locus-tag	class	description
OM980_00010	COG0592	DNA-directed DNA polymerase activity
OM980_00015	COG2501	S4 domain
OM980_00025	COG0187	DNA topoisomerase II activity
OM980_00030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
OM980_00055	COG0516	GMP reductase activity
OM980_00055	COG0517	IMP dehydrogenase activity
OM980_00060	COG1686	Belongs to the peptidase S11 family
OM980_00090	COG1428	Deoxynucleoside kinase
OM980_00095	COG1428	Deoxynucleoside kinase
OM980_00100	COG1335	isochorismatase
OM980_00105	COG0590	tRNA wobble adenosine to inosine editing
OM980_00115	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
OM980_00160	COG1982	Orn Lys Arg decarboxylase major
OM980_00170	COG0470	DNA polymerase III
OM980_00175	COG1774	PSP1 C-terminal conserved region
OM980_00185	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
OM980_00195	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
OM980_00200	COG2002	toxin-antitoxin pair type II binding
OM980_00205	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OM980_00205	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OM980_00210	COG0084	hydrolase, TatD family'
OM980_00215	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
OM980_00230	COG4466	Protein conserved in bacteria
OM980_00245	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
OM980_00250	COG0251	oxidation-reduction process
OM980_00280	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
OM980_00285	COG2002	toxin-antitoxin pair type II binding
OM980_00290	COG2244	polysaccharide biosynthetic process
OM980_00295	COG3956	TIGRFAM MazG family protein
OM980_00300	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
OM980_00320	COG1098	S1 RNA binding domain
OM980_00335	COG2208	phosphoserine phosphatase activity
OM980_00340	COG0037	tRNA processing
OM980_00345	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
OM980_00350	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OM980_00365	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
OM980_00370	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
OM980_00375	COG0512	Glutamine amidotransferase of anthranilate synthase
OM980_00380	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OM980_00385	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
OM980_00390	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
OM980_00395	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
OM980_00400	COG1396	sequence-specific DNA binding
OM980_00405	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
OM980_00435	COG3880	PFAM UvrB UvrC protein
OM980_00445	COG0542	response to heat
OM980_00450	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
OM980_00460	COG4956	integral membrane protein (PIN domain superfamily)
OM980_00480	COG1045	serine acetyltransferase
OM980_00495	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OM980_00500	COG3688	RNA-binding protein containing a PIN domain
OM980_00515	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
OM980_00520	COG0250	Participates in transcription elongation, termination and antitermination
OM980_00525	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
OM980_00545	COG2813	Specifically methylates the guanine in position
OM980_00555	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
OM980_00560	COG1358	cellular component organization or biogenesis
OM980_00630	COG0255	Belongs to the universal ribosomal protein uL29 family
OM980_00690	COG0201	protein transport
OM980_00700	COG0024	Methionine aminopeptidase
OM980_00710	COG0257	Belongs to the bacterial ribosomal protein bL36 family
OM980_00745	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
OM980_00770	COG0860	N-Acetylmuramoyl-L-alanine amidase
OM980_00775	COG0489	protein tyrosine kinase activity
OM980_00785	COG2194	sulfuric ester hydrolase activity
OM980_00790	COG0726	polysaccharide deacetylase
OM980_00870	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
OM980_00875	COG4856	YbbR-like protein
OM980_00890	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
OM980_00895	COG0596	Alpha beta hydrolase
OM980_00915	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
OM980_00920	COG0823	Involved in the tonB-independent uptake of proteins
OM980_00920	COG1506	peptidase
OM980_00920	COG4946	Tricorn protease homolog
OM980_00955	COG2011	ABC-type metal ion transport system permease component
OM980_00960	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
OM980_00965	COG1464	Belongs to the NlpA lipoprotein family
OM980_00970	COG0604	alcohol dehydrogenase
OM980_00980	COG0277	FAD linked oxidase domain protein
OM980_00985	COG2271	Major facilitator Superfamily
OM980_00995	COG2814	Major facilitator Superfamily
OM980_01010	COG0601	transmembrane transport
OM980_01015	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OM980_01020	COG0444	Belongs to the ABC transporter superfamily
OM980_01025	COG4608	Belongs to the ABC transporter superfamily
OM980_01030	COG4166	transmembrane transport
OM980_01040	COG2207	Transcriptional regulator
OM980_01055	COG4166	transmembrane transport
OM980_01060	COG4166	transmembrane transport
OM980_01065	COG0656	L-ascorbic acid biosynthetic process
OM980_01085	COG4149	molybdate abc transporter
OM980_01095	COG1910	domain protein
OM980_01105	COG0583	DNA-binding transcription factor activity
OM980_01110	COG0697	spore germination
OM980_01125	COG0204	Acyl-transferase
OM980_01135	COG1609	Transcriptional regulator
OM980_01145	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM980_01155	COG0084	hydrolase, TatD family'
OM980_01160	COG5298	Protein conserved in bacteria
OM980_01185	COG0488	(ABC) transporter
OM980_01200	COG0747	negative chemotaxis
OM980_01205	COG0601	transmembrane transport
OM980_01210	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OM980_01215	COG0444	Belongs to the ABC transporter superfamily
OM980_01240	COG3185	4-Hydroxyphenylpyruvate dioxygenase
OM980_01245	COG0179	Fumarylacetoacetate (FAA) hydrolase
OM980_01255	COG2814	Major facilitator Superfamily
OM980_01265	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
OM980_01275	COG4294	response to UV
OM980_01280	COG0457	Tetratricopeptide repeat
OM980_01280	COG0705	Rhomboid family
OM980_01290	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
OM980_01295	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
OM980_01300	COG0864	Transcriptional regulator
OM980_01305	COG2337	Toxic component of a toxin-antitoxin (TA) module
OM980_01310	COG2183	response to ionizing radiation
OM980_01405	COG0802	atpase or kinase
OM980_01410	COG1214	PFAM Peptidase M22, glycoprotease
OM980_01415	COG0456	acetyltransferase
OM980_01425	COG0488	(ABC) transporter
OM980_01440	COG1266	CAAX protease self-immunity
OM980_01460	COG2252	PERMEase
OM980_01470	COG5002	protein histidine kinase activity
OM980_01500	COG2226	methyltransferase
OM980_01545	COG1968	undecaprenyl-diphosphatase activity
OM980_01560	COG2205	protein histidine kinase activity
OM980_01565	COG0745	RESPONSE REGULATOR receiver
OM980_01590	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
OM980_01595	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
OM980_01600	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
OM980_01610	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
OM980_01625	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
OM980_01635	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
OM980_01645	COG0151	Belongs to the GarS family
OM980_01670	COG0210	DNA helicase
OM980_01680	COG4851	CamS sex pheromone cAM373 precursor
OM980_01700	COG1335	isochorismatase
OM980_01705	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
OM980_01710	COG2011	ABC-type metal ion transport system permease component
OM980_01715	COG1464	Belongs to the NlpA lipoprotein family
OM980_01735	COG1846	Transcriptional regulator
OM980_01760	COG1597	lipid kinase activity
OM980_01765	COG0546	phosphoglycolate phosphatase activity
OM980_01770	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
OM980_01780	COG1012	belongs to the aldehyde dehydrogenase family
OM980_01785	COG2076	Multidrug Resistance protein
OM980_01790	COG2309	aminopeptidase activity
OM980_01805	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM980_01810	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
OM980_01815	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
OM980_01825	COG4807	Protein conserved in bacteria
OM980_01850	COG1757	Na H antiporter
OM980_01855	COG1473	amidohydrolase
OM980_01870	COG0450	alkyl hydroperoxide reductase
OM980_01890	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM980_01895	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM980_01900	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM980_01915	COG0166	Belongs to the GPI family
OM980_01950	COG5002	protein histidine kinase activity
OM980_01970	COG3541	Predicted nucleotidyltransferase
OM980_01975	COG2814	Major facilitator Superfamily
OM980_01980	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OM980_01980	COG0723	plastoquinol--plastocyanin reductase activity
OM980_01990	COG0765	amino acid transport
OM980_01995	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OM980_02005	COG0840	transmembrane signaling receptor activity
OM980_02010	COG0840	transmembrane signaling receptor activity
OM980_02015	COG0366	Alpha amylase catalytic
OM980_02020	COG1263	PTS System
OM980_02020	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM980_02020	COG2190	(PTS) system
OM980_02050	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
OM980_02065	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OM980_02075	COG1116	anion transmembrane transporter activity
OM980_02080	COG0488	(ABC) transporter
OM980_02125	COG2270	Major facilitator Superfamily
OM980_02140	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
OM980_02155	COG2310	stress, protein
OM980_02160	COG2310	stress, protein
OM980_02165	COG2310	stress, protein
OM980_02170	COG0861	Integral membrane protein TerC family
OM980_02180	COG3853	Toxic anion resistance protein (TelA)
OM980_02195	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
OM980_02205	COG1295	ribonuclease BN
OM980_02210	COG2217	Heavy metal translocating P-type atpase
OM980_02215	COG0697	spore germination
OM980_02235	COG0586	Pfam SNARE associated Golgi protein
OM980_02250	COG3871	stress protein (general stress protein 26)
OM980_02255	COG0387	Pfam Sodium calcium exchanger
OM980_02265	COG0535	radical SAM domain protein
OM980_02290	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
OM980_02295	COG0582	viral genome integration into host DNA
OM980_02305	COG1396	sequence-specific DNA binding
OM980_02325	COG1396	sequence-specific DNA binding
OM980_02360	COG1484	DNA-dependent DNA replication
OM980_02590	COG0101	tRNA pseudouridine synthase activity
OM980_02600	COG3829	transcription factor binding
OM980_02610	COG0833	amino acid
OM980_02615	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
OM980_02645	COG1263	PTS System
OM980_02645	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM980_02650	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OM980_02665	COG0463	Glycosyl transferase, family 2
OM980_02680	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
OM980_02680	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OM980_02695	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
OM980_02715	COG1228	amidohydrolase
OM980_02720	COG1090	epimerase
OM980_02750	COG1988	membrane-bound metal-dependent
OM980_02755	COG1194	a g-specific adenine glycosylase
OM980_02780	COG1132	(ABC) transporter
OM980_02785	COG4129	membrane
OM980_02790	COG0070	glutamate synthase
OM980_02790	COG0067	glutamate synthase
OM980_02790	COG0069	glutamate synthase activity
OM980_02800	COG4555	ABC transporter
OM980_02820	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
OM980_02825	COG0735	belongs to the Fur family
OM980_02920	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
OM980_02925	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
OM980_02935	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
OM980_02945	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
OM980_02955	COG2766	serine protein kinase
OM980_02975	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OM980_02985	COG1585	Membrane protein implicated in regulation of membrane protease activity
OM980_02990	COG2268	Band 7 protein
OM980_03000	COG3290	protein histidine kinase activity
OM980_03010	COG2851	Citrate transporter
OM980_03030	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
OM980_03035	COG3842	ATPase activity
OM980_03040	COG1175	transmembrane transport
OM980_03045	COG0395	ABC-type sugar transport system, permease component
OM980_03055	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
OM980_03060	COG0745	RESPONSE REGULATOR receiver
OM980_03065	COG5002	protein histidine kinase activity
OM980_03075	COG4990	cell redox homeostasis
OM980_03085	COG3290	protein histidine kinase activity
OM980_03090	COG4565	transcriptional regulatory protein
OM980_03095	COG3493	citrate carrier protein
OM980_03100	COG0281	malic enzyme
OM980_03115	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM980_03125	COG5002	protein histidine kinase activity
OM980_03130	COG0745	RESPONSE REGULATOR receiver
OM980_03140	COG0456	acetyltransferase
OM980_03140	COG0454	-acetyltransferase
OM980_03145	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
OM980_03150	COG3383	formate dehydrogenase (NAD+) activity
OM980_03170	COG0531	amino acid
OM980_03175	COG0640	Transcriptional regulator
OM980_03180	COG2217	Heavy metal translocating P-type atpase
OM980_03185	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
OM980_03200	COG3227	Zinc metalloprotease (Elastase)
OM980_03220	COG2720	vancomycin resistance protein
OM980_03225	COG1316	TRANSCRIPTIONal
OM980_03230	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM980_03235	COG0346	lactoylglutathione lyase activity
OM980_03245	COG1027	Aspartate ammonia-lyase
OM980_03250	COG1620	l-lactate permease
OM980_03265	COG3104	oligopeptide transport
OM980_03270	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM980_03275	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM980_03280	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM980_03290	COG2226	methyltransferase
OM980_03295	COG0156	8-amino-7-oxononanoate synthase activity
OM980_03310	COG4548	von Willebrand factor, type A
OM980_03315	COG0714	Associated with various cellular activities
OM980_03320	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OM980_03340	COG0531	amino acid
OM980_03345	COG2188	Transcriptional regulator
OM980_03350	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM980_03350	COG1263	PTS System
OM980_03355	COG0366	Alpha amylase catalytic
OM980_03370	COG0697	spore germination
OM980_03380	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
OM980_03385	COG1115	amino acid carrier protein
OM980_03390	COG1126	abc transporter atp-binding protein
OM980_03395	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OM980_03400	COG0765	amino acid transport
OM980_03405	COG0765	amino acid transport
OM980_03410	COG0833	amino acid
OM980_03435	COG2378	regulation of single-species biofilm formation
OM980_03440	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
OM980_03445	COG5002	protein histidine kinase activity
OM980_03460	COG0659	secondary active sulfate transmembrane transporter activity
OM980_03475	COG0747	negative chemotaxis
OM980_03485	COG0601	transmembrane transport
OM980_03490	COG4608	Belongs to the ABC transporter superfamily
OM980_03500	COG2271	Major facilitator Superfamily
OM980_03505	COG1846	Transcriptional regulator
OM980_03515	COG1609	Transcriptional regulator
OM980_03520	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OM980_03535	COG1172	Belongs to the binding-protein-dependent transport system permease family
OM980_03540	COG1879	ABC-type sugar transport system periplasmic component
OM980_03565	COG1063	alcohol dehydrogenase
OM980_03580	COG3568	Endonuclease Exonuclease Phosphatase
OM980_03605	COG1968	undecaprenyl-diphosphatase activity
OM980_03610	COG0840	transmembrane signaling receptor activity
OM980_03615	COG3584	3D domain protein
OM980_03615	COG1388	LysM domain
OM980_03620	COG1476	TRANSCRIPTIONal
OM980_03635	COG3104	oligopeptide transport
OM980_03640	COG1114	Component of the transport system for branched-chain amino acids
OM980_03655	COG1113	amino acid transport
OM980_03660	COG2252	PERMEase
OM980_03685	COG0569	domain protein
OM980_03685	COG0475	glutathione-regulated potassium exporter activity
OM980_03700	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
OM980_03705	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
OM980_03710	COG4990	cell redox homeostasis
OM980_03725	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OM980_03730	COG0697	spore germination
OM980_03735	COG0531	amino acid
OM980_03745	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
OM980_03750	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
OM980_03755	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
OM980_03755	COG1918	ferrous iron import across plasma membrane
OM980_03760	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
OM980_03765	COG0573	inorganic phosphate transmembrane transporter activity
OM980_03770	COG0581	inorganic phosphate transmembrane transporter activity
OM980_03780	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OM980_03895	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
OM980_03915	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
OM980_03920	COG1116	anion transmembrane transporter activity
OM980_03925	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OM980_03930	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OM980_03935	COG0352	thiamine-phosphate diphosphorylase activity
OM980_03940	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OM980_03945	COG2104	thiamine diphosphate biosynthetic process
OM980_03955	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OM980_03960	COG0351	phosphomethylpyrimidine kinase
OM980_04000	COG2205	protein histidine kinase activity
OM980_04005	COG2814	Major facilitator Superfamily
OM980_04010	COG1846	Transcriptional regulator
OM980_04025	COG2252	PERMEase
OM980_04030	COG1028	Short-chain dehydrogenase reductase Sdr
OM980_04045	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OM980_04050	COG1621	beta-fructofuranosidase activity
OM980_04055	COG1263	PTS System
OM980_04055	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM980_04060	COG1609	Transcriptional regulator
OM980_04070	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OM980_04075	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
OM980_04110	COG0778	Nitroreductase
OM980_04115	COG2719	SpoVR family
OM980_04140	COG0446	pyridine nucleotide-disulphide oxidoreductase
OM980_04145	COG1937	Protein conserved in bacteria
OM980_04150	COG0425	Belongs to the sulfur carrier protein TusA family
OM980_04150	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OM980_04155	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OM980_04155	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM980_04160	COG0425	Belongs to the sulfur carrier protein TusA family
OM980_04175	COG2210	Belongs to the sulfur carrier protein TusA family
OM980_04180	COG0730	response to heat
OM980_04190	COG1316	TRANSCRIPTIONal
OM980_04195	COG0604	alcohol dehydrogenase
OM980_04200	COG1283	sodium-dependent phosphate transmembrane transporter activity
OM980_04215	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OM980_04215	COG3711	transcriptional antiterminator
OM980_04220	COG1447	Phosphotransferase system cellobiose-specific component IIA
OM980_04225	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
OM980_04245	COG3584	3D domain protein
OM980_04245	COG1388	LysM domain
OM980_04250	COG0577	efflux transmembrane transporter activity
OM980_04255	COG1136	(ABC) transporter
OM980_04265	COG5522	Integral membrane protein (intg_mem_TP0381)
OM980_04280	COG1114	Component of the transport system for branched-chain amino acids
OM980_04285	COG3546	catalase activity
OM980_04320	COG0586	Pfam SNARE associated Golgi protein
OM980_04355	COG0531	amino acid
OM980_04360	COG0475	glutathione-regulated potassium exporter activity
OM980_04370	COG1737	Transcriptional regulator
OM980_04380	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM980_04380	COG1263	PTS System
OM980_04390	COG2259	Doxx family
OM980_04405	COG0697	spore germination
OM980_04410	COG1522	sequence-specific DNA binding
OM980_04425	COG2076	Multidrug Resistance protein
OM980_04430	COG1309	transcriptional regulator
OM980_04435	COG2814	Major facilitator Superfamily
OM980_04440	COG1733	regulation of RNA biosynthetic process
OM980_04450	COG2249	NAD(P)H dehydrogenase (quinone) activity
OM980_04455	COG4533	DNA binding
OM980_04460	COG2211	Major facilitator Superfamily
OM980_04470	COG0693	protein deglycase activity
OM980_04475	COG0753	catalase activity
OM980_04485	COG0531	amino acid
OM980_04490	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
OM980_04500	COG1012	belongs to the aldehyde dehydrogenase family
OM980_04505	COG1132	(ABC) transporter
OM980_04515	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OM980_04520	COG0765	amino acid transport
OM980_04525	COG1126	abc transporter atp-binding protein
OM980_04540	COG0189	ligase activity
OM980_04570	COG0028	Belongs to the TPP enzyme family
OM980_04575	COG3527	Alpha-acetolactate decarboxylase
OM980_04590	COG0561	phosphatase activity
OM980_04605	COG0635	Involved in the biosynthesis of porphyrin-containing compound
OM980_04620	COG0659	secondary active sulfate transmembrane transporter activity
OM980_04640	COG0653	protein targeting
OM980_04645	COG2244	polysaccharide biosynthetic process
OM980_04655	COG0860	N-Acetylmuramoyl-L-alanine amidase
OM980_04660	COG4196	transglutaminase domain protein
OM980_04675	COG1696	Membrane protein involved in D-alanine export
OM980_04690	COG1024	Enoyl-CoA hydratase
OM980_04710	COG1363	Peptidase, m42
OM980_04730	COG3938	Belongs to the proline racemase family
OM980_04770	COG0601	transmembrane transport
OM980_04775	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OM980_04785	COG4608	Belongs to the ABC transporter superfamily
OM980_04820	COG0477	Major facilitator Superfamily
OM980_04825	COG3290	protein histidine kinase activity
OM980_04830	COG4565	transcriptional regulatory protein
OM980_04835	COG3181	Tripartite tricarboxylate transporter family receptor
OM980_04865	COG0789	Transcriptional regulator
OM980_04865	COG4978	Transcriptional regulator
OM980_04880	COG0305	Participates in initiation and elongation during chromosome replication
OM980_04920	COG0477	Major facilitator Superfamily
OM980_04965	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OM980_04965	COG3320	Male sterility
OM980_04970	COG1309	transcriptional regulator
OM980_04990	COG1183	phosphatidylcholine synthase activity
OM980_05010	COG2376	Dihydroxyacetone kinase
OM980_05020	COG2376	Dihydroxyacetone kinase
OM980_05025	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
OM980_05030	COG1959	2 iron, 2 sulfur cluster binding
OM980_05060	COG2770	Histidine kinase
OM980_05060	COG3437	response regulator, receiver
OM980_05110	COG3237	CsbD-like
OM980_05135	COG1191	sigma factor activity
OM980_05145	COG2208	phosphoserine phosphatase activity
OM980_05150	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
OM980_05155	COG0784	Response regulator, receiver
OM980_05155	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OM980_05155	COG2198	Histidine kinase
OM980_05155	COG2205	protein histidine kinase activity
OM980_05210	COG0420	3'-5' exonuclease activity
OM980_05235	COG1309	transcriptional regulator
OM980_05240	COG2814	Major facilitator Superfamily
OM980_05245	COG0346	lactoylglutathione lyase activity
OM980_05250	COG0346	lactoylglutathione lyase activity
OM980_05255	COG0457	Tetratricopeptide repeat
OM980_05265	COG2267	carboxylic ester hydrolase activity
OM980_05285	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
OM980_05290	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
OM980_05300	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
OM980_05340	COG0477	Major facilitator Superfamily
OM980_05345	COG0477	Major facilitator Superfamily
OM980_05355	COG3973	AAA domain
OM980_05360	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OM980_05380	COG4980	gas vesicle protein
OM980_05385	COG0537	adenosine 5'-monophosphoramidase activity
OM980_05390	COG1131	(ABC) transporter
OM980_05395	COG4473	ABC transporter
OM980_05410	COG1309	transcriptional regulator
OM980_05420	COG3402	PFAM membrane-flanked domain
OM980_05465	COG3402	PFAM membrane-flanked domain
OM980_05470	COG3428	Bacterial PH domain
OM980_05475	COG2329	Antibiotic biosynthesis monooxygenase
OM980_05480	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OM980_05485	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
OM980_05490	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
OM980_05495	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
OM980_05530	COG1309	transcriptional regulator
OM980_05535	COG1511	domain protein
OM980_05570	COG1234	tRNA 3'-trailer cleavage
OM980_05575	COG0095	Lipoate-protein ligase
OM980_05585	COG0318	PFAM AMP-dependent synthetase and ligase
OM980_05615	COG3209	COG3209 Rhs family protein
OM980_05655	COG1078	dGTPase activity
OM980_05665	COG1595	DNA-templated transcription, initiation
OM980_05670	COG2207	Transcriptional regulator
OM980_05670	COG3708	Transcriptional regulator
OM980_05685	COG2205	protein histidine kinase activity
OM980_05690	COG0745	RESPONSE REGULATOR receiver
OM980_05715	COG0501	Belongs to the peptidase M48B family
OM980_05720	COG0840	transmembrane signaling receptor activity
OM980_05725	COG0697	spore germination
OM980_05745	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
OM980_05750	COG2224	Isocitrate lyase
OM980_05775	COG4903	ComK protein
OM980_05780	COG0398	Pfam SNARE associated Golgi protein
OM980_05790	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
OM980_05795	COG1074	ATP-dependent DNA helicase activity
OM980_05840	COG0179	Fumarylacetoacetate (FAA) hydrolase
OM980_05865	COG0367	asparagine synthase
OM980_05870	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
OM980_05875	COG0753	catalase activity
OM980_05880	COG0004	ammonium transporteR
OM980_05900	COG2996	Protein conserved in bacteria
OM980_05910	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OM980_05920	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM980_05935	COG0561	phosphatase activity
OM980_05945	COG0542	response to heat
OM980_05955	COG2267	carboxylic ester hydrolase activity
OM980_05970	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM980_05975	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OM980_05980	COG5504	Zn-dependent protease
OM980_05990	COG0180	Tryptophanyl-tRNA synthetase
OM980_06000	COG4166	transmembrane transport
OM980_06005	COG0601	transmembrane transport
OM980_06010	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OM980_06015	COG0444	Belongs to the ABC transporter superfamily
OM980_06020	COG4608	Belongs to the ABC transporter superfamily
OM980_06025	COG0534	Mate efflux family protein
OM980_06030	COG4166	transmembrane transport
OM980_06045	COG0861	Integral membrane protein TerC family
OM980_06050	COG4862	establishment of competence for transformation
OM980_06055	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OM980_06065	COG1164	Oligoendopeptidase f
OM980_06075	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
OM980_06080	COG2346	COG2346, Truncated hemoglobins
OM980_06085	COG4116	CYTH
OM980_06095	COG2357	RelA SpoT domain protein
OM980_06105	COG0564	pseudouridine synthase activity
OM980_06125	COG0463	Glycosyl transferase, family 2
OM980_06125	COG1216	Glycosyl transferase, family 2
OM980_06145	COG0463	Glycosyl transferase, family 2
OM980_06145	COG0457	Tetratricopeptide repeat
OM980_06165	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
OM980_06180	COG1091	dTDP-4-dehydrorhamnose reductase activity
OM980_06225	COG2153	protein acetylation
OM980_06235	COG2382	esterase
OM980_06250	COG5492	domain, Protein
OM980_06255	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OM980_06265	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
OM980_06265	COG0512	Glutamine amidotransferase of anthranilate synthase
OM980_06300	COG1620	l-lactate permease
OM980_06305	COG5634	Uncharacterized conserved protein (DUF2278)
OM980_06360	COG0508	dehydrogenase complex catalyzes the overall conversion of
OM980_06370	COG1476	TRANSCRIPTIONal
OM980_06430	COG2226	methyltransferase
OM980_06440	COG1686	Belongs to the peptidase S11 family
OM980_06445	COG0681	Belongs to the peptidase S26 family
OM980_06480	COG1012	belongs to the aldehyde dehydrogenase family
OM980_06485	COG3842	ATPase activity
OM980_06490	COG1176	ABC-type spermidine putrescine transport system, permease component I
OM980_06495	COG1177	transmembrane transport
OM980_06500	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
OM980_06510	COG2409	Drug exporters of the RND superfamily
OM980_06520	COG0564	pseudouridine synthase activity
OM980_06530	COG2340	Cysteine-rich secretory protein family
OM980_06535	COG0247	lactate metabolic process
OM980_06540	COG0277	FAD linked oxidase domain protein
OM980_06545	COG3835	regulator
OM980_06555	COG0745	RESPONSE REGULATOR receiver
OM980_06560	COG5002	protein histidine kinase activity
OM980_06565	COG2186	Transcriptional regulator
OM980_06585	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
OM980_06595	COG2116	formate transmembrane transporter activity
OM980_06600	COG0861	Integral membrane protein TerC family
OM980_06605	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OM980_06615	COG2030	dehydratase
OM980_06635	COG1028	Short-chain dehydrogenase reductase Sdr
OM980_06640	COG3243	poly(R)-hydroxyalkanoic acid synthase
OM980_06645	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OM980_06650	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OM980_06665	COG1840	ABC-type Fe3 transport system, periplasmic component
OM980_06695	COG1349	DNA-binding transcription factor activity
OM980_06715	COG2861	carbohydrate metabolic process
OM980_06725	COG3852	Histidine kinase
OM980_06730	COG1846	Transcriptional regulator
OM980_06740	COG2318	DinB family
OM980_06750	COG5002	protein histidine kinase activity
OM980_06760	COG0720	synthase
OM980_06775	COG4873	Protein conserved in bacteria
OM980_06805	COG1780	Probably involved in ribonucleotide reductase function
OM980_06825	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
OM980_06830	COG1725	Transcriptional regulator
OM980_06835	COG1131	(ABC) transporter
OM980_06845	COG1131	(ABC) transporter
OM980_06850	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
OM980_06865	COG1522	sequence-specific DNA binding
OM980_06875	COG1335	isochorismatase
OM980_06885	COG1619	proteins homologs of microcin C7 resistance protein MccF
OM980_06890	COG2070	2-Nitropropane dioxygenase
OM980_06895	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
OM980_06905	COG1696	Membrane protein involved in D-alanine export
OM980_06930	COG0716	FMN binding
OM980_06945	COG3173	Aminoglycoside phosphotransferase
OM980_06965	COG0534	Mate efflux family protein
OM980_06970	COG1968	undecaprenyl-diphosphatase activity
OM980_06985	COG1846	Transcriptional regulator
OM980_06995	COG1301	dicarboxylic acid transport
OM980_07000	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OM980_07005	COG4709	membrane
OM980_07010	COG3874	Sporulation protein YtfJ
OM980_07030	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OM980_07035	COG0028	Belongs to the TPP enzyme family
OM980_07040	COG0440	acetolactate synthase activity
OM980_07045	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
OM980_07055	COG0473	3-isopropylmalate dehydrogenase activity
OM980_07080	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
OM980_07115	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
OM980_07130	COG1183	phosphatidylcholine synthase activity
OM980_07135	COG1368	sulfuric ester hydrolase activity
OM980_07145	COG0019	diaminopimelate decarboxylase activity
OM980_07165	COG0529	Catalyzes the synthesis of activated sulfate
OM980_07170	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OM980_07190	COG1648	precorrin-2 dehydrogenase activity
OM980_07195	COG0733	neurotransmitter:sodium symporter activity
OM980_07215	COG1757	Na H antiporter
OM980_07230	COG4758	membrane
OM980_07235	COG4585	Histidine kinase
OM980_07240	COG2197	response regulator
OM980_07250	COG1114	Component of the transport system for branched-chain amino acids
OM980_07260	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
OM980_07285	COG1017	nitric oxide dioxygenase activity
OM980_07285	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
OM980_07300	COG0730	response to heat
OM980_07305	COG0306	phosphate transporter
OM980_07310	COG1392	Phosphate transport regulator
OM980_07315	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OM980_07335	COG1801	Protein of unknown function DUF72
OM980_07345	COG0582	viral genome integration into host DNA
OM980_07350	COG5002	protein histidine kinase activity
OM980_07370	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
OM980_07370	COG0392	lysyltransferase activity
OM980_07385	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
OM980_07390	COG1686	Belongs to the peptidase S11 family
OM980_07395	COG2715	membrane protein required for spore maturation
OM980_07400	COG0700	Nucleoside recognition
OM980_07405	COG1187	pseudouridine synthase activity
OM980_07415	COG1333	cytochrome c biogenesis protein
OM980_07420	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
OM980_07425	COG0745	RESPONSE REGULATOR receiver
OM980_07430	COG5002	protein histidine kinase activity
OM980_07435	COG2096	Adenosyltransferase
OM980_07450	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
OM980_07455	COG1141	Ferredoxin
OM980_07460	COG4955	Helix-turn-helix domain
OM980_07465	COG0514	ATP-dependent DNA helicase (RecQ)
OM980_07470	COG1266	CAAX protease self-immunity
OM980_07490	COG4862	establishment of competence for transformation
OM980_07495	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
OM980_07515	COG0492	ferredoxin-NADP+ reductase activity
OM980_07590	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
OM980_07605	COG0142	geranyltranstransferase activity
OM980_07615	COG0142	geranyltranstransferase activity
OM980_07635	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
OM980_07640	COG0457	Tetratricopeptide repeat
OM980_07660	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
OM980_07670	COG4347	Protein of unknown function (DUF1405)
OM980_07685	COG2738	Putative neutral zinc metallopeptidase
OM980_07695	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM980_07700	COG1694	Mazg nucleotide pyrophosphohydrolase
OM980_07715	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
OM980_07720	COG0438	transferase activity, transferring glycosyl groups
OM980_07755	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
OM980_07755	COG1199	ATP-dependent helicase activity
OM980_07775	COG3935	DnaD domain protein
OM980_07780	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
OM980_07790	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OM980_07790	COG4499	WXG100 protein secretion system (Wss), protein YukC
OM980_07850	COG0116	Belongs to the methyltransferase superfamily
OM980_07860	COG1199	ATP-dependent helicase activity
OM980_07865	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
OM980_07875	COG3173	Aminoglycoside phosphotransferase
OM980_07880	COG0024	Methionine aminopeptidase
OM980_07890	COG2233	PERMEase
OM980_07895	COG2311	Membrane
OM980_07900	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
OM980_07910	COG0456	acetyltransferase
OM980_07960	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OM980_07985	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
OM980_08000	COG1215	transferase activity, transferring glycosyl groups
OM980_08005	COG0438	transferase activity, transferring glycosyl groups
OM980_08020	COG0454	-acetyltransferase
OM980_08040	COG0328	RNA-DNA hybrid ribonuclease activity
OM980_08080	COG1280	lysine exporter protein (LysE YggA)
OM980_08095	COG3162	membrane
OM980_08100	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OM980_08105	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
OM980_08115	COG0475	glutathione-regulated potassium exporter activity
OM980_08120	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
OM980_08125	COG0789	Transcriptional regulator
OM980_08125	COG4978	Transcriptional regulator
OM980_08135	COG2323	membrane
OM980_08140	COG1434	Gram-negative-bacterium-type cell wall biogenesis
OM980_08195	COG1923	regulation of RNA biosynthetic process
OM980_08205	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
OM980_08210	COG1360	Flagellar Motor Protein
OM980_08215	COG2201	protein-glutamate methylesterase activity
OM980_08225	COG1776	CheC inhibitor of MCP methylation
OM980_08225	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
OM980_08240	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
OM980_08260	COG1256	bacterial-type flagellum assembly
OM980_08285	COG1815	bacterial-type flagellum-dependent cell motility
OM980_08290	COG1558	bacterial-type flagellum-dependent cell motility
OM980_08305	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
OM980_08315	COG1157	protein secretion by the type III secretion system
OM980_08360	COG0463	Glycosyl transferase, family 2
OM980_08385	COG0463	Glycosyl transferase, family 2
OM980_08385	COG0457	Tetratricopeptide repeat
OM980_08400	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
OM980_08405	COG0741	lytic transglycosylase activity
OM980_08420	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
OM980_08420	COG1776	CheC inhibitor of MCP methylation
OM980_08430	COG1338	Plays a role in the flagellum-specific transport system
OM980_08435	COG1987	bacterial-type flagellum assembly
OM980_08445	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
OM980_08450	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
OM980_08460	COG4786	Flagellar basal body rod
OM980_08465	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
OM980_08490	COG1309	transcriptional regulator
OM980_08510	COG2329	Antibiotic biosynthesis monooxygenase
OM980_08535	COG0583	DNA-binding transcription factor activity
OM980_08545	COG0725	ABC transporter, periplasmic molybdate-binding protein
OM980_08555	COG1234	tRNA 3'-trailer cleavage
OM980_08580	COG1686	Belongs to the peptidase S11 family
OM980_08590	COG0406	alpha-ribazole phosphatase activity
OM980_08620	COG0367	asparagine synthase
OM980_08650	COG1802	Transcriptional regulator
OM980_08655	COG0697	spore germination
OM980_08660	COG0523	cobalamin synthesis protein
OM980_08665	COG0701	Predicted permease
OM980_08675	COG0438	transferase activity, transferring glycosyl groups
OM980_08675	COG1216	Glycosyl transferase, family 2
OM980_08680	COG1757	Na H antiporter
OM980_08685	COG0114	fumarate hydratase activity
OM980_08710	COG3340	Belongs to the peptidase S51 family
OM980_08730	COG0785	Cytochrome C biogenesis protein
OM980_08760	COG2733	membrane
OM980_08795	COG1131	(ABC) transporter
OM980_08810	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OM980_08815	COG0528	UMP kinase activity
OM980_08825	COG1027	Aspartate ammonia-lyase
OM980_08830	COG0281	malic enzyme
OM980_08835	COG4191	Histidine kinase
OM980_08840	COG0784	Response regulator, receiver
OM980_08845	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OM980_08905	COG0860	N-Acetylmuramoyl-L-alanine amidase
OM980_08915	COG2814	Major facilitator Superfamily
OM980_08930	COG1966	Carbon starvation protein
OM980_08945	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM980_08955	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
OM980_08965	COG2223	nitrite transmembrane transporter activity
OM980_08970	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
OM980_08985	COG2244	polysaccharide biosynthetic process
OM980_08990	COG0733	neurotransmitter:sodium symporter activity
OM980_09000	COG5566	PFAM Mor transcription activator
OM980_09005	COG2323	membrane
OM980_09020	COG2084	Dehydrogenase
OM980_09035	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OM980_09045	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OM980_09050	COG0028	Belongs to the TPP enzyme family
OM980_09055	COG0440	acetolactate synthase activity
OM980_09060	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
OM980_09070	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
OM980_09095	COG2814	Major facilitator Superfamily
OM980_09100	COG3384	dioxygenase
OM980_09110	COG3279	Response regulator of the LytR AlgR family
OM980_09115	COG0427	acetyl-CoA hydrolase
OM980_09135	COG1073	alpha beta
OM980_09165	COG0535	radical SAM domain protein
OM980_09170	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM980_09190	COG1914	H( )-stimulated, divalent metal cation uptake system
OM980_09205	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
OM980_09240	COG2390	Transcriptional regulator
OM980_09250	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM980_09255	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
OM980_09270	COG4224	UPF0291 protein
OM980_09290	COG0006	proline dipeptidase activity
OM980_09295	COG2132	Multicopper oxidase
OM980_09310	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
OM980_09325	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
OM980_09340	COG1276	copper resistance
OM980_09340	COG2372	response to copper ion
OM980_09345	COG4549	nuclear export factor GLE1
OM980_09355	COG0697	spore germination
OM980_09360	COG0583	DNA-binding transcription factor activity
OM980_09365	COG1959	2 iron, 2 sulfur cluster binding
OM980_09370	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
OM980_09375	COG0778	Nitroreductase
OM980_09390	COG0628	permease
OM980_09400	COG1231	oxidoreductase activity
OM980_09405	COG0523	cobalamin synthesis protein
OM980_09420	COG0318	PFAM AMP-dependent synthetase and ligase
OM980_09425	COG2030	dehydratase
OM980_09430	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM980_09440	COG0411	ABC transporter
OM980_09460	COG0583	DNA-binding transcription factor activity
OM980_09470	COG1942	4-Oxalocrotonate Tautomerase
OM980_09480	COG1846	Transcriptional regulator
OM980_09490	COG1271	oxidase subunit
OM980_09495	COG1294	oxidase, subunit
OM980_09500	COG4988	ABC transporter
OM980_09505	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
OM980_09525	COG1686	Belongs to the peptidase S11 family
OM980_09540	COG0791	NLP P60 protein
OM980_09540	COG1388	LysM domain
OM980_09555	COG0745	RESPONSE REGULATOR receiver
OM980_09560	COG5002	protein histidine kinase activity
OM980_09570	COG0300	oxidoreductase activity
OM980_09605	COG0460	homoserine dehydrogenase
OM980_09630	COG1316	TRANSCRIPTIONal
OM980_09640	COG0745	RESPONSE REGULATOR receiver
OM980_09645	COG5002	protein histidine kinase activity
OM980_09660	COG1285	pathogenesis
OM980_09665	COG1247	-acetyltransferase
OM980_09685	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OM980_09695	COG1082	Xylose isomerase domain protein TIM barrel
OM980_09710	COG1279	arginine transmembrane transporter activity
OM980_09720	COG1752	Esterase of the alpha-beta hydrolase superfamily
OM980_09760	COG2002	toxin-antitoxin pair type II binding
OM980_09765	COG1404	Belongs to the peptidase S8 family
OM980_09770	COG0640	Transcriptional regulator
OM980_09775	COG0667	Aldo Keto reductase
OM980_09780	COG2814	Major facilitator Superfamily
OM980_09805	COG0840	transmembrane signaling receptor activity
OM980_09820	COG3949	Membrane
OM980_09825	COG0783	Belongs to the Dps family
OM980_09840	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OM980_09850	COG1231	oxidoreductase activity
OM980_09860	COG4989	oxidoreductase activity
OM980_09865	COG0523	cobalamin synthesis protein
OM980_09870	COG0456	acetyltransferase
OM980_09930	COG0803	Belongs to the bacterial solute-binding protein 9 family
OM980_09930	COG3443	Belongs to the bacterial solute-binding protein 9 family
OM980_09940	COG0702	epimerase
OM980_09950	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
OM980_09960	COG4166	transmembrane transport
OM980_09975	COG0406	alpha-ribazole phosphatase activity
OM980_09985	COG5337	Spore coat protein CotH
OM980_09990	COG1051	belongs to the nudix hydrolase family
OM980_09995	COG0586	Pfam SNARE associated Golgi protein
OM980_10000	COG2244	polysaccharide biosynthetic process
OM980_10010	COG0701	Predicted permease
OM980_10015	COG3689	TIGRFAM TIGR03943 family protein
OM980_10020	COG1607	acyl-coa hydrolase
OM980_10045	COG0702	epimerase
OM980_10050	COG2839	Protein conserved in bacteria
OM980_10055	COG1253	flavin adenine dinucleotide binding
OM980_10070	COG1114	Component of the transport system for branched-chain amino acids
OM980_10075	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OM980_10095	COG0860	N-Acetylmuramoyl-L-alanine amidase
OM980_10105	COG1876	peptidase activity
OM980_10115	COG0154	amidase activity
OM980_10120	COG2211	Major facilitator Superfamily
OM980_10140	COG0561	phosphatase activity
OM980_10150	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
OM980_10155	COG4106	trans-aconitate 2-methyltransferase activity
OM980_10170	COG1819	glycosyl
OM980_10175	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM980_10180	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM980_10215	COG0456	acetyltransferase
OM980_10270	COG3874	Sporulation protein YtfJ
OM980_10295	COG2226	methyltransferase
OM980_10320	COG0346	lactoylglutathione lyase activity
OM980_10330	COG0604	alcohol dehydrogenase
OM980_10335	COG1595	DNA-templated transcription, initiation
OM980_10360	COG0386	Belongs to the glutathione peroxidase family
OM980_10365	COG1305	Transglutaminase-like
OM980_10370	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
OM980_10375	COG0714	Associated with various cellular activities
OM980_10390	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
OM980_10395	COG1140	nitrate reductase beta subunit
OM980_10400	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
OM980_10405	COG2181	nitrate reductase activity
OM980_10425	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
OM980_10430	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
OM980_10435	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OM980_10440	COG0303	'Molybdopterin
OM980_10445	COG0314	molybdopterin synthase activity
OM980_10455	COG2223	nitrite transmembrane transporter activity
OM980_10470	COG1648	precorrin-2 dehydrogenase activity
OM980_10480	COG1587	Uroporphyrinogen-III synthase
OM980_10480	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
OM980_10485	COG2146	nitrite reductase [NAD(P)H] activity
OM980_10490	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OM980_10495	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
OM980_10530	COG2359	stage V sporulation protein S
OM980_10555	COG1418	mRNA catabolic process
OM980_10560	COG0488	(ABC) transporter
OM980_10575	COG0629	single-stranded DNA binding
OM980_10590	COG1413	lyase activity
OM980_10605	COG2136	Putative SAM-dependent methyltransferase
OM980_10605	COG2521	methyltransferase
OM980_10610	COG0018	arginyl-trna synthetase
OM980_10635	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
OM980_10655	COG0017	Asparaginyl-tRNA synthetase
OM980_10675	COG1674	ftsk spoiiie
OM980_10745	COG1929	Belongs to the glycerate kinase type-1 family
OM980_10750	COG0471	metal ion transport
OM980_10755	COG0745	RESPONSE REGULATOR receiver
OM980_10760	COG3850	Histidine kinase
OM980_10760	COG5002	protein histidine kinase activity
OM980_10775	COG0733	neurotransmitter:sodium symporter activity
OM980_10800	COG2610	gluconate transmembrane transporter activity
OM980_10805	COG1454	alcohol dehydrogenase
OM980_10810	COG1794	racemase activity, acting on amino acids and derivatives
OM980_10820	COG0456	acetyltransferase
OM980_10835	COG1131	(ABC) transporter
OM980_10850	COG0546	phosphoglycolate phosphatase activity
OM980_10870	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OM980_10885	COG0768	penicillin binding
OM980_10890	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
OM980_10895	COG0204	Acyl-transferase
OM980_10900	COG1272	protein, Hemolysin III
OM980_10910	COG0805	protein transport
OM980_10920	COG1307	EDD domain protein, DegV family
OM980_10925	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
OM980_10930	COG1999	signal sequence binding
OM980_10935	COG0071	Belongs to the small heat shock protein (HSP20) family
OM980_10940	COG0367	asparagine synthase
OM980_10955	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM980_10960	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OM980_10995	COG0668	transmembrane transport
OM980_11000	COG4585	Histidine kinase
OM980_11000	COG2203	Gaf domain
OM980_11005	COG2197	response regulator
OM980_11015	COG1064	alcohol dehydrogenase
OM980_11070	COG1125	glycine betaine transport
OM980_11070	COG0517	IMP dehydrogenase activity
OM980_11075	COG1174	glycine betaine transport
OM980_11110	COG1253	flavin adenine dinucleotide binding
OM980_11115	COG1012	belongs to the aldehyde dehydrogenase family
OM980_11120	COG5506	Protein of unknown function (DUF1694)
OM980_11135	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
OM980_11140	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
OM980_11145	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
OM980_11150	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
OM980_11155	COG0456	acetyltransferase
OM980_11160	COG3829	transcription factor binding
OM980_11165	COG1509	lysine 2,3-aminomutase activity
OM980_11205	COG4326	sporulation control protein
OM980_11210	COG0671	phosphoesterase, PA-phosphatase related
OM980_11215	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
OM980_11220	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OM980_11250	COG1715	Restriction endonuclease
OM980_11250	COG1787	Restriction endonuclease
OM980_11340	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OM980_11380	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OM980_11380	COG4499	WXG100 protein secretion system (Wss), protein YukC
OM980_11390	COG2814	Major facilitator Superfamily
OM980_11395	COG4841	protein insertion into membrane
OM980_11400	COG0372	Belongs to the citrate synthase family
OM980_11405	COG2079	MmgE PrpD family protein
OM980_11410	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
OM980_11415	COG1960	acyl-CoA dehydrogenase activity
OM980_11420	COG2084	Dehydrogenase
OM980_11430	COG1280	lysine exporter protein (LysE YggA)
OM980_11435	COG1024	Enoyl-CoA hydratase
OM980_11450	COG0420	3'-5' exonuclease activity
OM980_11455	COG0419	ATPase involved in DNA repair
OM980_11475	COG2223	nitrite transmembrane transporter activity
OM980_11480	COG1028	Short-chain dehydrogenase reductase Sdr
OM980_11485	COG1169	isochorismate synthase
OM980_11490	COG1021	2,3-dihydroxybenzoate-AMP ligase
OM980_11495	COG3433	isochorismatase activity
OM980_11495	COG1535	isochorismatase
OM980_11500	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
OM980_11505	COG3251	PFAM MbtH domain protein
OM980_11510	COG2814	Major facilitator Superfamily
OM980_11525	COG0776	regulation of translation
OM980_11535	COG2318	DinB family
OM980_11545	COG1115	amino acid carrier protein
OM980_11560	COG2329	Antibiotic biosynthesis monooxygenase
OM980_11565	COG1187	pseudouridine synthase activity
OM980_11570	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
OM980_11585	COG0596	Alpha beta hydrolase
OM980_11590	COG2814	Major facilitator Superfamily
OM980_11610	COG2226	methyltransferase
OM980_11655	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM980_11690	COG1247	-acetyltransferase
OM980_11720	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
OM980_11730	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM980_11740	COG1278	Cold shock
OM980_11755	COG0010	Belongs to the arginase family
OM980_11760	COG0561	phosphatase activity
OM980_11805	COG0583	DNA-binding transcription factor activity
OM980_11810	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
OM980_11825	COG0583	DNA-binding transcription factor activity
OM980_11830	COG2258	MOSC domain
OM980_11845	COG1132	(ABC) transporter
OM980_11850	COG1132	(ABC) transporter
OM980_11870	COG1396	sequence-specific DNA binding
OM980_11895	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
OM980_11900	COG1595	DNA-templated transcription, initiation
OM980_11925	COG1649	PFAM Uncharacterised BCR, COG1649
OM980_11950	COG2971	BadF BadG BcrA BcrD
OM980_11955	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
OM980_11960	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
OM980_11980	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM980_12010	COG1309	transcriptional regulator
OM980_12025	COG1136	(ABC) transporter
OM980_12025	COG0577	efflux transmembrane transporter activity
OM980_12030	COG0500	methyltransferase
OM980_12030	COG3615	Tellurite resistance protein tehB
OM980_12040	COG2226	methyltransferase
OM980_12045	COG3961	Belongs to the TPP enzyme family
OM980_12050	COG1846	Transcriptional regulator
OM980_12090	COG2195	Cleaves the N-terminal amino acid of tripeptides
OM980_12105	COG1595	DNA-templated transcription, initiation
OM980_12125	COG2367	Beta-lactamase
OM980_12130	COG0671	phosphoesterase, PA-phosphatase related
OM980_12135	COG1609	Transcriptional regulator
OM980_12140	COG2814	Major facilitator Superfamily
OM980_12145	COG0673	inositol 2-dehydrogenase activity
OM980_12155	COG1012	belongs to the aldehyde dehydrogenase family
OM980_12170	COG0191	fructose-bisphosphate aldolase activity
OM980_12175	COG3718	enzyme involved in inositol metabolism
OM980_12200	COG0457	Tetratricopeptide repeat
OM980_12205	COG1476	TRANSCRIPTIONal
OM980_12220	COG1876	peptidase activity
OM980_12240	COG1309	transcriptional regulator
OM980_12245	COG0488	(ABC) transporter
OM980_12260	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM980_12275	COG1252	NADH dehydrogenase
OM980_12280	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OM980_12295	COG1131	(ABC) transporter
OM980_12305	COG1309	transcriptional regulator
OM980_12320	COG1960	acyl-CoA dehydrogenase activity
OM980_12325	COG0439	Biotin carboxylase
OM980_12330	COG0511	ligase activity, forming carbon-carbon bonds
OM980_12335	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
OM980_12340	COG1024	Enoyl-CoA hydratase
OM980_12345	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
OM980_12350	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OM980_12360	COG1247	-acetyltransferase
OM980_12365	COG0572	uridine kinase
OM980_12375	COG2318	DinB family
OM980_12405	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
OM980_12445	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OM980_12445	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OM980_12470	COG2814	Major facilitator Superfamily
OM980_12490	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
OM980_12510	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM980_12525	COG1063	alcohol dehydrogenase
OM980_12540	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
OM980_12545	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
OM980_12560	COG3773	Cell wall hydrolase
OM980_12570	COG0745	RESPONSE REGULATOR receiver
OM980_12600	COG1136	(ABC) transporter
OM980_12625	COG0460	homoserine dehydrogenase
OM980_12630	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM980_12640	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
OM980_12710	COG2124	cytochrome p450
OM980_12745	COG0561	phosphatase activity
OM980_12755	COG0768	penicillin binding
OM980_12760	COG1819	glycosyl
OM980_12765	COG1794	racemase activity, acting on amino acids and derivatives
OM980_12775	COG1122	ATPase activity
OM980_12790	COG2205	protein histidine kinase activity
OM980_12800	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
OM980_12810	COG0768	penicillin binding
OM980_12820	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OM980_12855	COG0693	protein deglycase activity
OM980_12885	COG2814	Major facilitator Superfamily
OM980_12900	COG0584	glycerophosphoryl diester phosphodiesterase
OM980_12920	COG0697	spore germination
OM980_12950	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OM980_12960	COG2223	nitrite transmembrane transporter activity
OM980_12975	COG2816	NAD+ diphosphatase activity
OM980_12980	COG0592	DNA-directed DNA polymerase activity
OM980_12985	COG1051	belongs to the nudix hydrolase family
OM980_13020	COG3878	Protein conserved in bacteria
OM980_13070	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
OM980_13085	COG0322	excinuclease ABC activity
OM980_13125	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OM980_13150	COG1011	Hydrolase
OM980_13170	COG0076	glutamate decarboxylase activity
OM980_13185	COG1523	belongs to the glycosyl hydrolase 13 family
OM980_13190	COG3227	Zinc metalloprotease (Elastase)
OM980_13210	COG0201	protein transport
OM980_13220	COG0697	spore germination
OM980_13225	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM980_13255	COG4129	membrane
OM980_13260	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM980_13275	COG2959	enzyme of heme biosynthesis
OM980_13295	COG3483	tryptophan 2,3-dioxygenase activity
OM980_13300	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
OM980_13305	COG3844	kynureninase activity
OM980_13310	COG1309	transcriptional regulator
OM980_13340	COG3284	Transcriptional regulator
OM980_13360	COG1349	DNA-binding transcription factor activity
OM980_13380	COG1959	2 iron, 2 sulfur cluster binding
OM980_13395	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OM980_13400	COG0508	dehydrogenase complex catalyzes the overall conversion of
OM980_13405	COG0022	dehydrogenase e1 component
OM980_13410	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
OM980_13420	COG1028	Short-chain dehydrogenase reductase Sdr
OM980_13425	COG0456	acetyltransferase
OM980_13425	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
OM980_13455	COG4176	ABC-type proline glycine betaine transport system permease component
OM980_13460	COG0517	IMP dehydrogenase activity
OM980_13460	COG4175	Glycine betaine
OM980_13485	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
OM980_13490	COG2153	protein acetylation
OM980_13495	COG3397	chitin binding
OM980_13510	COG2205	protein histidine kinase activity
OM980_13540	COG0658	competence protein
OM980_13540	COG2333	competence protein COMEC
OM980_13590	COG3973	AAA domain
OM980_13605	COG2105	PFAM AIG2 family protein
OM980_13610	COG0514	ATP-dependent DNA helicase (RecQ)
OM980_13630	COG4637	Psort location Cytoplasmic, score
OM980_13655	COG3397	chitin binding
OM980_13670	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
OM980_13675	COG1115	amino acid carrier protein
OM980_13680	COG1012	belongs to the aldehyde dehydrogenase family
OM980_13685	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
OM980_13695	COG3938	Belongs to the proline racemase family
OM980_13700	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OM980_13740	COG0586	Pfam SNARE associated Golgi protein
OM980_13755	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
OM980_13760	COG0519	Catalyzes the synthesis of GMP from XMP
OM980_13765	COG4166	transmembrane transport
OM980_13775	COG4948	Mandelate Racemase Muconate Lactonizing
OM980_13820	COG2936	dipeptidyl-peptidase activity
OM980_13825	COG5002	protein histidine kinase activity
OM980_13875	COG1307	EDD domain protein, DegV family
OM980_13895	COG2814	Major facilitator Superfamily
OM980_13905	COG1664	Polymer-forming cytoskeletal
OM980_13910	COG0789	Transcriptional regulator
OM980_13915	COG4533	DNA binding
OM980_13920	COG0477	Major facilitator Superfamily
OM980_13920	COG2814	Major facilitator Superfamily
OM980_13940	COG2261	transglycosylase associated protein
OM980_13955	COG2226	methyltransferase
OM980_13990	COG0436	Aminotransferase
OM980_13995	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
OM980_14000	COG5146	pantothenate kinase activity
OM980_14065	COG0628	permease
OM980_14080	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OM980_14085	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OM980_14090	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OM980_14095	COG1116	anion transmembrane transporter activity
OM980_14115	COG2816	NAD+ diphosphatase activity
OM980_14135	COG2746	aminoglycoside 3-N-acetyltransferase activity
OM980_14160	COG0697	spore germination
OM980_14165	COG2318	DinB family
OM980_14185	COG4912	Dna alkylation repair
OM980_14205	COG0861	Integral membrane protein TerC family
OM980_14210	COG1368	sulfuric ester hydrolase activity
OM980_14215	COG0488	(ABC) transporter
OM980_14230	COG1309	transcriptional regulator
OM980_14245	COG0287	Prephenate dehydrogenase
OM980_14250	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
OM980_14255	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
OM980_14260	COG1605	Chorismate mutase
OM980_14260	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
OM980_14295	COG3584	3D domain protein
OM980_14295	COG1388	LysM domain
OM980_14305	COG1595	DNA-templated transcription, initiation
OM980_14330	COG1879	ABC-type sugar transport system periplasmic component
OM980_14340	COG1172	Belongs to the binding-protein-dependent transport system permease family
OM980_14350	COG2390	Transcriptional regulator
OM980_14385	COG2329	Antibiotic biosynthesis monooxygenase
OM980_14405	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM980_14415	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
OM980_14420	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
OM980_14425	COG4187	Peptidase family M20/M25/M40
OM980_14430	COG1414	Transcriptional regulator
OM980_14435	COG0833	amino acid
OM980_14440	COG1690	Belongs to the RtcB family
OM980_14450	COG1785	Belongs to the alkaline phosphatase family
OM980_14460	COG3655	Transcriptional regulator
OM980_14475	COG4377	Putative membrane peptidase family (DUF2324)
OM980_14485	COG3279	Response regulator of the LytR AlgR family
OM980_14495	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM980_14500	COG0346	lactoylglutathione lyase activity
OM980_14520	COG0714	Associated with various cellular activities
OM980_14545	COG0463	Glycosyl transferase, family 2
OM980_14565	COG0463	Glycosyl transferase, family 2
OM980_14575	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
OM980_14580	COG0753	catalase activity
OM980_14590	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
OM980_14615	COG0714	Associated with various cellular activities
OM980_14625	COG0778	Nitroreductase
OM980_14630	COG1846	Transcriptional regulator
OM980_14665	COG1725	Transcriptional regulator
OM980_14675	COG0577	efflux transmembrane transporter activity
OM980_14675	COG1136	(ABC) transporter
OM980_14700	COG2207	Transcriptional regulator
OM980_14705	COG0456	acetyltransferase
OM980_14725	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM980_14745	COG0642	Histidine kinase
OM980_14750	COG0745	RESPONSE REGULATOR receiver
OM980_14755	COG0596	Alpha beta hydrolase
OM980_14785	COG0730	response to heat
OM980_14795	COG0833	amino acid
OM980_14805	COG4335	DNA alkylation repair
OM980_14845	COG0768	penicillin binding
OM980_14855	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
OM980_14890	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
OM980_14895	COG1414	Transcriptional regulator
OM980_14910	COG0860	N-Acetylmuramoyl-L-alanine amidase
OM980_14915	COG0640	Transcriptional regulator
OM980_14925	COG1960	acyl-CoA dehydrogenase activity
OM980_14940	COG3314	Sporulation integral membrane protein YlbJ
OM980_14955	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
OM980_14970	COG3848	Pyruvate phosphate dikinase
OM980_14970	COG0574	Belongs to the PEP-utilizing enzyme family
OM980_14975	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM980_14990	COG5577	PFAM Coat F domain
OM980_14995	COG3403	YqcI/YcgG family
OM980_15000	COG1280	lysine exporter protein (LysE YggA)
OM980_15035	COG1063	alcohol dehydrogenase
OM980_15050	COG1027	Aspartate ammonia-lyase
OM980_15055	COG0252	asparaginase activity
OM980_15060	COG1396	sequence-specific DNA binding
OM980_15070	COG0322	excinuclease ABC activity
OM980_15075	COG0531	amino acid
OM980_15080	COG1114	Component of the transport system for branched-chain amino acids
OM980_15085	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
OM980_15095	COG0281	malic enzyme
OM980_15115	COG0531	amino acid
OM980_15130	COG0784	Response regulator, receiver
OM980_15140	COG2066	Belongs to the glutaminase family
OM980_15175	COG0737	Belongs to the 5'-nucleotidase family
OM980_15180	COG0753	catalase activity
OM980_15185	COG2267	carboxylic ester hydrolase activity
OM980_15190	COG1335	isochorismatase
OM980_15210	COG0583	DNA-binding transcription factor activity
OM980_15260	COG0415	Belongs to the DNA photolyase family
OM980_15265	COG0288	reversible hydration of carbon dioxide
OM980_15275	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OM980_15280	COG5609	conserved protein (DUF2294)
OM980_15295	COG1575	Belongs to the MenA family. Type 1 subfamily
OM980_15300	COG2267	carboxylic ester hydrolase activity
OM980_15305	COG0803	Belongs to the bacterial solute-binding protein 9 family
OM980_15310	COG1108	ABC-type Mn2 Zn2 transport systems permease components
OM980_15315	COG1121	(ABC) transporter
OM980_15345	COG0798	PFAM Bile acid sodium symporter
OM980_15350	COG0346	lactoylglutathione lyase activity
OM980_15355	COG0640	Transcriptional regulator
OM980_15370	COG0443	Heat shock 70 kDa protein
OM980_15385	COG1522	sequence-specific DNA binding
OM980_15400	COG0346	lactoylglutathione lyase activity
OM980_15420	COG2169	Transcriptional regulator
OM980_15425	COG2169	Transcriptional regulator
OM980_15470	COG2814	Major facilitator Superfamily
OM980_15495	COG0745	RESPONSE REGULATOR receiver
OM980_15500	COG5002	protein histidine kinase activity
OM980_15500	COG3850	Histidine kinase
OM980_15525	COG2515	1-aminocyclopropane-1-carboxylate deaminase
OM980_15545	COG1476	TRANSCRIPTIONal
OM980_15560	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM980_15565	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OM980_15575	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM980_15580	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
OM980_15595	COG1136	(ABC) transporter
OM980_15600	COG0577	efflux transmembrane transporter activity
OM980_15615	COG3850	Histidine kinase
OM980_15615	COG5002	protein histidine kinase activity
OM980_15625	COG2364	Membrane
OM980_15630	COG1846	Transcriptional regulator
OM980_15640	COG2808	Putative FMN-binding domain
OM980_15645	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM980_15650	COG2271	Major facilitator Superfamily
OM980_15655	COG1556	Lactate utilization protein
OM980_15660	COG1139	Iron-sulfur cluster binding protein
OM980_15670	COG0583	DNA-binding transcription factor activity
OM980_15680	COG1619	proteins homologs of microcin C7 resistance protein MccF
OM980_15700	COG0738	Major facilitator superfamily
OM980_15705	COG0673	inositol 2-dehydrogenase activity
OM980_15710	COG0561	phosphatase activity
OM980_15720	COG1609	Transcriptional regulator
OM980_15725	COG0457	Tetratricopeptide repeat
OM980_15745	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
OM980_15775	COG0534	Mate efflux family protein
OM980_15790	COG2184	nucleotidyltransferase activity
OM980_15795	COG2814	Major facilitator Superfamily
OM980_15800	COG1309	transcriptional regulator
OM980_15815	COG0814	amino acid
OM980_15820	COG1760	l-serine dehydratase
OM980_15825	COG1760	l-serine dehydratase
OM980_15835	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
OM980_15840	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
OM980_15850	COG1335	isochorismatase
OM980_15855	COG1522	sequence-specific DNA binding
OM980_15860	COG0531	amino acid
OM980_15880	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
OM980_15900	COG1595	DNA-templated transcription, initiation
OM980_15915	COG0662	Cupin 2, conserved barrel domain protein
OM980_15920	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM980_15920	COG2207	Transcriptional regulator
OM980_15970	COG0477	Major facilitator Superfamily
OM980_15980	COG1846	Transcriptional regulator
OM980_15985	COG2814	Major facilitator Superfamily
OM980_15995	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
OM980_16000	COG1131	(ABC) transporter
OM980_16020	COG2076	Multidrug Resistance protein
OM980_16025	COG1309	transcriptional regulator
OM980_16035	COG2031	fatty acid transporter
OM980_16045	COG2249	NAD(P)H dehydrogenase (quinone) activity
OM980_16075	COG1122	ATPase activity
OM980_16080	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
OM980_16095	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
OM980_16100	COG1288	antiporter activity
OM980_16105	COG2356	endonuclease I
OM980_16120	COG3620	sequence-specific DNA binding
OM980_16125	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
OM980_16130	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
OM980_16135	COG0124	histidyl-tRNA synthetase
OM980_16150	COG1733	regulation of RNA biosynthetic process
OM980_16155	COG0778	Nitroreductase
OM980_16175	COG1028	Short-chain dehydrogenase reductase Sdr
OM980_16185	COG1131	(ABC) transporter
OM980_16210	COG1011	Hydrolase
OM980_16220	COG2365	Tyrosine phosphatase family
OM980_16245	COG0346	lactoylglutathione lyase activity
OM980_16250	COG1940	carbohydrate kinase activity
OM980_16255	COG0738	Major facilitator superfamily
OM980_16260	COG0110	maltose O-acetyltransferase activity
OM980_16270	COG0577	efflux transmembrane transporter activity
OM980_16270	COG1136	(ABC) transporter
OM980_16285	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
OM980_16290	COG0628	permease
OM980_16310	COG2226	methyltransferase
OM980_16320	COG0477	Major facilitator Superfamily
OM980_16350	COG1253	flavin adenine dinucleotide binding
OM980_16355	COG0789	Transcriptional regulator
OM980_16360	COG0697	spore germination
OM980_16365	COG1357	PFAM Pentapeptide repeats (8 copies)
OM980_16370	COG3813	Protein conserved in bacteria
OM980_16375	COG2706	6-phosphogluconolactonase activity
OM980_16380	COG1070	Carbohydrate kinase
OM980_16390	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
OM980_16395	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
OM980_16405	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
OM980_16410	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
OM980_16415	COG0604	alcohol dehydrogenase
OM980_16420	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OM980_16430	COG0604	alcohol dehydrogenase
OM980_16430	COG3321	synthase
OM980_16435	COG1028	Short-chain dehydrogenase reductase Sdr
OM980_16460	COG0656	L-ascorbic acid biosynthetic process
OM980_16465	COG2814	Major facilitator Superfamily
OM980_16480	COG0346	lactoylglutathione lyase activity
OM980_16485	COG0814	amino acid
OM980_16510	COG1393	Belongs to the ArsC family
OM980_16515	COG1733	regulation of RNA biosynthetic process
OM980_16520	COG2188	Transcriptional regulator
OM980_16530	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
OM980_16535	COG1733	regulation of RNA biosynthetic process
OM980_16540	COG1733	regulation of RNA biosynthetic process
OM980_16555	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM980_16575	COG0384	phenazine biosynthesis protein PhzF
OM980_16585	COG1028	Short-chain dehydrogenase reductase Sdr
OM980_16595	COG0318	PFAM AMP-dependent synthetase and ligase
OM980_16605	COG1733	regulation of RNA biosynthetic process
OM980_16635	COG1191	sigma factor activity
OM980_16650	COG1309	transcriptional regulator
OM980_16670	COG3152	Membrane
OM980_16695	COG1151	hydroxylamine reductase activity
OM980_16705	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM980_16710	COG3409	Peptidoglycan-binding domain 1 protein
OM980_16710	COG3757	hydrolase, family 25
OM980_16745	COG2072	flavoprotein involved in K transport
OM980_16785	COG1113	amino acid transport
OM980_16790	COG2814	Major facilitator Superfamily
OM980_16820	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
OM980_16825	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
OM980_16850	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM980_16855	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM980_16860	COG3739	integral membrane protein
OM980_16865	COG0384	phenazine biosynthesis protein PhzF
OM980_16895	COG0583	DNA-binding transcription factor activity
OM980_16915	COG1193	negative regulation of DNA recombination
OM980_16935	COG1164	Oligoendopeptidase f
OM980_16940	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OM980_16970	COG0584	glycerophosphoryl diester phosphodiesterase
OM980_16995	COG0640	Transcriptional regulator
OM980_17000	COG0604	alcohol dehydrogenase
OM980_17020	COG2808	Putative FMN-binding domain
OM980_17025	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
OM980_17035	COG0385	Bile acid
OM980_17040	COG0277	FAD linked oxidase domain protein
OM980_17070	COG1216	Glycosyl transferase, family 2
OM980_17075	COG1024	Enoyl-CoA hydratase
OM980_17085	COG1285	pathogenesis
OM980_17100	COG2514	catechol 2,3-dioxygenase activity
OM980_17105	COG2720	vancomycin resistance protein
OM980_17145	COG0716	FMN binding
OM980_17175	COG1028	Short-chain dehydrogenase reductase Sdr
OM980_17185	COG0165	Argininosuccinate lyase
OM980_17200	COG4145	pantothenate transmembrane transporter activity
OM980_17210	COG1012	belongs to the aldehyde dehydrogenase family
OM980_17215	COG1028	Short-chain dehydrogenase reductase Sdr
OM980_17225	COG1657	PFAM Prenyltransferase squalene oxidase
OM980_17230	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
OM980_17235	COG2962	Rard protein
OM980_17240	COG3326	Membrane
OM980_17255	COG0489	protein tyrosine kinase activity
OM980_17265	COG0314	molybdopterin synthase activity
OM980_17270	COG0303	'Molybdopterin
OM980_17275	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OM980_17280	COG2116	formate transmembrane transporter activity
OM980_17290	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
OM980_17295	COG5609	conserved protein (DUF2294)
OM980_17300	COG2427	Protein of unknown function (DUF1641)
OM980_17305	COG3383	formate dehydrogenase (NAD+) activity
OM980_17315	COG0697	spore germination
OM980_17355	COG2226	methyltransferase
OM980_17360	COG4166	transmembrane transport
OM980_17365	COG4166	transmembrane transport
OM980_17370	COG4166	transmembrane transport
OM980_17375	COG1301	dicarboxylic acid transport
OM980_17380	COG1316	TRANSCRIPTIONal
OM980_17390	COG1595	DNA-templated transcription, initiation
OM980_17405	COG1131	(ABC) transporter
OM980_17415	COG0673	inositol 2-dehydrogenase activity
OM980_17420	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
OM980_17425	COG0187	DNA topoisomerase II activity
OM980_17430	COG1832	CoA-binding protein
OM980_17435	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OM980_17440	COG0745	RESPONSE REGULATOR receiver
OM980_17455	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
OM980_17460	COG4841	protein insertion into membrane
OM980_17465	COG0824	Thioesterase
OM980_17495	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OM980_17505	COG2274	protein secretion by the type I secretion system
OM980_17510	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
OM980_17550	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
OM980_17565	COG0183	Belongs to the thiolase family
OM980_17570	COG0318	PFAM AMP-dependent synthetase and ligase
OM980_17575	COG1268	BioY protein
OM980_17580	COG0318	PFAM AMP-dependent synthetase and ligase
OM980_17630	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM980_17640	COG5002	protein histidine kinase activity
OM980_17645	COG0400	carboxylic ester hydrolase activity
OM980_17650	COG0346	lactoylglutathione lyase activity
OM980_17655	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OM980_17660	COG0069	glutamate synthase activity
OM980_17665	COG1902	pentaerythritol trinitrate reductase activity
OM980_17670	COG1329	Transcriptional regulator
OM980_17675	COG0010	Belongs to the arginase family
OM980_17700	COG2226	methyltransferase
OM980_17735	COG4846	Membrane protein involved in cytochrome C biogenesis
OM980_17740	COG0785	Cytochrome C biogenesis protein
OM980_17750	COG0583	DNA-binding transcription factor activity
OM980_17755	COG1380	Effector of murein hydrolase LrgA
OM980_17760	COG1346	cytolysis
OM980_17785	COG3409	Peptidoglycan-binding domain 1 protein
OM980_17785	COG5632	N-Acetylmuramoyl-L-alanine amidase
OM980_17800	COG1132	(ABC) transporter
OM980_17805	COG1132	(ABC) transporter
OM980_17835	COG3639	organic phosphonate transmembrane transporter activity
OM980_17840	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
OM980_17860	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
OM980_17880	COG1695	Transcriptional regulator
OM980_17925	COG1388	LysM domain
OM980_17925	COG3409	Peptidoglycan-binding domain 1 protein
OM980_17925	COG5632	N-Acetylmuramoyl-L-alanine amidase
OM980_17930	COG4824	toxin secretion phage lysis holin
OM980_18090	COG1595	DNA-templated transcription, initiation
OM980_18130	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
OM980_18210	COG1396	sequence-specific DNA binding
OM980_18235	COG0174	glutamine synthetase
OM980_18240	COG0789	Transcriptional regulator
OM980_18245	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
OM980_18255	COG2860	membrane
OM980_18260	COG0464	growth
OM980_18290	COG3584	3D domain protein
OM980_18290	COG1388	LysM domain
OM980_18295	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OM980_18295	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OM980_18295	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OM980_18300	COG1105	Belongs to the carbohydrate kinase PfkB family
OM980_18305	COG1349	DNA-binding transcription factor activity
OM980_18315	COG2322	membrane
OM980_18325	COG1113	amino acid transport
OM980_18340	COG1408	metallophosphoesterase
OM980_18345	COG2116	formate transmembrane transporter activity
OM980_18355	COG2217	Heavy metal translocating P-type atpase
OM980_18360	COG2608	mercury ion transmembrane transporter activity
OM980_18365	COG1937	Protein conserved in bacteria
OM980_18375	COG2819	hydrolase of the alpha beta superfamily
OM980_18380	COG1120	ATPase activity
OM980_18385	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM980_18390	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM980_18400	COG0708	Exodeoxyribonuclease III
OM980_18405	COG2169	Transcriptional regulator
OM980_18410	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
OM980_18415	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
OM980_18425	COG2364	Membrane
OM980_18440	COG2267	carboxylic ester hydrolase activity
OM980_18445	COG0346	lactoylglutathione lyase activity
OM980_18450	COG3300	MHYT domain
OM980_18450	COG5001	Diguanylate cyclase
OM980_18465	COG1346	cytolysis
OM980_18470	COG1380	Effector of murein hydrolase LrgA
OM980_18475	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OM980_18480	COG0508	dehydrogenase complex catalyzes the overall conversion of
OM980_18480	COG0596	Alpha beta hydrolase
OM980_18485	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
OM980_18505	COG1404	Belongs to the peptidase S8 family
OM980_18510	COG3773	Cell wall hydrolase
OM980_18515	COG0562	UDP-galactopyranose mutase
OM980_18520	COG1368	sulfuric ester hydrolase activity
OM980_18525	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
OM980_18535	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
OM980_18560	COG1131	(ABC) transporter
OM980_18580	COG4550	Control of competence regulator ComK, YlbF/YmcA
OM980_18585	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OM980_18590	COG1013	pyruvate-flavodoxin oxidoreductase activity
OM980_18595	COG0674	pyruvate-flavodoxin oxidoreductase activity
OM980_18595	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
OM980_18605	COG2359	stage V sporulation protein S
OM980_18610	COG1692	metallophosphoesterase
OM980_18635	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
OM980_18640	COG1426	Protein conserved in bacteria
OM980_18655	COG0300	oxidoreductase activity
OM980_18660	COG0612	Peptidase, M16
OM980_18665	COG0612	Peptidase, M16
OM980_18680	COG3845	ABC transporter
OM980_18685	COG1744	ABC transporter substrate-binding protein PnrA-like
OM980_18690	COG2188	Transcriptional regulator
OM980_18695	COG1674	ftsk spoiiie
OM980_18705	COG0740	serine-type endopeptidase activity
OM980_18710	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
OM980_18720	COG0527	aspartate kinase activity
OM980_18725	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
OM980_18730	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
OM980_18735	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
OM980_18740	COG1873	PFAM PRC-barrel domain
OM980_18745	COG0612	Peptidase, M16
OM980_18750	COG0726	polysaccharide deacetylase
OM980_18765	COG0196	riboflavin kinase activity
OM980_18770	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
OM980_18780	COG1550	Protein conserved in bacteria
OM980_18790	COG1358	cellular component organization or biogenesis
OM980_18795	COG2740	Nucleic-acid-binding protein implicated in transcription termination
OM980_18800	COG0195	Participates in both transcription termination and antitermination
OM980_18820	COG0750	zinc metalloprotease
OM980_18830	COG4589	Belongs to the CDS family
OM980_18835	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
OM980_18845	COG0528	UMP kinase activity
OM980_18875	COG4974	Belongs to the 'phage' integrase family
OM980_18885	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
OM980_18895	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
OM980_18935	COG1837	Belongs to the UPF0109 family
OM980_18945	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
OM980_18955	COG0552	protein localization to endoplasmic reticulum
OM980_18960	COG1196	nuclear chromosome segregation
OM980_18970	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OM980_18975	COG1028	Short-chain dehydrogenase reductase Sdr
OM980_18980	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
OM980_18995	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
OM980_19000	COG1461	Dihydroxyacetone kinase
OM980_19005	COG1302	Protein conserved in bacteria
OM980_19020	COG1564	THIamine pyrophosphokinase
OM980_19025	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
OM980_19030	COG1162	GTPase activity
OM980_19035	COG0515	serine threonine protein kinase
OM980_19035	COG2815	serine threonine protein kinase
OM980_19040	COG0631	protein serine/threonine phosphatase activity
OM980_19050	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
OM980_19050	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
OM980_19060	COG0242	peptide deformylase activity
OM980_19065	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
OM980_19070	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
OM980_19090	COG1561	YicC-like family, N-terminal region
OM980_19095	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
OM980_19105	COG0006	proline dipeptidase activity
OM980_19120	COG3069	C4-dicarboxylate transmembrane transporter activity
OM980_19185	COG0564	pseudouridine synthase activity
OM980_19205	COG3599	regulation of cell shape
OM980_19210	COG2302	S4 RNA-binding domain
OM980_19215	COG0762	integral membrane protein
OM980_19225	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
OM980_19230	COG1496	oxidoreductase activity
OM980_19235	COG1873	PFAM PRC-barrel domain
OM980_19240	COG1191	sigma factor activity
OM980_19245	COG1191	sigma factor activity
OM980_19255	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
OM980_19260	COG0849	cell division
OM980_19265	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
OM980_19270	COG0812	UDP-N-acetylmuramate dehydrogenase activity
OM980_19280	COG0772	Belongs to the SEDS family
OM980_19295	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
OM980_19300	COG0768	penicillin binding
OM980_19305	COG0768	penicillin binding
OM980_19310	COG4839	cell division protein FtsL
OM980_19325	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
OM980_19340	COG0333	Belongs to the bacterial ribosomal protein bL32 family
OM980_19345	COG1399	metal-binding, possibly nucleic acid-binding protein
OM980_19395	COG4824	toxin secretion phage lysis holin
OM980_19495	COG1802	Transcriptional regulator
OM980_19495	COG4626	Terminase
OM980_19520	COG0582	viral genome integration into host DNA
OM980_19585	COG0756	dUTP diphosphatase activity
OM980_19600	COG1191	sigma factor activity
OM980_19625	COG1484	DNA-dependent DNA replication
OM980_19655	COG1396	sequence-specific DNA binding
OM980_19670	COG1396	sequence-specific DNA binding
OM980_19690	COG0582	viral genome integration into host DNA
OM980_19700	COG3480	Lon protease (S16) C-terminal proteolytic domain
OM980_19705	COG1752	Esterase of the alpha-beta hydrolase superfamily
OM980_19710	COG3314	Sporulation integral membrane protein YlbJ
OM980_19720	COG0742	ribosomal rna small subunit methyltransferase
OM980_19735	COG3679	Belongs to the UPF0342 family
OM980_19740	COG0406	alpha-ribazole phosphatase activity
OM980_19755	COG2340	Cysteine-rich secretory protein family
OM980_19770	COG3336	cytochrome c oxidase
OM980_19805	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
OM980_19810	COG0772	Belongs to the SEDS family
OM980_19820	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
OM980_19825	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
OM980_19835	COG4896	Protein conserved in bacteria
OM980_19850	COG1217	gtp-binding protein TYPA
OM980_19860	COG0483	inositol monophosphate 1-phosphatase activity
OM980_19880	COG1982	Orn Lys Arg decarboxylase major
OM980_19925	COG0508	dehydrogenase complex catalyzes the overall conversion of
OM980_19930	COG0022	dehydrogenase e1 component
OM980_19935	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
OM980_19945	COG0242	peptide deformylase activity
OM980_19950	COG0561	phosphatase activity
OM980_19960	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
OM980_19965	COG0569	domain protein
OM980_19985	COG0583	DNA-binding transcription factor activity
OM980_19990	COG0517	IMP dehydrogenase activity
OM980_20000	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
OM980_20010	COG4703	Protein of unknown function (DUF1797)
OM980_20025	COG2200	EAL domain
OM980_20030	COG1028	Short-chain dehydrogenase reductase Sdr
OM980_20035	COG1408	metallophosphoesterase
OM980_20045	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
OM980_20080	COG2814	Major facilitator Superfamily
OM980_20100	COG3209	COG3209 Rhs family protein
OM980_20110	COG2205	protein histidine kinase activity
OM980_20120	COG0436	Aminotransferase
OM980_20125	COG1609	Transcriptional regulator
OM980_20130	COG3833	ABC-type maltose transport systems, permease component
OM980_20135	COG1175	transmembrane transport
OM980_20140	COG2182	Extracellular solute-binding protein
OM980_20150	COG0366	Alpha amylase catalytic
OM980_20155	COG3842	ATPase activity
OM980_20195	COG0183	Belongs to the thiolase family
OM980_20230	COG1695	Transcriptional regulator
OM980_20235	COG1028	Short-chain dehydrogenase reductase Sdr
OM980_20245	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
OM980_20255	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
OM980_20260	COG0436	Aminotransferase
OM980_20280	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
OM980_20300	COG2199	diguanylate cyclase activity
OM980_20305	COG0778	Nitroreductase
OM980_20330	COG2190	(PTS) system
OM980_20330	COG1263	PTS System
OM980_20330	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OM980_20335	COG3711	transcriptional antiterminator
OM980_20345	COG2188	Transcriptional regulator
OM980_20355	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
OM980_20380	COG1547	Domain of unknown function (DUF309)
OM980_20385	COG0456	acetyltransferase
OM980_20395	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
OM980_20400	COG4086	secreted protein
OM980_20405	COG0561	phosphatase activity
OM980_20410	COG0697	spore germination
OM980_20425	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM980_20450	COG0733	neurotransmitter:sodium symporter activity
OM980_20470	COG1686	Belongs to the peptidase S11 family
OM980_20475	COG1725	Transcriptional regulator
OM980_20480	COG1131	(ABC) transporter
OM980_20495	COG1846	Transcriptional regulator
OM980_20510	COG0598	Magnesium transport protein CorA
OM980_20535	COG4974	Belongs to the 'phage' integrase family
OM980_20545	COG0735	belongs to the Fur family
OM980_20550	COG1300	Membrane
OM980_20570	COG0667	Aldo Keto reductase
OM980_20575	COG0656	L-ascorbic acid biosynthetic process
OM980_20580	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
OM980_20580	COG0456	acetyltransferase
OM980_20590	COG1525	nuclease
OM980_20590	COG0737	Belongs to the 5'-nucleotidase family
OM980_20590	COG4085	toxin activity
OM980_20600	COG0596	Alpha beta hydrolase
OM980_20605	COG2056	Na+-H+ antiporter family
OM980_20610	COG1609	Transcriptional regulator
OM980_20615	COG0456	acetyltransferase
OM980_20620	COG1073	alpha beta
OM980_20635	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OM980_20635	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OM980_20640	COG0307	riboflavin synthase, alpha
OM980_20665	COG4106	trans-aconitate 2-methyltransferase activity
OM980_20670	COG2226	methyltransferase
OM980_20670	COG1073	alpha beta
OM980_20685	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
OM980_20695	COG1757	Na H antiporter
OM980_20700	COG0737	Belongs to the 5'-nucleotidase family
OM980_20710	COG1522	sequence-specific DNA binding
OM980_20730	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
OM980_20740	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
OM980_20755	COG0300	oxidoreductase activity
OM980_20765	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
OM980_20770	COG1760	l-serine dehydratase
OM980_20775	COG1760	l-serine dehydratase
OM980_20795	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
OM980_20805	COG2195	Cleaves the N-terminal amino acid of tripeptides
OM980_20810	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM980_20825	COG1376	ErfK ybiS ycfS ynhG family protein
OM980_20830	COG4129	membrane
OM980_20835	COG1126	abc transporter atp-binding protein
OM980_20840	COG0765	amino acid transport
OM980_20845	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OM980_20860	COG2816	NAD+ diphosphatase activity
OM980_20865	COG0772	Belongs to the SEDS family
OM980_20870	COG0508	dehydrogenase complex catalyzes the overall conversion of
OM980_20875	COG0022	dehydrogenase e1 component
OM980_20880	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
OM980_20885	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OM980_20900	COG0280	phosphate acetyltransferase
OM980_20905	COG3829	transcription factor binding
OM980_20905	COG3290	protein histidine kinase activity
OM980_20915	COG0584	glycerophosphoryl diester phosphodiesterase
OM980_20920	COG3093	addiction module antidote protein HigA
OM980_20930	COG0745	RESPONSE REGULATOR receiver
OM980_20935	COG0750	zinc metalloprotease
OM980_20940	COG0497	DNA recombination
OM980_20950	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
OM980_20960	COG0142	geranyltranstransferase activity
OM980_20985	COG1302	Protein conserved in bacteria
OM980_20990	COG0439	Biotin carboxylase
OM980_20995	COG0511	ligase activity, forming carbon-carbon bonds
OM980_21040	COG3854	ATPases associated with a variety of cellular activities
OM980_21065	COG0006	proline dipeptidase activity
OM980_21080	COG3872	metal-dependent enzyme
OM980_21090	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
OM980_21110	COG0095	Lipoate-protein ligase
OM980_21115	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OM980_21120	COG1609	Transcriptional regulator
OM980_21130	COG2076	Multidrug Resistance protein
OM980_21135	COG2076	Multidrug Resistance protein
OM980_21170	COG1131	(ABC) transporter
OM980_21175	COG1725	Transcriptional regulator
OM980_21205	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OM980_21265	COG4970	Tfp pilus assembly protein FimT
OM980_21275	COG1459	type II secretion system
OM980_21280	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
OM980_21330	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
OM980_21335	COG1410	methionine synthase
OM980_21335	COG0646	methionine synthase
OM980_21340	COG0646	methionine synthase
OM980_21340	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
OM980_21345	COG0626	cystathionine gamma-synthase activity
OM980_21350	COG0626	cystathionine gamma-synthase activity
OM980_21370	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM980_21380	COG1940	carbohydrate kinase activity
OM980_21385	COG4483	Protein conserved in bacteria
OM980_21390	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
OM980_21395	COG0267	Belongs to the bacterial ribosomal protein bL33 family
OM980_21400	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
OM980_21405	COG0704	Plays a role in the regulation of phosphate uptake
OM980_21415	COG0581	inorganic phosphate transmembrane transporter activity
OM980_21420	COG0573	inorganic phosphate transmembrane transporter activity
OM980_21425	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
OM980_21430	COG0768	penicillin binding
OM980_21435	COG0477	Major facilitator Superfamily
OM980_21440	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
OM980_21465	COG0735	belongs to the Fur family
OM980_21470	COG1108	ABC-type Mn2 Zn2 transport systems permease components
OM980_21475	COG1121	(ABC) transporter
OM980_21480	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM980_21510	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
OM980_21515	COG2384	SAM-dependent methyltransferase
OM980_21520	COG2010	Cytochrome c
OM980_21525	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OM980_21530	COG0358	DNA primase activity
OM980_21540	COG0517	IMP dehydrogenase activity
OM980_21555	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
OM980_21560	COG0295	cytidine deaminase activity
OM980_21565	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
OM980_21575	COG1480	7TM receptor with intracellular HD hydrolase
OM980_21580	COG1702	phosphate starvation-inducible protein PhoH
OM980_21595	COG1610	YqeY-like protein
OM980_21600	COG0828	Belongs to the bacterial ribosomal protein bS21 family
OM980_21605	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OM980_21610	COG1385	rRNA (uridine-N3-)-methyltransferase activity
OM980_21640	COG0635	Involved in the biosynthesis of porphyrin-containing compound
OM980_21645	COG1733	regulation of RNA biosynthetic process
OM980_21670	COG1466	dna polymerase III delta subunit
OM980_21680	COG0658	competence protein
OM980_21680	COG2333	competence protein COMEC
OM980_21685	COG2131	deaminase
OM980_21690	COG1555	photosystem II stabilization
OM980_21690	COG1596	polysaccharide export
OM980_21695	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
OM980_21700	COG2226	methyltransferase
OM980_21705	COG0799	negative regulation of ribosome biogenesis
OM980_21710	COG1713	HD superfamily hydrolase involved in NAD metabolism
OM980_21720	COG1534	Rna-binding protein
OM980_21730	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
OM980_21735	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
OM980_21760	COG1595	DNA-templated transcription, initiation
OM980_21770	COG0778	Nitroreductase
OM980_21775	COG2357	RelA SpoT domain protein
OM980_21785	COG1785	Belongs to the alkaline phosphatase family
OM980_21795	COG2267	carboxylic ester hydrolase activity
OM980_21830	COG1404	Belongs to the peptidase S8 family
OM980_21835	COG3186	Phenylalanine-4-hydroxylase
OM980_21850	COG2259	Doxx family
OM980_21890	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM980_21900	COG1012	belongs to the aldehyde dehydrogenase family
OM980_21900	COG1454	alcohol dehydrogenase
OM980_21905	COG0626	cystathionine gamma-synthase activity
OM980_21910	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
OM980_21935	COG0768	penicillin binding
OM980_21950	COG0826	peptidase U32
OM980_21955	COG0826	peptidase U32
OM980_21960	COG4122	O-methyltransferase activity
OM980_21965	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
OM980_21985	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
OM980_21995	COG0628	permease
OM980_22015	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
OM980_22025	COG0482	sulfurtransferase activity
OM980_22030	COG1104	cysteine desulfurase activity
OM980_22035	COG1959	2 iron, 2 sulfur cluster binding
OM980_22040	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
OM980_22050	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
OM980_22075	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
OM980_22085	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
OM980_22085	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
OM980_22090	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
OM980_22095	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OM980_22095	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OM980_22105	COG2244	polysaccharide biosynthetic process
OM980_22110	COG2323	membrane
OM980_22120	COG1862	Preprotein translocase
OM980_22150	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
OM980_22160	COG0697	spore germination
OM980_22165	COG0697	spore germination
OM980_22170	COG0640	Transcriptional regulator
OM980_22195	COG0157	Belongs to the NadC ModD family
OM980_22200	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
OM980_22205	COG1104	cysteine desulfurase activity
OM980_22210	COG1827	regulation of RNA biosynthetic process
OM980_22215	COG2258	MOSC domain
OM980_22220	COG0077	Prephenate dehydratase
OM980_22225	COG0577	efflux transmembrane transporter activity
OM980_22230	COG0577	efflux transmembrane transporter activity
OM980_22235	COG1136	(ABC) transporter
OM980_22245	COG0745	RESPONSE REGULATOR receiver
OM980_22250	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
OM980_22255	COG3290	protein histidine kinase activity
OM980_22265	COG2868	ribosomal protein
OM980_22275	COG1530	ribonuclease E activity
OM980_22280	COG1994	Peptidase M50
OM980_22285	COG0739	heme binding
OM980_22290	COG2894	cell division
OM980_22310	COG1077	Cell shape determining protein MreB Mrl
OM980_22330	COG0285	dihydrofolate synthase activity
OM980_22335	COG0525	valine-tRNA ligase activity
OM980_22345	COG1388	LysM domain
OM980_22355	COG0113	porphobilinogen synthase activity
OM980_22360	COG1587	Uroporphyrinogen-III synthase
OM980_22370	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
OM980_22380	COG1846	Transcriptional regulator
OM980_22385	COG1764	response to oxidative stress
OM980_22400	COG0470	DNA polymerase III
OM980_22400	COG1067	ATP-dependent peptidase activity
OM980_22445	COG0622	Phosphoesterase
OM980_22460	COG5401	PFAM Sporulation and spore germination
OM980_22480	COG1309	transcriptional regulator
OM980_22495	COG2197	response regulator
OM980_22500	COG2233	PERMEase
OM980_22510	COG0402	S-adenosylhomocysteine deaminase activity
OM980_22515	COG0402	S-adenosylhomocysteine deaminase activity
OM980_22525	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OM980_22535	COG0444	Belongs to the ABC transporter superfamily
OM980_22540	COG4608	Belongs to the ABC transporter superfamily
OM980_22545	COG3275	phosphorelay sensor kinase activity
OM980_22550	COG3279	Response regulator of the LytR AlgR family
OM980_22565	COG1983	PspC domain protein
OM980_22570	COG1396	sequence-specific DNA binding
OM980_22575	COG0697	spore germination
OM980_22585	COG1959	2 iron, 2 sulfur cluster binding
OM980_22590	COG1668	transmembrane transport
OM980_22595	COG4152	abc transporter atp-binding protein
OM980_22600	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
OM980_22610	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
OM980_22615	COG1876	peptidase activity
OM980_22620	COG0824	Thioesterase
OM980_22625	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
OM980_22630	COG1053	succinate dehydrogenase
OM980_22635	COG2009	succinate dehydrogenase
OM980_22640	COG1719	4-vinyl reductase, 4VR
OM980_22650	COG3118	belongs to the thioredoxin family
OM980_22655	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
OM980_22660	COG2086	electron transfer activity
OM980_22665	COG1024	Enoyl-CoA hydratase
OM980_22675	COG0318	PFAM AMP-dependent synthetase and ligase
OM980_22695	COG2318	DinB family
OM980_22725	COG1131	(ABC) transporter
OM980_22730	COG2205	protein histidine kinase activity
OM980_22735	COG0745	RESPONSE REGULATOR receiver
OM980_22745	COG4895	conserved protein (DUF2196)
OM980_22750	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
OM980_22765	COG4509	Sortase family
OM980_22770	COG1120	ATPase activity
OM980_22785	COG5386	Cell surface protein
OM980_22795	COG5386	Cell surface protein
OM980_22800	COG1114	Component of the transport system for branched-chain amino acids
OM980_22805	COG1187	pseudouridine synthase activity
OM980_22815	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
OM980_22815	COG1796	DNA polymerase
OM980_22820	COG1286	toxin biosynthetic process
OM980_22865	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OM980_22875	COG1418	mRNA catabolic process
OM980_22900	COG2814	Major facilitator Superfamily
OM980_22905	COG1566	PFAM secretion protein HlyD family protein
OM980_22910	COG1309	transcriptional regulator
OM980_22915	COG1363	Peptidase, m42
OM980_22940	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
OM980_22950	COG1484	DNA-dependent DNA replication
OM980_22955	COG3611	Membrane attachment protein
OM980_22965	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
OM980_22970	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
OM980_22975	COG0237	dephospho-CoA kinase activity
OM980_22980	COG1971	Probably functions as a manganese efflux pump
OM980_22990	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OM980_22990	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OM980_22995	COG5002	protein histidine kinase activity
OM980_23000	COG0745	RESPONSE REGULATOR receiver
OM980_23025	COG0538	isocitrate dehydrogenase activity
OM980_23030	COG0372	Belongs to the citrate synthase family
OM980_23040	COG0628	permease
OM980_23045	COG3030	protein affecting phage T7 exclusion by the F plasmid
OM980_23070	COG1725	Transcriptional regulator
OM980_23075	COG0281	malic enzyme
OM980_23080	COG0587	DNA-directed DNA polymerase activity
OM980_23095	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
OM980_23115	COG4109	DRTGG domain
OM980_23130	COG0006	proline dipeptidase activity
OM980_23170	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM980_23175	COG0662	Cupin 2, conserved barrel domain protein
OM980_23185	COG1476	TRANSCRIPTIONal
OM980_23200	COG1028	Short-chain dehydrogenase reductase Sdr
OM980_23205	COG0589	response to stress
OM980_23245	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM980_23265	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
OM980_23270	COG0827	DNA restriction-modification system
OM980_23275	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
OM980_23280	COG3874	Sporulation protein YtfJ
OM980_23295	COG1574	metal-dependent hydrolase with the TIM-barrel fold
OM980_23305	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OM980_23320	COG1104	cysteine desulfurase activity
OM980_23330	COG0583	DNA-binding transcription factor activity
OM980_23335	COG0697	spore germination
OM980_23345	COG1956	GAF domain-containing protein
OM980_23350	COG0626	cystathionine gamma-synthase activity
OM980_23380	COG1595	DNA-templated transcription, initiation
OM980_23390	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OM980_23395	COG0454	-acetyltransferase
OM980_23400	COG0517	IMP dehydrogenase activity
OM980_23405	COG0123	including yeast histone deacetylase and acetoin utilization protein
OM980_23415	COG0745	RESPONSE REGULATOR receiver
OM980_23425	COG0666	response to abiotic stimulus
OM980_23460	COG1609	Transcriptional regulator
OM980_23465	COG4851	CamS sex pheromone cAM373 precursor
OM980_23470	COG3118	belongs to the thioredoxin family
OM980_23480	COG2309	aminopeptidase activity
OM980_23500	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM980_23515	COG1674	ftsk spoiiie
OM980_23525	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OM980_23530	COG4848	Belongs to the UPF0354 family
OM980_23535	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OM980_23540	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
OM980_23545	COG1363	Peptidase, m42
OM980_23555	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM980_23570	COG0510	thiamine kinase activity
OM980_23575	COG1523	belongs to the glycosyl hydrolase 13 family
OM980_23590	COG1349	DNA-binding transcription factor activity
OM980_23595	COG1187	pseudouridine synthase activity
OM980_23600	COG2244	polysaccharide biosynthetic process
OM980_23605	COG2081	HI0933 family
OM980_23610	COG2814	Major facilitator Superfamily
OM980_23620	COG3832	glyoxalase III activity
OM980_23640	COG1329	Transcriptional regulator
OM980_23650	COG4975	Glucose uptake
OM980_23665	COG0314	molybdopterin synthase activity
OM980_23670	COG1763	Mo-molybdopterin cofactor biosynthetic process
OM980_23675	COG0303	'Molybdopterin
OM980_23685	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OM980_23710	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OM980_23720	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
OM980_23760	COG2814	Major facilitator Superfamily
OM980_23765	COG0475	glutathione-regulated potassium exporter activity
OM980_23770	COG0490	domain, Protein
OM980_23775	COG0582	viral genome integration into host DNA
OM980_23785	COG1136	(ABC) transporter
OM980_23805	COG1242	4 iron, 4 sulfur cluster binding
OM980_23810	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
OM980_23815	COG1131	(ABC) transporter
OM980_23825	COG1794	racemase activity, acting on amino acids and derivatives
OM980_23845	COG2267	carboxylic ester hydrolase activity
OM980_23850	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
OM980_23855	COG0671	phosphoesterase, PA-phosphatase related
OM980_23860	COG0438	transferase activity, transferring glycosyl groups
OM980_23870	COG0521	Mo-molybdopterin cofactor biosynthetic process
OM980_23925	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
OM980_23930	COG5002	protein histidine kinase activity
OM980_23935	COG4191	Histidine kinase
OM980_23940	COG2267	carboxylic ester hydrolase activity
OM980_23960	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
OM980_23965	COG1116	anion transmembrane transporter activity
OM980_23970	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OM980_23995	COG0494	nUDIX hydrolase
OM980_24030	COG0288	reversible hydration of carbon dioxide
OM980_24035	COG1271	oxidase subunit
OM980_24040	COG1294	oxidase, subunit
OM980_24060	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM980_24085	COG1842	Phage shock protein A
OM980_24115	COG5002	protein histidine kinase activity
OM980_24120	COG0745	RESPONSE REGULATOR receiver
OM980_24150	COG1597	lipid kinase activity
OM980_24185	COG0586	Pfam SNARE associated Golgi protein
OM980_24195	COG0577	efflux transmembrane transporter activity
OM980_24200	COG1136	(ABC) transporter
OM980_24205	COG2207	Transcriptional regulator
OM980_24205	COG3708	Transcriptional regulator
OM980_24210	COG0745	RESPONSE REGULATOR receiver
OM980_24215	COG2205	protein histidine kinase activity
OM980_24225	COG0577	efflux transmembrane transporter activity
OM980_24230	COG1136	(ABC) transporter
OM980_24250	COG2188	Transcriptional regulator
OM980_24270	COG3964	amidohydrolase
OM980_24300	COG4948	Mandelate Racemase Muconate Lactonizing
OM980_24310	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
OM980_24315	COG0596	Alpha beta hydrolase
OM980_24320	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
OM980_24325	COG1169	isochorismate synthase
OM980_24330	COG1575	Belongs to the MenA family. Type 1 subfamily
OM980_24335	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
OM980_24360	COG0058	SHG alpha-glucan phosphorylase activity
OM980_24365	COG0297	glycogen (starch) synthase activity
OM980_24370	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
OM980_24520	COG1285	pathogenesis
OM980_24525	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
OM980_24535	COG0166	Belongs to the GPI family
OM980_24540	COG2155	Conserved Protein
OM980_24545	COG1098	S1 RNA binding domain
OM980_24550	COG0436	Aminotransferase
OM980_24555	COG1522	sequence-specific DNA binding
OM980_24560	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
OM980_24565	COG2267	carboxylic ester hydrolase activity
OM980_24575	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
OM980_24595	COG5018	Exonuclease
OM980_24600	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
OM980_24620	COG2050	protein possibly involved in aromatic compounds catabolism
OM980_24630	COG1268	BioY protein
OM980_24640	COG1210	Utp--glucose-1-phosphate uridylyltransferase
OM980_24645	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
OM980_24660	COG3584	3D domain protein
OM980_24675	COG1252	NADH dehydrogenase
OM980_24690	COG3708	Transcriptional regulator
OM980_24705	COG1683	Conserved Protein
OM980_24725	COG0316	Belongs to the HesB IscA family
OM980_24740	COG1252	NADH dehydrogenase
OM980_24755	COG0390	transport system, permease component
OM980_24760	COG2824	Alkylphosphonate utilization operon protein PhnA
OM980_24800	COG4837	Protein of unknown function (DUF1462)
OM980_24805	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
OM980_24815	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
OM980_24820	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
OM980_24830	COG2249	NAD(P)H dehydrogenase (quinone) activity
OM980_24835	COG0647	UMP catabolic process
OM980_24845	COG2445	Protein of unknown function DUF86
OM980_24850	COG1494	fructose-1,6-bisphosphatase
OM980_24865	COG4470	Protein conserved in bacteria
OM980_24875	COG0789	Transcriptional regulator
OM980_24880	COG4377	Putative membrane peptidase family (DUF2324)
OM980_24905	COG0739	heme binding
OM980_24915	COG3377	Domain of unknown function (DUF1805)
OM980_24920	COG0737	Belongs to the 5'-nucleotidase family
OM980_24925	COG1695	Transcriptional regulator
OM980_24935	COG0719	Fe-S assembly protein
OM980_24940	COG0822	iron-sulfur transferase activity
OM980_24945	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
OM980_24950	COG0719	Fe-S assembly protein
OM980_24955	COG0396	ATPase activity
OM980_24960	COG1464	Belongs to the NlpA lipoprotein family
OM980_24965	COG1464	Belongs to the NlpA lipoprotein family
OM980_24970	COG2011	ABC-type metal ion transport system permease component
OM980_24975	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
OM980_24985	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OM980_24990	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
OM980_25000	COG1393	Belongs to the ArsC family
OM980_25045	COG0039	L-malate dehydrogenase activity
OM980_25070	COG1309	transcriptional regulator
OM980_25075	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OM980_25080	COG1960	acyl-CoA dehydrogenase activity
OM980_25085	COG0183	Belongs to the thiolase family
OM980_25090	COG1250	3-hydroxyacyl-CoA dehydrogenase
OM980_25090	COG1024	Enoyl-CoA hydratase
OM980_25100	COG1686	Belongs to the peptidase S11 family
OM980_25115	COG0011	TIGRFAM Protein of
OM980_25120	COG0840	transmembrane signaling receptor activity
OM980_25140	COG2814	Major facilitator Superfamily
OM980_25145	COG0531	amino acid
OM980_25155	COG0706	membrane insertase activity
OM980_25165	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OM980_25200	COG0586	Pfam SNARE associated Golgi protein
OM980_25210	COG1376	ErfK ybiS ycfS ynhG family protein
OM980_25215	COG0745	RESPONSE REGULATOR receiver
OM980_25220	COG5002	protein histidine kinase activity
OM980_25245	COG2151	metal-sulfur cluster biosynthetic enzyme
OM980_25250	COG3227	Zinc metalloprotease (Elastase)
OM980_25255	COG1741	Belongs to the pirin family
OM980_25270	COG0475	glutathione-regulated potassium exporter activity
OM980_25275	COG0490	domain, Protein
OM980_25280	COG1115	amino acid carrier protein
OM980_25285	COG0783	Belongs to the Dps family
OM980_25300	COG1611	Belongs to the LOG family
OM980_25320	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM980_25325	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM980_25330	COG1115	amino acid carrier protein
OM980_25335	COG1115	amino acid carrier protein
OM980_25340	COG2910	NAD(P)H-binding
OM980_25355	COG0656	L-ascorbic acid biosynthetic process
OM980_25360	COG2814	Major facilitator Superfamily
OM980_25365	COG1733	regulation of RNA biosynthetic process
OM980_25375	COG1252	NADH dehydrogenase
OM980_25380	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
OM980_25385	COG0812	UDP-N-acetylmuramate dehydrogenase activity
OM980_25395	COG0840	transmembrane signaling receptor activity
OM980_25395	COG3290	protein histidine kinase activity
OM980_25405	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
OM980_25410	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
OM980_25425	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OM980_25480	COG0557	exoribonuclease II activity
OM980_25485	COG1647	Serine aminopeptidase, S33
OM980_25490	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
OM980_25495	COG1346	cytolysis
OM980_25595	COG4695	Portal protein
OM980_25620	COG4974	Belongs to the 'phage' integrase family
OM980_25630	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
OM980_25635	COG0149	triose-phosphate isomerase activity
OM980_25645	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
OM980_25660	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
OM980_25685	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OM980_25700	COG2323	membrane
OM980_25705	COG0740	serine-type endopeptidase activity
OM980_25710	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
OM980_25720	COG0391	Required for morphogenesis under gluconeogenic growth conditions
OM980_25730	COG1051	belongs to the nudix hydrolase family
OM980_25740	COG0492	ferredoxin-NADP+ reductase activity
OM980_25745	COG0457	Tetratricopeptide repeat
OM980_25750	COG0110	maltose O-acetyltransferase activity
OM980_25770	COG1950	PFAM Membrane protein of
OM980_25780	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OM980_25785	COG0556	nucleotide-excision repair
OM980_25805	COG0789	Transcriptional regulator
OM980_25830	COG2855	membrane
OM980_25835	COG0583	DNA-binding transcription factor activity
OM980_25845	COG0655	NAD(P)H dehydrogenase (quinone) activity
OM980_25850	COG0488	(ABC) transporter
OM980_25860	COG1132	(ABC) transporter
OM980_25865	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OM980_25870	COG0793	Belongs to the peptidase S41A family
OM980_25870	COG3409	Peptidoglycan-binding domain 1 protein
OM980_25875	COG2177	Part of the ABC transporter FtsEX involved in
OM980_25880	COG2884	Cell division ATP-binding protein ftsE
OM980_25895	COG0653	protein targeting
OM980_25900	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
OM980_25905	COG1278	Cold shock
OM980_25910	COG1040	competence protein
OM980_25915	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
OM980_25920	COG0791	NLP P60 protein
OM980_25920	COG1388	LysM domain
OM980_25925	COG1733	regulation of RNA biosynthetic process
OM980_25930	COG1307	EDD domain protein, DegV family
OM980_25935	COG1739	Uncharacterized protein family UPF0029
OM980_25940	COG1316	TRANSCRIPTIONal
OM980_25945	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
OM980_25950	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
OM980_25955	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
OM980_25965	COG3933	PFAM sigma-54 factor interaction domain-containing protein
OM980_25965	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
OM980_25980	COG3394	polysaccharide catabolic process
OM980_25985	COG1486	melibiose metabolic process
OM980_25990	COG1447	Phosphotransferase system cellobiose-specific component IIA
OM980_25995	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
OM980_26005	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
OM980_26010	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
OM980_26015	COG1447	Phosphotransferase system cellobiose-specific component IIA
OM980_26025	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
OM980_26030	COG1301	dicarboxylic acid transport
OM980_26040	COG0346	lactoylglutathione lyase activity
OM980_26045	COG1511	domain protein
OM980_26050	COG0583	DNA-binding transcription factor activity
OM980_26055	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
OM980_26070	COG1271	oxidase subunit
OM980_26075	COG1294	oxidase, subunit
OM980_26080	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
OM980_26090	COG1620	l-lactate permease
OM980_26100	COG2389	metal-binding protein
OM980_26110	COG1368	sulfuric ester hydrolase activity
OM980_26125	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OM980_26145	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OM980_26150	COG3584	3D domain protein
OM980_26150	COG1388	LysM domain
OM980_26175	COG4715	Zinc finger, swim domain protein
OM980_26180	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OM980_26220	COG0577	efflux transmembrane transporter activity
OM980_26225	COG1136	(ABC) transporter
OM980_26260	COG5002	protein histidine kinase activity
OM980_26265	COG0745	RESPONSE REGULATOR receiver
OM980_26270	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
OM980_26290	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
OM980_26295	COG1134	teichoic acid transport
OM980_26300	COG1682	transport, permease protein
OM980_26305	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
OM980_26350	COG1609	Transcriptional regulator
OM980_26365	COG0739	heme binding
OM980_26385	COG2385	sporulation resulting in formation of a cellular spore
OM980_26400	COG4836	Membrane
OM980_26405	COG1007	ATP synthesis coupled electron transport
OM980_26410	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OM980_26415	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OM980_26425	COG0839	Belongs to the complex I subunit 6 family
OM980_26440	COG0649	NAD binding
OM980_26445	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OM980_26460	COG3300	MHYT domain
OM980_26460	COG5001	Diguanylate cyclase
OM980_26510	COG0356	it plays a direct role in the translocation of protons across the membrane
OM980_26545	COG0698	ribose 5-phosphate isomerase
OM980_26555	COG2190	(PTS) system
OM980_26560	COG2259	Doxx family
OM980_26565	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
OM980_26580	COG0009	L-threonylcarbamoyladenylate synthase
OM980_26595	COG2890	protein-(glutamine-N5) methyltransferase activity
OM980_26615	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
OM980_26620	COG1494	fructose-1,6-bisphosphatase
OM980_26635	COG4821	SIS domain
OM980_26645	COG3343	RNA polymerase activity
OM980_26655	COG1960	acyl-CoA dehydrogenase activity
OM980_26660	COG1960	acyl-CoA dehydrogenase activity
OM980_26665	COG1250	3-hydroxyacyl-CoA dehydrogenase
OM980_26670	COG0183	Belongs to the thiolase family
OM980_26675	COG0247	lactate metabolic process
OM980_26675	COG2181	nitrate reductase activity
OM980_26680	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
OM980_26690	COG5001	Diguanylate cyclase
OM980_26690	COG3300	MHYT domain
OM980_26710	COG2197	response regulator
OM980_26715	COG4585	Histidine kinase
OM980_26720	COG0842	Transport permease protein
OM980_26725	COG1131	(ABC) transporter
OM980_26730	COG0024	Methionine aminopeptidase
OM980_26740	COG2234	aminopeptidase activity
OM980_26760	COG1595	DNA-templated transcription, initiation
OM980_26765	COG0018	arginyl-trna synthetase
OM980_26770	COG4506	Protein conserved in bacteria
OM980_26775	COG1619	proteins homologs of microcin C7 resistance protein MccF
OM980_26790	COG0010	Belongs to the arginase family
OM980_26800	COG2814	Major facilitator Superfamily
OM980_26805	COG0789	Transcriptional regulator
OM980_26810	COG0584	glycerophosphoryl diester phosphodiesterase
OM980_26815	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OM980_26825	COG1994	Peptidase M50
OM980_26835	COG1078	dGTPase activity
OM980_26840	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OM980_26845	COG1120	ATPase activity
OM980_26850	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OM980_26875	COG0095	Lipoate-protein ligase
OM980_26880	COG0280	phosphate acetyltransferase
OM980_26895	COG3773	Cell wall hydrolase
OM980_26905	COG2363	Small membrane protein
OM980_26920	COG2233	PERMEase
OM980_26925	COG0561	phosphatase activity
OM980_26930	COG2814	Major facilitator Superfamily
OM980_26940	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
OM980_26945	COG1131	(ABC) transporter
OM980_26950	COG2755	lipolytic protein G-D-S-L family
OM980_26955	COG1609	Transcriptional regulator
OM980_26965	COG0460	homoserine dehydrogenase
OM980_26975	COG2873	o-acetylhomoserine
OM980_26985	COG1011	Hydrolase
OM980_26990	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
OM980_27000	COG2197	response regulator
OM980_27010	COG0351	phosphomethylpyrimidine kinase
OM980_27015	COG3706	GGDEF domain
OM980_27020	COG2879	small protein
OM980_27025	COG1966	Carbon starvation protein
OM980_27030	COG3279	Response regulator of the LytR AlgR family
OM980_27035	COG0477	Major facilitator Superfamily
OM980_27060	COG0840	transmembrane signaling receptor activity
OM980_27070	COG1607	acyl-coa hydrolase
OM980_27085	COG0488	(ABC) transporter
OM980_27105	COG0463	Glycosyl transferase, family 2
OM980_27110	COG1309	transcriptional regulator
OM980_27115	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OM980_27120	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OM980_27120	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OM980_27125	COG0628	permease
OM980_27140	COG3279	Response regulator of the LytR AlgR family
OM980_27145	COG3275	phosphorelay sensor kinase activity
OM980_27150	COG2814	Major facilitator Superfamily
OM980_27155	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OM980_27160	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
OM980_27165	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
OM980_27185	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
OM980_27190	COG1272	protein, Hemolysin III
OM980_27210	COG0516	GMP reductase activity
OM980_27215	COG1164	Oligoendopeptidase f
OM980_27235	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OM980_27240	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
OM980_27245	COG4853	Protein conserved in bacteria
OM980_27250	COG4863	YycH protein
OM980_27255	COG5002	protein histidine kinase activity
OM980_27260	COG0745	RESPONSE REGULATOR receiver
OM980_27290	COG0305	Participates in initiation and elongation during chromosome replication
OM980_27300	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
OM980_27305	COG4241	membrane
OM980_27315	COG0629	single-stranded DNA binding
OM980_27325	COG0012	GTP binding
OM980_27330	COG4481	Protein conserved in bacteria
OM980_27335	COG0668	transmembrane transport
OM980_27345	COG1475	DNA binding
OM980_27350	COG1192	Involved in chromosome partitioning
OM980_27375	COG1847	R3H domain protein
OM980_27380	COG0706	membrane insertase activity
OM980_27390	COG0230	Belongs to the bacterial ribosomal protein bL34 family
OM980_27400	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
OM980_27405	COG1210	Utp--glucose-1-phosphate uridylyltransferase
OM980_27425	COG0671	phosphoesterase, PA-phosphatase related
OM980_27430	COG4196	transglutaminase domain protein
OM980_27450	COG2311	Membrane
OM980_27585	COG4962	Type ii secretion system protein e
OM980_27790	COG3344	reverse transcriptase
OM980_27870	COG3344	reverse transcriptase
OM980_27975	COG0457	Tetratricopeptide repeat
OM980_28000	COG4974	Belongs to the 'phage' integrase family
OM980_28010	COG3443	Belongs to the bacterial solute-binding protein 9 family
OM980_28075	COG4974	Belongs to the 'phage' integrase family
OM980_28085	COG2002	toxin-antitoxin pair type II binding