417_21815 PF13860 FlgD Ig-like domain KM417_21815 PF05922 Peptidase inhibitor I9 KM417_21815 PF02225 PA domain KM417_21815 PF00082 Subtilase family KM417_21820 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KM417_21835 PF07681 DoxX KM417_21865 PF00005 ABC transporter KM417_21870 PF01032 FecCD transport family KM417_21875 PF01497 Periplasmic binding protein KM417_21880 PF14143 YrhC-like protein KM417_21885 PF00171 Aldehyde dehydrogenase family KM417_21885 PF00465 Iron-containing alcohol dehydrogenase KM417_21890 PF01053 Cys/Met metabolism PLP-dependent enzyme KM417_21895 PF00291 Pyridoxal-phosphate dependent enzyme KM417_21900 PF01048 Phosphorylase superfamily KM417_21905 PF08241 Methyltransferase domain KM417_21920 PF03717 Penicillin-binding Protein dimerisation domain KM417_21920 PF00905 Penicillin binding protein transpeptidase domain KM417_21925 PF01272 Transcription elongation factor, GreA/GreB, C-term KM417_21925 PF03449 Transcription elongation factor, N-terminal KM417_21930 PF00485 Phosphoribulokinase / Uridine kinase family KM417_21935 PF01136 Peptidase family U32 KM417_21935 PF16325 Peptidase family U32 C-terminal domain KM417_21940 PF01136 Peptidase family U32 KM417_21945 PF01596 O-methyltransferase KM417_21950 PF02618 YceG-like family KM417_21955 PF06949 Protein of unknown function (DUF1292) KM417_21960 PF03652 Holliday junction resolvase KM417_21965 PF06135 IreB regulatory phosphoprotein KM417_21970 PF01411 tRNA synthetases class II (A) KM417_21970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM417_21970 PF02272 DHHA1 domain KM417_21980 PF01594 AI-2E family transporter KM417_22000 PF14490 Helix-hairpin-helix containing domain KM417_22000 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KM417_22000 PF13538 UvrD-like helicase C-terminal domain KM417_22015 PF00266 Aminotransferase class-V KM417_22020 PF02082 Transcriptional regulator KM417_22025 PF12002 MgsA AAA+ ATPase C terminal KM417_22025 PF16193 AAA C-terminal domain KM417_22025 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM417_22035 PF00899 ThiF family KM417_22040 PF02938 GAD domain KM417_22040 PF00152 tRNA synthetases class II (D, K and N) KM417_22040 PF01336 OB-fold nucleic acid binding domain KM417_22045 PF13393 Histidyl-tRNA synthetase KM417_22045 PF03129 Anticodon binding domain KM417_22055 PF02580 D-Tyr-tRNA(Tyr) deacylase KM417_22060 PF04607 Region found in RelA / SpoT proteins KM417_22060 PF02824 TGS domain KM417_22060 PF13291 ACT domain KM417_22065 PF00156 Phosphoribosyl transferase domain KM417_22070 PF17768 RecJ OB domain KM417_22070 PF02272 DHHA1 domain KM417_22070 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KM417_22070 PF01368 DHH family KM417_22075 PF16916 Dimerisation domain of Zinc Transporter KM417_22075 PF01545 Cation efflux family KM417_22080 PF07549 SecD/SecF GG Motif KM417_22080 PF02355 Protein export membrane protein KM417_22085 PF13797 Post-transcriptional regulator KM417_22090 PF01943 Polysaccharide biosynthesis protein KM417_22090 PF14667 Polysaccharide biosynthesis C-terminal domain KM417_22095 PF04239 Protein of unknown function (DUF421) KM417_22105 PF02699 Preprotein translocase subunit KM417_22110 PF01702 Queuine tRNA-ribosyltransferase KM417_22115 PF02547 Queuosine biosynthesis protein KM417_22120 PF11146 Protein of unknown function (DUF2905) KM417_22125 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM417_22125 PF17864 RuvB AAA lid domain KM417_22125 PF05491 RuvB C-terminal winged helix domain KM417_22130 PF07499 RuvA, C-terminal domain KM417_22130 PF01330 RuvA N terminal domain KM417_22135 PF01497 Periplasmic binding protein KM417_22145 PF00892 EamA-like transporter family KM417_22150 PF00892 EamA-like transporter family KM417_22155 PF01022 Bacterial regulatory protein, arsR family KM417_22170 PF01476 LysM domain KM417_22175 PF02445 Quinolinate synthetase A protein KM417_22180 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KM417_22180 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KM417_22185 PF00890 FAD binding domain KM417_22185 PF02910 Fumarate reductase flavoprotein C-term KM417_22190 PF00266 Aminotransferase class-V KM417_22195 PF02829 3H domain KM417_22195 PF08279 HTH domain KM417_22200 PF03475 3-alpha domain KM417_22200 PF03473 MOSC domain KM417_22205 PF01842 ACT domain KM417_22205 PF00800 Prephenate dehydratase KM417_22210 PF02687 FtsX-like permease family KM417_22215 PF02687 FtsX-like permease family KM417_22220 PF00005 ABC transporter KM417_22230 PF00072 Response regulator receiver domain KM417_22230 PF00486 Transcriptional regulatory protein, C terminal KM417_22235 PF09269 Domain of unknown function (DUF1967) KM417_22235 PF01926 50S ribosome-binding GTPase KM417_22235 PF01018 GTP1/OBG KM417_22240 PF14682 Sporulation initiation phospho-transferase B, C-terminal KM417_22240 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM417_22245 PF01016 Ribosomal L27 protein KM417_22250 PF04327 Cysteine protease Prp KM417_22255 PF00829 Ribosomal prokaryotic L21 protein KM417_22260 PF10150 Ribonuclease E/G family KM417_22260 PF00575 S1 RNA binding domain KM417_22265 PF02163 Peptidase family M50 KM417_22270 PF01551 Peptidase family M23 KM417_22275 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KM417_22280 PF03775 Septum formation inhibitor MinC, C-terminal domain KM417_22290 PF04085 rod shape-determining protein MreC KM417_22300 PF04002 RadC-like JAB domain KM417_22305 PF02545 Maf-like protein KM417_22315 PF08245 Mur ligase middle domain KM417_22315 PF02875 Mur ligase family, glutamate ligase domain KM417_22320 PF08264 Anticodon-binding domain of tRNA KM417_22320 PF00133 tRNA synthetases class I (I, L, M and V) KM417_22320 PF10458 Valyl tRNA synthetase tRNA binding arm KM417_22330 PF01476 LysM domain KM417_22335 PF00202 Aminotransferase class-III KM417_22340 PF00490 Delta-aminolevulinic acid dehydratase KM417_22345 PF02602 Uroporphyrinogen-III synthase HemD KM417_22350 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KM417_22350 PF03900 Porphobilinogen deaminase, C-terminal domain KM417_22355 PF01578 Cytochrome C assembly protein KM417_22360 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KM417_22360 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KM417_22360 PF01488 Shikimate / quinate 5-dehydrogenase KM417_22365 PF01047 MarR family KM417_22370 PF02566 OsmC-like protein KM417_22375 PF01926 50S ribosome-binding GTPase KM417_22380 PF05362 Lon protease (S16) C-terminal proteolytic domain KM417_22380 PF02190 ATP-dependent protease La (LON) substrate-binding domain KM417_22380 PF00004 ATPase family associated with various cellular activities (AAA) KM417_22385 PF00004 ATPase family associated with various cellular activities (AAA) KM417_22385 PF05362 Lon protease (S16) C-terminal proteolytic domain KM417_22390 PF07724 AAA domain (Cdc48 subfamily) KM417_22390 PF10431 C-terminal, D2-small domain, of ClpB protein KM417_22390 PF06689 ClpX C4-type zinc finger KM417_22395 PF05697 Bacterial trigger factor protein (TF) KM417_22395 PF05698 Bacterial trigger factor protein (TF) C-terminus KM417_22395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM417_22410 PF08000 Bacterial PH domain KM417_22410 PF11724 YvbH-like oligomerisation region KM417_22430 PF12850 Calcineurin-like phosphoesterase superfamily domain KM417_22435 PF01725 Ham1 family KM417_22440 PF01138 3' exoribonuclease family, domain 1 KM417_22440 PF03725 3' exoribonuclease family, domain 2 KM417_22445 PF10646 Sporulation and spore germination KM417_22450 PF01177 Asp/Glu/Hydantoin racemase KM417_22455 PF07690 Major Facilitator Superfamily KM417_22465 PF00440 Bacterial regulatory proteins, tetR family KM417_22480 PF00196 Bacterial regulatory proteins, luxR family KM417_22485 PF00860 Permease family KM417_22495 PF07969 Amidohydrolase family KM417_22500 PF07969 Amidohydrolase family KM417_22505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_22510 PF00528 Binding-protein-dependent transport system inner membrane component KM417_22510 PF12911 N-terminal TM domain of oligopeptide transport permease C KM417_22515 PF00528 Binding-protein-dependent transport system inner membrane component KM417_22520 PF00005 ABC transporter KM417_22520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM417_22525 PF00005 ABC transporter KM417_22525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM417_22530 PF07694 5TMR of 5TMR-LYT KM417_22530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_22530 PF06580 Histidine kinase KM417_22535 PF04397 LytTr DNA-binding domain KM417_22535 PF00072 Response regulator receiver domain KM417_22550 PF04024 PspC domain KM417_22555 PF07883 Cupin domain KM417_22555 PF01381 Helix-turn-helix KM417_22560 PF13536 Putative multidrug resistance efflux transporter KM417_22565 PF00230 Major intrinsic protein KM417_22570 PF02082 Transcriptional regulator KM417_22580 PF00005 ABC transporter KM417_22580 PF13732 Domain of unknown function (DUF4162) KM417_22585 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KM417_22595 PF01618 MotA/TolQ/ExbB proton channel family KM417_22600 PF02557 D-alanyl-D-alanine carboxypeptidase KM417_22605 PF03061 Thioesterase superfamily KM417_22610 PF13085 2Fe-2S iron-sulfur cluster binding domain KM417_22610 PF13183 4Fe-4S dicluster domain KM417_22615 PF00890 FAD binding domain KM417_22615 PF02910 Fumarate reductase flavoprotein C-term KM417_22620 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KM417_22625 PF10702 Protein of unknown function (DUF2507) KM417_22630 PF08459 UvrC Helix-hairpin-helix N-terminal KM417_22630 PF02151 UvrB/uvrC motif KM417_22630 PF01541 GIY-YIG catalytic domain KM417_22635 PF00085 Thioredoxin KM417_22640 PF01012 Electron transfer flavoprotein domain KM417_22640 PF00766 Electron transfer flavoprotein FAD-binding domain KM417_22645 PF01012 Electron transfer flavoprotein domain KM417_22650 PF00378 Enoyl-CoA hydratase/isomerase KM417_22655 PF08359 YsiA-like protein, C-terminal region KM417_22655 PF00440 Bacterial regulatory proteins, tetR family KM417_22660 PF00501 AMP-binding enzyme KM417_22660 PF13193 AMP-binding enzyme C-terminal domain KM417_22670 PF01497 Periplasmic binding protein KM417_22675 PF01032 FecCD transport family KM417_22680 PF05163 DinB family KM417_22710 PF00005 ABC transporter KM417_22715 PF00512 His Kinase A (phospho-acceptor) domain KM417_22715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_22720 PF00486 Transcriptional regulatory protein, C terminal KM417_22720 PF00072 Response regulator receiver domain KM417_22730 PF09962 Uncharacterized conserved protein (DUF2196) KM417_22735 PF10672 S-adenosylmethionine-dependent methyltransferase KM417_22735 PF17785 PUA-like domain KM417_22745 PF03992 Antibiotic biosynthesis monooxygenase KM417_22750 PF04203 Sortase domain KM417_22755 PF00005 ABC transporter KM417_22760 PF01032 FecCD transport family KM417_22765 PF01497 Periplasmic binding protein KM417_22770 PF05031 Iron Transport-associated domain KM417_22780 PF05031 Iron Transport-associated domain KM417_22785 PF05525 Branched-chain amino acid transport protein KM417_22790 PF00849 RNA pseudouridylate synthase KM417_22790 PF01479 S4 domain KM417_22795 PF00488 MutS domain V KM417_22795 PF01713 Smr domain KM417_22800 PF14716 Helix-hairpin-helix domain KM417_22800 PF02811 PHP domain KM417_22800 PF14791 DNA polymerase beta thumb KM417_22805 PF02674 Colicin V production protein KM417_22810 PF05164 Cell division protein ZapA KM417_22815 PF11858 Domain of unknown function (DUF3378) KM417_22815 PF01351 Ribonuclease HII KM417_22835 PF00152 tRNA synthetases class II (D, K and N) KM417_22835 PF01336 OB-fold nucleic acid binding domain KM417_22840 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KM417_22840 PF03484 tRNA synthetase B5 domain KM417_22840 PF03483 B3/4 domain KM417_22840 PF01588 Putative tRNA binding domain KM417_22840 PF03147 Ferredoxin-fold anticodon binding domain KM417_22845 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KM417_22845 PF01409 tRNA synthetases class II core domain (F) KM417_22850 PF00588 SpoU rRNA Methylase family KM417_22850 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM417_22855 PF14098 Small, acid-soluble spore protein I KM417_22860 PF01966 HD domain KM417_22885 PF07690 Major Facilitator Superfamily KM417_22895 PF16859 Tetracyclin repressor-like, C-terminal domain KM417_22895 PF00440 Bacterial regulatory proteins, tetR family KM417_22900 PF05343 M42 glutamyl aminopeptidase KM417_22910 PF00453 Ribosomal protein L20 KM417_22915 PF01632 Ribosomal protein L35 KM417_22920 PF00707 Translation initiation factor IF-3, C-terminal domain KM417_22920 PF05198 Translation initiation factor IF-3, N-terminal domain KM417_22925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM417_22925 PF03129 Anticodon binding domain KM417_22925 PF02824 TGS domain KM417_22925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM417_22930 PF08812 YtxC-like family KM417_22935 PF01695 IstB-like ATP binding protein KM417_22935 PF07319 Primosomal protein DnaI N-terminus KM417_22940 PF07261 Replication initiation and membrane attachment KM417_22945 PF03477 ATP cone domain KM417_22950 PF02675 S-adenosylmethionine decarboxylase KM417_22955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM417_22955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM417_22960 PF01121 Dephospho-CoA kinase KM417_22965 PF02659 Putative manganese efflux pump KM417_22970 PF06827 Zinc finger found in FPG and IleRS KM417_22970 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KM417_22970 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KM417_22975 PF00476 DNA polymerase family A KM417_22975 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM417_22975 PF01367 5'-3' exonuclease, C-terminal SAM fold KM417_22980 PF00989 PAS fold KM417_22980 PF16736 Single Cache-like KM417_22980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_22980 PF00512 His Kinase A (phospho-acceptor) domain KM417_22985 PF00072 Response regulator receiver domain KM417_22985 PF00486 Transcriptional regulatory protein, C terminal KM417_23000 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM417_23000 PF00056 lactate/malate dehydrogenase, NAD binding domain KM417_23005 PF00180 Isocitrate/isopropylmalate dehydrogenase KM417_23010 PF00285 Citrate synthase, C-terminal domain KM417_23015 PF04284 Protein of unknown function (DUF441) KM417_23020 PF01594 AI-2E family transporter KM417_23025 PF04186 FxsA cytoplasmic membrane protein KM417_23030 PF00391 PEP-utilising enzyme, mobile domain KM417_23030 PF00224 Pyruvate kinase, barrel domain KM417_23030 PF02887 Pyruvate kinase, alpha/beta domain KM417_23035 PF00365 Phosphofructokinase KM417_23040 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KM417_23045 PF01039 Carboxyl transferase domain KM417_23045 PF17848 Acetyl-coA carboxylase zinc finger domain KM417_23050 PF00392 Bacterial regulatory proteins, gntR family KM417_23055 PF03949 Malic enzyme, NAD binding domain KM417_23055 PF00390 Malic enzyme, N-terminal domain KM417_23060 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM417_23060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM417_23060 PF14579 Helix-hairpin-helix motif KM417_23060 PF02811 PHP domain KM417_23060 PF01336 OB-fold nucleic acid binding domain KM417_23065 PF14034 Sporulation protein YtrH KM417_23075 PF01368 DHH family KM417_23075 PF02272 DHHA1 domain KM417_23080 PF14007 YtpI-like protein KM417_23095 PF00392 Bacterial regulatory proteins, gntR family KM417_23095 PF07085 DRTGG domain KM417_23095 PF03061 Thioesterase superfamily KM417_23095 PF00571 CBS domain KM417_23110 PF01321 Creatinase/Prolidase N-terminal domain KM417_23110 PF00557 Metallopeptidase family M24 KM417_23115 PF11518 Protein of unknown function (DUF3221) KM417_23145 PF12746 GNAT acetyltransferase KM417_23150 PF07883 Cupin domain KM417_23160 PF01381 Helix-turn-helix KM417_23170 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM417_23170 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM417_23180 PF00582 Universal stress protein family KM417_23200 PF14698 Argininosuccinate lyase C-terminal KM417_23200 PF00206 Lyase KM417_23205 PF00764 Arginosuccinate synthase KM417_23220 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM417_23220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM417_23225 PF12787 EcsC protein family KM417_23240 PF00871 Acetokinase family KM417_23245 PF02384 N-6 DNA Methylase KM417_23250 PF08534 Redoxin KM417_23255 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM417_23265 PF01513 ATP-NAD kinase KM417_23270 PF07969 Amidohydrolase family KM417_23280 PF00501 AMP-binding enzyme KM417_23280 PF13193 AMP-binding enzyme C-terminal domain KM417_23285 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM417_23290 PF02926 THUMP domain KM417_23290 PF02568 Thiamine biosynthesis protein (ThiI) KM417_23295 PF00266 Aminotransferase class-V KM417_23300 PF06160 Septation ring formation regulator, EzrA KM417_23305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM417_23305 PF03466 LysR substrate binding domain KM417_23310 PF00892 EamA-like transporter family KM417_23320 PF13185 GAF domain KM417_23325 PF01053 Cys/Met metabolism PLP-dependent enzyme KM417_23330 PF00163 Ribosomal protein S4/S9 N-terminal domain KM417_23330 PF01479 S4 domain KM417_23345 PF00579 tRNA synthetases class I (W and Y) KM417_23345 PF01479 S4 domain KM417_23355 PF08281 Sigma-70, region 4 KM417_23355 PF04542 Sigma-70 region 2 KM417_23365 PF00501 AMP-binding enzyme KM417_23365 PF13193 AMP-binding enzyme C-terminal domain KM417_23370 PF00583 Acetyltransferase (GNAT) family KM417_23375 PF00571 CBS domain KM417_23380 PF00850 Histone deacetylase domain KM417_23390 PF00072 Response regulator receiver domain KM417_23390 PF00486 Transcriptional regulatory protein, C terminal KM417_23395 PF00512 His Kinase A (phospho-acceptor) domain KM417_23395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_23395 PF00672 HAMP domain KM417_23395 PF13426 PAS domain KM417_23400 PF12796 Ankyrin repeats (3 copies) KM417_23405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM417_23410 PF01741 Large-conductance mechanosensitive channel, MscL KM417_23435 PF00356 Bacterial regulatory proteins, lacI family KM417_23440 PF07537 CamS sex pheromone cAM373 precursor KM417_23445 PF11009 Protein of unknown function (DUF2847) KM417_23455 PF02073 Thermophilic metalloprotease (M29) KM417_23475 PF13302 Acetyltransferase (GNAT) domain KM417_23480 PF01225 Mur ligase family, catalytic domain KM417_23480 PF08245 Mur ligase middle domain KM417_23480 PF02875 Mur ligase family, glutamate ligase domain KM417_23490 PF09397 Ftsk gamma domain KM417_23490 PF01580 FtsK/SpoIIIE family KM417_23490 PF17854 FtsK alpha domain KM417_23500 PF14794 Domain of unknown function (DUF4479) KM417_23500 PF01588 Putative tRNA binding domain KM417_23505 PF07285 Protein of unknown function (DUF1444) KM417_23510 PF00085 Thioredoxin KM417_23515 PF01931 Protein of unknown function DUF84 KM417_23520 PF05343 M42 glutamyl aminopeptidase KM417_23530 PF00753 Metallo-beta-lactamase superfamily KM417_23535 PF02390 Putative methyltransferase KM417_23540 PF14165 YtzH-like protein KM417_23545 PF01636 Phosphotransferase enzyme family KM417_23550 PF00128 Alpha amylase, catalytic domain KM417_23550 PF17999 Pullulanase N1-terminal domain KM417_23550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM417_23555 PF02834 LigT like Phosphoesterase KM417_23565 PF08220 DeoR-like helix-turn-helix domain KM417_23570 PF00849 RNA pseudouridylate synthase KM417_23570 PF01479 S4 domain KM417_23575 PF01943 Polysaccharide biosynthesis protein KM417_23575 PF14667 Polysaccharide biosynthesis C-terminal domain KM417_23585 PF07690 Major Facilitator Superfamily KM417_23590 PF01022 Bacterial regulatory protein, arsR family KM417_23595 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KM417_23605 PF10957 Sporulation protein Cse60 KM417_23615 PF02559 CarD-like/TRCF domain KM417_23625 PF06800 Sugar transport protein KM417_23640 PF02391 MoaE protein KM417_23645 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KM417_23650 PF00994 Probable molybdopterin binding domain KM417_23650 PF03454 MoeA C-terminal region (domain IV) KM417_23650 PF03453 MoeA N-terminal region (domain I and II) KM417_23655 PF01967 MoaC family KM417_23660 PF00899 ThiF family KM417_23685 PF00581 Rhodanese-like domain KM417_23695 PF00561 alpha/beta hydrolase fold KM417_23700 PF03323 Bacillus/Clostridium GerA spore germination protein KM417_23705 PF03845 Spore germination protein KM417_23730 PF08264 Anticodon-binding domain of tRNA KM417_23730 PF00133 tRNA synthetases class I (I, L, M and V) KM417_23730 PF13603 Leucyl-tRNA synthetase, Domain 2 KM417_23730 PF09334 tRNA synthetases class I (M) KM417_23735 PF07690 Major Facilitator Superfamily KM417_23740 PF00999 Sodium/hydrogen exchanger family KM417_23745 PF02080 TrkA-C domain KM417_23750 PF00589 Phage integrase family KM417_23760 PF00005 ABC transporter KM417_23765 PF07786 Protein of unknown function (DUF1624) KM417_23765 PF04235 Protein of unknown function (DUF418) KM417_23775 PF10732 Protein of unknown function (DUF2524) KM417_23780 PF04055 Radical SAM superfamily KM417_23780 PF16199 Radical_SAM C-terminal domain KM417_23785 PF06962 Putative rRNA methylase KM417_23790 PF13732 Domain of unknown function (DUF4162) KM417_23790 PF00005 ABC transporter KM417_23800 PF01177 Asp/Glu/Hydantoin racemase KM417_23815 PF10776 Protein of unknown function (DUF2600) KM417_23820 PF12146 Serine aminopeptidase, S33 KM417_23830 PF01569 PAP2 superfamily KM417_23835 PF13439 Glycosyltransferase Family 4 KM417_23835 PF00534 Glycosyl transferases group 1 KM417_23840 PF12804 MobA-like NTP transferase domain KM417_23845 PF00994 Probable molybdopterin binding domain KM417_23860 PF00438 S-adenosylmethionine synthetase, N-terminal domain KM417_23860 PF02772 S-adenosylmethionine synthetase, central domain KM417_23860 PF02773 S-adenosylmethionine synthetase, C-terminal domain KM417_23865 PF01293 Phosphoenolpyruvate carboxykinase KM417_23900 PF01784 NIF3 (NGG1p interacting factor 3) KM417_23905 PF13426 PAS domain KM417_23905 PF13188 PAS domain KM417_23905 PF00989 PAS fold KM417_23905 PF00512 His Kinase A (phospho-acceptor) domain KM417_23905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_23910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_23910 PF00512 His Kinase A (phospho-acceptor) domain KM417_23910 PF00989 PAS fold KM417_23910 PF08447 PAS fold KM417_23915 PF00561 alpha/beta hydrolase fold KM417_23915 PF08386 TAP-like protein KM417_23940 PF00005 ABC transporter KM417_23945 PF00528 Binding-protein-dependent transport system inner membrane component KM417_23970 PF00293 NUDIX domain KM417_23990 PF02664 S-Ribosylhomocysteinase (LuxS) KM417_23995 PF01809 Putative membrane protein insertion efficiency factor KM417_24000 PF00484 Carbonic anhydrase KM417_24005 PF01654 Cytochrome bd terminal oxidase subunit I KM417_24010 PF02322 Cytochrome bd terminal oxidase subunit II KM417_24015 PF10676 Spore germination protein gerPA/gerPF KM417_24030 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM417_24030 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM417_24055 PF04012 PspA/IM30 family KM417_24070 PF17910 FeoB cytosolic helical domain KM417_24070 PF02421 Ferrous iron transport protein B KM417_24070 PF07670 Nucleoside recognition KM417_24070 PF07664 Ferrous iron transport protein B C terminus KM417_24080 PF09515 Thiamine transporter protein (Thia_YuaJ) KM417_24085 PF00512 His Kinase A (phospho-acceptor) domain KM417_24085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_24085 PF00672 HAMP domain KM417_24090 PF00072 Response regulator receiver domain KM417_24090 PF00486 Transcriptional regulatory protein, C terminal KM417_24115 PF00156 Phosphoribosyl transferase domain KM417_24120 PF00781 Diacylglycerol kinase catalytic domain KM417_24140 PF00248 Aldo/keto reductase family KM417_24155 PF09335 SNARE associated Golgi protein KM417_24160 PF00398 Ribosomal RNA adenine dimethylase KM417_24165 PF02687 FtsX-like permease family KM417_24170 PF00005 ABC transporter KM417_24175 PF06445 GyrI-like small molecule binding domain KM417_24175 PF12833 Helix-turn-helix domain KM417_24180 PF00072 Response regulator receiver domain KM417_24180 PF00486 Transcriptional regulatory protein, C terminal KM417_24185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_24190 PF02687 FtsX-like permease family KM417_24200 PF02687 FtsX-like permease family KM417_24205 PF00005 ABC transporter KM417_24220 PF02447 GntP family permease KM417_24225 PF07702 UTRA domain KM417_24225 PF00392 Bacterial regulatory proteins, gntR family KM417_24235 PF07071 KDGP aldolase KM417_24240 PF03841 L-seryl-tRNA selenium transferase KM417_24245 PF01979 Amidohydrolase family KM417_24260 PF02557 D-alanyl-D-alanine carboxypeptidase KM417_24265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_24265 PF00512 His Kinase A (phospho-acceptor) domain KM417_24270 PF00486 Transcriptional regulatory protein, C terminal KM417_24270 PF00072 Response regulator receiver domain KM417_24275 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM417_24275 PF13378 Enolase C-terminal domain-like KM417_24280 PF13193 AMP-binding enzyme C-terminal domain KM417_24280 PF00501 AMP-binding enzyme KM417_24285 PF00378 Enoyl-CoA hydratase/isomerase KM417_24290 PF00561 alpha/beta hydrolase fold KM417_24295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM417_24295 PF16582 Middle domain of thiamine pyrophosphate KM417_24295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM417_24300 PF00425 chorismate binding enzyme KM417_24305 PF01040 UbiA prenyltransferase family KM417_24310 PF01258 Prokaryotic dksA/traR C4-type zinc finger KM417_24315 PF00313 'Cold-shock' DNA-binding domain KM417_24330 PF00343 Carbohydrate phosphorylase KM417_24335 PF08323 Starch synthase catalytic domain KM417_24335 PF00534 Glycosyl transferases group 1 KM417_24340 PF00483 Nucleotidyl transferase KM417_24345 PF00483 Nucleotidyl transferase KM417_24350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM417_24350 PF02806 Alpha amylase, C-terminal all-beta domain KM417_24350 PF00128 Alpha amylase, catalytic domain KM417_24365 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM417_24365 PF00056 lactate/malate dehydrogenase, NAD binding domain KM417_24460 PF05698 Bacterial trigger factor protein (TF) C-terminus KM417_24460 PF05697 Bacterial trigger factor protein (TF) KM417_24495 PF02308 MgtC family KM417_24500 PF02254 TrkA-N domain KM417_24500 PF07885 Ion channel KM417_24505 PF08868 YugN-like family KM417_24510 PF00342 Phosphoglucose isomerase KM417_24515 PF04070 Domain of unknown function (DUF378) KM417_24520 PF00575 S1 RNA binding domain KM417_24525 PF00155 Aminotransferase class I and II KM417_24530 PF01037 Lrp/AsnC ligand binding domain KM417_24535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM417_24535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM417_24540 PF00561 alpha/beta hydrolase fold KM417_24540 PF08386 TAP-like protein KM417_24550 PF00155 Aminotransferase class I and II KM417_24565 PF08810 Kinase associated protein B KM417_24570 PF00929 Exonuclease KM417_24575 PF03600 Citrate transporter KM417_24590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM417_24590 PF03129 Anticodon binding domain KM417_24595 PF03061 Thioesterase superfamily KM417_24605 PF02632 BioY family KM417_24615 PF00483 Nucleotidyl transferase KM417_24620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM417_24620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM417_24620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM417_24620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM417_24625 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM417_24625 PF10372 Bacterial membrane-spanning protein N-terminus KM417_24630 PF00883 Cytosol aminopeptidase family, catalytic domain KM417_24630 PF02789 Cytosol aminopeptidase family, N-terminal domain KM417_24635 PF06725 3D domain KM417_24645 PF00293 NUDIX domain KM417_24645 PF13344 Haloacid dehalogenase-like hydrolase KM417_24650 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_24655 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_24665 PF06445 GyrI-like small molecule binding domain KM417_24680 PF04463 Protein of unknown function (DUF523) KM417_24700 PF01521 Iron-sulphur cluster biosynthesis KM417_24705 PF01678 Diaminopimelate epimerase KM417_24710 PF07293 Protein of unknown function (DUF1450) KM417_24715 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_24725 PF00005 ABC transporter KM417_24725 PF09383 NIL domain KM417_24730 PF03649 Uncharacterised protein family (UPF0014) KM417_24735 PF08274 PhnA Zinc-Ribbon KM417_24735 PF03831 PhnA domain KM417_24770 PF01909 Nucleotidyltransferase domain KM417_24770 PF13427 Domain of unknown function (DUF4111) KM417_24775 PF07315 Protein of unknown function (DUF1462) KM417_24780 PF01106 NifU-like domain KM417_24795 PF04608 Phosphatidylglycerophosphatase A KM417_24805 PF02525 Flavodoxin-like fold KM417_24810 PF13344 Haloacid dehalogenase-like hydrolase KM417_24820 PF01934 Protein of unknown function DUF86 KM417_24825 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM417_24840 PF06265 Protein of unknown function (DUF1027) KM417_24845 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM417_24850 PF13411 MerR HTH family regulatory protein KM417_24850 PF07739 TipAS antibiotic-recognition domain KM417_24855 PF10086 YhfC intramembrane metalloprotease KM417_24875 PF04055 Radical SAM superfamily KM417_24875 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KM417_24880 PF01551 Peptidase family M23 KM417_24890 PF08827 Domain of unknown function (DUF1805) KM417_24895 PF02872 5'-nucleotidase, C-terminal domain KM417_24900 PF03551 Transcriptional regulator PadR-like family KM417_24905 PF04892 VanZ like family KM417_24910 PF01458 Uncharacterized protein family (UPF0051) KM417_24915 PF01592 NifU-like N terminal domain KM417_24920 PF00266 Aminotransferase class-V KM417_24925 PF01458 Uncharacterized protein family (UPF0051) KM417_24930 PF00005 ABC transporter KM417_24935 PF03180 NLPA lipoprotein KM417_24940 PF03180 NLPA lipoprotein KM417_24945 PF00528 Binding-protein-dependent transport system inner membrane component KM417_24950 PF00005 ABC transporter KM417_24950 PF09383 NIL domain KM417_24960 PF00085 Thioredoxin KM417_24965 PF01751 Toprim domain KM417_24970 PF01597 Glycine cleavage H-protein KM417_24975 PF03960 ArsC family KM417_25020 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM417_25020 PF00056 lactate/malate dehydrogenase, NAD binding domain KM417_25040 PF13305 Tetracyclin repressor-like, C-terminal domain KM417_25040 PF00440 Bacterial regulatory proteins, tetR family KM417_25045 PF00753 Metallo-beta-lactamase superfamily KM417_25050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM417_25050 PF02770 Acyl-CoA dehydrogenase, middle domain KM417_25050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM417_25055 PF00108 Thiolase, N-terminal domain KM417_25055 PF02803 Thiolase, C-terminal domain KM417_25060 PF00378 Enoyl-CoA hydratase/isomerase KM417_25060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM417_25060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM417_25065 PF14115 YuzL-like protein KM417_25070 PF00768 D-alanyl-D-alanine carboxypeptidase KM417_25070 PF07943 Penicillin-binding protein 5, C-terminal domain KM417_25075 PF01619 Proline dehydrogenase KM417_25080 PF10835 Protein of unknown function (DUF2573) KM417_25085 PF01910 Thiamine-binding protein KM417_25090 PF02743 Cache domain KM417_25090 PF00672 HAMP domain KM417_25090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM417_25110 PF07690 Major Facilitator Superfamily KM417_25115 PF13520 Amino acid permease KM417_25125 PF02096 60Kd inner membrane protein KM417_25135 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM417_25135 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM417_25170 PF09335 SNARE associated Golgi protein KM417_25180 PF17969 L,D-transpeptidase C-terminal domain KM417_25180 PF03734 L,D-transpeptidase catalytic domain KM417_25185 PF00072 Response regulator receiver domain KM417_25185 PF00486 Transcriptional regulatory protein, C terminal KM417_25190 PF00989 PAS fold KM417_25190 PF00512 His Kinase A (phospho-acceptor) domain KM417_25190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_25190 PF16736 Single Cache-like KM417_25200 PF09334 tRNA synthetases class I (M) KM417_25200 PF08264 Anticodon-binding domain of tRNA KM417_25210 PF00672 HAMP domain KM417_25210 PF02743 Cache domain KM417_25210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM417_25215 PF01883 Iron-sulfur cluster assembly protein KM417_25220 PF07504 Fungalysin/Thermolysin Propeptide Motif KM417_25220 PF03413 Peptidase propeptide and YPEB domain KM417_25220 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM417_25220 PF01447 Thermolysin metallopeptidase, catalytic domain KM417_25225 PF17954 Quercetinase C-terminal cupin domain KM417_25225 PF02678 Pirin KM417_25230 PF01047 MarR family KM417_25240 PF00999 Sodium/hydrogen exchanger family KM417_25245 PF02080 TrkA-C domain KM417_25250 PF01235 Sodium:alanine symporter family KM417_25255 PF00210 Ferritin-like domain KM417_25270 PF03641 Possible lysine decarboxylase KM417_25280 PF00210 Ferritin-like domain KM417_25290 PF01773 Na+ dependent nucleoside transporter N-terminus KM417_25290 PF07662 Na+ dependent nucleoside transporter C-terminus KM417_25295 PF07662 Na+ dependent nucleoside transporter C-terminus KM417_25295 PF01773 Na+ dependent nucleoside transporter N-terminus KM417_25300 PF01235 Sodium:alanine symporter family KM417_25305 PF01235 Sodium:alanine symporter family KM417_25310 PF13460 NAD(P)H-binding KM417_25325 PF00248 Aldo/keto reductase family KM417_25330 PF07690 Major Facilitator Superfamily KM417_25335 PF01638 HxlR-like helix-turn-helix KM417_25340 PF07849 Protein of unknown function (DUF1641) KM417_25345 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_25350 PF00579 tRNA synthetases class I (W and Y) KM417_25350 PF01479 S4 domain KM417_25355 PF01565 FAD binding domain KM417_25355 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM417_25365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM417_25365 PF00672 HAMP domain KM417_25365 PF17202 Single cache domain 3 KM417_25375 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM417_25380 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM417_25395 PF13302 Acetyltransferase (GNAT) domain KM417_25400 PF06146 Phosphate-starvation-inducible E KM417_25415 PF00005 ABC transporter KM417_25420 PF01032 FecCD transport family KM417_25425 PF01032 FecCD transport family KM417_25435 PF00072 Response regulator receiver domain KM417_25435 PF00486 Transcriptional regulatory protein, C terminal KM417_25445 PF01668 SmpB protein KM417_25450 PF08206 Ribonuclease B OB domain KM417_25450 PF00575 S1 RNA binding domain KM417_25450 PF00773 RNB domain KM417_25450 PF17876 Cold shock domain KM417_25455 PF12146 Serine aminopeptidase, S33 KM417_25460 PF03840 Preprotein translocase SecG subunit KM417_25465 PF04172 LrgB-like family KM417_25470 PF03788 LrgA family KM417_25475 PF01156 Inosine-uridine preferring nucleoside hydrolase KM417_25565 PF04860 Phage portal protein KM417_25590 PF02899 Phage integrase, N-terminal SAM-like domain KM417_25590 PF00589 Phage integrase family KM417_25595 PF00113 Enolase, C-terminal TIM barrel domain KM417_25595 PF03952 Enolase, N-terminal domain KM417_25600 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KM417_25600 PF01676 Metalloenzyme superfamily KM417_25605 PF00121 Triosephosphate isomerase KM417_25610 PF00162 Phosphoglycerate kinase KM417_25615 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM417_25615 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM417_25620 PF04198 Putative sugar-binding domain KM417_25630 PF04552 Sigma-54, DNA binding domain KM417_25630 PF00309 Sigma-54 factor, Activator interacting domain (AID) KM417_25630 PF04963 Sigma-54 factor, core binding domain KM417_25650 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM417_25655 PF07451 Stage V sporulation protein AD (SpoVAD) KM417_25660 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM417_25670 PF04239 Protein of unknown function (DUF421) KM417_25675 PF00574 Clp protease KM417_25680 PF00381 PTS HPr component phosphorylation site KM417_25685 PF14527 WhiA LAGLIDADG-like domain KM417_25685 PF10298 WhiA N-terminal LAGLIDADG-like domain KM417_25685 PF02650 WhiA C-terminal HTH domain KM417_25690 PF01933 Uncharacterised protein family UPF0052 KM417_25695 PF03668 P-loop ATPase protein family KM417_25700 PF00293 NUDIX domain KM417_25710 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM417_25720 PF14602 Hexapeptide repeat of succinyl-transferase KM417_25725 PF13419 Haloacid dehalogenase-like hydrolase KM417_25730 PF01790 Prolipoprotein diacylglyceryl transferase KM417_25735 PF02603 HPr Serine kinase N terminus KM417_25735 PF07475 HPr Serine kinase C-terminal domain KM417_25740 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KM417_25750 PF17760 UvrA interaction domain KM417_25750 PF17755 UvrA DNA-binding domain KM417_25750 PF00005 ABC transporter KM417_25755 PF12344 Ultra-violet resistance protein B KM417_25755 PF00271 Helicase conserved C-terminal domain KM417_25755 PF04851 Type III restriction enzyme, res subunit KM417_25755 PF17757 UvrB interaction domain KM417_25755 PF02151 UvrB/uvrC motif KM417_25760 PF12323 Helix-turn-helix domain KM417_25760 PF01385 Probable transposase KM417_25760 PF07282 Putative transposase DNA-binding domain KM417_25775 PF13411 MerR HTH family regulatory protein KM417_25775 PF07739 TipAS antibiotic-recognition domain KM417_25800 PF03601 Conserved hypothetical protein 698 KM417_25805 PF03466 LysR substrate binding domain KM417_25805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM417_25810 PF13411 MerR HTH family regulatory protein KM417_25815 PF03358 NADPH-dependent FMN reductase KM417_25820 PF12848 ABC transporter KM417_25820 PF00005 ABC transporter KM417_25830 PF00664 ABC transporter transmembrane region KM417_25830 PF00005 ABC transporter KM417_25835 PF17820 PDZ domain KM417_25840 PF17820 PDZ domain KM417_25840 PF03572 Peptidase family S41 KM417_25840 PF01471 Putative peptidoglycan binding domain KM417_25845 PF02687 FtsX-like permease family KM417_25845 PF18075 FtsX extracellular domain KM417_25850 PF00005 ABC transporter KM417_25855 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM417_25865 PF02810 SEC-C motif KM417_25865 PF01043 SecA preprotein cross-linking domain KM417_25865 PF07517 SecA DEAD-like domain KM417_25865 PF07516 SecA Wing and Scaffold domain KM417_25870 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KM417_25870 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KM417_25875 PF00313 'Cold-shock' DNA-binding domain KM417_25885 PF00271 Helicase conserved C-terminal domain KM417_25885 PF04851 Type III restriction enzyme, res subunit KM417_25890 PF00877 NlpC/P60 family KM417_25890 PF01476 LysM domain KM417_25895 PF01638 HxlR-like helix-turn-helix KM417_25900 PF02645 Uncharacterised protein, DegV family COG1307 KM417_25905 PF09186 Domain of unknown function (DUF1949) KM417_25905 PF01205 Uncharacterized protein family UPF0029 KM417_25910 PF03816 Cell envelope-related transcriptional attenuator domain KM417_25915 PF02350 UDP-N-acetylglucosamine 2-epimerase KM417_25920 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM417_25920 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM417_25920 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM417_25925 PF00953 Glycosyl transferase family 4 KM417_25930 PF01522 Polysaccharide deacetylase KM417_25935 PF00158 Sigma-54 interaction domain KM417_25935 PF03610 PTS system fructose IIA component KM417_25935 PF00874 PRD domain KM417_25945 PF02417 Chromate transporter KM417_25950 PF04794 YdjC-like protein KM417_25955 PF02056 Family 4 glycosyl hydrolase KM417_25955 PF11975 Family 4 glycosyl hydrolase C-terminal domain KM417_25960 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM417_25965 PF02378 Phosphotransferase system, EIIC KM417_25970 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM417_25980 PF02675 S-adenosylmethionine decarboxylase KM417_25985 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM417_25990 PF02378 Phosphotransferase system, EIIC KM417_25995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM417_26000 PF00375 Sodium:dicarboxylate symporter family KM417_26010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM417_26020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM417_26020 PF03466 LysR substrate binding domain KM417_26040 PF01654 Cytochrome bd terminal oxidase subunit I KM417_26045 PF02322 Cytochrome bd terminal oxidase subunit II KM417_26050 PF02040 Arsenical pump membrane protein KM417_26055 PF01964 Radical SAM ThiC family KM417_26055 PF13667 ThiC-associated domain KM417_26070 PF09988 Uncharacterized metal-binding protein (DUF2227) KM417_26080 PF00884 Sulfatase KM417_26085 PF01063 Amino-transferase class IV KM417_26095 PF07662 Na+ dependent nucleoside transporter C-terminus KM417_26095 PF01773 Na+ dependent nucleoside transporter N-terminus KM417_26110 PF02028 BCCT, betaine/carnitine/choline family transporter KM417_26115 PF06725 3D domain KM417_26115 PF01476 LysM domain KM417_26140 PF04434 SWIM zinc finger KM417_26145 PF00176 SNF2 family N-terminal domain KM417_26145 PF00271 Helicase conserved C-terminal domain KM417_26145 PF12419 SNF2 Helicase protein KM417_26175 PF04545 Sigma-70, region 4 KM417_26175 PF04542 Sigma-70 region 2 KM417_26180 PF04893 Yip1 domain KM417_26185 PF12704 MacB-like periplasmic core domain KM417_26185 PF02687 FtsX-like permease family KM417_26190 PF00005 ABC transporter KM417_26210 PF07690 Major Facilitator Superfamily KM417_26225 PF00512 His Kinase A (phospho-acceptor) domain KM417_26225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_26225 PF16736 Single Cache-like KM417_26225 PF00989 PAS fold KM417_26230 PF00486 Transcriptional regulatory protein, C terminal KM417_26230 PF00072 Response regulator receiver domain KM417_26235 PF16363 GDP-mannose 4,6 dehydratase KM417_26240 PF03816 Cell envelope-related transcriptional attenuator domain KM417_26245 PF07977 FabA-like domain KM417_26250 PF02350 UDP-N-acetylglucosamine 2-epimerase KM417_26255 PF08239 Bacterial SH3 domain KM417_26255 PF00005 ABC transporter KM417_26260 PF01061 ABC-2 type transporter KM417_26265 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM417_26265 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM417_26265 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM417_26310 PF12116 Stage III sporulation protein D KM417_26325 PF01551 Peptidase family M23 KM417_26335 PF00005 ABC transporter KM417_26345 PF08486 Stage II sporulation protein KM417_26350 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM417_26360 PF06612 Protein of unknown function (DUF1146) KM417_26365 PF00361 Proton-conducting membrane transporter KM417_26370 PF00361 Proton-conducting membrane transporter KM417_26375 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM417_26375 PF00361 Proton-conducting membrane transporter KM417_26375 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus KM417_26380 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KM417_26385 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KM417_26395 PF00146 NADH dehydrogenase KM417_26400 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KM417_26405 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KM417_26410 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KM417_26415 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KM417_26420 PF03707 Bacterial signalling protein N terminal repeat KM417_26420 PF00563 EAL domain KM417_26420 PF00990 Diguanylate cyclase, GGDEF domain KM417_26435 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KM417_26435 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KM417_26440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM417_26440 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM417_26445 PF00231 ATP synthase KM417_26450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM417_26450 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM417_26450 PF00306 ATP synthase alpha/beta chain, C terminal domain KM417_26455 PF00213 ATP synthase delta (OSCP) subunit KM417_26460 PF00430 ATP synthase B/B' CF(0) KM417_26465 PF00137 ATP synthase subunit C KM417_26470 PF00119 ATP synthase A chain KM417_26475 PF03899 ATP synthase I chain KM417_26495 PF00464 Serine hydroxymethyltransferase KM417_26500 PF04260 Protein of unknown function (DUF436) KM417_26505 PF02502 Ribose/Galactose Isomerase KM417_26510 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM417_26515 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM417_26520 PF07681 DoxX KM417_26525 PF01613 Flavin reductase like domain KM417_26535 PF02659 Putative manganese efflux pump KM417_26540 PF03481 Putative GTP-binding controlling metal-binding KM417_26540 PF01300 Telomere recombination KM417_26550 PF09551 Stage II sporulation protein R (spore_II_R) KM417_26555 PF13847 Methyltransferase domain KM417_26555 PF17827 PrmC N-terminal domain KM417_26560 PF00472 RF-1 domain KM417_26560 PF03462 PCRF domain KM417_26565 PF00265 Thymidine kinase KM417_26570 PF01197 Ribosomal protein L31 KM417_26575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM417_26575 PF07498 Rho termination factor, N-terminal domain KM417_26575 PF07497 Rho termination factor, RNA-binding domain KM417_26580 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM417_26585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM417_26590 PF01116 Fructose-bisphosphate aldolase class-II KM417_26595 PF00072 Response regulator receiver domain KM417_26600 PF10740 Domain of unknown function (DUF2529) KM417_26605 PF00117 Glutamine amidotransferase class-I KM417_26605 PF06418 CTP synthase N-terminus KM417_26610 PF05066 HB1, ASXL, restriction endonuclease HTH domain KM417_26620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM417_26620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM417_26620 PF02770 Acyl-CoA dehydrogenase, middle domain KM417_26625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM417_26625 PF02770 Acyl-CoA dehydrogenase, middle domain KM417_26625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM417_26630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM417_26630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM417_26635 PF02803 Thiolase, C-terminal domain KM417_26635 PF00108 Thiolase, N-terminal domain KM417_26640 PF02754 Cysteine-rich domain KM417_26640 PF13183 4Fe-4S dicluster domain KM417_26645 PF13091 PLD-like domain KM417_26650 PF03851 UV-endonuclease UvdE KM417_26655 PF00563 EAL domain KM417_26655 PF03707 Bacterial signalling protein N terminal repeat KM417_26655 PF00990 Diguanylate cyclase, GGDEF domain KM417_26675 PF00072 Response regulator receiver domain KM417_26675 PF00196 Bacterial regulatory proteins, luxR family KM417_26680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_26680 PF07730 Histidine kinase KM417_26690 PF00005 ABC transporter KM417_26695 PF00557 Metallopeptidase family M24 KM417_26705 PF02225 PA domain KM417_26705 PF04389 Peptidase family M28 KM417_26725 PF04542 Sigma-70 region 2 KM417_26725 PF08281 Sigma-70, region 4 KM417_26730 PF03485 Arginyl tRNA synthetase N terminal domain KM417_26730 PF00750 tRNA synthetases class I (R) KM417_26730 PF05746 DALR anticodon binding domain KM417_26735 PF09148 Domain of unknown function (DUF1934) KM417_26740 PF02016 LD-carboxypeptidase N-terminal domain KM417_26740 PF17676 LD-carboxypeptidase C-terminal domain KM417_26755 PF00491 Arginase family KM417_26760 PF17284 Spermidine synthase tetramerisation domain KM417_26765 PF07690 Major Facilitator Superfamily KM417_26770 PF13411 MerR HTH family regulatory protein KM417_26775 PF03009 Glycerophosphoryl diester phosphodiesterase family KM417_26780 PF00912 Transglycosylase KM417_26780 PF00905 Penicillin binding protein transpeptidase domain KM417_26785 PF08741 YwhD family KM417_26790 PF02163 Peptidase family M50 KM417_26795 PF01361 Tautomerase enzyme KM417_26800 PF01966 HD domain KM417_26805 PF01497 Periplasmic binding protein KM417_26810 PF00005 ABC transporter KM417_26815 PF01032 FecCD transport family KM417_26825 PF07293 Protein of unknown function (DUF1450) KM417_26840 PF03099 Biotin/lipoate A/B protein ligase family KM417_26845 PF01515 Phosphate acetyl/butaryl transferase KM417_26850 PF06778 Chlorite dismutase KM417_26855 PF07943 Penicillin-binding protein 5, C-terminal domain KM417_26855 PF00768 D-alanyl-D-alanine carboxypeptidase KM417_26860 PF07486 Cell Wall Hydrolase KM417_26865 PF09671 Spore coat protein (Spore_GerQ) KM417_26870 PF04241 Protein of unknown function (DUF423) KM417_26880 PF07885 Ion channel KM417_26880 PF02254 TrkA-N domain KM417_26885 PF00860 Permease family KM417_26895 PF12823 Domain of unknown function (DUF3817) KM417_26900 PF03167 Uracil DNA glycosylase superfamily KM417_26905 PF12679 ABC-2 family transporter protein KM417_26910 PF00005 ABC transporter KM417_26915 PF13472 GDSL-like Lipase/Acylhydrolase family KM417_26920 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM417_26920 PF00356 Bacterial regulatory proteins, lacI family KM417_26930 PF03447 Homoserine dehydrogenase, NAD binding domain KM417_26930 PF00742 Homoserine dehydrogenase KM417_26930 PF01842 ACT domain KM417_26935 PF04204 Homoserine O-succinyltransferase KM417_26940 PF01053 Cys/Met metabolism PLP-dependent enzyme KM417_26950 PF13419 Haloacid dehalogenase-like hydrolase KM417_26955 PF00027 Cyclic nucleotide-binding domain KM417_26960 PF02525 Flavodoxin-like fold KM417_26965 PF00072 Response regulator receiver domain KM417_26965 PF00196 Bacterial regulatory proteins, luxR family KM417_26975 PF08543 Phosphomethylpyrimidine kinase KM417_26980 PF07694 5TMR of 5TMR-LYT KM417_26980 PF00990 Diguanylate cyclase, GGDEF domain KM417_26985 PF04328 Selenoprotein, putative KM417_26990 PF02554 Carbon starvation protein CstA KM417_26990 PF13722 5TM C-terminal transporter carbon starvation CstA KM417_26995 PF00072 Response regulator receiver domain KM417_26995 PF04397 LytTr DNA-binding domain KM417_27000 PF07690 Major Facilitator Superfamily KM417_27005 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM417_27020 PF03458 UPF0126 domain KM417_27025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM417_27035 PF03061 Thioesterase superfamily KM417_27045 PF00535 Glycosyl transferase family 2 KM417_27050 PF12848 ABC transporter KM417_27050 PF00005 ABC transporter KM417_27070 PF00535 Glycosyl transferase family 2 KM417_27075 PF00440 Bacterial regulatory proteins, tetR family KM417_27080 PF00873 AcrB/AcrD/AcrF family KM417_27085 PF01625 Peptide methionine sulfoxide reductase KM417_27085 PF01641 SelR domain KM417_27090 PF01594 AI-2E family transporter KM417_27095 PF04172 LrgB-like family KM417_27100 PF03788 LrgA family KM417_27105 PF00072 Response regulator receiver domain KM417_27105 PF04397 LytTr DNA-binding domain KM417_27110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_27110 PF13492 GAF domain KM417_27110 PF07694 5TMR of 5TMR-LYT KM417_27110 PF06580 Histidine kinase KM417_27115 PF07690 Major Facilitator Superfamily KM417_27120 PF02028 BCCT, betaine/carnitine/choline family transporter KM417_27125 PF02898 Nitric oxide synthase, oxygenase domain KM417_27130 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM417_27130 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM417_27140 PF02293 AmiS/UreI family transporter KM417_27150 PF16363 GDP-mannose 4,6 dehydratase KM417_27155 PF03006 Haemolysin-III related KM417_27165 PF03880 DbpA RNA binding domain KM417_27165 PF00271 Helicase conserved C-terminal domain KM417_27165 PF00270 DEAD/DEAH box helicase KM417_27175 PF00478 IMP dehydrogenase / GMP reductase domain KM417_27180 PF08439 Oligopeptidase F KM417_27180 PF01432 Peptidase family M3 KM417_27190 PF02590 Predicted SPOUT methyltransferase KM417_27200 PF13180 PDZ domain KM417_27205 PF00753 Metallo-beta-lactamase superfamily KM417_27210 PF09648 YycH protein KM417_27215 PF07435 YycH protein KM417_27220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM417_27220 PF00672 HAMP domain KM417_27220 PF00512 His Kinase A (phospho-acceptor) domain KM417_27220 PF13426 PAS domain KM417_27225 PF00072 Response regulator receiver domain KM417_27225 PF00486 Transcriptional regulatory protein, C terminal KM417_27250 PF00709 Adenylosuccinate synthetase KM417_27255 PF00772 DnaB-like helicase N terminal domain KM417_27255 PF03796 DnaB-like helicase C terminal domain KM417_27260 PF03948 Ribosomal protein L9, C-terminal domain KM417_27260 PF01281 Ribosomal protein L9, N-terminal domain KM417_27265 PF01368 DHH family KM417_27265 PF02272 DHHA1 domain KM417_27270 PF09991 Predicted membrane protein (DUF2232) KM417_27275 PF01084 Ribosomal protein S18 KM417_27280 PF00436 Single-strand binding protein family KM417_27285 PF01250 Ribosomal protein S6 KM417_27290 PF01926 50S ribosome-binding GTPase KM417_27290 PF06071 Protein of unknown function (DUF933) KM417_27295 PF06107 Bacterial protein of unknown function (DUF951) KM417_27300 PF00924 Mechanosensitive ion channel KM417_27305 PF06866 Protein of unknown function (DUF1256) KM417_27310 PF17762 HTH domain found in ParB protein KM417_27310 PF02195 ParB-like nuclease domain KM417_27315 PF13614 AAA domain KM417_27320 PF02195 ParB-like nuclease domain KM417_27320 PF17762 HTH domain found in ParB protein KM417_27325 PF02527 rRNA small subunit methyltransferase G KM417_27330 PF13932 GidA associated domain KM417_27330 PF01134 Glucose inhibited division protein A KM417_27335 PF12631 MnmE helical domain KM417_27335 PF01926 50S ribosome-binding GTPase KM417_27335 PF10396 GTP-binding protein TrmE N-terminus KM417_27340 PF01424 R3H domain KM417_27340 PF14804 Jag N-terminus KM417_27345 PF02096 60Kd inner membrane protein KM417_27350 PF00825 Ribonuclease P KM417_27355 PF00468 Ribosomal protein L34 KM417_27365 PF08378 Nuclease-related domain KM417_27405 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM417_27485 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM417_27530 PF13427 Domain of unknown function (DUF4111) KM417_27530 PF18765 Polymerase beta, Nucleotidyltransferase KM417_27555 PF01609 Transposase DDE domain KM417_27560 PF01609 Transposase DDE domain KM417_27585 PF01580 FtsK/SpoIIIE family KM417_27585 PF09397 Ftsk gamma domain KM417_27585 PF17854 FtsK alpha domain KM417_27585 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KM417_27600 PF00091 Tubulin/FtsZ family, GTPase domain KM417_27675 PF00437 Type II/IV secretion system protein KM417_27795 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) KM417_27810 PF04235 Protein of unknown function (DUF418) KM417_27830 PF00395 S-layer homology domain KM417_27835 PF01569 PAP2 superfamily KM417_27850 PF00535 Glycosyl transferase family 2 KM417_27855 PF00483 Nucleotidyl transferase KM417_27860 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM417_27860 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM417_27860 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM417_27900 PF03497 Anthrax toxin LF subunit KM417_27900 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM417_27920 PF00874 PRD domain KM417_27920 PF05043 Mga helix-turn-helix domain KM417_27920 PF08279 HTH domain KM417_27925 PF09385 Histidine kinase N terminal KM417_27940 PF13700 Domain of unknown function (DUF4158) KM417_27940 PF01526 Tn3 transposase DDE domain KM417_27945 PF00239 Resolvase, N terminal domain KM417_27945 PF02796 Helix-turn-helix domain of resolvase KM417_27950 PF03845 Spore germination protein KM417_27955 PF03323 Bacillus/Clostridium GerA spore germination protein KM417_27960 PF05504 Spore germination B3/ GerAC like, C-terminal KM417_27970 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 KM417_27970 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain KM417_27970 PF07691 PA14 domain KM417_27970 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 KM417_27975 PF01022 Bacterial regulatory protein, arsR family KM417_28000 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM417_28000 PF09156 Anthrax toxin lethal factor, middle domain KM417_28020 PF18277 AbrB C-terminal domain KM417_28020 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM417_28030 PF00589 Phage integrase family KM417_28030 PF02899 Phage integrase, N-terminal SAM-like domain KM417_28060 PF14436 Bacterial EndoU nuclease KM417_28060 PF04740 LXG domain of WXG superfamily KM417_28085 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM417_28095 PF00589 Phage integrase family KM417_28120 PF18801 response regulator aspartate phosphatase H, N terminal KM417_28130 PF17209 Hfq protein KM417_28135 PF01022 Bacterial regulatory protein, arsR family KM417_28140 PF02600 Disulfide bond formation protein DsbB KM417_28155 PF00565 Staphylococcal nuclease homologue KM417_28160 PF13342 C-terminal repeat of topoisomerase KM417_28160 PF01751 Toprim domain KM417_28160 PF01131 DNA topoisomerase KM417_28170 PF08708 Primase C terminal 1 (PriCT-1) KM417_28190 PF17362 Family of unknown function KM417_28205 PF17631 Family of unknown function (DUF5512) KM417_28245 PF00437 Type II/IV secretion system protein KM417_28275 PF04956 TrbC/VIRB2 family KM417_28290 PF12696 TraM recognition site of TraD and TraG KM417_28325 PF00877 NlpC/P60 family KM417_28335 PF17632 Family of unknown function (DUF5513) KM417_28360 PF17633 Family of unknown function (DUF5514) KM417_28365 PF17630 Family of unknown function (DUF5511) KM417_28370 PF18840 Large polyvalent protein associated domain 25 KM417_28385 PF13154 Protein of unknown function (DUF3991) KM417_28390 PF01131 DNA topoisomerase KM417_28390 PF01751 Toprim domain KM417_28430 PF17443 Uncharacterized protein pXO2-72 KM417_28450 PF00817 impB/mucB/samB family KM417_28450 PF11798 IMS family HHH motif KM417_28450 PF11799 impB/mucB/samB family C-terminal domain KM417_28455 PF13152 Protein of unknown function (DUF3967) KM417_28455 PF13411 MerR HTH family regulatory protein KM417_28460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM417_28490 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM417_28490 PF05043 Mga helix-turn-helix domain KM417_28490 PF00874 PRD domain KM417_28500 PF01810 LysE type translocator KM417_28510 PF08279 HTH domain KM417_28510 PF05043 Mga helix-turn-helix domain KM417_28510 PF00874 PRD domain KM417_28515 PF09385 Histidine kinase N terminal KM417_28525 PF10502 Signal peptidase, peptidase S26 KM417_28540 PF01022 Bacterial regulatory protein, arsR family KM417_28550 PF08245 Mur ligase middle domain KM417_28555 PF14102 Capsule biosynthesis CapC KM417_28560 PF09587 Bacterial capsule synthesis protein PGA_cap KM417_28580 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM417_28580 PF05043 Mga helix-turn-helix domain KM417_28590 PF01569 PAP2 superfamily KM417_28600 PF00440 Bacterial regulatory proteins, tetR family KM417_28605 PF04463 Protein of unknown function (DUF523) KM417_28610 PF02517 CPBP intramembrane metalloprotease KM417_28615 PF01906 Putative heavy-metal-binding KM417_28630 PF00395 S-layer homology domain KM417_28630 PF01520 N-acetylmuramoyl-L-alanine amidase KM417_28645 PF13614 AAA domain