BG01_1004 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_1014 SM00729 Elongator protein 3, MiaB family, Radical SAM BG01_1014 SM00876 Biotin and Thiamin Synthesis associated domain BG01_1020 SM00704 CDGSH-type zinc finger. Function unknown. BG01_1044 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BG01_1048 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_1051 SM00382 ATPases associated with a variety of cellular activities BG01_1052 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_1053 SM00936 Penicillin-binding protein 5, C-terminal domain BG01_1055 SM00387 Histidine kinase-like ATPases BG01_1074 SM00849 Metallo-beta-lactamase superfamily BG01_1077 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_1077 SM00866 BG01_1077 BG01_1079 SM01061 CAT RNA binding domain BG01_1086 SM00267 diguanylate cyclase BG01_1092 SM01007 Class II Aldolase and Adducin N-terminal domain BG01_1109 SM00382 ATPases associated with a variety of cellular activities BG01_111 SM00966 SpoVT / AbrB like domain BG01_1116 SM00382 ATPases associated with a variety of cellular activities BG01_1117 SM00642 Alpha-amylase domain BG01_1118 SM00642 Alpha-amylase domain BG01_1122 SM00354 helix_turn _helix lactose operon repressor BG01_1125 SM00387 Histidine kinase-like ATPases BG01_1125 SM00388 His Kinase A (phosphoacceptor) domain BG01_1134 SM00267 diguanylate cyclase BG01_114 SM00493 BG01_114 BG01_1142 SM00052 Putative diguanylate phosphodiesterase BG01_115 SM00650 Ribosomal RNA adenine dimethylases BG01_1155 SM00849 Metallo-beta-lactamase superfamily BG01_1161 SM00861 Transketolase, pyrimidine binding domain BG01_1177 SM00838 Elongation factor G C-terminus BG01_1182 SM00670 Large family of predicted nucleotide-binding domains BG01_1186 SM00878 Biotin carboxylase C-terminal domain BG01_1199 SM00855 Phosphoglycerate mutase family BG01_1208 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG01_1214 SM00530 Helix-turn-helix XRE-family like proteins BG01_1218 SM00530 Helix-turn-helix XRE-family like proteins BG01_1219 SM00530 Helix-turn-helix XRE-family like proteins BG01_1224 SM00382 ATPases associated with a variety of cellular activities BG01_1238 SM00530 Helix-turn-helix XRE-family like proteins BG01_124 SM01400 BG01_124 BG01_1247 SM00507 HNH nucleases BG01_1269 SM00644 BG01_1269 BG01_127 SM00487 DEAD-like helicases superfamily BG01_127 SM00490 helicase superfamily c-terminal domain BG01_127 SM00982 BG01_127 BG01_127 SM01058 CarD-like/TRCF domain BG01_1272 SM00530 Helix-turn-helix XRE-family like proteins BG01_128 SM00966 SpoVT / AbrB like domain BG01_1280 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BG01_1286 SM00740 BG01_1286 BG01_1287 SM00740 BG01_1287 BG01_1295 SM00842 Cell division protein FtsA BG01_1296 SM00864 Tubulin/FtsZ family, GTPase domain BG01_1296 SM00865 Tubulin/FtsZ family, C-terminal domain BG01_1305 SM00363 S4 RNA-binding domain BG01_131 SM00363 S4 RNA-binding domain BG01_1310 SM00363 S4 RNA-binding domain BG01_1315 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BG01_1316 SM00851 MGS-like domain BG01_1316 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BG01_1316 SM01209 BG01_1316 BG01_1319 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BG01_1328 SM00831 Cation transporter/ATPase, N-terminus BG01_1331 SM00072 Guanylate kinase homologues. BG01_1332 SM01409 BG01_1332 BG01_1334 SM00487 DEAD-like helicases superfamily BG01_1334 SM00490 helicase superfamily c-terminal domain BG01_1339 SM00331 Sigma factor PP2C-like phosphatases BG01_1339 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BG01_1340 SM00220 Serine/Threonine protein kinases, catalytic domain BG01_1340 SM00740 BG01_1340 BG01_1343 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BG01_1346 SM01120 BG01_1346 BG01_1346 SM01121 BG01_1346 BG01_1347 SM00487 DEAD-like helicases superfamily BG01_1347 SM00490 helicase superfamily c-terminal domain BG01_135 SM00316 Ribosomal protein S1-like RNA-binding domain BG01_1350 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BG01_1351 SM00822 BG01_1351 BG01_1353 SM00358 Double-stranded RNA binding motif BG01_1353 SM00535 Ribonuclease III family BG01_1354 SM00968 SMC proteins Flexible Hinge Domain BG01_1355 SM00382 ATPases associated with a variety of cellular activities BG01_1355 SM00962 SRP54-type protein, GTPase domain BG01_1355 SM00963 SRP54-type protein, helical bundle domain BG01_1357 SM00382 ATPases associated with a variety of cellular activities BG01_1357 SM00962 SRP54-type protein, GTPase domain BG01_1357 SM00963 SRP54-type protein, helical bundle domain BG01_1367 SM00881 CoA binding domain BG01_1369 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG01_1369 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG01_1369 SM00493 BG01_1369 BG01_1373 SM00382 ATPases associated with a variety of cellular activities BG01_1373 SM01086 C-terminal, D2-small domain, of ClpB protein BG01_138 SM00331 Sigma factor PP2C-like phosphatases BG01_138 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BG01_1382 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG01_1384 SM00479 BG01_1384 BG01_1384 SM00481 DNA polymerase alpha chain like domain BG01_1386 SM00316 Ribosomal protein S1-like RNA-binding domain BG01_1386 SM00322 K homology RNA-binding domain BG01_139 SM00977 TilS substrate C-terminal domain BG01_1393 SM00904 Riboflavin kinase BG01_1394 SM01387 BG01_1394 BG01_1395 SM00316 Ribosomal protein S1-like RNA-binding domain BG01_1395 SM00322 K homology RNA-binding domain BG01_1401 SM00859 Semialdehyde dehydrogenase, NAD binding domain BG01_1403 SM01130 BG01_1403 BG01_1404 SM00849 Metallo-beta-lactamase superfamily BG01_1407 SM00382 ATPases associated with a variety of cellular activities BG01_1407 SM00843 BG01_1407 BG01_1408 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_1408 SM00866 BG01_1408 BG01_141 SM00382 ATPases associated with a variety of cellular activities BG01_1410 SM00382 ATPases associated with a variety of cellular activities BG01_1421 SM00852 Probable molybdopterin binding domain BG01_1422 SM00382 ATPases associated with a variety of cellular activities BG01_1424 SM00322 K homology RNA-binding domain BG01_1424 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG01_1430 SM00729 Elongator protein 3, MiaB family, Radical SAM BG01_1433 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BG01_1433 SM00534 ATPase domain of DNA mismatch repair MUTS family BG01_1434 SM00853 MutL C terminal dimerisation domain BG01_1434 SM01340 BG01_1434 BG01_1435 SM00382 ATPases associated with a variety of cellular activities BG01_1438 SM00448 cheY-homologous receiver domain BG01_1438 SM00862 Transcriptional regulatory protein, C terminal BG01_1439 SM00387 Histidine kinase-like ATPases BG01_1439 SM00388 His Kinase A (phosphoacceptor) domain BG01_1445 SM00257 Lysin motif BG01_1447 SM00148 Phospholipase C, catalytic domain (part); domain X BG01_1451 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_1456 SM00052 Putative diguanylate phosphodiesterase BG01_1456 SM00091 PAS domain BG01_1456 SM00267 diguanylate cyclase BG01_1463 SM00478 endonuclease III BG01_1465 SM00342 helix_turn_helix, arabinose operon control protein BG01_1471 SM00382 ATPases associated with a variety of cellular activities BG01_1477 SM00411 bacterial (prokaryotic) histone like domain BG01_1481 SM00636 BG01_1481 BG01_1488 SM00420 helix_turn_helix, Deoxyribose operon repressor BG01_1488 SM01134 BG01_1488 BG01_149 SM00905 Dihydroneopterin aldolase BG01_1491 SM00287 Bacterial SH3 domain homologues BG01_1498 SM00382 ATPases associated with a variety of cellular activities BG01_1503 SM00422 helix_turn_helix, mercury resistance BG01_1504 SM01230 BG01_1504 BG01_1509 SM00530 Helix-turn-helix XRE-family like proteins BG01_151 SM00530 Helix-turn-helix XRE-family like proteins BG01_1510 SM00530 Helix-turn-helix XRE-family like proteins BG01_1520 SM00382 ATPases associated with a variety of cellular activities BG01_1535 SM00530 Helix-turn-helix XRE-family like proteins BG01_1566 SM00287 Bacterial SH3 domain homologues BG01_1566 SM00644 BG01_1566 BG01_1572 SM00028 Tetratricopeptide repeats BG01_1578 SM00857 Resolvase, N terminal domain BG01_1582 SM00062 Bacterial periplasmic substrate-binding proteins BG01_1583 SM00382 ATPases associated with a variety of cellular activities BG01_1587 SM00861 Transketolase, pyrimidine binding domain BG01_1590 SM00382 ATPases associated with a variety of cellular activities BG01_1591 SM00382 ATPases associated with a variety of cellular activities BG01_1594 SM00644 BG01_1594 BG01_161 SM00382 ATPases associated with a variety of cellular activities BG01_161 SM01086 C-terminal, D2-small domain, of ClpB protein BG01_162 SM00382 ATPases associated with a variety of cellular activities BG01_1620 SM01058 CarD-like/TRCF domain BG01_1626 SM00091 PAS domain BG01_1626 SM00387 Histidine kinase-like ATPases BG01_1626 SM00388 His Kinase A (phosphoacceptor) domain BG01_1629 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BG01_1630 SM00644 BG01_1630 BG01_1630 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BG01_164 SM00670 Large family of predicted nucleotide-binding domains BG01_1643 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG01_1651 SM00382 ATPases associated with a variety of cellular activities BG01_1654 SM00479 BG01_1654 BG01_1658 SM00257 Lysin motif BG01_1658 SM00636 BG01_1658 BG01_1661 SM01207 BG01_1661 BG01_1664 SM00448 cheY-homologous receiver domain BG01_1664 SM00862 Transcriptional regulatory protein, C terminal BG01_1665 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG01_1666 SM00881 CoA binding domain BG01_1667 SM00387 Histidine kinase-like ATPases BG01_1667 SM00433 TopoisomeraseII BG01_1668 SM00434 DNA Topoisomerase IV BG01_1671 SM00382 ATPases associated with a variety of cellular activities BG01_169 SM00840 BG01_169 BG01_1692 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BG01_1692 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BG01_1696 SM00729 Elongator protein 3, MiaB family, Radical SAM BG01_1699 SM00852 Probable molybdopterin binding domain BG01_170 SM00535 Ribonuclease III family BG01_171 SM00967 RNA 2'-O ribose methyltransferase substrate binding BG01_1727 SM00357 Cold shock protein domain BG01_1728 SM00479 BG01_1728 BG01_173 SM00421 helix_turn_helix, Lux Regulon BG01_1737 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BG01_175 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BG01_1752 SM00028 Tetratricopeptide repeats BG01_1754 SM00829 Enoylreductase BG01_1755 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_176 SM00649 Ribosomal protein L11/L12 BG01_1768 SM00642 Alpha-amylase domain BG01_1770 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BG01_1770 SM00534 ATPase domain of DNA mismatch repair MUTS family BG01_1772 SM00855 Phosphoglycerate mutase family BG01_1773 SM00829 Enoylreductase BG01_1798 SM00829 Enoylreductase BG01_1799 SM00849 Metallo-beta-lactamase superfamily BG01_1812 SM00641 Glycosyl hydrolases family 25 BG01_1813 SM00849 Metallo-beta-lactamase superfamily BG01_1819 SM00382 ATPases associated with a variety of cellular activities BG01_182 SM00663 RNA polymerase I subunit A N-terminus BG01_1823 SM00871 Bacterial transcription activator, effector binding domain BG01_1831 SM00636 BG01_1831 BG01_1832 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_1833 SM00248 ankyrin repeats BG01_1846 SM00849 Metallo-beta-lactamase superfamily BG01_1854 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_1854 SM00866 BG01_1854 BG01_186 SM00838 Elongation factor G C-terminus BG01_186 SM00889 Elongation factor G, domain IV BG01_1860 SM00914 BG01_1860 BG01_1869 SM01276 BG01_1869 BG01_1872 SM00829 Enoylreductase BG01_1875 SM00829 Enoylreductase BG01_1878 SM00861 Transketolase, pyrimidine binding domain BG01_1879 SM01350 BG01_1879 BG01_188 SM01403 BG01_188 BG01_1887 SM00422 helix_turn_helix, mercury resistance BG01_1888 SM01091 Transporter associated domain BG01_1893 SM00028 Tetratricopeptide repeats BG01_1904 SM00382 ATPases associated with a variety of cellular activities BG01_1907 SM01266 BG01_1907 BG01_1919 SM00530 Helix-turn-helix XRE-family like proteins BG01_192 SM01382 BG01_192 BG01_192 SM01383 BG01_192 BG01_1922 SM00382 ATPases associated with a variety of cellular activities BG01_1934 SM01207 BG01_1934 BG01_1935 SM00530 Helix-turn-helix XRE-family like proteins BG01_1944 SM00382 ATPases associated with a variety of cellular activities BG01_195 SM00322 K homology RNA-binding domain BG01_1957 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_1959 SM00382 ATPases associated with a variety of cellular activities BG01_1964 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_1974 SM00287 Bacterial SH3 domain homologues BG01_1977 SM00342 helix_turn_helix, arabinose operon control protein BG01_1989 SM00344 helix_turn_helix ASNC type BG01_199 SM01374 BG01_199 BG01_1997 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_20 SM00448 cheY-homologous receiver domain BG01_20 SM00850 LytTr DNA-binding domain BG01_200 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BG01_2003 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BG01_2008 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG01_2008 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_2008 SM00319 Homologues of the ligand binding domain of Tar BG01_2015 SM00028 Tetratricopeptide repeats BG01_2016 SM00354 helix_turn _helix lactose operon repressor BG01_2035 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_2037 SM00448 cheY-homologous receiver domain BG01_2037 SM00862 Transcriptional regulatory protein, C terminal BG01_2038 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_2038 SM00387 Histidine kinase-like ATPases BG01_2038 SM00388 His Kinase A (phosphoacceptor) domain BG01_2040 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_2042 SM00382 ATPases associated with a variety of cellular activities BG01_2052 SM00530 Helix-turn-helix XRE-family like proteins BG01_2063 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_2063 SM00387 Histidine kinase-like ATPases BG01_2063 SM00388 His Kinase A (phosphoacceptor) domain BG01_2064 SM00448 cheY-homologous receiver domain BG01_2064 SM00862 Transcriptional regulatory protein, C terminal BG01_2071 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_2084 SM00344 helix_turn_helix ASNC type BG01_2088 SM00028 Tetratricopeptide repeats BG01_2091 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_2094 SM00226 Low molecular weight phosphatase family BG01_2099 SM00382 ATPases associated with a variety of cellular activities BG01_21 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG01_21 SM00387 Histidine kinase-like ATPases BG01_212 SM00316 Ribosomal protein S1-like RNA-binding domain BG01_2126 SM01060 BG01_2126 BG01_2137 SM00387 Histidine kinase-like ATPases BG01_2138 SM00448 cheY-homologous receiver domain BG01_2145 SM00919 Malic enzyme, NAD binding domain BG01_2145 SM01274 BG01_2145 BG01_2152 SM00530 Helix-turn-helix XRE-family like proteins BG01_2153 SM00870 BG01_2153 BG01_216 SM00662 RNA polymerases D BG01_2172 SM00849 Metallo-beta-lactamase superfamily BG01_218 SM00382 ATPases associated with a variety of cellular activities BG01_2185 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_2189 SM00346 helix_turn_helix isocitrate lyase regulation BG01_219 SM00382 ATPases associated with a variety of cellular activities BG01_2190 SM00796 Allophanate hydrolase subunit 1 BG01_2191 SM00797 Allophanate hydrolase subunit 2 BG01_2218 SM00448 cheY-homologous receiver domain BG01_2218 SM00862 Transcriptional regulatory protein, C terminal BG01_2219 SM00387 Histidine kinase-like ATPases BG01_2219 SM00388 His Kinase A (phosphoacceptor) domain BG01_2223 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_2228 SM00342 helix_turn_helix, arabinose operon control protein BG01_2228 SM00871 Bacterial transcription activator, effector binding domain BG01_2233 SM00382 ATPases associated with a variety of cellular activities BG01_2235 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_2236 SM00382 ATPases associated with a variety of cellular activities BG01_2241 SM00889 Elongation factor G, domain IV BG01_2242 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_225 SM00646 BG01_225 BG01_2253 SM01060 BG01_2253 BG01_2273 SM00850 LytTr DNA-binding domain BG01_2278 SM00530 Helix-turn-helix XRE-family like proteins BG01_228 SM01251 BG01_228 BG01_2280 SM00098 Alkaline phosphatase homologues BG01_2284 SM00346 helix_turn_helix isocitrate lyase regulation BG01_2287 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BG01_2291 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_2297 SM01133 BG01_2297 BG01_2302 SM00382 ATPases associated with a variety of cellular activities BG01_2313 SM00287 Bacterial SH3 domain homologues BG01_2321 SM00830 Chorismate mutase type II BG01_2331 SM00382 ATPases associated with a variety of cellular activities BG01_2349 SM00028 Tetratricopeptide repeats BG01_2356 SM00382 ATPases associated with a variety of cellular activities BG01_2357 SM00062 Bacterial periplasmic substrate-binding proteins BG01_2368 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_2370 SM00382 ATPases associated with a variety of cellular activities BG01_2409 SM00448 cheY-homologous receiver domain BG01_2409 SM00862 Transcriptional regulatory protein, C terminal BG01_2410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_2410 SM00387 Histidine kinase-like ATPases BG01_2410 SM00388 His Kinase A (phosphoacceptor) domain BG01_2411 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BG01_2419 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG01_2432 SM00091 PAS domain BG01_2432 SM00382 ATPases associated with a variety of cellular activities BG01_2436 SM01130 BG01_2436 BG01_2442 SM01131 BG01_2442 BG01_2449 SM00341 Helicase and RNase D C-terminal BG01_2449 SM00487 DEAD-like helicases superfamily BG01_2449 SM00490 helicase superfamily c-terminal domain BG01_2449 SM00956 BG01_2449 BG01_2464 SM00849 Metallo-beta-lactamase superfamily BG01_2473 SM00060 Fibronectin type 3 domain BG01_2473 SM00495 Chitin-binding domain type 3 BG01_2480 SM00116 Domain in cystathionine beta-synthase and other proteins. BG01_2480 SM00382 ATPases associated with a variety of cellular activities BG01_2491 SM00861 Transketolase, pyrimidine binding domain BG01_2501 SM00420 helix_turn_helix, Deoxyribose operon repressor BG01_2501 SM01134 BG01_2501 BG01_2505 SM00382 ATPases associated with a variety of cellular activities BG01_2529 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_2533 SM00871 Bacterial transcription activator, effector binding domain BG01_2559 SM00465 GIY-YIG type nucleases (URI domain) BG01_258 SM00642 Alpha-amylase domain BG01_2581 SM00480 DNA polymerase III beta subunit BG01_2592 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_2601 SM00422 helix_turn_helix, mercury resistance BG01_2613 SM00740 BG01_2613 BG01_2614 SM00829 Enoylreductase BG01_2617 SM00387 Histidine kinase-like ATPases BG01_2617 SM00388 His Kinase A (phosphoacceptor) domain BG01_2620 SM00382 ATPases associated with a variety of cellular activities BG01_2625 SM00091 PAS domain BG01_2625 SM00387 Histidine kinase-like ATPases BG01_2625 SM00388 His Kinase A (phosphoacceptor) domain BG01_2651 SM01209 BG01_2651 BG01_2652 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_2659 SM00382 ATPases associated with a variety of cellular activities BG01_266 SM00357 Cold shock protein domain BG01_2665 SM00387 Histidine kinase-like ATPases BG01_2667 SM00448 cheY-homologous receiver domain BG01_2667 SM00862 Transcriptional regulatory protein, C terminal BG01_2678 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_2688 SM00422 helix_turn_helix, mercury resistance BG01_2688 SM00871 Bacterial transcription activator, effector binding domain BG01_2693 SM00382 ATPases associated with a variety of cellular activities BG01_2705 SM00448 cheY-homologous receiver domain BG01_2705 SM00862 Transcriptional regulatory protein, C terminal BG01_2706 SM00387 Histidine kinase-like ATPases BG01_2706 SM00388 His Kinase A (phosphoacceptor) domain BG01_2718 SM00878 Biotin carboxylase C-terminal domain BG01_2724 SM00382 ATPases associated with a variety of cellular activities BG01_2727 SM00450 Rhodanese Homology Domain BG01_2727 SM00849 Metallo-beta-lactamase superfamily BG01_2729 SM00860 SMI1 / KNR4 family BG01_2731 SM00052 Putative diguanylate phosphodiesterase BG01_2731 SM00091 PAS domain BG01_2731 SM00267 diguanylate cyclase BG01_2733 SM00382 ATPases associated with a variety of cellular activities BG01_2737 SM00646 BG01_2737 BG01_274 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG01_2742 SM00530 Helix-turn-helix XRE-family like proteins BG01_275 SM00448 cheY-homologous receiver domain BG01_275 SM00862 Transcriptional regulatory protein, C terminal BG01_276 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_276 SM00387 Histidine kinase-like ATPases BG01_276 SM00388 His Kinase A (phosphoacceptor) domain BG01_2760 SM00354 helix_turn _helix lactose operon repressor BG01_2761 SM00014 Acid phosphatase homologues BG01_2778 SM00855 Phosphoglycerate mutase family BG01_2779 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_2784 SM00382 ATPases associated with a variety of cellular activities BG01_2790 SM00487 DEAD-like helicases superfamily BG01_2790 SM00490 helicase superfamily c-terminal domain BG01_2793 SM00849 Metallo-beta-lactamase superfamily BG01_2797 SM01207 BG01_2797 BG01_2814 SM00530 Helix-turn-helix XRE-family like proteins BG01_2816 SM00646 BG01_2816 BG01_2818 SM00382 ATPases associated with a variety of cellular activities BG01_2819 SM00382 ATPases associated with a variety of cellular activities BG01_2826 SM00859 Semialdehyde dehydrogenase, NAD binding domain BG01_2839 SM00357 Cold shock protein domain BG01_284 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_284 SM00866 BG01_284 BG01_2847 SM00530 Helix-turn-helix XRE-family like proteins BG01_2852 SM01059 Chloramphenicol acetyltransferase BG01_2856 SM00849 Metallo-beta-lactamase superfamily BG01_2862 SM00849 Metallo-beta-lactamase superfamily BG01_2875 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG01_2876 SM00363 S4 RNA-binding domain BG01_2884 SM00411 bacterial (prokaryotic) histone like domain BG01_2888 SM00923 MbtH-like protein BG01_2889 SM00823 Phosphopantetheine attachment site BG01_2889 SM00824 Thioesterase BG01_289 SM00382 ATPases associated with a variety of cellular activities BG01_2896 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_2925 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BG01_2936 SM00530 Helix-turn-helix XRE-family like proteins BG01_294 SM00387 Histidine kinase-like ATPases BG01_2941 SM00860 SMI1 / KNR4 family BG01_2943 SM00014 Acid phosphatase homologues BG01_2946 SM00219 Tyrosine kinase, catalytic domain BG01_295 SM00448 cheY-homologous receiver domain BG01_295 SM00862 Transcriptional regulatory protein, C terminal BG01_2954 SM00382 ATPases associated with a variety of cellular activities BG01_2957 SM00882 Coenzyme A transferase BG01_2958 SM00882 Coenzyme A transferase BG01_296 SM00342 helix_turn_helix, arabinose operon control protein BG01_296 SM00871 Bacterial transcription activator, effector binding domain BG01_2961 SM00387 Histidine kinase-like ATPases BG01_2961 SM00388 His Kinase A (phosphoacceptor) domain BG01_2964 SM01091 Transporter associated domain BG01_297 SM00382 ATPases associated with a variety of cellular activities BG01_2972 SM00382 ATPases associated with a variety of cellular activities BG01_2986 SM00829 Enoylreductase BG01_2989 SM00421 helix_turn_helix, Lux Regulon BG01_2989 SM00448 cheY-homologous receiver domain BG01_2990 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG01_3 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG01_3012 SM00563 Phosphate acyltransferases BG01_3024 SM00382 ATPases associated with a variety of cellular activities BG01_3041 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_3041 SM00387 Histidine kinase-like ATPases BG01_3041 SM00388 His Kinase A (phosphoacceptor) domain BG01_3042 SM00448 cheY-homologous receiver domain BG01_3042 SM00862 Transcriptional regulatory protein, C terminal BG01_3053 SM00857 Resolvase, N terminal domain BG01_3060 SM00028 Tetratricopeptide repeats BG01_3063 SM00382 ATPases associated with a variety of cellular activities BG01_3066 SM00327 von Willebrand factor (vWF) type A domain BG01_307 SM00046 Diacylglycerol kinase catalytic domain (presumed) BG01_3072 SM00028 Tetratricopeptide repeats BG01_3073 SM00028 Tetratricopeptide repeats BG01_3077 SM00836 DALR anticodon binding domain BG01_3077 SM01016 Arginyl tRNA synthetase N terminal dom BG01_3081 SM00567 E-Z type HEAT repeats BG01_3081 SM00932 Scaffold protein Nfu/NifU N terminal BG01_3088 SM00382 ATPases associated with a variety of cellular activities BG01_3089 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG01_3100 SM00894 Excalibur calcium-binding domain BG01_3113 SM00852 Probable molybdopterin binding domain BG01_3115 SM00729 Elongator protein 3, MiaB family, Radical SAM BG01_3116 SM00100 Cyclic nucleotide-monophosphate binding domain BG01_3116 SM00419 helix_turn_helix, cAMP Regulatory protein BG01_3118 SM00382 ATPases associated with a variety of cellular activities BG01_3119 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_3123 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BG01_3128 SM00460 Transglutaminase/protease-like homologues BG01_313 SM00448 cheY-homologous receiver domain BG01_313 SM00862 Transcriptional regulatory protein, C terminal BG01_3131 SM00849 Metallo-beta-lactamase superfamily BG01_3135 SM00829 Enoylreductase BG01_3139 SM00487 DEAD-like helicases superfamily BG01_3139 SM00490 helicase superfamily c-terminal domain BG01_314 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_314 SM00387 Histidine kinase-like ATPases BG01_314 SM00388 His Kinase A (phosphoacceptor) domain BG01_316 SM00899 BG01_316 BG01_3162 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_3168 SM01005 Alanine racemase, C-terminal domain BG01_3171 SM00855 Phosphoglycerate mutase family BG01_3172 SM00244 prohibitin homologues BG01_3186 SM01091 Transporter associated domain BG01_3191 SM00155 Phospholipase D. Active site motifs. BG01_32 SM00487 DEAD-like helicases superfamily BG01_32 SM00490 helicase superfamily c-terminal domain BG01_3201 SM00855 Phosphoglycerate mutase family BG01_3222 SM00833 Cobalamin synthesis protein cobW C-terminal domain BG01_3234 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG01_3234 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_3241 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_3243 SM00966 SpoVT / AbrB like domain BG01_3249 SM00460 Transglutaminase/protease-like homologues BG01_3269 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_3269 SM00387 Histidine kinase-like ATPases BG01_3269 SM00388 His Kinase A (phosphoacceptor) domain BG01_3270 SM00448 cheY-homologous receiver domain BG01_3270 SM00862 Transcriptional regulatory protein, C terminal BG01_328 SM00894 Excalibur calcium-binding domain BG01_3285 SM00387 Histidine kinase-like ATPases BG01_3285 SM00388 His Kinase A (phosphoacceptor) domain BG01_3286 SM00448 cheY-homologous receiver domain BG01_3286 SM00862 Transcriptional regulatory protein, C terminal BG01_3287 SM00382 ATPases associated with a variety of cellular activities BG01_3290 SM00287 Bacterial SH3 domain homologues BG01_3296 SM00382 ATPases associated with a variety of cellular activities BG01_3297 SM00382 ATPases associated with a variety of cellular activities BG01_3301 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_3308 SM00382 ATPases associated with a variety of cellular activities BG01_3309 SM00382 ATPases associated with a variety of cellular activities BG01_3316 SM00833 Cobalamin synthesis protein cobW C-terminal domain BG01_332 SM01234 BG01_332 BG01_333 SM00947 Carbonic anhydrase BG01_3336 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG01_3336 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG01_3336 SM00493 BG01_3336 BG01_3338 SM00287 Bacterial SH3 domain homologues BG01_3340 SM01011 Aminopeptidase P, N-terminal domain BG01_3346 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BG01_3348 SM01133 BG01_3348 BG01_3359 SM00450 Rhodanese Homology Domain BG01_3362 SM00387 Histidine kinase-like ATPases BG01_3362 SM00388 His Kinase A (phosphoacceptor) domain BG01_3363 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_3364 SM00448 cheY-homologous receiver domain BG01_3364 SM00862 Transcriptional regulatory protein, C terminal BG01_3366 SM00729 Elongator protein 3, MiaB family, Radical SAM BG01_3378 SM00850 LytTr DNA-binding domain BG01_3384 SM00854 Bacterial capsule synthesis protein PGA_cap BG01_34 SM01240 BG01_34 BG01_3421 SM00047 Lysozyme subfamily 2 BG01_3422 SM00646 BG01_3422 BG01_3434 SM00487 DEAD-like helicases superfamily BG01_3434 SM00490 helicase superfamily c-terminal domain BG01_3435 SM00448 cheY-homologous receiver domain BG01_3436 SM00387 Histidine kinase-like ATPases BG01_3437 SM00919 Malic enzyme, NAD binding domain BG01_3437 SM01274 BG01_3437 BG01_3441 SM00155 Phospholipase D. Active site motifs. BG01_3444 SM00382 ATPases associated with a variety of cellular activities BG01_3446 SM00421 helix_turn_helix, Lux Regulon BG01_3446 SM00448 cheY-homologous receiver domain BG01_345 SM00382 ATPases associated with a variety of cellular activities BG01_3455 SM00530 Helix-turn-helix XRE-family like proteins BG01_3473 SM00833 Cobalamin synthesis protein cobW C-terminal domain BG01_3475 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_3475 SM00895 BG01_3475 BG01_3488 SM00855 Phosphoglycerate mutase family BG01_3491 SM00835 Cupin BG01_3495 SM00849 Metallo-beta-lactamase superfamily BG01_3495 SM01027 Beta-Casp domain BG01_3498 SM00382 ATPases associated with a variety of cellular activities BG01_3502 SM00530 Helix-turn-helix XRE-family like proteins BG01_3513 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG01_352 SM00387 Histidine kinase-like ATPases BG01_352 SM00388 His Kinase A (phosphoacceptor) domain BG01_353 SM00387 Histidine kinase-like ATPases BG01_3531 SM00028 Tetratricopeptide repeats BG01_3534 SM00028 Tetratricopeptide repeats BG01_3540 SM00260 Two component signalling adaptor domain BG01_3540 SM00448 cheY-homologous receiver domain BG01_3549 SM00382 ATPases associated with a variety of cellular activities BG01_3566 SM00138 Methyltransferase, chemotaxis proteins BG01_3570 SM00260 Two component signalling adaptor domain BG01_3570 SM00387 Histidine kinase-like ATPases BG01_3570 SM01231 BG01_3570 BG01_3571 SM00073 Histidine Phosphotransfer domain BG01_3572 SM00448 cheY-homologous receiver domain BG01_3592 SM00849 Metallo-beta-lactamase superfamily BG01_3602 SM00357 Cold shock protein domain BG01_3627 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BG01_3627 SM00475 5'-3' exonuclease BG01_3633 SM00450 Rhodanese Homology Domain BG01_364 SM00852 Probable molybdopterin binding domain BG01_3646 SM00491 BG01_3646 BG01_3648 SM00981 BG01_3648 BG01_3659 SM00060 Fibronectin type 3 domain BG01_3661 SM00478 endonuclease III BG01_3661 SM00525 BG01_3661 BG01_3666 SM00479 BG01_3666 BG01_3666 SM00487 DEAD-like helicases superfamily BG01_3666 SM00491 BG01_3666 BG01_367 SM00014 Acid phosphatase homologues BG01_3675 SM00851 MGS-like domain BG01_3679 SM00986 Uracil DNA glycosylase superfamily BG01_3679 SM00987 UreE urease accessory protein, C-terminal domain BG01_3688 SM00914 BG01_3688 BG01_3689 SM00028 Tetratricopeptide repeats BG01_3693 SM00562 BG01_3693 BG01_3698 SM00411 bacterial (prokaryotic) histone like domain BG01_3709 SM01240 BG01_3709 BG01_3710 SM00316 Ribosomal protein S1-like RNA-binding domain BG01_3713 SM00870 BG01_3713 BG01_3715 SM00644 BG01_3715 BG01_3718 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG01_3720 SM00422 helix_turn_helix, mercury resistance BG01_3722 SM00257 Lysin motif BG01_3724 SM00487 DEAD-like helicases superfamily BG01_3724 SM00490 helicase superfamily c-terminal domain BG01_3729 SM00257 Lysin motif BG01_3731 SM00091 PAS domain BG01_3731 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_3731 SM00387 Histidine kinase-like ATPases BG01_3731 SM00388 His Kinase A (phosphoacceptor) domain BG01_3732 SM00448 cheY-homologous receiver domain BG01_3732 SM00862 Transcriptional regulatory protein, C terminal BG01_3736 SM00363 S4 RNA-binding domain BG01_3747 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_3747 SM00387 Histidine kinase-like ATPases BG01_3747 SM00388 His Kinase A (phosphoacceptor) domain BG01_375 SM00382 ATPases associated with a variety of cellular activities BG01_3751 SM00091 PAS domain BG01_3751 SM00387 Histidine kinase-like ATPases BG01_3751 SM00388 His Kinase A (phosphoacceptor) domain BG01_3769 SM00421 helix_turn_helix, Lux Regulon BG01_3769 SM00448 cheY-homologous receiver domain BG01_377 SM00729 Elongator protein 3, MiaB family, Radical SAM BG01_3770 SM00387 Histidine kinase-like ATPases BG01_3806 SM01329 BG01_3806 BG01_3807 SM00917 LeuA allosteric (dimerisation) domain BG01_381 SM00382 ATPases associated with a variety of cellular activities BG01_3821 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_3845 SM00344 helix_turn_helix ASNC type BG01_3849 SM00382 ATPases associated with a variety of cellular activities BG01_3851 SM00382 ATPases associated with a variety of cellular activities BG01_3852 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_3855 SM00465 GIY-YIG type nucleases (URI domain) BG01_3855 SM00496 Intron-encoded nuclease repeat 2 BG01_3869 SM00387 Histidine kinase-like ATPases BG01_3869 SM00388 His Kinase A (phosphoacceptor) domain BG01_3873 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_3874 SM00387 Histidine kinase-like ATPases BG01_3874 SM00388 His Kinase A (phosphoacceptor) domain BG01_3880 SM00365 Leucine-rich repeat, SDS22-like subfamily BG01_3880 SM00369 Leucine-rich repeats, typical (most populated) subfamily BG01_3884 SM00420 helix_turn_helix, Deoxyribose operon repressor BG01_3884 SM01134 BG01_3884 BG01_3899 SM00822 BG01_3899 BG01_39 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG01_3913 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_3913 SM00895 BG01_3913 BG01_3914 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_3914 SM00387 Histidine kinase-like ATPases BG01_3914 SM00388 His Kinase A (phosphoacceptor) domain BG01_3915 SM00448 cheY-homologous receiver domain BG01_3915 SM00862 Transcriptional regulatory protein, C terminal BG01_3925 SM00014 Acid phosphatase homologues BG01_3929 SM00382 ATPases associated with a variety of cellular activities BG01_3932 SM00530 Helix-turn-helix XRE-family like proteins BG01_3950 SM00530 Helix-turn-helix XRE-family like proteins BG01_3951 SM00861 Transketolase, pyrimidine binding domain BG01_397 SM00450 Rhodanese Homology Domain BG01_3973 SM00635 Bacterial Ig-like domain 2 BG01_40 SM00849 Metallo-beta-lactamase superfamily BG01_4005 SM00954 Region found in RelA / SpoT proteins BG01_4007 SM01118 BG01_4007 BG01_401 SM00729 Elongator protein 3, MiaB family, Radical SAM BG01_4013 SM00155 Phospholipase D. Active site motifs. BG01_4020 SM00382 ATPases associated with a variety of cellular activities BG01_4021 SM00382 ATPases associated with a variety of cellular activities BG01_4029 SM00825 Beta-ketoacyl synthase BG01_4035 SM00382 ATPases associated with a variety of cellular activities BG01_4035 SM01086 C-terminal, D2-small domain, of ClpB protein BG01_404 SM00852 Probable molybdopterin binding domain BG01_4047 SM00530 Helix-turn-helix XRE-family like proteins BG01_4048 SM00642 Alpha-amylase domain BG01_4050 SM01060 BG01_4050 BG01_4072 SM00357 Cold shock protein domain BG01_4080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG01_4080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_4086 SM00448 cheY-homologous receiver domain BG01_4086 SM00862 Transcriptional regulatory protein, C terminal BG01_4087 SM00387 Histidine kinase-like ATPases BG01_4087 SM00388 His Kinase A (phosphoacceptor) domain BG01_4090 SM00342 helix_turn_helix, arabinose operon control protein BG01_4090 SM00871 Bacterial transcription activator, effector binding domain BG01_4093 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG01_4105 SM00725 NEAr Transporter domain BG01_411 SM01058 CarD-like/TRCF domain BG01_4110 SM00849 Metallo-beta-lactamase superfamily BG01_4112 SM00354 helix_turn _helix lactose operon repressor BG01_4133 SM00422 helix_turn_helix, mercury resistance BG01_4148 SM00382 ATPases associated with a variety of cellular activities BG01_4151 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_416 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_4160 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_4170 SM00530 Helix-turn-helix XRE-family like proteins BG01_4175 SM00028 Tetratricopeptide repeats BG01_4180 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG01_4188 SM00829 Enoylreductase BG01_4195 SM00387 Histidine kinase-like ATPases BG01_4195 SM00388 His Kinase A (phosphoacceptor) domain BG01_4195 SM00448 cheY-homologous receiver domain BG01_4196 SM00138 Methyltransferase, chemotaxis proteins BG01_4197 SM00331 Sigma factor PP2C-like phosphatases BG01_4197 SM00448 cheY-homologous receiver domain BG01_420 SM00363 S4 RNA-binding domain BG01_4209 SM00460 Transglutaminase/protease-like homologues BG01_421 SM00420 helix_turn_helix, Deoxyribose operon repressor BG01_4214 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG01_4221 SM01120 BG01_4221 BG01_4228 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_425 SM00642 Alpha-amylase domain BG01_4253 SM00422 helix_turn_helix, mercury resistance BG01_4259 SM00448 cheY-homologous receiver domain BG01_4260 SM00091 PAS domain BG01_4260 SM00387 Histidine kinase-like ATPases BG01_4262 SM00860 SMI1 / KNR4 family BG01_4263 SM00860 SMI1 / KNR4 family BG01_4267 SM00382 ATPases associated with a variety of cellular activities BG01_4282 SM00646 BG01_4282 BG01_429 SM00849 Metallo-beta-lactamase superfamily BG01_4293 SM00635 Bacterial Ig-like domain 2 BG01_4296 SM00957 SecA DEAD-like domain BG01_4296 SM00958 SecA preprotein cross-linking domain BG01_43 SM00091 PAS domain BG01_43 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_43 SM00387 Histidine kinase-like ATPases BG01_43 SM00388 His Kinase A (phosphoacceptor) domain BG01_4303 SM00729 Elongator protein 3, MiaB family, Radical SAM BG01_4305 SM00644 BG01_4305 BG01_4320 SM00382 ATPases associated with a variety of cellular activities BG01_4322 SM00062 Bacterial periplasmic substrate-binding proteins BG01_4322 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG01_4323 SM00382 ATPases associated with a variety of cellular activities BG01_4325 SM00382 ATPases associated with a variety of cellular activities BG01_4331 SM01060 BG01_4331 BG01_4344 SM00344 helix_turn_helix ASNC type BG01_4363 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BG01_437 SM00843 BG01_437 BG01_4374 SM00382 ATPases associated with a variety of cellular activities BG01_4376 SM00287 Bacterial SH3 domain homologues BG01_4386 SM00829 Enoylreductase BG01_4391 SM00450 Rhodanese Homology Domain BG01_4395 SM00450 Rhodanese Homology Domain BG01_4395 SM00849 Metallo-beta-lactamase superfamily BG01_4396 SM00450 Rhodanese Homology Domain BG01_4398 SM00450 Rhodanese Homology Domain BG01_44 SM00448 cheY-homologous receiver domain BG01_44 SM00862 Transcriptional regulatory protein, C terminal BG01_4401 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_4415 SM00354 helix_turn _helix lactose operon repressor BG01_4417 SM00640 Glycosyl hydrolases family 32 BG01_4426 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_4443 SM00382 ATPases associated with a variety of cellular activities BG01_4445 SM00287 Bacterial SH3 domain homologues BG01_4448 SM00116 Domain in cystathionine beta-synthase and other proteins. BG01_4478 SM00899 BG01_4478 BG01_448 SM00354 helix_turn _helix lactose operon repressor BG01_4496 SM00530 Helix-turn-helix XRE-family like proteins BG01_4505 SM00530 Helix-turn-helix XRE-family like proteins BG01_4507 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG01_4514 SM00770 Zinc dependent phospholipase C (alpha toxin) BG01_4516 SM00829 Enoylreductase BG01_4523 SM00382 ATPases associated with a variety of cellular activities BG01_4526 SM00354 helix_turn _helix lactose operon repressor BG01_4529 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_4531 SM00382 ATPases associated with a variety of cellular activities BG01_4532 SM00382 ATPases associated with a variety of cellular activities BG01_4540 SM00448 cheY-homologous receiver domain BG01_4540 SM00862 Transcriptional regulatory protein, C terminal BG01_4541 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_4541 SM00387 Histidine kinase-like ATPases BG01_4541 SM00388 His Kinase A (phosphoacceptor) domain BG01_455 SM00248 ankyrin repeats BG01_4551 SM00062 Bacterial periplasmic substrate-binding proteins BG01_4551 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG01_4552 SM00382 ATPases associated with a variety of cellular activities BG01_4559 SM00642 Alpha-amylase domain BG01_456 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_456 SM00387 Histidine kinase-like ATPases BG01_456 SM00388 His Kinase A (phosphoacceptor) domain BG01_4561 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_4561 SM00866 BG01_4561 BG01_4563 SM00052 Putative diguanylate phosphodiesterase BG01_4563 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG01_4563 SM00091 PAS domain BG01_4563 SM00267 diguanylate cyclase BG01_4566 SM00155 Phospholipase D. Active site motifs. BG01_4567 SM00382 ATPases associated with a variety of cellular activities BG01_4568 SM00327 von Willebrand factor (vWF) type A domain BG01_457 SM00448 cheY-homologous receiver domain BG01_457 SM00862 Transcriptional regulatory protein, C terminal BG01_4573 SM00382 ATPases associated with a variety of cellular activities BG01_4579 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_4592 SM00028 Tetratricopeptide repeats BG01_4592 SM00530 Helix-turn-helix XRE-family like proteins BG01_4595 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_4597 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BG01_4597 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BG01_460 SM00116 Domain in cystathionine beta-synthase and other proteins. BG01_4601 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BG01_4601 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BG01_4605 SM00448 cheY-homologous receiver domain BG01_4605 SM00862 Transcriptional regulatory protein, C terminal BG01_4606 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_4606 SM00387 Histidine kinase-like ATPases BG01_4606 SM00388 His Kinase A (phosphoacceptor) domain BG01_4608 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_4611 SM00919 Malic enzyme, NAD binding domain BG01_4611 SM01274 BG01_4611 BG01_4613 SM00448 cheY-homologous receiver domain BG01_4614 SM00387 Histidine kinase-like ATPases BG01_4615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG01_4615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_4618 SM00387 Histidine kinase-like ATPases BG01_4618 SM00388 His Kinase A (phosphoacceptor) domain BG01_4619 SM00448 cheY-homologous receiver domain BG01_4619 SM00862 Transcriptional regulatory protein, C terminal BG01_4624 SM00382 ATPases associated with a variety of cellular activities BG01_4626 SM00248 ankyrin repeats BG01_4632 SM00091 PAS domain BG01_4632 SM00387 Histidine kinase-like ATPases BG01_4633 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG01_4633 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_4634 SM00244 prohibitin homologues BG01_4636 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BG01_4639 SM00364 Leucine-rich repeats, bacterial type BG01_4639 SM00365 Leucine-rich repeat, SDS22-like subfamily BG01_4639 SM00369 Leucine-rich repeats, typical (most populated) subfamily BG01_4639 SM00725 NEAr Transporter domain BG01_4641 SM00763 PrkA AAA domain BG01_4643 SM00052 Putative diguanylate phosphodiesterase BG01_4643 SM00091 PAS domain BG01_4643 SM00267 diguanylate cyclase BG01_4646 SM00567 E-Z type HEAT repeats BG01_466 SM00363 S4 RNA-binding domain BG01_4681 SM00382 ATPases associated with a variety of cellular activities BG01_4685 SM00382 ATPases associated with a variety of cellular activities BG01_469 SM00363 S4 RNA-binding domain BG01_469 SM01390 BG01_469 BG01_4690 SM00478 endonuclease III BG01_4690 SM00525 BG01_4690 BG01_4706 SM00984 UDP binding domain BG01_4717 SM00530 Helix-turn-helix XRE-family like proteins BG01_4721 SM00382 ATPases associated with a variety of cellular activities BG01_4770 SM00382 ATPases associated with a variety of cellular activities BG01_4777 SM00530 Helix-turn-helix XRE-family like proteins BG01_478 SM00981 BG01_478 BG01_4783 SM00478 endonuclease III BG01_4803 SM00226 Low molecular weight phosphatase family BG01_4805 SM00831 Cation transporter/ATPase, N-terminus BG01_4814 SM00946 Prolyl-tRNA synthetase, C-terminal BG01_4819 SM00530 Helix-turn-helix XRE-family like proteins BG01_4825 SM00060 Fibronectin type 3 domain BG01_4825 SM00636 BG01_4825 BG01_4825 SM00637 BG01_4825 BG01_4826 SM00382 ATPases associated with a variety of cellular activities BG01_4827 SM00382 ATPases associated with a variety of cellular activities BG01_4831 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG01_4831 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_4835 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG01_4835 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG01_4835 SM00493 BG01_4835 BG01_4839 SM00642 Alpha-amylase domain BG01_4840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG01_4840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_4841 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG01_4841 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_4842 SM00382 ATPases associated with a variety of cellular activities BG01_4843 SM00062 Bacterial periplasmic substrate-binding proteins BG01_4843 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG01_4864 SM01007 Class II Aldolase and Adducin N-terminal domain BG01_4873 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG01_4886 SM00382 ATPases associated with a variety of cellular activities BG01_4889 SM00046 Diacylglycerol kinase catalytic domain (presumed) BG01_4890 SM00845 GatB domain BG01_4894 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_49 SM00788 Adenylosuccinate synthetase BG01_4901 SM00382 ATPases associated with a variety of cellular activities BG01_4901 SM00930 BG01_4901 BG01_4907 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG01_4907 SM00292 breast cancer carboxy-terminal domain BG01_4907 SM00532 Ligase N family BG01_4911 SM00244 prohibitin homologues BG01_4913 SM01209 BG01_4913 BG01_4913 SM01210 BG01_4913 BG01_4914 SM00798 AICARFT/IMPCHase bienzyme BG01_4914 SM00851 MGS-like domain BG01_4919 SM01211 BG01_4919 BG01_4922 SM00998 Adenylosuccinate lyase C-terminus BG01_4924 SM01001 AIR carboxylase BG01_4929 SM00448 cheY-homologous receiver domain BG01_4929 SM00862 Transcriptional regulatory protein, C terminal BG01_4930 SM00387 Histidine kinase-like ATPases BG01_4930 SM00388 His Kinase A (phosphoacceptor) domain BG01_4931 SM00382 ATPases associated with a variety of cellular activities BG01_4938 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_4938 SM00387 Histidine kinase-like ATPases BG01_4938 SM00388 His Kinase A (phosphoacceptor) domain BG01_4939 SM00448 cheY-homologous receiver domain BG01_4939 SM00862 Transcriptional regulatory protein, C terminal BG01_4943 SM00883 Chaperonin 10 Kd subunit BG01_4946 SM00881 CoA binding domain BG01_4947 SM00382 ATPases associated with a variety of cellular activities BG01_4969 SM00731 SprT homologues. BG01_4970 SM00316 Ribosomal protein S1-like RNA-binding domain BG01_4970 SM00732 Likely ribonuclease with RNase H fold. BG01_4973 SM01005 Alanine racemase, C-terminal domain BG01_4978 SM00487 DEAD-like helicases superfamily BG01_4978 SM00490 helicase superfamily c-terminal domain BG01_4989 SM00382 ATPases associated with a variety of cellular activities BG01_4991 SM00382 ATPases associated with a variety of cellular activities BG01_4997 SM00382 ATPases associated with a variety of cellular activities BG01_5007 SM00354 helix_turn _helix lactose operon repressor BG01_5009 SM00563 Phosphate acyltransferases BG01_5028 SM00342 helix_turn_helix, arabinose operon control protein BG01_5031 SM00382 ATPases associated with a variety of cellular activities BG01_5032 SM00382 ATPases associated with a variety of cellular activities BG01_504 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BG01_504 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BG01_5042 SM00829 Enoylreductase BG01_5044 SM00382 ATPases associated with a variety of cellular activities BG01_5044 SM00930 BG01_5044 BG01_5055 SM01350 BG01_5055 BG01_5059 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_5059 SM00895 BG01_5059 BG01_506 SM00530 Helix-turn-helix XRE-family like proteins BG01_5086 SM00316 Ribosomal protein S1-like RNA-binding domain BG01_5088 SM00344 helix_turn_helix ASNC type BG01_5095 SM01298 BG01_5095 BG01_5096 SM00479 BG01_5096 BG01_5115 SM00871 Bacterial transcription activator, effector binding domain BG01_5125 SM00382 ATPases associated with a variety of cellular activities BG01_5130 SM00860 SMI1 / KNR4 family BG01_5143 SM00420 helix_turn_helix, Deoxyribose operon repressor BG01_5150 SM00422 helix_turn_helix, mercury resistance BG01_5153 SM00855 Phosphoglycerate mutase family BG01_5155 SM00729 Elongator protein 3, MiaB family, Radical SAM BG01_5166 SM00382 ATPases associated with a variety of cellular activities BG01_517 SM00849 Metallo-beta-lactamase superfamily BG01_5170 SM00382 ATPases associated with a variety of cellular activities BG01_5170 SM00930 BG01_5170 BG01_5173 SM00493 BG01_5173 BG01_519 SM00116 Domain in cystathionine beta-synthase and other proteins. BG01_5190 SM00849 Metallo-beta-lactamase superfamily BG01_5199 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG01_5199 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_52 SM00267 diguanylate cyclase BG01_5213 SM00530 Helix-turn-helix XRE-family like proteins BG01_5218 SM00448 cheY-homologous receiver domain BG01_5218 SM00862 Transcriptional regulatory protein, C terminal BG01_5219 SM00387 Histidine kinase-like ATPases BG01_5219 SM00388 His Kinase A (phosphoacceptor) domain BG01_5223 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG01_5223 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_5227 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_5247 SM01276 BG01_5247 BG01_5254 SM00363 S4 RNA-binding domain BG01_5256 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BG01_5257 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG01_526 SM00481 DNA polymerase alpha chain like domain BG01_5267 SM00382 ATPases associated with a variety of cellular activities BG01_527 SM00919 Malic enzyme, NAD binding domain BG01_527 SM01274 BG01_527 BG01_5271 SM00448 cheY-homologous receiver domain BG01_5271 SM00862 Transcriptional regulatory protein, C terminal BG01_5273 SM00316 Ribosomal protein S1-like RNA-binding domain BG01_5273 SM00357 Cold shock protein domain BG01_5273 SM00955 BG01_5273 BG01_528 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_5301 SM01192 BG01_5301 BG01_5301 SM01193 BG01_5301 BG01_5305 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG01_5325 SM00028 Tetratricopeptide repeats BG01_5333 SM00487 DEAD-like helicases superfamily BG01_5333 SM00490 helicase superfamily c-terminal domain BG01_5337 SM00422 helix_turn_helix, mercury resistance BG01_5340 SM00530 Helix-turn-helix XRE-family like proteins BG01_5343 SM00422 helix_turn_helix, mercury resistance BG01_5345 SM00382 ATPases associated with a variety of cellular activities BG01_5347 SM00382 ATPases associated with a variety of cellular activities BG01_5349 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG01_5349 SM00245 tail specific protease BG01_5351 SM00382 ATPases associated with a variety of cellular activities BG01_5353 SM00937 BG01_5353 BG01_5354 SM00957 SecA DEAD-like domain BG01_5354 SM00958 SecA preprotein cross-linking domain BG01_5356 SM00357 Cold shock protein domain BG01_5358 SM00487 DEAD-like helicases superfamily BG01_5358 SM00490 helicase superfamily c-terminal domain BG01_5365 SM00984 UDP binding domain BG01_5368 SM00382 ATPases associated with a variety of cellular activities BG01_5369 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BG01_537 SM01329 BG01_537 BG01_5399 SM00287 Bacterial SH3 domain homologues BG01_5400 SM00287 Bacterial SH3 domain homologues BG01_5407 SM00287 Bacterial SH3 domain homologues BG01_541 SM00448 cheY-homologous receiver domain BG01_541 SM00862 Transcriptional regulatory protein, C terminal BG01_5413 SM00487 DEAD-like helicases superfamily BG01_5413 SM00490 helicase superfamily c-terminal domain BG01_542 SM00091 PAS domain BG01_542 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_542 SM00387 Histidine kinase-like ATPases BG01_542 SM00388 His Kinase A (phosphoacceptor) domain BG01_5422 SM00382 ATPases associated with a variety of cellular activities BG01_5424 SM00530 Helix-turn-helix XRE-family like proteins BG01_5429 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG01_5429 SM00387 Histidine kinase-like ATPases BG01_5429 SM00388 His Kinase A (phosphoacceptor) domain BG01_543 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BG01_543 SM00474 3'-5' exonuclease BG01_543 SM00475 5'-3' exonuclease BG01_543 SM00482 DNA polymerase A domain BG01_5430 SM00448 cheY-homologous receiver domain BG01_5430 SM00862 Transcriptional regulatory protein, C terminal BG01_5435 SM00287 Bacterial SH3 domain homologues BG01_5435 SM00382 ATPases associated with a variety of cellular activities BG01_5437 SM00984 UDP binding domain BG01_544 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BG01_544 SM01232 BG01_544 BG01_5450 SM00382 ATPases associated with a variety of cellular activities BG01_5451 SM00850 LytTr DNA-binding domain BG01_5468 SM00052 Putative diguanylate phosphodiesterase BG01_5468 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG01_5468 SM00091 PAS domain BG01_5468 SM00267 diguanylate cyclase BG01_547 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG01_5472 SM00382 ATPases associated with a variety of cellular activities BG01_5485 SM00226 Low molecular weight phosphatase family BG01_5488 SM00903 Flavin reductase like domain BG01_5495 SM00937 BG01_5495 BG01_5498 SM00357 Cold shock protein domain BG01_5498 SM00382 ATPases associated with a variety of cellular activities BG01_5498 SM00959 Rho termination factor, N-terminal domain BG01_5502 SM00448 cheY-homologous receiver domain BG01_551 SM00382 ATPases associated with a variety of cellular activities BG01_5512 SM00155 Phospholipase D. Active site motifs. BG01_5514 SM00052 Putative diguanylate phosphodiesterase BG01_5514 SM00267 diguanylate cyclase BG01_5517 SM00530 Helix-turn-helix XRE-family like proteins BG01_5518 SM00421 helix_turn_helix, Lux Regulon BG01_5518 SM00448 cheY-homologous receiver domain BG01_5519 SM00387 Histidine kinase-like ATPases BG01_5522 SM00382 ATPases associated with a variety of cellular activities BG01_553 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG01_5532 SM00836 DALR anticodon binding domain BG01_5532 SM01016 Arginyl tRNA synthetase N terminal dom BG01_5540 SM00422 helix_turn_helix, mercury resistance BG01_5546 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG01_5548 SM00382 ATPases associated with a variety of cellular activities BG01_5558 SM00936 Penicillin-binding protein 5, C-terminal domain BG01_5567 SM00986 Uracil DNA glycosylase superfamily BG01_5567 SM00987 UreE urease accessory protein, C-terminal domain BG01_5569 SM00382 ATPases associated with a variety of cellular activities BG01_5571 SM00354 helix_turn _helix lactose operon repressor BG01_5578 SM00100 Cyclic nucleotide-monophosphate binding domain BG01_5580 SM00421 helix_turn_helix, Lux Regulon BG01_5580 SM00448 cheY-homologous receiver domain BG01_5582 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG01_5584 SM00267 diguanylate cyclase BG01_5587 SM00448 cheY-homologous receiver domain BG01_5587 SM00850 LytTr DNA-binding domain BG01_5601 SM00725 NEAr Transporter domain BG01_5606 SM00014 Acid phosphatase homologues BG01_5611 SM00984 UDP binding domain BG01_5633 SM00857 Resolvase, N terminal domain BG01_5638 SM00758 BG01_5638 BG01_5639 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_5659 SM00860 SMI1 / KNR4 family BG01_5669 SM00954 Region found in RelA / SpoT proteins BG01_5675 SM00028 Tetratricopeptide repeats BG01_5678 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_5682 SM00318 Staphylococcal nuclease homologues BG01_5684 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG01_5684 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG01_5684 SM00493 BG01_5684 BG01_5698 SM00507 HNH nucleases BG01_5699 SM00487 DEAD-like helicases superfamily BG01_571 SM00873 B3/4 domain BG01_571 SM00874 tRNA synthetase B5 domain BG01_571 SM00896 Ferredoxin-fold anticodon binding domain BG01_5718 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BG01_5741 SM00530 Helix-turn-helix XRE-family like proteins BG01_5744 SM00843 BG01_5744 BG01_5747 SM00864 Tubulin/FtsZ family, GTPase domain BG01_579 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG01_579 SM00481 DNA polymerase alpha chain like domain BG01_579 SM00483 DNA polymerase X family BG01_580 SM00463 Small MutS-related domain BG01_580 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BG01_580 SM00534 ATPase domain of DNA mismatch repair MUTS family BG01_582 SM00363 S4 RNA-binding domain BG01_5834 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG01_5834 SM00493 BG01_5834 BG01_5835 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG01_584 SM00725 NEAr Transporter domain BG01_585 SM00725 NEAr Transporter domain BG01_586 SM00725 NEAr Transporter domain BG01_5866 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_5870 SM00854 Bacterial capsule synthesis protein PGA_cap BG01_5878 SM00014 Acid phosphatase homologues BG01_589 SM00382 ATPases associated with a variety of cellular activities BG01_5891 SM00646 BG01_5891 BG01_593 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BG01_596 SM00448 cheY-homologous receiver domain BG01_596 SM00862 Transcriptional regulatory protein, C terminal BG01_597 SM00387 Histidine kinase-like ATPases BG01_597 SM00388 His Kinase A (phosphoacceptor) domain BG01_598 SM00382 ATPases associated with a variety of cellular activities BG01_61 SM00470 ParB-like nuclease domain BG01_611 SM00893 Electron transfer flavoprotein domain BG01_612 SM00893 Electron transfer flavoprotein domain BG01_614 SM00465 GIY-YIG type nucleases (URI domain) BG01_625 SM00382 ATPases associated with a variety of cellular activities BG01_63 SM00470 ParB-like nuclease domain BG01_630 SM00530 Helix-turn-helix XRE-family like proteins BG01_634 SM00342 helix_turn_helix, arabinose operon control protein BG01_634 SM00448 cheY-homologous receiver domain BG01_636 SM00382 ATPases associated with a variety of cellular activities BG01_637 SM00382 ATPases associated with a variety of cellular activities BG01_645 SM00421 helix_turn_helix, Lux Regulon BG01_65 SM01228 BG01_65 BG01_652 SM00909 Sporulation and spore germination BG01_664 SM00382 ATPases associated with a variety of cellular activities BG01_664 SM00994 ClpX C4-type zinc finger BG01_664 SM01086 C-terminal, D2-small domain, of ClpB protein BG01_665 SM00382 ATPases associated with a variety of cellular activities BG01_666 SM00382 ATPases associated with a variety of cellular activities BG01_666 SM00464 Found in ATP-dependent protease La (LON) BG01_669 SM00347 helix_turn_helix multiple antibiotic resistance protein BG01_67 SM00393 Putative single-stranded nucleic acids-binding domain BG01_67 SM01245 BG01_67 BG01_674 SM01004 Delta-aminolevulinic acid dehydratase BG01_676 SM00257 Lysin motif BG01_694 SM01317 BG01_694 BG01_696 SM00448 cheY-homologous receiver domain BG01_696 SM00862 Transcriptional regulatory protein, C terminal BG01_698 SM00387 Histidine kinase-like ATPases BG01_699 SM00382 ATPases associated with a variety of cellular activities BG01_709 SM00257 Lysin motif BG01_71 SM00382 ATPases associated with a variety of cellular activities BG01_71 SM00760 Bacterial dnaA protein helix-turn-helix domain BG01_712 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_717 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG01_718 SM00382 ATPases associated with a variety of cellular activities BG01_72 SM00480 DNA polymerase III beta subunit BG01_722 SM01323 BG01_722 BG01_731 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG01_731 SM00954 Region found in RelA / SpoT proteins BG01_738 SM00382 ATPases associated with a variety of cellular activities BG01_742 SM00028 Tetratricopeptide repeats BG01_749 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG01_75 SM00387 Histidine kinase-like ATPases BG01_75 SM00433 TopoisomeraseII BG01_751 SM00732 Likely ribonuclease with RNase H fold. BG01_76 SM00434 DNA Topoisomerase IV BG01_770 SM00382 ATPases associated with a variety of cellular activities BG01_775 SM00530 Helix-turn-helix XRE-family like proteins BG01_785 SM00855 Phosphoglycerate mutase family BG01_790 SM00098 Alkaline phosphatase homologues BG01_792 SM00954 Region found in RelA / SpoT proteins BG01_8 SM00382 ATPases associated with a variety of cellular activities BG01_803 SM01103 BG01_803 BG01_805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG01_809 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG01_818 SM00838 Elongation factor G C-terminus BG01_82 SM00116 Domain in cystathionine beta-synthase and other proteins. BG01_82 SM01240 BG01_82 BG01_820 SM00729 Elongator protein 3, MiaB family, Radical SAM BG01_824 SM00271 DnaJ molecular chaperone homology domain BG01_827 SM00729 Elongator protein 3, MiaB family, Radical SAM BG01_83 SM00936 Penicillin-binding protein 5, C-terminal domain BG01_833 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG01_840 SM00116 Domain in cystathionine beta-synthase and other proteins. BG01_842 SM00400 zinc finger BG01_842 SM00493 BG01_842 BG01_842 SM00766 DNA primase DnaG DnaB-binding BG01_849 SM00487 DEAD-like helicases superfamily BG01_849 SM00490 helicase superfamily c-terminal domain BG01_850 SM00518 AP endonuclease family 2 BG01_853 SM00382 ATPases associated with a variety of cellular activities BG01_866 SM00382 ATPases associated with a variety of cellular activities BG01_874 SM00849 Metallo-beta-lactamase superfamily BG01_876 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG01_881 SM01018 B12 binding domain BG01_892 SM00382 ATPases associated with a variety of cellular activities BG01_899 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BG01_906 SM00487 DEAD-like helicases superfamily BG01_906 SM00490 helicase superfamily c-terminal domain BG01_912 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG01_913 SM00382 ATPases associated with a variety of cellular activities BG01_923 SM00354 helix_turn _helix lactose operon repressor BG01_924 SM00450 Rhodanese Homology Domain BG01_928 SM00529 Helix-turn-helix diphteria tox regulatory element BG01_93 SM00382 ATPases associated with a variety of cellular activities BG01_935 SM00841 Elongation factor P, C-terminal BG01_935 SM01185 BG01_935 BG01_939 SM00382 ATPases associated with a variety of cellular activities BG01_949 SM00878 Biotin carboxylase C-terminal domain BG01_95 SM00493 BG01_95 BG01_956 SM00861 Transketolase, pyrimidine binding domain BG01_957 SM00363 S4 RNA-binding domain BG01_960 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG01_961 SM00448 cheY-homologous receiver domain BG01_966 SM00091 PAS domain BG01_966 SM00382 ATPases associated with a variety of cellular activities BG01_968 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG01_972 SM00861 Transketolase, pyrimidine binding domain BG01_978 SM00062 Bacterial periplasmic substrate-binding proteins BG01_978 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG01_980 SM00382 ATPases associated with a variety of cellular activities BG01_989 SM00849 Metallo-beta-lactamase superfamily BG01_997 SM00859 Semialdehyde dehydrogenase, NAD binding domain