locus-tag class description KM408_00005 PF00308 Bacterial dnaA protein KM408_00005 PF08299 Bacterial dnaA protein helix-turn-helix KM408_00005 PF11638 DnaA N-terminal domain KM408_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KM408_00010 PF02767 DNA polymerase III beta subunit, central domain KM408_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KM408_00020 PF02463 RecF/RecN/SMC N terminal domain KM408_00025 PF01751 Toprim domain KM408_00025 PF00204 DNA gyrase B KM408_00025 PF00986 DNA gyrase B subunit, carboxyl terminus KM408_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller KM408_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A KM408_00060 PF14175 YaaC-like Protein KM408_00065 PF00478 IMP dehydrogenase / GMP reductase domain KM408_00065 PF00571 CBS domain KM408_00070 PF00768 D-alanyl-D-alanine carboxypeptidase KM408_00070 PF07943 Penicillin-binding protein 5, C-terminal domain KM408_00075 PF01680 SOR/SNZ family KM408_00080 PF01174 SNO glutamine amidotransferase family KM408_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM408_00085 PF02403 Seryl-tRNA synthetase N-terminal domain KM408_00100 PF01712 Deoxynucleoside kinase KM408_00105 PF01712 Deoxynucleoside kinase KM408_00110 PF00857 Isochorismatase family KM408_00115 PF14437 MafB19-like deaminase KM408_00125 PF12169 DNA polymerase III subunits gamma and tau domain III KM408_00130 PF02575 YbaB/EbfC DNA-binding family KM408_00135 PF13662 Toprim domain KM408_00135 PF02132 RecR protein KM408_00140 PF10704 Protein of unknown function (DUF2508) KM408_00145 PF07441 SigmaK-factor processing regulatory protein BofA KM408_00180 PF01276 Orn/Lys/Arg decarboxylase, major domain KM408_00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM408_00185 PF02223 Thymidylate kinase KM408_00190 PF09115 DNA polymerase III, delta subunit, C terminal KM408_00195 PF04468 PSP1 C-terminal conserved region KM408_00200 PF06156 Initiation control protein YabA KM408_00205 PF05175 Methyltransferase small domain KM408_00210 PF01541 GIY-YIG catalytic domain KM408_00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM408_00220 PF18277 AbrB C-terminal domain KM408_00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM408_00225 PF08264 Anticodon-binding domain of tRNA KM408_00225 PF09334 tRNA synthetases class I (M) KM408_00225 PF01588 Putative tRNA binding domain KM408_00230 PF01026 TatD related DNase KM408_00235 PF13331 Domain of unknown function (DUF4093) KM408_00235 PF13662 Toprim domain KM408_00240 PF00398 Ribosomal RNA adenine dimethylase KM408_00245 PF05582 YabG peptidase U57 KM408_00250 PF06257 Biofilm formation stimulator VEG KM408_00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM408_00260 PF00288 GHMP kinases N terminal domain KM408_00260 PF08544 GHMP kinases C terminal KM408_00265 PF09182 Bacterial purine repressor, N-terminal KM408_00265 PF00156 Phosphoribosyl transferase domain KM408_00270 PF01042 Endoribonuclease L-PSP KM408_00275 PF04026 SpoVG KM408_00280 PF00483 Nucleotidyl transferase KM408_00280 PF00132 Bacterial transferase hexapeptide (six repeats) KM408_00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KM408_00285 PF14572 Phosphoribosyl synthetase-associated domain KM408_00290 PF01195 Peptidyl-tRNA hydrolase KM408_00300 PF02559 CarD-like/TRCF domain KM408_00300 PF00270 DEAD/DEAH box helicase KM408_00300 PF03461 TRCF domain KM408_00300 PF17757 UvrB interaction domain KM408_00300 PF00271 Helicase conserved C-terminal domain KM408_00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM408_00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor KM408_00310 PF01943 Polysaccharide biosynthesis protein KM408_00310 PF14667 Polysaccharide biosynthesis C-terminal domain KM408_00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM408_00315 PF03819 MazG nucleotide pyrophosphohydrolase domain KM408_00320 PF01479 S4 domain KM408_00325 PF07873 YabP family KM408_00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) KM408_00340 PF00575 S1 RNA binding domain KM408_00355 PF07228 Stage II sporulation protein E (SpoIIE) KM408_00360 PF09179 TilS substrate binding domain KM408_00360 PF01171 PP-loop family KM408_00360 PF11734 TilS substrate C-terminal domain KM408_00365 PF00156 Phosphoribosyl transferase domain KM408_00370 PF17862 AAA+ lid domain KM408_00370 PF00004 ATPase family associated with various cellular activities (AAA) KM408_00370 PF01434 Peptidase family M41 KM408_00370 PF06480 FtsH Extracellular KM408_00375 PF03309 Type III pantothenate kinase KM408_00380 PF01430 Hsp33 protein KM408_00385 PF00291 Pyridoxal-phosphate dependent enzyme KM408_00390 PF04715 Anthranilate synthase component I, N terminal region KM408_00390 PF00425 chorismate binding enzyme KM408_00395 PF00117 Glutamine amidotransferase class-I KM408_00400 PF01063 Amino-transferase class IV KM408_00405 PF00809 Pterin binding enzyme KM408_00410 PF02152 Dihydroneopterin aldolase KM408_00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KM408_00420 PF01381 Helix-turn-helix KM408_00425 PF01207 Dihydrouridine synthase (Dus) KM408_00430 PF01336 OB-fold nucleic acid binding domain KM408_00430 PF00152 tRNA synthetases class II (D, K and N) KM408_00450 PF17727 CtsR C-terminal dimerization domain KM408_00450 PF05848 CtsR N-terminal HTH domain KM408_00455 PF02151 UvrB/uvrC motif KM408_00460 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KM408_00465 PF00004 ATPase family associated with various cellular activities (AAA) KM408_00465 PF17871 AAA lid domain KM408_00465 PF07724 AAA domain (Cdc48 subfamily) KM408_00465 PF02861 Clp amino terminal domain, pathogenicity island component KM408_00465 PF10431 C-terminal, D2-small domain, of ClpB protein KM408_00470 PF18073 Rubredoxin metal binding domain KM408_00475 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM408_00475 PF10635 DisA bacterial checkpoint controller linker region KM408_00485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KM408_00490 PF02542 YgbB family KM408_00495 PF00749 tRNA synthetases class I (E and Q), catalytic domain KM408_00500 PF06426 Serine acetyltransferase, N-terminal KM408_00500 PF00132 Bacterial transferase hexapeptide (six repeats) KM408_00505 PF01406 tRNA synthetases class I (C) catalytic domain KM408_00505 PF09190 DALR domain KM408_00510 PF00636 Ribonuclease III domain KM408_00515 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM408_00515 PF00588 SpoU rRNA Methylase family KM408_00520 PF05991 YacP-like NYN domain KM408_00525 PF08281 Sigma-70, region 4 KM408_00525 PF04542 Sigma-70 region 2 KM408_00530 PF00471 Ribosomal protein L33 KM408_00535 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KM408_00540 PF00467 KOW motif KM408_00540 PF02357 Transcription termination factor nusG KM408_00545 PF03946 Ribosomal protein L11, N-terminal domain KM408_00545 PF00298 Ribosomal protein L11, RNA binding domain KM408_00550 PF00687 Ribosomal protein L1p/L10e family KM408_00555 PF00466 Ribosomal protein L10 KM408_00560 PF00542 Ribosomal protein L7/L12 C-terminal domain KM408_00560 PF16320 Ribosomal protein L7/L12 dimerisation domain KM408_00565 PF05175 Methyltransferase small domain KM408_00570 PF04561 RNA polymerase Rpb2, domain 2 KM408_00570 PF04565 RNA polymerase Rpb2, domain 3 KM408_00570 PF10385 RNA polymerase beta subunit external 1 domain KM408_00570 PF00562 RNA polymerase Rpb2, domain 6 KM408_00570 PF04560 RNA polymerase Rpb2, domain 7 KM408_00570 PF04563 RNA polymerase beta subunit KM408_00575 PF04997 RNA polymerase Rpb1, domain 1 KM408_00575 PF04998 RNA polymerase Rpb1, domain 5 KM408_00575 PF05000 RNA polymerase Rpb1, domain 4 KM408_00575 PF04983 RNA polymerase Rpb1, domain 3 KM408_00575 PF00623 RNA polymerase Rpb1, domain 2 KM408_00580 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM408_00585 PF00164 Ribosomal protein S12/S23 KM408_00590 PF00177 Ribosomal protein S7p/S5e KM408_00595 PF14492 Elongation Factor G, domain II KM408_00595 PF00679 Elongation factor G C-terminus KM408_00595 PF03764 Elongation factor G, domain IV KM408_00595 PF03144 Elongation factor Tu domain 2 KM408_00595 PF00009 Elongation factor Tu GTP binding domain KM408_00600 PF03143 Elongation factor Tu C-terminal domain KM408_00600 PF03144 Elongation factor Tu domain 2 KM408_00600 PF00009 Elongation factor Tu GTP binding domain KM408_00605 PF00338 Ribosomal protein S10p/S20e KM408_00610 PF00297 Ribosomal protein L3 KM408_00615 PF00573 Ribosomal protein L4/L1 family KM408_00620 PF00276 Ribosomal protein L23 KM408_00625 PF00181 Ribosomal Proteins L2, RNA binding domain KM408_00625 PF03947 Ribosomal Proteins L2, C-terminal domain KM408_00630 PF00203 Ribosomal protein S19 KM408_00635 PF00237 Ribosomal protein L22p/L17e KM408_00640 PF07650 KH domain KM408_00640 PF00189 Ribosomal protein S3, C-terminal domain KM408_00645 PF00252 Ribosomal protein L16p/L10e KM408_00650 PF00831 Ribosomal L29 protein KM408_00655 PF00366 Ribosomal protein S17 KM408_00660 PF00238 Ribosomal protein L14p/L23e KM408_00665 PF00467 KOW motif KM408_00665 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KM408_00670 PF00281 Ribosomal protein L5 KM408_00670 PF00673 ribosomal L5P family C-terminus KM408_00675 PF00253 Ribosomal protein S14p/S29e KM408_00680 PF00410 Ribosomal protein S8 KM408_00685 PF00347 Ribosomal protein L6 KM408_00690 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KM408_00695 PF03719 Ribosomal protein S5, C-terminal domain KM408_00695 PF00333 Ribosomal protein S5, N-terminal domain KM408_00700 PF00327 Ribosomal protein L30p/L7e KM408_00705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KM408_00710 PF00344 SecY translocase KM408_00715 PF05191 Adenylate kinase, active site lid KM408_00720 PF00557 Metallopeptidase family M24 KM408_00725 PF01176 Translation initiation factor 1A / IF-1 KM408_00730 PF00444 Ribosomal protein L36 KM408_00735 PF00416 Ribosomal protein S13/S18 KM408_00740 PF00411 Ribosomal protein S11 KM408_00745 PF01000 RNA polymerase Rpb3/RpoA insert domain KM408_00745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KM408_00745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KM408_00750 PF01196 Ribosomal protein L17 KM408_00755 PF00005 ABC transporter KM408_00760 PF00005 ABC transporter KM408_00765 PF02361 Cobalt transport protein KM408_00770 PF01416 tRNA pseudouridine synthase KM408_00775 PF00572 Ribosomal protein L13 KM408_00780 PF00380 Ribosomal protein S9/S16 KM408_00790 PF01520 N-acetylmuramoyl-L-alanine amidase KM408_00795 PF10609 NUBPL iron-transfer P-loop NTPase KM408_00800 PF17898 Spore germination GerD central core domain KM408_00805 PF14089 KinB-signalling pathway activation in sporulation KM408_00810 PF01522 Polysaccharide deacetylase KM408_00885 PF00491 Arginase family KM408_00890 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM408_00895 PF07949 YbbR-like protein KM408_00900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM408_00900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM408_00900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM408_00900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM408_00910 PF01380 SIS domain KM408_00915 PF00561 alpha/beta hydrolase fold KM408_00920 PF00392 Bacterial regulatory proteins, gntR family KM408_00920 PF07729 FCD domain KM408_00930 PF02447 GntP family permease KM408_00935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM408_00935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM408_00940 PF00326 Prolyl oligopeptidase family KM408_00940 PF07676 WD40-like Beta Propeller Repeat KM408_00975 PF00528 Binding-protein-dependent transport system inner membrane component KM408_00980 PF00005 ABC transporter KM408_00980 PF09383 NIL domain KM408_00985 PF03180 NLPA lipoprotein KM408_00990 PF00107 Zinc-binding dehydrogenase KM408_00990 PF08240 Alcohol dehydrogenase GroES-like domain KM408_01000 PF01565 FAD binding domain KM408_01005 PF07690 Major Facilitator Superfamily KM408_01015 PF07690 Major Facilitator Superfamily KM408_01030 PF00528 Binding-protein-dependent transport system inner membrane component KM408_01035 PF12911 N-terminal TM domain of oligopeptide transport permease C KM408_01035 PF00528 Binding-protein-dependent transport system inner membrane component KM408_01040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM408_01040 PF00005 ABC transporter KM408_01045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM408_01045 PF00005 ABC transporter KM408_01050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_01060 PF12833 Helix-turn-helix domain KM408_01075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_01080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_01085 PF00248 Aldo/keto reductase family KM408_01090 PF03807 NADP oxidoreductase coenzyme F420-dependent KM408_01090 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM408_01095 PF04973 Nicotinamide mononucleotide transporter KM408_01100 PF06800 Sugar transport protein KM408_01105 PF00528 Binding-protein-dependent transport system inner membrane component KM408_01115 PF12727 PBP superfamily domain KM408_01115 PF12728 Helix-turn-helix domain KM408_01125 PF03466 LysR substrate binding domain KM408_01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM408_01130 PF00892 EamA-like transporter family KM408_01135 PF14142 YrzO-like protein KM408_01145 PF01553 Acyltransferase KM408_01155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM408_01155 PF00356 Bacterial regulatory proteins, lacI family KM408_01165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM408_01165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM408_01175 PF01026 TatD related DNase KM408_01180 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KM408_01205 PF12848 ABC transporter KM408_01205 PF16326 ABC transporter C-terminal domain KM408_01205 PF00005 ABC transporter KM408_01220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_01225 PF00528 Binding-protein-dependent transport system inner membrane component KM408_01230 PF12911 N-terminal TM domain of oligopeptide transport permease C KM408_01230 PF00528 Binding-protein-dependent transport system inner membrane component KM408_01235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM408_01235 PF00005 ABC transporter KM408_01240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM408_01240 PF00005 ABC transporter KM408_01275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM408_01280 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM408_01290 PF07690 Major Facilitator Superfamily KM408_01300 PF01225 Mur ligase family, catalytic domain KM408_01300 PF02875 Mur ligase family, glutamate ligase domain KM408_01300 PF08245 Mur ligase middle domain KM408_01305 PF00270 DEAD/DEAH box helicase KM408_01305 PF00271 Helicase conserved C-terminal domain KM408_01310 PF03851 UV-endonuclease UvdE KM408_01315 PF01694 Rhomboid family KM408_01320 PF01648 4'-phosphopantetheinyl transferase superfamily KM408_01330 PF00842 Alanine racemase, C-terminal domain KM408_01330 PF01168 Alanine racemase, N-terminal domain KM408_01335 PF01402 Ribbon-helix-helix protein, copG family KM408_01340 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KM408_01345 PF17674 HHH domain KM408_01345 PF00575 S1 RNA binding domain KM408_01345 PF09371 Tex-like protein N-terminal domain KM408_01345 PF16921 Tex protein YqgF-like domain KM408_01355 PF10263 SprT-like family KM408_01355 PF17283 SprT-like zinc ribbon domain KM408_01440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KM408_01445 PF00814 Glycoprotease family KM408_01450 PF00583 Acetyltransferase (GNAT) family KM408_01455 PF00814 Glycoprotease family KM408_01460 PF12848 ABC transporter KM408_01460 PF00005 ABC transporter KM408_01460 PF16326 ABC transporter C-terminal domain KM408_01465 PF02629 CoA binding domain KM408_01465 PF06971 Putative DNA-binding protein N-terminus KM408_01475 PF02517 CPBP intramembrane metalloprotease KM408_01480 PF00166 Chaperonin 10 Kd subunit KM408_01485 PF00118 TCP-1/cpn60 chaperonin family KM408_01490 PF02540 NAD synthase KM408_01490 PF00958 GMP synthase C terminal domain KM408_01490 PF00117 Glutamine amidotransferase class-I KM408_01495 PF00860 Permease family KM408_01500 PF00072 Response regulator receiver domain KM408_01500 PF00486 Transcriptional regulatory protein, C terminal KM408_01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_01505 PF00512 His Kinase A (phospho-acceptor) domain KM408_01505 PF00989 PAS fold KM408_01505 PF16736 Single Cache-like KM408_01535 PF08241 Methyltransferase domain KM408_01575 PF02673 Bacitracin resistance protein BacA KM408_01585 PF00005 ABC transporter KM408_01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_01590 PF00512 His Kinase A (phospho-acceptor) domain KM408_01595 PF00072 Response regulator receiver domain KM408_01595 PF00486 Transcriptional regulatory protein, C terminal KM408_01615 PF00731 AIR carboxylase KM408_01620 PF02222 ATP-grasp domain KM408_01620 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KM408_01625 PF00206 Lyase KM408_01625 PF10397 Adenylosuccinate lyase C-terminus KM408_01630 PF01259 SAICAR synthetase KM408_01635 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KM408_01645 PF00586 AIR synthase related protein, N-terminal domain KM408_01645 PF02769 AIR synthase related protein, C-terminal domain KM408_01645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KM408_01650 PF00156 Phosphoribosyl transferase domain KM408_01655 PF00586 AIR synthase related protein, N-terminal domain KM408_01655 PF02769 AIR synthase related protein, C-terminal domain KM408_01660 PF00551 Formyl transferase KM408_01665 PF02142 MGS-like domain KM408_01665 PF01808 AICARFT/IMPCHase bienzyme KM408_01670 PF02844 Phosphoribosylglycinamide synthetase, N domain KM408_01670 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KM408_01670 PF02843 Phosphoribosylglycinamide synthetase, C domain KM408_01690 PF01884 PcrB family KM408_01695 PF00580 UvrD/REP helicase N-terminal domain KM408_01695 PF13361 UvrD-like helicase C-terminal domain KM408_01700 PF12826 Helix-hairpin-helix motif KM408_01700 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KM408_01700 PF00533 BRCA1 C Terminus (BRCT) domain KM408_01700 PF01653 NAD-dependent DNA ligase adenylation domain KM408_01700 PF03120 NAD-dependent DNA ligase OB-fold domain KM408_01705 PF07537 CamS sex pheromone cAM373 precursor KM408_01710 PF01925 Sulfite exporter TauE/SafE KM408_01715 PF00171 Aldehyde dehydrogenase family KM408_01725 PF00857 Isochorismatase family KM408_01730 PF00005 ABC transporter KM408_01730 PF09383 NIL domain KM408_01735 PF00528 Binding-protein-dependent transport system inner membrane component KM408_01740 PF03180 NLPA lipoprotein KM408_01760 PF01047 MarR family KM408_01770 PF02686 Glu-tRNAGln amidotransferase C subunit KM408_01775 PF01425 Amidase KM408_01780 PF02637 GatB domain KM408_01780 PF02934 GatB/GatE catalytic domain KM408_01785 PF00781 Diacylglycerol kinase catalytic domain KM408_01790 PF13419 Haloacid dehalogenase-like hydrolase KM408_01795 PF00202 Aminotransferase class-III KM408_01800 PF00158 Sigma-54 interaction domain KM408_01805 PF00171 Aldehyde dehydrogenase family KM408_01810 PF00893 Small Multidrug Resistance protein KM408_01815 PF02073 Thermophilic metalloprotease (M29) KM408_01830 PF07662 Na+ dependent nucleoside transporter C-terminus KM408_01830 PF01773 Na+ dependent nucleoside transporter N-terminus KM408_01830 PF07670 Nucleoside recognition KM408_01835 PF05958 tRNA (Uracil-5-)-methyltransferase KM408_01835 PF01938 TRAM domain KM408_01835 PF02475 Met-10+ like-protein KM408_01840 PF01207 Dihydrouridine synthase (Dus) KM408_01850 PF07308 Protein of unknown function (DUF1456) KM408_01865 PF13378 Enolase C-terminal domain-like KM408_01865 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM408_01875 PF03553 Na+/H+ antiporter family KM408_01880 PF01546 Peptidase family M20/M25/M40 KM408_01880 PF07687 Peptidase dimerisation domain KM408_01890 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_01890 PF13192 Thioredoxin domain KM408_01895 PF00578 AhpC/TSA family KM408_01900 PF01636 Phosphotransferase enzyme family KM408_01905 PF01008 Initiation factor 2 subunit family KM408_01910 PF00596 Class II Aldolase and Adducin N-terminal domain KM408_01915 PF01032 FecCD transport family KM408_01920 PF01032 FecCD transport family KM408_01925 PF01497 Periplasmic binding protein KM408_01930 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_01940 PF12728 Helix-turn-helix domain KM408_01975 PF13188 PAS domain KM408_01975 PF00989 PAS fold KM408_01975 PF00512 His Kinase A (phospho-acceptor) domain KM408_01975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_01975 PF13426 PAS domain KM408_01995 PF10127 RNA repair pathway DNA polymerase beta family KM408_02000 PF07690 Major Facilitator Superfamily KM408_02005 PF01266 FAD dependent oxidoreductase KM408_02005 PF00355 Rieske [2Fe-2S] domain KM408_02015 PF00528 Binding-protein-dependent transport system inner membrane component KM408_02020 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM408_02025 PF00005 ABC transporter KM408_02030 PF12729 Four helix bundle sensory module for signal transduction KM408_02030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM408_02030 PF00672 HAMP domain KM408_02035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM408_02035 PF00672 HAMP domain KM408_02035 PF12729 Four helix bundle sensory module for signal transduction KM408_02040 PF16657 Maltogenic Amylase, C-terminal domain KM408_02040 PF00128 Alpha amylase, catalytic domain KM408_02045 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM408_02045 PF00367 phosphotransferase system, EIIB KM408_02045 PF02378 Phosphotransferase system, EIIC KM408_02050 PF03372 Endonuclease/Exonuclease/phosphatase family KM408_02055 PF01061 ABC-2 type transporter KM408_02060 PF01131 DNA topoisomerase KM408_02060 PF01751 Toprim domain KM408_02065 PF02110 Hydroxyethylthiazole kinase family KM408_02070 PF02581 Thiamine monophosphate synthase KM408_02075 PF03605 Anaerobic c4-dicarboxylate membrane transporter KM408_02080 PF00672 HAMP domain KM408_02080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM408_02085 PF01910 Thiamine-binding protein KM408_02090 PF00528 Binding-protein-dependent transport system inner membrane component KM408_02100 PF00005 ABC transporter KM408_02105 PF12848 ABC transporter KM408_02105 PF00005 ABC transporter KM408_02110 PF00704 Glycosyl hydrolases family 18 KM408_02110 PF00041 Fibronectin type III domain KM408_02130 PF00440 Bacterial regulatory proteins, tetR family KM408_02130 PF08360 QacR-like protein, C-terminal region KM408_02150 PF11700 Vacuole effluxer Atg22 like KM408_02165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM408_02165 PF09180 Prolyl-tRNA synthetase, C-terminal KM408_02165 PF03129 Anticodon binding domain KM408_02175 PF00480 ROK family KM408_02180 PF02342 TerD domain KM408_02185 PF02342 TerD domain KM408_02190 PF02342 TerD domain KM408_02195 PF03741 Integral membrane protein TerC family KM408_02200 PF14266 Putative component of 'biosynthetic module' KM408_02205 PF05816 Toxic anion resistance protein (TelA) KM408_02210 PF00689 Cation transporting ATPase, C-terminus KM408_02210 PF00690 Cation transporter/ATPase, N-terminus KM408_02215 PF06569 Protein of unknown function (DUF1128) KM408_02220 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM408_02230 PF03631 Virulence factor BrkB KM408_02240 PF00892 EamA-like transporter family KM408_02260 PF09335 SNARE associated Golgi protein KM408_02275 PF16242 Pyridoxamine 5'-phosphate oxidase like KM408_02280 PF01699 Sodium/calcium exchanger protein KM408_02285 PF14167 YfkD-like protein KM408_02290 PF08756 YfkB-like domain KM408_02290 PF04055 Radical SAM superfamily KM408_02300 PF05683 Fumarase C-terminus KM408_02300 PF05681 Fumarate hydratase (Fumerase) KM408_02305 PF01522 Polysaccharide deacetylase KM408_02315 PF00730 HhH-GPD superfamily base excision DNA repair protein KM408_02320 PF01938 TRAM domain KM408_02320 PF05958 tRNA (Uracil-5-)-methyltransferase KM408_02325 PF14659 Phage integrase, N-terminal SAM-like domain KM408_02325 PF00589 Phage integrase family KM408_02335 PF01381 Helix-turn-helix KM408_02350 PF01381 Helix-turn-helix KM408_02385 PF07319 Primosomal protein DnaI N-terminus KM408_02385 PF01695 IstB-like ATP binding protein KM408_02605 PF01183 Glycosyl hydrolases family 25 KM408_02615 PF01416 tRNA pseudouridine synthase KM408_02625 PF02954 Bacterial regulatory protein, Fis family KM408_02625 PF00158 Sigma-54 interaction domain KM408_02625 PF13426 PAS domain KM408_02635 PF00324 Amino acid permease KM408_02640 PF01546 Peptidase family M20/M25/M40 KM408_02640 PF07687 Peptidase dimerisation domain KM408_02665 PF04960 Glutaminase KM408_02670 PF02378 Phosphotransferase system, EIIC KM408_02670 PF00367 phosphotransferase system, EIIB KM408_02675 PF00144 Beta-lactamase KM408_02690 PF00535 Glycosyl transferase family 2 KM408_02695 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM408_02695 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM408_02695 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM408_02700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM408_02700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM408_02700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM408_02705 PF01370 NAD dependent epimerase/dehydratase family KM408_02705 PF02911 Formyl transferase, C-terminal domain KM408_02705 PF00551 Formyl transferase KM408_02710 PF00535 Glycosyl transferase family 2 KM408_02720 PF02901 Pyruvate formate lyase-like KM408_02720 PF01228 Glycine radical KM408_02725 PF04055 Radical SAM superfamily KM408_02730 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KM408_02730 PF04101 Glycosyltransferase family 28 C-terminal domain KM408_02745 PF01979 Amidohydrolase family KM408_02750 PF01370 NAD dependent epimerase/dehydratase family KM408_02750 PF08338 Domain of unknown function (DUF1731) KM408_02755 PF02631 RecX family KM408_02770 PF08176 Small acid-soluble spore protein K family KM408_02775 PF14043 WVELL protein KM408_02780 PF04307 LexA-binding, inner membrane-associated putative hydrolase KM408_02785 PF14815 NUDIX domain KM408_02785 PF00730 HhH-GPD superfamily base excision DNA repair protein KM408_02795 PF04259 Small, acid-soluble spore protein, gamma-type KM408_02800 PF14182 YgaB-like protein KM408_02805 PF04167 Protein of unknown function (DUF402) KM408_02810 PF00005 ABC transporter KM408_02810 PF00664 ABC transporter transmembrane region KM408_02815 PF06081 Aromatic acid exporter family member 1 KM408_02820 PF01645 Conserved region in glutamate synthase KM408_02820 PF04898 Glutamate synthase central domain KM408_02820 PF00310 Glutamine amidotransferases class-II KM408_02820 PF01493 GXGXG motif KM408_02825 PF00202 Aminotransferase class-III KM408_02830 PF00005 ABC transporter KM408_02845 PF07885 Ion channel KM408_02850 PF00578 AhpC/TSA family KM408_02855 PF01475 Ferric uptake regulator family KM408_02860 PF11023 Zinc-ribbon containing domain KM408_02960 PF01709 Transcriptional regulator KM408_02965 PF13344 Haloacid dehalogenase-like hydrolase KM408_02965 PF00293 NUDIX domain KM408_02970 PF00912 Transglycosylase KM408_02970 PF00905 Penicillin binding protein transpeptidase domain KM408_02975 PF13462 Thioredoxin KM408_02985 PF08331 Domain of unknown function (DUF1730) KM408_02990 PF12671 Putative amidase domain KM408_02995 PF00588 SpoU rRNA Methylase family KM408_03000 PF03707 Bacterial signalling protein N terminal repeat KM408_03000 PF00990 Diguanylate cyclase, GGDEF domain KM408_03000 PF00563 EAL domain KM408_03005 PF06798 PrkA serine protein kinase C-terminal domain KM408_03005 PF08298 PrkA AAA domain KM408_03010 PF04285 Protein of unknown function (DUF444) KM408_03025 PF02028 BCCT, betaine/carnitine/choline family transporter KM408_03030 PF08453 Peptidase family M9 N-terminal KM408_03030 PF01752 Collagenase KM408_03030 PF18496 Collagenase G catalytic helper subdomain KM408_03040 PF01145 SPFH domain / Band 7 family KM408_03040 PF15975 Flotillin KM408_03045 PF02743 Cache domain KM408_03045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM408_03045 PF00672 HAMP domain KM408_03050 PF17203 Single cache domain 3 KM408_03050 PF00989 PAS fold KM408_03050 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM408_03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_03055 PF12431 Transcriptional regulator KM408_03055 PF08279 HTH domain KM408_03055 PF00072 Response regulator receiver domain KM408_03060 PF03600 Citrate transporter KM408_03080 PF04309 Glycerol-3-phosphate responsive antiterminator KM408_03085 PF00005 ABC transporter KM408_03085 PF17912 MalK OB fold domain KM408_03090 PF00528 Binding-protein-dependent transport system inner membrane component KM408_03095 PF00528 Binding-protein-dependent transport system inner membrane component KM408_03100 PF13416 Bacterial extracellular solute-binding protein KM408_03105 PF00149 Calcineurin-like phosphoesterase KM408_03110 PF00072 Response regulator receiver domain KM408_03110 PF00486 Transcriptional regulatory protein, C terminal KM408_03115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_03115 PF00512 His Kinase A (phospho-acceptor) domain KM408_03125 PF13529 Peptidase_C39 like family KM408_03130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM408_03130 PF00672 HAMP domain KM408_03130 PF02743 Cache domain KM408_03135 PF17203 Single cache domain 3 KM408_03135 PF00989 PAS fold KM408_03135 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM408_03135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_03140 PF00072 Response regulator receiver domain KM408_03145 PF03390 2-hydroxycarboxylate transporter family KM408_03150 PF00390 Malic enzyme, N-terminal domain KM408_03150 PF03949 Malic enzyme, NAD binding domain KM408_03160 PF00892 EamA-like transporter family KM408_03165 PF00392 Bacterial regulatory proteins, gntR family KM408_03165 PF00155 Aminotransferase class I and II KM408_03175 PF18698 Histidine kinase sensor domain KM408_03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_03175 PF00989 PAS fold KM408_03175 PF00512 His Kinase A (phospho-acceptor) domain KM408_03175 PF00672 HAMP domain KM408_03180 PF00486 Transcriptional regulatory protein, C terminal KM408_03180 PF00072 Response regulator receiver domain KM408_03185 PF00583 Acetyltransferase (GNAT) family KM408_03185 PF13508 Acetyltransferase (GNAT) domain KM408_03190 PF02634 FdhD/NarQ family KM408_03195 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM408_03195 PF01568 Molydopterin dinucleotide binding domain KM408_03195 PF00037 4Fe-4S binding domain KM408_03195 PF00384 Molybdopterin oxidoreductase KM408_03195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM408_03200 PF07849 Protein of unknown function (DUF1641) KM408_03210 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM408_03210 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM408_03215 PF13520 Amino acid permease KM408_03220 PF01022 Bacterial regulatory protein, arsR family KM408_03225 PF00403 Heavy-metal-associated domain KM408_03230 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KM408_03230 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KM408_03230 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KM408_03245 PF07504 Fungalysin/Thermolysin Propeptide Motif KM408_03245 PF01447 Thermolysin metallopeptidase, catalytic domain KM408_03245 PF03413 Peptidase propeptide and YPEB domain KM408_03245 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM408_03265 PF04294 VanW like protein KM408_03270 PF03816 Cell envelope-related transcriptional attenuator domain KM408_03275 PF07662 Na+ dependent nucleoside transporter C-terminus KM408_03275 PF01773 Na+ dependent nucleoside transporter N-terminus KM408_03280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM408_03285 PF00571 CBS domain KM408_03285 PF03471 Transporter associated domain KM408_03285 PF01595 Cyclin M transmembrane N-terminal domain KM408_03290 PF10415 Fumarase C C-terminus KM408_03290 PF00206 Lyase KM408_03295 PF02652 L-lactate permease KM408_03300 PF01022 Bacterial regulatory protein, arsR family KM408_03305 PF08141 Small acid-soluble spore protein H family KM408_03310 PF00854 POT family KM408_03315 PF01497 Periplasmic binding protein KM408_03320 PF01032 FecCD transport family KM408_03325 PF01032 FecCD transport family KM408_03330 PF00005 ABC transporter KM408_03335 PF08241 Methyltransferase domain KM408_03340 PF00155 Aminotransferase class I and II KM408_03345 PF01370 NAD dependent epimerase/dehydratase family KM408_03350 PF13344 Haloacid dehalogenase-like hydrolase KM408_03350 PF00293 NUDIX domain KM408_03355 PF00092 von Willebrand factor type A domain KM408_03360 PF07728 AAA domain (dynein-related subfamily) KM408_03365 PF13396 Phospholipase_D-nuclease N-terminal KM408_03365 PF13091 PLD-like domain KM408_03380 PF00563 EAL domain KM408_03380 PF03707 Bacterial signalling protein N terminal repeat KM408_03380 PF00990 Diguanylate cyclase, GGDEF domain KM408_03385 PF13520 Amino acid permease KM408_03390 PF00392 Bacterial regulatory proteins, gntR family KM408_03390 PF07702 UTRA domain KM408_03395 PF02378 Phosphotransferase system, EIIC KM408_03395 PF00367 phosphotransferase system, EIIB KM408_03400 PF00128 Alpha amylase, catalytic domain KM408_03400 PF16657 Maltogenic Amylase, C-terminal domain KM408_03415 PF03323 Bacillus/Clostridium GerA spore germination protein KM408_03425 PF01636 Phosphotransferase enzyme family KM408_03430 PF01235 Sodium:alanine symporter family KM408_03435 PF00005 ABC transporter KM408_03440 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM408_03445 PF00528 Binding-protein-dependent transport system inner membrane component KM408_03450 PF00528 Binding-protein-dependent transport system inner membrane component KM408_03455 PF00324 Amino acid permease KM408_03480 PF08279 HTH domain KM408_03480 PF13280 WYL domain KM408_03485 PF01872 RibD C-terminal domain KM408_03490 PF00672 HAMP domain KM408_03490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_03490 PF18698 Histidine kinase sensor domain KM408_03490 PF00512 His Kinase A (phospho-acceptor) domain KM408_03490 PF00989 PAS fold KM408_03495 PF00072 Response regulator receiver domain KM408_03495 PF00486 Transcriptional regulatory protein, C terminal KM408_03505 PF00916 Sulfate permease family KM408_03505 PF01740 STAS domain KM408_03510 PF00582 Universal stress protein family KM408_03520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_03525 PF00528 Binding-protein-dependent transport system inner membrane component KM408_03530 PF00528 Binding-protein-dependent transport system inner membrane component KM408_03535 PF00005 ABC transporter KM408_03535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM408_03540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM408_03540 PF00005 ABC transporter KM408_03545 PF07690 Major Facilitator Superfamily KM408_03550 PF01047 MarR family KM408_03560 PF00356 Bacterial regulatory proteins, lacI family KM408_03565 PF00294 pfkB family carbohydrate kinase KM408_03570 PF05025 RbsD / FucU transport protein family KM408_03575 PF00005 ABC transporter KM408_03580 PF02653 Branched-chain amino acid transport system / permease component KM408_03585 PF13407 Periplasmic binding protein domain KM408_03590 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM408_03595 PF05547 Immune inhibitor A peptidase M6 KM408_03610 PF08240 Alcohol dehydrogenase GroES-like domain KM408_03610 PF00107 Zinc-binding dehydrogenase KM408_03620 PF00882 Zinc dependent phospholipase C KM408_03625 PF03372 Endonuclease/Exonuclease/phosphatase family KM408_03650 PF02673 Bacitracin resistance protein BacA KM408_03655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM408_03655 PF00672 HAMP domain KM408_03655 PF02743 Cache domain KM408_03660 PF06725 3D domain KM408_03660 PF01476 LysM domain KM408_03665 PF01381 Helix-turn-helix KM408_03675 PF04203 Sortase domain KM408_03680 PF00854 POT family KM408_03685 PF05525 Branched-chain amino acid transport protein KM408_03700 PF00324 Amino acid permease KM408_03705 PF00860 Permease family KM408_03730 PF00999 Sodium/hydrogen exchanger family KM408_03730 PF02254 TrkA-N domain KM408_03730 PF02080 TrkA-C domain KM408_03740 PF00510 Cytochrome c oxidase subunit III KM408_03745 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM408_03750 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM408_03755 PF00324 Amino acid permease KM408_03760 PF13529 Peptidase_C39 like family KM408_03765 PF07687 Peptidase dimerisation domain KM408_03765 PF01546 Peptidase family M20/M25/M40 KM408_03770 PF11755 Protein of unknown function (DUF3311) KM408_03775 PF00474 Sodium:solute symporter family KM408_03780 PF03323 Bacillus/Clostridium GerA spore germination protein KM408_03785 PF03845 Spore germination protein KM408_03790 PF05504 Spore germination B3/ GerAC like, C-terminal KM408_03795 PF07664 Ferrous iron transport protein B C terminus KM408_03795 PF02421 Ferrous iron transport protein B KM408_03795 PF07670 Nucleoside recognition KM408_03795 PF17910 FeoB cytosolic helical domain KM408_03800 PF02421 Ferrous iron transport protein B KM408_03800 PF07664 Ferrous iron transport protein B C terminus KM408_03800 PF17910 FeoB cytosolic helical domain KM408_03800 PF07670 Nucleoside recognition KM408_03805 PF04023 FeoA domain KM408_03805 PF07664 Ferrous iron transport protein B C terminus KM408_03805 PF17910 FeoB cytosolic helical domain KM408_03805 PF02421 Ferrous iron transport protein B KM408_03805 PF07670 Nucleoside recognition KM408_03810 PF12849 PBP superfamily domain KM408_03815 PF00528 Binding-protein-dependent transport system inner membrane component KM408_03820 PF00528 Binding-protein-dependent transport system inner membrane component KM408_03830 PF00873 AcrB/AcrD/AcrF family KM408_03950 PF00571 CBS domain KM408_03965 PF08239 Bacterial SH3 domain KM408_03965 PF00246 Zinc carboxypeptidase KM408_03970 PF03070 TENA/THI-4/PQQC family KM408_03975 PF00005 ABC transporter KM408_03980 PF00528 Binding-protein-dependent transport system inner membrane component KM408_03985 PF09084 NMT1/THI5 like KM408_03990 PF02581 Thiamine monophosphate synthase KM408_03995 PF01266 FAD dependent oxidoreductase KM408_04000 PF02597 ThiS family KM408_04005 PF05690 Thiazole biosynthesis protein ThiG KM408_04010 PF00899 ThiF family KM408_04015 PF08543 Phosphomethylpyrimidine kinase KM408_04040 PF03814 Potassium-transporting ATPase A subunit KM408_04050 PF02669 K+-transporting ATPase, c chain KM408_04055 PF02702 Osmosensitive K+ channel His kinase sensor domain KM408_04060 PF07690 Major Facilitator Superfamily KM408_04065 PF01047 MarR family KM408_04080 PF00860 Permease family KM408_04100 PF00294 pfkB family carbohydrate kinase KM408_04105 PF08244 Glycosyl hydrolases family 32 C terminal KM408_04105 PF00251 Glycosyl hydrolases family 32 N-terminal domain KM408_04110 PF00367 phosphotransferase system, EIIB KM408_04110 PF02378 Phosphotransferase system, EIIC KM408_04115 PF00356 Bacterial regulatory proteins, lacI family KM408_04115 PF13407 Periplasmic binding protein domain KM408_04125 PF00085 Thioredoxin KM408_04130 PF02600 Disulfide bond formation protein DsbB KM408_04135 PF14148 YhdB-like protein KM408_04155 PF03323 Bacillus/Clostridium GerA spore germination protein KM408_04165 PF00881 Nitroreductase family KM408_04170 PF04293 SpoVR like protein KM408_04195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM408_04195 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_04200 PF02583 Metal-sensitive transcriptional repressor KM408_04205 PF00581 Rhodanese-like domain KM408_04205 PF01206 Sulfurtransferase TusA KM408_04210 PF00753 Metallo-beta-lactamase superfamily KM408_04210 PF00581 Rhodanese-like domain KM408_04215 PF01206 Sulfurtransferase TusA KM408_04220 PF00581 Rhodanese-like domain KM408_04230 PF13686 DsrE/DsrF/DrsH-like family KM408_04235 PF01925 Sulfite exporter TauE/SafE KM408_04245 PF03816 Cell envelope-related transcriptional attenuator domain KM408_04250 PF08240 Alcohol dehydrogenase GroES-like domain KM408_04250 PF00107 Zinc-binding dehydrogenase KM408_04255 PF02690 Na+/Pi-cotransporter KM408_04260 PF07690 Major Facilitator Superfamily KM408_04270 PF08279 HTH domain KM408_04270 PF05043 Mga helix-turn-helix domain KM408_04270 PF00874 PRD domain KM408_04270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM408_04275 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM408_04280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM408_04285 PF02378 Phosphotransferase system, EIIC KM408_04300 PF06725 3D domain KM408_04300 PF01476 LysM domain KM408_04305 PF02687 FtsX-like permease family KM408_04305 PF12704 MacB-like periplasmic core domain KM408_04310 PF00005 ABC transporter KM408_04320 PF09529 Integral membrane protein (intg_mem_TP0381) KM408_04335 PF05525 Branched-chain amino acid transport protein KM408_04340 PF05067 Manganese containing catalase KM408_04345 PF12652 CotJB protein KM408_04350 PF11007 Spore coat associated protein JA (CotJA) KM408_04365 PF02735 Ku70/Ku80 beta-barrel domain KM408_04375 PF09335 SNARE associated Golgi protein KM408_04410 PF13520 Amino acid permease KM408_04415 PF00999 Sodium/hydrogen exchanger family KM408_04425 PF01418 Helix-turn-helix domain, rpiR family KM408_04425 PF01380 SIS domain KM408_04430 PF01380 SIS domain KM408_04435 PF00367 phosphotransferase system, EIIB KM408_04435 PF02378 Phosphotransferase system, EIIC KM408_04445 PF07681 DoxX KM408_04460 PF00892 EamA-like transporter family KM408_04465 PF01037 Lrp/AsnC ligand binding domain KM408_04475 PF00893 Small Multidrug Resistance protein KM408_04480 PF00893 Small Multidrug Resistance protein KM408_04485 PF17934 Tetracyclin repressor-like, C-terminal domain KM408_04485 PF00440 Bacterial regulatory proteins, tetR family KM408_04490 PF07690 Major Facilitator Superfamily KM408_04495 PF01638 HxlR-like helix-turn-helix KM408_04505 PF02525 Flavodoxin-like fold KM408_04510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_04510 PF12793 Sugar transport-related sRNA regulator N-term KM408_04515 PF07690 Major Facilitator Superfamily KM408_04525 PF01965 DJ-1/PfpI family KM408_04530 PF00199 Catalase KM408_04530 PF06628 Catalase-related immune-responsive KM408_04530 PF18011 C-terminal domain found in long catalases KM408_04540 PF13520 Amino acid permease KM408_04545 PF01177 Asp/Glu/Hydantoin racemase KM408_04555 PF00171 Aldehyde dehydrogenase family KM408_04560 PF00664 ABC transporter transmembrane region KM408_04560 PF00005 ABC transporter KM408_04570 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM408_04575 PF00528 Binding-protein-dependent transport system inner membrane component KM408_04580 PF00005 ABC transporter KM408_04585 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM408_04595 PF14398 YheC/D like ATP-grasp KM408_04605 PF04286 Protein of unknown function (DUF445) KM408_04610 PF06133 Control of competence regulator ComK, YlbF/YmcA KM408_04625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM408_04625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM408_04625 PF00205 Thiamine pyrophosphate enzyme, central domain KM408_04630 PF03306 Alpha-acetolactate decarboxylase KM408_04640 PF02245 Methylpurine-DNA glycosylase (MPG) KM408_04660 PF04055 Radical SAM superfamily KM408_04665 PF00501 AMP-binding enzyme KM408_04665 PF13193 AMP-binding enzyme C-terminal domain KM408_04675 PF01740 STAS domain KM408_04675 PF00916 Sulfate permease family KM408_04695 PF07517 SecA DEAD-like domain KM408_04695 PF01043 SecA preprotein cross-linking domain KM408_04695 PF07516 SecA Wing and Scaffold domain KM408_04700 PF14667 Polysaccharide biosynthesis C-terminal domain KM408_04700 PF01943 Polysaccharide biosynthesis protein KM408_04710 PF02368 Bacterial Ig-like domain (group 2) KM408_04710 PF00395 S-layer homology domain KM408_04710 PF13205 Bacterial Ig-like domain KM408_04715 PF00395 S-layer homology domain KM408_04725 PF03062 MBOAT, membrane-bound O-acyltransferase family KM408_04730 PF03062 MBOAT, membrane-bound O-acyltransferase family KM408_04745 PF00378 Enoyl-CoA hydratase/isomerase KM408_04765 PF05343 M42 glutamyl aminopeptidase KM408_04770 PF01520 N-acetylmuramoyl-L-alanine amidase KM408_04770 PF00395 S-layer homology domain KM408_04785 PF05544 Proline racemase KM408_04790 PF02423 Ornithine cyclodeaminase/mu-crystallin family KM408_04820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_04825 PF00528 Binding-protein-dependent transport system inner membrane component KM408_04830 PF00528 Binding-protein-dependent transport system inner membrane component KM408_04830 PF12911 N-terminal TM domain of oligopeptide transport permease C KM408_04840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM408_04840 PF00005 ABC transporter KM408_04845 PF01541 GIY-YIG catalytic domain KM408_04875 PF00083 Sugar (and other) transporter KM408_04880 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM408_04880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_04885 PF12431 Transcriptional regulator KM408_04885 PF08279 HTH domain KM408_04885 PF00072 Response regulator receiver domain KM408_04890 PF03401 Tripartite tricarboxylate transporter family receptor KM408_04895 PF02342 TerD domain KM408_04920 PF06445 GyrI-like small molecule binding domain KM408_04920 PF13411 MerR HTH family regulatory protein KM408_04935 PF00772 DnaB-like helicase N terminal domain KM408_04935 PF03796 DnaB-like helicase C terminal domain KM408_04960 PF01925 Sulfite exporter TauE/SafE KM408_04975 PF07690 Major Facilitator Superfamily KM408_05020 PF07993 Male sterility protein KM408_05020 PF00550 Phosphopantetheine attachment site KM408_05025 PF00440 Bacterial regulatory proteins, tetR family KM408_05025 PF18665 Tetracyclin repressor-like, C-terminal domain KM408_05045 PF01066 CDP-alcohol phosphatidyltransferase KM408_05065 PF02733 Dak1 domain KM408_05075 PF02733 Dak1 domain KM408_05080 PF02525 Flavodoxin-like fold KM408_05085 PF02082 Transcriptional regulator KM408_05115 PF01966 HD domain KM408_05115 PF00672 HAMP domain KM408_05135 PF00395 S-layer homology domain KM408_05160 PF11181 Heat induced stress protein YflT KM408_05165 PF05532 CsbD-like KM408_05180 PF01740 STAS domain KM408_05185 PF13581 Histidine kinase-like ATPase domain KM408_05190 PF04545 Sigma-70, region 4 KM408_05190 PF04539 Sigma-70 region 3 KM408_05190 PF04542 Sigma-70 region 2 KM408_05200 PF13426 PAS domain KM408_05200 PF07228 Stage II sporulation protein E (SpoIIE) KM408_05205 PF03705 CheR methyltransferase, all-alpha domain KM408_05205 PF01739 CheR methyltransferase, SAM binding domain KM408_05210 PF00072 Response regulator receiver domain KM408_05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_05210 PF00512 His Kinase A (phospho-acceptor) domain KM408_05210 PF01627 Hpt domain KM408_05210 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM408_05235 PF01906 Putative heavy-metal-binding KM408_05245 PF08240 Alcohol dehydrogenase GroES-like domain KM408_05245 PF00107 Zinc-binding dehydrogenase KM408_05250 PF11121 Protein of unknown function (DUF2639) KM408_05265 PF00149 Calcineurin-like phosphoesterase KM408_05270 PF13514 AAA domain KM408_05275 PF12323 Helix-turn-helix domain KM408_05275 PF07282 Putative transposase DNA-binding domain KM408_05275 PF01385 Probable transposase KM408_05285 PF01336 OB-fold nucleic acid binding domain KM408_05285 PF01966 HD domain KM408_05290 PF00440 Bacterial regulatory proteins, tetR family KM408_05295 PF07690 Major Facilitator Superfamily KM408_05300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM408_05310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM408_05315 PF18801 response regulator aspartate phosphatase H, N terminal KM408_05320 PF00561 alpha/beta hydrolase fold KM408_05320 PF08386 TAP-like protein KM408_05340 PF04309 Glycerol-3-phosphate responsive antiterminator KM408_05345 PF00230 Major intrinsic protein KM408_05350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM408_05350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM408_05355 PF01266 FAD dependent oxidoreductase KM408_05355 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KM408_05370 PF08281 Sigma-70, region 4 KM408_05370 PF04542 Sigma-70 region 2 KM408_05395 PF07690 Major Facilitator Superfamily KM408_05400 PF07690 Major Facilitator Superfamily KM408_05410 PF13538 UvrD-like helicase C-terminal domain KM408_05430 PF01047 MarR family KM408_05435 PF12732 YtxH-like protein KM408_05440 PF01230 HIT domain KM408_05445 PF00005 ABC transporter KM408_05450 PF05975 Bacterial ABC transporter protein EcsB KM408_05455 PF12787 EcsC protein family KM408_05465 PF00440 Bacterial regulatory proteins, tetR family KM408_05465 PF17934 Tetracyclin repressor-like, C-terminal domain KM408_05475 PF03703 Bacterial PH domain KM408_05525 PF03703 Bacterial PH domain KM408_05530 PF03703 Bacterial PH domain KM408_05535 PF03992 Antibiotic biosynthesis monooxygenase KM408_05540 PF00912 Transglycosylase KM408_05540 PF00905 Penicillin binding protein transpeptidase domain KM408_05545 PF01208 Uroporphyrinogen decarboxylase (URO-D) KM408_05550 PF00762 Ferrochelatase KM408_05555 PF01593 Flavin containing amine oxidoreductase KM408_05580 PF03965 Penicillinase repressor KM408_05590 PF17932 Tetracyclin repressor-like, C-terminal domain KM408_05590 PF00440 Bacterial regulatory proteins, tetR family KM408_05620 PF00356 Bacterial regulatory proteins, lacI family KM408_05625 PF14149 YhfH-like protein KM408_05630 PF12706 Beta-lactamase superfamily domain KM408_05635 PF10437 Bacterial lipoate protein ligase C-terminus KM408_05635 PF03099 Biotin/lipoate A/B protein ligase family KM408_05645 PF13193 AMP-binding enzyme C-terminal domain KM408_05645 PF00501 AMP-binding enzyme KM408_05655 PF00395 S-layer homology domain KM408_05655 PF01520 N-acetylmuramoyl-L-alanine amidase KM408_05660 PF05593 RHS Repeat KM408_05675 PF05593 RHS Repeat KM408_05715 PF01966 HD domain KM408_05725 PF08281 Sigma-70, region 4 KM408_05725 PF04542 Sigma-70 region 2 KM408_05730 PF06445 GyrI-like small molecule binding domain KM408_05730 PF12833 Helix-turn-helix domain KM408_05745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_05745 PF00512 His Kinase A (phospho-acceptor) domain KM408_05750 PF00072 Response regulator receiver domain KM408_05750 PF00486 Transcriptional regulatory protein, C terminal KM408_05775 PF01435 Peptidase family M48 KM408_05775 PF16491 CAAX prenyl protease N-terminal, five membrane helices KM408_05780 PF02743 Cache domain KM408_05780 PF00672 HAMP domain KM408_05780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM408_05785 PF00892 EamA-like transporter family KM408_05790 PF00150 Cellulase (glycosyl hydrolase family 5) KM408_05790 PF00395 S-layer homology domain KM408_05790 PF03424 Carbohydrate binding domain (family 17/28) KM408_05800 PF00395 S-layer homology domain KM408_05805 PF01274 Malate synthase KM408_05810 PF00463 Isocitrate lyase family KM408_05820 PF00313 'Cold-shock' DNA-binding domain KM408_05835 PF06338 ComK protein KM408_05840 PF09335 SNARE associated Golgi protein KM408_05845 PF10502 Signal peptidase, peptidase S26 KM408_05850 PF12705 PD-(D/E)XK nuclease superfamily KM408_05850 PF13361 UvrD-like helicase C-terminal domain KM408_05855 PF13361 UvrD-like helicase C-terminal domain KM408_05855 PF12705 PD-(D/E)XK nuclease superfamily KM408_05855 PF00580 UvrD/REP helicase N-terminal domain KM408_05865 PF10676 Spore germination protein gerPA/gerPF KM408_05870 PF10970 Spore germination protein GerPE KM408_05880 PF10737 Spore germination protein GerPC KM408_05885 PF10803 Spore germination GerPB KM408_05890 PF10676 Spore germination protein gerPA/gerPF KM408_05900 PF01557 Fumarylacetoacetate (FAA) hydrolase family KM408_05910 PF00202 Aminotransferase class-III KM408_05915 PF07457 Protein of unknown function (DUF1516) KM408_05925 PF00733 Asparagine synthase KM408_05925 PF13537 Glutamine amidotransferase domain KM408_05930 PF00762 Ferrochelatase KM408_05935 PF06628 Catalase-related immune-responsive KM408_05935 PF00199 Catalase KM408_05940 PF00909 Ammonium Transporter Family KM408_05945 PF00128 Alpha amylase, catalytic domain KM408_05955 PF04461 Protein of unknown function (DUF520) KM408_05960 PF17783 CvfB-like winged helix domain KM408_05960 PF13509 S1 domain KM408_05970 PF00639 PPIC-type PPIASE domain KM408_05980 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM408_05980 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM408_05985 PF12758 Protein of unknown function (DUF3813) KM408_06000 PF14168 YjzC-like protein KM408_06005 PF00004 ATPase family associated with various cellular activities (AAA) KM408_06005 PF07724 AAA domain (Cdc48 subfamily) KM408_06005 PF10431 C-terminal, D2-small domain, of ClpB protein KM408_06005 PF02861 Clp amino terminal domain, pathogenicity island component KM408_06005 PF17871 AAA lid domain KM408_06025 PF10815 ComZ KM408_06030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM408_06030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM408_06035 PF00109 Beta-ketoacyl synthase, N-terminal domain KM408_06035 PF02801 Beta-ketoacyl synthase, C-terminal domain KM408_06040 PF10026 Predicted Zn-dependent protease (DUF2268) KM408_06045 PF12227 Protein of unknown function (DUF3603) KM408_06050 PF00579 tRNA synthetases class I (W and Y) KM408_06060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_06065 PF00528 Binding-protein-dependent transport system inner membrane component KM408_06070 PF00528 Binding-protein-dependent transport system inner membrane component KM408_06070 PF12911 N-terminal TM domain of oligopeptide transport permease C KM408_06075 PF00005 ABC transporter KM408_06075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM408_06080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM408_06080 PF00005 ABC transporter KM408_06085 PF01554 MatE KM408_06090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_06100 PF03960 ArsC family KM408_06105 PF03741 Integral membrane protein TerC family KM408_06110 PF05389 Negative regulator of genetic competence (MecA) KM408_06115 PF13091 PLD-like domain KM408_06115 PF13396 Phospholipase_D-nuclease N-terminal KM408_06125 PF01432 Peptidase family M3 KM408_06125 PF08439 Oligopeptidase F KM408_06140 PF01152 Bacterial-like globin KM408_06145 PF01928 CYTH domain KM408_06155 PF04607 Region found in RelA / SpoT proteins KM408_06160 PF01513 ATP-NAD kinase KM408_06165 PF00849 RNA pseudouridylate synthase KM408_06175 PF00149 Calcineurin-like phosphoesterase KM408_06185 PF00535 Glycosyl transferase family 2 KM408_06190 PF08241 Methyltransferase domain KM408_06195 PF05711 Macrocin-O-methyltransferase (TylF) KM408_06205 PF13181 Tetratricopeptide repeat KM408_06205 PF00535 Glycosyl transferase family 2 KM408_06225 PF00483 Nucleotidyl transferase KM408_06230 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KM408_06235 PF16363 GDP-mannose 4,6 dehydratase KM408_06240 PF04321 RmlD substrate binding domain KM408_06260 PF07098 Protein of unknown function (DUF1360) KM408_06280 PF00580 UvrD/REP helicase N-terminal domain KM408_06280 PF13361 UvrD-like helicase C-terminal domain KM408_06285 PF13673 Acetyltransferase (GNAT) domain KM408_06295 PF00756 Putative esterase KM408_06310 PF02368 Bacterial Ig-like domain (group 2) KM408_06315 PF00474 Sodium:solute symporter family KM408_06320 PF04715 Anthranilate synthase component I, N terminal region KM408_06320 PF00425 chorismate binding enzyme KM408_06325 PF00591 Glycosyl transferase family, a/b domain KM408_06325 PF02885 Glycosyl transferase family, helical bundle domain KM408_06325 PF00117 Glutamine amidotransferase class-I KM408_06330 PF02885 Glycosyl transferase family, helical bundle domain KM408_06330 PF00591 Glycosyl transferase family, a/b domain KM408_06335 PF00218 Indole-3-glycerol phosphate synthase KM408_06340 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KM408_06345 PF00291 Pyridoxal-phosphate dependent enzyme KM408_06350 PF00290 Tryptophan synthase alpha chain KM408_06360 PF02652 L-lactate permease KM408_06365 PF10042 Uncharacterized conserved protein (DUF2278) KM408_06390 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_06390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM408_06420 PF02817 e3 binding domain KM408_06420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM408_06420 PF00364 Biotin-requiring enzyme KM408_06425 PF00676 Dehydrogenase E1 component KM408_06425 PF16870 2-oxoglutarate dehydrogenase C-terminal KM408_06425 PF02779 Transketolase, pyrimidine binding domain KM408_06430 PF01381 Helix-turn-helix KM408_06490 PF13649 Methyltransferase domain KM408_06500 PF07943 Penicillin-binding protein 5, C-terminal domain KM408_06500 PF00768 D-alanyl-D-alanine carboxypeptidase KM408_06510 PF12389 Camelysin metallo-endopeptidase KM408_06520 PF12389 Camelysin metallo-endopeptidase KM408_06525 PF08671 Anti-repressor SinI KM408_06525 PF01381 Helix-turn-helix KM408_06535 PF05547 Immune inhibitor A peptidase M6 KM408_06540 PF00171 Aldehyde dehydrogenase family KM408_06545 PF08402 TOBE domain KM408_06545 PF00005 ABC transporter KM408_06550 PF00528 Binding-protein-dependent transport system inner membrane component KM408_06555 PF00528 Binding-protein-dependent transport system inner membrane component KM408_06560 PF13416 Bacterial extracellular solute-binding protein KM408_06570 PF03176 MMPL family KM408_06580 PF00849 RNA pseudouridylate synthase KM408_06580 PF01479 S4 domain KM408_06590 PF00188 Cysteine-rich secretory protein family KM408_06595 PF02754 Cysteine-rich domain KM408_06595 PF13183 4Fe-4S dicluster domain KM408_06600 PF02913 FAD linked oxidases, C-terminal domain KM408_06600 PF01565 FAD binding domain KM408_06605 PF17853 GGDEF-like domain KM408_06605 PF13556 PucR C-terminal helix-turn-helix domain KM408_06605 PF05651 Putative sugar diacid recognition KM408_06615 PF00486 Transcriptional regulatory protein, C terminal KM408_06615 PF00072 Response regulator receiver domain KM408_06620 PF00672 HAMP domain KM408_06620 PF18698 Histidine kinase sensor domain KM408_06620 PF00512 His Kinase A (phospho-acceptor) domain KM408_06620 PF00989 PAS fold KM408_06620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_06625 PF00392 Bacterial regulatory proteins, gntR family KM408_06625 PF07729 FCD domain KM408_06630 PF02754 Cysteine-rich domain KM408_06635 PF02589 LUD domain KM408_06635 PF11870 Domain of unknown function (DUF3390) KM408_06635 PF13183 4Fe-4S dicluster domain KM408_06640 PF02589 LUD domain KM408_06645 PF06750 Bacterial Peptidase A24 N-terminal domain KM408_06645 PF01478 Type IV leader peptidase family KM408_06660 PF01226 Formate/nitrite transporter KM408_06665 PF03741 Integral membrane protein TerC family KM408_06670 PF02386 Cation transport protein KM408_06675 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM408_06680 PF01575 MaoC like domain KM408_06705 PF00561 alpha/beta hydrolase fold KM408_06710 PF01266 FAD dependent oxidoreductase KM408_06715 PF02386 Cation transport protein KM408_06745 PF13419 Haloacid dehalogenase-like hydrolase KM408_06750 PF00266 Aminotransferase class-V KM408_06760 PF00455 DeoR C terminal sensor domain KM408_06760 PF08220 DeoR-like helix-turn-helix domain KM408_06780 PF04748 Divergent polysaccharide deacetylase KM408_06785 PF09388 Spo0E like sporulation regulatory protein KM408_06790 PF02743 Cache domain KM408_06790 PF00512 His Kinase A (phospho-acceptor) domain KM408_06790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_06795 PF01047 MarR family KM408_06805 PF12867 DinB superfamily KM408_06810 PF13426 PAS domain KM408_06810 PF00989 PAS fold KM408_06810 PF00512 His Kinase A (phospho-acceptor) domain KM408_06810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_06810 PF13188 PAS domain KM408_06815 PF06508 Queuosine biosynthesis protein QueC KM408_06820 PF01242 6-pyruvoyl tetrahydropterin synthase KM408_06825 PF04055 Radical SAM superfamily KM408_06830 PF14489 QueF-like protein KM408_06835 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KM408_06865 PF07972 NrdI Flavodoxin like KM408_06885 PF00268 Ribonucleotide reductase, small chain KM408_06890 PF00392 Bacterial regulatory proteins, gntR family KM408_06895 PF00005 ABC transporter KM408_06905 PF00005 ABC transporter KM408_06925 PF01037 Lrp/AsnC ligand binding domain KM408_06935 PF00857 Isochorismatase family KM408_06945 PF02016 LD-carboxypeptidase N-terminal domain KM408_06945 PF17676 LD-carboxypeptidase C-terminal domain KM408_06950 PF03060 Nitronate monooxygenase KM408_06955 PF04914 DltD protein KM408_06960 PF00550 Phosphopantetheine attachment site KM408_06965 PF03062 MBOAT, membrane-bound O-acyltransferase family KM408_06970 PF13193 AMP-binding enzyme C-terminal domain KM408_06970 PF00501 AMP-binding enzyme KM408_06980 PF01546 Peptidase family M20/M25/M40 KM408_06980 PF07687 Peptidase dimerisation domain KM408_06990 PF00258 Flavodoxin KM408_07005 PF01636 Phosphotransferase enzyme family KM408_07025 PF01554 MatE KM408_07030 PF02673 Bacitracin resistance protein BacA KM408_07045 PF01047 MarR family KM408_07055 PF00375 Sodium:dicarboxylate symporter family KM408_07060 PF02386 Cation transport protein KM408_07070 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM408_07080 PF03698 Uncharacterised protein family (UPF0180) KM408_07095 PF01063 Amino-transferase class IV KM408_07100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM408_07100 PF00205 Thiamine pyrophosphate enzyme, central domain KM408_07100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM408_07105 PF10369 Small subunit of acetolactate synthase KM408_07105 PF01842 ACT domain KM408_07110 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM408_07110 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM408_07115 PF00682 HMGL-like KM408_07115 PF08502 LeuA allosteric (dimerisation) domain KM408_07120 PF00180 Isocitrate/isopropylmalate dehydrogenase KM408_07125 PF00330 Aconitase family (aconitate hydratase) KM408_07130 PF00694 Aconitase C-terminal domain KM408_07135 PF13393 Histidyl-tRNA synthetase KM408_07140 PF01634 ATP phosphoribosyltransferase KM408_07145 PF00815 Histidinol dehydrogenase KM408_07150 PF00475 Imidazoleglycerol-phosphate dehydratase KM408_07155 PF00117 Glutamine amidotransferase class-I KM408_07160 PF00977 Histidine biosynthesis protein KM408_07165 PF00977 Histidine biosynthesis protein KM408_07170 PF01502 Phosphoribosyl-AMP cyclohydrolase KM408_07175 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KM408_07180 PF02811 PHP domain KM408_07190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM408_07190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM408_07195 PF01066 CDP-alcohol phosphatidyltransferase KM408_07200 PF00884 Sulfatase KM408_07210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KM408_07210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KM408_07220 PF01507 Phosphoadenosine phosphosulfate reductase family KM408_07225 PF01747 ATP-sulfurylase KM408_07225 PF14306 PUA-like domain KM408_07235 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM408_07235 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM408_07245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM408_07250 PF01903 CbiX KM408_07260 PF00209 Sodium:neurotransmitter symporter family KM408_07270 PF00375 Sodium:dicarboxylate symporter family KM408_07280 PF03553 Na+/H+ antiporter family KM408_07295 PF09922 Cell wall-active antibiotics response 4TMS YvqF KM408_07300 PF07730 Histidine kinase KM408_07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_07300 PF00672 HAMP domain KM408_07305 PF00196 Bacterial regulatory proteins, luxR family KM408_07305 PF00072 Response regulator receiver domain KM408_07315 PF05525 Branched-chain amino acid transport protein KM408_07325 PF08241 Methyltransferase domain KM408_07350 PF00970 Oxidoreductase FAD-binding domain KM408_07350 PF00042 Globin KM408_07350 PF00175 Oxidoreductase NAD-binding domain KM408_07365 PF01925 Sulfite exporter TauE/SafE KM408_07370 PF01384 Phosphate transporter family KM408_07375 PF01865 Protein of unknown function DUF47 KM408_07380 PF00912 Transglycosylase KM408_07380 PF00905 Penicillin binding protein transpeptidase domain KM408_07395 PF00512 His Kinase A (phospho-acceptor) domain KM408_07395 PF00989 PAS fold KM408_07395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_07400 PF01904 Protein of unknown function DUF72 KM408_07410 PF00589 Phage integrase family KM408_07415 PF16736 Single Cache-like KM408_07415 PF00512 His Kinase A (phospho-acceptor) domain KM408_07415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_07415 PF00989 PAS fold KM408_07420 PF01048 Phosphorylase superfamily KM408_07435 PF09924 Uncharacterised conserved protein (DUF2156) KM408_07435 PF03706 Lysylphosphatidylglycerol synthase TM region KM408_07450 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM408_07450 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM408_07455 PF07943 Penicillin-binding protein 5, C-terminal domain KM408_07455 PF00768 D-alanyl-D-alanine carboxypeptidase KM408_07460 PF07670 Nucleoside recognition KM408_07465 PF07670 Nucleoside recognition KM408_07470 PF00849 RNA pseudouridylate synthase KM408_07470 PF01479 S4 domain KM408_07475 PF00578 AhpC/TSA family KM408_07480 PF05140 ResB-like family KM408_07485 PF01578 Cytochrome C assembly protein KM408_07490 PF00072 Response regulator receiver domain KM408_07490 PF00486 Transcriptional regulatory protein, C terminal KM408_07495 PF00989 PAS fold KM408_07495 PF00672 HAMP domain KM408_07495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_07495 PF18698 Histidine kinase sensor domain KM408_07495 PF00512 His Kinase A (phospho-acceptor) domain KM408_07500 PF01923 Cobalamin adenosyltransferase KM408_07515 PF12822 ECF transporter, substrate-specific component KM408_07525 PF14493 Helix-turn-helix domain KM408_07530 PF00271 Helicase conserved C-terminal domain KM408_07530 PF00270 DEAD/DEAH box helicase KM408_07535 PF02517 CPBP intramembrane metalloprotease KM408_07550 PF02310 B12 binding domain KM408_07550 PF02607 B12 binding domain KM408_07550 PF13411 MerR HTH family regulatory protein KM408_07555 PF05389 Negative regulator of genetic competence (MecA) KM408_07560 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM408_07560 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM408_07585 PF00710 Asparaginase, N-terminal KM408_07585 PF17763 Glutaminase/Asparaginase C-terminal domain KM408_07595 PF02224 Cytidylate kinase KM408_07600 PF00575 S1 RNA binding domain KM408_07605 PF01070 FMN-dependent dehydrogenase KM408_07610 PF14140 YpzI-like protein KM408_07620 PF14045 YIEGIA protein KM408_07630 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KM408_07630 PF01926 50S ribosome-binding GTPase KM408_07635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KM408_07635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KM408_07645 PF10966 Protein of unknown function (DUF2768) KM408_07655 PF09547 Stage IV sporulation protein A (spore_IV_A) KM408_07660 PF00216 Bacterial DNA-binding protein KM408_07665 PF01227 GTP cyclohydrolase I KM408_07670 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KM408_07675 PF01209 ubiE/COQ5 methyltransferase family KM408_07680 PF00348 Polyprenyl synthetase KM408_07685 PF00334 Nucleoside diphosphate kinase KM408_07690 PF01264 Chorismate synthase KM408_07695 PF01761 3-dehydroquinate synthase KM408_07700 PF00155 Aminotransferase class I and II KM408_07710 PF08858 IDEAL domain KM408_07710 PF08864 UPF0302 domain KM408_07715 PF10673 Protein of unknown function (DUF2487) KM408_07720 PF00355 Rieske [2Fe-2S] domain KM408_07725 PF00033 Cytochrome b/b6/petB KM408_07730 PF00032 Cytochrome b(C-terminal)/b6/petD KM408_07730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM408_07735 PF07187 Protein of unknown function (DUF1405) KM408_07745 PF09577 Sporulation protein YpjB (SpoYpjB) KM408_07750 PF04298 Putative neutral zinc metallopeptidase KM408_07760 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM408_07760 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM408_07765 PF03819 MazG nucleotide pyrophosphohydrolase domain KM408_07770 PF01113 Dihydrodipicolinate reductase, N-terminus KM408_07770 PF05173 Dihydrodipicolinate reductase, C-terminus KM408_07775 PF02142 MGS-like domain KM408_07780 PF02585 GlcNAc-PI de-N-acetylase KM408_07785 PF13439 Glycosyltransferase Family 4 KM408_07785 PF00534 Glycosyl transferases group 1 KM408_07790 PF01743 Poly A polymerase head domain KM408_07790 PF12627 Probable RNA and SrmB- binding site of polymerase A KM408_07790 PF13735 tRNA nucleotidyltransferase domain 2 putative KM408_07795 PF02237 Biotin protein ligase C terminal domain KM408_07795 PF03099 Biotin/lipoate A/B protein ligase family KM408_07795 PF08279 HTH domain KM408_07805 PF02548 Ketopantoate hydroxymethyltransferase KM408_07810 PF02569 Pantoate-beta-alanine ligase KM408_07815 PF02261 Aspartate decarboxylase KM408_07820 PF00929 Exonuclease KM408_07820 PF13307 Helicase C-terminal domain KM408_07820 PF04851 Type III restriction enzyme, res subunit KM408_07825 PF14084 Protein of unknown function (DUF4264) KM408_07835 PF00155 Aminotransferase class I and II KM408_07840 PF07261 Replication initiation and membrane attachment KM408_07845 PF00730 HhH-GPD superfamily base excision DNA repair protein KM408_07845 PF00633 Helix-hairpin-helix motif KM408_07845 PF10576 Iron-sulfur binding domain of endonuclease III KM408_07855 PF00905 Penicillin binding protein transpeptidase domain KM408_07855 PF00912 Transglycosylase KM408_07860 PF03838 Recombination protein U KM408_07865 PF10720 Protein of unknown function (DUF2515) KM408_07900 PF06908 YspA SLOG family KM408_07905 PF05103 DivIVA protein KM408_07915 PF01170 Putative RNA methylase family UPF0020 KM408_07915 PF02926 THUMP domain KM408_07925 PF13307 Helicase C-terminal domain KM408_07930 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KM408_07940 PF01636 Phosphotransferase enzyme family KM408_07945 PF00557 Metallopeptidase family M24 KM408_07950 PF00156 Phosphoribosyl transferase domain KM408_07955 PF00860 Permease family KM408_07960 PF04235 Protein of unknown function (DUF418) KM408_07965 PF00350 Dynamin family KM408_07975 PF00583 Acetyltransferase (GNAT) family KM408_07980 PF10752 Protein of unknown function (DUF2533) KM408_07985 PF00581 Rhodanese-like domain KM408_08020 PF00689 Cation transporting ATPase, C-terminus KM408_08020 PF00690 Cation transporter/ATPase, N-terminus KM408_08025 PF01367 5'-3' exonuclease, C-terminal SAM fold KM408_08025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM408_08050 PF02397 Bacterial sugar transferase KM408_08065 PF00535 Glycosyl transferase family 2 KM408_08070 PF13439 Glycosyltransferase Family 4 KM408_08070 PF00534 Glycosyl transferases group 1 KM408_08085 PF13673 Acetyltransferase (GNAT) domain KM408_08085 PF18014 Acetyltransferase (GNAT) domain KM408_08105 PF13456 Reverse transcriptase-like KM408_08110 PF01263 Aldose 1-epimerase KM408_08135 PF00313 'Cold-shock' DNA-binding domain KM408_08145 PF01810 LysE type translocator KM408_08160 PF04341 Protein of unknown function, DUF485 KM408_08165 PF00474 Sodium:solute symporter family KM408_08170 PF00202 Aminotransferase class-III KM408_08180 PF00999 Sodium/hydrogen exchanger family KM408_08185 PF00753 Metallo-beta-lactamase superfamily KM408_08185 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM408_08185 PF17770 Ribonuclease J C-terminal domain KM408_08190 PF06445 GyrI-like small molecule binding domain KM408_08190 PF13411 MerR HTH family regulatory protein KM408_08200 PF04239 Protein of unknown function (DUF421) KM408_08205 PF02698 DUF218 domain KM408_08215 PF00881 Nitroreductase family KM408_08260 PF17209 Hfq protein KM408_08270 PF01618 MotA/TolQ/ExbB proton channel family KM408_08275 PF13677 Membrane MotB of proton-channel complex MotA/MotB KM408_08275 PF00691 OmpA family KM408_08280 PF00072 Response regulator receiver domain KM408_08285 PF01584 CheW-like domain KM408_08285 PF02895 Signal transducing histidine kinase, homodimeric domain KM408_08285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_08285 PF01627 Hpt domain KM408_08285 PF07194 P2 response regulator binding domain KM408_08290 PF01584 CheW-like domain KM408_08290 PF02895 Signal transducing histidine kinase, homodimeric domain KM408_08290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_08290 PF01627 Hpt domain KM408_08290 PF07194 P2 response regulator binding domain KM408_08295 PF04509 CheC-like family KM408_08295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM408_08310 PF03705 CheR methyltransferase, all-alpha domain KM408_08310 PF01739 CheR methyltransferase, SAM binding domain KM408_08330 PF00460 Flagella basal body rod protein KM408_08330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM408_08355 PF00460 Flagella basal body rod protein KM408_08360 PF00460 Flagella basal body rod protein KM408_08360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM408_08365 PF02049 Flagellar hook-basal body complex protein FliE KM408_08375 PF01706 FliG C-terminal domain KM408_08375 PF14841 FliG middle domain KM408_08375 PF14842 FliG N-terminal domain KM408_08385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM408_08385 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM408_08385 PF18269 T3SS EscN ATPase C-terminal domain KM408_08410 PF07559 Flagellar basal body protein FlaE KM408_08410 PF00460 Flagella basal body rod protein KM408_08410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM408_08425 PF01584 CheW-like domain KM408_08425 PF00072 Response regulator receiver domain KM408_08430 PF12181 DNA binding domain of the motility gene repressor (MogR) KM408_08435 PF00535 Glycosyl transferase family 2 KM408_08475 PF00669 Bacterial flagellin N-terminal helical region KM408_08475 PF00700 Bacterial flagellin C-terminal helical region KM408_08480 PF01464 Transglycosylase SLT domain KM408_08495 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KM408_08495 PF04509 CheC-like family KM408_08505 PF00813 FliP family KM408_08510 PF01313 Bacterial export proteins, family 3 KM408_08520 PF01312 FlhB HrpN YscU SpaS Family KM408_08525 PF00771 FHIPEP family KM408_08530 PF00448 SRP54-type protein, GTPase domain KM408_08535 PF00460 Flagella basal body rod protein KM408_08535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KM408_08540 PF02272 DHHA1 domain KM408_08540 PF01411 tRNA synthetases class II (A) KM408_08540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM408_08565 PF00440 Bacterial regulatory proteins, tetR family KM408_08565 PF17932 Tetracyclin repressor-like, C-terminal domain KM408_08570 PF17329 Family of unknown function (DUF5367) KM408_08585 PF03992 Antibiotic biosynthesis monooxygenase KM408_08590 PF08141 Small acid-soluble spore protein H family KM408_08610 PF03466 LysR substrate binding domain KM408_08610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM408_08615 PF00005 ABC transporter KM408_08615 PF08402 TOBE domain KM408_08625 PF00528 Binding-protein-dependent transport system inner membrane component KM408_08630 PF00753 Metallo-beta-lactamase superfamily KM408_08630 PF12706 Beta-lactamase superfamily domain KM408_08640 PF10787 Uncharacterised protein from bacillus cereus group KM408_08655 PF00768 D-alanyl-D-alanine carboxypeptidase KM408_08655 PF07943 Penicillin-binding protein 5, C-terminal domain KM408_08665 PF00300 Histidine phosphatase superfamily (branch 1) KM408_08695 PF00733 Asparagine synthase KM408_08695 PF13537 Glutamine amidotransferase domain KM408_08715 PF01545 Cation efflux family KM408_08715 PF16916 Dimerisation domain of Zinc Transporter KM408_08725 PF00392 Bacterial regulatory proteins, gntR family KM408_08725 PF07729 FCD domain KM408_08730 PF00892 EamA-like transporter family KM408_08735 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM408_08735 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM408_08740 PF03773 Predicted permease KM408_08750 PF00535 Glycosyl transferase family 2 KM408_08755 PF03553 Na+/H+ antiporter family KM408_08760 PF10415 Fumarase C C-terminus KM408_08760 PF00206 Lyase KM408_08785 PF03575 Peptidase family S51 KM408_08805 PF02683 Cytochrome C biogenesis protein transmembrane region KM408_08810 PF00578 AhpC/TSA family KM408_08830 PF00291 Pyridoxal-phosphate dependent enzyme KM408_08835 PF04286 Protein of unknown function (DUF445) KM408_08860 PF00196 Bacterial regulatory proteins, luxR family KM408_08860 PF00072 Response regulator receiver domain KM408_08865 PF07730 Histidine kinase KM408_08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_08865 PF13185 GAF domain KM408_08865 PF13492 GAF domain KM408_08870 PF00005 ABC transporter KM408_08885 PF13091 PLD-like domain KM408_08890 PF00696 Amino acid kinase family KM408_08895 PF00375 Sodium:dicarboxylate symporter family KM408_08900 PF00206 Lyase KM408_08900 PF10415 Fumarase C C-terminus KM408_08905 PF00390 Malic enzyme, N-terminal domain KM408_08905 PF03949 Malic enzyme, NAD binding domain KM408_08910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_08915 PF00072 Response regulator receiver domain KM408_08915 PF08664 YcbB domain KM408_08920 PF00271 Helicase conserved C-terminal domain KM408_08920 PF04434 SWIM zinc finger KM408_08920 PF00176 SNF2 family N-terminal domain KM408_08935 PF03590 Aspartate-ammonia ligase KM408_08955 PF00696 Amino acid kinase family KM408_08955 PF13840 ACT domain KM408_08965 PF13761 Domain of unknown function (DUF4166) KM408_08970 PF14158 YndJ-like protein KM408_08975 PF00293 NUDIX domain KM408_08980 PF02368 Bacterial Ig-like domain (group 2) KM408_08980 PF13205 Bacterial Ig-like domain KM408_08980 PF00395 S-layer homology domain KM408_08990 PF07690 Major Facilitator Superfamily KM408_09005 PF02554 Carbon starvation protein CstA KM408_09010 PF03976 Polyphosphate kinase 2 (PPK2) KM408_09020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM408_09020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM408_09030 PF16360 GTP-binding GTPase Middle Region KM408_09030 PF13167 GTP-binding GTPase N-terminal KM408_09030 PF01926 50S ribosome-binding GTPase KM408_09040 PF07690 Major Facilitator Superfamily KM408_09045 PF00291 Pyridoxal-phosphate dependent enzyme KM408_09060 PF01943 Polysaccharide biosynthesis protein KM408_09060 PF14667 Polysaccharide biosynthesis C-terminal domain KM408_09065 PF00209 Sodium:neurotransmitter symporter family KM408_09070 PF01522 Polysaccharide deacetylase KM408_09070 PF03422 Carbohydrate binding module (family 6) KM408_09070 PF00457 Glycosyl hydrolases family 11 KM408_09080 PF04239 Protein of unknown function (DUF421) KM408_09095 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM408_09095 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM408_09110 PF01625 Peptide methionine sulfoxide reductase KM408_09120 PF01063 Amino-transferase class IV KM408_09125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM408_09125 PF00205 Thiamine pyrophosphate enzyme, central domain KM408_09125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM408_09130 PF10369 Small subunit of acetolactate synthase KM408_09135 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KM408_09135 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KM408_09140 PF00920 Dehydratase family KM408_09145 PF00291 Pyridoxal-phosphate dependent enzyme KM408_09145 PF00585 C-terminal regulatory domain of Threonine dehydratase KM408_09155 PF09587 Bacterial capsule synthesis protein PGA_cap KM408_09170 PF07690 Major Facilitator Superfamily KM408_09175 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KM408_09185 PF04397 LytTr DNA-binding domain KM408_09185 PF00072 Response regulator receiver domain KM408_09190 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KM408_09190 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KM408_09205 PF01979 Amidohydrolase family KM408_09210 PF13026 Protein of unknown function (DUF3887) KM408_09210 PF12146 Serine aminopeptidase, S33 KM408_09240 PF04055 Radical SAM superfamily KM408_09240 PF13186 Iron-sulfur cluster-binding domain KM408_09245 PF13302 Acetyltransferase (GNAT) domain KM408_09250 PF00072 Response regulator receiver domain KM408_09250 PF00486 Transcriptional regulatory protein, C terminal KM408_09265 PF01566 Natural resistance-associated macrophage protein KM408_09270 PF12368 Rhodanase C-terminal KM408_09270 PF17773 UPF0176 acylphosphatase like domain KM408_09270 PF00581 Rhodanese-like domain KM408_09280 PF02558 Ketopantoate reductase PanE/ApbA KM408_09280 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM408_09295 PF05791 Bacillus haemolytic enterotoxin (HBL) KM408_09310 PF04198 Putative sugar-binding domain KM408_09315 PF01791 DeoC/LacD family aldolase KM408_09320 PF07662 Na+ dependent nucleoside transporter C-terminus KM408_09320 PF01773 Na+ dependent nucleoside transporter N-terminus KM408_09325 PF00591 Glycosyl transferase family, a/b domain KM408_09325 PF02885 Glycosyl transferase family, helical bundle domain KM408_09325 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM408_09330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM408_09340 PF05979 Bacterial protein of unknown function (DUF896) KM408_09360 PF05195 Aminopeptidase P, N-terminal domain KM408_09360 PF00557 Metallopeptidase family M24 KM408_09365 PF07731 Multicopper oxidase KM408_09365 PF07732 Multicopper oxidase KM408_09370 PF01551 Peptidase family M23 KM408_09380 PF01396 Topoisomerase DNA binding C4 zinc finger KM408_09380 PF13342 C-terminal repeat of topoisomerase KM408_09380 PF01751 Toprim domain KM408_09380 PF01131 DNA topoisomerase KM408_09395 PF02525 Flavodoxin-like fold KM408_09410 PF04234 CopC domain KM408_09410 PF05425 Copper resistance protein D KM408_09410 PF13115 YtkA-like KM408_09415 PF07987 Domain of unkown function (DUF1775) KM408_09425 PF00892 EamA-like transporter family KM408_09430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM408_09430 PF03466 LysR substrate binding domain KM408_09435 PF02082 Transcriptional regulator KM408_09440 PF01323 DSBA-like thioredoxin domain KM408_09445 PF00881 Nitroreductase family KM408_09450 PF01425 Amidase KM408_09455 PF01594 AI-2E family transporter KM408_09460 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM408_09460 PF00056 lactate/malate dehydrogenase, NAD binding domain KM408_09465 PF01593 Flavin containing amine oxidoreductase KM408_09470 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM408_09470 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM408_09485 PF13193 AMP-binding enzyme C-terminal domain KM408_09485 PF00501 AMP-binding enzyme KM408_09490 PF01575 MaoC like domain KM408_09495 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM408_09495 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM408_09505 PF12399 Branched-chain amino acid ATP-binding cassette transporter KM408_09505 PF00005 ABC transporter KM408_09510 PF00005 ABC transporter KM408_09515 PF02653 Branched-chain amino acid transport system / permease component KM408_09525 PF03466 LysR substrate binding domain KM408_09525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM408_09535 PF14552 Tautomerase enzyme KM408_09545 PF01047 MarR family KM408_09555 PF01654 Cytochrome bd terminal oxidase subunit I KM408_09560 PF02322 Cytochrome bd terminal oxidase subunit II KM408_09565 PF00664 ABC transporter transmembrane region KM408_09565 PF00005 ABC transporter KM408_09570 PF00005 ABC transporter KM408_09570 PF00664 ABC transporter transmembrane region KM408_09585 PF02016 LD-carboxypeptidase N-terminal domain KM408_09585 PF17676 LD-carboxypeptidase C-terminal domain KM408_09590 PF00768 D-alanyl-D-alanine carboxypeptidase KM408_09590 PF07943 Penicillin-binding protein 5, C-terminal domain KM408_09605 PF01476 LysM domain KM408_09605 PF00877 NlpC/P60 family KM408_09620 PF00486 Transcriptional regulatory protein, C terminal KM408_09620 PF00072 Response regulator receiver domain KM408_09625 PF16736 Single Cache-like KM408_09625 PF00989 PAS fold KM408_09625 PF00512 His Kinase A (phospho-acceptor) domain KM408_09625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_09635 PF00106 short chain dehydrogenase KM408_09645 PF04439 Streptomycin adenylyltransferase KM408_09650 PF01522 Polysaccharide deacetylase KM408_09670 PF01842 ACT domain KM408_09670 PF00742 Homoserine dehydrogenase KM408_09670 PF03447 Homoserine dehydrogenase, NAD binding domain KM408_09675 PF00291 Pyridoxal-phosphate dependent enzyme KM408_09680 PF00288 GHMP kinases N terminal domain KM408_09680 PF08544 GHMP kinases C terminal KM408_09695 PF03816 Cell envelope-related transcriptional attenuator domain KM408_09705 PF00072 Response regulator receiver domain KM408_09705 PF00486 Transcriptional regulatory protein, C terminal KM408_09710 PF16736 Single Cache-like KM408_09710 PF00989 PAS fold KM408_09710 PF00512 His Kinase A (phospho-acceptor) domain KM408_09710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_09715 PF01522 Polysaccharide deacetylase KM408_09725 PF02308 MgtC family KM408_09730 PF00583 Acetyltransferase (GNAT) family KM408_09735 PF06276 Ferric iron reductase FhuF-like transporter KM408_09735 PF04183 IucA / IucC family KM408_09740 PF06276 Ferric iron reductase FhuF-like transporter KM408_09740 PF04183 IucA / IucC family KM408_09745 PF00501 AMP-binding enzyme KM408_09745 PF13193 AMP-binding enzyme C-terminal domain KM408_09760 PF01261 Xylose isomerase-like TIM barrel KM408_09765 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM408_09775 PF01810 LysE type translocator KM408_09785 PF01734 Patatin-like phospholipase KM408_09810 PF13344 Haloacid dehalogenase-like hydrolase KM408_09810 PF00293 NUDIX domain KM408_09815 PF02540 NAD synthase KM408_09825 PF18277 AbrB C-terminal domain KM408_09825 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM408_09830 PF00082 Subtilase family KM408_09835 PF01022 Bacterial regulatory protein, arsR family KM408_09840 PF00248 Aldo/keto reductase family KM408_09845 PF07690 Major Facilitator Superfamily KM408_09865 PF03193 RsgA GTPase KM408_09870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM408_09870 PF00672 HAMP domain KM408_09870 PF02743 Cache domain KM408_09890 PF00210 Ferritin-like domain KM408_09905 PF00296 Luciferase-like monooxygenase KM408_09915 PF01593 Flavin containing amine oxidoreductase KM408_09925 PF00248 Aldo/keto reductase family KM408_09930 PF02492 CobW/HypB/UreG, nucleotide-binding domain KM408_09930 PF07683 Cobalamin synthesis protein cobW C-terminal domain KM408_09935 PF00583 Acetyltransferase (GNAT) family KM408_09990 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM408_09990 PF01297 Zinc-uptake complex component A periplasmic KM408_10000 PF13460 NAD(P)H-binding KM408_10005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM408_10010 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM408_10010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM408_10020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_10025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM408_10035 PF00300 Histidine phosphatase superfamily (branch 1) KM408_10045 PF08757 CotH kinase protein KM408_10050 PF00293 NUDIX domain KM408_10055 PF09335 SNARE associated Golgi protein KM408_10060 PF01943 Polysaccharide biosynthesis protein KM408_10060 PF14667 Polysaccharide biosynthesis C-terminal domain KM408_10070 PF03773 Predicted permease KM408_10075 PF09323 Domain of unknown function (DUF1980) KM408_10080 PF03061 Thioesterase superfamily KM408_10090 PF13091 PLD-like domain KM408_10090 PF13396 Phospholipase_D-nuclease N-terminal KM408_10105 PF13460 NAD(P)H-binding KM408_10110 PF04306 Protein of unknown function (DUF456) KM408_10115 PF03471 Transporter associated domain KM408_10115 PF00571 CBS domain KM408_10115 PF01595 Cyclin M transmembrane N-terminal domain KM408_10130 PF05525 Branched-chain amino acid transport protein KM408_10135 PF01588 Putative tRNA binding domain KM408_10155 PF07454 Stage II sporulation protein P (SpoIIP) KM408_10165 PF02557 D-alanyl-D-alanine carboxypeptidase KM408_10175 PF01425 Amidase KM408_10180 PF07690 Major Facilitator Superfamily KM408_10190 PF01145 SPFH domain / Band 7 family KM408_10195 PF00300 Histidine phosphatase superfamily (branch 1) KM408_10210 PF01168 Alanine racemase, N-terminal domain KM408_10210 PF00842 Alanine racemase, C-terminal domain KM408_10215 PF13847 Methyltransferase domain KM408_10230 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM408_10235 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM408_10235 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM408_10240 PF00392 Bacterial regulatory proteins, gntR family KM408_10240 PF00155 Aminotransferase class I and II KM408_10265 PF00583 Acetyltransferase (GNAT) family KM408_10315 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM408_10340 PF01209 ubiE/COQ5 methyltransferase family KM408_10345 PF01268 Formate--tetrahydrofolate ligase KM408_10355 PF00270 DEAD/DEAH box helicase KM408_10355 PF00271 Helicase conserved C-terminal domain KM408_10365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM408_10375 PF00107 Zinc-binding dehydrogenase KM408_10375 PF08240 Alcohol dehydrogenase GroES-like domain KM408_10380 PF08281 Sigma-70, region 4 KM408_10380 PF04542 Sigma-70 region 2 KM408_10405 PF00255 Glutathione peroxidase KM408_10410 PF11992 Domain of unknown function (DUF3488) KM408_10410 PF01841 Transglutaminase-like superfamily KM408_10410 PF13559 Domain of unknown function (DUF4129) KM408_10415 PF01882 Protein of unknown function DUF58 KM408_10420 PF17863 AAA lid domain KM408_10420 PF07726 ATPase family associated with various cellular activities (AAA) KM408_10435 PF14710 Respiratory nitrate reductase alpha N-terminal KM408_10435 PF01568 Molydopterin dinucleotide binding domain KM408_10435 PF00384 Molybdopterin oxidoreductase KM408_10440 PF14711 Respiratory nitrate reductase beta C-terminal KM408_10440 PF13247 4Fe-4S dicluster domain KM408_10445 PF02613 Nitrate reductase delta subunit KM408_10450 PF02665 Nitrate reductase gamma subunit KM408_10455 PF00392 Bacterial regulatory proteins, gntR family KM408_10455 PF00155 Aminotransferase class I and II KM408_10460 PF00005 ABC transporter KM408_10470 PF00325 Bacterial regulatory proteins, crp family KM408_10470 PF00027 Cyclic nucleotide-binding domain KM408_10475 PF06463 Molybdenum Cofactor Synthesis C KM408_10475 PF04055 Radical SAM superfamily KM408_10480 PF00899 ThiF family KM408_10485 PF03454 MoeA C-terminal region (domain IV) KM408_10485 PF00994 Probable molybdopterin binding domain KM408_10485 PF03453 MoeA N-terminal region (domain I and II) KM408_10490 PF02391 MoaE protein KM408_10500 PF07690 Major Facilitator Superfamily KM408_10520 PF01903 CbiX KM408_10525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KM408_10530 PF00355 Rieske [2Fe-2S] domain KM408_10535 PF04324 BFD-like [2Fe-2S] binding domain KM408_10535 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KM408_10535 PF18267 Rubredoxin NAD+ reductase C-terminal domain KM408_10535 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_10535 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KM408_10540 PF01814 Hemerythrin HHE cation binding domain KM408_10540 PF04405 Domain of Unknown function (DUF542) KM408_10575 PF04232 Stage V sporulation protein S (SpoVS) KM408_10590 PF01510 N-acetylmuramoyl-L-alanine amidase KM408_10605 PF01966 HD domain KM408_10610 PF00005 ABC transporter KM408_10610 PF12848 ABC transporter KM408_10610 PF16326 ABC transporter C-terminal domain KM408_10625 PF00436 Single-strand binding protein family KM408_10630 PF00440 Bacterial regulatory proteins, tetR family KM408_10640 PF08712 Scaffold protein Nfu/NifU N terminal KM408_10640 PF13769 Virulence factor KM408_10650 PF06491 Disulphide isomerase KM408_10655 PF04445 Putative SAM-dependent methyltransferase KM408_10660 PF03485 Arginyl tRNA synthetase N terminal domain KM408_10660 PF05746 DALR anticodon binding domain KM408_10660 PF00750 tRNA synthetases class I (R) KM408_10685 PF08264 Anticodon-binding domain of tRNA KM408_10685 PF00133 tRNA synthetases class I (I, L, M and V) KM408_10705 PF00152 tRNA synthetases class II (D, K and N) KM408_10705 PF01336 OB-fold nucleic acid binding domain KM408_10725 PF01580 FtsK/SpoIIIE family KM408_10725 PF12538 DNA transporter KM408_10795 PF02595 Glycerate kinase family KM408_10800 PF00939 Sodium:sulfate symporter transmembrane region KM408_10805 PF00486 Transcriptional regulatory protein, C terminal KM408_10805 PF00072 Response regulator receiver domain KM408_10810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_10810 PF00512 His Kinase A (phospho-acceptor) domain KM408_10810 PF00672 HAMP domain KM408_10825 PF00209 Sodium:neurotransmitter symporter family KM408_10840 PF10997 Alternate to MurJ KM408_10845 PF13419 Haloacid dehalogenase-like hydrolase KM408_10855 PF00465 Iron-containing alcohol dehydrogenase KM408_10860 PF01177 Asp/Glu/Hydantoin racemase KM408_10865 PF01980 tRNA-methyltransferase O KM408_10870 PF00583 Acetyltransferase (GNAT) family KM408_10885 PF00005 ABC transporter KM408_10895 PF14005 YpjP-like protein KM408_10900 PF13419 Haloacid dehalogenase-like hydrolase KM408_10920 PF07930 D-aminopeptidase, domain B KM408_10920 PF00144 Beta-lactamase KM408_10925 PF00303 Thymidylate synthase KM408_10930 PF00186 Dihydrofolate reductase KM408_10935 PF00905 Penicillin binding protein transpeptidase domain KM408_10935 PF03717 Penicillin-binding Protein dimerisation domain KM408_10935 PF05223 NTF2-like N-terminal transpeptidase domain KM408_10940 PF02525 Flavodoxin-like fold KM408_10945 PF01553 Acyltransferase KM408_10950 PF03006 Haemolysin-III related KM408_10955 PF02416 mttA/Hcf106 family KM408_10960 PF00902 Sec-independent protein translocase protein (TatC) KM408_10970 PF02645 Uncharacterised protein, DegV family COG1307 KM408_10980 PF02630 SCO1/SenC KM408_10985 PF00011 Hsp20/alpha crystallin family KM408_10990 PF00733 Asparagine synthase KM408_10990 PF13537 Glutamine amidotransferase domain KM408_11005 PF01497 Periplasmic binding protein KM408_11010 PF01063 Amino-transferase class IV KM408_11015 PF00881 Nitroreductase family KM408_11035 PF00293 NUDIX domain KM408_11040 PF00011 Hsp20/alpha crystallin family KM408_11045 PF00924 Mechanosensitive ion channel KM408_11050 PF07730 Histidine kinase KM408_11050 PF13185 GAF domain KM408_11055 PF00072 Response regulator receiver domain KM408_11055 PF00196 Bacterial regulatory proteins, luxR family KM408_11065 PF08240 Alcohol dehydrogenase GroES-like domain KM408_11065 PF00107 Zinc-binding dehydrogenase KM408_11090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM408_11090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM408_11095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM408_11095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM408_11110 PF03358 NADPH-dependent FMN reductase KM408_11125 PF00571 CBS domain KM408_11125 PF00005 ABC transporter KM408_11130 PF00528 Binding-protein-dependent transport system inner membrane component KM408_11135 PF13520 Amino acid permease KM408_11165 PF01595 Cyclin M transmembrane N-terminal domain KM408_11165 PF03471 Transporter associated domain KM408_11165 PF00571 CBS domain KM408_11170 PF00171 Aldehyde dehydrogenase family KM408_11175 PF07997 Protein of unknown function (DUF1694) KM408_11180 PF09385 Histidine kinase N terminal KM408_11190 PF00202 Aminotransferase class-III KM408_11195 PF01144 Coenzyme A transferase KM408_11200 PF01144 Coenzyme A transferase KM408_11205 PF01546 Peptidase family M20/M25/M40 KM408_11205 PF07687 Peptidase dimerisation domain KM408_11210 PF00583 Acetyltransferase (GNAT) family KM408_11215 PF00158 Sigma-54 interaction domain KM408_11215 PF13426 PAS domain KM408_11215 PF02954 Bacterial regulatory protein, Fis family KM408_11220 PF12544 Lysine-2,3-aminomutase KM408_11225 PF14122 YokU-like protein, putative antitoxin KM408_11230 PF06855 YozE SAM-like fold KM408_11245 PF14162 YozD-like protein KM408_11260 PF07070 SpoOM protein KM408_11265 PF01569 PAP2 superfamily KM408_11270 PF01545 Cation efflux family KM408_11270 PF16916 Dimerisation domain of Zinc Transporter KM408_11275 PF00085 Thioredoxin KM408_11290 PF14436 Bacterial EndoU nuclease KM408_11290 PF04740 LXG domain of WXG superfamily KM408_11295 PF00395 S-layer homology domain KM408_11295 PF00150 Cellulase (glycosyl hydrolase family 5) KM408_11295 PF03424 Carbohydrate binding domain (family 17/28) KM408_11305 PF04471 Restriction endonuclease KM408_11415 PF10676 Spore germination protein gerPA/gerPF KM408_11440 PF07690 Major Facilitator Superfamily KM408_11445 PF01521 Iron-sulphur cluster biosynthesis KM408_11450 PF00285 Citrate synthase, C-terminal domain KM408_11455 PF03972 MmgE/PrpD family KM408_11465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM408_11465 PF02770 Acyl-CoA dehydrogenase, middle domain KM408_11465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM408_11470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KM408_11470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM408_11475 PF00171 Aldehyde dehydrogenase family KM408_11480 PF01810 LysE type translocator KM408_11485 PF00378 Enoyl-CoA hydratase/isomerase KM408_11495 PF10763 Protein of unknown function (DUF2584) KM408_11500 PF00149 Calcineurin-like phosphoesterase KM408_11500 PF12320 Type 5 capsule protein repressor C-terminal domain KM408_11505 PF13476 AAA domain KM408_11520 PF01022 Bacterial regulatory protein, arsR family KM408_11530 PF07690 Major Facilitator Superfamily KM408_11535 PF00106 short chain dehydrogenase KM408_11540 PF00425 chorismate binding enzyme KM408_11545 PF00501 AMP-binding enzyme KM408_11545 PF13193 AMP-binding enzyme C-terminal domain KM408_11550 PF00857 Isochorismatase family KM408_11550 PF00550 Phosphopantetheine attachment site KM408_11555 PF13193 AMP-binding enzyme C-terminal domain KM408_11555 PF00501 AMP-binding enzyme KM408_11555 PF00668 Condensation domain KM408_11555 PF00550 Phosphopantetheine attachment site KM408_11555 PF00975 Thioesterase domain KM408_11560 PF03621 MbtH-like protein KM408_11565 PF07690 Major Facilitator Superfamily KM408_11580 PF00216 Bacterial DNA-binding protein KM408_11590 PF05163 DinB family KM408_11595 PF00082 Subtilase family KM408_11600 PF01235 Sodium:alanine symporter family KM408_11615 PF16291 Domain of unknown function (DUF4937 KM408_11620 PF01479 S4 domain KM408_11620 PF00849 RNA pseudouridylate synthase KM408_11625 PF02824 TGS domain KM408_11625 PF03129 Anticodon binding domain KM408_11625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM408_11625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM408_11640 PF12146 Serine aminopeptidase, S33 KM408_11645 PF07690 Major Facilitator Superfamily KM408_11665 PF13649 Methyltransferase domain KM408_11710 PF00753 Metallo-beta-lactamase superfamily KM408_11710 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM408_11720 PF03176 MMPL family KM408_11730 PF00302 Chloramphenicol acetyltransferase KM408_11745 PF00583 Acetyltransferase (GNAT) family KM408_11775 PF01593 Flavin containing amine oxidoreductase KM408_11785 PF13302 Acetyltransferase (GNAT) domain KM408_11795 PF00313 'Cold-shock' DNA-binding domain KM408_11860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM408_11860 PF03466 LysR substrate binding domain KM408_11865 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM408_11865 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM408_11880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM408_11880 PF03466 LysR substrate binding domain KM408_11885 PF03473 MOSC domain KM408_11885 PF03475 3-alpha domain KM408_11900 PF00664 ABC transporter transmembrane region KM408_11900 PF00005 ABC transporter KM408_11905 PF00005 ABC transporter KM408_11905 PF00664 ABC transporter transmembrane region KM408_11920 PF01810 LysE type translocator KM408_11925 PF01381 Helix-turn-helix KM408_11925 PF07883 Cupin domain KM408_11950 PF00890 FAD binding domain KM408_11955 PF04542 Sigma-70 region 2 KM408_11955 PF08281 Sigma-70, region 4 KM408_11955 PF12680 SnoaL-like domain KM408_11980 PF02638 Glycosyl hydrolase-like 10 KM408_11990 PF02378 Phosphotransferase system, EIIC KM408_12000 PF03702 Anhydro-N-acetylmuramic acid kinase KM408_12005 PF01869 BadF/BadG/BcrA/BcrD ATPase family KM408_12010 PF02660 Glycerol-3-phosphate acyltransferase KM408_12015 PF00266 Aminotransferase class-V KM408_12020 PF00291 Pyridoxal-phosphate dependent enzyme KM408_12035 PF00753 Metallo-beta-lactamase superfamily KM408_12035 PF16123 Hydroxyacylglutathione hydrolase C-terminus KM408_12050 PF00270 DEAD/DEAH box helicase KM408_12050 PF00271 Helicase conserved C-terminal domain KM408_12065 PF00440 Bacterial regulatory proteins, tetR family KM408_12065 PF17932 Tetracyclin repressor-like, C-terminal domain KM408_12080 PF00005 ABC transporter KM408_12080 PF02687 FtsX-like permease family KM408_12080 PF12704 MacB-like periplasmic core domain KM408_12085 PF09313 Domain of unknown function (DUF1971) KM408_12085 PF03848 Tellurite resistance protein TehB KM408_12095 PF08241 Methyltransferase domain KM408_12100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM408_12100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM408_12100 PF00205 Thiamine pyrophosphate enzyme, central domain KM408_12105 PF12802 MarR family KM408_12110 PF00300 Histidine phosphatase superfamily (branch 1) KM408_12115 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KM408_12145 PF01546 Peptidase family M20/M25/M40 KM408_12145 PF07687 Peptidase dimerisation domain KM408_12160 PF04542 Sigma-70 region 2 KM408_12160 PF08281 Sigma-70, region 4 KM408_12170 PF03717 Penicillin-binding Protein dimerisation domain KM408_12170 PF00905 Penicillin binding protein transpeptidase domain KM408_12185 PF01569 PAP2 superfamily KM408_12190 PF00356 Bacterial regulatory proteins, lacI family KM408_12195 PF07690 Major Facilitator Superfamily KM408_12200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM408_12200 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM408_12205 PF00294 pfkB family carbohydrate kinase KM408_12210 PF00171 Aldehyde dehydrogenase family KM408_12215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM408_12215 PF00205 Thiamine pyrophosphate enzyme, central domain KM408_12215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM408_12220 PF01261 Xylose isomerase-like TIM barrel KM408_12225 PF01116 Fructose-bisphosphate aldolase class-II KM408_12230 PF04962 KduI/IolB family KM408_12255 PF18801 response regulator aspartate phosphatase H, N terminal KM408_12260 PF01381 Helix-turn-helix KM408_12275 PF02557 D-alanyl-D-alanine carboxypeptidase KM408_12285 PF00395 S-layer homology domain KM408_12285 PF01520 N-acetylmuramoyl-L-alanine amidase KM408_12295 PF00440 Bacterial regulatory proteins, tetR family KM408_12300 PF16326 ABC transporter C-terminal domain KM408_12300 PF00005 ABC transporter KM408_12310 PF03707 Bacterial signalling protein N terminal repeat KM408_12310 PF00990 Diguanylate cyclase, GGDEF domain KM408_12310 PF00563 EAL domain KM408_12315 PF13302 Acetyltransferase (GNAT) domain KM408_12330 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_12335 PF00581 Rhodanese-like domain KM408_12350 PF00005 ABC transporter KM408_12360 PF00440 Bacterial regulatory proteins, tetR family KM408_12360 PF08359 YsiA-like protein, C-terminal region KM408_12375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM408_12375 PF02770 Acyl-CoA dehydrogenase, middle domain KM408_12375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM408_12380 PF02785 Biotin carboxylase C-terminal domain KM408_12380 PF00289 Biotin carboxylase, N-terminal domain KM408_12380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM408_12385 PF00364 Biotin-requiring enzyme KM408_12390 PF00682 HMGL-like KM408_12395 PF00378 Enoyl-CoA hydratase/isomerase KM408_12400 PF01039 Carboxyl transferase domain KM408_12405 PF16177 Acetyl-coenzyme A synthetase N-terminus KM408_12405 PF00501 AMP-binding enzyme KM408_12405 PF13193 AMP-binding enzyme C-terminal domain KM408_12415 PF00583 Acetyltransferase (GNAT) family KM408_12420 PF00485 Phosphoribulokinase / Uridine kinase family KM408_12430 PF05163 DinB family KM408_12435 PF00768 D-alanyl-D-alanine carboxypeptidase KM408_12435 PF07943 Penicillin-binding protein 5, C-terminal domain KM408_12440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_12440 PF00512 His Kinase A (phospho-acceptor) domain KM408_12445 PF00486 Transcriptional regulatory protein, C terminal KM408_12445 PF00072 Response regulator receiver domain KM408_12450 PF01966 HD domain KM408_12455 PF13021 Domain of unknown function (DUF3885) KM408_12460 PF01048 Phosphorylase superfamily KM408_12500 PF17760 UvrA interaction domain KM408_12500 PF17755 UvrA DNA-binding domain KM408_12500 PF17760 UvrA interaction domain KM408_12500 PF17755 UvrA DNA-binding domain KM408_12515 PF00144 Beta-lactamase KM408_12520 PF09278 MerR, DNA binding KM408_12520 PF00376 MerR family regulatory protein KM408_12525 PF07690 Major Facilitator Superfamily KM408_12545 PF01636 Phosphotransferase enzyme family KM408_12550 PF12833 Helix-turn-helix domain KM408_12565 PF00392 Bacterial regulatory proteins, gntR family KM408_12565 PF00155 Aminotransferase class I and II KM408_12580 PF08240 Alcohol dehydrogenase GroES-like domain KM408_12580 PF00107 Zinc-binding dehydrogenase KM408_12610 PF07486 Cell Wall Hydrolase KM408_12620 PF00072 Response regulator receiver domain KM408_12620 PF00486 Transcriptional regulatory protein, C terminal KM408_12635 PF12848 ABC transporter KM408_12635 PF00005 ABC transporter KM408_12650 PF00005 ABC transporter KM408_12675 PF01842 ACT domain KM408_12675 PF00742 Homoserine dehydrogenase KM408_12675 PF03447 Homoserine dehydrogenase, NAD binding domain KM408_12680 PF00155 Aminotransferase class I and II KM408_12680 PF00392 Bacterial regulatory proteins, gntR family KM408_12685 PF07478 D-ala D-ala ligase C-terminus KM408_12685 PF01820 D-ala D-ala ligase N-terminus KM408_12690 PF03070 TENA/THI-4/PQQC family KM408_12755 PF00067 Cytochrome P450 KM408_12765 PF00132 Bacterial transferase hexapeptide (six repeats) KM408_12770 PF07561 Domain of Unknown Function (DUF1540) KM408_12780 PF00067 Cytochrome P450 KM408_12800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_12800 PF00512 His Kinase A (phospho-acceptor) domain KM408_12800 PF00989 PAS fold KM408_12800 PF13188 PAS domain KM408_12800 PF13426 PAS domain KM408_12805 PF03717 Penicillin-binding Protein dimerisation domain KM408_12805 PF00905 Penicillin binding protein transpeptidase domain KM408_12810 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KM408_12815 PF01177 Asp/Glu/Hydantoin racemase KM408_12820 PF07155 ECF-type riboflavin transporter, S component KM408_12825 PF00005 ABC transporter KM408_12825 PF12558 ATP-binding cassette cobalt transporter KM408_12840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_12840 PF00512 His Kinase A (phospho-acceptor) domain KM408_12850 PF04229 GrpB protein KM408_12855 PF00107 Zinc-binding dehydrogenase KM408_12855 PF08240 Alcohol dehydrogenase GroES-like domain KM408_12860 PF00905 Penicillin binding protein transpeptidase domain KM408_12860 PF03717 Penicillin-binding Protein dimerisation domain KM408_12860 PF03793 PASTA domain KM408_12870 PF00144 Beta-lactamase KM408_12870 PF11954 Domain of unknown function (DUF3471) KM408_12905 PF01965 DJ-1/PfpI family KM408_12920 PF00144 Beta-lactamase KM408_12935 PF07690 Major Facilitator Superfamily KM408_12950 PF03009 Glycerophosphoryl diester phosphodiesterase family KM408_12970 PF00892 EamA-like transporter family KM408_12975 PF01270 Glycosyl hydrolases family 8 KM408_12985 PF00293 NUDIX domain KM408_12995 PF00144 Beta-lactamase KM408_13005 PF07690 Major Facilitator Superfamily KM408_13020 PF00293 NUDIX domain KM408_13020 PF09297 NADH pyrophosphatase zinc ribbon domain KM408_13025 PF02768 DNA polymerase III beta subunit, C-terminal domain KM408_13025 PF02767 DNA polymerase III beta subunit, central domain KM408_13025 PF00712 DNA polymerase III beta subunit, N-terminal domain KM408_13030 PF00293 NUDIX domain KM408_13045 PF12706 Beta-lactamase superfamily domain KM408_13065 PF09234 Domain of unknown function (DUF1963) KM408_13090 PF08000 Bacterial PH domain KM408_13100 PF12867 DinB superfamily KM408_13115 PF02673 Bacitracin resistance protein BacA KM408_13125 PF01541 GIY-YIG catalytic domain KM408_13165 PF01266 FAD dependent oxidoreductase KM408_13190 PF13419 Haloacid dehalogenase-like hydrolase KM408_13210 PF00282 Pyridoxal-dependent decarboxylase conserved domain KM408_13215 PF00550 Phosphopantetheine attachment site KM408_13215 PF00668 Condensation domain KM408_13215 PF13193 AMP-binding enzyme C-terminal domain KM408_13215 PF00501 AMP-binding enzyme KM408_13225 PF00128 Alpha amylase, catalytic domain KM408_13225 PF03714 Bacterial pullanase-associated domain KM408_13225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM408_13230 PF07504 Fungalysin/Thermolysin Propeptide Motif KM408_13230 PF03413 Peptidase propeptide and YPEB domain KM408_13230 PF01447 Thermolysin metallopeptidase, catalytic domain KM408_13230 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM408_13250 PF00344 SecY translocase KM408_13255 PF08299 Bacterial dnaA protein helix-turn-helix KM408_13255 PF00308 Bacterial dnaA protein KM408_13255 PF11638 DnaA N-terminal domain KM408_13260 PF00892 EamA-like transporter family KM408_13265 PF00155 Aminotransferase class I and II KM408_13265 PF00392 Bacterial regulatory proteins, gntR family KM408_13270 PF00561 alpha/beta hydrolase fold KM408_13295 PF06081 Aromatic acid exporter family member 1 KM408_13310 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM408_13315 PF03413 Peptidase propeptide and YPEB domain KM408_13315 PF14620 YpeB sporulation KM408_13320 PF07486 Cell Wall Hydrolase KM408_13320 PF01471 Putative peptidoglycan binding domain KM408_13335 PF03301 Tryptophan 2,3-dioxygenase KM408_13340 PF04199 Putative cyclase KM408_13345 PF00266 Aminotransferase class-V KM408_13350 PF00440 Bacterial regulatory proteins, tetR family KM408_13350 PF08359 YsiA-like protein, C-terminal region KM408_13355 PF13344 Haloacid dehalogenase-like hydrolase KM408_13355 PF00293 NUDIX domain KM408_13380 PF01590 GAF domain KM408_13380 PF00158 Sigma-54 interaction domain KM408_13380 PF02954 Bacterial regulatory protein, Fis family KM408_13395 PF13302 Acetyltransferase (GNAT) domain KM408_13400 PF08220 DeoR-like helix-turn-helix domain KM408_13400 PF00455 DeoR C terminal sensor domain KM408_13415 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_13415 PF00403 Heavy-metal-associated domain KM408_13415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM408_13420 PF02082 Transcriptional regulator KM408_13435 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_13435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM408_13440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM408_13440 PF00364 Biotin-requiring enzyme KM408_13440 PF02817 e3 binding domain KM408_13445 PF02779 Transketolase, pyrimidine binding domain KM408_13445 PF02780 Transketolase, C-terminal domain KM408_13450 PF00676 Dehydrogenase E1 component KM408_13460 PF00106 short chain dehydrogenase KM408_13465 PF13673 Acetyltransferase (GNAT) domain KM408_13465 PF04229 GrpB protein KM408_13495 PF00528 Binding-protein-dependent transport system inner membrane component KM408_13500 PF00005 ABC transporter KM408_13500 PF00571 CBS domain KM408_13505 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KM408_13510 PF00574 Clp protease KM408_13525 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KM408_13530 PF13673 Acetyltransferase (GNAT) domain KM408_13535 PF18416 N-acetylglucosamine binding protein domain 2 KM408_13535 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM408_13550 PF10990 Protein of unknown function (DUF2809) KM408_13575 PF03772 Competence protein KM408_13575 PF13567 Domain of unknown function (DUF4131) KM408_13575 PF00753 Metallo-beta-lactamase superfamily KM408_13625 PF13538 UvrD-like helicase C-terminal domain KM408_13640 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like KM408_13645 PF09382 RQC domain KM408_13645 PF00570 HRDC domain KM408_13645 PF00271 Helicase conserved C-terminal domain KM408_13645 PF16124 RecQ zinc-binding KM408_13645 PF00270 DEAD/DEAH box helicase KM408_13685 PF01368 DHH family KM408_13685 PF02833 DHHA2 domain KM408_13690 PF18416 N-acetylglucosamine binding protein domain 2 KM408_13690 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading KM408_13705 PF02627 Carboxymuconolactone decarboxylase family KM408_13710 PF01235 Sodium:alanine symporter family KM408_13715 PF00171 Aldehyde dehydrogenase family KM408_13720 PF00701 Dihydrodipicolinate synthetase family KM408_13725 PF05544 Proline racemase KM408_13730 PF05544 Proline racemase KM408_13735 PF01266 FAD dependent oxidoreductase KM408_13740 PF13188 PAS domain KM408_13740 PF02954 Bacterial regulatory protein, Fis family KM408_13740 PF00158 Sigma-54 interaction domain KM408_13755 PF04324 BFD-like [2Fe-2S] binding domain KM408_13755 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_13770 PF08876 Domain of unknown function (DUF1836) KM408_13775 PF09335 SNARE associated Golgi protein KM408_13790 PF04914 DltD protein KM408_13795 PF03352 Methyladenine glycosylase KM408_13795 PF13673 Acetyltransferase (GNAT) domain KM408_13795 PF13302 Acetyltransferase (GNAT) domain KM408_13795 PF00117 Glutamine amidotransferase class-I KM408_13795 PF00958 GMP synthase C terminal domain KM408_13800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_13805 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain KM408_13805 PF00877 NlpC/P60 family KM408_13810 PF13378 Enolase C-terminal domain-like KM408_13810 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM408_13830 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM408_13855 PF02129 X-Pro dipeptidyl-peptidase (S15 family) KM408_13855 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KM408_13860 PF16736 Single Cache-like KM408_13860 PF00989 PAS fold KM408_13860 PF00512 His Kinase A (phospho-acceptor) domain KM408_13860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_13885 PF01048 Phosphorylase superfamily KM408_13895 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM408_13900 PF08439 Oligopeptidase F KM408_13900 PF01432 Peptidase family M3 KM408_13915 PF02645 Uncharacterised protein, DegV family COG1307 KM408_13935 PF07690 Major Facilitator Superfamily KM408_13945 PF04519 Polymer-forming cytoskeletal KM408_13950 PF13171 Protein of unknown function (DUF4004) KM408_13955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_13955 PF12793 Sugar transport-related sRNA regulator N-term KM408_13960 PF07690 Major Facilitator Superfamily KM408_13980 PF04226 Transglycosylase associated protein KM408_13985 PF01156 Inosine-uridine preferring nucleoside hydrolase KM408_13995 PF08241 Methyltransferase domain KM408_14030 PF00155 Aminotransferase class I and II KM408_14035 PF07977 FabA-like domain KM408_14040 PF03630 Fumble KM408_14060 PF00005 ABC transporter KM408_14105 PF01594 AI-2E family transporter KM408_14115 PF00296 Luciferase-like monooxygenase KM408_14120 PF00528 Binding-protein-dependent transport system inner membrane component KM408_14125 PF09084 NMT1/THI5 like KM408_14130 PF00005 ABC transporter KM408_14150 PF00293 NUDIX domain KM408_14150 PF09297 NADH pyrophosphatase zinc ribbon domain KM408_14170 PF02522 Aminoglycoside 3-N-acetyltransferase KM408_14195 PF13536 Putative multidrug resistance efflux transporter KM408_14200 PF12867 DinB superfamily KM408_14220 PF08713 DNA alkylation repair enzyme KM408_14230 PF01522 Polysaccharide deacetylase KM408_14240 PF03741 Integral membrane protein TerC family KM408_14245 PF00884 Sulfatase KM408_14250 PF00005 ABC transporter KM408_14250 PF12848 ABC transporter KM408_14260 PF03176 MMPL family KM408_14265 PF03176 MMPL family KM408_14270 PF03176 MMPL family KM408_14275 PF16295 Tetracyclin repressor-like, C-terminal domain KM408_14275 PF00440 Bacterial regulatory proteins, tetR family KM408_14285 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM408_14290 PF01842 ACT domain KM408_14290 PF02153 Prephenate dehydrogenase KM408_14295 PF00155 Aminotransferase class I and II KM408_14300 PF01264 Chorismate synthase KM408_14305 PF01817 Chorismate mutase type II KM408_14305 PF00793 DAHP synthetase I family KM408_14325 PF01636 Phosphotransferase enzyme family KM408_14340 PF06725 3D domain KM408_14340 PF01476 LysM domain KM408_14350 PF08281 Sigma-70, region 4 KM408_14350 PF04542 Sigma-70 region 2 KM408_14370 PF06039 Malate:quinone oxidoreductase (Mqo) KM408_14375 PF13407 Periplasmic binding protein domain KM408_14380 PF02653 Branched-chain amino acid transport system / permease component KM408_14385 PF02653 Branched-chain amino acid transport system / permease component KM408_14390 PF00005 ABC transporter KM408_14395 PF00325 Bacterial regulatory proteins, crp family KM408_14395 PF04198 Putative sugar-binding domain KM408_14410 PF01791 DeoC/LacD family aldolase KM408_14430 PF03992 Antibiotic biosynthesis monooxygenase KM408_14450 PF01773 Na+ dependent nucleoside transporter N-terminus KM408_14450 PF07662 Na+ dependent nucleoside transporter C-terminus KM408_14455 PF00171 Aldehyde dehydrogenase family KM408_14460 PF00696 Amino acid kinase family KM408_14460 PF01472 PUA domain KM408_14465 PF03807 NADP oxidoreductase coenzyme F420-dependent KM408_14465 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM408_14470 PF01546 Peptidase family M20/M25/M40 KM408_14475 PF09339 IclR helix-turn-helix domain KM408_14475 PF01614 Bacterial transcriptional regulator KM408_14480 PF00324 Amino acid permease KM408_14485 PF01139 tRNA-splicing ligase RtcB KM408_14490 PF00487 Fatty acid desaturase KM408_14495 PF00245 Alkaline phosphatase KM408_14500 PF11188 Protein of unknown function (DUF2975) KM408_14505 PF13443 Cro/C1-type HTH DNA-binding domain KM408_14520 PF10086 YhfC intramembrane metalloprotease KM408_14530 PF04397 LytTr DNA-binding domain KM408_14530 PF00072 Response regulator receiver domain KM408_14540 PF13302 Acetyltransferase (GNAT) domain KM408_14545 PF12681 Glyoxalase-like domain KM408_14565 PF07726 ATPase family associated with various cellular activities (AAA) KM408_14565 PF17863 AAA lid domain KM408_14580 PF07690 Major Facilitator Superfamily KM408_14590 PF00535 Glycosyl transferase family 2 KM408_14605 PF00535 Glycosyl transferase family 2 KM408_14615 PF00535 Glycosyl transferase family 2 KM408_14625 PF00202 Aminotransferase class-III KM408_14630 PF00199 Catalase KM408_14630 PF06628 Catalase-related immune-responsive KM408_14640 PF01979 Amidohydrolase family KM408_14640 PF13382 Adenine deaminase C-terminal domain KM408_14645 PF00144 Beta-lactamase KM408_14665 PF17863 AAA lid domain KM408_14665 PF07726 ATPase family associated with various cellular activities (AAA) KM408_14675 PF00881 Nitroreductase family KM408_14680 PF01047 MarR family KM408_14685 PF14492 Elongation Factor G, domain II KM408_14685 PF03764 Elongation factor G, domain IV KM408_14685 PF00679 Elongation factor G C-terminus KM408_14685 PF00009 Elongation factor Tu GTP binding domain KM408_14695 PF00293 NUDIX domain KM408_14710 PF00005 ABC transporter KM408_14715 PF00392 Bacterial regulatory proteins, gntR family KM408_14725 PF00005 ABC transporter KM408_14725 PF12704 MacB-like periplasmic core domain KM408_14725 PF02687 FtsX-like permease family KM408_14750 PF12833 Helix-turn-helix domain KM408_14755 PF00583 Acetyltransferase (GNAT) family KM408_14770 PF00892 EamA-like transporter family KM408_14775 PF00155 Aminotransferase class I and II KM408_14775 PF00392 Bacterial regulatory proteins, gntR family KM408_14780 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KM408_14785 PF13031 Protein of unknown function (DUF3892) KM408_14795 PF00512 His Kinase A (phospho-acceptor) domain KM408_14795 PF00672 HAMP domain KM408_14800 PF00486 Transcriptional regulatory protein, C terminal KM408_14800 PF00072 Response regulator receiver domain KM408_14805 PF00561 alpha/beta hydrolase fold KM408_14835 PF01925 Sulfite exporter TauE/SafE KM408_14840 PF13302 Acetyltransferase (GNAT) domain KM408_14845 PF00324 Amino acid permease KM408_14855 PF08713 DNA alkylation repair enzyme KM408_14860 PF10898 Protein of unknown function (DUF2716) KM408_14880 PF00293 NUDIX domain KM408_14890 PF10502 Signal peptidase, peptidase S26 KM408_14895 PF03717 Penicillin-binding Protein dimerisation domain KM408_14895 PF00905 Penicillin binding protein transpeptidase domain KM408_14905 PF02146 Sir2 family KM408_14910 PF01470 Pyroglutamyl peptidase KM408_14930 PF03746 LamB/YcsF family KM408_14935 PF02626 Carboxyltransferase domain, subdomain A and B KM408_14940 PF02682 Carboxyltransferase domain, subdomain C and D KM408_14945 PF09339 IclR helix-turn-helix domain KM408_14945 PF01614 Bacterial transcriptional regulator KM408_14950 PF10502 Signal peptidase, peptidase S26 KM408_14955 PF03932 CutC family KM408_14960 PF07454 Stage II sporulation protein P (SpoIIP) KM408_14975 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KM408_14975 PF02770 Acyl-CoA dehydrogenase, middle domain KM408_14975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM408_14990 PF07670 Nucleoside recognition KM408_15005 PF02915 Rubrerythrin KM408_15015 PF00440 Bacterial regulatory proteins, tetR family KM408_15020 PF00391 PEP-utilising enzyme, mobile domain KM408_15020 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KM408_15025 PF00753 Metallo-beta-lactamase superfamily KM408_15040 PF07875 Coat F domain KM408_15045 PF08892 YqcI/YcgG family KM408_15050 PF01810 LysE type translocator KM408_15065 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM408_15070 PF10710 Protein of unknown function (DUF2512) KM408_15075 PF11553 Protein of unknown function (DUF3231) KM408_15080 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM408_15085 PF00107 Zinc-binding dehydrogenase KM408_15085 PF08240 Alcohol dehydrogenase GroES-like domain KM408_15085 PF13823 Alcohol dehydrogenase GroES-associated KM408_15100 PF00206 Lyase KM408_15100 PF10415 Fumarase C C-terminus KM408_15105 PF00710 Asparaginase, N-terminal KM408_15105 PF17763 Glutaminase/Asparaginase C-terminal domain KM408_15110 PF01381 Helix-turn-helix KM408_15120 PF01541 GIY-YIG catalytic domain KM408_15120 PF12826 Helix-hairpin-helix motif KM408_15120 PF02151 UvrB/uvrC motif KM408_15120 PF08459 UvrC Helix-hairpin-helix N-terminal KM408_15125 PF13520 Amino acid permease KM408_15130 PF05525 Branched-chain amino acid transport protein KM408_15135 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM408_15135 PF03807 NADP oxidoreductase coenzyme F420-dependent KM408_15140 PF13564 DoxX-like family KM408_15145 PF03949 Malic enzyme, NAD binding domain KM408_15145 PF00390 Malic enzyme, N-terminal domain KM408_15160 PF03845 Spore germination protein KM408_15170 PF08664 YcbB domain KM408_15170 PF00072 Response regulator receiver domain KM408_15180 PF04960 Glutaminase KM408_15185 PF01235 Sodium:alanine symporter family KM408_15215 PF17936 Bacterial Ig domain KM408_15215 PF00149 Calcineurin-like phosphoesterase KM408_15215 PF02872 5'-nucleotidase, C-terminal domain KM408_15220 PF06628 Catalase-related immune-responsive KM408_15220 PF00199 Catalase KM408_15225 PF00561 alpha/beta hydrolase fold KM408_15230 PF00857 Isochorismatase family KM408_15250 PF03466 LysR substrate binding domain KM408_15250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM408_15255 PF01047 MarR family KM408_15275 PF11181 Heat induced stress protein YflT KM408_15290 PF03073 TspO/MBR family KM408_15295 PF00875 DNA photolyase KM408_15295 PF03441 FAD binding domain of DNA photolyase KM408_15305 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KM408_15310 PF00361 Proton-conducting membrane transporter KM408_15310 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM408_15315 PF10057 Uncharacterized conserved protein (DUF2294) KM408_15330 PF01040 UbiA prenyltransferase family KM408_15335 PF00561 alpha/beta hydrolase fold KM408_15340 PF01297 Zinc-uptake complex component A periplasmic KM408_15345 PF00950 ABC 3 transport family KM408_15350 PF00005 ABC transporter KM408_15375 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM408_15380 PF01758 Sodium Bile acid symporter family KM408_15385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM408_15390 PF01022 Bacterial regulatory protein, arsR family KM408_15405 PF00012 Hsp70 protein KM408_15420 PF01037 Lrp/AsnC ligand binding domain KM408_15435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM408_15460 PF02805 Metal binding domain of Ada KM408_15460 PF12833 Helix-turn-helix domain KM408_15470 PF00144 Beta-lactamase KM408_15495 PF12802 MarR family KM408_15500 PF00067 Cytochrome P450 KM408_15500 PF00175 Oxidoreductase NAD-binding domain KM408_15500 PF00667 FAD binding domain KM408_15500 PF00258 Flavodoxin KM408_15505 PF07690 Major Facilitator Superfamily KM408_15530 PF00072 Response regulator receiver domain KM408_15530 PF00486 Transcriptional regulatory protein, C terminal KM408_15535 PF00672 HAMP domain KM408_15535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_15535 PF00512 His Kinase A (phospho-acceptor) domain KM408_15560 PF00291 Pyridoxal-phosphate dependent enzyme KM408_15580 PF01381 Helix-turn-helix KM408_15595 PF00753 Metallo-beta-lactamase superfamily KM408_15600 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family KM408_15610 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KM408_15610 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KM408_15615 PF04072 Leucine carboxyl methyltransferase KM408_15630 PF00005 ABC transporter KM408_15635 PF02687 FtsX-like permease family KM408_15650 PF00512 His Kinase A (phospho-acceptor) domain KM408_15650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_15650 PF00672 HAMP domain KM408_15655 PF00072 Response regulator receiver domain KM408_15655 PF00486 Transcriptional regulatory protein, C terminal KM408_15665 PF01047 MarR family KM408_15675 PF04299 Putative FMN-binding domain KM408_15680 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM408_15680 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM408_15685 PF07690 Major Facilitator Superfamily KM408_15690 PF02589 LUD domain KM408_15695 PF02589 LUD domain KM408_15695 PF13183 4Fe-4S dicluster domain KM408_15695 PF11870 Domain of unknown function (DUF3390) KM408_15700 PF02754 Cysteine-rich domain KM408_15705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM408_15705 PF03466 LysR substrate binding domain KM408_15715 PF02016 LD-carboxypeptidase N-terminal domain KM408_15715 PF17676 LD-carboxypeptidase C-terminal domain KM408_15740 PF07690 Major Facilitator Superfamily KM408_15745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM408_15745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM408_15750 PF05116 Sucrose-6F-phosphate phosphohydrolase KM408_15760 PF00356 Bacterial regulatory proteins, lacI family KM408_15765 PF18801 response regulator aspartate phosphatase H, N terminal KM408_15785 PF00817 impB/mucB/samB family KM408_15785 PF11799 impB/mucB/samB family C-terminal domain KM408_15785 PF11798 IMS family HHH motif KM408_15800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM408_15800 PF02743 Cache domain KM408_15800 PF00672 HAMP domain KM408_15815 PF01554 MatE KM408_15825 PF18496 Collagenase G catalytic helper subdomain KM408_15825 PF08453 Peptidase family M9 N-terminal KM408_15825 PF01752 Collagenase KM408_15835 PF07690 Major Facilitator Superfamily KM408_15840 PF00440 Bacterial regulatory proteins, tetR family KM408_15840 PF16859 Tetracyclin repressor-like, C-terminal domain KM408_15850 PF01022 Bacterial regulatory protein, arsR family KM408_15860 PF03313 Serine dehydratase alpha chain KM408_15865 PF01842 ACT domain KM408_15865 PF03315 Serine dehydratase beta chain KM408_15875 PF00202 Aminotransferase class-III KM408_15880 PF01300 Telomere recombination KM408_15880 PF17788 HypF Kae1-like domain KM408_15880 PF00708 Acylphosphatase KM408_15880 PF07503 HypF finger KM408_15885 PF00586 AIR synthase related protein, N-terminal domain KM408_15885 PF02769 AIR synthase related protein, C-terminal domain KM408_15890 PF00857 Isochorismatase family KM408_15895 PF01037 Lrp/AsnC ligand binding domain KM408_15900 PF13520 Amino acid permease KM408_15915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM408_15915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM408_15915 PF01842 ACT domain KM408_15920 PF00266 Aminotransferase class-V KM408_15935 PF08281 Sigma-70, region 4 KM408_15935 PF04542 Sigma-70 region 2 KM408_15950 PF07883 Cupin domain KM408_15955 PF01497 Periplasmic binding protein KM408_15955 PF12833 Helix-turn-helix domain KM408_15960 PF01804 Penicillin amidase KM408_16000 PF14044 NETI protein KM408_16005 PF07690 Major Facilitator Superfamily KM408_16010 PF12697 Alpha/beta hydrolase family KM408_16015 PF01047 MarR family KM408_16020 PF07690 Major Facilitator Superfamily KM408_16030 PF12679 ABC-2 family transporter protein KM408_16035 PF00005 ABC transporter KM408_16035 PF13732 Domain of unknown function (DUF4162) KM408_16040 PF13396 Phospholipase_D-nuclease N-terminal KM408_16050 PF17314 Family of unknown function (DUF5360) KM408_16055 PF00893 Small Multidrug Resistance protein KM408_16060 PF00440 Bacterial regulatory proteins, tetR family KM408_16065 PF01289 Thiol-activated cytolysin KM408_16065 PF17440 Thiol-activated cytolysin beta sandwich domain KM408_16070 PF02667 Short chain fatty acid transporter KM408_16080 PF02525 Flavodoxin-like fold KM408_16100 PF14256 YwiC-like protein KM408_16110 PF00005 ABC transporter KM408_16115 PF02361 Cobalt transport protein KM408_16130 PF03737 Aldolase/RraA KM408_16135 PF03606 C4-dicarboxylate anaerobic carrier KM408_16140 PF04231 Endonuclease I KM408_16155 PF01381 Helix-turn-helix KM408_16160 PF02660 Glycerol-3-phosphate acyltransferase KM408_16165 PF04073 Aminoacyl-tRNA editing domain KM408_16170 PF13393 Histidyl-tRNA synthetase KM408_16170 PF03129 Anticodon binding domain KM408_16185 PF01638 HxlR-like helix-turn-helix KM408_16190 PF00881 Nitroreductase family KM408_16200 PF00391 PEP-utilising enzyme, mobile domain KM408_16200 PF00224 Pyruvate kinase, barrel domain KM408_16200 PF02887 Pyruvate kinase, alpha/beta domain KM408_16220 PF00005 ABC transporter KM408_16245 PF13419 Haloacid dehalogenase-like hydrolase KM408_16255 PF13350 Tyrosine phosphatase family KM408_16280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM408_16285 PF00480 ROK family KM408_16290 PF07690 Major Facilitator Superfamily KM408_16295 PF12464 Maltose acetyltransferase KM408_16295 PF14602 Hexapeptide repeat of succinyl-transferase KM408_16305 PF02687 FtsX-like permease family KM408_16305 PF12704 MacB-like periplasmic core domain KM408_16305 PF00005 ABC transporter KM408_16315 PF00579 tRNA synthetases class I (W and Y) KM408_16325 PF01594 AI-2E family transporter KM408_16345 PF08241 Methyltransferase domain KM408_16355 PF07690 Major Facilitator Superfamily KM408_16375 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM408_16385 PF03471 Transporter associated domain KM408_16385 PF00571 CBS domain KM408_16385 PF01595 Cyclin M transmembrane N-terminal domain KM408_16390 PF13411 MerR HTH family regulatory protein KM408_16395 PF00892 EamA-like transporter family KM408_16400 PF00805 Pentapeptide repeats (8 copies) KM408_16405 PF06906 Protein of unknown function (DUF1272) KM408_16410 PF10282 Lactonase, 7-bladed beta-propeller KM408_16415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KM408_16415 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KM408_16420 PF02447 GntP family permease KM408_16425 PF00923 Transaldolase/Fructose-6-phosphate aldolase KM408_16430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KM408_16430 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KM408_16435 PF02780 Transketolase, C-terminal domain KM408_16435 PF02779 Transketolase, pyrimidine binding domain KM408_16435 PF00456 Transketolase, thiamine diphosphate binding domain KM408_16440 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM408_16440 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM408_16445 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KM408_16445 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KM408_16450 PF08240 Alcohol dehydrogenase GroES-like domain KM408_16450 PF00107 Zinc-binding dehydrogenase KM408_16455 PF00296 Luciferase-like monooxygenase KM408_16465 PF00698 Acyl transferase domain KM408_16465 PF16197 Ketoacyl-synthetase C-terminal extension KM408_16465 PF02801 Beta-ketoacyl synthase, C-terminal domain KM408_16465 PF00109 Beta-ketoacyl synthase, N-terminal domain KM408_16465 PF08240 Alcohol dehydrogenase GroES-like domain KM408_16465 PF14765 Polyketide synthase dehydratase KM408_16465 PF08659 KR domain KM408_16465 PF00550 Phosphopantetheine attachment site KM408_16470 PF00106 short chain dehydrogenase KM408_16475 PF07504 Fungalysin/Thermolysin Propeptide Motif KM408_16475 PF01447 Thermolysin metallopeptidase, catalytic domain KM408_16475 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM408_16475 PF03413 Peptidase propeptide and YPEB domain KM408_16495 PF00248 Aldo/keto reductase family KM408_16500 PF07690 Major Facilitator Superfamily KM408_16510 PF03928 Haem-degrading KM408_16515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM408_16545 PF03960 ArsC family KM408_16550 PF01638 HxlR-like helix-turn-helix KM408_16555 PF07702 UTRA domain KM408_16555 PF00392 Bacterial regulatory proteins, gntR family KM408_16570 PF01638 HxlR-like helix-turn-helix KM408_16575 PF01638 HxlR-like helix-turn-helix KM408_16580 PF00248 Aldo/keto reductase family KM408_16610 PF02567 Phenazine biosynthesis-like protein KM408_16630 PF00501 AMP-binding enzyme KM408_16630 PF13193 AMP-binding enzyme C-terminal domain KM408_16640 PF01638 HxlR-like helix-turn-helix KM408_16660 PF01022 Bacterial regulatory protein, arsR family KM408_16670 PF12791 Anti-sigma factor N-terminus KM408_16675 PF04542 Sigma-70 region 2 KM408_16690 PF00440 Bacterial regulatory proteins, tetR family KM408_16710 PF05656 Protein of unknown function (DUF805) KM408_16715 PF01061 ABC-2 type transporter KM408_16720 PF00005 ABC transporter KM408_16720 PF13732 Domain of unknown function (DUF4162) KM408_16735 PF03063 Prismane/CO dehydrogenase family KM408_16745 PF00753 Metallo-beta-lactamase superfamily KM408_16750 PF01183 Glycosyl hydrolases family 25 KM408_16750 PF01471 Putative peptidoglycan binding domain KM408_16775 PF00144 Beta-lactamase KM408_16815 PF00753 Metallo-beta-lactamase superfamily KM408_16820 PF08240 Alcohol dehydrogenase GroES-like domain KM408_16820 PF00107 Zinc-binding dehydrogenase KM408_16825 PF00324 Amino acid permease KM408_16830 PF07690 Major Facilitator Superfamily KM408_16855 PF02585 GlcNAc-PI de-N-acetylase KM408_16860 PF08830 Protein of unknown function (DUF1806) KM408_16865 PF03600 Citrate transporter KM408_16885 PF01497 Periplasmic binding protein KM408_16890 PF01032 FecCD transport family KM408_16895 PF01032 FecCD transport family KM408_16900 PF05675 Protein of unknown function (DUF817) KM408_16905 PF02567 Phenazine biosynthesis-like protein KM408_16910 PF13170 Protein of unknown function (DUF4003) KM408_16925 PF10901 Protein of unknown function (DUF2690) KM408_16935 PF03466 LysR substrate binding domain KM408_16935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM408_16940 PF08240 Alcohol dehydrogenase GroES-like domain KM408_16940 PF00107 Zinc-binding dehydrogenase KM408_16955 PF00488 MutS domain V KM408_16955 PF01713 Smr domain KM408_16965 PF00128 Alpha amylase, catalytic domain KM408_16965 PF09154 Domain of unknown function (DUF1939) KM408_16980 PF00144 Beta-lactamase KM408_16990 PF07690 Major Facilitator Superfamily KM408_16995 PF03466 LysR substrate binding domain KM408_16995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM408_17010 PF03009 Glycerophosphoryl diester phosphodiesterase family KM408_17030 PF01494 FAD binding domain KM408_17035 PF01022 Bacterial regulatory protein, arsR family KM408_17040 PF00107 Zinc-binding dehydrogenase KM408_17040 PF08240 Alcohol dehydrogenase GroES-like domain KM408_17045 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KM408_17060 PF04299 Putative FMN-binding domain KM408_17065 PF04229 GrpB protein KM408_17075 PF01758 Sodium Bile acid symporter family KM408_17080 PF01565 FAD binding domain KM408_17080 PF02913 FAD linked oxidases, C-terminal domain KM408_17100 PF00132 Bacterial transferase hexapeptide (six repeats) KM408_17105 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KM408_17110 PF00535 Glycosyl transferase family 2 KM408_17115 PF00378 Enoyl-CoA hydratase/isomerase KM408_17120 PF18496 Collagenase G catalytic helper subdomain KM408_17120 PF08453 Peptidase family M9 N-terminal KM408_17120 PF01752 Collagenase KM408_17125 PF02308 MgtC family KM408_17140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM408_17145 PF04294 VanW like protein KM408_17155 PF13037 Domain of unknown function (DUF3898) KM408_17155 PF13039 Protein of unknown function (DUF3900) KM408_17175 PF00313 'Cold-shock' DNA-binding domain KM408_17185 PF00258 Flavodoxin KM408_17195 PF00293 NUDIX domain KM408_17205 PF00132 Bacterial transferase hexapeptide (six repeats) KM408_17215 PF00106 short chain dehydrogenase KM408_17225 PF00206 Lyase KM408_17225 PF14698 Argininosuccinate lyase C-terminal KM408_17235 PF01156 Inosine-uridine preferring nucleoside hydrolase KM408_17240 PF00474 Sodium:solute symporter family KM408_17250 PF00171 Aldehyde dehydrogenase family KM408_17260 PF14151 YfhD-like protein KM408_17265 PF13243 Squalene-hopene cyclase C-terminal domain KM408_17265 PF13249 Squalene-hopene cyclase N-terminal domain KM408_17270 PF02681 Divergent PAP2 family KM408_17275 PF00892 EamA-like transporter family KM408_17280 PF06961 Protein of unknown function (DUF1294) KM408_17295 PF10609 NUBPL iron-transfer P-loop NTPase KM408_17305 PF02391 MoaE protein KM408_17310 PF03454 MoeA C-terminal region (domain IV) KM408_17310 PF00994 Probable molybdopterin binding domain KM408_17310 PF03453 MoeA N-terminal region (domain I and II) KM408_17315 PF00899 ThiF family KM408_17320 PF01226 Formate/nitrite transporter KM408_17325 PF04055 Radical SAM superfamily KM408_17325 PF06463 Molybdenum Cofactor Synthesis C KM408_17330 PF02634 FdhD/NarQ family KM408_17335 PF10057 Uncharacterized conserved protein (DUF2294) KM408_17340 PF07849 Protein of unknown function (DUF1641) KM408_17345 PF00037 4Fe-4S binding domain KM408_17345 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KM408_17345 PF00384 Molybdopterin oxidoreductase KM408_17345 PF01568 Molydopterin dinucleotide binding domain KM408_17345 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KM408_17355 PF03323 Bacillus/Clostridium GerA spore germination protein KM408_17395 PF08241 Methyltransferase domain KM408_17400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_17405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_17410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_17415 PF00375 Sodium:dicarboxylate symporter family KM408_17420 PF03816 Cell envelope-related transcriptional attenuator domain KM408_17430 PF08281 Sigma-70, region 4 KM408_17430 PF04542 Sigma-70 region 2 KM408_17450 PF13732 Domain of unknown function (DUF4162) KM408_17450 PF00005 ABC transporter KM408_17460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KM408_17460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM408_17465 PF03989 DNA gyrase C-terminal domain, beta-propeller KM408_17465 PF00521 DNA gyrase/topoisomerase IV, subunit A KM408_17470 PF01751 Toprim domain KM408_17470 PF00204 DNA gyrase B KM408_17470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_17470 PF00986 DNA gyrase B subunit, carboxyl terminus KM408_17475 PF13380 CoA binding domain KM408_17480 PF13180 PDZ domain KM408_17485 PF00486 Transcriptional regulatory protein, C terminal KM408_17485 PF00072 Response regulator receiver domain KM408_17495 PF13597 Anaerobic ribonucleoside-triphosphate reductase KM408_17495 PF03477 ATP cone domain KM408_17500 PF02660 Glycerol-3-phosphate acyltransferase KM408_17505 PF01521 Iron-sulphur cluster biosynthesis KM408_17510 PF03061 Thioesterase superfamily KM408_17515 PF00704 Glycosyl hydrolases family 18 KM408_17515 PF01476 LysM domain KM408_17525 PF08177 Small acid-soluble spore protein N family KM408_17530 PF13040 Fur-regulated basic protein B KM408_17535 PF11490 DNA polymerase III polC-type N-terminus II KM408_17535 PF01336 OB-fold nucleic acid binding domain KM408_17535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM408_17535 PF14579 Helix-hairpin-helix motif KM408_17535 PF02811 PHP domain KM408_17535 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM408_17535 PF00929 Exonuclease KM408_17540 PF00578 AhpC/TSA family KM408_17550 PF03412 Peptidase C39 family KM408_17550 PF00005 ABC transporter KM408_17550 PF00664 ABC transporter transmembrane region KM408_17555 PF00330 Aconitase family (aconitate hydratase) KM408_17555 PF00694 Aconitase C-terminal domain KM408_17565 PF01522 Polysaccharide deacetylase KM408_17595 PF01411 tRNA synthetases class II (A) KM408_17595 PF02272 DHHA1 domain KM408_17595 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM408_17600 PF00293 NUDIX domain KM408_17600 PF13344 Haloacid dehalogenase-like hydrolase KM408_17610 PF02803 Thiolase, C-terminal domain KM408_17610 PF00108 Thiolase, N-terminal domain KM408_17615 PF00501 AMP-binding enzyme KM408_17615 PF13193 AMP-binding enzyme C-terminal domain KM408_17620 PF02632 BioY family KM408_17625 PF00501 AMP-binding enzyme KM408_17625 PF13193 AMP-binding enzyme C-terminal domain KM408_17645 PF05532 CsbD-like KM408_17675 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM408_17675 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM408_17685 PF13426 PAS domain KM408_17685 PF00512 His Kinase A (phospho-acceptor) domain KM408_17685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_17685 PF13188 PAS domain KM408_17685 PF00989 PAS fold KM408_17690 PF01738 Dienelactone hydrolase family KM408_17695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM408_17700 PF00474 Sodium:solute symporter family KM408_17705 PF01645 Conserved region in glutamate synthase KM408_17710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KM408_17715 PF02559 CarD-like/TRCF domain KM408_17720 PF00491 Arginase family KM408_17725 PF01979 Amidohydrolase family KM408_17730 PF01175 Urocanase Rossmann-like domain KM408_17730 PF17392 Urocanase C-terminal domain KM408_17730 PF17391 Urocanase N-terminal domain KM408_17735 PF00221 Aromatic amino acid lyase KM408_17740 PF09021 HutP KM408_17745 PF01209 ubiE/COQ5 methyltransferase family KM408_17765 PF11084 Protein of unknown function (DUF2621) KM408_17800 PF07301 Protein of unknown function (DUF1453) KM408_17805 PF02683 Cytochrome C biogenesis protein transmembrane region KM408_17815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM408_17815 PF03466 LysR substrate binding domain KM408_17820 PF03788 LrgA family KM408_17825 PF04172 LrgB-like family KM408_17830 PF00293 NUDIX domain KM408_17830 PF13344 Haloacid dehalogenase-like hydrolase KM408_17850 PF01510 N-acetylmuramoyl-L-alanine amidase KM408_17850 PF01471 Putative peptidoglycan binding domain KM408_17865 PF00005 ABC transporter KM408_17865 PF00664 ABC transporter transmembrane region KM408_17870 PF00005 ABC transporter KM408_17870 PF00664 ABC transporter transmembrane region KM408_17875 PF03672 Uncharacterised protein family (UPF0154) KM408_17880 PF10747 Sporulation inhibitor of replication protein SirA KM408_17885 PF00456 Transketolase, thiamine diphosphate binding domain KM408_17885 PF02780 Transketolase, C-terminal domain KM408_17885 PF02779 Transketolase, pyrimidine binding domain KM408_17890 PF07282 Putative transposase DNA-binding domain KM408_17890 PF01385 Probable transposase KM408_17890 PF12323 Helix-turn-helix domain KM408_17895 PF00528 Binding-protein-dependent transport system inner membrane component KM408_17900 PF00528 Binding-protein-dependent transport system inner membrane component KM408_17905 PF00005 ABC transporter KM408_17920 PF05979 Bacterial protein of unknown function (DUF896) KM408_17925 PF00239 Resolvase, N terminal domain KM408_17930 PF01726 LexA DNA binding domain KM408_17930 PF00717 Peptidase S24-like KM408_17945 PF03551 Transcriptional regulator PadR-like family KM408_17980 PF01510 N-acetylmuramoyl-L-alanine amidase KM408_17980 PF01476 LysM domain KM408_17980 PF01471 Putative peptidoglycan binding domain KM408_17985 PF05105 Bacteriophage holin family KM408_18140 PF08281 Sigma-70, region 4 KM408_18185 PF02511 Thymidylate synthase complementing protein KM408_18190 PF00145 C-5 cytosine-specific DNA methylase KM408_18270 PF01381 Helix-turn-helix KM408_18290 PF02899 Phage integrase, N-terminal SAM-like domain KM408_18290 PF00589 Phage integrase family KM408_18295 PF00120 Glutamine synthetase, catalytic domain KM408_18295 PF03951 Glutamine synthetase, beta-Grasp domain KM408_18300 PF13411 MerR HTH family regulatory protein KM408_18305 PF06838 Methionine gamma-lyase KM408_18315 PF03458 UPF0126 domain KM408_18325 PF00004 ATPase family associated with various cellular activities (AAA) KM408_18325 PF17866 AAA lid domain KM408_18340 PF17209 Hfq protein KM408_18355 PF01476 LysM domain KM408_18355 PF06725 3D domain KM408_18360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM408_18360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KM408_18365 PF00294 pfkB family carbohydrate kinase KM408_18370 PF00455 DeoR C terminal sensor domain KM408_18370 PF08220 DeoR-like helix-turn-helix domain KM408_18380 PF04238 Protein of unknown function (DUF420) KM408_18390 PF00324 Amino acid permease KM408_18395 PF00041 Fibronectin type III domain KM408_18395 PF00704 Glycosyl hydrolases family 18 KM408_18405 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM408_18405 PF00149 Calcineurin-like phosphoesterase KM408_18410 PF01226 Formate/nitrite transporter KM408_18415 PF00216 Bacterial DNA-binding protein KM408_18420 PF00403 Heavy-metal-associated domain KM408_18425 PF00403 Heavy-metal-associated domain KM408_18430 PF02583 Metal-sensitive transcriptional repressor KM408_18440 PF00756 Putative esterase KM408_18445 PF00005 ABC transporter KM408_18450 PF01032 FecCD transport family KM408_18455 PF01032 FecCD transport family KM408_18465 PF03372 Endonuclease/Exonuclease/phosphatase family KM408_18470 PF12833 Helix-turn-helix domain KM408_18470 PF02805 Metal binding domain of Ada KM408_18475 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KM408_18475 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KM408_18480 PF00730 HhH-GPD superfamily base excision DNA repair protein KM408_18480 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain KM408_18485 PF07687 Peptidase dimerisation domain KM408_18485 PF01546 Peptidase family M20/M25/M40 KM408_18505 PF00561 alpha/beta hydrolase fold KM408_18510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM408_18515 PF00563 EAL domain KM408_18515 PF00990 Diguanylate cyclase, GGDEF domain KM408_18515 PF03707 Bacterial signalling protein N terminal repeat KM408_18525 PF10787 Uncharacterised protein from bacillus cereus group KM408_18530 PF04172 LrgB-like family KM408_18535 PF03788 LrgA family KM408_18540 PF00155 Aminotransferase class I and II KM408_18540 PF00392 Bacterial regulatory proteins, gntR family KM408_18545 PF00561 alpha/beta hydrolase fold KM408_18545 PF00364 Biotin-requiring enzyme KM408_18550 PF02585 GlcNAc-PI de-N-acetylase KM408_18565 PF00388 Phosphatidylinositol-specific phospholipase C, X domain KM408_18570 PF00082 Subtilase family KM408_18575 PF07486 Cell Wall Hydrolase KM408_18580 PF03275 UDP-galactopyranose mutase KM408_18585 PF00884 Sulfatase KM408_18590 PF00350 Dynamin family KM408_18600 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KM408_18605 PF00512 His Kinase A (phospho-acceptor) domain KM408_18605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_18610 PF00486 Transcriptional regulatory protein, C terminal KM408_18610 PF00072 Response regulator receiver domain KM408_18625 PF00005 ABC transporter KM408_18630 PF01119 DNA mismatch repair protein, C-terminal domain KM408_18630 PF08676 MutL C terminal dimerisation domain KM408_18635 PF05188 MutS domain II KM408_18635 PF01624 MutS domain I KM408_18635 PF05190 MutS family domain IV KM408_18635 PF05192 MutS domain III KM408_18635 PF00488 MutS domain V KM408_18640 PF10628 Outer spore coat protein E (CotE) KM408_18645 PF06133 Control of competence regulator ComK, YlbF/YmcA KM408_18650 PF04055 Radical SAM superfamily KM408_18650 PF01938 TRAM domain KM408_18650 PF00919 Uncharacterized protein family UPF0004 KM408_18655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM408_18660 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KM408_18660 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KM408_18660 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KM408_18665 PF01244 Membrane dipeptidase (Peptidase family M19) KM408_18670 PF04232 Stage V sporulation protein S (SpoVS) KM408_18675 PF13277 YmdB-like protein KM408_18680 PF12072 Domain of unknown function (DUF3552) KM408_18680 PF01966 HD domain KM408_18680 PF00013 KH domain KM408_18685 PF00154 recA bacterial DNA recombination protein KM408_18695 PF02464 Competence-damaged protein KM408_18695 PF00994 Probable molybdopterin binding domain KM408_18695 PF18146 Damage-inducible protein CinA KH domain KM408_18700 PF01066 CDP-alcohol phosphatidyltransferase KM408_18705 PF13464 Domain of unknown function (DUF4115) KM408_18710 PF11868 Protein of unknown function (DUF3388) KM408_18715 PF11588 Protein of unknown function (DUF3243) KM408_18725 PF00675 Insulinase (Peptidase family M16) KM408_18725 PF05193 Peptidase M16 inactive domain KM408_18730 PF05193 Peptidase M16 inactive domain KM408_18735 PF02653 Branched-chain amino acid transport system / permease component KM408_18745 PF00005 ABC transporter KM408_18750 PF02608 ABC transporter substrate-binding protein PnrA-like KM408_18755 PF00392 Bacterial regulatory proteins, gntR family KM408_18755 PF07702 UTRA domain KM408_18760 PF01580 FtsK/SpoIIIE family KM408_18760 PF17854 FtsK alpha domain KM408_18760 PF09397 Ftsk gamma domain KM408_18765 PF14035 YlzJ-like protein KM408_18770 PF00574 Clp protease KM408_18775 PF17770 Ribonuclease J C-terminal domain KM408_18775 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM408_18775 PF00753 Metallo-beta-lactamase superfamily KM408_18780 PF00701 Dihydrodipicolinate synthetase family KM408_18785 PF00696 Amino acid kinase family KM408_18785 PF13840 ACT domain KM408_18790 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM408_18790 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM408_18795 PF02441 Flavoprotein KM408_18800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM408_18800 PF16924 Dipicolinate synthase subunit A N-terminal domain KM408_18805 PF05239 PRC-barrel domain KM408_18810 PF00675 Insulinase (Peptidase family M16) KM408_18810 PF05193 Peptidase M16 inactive domain KM408_18815 PF01522 Polysaccharide deacetylase KM408_18820 PF00575 S1 RNA binding domain KM408_18820 PF03725 3' exoribonuclease family, domain 2 KM408_18820 PF01138 3' exoribonuclease family, domain 1 KM408_18820 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KM408_18820 PF00013 KH domain KM408_18825 PF00312 Ribosomal protein S15 KM408_18830 PF01687 Riboflavin kinase KM408_18830 PF06574 FAD synthetase KM408_18835 PF16198 tRNA pseudouridylate synthase B C-terminal domain KM408_18835 PF01509 TruB family pseudouridylate synthase (N terminal domain) KM408_18840 PF02033 Ribosome-binding factor A KM408_18845 PF04456 Protein of unknown function (DUF503) KM408_18850 PF00009 Elongation factor Tu GTP binding domain KM408_18850 PF11987 Translation-initiation factor 2 KM408_18850 PF04760 Translation initiation factor IF-2, N-terminal region KM408_18855 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KM408_18860 PF04296 Protein of unknown function (DUF448) KM408_18865 PF13184 NusA-like KH domain KM408_18865 PF08529 NusA N-terminal domain KM408_18865 PF00575 S1 RNA binding domain KM408_18870 PF02576 RimP N-terminal domain KM408_18870 PF17384 RimP C-terminal SH3 domain KM408_18875 PF02811 PHP domain KM408_18875 PF14480 DNA polymerase III polC-type N-terminus I KM408_18875 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM408_18875 PF14579 Helix-hairpin-helix motif KM408_18875 PF11490 DNA polymerase III polC-type N-terminus II KM408_18875 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM408_18875 PF00929 Exonuclease KM408_18880 PF03129 Anticodon binding domain KM408_18880 PF04073 Aminoacyl-tRNA editing domain KM408_18880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM408_18885 PF02163 Peptidase family M50 KM408_18885 PF17820 PDZ domain KM408_18890 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KM408_18890 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KM408_18890 PF13288 DXP reductoisomerase C-terminal domain KM408_18900 PF01255 Putative undecaprenyl diphosphate synthase KM408_18905 PF01765 Ribosome recycling factor KM408_18910 PF00696 Amino acid kinase family KM408_18915 PF00889 Elongation factor TS KM408_18920 PF00318 Ribosomal protein S2 KM408_18925 PF08222 CodY helix-turn-helix domain KM408_18925 PF06018 CodY GAF-like domain KM408_18930 PF10431 C-terminal, D2-small domain, of ClpB protein KM408_18930 PF07724 AAA domain (Cdc48 subfamily) KM408_18930 PF00004 ATPase family associated with various cellular activities (AAA) KM408_18935 PF00227 Proteasome subunit KM408_18940 PF00589 Phage integrase family KM408_18940 PF02899 Phage integrase, N-terminal SAM-like domain KM408_18945 PF01134 Glucose inhibited division protein A KM408_18950 PF01131 DNA topoisomerase KM408_18950 PF01396 Topoisomerase DNA binding C4 zinc finger KM408_18950 PF01751 Toprim domain KM408_18960 PF00549 CoA-ligase KM408_18960 PF02629 CoA binding domain KM408_18965 PF00549 CoA-ligase KM408_18965 PF08442 ATP-grasp domain KM408_18970 PF01351 Ribonuclease HII KM408_18975 PF01926 50S ribosome-binding GTPase KM408_18980 PF10502 Signal peptidase, peptidase S26 KM408_18985 PF01245 Ribosomal protein L19 KM408_18990 PF01746 tRNA (Guanine-1)-methyltransferase KM408_18995 PF05239 PRC-barrel domain KM408_18995 PF01782 RimM N-terminal domain KM408_19005 PF00886 Ribosomal protein S16 KM408_19010 PF00448 SRP54-type protein, GTPase domain KM408_19010 PF02881 SRP54-type protein, helical bundle domain KM408_19010 PF02978 Signal peptide binding domain KM408_19015 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KM408_19020 PF00448 SRP54-type protein, GTPase domain KM408_19020 PF02881 SRP54-type protein, helical bundle domain KM408_19025 PF06470 SMC proteins Flexible Hinge Domain KM408_19025 PF02463 RecF/RecN/SMC N terminal domain KM408_19030 PF14622 Ribonuclease-III-like KM408_19030 PF00035 Double-stranded RNA binding motif KM408_19035 PF00550 Phosphopantetheine attachment site KM408_19045 PF00698 Acyl transferase domain KM408_19050 PF02504 Fatty acid synthesis protein KM408_19055 PF03061 Thioesterase superfamily KM408_19060 PF00270 DEAD/DEAH box helicase KM408_19060 PF00271 Helicase conserved C-terminal domain KM408_19060 PF17191 RecG wedge domain KM408_19065 PF13684 Dihydroxyacetone kinase family KM408_19065 PF02734 DAK2 domain KM408_19070 PF03780 Asp23 family, cell envelope-related function KM408_19075 PF00830 Ribosomal L28 family KM408_19080 PF08183 Stage V sporulation protein family KM408_19085 PF04263 Thiamin pyrophosphokinase, catalytic domain KM408_19085 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KM408_19090 PF00834 Ribulose-phosphate 3 epimerase family KM408_19095 PF03193 RsgA GTPase KM408_19095 PF16745 RsgA N-terminal domain KM408_19100 PF00069 Protein kinase domain KM408_19100 PF03793 PASTA domain KM408_19110 PF04055 Radical SAM superfamily KM408_19115 PF01029 NusB family KM408_19115 PF01189 16S rRNA methyltransferase RsmB/F KM408_19120 PF00551 Formyl transferase KM408_19120 PF02911 Formyl transferase, C-terminal domain KM408_19125 PF01327 Polypeptide deformylase KM408_19130 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KM408_19130 PF18074 Primosomal protein N C-terminal domain KM408_19130 PF17764 3′ DNA-binding domain (3′BD) KM408_19130 PF00271 Helicase conserved C-terminal domain KM408_19130 PF04851 Type III restriction enzyme, res subunit KM408_19135 PF04127 DNA / pantothenate metabolism flavoprotein KM408_19135 PF02441 Flavoprotein KM408_19140 PF01192 RNA polymerase Rpb6 KM408_19145 PF00625 Guanylate kinase KM408_19150 PF04025 Domain of unknown function (DUF370) KM408_19155 PF08340 Domain of unknown function (DUF1732) KM408_19155 PF03755 YicC-like family, N-terminal region KM408_19160 PF00689 Cation transporting ATPase, C-terminus KM408_19160 PF00690 Cation transporter/ATPase, N-terminus KM408_19165 PF05670 NFACT protein RNA binding domain KM408_19170 PF00557 Metallopeptidase family M24 KM408_19170 PF01321 Creatinase/Prolidase N-terminal domain KM408_19200 PF00156 Phosphoribosyl transferase domain KM408_19205 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KM408_19210 PF01180 Dihydroorotate dehydrogenase KM408_19215 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KM408_19215 PF00175 Oxidoreductase NAD-binding domain KM408_19220 PF02142 MGS-like domain KM408_19220 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KM408_19220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM408_19225 PF00117 Glutamine amidotransferase class-I KM408_19225 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KM408_19230 PF01979 Amidohydrolase family KM408_19235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM408_19235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM408_19240 PF00860 Permease family KM408_19245 PF00156 Phosphoribosyl transferase domain KM408_19250 PF00849 RNA pseudouridylate synthase KM408_19250 PF01479 S4 domain KM408_19255 PF01252 Signal peptidase (SPase) II KM408_19265 PF00133 tRNA synthetases class I (I, L, M and V) KM408_19265 PF06827 Zinc finger found in FPG and IleRS KM408_19265 PF08264 Anticodon-binding domain of tRNA KM408_19270 PF05103 DivIVA protein KM408_19275 PF01479 S4 domain KM408_19275 PF17774 Putative RNA-binding domain in YlmH KM408_19280 PF02325 YGGT family KM408_19285 PF04472 Cell division protein SepF KM408_19290 PF01168 Alanine racemase, N-terminal domain KM408_19295 PF02578 Multi-copper polyphenol oxidoreductase laccase KM408_19300 PF05239 PRC-barrel domain KM408_19305 PF04545 Sigma-70, region 4 KM408_19305 PF04539 Sigma-70 region 3 KM408_19305 PF04542 Sigma-70 region 2 KM408_19310 PF04545 Sigma-70, region 4 KM408_19310 PF04542 Sigma-70 region 2 KM408_19315 PF03419 Sporulation factor SpoIIGA KM408_19320 PF12327 FtsZ family, C-terminal domain KM408_19320 PF00091 Tubulin/FtsZ family, GTPase domain KM408_19325 PF02491 SHS2 domain inserted in FTSA KM408_19330 PF03799 Cell division protein FtsQ KM408_19330 PF08478 POTRA domain, FtsQ-type KM408_19335 PF01565 FAD binding domain KM408_19335 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM408_19340 PF04101 Glycosyltransferase family 28 C-terminal domain KM408_19340 PF03033 Glycosyltransferase family 28 N-terminal domain KM408_19345 PF01098 Cell cycle protein KM408_19350 PF02875 Mur ligase family, glutamate ligase domain KM408_19350 PF08245 Mur ligase middle domain KM408_19355 PF00953 Glycosyl transferase family 4 KM408_19355 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KM408_19360 PF01225 Mur ligase family, catalytic domain KM408_19360 PF08245 Mur ligase middle domain KM408_19360 PF02875 Mur ligase family, glutamate ligase domain KM408_19365 PF03793 PASTA domain KM408_19365 PF03717 Penicillin-binding Protein dimerisation domain KM408_19365 PF00905 Penicillin binding protein transpeptidase domain KM408_19370 PF00905 Penicillin binding protein transpeptidase domain KM408_19370 PF03717 Penicillin-binding Protein dimerisation domain KM408_19370 PF03793 PASTA domain KM408_19375 PF04977 Septum formation initiator KM408_19380 PF01795 MraW methylase family KM408_19385 PF10079 Bacillithiol biosynthesis BshC KM408_19390 PF02558 Ketopantoate reductase PanE/ApbA KM408_19390 PF08546 Ketopantoate reductase PanE/ApbA C terminal KM408_19395 PF00583 Acetyltransferase (GNAT) family KM408_19405 PF01783 Ribosomal L32p protein family KM408_19410 PF02620 Large ribosomal RNA subunit accumulation protein YceD KM408_19455 PF01510 N-acetylmuramoyl-L-alanine amidase KM408_19455 PF12123 N-acetylmuramoyl-l-alanine amidase KM408_19460 PF05105 Bacteriophage holin family KM408_19535 PF00574 Clp protease KM408_19545 PF03354 Phage Terminase KM408_19565 PF10137 Predicted nucleotide-binding protein containing TIR-like domain KM408_19570 PF00589 Phage integrase family KM408_19620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM408_19635 PF00692 dUTPase KM408_19650 PF04542 Sigma-70 region 2 KM408_19650 PF04539 Sigma-70 region 3 KM408_19650 PF04545 Sigma-70, region 4 KM408_19675 PF07319 Primosomal protein DnaI N-terminus KM408_19675 PF01695 IstB-like ATP binding protein KM408_19705 PF01381 Helix-turn-helix KM408_19720 PF01381 Helix-turn-helix KM408_19735 PF14659 Phage integrase, N-terminal SAM-like domain KM408_19735 PF00589 Phage integrase family KM408_19740 PF05636 HIGH Nucleotidyl Transferase KM408_19745 PF05362 Lon protease (S16) C-terminal proteolytic domain KM408_19745 PF13180 PDZ domain KM408_19750 PF01734 Patatin-like phospholipase KM408_19755 PF07670 Nucleoside recognition KM408_19760 PF01467 Cytidylyltransferase-like KM408_19775 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KM408_19780 PF06133 Control of competence regulator ComK, YlbF/YmcA KM408_19785 PF00300 Histidine phosphatase superfamily (branch 1) KM408_19790 PF14003 YlbE-like protein KM408_19795 PF14071 Putative coat protein KM408_19800 PF00188 Cysteine-rich secretory protein family KM408_19800 PF14504 CAP-associated N-terminal KM408_19805 PF08868 YugN-like family KM408_19810 PF00795 Carbon-nitrogen hydrolase KM408_19815 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KM408_19820 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KM408_19825 PF00510 Cytochrome c oxidase subunit III KM408_19830 PF00115 Cytochrome C and Quinol oxidase polypeptide I KM408_19835 PF00034 Cytochrome c KM408_19835 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KM408_19835 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KM408_19840 PF01040 UbiA prenyltransferase family KM408_19845 PF02628 Cytochrome oxidase assembly protein KM408_19850 PF02785 Biotin carboxylase C-terminal domain KM408_19850 PF00289 Biotin carboxylase, N-terminal domain KM408_19850 PF00364 Biotin-requiring enzyme KM408_19850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM408_19850 PF00682 HMGL-like KM408_19850 PF02436 Conserved carboxylase domain KM408_19855 PF01098 Cell cycle protein KM408_19860 PF07408 Protein of unknown function (DUF1507) KM408_19870 PF02562 PhoH-like protein KM408_19870 PF13638 PIN domain KM408_19880 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KM408_19890 PF14036 YlaH-like protein KM408_19895 PF00679 Elongation factor G C-terminus KM408_19895 PF14492 Elongation Factor G, domain II KM408_19895 PF00009 Elongation factor Tu GTP binding domain KM408_19895 PF03144 Elongation factor Tu domain 2 KM408_19905 PF00459 Inositol monophosphatase family KM408_19915 PF06335 Protein of unknown function (DUF1054) KM408_19920 PF05256 Uncharacterised protein family (UPF0223) KM408_19925 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KM408_19925 PF01276 Orn/Lys/Arg decarboxylase, major domain KM408_19965 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_19965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM408_19970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM408_19970 PF00364 Biotin-requiring enzyme KM408_19970 PF02817 e3 binding domain KM408_19975 PF02780 Transketolase, C-terminal domain KM408_19975 PF02779 Transketolase, pyrimidine binding domain KM408_19980 PF00676 Dehydrogenase E1 component KM408_19990 PF01327 Polypeptide deformylase KM408_20000 PF07288 Protein of unknown function (DUF1447) KM408_20005 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KM408_20005 PF17770 Ribonuclease J C-terminal domain KM408_20005 PF00753 Metallo-beta-lactamase superfamily KM408_20010 PF02080 TrkA-C domain KM408_20010 PF02254 TrkA-N domain KM408_20020 PF07687 Peptidase dimerisation domain KM408_20020 PF01546 Peptidase family M20/M25/M40 KM408_20025 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KM408_20025 PF00132 Bacterial transferase hexapeptide (six repeats) KM408_20025 PF14602 Hexapeptide repeat of succinyl-transferase KM408_20030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM408_20030 PF03466 LysR substrate binding domain KM408_20045 PF04308 Ribonuclease H-like KM408_20055 PF08796 Protein of unknown function (DUF1797) KM408_20070 PF00563 EAL domain KM408_20070 PF10388 EAL-domain associated signalling protein domain KM408_20080 PF10518 TAT (twin-arginine translocation) pathway signal sequence KM408_20080 PF00149 Calcineurin-like phosphoesterase KM408_20090 PF02503 Polyphosphate kinase middle domain KM408_20090 PF13090 Polyphosphate kinase C-terminal domain 2 KM408_20090 PF17941 Polyphosphate kinase C-terminal domain 1 KM408_20090 PF13089 Polyphosphate kinase N-terminal domain KM408_20095 PF02541 Ppx/GppA phosphatase family KM408_20100 PF14177 YkyB-like protein KM408_20125 PF07690 Major Facilitator Superfamily KM408_20135 PF08267 Cobalamin-independent synthase, N-terminal domain KM408_20135 PF01717 Cobalamin-independent synthase, Catalytic domain KM408_20145 PF14040 Deoxyribonuclease NucA/NucB KM408_20155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_20155 PF00512 His Kinase A (phospho-acceptor) domain KM408_20165 PF00155 Aminotransferase class I and II KM408_20170 PF00356 Bacterial regulatory proteins, lacI family KM408_20170 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM408_20175 PF00528 Binding-protein-dependent transport system inner membrane component KM408_20180 PF00528 Binding-protein-dependent transport system inner membrane component KM408_20185 PF13416 Bacterial extracellular solute-binding protein KM408_20190 PF00128 Alpha amylase, catalytic domain KM408_20190 PF02903 Alpha amylase, N-terminal ig-like domain KM408_20190 PF16657 Maltogenic Amylase, C-terminal domain KM408_20195 PF00128 Alpha amylase, catalytic domain KM408_20195 PF16657 Maltogenic Amylase, C-terminal domain KM408_20200 PF00005 ABC transporter KM408_20200 PF03459 TOBE domain KM408_20200 PF17912 MalK OB fold domain KM408_20240 PF00108 Thiolase, N-terminal domain KM408_20240 PF02803 Thiolase, C-terminal domain KM408_20245 PF00293 NUDIX domain KM408_20275 PF03551 Transcriptional regulator PadR-like family KM408_20290 PF01008 Initiation factor 2 subunit family KM408_20295 PF01636 Phosphotransferase enzyme family KM408_20300 PF00795 Carbon-nitrogen hydrolase KM408_20305 PF00155 Aminotransferase class I and II KM408_20310 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KM408_20310 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KM408_20320 PF00596 Class II Aldolase and Adducin N-terminal domain KM408_20325 PF03079 ARD/ARD' family KM408_20345 PF00990 Diguanylate cyclase, GGDEF domain KM408_20345 PF08448 PAS fold KM408_20350 PF00881 Nitroreductase family KM408_20365 PF02896 PEP-utilising enzyme, TIM barrel domain KM408_20365 PF05524 PEP-utilising enzyme, N-terminal KM408_20365 PF00391 PEP-utilising enzyme, mobile domain KM408_20370 PF00381 PTS HPr component phosphorylation site KM408_20375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM408_20375 PF00367 phosphotransferase system, EIIB KM408_20375 PF02378 Phosphotransferase system, EIIC KM408_20380 PF03123 CAT RNA binding domain KM408_20380 PF00874 PRD domain KM408_20390 PF00392 Bacterial regulatory proteins, gntR family KM408_20390 PF07702 UTRA domain KM408_20395 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KM408_20400 PF01979 Amidohydrolase family KM408_20410 PF04079 Segregation and condensation complex subunit ScpB KM408_20415 PF02616 Segregation and condensation protein ScpA KM408_20425 PF03745 Domain of unknown function (DUF309) KM408_20430 PF00583 Acetyltransferase (GNAT) family KM408_20435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KM408_20440 PF06207 Protein of unknown function (DUF1002) KM408_20450 PF03323 Bacillus/Clostridium GerA spore germination protein KM408_20455 PF14097 Stage V sporulation protein AE1 KM408_20460 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM408_20465 PF07451 Stage V sporulation protein AD (SpoVAD) KM408_20470 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM408_20475 PF13782 Stage V sporulation protein AB KM408_20480 PF12164 Stage V sporulation protein AA KM408_20490 PF00209 Sodium:neurotransmitter symporter family KM408_20495 PF04545 Sigma-70, region 4 KM408_20495 PF04539 Sigma-70 region 3 KM408_20495 PF04542 Sigma-70 region 2 KM408_20500 PF13581 Histidine kinase-like ATPase domain KM408_20505 PF01740 STAS domain KM408_20510 PF07943 Penicillin-binding protein 5, C-terminal domain KM408_20510 PF00768 D-alanyl-D-alanine carboxypeptidase KM408_20515 PF00392 Bacterial regulatory proteins, gntR family KM408_20520 PF00005 ABC transporter KM408_20535 PF01047 MarR family KM408_20545 PF00860 Permease family KM408_20550 PF01544 CorA-like Mg2+ transporter protein KM408_20555 PF00591 Glycosyl transferase family, a/b domain KM408_20555 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KM408_20555 PF02885 Glycosyl transferase family, helical bundle domain KM408_20560 PF01048 Phosphorylase superfamily KM408_20565 PF01676 Metalloenzyme superfamily KM408_20575 PF02899 Phage integrase, N-terminal SAM-like domain KM408_20575 PF00589 Phage integrase family KM408_20580 PF14004 Protein of unknown function (DUF4227) KM408_20585 PF01475 Ferric uptake regulator family KM408_20590 PF01944 Stage II sporulation protein M KM408_20600 PF00293 NUDIX domain KM408_20605 PF13072 Mother cell inhibitor of FtsZ KM408_20610 PF00248 Aldo/keto reductase family KM408_20615 PF00248 Aldo/keto reductase family KM408_20620 PF13673 Acetyltransferase (GNAT) domain KM408_20620 PF04229 GrpB protein KM408_20630 PF00565 Staphylococcal nuclease homologue KM408_20630 PF02872 5'-nucleotidase, C-terminal domain KM408_20630 PF00746 LPXTG cell wall anchor motif KM408_20630 PF00149 Calcineurin-like phosphoesterase KM408_20640 PF12146 Serine aminopeptidase, S33 KM408_20645 PF03553 Na+/H+ antiporter family KM408_20645 PF13726 Na+-H+ antiporter family KM408_20650 PF00356 Bacterial regulatory proteins, lacI family KM408_20655 PF00583 Acetyltransferase (GNAT) family KM408_20660 PF12146 Serine aminopeptidase, S33 KM408_20665 PF10827 Protein of unknown function (DUF2552) KM408_20675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM408_20675 PF01872 RibD C-terminal domain KM408_20680 PF00677 Lumazine binding domain KM408_20685 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KM408_20685 PF00925 GTP cyclohydrolase II KM408_20690 PF00885 6,7-dimethyl-8-ribityllumazine synthase KM408_20700 PF04055 Radical SAM superfamily KM408_20700 PF06968 Biotin and Thiamin Synthesis associated domain KM408_20705 PF13847 Methyltransferase domain KM408_20710 PF08241 Methyltransferase domain KM408_20710 PF12697 Alpha/beta hydrolase family KM408_20715 PF00155 Aminotransferase class I and II KM408_20725 PF00202 Aminotransferase class-III KM408_20735 PF03553 Na+/H+ antiporter family KM408_20740 PF02872 5'-nucleotidase, C-terminal domain KM408_20740 PF00149 Calcineurin-like phosphoesterase KM408_20750 PF01037 Lrp/AsnC ligand binding domain KM408_20750 PF13404 AsnC-type helix-turn-helix domain KM408_20765 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KM408_20765 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KM408_20770 PF00202 Aminotransferase class-III KM408_20775 PF00696 Amino acid kinase family KM408_20780 PF01960 ArgJ family KM408_20785 PF01118 Semialdehyde dehydrogenase, NAD binding domain KM408_20785 PF02774 Semialdehyde dehydrogenase, dimerisation domain KM408_20795 PF00106 short chain dehydrogenase KM408_20805 PF03807 NADP oxidoreductase coenzyme F420-dependent KM408_20805 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM408_20810 PF03313 Serine dehydratase alpha chain KM408_20815 PF03315 Serine dehydratase beta chain KM408_20815 PF01842 ACT domain KM408_20825 PF12706 Beta-lactamase superfamily domain KM408_20825 PF00753 Metallo-beta-lactamase superfamily KM408_20835 PF11798 IMS family HHH motif KM408_20835 PF11799 impB/mucB/samB family C-terminal domain KM408_20835 PF00817 impB/mucB/samB family KM408_20845 PF01546 Peptidase family M20/M25/M40 KM408_20845 PF07687 Peptidase dimerisation domain KM408_20850 PF13302 Acetyltransferase (GNAT) domain KM408_20865 PF03734 L,D-transpeptidase catalytic domain KM408_20870 PF11728 Putative aromatic acid exporter C-terminal domain KM408_20870 PF06081 Aromatic acid exporter family member 1 KM408_20875 PF00005 ABC transporter KM408_20880 PF00528 Binding-protein-dependent transport system inner membrane component KM408_20885 PF00497 Bacterial extracellular solute-binding proteins, family 3 KM408_20890 PF06491 Disulphide isomerase KM408_20895 PF11208 Protein of unknown function (DUF2992) KM408_20905 PF01098 Cell cycle protein KM408_20910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KM408_20910 PF00364 Biotin-requiring enzyme KM408_20910 PF02817 e3 binding domain KM408_20915 PF02780 Transketolase, C-terminal domain KM408_20915 PF02779 Transketolase, pyrimidine binding domain KM408_20920 PF00676 Dehydrogenase E1 component KM408_20925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KM408_20925 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_20930 PF00871 Acetokinase family KM408_20935 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KM408_20935 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KM408_20940 PF01515 Phosphate acetyl/butaryl transferase KM408_20945 PF02954 Bacterial regulatory protein, Fis family KM408_20945 PF00989 PAS fold KM408_20945 PF00158 Sigma-54 interaction domain KM408_20955 PF03009 Glycerophosphoryl diester phosphodiesterase family KM408_20960 PF14174 YycC-like protein KM408_20970 PF00072 Response regulator receiver domain KM408_20970 PF08769 Sporulation initiation factor Spo0A C terminal KM408_20975 PF17820 PDZ domain KM408_20975 PF05580 SpoIVB peptidase S55 KM408_20980 PF13476 AAA domain KM408_20985 PF01316 Arginine repressor, DNA binding domain KM408_20985 PF02863 Arginine repressor, C-terminal domain KM408_20990 PF01728 FtsJ-like methyltransferase KM408_20990 PF01479 S4 domain KM408_20995 PF02780 Transketolase, C-terminal domain KM408_20995 PF02779 Transketolase, pyrimidine binding domain KM408_20995 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KM408_21000 PF00348 Polyprenyl synthetase KM408_21005 PF02609 Exonuclease VII small subunit KM408_21010 PF13742 OB-fold nucleic acid binding domain KM408_21010 PF02601 Exonuclease VII, large subunit KM408_21015 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KM408_21015 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KM408_21020 PF01029 NusB family KM408_21025 PF03780 Asp23 family, cell envelope-related function KM408_21030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KM408_21030 PF00289 Biotin carboxylase, N-terminal domain KM408_21030 PF02785 Biotin carboxylase C-terminal domain KM408_21035 PF00364 Biotin-requiring enzyme KM408_21045 PF12685 SpoIIIAH-like protein KM408_21055 PF09581 Stage III sporulation protein AF (Spore_III_AF) KM408_21060 PF09546 Stage III sporulation protein AE (spore_III_AE) KM408_21065 PF06686 Stage III sporulation protein AC/AD protein family KM408_21070 PF06686 Stage III sporulation protein AC/AD protein family KM408_21075 PF09548 Stage III sporulation protein AB (spore_III_AB) KM408_21100 PF01132 Elongation factor P (EF-P) OB domain KM408_21100 PF08207 Elongation factor P (EF-P) KOW-like domain KM408_21100 PF09285 Elongation factor P, C-terminal KM408_21105 PF00557 Metallopeptidase family M24 KM408_21105 PF01321 Creatinase/Prolidase N-terminal domain KM408_21110 PF01220 Dehydroquinase class II KM408_21115 PF11085 Conserved membrane protein YqhR KM408_21120 PF07136 Protein of unknown function (DUF1385) KM408_21130 PF13419 Haloacid dehalogenase-like hydrolase KM408_21135 PF02742 Iron dependent repressor, metal binding and dimerisation domain KM408_21135 PF01325 Iron dependent repressor, N-terminal DNA binding domain KM408_21150 PF03099 Biotin/lipoate A/B protein ligase family KM408_21155 PF00581 Rhodanese-like domain KM408_21160 PF00356 Bacterial regulatory proteins, lacI family KM408_21160 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM408_21170 PF00893 Small Multidrug Resistance protein KM408_21175 PF00893 Small Multidrug Resistance protein KM408_21210 PF00005 ABC transporter KM408_21215 PF00392 Bacterial regulatory proteins, gntR family KM408_21230 PF02347 Glycine cleavage system P-protein KM408_21235 PF02347 Glycine cleavage system P-protein KM408_21240 PF08669 Glycine cleavage T-protein C-terminal barrel domain KM408_21240 PF01571 Aminomethyltransferase folate-binding domain KM408_21245 PF00271 Helicase conserved C-terminal domain KM408_21245 PF00176 SNF2 family N-terminal domain KM408_21250 PF11079 Bacterial protein YqhG of unknown function KM408_21270 PF14038 YqzE-like protein KM408_21275 PF01202 Shikimate kinase KM408_21300 PF07963 Prokaryotic N-terminal methylation motif KM408_21310 PF00482 Type II secretion system (T2SS), protein F KM408_21315 PF00437 Type II/IV secretion system protein KM408_21325 PF11117 Protein of unknown function (DUF2626) KM408_21330 PF00375 Sodium:dicarboxylate symporter family KM408_21365 PF04101 Glycosyltransferase family 28 C-terminal domain KM408_21365 PF03033 Glycosyltransferase family 28 N-terminal domain KM408_21370 PF02574 Homocysteine S-methyltransferase KM408_21370 PF00809 Pterin binding enzyme KM408_21370 PF02965 Vitamin B12 dependent methionine synthase, activation domain KM408_21370 PF02607 B12 binding domain KM408_21370 PF02310 B12 binding domain KM408_21375 PF02219 Methylenetetrahydrofolate reductase KM408_21375 PF02574 Homocysteine S-methyltransferase KM408_21380 PF01053 Cys/Met metabolism PLP-dependent enzyme KM408_21385 PF01053 Cys/Met metabolism PLP-dependent enzyme KM408_21395 PF01022 Bacterial regulatory protein, arsR family KM408_21405 PF00753 Metallo-beta-lactamase superfamily KM408_21410 PF10958 Protein of unknown function (DUF2759) KM408_21415 PF00480 ROK family KM408_21420 PF06014 Bacterial protein of unknown function (DUF910) KM408_21425 PF01812 5-formyltetrahydrofolate cyclo-ligase family KM408_21430 PF00471 Ribosomal protein L33 KM408_21435 PF00483 Nucleotidyl transferase KM408_21440 PF01895 PhoU domain KM408_21445 PF00005 ABC transporter KM408_21450 PF00528 Binding-protein-dependent transport system inner membrane component KM408_21455 PF00528 Binding-protein-dependent transport system inner membrane component KM408_21460 PF12849 PBP superfamily domain KM408_21465 PF00905 Penicillin binding protein transpeptidase domain KM408_21465 PF03717 Penicillin-binding Protein dimerisation domain KM408_21470 PF07690 Major Facilitator Superfamily KM408_21475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM408_21475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM408_21495 PF04551 GcpE protein KM408_21500 PF01475 Ferric uptake regulator family KM408_21505 PF00950 ABC 3 transport family KM408_21510 PF00005 ABC transporter KM408_21515 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM408_21515 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM408_21520 PF11116 Protein of unknown function (DUF2624) KM408_21525 PF01261 Xylose isomerase-like TIM barrel KM408_21530 PF00271 Helicase conserved C-terminal domain KM408_21530 PF00270 DEAD/DEAH box helicase KM408_21540 PF02401 LytB protein KM408_21545 PF01784 NIF3 (NGG1p interacting factor 3) KM408_21550 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KM408_21555 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM408_21560 PF04539 Sigma-70 region 3 KM408_21560 PF03979 Sigma-70 factor, region 1.1 KM408_21560 PF04542 Sigma-70 region 2 KM408_21560 PF00140 Sigma-70 factor, region 1.2 KM408_21560 PF04545 Sigma-70, region 4 KM408_21565 PF10410 DnaB-helicase binding domain of primase KM408_21565 PF01807 CHC2 zinc finger KM408_21565 PF08275 DNA primase catalytic core, N-terminal domain KM408_21575 PF03618 Kinase/pyrophosphorylase KM408_21580 PF00571 CBS domain KM408_21580 PF08279 HTH domain KM408_21585 PF11967 Recombination protein O N terminal KM408_21585 PF02565 Recombination protein O C terminal KM408_21595 PF07650 KH domain KM408_21595 PF01926 50S ribosome-binding GTPase KM408_21600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM408_21605 PF01219 Prokaryotic diacylglycerol kinase KM408_21610 PF02130 Uncharacterized protein family UPF0054 KM408_21615 PF07698 7TM receptor with intracellular HD hydrolase KM408_21615 PF07697 7TM-HD extracellular KM408_21615 PF01966 HD domain KM408_21620 PF02562 PhoH-like protein KM408_21625 PF06898 Putative stage IV sporulation protein YqfD KM408_21630 PF07873 YabP family KM408_21635 PF09424 Yqey-like protein KM408_21640 PF01165 Ribosomal protein S21 KM408_21645 PF04055 Radical SAM superfamily KM408_21645 PF01938 TRAM domain KM408_21645 PF00919 Uncharacterized protein family UPF0004 KM408_21650 PF04452 RNA methyltransferase KM408_21660 PF00226 DnaJ domain KM408_21660 PF01556 DnaJ C terminal domain KM408_21660 PF00684 DnaJ central domain KM408_21665 PF00012 Hsp70 protein KM408_21670 PF01025 GrpE KM408_21675 PF01628 HrcA protein C terminal domain KM408_21680 PF04055 Radical SAM superfamily KM408_21680 PF06969 HemN C-terminal domain KM408_21685 PF01638 HxlR-like helix-turn-helix KM408_21690 PF06421 GTP-binding protein LepA C-terminus KM408_21690 PF00679 Elongation factor G C-terminus KM408_21690 PF00009 Elongation factor Tu GTP binding domain KM408_21690 PF03144 Elongation factor Tu domain 2 KM408_21700 PF03418 Germination protease KM408_21705 PF01649 Ribosomal protein S20 KM408_21710 PF06144 DNA polymerase III, delta subunit KM408_21715 PF14141 YqzM-like protein KM408_21720 PF13567 Domain of unknown function (DUF4131) KM408_21720 PF00753 Metallo-beta-lactamase superfamily KM408_21720 PF03772 Competence protein KM408_21725 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KM408_21730 PF10531 SLBB domain KM408_21735 PF14748 Pyrroline-5-carboxylate reductase dimerisation KM408_21735 PF03807 NADP oxidoreductase coenzyme F420-dependent KM408_21740 PF13649 Methyltransferase domain KM408_21750 PF01966 HD domain KM408_21755 PF01467 Cytidylyltransferase-like KM408_21760 PF01985 CRS1 / YhbY (CRM) domain KM408_21765 PF08501 Shikimate dehydrogenase substrate binding domain KM408_21765 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KM408_21765 PF01488 Shikimate / quinate 5-dehydrogenase KM408_21770 PF01926 50S ribosome-binding GTPase KM408_21785 PF02666 Phosphatidylserine decarboxylase KM408_21790 PF04542 Sigma-70 region 2 KM408_21790 PF04545 Sigma-70, region 4 KM408_21800 PF16244 Domain of unknown function (DUF4901) KM408_21805 PF00471 Ribosomal protein L33 KM408_21810 PF00881 Nitroreductase family KM408_21815 PF04607 Region found in RelA / SpoT proteins KM408_21825 PF00245 Alkaline phosphatase KM408_21835 PF00561 alpha/beta hydrolase fold KM408_21835 PF08386 TAP-like protein KM408_21870 PF02225 PA domain KM408_21870 PF00082 Subtilase family KM408_21870 PF13860 FlgD Ig-like domain KM408_21870 PF05922 Peptidase inhibitor I9 KM408_21875 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KM408_21890 PF07681 DoxX KM408_21920 PF00005 ABC transporter KM408_21925 PF01032 FecCD transport family KM408_21930 PF01497 Periplasmic binding protein KM408_21935 PF14143 YrhC-like protein KM408_21940 PF00171 Aldehyde dehydrogenase family KM408_21940 PF00465 Iron-containing alcohol dehydrogenase KM408_21945 PF01053 Cys/Met metabolism PLP-dependent enzyme KM408_21950 PF00291 Pyridoxal-phosphate dependent enzyme KM408_21955 PF01048 Phosphorylase superfamily KM408_21960 PF08241 Methyltransferase domain KM408_21975 PF03717 Penicillin-binding Protein dimerisation domain KM408_21975 PF00905 Penicillin binding protein transpeptidase domain KM408_21980 PF03449 Transcription elongation factor, N-terminal KM408_21980 PF01272 Transcription elongation factor, GreA/GreB, C-term KM408_21985 PF00485 Phosphoribulokinase / Uridine kinase family KM408_21990 PF01136 Peptidase family U32 KM408_21990 PF16325 Peptidase family U32 C-terminal domain KM408_21995 PF01136 Peptidase family U32 KM408_22000 PF01596 O-methyltransferase KM408_22005 PF02618 YceG-like family KM408_22010 PF06949 Protein of unknown function (DUF1292) KM408_22015 PF03652 Holliday junction resolvase KM408_22020 PF06135 IreB regulatory phosphoprotein KM408_22025 PF02272 DHHA1 domain KM408_22025 PF01411 tRNA synthetases class II (A) KM408_22025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM408_22035 PF01594 AI-2E family transporter KM408_22055 PF14490 Helix-hairpin-helix containing domain KM408_22055 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KM408_22055 PF13538 UvrD-like helicase C-terminal domain KM408_22070 PF00266 Aminotransferase class-V KM408_22075 PF02082 Transcriptional regulator KM408_22080 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM408_22080 PF12002 MgsA AAA+ ATPase C terminal KM408_22080 PF16193 AAA C-terminal domain KM408_22090 PF00899 ThiF family KM408_22095 PF01336 OB-fold nucleic acid binding domain KM408_22095 PF00152 tRNA synthetases class II (D, K and N) KM408_22095 PF02938 GAD domain KM408_22100 PF03129 Anticodon binding domain KM408_22100 PF13393 Histidyl-tRNA synthetase KM408_22110 PF02580 D-Tyr-tRNA(Tyr) deacylase KM408_22115 PF13291 ACT domain KM408_22115 PF04607 Region found in RelA / SpoT proteins KM408_22115 PF02824 TGS domain KM408_22120 PF00156 Phosphoribosyl transferase domain KM408_22125 PF01368 DHH family KM408_22125 PF02272 DHHA1 domain KM408_22125 PF17768 RecJ OB domain KM408_22125 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KM408_22130 PF01545 Cation efflux family KM408_22130 PF16916 Dimerisation domain of Zinc Transporter KM408_22135 PF02355 Protein export membrane protein KM408_22135 PF07549 SecD/SecF GG Motif KM408_22140 PF13797 Post-transcriptional regulator KM408_22145 PF14667 Polysaccharide biosynthesis C-terminal domain KM408_22145 PF01943 Polysaccharide biosynthesis protein KM408_22150 PF04239 Protein of unknown function (DUF421) KM408_22160 PF02699 Preprotein translocase subunit KM408_22165 PF01702 Queuine tRNA-ribosyltransferase KM408_22170 PF02547 Queuosine biosynthesis protein KM408_22175 PF11146 Protein of unknown function (DUF2905) KM408_22180 PF05491 RuvB C-terminal winged helix domain KM408_22180 PF17864 RuvB AAA lid domain KM408_22180 PF05496 Holliday junction DNA helicase RuvB P-loop domain KM408_22185 PF01330 RuvA N terminal domain KM408_22185 PF07499 RuvA, C-terminal domain KM408_22190 PF01497 Periplasmic binding protein KM408_22200 PF00892 EamA-like transporter family KM408_22205 PF00892 EamA-like transporter family KM408_22210 PF01022 Bacterial regulatory protein, arsR family KM408_22225 PF01476 LysM domain KM408_22230 PF02445 Quinolinate synthetase A protein KM408_22235 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KM408_22235 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KM408_22240 PF00890 FAD binding domain KM408_22240 PF02910 Fumarate reductase flavoprotein C-term KM408_22245 PF00266 Aminotransferase class-V KM408_22250 PF08279 HTH domain KM408_22250 PF02829 3H domain KM408_22255 PF03473 MOSC domain KM408_22255 PF03475 3-alpha domain KM408_22260 PF01842 ACT domain KM408_22260 PF00800 Prephenate dehydratase KM408_22265 PF02687 FtsX-like permease family KM408_22270 PF02687 FtsX-like permease family KM408_22275 PF00005 ABC transporter KM408_22285 PF00072 Response regulator receiver domain KM408_22285 PF00486 Transcriptional regulatory protein, C terminal KM408_22290 PF09269 Domain of unknown function (DUF1967) KM408_22290 PF01018 GTP1/OBG KM408_22290 PF01926 50S ribosome-binding GTPase KM408_22295 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KM408_22295 PF14682 Sporulation initiation phospho-transferase B, C-terminal KM408_22300 PF01016 Ribosomal L27 protein KM408_22305 PF04327 Cysteine protease Prp KM408_22310 PF00829 Ribosomal prokaryotic L21 protein KM408_22315 PF10150 Ribonuclease E/G family KM408_22315 PF00575 S1 RNA binding domain KM408_22320 PF02163 Peptidase family M50 KM408_22325 PF01551 Peptidase family M23 KM408_22330 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KM408_22335 PF03775 Septum formation inhibitor MinC, C-terminal domain KM408_22345 PF04085 rod shape-determining protein MreC KM408_22355 PF04002 RadC-like JAB domain KM408_22360 PF02545 Maf-like protein KM408_22370 PF08245 Mur ligase middle domain KM408_22370 PF02875 Mur ligase family, glutamate ligase domain KM408_22375 PF00133 tRNA synthetases class I (I, L, M and V) KM408_22375 PF08264 Anticodon-binding domain of tRNA KM408_22375 PF10458 Valyl tRNA synthetase tRNA binding arm KM408_22385 PF01476 LysM domain KM408_22390 PF00202 Aminotransferase class-III KM408_22395 PF00490 Delta-aminolevulinic acid dehydratase KM408_22400 PF02602 Uroporphyrinogen-III synthase HemD KM408_22405 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KM408_22405 PF03900 Porphobilinogen deaminase, C-terminal domain KM408_22410 PF01578 Cytochrome C assembly protein KM408_22415 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KM408_22415 PF01488 Shikimate / quinate 5-dehydrogenase KM408_22415 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KM408_22420 PF01047 MarR family KM408_22425 PF02566 OsmC-like protein KM408_22430 PF01926 50S ribosome-binding GTPase KM408_22435 PF00004 ATPase family associated with various cellular activities (AAA) KM408_22435 PF05362 Lon protease (S16) C-terminal proteolytic domain KM408_22435 PF02190 ATP-dependent protease La (LON) substrate-binding domain KM408_22440 PF00004 ATPase family associated with various cellular activities (AAA) KM408_22440 PF05362 Lon protease (S16) C-terminal proteolytic domain KM408_22445 PF10431 C-terminal, D2-small domain, of ClpB protein KM408_22445 PF06689 ClpX C4-type zinc finger KM408_22445 PF07724 AAA domain (Cdc48 subfamily) KM408_22450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KM408_22450 PF05698 Bacterial trigger factor protein (TF) C-terminus KM408_22450 PF05697 Bacterial trigger factor protein (TF) KM408_22465 PF08000 Bacterial PH domain KM408_22465 PF11724 YvbH-like oligomerisation region KM408_22485 PF12850 Calcineurin-like phosphoesterase superfamily domain KM408_22490 PF01725 Ham1 family KM408_22495 PF01138 3' exoribonuclease family, domain 1 KM408_22495 PF03725 3' exoribonuclease family, domain 2 KM408_22500 PF10646 Sporulation and spore germination KM408_22505 PF01177 Asp/Glu/Hydantoin racemase KM408_22510 PF07690 Major Facilitator Superfamily KM408_22520 PF00440 Bacterial regulatory proteins, tetR family KM408_22535 PF00196 Bacterial regulatory proteins, luxR family KM408_22540 PF00860 Permease family KM408_22550 PF07969 Amidohydrolase family KM408_22555 PF07969 Amidohydrolase family KM408_22560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_22565 PF12911 N-terminal TM domain of oligopeptide transport permease C KM408_22565 PF00528 Binding-protein-dependent transport system inner membrane component KM408_22570 PF00528 Binding-protein-dependent transport system inner membrane component KM408_22575 PF00005 ABC transporter KM408_22575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM408_22580 PF00005 ABC transporter KM408_22580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KM408_22585 PF07694 5TMR of 5TMR-LYT KM408_22585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_22585 PF06580 Histidine kinase KM408_22590 PF00072 Response regulator receiver domain KM408_22590 PF04397 LytTr DNA-binding domain KM408_22605 PF04024 PspC domain KM408_22610 PF01381 Helix-turn-helix KM408_22610 PF07883 Cupin domain KM408_22615 PF13536 Putative multidrug resistance efflux transporter KM408_22620 PF00230 Major intrinsic protein KM408_22625 PF02082 Transcriptional regulator KM408_22635 PF00005 ABC transporter KM408_22635 PF13732 Domain of unknown function (DUF4162) KM408_22640 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KM408_22650 PF01618 MotA/TolQ/ExbB proton channel family KM408_22655 PF02557 D-alanyl-D-alanine carboxypeptidase KM408_22660 PF03061 Thioesterase superfamily KM408_22665 PF13085 2Fe-2S iron-sulfur cluster binding domain KM408_22665 PF13183 4Fe-4S dicluster domain KM408_22670 PF00890 FAD binding domain KM408_22670 PF02910 Fumarate reductase flavoprotein C-term KM408_22675 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KM408_22680 PF10702 Protein of unknown function (DUF2507) KM408_22685 PF08459 UvrC Helix-hairpin-helix N-terminal KM408_22685 PF01541 GIY-YIG catalytic domain KM408_22685 PF02151 UvrB/uvrC motif KM408_22690 PF00085 Thioredoxin KM408_22695 PF00766 Electron transfer flavoprotein FAD-binding domain KM408_22695 PF01012 Electron transfer flavoprotein domain KM408_22700 PF01012 Electron transfer flavoprotein domain KM408_22705 PF00378 Enoyl-CoA hydratase/isomerase KM408_22710 PF08359 YsiA-like protein, C-terminal region KM408_22710 PF00440 Bacterial regulatory proteins, tetR family KM408_22715 PF00501 AMP-binding enzyme KM408_22715 PF13193 AMP-binding enzyme C-terminal domain KM408_22725 PF01497 Periplasmic binding protein KM408_22730 PF01032 FecCD transport family KM408_22735 PF05163 DinB family KM408_22765 PF00005 ABC transporter KM408_22770 PF00512 His Kinase A (phospho-acceptor) domain KM408_22770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_22775 PF00072 Response regulator receiver domain KM408_22775 PF00486 Transcriptional regulatory protein, C terminal KM408_22785 PF09962 Uncharacterized conserved protein (DUF2196) KM408_22790 PF10672 S-adenosylmethionine-dependent methyltransferase KM408_22790 PF17785 PUA-like domain KM408_22800 PF03992 Antibiotic biosynthesis monooxygenase KM408_22805 PF04203 Sortase domain KM408_22810 PF00005 ABC transporter KM408_22815 PF01032 FecCD transport family KM408_22820 PF01497 Periplasmic binding protein KM408_22825 PF05031 Iron Transport-associated domain KM408_22835 PF05031 Iron Transport-associated domain KM408_22840 PF05525 Branched-chain amino acid transport protein KM408_22845 PF00849 RNA pseudouridylate synthase KM408_22845 PF01479 S4 domain KM408_22850 PF00488 MutS domain V KM408_22850 PF01713 Smr domain KM408_22855 PF02811 PHP domain KM408_22855 PF14791 DNA polymerase beta thumb KM408_22855 PF14716 Helix-hairpin-helix domain KM408_22860 PF02674 Colicin V production protein KM408_22865 PF05164 Cell division protein ZapA KM408_22870 PF11858 Domain of unknown function (DUF3378) KM408_22870 PF01351 Ribonuclease HII KM408_22890 PF00152 tRNA synthetases class II (D, K and N) KM408_22890 PF01336 OB-fold nucleic acid binding domain KM408_22895 PF03483 B3/4 domain KM408_22895 PF03484 tRNA synthetase B5 domain KM408_22895 PF03147 Ferredoxin-fold anticodon binding domain KM408_22895 PF01588 Putative tRNA binding domain KM408_22895 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KM408_22900 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KM408_22900 PF01409 tRNA synthetases class II core domain (F) KM408_22905 PF08032 RNA 2'-O ribose methyltransferase substrate binding KM408_22905 PF00588 SpoU rRNA Methylase family KM408_22910 PF14098 Small, acid-soluble spore protein I KM408_22915 PF01966 HD domain KM408_22940 PF07690 Major Facilitator Superfamily KM408_22950 PF00440 Bacterial regulatory proteins, tetR family KM408_22950 PF16859 Tetracyclin repressor-like, C-terminal domain KM408_22955 PF05343 M42 glutamyl aminopeptidase KM408_22965 PF00453 Ribosomal protein L20 KM408_22970 PF01632 Ribosomal protein L35 KM408_22975 PF00707 Translation initiation factor IF-3, C-terminal domain KM408_22975 PF05198 Translation initiation factor IF-3, N-terminal domain KM408_22980 PF03129 Anticodon binding domain KM408_22980 PF02824 TGS domain KM408_22980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM408_22980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KM408_22985 PF08812 YtxC-like family KM408_22990 PF01695 IstB-like ATP binding protein KM408_22990 PF07319 Primosomal protein DnaI N-terminus KM408_22995 PF07261 Replication initiation and membrane attachment KM408_23000 PF03477 ATP cone domain KM408_23005 PF02675 S-adenosylmethionine decarboxylase KM408_23010 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM408_23010 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM408_23015 PF01121 Dephospho-CoA kinase KM408_23020 PF02659 Putative manganese efflux pump KM408_23025 PF06827 Zinc finger found in FPG and IleRS KM408_23025 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KM408_23025 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KM408_23030 PF00476 DNA polymerase family A KM408_23030 PF01367 5'-3' exonuclease, C-terminal SAM fold KM408_23030 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KM408_23035 PF00989 PAS fold KM408_23035 PF16736 Single Cache-like KM408_23035 PF00512 His Kinase A (phospho-acceptor) domain KM408_23035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_23040 PF00486 Transcriptional regulatory protein, C terminal KM408_23040 PF00072 Response regulator receiver domain KM408_23055 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM408_23055 PF00056 lactate/malate dehydrogenase, NAD binding domain KM408_23060 PF00180 Isocitrate/isopropylmalate dehydrogenase KM408_23065 PF00285 Citrate synthase, C-terminal domain KM408_23070 PF04284 Protein of unknown function (DUF441) KM408_23075 PF01594 AI-2E family transporter KM408_23080 PF04186 FxsA cytoplasmic membrane protein KM408_23085 PF00391 PEP-utilising enzyme, mobile domain KM408_23085 PF00224 Pyruvate kinase, barrel domain KM408_23085 PF02887 Pyruvate kinase, alpha/beta domain KM408_23090 PF00365 Phosphofructokinase KM408_23095 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KM408_23100 PF17848 Acetyl-coA carboxylase zinc finger domain KM408_23100 PF01039 Carboxyl transferase domain KM408_23105 PF00392 Bacterial regulatory proteins, gntR family KM408_23110 PF00390 Malic enzyme, N-terminal domain KM408_23110 PF03949 Malic enzyme, NAD binding domain KM408_23115 PF07733 Bacterial DNA polymerase III alpha NTPase domain KM408_23115 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KM408_23115 PF14579 Helix-hairpin-helix motif KM408_23115 PF02811 PHP domain KM408_23115 PF01336 OB-fold nucleic acid binding domain KM408_23120 PF14034 Sporulation protein YtrH KM408_23130 PF01368 DHH family KM408_23130 PF02272 DHHA1 domain KM408_23135 PF14007 YtpI-like protein KM408_23150 PF00392 Bacterial regulatory proteins, gntR family KM408_23150 PF03061 Thioesterase superfamily KM408_23150 PF00571 CBS domain KM408_23150 PF07085 DRTGG domain KM408_23165 PF00557 Metallopeptidase family M24 KM408_23165 PF01321 Creatinase/Prolidase N-terminal domain KM408_23170 PF11518 Protein of unknown function (DUF3221) KM408_23200 PF12746 GNAT acetyltransferase KM408_23205 PF07883 Cupin domain KM408_23215 PF01381 Helix-turn-helix KM408_23225 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KM408_23225 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KM408_23235 PF00582 Universal stress protein family KM408_23255 PF00206 Lyase KM408_23255 PF14698 Argininosuccinate lyase C-terminal KM408_23260 PF00764 Arginosuccinate synthase KM408_23275 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM408_23275 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM408_23280 PF12787 EcsC protein family KM408_23295 PF00871 Acetokinase family KM408_23300 PF02384 N-6 DNA Methylase KM408_23305 PF08534 Redoxin KM408_23310 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KM408_23320 PF01513 ATP-NAD kinase KM408_23325 PF07969 Amidohydrolase family KM408_23335 PF00501 AMP-binding enzyme KM408_23335 PF13193 AMP-binding enzyme C-terminal domain KM408_23340 PF00269 Small, acid-soluble spore proteins, alpha/beta type KM408_23345 PF02926 THUMP domain KM408_23345 PF02568 Thiamine biosynthesis protein (ThiI) KM408_23350 PF00266 Aminotransferase class-V KM408_23355 PF06160 Septation ring formation regulator, EzrA KM408_23360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM408_23360 PF03466 LysR substrate binding domain KM408_23365 PF00892 EamA-like transporter family KM408_23375 PF13185 GAF domain KM408_23380 PF01053 Cys/Met metabolism PLP-dependent enzyme KM408_23385 PF00163 Ribosomal protein S4/S9 N-terminal domain KM408_23385 PF01479 S4 domain KM408_23400 PF01479 S4 domain KM408_23400 PF00579 tRNA synthetases class I (W and Y) KM408_23410 PF08281 Sigma-70, region 4 KM408_23410 PF04542 Sigma-70 region 2 KM408_23420 PF00501 AMP-binding enzyme KM408_23420 PF13193 AMP-binding enzyme C-terminal domain KM408_23425 PF00583 Acetyltransferase (GNAT) family KM408_23430 PF00571 CBS domain KM408_23435 PF00850 Histone deacetylase domain KM408_23445 PF00486 Transcriptional regulatory protein, C terminal KM408_23445 PF00072 Response regulator receiver domain KM408_23450 PF00672 HAMP domain KM408_23450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_23450 PF00512 His Kinase A (phospho-acceptor) domain KM408_23450 PF13426 PAS domain KM408_23455 PF12796 Ankyrin repeats (3 copies) KM408_23460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KM408_23465 PF01741 Large-conductance mechanosensitive channel, MscL KM408_23490 PF00356 Bacterial regulatory proteins, lacI family KM408_23495 PF07537 CamS sex pheromone cAM373 precursor KM408_23500 PF11009 Protein of unknown function (DUF2847) KM408_23510 PF02073 Thermophilic metalloprotease (M29) KM408_23530 PF13302 Acetyltransferase (GNAT) domain KM408_23535 PF01225 Mur ligase family, catalytic domain KM408_23535 PF02875 Mur ligase family, glutamate ligase domain KM408_23535 PF08245 Mur ligase middle domain KM408_23545 PF17854 FtsK alpha domain KM408_23545 PF09397 Ftsk gamma domain KM408_23545 PF01580 FtsK/SpoIIIE family KM408_23555 PF14794 Domain of unknown function (DUF4479) KM408_23555 PF01588 Putative tRNA binding domain KM408_23560 PF07285 Protein of unknown function (DUF1444) KM408_23565 PF00085 Thioredoxin KM408_23570 PF01931 Protein of unknown function DUF84 KM408_23575 PF05343 M42 glutamyl aminopeptidase KM408_23585 PF00753 Metallo-beta-lactamase superfamily KM408_23590 PF02390 Putative methyltransferase KM408_23595 PF14165 YtzH-like protein KM408_23600 PF01636 Phosphotransferase enzyme family KM408_23605 PF00128 Alpha amylase, catalytic domain KM408_23605 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM408_23605 PF17999 Pullulanase N1-terminal domain KM408_23610 PF02834 LigT like Phosphoesterase KM408_23620 PF08220 DeoR-like helix-turn-helix domain KM408_23625 PF01479 S4 domain KM408_23625 PF00849 RNA pseudouridylate synthase KM408_23630 PF14667 Polysaccharide biosynthesis C-terminal domain KM408_23630 PF01943 Polysaccharide biosynthesis protein KM408_23640 PF07690 Major Facilitator Superfamily KM408_23645 PF01022 Bacterial regulatory protein, arsR family KM408_23650 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KM408_23660 PF10957 Sporulation protein Cse60 KM408_23670 PF02559 CarD-like/TRCF domain KM408_23680 PF06800 Sugar transport protein KM408_23695 PF02391 MoaE protein KM408_23700 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KM408_23705 PF00994 Probable molybdopterin binding domain KM408_23705 PF03454 MoeA C-terminal region (domain IV) KM408_23705 PF03453 MoeA N-terminal region (domain I and II) KM408_23710 PF01967 MoaC family KM408_23715 PF00899 ThiF family KM408_23740 PF00581 Rhodanese-like domain KM408_23750 PF00561 alpha/beta hydrolase fold KM408_23755 PF03323 Bacillus/Clostridium GerA spore germination protein KM408_23760 PF03845 Spore germination protein KM408_23790 PF08264 Anticodon-binding domain of tRNA KM408_23790 PF00133 tRNA synthetases class I (I, L, M and V) KM408_23790 PF13603 Leucyl-tRNA synthetase, Domain 2 KM408_23790 PF09334 tRNA synthetases class I (M) KM408_23795 PF07690 Major Facilitator Superfamily KM408_23800 PF00999 Sodium/hydrogen exchanger family KM408_23805 PF02080 TrkA-C domain KM408_23810 PF00589 Phage integrase family KM408_23820 PF00005 ABC transporter KM408_23825 PF07786 Protein of unknown function (DUF1624) KM408_23825 PF04235 Protein of unknown function (DUF418) KM408_23835 PF10732 Protein of unknown function (DUF2524) KM408_23840 PF16199 Radical_SAM C-terminal domain KM408_23840 PF04055 Radical SAM superfamily KM408_23845 PF06962 Putative rRNA methylase KM408_23850 PF13732 Domain of unknown function (DUF4162) KM408_23850 PF00005 ABC transporter KM408_23860 PF01177 Asp/Glu/Hydantoin racemase KM408_23875 PF10776 Protein of unknown function (DUF2600) KM408_23880 PF12146 Serine aminopeptidase, S33 KM408_23885 PF00132 Bacterial transferase hexapeptide (six repeats) KM408_23890 PF01569 PAP2 superfamily KM408_23895 PF00534 Glycosyl transferases group 1 KM408_23895 PF13439 Glycosyltransferase Family 4 KM408_23900 PF12804 MobA-like NTP transferase domain KM408_23905 PF00994 Probable molybdopterin binding domain KM408_23920 PF02773 S-adenosylmethionine synthetase, C-terminal domain KM408_23920 PF02772 S-adenosylmethionine synthetase, central domain KM408_23920 PF00438 S-adenosylmethionine synthetase, N-terminal domain KM408_23925 PF01293 Phosphoenolpyruvate carboxykinase KM408_23960 PF01784 NIF3 (NGG1p interacting factor 3) KM408_23965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_23965 PF00989 PAS fold KM408_23965 PF00512 His Kinase A (phospho-acceptor) domain KM408_23965 PF13188 PAS domain KM408_23965 PF13426 PAS domain KM408_23970 PF08447 PAS fold KM408_23970 PF00512 His Kinase A (phospho-acceptor) domain KM408_23970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_23970 PF00989 PAS fold KM408_23975 PF00561 alpha/beta hydrolase fold KM408_23975 PF08386 TAP-like protein KM408_24000 PF00005 ABC transporter KM408_24005 PF00528 Binding-protein-dependent transport system inner membrane component KM408_24030 PF00293 NUDIX domain KM408_24050 PF02664 S-Ribosylhomocysteinase (LuxS) KM408_24055 PF01809 Putative membrane protein insertion efficiency factor KM408_24060 PF00484 Carbonic anhydrase KM408_24065 PF01654 Cytochrome bd terminal oxidase subunit I KM408_24070 PF02322 Cytochrome bd terminal oxidase subunit II KM408_24075 PF10676 Spore germination protein gerPA/gerPF KM408_24090 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM408_24090 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM408_24115 PF04012 PspA/IM30 family KM408_24130 PF07664 Ferrous iron transport protein B C terminus KM408_24130 PF17910 FeoB cytosolic helical domain KM408_24130 PF02421 Ferrous iron transport protein B KM408_24130 PF07670 Nucleoside recognition KM408_24140 PF09515 Thiamine transporter protein (Thia_YuaJ) KM408_24145 PF00672 HAMP domain KM408_24145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_24145 PF00512 His Kinase A (phospho-acceptor) domain KM408_24150 PF00072 Response regulator receiver domain KM408_24150 PF00486 Transcriptional regulatory protein, C terminal KM408_24175 PF00156 Phosphoribosyl transferase domain KM408_24180 PF00781 Diacylglycerol kinase catalytic domain KM408_24200 PF00248 Aldo/keto reductase family KM408_24215 PF09335 SNARE associated Golgi protein KM408_24220 PF00398 Ribosomal RNA adenine dimethylase KM408_24225 PF02687 FtsX-like permease family KM408_24230 PF00005 ABC transporter KM408_24235 PF06445 GyrI-like small molecule binding domain KM408_24235 PF12833 Helix-turn-helix domain KM408_24240 PF00486 Transcriptional regulatory protein, C terminal KM408_24240 PF00072 Response regulator receiver domain KM408_24245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_24250 PF02687 FtsX-like permease family KM408_24260 PF02687 FtsX-like permease family KM408_24265 PF00005 ABC transporter KM408_24280 PF02447 GntP family permease KM408_24285 PF07702 UTRA domain KM408_24285 PF00392 Bacterial regulatory proteins, gntR family KM408_24295 PF07071 KDGP aldolase KM408_24300 PF03841 L-seryl-tRNA selenium transferase KM408_24305 PF01979 Amidohydrolase family KM408_24320 PF02557 D-alanyl-D-alanine carboxypeptidase KM408_24325 PF00512 His Kinase A (phospho-acceptor) domain KM408_24325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_24330 PF00072 Response regulator receiver domain KM408_24330 PF00486 Transcriptional regulatory protein, C terminal KM408_24335 PF13378 Enolase C-terminal domain-like KM408_24335 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KM408_24340 PF13193 AMP-binding enzyme C-terminal domain KM408_24340 PF00501 AMP-binding enzyme KM408_24345 PF00378 Enoyl-CoA hydratase/isomerase KM408_24350 PF00561 alpha/beta hydrolase fold KM408_24355 PF16582 Middle domain of thiamine pyrophosphate KM408_24355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KM408_24355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KM408_24360 PF00425 chorismate binding enzyme KM408_24365 PF01040 UbiA prenyltransferase family KM408_24370 PF01258 Prokaryotic dksA/traR C4-type zinc finger KM408_24375 PF00313 'Cold-shock' DNA-binding domain KM408_24390 PF00343 Carbohydrate phosphorylase KM408_24395 PF00534 Glycosyl transferases group 1 KM408_24395 PF08323 Starch synthase catalytic domain KM408_24400 PF00483 Nucleotidyl transferase KM408_24405 PF00483 Nucleotidyl transferase KM408_24410 PF00128 Alpha amylase, catalytic domain KM408_24410 PF02806 Alpha amylase, C-terminal all-beta domain KM408_24410 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KM408_24425 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM408_24425 PF00056 lactate/malate dehydrogenase, NAD binding domain KM408_24520 PF05698 Bacterial trigger factor protein (TF) C-terminus KM408_24520 PF05697 Bacterial trigger factor protein (TF) KM408_24555 PF02308 MgtC family KM408_24560 PF07885 Ion channel KM408_24560 PF02254 TrkA-N domain KM408_24565 PF08868 YugN-like family KM408_24570 PF00342 Phosphoglucose isomerase KM408_24575 PF04070 Domain of unknown function (DUF378) KM408_24580 PF00575 S1 RNA binding domain KM408_24585 PF00155 Aminotransferase class I and II KM408_24590 PF01037 Lrp/AsnC ligand binding domain KM408_24595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KM408_24595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KM408_24600 PF08386 TAP-like protein KM408_24600 PF00561 alpha/beta hydrolase fold KM408_24610 PF00155 Aminotransferase class I and II KM408_24625 PF08810 Kinase associated protein B KM408_24630 PF00929 Exonuclease KM408_24635 PF03600 Citrate transporter KM408_24650 PF03129 Anticodon binding domain KM408_24650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KM408_24655 PF03061 Thioesterase superfamily KM408_24665 PF02632 BioY family KM408_24675 PF00483 Nucleotidyl transferase KM408_24680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KM408_24680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KM408_24680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KM408_24680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KM408_24685 PF10372 Bacterial membrane-spanning protein N-terminus KM408_24685 PF02457 DisA bacterial checkpoint controller nucleotide-binding KM408_24690 PF00883 Cytosol aminopeptidase family, catalytic domain KM408_24690 PF02789 Cytosol aminopeptidase family, N-terminal domain KM408_24695 PF06725 3D domain KM408_24705 PF00293 NUDIX domain KM408_24705 PF13344 Haloacid dehalogenase-like hydrolase KM408_24710 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_24715 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_24725 PF06445 GyrI-like small molecule binding domain KM408_24740 PF04463 Protein of unknown function (DUF523) KM408_24760 PF01521 Iron-sulphur cluster biosynthesis KM408_24765 PF01678 Diaminopimelate epimerase KM408_24770 PF07293 Protein of unknown function (DUF1450) KM408_24775 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_24785 PF00005 ABC transporter KM408_24785 PF09383 NIL domain KM408_24790 PF03649 Uncharacterised protein family (UPF0014) KM408_24795 PF03831 PhnA domain KM408_24795 PF08274 PhnA Zinc-Ribbon KM408_24830 PF13427 Domain of unknown function (DUF4111) KM408_24830 PF01909 Nucleotidyltransferase domain KM408_24835 PF07315 Protein of unknown function (DUF1462) KM408_24840 PF01106 NifU-like domain KM408_24855 PF04608 Phosphatidylglycerophosphatase A KM408_24865 PF02525 Flavodoxin-like fold KM408_24870 PF13344 Haloacid dehalogenase-like hydrolase KM408_24880 PF01934 Protein of unknown function DUF86 KM408_24885 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM408_24900 PF06265 Protein of unknown function (DUF1027) KM408_24905 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KM408_24910 PF07739 TipAS antibiotic-recognition domain KM408_24910 PF13411 MerR HTH family regulatory protein KM408_24915 PF10086 YhfC intramembrane metalloprotease KM408_24935 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KM408_24935 PF04055 Radical SAM superfamily KM408_24940 PF01551 Peptidase family M23 KM408_24950 PF08827 Domain of unknown function (DUF1805) KM408_24955 PF02872 5'-nucleotidase, C-terminal domain KM408_24960 PF03551 Transcriptional regulator PadR-like family KM408_24965 PF04892 VanZ like family KM408_24970 PF01458 Uncharacterized protein family (UPF0051) KM408_24975 PF01592 NifU-like N terminal domain KM408_24980 PF00266 Aminotransferase class-V KM408_24985 PF01458 Uncharacterized protein family (UPF0051) KM408_24990 PF00005 ABC transporter KM408_24995 PF03180 NLPA lipoprotein KM408_25000 PF03180 NLPA lipoprotein KM408_25005 PF00528 Binding-protein-dependent transport system inner membrane component KM408_25010 PF09383 NIL domain KM408_25010 PF00005 ABC transporter KM408_25020 PF00085 Thioredoxin KM408_25025 PF01751 Toprim domain KM408_25030 PF01597 Glycine cleavage H-protein KM408_25035 PF03960 ArsC family KM408_25080 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KM408_25080 PF00056 lactate/malate dehydrogenase, NAD binding domain KM408_25100 PF00440 Bacterial regulatory proteins, tetR family KM408_25100 PF13305 Tetracyclin repressor-like, C-terminal domain KM408_25105 PF00753 Metallo-beta-lactamase superfamily KM408_25110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM408_25110 PF02770 Acyl-CoA dehydrogenase, middle domain KM408_25110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM408_25115 PF00108 Thiolase, N-terminal domain KM408_25115 PF02803 Thiolase, C-terminal domain KM408_25120 PF00378 Enoyl-CoA hydratase/isomerase KM408_25120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM408_25120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM408_25125 PF14115 YuzL-like protein KM408_25130 PF00768 D-alanyl-D-alanine carboxypeptidase KM408_25130 PF07943 Penicillin-binding protein 5, C-terminal domain KM408_25135 PF01619 Proline dehydrogenase KM408_25140 PF10835 Protein of unknown function (DUF2573) KM408_25145 PF01910 Thiamine-binding protein KM408_25150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM408_25150 PF00672 HAMP domain KM408_25150 PF02743 Cache domain KM408_25170 PF07690 Major Facilitator Superfamily KM408_25175 PF13520 Amino acid permease KM408_25185 PF02096 60Kd inner membrane protein KM408_25195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KM408_25195 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KM408_25230 PF09335 SNARE associated Golgi protein KM408_25240 PF17969 L,D-transpeptidase C-terminal domain KM408_25240 PF03734 L,D-transpeptidase catalytic domain KM408_25245 PF00486 Transcriptional regulatory protein, C terminal KM408_25245 PF00072 Response regulator receiver domain KM408_25250 PF00989 PAS fold KM408_25250 PF16736 Single Cache-like KM408_25250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_25250 PF00512 His Kinase A (phospho-acceptor) domain KM408_25260 PF08264 Anticodon-binding domain of tRNA KM408_25260 PF09334 tRNA synthetases class I (M) KM408_25270 PF02743 Cache domain KM408_25270 PF00672 HAMP domain KM408_25270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM408_25275 PF01883 Iron-sulfur cluster assembly protein KM408_25280 PF02868 Thermolysin metallopeptidase, alpha-helical domain KM408_25280 PF01447 Thermolysin metallopeptidase, catalytic domain KM408_25280 PF07504 Fungalysin/Thermolysin Propeptide Motif KM408_25280 PF03413 Peptidase propeptide and YPEB domain KM408_25285 PF17954 Quercetinase C-terminal cupin domain KM408_25285 PF02678 Pirin KM408_25290 PF01047 MarR family KM408_25300 PF00999 Sodium/hydrogen exchanger family KM408_25305 PF02080 TrkA-C domain KM408_25310 PF01235 Sodium:alanine symporter family KM408_25315 PF00210 Ferritin-like domain KM408_25330 PF03641 Possible lysine decarboxylase KM408_25340 PF00210 Ferritin-like domain KM408_25350 PF01773 Na+ dependent nucleoside transporter N-terminus KM408_25350 PF07662 Na+ dependent nucleoside transporter C-terminus KM408_25355 PF01773 Na+ dependent nucleoside transporter N-terminus KM408_25355 PF07662 Na+ dependent nucleoside transporter C-terminus KM408_25360 PF01235 Sodium:alanine symporter family KM408_25365 PF01235 Sodium:alanine symporter family KM408_25370 PF13460 NAD(P)H-binding KM408_25385 PF00248 Aldo/keto reductase family KM408_25390 PF07690 Major Facilitator Superfamily KM408_25395 PF01638 HxlR-like helix-turn-helix KM408_25400 PF07849 Protein of unknown function (DUF1641) KM408_25405 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_25410 PF00579 tRNA synthetases class I (W and Y) KM408_25410 PF01479 S4 domain KM408_25415 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KM408_25415 PF01565 FAD binding domain KM408_25425 PF00672 HAMP domain KM408_25425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM408_25425 PF17202 Single cache domain 3 KM408_25435 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM408_25440 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KM408_25455 PF13302 Acetyltransferase (GNAT) domain KM408_25460 PF06146 Phosphate-starvation-inducible E KM408_25475 PF00005 ABC transporter KM408_25480 PF01032 FecCD transport family KM408_25485 PF01032 FecCD transport family KM408_25495 PF00486 Transcriptional regulatory protein, C terminal KM408_25495 PF00072 Response regulator receiver domain KM408_25505 PF01668 SmpB protein KM408_25510 PF00773 RNB domain KM408_25510 PF17876 Cold shock domain KM408_25510 PF08206 Ribonuclease B OB domain KM408_25510 PF00575 S1 RNA binding domain KM408_25515 PF12146 Serine aminopeptidase, S33 KM408_25520 PF03840 Preprotein translocase SecG subunit KM408_25525 PF04172 LrgB-like family KM408_25530 PF03788 LrgA family KM408_25535 PF01156 Inosine-uridine preferring nucleoside hydrolase KM408_25625 PF04860 Phage portal protein KM408_25650 PF02899 Phage integrase, N-terminal SAM-like domain KM408_25650 PF00589 Phage integrase family KM408_25655 PF03952 Enolase, N-terminal domain KM408_25655 PF00113 Enolase, C-terminal TIM barrel domain KM408_25660 PF01676 Metalloenzyme superfamily KM408_25660 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KM408_25665 PF00121 Triosephosphate isomerase KM408_25670 PF00162 Phosphoglycerate kinase KM408_25675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KM408_25675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KM408_25680 PF04198 Putative sugar-binding domain KM408_25690 PF04552 Sigma-54, DNA binding domain KM408_25690 PF00309 Sigma-54 factor, Activator interacting domain (AID) KM408_25690 PF04963 Sigma-54 factor, core binding domain KM408_25710 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM408_25715 PF07451 Stage V sporulation protein AD (SpoVAD) KM408_25720 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KM408_25730 PF04239 Protein of unknown function (DUF421) KM408_25735 PF00574 Clp protease KM408_25740 PF00381 PTS HPr component phosphorylation site KM408_25745 PF02650 WhiA C-terminal HTH domain KM408_25745 PF14527 WhiA LAGLIDADG-like domain KM408_25745 PF10298 WhiA N-terminal LAGLIDADG-like domain KM408_25750 PF01933 Uncharacterised protein family UPF0052 KM408_25755 PF03668 P-loop ATPase protein family KM408_25760 PF00293 NUDIX domain KM408_25770 PF07992 Pyridine nucleotide-disulphide oxidoreductase KM408_25780 PF14602 Hexapeptide repeat of succinyl-transferase KM408_25785 PF13419 Haloacid dehalogenase-like hydrolase KM408_25790 PF01790 Prolipoprotein diacylglyceryl transferase KM408_25795 PF07475 HPr Serine kinase C-terminal domain KM408_25795 PF02603 HPr Serine kinase N terminus KM408_25800 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KM408_25810 PF00005 ABC transporter KM408_25810 PF17755 UvrA DNA-binding domain KM408_25810 PF17760 UvrA interaction domain KM408_25815 PF00271 Helicase conserved C-terminal domain KM408_25815 PF04851 Type III restriction enzyme, res subunit KM408_25815 PF12344 Ultra-violet resistance protein B KM408_25815 PF17757 UvrB interaction domain KM408_25815 PF02151 UvrB/uvrC motif KM408_25820 PF12323 Helix-turn-helix domain KM408_25820 PF07282 Putative transposase DNA-binding domain KM408_25820 PF01385 Probable transposase KM408_25835 PF07739 TipAS antibiotic-recognition domain KM408_25835 PF13411 MerR HTH family regulatory protein KM408_25860 PF03601 Conserved hypothetical protein 698 KM408_25865 PF03466 LysR substrate binding domain KM408_25865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM408_25870 PF13411 MerR HTH family regulatory protein KM408_25875 PF03358 NADPH-dependent FMN reductase KM408_25880 PF12848 ABC transporter KM408_25880 PF00005 ABC transporter KM408_25890 PF00664 ABC transporter transmembrane region KM408_25890 PF00005 ABC transporter KM408_25895 PF17820 PDZ domain KM408_25900 PF03572 Peptidase family S41 KM408_25900 PF01471 Putative peptidoglycan binding domain KM408_25900 PF17820 PDZ domain KM408_25905 PF18075 FtsX extracellular domain KM408_25905 PF02687 FtsX-like permease family KM408_25910 PF00005 ABC transporter KM408_25915 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KM408_25925 PF01043 SecA preprotein cross-linking domain KM408_25925 PF02810 SEC-C motif KM408_25925 PF07516 SecA Wing and Scaffold domain KM408_25925 PF07517 SecA DEAD-like domain KM408_25930 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KM408_25930 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KM408_25935 PF00313 'Cold-shock' DNA-binding domain KM408_25945 PF04851 Type III restriction enzyme, res subunit KM408_25945 PF00271 Helicase conserved C-terminal domain KM408_25950 PF01476 LysM domain KM408_25950 PF00877 NlpC/P60 family KM408_25955 PF01638 HxlR-like helix-turn-helix KM408_25960 PF02645 Uncharacterised protein, DegV family COG1307 KM408_25965 PF09186 Domain of unknown function (DUF1949) KM408_25965 PF01205 Uncharacterized protein family UPF0029 KM408_25970 PF03816 Cell envelope-related transcriptional attenuator domain KM408_25975 PF02350 UDP-N-acetylglucosamine 2-epimerase KM408_25980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM408_25980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM408_25980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM408_25985 PF00953 Glycosyl transferase family 4 KM408_25990 PF01522 Polysaccharide deacetylase KM408_25995 PF00874 PRD domain KM408_25995 PF03610 PTS system fructose IIA component KM408_25995 PF00158 Sigma-54 interaction domain KM408_26005 PF02417 Chromate transporter KM408_26010 PF04794 YdjC-like protein KM408_26015 PF02056 Family 4 glycosyl hydrolase KM408_26015 PF11975 Family 4 glycosyl hydrolase C-terminal domain KM408_26020 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM408_26025 PF02378 Phosphotransferase system, EIIC KM408_26030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM408_26040 PF02675 S-adenosylmethionine decarboxylase KM408_26045 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KM408_26050 PF02378 Phosphotransferase system, EIIC KM408_26055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KM408_26060 PF00375 Sodium:dicarboxylate symporter family KM408_26070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KM408_26080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KM408_26080 PF03466 LysR substrate binding domain KM408_26100 PF01654 Cytochrome bd terminal oxidase subunit I KM408_26105 PF02322 Cytochrome bd terminal oxidase subunit II KM408_26110 PF02040 Arsenical pump membrane protein KM408_26115 PF01964 Radical SAM ThiC family KM408_26115 PF13667 ThiC-associated domain KM408_26130 PF09988 Uncharacterized metal-binding protein (DUF2227) KM408_26140 PF00884 Sulfatase KM408_26145 PF01063 Amino-transferase class IV KM408_26155 PF01773 Na+ dependent nucleoside transporter N-terminus KM408_26155 PF07662 Na+ dependent nucleoside transporter C-terminus KM408_26170 PF02028 BCCT, betaine/carnitine/choline family transporter KM408_26175 PF06725 3D domain KM408_26175 PF01476 LysM domain KM408_26200 PF04434 SWIM zinc finger KM408_26205 PF00176 SNF2 family N-terminal domain KM408_26205 PF00271 Helicase conserved C-terminal domain KM408_26205 PF12419 SNF2 Helicase protein KM408_26235 PF04542 Sigma-70 region 2 KM408_26235 PF04545 Sigma-70, region 4 KM408_26240 PF04893 Yip1 domain KM408_26245 PF02687 FtsX-like permease family KM408_26245 PF12704 MacB-like periplasmic core domain KM408_26250 PF00005 ABC transporter KM408_26270 PF07690 Major Facilitator Superfamily KM408_26285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_26285 PF00512 His Kinase A (phospho-acceptor) domain KM408_26285 PF16736 Single Cache-like KM408_26285 PF00989 PAS fold KM408_26290 PF00072 Response regulator receiver domain KM408_26290 PF00486 Transcriptional regulatory protein, C terminal KM408_26295 PF16363 GDP-mannose 4,6 dehydratase KM408_26300 PF03816 Cell envelope-related transcriptional attenuator domain KM408_26305 PF07977 FabA-like domain KM408_26310 PF02350 UDP-N-acetylglucosamine 2-epimerase KM408_26315 PF08239 Bacterial SH3 domain KM408_26315 PF00005 ABC transporter KM408_26320 PF01061 ABC-2 type transporter KM408_26325 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM408_26325 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM408_26325 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM408_26370 PF12116 Stage III sporulation protein D KM408_26385 PF01551 Peptidase family M23 KM408_26395 PF00005 ABC transporter KM408_26405 PF08486 Stage II sporulation protein KM408_26410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM408_26420 PF06612 Protein of unknown function (DUF1146) KM408_26425 PF00361 Proton-conducting membrane transporter KM408_26430 PF00361 Proton-conducting membrane transporter KM408_26435 PF00361 Proton-conducting membrane transporter KM408_26435 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KM408_26435 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus KM408_26440 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KM408_26445 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 KM408_26455 PF00146 NADH dehydrogenase KM408_26460 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit KM408_26465 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit KM408_26470 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit KM408_26475 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 KM408_26480 PF00563 EAL domain KM408_26480 PF00990 Diguanylate cyclase, GGDEF domain KM408_26480 PF03707 Bacterial signalling protein N terminal repeat KM408_26495 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KM408_26495 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KM408_26500 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM408_26500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM408_26505 PF00231 ATP synthase KM408_26510 PF02874 ATP synthase alpha/beta family, beta-barrel domain KM408_26510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM408_26510 PF00306 ATP synthase alpha/beta chain, C terminal domain KM408_26515 PF00213 ATP synthase delta (OSCP) subunit KM408_26520 PF00430 ATP synthase B/B' CF(0) KM408_26525 PF00137 ATP synthase subunit C KM408_26530 PF00119 ATP synthase A chain KM408_26535 PF03899 ATP synthase I chain KM408_26555 PF00464 Serine hydroxymethyltransferase KM408_26560 PF04260 Protein of unknown function (DUF436) KM408_26565 PF02502 Ribose/Galactose Isomerase KM408_26570 PF01451 Low molecular weight phosphotyrosine protein phosphatase KM408_26575 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KM408_26580 PF07681 DoxX KM408_26585 PF01613 Flavin reductase like domain KM408_26595 PF02659 Putative manganese efflux pump KM408_26600 PF01300 Telomere recombination KM408_26600 PF03481 Putative GTP-binding controlling metal-binding KM408_26610 PF09551 Stage II sporulation protein R (spore_II_R) KM408_26615 PF17827 PrmC N-terminal domain KM408_26615 PF13847 Methyltransferase domain KM408_26620 PF03462 PCRF domain KM408_26620 PF00472 RF-1 domain KM408_26625 PF00265 Thymidine kinase KM408_26630 PF01197 Ribosomal protein L31 KM408_26635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KM408_26635 PF07498 Rho termination factor, N-terminal domain KM408_26635 PF07497 Rho termination factor, RNA-binding domain KM408_26640 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KM408_26645 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KM408_26650 PF01116 Fructose-bisphosphate aldolase class-II KM408_26655 PF00072 Response regulator receiver domain KM408_26660 PF10740 Domain of unknown function (DUF2529) KM408_26665 PF00117 Glutamine amidotransferase class-I KM408_26665 PF06418 CTP synthase N-terminus KM408_26670 PF05066 HB1, ASXL, restriction endonuclease HTH domain KM408_26680 PF02770 Acyl-CoA dehydrogenase, middle domain KM408_26680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM408_26680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM408_26685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KM408_26685 PF02770 Acyl-CoA dehydrogenase, middle domain KM408_26685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KM408_26690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KM408_26690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KM408_26695 PF02803 Thiolase, C-terminal domain KM408_26695 PF00108 Thiolase, N-terminal domain KM408_26700 PF02754 Cysteine-rich domain KM408_26700 PF13183 4Fe-4S dicluster domain KM408_26705 PF13091 PLD-like domain KM408_26710 PF03851 UV-endonuclease UvdE KM408_26715 PF00990 Diguanylate cyclase, GGDEF domain KM408_26715 PF00563 EAL domain KM408_26715 PF03707 Bacterial signalling protein N terminal repeat KM408_26735 PF00196 Bacterial regulatory proteins, luxR family KM408_26735 PF00072 Response regulator receiver domain KM408_26740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_26740 PF07730 Histidine kinase KM408_26750 PF00005 ABC transporter KM408_26755 PF00557 Metallopeptidase family M24 KM408_26765 PF02225 PA domain KM408_26765 PF04389 Peptidase family M28 KM408_26785 PF04542 Sigma-70 region 2 KM408_26785 PF08281 Sigma-70, region 4 KM408_26790 PF03485 Arginyl tRNA synthetase N terminal domain KM408_26790 PF05746 DALR anticodon binding domain KM408_26790 PF00750 tRNA synthetases class I (R) KM408_26795 PF09148 Domain of unknown function (DUF1934) KM408_26800 PF02016 LD-carboxypeptidase N-terminal domain KM408_26800 PF17676 LD-carboxypeptidase C-terminal domain KM408_26815 PF00491 Arginase family KM408_26820 PF17284 Spermidine synthase tetramerisation domain KM408_26825 PF07690 Major Facilitator Superfamily KM408_26830 PF13411 MerR HTH family regulatory protein KM408_26835 PF03009 Glycerophosphoryl diester phosphodiesterase family KM408_26840 PF00912 Transglycosylase KM408_26840 PF00905 Penicillin binding protein transpeptidase domain KM408_26845 PF08741 YwhD family KM408_26850 PF02163 Peptidase family M50 KM408_26855 PF01361 Tautomerase enzyme KM408_26860 PF01966 HD domain KM408_26865 PF01497 Periplasmic binding protein KM408_26870 PF00005 ABC transporter KM408_26875 PF01032 FecCD transport family KM408_26885 PF07293 Protein of unknown function (DUF1450) KM408_26900 PF03099 Biotin/lipoate A/B protein ligase family KM408_26905 PF01515 Phosphate acetyl/butaryl transferase KM408_26910 PF06778 Chlorite dismutase KM408_26915 PF00768 D-alanyl-D-alanine carboxypeptidase KM408_26915 PF07943 Penicillin-binding protein 5, C-terminal domain KM408_26920 PF07486 Cell Wall Hydrolase KM408_26925 PF09671 Spore coat protein (Spore_GerQ) KM408_26930 PF04241 Protein of unknown function (DUF423) KM408_26940 PF07885 Ion channel KM408_26940 PF02254 TrkA-N domain KM408_26945 PF00860 Permease family KM408_26955 PF12823 Domain of unknown function (DUF3817) KM408_26960 PF03167 Uracil DNA glycosylase superfamily KM408_26965 PF12679 ABC-2 family transporter protein KM408_26970 PF00005 ABC transporter KM408_26975 PF13472 GDSL-like Lipase/Acylhydrolase family KM408_26980 PF00356 Bacterial regulatory proteins, lacI family KM408_26980 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KM408_26990 PF03447 Homoserine dehydrogenase, NAD binding domain KM408_26990 PF00742 Homoserine dehydrogenase KM408_26990 PF01842 ACT domain KM408_26995 PF04204 Homoserine O-succinyltransferase KM408_27000 PF01053 Cys/Met metabolism PLP-dependent enzyme KM408_27010 PF13419 Haloacid dehalogenase-like hydrolase KM408_27015 PF00027 Cyclic nucleotide-binding domain KM408_27020 PF02525 Flavodoxin-like fold KM408_27025 PF00072 Response regulator receiver domain KM408_27025 PF00196 Bacterial regulatory proteins, luxR family KM408_27035 PF08543 Phosphomethylpyrimidine kinase KM408_27040 PF07694 5TMR of 5TMR-LYT KM408_27040 PF00990 Diguanylate cyclase, GGDEF domain KM408_27045 PF04328 Selenoprotein, putative KM408_27050 PF13722 5TM C-terminal transporter carbon starvation CstA KM408_27050 PF02554 Carbon starvation protein CstA KM408_27055 PF04397 LytTr DNA-binding domain KM408_27055 PF00072 Response regulator receiver domain KM408_27060 PF07690 Major Facilitator Superfamily KM408_27065 PF03808 Glycosyl transferase WecB/TagA/CpsF family KM408_27080 PF03458 UPF0126 domain KM408_27085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KM408_27095 PF03061 Thioesterase superfamily KM408_27105 PF00535 Glycosyl transferase family 2 KM408_27110 PF00005 ABC transporter KM408_27110 PF12848 ABC transporter KM408_27130 PF00535 Glycosyl transferase family 2 KM408_27135 PF00440 Bacterial regulatory proteins, tetR family KM408_27140 PF00873 AcrB/AcrD/AcrF family KM408_27145 PF01641 SelR domain KM408_27145 PF01625 Peptide methionine sulfoxide reductase KM408_27150 PF01594 AI-2E family transporter KM408_27155 PF04172 LrgB-like family KM408_27160 PF03788 LrgA family KM408_27165 PF00072 Response regulator receiver domain KM408_27165 PF04397 LytTr DNA-binding domain KM408_27170 PF07694 5TMR of 5TMR-LYT KM408_27170 PF13492 GAF domain KM408_27170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_27170 PF06580 Histidine kinase KM408_27175 PF07690 Major Facilitator Superfamily KM408_27180 PF02028 BCCT, betaine/carnitine/choline family transporter KM408_27185 PF02898 Nitric oxide synthase, oxygenase domain KM408_27190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KM408_27190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KM408_27200 PF02293 AmiS/UreI family transporter KM408_27210 PF16363 GDP-mannose 4,6 dehydratase KM408_27215 PF03006 Haemolysin-III related KM408_27225 PF00270 DEAD/DEAH box helicase KM408_27225 PF00271 Helicase conserved C-terminal domain KM408_27225 PF03880 DbpA RNA binding domain KM408_27235 PF00478 IMP dehydrogenase / GMP reductase domain KM408_27240 PF08439 Oligopeptidase F KM408_27240 PF01432 Peptidase family M3 KM408_27250 PF02590 Predicted SPOUT methyltransferase KM408_27260 PF13180 PDZ domain KM408_27265 PF00753 Metallo-beta-lactamase superfamily KM408_27270 PF09648 YycH protein KM408_27275 PF07435 YycH protein KM408_27280 PF00672 HAMP domain KM408_27280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KM408_27280 PF00512 His Kinase A (phospho-acceptor) domain KM408_27280 PF13426 PAS domain KM408_27285 PF00072 Response regulator receiver domain KM408_27285 PF00486 Transcriptional regulatory protein, C terminal KM408_27310 PF00709 Adenylosuccinate synthetase KM408_27315 PF03796 DnaB-like helicase C terminal domain KM408_27315 PF00772 DnaB-like helicase N terminal domain KM408_27320 PF01281 Ribosomal protein L9, N-terminal domain KM408_27320 PF03948 Ribosomal protein L9, C-terminal domain KM408_27325 PF02272 DHHA1 domain KM408_27325 PF01368 DHH family KM408_27330 PF09991 Predicted membrane protein (DUF2232) KM408_27335 PF01084 Ribosomal protein S18 KM408_27340 PF00436 Single-strand binding protein family KM408_27345 PF01250 Ribosomal protein S6 KM408_27350 PF01926 50S ribosome-binding GTPase KM408_27350 PF06071 Protein of unknown function (DUF933) KM408_27355 PF06107 Bacterial protein of unknown function (DUF951) KM408_27360 PF00924 Mechanosensitive ion channel KM408_27365 PF06866 Protein of unknown function (DUF1256) KM408_27370 PF17762 HTH domain found in ParB protein KM408_27370 PF02195 ParB-like nuclease domain KM408_27375 PF13614 AAA domain KM408_27380 PF17762 HTH domain found in ParB protein KM408_27380 PF02195 ParB-like nuclease domain KM408_27385 PF02527 rRNA small subunit methyltransferase G KM408_27390 PF13932 GidA associated domain KM408_27390 PF01134 Glucose inhibited division protein A KM408_27395 PF12631 MnmE helical domain KM408_27395 PF01926 50S ribosome-binding GTPase KM408_27395 PF10396 GTP-binding protein TrmE N-terminus KM408_27400 PF14804 Jag N-terminus KM408_27400 PF01424 R3H domain KM408_27405 PF02096 60Kd inner membrane protein KM408_27410 PF00825 Ribonuclease P KM408_27415 PF00468 Ribosomal protein L34 KM408_27430 PF08378 Nuclease-related domain KM408_27470 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM408_27550 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KM408_27600 PF13427 Domain of unknown function (DUF4111) KM408_27600 PF18765 Polymerase beta, Nucleotidyltransferase KM408_27610 PF01609 Transposase DDE domain KM408_27615 PF01609 Transposase DDE domain KM408_27655 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KM408_27655 PF17854 FtsK alpha domain KM408_27655 PF09397 Ftsk gamma domain KM408_27655 PF01580 FtsK/SpoIIIE family KM408_27670 PF00091 Tubulin/FtsZ family, GTPase domain KM408_27745 PF00437 Type II/IV secretion system protein KM408_27865 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) KM408_27880 PF04235 Protein of unknown function (DUF418) KM408_27900 PF00395 S-layer homology domain KM408_27905 PF01569 PAP2 superfamily KM408_27920 PF00535 Glycosyl transferase family 2 KM408_27925 PF00483 Nucleotidyl transferase KM408_27930 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KM408_27930 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KM408_27930 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KM408_27970 PF03497 Anthrax toxin LF subunit KM408_27970 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM408_27990 PF00874 PRD domain KM408_27990 PF05043 Mga helix-turn-helix domain KM408_27990 PF08279 HTH domain KM408_27995 PF09385 Histidine kinase N terminal KM408_28010 PF13700 Domain of unknown function (DUF4158) KM408_28010 PF01526 Tn3 transposase DDE domain KM408_28015 PF02796 Helix-turn-helix domain of resolvase KM408_28015 PF00239 Resolvase, N terminal domain KM408_28020 PF03845 Spore germination protein KM408_28025 PF03323 Bacillus/Clostridium GerA spore germination protein KM408_28030 PF05504 Spore germination B3/ GerAC like, C-terminal KM408_28045 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 KM408_28045 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain KM408_28045 PF07691 PA14 domain KM408_28045 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 KM408_28050 PF01022 Bacterial regulatory protein, arsR family KM408_28075 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain KM408_28075 PF09156 Anthrax toxin lethal factor, middle domain KM408_28095 PF18277 AbrB C-terminal domain KM408_28095 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KM408_28105 PF00589 Phage integrase family KM408_28105 PF02899 Phage integrase, N-terminal SAM-like domain KM408_28135 PF14436 Bacterial EndoU nuclease KM408_28135 PF04740 LXG domain of WXG superfamily KM408_28160 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KM408_28170 PF00589 Phage integrase family KM408_28195 PF18801 response regulator aspartate phosphatase H, N terminal KM408_28205 PF17209 Hfq protein KM408_28210 PF01022 Bacterial regulatory protein, arsR family KM408_28215 PF02600 Disulfide bond formation protein DsbB KM408_28230 PF00565 Staphylococcal nuclease homologue KM408_28235 PF01131 DNA topoisomerase KM408_28235 PF01751 Toprim domain KM408_28235 PF13342 C-terminal repeat of topoisomerase KM408_28245 PF08708 Primase C terminal 1 (PriCT-1) KM408_28265 PF17362 Family of unknown function KM408_28280 PF17631 Family of unknown function (DUF5512) KM408_28320 PF00437 Type II/IV secretion system protein KM408_28350 PF04956 TrbC/VIRB2 family KM408_28365 PF12696 TraM recognition site of TraD and TraG KM408_28400 PF00877 NlpC/P60 family KM408_28410 PF17632 Family of unknown function (DUF5513) KM408_28435 PF17633 Family of unknown function (DUF5514) KM408_28440 PF17630 Family of unknown function (DUF5511) KM408_28445 PF18840 Large polyvalent protein associated domain 25 KM408_28460 PF13154 Protein of unknown function (DUF3991) KM408_28465 PF01131 DNA topoisomerase KM408_28465 PF01751 Toprim domain KM408_28505 PF17443 Uncharacterized protein pXO2-72 KM408_28525 PF11798 IMS family HHH motif KM408_28525 PF00817 impB/mucB/samB family KM408_28525 PF11799 impB/mucB/samB family C-terminal domain KM408_28530 PF13152 Protein of unknown function (DUF3967) KM408_28530 PF13411 MerR HTH family regulatory protein KM408_28535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KM408_28565 PF00874 PRD domain KM408_28565 PF05043 Mga helix-turn-helix domain KM408_28565 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM408_28575 PF01810 LysE type translocator KM408_28580 PF00874 PRD domain KM408_28580 PF05043 Mga helix-turn-helix domain KM408_28580 PF08279 HTH domain KM408_28585 PF00874 PRD domain KM408_28585 PF05043 Mga helix-turn-helix domain KM408_28585 PF08279 HTH domain KM408_28590 PF09385 Histidine kinase N terminal KM408_28600 PF10502 Signal peptidase, peptidase S26 KM408_28615 PF01022 Bacterial regulatory protein, arsR family KM408_28625 PF08245 Mur ligase middle domain KM408_28630 PF14102 Capsule biosynthesis CapC KM408_28635 PF09587 Bacterial capsule synthesis protein PGA_cap KM408_28655 PF08280 M protein trans-acting positive regulator (MGA) HTH domain KM408_28655 PF05043 Mga helix-turn-helix domain KM408_28665 PF01569 PAP2 superfamily KM408_28675 PF00440 Bacterial regulatory proteins, tetR family KM408_28680 PF04463 Protein of unknown function (DUF523) KM408_28685 PF02517 CPBP intramembrane metalloprotease KM408_28690 PF01906 Putative heavy-metal-binding KM408_28710 PF01520 N-acetylmuramoyl-L-alanine amidase KM408_28710 PF00395 S-layer homology domain KM408_28725 PF13614 AAA domain