locus-tag class description BF25_1 PF01931 Protein of unknown function DUF84 BF25_100 PF00391 PEP-utilising enzyme, mobile domain BF25_100 PF00224 Pyruvate kinase, barrel domain BF25_100 PF02887 Pyruvate kinase, alpha/beta domain BF25_1000 PF10628 Outer spore coat protein E (CotE) BF25_1001 PF05190 MutS family domain IV BF25_1001 PF05192 MutS domain III BF25_1001 PF05188 MutS domain II BF25_1001 PF01624 MutS domain I BF25_1001 PF00488 MutS domain V BF25_1002 PF01119 DNA mismatch repair protein, C-terminal domain BF25_1002 PF08676 MutL C terminal dimerisation domain BF25_1003 PF00005 ABC transporter BF25_1006 PF00486 Transcriptional regulatory protein, C terminal BF25_1006 PF00072 Response regulator receiver domain BF25_1007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_1007 PF00512 His Kinase A (phospho-acceptor) domain BF25_1008 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BF25_101 PF04186 FxsA cytoplasmic membrane protein BF25_1010 PF00350 Dynamin family BF25_1011 PF00884 Sulfatase BF25_1012 PF03275 UDP-galactopyranose mutase BF25_1013 PF07486 Cell Wall Hydrolase BF25_1014 PF00082 Subtilase family BF25_1015 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BF25_1017 PF02585 GlcNAc-PI de-N-acetylase BF25_1018 PF00364 Biotin-requiring enzyme BF25_1018 PF00561 alpha/beta hydrolase fold BF25_1019 PF00155 Aminotransferase class I and II BF25_1019 PF00392 Bacterial regulatory proteins, gntR family BF25_102 PF01594 AI-2E family transporter BF25_1020 PF03788 LrgA family BF25_1021 PF04172 LrgB-like family BF25_1022 PF10787 Uncharacterised protein from bacillus cereus group BF25_1024 PF00563 EAL domain BF25_1024 PF00990 Diguanylate cyclase, GGDEF domain BF25_1024 PF03707 Bacterial signalling protein N terminal repeat BF25_1025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_1026 PF00561 alpha/beta hydrolase fold BF25_103 PF04284 Protein of unknown function (DUF441) BF25_1030 PF01546 Peptidase family M20/M25/M40 BF25_1030 PF07687 Peptidase dimerisation domain BF25_1031 PF00730 HhH-GPD superfamily base excision DNA repair protein BF25_1031 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BF25_1032 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BF25_1032 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BF25_1033 PF02805 Metal binding domain of Ada BF25_1033 PF12833 Helix-turn-helix domain BF25_1034 PF03372 Endonuclease/Exonuclease/phosphatase family BF25_1036 PF01497 Periplasmic binding protein BF25_1037 PF01032 FecCD transport family BF25_1038 PF01032 FecCD transport family BF25_1039 PF00005 ABC transporter BF25_104 PF00285 Citrate synthase, C-terminal domain BF25_1040 PF00756 Putative esterase BF25_1042 PF02583 Metal-sensitive transcriptional repressor BF25_1043 PF00403 Heavy-metal-associated domain BF25_1044 PF00403 Heavy-metal-associated domain BF25_1045 PF00216 Bacterial DNA-binding protein BF25_1046 PF01226 Formate/nitrite transporter BF25_1047 PF10518 TAT (twin-arginine translocation) pathway signal sequence BF25_1047 PF00149 Calcineurin-like phosphoesterase BF25_1049 PF00704 Glycosyl hydrolases family 18 BF25_1049 PF00041 Fibronectin type III domain BF25_105 PF00180 Isocitrate/isopropylmalate dehydrogenase BF25_1050 PF00324 Amino acid permease BF25_1053 PF04238 Protein of unknown function (DUF420) BF25_1054 PF00465 Iron-containing alcohol dehydrogenase BF25_1055 PF00465 Iron-containing alcohol dehydrogenase BF25_1056 PF08220 DeoR-like helix-turn-helix domain BF25_1056 PF00455 DeoR C terminal sensor domain BF25_1057 PF00294 pfkB family carbohydrate kinase BF25_1058 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF25_1058 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF25_1059 PF01476 LysM domain BF25_1059 PF06725 3D domain BF25_106 PF00056 lactate/malate dehydrogenase, NAD binding domain BF25_106 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF25_1062 PF17209 Hfq protein BF25_1066 PF00004 ATPase family associated with various cellular activities (AAA) BF25_1066 PF17866 AAA lid domain BF25_1067 PF03458 UPF0126 domain BF25_1068 PF16360 GTP-binding GTPase Middle Region BF25_1068 PF13167 GTP-binding GTPase N-terminal BF25_1068 PF01926 50S ribosome-binding GTPase BF25_1069 PF13167 GTP-binding GTPase N-terminal BF25_1069 PF16360 GTP-binding GTPase Middle Region BF25_1069 PF01926 50S ribosome-binding GTPase BF25_1070 PF06838 Methionine gamma-lyase BF25_1071 PF13411 MerR HTH family regulatory protein BF25_1072 PF00120 Glutamine synthetase, catalytic domain BF25_1072 PF03951 Glutamine synthetase, beta-Grasp domain BF25_1073 PF00589 Phage integrase family BF25_1073 PF02899 Phage integrase, N-terminal SAM-like domain BF25_1077 PF01381 Helix-turn-helix BF25_109 PF00072 Response regulator receiver domain BF25_109 PF00486 Transcriptional regulatory protein, C terminal BF25_1092 PF00145 C-5 cytosine-specific DNA methylase BF25_1093 PF02511 Thymidylate synthase complementing protein BF25_110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_110 PF00989 PAS fold BF25_110 PF16736 Single Cache-like BF25_110 PF00512 His Kinase A (phospho-acceptor) domain BF25_1101 PF08281 Sigma-70, region 4 BF25_111 PF01367 5'-3' exonuclease, C-terminal SAM fold BF25_111 PF00476 DNA polymerase family A BF25_111 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BF25_112 PF06827 Zinc finger found in FPG and IleRS BF25_112 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BF25_112 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BF25_113 PF02659 Putative manganese efflux pump BF25_1133 PF05105 Bacteriophage holin family BF25_1134 PF01510 N-acetylmuramoyl-L-alanine amidase BF25_1134 PF01476 LysM domain BF25_1134 PF01471 Putative peptidoglycan binding domain BF25_114 PF01121 Dephospho-CoA kinase BF25_1142 PF03551 Transcriptional regulator PadR-like family BF25_1145 PF00717 Peptidase S24-like BF25_1145 PF01726 LexA DNA binding domain BF25_1146 PF00239 Resolvase, N terminal domain BF25_1147 PF05979 Bacterial protein of unknown function (DUF896) BF25_1148 PF02872 5'-nucleotidase, C-terminal domain BF25_1148 PF00149 Calcineurin-like phosphoesterase BF25_115 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BF25_115 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF25_1151 PF00005 ABC transporter BF25_1152 PF00528 Binding-protein-dependent transport system inner membrane component BF25_1153 PF00528 Binding-protein-dependent transport system inner membrane component BF25_1154 PF07282 Putative transposase DNA-binding domain BF25_1154 PF01385 Probable transposase BF25_1154 PF12323 Helix-turn-helix domain BF25_1155 PF00456 Transketolase, thiamine diphosphate binding domain BF25_1155 PF02780 Transketolase, C-terminal domain BF25_1155 PF02779 Transketolase, pyrimidine binding domain BF25_1156 PF10747 Sporulation inhibitor of replication protein SirA BF25_1157 PF03672 Uncharacterised protein family (UPF0154) BF25_1158 PF00664 ABC transporter transmembrane region BF25_1158 PF00005 ABC transporter BF25_1159 PF00005 ABC transporter BF25_1159 PF00664 ABC transporter transmembrane region BF25_116 PF02675 S-adenosylmethionine decarboxylase BF25_1162 PF01471 Putative peptidoglycan binding domain BF25_1162 PF01510 N-acetylmuramoyl-L-alanine amidase BF25_1164 PF01925 Sulfite exporter TauE/SafE BF25_1166 PF00293 NUDIX domain BF25_1166 PF13344 Haloacid dehalogenase-like hydrolase BF25_1167 PF04172 LrgB-like family BF25_1168 PF03788 LrgA family BF25_1169 PF03466 LysR substrate binding domain BF25_1169 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF25_117 PF03477 ATP cone domain BF25_1171 PF02683 Cytochrome C biogenesis protein transmembrane region BF25_1172 PF07301 Protein of unknown function (DUF1453) BF25_1178 PF11084 Protein of unknown function (DUF2621) BF25_118 PF07261 Replication initiation and membrane attachment BF25_1182 PF01209 ubiE/COQ5 methyltransferase family BF25_1183 PF09021 HutP BF25_1184 PF00221 Aromatic amino acid lyase BF25_1185 PF01175 Urocanase Rossmann-like domain BF25_1185 PF17391 Urocanase N-terminal domain BF25_1185 PF17392 Urocanase C-terminal domain BF25_1186 PF01979 Amidohydrolase family BF25_1187 PF00491 Arginase family BF25_1188 PF02559 CarD-like/TRCF domain BF25_1189 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BF25_119 PF07319 Primosomal protein DnaI N-terminus BF25_119 PF01695 IstB-like ATP binding protein BF25_1190 PF01645 Conserved region in glutamate synthase BF25_1191 PF00474 Sodium:solute symporter family BF25_1192 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_1193 PF01738 Dienelactone hydrolase family BF25_1194 PF00512 His Kinase A (phospho-acceptor) domain BF25_1194 PF13426 PAS domain BF25_1194 PF13188 PAS domain BF25_1194 PF00989 PAS fold BF25_1194 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_1196 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF25_1196 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF25_120 PF08812 YtxC-like family BF25_1202 PF05532 CsbD-like BF25_1205 PF00501 AMP-binding enzyme BF25_1205 PF13193 AMP-binding enzyme C-terminal domain BF25_1206 PF02632 BioY family BF25_1207 PF13193 AMP-binding enzyme C-terminal domain BF25_1207 PF00501 AMP-binding enzyme BF25_1208 PF00108 Thiolase, N-terminal domain BF25_1208 PF02803 Thiolase, C-terminal domain BF25_121 PF03129 Anticodon binding domain BF25_121 PF02824 TGS domain BF25_121 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF25_121 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF25_1210 PF13344 Haloacid dehalogenase-like hydrolase BF25_1210 PF00293 NUDIX domain BF25_1211 PF02272 DHHA1 domain BF25_1211 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF25_1211 PF01411 tRNA synthetases class II (A) BF25_1213 PF07690 Major Facilitator Superfamily BF25_1216 PF01522 Polysaccharide deacetylase BF25_1218 PF00694 Aconitase C-terminal domain BF25_1218 PF00330 Aconitase family (aconitate hydratase) BF25_1219 PF00005 ABC transporter BF25_1219 PF03412 Peptidase C39 family BF25_1219 PF00664 ABC transporter transmembrane region BF25_122 PF00707 Translation initiation factor IF-3, C-terminal domain BF25_122 PF05198 Translation initiation factor IF-3, N-terminal domain BF25_1221 PF00578 AhpC/TSA family BF25_1222 PF01336 OB-fold nucleic acid binding domain BF25_1222 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF25_1222 PF00929 Exonuclease BF25_1222 PF02811 PHP domain BF25_1222 PF14579 Helix-hairpin-helix motif BF25_1222 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF25_1222 PF11490 DNA polymerase III polC-type N-terminus II BF25_1223 PF13040 Fur-regulated basic protein B BF25_1224 PF08177 Small acid-soluble spore protein N family BF25_1226 PF01476 LysM domain BF25_1226 PF00704 Glycosyl hydrolases family 18 BF25_1227 PF03061 Thioesterase superfamily BF25_1228 PF01521 Iron-sulphur cluster biosynthesis BF25_1229 PF02660 Glycerol-3-phosphate acyltransferase BF25_123 PF01632 Ribosomal protein L35 BF25_1230 PF13597 Anaerobic ribonucleoside-triphosphate reductase BF25_1230 PF03477 ATP cone domain BF25_1231 PF04055 Radical SAM superfamily BF25_1232 PF00072 Response regulator receiver domain BF25_1232 PF00486 Transcriptional regulatory protein, C terminal BF25_1233 PF13180 PDZ domain BF25_1234 PF13380 CoA binding domain BF25_1235 PF01751 Toprim domain BF25_1235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_1235 PF00986 DNA gyrase B subunit, carboxyl terminus BF25_1235 PF00204 DNA gyrase B BF25_1236 PF03989 DNA gyrase C-terminal domain, beta-propeller BF25_1236 PF00521 DNA gyrase/topoisomerase IV, subunit A BF25_1237 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF25_1237 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF25_1239 PF13732 Domain of unknown function (DUF4162) BF25_1239 PF00005 ABC transporter BF25_124 PF00453 Ribosomal protein L20 BF25_1243 PF08281 Sigma-70, region 4 BF25_1243 PF04542 Sigma-70 region 2 BF25_1245 PF03816 Cell envelope-related transcriptional attenuator domain BF25_1248 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_1249 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_1250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_1251 PF08241 Methyltransferase domain BF25_1259 PF03323 Bacillus/Clostridium GerA spore germination protein BF25_126 PF05343 M42 glutamyl aminopeptidase BF25_1261 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF25_1261 PF01568 Molydopterin dinucleotide binding domain BF25_1261 PF00384 Molybdopterin oxidoreductase BF25_1261 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF25_1261 PF00037 4Fe-4S binding domain BF25_1262 PF07849 Protein of unknown function (DUF1641) BF25_1263 PF10057 Uncharacterized conserved protein (DUF2294) BF25_1264 PF02634 FdhD/NarQ family BF25_1265 PF04055 Radical SAM superfamily BF25_1265 PF06463 Molybdenum Cofactor Synthesis C BF25_1266 PF01226 Formate/nitrite transporter BF25_1267 PF00899 ThiF family BF25_1268 PF03454 MoeA C-terminal region (domain IV) BF25_1268 PF03453 MoeA N-terminal region (domain I and II) BF25_1268 PF00994 Probable molybdopterin binding domain BF25_1269 PF02391 MoaE protein BF25_127 PF16859 Tetracyclin repressor-like, C-terminal domain BF25_127 PF00440 Bacterial regulatory proteins, tetR family BF25_1271 PF10609 NUBPL iron-transfer P-loop NTPase BF25_1274 PF06961 Protein of unknown function (DUF1294) BF25_1275 PF00892 EamA-like transporter family BF25_1276 PF02681 Divergent PAP2 family BF25_1277 PF13249 Squalene-hopene cyclase N-terminal domain BF25_1277 PF13243 Squalene-hopene cyclase C-terminal domain BF25_1278 PF14151 YfhD-like protein BF25_1280 PF00171 Aldehyde dehydrogenase family BF25_1282 PF00474 Sodium:solute symporter family BF25_1283 PF01156 Inosine-uridine preferring nucleoside hydrolase BF25_1285 PF00206 Lyase BF25_1285 PF14698 Argininosuccinate lyase C-terminal BF25_1287 PF00106 short chain dehydrogenase BF25_1289 PF00132 Bacterial transferase hexapeptide (six repeats) BF25_129 PF07690 Major Facilitator Superfamily BF25_1291 PF00293 NUDIX domain BF25_1293 PF00258 Flavodoxin BF25_1295 PF00313 'Cold-shock' DNA-binding domain BF25_1299 PF13037 Domain of unknown function (DUF3898) BF25_1299 PF13039 Protein of unknown function (DUF3900) BF25_13 PF02073 Thermophilic metalloprotease (M29) BF25_1301 PF04294 VanW like protein BF25_1302 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_1304 PF02308 MgtC family BF25_1305 PF08453 Peptidase family M9 N-terminal BF25_1305 PF01752 Collagenase BF25_1305 PF18496 Collagenase G catalytic helper subdomain BF25_1306 PF00378 Enoyl-CoA hydratase/isomerase BF25_1307 PF00535 Glycosyl transferase family 2 BF25_1308 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BF25_1309 PF00132 Bacterial transferase hexapeptide (six repeats) BF25_1313 PF01565 FAD binding domain BF25_1313 PF02913 FAD linked oxidases, C-terminal domain BF25_1314 PF01758 Sodium Bile acid symporter family BF25_1316 PF04229 GrpB protein BF25_1317 PF04299 Putative FMN-binding domain BF25_1320 PF18801 response regulator aspartate phosphatase H, N terminal BF25_1321 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BF25_1322 PF08240 Alcohol dehydrogenase GroES-like domain BF25_1322 PF00107 Zinc-binding dehydrogenase BF25_1323 PF01022 Bacterial regulatory protein, arsR family BF25_1324 PF01494 FAD binding domain BF25_1327 PF03009 Glycerophosphoryl diester phosphodiesterase family BF25_1330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF25_1330 PF03466 LysR substrate binding domain BF25_1331 PF07690 Major Facilitator Superfamily BF25_1333 PF00144 Beta-lactamase BF25_1334 PF01432 Peptidase family M3 BF25_1334 PF08439 Oligopeptidase F BF25_1335 PF00797 N-acetyltransferase BF25_1336 PF00128 Alpha amylase, catalytic domain BF25_1336 PF09154 Domain of unknown function (DUF1939) BF25_1338 PF01713 Smr domain BF25_1338 PF00488 MutS domain V BF25_134 PF01966 HD domain BF25_1341 PF08240 Alcohol dehydrogenase GroES-like domain BF25_1341 PF00107 Zinc-binding dehydrogenase BF25_1342 PF03466 LysR substrate binding domain BF25_1342 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF25_1344 PF10901 Protein of unknown function (DUF2690) BF25_1347 PF13170 Protein of unknown function (DUF4003) BF25_1348 PF02567 Phenazine biosynthesis-like protein BF25_1349 PF05675 Protein of unknown function (DUF817) BF25_135 PF14098 Small, acid-soluble spore protein I BF25_1350 PF01032 FecCD transport family BF25_1351 PF01032 FecCD transport family BF25_1353 PF01497 Periplasmic binding protein BF25_1357 PF03600 Citrate transporter BF25_1358 PF08830 Protein of unknown function (DUF1806) BF25_1359 PF02585 GlcNAc-PI de-N-acetylase BF25_136 PF08032 RNA 2'-O ribose methyltransferase substrate binding BF25_136 PF00588 SpoU rRNA Methylase family BF25_1364 PF07690 Major Facilitator Superfamily BF25_1365 PF00324 Amino acid permease BF25_1366 PF08240 Alcohol dehydrogenase GroES-like domain BF25_1366 PF00107 Zinc-binding dehydrogenase BF25_1367 PF08240 Alcohol dehydrogenase GroES-like domain BF25_1367 PF00107 Zinc-binding dehydrogenase BF25_1368 PF00753 Metallo-beta-lactamase superfamily BF25_137 PF01409 tRNA synthetases class II core domain (F) BF25_137 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BF25_1376 PF00144 Beta-lactamase BF25_138 PF03147 Ferredoxin-fold anticodon binding domain BF25_138 PF01588 Putative tRNA binding domain BF25_138 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BF25_138 PF03483 B3/4 domain BF25_138 PF03484 tRNA synthetase B5 domain BF25_1381 PF01471 Putative peptidoglycan binding domain BF25_1381 PF01183 Glycosyl hydrolases family 25 BF25_1382 PF00753 Metallo-beta-lactamase superfamily BF25_1385 PF03063 Prismane/CO dehydrogenase family BF25_1388 PF13732 Domain of unknown function (DUF4162) BF25_1388 PF00005 ABC transporter BF25_1389 PF01061 ABC-2 type transporter BF25_139 PF01336 OB-fold nucleic acid binding domain BF25_139 PF00152 tRNA synthetases class II (D, K and N) BF25_1390 PF05656 Protein of unknown function (DUF805) BF25_1394 PF00440 Bacterial regulatory proteins, tetR family BF25_1396 PF00535 Glycosyl transferase family 2 BF25_1396 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BF25_1397 PF04542 Sigma-70 region 2 BF25_1398 PF12791 Anti-sigma factor N-terminus BF25_1400 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BF25_1400 PF01522 Polysaccharide deacetylase BF25_1401 PF01022 Bacterial regulatory protein, arsR family BF25_1404 PF01638 HxlR-like helix-turn-helix BF25_1405 PF02525 Flavodoxin-like fold BF25_1407 PF00501 AMP-binding enzyme BF25_1407 PF13193 AMP-binding enzyme C-terminal domain BF25_1411 PF02567 Phenazine biosynthesis-like protein BF25_1417 PF00248 Aldo/keto reductase family BF25_1418 PF01638 HxlR-like helix-turn-helix BF25_1419 PF01638 HxlR-like helix-turn-helix BF25_1422 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF25_1422 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF25_1423 PF07702 UTRA domain BF25_1423 PF00392 Bacterial regulatory proteins, gntR family BF25_1424 PF01638 HxlR-like helix-turn-helix BF25_1425 PF03960 ArsC family BF25_143 PF01351 Ribonuclease HII BF25_143 PF11858 Domain of unknown function (DUF3378) BF25_1431 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_1432 PF03928 Haem-degrading BF25_1434 PF07690 Major Facilitator Superfamily BF25_1435 PF00248 Aldo/keto reductase family BF25_1439 PF07504 Fungalysin/Thermolysin Propeptide Motif BF25_1439 PF03413 Peptidase propeptide and YPEB domain BF25_1439 PF01447 Thermolysin metallopeptidase, catalytic domain BF25_1439 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF25_144 PF05164 Cell division protein ZapA BF25_1440 PF00106 short chain dehydrogenase BF25_1441 PF00550 Phosphopantetheine attachment site BF25_1441 PF14765 Polyketide synthase dehydratase BF25_1441 PF08659 KR domain BF25_1441 PF02801 Beta-ketoacyl synthase, C-terminal domain BF25_1441 PF00109 Beta-ketoacyl synthase, N-terminal domain BF25_1441 PF16197 Ketoacyl-synthetase C-terminal extension BF25_1441 PF08240 Alcohol dehydrogenase GroES-like domain BF25_1441 PF00107 Zinc-binding dehydrogenase BF25_1441 PF00698 Acyl transferase domain BF25_1443 PF00296 Luciferase-like monooxygenase BF25_1444 PF00107 Zinc-binding dehydrogenase BF25_1444 PF08240 Alcohol dehydrogenase GroES-like domain BF25_1445 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BF25_1445 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BF25_1446 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BF25_1446 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BF25_1447 PF02779 Transketolase, pyrimidine binding domain BF25_1447 PF02780 Transketolase, C-terminal domain BF25_1447 PF00456 Transketolase, thiamine diphosphate binding domain BF25_1448 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BF25_1448 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF25_1449 PF00923 Transaldolase/Fructose-6-phosphate aldolase BF25_145 PF02674 Colicin V production protein BF25_1450 PF02447 GntP family permease BF25_1451 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF25_1451 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF25_1452 PF10282 Lactonase, 7-bladed beta-propeller BF25_1453 PF06906 Protein of unknown function (DUF1272) BF25_1454 PF00805 Pentapeptide repeats (8 copies) BF25_1455 PF00892 EamA-like transporter family BF25_1456 PF13411 MerR HTH family regulatory protein BF25_1457 PF01595 Cyclin M transmembrane N-terminal domain BF25_1457 PF00571 CBS domain BF25_1457 PF03471 Transporter associated domain BF25_1459 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF25_146 PF14791 DNA polymerase beta thumb BF25_146 PF14716 Helix-hairpin-helix domain BF25_146 PF02811 PHP domain BF25_1463 PF07690 Major Facilitator Superfamily BF25_1465 PF08241 Methyltransferase domain BF25_1469 PF01594 AI-2E family transporter BF25_147 PF00488 MutS domain V BF25_147 PF01713 Smr domain BF25_1470 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BF25_1470 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BF25_1470 PF13288 DXP reductoisomerase C-terminal domain BF25_1471 PF00579 tRNA synthetases class I (W and Y) BF25_1473 PF00005 ABC transporter BF25_1476 PF12464 Maltose acetyltransferase BF25_1476 PF14602 Hexapeptide repeat of succinyl-transferase BF25_1477 PF07690 Major Facilitator Superfamily BF25_1478 PF00480 ROK family BF25_1479 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_1481 PF00293 NUDIX domain BF25_1481 PF13344 Haloacid dehalogenase-like hydrolase BF25_1486 PF13419 Haloacid dehalogenase-like hydrolase BF25_149 PF01479 S4 domain BF25_149 PF00849 RNA pseudouridylate synthase BF25_1491 PF00005 ABC transporter BF25_1495 PF00224 Pyruvate kinase, barrel domain BF25_1495 PF02887 Pyruvate kinase, alpha/beta domain BF25_1495 PF00391 PEP-utilising enzyme, mobile domain BF25_1497 PF00881 Nitroreductase family BF25_1498 PF01638 HxlR-like helix-turn-helix BF25_15 PF11009 Protein of unknown function (DUF2847) BF25_150 PF05525 Branched-chain amino acid transport protein BF25_1501 PF03129 Anticodon binding domain BF25_1501 PF13393 Histidyl-tRNA synthetase BF25_1502 PF04073 Aminoacyl-tRNA editing domain BF25_1503 PF02660 Glycerol-3-phosphate acyltransferase BF25_1504 PF01381 Helix-turn-helix BF25_1507 PF04231 Endonuclease I BF25_1508 PF03606 C4-dicarboxylate anaerobic carrier BF25_1509 PF03737 Aldolase/RraA BF25_151 PF05031 Iron Transport-associated domain BF25_1512 PF02361 Cobalt transport protein BF25_1513 PF00005 ABC transporter BF25_1515 PF14256 YwiC-like protein BF25_1519 PF02525 Flavodoxin-like fold BF25_1521 PF02667 Short chain fatty acid transporter BF25_1522 PF17440 Thiol-activated cytolysin beta sandwich domain BF25_1522 PF01289 Thiol-activated cytolysin BF25_1523 PF00440 Bacterial regulatory proteins, tetR family BF25_1524 PF00893 Small Multidrug Resistance protein BF25_1525 PF17314 Family of unknown function (DUF5360) BF25_1527 PF13396 Phospholipase_D-nuclease N-terminal BF25_1528 PF13732 Domain of unknown function (DUF4162) BF25_1528 PF00005 ABC transporter BF25_1529 PF12679 ABC-2 family transporter protein BF25_153 PF05031 Iron Transport-associated domain BF25_1532 PF07690 Major Facilitator Superfamily BF25_1533 PF01047 MarR family BF25_1534 PF12697 Alpha/beta hydrolase family BF25_1535 PF07690 Major Facilitator Superfamily BF25_1536 PF14044 NETI protein BF25_154 PF01497 Periplasmic binding protein BF25_1543 PF00395 S-layer homology domain BF25_1545 PF01804 Penicillin amidase BF25_1546 PF12833 Helix-turn-helix domain BF25_1546 PF01497 Periplasmic binding protein BF25_1547 PF07883 Cupin domain BF25_155 PF01032 FecCD transport family BF25_1550 PF04542 Sigma-70 region 2 BF25_1550 PF08281 Sigma-70, region 4 BF25_1553 PF00266 Aminotransferase class-V BF25_1554 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF25_1554 PF01842 ACT domain BF25_1554 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF25_1557 PF13520 Amino acid permease BF25_1558 PF01037 Lrp/AsnC ligand binding domain BF25_1559 PF00857 Isochorismatase family BF25_156 PF00005 ABC transporter BF25_1560 PF02769 AIR synthase related protein, C-terminal domain BF25_1560 PF00586 AIR synthase related protein, N-terminal domain BF25_1561 PF07503 HypF finger BF25_1561 PF01300 Telomere recombination BF25_1561 PF00708 Acylphosphatase BF25_1561 PF17788 HypF Kae1-like domain BF25_1562 PF00202 Aminotransferase class-III BF25_1563 PF03315 Serine dehydratase beta chain BF25_1563 PF01842 ACT domain BF25_1564 PF03313 Serine dehydratase alpha chain BF25_1566 PF01022 Bacterial regulatory protein, arsR family BF25_1568 PF16859 Tetracyclin repressor-like, C-terminal domain BF25_1568 PF00440 Bacterial regulatory proteins, tetR family BF25_1569 PF07690 Major Facilitator Superfamily BF25_157 PF04203 Sortase domain BF25_1570 PF02661 Fic/DOC family BF25_1571 PF01609 Transposase DDE domain BF25_1572 PF18496 Collagenase G catalytic helper subdomain BF25_1572 PF01752 Collagenase BF25_1572 PF08453 Peptidase family M9 N-terminal BF25_1573 PF01554 MatE BF25_1577 PF02743 Cache domain BF25_1577 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF25_1577 PF00672 HAMP domain BF25_158 PF03992 Antibiotic biosynthesis monooxygenase BF25_1580 PF11798 IMS family HHH motif BF25_1580 PF11799 impB/mucB/samB family C-terminal domain BF25_1580 PF00817 impB/mucB/samB family BF25_1584 PF18801 response regulator aspartate phosphatase H, N terminal BF25_1585 PF00356 Bacterial regulatory proteins, lacI family BF25_1586 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BF25_1587 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BF25_1588 PF05116 Sucrose-6F-phosphate phosphohydrolase BF25_1589 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF25_1589 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF25_1590 PF07690 Major Facilitator Superfamily BF25_1594 PF17676 LD-carboxypeptidase C-terminal domain BF25_1594 PF02016 LD-carboxypeptidase N-terminal domain BF25_1596 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF25_1596 PF03466 LysR substrate binding domain BF25_1597 PF02754 Cysteine-rich domain BF25_1598 PF13183 4Fe-4S dicluster domain BF25_1598 PF02589 LUD domain BF25_1598 PF11870 Domain of unknown function (DUF3390) BF25_1599 PF02589 LUD domain BF25_16 PF07537 CamS sex pheromone cAM373 precursor BF25_160 PF17785 PUA-like domain BF25_160 PF10672 S-adenosylmethionine-dependent methyltransferase BF25_1600 PF07690 Major Facilitator Superfamily BF25_1601 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF25_1601 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF25_1602 PF04299 Putative FMN-binding domain BF25_1603 PF00583 Acetyltransferase (GNAT) family BF25_1604 PF01047 MarR family BF25_1606 PF00072 Response regulator receiver domain BF25_1606 PF00486 Transcriptional regulatory protein, C terminal BF25_1607 PF00672 HAMP domain BF25_1607 PF00512 His Kinase A (phospho-acceptor) domain BF25_1607 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_161 PF09962 Uncharacterized conserved protein (DUF2196) BF25_1610 PF02687 FtsX-like permease family BF25_1611 PF00005 ABC transporter BF25_1614 PF04072 Leucine carboxyl methyltransferase BF25_1615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF25_1615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF25_1617 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BF25_1618 PF00753 Metallo-beta-lactamase superfamily BF25_1621 PF01381 Helix-turn-helix BF25_1623 PF00144 Beta-lactamase BF25_1627 PF00291 Pyridoxal-phosphate dependent enzyme BF25_163 PF00072 Response regulator receiver domain BF25_163 PF00486 Transcriptional regulatory protein, C terminal BF25_1632 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_1632 PF00672 HAMP domain BF25_1632 PF00512 His Kinase A (phospho-acceptor) domain BF25_1633 PF00072 Response regulator receiver domain BF25_1633 PF00486 Transcriptional regulatory protein, C terminal BF25_1638 PF07690 Major Facilitator Superfamily BF25_1639 PF00667 FAD binding domain BF25_1639 PF00067 Cytochrome P450 BF25_1639 PF00175 Oxidoreductase NAD-binding domain BF25_1639 PF00258 Flavodoxin BF25_164 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_164 PF00512 His Kinase A (phospho-acceptor) domain BF25_1640 PF12802 MarR family BF25_1643 PF00144 Beta-lactamase BF25_1648 PF01609 Transposase DDE domain BF25_165 PF00005 ABC transporter BF25_1650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_1653 PF01037 Lrp/AsnC ligand binding domain BF25_1656 PF00012 Hsp70 protein BF25_1660 PF01022 Bacterial regulatory protein, arsR family BF25_1661 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_1662 PF01758 Sodium Bile acid symporter family BF25_1663 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF25_1668 PF00005 ABC transporter BF25_1669 PF00950 ABC 3 transport family BF25_1670 PF01297 Zinc-uptake complex component A periplasmic BF25_1671 PF00561 alpha/beta hydrolase fold BF25_1672 PF01040 UbiA prenyltransferase family BF25_1674 PF10057 Uncharacterized conserved protein (DUF2294) BF25_1675 PF00361 Proton-conducting membrane transporter BF25_1675 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BF25_1676 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BF25_1678 PF00875 DNA photolyase BF25_1678 PF03441 FAD binding domain of DNA photolyase BF25_1679 PF03073 TspO/MBR family BF25_1682 PF11181 Heat induced stress protein YflT BF25_1685 PF01544 CorA-like Mg2+ transporter protein BF25_1686 PF01544 CorA-like Mg2+ transporter protein BF25_1687 PF01047 MarR family BF25_1688 PF03466 LysR substrate binding domain BF25_1688 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF25_1690 PF01979 Amidohydrolase family BF25_1693 PF00857 Isochorismatase family BF25_1694 PF00561 alpha/beta hydrolase fold BF25_1695 PF06628 Catalase-related immune-responsive BF25_1695 PF00199 Catalase BF25_1696 PF02872 5'-nucleotidase, C-terminal domain BF25_1696 PF00149 Calcineurin-like phosphoesterase BF25_1696 PF17936 Bacterial Ig domain BF25_17 PF00356 Bacterial regulatory proteins, lacI family BF25_1705 PF04960 Glutaminase BF25_1708 PF08664 YcbB domain BF25_1708 PF00072 Response regulator receiver domain BF25_1709 PF03323 Bacillus/Clostridium GerA spore germination protein BF25_171 PF05163 DinB family BF25_1712 PF05504 Spore germination B3/ GerAC like, C-terminal BF25_1713 PF05504 Spore germination B3/ GerAC like, C-terminal BF25_1716 PF03949 Malic enzyme, NAD binding domain BF25_1716 PF00390 Malic enzyme, N-terminal domain BF25_1717 PF13564 DoxX-like family BF25_1718 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF25_1718 PF03807 NADP oxidoreductase coenzyme F420-dependent BF25_1719 PF05525 Branched-chain amino acid transport protein BF25_172 PF01032 FecCD transport family BF25_1720 PF13520 Amino acid permease BF25_1721 PF01541 GIY-YIG catalytic domain BF25_1721 PF12826 Helix-hairpin-helix motif BF25_1721 PF02151 UvrB/uvrC motif BF25_1721 PF08459 UvrC Helix-hairpin-helix N-terminal BF25_1723 PF01381 Helix-turn-helix BF25_1724 PF17763 Glutaminase/Asparaginase C-terminal domain BF25_1724 PF00710 Asparaginase, N-terminal BF25_1725 PF10415 Fumarase C C-terminus BF25_1725 PF00206 Lyase BF25_1728 PF08240 Alcohol dehydrogenase GroES-like domain BF25_1728 PF13823 Alcohol dehydrogenase GroES-associated BF25_1728 PF00107 Zinc-binding dehydrogenase BF25_1729 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF25_173 PF01497 Periplasmic binding protein BF25_1730 PF11553 Protein of unknown function (DUF3231) BF25_1731 PF10710 Protein of unknown function (DUF2512) BF25_1732 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF25_1734 PF00324 Amino acid permease BF25_1735 PF00324 Amino acid permease BF25_1736 PF01810 LysE type translocator BF25_1737 PF08892 YqcI/YcgG family BF25_1739 PF07875 Coat F domain BF25_1742 PF00753 Metallo-beta-lactamase superfamily BF25_1743 PF00391 PEP-utilising enzyme, mobile domain BF25_1743 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BF25_1744 PF00440 Bacterial regulatory proteins, tetR family BF25_1746 PF02915 Rubrerythrin BF25_175 PF13193 AMP-binding enzyme C-terminal domain BF25_175 PF00501 AMP-binding enzyme BF25_1753 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF25_1753 PF02770 Acyl-CoA dehydrogenase, middle domain BF25_1753 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BF25_1756 PF07454 Stage II sporulation protein P (SpoIIP) BF25_1757 PF03932 CutC family BF25_1758 PF10502 Signal peptidase, peptidase S26 BF25_1759 PF01614 Bacterial transcriptional regulator BF25_1759 PF09339 IclR helix-turn-helix domain BF25_176 PF00440 Bacterial regulatory proteins, tetR family BF25_176 PF08359 YsiA-like protein, C-terminal region BF25_1760 PF02682 Carboxyltransferase domain, subdomain C and D BF25_1761 PF02626 Carboxyltransferase domain, subdomain A and B BF25_1762 PF03746 LamB/YcsF family BF25_1767 PF01470 Pyroglutamyl peptidase BF25_1768 PF02146 Sir2 family BF25_177 PF00378 Enoyl-CoA hydratase/isomerase BF25_1771 PF10502 Signal peptidase, peptidase S26 BF25_1773 PF00293 NUDIX domain BF25_1777 PF10898 Protein of unknown function (DUF2716) BF25_1778 PF08713 DNA alkylation repair enzyme BF25_178 PF01012 Electron transfer flavoprotein domain BF25_1780 PF00324 Amino acid permease BF25_1781 PF13302 Acetyltransferase (GNAT) domain BF25_1782 PF01925 Sulfite exporter TauE/SafE BF25_1788 PF00561 alpha/beta hydrolase fold BF25_1789 PF00486 Transcriptional regulatory protein, C terminal BF25_1789 PF00072 Response regulator receiver domain BF25_179 PF01012 Electron transfer flavoprotein domain BF25_179 PF00766 Electron transfer flavoprotein FAD-binding domain BF25_1790 PF00672 HAMP domain BF25_1790 PF00512 His Kinase A (phospho-acceptor) domain BF25_1792 PF13031 Protein of unknown function (DUF3892) BF25_1793 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BF25_1794 PF00392 Bacterial regulatory proteins, gntR family BF25_1794 PF00155 Aminotransferase class I and II BF25_1795 PF00892 EamA-like transporter family BF25_1798 PF00583 Acetyltransferase (GNAT) family BF25_1799 PF12833 Helix-turn-helix domain BF25_180 PF00085 Thioredoxin BF25_1804 PF00005 ABC transporter BF25_1804 PF02687 FtsX-like permease family BF25_1804 PF12704 MacB-like periplasmic core domain BF25_1806 PF00392 Bacterial regulatory proteins, gntR family BF25_1807 PF00005 ABC transporter BF25_181 PF01541 GIY-YIG catalytic domain BF25_181 PF08459 UvrC Helix-hairpin-helix N-terminal BF25_181 PF02151 UvrB/uvrC motif BF25_1810 PF00293 NUDIX domain BF25_1812 PF03764 Elongation factor G, domain IV BF25_1812 PF00009 Elongation factor Tu GTP binding domain BF25_1812 PF14492 Elongation Factor G, domain II BF25_1812 PF00679 Elongation factor G C-terminus BF25_1813 PF01047 MarR family BF25_1814 PF00881 Nitroreductase family BF25_1816 PF07726 ATPase family associated with various cellular activities (AAA) BF25_1816 PF17863 AAA lid domain BF25_182 PF10702 Protein of unknown function (DUF2507) BF25_1821 PF00144 Beta-lactamase BF25_1822 PF13382 Adenine deaminase C-terminal domain BF25_1822 PF01979 Amidohydrolase family BF25_1824 PF00199 Catalase BF25_1824 PF06628 Catalase-related immune-responsive BF25_1825 PF00202 Aminotransferase class-III BF25_1827 PF00535 Glycosyl transferase family 2 BF25_1829 PF00535 Glycosyl transferase family 2 BF25_183 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BF25_1832 PF00535 Glycosyl transferase family 2 BF25_1834 PF07690 Major Facilitator Superfamily BF25_1837 PF17863 AAA lid domain BF25_1837 PF07726 ATPase family associated with various cellular activities (AAA) BF25_184 PF00890 FAD binding domain BF25_184 PF02910 Fumarate reductase flavoprotein C-term BF25_1841 PF12681 Glyoxalase-like domain BF25_1842 PF13302 Acetyltransferase (GNAT) domain BF25_1844 PF04397 LytTr DNA-binding domain BF25_1844 PF00072 Response regulator receiver domain BF25_1846 PF10086 YhfC intramembrane metalloprotease BF25_1849 PF13443 Cro/C1-type HTH DNA-binding domain BF25_185 PF13085 2Fe-2S iron-sulfur cluster binding domain BF25_185 PF13183 4Fe-4S dicluster domain BF25_1850 PF11188 Protein of unknown function (DUF2975) BF25_1851 PF00245 Alkaline phosphatase BF25_1852 PF00487 Fatty acid desaturase BF25_1853 PF01139 tRNA-splicing ligase RtcB BF25_1854 PF00324 Amino acid permease BF25_1855 PF09339 IclR helix-turn-helix domain BF25_1855 PF01614 Bacterial transcriptional regulator BF25_1856 PF01546 Peptidase family M20/M25/M40 BF25_1857 PF03807 NADP oxidoreductase coenzyme F420-dependent BF25_1857 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF25_1858 PF00696 Amino acid kinase family BF25_1858 PF01472 PUA domain BF25_1859 PF00171 Aldehyde dehydrogenase family BF25_186 PF03061 Thioesterase superfamily BF25_1860 PF07662 Na+ dependent nucleoside transporter C-terminus BF25_1860 PF01773 Na+ dependent nucleoside transporter N-terminus BF25_1864 PF03992 Antibiotic biosynthesis monooxygenase BF25_1869 PF01791 DeoC/LacD family aldolase BF25_187 PF02557 D-alanyl-D-alanine carboxypeptidase BF25_1871 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF25_1871 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF25_1872 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF25_1872 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF25_1873 PF04198 Putative sugar-binding domain BF25_1873 PF00325 Bacterial regulatory proteins, crp family BF25_1874 PF00005 ABC transporter BF25_1875 PF02653 Branched-chain amino acid transport system / permease component BF25_1876 PF02653 Branched-chain amino acid transport system / permease component BF25_1877 PF13407 Periplasmic binding protein domain BF25_1878 PF06039 Malate:quinone oxidoreductase (Mqo) BF25_188 PF01618 MotA/TolQ/ExbB proton channel family BF25_1883 PF04542 Sigma-70 region 2 BF25_1883 PF08281 Sigma-70, region 4 BF25_1885 PF06725 3D domain BF25_1885 PF01476 LysM domain BF25_1888 PF01636 Phosphotransferase enzyme family BF25_189 PF00691 OmpA family BF25_189 PF13677 Membrane MotB of proton-channel complex MotA/MotB BF25_1893 PF00793 DAHP synthetase I family BF25_1893 PF01817 Chorismate mutase type II BF25_1894 PF01264 Chorismate synthase BF25_1895 PF00155 Aminotransferase class I and II BF25_1896 PF02153 Prephenate dehydrogenase BF25_1896 PF01842 ACT domain BF25_1897 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF25_1899 PF00440 Bacterial regulatory proteins, tetR family BF25_1899 PF16295 Tetracyclin repressor-like, C-terminal domain BF25_190 PF13677 Membrane MotB of proton-channel complex MotA/MotB BF25_190 PF00691 OmpA family BF25_1900 PF03176 MMPL family BF25_1901 PF03176 MMPL family BF25_1903 PF00005 ABC transporter BF25_1903 PF12848 ABC transporter BF25_1904 PF00884 Sulfatase BF25_1905 PF03741 Integral membrane protein TerC family BF25_1907 PF01522 Polysaccharide deacetylase BF25_1909 PF08713 DNA alkylation repair enzyme BF25_191 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BF25_1913 PF12867 DinB superfamily BF25_1914 PF13536 Putative multidrug resistance efflux transporter BF25_1919 PF02522 Aminoglycoside 3-N-acetyltransferase BF25_192 PF00005 ABC transporter BF25_192 PF13732 Domain of unknown function (DUF4162) BF25_1927 PF00005 ABC transporter BF25_1928 PF09084 NMT1/THI5 like BF25_1929 PF00528 Binding-protein-dependent transport system inner membrane component BF25_1930 PF00296 Luciferase-like monooxygenase BF25_1932 PF01594 AI-2E family transporter BF25_194 PF02082 Transcriptional regulator BF25_1941 PF00005 ABC transporter BF25_1946 PF03630 Fumble BF25_1947 PF07977 FabA-like domain BF25_1948 PF00155 Aminotransferase class I and II BF25_195 PF00230 Major intrinsic protein BF25_1954 PF08241 Methyltransferase domain BF25_1956 PF01156 Inosine-uridine preferring nucleoside hydrolase BF25_1957 PF04226 Transglycosylase associated protein BF25_196 PF13536 Putative multidrug resistance efflux transporter BF25_1961 PF07690 Major Facilitator Superfamily BF25_1962 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_1962 PF12793 Sugar transport-related sRNA regulator N-term BF25_1963 PF13171 Protein of unknown function (DUF4004) BF25_1964 PF04519 Polymer-forming cytoskeletal BF25_1966 PF07690 Major Facilitator Superfamily BF25_197 PF07883 Cupin domain BF25_197 PF01381 Helix-turn-helix BF25_1970 PF02645 Uncharacterised protein, DegV family COG1307 BF25_1973 PF08439 Oligopeptidase F BF25_1973 PF01432 Peptidase family M3 BF25_1974 PF03808 Glycosyl transferase WecB/TagA/CpsF family BF25_1976 PF01048 Phosphorylase superfamily BF25_198 PF04024 PspC domain BF25_1980 PF00486 Transcriptional regulatory protein, C terminal BF25_1980 PF00072 Response regulator receiver domain BF25_1981 PF00512 His Kinase A (phospho-acceptor) domain BF25_1981 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_1981 PF00989 PAS fold BF25_1981 PF16736 Single Cache-like BF25_1982 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BF25_1982 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BF25_1987 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF25_1990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF25_1990 PF13378 Enolase C-terminal domain-like BF25_1991 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BF25_1991 PF00877 NlpC/P60 family BF25_1992 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_1993 PF00958 GMP synthase C terminal domain BF25_1993 PF13673 Acetyltransferase (GNAT) domain BF25_1993 PF13302 Acetyltransferase (GNAT) domain BF25_1993 PF03352 Methyladenine glycosylase BF25_1993 PF00117 Glutamine amidotransferase class-I BF25_1994 PF04914 DltD protein BF25_1997 PF09335 SNARE associated Golgi protein BF25_1998 PF08876 Domain of unknown function (DUF1836) BF25_2 PF00085 Thioredoxin BF25_2001 PF04324 BFD-like [2Fe-2S] binding domain BF25_2001 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_2003 PF02954 Bacterial regulatory protein, Fis family BF25_2003 PF13188 PAS domain BF25_2003 PF00158 Sigma-54 interaction domain BF25_2004 PF01266 FAD dependent oxidoreductase BF25_2005 PF05544 Proline racemase BF25_2006 PF05544 Proline racemase BF25_2007 PF00701 Dihydrodipicolinate synthetase family BF25_2008 PF00171 Aldehyde dehydrogenase family BF25_2009 PF01235 Sodium:alanine symporter family BF25_201 PF04397 LytTr DNA-binding domain BF25_201 PF00072 Response regulator receiver domain BF25_2010 PF02627 Carboxymuconolactone decarboxylase family BF25_2012 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BF25_2012 PF18416 N-acetylglucosamine binding protein domain 2 BF25_2013 PF02833 DHHA2 domain BF25_2013 PF01368 DHH family BF25_202 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_202 PF06580 Histidine kinase BF25_202 PF07694 5TMR of 5TMR-LYT BF25_2020 PF16124 RecQ zinc-binding BF25_2020 PF00271 Helicase conserved C-terminal domain BF25_2020 PF00270 DEAD/DEAH box helicase BF25_2020 PF00570 HRDC domain BF25_2020 PF09382 RQC domain BF25_2021 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BF25_2024 PF13538 UvrD-like helicase C-terminal domain BF25_203 PF00005 ABC transporter BF25_203 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF25_2035 PF13567 Domain of unknown function (DUF4131) BF25_2035 PF03772 Competence protein BF25_2035 PF00753 Metallo-beta-lactamase superfamily BF25_204 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF25_204 PF00005 ABC transporter BF25_2040 PF10990 Protein of unknown function (DUF2809) BF25_2044 PF18416 N-acetylglucosamine binding protein domain 2 BF25_2044 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BF25_2045 PF13673 Acetyltransferase (GNAT) domain BF25_2046 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BF25_2049 PF00574 Clp protease BF25_205 PF00528 Binding-protein-dependent transport system inner membrane component BF25_2050 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BF25_2051 PF00005 ABC transporter BF25_2051 PF00571 CBS domain BF25_2052 PF00528 Binding-protein-dependent transport system inner membrane component BF25_2058 PF04229 GrpB protein BF25_2058 PF13673 Acetyltransferase (GNAT) domain BF25_2059 PF00106 short chain dehydrogenase BF25_2061 PF00676 Dehydrogenase E1 component BF25_2062 PF02779 Transketolase, pyrimidine binding domain BF25_2062 PF02780 Transketolase, C-terminal domain BF25_2063 PF00364 Biotin-requiring enzyme BF25_2063 PF02817 e3 binding domain BF25_2063 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF25_2064 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_2064 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF25_2068 PF02082 Transcriptional regulator BF25_2069 PF00403 Heavy-metal-associated domain BF25_2069 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_2069 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF25_207 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_2072 PF08220 DeoR-like helix-turn-helix domain BF25_2072 PF00455 DeoR C terminal sensor domain BF25_2073 PF13302 Acetyltransferase (GNAT) domain BF25_2076 PF01590 GAF domain BF25_2076 PF02954 Bacterial regulatory protein, Fis family BF25_2076 PF00158 Sigma-54 interaction domain BF25_208 PF07969 Amidohydrolase family BF25_2081 PF13344 Haloacid dehalogenase-like hydrolase BF25_2081 PF00293 NUDIX domain BF25_2082 PF00440 Bacterial regulatory proteins, tetR family BF25_2082 PF08359 YsiA-like protein, C-terminal region BF25_2083 PF00266 Aminotransferase class-V BF25_2084 PF04199 Putative cyclase BF25_2085 PF03301 Tryptophan 2,3-dioxygenase BF25_2088 PF07486 Cell Wall Hydrolase BF25_2088 PF01471 Putative peptidoglycan binding domain BF25_2089 PF03413 Peptidase propeptide and YPEB domain BF25_2089 PF14620 YpeB sporulation BF25_209 PF07969 Amidohydrolase family BF25_2090 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BF25_2093 PF06081 Aromatic acid exporter family member 1 BF25_2098 PF00561 alpha/beta hydrolase fold BF25_2099 PF00392 Bacterial regulatory proteins, gntR family BF25_2099 PF00155 Aminotransferase class I and II BF25_2100 PF00892 EamA-like transporter family BF25_2101 PF08299 Bacterial dnaA protein helix-turn-helix BF25_2101 PF11638 DnaA N-terminal domain BF25_2101 PF00308 Bacterial dnaA protein BF25_2102 PF00344 SecY translocase BF25_2106 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF25_2106 PF01447 Thermolysin metallopeptidase, catalytic domain BF25_2106 PF07504 Fungalysin/Thermolysin Propeptide Motif BF25_2106 PF03413 Peptidase propeptide and YPEB domain BF25_2107 PF00128 Alpha amylase, catalytic domain BF25_2107 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF25_2107 PF03714 Bacterial pullanase-associated domain BF25_211 PF00860 Permease family BF25_2111 PF00282 Pyridoxal-dependent decarboxylase conserved domain BF25_2113 PF07859 alpha/beta hydrolase fold BF25_2116 PF13419 Haloacid dehalogenase-like hydrolase BF25_212 PF00196 Bacterial regulatory proteins, luxR family BF25_2121 PF01266 FAD dependent oxidoreductase BF25_2129 PF01541 GIY-YIG catalytic domain BF25_2131 PF02673 Bacitracin resistance protein BacA BF25_2132 PF02673 Bacitracin resistance protein BacA BF25_2135 PF12867 DinB superfamily BF25_2137 PF08000 Bacterial PH domain BF25_2138 PF01734 Patatin-like phospholipase BF25_2144 PF09234 Domain of unknown function (DUF1963) BF25_2148 PF12706 Beta-lactamase superfamily domain BF25_215 PF00440 Bacterial regulatory proteins, tetR family BF25_2151 PF00293 NUDIX domain BF25_2152 PF00712 DNA polymerase III beta subunit, N-terminal domain BF25_2152 PF02767 DNA polymerase III beta subunit, central domain BF25_2152 PF02768 DNA polymerase III beta subunit, C-terminal domain BF25_2153 PF09297 NADH pyrophosphatase zinc ribbon domain BF25_2153 PF00293 NUDIX domain BF25_2155 PF07690 Major Facilitator Superfamily BF25_2159 PF00293 NUDIX domain BF25_2161 PF01270 Glycosyl hydrolases family 8 BF25_2162 PF00892 EamA-like transporter family BF25_2163 PF00155 Aminotransferase class I and II BF25_2163 PF00392 Bacterial regulatory proteins, gntR family BF25_2164 PF00155 Aminotransferase class I and II BF25_2164 PF00392 Bacterial regulatory proteins, gntR family BF25_2167 PF03009 Glycerophosphoryl diester phosphodiesterase family BF25_217 PF07690 Major Facilitator Superfamily BF25_2171 PF07690 Major Facilitator Superfamily BF25_2173 PF00144 Beta-lactamase BF25_2176 PF01965 DJ-1/PfpI family BF25_218 PF01177 Asp/Glu/Hydantoin racemase BF25_2182 PF00144 Beta-lactamase BF25_2182 PF11954 Domain of unknown function (DUF3471) BF25_2185 PF08240 Alcohol dehydrogenase GroES-like domain BF25_2185 PF00107 Zinc-binding dehydrogenase BF25_2188 PF00512 His Kinase A (phospho-acceptor) domain BF25_2188 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_219 PF10646 Sporulation and spore germination BF25_2191 PF00005 ABC transporter BF25_2191 PF12558 ATP-binding cassette cobalt transporter BF25_2192 PF07155 ECF-type riboflavin transporter, S component BF25_2193 PF01177 Asp/Glu/Hydantoin racemase BF25_2194 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BF25_2196 PF13426 PAS domain BF25_2196 PF00512 His Kinase A (phospho-acceptor) domain BF25_2196 PF13188 PAS domain BF25_2196 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_2196 PF00989 PAS fold BF25_22 PF01741 Large-conductance mechanosensitive channel, MscL BF25_220 PF01138 3' exoribonuclease family, domain 1 BF25_220 PF03725 3' exoribonuclease family, domain 2 BF25_2200 PF00067 Cytochrome P450 BF25_2202 PF07561 Domain of Unknown Function (DUF1540) BF25_2203 PF00132 Bacterial transferase hexapeptide (six repeats) BF25_2205 PF00067 Cytochrome P450 BF25_221 PF01725 Ham1 family BF25_222 PF12850 Calcineurin-like phosphoesterase superfamily domain BF25_2221 PF03070 TENA/THI-4/PQQC family BF25_2222 PF01820 D-ala D-ala ligase N-terminus BF25_2222 PF07478 D-ala D-ala ligase C-terminus BF25_2223 PF00155 Aminotransferase class I and II BF25_2223 PF00392 Bacterial regulatory proteins, gntR family BF25_2224 PF01842 ACT domain BF25_2224 PF00742 Homoserine dehydrogenase BF25_2224 PF03447 Homoserine dehydrogenase, NAD binding domain BF25_2228 PF02687 FtsX-like permease family BF25_2229 PF02687 FtsX-like permease family BF25_2230 PF00005 ABC transporter BF25_2236 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_2238 PF00072 Response regulator receiver domain BF25_2238 PF00486 Transcriptional regulatory protein, C terminal BF25_2240 PF07486 Cell Wall Hydrolase BF25_2243 PF08245 Mur ligase middle domain BF25_2243 PF02875 Mur ligase family, glutamate ligase domain BF25_2243 PF01225 Mur ligase family, catalytic domain BF25_2244 PF01225 Mur ligase family, catalytic domain BF25_2244 PF02875 Mur ligase family, glutamate ligase domain BF25_2244 PF08245 Mur ligase middle domain BF25_2247 PF00107 Zinc-binding dehydrogenase BF25_2247 PF08240 Alcohol dehydrogenase GroES-like domain BF25_2249 PF00392 Bacterial regulatory proteins, gntR family BF25_2249 PF00155 Aminotransferase class I and II BF25_2252 PF12833 Helix-turn-helix domain BF25_2253 PF01636 Phosphotransferase enzyme family BF25_2257 PF07690 Major Facilitator Superfamily BF25_2258 PF00376 MerR family regulatory protein BF25_2258 PF09278 MerR, DNA binding BF25_2259 PF00144 Beta-lactamase BF25_226 PF11724 YvbH-like oligomerisation region BF25_226 PF08000 Bacterial PH domain BF25_2262 PF17755 UvrA DNA-binding domain BF25_2262 PF17760 UvrA interaction domain BF25_2262 PF17755 UvrA DNA-binding domain BF25_2262 PF17760 UvrA interaction domain BF25_2266 PF03413 Peptidase propeptide and YPEB domain BF25_2266 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF25_2266 PF07504 Fungalysin/Thermolysin Propeptide Motif BF25_2266 PF01447 Thermolysin metallopeptidase, catalytic domain BF25_2267 PF07504 Fungalysin/Thermolysin Propeptide Motif BF25_2267 PF03413 Peptidase propeptide and YPEB domain BF25_2267 PF01447 Thermolysin metallopeptidase, catalytic domain BF25_2267 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF25_2271 PF01048 Phosphorylase superfamily BF25_2272 PF13021 Domain of unknown function (DUF3885) BF25_2273 PF01966 HD domain BF25_2274 PF00072 Response regulator receiver domain BF25_2274 PF00486 Transcriptional regulatory protein, C terminal BF25_2275 PF00512 His Kinase A (phospho-acceptor) domain BF25_2275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_2276 PF07943 Penicillin-binding protein 5, C-terminal domain BF25_2276 PF00768 D-alanyl-D-alanine carboxypeptidase BF25_2277 PF05163 DinB family BF25_2279 PF00485 Phosphoribulokinase / Uridine kinase family BF25_2280 PF00583 Acetyltransferase (GNAT) family BF25_2282 PF00501 AMP-binding enzyme BF25_2282 PF16177 Acetyl-coenzyme A synthetase N-terminus BF25_2282 PF13193 AMP-binding enzyme C-terminal domain BF25_2283 PF01039 Carboxyl transferase domain BF25_2284 PF00378 Enoyl-CoA hydratase/isomerase BF25_2285 PF00682 HMGL-like BF25_2286 PF00364 Biotin-requiring enzyme BF25_2287 PF02785 Biotin carboxylase C-terminal domain BF25_2287 PF00289 Biotin carboxylase, N-terminal domain BF25_2287 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF25_2288 PF02770 Acyl-CoA dehydrogenase, middle domain BF25_2288 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF25_2288 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF25_2291 PF00440 Bacterial regulatory proteins, tetR family BF25_2291 PF08359 YsiA-like protein, C-terminal region BF25_2293 PF00005 ABC transporter BF25_2296 PF00581 Rhodanese-like domain BF25_2297 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_2299 PF13302 Acetyltransferase (GNAT) domain BF25_23 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF25_230 PF05697 Bacterial trigger factor protein (TF) BF25_230 PF05698 Bacterial trigger factor protein (TF) C-terminus BF25_230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BF25_2300 PF00990 Diguanylate cyclase, GGDEF domain BF25_2300 PF03707 Bacterial signalling protein N terminal repeat BF25_2300 PF00563 EAL domain BF25_2303 PF00440 Bacterial regulatory proteins, tetR family BF25_2306 PF00395 S-layer homology domain BF25_2306 PF01520 N-acetylmuramoyl-L-alanine amidase BF25_2308 PF02557 D-alanyl-D-alanine carboxypeptidase BF25_231 PF07724 AAA domain (Cdc48 subfamily) BF25_231 PF06689 ClpX C4-type zinc finger BF25_231 PF10431 C-terminal, D2-small domain, of ClpB protein BF25_2311 PF01381 Helix-turn-helix BF25_2312 PF18801 response regulator aspartate phosphatase H, N terminal BF25_2314 PF02872 5'-nucleotidase, C-terminal domain BF25_2314 PF00149 Calcineurin-like phosphoesterase BF25_2315 PF02872 5'-nucleotidase, C-terminal domain BF25_2315 PF00149 Calcineurin-like phosphoesterase BF25_2319 PF04962 KduI/IolB family BF25_232 PF00004 ATPase family associated with various cellular activities (AAA) BF25_232 PF05362 Lon protease (S16) C-terminal proteolytic domain BF25_2320 PF01116 Fructose-bisphosphate aldolase class-II BF25_2321 PF01261 Xylose isomerase-like TIM barrel BF25_2322 PF01261 Xylose isomerase-like TIM barrel BF25_2323 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF25_2323 PF00205 Thiamine pyrophosphate enzyme, central domain BF25_2323 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF25_2324 PF00171 Aldehyde dehydrogenase family BF25_2325 PF00294 pfkB family carbohydrate kinase BF25_2326 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF25_2326 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF25_2327 PF07690 Major Facilitator Superfamily BF25_2328 PF00356 Bacterial regulatory proteins, lacI family BF25_2329 PF01569 PAP2 superfamily BF25_233 PF02190 ATP-dependent protease La (LON) substrate-binding domain BF25_233 PF00004 ATPase family associated with various cellular activities (AAA) BF25_233 PF05362 Lon protease (S16) C-terminal proteolytic domain BF25_2333 PF03717 Penicillin-binding Protein dimerisation domain BF25_2333 PF00905 Penicillin binding protein transpeptidase domain BF25_2335 PF04542 Sigma-70 region 2 BF25_2335 PF08281 Sigma-70, region 4 BF25_2339 PF01546 Peptidase family M20/M25/M40 BF25_2339 PF07687 Peptidase dimerisation domain BF25_234 PF01926 50S ribosome-binding GTPase BF25_2345 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BF25_2346 PF00300 Histidine phosphatase superfamily (branch 1) BF25_2347 PF12802 MarR family BF25_2348 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF25_2348 PF00205 Thiamine pyrophosphate enzyme, central domain BF25_2348 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF25_2349 PF08241 Methyltransferase domain BF25_235 PF02566 OsmC-like protein BF25_2351 PF03848 Tellurite resistance protein TehB BF25_2351 PF09313 Domain of unknown function (DUF1971) BF25_2352 PF12704 MacB-like periplasmic core domain BF25_2352 PF00005 ABC transporter BF25_2352 PF02687 FtsX-like permease family BF25_2355 PF17932 Tetracyclin repressor-like, C-terminal domain BF25_2355 PF00440 Bacterial regulatory proteins, tetR family BF25_2357 PF00270 DEAD/DEAH box helicase BF25_2357 PF00271 Helicase conserved C-terminal domain BF25_236 PF01047 MarR family BF25_2360 PF00753 Metallo-beta-lactamase superfamily BF25_2360 PF16123 Hydroxyacylglutathione hydrolase C-terminus BF25_2362 PF00291 Pyridoxal-phosphate dependent enzyme BF25_2363 PF00266 Aminotransferase class-V BF25_2364 PF02660 Glycerol-3-phosphate acyltransferase BF25_2365 PF01869 BadF/BadG/BcrA/BcrD ATPase family BF25_2366 PF03702 Anhydro-N-acetylmuramic acid kinase BF25_2368 PF02378 Phosphotransferase system, EIIC BF25_237 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BF25_237 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BF25_237 PF01488 Shikimate / quinate 5-dehydrogenase BF25_2371 PF02638 Glycosyl hydrolase-like 10 BF25_2376 PF04542 Sigma-70 region 2 BF25_2376 PF08281 Sigma-70, region 4 BF25_2376 PF12680 SnoaL-like domain BF25_2377 PF00890 FAD binding domain BF25_238 PF01578 Cytochrome C assembly protein BF25_2381 PF07883 Cupin domain BF25_2381 PF01381 Helix-turn-helix BF25_2382 PF01810 LysE type translocator BF25_2385 PF00005 ABC transporter BF25_2385 PF00664 ABC transporter transmembrane region BF25_2386 PF00664 ABC transporter transmembrane region BF25_2386 PF00005 ABC transporter BF25_2389 PF03475 3-alpha domain BF25_2389 PF03473 MOSC domain BF25_239 PF03900 Porphobilinogen deaminase, C-terminal domain BF25_239 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BF25_2390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF25_2390 PF03466 LysR substrate binding domain BF25_2393 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF25_2393 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF25_2394 PF03466 LysR substrate binding domain BF25_2394 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF25_24 PF12796 Ankyrin repeats (3 copies) BF25_240 PF02602 Uroporphyrinogen-III synthase HemD BF25_2406 PF00313 'Cold-shock' DNA-binding domain BF25_2408 PF13302 Acetyltransferase (GNAT) domain BF25_241 PF00490 Delta-aminolevulinic acid dehydratase BF25_2416 PF00583 Acetyltransferase (GNAT) family BF25_2419 PF00302 Chloramphenicol acetyltransferase BF25_242 PF00202 Aminotransferase class-III BF25_2421 PF03176 MMPL family BF25_2423 PF00753 Metallo-beta-lactamase superfamily BF25_2423 PF16123 Hydroxyacylglutathione hydrolase C-terminus BF25_243 PF01476 LysM domain BF25_2432 PF13649 Methyltransferase domain BF25_2437 PF07690 Major Facilitator Superfamily BF25_2438 PF12146 Serine aminopeptidase, S33 BF25_2442 PF03129 Anticodon binding domain BF25_2442 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF25_2442 PF02824 TGS domain BF25_2442 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF25_2443 PF00849 RNA pseudouridylate synthase BF25_2443 PF01479 S4 domain BF25_2444 PF16291 Domain of unknown function (DUF4937 BF25_2447 PF01235 Sodium:alanine symporter family BF25_2448 PF00082 Subtilase family BF25_2449 PF05163 DinB family BF25_245 PF10458 Valyl tRNA synthetase tRNA binding arm BF25_245 PF08264 Anticodon-binding domain of tRNA BF25_245 PF00133 tRNA synthetases class I (I, L, M and V) BF25_2451 PF00216 Bacterial DNA-binding protein BF25_2454 PF07690 Major Facilitator Superfamily BF25_2455 PF03621 MbtH-like protein BF25_2456 PF00501 AMP-binding enzyme BF25_2456 PF13193 AMP-binding enzyme C-terminal domain BF25_2456 PF00975 Thioesterase domain BF25_2456 PF00668 Condensation domain BF25_2456 PF00550 Phosphopantetheine attachment site BF25_2457 PF00550 Phosphopantetheine attachment site BF25_2457 PF00857 Isochorismatase family BF25_2458 PF00501 AMP-binding enzyme BF25_2458 PF13193 AMP-binding enzyme C-terminal domain BF25_2459 PF00425 chorismate binding enzyme BF25_246 PF08245 Mur ligase middle domain BF25_246 PF02875 Mur ligase family, glutamate ligase domain BF25_2460 PF00106 short chain dehydrogenase BF25_2461 PF07690 Major Facilitator Superfamily BF25_2463 PF01022 Bacterial regulatory protein, arsR family BF25_2465 PF13476 AAA domain BF25_2466 PF12320 Type 5 capsule protein repressor C-terminal domain BF25_2466 PF00149 Calcineurin-like phosphoesterase BF25_2467 PF10763 Protein of unknown function (DUF2584) BF25_2469 PF00378 Enoyl-CoA hydratase/isomerase BF25_2470 PF01810 LysE type translocator BF25_2471 PF00171 Aldehyde dehydrogenase family BF25_2472 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BF25_2472 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF25_2473 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF25_2473 PF02770 Acyl-CoA dehydrogenase, middle domain BF25_2473 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF25_2475 PF03972 MmgE/PrpD family BF25_2476 PF00285 Citrate synthase, C-terminal domain BF25_2477 PF01521 Iron-sulphur cluster biosynthesis BF25_2478 PF07690 Major Facilitator Superfamily BF25_2479 PF00912 Transglycosylase BF25_2479 PF00905 Penicillin binding protein transpeptidase domain BF25_248 PF02545 Maf-like protein BF25_2483 PF10676 Spore germination protein gerPA/gerPF BF25_249 PF04002 RadC-like JAB domain BF25_25 PF13426 PAS domain BF25_25 PF00672 HAMP domain BF25_25 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_25 PF00512 His Kinase A (phospho-acceptor) domain BF25_2503 PF04471 Restriction endonuclease BF25_2505 PF00150 Cellulase (glycosyl hydrolase family 5) BF25_2505 PF03424 Carbohydrate binding domain (family 17/28) BF25_2505 PF00395 S-layer homology domain BF25_2506 PF14436 Bacterial EndoU nuclease BF25_2506 PF04740 LXG domain of WXG superfamily BF25_2508 PF00085 Thioredoxin BF25_2509 PF01569 PAP2 superfamily BF25_251 PF04085 rod shape-determining protein MreC BF25_2510 PF16916 Dimerisation domain of Zinc Transporter BF25_2510 PF01545 Cation efflux family BF25_2511 PF07070 SpoOM protein BF25_2514 PF14162 YozD-like protein BF25_2517 PF06855 YozE SAM-like fold BF25_2518 PF14122 YokU-like protein, putative antitoxin BF25_2519 PF12544 Lysine-2,3-aminomutase BF25_2520 PF00158 Sigma-54 interaction domain BF25_2520 PF13426 PAS domain BF25_2520 PF02954 Bacterial regulatory protein, Fis family BF25_2521 PF00583 Acetyltransferase (GNAT) family BF25_2522 PF01546 Peptidase family M20/M25/M40 BF25_2522 PF07687 Peptidase dimerisation domain BF25_2523 PF01144 Coenzyme A transferase BF25_2524 PF01144 Coenzyme A transferase BF25_2525 PF00202 Aminotransferase class-III BF25_2527 PF09385 Histidine kinase N terminal BF25_2528 PF07997 Protein of unknown function (DUF1694) BF25_2529 PF00171 Aldehyde dehydrogenase family BF25_253 PF03775 Septum formation inhibitor MinC, C-terminal domain BF25_2530 PF01595 Cyclin M transmembrane N-terminal domain BF25_2530 PF03471 Transporter associated domain BF25_2530 PF00571 CBS domain BF25_2536 PF13520 Amino acid permease BF25_2537 PF00528 Binding-protein-dependent transport system inner membrane component BF25_2538 PF00571 CBS domain BF25_2538 PF00005 ABC transporter BF25_254 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BF25_2541 PF03358 NADPH-dependent FMN reductase BF25_2544 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF25_2544 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF25_2545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF25_2545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF25_2549 PF00144 Beta-lactamase BF25_255 PF01551 Peptidase family M23 BF25_2552 PF08240 Alcohol dehydrogenase GroES-like domain BF25_2552 PF00107 Zinc-binding dehydrogenase BF25_2553 PF01418 Helix-turn-helix domain, rpiR family BF25_2553 PF01380 SIS domain BF25_2555 PF00072 Response regulator receiver domain BF25_2555 PF00196 Bacterial regulatory proteins, luxR family BF25_2556 PF13185 GAF domain BF25_2556 PF07730 Histidine kinase BF25_2557 PF00924 Mechanosensitive ion channel BF25_2558 PF00011 Hsp20/alpha crystallin family BF25_2559 PF00293 NUDIX domain BF25_256 PF02163 Peptidase family M50 BF25_2560 PF00857 Isochorismatase family BF25_2563 PF00881 Nitroreductase family BF25_2564 PF01063 Amino-transferase class IV BF25_2565 PF01497 Periplasmic binding protein BF25_2569 PF13537 Glutamine amidotransferase domain BF25_2569 PF00733 Asparagine synthase BF25_257 PF10150 Ribonuclease E/G family BF25_257 PF00575 S1 RNA binding domain BF25_2570 PF00011 Hsp20/alpha crystallin family BF25_2571 PF02630 SCO1/SenC BF25_2573 PF02645 Uncharacterised protein, DegV family COG1307 BF25_2575 PF00902 Sec-independent protein translocase protein (TatC) BF25_2576 PF02416 mttA/Hcf106 family BF25_2577 PF03006 Haemolysin-III related BF25_2578 PF01553 Acyltransferase BF25_2579 PF02525 Flavodoxin-like fold BF25_258 PF00829 Ribosomal prokaryotic L21 protein BF25_2580 PF03717 Penicillin-binding Protein dimerisation domain BF25_2580 PF05223 NTF2-like N-terminal transpeptidase domain BF25_2580 PF00905 Penicillin binding protein transpeptidase domain BF25_2581 PF00186 Dihydrofolate reductase BF25_2582 PF00303 Thymidylate synthase BF25_2583 PF07930 D-aminopeptidase, domain B BF25_2583 PF00144 Beta-lactamase BF25_2587 PF13419 Haloacid dehalogenase-like hydrolase BF25_2588 PF14005 YpjP-like protein BF25_2589 PF05975 Bacterial ABC transporter protein EcsB BF25_259 PF04327 Cysteine protease Prp BF25_2590 PF00005 ABC transporter BF25_2594 PF00583 Acetyltransferase (GNAT) family BF25_2595 PF01980 tRNA-methyltransferase O BF25_2596 PF01177 Asp/Glu/Hydantoin racemase BF25_2597 PF00465 Iron-containing alcohol dehydrogenase BF25_2599 PF13419 Haloacid dehalogenase-like hydrolase BF25_26 PF00486 Transcriptional regulatory protein, C terminal BF25_26 PF00072 Response regulator receiver domain BF25_260 PF01016 Ribosomal L27 protein BF25_2600 PF10997 Alternate to MurJ BF25_2603 PF00209 Sodium:neurotransmitter symporter family BF25_2606 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_2606 PF00512 His Kinase A (phospho-acceptor) domain BF25_2606 PF00672 HAMP domain BF25_2607 PF00486 Transcriptional regulatory protein, C terminal BF25_2607 PF00072 Response regulator receiver domain BF25_2608 PF00939 Sodium:sulfate symporter transmembrane region BF25_2609 PF02595 Glycerate kinase family BF25_261 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF25_261 PF14682 Sporulation initiation phospho-transferase B, C-terminal BF25_262 PF09269 Domain of unknown function (DUF1967) BF25_262 PF01018 GTP1/OBG BF25_262 PF01926 50S ribosome-binding GTPase BF25_2628 PF12538 DNA transporter BF25_2628 PF01580 FtsK/SpoIIIE family BF25_263 PF00072 Response regulator receiver domain BF25_263 PF00486 Transcriptional regulatory protein, C terminal BF25_2632 PF00152 tRNA synthetases class II (D, K and N) BF25_2632 PF01336 OB-fold nucleic acid binding domain BF25_2633 PF01225 Mur ligase family, catalytic domain BF25_2633 PF02875 Mur ligase family, glutamate ligase domain BF25_2633 PF08245 Mur ligase middle domain BF25_2636 PF08264 Anticodon-binding domain of tRNA BF25_2636 PF00133 tRNA synthetases class I (I, L, M and V) BF25_2642 PF00750 tRNA synthetases class I (R) BF25_2642 PF05746 DALR anticodon binding domain BF25_2642 PF03485 Arginyl tRNA synthetase N terminal domain BF25_2643 PF04445 Putative SAM-dependent methyltransferase BF25_2644 PF06491 Disulphide isomerase BF25_2646 PF08712 Scaffold protein Nfu/NifU N terminal BF25_2646 PF13769 Virulence factor BF25_2647 PF01494 FAD binding domain BF25_2648 PF01494 FAD binding domain BF25_2649 PF00440 Bacterial regulatory proteins, tetR family BF25_265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_2650 PF00436 Single-strand binding protein family BF25_2653 PF00005 ABC transporter BF25_2653 PF12848 ABC transporter BF25_2653 PF16326 ABC transporter C-terminal domain BF25_2654 PF01966 HD domain BF25_2657 PF01510 N-acetylmuramoyl-L-alanine amidase BF25_266 PF00005 ABC transporter BF25_2660 PF04232 Stage V sporulation protein S (SpoVS) BF25_2667 PF04405 Domain of Unknown function (DUF542) BF25_2667 PF01814 Hemerythrin HHE cation binding domain BF25_2668 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_2668 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BF25_2668 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BF25_2668 PF04324 BFD-like [2Fe-2S] binding domain BF25_2668 PF18267 Rubredoxin NAD+ reductase C-terminal domain BF25_2669 PF00355 Rieske [2Fe-2S] domain BF25_267 PF02687 FtsX-like permease family BF25_2670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF25_2671 PF01903 CbiX BF25_2675 PF07690 Major Facilitator Superfamily BF25_2677 PF02391 MoaE protein BF25_2678 PF00994 Probable molybdopterin binding domain BF25_2678 PF03454 MoeA C-terminal region (domain IV) BF25_2678 PF03453 MoeA N-terminal region (domain I and II) BF25_2679 PF00899 ThiF family BF25_268 PF02687 FtsX-like permease family BF25_2680 PF04055 Radical SAM superfamily BF25_2680 PF06463 Molybdenum Cofactor Synthesis C BF25_2681 PF00325 Bacterial regulatory proteins, crp family BF25_2681 PF00027 Cyclic nucleotide-binding domain BF25_2683 PF00005 ABC transporter BF25_2684 PF00392 Bacterial regulatory proteins, gntR family BF25_2684 PF00155 Aminotransferase class I and II BF25_2685 PF02665 Nitrate reductase gamma subunit BF25_2686 PF02613 Nitrate reductase delta subunit BF25_2687 PF14711 Respiratory nitrate reductase beta C-terminal BF25_2687 PF13247 4Fe-4S dicluster domain BF25_2688 PF14710 Respiratory nitrate reductase alpha N-terminal BF25_2688 PF01568 Molydopterin dinucleotide binding domain BF25_2688 PF00384 Molybdopterin oxidoreductase BF25_269 PF00800 Prephenate dehydratase BF25_269 PF01842 ACT domain BF25_2691 PF07726 ATPase family associated with various cellular activities (AAA) BF25_2691 PF17863 AAA lid domain BF25_2692 PF01882 Protein of unknown function DUF58 BF25_2693 PF11992 Domain of unknown function (DUF3488) BF25_2693 PF13559 Domain of unknown function (DUF4129) BF25_2693 PF01841 Transglutaminase-like superfamily BF25_2694 PF00255 Glutathione peroxidase BF25_2699 PF08281 Sigma-70, region 4 BF25_2699 PF04542 Sigma-70 region 2 BF25_270 PF03473 MOSC domain BF25_270 PF03475 3-alpha domain BF25_2700 PF08240 Alcohol dehydrogenase GroES-like domain BF25_2700 PF00107 Zinc-binding dehydrogenase BF25_2702 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_2703 PF01261 Xylose isomerase-like TIM barrel BF25_2704 PF00271 Helicase conserved C-terminal domain BF25_2704 PF00270 DEAD/DEAH box helicase BF25_2706 PF01268 Formate--tetrahydrofolate ligase BF25_2707 PF01209 ubiE/COQ5 methyltransferase family BF25_271 PF02829 3H domain BF25_271 PF08279 HTH domain BF25_2712 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BF25_272 PF00266 Aminotransferase class-V BF25_2721 PF00583 Acetyltransferase (GNAT) family BF25_2727 PF00155 Aminotransferase class I and II BF25_2727 PF00392 Bacterial regulatory proteins, gntR family BF25_2728 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF25_2728 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF25_2729 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BF25_273 PF00890 FAD binding domain BF25_273 PF02910 Fumarate reductase flavoprotein C-term BF25_2733 PF00842 Alanine racemase, C-terminal domain BF25_2733 PF01168 Alanine racemase, N-terminal domain BF25_2736 PF00300 Histidine phosphatase superfamily (branch 1) BF25_2737 PF01145 SPFH domain / Band 7 family BF25_2739 PF07690 Major Facilitator Superfamily BF25_274 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BF25_274 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BF25_2740 PF01425 Amidase BF25_2742 PF02557 D-alanyl-D-alanine carboxypeptidase BF25_2744 PF07454 Stage II sporulation protein P (SpoIIP) BF25_2748 PF01588 Putative tRNA binding domain BF25_2749 PF05525 Branched-chain amino acid transport protein BF25_275 PF02445 Quinolinate synthetase A protein BF25_2752 PF00571 CBS domain BF25_2752 PF01595 Cyclin M transmembrane N-terminal domain BF25_2752 PF03471 Transporter associated domain BF25_2753 PF04306 Protein of unknown function (DUF456) BF25_2754 PF13460 NAD(P)H-binding BF25_2757 PF13396 Phospholipase_D-nuclease N-terminal BF25_2757 PF13091 PLD-like domain BF25_2759 PF03061 Thioesterase superfamily BF25_276 PF01476 LysM domain BF25_2760 PF09323 Domain of unknown function (DUF1980) BF25_2761 PF03773 Predicted permease BF25_2763 PF14667 Polysaccharide biosynthesis C-terminal domain BF25_2763 PF01943 Polysaccharide biosynthesis protein BF25_2764 PF09335 SNARE associated Golgi protein BF25_2765 PF00293 NUDIX domain BF25_2766 PF08757 CotH kinase protein BF25_2768 PF00300 Histidine phosphatase superfamily (branch 1) BF25_2770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_2771 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_2773 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BF25_2773 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BF25_2774 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BF25_2775 PF13460 NAD(P)H-binding BF25_2777 PF01297 Zinc-uptake complex component A periplasmic BF25_2777 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BF25_2788 PF00583 Acetyltransferase (GNAT) family BF25_2789 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF25_2789 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF25_279 PF01022 Bacterial regulatory protein, arsR family BF25_2790 PF00248 Aldo/keto reductase family BF25_2792 PF01593 Flavin containing amine oxidoreductase BF25_2794 PF00296 Luciferase-like monooxygenase BF25_2797 PF00210 Ferritin-like domain BF25_28 PF00850 Histone deacetylase domain BF25_280 PF00892 EamA-like transporter family BF25_2801 PF00672 HAMP domain BF25_2801 PF02743 Cache domain BF25_2801 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF25_2802 PF03193 RsgA GTPase BF25_2806 PF07690 Major Facilitator Superfamily BF25_2807 PF00248 Aldo/keto reductase family BF25_2808 PF01022 Bacterial regulatory protein, arsR family BF25_2809 PF00082 Subtilase family BF25_281 PF00892 EamA-like transporter family BF25_2810 PF18277 AbrB C-terminal domain BF25_2810 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF25_2811 PF02687 FtsX-like permease family BF25_2812 PF02687 FtsX-like permease family BF25_2813 PF02540 NAD synthase BF25_2814 PF13344 Haloacid dehalogenase-like hydrolase BF25_2814 PF00293 NUDIX domain BF25_2819 PF01734 Patatin-like phospholipase BF25_2821 PF01810 LysE type translocator BF25_2822 PF07690 Major Facilitator Superfamily BF25_2823 PF07690 Major Facilitator Superfamily BF25_2824 PF07690 Major Facilitator Superfamily BF25_2825 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF25_2826 PF01261 Xylose isomerase-like TIM barrel BF25_2829 PF13193 AMP-binding enzyme C-terminal domain BF25_2829 PF00501 AMP-binding enzyme BF25_283 PF01497 Periplasmic binding protein BF25_2830 PF04183 IucA / IucC family BF25_2830 PF06276 Ferric iron reductase FhuF-like transporter BF25_2831 PF04183 IucA / IucC family BF25_2831 PF06276 Ferric iron reductase FhuF-like transporter BF25_2832 PF00583 Acetyltransferase (GNAT) family BF25_2833 PF02308 MgtC family BF25_2835 PF01522 Polysaccharide deacetylase BF25_2836 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_2836 PF00989 PAS fold BF25_2836 PF00512 His Kinase A (phospho-acceptor) domain BF25_2836 PF16736 Single Cache-like BF25_2837 PF00072 Response regulator receiver domain BF25_2837 PF00486 Transcriptional regulatory protein, C terminal BF25_2839 PF03816 Cell envelope-related transcriptional attenuator domain BF25_284 PF01330 RuvA N terminal domain BF25_284 PF07499 RuvA, C-terminal domain BF25_2842 PF08544 GHMP kinases C terminal BF25_2842 PF00288 GHMP kinases N terminal domain BF25_2843 PF00291 Pyridoxal-phosphate dependent enzyme BF25_2844 PF01842 ACT domain BF25_2844 PF03447 Homoserine dehydrogenase, NAD binding domain BF25_2844 PF00742 Homoserine dehydrogenase BF25_2848 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BF25_2848 PF01522 Polysaccharide deacetylase BF25_2849 PF04439 Streptomycin adenylyltransferase BF25_285 PF17864 RuvB AAA lid domain BF25_285 PF05496 Holliday junction DNA helicase RuvB P-loop domain BF25_285 PF05491 RuvB C-terminal winged helix domain BF25_2850 PF00106 short chain dehydrogenase BF25_2852 PF16736 Single Cache-like BF25_2852 PF00989 PAS fold BF25_2852 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_2852 PF00512 His Kinase A (phospho-acceptor) domain BF25_2853 PF00072 Response regulator receiver domain BF25_2853 PF00486 Transcriptional regulatory protein, C terminal BF25_2854 PF00005 ABC transporter BF25_2854 PF00664 ABC transporter transmembrane region BF25_2855 PF00005 ABC transporter BF25_2855 PF00664 ABC transporter transmembrane region BF25_2857 PF01476 LysM domain BF25_2857 PF00877 NlpC/P60 family BF25_2859 PF00768 D-alanyl-D-alanine carboxypeptidase BF25_2859 PF07943 Penicillin-binding protein 5, C-terminal domain BF25_286 PF11146 Protein of unknown function (DUF2905) BF25_2860 PF02016 LD-carboxypeptidase N-terminal domain BF25_2860 PF17676 LD-carboxypeptidase C-terminal domain BF25_2863 PF00664 ABC transporter transmembrane region BF25_2863 PF00005 ABC transporter BF25_2864 PF00664 ABC transporter transmembrane region BF25_2864 PF00005 ABC transporter BF25_2865 PF02322 Cytochrome bd terminal oxidase subunit II BF25_2866 PF01654 Cytochrome bd terminal oxidase subunit I BF25_2868 PF01047 MarR family BF25_287 PF02547 Queuosine biosynthesis protein BF25_2870 PF14552 Tautomerase enzyme BF25_2872 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF25_2872 PF03466 LysR substrate binding domain BF25_2874 PF02653 Branched-chain amino acid transport system / permease component BF25_2875 PF00005 ABC transporter BF25_2876 PF12399 Branched-chain amino acid ATP-binding cassette transporter BF25_2876 PF00005 ABC transporter BF25_2878 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF25_2878 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF25_2879 PF01575 MaoC like domain BF25_288 PF01702 Queuine tRNA-ribosyltransferase BF25_2880 PF13193 AMP-binding enzyme C-terminal domain BF25_2880 PF00501 AMP-binding enzyme BF25_2883 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF25_2883 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF25_2884 PF01593 Flavin containing amine oxidoreductase BF25_2885 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF25_2885 PF00056 lactate/malate dehydrogenase, NAD binding domain BF25_2886 PF01594 AI-2E family transporter BF25_2887 PF01425 Amidase BF25_2889 PF00881 Nitroreductase family BF25_289 PF02699 Preprotein translocase subunit BF25_2890 PF01323 DSBA-like thioredoxin domain BF25_2891 PF02082 Transcriptional regulator BF25_2892 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF25_2892 PF03466 LysR substrate binding domain BF25_2893 PF00892 EamA-like transporter family BF25_2895 PF07987 Domain of unkown function (DUF1775) BF25_2896 PF04234 CopC domain BF25_2896 PF05425 Copper resistance protein D BF25_2896 PF13115 YtkA-like BF25_2898 PF05525 Branched-chain amino acid transport protein BF25_2899 PF05525 Branched-chain amino acid transport protein BF25_29 PF00571 CBS domain BF25_2900 PF02525 Flavodoxin-like fold BF25_2905 PF01551 Peptidase family M23 BF25_2906 PF07732 Multicopper oxidase BF25_2906 PF07731 Multicopper oxidase BF25_2907 PF05195 Aminopeptidase P, N-terminal domain BF25_2907 PF00557 Metallopeptidase family M24 BF25_291 PF04239 Protein of unknown function (DUF421) BF25_2911 PF05979 Bacterial protein of unknown function (DUF896) BF25_2912 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF25_2913 PF00591 Glycosyl transferase family, a/b domain BF25_2913 PF02885 Glycosyl transferase family, helical bundle domain BF25_2913 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BF25_2914 PF07662 Na+ dependent nucleoside transporter C-terminus BF25_2914 PF01773 Na+ dependent nucleoside transporter N-terminus BF25_2915 PF01791 DeoC/LacD family aldolase BF25_2916 PF04198 Putative sugar-binding domain BF25_2918 PF05791 Bacillus haemolytic enterotoxin (HBL) BF25_2919 PF05791 Bacillus haemolytic enterotoxin (HBL) BF25_292 PF01943 Polysaccharide biosynthesis protein BF25_292 PF14667 Polysaccharide biosynthesis C-terminal domain BF25_2921 PF13520 Amino acid permease BF25_2922 PF13520 Amino acid permease BF25_2924 PF08546 Ketopantoate reductase PanE/ApbA C terminal BF25_2924 PF02558 Ketopantoate reductase PanE/ApbA BF25_2927 PF01566 Natural resistance-associated macrophage protein BF25_2929 PF00512 His Kinase A (phospho-acceptor) domain BF25_2929 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_293 PF13797 Post-transcriptional regulator BF25_2931 PF00072 Response regulator receiver domain BF25_2931 PF00486 Transcriptional regulatory protein, C terminal BF25_2932 PF13302 Acetyltransferase (GNAT) domain BF25_2933 PF13186 Iron-sulfur cluster-binding domain BF25_2933 PF04055 Radical SAM superfamily BF25_2938 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_2939 PF12146 Serine aminopeptidase, S33 BF25_2939 PF13026 Protein of unknown function (DUF3887) BF25_294 PF02355 Protein export membrane protein BF25_294 PF07549 SecD/SecF GG Motif BF25_2940 PF01979 Amidohydrolase family BF25_2943 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BF25_2943 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BF25_2944 PF00072 Response regulator receiver domain BF25_2944 PF04397 LytTr DNA-binding domain BF25_2946 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BF25_2947 PF07690 Major Facilitator Superfamily BF25_295 PF01545 Cation efflux family BF25_295 PF16916 Dimerisation domain of Zinc Transporter BF25_2950 PF09587 Bacterial capsule synthesis protein PGA_cap BF25_2952 PF00585 C-terminal regulatory domain of Threonine dehydratase BF25_2952 PF00291 Pyridoxal-phosphate dependent enzyme BF25_2953 PF00920 Dehydratase family BF25_2954 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BF25_2954 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BF25_2955 PF10369 Small subunit of acetolactate synthase BF25_2956 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF25_2956 PF00205 Thiamine pyrophosphate enzyme, central domain BF25_2956 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF25_2957 PF01063 Amino-transferase class IV BF25_2959 PF01625 Peptide methionine sulfoxide reductase BF25_296 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BF25_296 PF01368 DHH family BF25_296 PF17768 RecJ OB domain BF25_296 PF02272 DHHA1 domain BF25_2963 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF25_2963 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BF25_2966 PF04239 Protein of unknown function (DUF421) BF25_2968 PF00457 Glycosyl hydrolases family 11 BF25_2968 PF01522 Polysaccharide deacetylase BF25_2968 PF03422 Carbohydrate binding module (family 6) BF25_2969 PF00209 Sodium:neurotransmitter symporter family BF25_297 PF00156 Phosphoribosyl transferase domain BF25_2970 PF01943 Polysaccharide biosynthesis protein BF25_2970 PF14667 Polysaccharide biosynthesis C-terminal domain BF25_2973 PF00291 Pyridoxal-phosphate dependent enzyme BF25_2974 PF07690 Major Facilitator Superfamily BF25_2975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_2977 PF13167 GTP-binding GTPase N-terminal BF25_2977 PF16360 GTP-binding GTPase Middle Region BF25_2977 PF01926 50S ribosome-binding GTPase BF25_2979 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF25_2979 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF25_298 PF13291 ACT domain BF25_298 PF02824 TGS domain BF25_298 PF04607 Region found in RelA / SpoT proteins BF25_2980 PF07690 Major Facilitator Superfamily BF25_2981 PF07690 Major Facilitator Superfamily BF25_2982 PF03976 Polyphosphate kinase 2 (PPK2) BF25_2983 PF02554 Carbon starvation protein CstA BF25_2986 PF07690 Major Facilitator Superfamily BF25_2988 PF13205 Bacterial Ig-like domain BF25_2988 PF00395 S-layer homology domain BF25_2988 PF02368 Bacterial Ig-like domain (group 2) BF25_2989 PF00293 NUDIX domain BF25_299 PF02580 D-Tyr-tRNA(Tyr) deacylase BF25_2990 PF14158 YndJ-like protein BF25_2991 PF13761 Domain of unknown function (DUF4166) BF25_2994 PF13840 ACT domain BF25_2994 PF00696 Amino acid kinase family BF25_2998 PF03590 Aspartate-ammonia ligase BF25_3 PF07285 Protein of unknown function (DUF1444) BF25_30 PF00583 Acetyltransferase (GNAT) family BF25_3000 PF04434 SWIM zinc finger BF25_3000 PF00176 SNF2 family N-terminal domain BF25_3000 PF00271 Helicase conserved C-terminal domain BF25_3001 PF08664 YcbB domain BF25_3001 PF00072 Response regulator receiver domain BF25_3002 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_3003 PF03949 Malic enzyme, NAD binding domain BF25_3003 PF00390 Malic enzyme, N-terminal domain BF25_3004 PF00206 Lyase BF25_3004 PF10415 Fumarase C C-terminus BF25_3005 PF00375 Sodium:dicarboxylate symporter family BF25_3006 PF00696 Amino acid kinase family BF25_3007 PF13091 PLD-like domain BF25_301 PF03129 Anticodon binding domain BF25_301 PF13393 Histidyl-tRNA synthetase BF25_3010 PF00005 ABC transporter BF25_3011 PF07730 Histidine kinase BF25_3011 PF13185 GAF domain BF25_3011 PF13492 GAF domain BF25_3011 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_3012 PF00196 Bacterial regulatory proteins, luxR family BF25_3012 PF00072 Response regulator receiver domain BF25_3017 PF04286 Protein of unknown function (DUF445) BF25_3018 PF00291 Pyridoxal-phosphate dependent enzyme BF25_302 PF00152 tRNA synthetases class II (D, K and N) BF25_302 PF02938 GAD domain BF25_302 PF01336 OB-fold nucleic acid binding domain BF25_3023 PF00578 AhpC/TSA family BF25_3024 PF02683 Cytochrome C biogenesis protein transmembrane region BF25_3028 PF03575 Peptidase family S51 BF25_3029 PF01554 MatE BF25_303 PF00899 ThiF family BF25_3030 PF01554 MatE BF25_3034 PF10415 Fumarase C C-terminus BF25_3034 PF00206 Lyase BF25_3035 PF03553 Na+/H+ antiporter family BF25_3036 PF00535 Glycosyl transferase family 2 BF25_3038 PF03773 Predicted permease BF25_3039 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF25_3039 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF25_3040 PF00892 EamA-like transporter family BF25_3041 PF00392 Bacterial regulatory proteins, gntR family BF25_3041 PF07729 FCD domain BF25_3043 PF01545 Cation efflux family BF25_3043 PF16916 Dimerisation domain of Zinc Transporter BF25_3047 PF00733 Asparagine synthase BF25_3047 PF13537 Glutamine amidotransferase domain BF25_305 PF16193 AAA C-terminal domain BF25_305 PF12002 MgsA AAA+ ATPase C terminal BF25_305 PF05496 Holliday junction DNA helicase RuvB P-loop domain BF25_3054 PF00300 Histidine phosphatase superfamily (branch 1) BF25_3056 PF00768 D-alanyl-D-alanine carboxypeptidase BF25_3056 PF07943 Penicillin-binding protein 5, C-terminal domain BF25_3059 PF10787 Uncharacterised protein from bacillus cereus group BF25_306 PF02082 Transcriptional regulator BF25_3061 PF00753 Metallo-beta-lactamase superfamily BF25_3061 PF12706 Beta-lactamase superfamily domain BF25_3062 PF00528 Binding-protein-dependent transport system inner membrane component BF25_3064 PF00005 ABC transporter BF25_3064 PF08402 TOBE domain BF25_3069 PF08141 Small acid-soluble spore protein H family BF25_307 PF00266 Aminotransferase class-V BF25_3070 PF03992 Antibiotic biosynthesis monooxygenase BF25_3073 PF17329 Family of unknown function (DUF5367) BF25_3074 PF00440 Bacterial regulatory proteins, tetR family BF25_3074 PF17932 Tetracyclin repressor-like, C-terminal domain BF25_3079 PF02272 DHHA1 domain BF25_3079 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF25_3079 PF01411 tRNA synthetases class II (A) BF25_3080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF25_3080 PF00460 Flagella basal body rod protein BF25_3083 PF00771 FHIPEP family BF25_3084 PF01312 FlhB HrpN YscU SpaS Family BF25_3086 PF01313 Bacterial export proteins, family 3 BF25_3087 PF00813 FliP family BF25_3089 PF04509 CheC-like family BF25_3089 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF25_3091 PF02154 Flagellar motor switch protein FliM BF25_3091 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF25_3092 PF01464 Transglycosylase SLT domain BF25_3093 PF00669 Bacterial flagellin N-terminal helical region BF25_3093 PF00700 Bacterial flagellin C-terminal helical region BF25_3098 PF13181 Tetratricopeptide repeat BF25_3098 PF00535 Glycosyl transferase family 2 BF25_31 PF13193 AMP-binding enzyme C-terminal domain BF25_31 PF00501 AMP-binding enzyme BF25_310 PF14490 Helix-hairpin-helix containing domain BF25_310 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BF25_310 PF13538 UvrD-like helicase C-terminal domain BF25_3104 PF00535 Glycosyl transferase family 2 BF25_3105 PF12181 DNA binding domain of the motility gene repressor (MogR) BF25_3106 PF01584 CheW-like domain BF25_3106 PF00072 Response regulator receiver domain BF25_3107 PF01584 CheW-like domain BF25_3107 PF00072 Response regulator receiver domain BF25_3111 PF00460 Flagella basal body rod protein BF25_3111 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF25_3111 PF07559 Flagellar basal body protein FlaE BF25_3116 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF25_3116 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF25_3116 PF18269 T3SS EscN ATPase C-terminal domain BF25_3118 PF14842 FliG N-terminal domain BF25_3118 PF14841 FliG middle domain BF25_3118 PF01706 FliG C-terminal domain BF25_3120 PF08345 Flagellar M-ring protein C-terminal BF25_3120 PF01514 Secretory protein of YscJ/FliF family BF25_3121 PF02049 Flagellar hook-basal body complex protein FliE BF25_3122 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF25_3122 PF00460 Flagella basal body rod protein BF25_3123 PF00460 Flagella basal body rod protein BF25_3128 PF00700 Bacterial flagellin C-terminal helical region BF25_3128 PF00669 Bacterial flagellin N-terminal helical region BF25_3129 PF00460 Flagella basal body rod protein BF25_3129 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF25_3133 PF01739 CheR methyltransferase, SAM binding domain BF25_3133 PF03705 CheR methyltransferase, all-alpha domain BF25_3136 PF04509 CheC-like family BF25_3136 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF25_3137 PF02895 Signal transducing histidine kinase, homodimeric domain BF25_3137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_3137 PF01584 CheW-like domain BF25_3137 PF07194 P2 response regulator binding domain BF25_3137 PF01627 Hpt domain BF25_3138 PF01584 CheW-like domain BF25_3138 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_3138 PF01627 Hpt domain BF25_3138 PF07194 P2 response regulator binding domain BF25_3138 PF02895 Signal transducing histidine kinase, homodimeric domain BF25_3139 PF00072 Response regulator receiver domain BF25_314 PF01594 AI-2E family transporter BF25_3140 PF13677 Membrane MotB of proton-channel complex MotA/MotB BF25_3140 PF00691 OmpA family BF25_3141 PF01618 MotA/TolQ/ExbB proton channel family BF25_3143 PF17209 Hfq protein BF25_3152 PF00881 Nitroreductase family BF25_3154 PF02698 DUF218 domain BF25_3155 PF04239 Protein of unknown function (DUF421) BF25_3157 PF13411 MerR HTH family regulatory protein BF25_3157 PF06445 GyrI-like small molecule binding domain BF25_3158 PF17770 Ribonuclease J C-terminal domain BF25_3158 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BF25_3158 PF00753 Metallo-beta-lactamase superfamily BF25_3159 PF00999 Sodium/hydrogen exchanger family BF25_316 PF02272 DHHA1 domain BF25_316 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF25_316 PF01411 tRNA synthetases class II (A) BF25_3161 PF00202 Aminotransferase class-III BF25_3162 PF00474 Sodium:solute symporter family BF25_3163 PF04341 Protein of unknown function, DUF485 BF25_3166 PF01810 LysE type translocator BF25_3168 PF00313 'Cold-shock' DNA-binding domain BF25_317 PF06135 IreB regulatory phosphoprotein BF25_3173 PF01263 Aldose 1-epimerase BF25_3174 PF13456 Reverse transcriptase-like BF25_3178 PF13673 Acetyltransferase (GNAT) domain BF25_3178 PF18014 Acetyltransferase (GNAT) domain BF25_318 PF03652 Holliday junction resolvase BF25_3183 PF00535 Glycosyl transferase family 2 BF25_3186 PF02397 Bacterial sugar transferase BF25_319 PF06949 Protein of unknown function (DUF1292) BF25_3192 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BF25_3192 PF01367 5'-3' exonuclease, C-terminal SAM fold BF25_3193 PF00689 Cation transporting ATPase, C-terminus BF25_3193 PF00690 Cation transporter/ATPase, N-terminus BF25_3195 PF03738 Glutathionylspermidine synthase preATP-grasp BF25_3198 PF00581 Rhodanese-like domain BF25_3199 PF10752 Protein of unknown function (DUF2533) BF25_320 PF02618 YceG-like family BF25_3200 PF00583 Acetyltransferase (GNAT) family BF25_3202 PF00350 Dynamin family BF25_3204 PF04235 Protein of unknown function (DUF418) BF25_3205 PF00860 Permease family BF25_3206 PF00156 Phosphoribosyl transferase domain BF25_3207 PF00557 Metallopeptidase family M24 BF25_3208 PF01636 Phosphotransferase enzyme family BF25_3210 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BF25_3211 PF13307 Helicase C-terminal domain BF25_3213 PF02926 THUMP domain BF25_3213 PF01170 Putative RNA methylase family UPF0020 BF25_3214 PF05103 DivIVA protein BF25_3215 PF06908 YspA SLOG family BF25_3222 PF10720 Protein of unknown function (DUF2515) BF25_3223 PF03838 Recombination protein U BF25_3224 PF00905 Penicillin binding protein transpeptidase domain BF25_3224 PF00912 Transglycosylase BF25_3226 PF00633 Helix-hairpin-helix motif BF25_3226 PF10576 Iron-sulfur binding domain of endonuclease III BF25_3226 PF00730 HhH-GPD superfamily base excision DNA repair protein BF25_3227 PF07261 Replication initiation and membrane attachment BF25_3228 PF00155 Aminotransferase class I and II BF25_3230 PF14084 Protein of unknown function (DUF4264) BF25_3231 PF13307 Helicase C-terminal domain BF25_3231 PF00929 Exonuclease BF25_3231 PF04851 Type III restriction enzyme, res subunit BF25_3232 PF02261 Aspartate decarboxylase BF25_3233 PF02569 Pantoate-beta-alanine ligase BF25_3234 PF02548 Ketopantoate hydroxymethyltransferase BF25_3236 PF03099 Biotin/lipoate A/B protein ligase family BF25_3236 PF08279 HTH domain BF25_3236 PF02237 Biotin protein ligase C terminal domain BF25_3237 PF01743 Poly A polymerase head domain BF25_3237 PF12627 Probable RNA and SrmB- binding site of polymerase A BF25_3237 PF13735 tRNA nucleotidyltransferase domain 2 putative BF25_3238 PF13439 Glycosyltransferase Family 4 BF25_3238 PF00534 Glycosyl transferases group 1 BF25_3239 PF02585 GlcNAc-PI de-N-acetylase BF25_324 PF00485 Phosphoribulokinase / Uridine kinase family BF25_3240 PF02142 MGS-like domain BF25_3241 PF05173 Dihydrodipicolinate reductase, C-terminus BF25_3241 PF01113 Dihydrodipicolinate reductase, N-terminus BF25_3242 PF03819 MazG nucleotide pyrophosphohydrolase domain BF25_3243 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF25_3243 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF25_3245 PF04298 Putative neutral zinc metallopeptidase BF25_3246 PF09577 Sporulation protein YpjB (SpoYpjB) BF25_3248 PF07187 Protein of unknown function (DUF1405) BF25_3249 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BF25_3249 PF00032 Cytochrome b(C-terminal)/b6/petD BF25_325 PF03449 Transcription elongation factor, N-terminal BF25_325 PF01272 Transcription elongation factor, GreA/GreB, C-term BF25_3250 PF00033 Cytochrome b/b6/petB BF25_3251 PF00355 Rieske [2Fe-2S] domain BF25_3252 PF10673 Protein of unknown function (DUF2487) BF25_3253 PF08858 IDEAL domain BF25_3253 PF08864 UPF0302 domain BF25_3255 PF00155 Aminotransferase class I and II BF25_3256 PF01761 3-dehydroquinate synthase BF25_3257 PF01264 Chorismate synthase BF25_3258 PF00334 Nucleoside diphosphate kinase BF25_3259 PF00348 Polyprenyl synthetase BF25_326 PF03717 Penicillin-binding Protein dimerisation domain BF25_326 PF00905 Penicillin binding protein transpeptidase domain BF25_3260 PF01209 ubiE/COQ5 methyltransferase family BF25_3261 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BF25_3262 PF01227 GTP cyclohydrolase I BF25_3263 PF00216 Bacterial DNA-binding protein BF25_3264 PF09547 Stage IV sporulation protein A (spore_IV_A) BF25_3266 PF10966 Protein of unknown function (DUF2768) BF25_3268 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BF25_3268 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BF25_3269 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BF25_3269 PF01926 50S ribosome-binding GTPase BF25_3271 PF14045 YIEGIA protein BF25_3273 PF14140 YpzI-like protein BF25_3274 PF01070 FMN-dependent dehydrogenase BF25_3275 PF00575 S1 RNA binding domain BF25_3276 PF02224 Cytidylate kinase BF25_3278 PF00710 Asparaginase, N-terminal BF25_3278 PF17763 Glutaminase/Asparaginase C-terminal domain BF25_3283 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF25_3283 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BF25_3284 PF05389 Negative regulator of genetic competence (MecA) BF25_3285 PF02310 B12 binding domain BF25_3285 PF02607 B12 binding domain BF25_3285 PF13411 MerR HTH family regulatory protein BF25_3286 PF00149 Calcineurin-like phosphoesterase BF25_3288 PF02517 CPBP intramembrane metalloprotease BF25_3289 PF00271 Helicase conserved C-terminal domain BF25_3289 PF00270 DEAD/DEAH box helicase BF25_329 PF08241 Methyltransferase domain BF25_3290 PF14493 Helix-turn-helix domain BF25_3292 PF12822 ECF transporter, substrate-specific component BF25_3295 PF01923 Cobalamin adenosyltransferase BF25_3296 PF00512 His Kinase A (phospho-acceptor) domain BF25_3296 PF00672 HAMP domain BF25_3296 PF00989 PAS fold BF25_3296 PF18698 Histidine kinase sensor domain BF25_3296 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_3297 PF00486 Transcriptional regulatory protein, C terminal BF25_3297 PF00072 Response regulator receiver domain BF25_3298 PF01578 Cytochrome C assembly protein BF25_3299 PF05140 ResB-like family BF25_33 PF08281 Sigma-70, region 4 BF25_33 PF04542 Sigma-70 region 2 BF25_330 PF01048 Phosphorylase superfamily BF25_3300 PF00578 AhpC/TSA family BF25_3301 PF01479 S4 domain BF25_3301 PF00849 RNA pseudouridylate synthase BF25_3302 PF07670 Nucleoside recognition BF25_3303 PF07670 Nucleoside recognition BF25_3304 PF07943 Penicillin-binding protein 5, C-terminal domain BF25_3304 PF00768 D-alanyl-D-alanine carboxypeptidase BF25_3305 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF25_3305 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF25_3308 PF03706 Lysylphosphatidylglycerol synthase TM region BF25_3308 PF09924 Uncharacterised conserved protein (DUF2156) BF25_331 PF00291 Pyridoxal-phosphate dependent enzyme BF25_3311 PF01048 Phosphorylase superfamily BF25_3312 PF00989 PAS fold BF25_3312 PF16736 Single Cache-like BF25_3312 PF00512 His Kinase A (phospho-acceptor) domain BF25_3312 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_3313 PF00589 Phage integrase family BF25_3315 PF01904 Protein of unknown function DUF72 BF25_3316 PF00512 His Kinase A (phospho-acceptor) domain BF25_3316 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_3316 PF00989 PAS fold BF25_3319 PF00912 Transglycosylase BF25_3319 PF00905 Penicillin binding protein transpeptidase domain BF25_332 PF01053 Cys/Met metabolism PLP-dependent enzyme BF25_3320 PF01865 Protein of unknown function DUF47 BF25_3321 PF01384 Phosphate transporter family BF25_3322 PF01925 Sulfite exporter TauE/SafE BF25_3325 PF00175 Oxidoreductase NAD-binding domain BF25_3325 PF00042 Globin BF25_3325 PF00970 Oxidoreductase FAD-binding domain BF25_333 PF00465 Iron-containing alcohol dehydrogenase BF25_333 PF00171 Aldehyde dehydrogenase family BF25_3330 PF08241 Methyltransferase domain BF25_3332 PF05525 Branched-chain amino acid transport protein BF25_3334 PF00072 Response regulator receiver domain BF25_3334 PF00196 Bacterial regulatory proteins, luxR family BF25_3335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_3335 PF07730 Histidine kinase BF25_3335 PF00672 HAMP domain BF25_3336 PF09922 Cell wall-active antibiotics response 4TMS YvqF BF25_3339 PF03553 Na+/H+ antiporter family BF25_334 PF14143 YrhC-like protein BF25_3341 PF00375 Sodium:dicarboxylate symporter family BF25_3343 PF00209 Sodium:neurotransmitter symporter family BF25_3345 PF01903 CbiX BF25_3346 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF25_3348 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BF25_3348 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BF25_335 PF01497 Periplasmic binding protein BF25_3350 PF14306 PUA-like domain BF25_3350 PF01747 ATP-sulfurylase BF25_3351 PF01507 Phosphoadenosine phosphosulfate reductase family BF25_3353 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BF25_3353 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BF25_3355 PF00884 Sulfatase BF25_3356 PF01066 CDP-alcohol phosphatidyltransferase BF25_3357 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF25_3357 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF25_3359 PF02811 PHP domain BF25_336 PF01032 FecCD transport family BF25_3360 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BF25_3361 PF01502 Phosphoribosyl-AMP cyclohydrolase BF25_3362 PF00977 Histidine biosynthesis protein BF25_3363 PF00977 Histidine biosynthesis protein BF25_3364 PF00117 Glutamine amidotransferase class-I BF25_3365 PF00475 Imidazoleglycerol-phosphate dehydratase BF25_3366 PF00815 Histidinol dehydrogenase BF25_3367 PF01634 ATP phosphoribosyltransferase BF25_3368 PF13393 Histidyl-tRNA synthetase BF25_3369 PF00694 Aconitase C-terminal domain BF25_337 PF00005 ABC transporter BF25_3370 PF00330 Aconitase family (aconitate hydratase) BF25_3371 PF00180 Isocitrate/isopropylmalate dehydrogenase BF25_3372 PF08502 LeuA allosteric (dimerisation) domain BF25_3372 PF00682 HMGL-like BF25_3373 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BF25_3373 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BF25_3374 PF10369 Small subunit of acetolactate synthase BF25_3374 PF01842 ACT domain BF25_3375 PF00205 Thiamine pyrophosphate enzyme, central domain BF25_3375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF25_3375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF25_3376 PF01063 Amino-transferase class IV BF25_3379 PF03698 Uncharacterised protein family (UPF0180) BF25_3381 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BF25_3383 PF02386 Cation transport protein BF25_3384 PF00375 Sodium:dicarboxylate symporter family BF25_3386 PF01047 MarR family BF25_3389 PF02673 Bacitracin resistance protein BacA BF25_3390 PF01554 MatE BF25_3394 PF01636 Phosphotransferase enzyme family BF25_3397 PF00258 Flavodoxin BF25_3399 PF07687 Peptidase dimerisation domain BF25_3399 PF01546 Peptidase family M20/M25/M40 BF25_3401 PF00501 AMP-binding enzyme BF25_3401 PF13193 AMP-binding enzyme C-terminal domain BF25_3402 PF03062 MBOAT, membrane-bound O-acyltransferase family BF25_3403 PF00550 Phosphopantetheine attachment site BF25_3404 PF04914 DltD protein BF25_3405 PF03060 Nitronate monooxygenase BF25_3406 PF17676 LD-carboxypeptidase C-terminal domain BF25_3406 PF02016 LD-carboxypeptidase N-terminal domain BF25_3408 PF00857 Isochorismatase family BF25_3410 PF01037 Lrp/AsnC ligand binding domain BF25_3414 PF00005 ABC transporter BF25_3416 PF00005 ABC transporter BF25_3417 PF00392 Bacterial regulatory proteins, gntR family BF25_3418 PF00268 Ribonucleotide reductase, small chain BF25_3419 PF00317 Ribonucleotide reductase, all-alpha domain BF25_3419 PF08343 Ribonucleotide reductase N-terminal BF25_3419 PF02867 Ribonucleotide reductase, barrel domain BF25_3421 PF08343 Ribonucleotide reductase N-terminal BF25_3421 PF00317 Ribonucleotide reductase, all-alpha domain BF25_3421 PF02867 Ribonucleotide reductase, barrel domain BF25_3422 PF07972 NrdI Flavodoxin like BF25_3428 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BF25_3429 PF14489 QueF-like protein BF25_343 PF07681 DoxX BF25_3430 PF04055 Radical SAM superfamily BF25_3431 PF01242 6-pyruvoyl tetrahydropterin synthase BF25_3432 PF06508 Queuosine biosynthesis protein QueC BF25_3433 PF00989 PAS fold BF25_3433 PF00512 His Kinase A (phospho-acceptor) domain BF25_3433 PF13188 PAS domain BF25_3433 PF13426 PAS domain BF25_3433 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_3435 PF12867 DinB superfamily BF25_3437 PF01047 MarR family BF25_3438 PF00512 His Kinase A (phospho-acceptor) domain BF25_3438 PF02743 Cache domain BF25_3438 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_3439 PF09388 Spo0E like sporulation regulatory protein BF25_344 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_3440 PF04748 Divergent polysaccharide deacetylase BF25_3442 PF00596 Class II Aldolase and Adducin N-terminal domain BF25_3443 PF00596 Class II Aldolase and Adducin N-terminal domain BF25_3444 PF00395 S-layer homology domain BF25_3444 PF01520 N-acetylmuramoyl-L-alanine amidase BF25_3448 PF08220 DeoR-like helix-turn-helix domain BF25_3448 PF00455 DeoR C terminal sensor domain BF25_345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_3450 PF00266 Aminotransferase class-V BF25_3451 PF13419 Haloacid dehalogenase-like hydrolase BF25_3452 PF00528 Binding-protein-dependent transport system inner membrane component BF25_3454 PF00005 ABC transporter BF25_3455 PF08402 TOBE domain BF25_3455 PF00005 ABC transporter BF25_3460 PF02386 Cation transport protein BF25_3462 PF00561 alpha/beta hydrolase fold BF25_3467 PF01575 MaoC like domain BF25_3468 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF25_3469 PF02386 Cation transport protein BF25_347 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BF25_3470 PF03741 Integral membrane protein TerC family BF25_3471 PF01226 Formate/nitrite transporter BF25_3473 PF06750 Bacterial Peptidase A24 N-terminal domain BF25_3473 PF01478 Type IV leader peptidase family BF25_3474 PF02589 LUD domain BF25_3475 PF02589 LUD domain BF25_3475 PF13183 4Fe-4S dicluster domain BF25_3475 PF11870 Domain of unknown function (DUF3390) BF25_3476 PF02754 Cysteine-rich domain BF25_3477 PF07729 FCD domain BF25_3477 PF00392 Bacterial regulatory proteins, gntR family BF25_3478 PF00672 HAMP domain BF25_3478 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_3478 PF18698 Histidine kinase sensor domain BF25_3478 PF00512 His Kinase A (phospho-acceptor) domain BF25_3478 PF00989 PAS fold BF25_3479 PF00486 Transcriptional regulatory protein, C terminal BF25_3479 PF00072 Response regulator receiver domain BF25_348 PF00082 Subtilase family BF25_348 PF02225 PA domain BF25_348 PF05922 Peptidase inhibitor I9 BF25_348 PF13860 FlgD Ig-like domain BF25_3481 PF13556 PucR C-terminal helix-turn-helix domain BF25_3481 PF05651 Putative sugar diacid recognition BF25_3481 PF17853 GGDEF-like domain BF25_3482 PF01565 FAD binding domain BF25_3482 PF02913 FAD linked oxidases, C-terminal domain BF25_3483 PF02754 Cysteine-rich domain BF25_3483 PF13183 4Fe-4S dicluster domain BF25_3484 PF00188 Cysteine-rich secretory protein family BF25_3486 PF01479 S4 domain BF25_3486 PF00849 RNA pseudouridylate synthase BF25_3488 PF03176 MMPL family BF25_3490 PF13416 Bacterial extracellular solute-binding protein BF25_3491 PF00528 Binding-protein-dependent transport system inner membrane component BF25_3492 PF00528 Binding-protein-dependent transport system inner membrane component BF25_3493 PF08402 TOBE domain BF25_3493 PF00005 ABC transporter BF25_3494 PF00171 Aldehyde dehydrogenase family BF25_3495 PF05547 Immune inhibitor A peptidase M6 BF25_3496 PF08671 Anti-repressor SinI BF25_3496 PF01381 Helix-turn-helix BF25_3497 PF12389 Camelysin metallo-endopeptidase BF25_3499 PF12389 Camelysin metallo-endopeptidase BF25_35 PF00579 tRNA synthetases class I (W and Y) BF25_35 PF01479 S4 domain BF25_3501 PF00768 D-alanyl-D-alanine carboxypeptidase BF25_3501 PF07943 Penicillin-binding protein 5, C-terminal domain BF25_3503 PF13649 Methyltransferase domain BF25_3514 PF01381 Helix-turn-helix BF25_3515 PF00676 Dehydrogenase E1 component BF25_3515 PF16870 2-oxoglutarate dehydrogenase C-terminal BF25_3515 PF02779 Transketolase, pyrimidine binding domain BF25_3516 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF25_3516 PF02817 e3 binding domain BF25_3516 PF00364 Biotin-requiring enzyme BF25_3522 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_3522 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF25_3526 PF10042 Uncharacterized conserved protein (DUF2278) BF25_3527 PF02652 L-lactate permease BF25_3529 PF00290 Tryptophan synthase alpha chain BF25_3530 PF00291 Pyridoxal-phosphate dependent enzyme BF25_3531 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BF25_3532 PF00218 Indole-3-glycerol phosphate synthase BF25_3533 PF02885 Glycosyl transferase family, helical bundle domain BF25_3533 PF00591 Glycosyl transferase family, a/b domain BF25_3534 PF00117 Glutamine amidotransferase class-I BF25_3534 PF02885 Glycosyl transferase family, helical bundle domain BF25_3534 PF00591 Glycosyl transferase family, a/b domain BF25_3536 PF00474 Sodium:solute symporter family BF25_3537 PF02368 Bacterial Ig-like domain (group 2) BF25_3540 PF00756 Putative esterase BF25_3542 PF13673 Acetyltransferase (GNAT) domain BF25_3543 PF13361 UvrD-like helicase C-terminal domain BF25_3543 PF00580 UvrD/REP helicase N-terminal domain BF25_3546 PF07098 Protein of unknown function (DUF1360) BF25_355 PF00561 alpha/beta hydrolase fold BF25_355 PF08386 TAP-like protein BF25_3550 PF04321 RmlD substrate binding domain BF25_3551 PF16363 GDP-mannose 4,6 dehydratase BF25_3552 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BF25_3553 PF00483 Nucleotidyl transferase BF25_3557 PF13181 Tetratricopeptide repeat BF25_3557 PF00535 Glycosyl transferase family 2 BF25_3559 PF05711 Macrocin-O-methyltransferase (TylF) BF25_3560 PF08241 Methyltransferase domain BF25_3561 PF00535 Glycosyl transferase family 2 BF25_3562 PF01098 Cell cycle protein BF25_3563 PF01098 Cell cycle protein BF25_3564 PF00149 Calcineurin-like phosphoesterase BF25_3567 PF00849 RNA pseudouridylate synthase BF25_3568 PF01513 ATP-NAD kinase BF25_3569 PF04607 Region found in RelA / SpoT proteins BF25_357 PF00245 Alkaline phosphatase BF25_3571 PF01928 CYTH domain BF25_3572 PF01152 Bacterial-like globin BF25_3575 PF08439 Oligopeptidase F BF25_3575 PF01432 Peptidase family M3 BF25_3577 PF13396 Phospholipase_D-nuclease N-terminal BF25_3577 PF13091 PLD-like domain BF25_3578 PF05389 Negative regulator of genetic competence (MecA) BF25_3579 PF03741 Integral membrane protein TerC family BF25_3580 PF03960 ArsC family BF25_3582 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_3583 PF01554 MatE BF25_3584 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF25_3584 PF00005 ABC transporter BF25_3585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF25_3585 PF00005 ABC transporter BF25_3586 PF12911 N-terminal TM domain of oligopeptide transport permease C BF25_3586 PF00528 Binding-protein-dependent transport system inner membrane component BF25_3587 PF00528 Binding-protein-dependent transport system inner membrane component BF25_3588 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_359 PF04607 Region found in RelA / SpoT proteins BF25_3590 PF00579 tRNA synthetases class I (W and Y) BF25_3591 PF12227 Protein of unknown function (DUF3603) BF25_3592 PF10026 Predicted Zn-dependent protease (DUF2268) BF25_3593 PF00109 Beta-ketoacyl synthase, N-terminal domain BF25_3593 PF02801 Beta-ketoacyl synthase, C-terminal domain BF25_3594 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF25_3594 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF25_3595 PF10815 ComZ BF25_3599 PF17871 AAA lid domain BF25_3599 PF10431 C-terminal, D2-small domain, of ClpB protein BF25_3599 PF02861 Clp amino terminal domain, pathogenicity island component BF25_3599 PF07724 AAA domain (Cdc48 subfamily) BF25_3599 PF00004 ATPase family associated with various cellular activities (AAA) BF25_360 PF00881 Nitroreductase family BF25_3600 PF14168 YjzC-like protein BF25_3603 PF12758 Protein of unknown function (DUF3813) BF25_3604 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF25_3604 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF25_3606 PF00639 PPIC-type PPIASE domain BF25_3608 PF13509 S1 domain BF25_3608 PF17783 CvfB-like winged helix domain BF25_3609 PF04461 Protein of unknown function (DUF520) BF25_361 PF00471 Ribosomal protein L33 BF25_3611 PF00128 Alpha amylase, catalytic domain BF25_3614 PF06628 Catalase-related immune-responsive BF25_3614 PF00199 Catalase BF25_3616 PF00733 Asparagine synthase BF25_3616 PF13537 Glutamine amidotransferase domain BF25_3618 PF07457 Protein of unknown function (DUF1516) BF25_3619 PF00202 Aminotransferase class-III BF25_362 PF16244 Domain of unknown function (DUF4901) BF25_3621 PF01557 Fumarylacetoacetate (FAA) hydrolase family BF25_3622 PF10676 Spore germination protein gerPA/gerPF BF25_3623 PF10803 Spore germination GerPB BF25_3624 PF10737 Spore germination protein GerPC BF25_3626 PF10970 Spore germination protein GerPE BF25_3627 PF10676 Spore germination protein gerPA/gerPF BF25_3629 PF13361 UvrD-like helicase C-terminal domain BF25_3629 PF00580 UvrD/REP helicase N-terminal domain BF25_3629 PF12705 PD-(D/E)XK nuclease superfamily BF25_3630 PF13361 UvrD-like helicase C-terminal domain BF25_3630 PF12705 PD-(D/E)XK nuclease superfamily BF25_3631 PF10502 Signal peptidase, peptidase S26 BF25_3632 PF09335 SNARE associated Golgi protein BF25_3633 PF06338 ComK protein BF25_3636 PF00313 'Cold-shock' DNA-binding domain BF25_3638 PF00463 Isocitrate lyase family BF25_3639 PF01274 Malate synthase BF25_3640 PF00395 S-layer homology domain BF25_3642 PF00395 S-layer homology domain BF25_3642 PF00150 Cellulase (glycosyl hydrolase family 5) BF25_3642 PF03424 Carbohydrate binding domain (family 17/28) BF25_3643 PF00892 EamA-like transporter family BF25_3644 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF25_3644 PF00672 HAMP domain BF25_3644 PF02743 Cache domain BF25_3645 PF16491 CAAX prenyl protease N-terminal, five membrane helices BF25_3645 PF01435 Peptidase family M48 BF25_365 PF04545 Sigma-70, region 4 BF25_365 PF04542 Sigma-70 region 2 BF25_3650 PF00072 Response regulator receiver domain BF25_3650 PF00486 Transcriptional regulatory protein, C terminal BF25_3651 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_3651 PF00512 His Kinase A (phospho-acceptor) domain BF25_3654 PF06445 GyrI-like small molecule binding domain BF25_3654 PF12833 Helix-turn-helix domain BF25_3655 PF08281 Sigma-70, region 4 BF25_3655 PF04542 Sigma-70 region 2 BF25_3657 PF01966 HD domain BF25_3658 PF00149 Calcineurin-like phosphoesterase BF25_366 PF02666 Phosphatidylserine decarboxylase BF25_3660 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BF25_3665 PF05593 RHS Repeat BF25_3668 PF05593 RHS Repeat BF25_3669 PF01520 N-acetylmuramoyl-L-alanine amidase BF25_3669 PF00395 S-layer homology domain BF25_3671 PF00501 AMP-binding enzyme BF25_3671 PF13193 AMP-binding enzyme C-terminal domain BF25_3673 PF10437 Bacterial lipoate protein ligase C-terminus BF25_3673 PF03099 Biotin/lipoate A/B protein ligase family BF25_3674 PF12706 Beta-lactamase superfamily domain BF25_3675 PF14149 YhfH-like protein BF25_3676 PF00356 Bacterial regulatory proteins, lacI family BF25_3682 PF17932 Tetracyclin repressor-like, C-terminal domain BF25_3682 PF00440 Bacterial regulatory proteins, tetR family BF25_3684 PF03965 Penicillinase repressor BF25_369 PF01926 50S ribosome-binding GTPase BF25_3691 PF01208 Uroporphyrinogen decarboxylase (URO-D) BF25_3692 PF00912 Transglycosylase BF25_3692 PF00905 Penicillin binding protein transpeptidase domain BF25_3693 PF03992 Antibiotic biosynthesis monooxygenase BF25_3694 PF03703 Bacterial PH domain BF25_3695 PF03703 Bacterial PH domain BF25_370 PF08501 Shikimate dehydrogenase substrate binding domain BF25_370 PF01488 Shikimate / quinate 5-dehydrogenase BF25_370 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BF25_3704 PF03703 Bacterial PH domain BF25_3706 PF03703 Bacterial PH domain BF25_3708 PF17934 Tetracyclin repressor-like, C-terminal domain BF25_3708 PF00440 Bacterial regulatory proteins, tetR family BF25_371 PF01985 CRS1 / YhbY (CRM) domain BF25_3710 PF12787 EcsC protein family BF25_3711 PF05975 Bacterial ABC transporter protein EcsB BF25_3712 PF00005 ABC transporter BF25_3713 PF01230 HIT domain BF25_3714 PF12732 YtxH-like protein BF25_3715 PF01047 MarR family BF25_3719 PF13538 UvrD-like helicase C-terminal domain BF25_372 PF01467 Cytidylyltransferase-like BF25_3721 PF07690 Major Facilitator Superfamily BF25_3722 PF07690 Major Facilitator Superfamily BF25_3727 PF04542 Sigma-70 region 2 BF25_3727 PF08281 Sigma-70, region 4 BF25_373 PF01966 HD domain BF25_3730 PF01266 FAD dependent oxidoreductase BF25_3730 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BF25_3731 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF25_3731 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF25_3732 PF00230 Major intrinsic protein BF25_3733 PF04309 Glycerol-3-phosphate responsive antiterminator BF25_3737 PF00561 alpha/beta hydrolase fold BF25_3737 PF08386 TAP-like protein BF25_3739 PF18801 response regulator aspartate phosphatase H, N terminal BF25_3740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_3741 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_3742 PF07690 Major Facilitator Superfamily BF25_3743 PF00440 Bacterial regulatory proteins, tetR family BF25_3744 PF01966 HD domain BF25_3744 PF01336 OB-fold nucleic acid binding domain BF25_3746 PF01385 Probable transposase BF25_3746 PF07282 Putative transposase DNA-binding domain BF25_3746 PF12323 Helix-turn-helix domain BF25_3747 PF13514 AAA domain BF25_3748 PF00149 Calcineurin-like phosphoesterase BF25_375 PF13649 Methyltransferase domain BF25_3751 PF11121 Protein of unknown function (DUF2639) BF25_3752 PF00107 Zinc-binding dehydrogenase BF25_3752 PF08240 Alcohol dehydrogenase GroES-like domain BF25_3754 PF01906 Putative heavy-metal-binding BF25_3759 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF25_3759 PF01627 Hpt domain BF25_3759 PF00512 His Kinase A (phospho-acceptor) domain BF25_3759 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_3759 PF00072 Response regulator receiver domain BF25_376 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF25_376 PF03807 NADP oxidoreductase coenzyme F420-dependent BF25_3760 PF03705 CheR methyltransferase, all-alpha domain BF25_3760 PF01739 CheR methyltransferase, SAM binding domain BF25_3761 PF13426 PAS domain BF25_3761 PF07228 Stage II sporulation protein E (SpoIIE) BF25_3763 PF04545 Sigma-70, region 4 BF25_3763 PF04539 Sigma-70 region 3 BF25_3763 PF04542 Sigma-70 region 2 BF25_3764 PF13581 Histidine kinase-like ATPase domain BF25_3765 PF01740 STAS domain BF25_3768 PF05532 CsbD-like BF25_3769 PF11181 Heat induced stress protein YflT BF25_377 PF10531 SLBB domain BF25_3773 PF00395 S-layer homology domain BF25_3778 PF00672 HAMP domain BF25_3778 PF01966 HD domain BF25_378 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF25_3783 PF02082 Transcriptional regulator BF25_3784 PF02525 Flavodoxin-like fold BF25_3785 PF02733 Dak1 domain BF25_3787 PF02733 Dak1 domain BF25_379 PF13567 Domain of unknown function (DUF4131) BF25_379 PF00753 Metallo-beta-lactamase superfamily BF25_379 PF03772 Competence protein BF25_3791 PF01066 CDP-alcohol phosphatidyltransferase BF25_3795 PF00440 Bacterial regulatory proteins, tetR family BF25_3795 PF18665 Tetracyclin repressor-like, C-terminal domain BF25_3796 PF00550 Phosphopantetheine attachment site BF25_3796 PF07993 Male sterility protein BF25_38 PF00163 Ribosomal protein S4/S9 N-terminal domain BF25_38 PF01479 S4 domain BF25_380 PF14141 YqzM-like protein BF25_3806 PF07690 Major Facilitator Superfamily BF25_3809 PF01925 Sulfite exporter TauE/SafE BF25_381 PF06144 DNA polymerase III, delta subunit BF25_3814 PF03796 DnaB-like helicase C terminal domain BF25_3814 PF00772 DnaB-like helicase N terminal domain BF25_3817 PF13411 MerR HTH family regulatory protein BF25_3817 PF06445 GyrI-like small molecule binding domain BF25_382 PF01649 Ribosomal protein S20 BF25_3821 PF02342 TerD domain BF25_3822 PF03401 Tripartite tricarboxylate transporter family receptor BF25_3823 PF00072 Response regulator receiver domain BF25_3823 PF08279 HTH domain BF25_3823 PF12431 Transcriptional regulator BF25_3824 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_3824 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF25_3825 PF00083 Sugar (and other) transporter BF25_383 PF03418 Germination protease BF25_3831 PF00005 ABC transporter BF25_3831 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF25_3832 PF00005 ABC transporter BF25_3832 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF25_3833 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF25_3833 PF00005 ABC transporter BF25_3834 PF00528 Binding-protein-dependent transport system inner membrane component BF25_3834 PF12911 N-terminal TM domain of oligopeptide transport permease C BF25_3835 PF00528 Binding-protein-dependent transport system inner membrane component BF25_3836 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_3840 PF18593 CdiI immunity protein BF25_3841 PF02423 Ornithine cyclodeaminase/mu-crystallin family BF25_3842 PF05544 Proline racemase BF25_3843 PF11121 Protein of unknown function (DUF2639) BF25_3845 PF01520 N-acetylmuramoyl-L-alanine amidase BF25_3845 PF00395 S-layer homology domain BF25_3846 PF05343 M42 glutamyl aminopeptidase BF25_3849 PF00378 Enoyl-CoA hydratase/isomerase BF25_385 PF03144 Elongation factor Tu domain 2 BF25_385 PF00009 Elongation factor Tu GTP binding domain BF25_385 PF06421 GTP-binding protein LepA C-terminus BF25_385 PF00679 Elongation factor G C-terminus BF25_3852 PF03062 MBOAT, membrane-bound O-acyltransferase family BF25_3853 PF03062 MBOAT, membrane-bound O-acyltransferase family BF25_3855 PF00395 S-layer homology domain BF25_3856 PF02368 Bacterial Ig-like domain (group 2) BF25_3856 PF13205 Bacterial Ig-like domain BF25_3856 PF00395 S-layer homology domain BF25_3858 PF14667 Polysaccharide biosynthesis C-terminal domain BF25_3858 PF01943 Polysaccharide biosynthesis protein BF25_3859 PF07517 SecA DEAD-like domain BF25_3859 PF01043 SecA preprotein cross-linking domain BF25_3859 PF07516 SecA Wing and Scaffold domain BF25_386 PF01638 HxlR-like helix-turn-helix BF25_3863 PF00916 Sulfate permease family BF25_3863 PF01740 STAS domain BF25_3865 PF13193 AMP-binding enzyme C-terminal domain BF25_3865 PF00501 AMP-binding enzyme BF25_3866 PF04055 Radical SAM superfamily BF25_3868 PF01510 N-acetylmuramoyl-L-alanine amidase BF25_3868 PF01476 LysM domain BF25_3868 PF01471 Putative peptidoglycan binding domain BF25_387 PF04055 Radical SAM superfamily BF25_387 PF06969 HemN C-terminal domain BF25_3871 PF02245 Methylpurine-DNA glycosylase (MPG) BF25_3873 PF03306 Alpha-acetolactate decarboxylase BF25_3874 PF00205 Thiamine pyrophosphate enzyme, central domain BF25_3874 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF25_3874 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF25_3877 PF06133 Control of competence regulator ComK, YlbF/YmcA BF25_3878 PF04286 Protein of unknown function (DUF445) BF25_388 PF01628 HrcA protein C terminal domain BF25_3880 PF14398 YheC/D like ATP-grasp BF25_3882 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF25_3883 PF00005 ABC transporter BF25_3884 PF00528 Binding-protein-dependent transport system inner membrane component BF25_3885 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF25_3886 PF00664 ABC transporter transmembrane region BF25_3886 PF00005 ABC transporter BF25_3887 PF00005 ABC transporter BF25_3887 PF00664 ABC transporter transmembrane region BF25_3888 PF00664 ABC transporter transmembrane region BF25_3888 PF00005 ABC transporter BF25_3889 PF00171 Aldehyde dehydrogenase family BF25_389 PF01025 GrpE BF25_3891 PF01177 Asp/Glu/Hydantoin racemase BF25_3892 PF13520 Amino acid permease BF25_3894 PF06628 Catalase-related immune-responsive BF25_3894 PF00199 Catalase BF25_3894 PF18011 C-terminal domain found in long catalases BF25_3895 PF01965 DJ-1/PfpI family BF25_3897 PF07690 Major Facilitator Superfamily BF25_3898 PF12793 Sugar transport-related sRNA regulator N-term BF25_3898 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_3899 PF02525 Flavodoxin-like fold BF25_39 PF01053 Cys/Met metabolism PLP-dependent enzyme BF25_390 PF00012 Hsp70 protein BF25_3901 PF01638 HxlR-like helix-turn-helix BF25_3902 PF07690 Major Facilitator Superfamily BF25_3903 PF17934 Tetracyclin repressor-like, C-terminal domain BF25_3903 PF00440 Bacterial regulatory proteins, tetR family BF25_3904 PF00893 Small Multidrug Resistance protein BF25_3905 PF00893 Small Multidrug Resistance protein BF25_3907 PF01037 Lrp/AsnC ligand binding domain BF25_3908 PF00892 EamA-like transporter family BF25_391 PF00684 DnaJ central domain BF25_391 PF01556 DnaJ C terminal domain BF25_391 PF00226 DnaJ domain BF25_3911 PF07681 DoxX BF25_3913 PF00367 phosphotransferase system, EIIB BF25_3913 PF02378 Phosphotransferase system, EIIC BF25_3914 PF01380 SIS domain BF25_3915 PF01380 SIS domain BF25_3915 PF01418 Helix-turn-helix domain, rpiR family BF25_3917 PF00999 Sodium/hydrogen exchanger family BF25_3918 PF13520 Amino acid permease BF25_3924 PF09335 SNARE associated Golgi protein BF25_3926 PF02735 Ku70/Ku80 beta-barrel domain BF25_3929 PF11007 Spore coat associated protein JA (CotJA) BF25_393 PF04452 RNA methyltransferase BF25_3930 PF12652 CotJB protein BF25_3931 PF05067 Manganese containing catalase BF25_3932 PF05525 Branched-chain amino acid transport protein BF25_3935 PF09529 Integral membrane protein (intg_mem_TP0381) BF25_3937 PF00005 ABC transporter BF25_3938 PF12704 MacB-like periplasmic core domain BF25_3938 PF02687 FtsX-like permease family BF25_3939 PF06725 3D domain BF25_3939 PF01476 LysM domain BF25_394 PF04055 Radical SAM superfamily BF25_394 PF01938 TRAM domain BF25_394 PF00919 Uncharacterized protein family UPF0004 BF25_3942 PF02378 Phosphotransferase system, EIIC BF25_3943 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF25_3944 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF25_3945 PF08279 HTH domain BF25_3945 PF05043 Mga helix-turn-helix domain BF25_3945 PF00874 PRD domain BF25_3945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF25_3947 PF07690 Major Facilitator Superfamily BF25_3948 PF02690 Na+/Pi-cotransporter BF25_3949 PF00107 Zinc-binding dehydrogenase BF25_3949 PF08240 Alcohol dehydrogenase GroES-like domain BF25_395 PF01165 Ribosomal protein S21 BF25_3950 PF03816 Cell envelope-related transcriptional attenuator domain BF25_3952 PF01925 Sulfite exporter TauE/SafE BF25_3953 PF13686 DsrE/DsrF/DrsH-like family BF25_3955 PF00581 Rhodanese-like domain BF25_3957 PF01206 Sulfurtransferase TusA BF25_3958 PF00753 Metallo-beta-lactamase superfamily BF25_3958 PF00581 Rhodanese-like domain BF25_3959 PF00581 Rhodanese-like domain BF25_3959 PF01206 Sulfurtransferase TusA BF25_396 PF09424 Yqey-like protein BF25_3960 PF02583 Metal-sensitive transcriptional repressor BF25_3961 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF25_3961 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_3966 PF04293 SpoVR like protein BF25_3967 PF00881 Nitroreductase family BF25_397 PF07873 YabP family BF25_3970 PF03323 Bacillus/Clostridium GerA spore germination protein BF25_3972 PF03845 Spore germination protein BF25_3974 PF14148 YhdB-like protein BF25_3975 PF02600 Disulfide bond formation protein DsbB BF25_3976 PF00085 Thioredoxin BF25_3978 PF00356 Bacterial regulatory proteins, lacI family BF25_3978 PF13407 Periplasmic binding protein domain BF25_3979 PF00367 phosphotransferase system, EIIB BF25_3979 PF02378 Phosphotransferase system, EIIC BF25_398 PF06898 Putative stage IV sporulation protein YqfD BF25_3980 PF08244 Glycosyl hydrolases family 32 C terminal BF25_3980 PF00251 Glycosyl hydrolases family 32 N-terminal domain BF25_3981 PF00294 pfkB family carbohydrate kinase BF25_3986 PF00860 Permease family BF25_3989 PF01047 MarR family BF25_399 PF02562 PhoH-like protein BF25_3990 PF07690 Major Facilitator Superfamily BF25_3991 PF02702 Osmosensitive K+ channel His kinase sensor domain BF25_3992 PF02669 K+-transporting ATPase, c chain BF25_3994 PF03814 Potassium-transporting ATPase A subunit BF25_3998 PF08543 Phosphomethylpyrimidine kinase BF25_3999 PF00899 ThiF family BF25_4 PF14794 Domain of unknown function (DUF4479) BF25_4 PF01588 Putative tRNA binding domain BF25_40 PF13185 GAF domain BF25_400 PF07698 7TM receptor with intracellular HD hydrolase BF25_400 PF07697 7TM-HD extracellular BF25_400 PF01966 HD domain BF25_4000 PF05690 Thiazole biosynthesis protein ThiG BF25_4001 PF02597 ThiS family BF25_4002 PF01266 FAD dependent oxidoreductase BF25_4003 PF02581 Thiamine monophosphate synthase BF25_4004 PF09084 NMT1/THI5 like BF25_4005 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4006 PF00005 ABC transporter BF25_4007 PF03070 TENA/THI-4/PQQC family BF25_4008 PF00246 Zinc carboxypeptidase BF25_4008 PF08239 Bacterial SH3 domain BF25_401 PF02130 Uncharacterized protein family UPF0054 BF25_4011 PF00571 CBS domain BF25_402 PF01219 Prokaryotic diacylglycerol kinase BF25_403 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF25_4036 PF00873 AcrB/AcrD/AcrF family BF25_4038 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4039 PF00528 Binding-protein-dependent transport system inner membrane component BF25_404 PF07650 KH domain BF25_404 PF01926 50S ribosome-binding GTPase BF25_4040 PF12849 PBP superfamily domain BF25_4041 PF07664 Ferrous iron transport protein B C terminus BF25_4041 PF04023 FeoA domain BF25_4041 PF17910 FeoB cytosolic helical domain BF25_4041 PF02421 Ferrous iron transport protein B BF25_4041 PF07670 Nucleoside recognition BF25_4042 PF17910 FeoB cytosolic helical domain BF25_4042 PF02421 Ferrous iron transport protein B BF25_4042 PF07670 Nucleoside recognition BF25_4042 PF07664 Ferrous iron transport protein B C terminus BF25_4043 PF07670 Nucleoside recognition BF25_4043 PF17910 FeoB cytosolic helical domain BF25_4043 PF02421 Ferrous iron transport protein B BF25_4043 PF07664 Ferrous iron transport protein B C terminus BF25_4044 PF05504 Spore germination B3/ GerAC like, C-terminal BF25_4045 PF03845 Spore germination protein BF25_4046 PF03323 Bacillus/Clostridium GerA spore germination protein BF25_4047 PF00474 Sodium:solute symporter family BF25_4048 PF11755 Protein of unknown function (DUF3311) BF25_4049 PF07687 Peptidase dimerisation domain BF25_4049 PF01546 Peptidase family M20/M25/M40 BF25_4050 PF13529 Peptidase_C39 like family BF25_4051 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BF25_4052 PF00115 Cytochrome C and Quinol oxidase polypeptide I BF25_4053 PF00510 Cytochrome c oxidase subunit III BF25_4055 PF00999 Sodium/hydrogen exchanger family BF25_4055 PF02080 TrkA-C domain BF25_4055 PF02254 TrkA-N domain BF25_406 PF02565 Recombination protein O C terminal BF25_406 PF11967 Recombination protein O N terminal BF25_4060 PF00860 Permease family BF25_4061 PF00324 Amino acid permease BF25_4064 PF05525 Branched-chain amino acid transport protein BF25_4065 PF00854 POT family BF25_4066 PF04203 Sortase domain BF25_4068 PF01381 Helix-turn-helix BF25_4069 PF01476 LysM domain BF25_4069 PF06725 3D domain BF25_407 PF08279 HTH domain BF25_407 PF00571 CBS domain BF25_4070 PF02743 Cache domain BF25_4070 PF00672 HAMP domain BF25_4070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF25_4071 PF02673 Bacitracin resistance protein BacA BF25_4076 PF03372 Endonuclease/Exonuclease/phosphatase family BF25_4077 PF00882 Zinc dependent phospholipase C BF25_4079 PF00107 Zinc-binding dehydrogenase BF25_4079 PF08240 Alcohol dehydrogenase GroES-like domain BF25_408 PF03618 Kinase/pyrophosphorylase BF25_4082 PF05547 Immune inhibitor A peptidase M6 BF25_4083 PF00923 Transaldolase/Fructose-6-phosphate aldolase BF25_4084 PF13407 Periplasmic binding protein domain BF25_4085 PF02653 Branched-chain amino acid transport system / permease component BF25_4086 PF00005 ABC transporter BF25_4087 PF05025 RbsD / FucU transport protein family BF25_4088 PF00294 pfkB family carbohydrate kinase BF25_4089 PF00356 Bacterial regulatory proteins, lacI family BF25_409 PF01807 CHC2 zinc finger BF25_409 PF08275 DNA primase catalytic core, N-terminal domain BF25_409 PF10410 DnaB-helicase binding domain of primase BF25_4090 PF07690 Major Facilitator Superfamily BF25_4091 PF07690 Major Facilitator Superfamily BF25_4092 PF01047 MarR family BF25_4093 PF07690 Major Facilitator Superfamily BF25_4094 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF25_4094 PF00005 ABC transporter BF25_4095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF25_4095 PF00005 ABC transporter BF25_4096 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4097 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4098 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_41 PF00440 Bacterial regulatory proteins, tetR family BF25_410 PF03979 Sigma-70 factor, region 1.1 BF25_410 PF04545 Sigma-70, region 4 BF25_410 PF04539 Sigma-70 region 3 BF25_410 PF04542 Sigma-70 region 2 BF25_410 PF00140 Sigma-70 factor, region 1.2 BF25_4100 PF00582 Universal stress protein family BF25_4101 PF00916 Sulfate permease family BF25_4101 PF01740 STAS domain BF25_4104 PF00486 Transcriptional regulatory protein, C terminal BF25_4104 PF00072 Response regulator receiver domain BF25_4105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_4105 PF00512 His Kinase A (phospho-acceptor) domain BF25_4105 PF18698 Histidine kinase sensor domain BF25_4105 PF00672 HAMP domain BF25_4105 PF00989 PAS fold BF25_4106 PF01872 RibD C-terminal domain BF25_4107 PF13280 WYL domain BF25_4107 PF08279 HTH domain BF25_411 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BF25_4112 PF00324 Amino acid permease BF25_4113 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4114 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4115 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF25_4116 PF00005 ABC transporter BF25_4117 PF01235 Sodium:alanine symporter family BF25_4118 PF01636 Phosphotransferase enzyme family BF25_412 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BF25_4120 PF03323 Bacillus/Clostridium GerA spore germination protein BF25_4123 PF16657 Maltogenic Amylase, C-terminal domain BF25_4123 PF00128 Alpha amylase, catalytic domain BF25_4124 PF00367 phosphotransferase system, EIIB BF25_4124 PF02378 Phosphotransferase system, EIIC BF25_4125 PF00392 Bacterial regulatory proteins, gntR family BF25_4125 PF07702 UTRA domain BF25_4126 PF13520 Amino acid permease BF25_4127 PF03707 Bacterial signalling protein N terminal repeat BF25_4127 PF00990 Diguanylate cyclase, GGDEF domain BF25_4127 PF00563 EAL domain BF25_413 PF01784 NIF3 (NGG1p interacting factor 3) BF25_4130 PF13396 Phospholipase_D-nuclease N-terminal BF25_4130 PF13091 PLD-like domain BF25_4131 PF07728 AAA domain (dynein-related subfamily) BF25_4132 PF00092 von Willebrand factor type A domain BF25_4133 PF00293 NUDIX domain BF25_4133 PF13344 Haloacid dehalogenase-like hydrolase BF25_4134 PF01370 NAD dependent epimerase/dehydratase family BF25_4135 PF00155 Aminotransferase class I and II BF25_4136 PF08241 Methyltransferase domain BF25_4137 PF00005 ABC transporter BF25_4138 PF01032 FecCD transport family BF25_4139 PF01032 FecCD transport family BF25_414 PF02401 LytB protein BF25_4140 PF01497 Periplasmic binding protein BF25_4141 PF00854 POT family BF25_4142 PF08141 Small acid-soluble spore protein H family BF25_4143 PF01022 Bacterial regulatory protein, arsR family BF25_4144 PF02652 L-lactate permease BF25_4145 PF00206 Lyase BF25_4145 PF10415 Fumarase C C-terminus BF25_4146 PF00571 CBS domain BF25_4146 PF01595 Cyclin M transmembrane N-terminal domain BF25_4146 PF03471 Transporter associated domain BF25_4147 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_4148 PF01773 Na+ dependent nucleoside transporter N-terminus BF25_4148 PF07662 Na+ dependent nucleoside transporter C-terminus BF25_4149 PF03816 Cell envelope-related transcriptional attenuator domain BF25_4150 PF04294 VanW like protein BF25_4154 PF03413 Peptidase propeptide and YPEB domain BF25_4154 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF25_4154 PF01447 Thermolysin metallopeptidase, catalytic domain BF25_4154 PF07504 Fungalysin/Thermolysin Propeptide Motif BF25_4157 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BF25_4157 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BF25_4157 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BF25_4158 PF00403 Heavy-metal-associated domain BF25_4159 PF01022 Bacterial regulatory protein, arsR family BF25_416 PF00270 DEAD/DEAH box helicase BF25_416 PF00271 Helicase conserved C-terminal domain BF25_4160 PF13520 Amino acid permease BF25_4161 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF25_4161 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BF25_4165 PF00384 Molybdopterin oxidoreductase BF25_4165 PF00037 4Fe-4S binding domain BF25_4165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF25_4165 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF25_4165 PF01568 Molydopterin dinucleotide binding domain BF25_4166 PF02634 FdhD/NarQ family BF25_4167 PF00583 Acetyltransferase (GNAT) family BF25_4167 PF13508 Acetyltransferase (GNAT) domain BF25_4169 PF00072 Response regulator receiver domain BF25_4169 PF00486 Transcriptional regulatory protein, C terminal BF25_417 PF01261 Xylose isomerase-like TIM barrel BF25_4170 PF18698 Histidine kinase sensor domain BF25_4170 PF00512 His Kinase A (phospho-acceptor) domain BF25_4170 PF00672 HAMP domain BF25_4170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_4170 PF00989 PAS fold BF25_4172 PF00155 Aminotransferase class I and II BF25_4172 PF00392 Bacterial regulatory proteins, gntR family BF25_4173 PF00892 EamA-like transporter family BF25_4175 PF00390 Malic enzyme, N-terminal domain BF25_4175 PF03949 Malic enzyme, NAD binding domain BF25_4176 PF03390 2-hydroxycarboxylate transporter family BF25_4177 PF00072 Response regulator receiver domain BF25_4178 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF25_4178 PF17203 Single cache domain 3 BF25_4178 PF00989 PAS fold BF25_4178 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_4179 PF02743 Cache domain BF25_4179 PF00672 HAMP domain BF25_4179 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF25_418 PF11116 Protein of unknown function (DUF2624) BF25_4180 PF13529 Peptidase_C39 like family BF25_4182 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_4182 PF00512 His Kinase A (phospho-acceptor) domain BF25_4183 PF00072 Response regulator receiver domain BF25_4183 PF00486 Transcriptional regulatory protein, C terminal BF25_4184 PF00149 Calcineurin-like phosphoesterase BF25_4185 PF13416 Bacterial extracellular solute-binding protein BF25_4186 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4187 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4188 PF00005 ABC transporter BF25_4188 PF17912 MalK OB fold domain BF25_4189 PF04309 Glycerol-3-phosphate responsive antiterminator BF25_419 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF25_419 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF25_4193 PF03600 Citrate transporter BF25_4196 PF17203 Single cache domain 3 BF25_4196 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF25_4196 PF00989 PAS fold BF25_4196 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_4197 PF02743 Cache domain BF25_4197 PF00672 HAMP domain BF25_4197 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF25_4198 PF15975 Flotillin BF25_4198 PF01145 SPFH domain / Band 7 family BF25_42 PF00440 Bacterial regulatory proteins, tetR family BF25_420 PF00005 ABC transporter BF25_4200 PF08453 Peptidase family M9 N-terminal BF25_4200 PF01752 Collagenase BF25_4200 PF18496 Collagenase G catalytic helper subdomain BF25_4201 PF02028 BCCT, betaine/carnitine/choline family transporter BF25_4204 PF04285 Protein of unknown function (DUF444) BF25_4205 PF08298 PrkA AAA domain BF25_4205 PF06798 PrkA serine protein kinase C-terminal domain BF25_4207 PF03707 Bacterial signalling protein N terminal repeat BF25_4207 PF00990 Diguanylate cyclase, GGDEF domain BF25_4207 PF00563 EAL domain BF25_4208 PF00588 SpoU rRNA Methylase family BF25_4209 PF12671 Putative amidase domain BF25_421 PF00950 ABC 3 transport family BF25_4210 PF08331 Domain of unknown function (DUF1730) BF25_4212 PF13462 Thioredoxin BF25_4213 PF00912 Transglycosylase BF25_4213 PF00905 Penicillin binding protein transpeptidase domain BF25_4214 PF13344 Haloacid dehalogenase-like hydrolase BF25_4214 PF00293 NUDIX domain BF25_4215 PF01709 Transcriptional regulator BF25_422 PF01475 Ferric uptake regulator family BF25_423 PF04551 GcpE protein BF25_4237 PF11023 Zinc-ribbon containing domain BF25_4238 PF01475 Ferric uptake regulator family BF25_4239 PF00578 AhpC/TSA family BF25_4240 PF07885 Ion channel BF25_4243 PF00005 ABC transporter BF25_4244 PF00202 Aminotransferase class-III BF25_4245 PF04898 Glutamate synthase central domain BF25_4245 PF01645 Conserved region in glutamate synthase BF25_4245 PF01493 GXGXG motif BF25_4245 PF00310 Glutamine amidotransferases class-II BF25_4246 PF06081 Aromatic acid exporter family member 1 BF25_4247 PF00005 ABC transporter BF25_4247 PF00664 ABC transporter transmembrane region BF25_4248 PF04167 Protein of unknown function (DUF402) BF25_4249 PF14182 YgaB-like protein BF25_4251 PF00730 HhH-GPD superfamily base excision DNA repair protein BF25_4251 PF14815 NUDIX domain BF25_4252 PF04307 LexA-binding, inner membrane-associated putative hydrolase BF25_4253 PF14043 WVELL protein BF25_4254 PF08176 Small acid-soluble spore protein K family BF25_4257 PF02631 RecX family BF25_4258 PF01370 NAD dependent epimerase/dehydratase family BF25_4258 PF08338 Domain of unknown function (DUF1731) BF25_4259 PF01979 Amidohydrolase family BF25_4262 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BF25_4262 PF04101 Glycosyltransferase family 28 C-terminal domain BF25_4263 PF04055 Radical SAM superfamily BF25_4264 PF02901 Pyruvate formate lyase-like BF25_4264 PF01228 Glycine radical BF25_4265 PF00535 Glycosyl transferase family 2 BF25_4266 PF00551 Formyl transferase BF25_4266 PF02911 Formyl transferase, C-terminal domain BF25_4266 PF01370 NAD dependent epimerase/dehydratase family BF25_4267 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF25_4267 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF25_4267 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF25_4268 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF25_4268 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF25_4268 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF25_4269 PF00535 Glycosyl transferase family 2 BF25_427 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF25_427 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF25_4272 PF00144 Beta-lactamase BF25_4273 PF02378 Phosphotransferase system, EIIC BF25_4273 PF00367 phosphotransferase system, EIIB BF25_4274 PF04960 Glutaminase BF25_4279 PF01546 Peptidase family M20/M25/M40 BF25_4279 PF07687 Peptidase dimerisation domain BF25_428 PF07690 Major Facilitator Superfamily BF25_4280 PF00324 Amino acid permease BF25_4282 PF13426 PAS domain BF25_4282 PF00158 Sigma-54 interaction domain BF25_4282 PF02954 Bacterial regulatory protein, Fis family BF25_4284 PF01416 tRNA pseudouridine synthase BF25_4286 PF01183 Glycosyl hydrolases family 25 BF25_43 PF00892 EamA-like transporter family BF25_430 PF12849 PBP superfamily domain BF25_431 PF00528 Binding-protein-dependent transport system inner membrane component BF25_432 PF00528 Binding-protein-dependent transport system inner membrane component BF25_433 PF00005 ABC transporter BF25_4331 PF01695 IstB-like ATP binding protein BF25_4331 PF07319 Primosomal protein DnaI N-terminus BF25_4338 PF01381 Helix-turn-helix BF25_434 PF01895 PhoU domain BF25_4342 PF00589 Phage integrase family BF25_4342 PF14659 Phage integrase, N-terminal SAM-like domain BF25_4343 PF01938 TRAM domain BF25_4343 PF05958 tRNA (Uracil-5-)-methyltransferase BF25_4344 PF00730 HhH-GPD superfamily base excision DNA repair protein BF25_4346 PF01522 Polysaccharide deacetylase BF25_4347 PF05681 Fumarate hydratase (Fumerase) BF25_4347 PF05683 Fumarase C-terminus BF25_4349 PF08756 YfkB-like domain BF25_4349 PF04055 Radical SAM superfamily BF25_435 PF00483 Nucleotidyl transferase BF25_4350 PF14167 YfkD-like protein BF25_4351 PF01699 Sodium/calcium exchanger protein BF25_4352 PF16242 Pyridoxamine 5'-phosphate oxidase like BF25_4355 PF09335 SNARE associated Golgi protein BF25_4357 PF10502 Signal peptidase, peptidase S26 BF25_4358 PF10502 Signal peptidase, peptidase S26 BF25_436 PF00471 Ribosomal protein L33 BF25_4360 PF00892 EamA-like transporter family BF25_4362 PF03631 Virulence factor BrkB BF25_4364 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF25_4365 PF06569 Protein of unknown function (DUF1128) BF25_4366 PF00690 Cation transporter/ATPase, N-terminus BF25_4366 PF00689 Cation transporting ATPase, C-terminus BF25_4367 PF05816 Toxic anion resistance protein (TelA) BF25_4368 PF14266 Putative component of 'biosynthetic module' BF25_4369 PF03741 Integral membrane protein TerC family BF25_437 PF01812 5-formyltetrahydrofolate cyclo-ligase family BF25_4370 PF02342 TerD domain BF25_4371 PF02342 TerD domain BF25_4372 PF02342 TerD domain BF25_4373 PF00480 ROK family BF25_4375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF25_4375 PF09180 Prolyl-tRNA synthetase, C-terminal BF25_4375 PF03129 Anticodon binding domain BF25_4378 PF11700 Vacuole effluxer Atg22 like BF25_438 PF06014 Bacterial protein of unknown function (DUF910) BF25_4382 PF08360 QacR-like protein, C-terminal region BF25_4382 PF00440 Bacterial regulatory proteins, tetR family BF25_4386 PF00704 Glycosyl hydrolases family 18 BF25_4386 PF00041 Fibronectin type III domain BF25_4387 PF12848 ABC transporter BF25_4387 PF00005 ABC transporter BF25_4388 PF00005 ABC transporter BF25_439 PF00480 ROK family BF25_4390 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4391 PF01910 Thiamine-binding protein BF25_4392 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF25_4392 PF00672 HAMP domain BF25_4393 PF03605 Anaerobic c4-dicarboxylate membrane transporter BF25_4394 PF02581 Thiamine monophosphate synthase BF25_4395 PF02110 Hydroxyethylthiazole kinase family BF25_4396 PF01751 Toprim domain BF25_4396 PF01131 DNA topoisomerase BF25_4397 PF01061 ABC-2 type transporter BF25_4398 PF03372 Endonuclease/Exonuclease/phosphatase family BF25_4399 PF00367 phosphotransferase system, EIIB BF25_4399 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF25_4399 PF02378 Phosphotransferase system, EIIC BF25_44 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF25_44 PF03466 LysR substrate binding domain BF25_440 PF10958 Protein of unknown function (DUF2759) BF25_4400 PF16657 Maltogenic Amylase, C-terminal domain BF25_4400 PF00128 Alpha amylase, catalytic domain BF25_4401 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF25_4401 PF12729 Four helix bundle sensory module for signal transduction BF25_4401 PF00672 HAMP domain BF25_4402 PF12729 Four helix bundle sensory module for signal transduction BF25_4402 PF00672 HAMP domain BF25_4402 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF25_4403 PF00005 ABC transporter BF25_4404 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF25_4405 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4407 PF01266 FAD dependent oxidoreductase BF25_4407 PF00355 Rieske [2Fe-2S] domain BF25_4408 PF07690 Major Facilitator Superfamily BF25_4409 PF10127 RNA repair pathway DNA polymerase beta family BF25_441 PF00753 Metallo-beta-lactamase superfamily BF25_4413 PF00512 His Kinase A (phospho-acceptor) domain BF25_4413 PF13188 PAS domain BF25_4413 PF13426 PAS domain BF25_4413 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_4413 PF00989 PAS fold BF25_4419 PF12728 Helix-turn-helix domain BF25_4421 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_4422 PF01497 Periplasmic binding protein BF25_4423 PF01032 FecCD transport family BF25_4424 PF01032 FecCD transport family BF25_4425 PF00596 Class II Aldolase and Adducin N-terminal domain BF25_4427 PF01636 Phosphotransferase enzyme family BF25_4428 PF00578 AhpC/TSA family BF25_4429 PF13192 Thioredoxin domain BF25_4429 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_443 PF01022 Bacterial regulatory protein, arsR family BF25_4431 PF01546 Peptidase family M20/M25/M40 BF25_4431 PF07687 Peptidase dimerisation domain BF25_4434 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF25_4434 PF13378 Enolase C-terminal domain-like BF25_4437 PF07308 Protein of unknown function (DUF1456) BF25_4439 PF01207 Dihydrouridine synthase (Dus) BF25_4440 PF05958 tRNA (Uracil-5-)-methyltransferase BF25_4440 PF01938 TRAM domain BF25_4440 PF02475 Met-10+ like-protein BF25_4441 PF07670 Nucleoside recognition BF25_4441 PF01773 Na+ dependent nucleoside transporter N-terminus BF25_4441 PF07662 Na+ dependent nucleoside transporter C-terminus BF25_4445 PF02073 Thermophilic metalloprotease (M29) BF25_4446 PF00893 Small Multidrug Resistance protein BF25_4447 PF00171 Aldehyde dehydrogenase family BF25_4448 PF00158 Sigma-54 interaction domain BF25_4449 PF00202 Aminotransferase class-III BF25_445 PF01053 Cys/Met metabolism PLP-dependent enzyme BF25_4450 PF13419 Haloacid dehalogenase-like hydrolase BF25_4451 PF00781 Diacylglycerol kinase catalytic domain BF25_4452 PF02934 GatB/GatE catalytic domain BF25_4452 PF02637 GatB domain BF25_4453 PF01425 Amidase BF25_4454 PF02686 Glu-tRNAGln amidotransferase C subunit BF25_4456 PF01047 MarR family BF25_4457 PF02374 Anion-transporting ATPase BF25_4457 PF17886 HSP20-like domain found in ArsA BF25_4458 PF17886 HSP20-like domain found in ArsA BF25_4458 PF02374 Anion-transporting ATPase BF25_446 PF01053 Cys/Met metabolism PLP-dependent enzyme BF25_4461 PF03180 NLPA lipoprotein BF25_4462 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4463 PF00005 ABC transporter BF25_4463 PF09383 NIL domain BF25_4464 PF00857 Isochorismatase family BF25_4466 PF00171 Aldehyde dehydrogenase family BF25_4467 PF01925 Sulfite exporter TauE/SafE BF25_4468 PF07537 CamS sex pheromone cAM373 precursor BF25_4469 PF03120 NAD-dependent DNA ligase OB-fold domain BF25_4469 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BF25_4469 PF01653 NAD-dependent DNA ligase adenylation domain BF25_4469 PF00533 BRCA1 C Terminus (BRCT) domain BF25_4469 PF12826 Helix-hairpin-helix motif BF25_447 PF02574 Homocysteine S-methyltransferase BF25_447 PF02219 Methylenetetrahydrofolate reductase BF25_4470 PF13361 UvrD-like helicase C-terminal domain BF25_4470 PF00580 UvrD/REP helicase N-terminal domain BF25_4471 PF01884 PcrB family BF25_4475 PF02843 Phosphoribosylglycinamide synthetase, C domain BF25_4475 PF02844 Phosphoribosylglycinamide synthetase, N domain BF25_4475 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BF25_4476 PF01808 AICARFT/IMPCHase bienzyme BF25_4476 PF02142 MGS-like domain BF25_4477 PF00551 Formyl transferase BF25_4478 PF00586 AIR synthase related protein, N-terminal domain BF25_4478 PF02769 AIR synthase related protein, C-terminal domain BF25_4479 PF00156 Phosphoribosyl transferase domain BF25_448 PF02965 Vitamin B12 dependent methionine synthase, activation domain BF25_448 PF02607 B12 binding domain BF25_448 PF00809 Pterin binding enzyme BF25_448 PF02310 B12 binding domain BF25_448 PF02574 Homocysteine S-methyltransferase BF25_4480 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BF25_4480 PF00586 AIR synthase related protein, N-terminal domain BF25_4480 PF02769 AIR synthase related protein, C-terminal domain BF25_4482 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BF25_4483 PF01259 SAICAR synthetase BF25_4484 PF10397 Adenylosuccinate lyase C-terminus BF25_4484 PF00206 Lyase BF25_4485 PF02222 ATP-grasp domain BF25_4485 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BF25_4486 PF00731 AIR carboxylase BF25_449 PF04101 Glycosyltransferase family 28 C-terminal domain BF25_449 PF03033 Glycosyltransferase family 28 N-terminal domain BF25_4491 PF00072 Response regulator receiver domain BF25_4491 PF00486 Transcriptional regulatory protein, C terminal BF25_4492 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_4492 PF00512 His Kinase A (phospho-acceptor) domain BF25_4493 PF00005 ABC transporter BF25_4495 PF02673 Bacitracin resistance protein BacA BF25_4499 PF00535 Glycosyl transferase family 2 BF25_45 PF06160 Septation ring formation regulator, EzrA BF25_4505 PF08241 Methyltransferase domain BF25_4507 PF05045 Rhamnan synthesis protein F BF25_4507 PF14307 Glycosyltransferase WbsX BF25_4514 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_4514 PF00512 His Kinase A (phospho-acceptor) domain BF25_4514 PF00989 PAS fold BF25_4514 PF16736 Single Cache-like BF25_4515 PF00072 Response regulator receiver domain BF25_4515 PF00486 Transcriptional regulatory protein, C terminal BF25_4516 PF00860 Permease family BF25_4517 PF00117 Glutamine amidotransferase class-I BF25_4517 PF00958 GMP synthase C terminal domain BF25_4517 PF02540 NAD synthase BF25_4518 PF00118 TCP-1/cpn60 chaperonin family BF25_4519 PF00166 Chaperonin 10 Kd subunit BF25_4520 PF02517 CPBP intramembrane metalloprotease BF25_4522 PF02629 CoA binding domain BF25_4522 PF06971 Putative DNA-binding protein N-terminus BF25_4523 PF16326 ABC transporter C-terminal domain BF25_4523 PF00005 ABC transporter BF25_4523 PF12848 ABC transporter BF25_4524 PF00814 Glycoprotease family BF25_4525 PF00583 Acetyltransferase (GNAT) family BF25_4526 PF00814 Glycoprotease family BF25_4527 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BF25_4544 PF10263 SprT-like family BF25_4544 PF17283 SprT-like zinc ribbon domain BF25_4545 PF00575 S1 RNA binding domain BF25_4545 PF17674 HHH domain BF25_4545 PF16921 Tex protein YqgF-like domain BF25_4545 PF09371 Tex-like protein N-terminal domain BF25_4546 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BF25_4547 PF01402 Ribbon-helix-helix protein, copG family BF25_4548 PF01168 Alanine racemase, N-terminal domain BF25_4548 PF00842 Alanine racemase, C-terminal domain BF25_4550 PF01648 4'-phosphopantetheinyl transferase superfamily BF25_4551 PF03851 UV-endonuclease UvdE BF25_4552 PF01694 Rhomboid family BF25_4553 PF00271 Helicase conserved C-terminal domain BF25_4553 PF00270 DEAD/DEAH box helicase BF25_4554 PF02875 Mur ligase family, glutamate ligase domain BF25_4554 PF08245 Mur ligase middle domain BF25_4554 PF01225 Mur ligase family, catalytic domain BF25_4555 PF01820 D-ala D-ala ligase N-terminus BF25_4555 PF07478 D-ala D-ala ligase C-terminus BF25_4556 PF01820 D-ala D-ala ligase N-terminus BF25_4556 PF07478 D-ala D-ala ligase C-terminus BF25_4557 PF07690 Major Facilitator Superfamily BF25_4559 PF01557 Fumarylacetoacetate (FAA) hydrolase family BF25_456 PF00375 Sodium:dicarboxylate symporter family BF25_4560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_4564 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF25_4564 PF00005 ABC transporter BF25_4566 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF25_4566 PF00005 ABC transporter BF25_4568 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4569 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_457 PF11117 Protein of unknown function (DUF2626) BF25_4572 PF12848 ABC transporter BF25_4572 PF16326 ABC transporter C-terminal domain BF25_4572 PF00005 ABC transporter BF25_4576 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BF25_4577 PF01026 TatD related DNase BF25_4580 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF25_4580 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF25_4582 PF00356 Bacterial regulatory proteins, lacI family BF25_4582 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF25_4584 PF01553 Acyltransferase BF25_4586 PF14142 YrzO-like protein BF25_4587 PF00892 EamA-like transporter family BF25_4588 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF25_4588 PF03466 LysR substrate binding domain BF25_459 PF00437 Type II/IV secretion system protein BF25_4591 PF12727 PBP superfamily domain BF25_4591 PF12728 Helix-turn-helix domain BF25_4594 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4595 PF06800 Sugar transport protein BF25_4596 PF04973 Nicotinamide mononucleotide transporter BF25_4597 PF03807 NADP oxidoreductase coenzyme F420-dependent BF25_4597 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF25_4598 PF00248 Aldo/keto reductase family BF25_4599 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_46 PF00266 Aminotransferase class-V BF25_460 PF00482 Type II secretion system (T2SS), protein F BF25_4600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_4603 PF12833 Helix-turn-helix domain BF25_4605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF25_4606 PF00005 ABC transporter BF25_4606 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF25_4607 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF25_4607 PF00005 ABC transporter BF25_4608 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4608 PF12911 N-terminal TM domain of oligopeptide transport permease C BF25_4609 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4612 PF07690 Major Facilitator Superfamily BF25_4614 PF07690 Major Facilitator Superfamily BF25_4615 PF01565 FAD binding domain BF25_4618 PF03180 NLPA lipoprotein BF25_4619 PF09383 NIL domain BF25_4619 PF00005 ABC transporter BF25_462 PF07963 Prokaryotic N-terminal methylation motif BF25_4620 PF00528 Binding-protein-dependent transport system inner membrane component BF25_4629 PF07676 WD40-like Beta Propeller Repeat BF25_4629 PF00326 Prolyl oligopeptidase family BF25_4630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF25_4630 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BF25_4631 PF02447 GntP family permease BF25_4632 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF25_4632 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF25_4633 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF25_4633 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF25_4634 PF00392 Bacterial regulatory proteins, gntR family BF25_4634 PF07729 FCD domain BF25_4635 PF00561 alpha/beta hydrolase fold BF25_4636 PF01380 SIS domain BF25_4637 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BF25_4637 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BF25_4637 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BF25_4637 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BF25_4638 PF07949 YbbR-like protein BF25_4639 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF25_4640 PF00491 Arginase family BF25_4641 PF02595 Glycerate kinase family BF25_4642 PF02595 Glycerate kinase family BF25_4657 PF01522 Polysaccharide deacetylase BF25_4658 PF14089 KinB-signalling pathway activation in sporulation BF25_4659 PF17898 Spore germination GerD central core domain BF25_4660 PF10609 NUBPL iron-transfer P-loop NTPase BF25_4661 PF01520 N-acetylmuramoyl-L-alanine amidase BF25_4663 PF00380 Ribosomal protein S9/S16 BF25_4664 PF00572 Ribosomal protein L13 BF25_4665 PF01416 tRNA pseudouridine synthase BF25_4666 PF02361 Cobalt transport protein BF25_4667 PF00005 ABC transporter BF25_4668 PF00005 ABC transporter BF25_4669 PF01196 Ribosomal protein L17 BF25_467 PF01202 Shikimate kinase BF25_4670 PF01000 RNA polymerase Rpb3/RpoA insert domain BF25_4670 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BF25_4670 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BF25_4671 PF00411 Ribosomal protein S11 BF25_4672 PF00416 Ribosomal protein S13/S18 BF25_4673 PF00444 Ribosomal protein L36 BF25_4674 PF01176 Translation initiation factor 1A / IF-1 BF25_4675 PF00557 Metallopeptidase family M24 BF25_4676 PF05191 Adenylate kinase, active site lid BF25_4677 PF00344 SecY translocase BF25_4678 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BF25_4679 PF00327 Ribosomal protein L30p/L7e BF25_468 PF14038 YqzE-like protein BF25_4680 PF00333 Ribosomal protein S5, N-terminal domain BF25_4680 PF03719 Ribosomal protein S5, C-terminal domain BF25_4681 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BF25_4682 PF00347 Ribosomal protein L6 BF25_4683 PF00410 Ribosomal protein S8 BF25_4684 PF00253 Ribosomal protein S14p/S29e BF25_4685 PF00673 ribosomal L5P family C-terminus BF25_4685 PF00281 Ribosomal protein L5 BF25_4686 PF00467 KOW motif BF25_4686 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BF25_4687 PF00238 Ribosomal protein L14p/L23e BF25_4688 PF00366 Ribosomal protein S17 BF25_4689 PF00831 Ribosomal L29 protein BF25_4690 PF00252 Ribosomal protein L16p/L10e BF25_4691 PF07650 KH domain BF25_4691 PF00189 Ribosomal protein S3, C-terminal domain BF25_4692 PF00237 Ribosomal protein L22p/L17e BF25_4693 PF00203 Ribosomal protein S19 BF25_4694 PF03947 Ribosomal Proteins L2, C-terminal domain BF25_4694 PF00181 Ribosomal Proteins L2, RNA binding domain BF25_4695 PF00276 Ribosomal protein L23 BF25_4696 PF00573 Ribosomal protein L4/L1 family BF25_4697 PF00297 Ribosomal protein L3 BF25_4698 PF00338 Ribosomal protein S10p/S20e BF25_4699 PF03143 Elongation factor Tu C-terminal domain BF25_4699 PF00009 Elongation factor Tu GTP binding domain BF25_4699 PF03144 Elongation factor Tu domain 2 BF25_47 PF02926 THUMP domain BF25_47 PF02568 Thiamine biosynthesis protein (ThiI) BF25_4700 PF00009 Elongation factor Tu GTP binding domain BF25_4700 PF03144 Elongation factor Tu domain 2 BF25_4700 PF03764 Elongation factor G, domain IV BF25_4700 PF14492 Elongation Factor G, domain II BF25_4700 PF00679 Elongation factor G C-terminus BF25_4701 PF00177 Ribosomal protein S7p/S5e BF25_4702 PF00164 Ribosomal protein S12/S23 BF25_4703 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BF25_4704 PF04983 RNA polymerase Rpb1, domain 3 BF25_4704 PF04998 RNA polymerase Rpb1, domain 5 BF25_4704 PF00623 RNA polymerase Rpb1, domain 2 BF25_4704 PF05000 RNA polymerase Rpb1, domain 4 BF25_4704 PF04997 RNA polymerase Rpb1, domain 1 BF25_4705 PF10385 RNA polymerase beta subunit external 1 domain BF25_4705 PF04560 RNA polymerase Rpb2, domain 7 BF25_4705 PF00562 RNA polymerase Rpb2, domain 6 BF25_4705 PF04563 RNA polymerase beta subunit BF25_4705 PF04561 RNA polymerase Rpb2, domain 2 BF25_4705 PF04565 RNA polymerase Rpb2, domain 3 BF25_4706 PF05175 Methyltransferase small domain BF25_4707 PF16320 Ribosomal protein L7/L12 dimerisation domain BF25_4707 PF00542 Ribosomal protein L7/L12 C-terminal domain BF25_4708 PF00466 Ribosomal protein L10 BF25_4709 PF00687 Ribosomal protein L1p/L10e family BF25_4710 PF00298 Ribosomal protein L11, RNA binding domain BF25_4710 PF03946 Ribosomal protein L11, N-terminal domain BF25_4711 PF00467 KOW motif BF25_4711 PF02357 Transcription termination factor nusG BF25_4712 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BF25_4713 PF08281 Sigma-70, region 4 BF25_4713 PF04542 Sigma-70 region 2 BF25_4714 PF05991 YacP-like NYN domain BF25_4715 PF08032 RNA 2'-O ribose methyltransferase substrate binding BF25_4715 PF00588 SpoU rRNA Methylase family BF25_4716 PF00636 Ribonuclease III domain BF25_4717 PF01406 tRNA synthetases class I (C) catalytic domain BF25_4717 PF09190 DALR domain BF25_4718 PF00132 Bacterial transferase hexapeptide (six repeats) BF25_4718 PF06426 Serine acetyltransferase, N-terminal BF25_4719 PF00749 tRNA synthetases class I (E and Q), catalytic domain BF25_472 PF11079 Bacterial protein YqhG of unknown function BF25_4720 PF02542 YgbB family BF25_4721 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BF25_4723 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF25_4723 PF10635 DisA bacterial checkpoint controller linker region BF25_4724 PF18073 Rubredoxin metal binding domain BF25_4725 PF02861 Clp amino terminal domain, pathogenicity island component BF25_4725 PF00004 ATPase family associated with various cellular activities (AAA) BF25_4725 PF07724 AAA domain (Cdc48 subfamily) BF25_4725 PF17871 AAA lid domain BF25_4725 PF10431 C-terminal, D2-small domain, of ClpB protein BF25_4726 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BF25_4727 PF02151 UvrB/uvrC motif BF25_4728 PF17727 CtsR C-terminal dimerization domain BF25_4728 PF05848 CtsR N-terminal HTH domain BF25_473 PF00176 SNF2 family N-terminal domain BF25_473 PF00271 Helicase conserved C-terminal domain BF25_4733 PF00152 tRNA synthetases class II (D, K and N) BF25_4733 PF01336 OB-fold nucleic acid binding domain BF25_4734 PF01207 Dihydrouridine synthase (Dus) BF25_4735 PF01381 Helix-turn-helix BF25_4736 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BF25_4737 PF02152 Dihydroneopterin aldolase BF25_4738 PF00809 Pterin binding enzyme BF25_4739 PF01063 Amino-transferase class IV BF25_474 PF01571 Aminomethyltransferase folate-binding domain BF25_474 PF08669 Glycine cleavage T-protein C-terminal barrel domain BF25_4740 PF00117 Glutamine amidotransferase class-I BF25_4741 PF04715 Anthranilate synthase component I, N terminal region BF25_4741 PF00425 chorismate binding enzyme BF25_4742 PF00291 Pyridoxal-phosphate dependent enzyme BF25_4743 PF01430 Hsp33 protein BF25_4744 PF03309 Type III pantothenate kinase BF25_4745 PF00004 ATPase family associated with various cellular activities (AAA) BF25_4745 PF17862 AAA+ lid domain BF25_4745 PF06480 FtsH Extracellular BF25_4745 PF01434 Peptidase family M41 BF25_4747 PF09179 TilS substrate binding domain BF25_4747 PF01171 PP-loop family BF25_4747 PF11734 TilS substrate C-terminal domain BF25_4748 PF07228 Stage II sporulation protein E (SpoIIE) BF25_475 PF02347 Glycine cleavage system P-protein BF25_4751 PF00575 S1 RNA binding domain BF25_4753 PF09578 Spore cortex protein YabQ (Spore_YabQ) BF25_4754 PF07873 YabP family BF25_4755 PF01479 S4 domain BF25_4756 PF03819 MazG nucleotide pyrophosphohydrolase domain BF25_4756 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF25_4757 PF14667 Polysaccharide biosynthesis C-terminal domain BF25_4757 PF01943 Polysaccharide biosynthesis protein BF25_4758 PF15714 Stage V sporulation protein T C-terminal, transcription factor BF25_4758 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF25_4759 PF17757 UvrB interaction domain BF25_4759 PF03461 TRCF domain BF25_4759 PF02559 CarD-like/TRCF domain BF25_4759 PF00271 Helicase conserved C-terminal domain BF25_4759 PF00270 DEAD/DEAH box helicase BF25_476 PF02347 Glycine cleavage system P-protein BF25_4761 PF01195 Peptidyl-tRNA hydrolase BF25_4762 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BF25_4762 PF14572 Phosphoribosyl synthetase-associated domain BF25_4763 PF00483 Nucleotidyl transferase BF25_4763 PF00132 Bacterial transferase hexapeptide (six repeats) BF25_4764 PF04026 SpoVG BF25_4765 PF01042 Endoribonuclease L-PSP BF25_4766 PF09182 Bacterial purine repressor, N-terminal BF25_4766 PF00156 Phosphoribosyl transferase domain BF25_4767 PF00288 GHMP kinases N terminal domain BF25_4767 PF08544 GHMP kinases C terminal BF25_4768 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF25_4769 PF06257 Biofilm formation stimulator VEG BF25_4770 PF05582 YabG peptidase U57 BF25_4771 PF00398 Ribosomal RNA adenine dimethylase BF25_4772 PF13331 Domain of unknown function (DUF4093) BF25_4772 PF13662 Toprim domain BF25_4773 PF01026 TatD related DNase BF25_4774 PF09334 tRNA synthetases class I (M) BF25_4774 PF08264 Anticodon-binding domain of tRNA BF25_4774 PF01588 Putative tRNA binding domain BF25_4775 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF25_4775 PF18277 AbrB C-terminal domain BF25_4776 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF25_4777 PF01541 GIY-YIG catalytic domain BF25_4778 PF05175 Methyltransferase small domain BF25_4779 PF06156 Initiation control protein YabA BF25_4780 PF04468 PSP1 C-terminal conserved region BF25_4781 PF09115 DNA polymerase III, delta subunit, C terminal BF25_4782 PF02223 Thymidylate kinase BF25_4783 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BF25_4783 PF01276 Orn/Lys/Arg decarboxylase, major domain BF25_479 PF00392 Bacterial regulatory proteins, gntR family BF25_4791 PF07441 SigmaK-factor processing regulatory protein BofA BF25_4792 PF10704 Protein of unknown function (DUF2508) BF25_4793 PF02132 RecR protein BF25_4793 PF13662 Toprim domain BF25_4794 PF02575 YbaB/EbfC DNA-binding family BF25_4795 PF12169 DNA polymerase III subunits gamma and tau domain III BF25_4796 PF14437 MafB19-like deaminase BF25_4797 PF00857 Isochorismatase family BF25_4798 PF01712 Deoxynucleoside kinase BF25_4799 PF01712 Deoxynucleoside kinase BF25_48 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF25_480 PF00005 ABC transporter BF25_4802 PF02403 Seryl-tRNA synthetase N-terminal domain BF25_4802 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF25_4803 PF01174 SNO glutamine amidotransferase family BF25_4804 PF01680 SOR/SNZ family BF25_4805 PF07943 Penicillin-binding protein 5, C-terminal domain BF25_4805 PF00768 D-alanyl-D-alanine carboxypeptidase BF25_4806 PF00571 CBS domain BF25_4806 PF00478 IMP dehydrogenase / GMP reductase domain BF25_4807 PF14175 YaaC-like Protein BF25_4814 PF00521 DNA gyrase/topoisomerase IV, subunit A BF25_4814 PF03989 DNA gyrase C-terminal domain, beta-propeller BF25_4815 PF01751 Toprim domain BF25_4815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_4815 PF00986 DNA gyrase B subunit, carboxyl terminus BF25_4815 PF00204 DNA gyrase B BF25_4816 PF02463 RecF/RecN/SMC N terminal domain BF25_4818 PF00712 DNA polymerase III beta subunit, N-terminal domain BF25_4818 PF02768 DNA polymerase III beta subunit, C-terminal domain BF25_4818 PF02767 DNA polymerase III beta subunit, central domain BF25_4819 PF00308 Bacterial dnaA protein BF25_4819 PF11638 DnaA N-terminal domain BF25_4819 PF08299 Bacterial dnaA protein helix-turn-helix BF25_4820 PF00468 Ribosomal protein L34 BF25_4821 PF00825 Ribonuclease P BF25_4822 PF02096 60Kd inner membrane protein BF25_4823 PF14804 Jag N-terminus BF25_4823 PF01424 R3H domain BF25_4824 PF12631 MnmE helical domain BF25_4824 PF01926 50S ribosome-binding GTPase BF25_4824 PF10396 GTP-binding protein TrmE N-terminus BF25_4825 PF13932 GidA associated domain BF25_4825 PF01134 Glucose inhibited division protein A BF25_4826 PF02527 rRNA small subunit methyltransferase G BF25_4827 PF02195 ParB-like nuclease domain BF25_4827 PF17762 HTH domain found in ParB protein BF25_4828 PF13614 AAA domain BF25_4829 PF17762 HTH domain found in ParB protein BF25_4829 PF02195 ParB-like nuclease domain BF25_4830 PF06866 Protein of unknown function (DUF1256) BF25_4831 PF00924 Mechanosensitive ion channel BF25_4832 PF06107 Bacterial protein of unknown function (DUF951) BF25_4833 PF01926 50S ribosome-binding GTPase BF25_4833 PF06071 Protein of unknown function (DUF933) BF25_4834 PF01250 Ribosomal protein S6 BF25_4835 PF00436 Single-strand binding protein family BF25_4836 PF01084 Ribosomal protein S18 BF25_4837 PF09991 Predicted membrane protein (DUF2232) BF25_4838 PF02272 DHHA1 domain BF25_4838 PF01368 DHH family BF25_4839 PF01281 Ribosomal protein L9, N-terminal domain BF25_4839 PF03948 Ribosomal protein L9, C-terminal domain BF25_4840 PF00772 DnaB-like helicase N terminal domain BF25_4840 PF03796 DnaB-like helicase C terminal domain BF25_4841 PF00709 Adenylosuccinate synthetase BF25_4846 PF00486 Transcriptional regulatory protein, C terminal BF25_4846 PF00072 Response regulator receiver domain BF25_4847 PF00672 HAMP domain BF25_4847 PF13426 PAS domain BF25_4847 PF00512 His Kinase A (phospho-acceptor) domain BF25_4847 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_4848 PF07435 YycH protein BF25_4849 PF09648 YycH protein BF25_4850 PF00753 Metallo-beta-lactamase superfamily BF25_4851 PF13180 PDZ domain BF25_4853 PF02590 Predicted SPOUT methyltransferase BF25_4855 PF08439 Oligopeptidase F BF25_4855 PF01432 Peptidase family M3 BF25_4856 PF00478 IMP dehydrogenase / GMP reductase domain BF25_4858 PF00271 Helicase conserved C-terminal domain BF25_4858 PF00270 DEAD/DEAH box helicase BF25_4858 PF03880 DbpA RNA binding domain BF25_4860 PF03006 Haemolysin-III related BF25_4861 PF16363 GDP-mannose 4,6 dehydratase BF25_4863 PF02293 AmiS/UreI family transporter BF25_4865 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF25_4865 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF25_4866 PF02898 Nitric oxide synthase, oxygenase domain BF25_4867 PF02028 BCCT, betaine/carnitine/choline family transporter BF25_4868 PF07690 Major Facilitator Superfamily BF25_4869 PF06580 Histidine kinase BF25_4869 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_4869 PF13492 GAF domain BF25_4869 PF07694 5TMR of 5TMR-LYT BF25_4870 PF04397 LytTr DNA-binding domain BF25_4870 PF00072 Response regulator receiver domain BF25_4871 PF03788 LrgA family BF25_4872 PF04172 LrgB-like family BF25_4873 PF01594 AI-2E family transporter BF25_4874 PF01641 SelR domain BF25_4874 PF01625 Peptide methionine sulfoxide reductase BF25_4875 PF00873 AcrB/AcrD/AcrF family BF25_4876 PF00440 Bacterial regulatory proteins, tetR family BF25_4877 PF00535 Glycosyl transferase family 2 BF25_488 PF00893 Small Multidrug Resistance protein BF25_4882 PF00005 ABC transporter BF25_4882 PF12848 ABC transporter BF25_4883 PF00535 Glycosyl transferase family 2 BF25_4885 PF03061 Thioesterase superfamily BF25_4887 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF25_4888 PF03458 UPF0126 domain BF25_489 PF00893 Small Multidrug Resistance protein BF25_4891 PF03808 Glycosyl transferase WecB/TagA/CpsF family BF25_4892 PF07690 Major Facilitator Superfamily BF25_4893 PF00072 Response regulator receiver domain BF25_4893 PF04397 LytTr DNA-binding domain BF25_4894 PF13722 5TM C-terminal transporter carbon starvation CstA BF25_4894 PF02554 Carbon starvation protein CstA BF25_4895 PF04328 Selenoprotein, putative BF25_4896 PF07694 5TMR of 5TMR-LYT BF25_4896 PF00990 Diguanylate cyclase, GGDEF domain BF25_4897 PF08543 Phosphomethylpyrimidine kinase BF25_4898 PF13185 GAF domain BF25_4898 PF07730 Histidine kinase BF25_4899 PF07730 Histidine kinase BF25_4899 PF13185 GAF domain BF25_49 PF13193 AMP-binding enzyme C-terminal domain BF25_49 PF00501 AMP-binding enzyme BF25_4900 PF00072 Response regulator receiver domain BF25_4900 PF00196 Bacterial regulatory proteins, luxR family BF25_4901 PF02525 Flavodoxin-like fold BF25_4902 PF00027 Cyclic nucleotide-binding domain BF25_4903 PF13419 Haloacid dehalogenase-like hydrolase BF25_4905 PF01053 Cys/Met metabolism PLP-dependent enzyme BF25_4906 PF04204 Homoserine O-succinyltransferase BF25_4907 PF03447 Homoserine dehydrogenase, NAD binding domain BF25_4907 PF00742 Homoserine dehydrogenase BF25_4907 PF01842 ACT domain BF25_4909 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF25_4909 PF00356 Bacterial regulatory proteins, lacI family BF25_491 PF00356 Bacterial regulatory proteins, lacI family BF25_491 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF25_4910 PF13472 GDSL-like Lipase/Acylhydrolase family BF25_4911 PF00005 ABC transporter BF25_4912 PF12679 ABC-2 family transporter protein BF25_4913 PF03167 Uracil DNA glycosylase superfamily BF25_4914 PF12823 Domain of unknown function (DUF3817) BF25_4916 PF00860 Permease family BF25_492 PF00581 Rhodanese-like domain BF25_4920 PF04241 Protein of unknown function (DUF423) BF25_4921 PF09671 Spore coat protein (Spore_GerQ) BF25_4922 PF07486 Cell Wall Hydrolase BF25_4923 PF00768 D-alanyl-D-alanine carboxypeptidase BF25_4923 PF07943 Penicillin-binding protein 5, C-terminal domain BF25_4925 PF01515 Phosphate acetyl/butaryl transferase BF25_4926 PF03099 Biotin/lipoate A/B protein ligase family BF25_4929 PF07293 Protein of unknown function (DUF1450) BF25_493 PF03099 Biotin/lipoate A/B protein ligase family BF25_4930 PF01032 FecCD transport family BF25_4931 PF01032 FecCD transport family BF25_4932 PF01032 FecCD transport family BF25_4933 PF00005 ABC transporter BF25_4934 PF01497 Periplasmic binding protein BF25_4935 PF01966 HD domain BF25_4936 PF01361 Tautomerase enzyme BF25_4937 PF02163 Peptidase family M50 BF25_4938 PF08741 YwhD family BF25_4939 PF00905 Penicillin binding protein transpeptidase domain BF25_4939 PF00912 Transglycosylase BF25_4940 PF03009 Glycerophosphoryl diester phosphodiesterase family BF25_4941 PF13411 MerR HTH family regulatory protein BF25_4942 PF07690 Major Facilitator Superfamily BF25_4943 PF17284 Spermidine synthase tetramerisation domain BF25_4944 PF00491 Arginase family BF25_4947 PF02016 LD-carboxypeptidase N-terminal domain BF25_4947 PF17676 LD-carboxypeptidase C-terminal domain BF25_4948 PF09148 Domain of unknown function (DUF1934) BF25_4949 PF00750 tRNA synthetases class I (R) BF25_4949 PF05746 DALR anticodon binding domain BF25_4949 PF03485 Arginyl tRNA synthetase N terminal domain BF25_4950 PF04542 Sigma-70 region 2 BF25_4950 PF08281 Sigma-70, region 4 BF25_4954 PF04389 Peptidase family M28 BF25_4954 PF02225 PA domain BF25_4955 PF01473 Putative cell wall binding repeat BF25_4955 PF02324 Glycosyl hydrolase family 70 BF25_4958 PF00557 Metallopeptidase family M24 BF25_4959 PF00005 ABC transporter BF25_496 PF02742 Iron dependent repressor, metal binding and dimerisation domain BF25_496 PF01325 Iron dependent repressor, N-terminal DNA binding domain BF25_4961 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_4961 PF07730 Histidine kinase BF25_4962 PF00196 Bacterial regulatory proteins, luxR family BF25_4962 PF00072 Response regulator receiver domain BF25_4966 PF03707 Bacterial signalling protein N terminal repeat BF25_4966 PF00563 EAL domain BF25_4966 PF00990 Diguanylate cyclase, GGDEF domain BF25_4967 PF03851 UV-endonuclease UvdE BF25_4968 PF13091 PLD-like domain BF25_4969 PF02754 Cysteine-rich domain BF25_4969 PF13183 4Fe-4S dicluster domain BF25_4970 PF02803 Thiolase, C-terminal domain BF25_4970 PF00108 Thiolase, N-terminal domain BF25_4971 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BF25_4971 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BF25_4972 PF02770 Acyl-CoA dehydrogenase, middle domain BF25_4972 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF25_4972 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF25_4973 PF02770 Acyl-CoA dehydrogenase, middle domain BF25_4973 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF25_4973 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF25_4975 PF05066 HB1, ASXL, restriction endonuclease HTH domain BF25_4976 PF00117 Glutamine amidotransferase class-I BF25_4976 PF06418 CTP synthase N-terminus BF25_4977 PF10740 Domain of unknown function (DUF2529) BF25_4978 PF00072 Response regulator receiver domain BF25_4979 PF01116 Fructose-bisphosphate aldolase class-II BF25_498 PF13419 Haloacid dehalogenase-like hydrolase BF25_4980 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF25_4981 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BF25_4982 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF25_4982 PF07498 Rho termination factor, N-terminal domain BF25_4982 PF07497 Rho termination factor, RNA-binding domain BF25_4983 PF01197 Ribosomal protein L31 BF25_4984 PF00265 Thymidine kinase BF25_4985 PF00472 RF-1 domain BF25_4985 PF03462 PCRF domain BF25_4986 PF13847 Methyltransferase domain BF25_4986 PF17827 PrmC N-terminal domain BF25_4987 PF09551 Stage II sporulation protein R (spore_II_R) BF25_4989 PF01300 Telomere recombination BF25_4989 PF03481 Putative GTP-binding controlling metal-binding BF25_499 PF07136 Protein of unknown function (DUF1385) BF25_4990 PF02659 Putative manganese efflux pump BF25_4992 PF01613 Flavin reductase like domain BF25_4993 PF07681 DoxX BF25_4994 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF25_4995 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF25_4996 PF02502 Ribose/Galactose Isomerase BF25_4997 PF04260 Protein of unknown function (DUF436) BF25_4998 PF00464 Serine hydroxymethyltransferase BF25_500 PF11085 Conserved membrane protein YqhR BF25_5001 PF03899 ATP synthase I chain BF25_5002 PF00119 ATP synthase A chain BF25_5003 PF00137 ATP synthase subunit C BF25_5004 PF00430 ATP synthase B/B' CF(0) BF25_5005 PF00213 ATP synthase delta (OSCP) subunit BF25_5006 PF00306 ATP synthase alpha/beta chain, C terminal domain BF25_5006 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF25_5006 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF25_5007 PF00231 ATP synthase BF25_5008 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF25_5008 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF25_5009 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BF25_5009 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BF25_501 PF01220 Dehydroquinase class II BF25_5012 PF00563 EAL domain BF25_5012 PF00990 Diguanylate cyclase, GGDEF domain BF25_5012 PF03707 Bacterial signalling protein N terminal repeat BF25_5013 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BF25_5014 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BF25_5015 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BF25_5016 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BF25_5017 PF00146 NADH dehydrogenase BF25_5019 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BF25_502 PF01321 Creatinase/Prolidase N-terminal domain BF25_502 PF00557 Metallopeptidase family M24 BF25_5020 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BF25_5021 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BF25_5021 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BF25_5021 PF00361 Proton-conducting membrane transporter BF25_5022 PF00361 Proton-conducting membrane transporter BF25_5023 PF00361 Proton-conducting membrane transporter BF25_5024 PF06612 Protein of unknown function (DUF1146) BF25_5026 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF25_5027 PF08486 Stage II sporulation protein BF25_5028 PF00005 ABC transporter BF25_5029 PF00072 Response regulator receiver domain BF25_5029 PF04397 LytTr DNA-binding domain BF25_503 PF01132 Elongation factor P (EF-P) OB domain BF25_503 PF08207 Elongation factor P (EF-P) KOW-like domain BF25_503 PF09285 Elongation factor P, C-terminal BF25_5030 PF00005 ABC transporter BF25_5032 PF01551 Peptidase family M23 BF25_5034 PF12116 Stage III sporulation protein D BF25_5042 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF25_5042 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF25_5042 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF25_5043 PF01061 ABC-2 type transporter BF25_5044 PF08239 Bacterial SH3 domain BF25_5044 PF00005 ABC transporter BF25_5045 PF02350 UDP-N-acetylglucosamine 2-epimerase BF25_5046 PF07977 FabA-like domain BF25_5047 PF03816 Cell envelope-related transcriptional attenuator domain BF25_5048 PF16363 GDP-mannose 4,6 dehydratase BF25_5049 PF00486 Transcriptional regulatory protein, C terminal BF25_5049 PF00072 Response regulator receiver domain BF25_5050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_5050 PF00512 His Kinase A (phospho-acceptor) domain BF25_5050 PF00989 PAS fold BF25_5050 PF16736 Single Cache-like BF25_5053 PF07690 Major Facilitator Superfamily BF25_5057 PF00005 ABC transporter BF25_5058 PF12704 MacB-like periplasmic core domain BF25_5058 PF02687 FtsX-like permease family BF25_5059 PF04893 Yip1 domain BF25_5060 PF04545 Sigma-70, region 4 BF25_5060 PF04542 Sigma-70 region 2 BF25_5066 PF00176 SNF2 family N-terminal domain BF25_5066 PF00271 Helicase conserved C-terminal domain BF25_5066 PF12419 SNF2 Helicase protein BF25_5067 PF04434 SWIM zinc finger BF25_5072 PF01476 LysM domain BF25_5072 PF06725 3D domain BF25_5073 PF02028 BCCT, betaine/carnitine/choline family transporter BF25_5078 PF01773 Na+ dependent nucleoside transporter N-terminus BF25_5078 PF07662 Na+ dependent nucleoside transporter C-terminus BF25_5079 PF00877 NlpC/P60 family BF25_5079 PF01476 LysM domain BF25_508 PF09548 Stage III sporulation protein AB (spore_III_AB) BF25_5081 PF01063 Amino-transferase class IV BF25_5082 PF00884 Sulfatase BF25_5085 PF09988 Uncharacterized metal-binding protein (DUF2227) BF25_5087 PF02652 L-lactate permease BF25_5088 PF01964 Radical SAM ThiC family BF25_5088 PF13667 ThiC-associated domain BF25_5089 PF02040 Arsenical pump membrane protein BF25_509 PF06686 Stage III sporulation protein AC/AD protein family BF25_5090 PF02322 Cytochrome bd terminal oxidase subunit II BF25_5091 PF01654 Cytochrome bd terminal oxidase subunit I BF25_5096 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF25_5096 PF03466 LysR substrate binding domain BF25_5098 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_51 PF07969 Amidohydrolase family BF25_510 PF06686 Stage III sporulation protein AC/AD protein family BF25_5100 PF00375 Sodium:dicarboxylate symporter family BF25_5101 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF25_5102 PF02378 Phosphotransferase system, EIIC BF25_5103 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF25_5104 PF02675 S-adenosylmethionine decarboxylase BF25_5106 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF25_5107 PF02378 Phosphotransferase system, EIIC BF25_5108 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF25_5109 PF02056 Family 4 glycosyl hydrolase BF25_5109 PF11975 Family 4 glycosyl hydrolase C-terminal domain BF25_511 PF09546 Stage III sporulation protein AE (spore_III_AE) BF25_5110 PF04794 YdjC-like protein BF25_5111 PF02417 Chromate transporter BF25_5113 PF00158 Sigma-54 interaction domain BF25_5113 PF03610 PTS system fructose IIA component BF25_5113 PF00874 PRD domain BF25_5115 PF00953 Glycosyl transferase family 4 BF25_5116 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF25_5116 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF25_5116 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF25_5117 PF02350 UDP-N-acetylglucosamine 2-epimerase BF25_5118 PF03816 Cell envelope-related transcriptional attenuator domain BF25_5119 PF09186 Domain of unknown function (DUF1949) BF25_5119 PF01205 Uncharacterized protein family UPF0029 BF25_512 PF09581 Stage III sporulation protein AF (Spore_III_AF) BF25_5120 PF02645 Uncharacterised protein, DegV family COG1307 BF25_5121 PF01638 HxlR-like helix-turn-helix BF25_5122 PF00877 NlpC/P60 family BF25_5122 PF01476 LysM domain BF25_5123 PF00271 Helicase conserved C-terminal domain BF25_5123 PF04851 Type III restriction enzyme, res subunit BF25_5125 PF00313 'Cold-shock' DNA-binding domain BF25_5126 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BF25_5126 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BF25_5127 PF07516 SecA Wing and Scaffold domain BF25_5127 PF01043 SecA preprotein cross-linking domain BF25_5127 PF07517 SecA DEAD-like domain BF25_5127 PF02810 SEC-C motif BF25_5128 PF00472 RF-1 domain BF25_5128 PF03462 PCRF domain BF25_5129 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BF25_5130 PF00005 ABC transporter BF25_5131 PF18075 FtsX extracellular domain BF25_5131 PF02687 FtsX-like permease family BF25_5132 PF17820 PDZ domain BF25_5132 PF03572 Peptidase family S41 BF25_5132 PF01471 Putative peptidoglycan binding domain BF25_5133 PF17820 PDZ domain BF25_5134 PF00664 ABC transporter transmembrane region BF25_5134 PF00005 ABC transporter BF25_5135 PF01906 Putative heavy-metal-binding BF25_5137 PF03358 NADPH-dependent FMN reductase BF25_5138 PF00376 MerR family regulatory protein BF25_5138 PF09278 MerR, DNA binding BF25_5139 PF03466 LysR substrate binding domain BF25_5139 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF25_514 PF12685 SpoIIIAH-like protein BF25_5140 PF03601 Conserved hypothetical protein 698 BF25_5144 PF13411 MerR HTH family regulatory protein BF25_5144 PF07739 TipAS antibiotic-recognition domain BF25_5147 PF12323 Helix-turn-helix domain BF25_5147 PF01385 Probable transposase BF25_5147 PF07282 Putative transposase DNA-binding domain BF25_5148 PF17757 UvrB interaction domain BF25_5148 PF02151 UvrB/uvrC motif BF25_5148 PF12344 Ultra-violet resistance protein B BF25_5148 PF00271 Helicase conserved C-terminal domain BF25_5148 PF04851 Type III restriction enzyme, res subunit BF25_5149 PF17760 UvrA interaction domain BF25_5149 PF17755 UvrA DNA-binding domain BF25_5149 PF00005 ABC transporter BF25_5151 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BF25_5152 PF02603 HPr Serine kinase N terminus BF25_5152 PF07475 HPr Serine kinase C-terminal domain BF25_5153 PF01790 Prolipoprotein diacylglyceryl transferase BF25_5154 PF13419 Haloacid dehalogenase-like hydrolase BF25_5155 PF14602 Hexapeptide repeat of succinyl-transferase BF25_5157 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_5159 PF00293 NUDIX domain BF25_516 PF00364 Biotin-requiring enzyme BF25_5160 PF03668 P-loop ATPase protein family BF25_5161 PF01933 Uncharacterised protein family UPF0052 BF25_5162 PF02650 WhiA C-terminal HTH domain BF25_5162 PF14527 WhiA LAGLIDADG-like domain BF25_5162 PF10298 WhiA N-terminal LAGLIDADG-like domain BF25_5163 PF00381 PTS HPr component phosphorylation site BF25_5164 PF00574 Clp protease BF25_5165 PF04239 Protein of unknown function (DUF421) BF25_5167 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF25_5168 PF07451 Stage V sporulation protein AD (SpoVAD) BF25_5169 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF25_517 PF02785 Biotin carboxylase C-terminal domain BF25_517 PF00289 Biotin carboxylase, N-terminal domain BF25_517 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF25_5173 PF00309 Sigma-54 factor, Activator interacting domain (AID) BF25_5173 PF04963 Sigma-54 factor, core binding domain BF25_5173 PF04552 Sigma-54, DNA binding domain BF25_5175 PF04198 Putative sugar-binding domain BF25_5176 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF25_5176 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BF25_5177 PF00162 Phosphoglycerate kinase BF25_5178 PF00121 Triosephosphate isomerase BF25_5179 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BF25_5179 PF01676 Metalloenzyme superfamily BF25_518 PF03780 Asp23 family, cell envelope-related function BF25_5180 PF03952 Enolase, N-terminal domain BF25_5180 PF00113 Enolase, C-terminal TIM barrel domain BF25_5181 PF02899 Phage integrase, N-terminal SAM-like domain BF25_5181 PF00589 Phage integrase family BF25_5186 PF04860 Phage portal protein BF25_519 PF01029 NusB family BF25_52 PF01513 ATP-NAD kinase BF25_520 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BF25_520 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BF25_5203 PF01156 Inosine-uridine preferring nucleoside hydrolase BF25_5204 PF03788 LrgA family BF25_5205 PF04172 LrgB-like family BF25_5206 PF03840 Preprotein translocase SecG subunit BF25_5207 PF12146 Serine aminopeptidase, S33 BF25_5208 PF00575 S1 RNA binding domain BF25_5208 PF17876 Cold shock domain BF25_5208 PF08206 Ribonuclease B OB domain BF25_5208 PF00773 RNB domain BF25_5209 PF01668 SmpB protein BF25_521 PF02601 Exonuclease VII, large subunit BF25_521 PF13742 OB-fold nucleic acid binding domain BF25_5210 PF00072 Response regulator receiver domain BF25_5210 PF00486 Transcriptional regulatory protein, C terminal BF25_5212 PF01032 FecCD transport family BF25_5213 PF01032 FecCD transport family BF25_5214 PF00005 ABC transporter BF25_5217 PF06146 Phosphate-starvation-inducible E BF25_5218 PF13302 Acetyltransferase (GNAT) domain BF25_522 PF02609 Exonuclease VII small subunit BF25_5221 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BF25_5222 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BF25_5224 PF00672 HAMP domain BF25_5224 PF17202 Single cache domain 3 BF25_5224 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF25_5226 PF01565 FAD binding domain BF25_5226 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BF25_5227 PF00579 tRNA synthetases class I (W and Y) BF25_5227 PF01479 S4 domain BF25_5228 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_5229 PF07849 Protein of unknown function (DUF1641) BF25_523 PF00348 Polyprenyl synthetase BF25_5230 PF01638 HxlR-like helix-turn-helix BF25_5231 PF07690 Major Facilitator Superfamily BF25_5232 PF00248 Aldo/keto reductase family BF25_5237 PF13460 NAD(P)H-binding BF25_5238 PF01235 Sodium:alanine symporter family BF25_5239 PF01235 Sodium:alanine symporter family BF25_524 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BF25_524 PF02779 Transketolase, pyrimidine binding domain BF25_524 PF02780 Transketolase, C-terminal domain BF25_5240 PF07662 Na+ dependent nucleoside transporter C-terminus BF25_5240 PF01773 Na+ dependent nucleoside transporter N-terminus BF25_5241 PF07662 Na+ dependent nucleoside transporter C-terminus BF25_5241 PF01773 Na+ dependent nucleoside transporter N-terminus BF25_5243 PF04235 Protein of unknown function (DUF418) BF25_5244 PF00210 Ferritin-like domain BF25_5246 PF03641 Possible lysine decarboxylase BF25_5249 PF00210 Ferritin-like domain BF25_525 PF01479 S4 domain BF25_525 PF01728 FtsJ-like methyltransferase BF25_5250 PF01235 Sodium:alanine symporter family BF25_5251 PF02080 TrkA-C domain BF25_5252 PF00999 Sodium/hydrogen exchanger family BF25_5254 PF01047 MarR family BF25_5255 PF17954 Quercetinase C-terminal cupin domain BF25_5255 PF02678 Pirin BF25_5256 PF07504 Fungalysin/Thermolysin Propeptide Motif BF25_5256 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF25_5256 PF01447 Thermolysin metallopeptidase, catalytic domain BF25_5256 PF03413 Peptidase propeptide and YPEB domain BF25_5257 PF01883 Iron-sulfur cluster assembly protein BF25_5258 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF25_5258 PF00672 HAMP domain BF25_5258 PF02743 Cache domain BF25_526 PF02863 Arginine repressor, C-terminal domain BF25_526 PF01316 Arginine repressor, DNA binding domain BF25_5260 PF08264 Anticodon-binding domain of tRNA BF25_5260 PF09334 tRNA synthetases class I (M) BF25_5262 PF16736 Single Cache-like BF25_5262 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_5262 PF00989 PAS fold BF25_5262 PF00512 His Kinase A (phospho-acceptor) domain BF25_5263 PF00072 Response regulator receiver domain BF25_5263 PF00486 Transcriptional regulatory protein, C terminal BF25_5264 PF03734 L,D-transpeptidase catalytic domain BF25_5264 PF17969 L,D-transpeptidase C-terminal domain BF25_5266 PF09335 SNARE associated Golgi protein BF25_527 PF13476 AAA domain BF25_5273 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF25_5273 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF25_5275 PF02096 60Kd inner membrane protein BF25_5277 PF13520 Amino acid permease BF25_5278 PF07690 Major Facilitator Superfamily BF25_528 PF05580 SpoIVB peptidase S55 BF25_528 PF17820 PDZ domain BF25_5282 PF00672 HAMP domain BF25_5282 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF25_5282 PF02743 Cache domain BF25_5283 PF01910 Thiamine-binding protein BF25_5284 PF10835 Protein of unknown function (DUF2573) BF25_5285 PF01619 Proline dehydrogenase BF25_5286 PF07943 Penicillin-binding protein 5, C-terminal domain BF25_5286 PF00768 D-alanyl-D-alanine carboxypeptidase BF25_5287 PF14115 YuzL-like protein BF25_5288 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BF25_5288 PF00378 Enoyl-CoA hydratase/isomerase BF25_5288 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BF25_5289 PF00108 Thiolase, N-terminal domain BF25_5289 PF02803 Thiolase, C-terminal domain BF25_529 PF08769 Sporulation initiation factor Spo0A C terminal BF25_529 PF00072 Response regulator receiver domain BF25_5290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF25_5290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF25_5290 PF02770 Acyl-CoA dehydrogenase, middle domain BF25_5291 PF00753 Metallo-beta-lactamase superfamily BF25_5292 PF13305 Tetracyclin repressor-like, C-terminal domain BF25_5292 PF00440 Bacterial regulatory proteins, tetR family BF25_5297 PF00056 lactate/malate dehydrogenase, NAD binding domain BF25_5297 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF25_5306 PF03960 ArsC family BF25_5307 PF01597 Glycine cleavage H-protein BF25_5308 PF01751 Toprim domain BF25_5309 PF00085 Thioredoxin BF25_531 PF14174 YycC-like protein BF25_5311 PF00005 ABC transporter BF25_5311 PF09383 NIL domain BF25_5312 PF00528 Binding-protein-dependent transport system inner membrane component BF25_5313 PF03180 NLPA lipoprotein BF25_5314 PF03180 NLPA lipoprotein BF25_5315 PF00005 ABC transporter BF25_5316 PF01458 Uncharacterized protein family (UPF0051) BF25_5317 PF00266 Aminotransferase class-V BF25_5318 PF01592 NifU-like N terminal domain BF25_5319 PF01458 Uncharacterized protein family (UPF0051) BF25_532 PF03009 Glycerophosphoryl diester phosphodiesterase family BF25_5320 PF04892 VanZ like family BF25_5321 PF03551 Transcriptional regulator PadR-like family BF25_5322 PF02872 5'-nucleotidase, C-terminal domain BF25_5323 PF08827 Domain of unknown function (DUF1805) BF25_5325 PF01551 Peptidase family M23 BF25_5326 PF04055 Radical SAM superfamily BF25_5326 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BF25_5330 PF10086 YhfC intramembrane metalloprotease BF25_5331 PF07739 TipAS antibiotic-recognition domain BF25_5331 PF13411 MerR HTH family regulatory protein BF25_5332 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BF25_5333 PF06265 Protein of unknown function (DUF1027) BF25_5336 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BF25_5337 PF01934 Protein of unknown function DUF86 BF25_5339 PF13344 Haloacid dehalogenase-like hydrolase BF25_534 PF02954 Bacterial regulatory protein, Fis family BF25_534 PF00989 PAS fold BF25_534 PF00158 Sigma-54 interaction domain BF25_5340 PF02525 Flavodoxin-like fold BF25_5342 PF04608 Phosphatidylglycerophosphatase A BF25_5345 PF01106 NifU-like domain BF25_5346 PF07315 Protein of unknown function (DUF1462) BF25_535 PF01515 Phosphate acetyl/butaryl transferase BF25_5354 PF08274 PhnA Zinc-Ribbon BF25_5354 PF03831 PhnA domain BF25_5355 PF03649 Uncharacterised protein family (UPF0014) BF25_5356 PF00005 ABC transporter BF25_5356 PF09383 NIL domain BF25_5357 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_5358 PF07293 Protein of unknown function (DUF1450) BF25_5359 PF01678 Diaminopimelate epimerase BF25_536 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF25_536 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BF25_5360 PF01521 Iron-sulphur cluster biosynthesis BF25_5363 PF04463 Protein of unknown function (DUF523) BF25_5366 PF06445 GyrI-like small molecule binding domain BF25_5369 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_537 PF00871 Acetokinase family BF25_5370 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_5371 PF00293 NUDIX domain BF25_5371 PF13344 Haloacid dehalogenase-like hydrolase BF25_5373 PF06725 3D domain BF25_5374 PF00883 Cytosol aminopeptidase family, catalytic domain BF25_5374 PF02789 Cytosol aminopeptidase family, N-terminal domain BF25_5375 PF10372 Bacterial membrane-spanning protein N-terminus BF25_5375 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF25_5376 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BF25_5376 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BF25_5376 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BF25_5376 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BF25_5377 PF00483 Nucleotidyl transferase BF25_5379 PF02632 BioY family BF25_538 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_538 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF25_5381 PF03061 Thioesterase superfamily BF25_5382 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF25_5382 PF03129 Anticodon binding domain BF25_5385 PF03600 Citrate transporter BF25_5386 PF00929 Exonuclease BF25_5387 PF08810 Kinase associated protein B BF25_539 PF00676 Dehydrogenase E1 component BF25_5390 PF00155 Aminotransferase class I and II BF25_5392 PF08386 TAP-like protein BF25_5392 PF00561 alpha/beta hydrolase fold BF25_5393 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF25_5393 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF25_5394 PF01037 Lrp/AsnC ligand binding domain BF25_5395 PF00155 Aminotransferase class I and II BF25_5396 PF00575 S1 RNA binding domain BF25_5397 PF04070 Domain of unknown function (DUF378) BF25_5398 PF00342 Phosphoglucose isomerase BF25_5399 PF07885 Ion channel BF25_5399 PF02254 TrkA-N domain BF25_54 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BF25_540 PF02779 Transketolase, pyrimidine binding domain BF25_540 PF02780 Transketolase, C-terminal domain BF25_5400 PF08868 YugN-like family BF25_5401 PF02308 MgtC family BF25_5409 PF05698 Bacterial trigger factor protein (TF) C-terminus BF25_5409 PF05697 Bacterial trigger factor protein (TF) BF25_541 PF02817 e3 binding domain BF25_541 PF00364 Biotin-requiring enzyme BF25_541 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF25_542 PF01098 Cell cycle protein BF25_5428 PF00056 lactate/malate dehydrogenase, NAD binding domain BF25_5428 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF25_5429 PF00128 Alpha amylase, catalytic domain BF25_5429 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF25_5429 PF02806 Alpha amylase, C-terminal all-beta domain BF25_543 PF00293 NUDIX domain BF25_543 PF09297 NADH pyrophosphatase zinc ribbon domain BF25_5430 PF00483 Nucleotidyl transferase BF25_5431 PF00483 Nucleotidyl transferase BF25_5432 PF08323 Starch synthase catalytic domain BF25_5432 PF00534 Glycosyl transferases group 1 BF25_5433 PF00343 Carbohydrate phosphorylase BF25_5437 PF00313 'Cold-shock' DNA-binding domain BF25_5438 PF01258 Prokaryotic dksA/traR C4-type zinc finger BF25_5439 PF01040 UbiA prenyltransferase family BF25_544 PF11208 Protein of unknown function (DUF2992) BF25_5440 PF00425 chorismate binding enzyme BF25_5441 PF16582 Middle domain of thiamine pyrophosphate BF25_5441 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF25_5441 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF25_5442 PF00561 alpha/beta hydrolase fold BF25_5443 PF00378 Enoyl-CoA hydratase/isomerase BF25_5444 PF00501 AMP-binding enzyme BF25_5444 PF13193 AMP-binding enzyme C-terminal domain BF25_5445 PF13378 Enolase C-terminal domain-like BF25_5445 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF25_5446 PF00486 Transcriptional regulatory protein, C terminal BF25_5446 PF00072 Response regulator receiver domain BF25_5447 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_5447 PF00512 His Kinase A (phospho-acceptor) domain BF25_5448 PF02557 D-alanyl-D-alanine carboxypeptidase BF25_545 PF06491 Disulphide isomerase BF25_5451 PF01979 Amidohydrolase family BF25_5452 PF03841 L-seryl-tRNA selenium transferase BF25_5453 PF07071 KDGP aldolase BF25_5456 PF02447 GntP family permease BF25_5458 PF02687 FtsX-like permease family BF25_5459 PF02687 FtsX-like permease family BF25_546 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF25_5460 PF00005 ABC transporter BF25_5461 PF02687 FtsX-like permease family BF25_5462 PF02687 FtsX-like permease family BF25_5464 PF02687 FtsX-like permease family BF25_5465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_5466 PF00072 Response regulator receiver domain BF25_5466 PF00486 Transcriptional regulatory protein, C terminal BF25_5467 PF06445 GyrI-like small molecule binding domain BF25_5467 PF12833 Helix-turn-helix domain BF25_5468 PF00005 ABC transporter BF25_5469 PF02687 FtsX-like permease family BF25_547 PF00528 Binding-protein-dependent transport system inner membrane component BF25_5470 PF00398 Ribosomal RNA adenine dimethylase BF25_5471 PF09335 SNARE associated Golgi protein BF25_5474 PF00248 Aldo/keto reductase family BF25_5478 PF00781 Diacylglycerol kinase catalytic domain BF25_5479 PF00156 Phosphoribosyl transferase domain BF25_548 PF00005 ABC transporter BF25_5484 PF00486 Transcriptional regulatory protein, C terminal BF25_5484 PF00072 Response regulator receiver domain BF25_5485 PF00672 HAMP domain BF25_5485 PF00512 His Kinase A (phospho-acceptor) domain BF25_5485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_5486 PF09515 Thiamine transporter protein (Thia_YuaJ) BF25_5488 PF17910 FeoB cytosolic helical domain BF25_5488 PF07670 Nucleoside recognition BF25_5488 PF02421 Ferrous iron transport protein B BF25_5488 PF07664 Ferrous iron transport protein B C terminus BF25_549 PF11728 Putative aromatic acid exporter C-terminal domain BF25_549 PF06081 Aromatic acid exporter family member 1 BF25_5492 PF04012 PspA/IM30 family BF25_5497 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF25_5497 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF25_55 PF08534 Redoxin BF25_550 PF03734 L,D-transpeptidase catalytic domain BF25_5500 PF10676 Spore germination protein gerPA/gerPF BF25_5501 PF02322 Cytochrome bd terminal oxidase subunit II BF25_5502 PF01654 Cytochrome bd terminal oxidase subunit I BF25_5503 PF01809 Putative membrane protein insertion efficiency factor BF25_5504 PF00484 Carbonic anhydrase BF25_5505 PF02664 S-Ribosylhomocysteinase (LuxS) BF25_5509 PF00293 NUDIX domain BF25_5515 PF00528 Binding-protein-dependent transport system inner membrane component BF25_5516 PF00005 ABC transporter BF25_552 PF13302 Acetyltransferase (GNAT) domain BF25_5521 PF00884 Sulfatase BF25_5522 PF00561 alpha/beta hydrolase fold BF25_5522 PF08386 TAP-like protein BF25_5523 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_5523 PF00512 His Kinase A (phospho-acceptor) domain BF25_5523 PF08447 PAS fold BF25_5523 PF00989 PAS fold BF25_5524 PF13188 PAS domain BF25_5524 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_5524 PF00512 His Kinase A (phospho-acceptor) domain BF25_5524 PF00989 PAS fold BF25_5524 PF13426 PAS domain BF25_5525 PF01784 NIF3 (NGG1p interacting factor 3) BF25_553 PF07687 Peptidase dimerisation domain BF25_553 PF01546 Peptidase family M20/M25/M40 BF25_5531 PF01293 Phosphoenolpyruvate carboxykinase BF25_5532 PF02773 S-adenosylmethionine synthetase, C-terminal domain BF25_5532 PF00438 S-adenosylmethionine synthetase, N-terminal domain BF25_5532 PF02772 S-adenosylmethionine synthetase, central domain BF25_5535 PF00994 Probable molybdopterin binding domain BF25_5536 PF12804 MobA-like NTP transferase domain BF25_5537 PF13439 Glycosyltransferase Family 4 BF25_5537 PF00534 Glycosyl transferases group 1 BF25_5538 PF01569 PAP2 superfamily BF25_5539 PF00132 Bacterial transferase hexapeptide (six repeats) BF25_5540 PF12146 Serine aminopeptidase, S33 BF25_5541 PF10776 Protein of unknown function (DUF2600) BF25_5544 PF01177 Asp/Glu/Hydantoin racemase BF25_5546 PF13732 Domain of unknown function (DUF4162) BF25_5546 PF00005 ABC transporter BF25_5547 PF06962 Putative rRNA methylase BF25_5548 PF04055 Radical SAM superfamily BF25_5548 PF16199 Radical_SAM C-terminal domain BF25_5549 PF10732 Protein of unknown function (DUF2524) BF25_555 PF00817 impB/mucB/samB family BF25_555 PF11798 IMS family HHH motif BF25_555 PF11799 impB/mucB/samB family C-terminal domain BF25_5551 PF07786 Protein of unknown function (DUF1624) BF25_5551 PF04235 Protein of unknown function (DUF418) BF25_5552 PF00005 ABC transporter BF25_5554 PF00589 Phage integrase family BF25_5555 PF02080 TrkA-C domain BF25_5556 PF00999 Sodium/hydrogen exchanger family BF25_5557 PF07690 Major Facilitator Superfamily BF25_5558 PF00133 tRNA synthetases class I (I, L, M and V) BF25_5558 PF13603 Leucyl-tRNA synthetase, Domain 2 BF25_5558 PF09334 tRNA synthetases class I (M) BF25_5558 PF08264 Anticodon-binding domain of tRNA BF25_5563 PF03845 Spore germination protein BF25_5564 PF03323 Bacillus/Clostridium GerA spore germination protein BF25_5565 PF00561 alpha/beta hydrolase fold BF25_5567 PF00581 Rhodanese-like domain BF25_557 PF00753 Metallo-beta-lactamase superfamily BF25_557 PF12706 Beta-lactamase superfamily domain BF25_5571 PF06463 Molybdenum Cofactor Synthesis C BF25_5571 PF04055 Radical SAM superfamily BF25_5572 PF00899 ThiF family BF25_5573 PF01967 MoaC family BF25_5574 PF03453 MoeA N-terminal region (domain I and II) BF25_5574 PF00994 Probable molybdopterin binding domain BF25_5574 PF03454 MoeA C-terminal region (domain IV) BF25_5575 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BF25_5576 PF02391 MoaE protein BF25_5579 PF06800 Sugar transport protein BF25_558 PF01842 ACT domain BF25_558 PF03315 Serine dehydratase beta chain BF25_5581 PF02559 CarD-like/TRCF domain BF25_5583 PF10957 Sporulation protein Cse60 BF25_5585 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BF25_5586 PF01022 Bacterial regulatory protein, arsR family BF25_5587 PF07690 Major Facilitator Superfamily BF25_5589 PF14667 Polysaccharide biosynthesis C-terminal domain BF25_5589 PF01943 Polysaccharide biosynthesis protein BF25_559 PF03313 Serine dehydratase alpha chain BF25_5590 PF00849 RNA pseudouridylate synthase BF25_5590 PF01479 S4 domain BF25_5591 PF08220 DeoR-like helix-turn-helix domain BF25_5592 PF01546 Peptidase family M20/M25/M40 BF25_5593 PF01546 Peptidase family M20/M25/M40 BF25_5594 PF02834 LigT like Phosphoesterase BF25_5595 PF00128 Alpha amylase, catalytic domain BF25_5595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF25_5595 PF17999 Pullulanase N1-terminal domain BF25_5596 PF01636 Phosphotransferase enzyme family BF25_5597 PF14165 YtzH-like protein BF25_5598 PF02390 Putative methyltransferase BF25_5599 PF00753 Metallo-beta-lactamase superfamily BF25_56 PF02384 N-6 DNA Methylase BF25_560 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF25_560 PF03807 NADP oxidoreductase coenzyme F420-dependent BF25_5601 PF05343 M42 glutamyl aminopeptidase BF25_5607 PF04235 Protein of unknown function (DUF418) BF25_5610 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) BF25_562 PF00753 Metallo-beta-lactamase superfamily BF25_563 PF00106 short chain dehydrogenase BF25_5636 PF00437 Type II/IV secretion system protein BF25_565 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF25_565 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF25_5655 PF01580 FtsK/SpoIIIE family BF25_5655 PF17854 FtsK alpha domain BF25_5655 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BF25_5655 PF09397 Ftsk gamma domain BF25_566 PF01960 ArgJ family BF25_5660 PF01609 Transposase DDE domain BF25_5661 PF01609 Transposase DDE domain BF25_5666 PF01609 Transposase DDE domain BF25_567 PF00696 Amino acid kinase family BF25_568 PF00202 Aminotransferase class-III BF25_5680 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF25_569 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BF25_569 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BF25_57 PF00871 Acetokinase family BF25_5702 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF25_5710 PF08378 Nuclease-related domain BF25_5716 PF13342 C-terminal repeat of topoisomerase BF25_5716 PF01751 Toprim domain BF25_5716 PF01131 DNA topoisomerase BF25_5718 PF00565 Staphylococcal nuclease homologue BF25_572 PF01037 Lrp/AsnC ligand binding domain BF25_572 PF13404 AsnC-type helix-turn-helix domain BF25_5721 PF02600 Disulfide bond formation protein DsbB BF25_5722 PF01022 Bacterial regulatory protein, arsR family BF25_5723 PF17209 Hfq protein BF25_5725 PF18801 response regulator aspartate phosphatase H, N terminal BF25_5730 PF00589 Phage integrase family BF25_5732 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BF25_5733 PF01609 Transposase DDE domain BF25_5734 PF13276 HTH-like domain BF25_5734 PF00665 Integrase core domain BF25_5734 PF13333 Integrase core domain BF25_5737 PF13333 Integrase core domain BF25_5737 PF13276 HTH-like domain BF25_5737 PF00665 Integrase core domain BF25_5739 PF14436 Bacterial EndoU nuclease BF25_5739 PF04740 LXG domain of WXG superfamily BF25_574 PF02872 5'-nucleotidase, C-terminal domain BF25_574 PF00149 Calcineurin-like phosphoesterase BF25_5746 PF02899 Phage integrase, N-terminal SAM-like domain BF25_5746 PF00589 Phage integrase family BF25_5748 PF18277 AbrB C-terminal domain BF25_5748 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF25_5753 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain BF25_5753 PF09156 Anthrax toxin lethal factor, middle domain BF25_5757 PF01022 Bacterial regulatory protein, arsR family BF25_5758 PF07691 PA14 domain BF25_5758 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain BF25_5758 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 BF25_5758 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 BF25_5760 PF05504 Spore germination B3/ GerAC like, C-terminal BF25_5761 PF03323 Bacillus/Clostridium GerA spore germination protein BF25_5762 PF03845 Spore germination protein BF25_5763 PF00239 Resolvase, N terminal domain BF25_5763 PF02796 Helix-turn-helix domain of resolvase BF25_5764 PF01526 Tn3 transposase DDE domain BF25_5764 PF13700 Domain of unknown function (DUF4158) BF25_5768 PF09385 Histidine kinase N terminal BF25_5769 PF05043 Mga helix-turn-helix domain BF25_5769 PF08279 HTH domain BF25_5769 PF00874 PRD domain BF25_577 PF00202 Aminotransferase class-III BF25_5774 PF00156 Phosphoribosyl transferase domain BF25_5775 PF03497 Anthrax toxin LF subunit BF25_5775 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain BF25_5783 PF13276 HTH-like domain BF25_5783 PF00665 Integrase core domain BF25_5783 PF13333 Integrase core domain BF25_5786 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF25_5786 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF25_5786 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF25_5787 PF00483 Nucleotidyl transferase BF25_5788 PF00535 Glycosyl transferase family 2 BF25_579 PF00155 Aminotransferase class I and II BF25_5791 PF01569 PAP2 superfamily BF25_5797 PF05043 Mga helix-turn-helix domain BF25_5797 PF00874 PRD domain BF25_5797 PF08280 M protein trans-acting positive regulator (MGA) HTH domain BF25_5799 PF01810 LysE type translocator BF25_580 PF12697 Alpha/beta hydrolase family BF25_580 PF08241 Methyltransferase domain BF25_5802 PF00874 PRD domain BF25_5802 PF08279 HTH domain BF25_5802 PF05043 Mga helix-turn-helix domain BF25_5803 PF00874 PRD domain BF25_5803 PF05043 Mga helix-turn-helix domain BF25_5803 PF08279 HTH domain BF25_5804 PF09385 Histidine kinase N terminal BF25_5807 PF10502 Signal peptidase, peptidase S26 BF25_5809 PF01609 Transposase DDE domain BF25_581 PF13847 Methyltransferase domain BF25_5810 PF01022 Bacterial regulatory protein, arsR family BF25_5812 PF08245 Mur ligase middle domain BF25_5813 PF14102 Capsule biosynthesis CapC BF25_5814 PF09587 Bacterial capsule synthesis protein PGA_cap BF25_5818 PF08280 M protein trans-acting positive regulator (MGA) HTH domain BF25_5818 PF05043 Mga helix-turn-helix domain BF25_582 PF04055 Radical SAM superfamily BF25_582 PF06968 Biotin and Thiamin Synthesis associated domain BF25_5820 PF01569 PAP2 superfamily BF25_5821 PF01569 PAP2 superfamily BF25_5822 PF01609 Transposase DDE domain BF25_5823 PF01609 Transposase DDE domain BF25_5824 PF00440 Bacterial regulatory proteins, tetR family BF25_5825 PF04463 Protein of unknown function (DUF523) BF25_5826 PF02517 CPBP intramembrane metalloprotease BF25_5828 PF01906 Putative heavy-metal-binding BF25_583 PF00885 6,7-dimethyl-8-ribityllumazine synthase BF25_5832 PF00665 Integrase core domain BF25_5832 PF13333 Integrase core domain BF25_5832 PF13276 HTH-like domain BF25_5833 PF00395 S-layer homology domain BF25_5833 PF01520 N-acetylmuramoyl-L-alanine amidase BF25_5836 PF13614 AAA domain BF25_5837 PF08708 Primase C terminal 1 (PriCT-1) BF25_5842 PF17362 Family of unknown function BF25_5845 PF17631 Family of unknown function (DUF5512) BF25_585 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BF25_585 PF00925 GTP cyclohydrolase II BF25_5854 PF00437 Type II/IV secretion system protein BF25_586 PF00677 Lumazine binding domain BF25_5860 PF04956 TrbC/VIRB2 family BF25_5863 PF12696 TraM recognition site of TraD and TraG BF25_587 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF25_587 PF01872 RibD C-terminal domain BF25_5870 PF00877 NlpC/P60 family BF25_5872 PF17632 Family of unknown function (DUF5513) BF25_5877 PF17633 Family of unknown function (DUF5514) BF25_5878 PF17630 Family of unknown function (DUF5511) BF25_5879 PF18840 Large polyvalent protein associated domain 25 BF25_5882 PF13154 Protein of unknown function (DUF3991) BF25_5883 PF01751 Toprim domain BF25_5883 PF01131 DNA topoisomerase BF25_5884 PF01131 DNA topoisomerase BF25_5884 PF01751 Toprim domain BF25_589 PF10827 Protein of unknown function (DUF2552) BF25_5890 PF17443 Uncharacterized protein pXO2-72 BF25_5894 PF11798 IMS family HHH motif BF25_5894 PF11799 impB/mucB/samB family C-terminal domain BF25_5894 PF00817 impB/mucB/samB family BF25_5895 PF13411 MerR HTH family regulatory protein BF25_5895 PF13152 Protein of unknown function (DUF3967) BF25_590 PF12146 Serine aminopeptidase, S33 BF25_591 PF00583 Acetyltransferase (GNAT) family BF25_592 PF00356 Bacterial regulatory proteins, lacI family BF25_593 PF13726 Na+-H+ antiporter family BF25_593 PF03553 Na+/H+ antiporter family BF25_594 PF12146 Serine aminopeptidase, S33 BF25_596 PF02872 5'-nucleotidase, C-terminal domain BF25_596 PF00565 Staphylococcal nuclease homologue BF25_596 PF00746 LPXTG cell wall anchor motif BF25_596 PF00149 Calcineurin-like phosphoesterase BF25_598 PF04229 GrpB protein BF25_598 PF13673 Acetyltransferase (GNAT) domain BF25_599 PF00248 Aldo/keto reductase family BF25_6 PF01580 FtsK/SpoIIIE family BF25_6 PF17854 FtsK alpha domain BF25_6 PF09397 Ftsk gamma domain BF25_60 PF12787 EcsC protein family BF25_600 PF00248 Aldo/keto reductase family BF25_601 PF13072 Mother cell inhibitor of FtsZ BF25_602 PF00293 NUDIX domain BF25_604 PF01944 Stage II sporulation protein M BF25_605 PF01475 Ferric uptake regulator family BF25_606 PF14004 Protein of unknown function (DUF4227) BF25_607 PF00589 Phage integrase family BF25_607 PF02899 Phage integrase, N-terminal SAM-like domain BF25_609 PF01676 Metalloenzyme superfamily BF25_61 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF25_61 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF25_610 PF01048 Phosphorylase superfamily BF25_611 PF00591 Glycosyl transferase family, a/b domain BF25_611 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BF25_611 PF02885 Glycosyl transferase family, helical bundle domain BF25_612 PF01544 CorA-like Mg2+ transporter protein BF25_613 PF00860 Permease family BF25_615 PF01047 MarR family BF25_618 PF00005 ABC transporter BF25_619 PF00392 Bacterial regulatory proteins, gntR family BF25_620 PF00768 D-alanyl-D-alanine carboxypeptidase BF25_620 PF07943 Penicillin-binding protein 5, C-terminal domain BF25_621 PF01740 STAS domain BF25_622 PF13581 Histidine kinase-like ATPase domain BF25_623 PF04545 Sigma-70, region 4 BF25_623 PF04539 Sigma-70 region 3 BF25_623 PF04542 Sigma-70 region 2 BF25_624 PF00209 Sodium:neurotransmitter symporter family BF25_626 PF12164 Stage V sporulation protein AA BF25_627 PF13782 Stage V sporulation protein AB BF25_628 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF25_629 PF07451 Stage V sporulation protein AD (SpoVAD) BF25_630 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF25_631 PF14097 Stage V sporulation protein AE1 BF25_632 PF03323 Bacillus/Clostridium GerA spore germination protein BF25_634 PF06207 Protein of unknown function (DUF1002) BF25_635 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BF25_636 PF00583 Acetyltransferase (GNAT) family BF25_637 PF03745 Domain of unknown function (DUF309) BF25_639 PF02616 Segregation and condensation protein ScpA BF25_640 PF04079 Segregation and condensation complex subunit ScpB BF25_642 PF01979 Amidohydrolase family BF25_643 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BF25_646 PF00874 PRD domain BF25_646 PF03123 CAT RNA binding domain BF25_647 PF00367 phosphotransferase system, EIIB BF25_647 PF02378 Phosphotransferase system, EIIC BF25_647 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF25_648 PF00381 PTS HPr component phosphorylation site BF25_649 PF05524 PEP-utilising enzyme, N-terminal BF25_649 PF02896 PEP-utilising enzyme, TIM barrel domain BF25_649 PF00391 PEP-utilising enzyme, mobile domain BF25_65 PF00764 Arginosuccinate synthase BF25_652 PF00881 Nitroreductase family BF25_653 PF00990 Diguanylate cyclase, GGDEF domain BF25_654 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BF25_654 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF25_655 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF25_655 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BF25_658 PF03079 ARD/ARD' family BF25_659 PF00596 Class II Aldolase and Adducin N-terminal domain BF25_66 PF00206 Lyase BF25_66 PF14698 Argininosuccinate lyase C-terminal BF25_661 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BF25_661 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BF25_662 PF00155 Aminotransferase class I and II BF25_663 PF00795 Carbon-nitrogen hydrolase BF25_664 PF01636 Phosphotransferase enzyme family BF25_668 PF03551 Transcriptional regulator PadR-like family BF25_674 PF00293 NUDIX domain BF25_675 PF00108 Thiolase, N-terminal domain BF25_675 PF02803 Thiolase, C-terminal domain BF25_683 PF03459 TOBE domain BF25_683 PF17912 MalK OB fold domain BF25_683 PF00005 ABC transporter BF25_684 PF16657 Maltogenic Amylase, C-terminal domain BF25_684 PF00128 Alpha amylase, catalytic domain BF25_685 PF16657 Maltogenic Amylase, C-terminal domain BF25_685 PF02903 Alpha amylase, N-terminal ig-like domain BF25_685 PF00128 Alpha amylase, catalytic domain BF25_686 PF13416 Bacterial extracellular solute-binding protein BF25_687 PF00528 Binding-protein-dependent transport system inner membrane component BF25_688 PF00528 Binding-protein-dependent transport system inner membrane component BF25_689 PF00356 Bacterial regulatory proteins, lacI family BF25_689 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF25_690 PF00155 Aminotransferase class I and II BF25_692 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF25_692 PF00512 His Kinase A (phospho-acceptor) domain BF25_694 PF14040 Deoxyribonuclease NucA/NucB BF25_696 PF08267 Cobalamin-independent synthase, N-terminal domain BF25_696 PF01717 Cobalamin-independent synthase, Catalytic domain BF25_698 PF07690 Major Facilitator Superfamily BF25_70 PF00582 Universal stress protein family BF25_703 PF14177 YkyB-like protein BF25_704 PF02541 Ppx/GppA phosphatase family BF25_705 PF13089 Polyphosphate kinase N-terminal domain BF25_705 PF17941 Polyphosphate kinase C-terminal domain 1 BF25_705 PF13090 Polyphosphate kinase C-terminal domain 2 BF25_705 PF02503 Polyphosphate kinase middle domain BF25_707 PF00149 Calcineurin-like phosphoesterase BF25_707 PF10518 TAT (twin-arginine translocation) pathway signal sequence BF25_709 PF00563 EAL domain BF25_709 PF10388 EAL-domain associated signalling protein domain BF25_712 PF08796 Protein of unknown function (DUF1797) BF25_714 PF04308 Ribonuclease H-like BF25_717 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF25_717 PF03466 LysR substrate binding domain BF25_718 PF00132 Bacterial transferase hexapeptide (six repeats) BF25_718 PF14602 Hexapeptide repeat of succinyl-transferase BF25_718 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BF25_719 PF01546 Peptidase family M20/M25/M40 BF25_719 PF07687 Peptidase dimerisation domain BF25_72 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF25_72 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BF25_721 PF02080 TrkA-C domain BF25_721 PF02254 TrkA-N domain BF25_722 PF17770 Ribonuclease J C-terminal domain BF25_722 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BF25_722 PF00753 Metallo-beta-lactamase superfamily BF25_725 PF01327 Polypeptide deformylase BF25_727 PF00676 Dehydrogenase E1 component BF25_728 PF02780 Transketolase, C-terminal domain BF25_728 PF02779 Transketolase, pyrimidine binding domain BF25_729 PF02817 e3 binding domain BF25_729 PF00364 Biotin-requiring enzyme BF25_729 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF25_730 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF25_730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF25_738 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BF25_738 PF01276 Orn/Lys/Arg decarboxylase, major domain BF25_739 PF05256 Uncharacterised protein family (UPF0223) BF25_74 PF01381 Helix-turn-helix BF25_740 PF06335 Protein of unknown function (DUF1054) BF25_742 PF00459 Inositol monophosphatase family BF25_745 PF14036 YlaH-like protein BF25_747 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BF25_749 PF13638 PIN domain BF25_749 PF02562 PhoH-like protein BF25_751 PF07408 Protein of unknown function (DUF1507) BF25_752 PF01098 Cell cycle protein BF25_753 PF02785 Biotin carboxylase C-terminal domain BF25_753 PF00682 HMGL-like BF25_753 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF25_753 PF00364 Biotin-requiring enzyme BF25_753 PF00289 Biotin carboxylase, N-terminal domain BF25_753 PF02436 Conserved carboxylase domain BF25_754 PF02628 Cytochrome oxidase assembly protein BF25_755 PF01040 UbiA prenyltransferase family BF25_756 PF00034 Cytochrome c BF25_756 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BF25_756 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BF25_757 PF00115 Cytochrome C and Quinol oxidase polypeptide I BF25_758 PF00510 Cytochrome c oxidase subunit III BF25_759 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BF25_76 PF07883 Cupin domain BF25_760 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BF25_761 PF00795 Carbon-nitrogen hydrolase BF25_762 PF08868 YugN-like family BF25_763 PF14504 CAP-associated N-terminal BF25_763 PF00188 Cysteine-rich secretory protein family BF25_764 PF14071 Putative coat protein BF25_765 PF14003 YlbE-like protein BF25_766 PF00300 Histidine phosphatase superfamily (branch 1) BF25_767 PF06133 Control of competence regulator ComK, YlbF/YmcA BF25_768 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BF25_77 PF12746 GNAT acetyltransferase BF25_772 PF07670 Nucleoside recognition BF25_773 PF01467 Cytidylyltransferase-like BF25_774 PF01734 Patatin-like phospholipase BF25_775 PF05362 Lon protease (S16) C-terminal proteolytic domain BF25_775 PF13180 PDZ domain BF25_776 PF05636 HIGH Nucleotidyl Transferase BF25_777 PF14659 Phage integrase, N-terminal SAM-like domain BF25_777 PF00589 Phage integrase family BF25_781 PF01381 Helix-turn-helix BF25_785 PF01381 Helix-turn-helix BF25_791 PF07319 Primosomal protein DnaI N-terminus BF25_791 PF01695 IstB-like ATP binding protein BF25_796 PF04545 Sigma-70, region 4 BF25_796 PF04539 Sigma-70 region 3 BF25_796 PF04542 Sigma-70 region 2 BF25_8 PF08245 Mur ligase middle domain BF25_8 PF01225 Mur ligase family, catalytic domain BF25_8 PF02875 Mur ligase family, glutamate ligase domain BF25_801 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF25_811 PF00589 Phage integrase family BF25_812 PF10137 Predicted nucleotide-binding protein containing TIR-like domain BF25_816 PF03354 Phage Terminase BF25_818 PF00574 Clp protease BF25_83 PF11518 Protein of unknown function (DUF3221) BF25_836 PF05105 Bacteriophage holin family BF25_837 PF01510 N-acetylmuramoyl-L-alanine amidase BF25_837 PF12123 N-acetylmuramoyl-l-alanine amidase BF25_84 PF00557 Metallopeptidase family M24 BF25_84 PF01321 Creatinase/Prolidase N-terminal domain BF25_846 PF02620 Large ribosomal RNA subunit accumulation protein YceD BF25_847 PF01783 Ribosomal L32p protein family BF25_849 PF00583 Acetyltransferase (GNAT) family BF25_850 PF08546 Ketopantoate reductase PanE/ApbA C terminal BF25_850 PF02558 Ketopantoate reductase PanE/ApbA BF25_851 PF10079 Bacillithiol biosynthesis BshC BF25_852 PF01795 MraW methylase family BF25_853 PF04977 Septum formation initiator BF25_855 PF00905 Penicillin binding protein transpeptidase domain BF25_855 PF03717 Penicillin-binding Protein dimerisation domain BF25_855 PF03793 PASTA domain BF25_856 PF01225 Mur ligase family, catalytic domain BF25_856 PF02875 Mur ligase family, glutamate ligase domain BF25_856 PF08245 Mur ligase middle domain BF25_857 PF00953 Glycosyl transferase family 4 BF25_857 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BF25_858 PF08245 Mur ligase middle domain BF25_858 PF02875 Mur ligase family, glutamate ligase domain BF25_859 PF01098 Cell cycle protein BF25_860 PF04101 Glycosyltransferase family 28 C-terminal domain BF25_860 PF03033 Glycosyltransferase family 28 N-terminal domain BF25_861 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BF25_861 PF01565 FAD binding domain BF25_862 PF08478 POTRA domain, FtsQ-type BF25_862 PF03799 Cell division protein FtsQ BF25_863 PF02491 SHS2 domain inserted in FTSA BF25_864 PF12327 FtsZ family, C-terminal domain BF25_864 PF00091 Tubulin/FtsZ family, GTPase domain BF25_865 PF03419 Sporulation factor SpoIIGA BF25_866 PF04545 Sigma-70, region 4 BF25_866 PF04542 Sigma-70 region 2 BF25_867 PF04545 Sigma-70, region 4 BF25_867 PF04539 Sigma-70 region 3 BF25_867 PF04542 Sigma-70 region 2 BF25_868 PF05239 PRC-barrel domain BF25_87 PF07085 DRTGG domain BF25_87 PF00392 Bacterial regulatory proteins, gntR family BF25_87 PF03061 Thioesterase superfamily BF25_87 PF00571 CBS domain BF25_870 PF01168 Alanine racemase, N-terminal domain BF25_871 PF04472 Cell division protein SepF BF25_872 PF02325 YGGT family BF25_873 PF17774 Putative RNA-binding domain in YlmH BF25_873 PF01479 S4 domain BF25_874 PF05103 DivIVA protein BF25_875 PF06827 Zinc finger found in FPG and IleRS BF25_875 PF00133 tRNA synthetases class I (I, L, M and V) BF25_875 PF08264 Anticodon-binding domain of tRNA BF25_877 PF01252 Signal peptidase (SPase) II BF25_878 PF01479 S4 domain BF25_878 PF00849 RNA pseudouridylate synthase BF25_879 PF00156 Phosphoribosyl transferase domain BF25_880 PF00860 Permease family BF25_881 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BF25_881 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BF25_882 PF01979 Amidohydrolase family BF25_883 PF00117 Glutamine amidotransferase class-I BF25_883 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BF25_884 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BF25_884 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF25_884 PF02142 MGS-like domain BF25_885 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BF25_885 PF00175 Oxidoreductase NAD-binding domain BF25_886 PF01180 Dihydroorotate dehydrogenase BF25_887 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BF25_888 PF00156 Phosphoribosyl transferase domain BF25_894 PF00557 Metallopeptidase family M24 BF25_894 PF01321 Creatinase/Prolidase N-terminal domain BF25_896 PF00690 Cation transporter/ATPase, N-terminus BF25_896 PF00689 Cation transporting ATPase, C-terminus BF25_897 PF03755 YicC-like family, N-terminal region BF25_897 PF08340 Domain of unknown function (DUF1732) BF25_898 PF04025 Domain of unknown function (DUF370) BF25_899 PF00625 Guanylate kinase BF25_9 PF13302 Acetyltransferase (GNAT) domain BF25_90 PF14007 YtpI-like protein BF25_900 PF01192 RNA polymerase Rpb6 BF25_901 PF02441 Flavoprotein BF25_901 PF04127 DNA / pantothenate metabolism flavoprotein BF25_902 PF18074 Primosomal protein N C-terminal domain BF25_902 PF04851 Type III restriction enzyme, res subunit BF25_902 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BF25_902 PF00271 Helicase conserved C-terminal domain BF25_902 PF17764 3′ DNA-binding domain (3′BD) BF25_903 PF01327 Polypeptide deformylase BF25_904 PF02911 Formyl transferase, C-terminal domain BF25_904 PF00551 Formyl transferase BF25_905 PF01189 16S rRNA methyltransferase RsmB/F BF25_905 PF01029 NusB family BF25_906 PF04055 Radical SAM superfamily BF25_908 PF00069 Protein kinase domain BF25_908 PF03793 PASTA domain BF25_909 PF03193 RsgA GTPase BF25_909 PF16745 RsgA N-terminal domain BF25_91 PF01368 DHH family BF25_91 PF02272 DHHA1 domain BF25_910 PF00834 Ribulose-phosphate 3 epimerase family BF25_911 PF04263 Thiamin pyrophosphokinase, catalytic domain BF25_911 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BF25_912 PF00830 Ribosomal L28 family BF25_913 PF03780 Asp23 family, cell envelope-related function BF25_914 PF13684 Dihydroxyacetone kinase family BF25_914 PF02734 DAK2 domain BF25_915 PF00270 DEAD/DEAH box helicase BF25_915 PF00271 Helicase conserved C-terminal domain BF25_915 PF17191 RecG wedge domain BF25_916 PF03061 Thioesterase superfamily BF25_917 PF02504 Fatty acid synthesis protein BF25_918 PF00698 Acyl transferase domain BF25_920 PF00550 Phosphopantetheine attachment site BF25_921 PF00035 Double-stranded RNA binding motif BF25_921 PF14622 Ribonuclease-III-like BF25_922 PF06470 SMC proteins Flexible Hinge Domain BF25_922 PF02463 RecF/RecN/SMC N terminal domain BF25_923 PF00448 SRP54-type protein, GTPase domain BF25_923 PF02881 SRP54-type protein, helical bundle domain BF25_924 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BF25_925 PF02881 SRP54-type protein, helical bundle domain BF25_925 PF00448 SRP54-type protein, GTPase domain BF25_925 PF02978 Signal peptide binding domain BF25_926 PF00886 Ribosomal protein S16 BF25_928 PF01782 RimM N-terminal domain BF25_928 PF05239 PRC-barrel domain BF25_929 PF01746 tRNA (Guanine-1)-methyltransferase BF25_93 PF14034 Sporulation protein YtrH BF25_930 PF01245 Ribosomal protein L19 BF25_931 PF10502 Signal peptidase, peptidase S26 BF25_932 PF01926 50S ribosome-binding GTPase BF25_933 PF01351 Ribonuclease HII BF25_934 PF08442 ATP-grasp domain BF25_934 PF00549 CoA-ligase BF25_935 PF02629 CoA binding domain BF25_935 PF00549 CoA-ligase BF25_937 PF01131 DNA topoisomerase BF25_937 PF01751 Toprim domain BF25_937 PF01396 Topoisomerase DNA binding C4 zinc finger BF25_938 PF01134 Glucose inhibited division protein A BF25_939 PF00589 Phage integrase family BF25_939 PF02899 Phage integrase, N-terminal SAM-like domain BF25_94 PF02811 PHP domain BF25_94 PF14579 Helix-hairpin-helix motif BF25_94 PF01336 OB-fold nucleic acid binding domain BF25_94 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF25_94 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF25_940 PF00227 Proteasome subunit BF25_941 PF00004 ATPase family associated with various cellular activities (AAA) BF25_941 PF07724 AAA domain (Cdc48 subfamily) BF25_941 PF10431 C-terminal, D2-small domain, of ClpB protein BF25_942 PF06018 CodY GAF-like domain BF25_942 PF08222 CodY helix-turn-helix domain BF25_943 PF00318 Ribosomal protein S2 BF25_944 PF00889 Elongation factor TS BF25_945 PF00696 Amino acid kinase family BF25_946 PF01765 Ribosome recycling factor BF25_947 PF01255 Putative undecaprenyl diphosphate synthase BF25_949 PF13288 DXP reductoisomerase C-terminal domain BF25_949 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BF25_949 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BF25_95 PF03949 Malic enzyme, NAD binding domain BF25_95 PF00390 Malic enzyme, N-terminal domain BF25_950 PF17820 PDZ domain BF25_950 PF02163 Peptidase family M50 BF25_951 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF25_951 PF03129 Anticodon binding domain BF25_951 PF04073 Aminoacyl-tRNA editing domain BF25_952 PF14579 Helix-hairpin-helix motif BF25_952 PF02811 PHP domain BF25_952 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF25_952 PF00929 Exonuclease BF25_952 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF25_952 PF11490 DNA polymerase III polC-type N-terminus II BF25_952 PF14480 DNA polymerase III polC-type N-terminus I BF25_953 PF17384 RimP C-terminal SH3 domain BF25_953 PF02576 RimP N-terminal domain BF25_954 PF00575 S1 RNA binding domain BF25_954 PF13184 NusA-like KH domain BF25_954 PF08529 NusA N-terminal domain BF25_955 PF04296 Protein of unknown function (DUF448) BF25_956 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BF25_957 PF00009 Elongation factor Tu GTP binding domain BF25_957 PF11987 Translation-initiation factor 2 BF25_957 PF04760 Translation initiation factor IF-2, N-terminal region BF25_958 PF04456 Protein of unknown function (DUF503) BF25_959 PF02033 Ribosome-binding factor A BF25_96 PF00392 Bacterial regulatory proteins, gntR family BF25_960 PF01509 TruB family pseudouridylate synthase (N terminal domain) BF25_960 PF16198 tRNA pseudouridylate synthase B C-terminal domain BF25_961 PF06574 FAD synthetase BF25_961 PF01687 Riboflavin kinase BF25_962 PF00312 Ribosomal protein S15 BF25_963 PF00013 KH domain BF25_963 PF00575 S1 RNA binding domain BF25_963 PF01138 3' exoribonuclease family, domain 1 BF25_963 PF03725 3' exoribonuclease family, domain 2 BF25_963 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BF25_964 PF01522 Polysaccharide deacetylase BF25_965 PF00675 Insulinase (Peptidase family M16) BF25_965 PF05193 Peptidase M16 inactive domain BF25_966 PF05239 PRC-barrel domain BF25_967 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF25_967 PF16924 Dipicolinate synthase subunit A N-terminal domain BF25_968 PF02441 Flavoprotein BF25_969 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF25_969 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF25_97 PF17848 Acetyl-coA carboxylase zinc finger domain BF25_97 PF01039 Carboxyl transferase domain BF25_970 PF00696 Amino acid kinase family BF25_970 PF13840 ACT domain BF25_971 PF00701 Dihydrodipicolinate synthetase family BF25_972 PF00753 Metallo-beta-lactamase superfamily BF25_972 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BF25_972 PF17770 Ribonuclease J C-terminal domain BF25_973 PF00574 Clp protease BF25_974 PF14035 YlzJ-like protein BF25_975 PF17854 FtsK alpha domain BF25_975 PF01580 FtsK/SpoIIIE family BF25_975 PF09397 Ftsk gamma domain BF25_976 PF00392 Bacterial regulatory proteins, gntR family BF25_976 PF07702 UTRA domain BF25_98 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BF25_982 PF05193 Peptidase M16 inactive domain BF25_983 PF05193 Peptidase M16 inactive domain BF25_983 PF00675 Insulinase (Peptidase family M16) BF25_985 PF11588 Protein of unknown function (DUF3243) BF25_986 PF11868 Protein of unknown function (DUF3388) BF25_987 PF13464 Domain of unknown function (DUF4115) BF25_988 PF01066 CDP-alcohol phosphatidyltransferase BF25_989 PF02464 Competence-damaged protein BF25_989 PF18146 Damage-inducible protein CinA KH domain BF25_989 PF00994 Probable molybdopterin binding domain BF25_99 PF00365 Phosphofructokinase BF25_990 PF00154 recA bacterial DNA recombination protein BF25_991 PF00154 recA bacterial DNA recombination protein BF25_992 PF12072 Domain of unknown function (DUF3552) BF25_992 PF00013 KH domain BF25_992 PF01966 HD domain BF25_993 PF13277 YmdB-like protein BF25_994 PF04232 Stage V sporulation protein S (SpoVS) BF25_995 PF01244 Membrane dipeptidase (Peptidase family M19) BF25_996 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BF25_996 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BF25_996 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BF25_997 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF25_998 PF04055 Radical SAM superfamily BF25_998 PF00919 Uncharacterized protein family UPF0004 BF25_998 PF01938 TRAM domain BF25_999 PF06133 Control of competence regulator ComK, YlbF/YmcA