locus-tag class description LKW29_00100 PF01709 Transcriptional regulator LKW29_00105 PF13344 Haloacid dehalogenase-like hydrolase LKW29_00105 PF00293 NUDIX domain LKW29_00110 PF00905 Penicillin binding protein transpeptidase domain LKW29_00110 PF00912 Transglycosylase LKW29_00115 PF13462 Thioredoxin LKW29_00125 PF08331 Domain of unknown function (DUF1730) LKW29_00130 PF12671 Putative amidase domain LKW29_00135 PF00588 SpoU rRNA Methylase family LKW29_00140 PF03707 Bacterial signalling protein N terminal repeat LKW29_00140 PF00990 Diguanylate cyclase, GGDEF domain LKW29_00140 PF00563 EAL domain LKW29_00145 PF08298 PrkA AAA domain LKW29_00145 PF06798 PrkA serine protein kinase C-terminal domain LKW29_00150 PF04285 Protein of unknown function (DUF444) LKW29_00165 PF02028 BCCT, betaine/carnitine/choline family transporter LKW29_00170 PF18496 Collagenase G catalytic helper subdomain LKW29_00170 PF01752 Collagenase LKW29_00170 PF08453 Peptidase family M9 N-terminal LKW29_00180 PF01145 SPFH domain / Band 7 family LKW29_00180 PF15975 Flotillin LKW29_00185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LKW29_00185 PF00672 HAMP domain LKW29_00185 PF02743 Cache domain LKW29_00190 PF00989 PAS fold LKW29_00190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_00190 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LKW29_00190 PF17203 Single cache domain 3 LKW29_00195 PF12431 Transcriptional regulator LKW29_00195 PF08279 HTH domain LKW29_00195 PF00072 Response regulator receiver domain LKW29_00200 PF03600 Citrate transporter LKW29_00220 PF04309 Glycerol-3-phosphate responsive antiterminator LKW29_00225 PF00005 ABC transporter LKW29_00225 PF17912 MalK OB fold domain LKW29_00230 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_00235 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_00240 PF13416 Bacterial extracellular solute-binding protein LKW29_00245 PF00149 Calcineurin-like phosphoesterase LKW29_00250 PF00486 Transcriptional regulatory protein, C terminal LKW29_00250 PF00072 Response regulator receiver domain LKW29_00255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_00255 PF00512 His Kinase A (phospho-acceptor) domain LKW29_00265 PF13529 Peptidase_C39 like family LKW29_00270 PF02743 Cache domain LKW29_00270 PF00672 HAMP domain LKW29_00270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LKW29_00275 PF17203 Single cache domain 3 LKW29_00275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_00275 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LKW29_00275 PF00989 PAS fold LKW29_00280 PF00072 Response regulator receiver domain LKW29_00285 PF03390 2-hydroxycarboxylate transporter family LKW29_00290 PF03949 Malic enzyme, NAD binding domain LKW29_00290 PF00390 Malic enzyme, N-terminal domain LKW29_00300 PF00892 EamA-like transporter family LKW29_00305 PF00392 Bacterial regulatory proteins, gntR family LKW29_00305 PF00155 Aminotransferase class I and II LKW29_00315 PF00512 His Kinase A (phospho-acceptor) domain LKW29_00315 PF00672 HAMP domain LKW29_00315 PF18698 Histidine kinase sensor domain LKW29_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_00315 PF00989 PAS fold LKW29_00320 PF00072 Response regulator receiver domain LKW29_00320 PF00486 Transcriptional regulatory protein, C terminal LKW29_00325 PF13508 Acetyltransferase (GNAT) domain LKW29_00325 PF00583 Acetyltransferase (GNAT) family LKW29_00330 PF02634 FdhD/NarQ family LKW29_00335 PF01568 Molydopterin dinucleotide binding domain LKW29_00335 PF00384 Molybdopterin oxidoreductase LKW29_00335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LKW29_00335 PF00037 4Fe-4S binding domain LKW29_00335 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LKW29_00350 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LKW29_00350 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LKW29_00355 PF13520 Amino acid permease LKW29_00360 PF01022 Bacterial regulatory protein, arsR family LKW29_00365 PF00403 Heavy-metal-associated domain LKW29_00370 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LKW29_00370 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LKW29_00370 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LKW29_00385 PF02868 Thermolysin metallopeptidase, alpha-helical domain LKW29_00385 PF01447 Thermolysin metallopeptidase, catalytic domain LKW29_00385 PF03413 Peptidase propeptide and YPEB domain LKW29_00385 PF07504 Fungalysin/Thermolysin Propeptide Motif LKW29_00405 PF04294 VanW like protein LKW29_00410 PF03816 Cell envelope-related transcriptional attenuator domain LKW29_00415 PF01773 Na+ dependent nucleoside transporter N-terminus LKW29_00415 PF07662 Na+ dependent nucleoside transporter C-terminus LKW29_00420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LKW29_00430 PF00206 Lyase LKW29_00430 PF10415 Fumarase C C-terminus LKW29_00435 PF02652 L-lactate permease LKW29_00440 PF01022 Bacterial regulatory protein, arsR family LKW29_00445 PF08141 Small acid-soluble spore protein H family LKW29_00450 PF00854 POT family LKW29_00455 PF01497 Periplasmic binding protein LKW29_00460 PF01032 FecCD transport family LKW29_00465 PF01032 FecCD transport family LKW29_00470 PF00005 ABC transporter LKW29_00475 PF08241 Methyltransferase domain LKW29_00480 PF00155 Aminotransferase class I and II LKW29_00485 PF01370 NAD dependent epimerase/dehydratase family LKW29_00490 PF00293 NUDIX domain LKW29_00490 PF13344 Haloacid dehalogenase-like hydrolase LKW29_00495 PF00092 von Willebrand factor type A domain LKW29_00500 PF07728 AAA domain (dynein-related subfamily) LKW29_00505 PF13091 PLD-like domain LKW29_00505 PF13396 Phospholipase_D-nuclease N-terminal LKW29_00520 PF00563 EAL domain LKW29_00520 PF00990 Diguanylate cyclase, GGDEF domain LKW29_00520 PF03707 Bacterial signalling protein N terminal repeat LKW29_00525 PF13520 Amino acid permease LKW29_00530 PF07702 UTRA domain LKW29_00530 PF00392 Bacterial regulatory proteins, gntR family LKW29_00535 PF00367 phosphotransferase system, EIIB LKW29_00535 PF02378 Phosphotransferase system, EIIC LKW29_00540 PF00128 Alpha amylase, catalytic domain LKW29_00540 PF16657 Maltogenic Amylase, C-terminal domain LKW29_00555 PF03323 Bacillus/Clostridium GerA spore germination protein LKW29_00565 PF01636 Phosphotransferase enzyme family LKW29_00570 PF01235 Sodium:alanine symporter family LKW29_00575 PF00005 ABC transporter LKW29_00580 PF00497 Bacterial extracellular solute-binding proteins, family 3 LKW29_00585 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_00590 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_00595 PF00324 Amino acid permease LKW29_00620 PF13280 WYL domain LKW29_00620 PF08279 HTH domain LKW29_00625 PF01872 RibD C-terminal domain LKW29_00630 PF00672 HAMP domain LKW29_00630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_00630 PF18698 Histidine kinase sensor domain LKW29_00630 PF00512 His Kinase A (phospho-acceptor) domain LKW29_00630 PF00989 PAS fold LKW29_00635 PF00486 Transcriptional regulatory protein, C terminal LKW29_00635 PF00072 Response regulator receiver domain LKW29_00645 PF01740 STAS domain LKW29_00645 PF00916 Sulfate permease family LKW29_00650 PF00582 Universal stress protein family LKW29_00660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_00665 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_00670 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_00675 PF00005 ABC transporter LKW29_00675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LKW29_00680 PF00005 ABC transporter LKW29_00680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LKW29_00685 PF07690 Major Facilitator Superfamily LKW29_00690 PF01047 MarR family LKW29_00700 PF00356 Bacterial regulatory proteins, lacI family LKW29_00705 PF00294 pfkB family carbohydrate kinase LKW29_00710 PF05025 RbsD / FucU transport protein family LKW29_00715 PF00005 ABC transporter LKW29_00725 PF13407 Periplasmic binding protein domain LKW29_00730 PF00923 Transaldolase/Fructose-6-phosphate aldolase LKW29_00735 PF05547 Immune inhibitor A peptidase M6 LKW29_00750 PF08240 Alcohol dehydrogenase GroES-like domain LKW29_00750 PF00107 Zinc-binding dehydrogenase LKW29_00760 PF00882 Zinc dependent phospholipase C LKW29_00765 PF03372 Endonuclease/Exonuclease/phosphatase family LKW29_00790 PF02673 Bacitracin resistance protein BacA LKW29_00795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LKW29_00795 PF00672 HAMP domain LKW29_00795 PF02743 Cache domain LKW29_00800 PF01476 LysM domain LKW29_00800 PF06725 3D domain LKW29_00805 PF01381 Helix-turn-helix LKW29_00815 PF04203 Sortase domain LKW29_00820 PF00854 POT family LKW29_00825 PF05525 Branched-chain amino acid transport protein LKW29_00840 PF00324 Amino acid permease LKW29_00845 PF00860 Permease family LKW29_00870 PF00999 Sodium/hydrogen exchanger family LKW29_00870 PF02254 TrkA-N domain LKW29_00870 PF02080 TrkA-C domain LKW29_00880 PF00510 Cytochrome c oxidase subunit III LKW29_00885 PF00115 Cytochrome C and Quinol oxidase polypeptide I LKW29_00890 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LKW29_00895 PF13529 Peptidase_C39 like family LKW29_00900 PF01546 Peptidase family M20/M25/M40 LKW29_00900 PF07687 Peptidase dimerisation domain LKW29_00905 PF11755 Protein of unknown function (DUF3311) LKW29_00910 PF00474 Sodium:solute symporter family LKW29_00915 PF03323 Bacillus/Clostridium GerA spore germination protein LKW29_00920 PF03845 Spore germination protein LKW29_00925 PF05504 Spore germination B3/ GerAC like, C-terminal LKW29_00930 PF02421 Ferrous iron transport protein B LKW29_00930 PF07670 Nucleoside recognition LKW29_00930 PF07664 Ferrous iron transport protein B C terminus LKW29_00930 PF17910 FeoB cytosolic helical domain LKW29_00935 PF07664 Ferrous iron transport protein B C terminus LKW29_00935 PF07670 Nucleoside recognition LKW29_00935 PF02421 Ferrous iron transport protein B LKW29_00935 PF17910 FeoB cytosolic helical domain LKW29_00940 PF07670 Nucleoside recognition LKW29_00940 PF07664 Ferrous iron transport protein B C terminus LKW29_00940 PF04023 FeoA domain LKW29_00940 PF02421 Ferrous iron transport protein B LKW29_00940 PF17910 FeoB cytosolic helical domain LKW29_00945 PF12849 PBP superfamily domain LKW29_00950 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_00955 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_00965 PF00873 AcrB/AcrD/AcrF family LKW29_01085 PF00571 CBS domain LKW29_01100 PF00246 Zinc carboxypeptidase LKW29_01100 PF08239 Bacterial SH3 domain LKW29_01105 PF03070 TENA/THI-4/PQQC family LKW29_01110 PF00005 ABC transporter LKW29_01115 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_01120 PF09084 NMT1/THI5 like LKW29_01125 PF02581 Thiamine monophosphate synthase LKW29_01130 PF01266 FAD dependent oxidoreductase LKW29_01135 PF02597 ThiS family LKW29_01140 PF05690 Thiazole biosynthesis protein ThiG LKW29_01145 PF00899 ThiF family LKW29_01150 PF08543 Phosphomethylpyrimidine kinase LKW29_01175 PF03814 Potassium-transporting ATPase A subunit LKW29_01185 PF02669 K+-transporting ATPase, c chain LKW29_01190 PF02702 Osmosensitive K+ channel His kinase sensor domain LKW29_01195 PF07690 Major Facilitator Superfamily LKW29_01200 PF01047 MarR family LKW29_01215 PF00860 Permease family LKW29_01225 PF17969 L,D-transpeptidase C-terminal domain LKW29_01225 PF03734 L,D-transpeptidase catalytic domain LKW29_01235 PF00294 pfkB family carbohydrate kinase LKW29_01240 PF00251 Glycosyl hydrolases family 32 N-terminal domain LKW29_01240 PF08244 Glycosyl hydrolases family 32 C terminal LKW29_01245 PF00367 phosphotransferase system, EIIB LKW29_01245 PF02378 Phosphotransferase system, EIIC LKW29_01250 PF13407 Periplasmic binding protein domain LKW29_01250 PF00356 Bacterial regulatory proteins, lacI family LKW29_01260 PF00085 Thioredoxin LKW29_01265 PF02600 Disulfide bond formation protein DsbB LKW29_01270 PF14148 YhdB-like protein LKW29_01290 PF03323 Bacillus/Clostridium GerA spore germination protein LKW29_01300 PF00881 Nitroreductase family LKW29_01305 PF04293 SpoVR like protein LKW29_01330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LKW29_01330 PF07992 Pyridine nucleotide-disulphide oxidoreductase LKW29_01335 PF02583 Metal-sensitive transcriptional repressor LKW29_01340 PF00581 Rhodanese-like domain LKW29_01340 PF01206 Sulfurtransferase TusA LKW29_01345 PF00581 Rhodanese-like domain LKW29_01345 PF00753 Metallo-beta-lactamase superfamily LKW29_01350 PF01206 Sulfurtransferase TusA LKW29_01365 PF13686 DsrE/DsrF/DrsH-like family LKW29_01370 PF01925 Sulfite exporter TauE/SafE LKW29_01380 PF03816 Cell envelope-related transcriptional attenuator domain LKW29_01385 PF08240 Alcohol dehydrogenase GroES-like domain LKW29_01385 PF00107 Zinc-binding dehydrogenase LKW29_01390 PF02690 Na+/Pi-cotransporter LKW29_01395 PF07690 Major Facilitator Superfamily LKW29_01405 PF00874 PRD domain LKW29_01405 PF05043 Mga helix-turn-helix domain LKW29_01405 PF08279 HTH domain LKW29_01405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LKW29_01410 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LKW29_01415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LKW29_01420 PF02378 Phosphotransferase system, EIIC LKW29_01435 PF06725 3D domain LKW29_01435 PF01476 LysM domain LKW29_01440 PF02687 FtsX-like permease family LKW29_01440 PF12704 MacB-like periplasmic core domain LKW29_01445 PF00005 ABC transporter LKW29_01455 PF09529 Integral membrane protein (intg_mem_TP0381) LKW29_01470 PF05525 Branched-chain amino acid transport protein LKW29_01475 PF05067 Manganese containing catalase LKW29_01480 PF12652 CotJB protein LKW29_01485 PF11007 Spore coat associated protein JA (CotJA) LKW29_01500 PF02735 Ku70/Ku80 beta-barrel domain LKW29_01510 PF09335 SNARE associated Golgi protein LKW29_01550 PF13520 Amino acid permease LKW29_01555 PF00999 Sodium/hydrogen exchanger family LKW29_01565 PF01418 Helix-turn-helix domain, rpiR family LKW29_01565 PF01380 SIS domain LKW29_01570 PF01380 SIS domain LKW29_01575 PF02378 Phosphotransferase system, EIIC LKW29_01575 PF00367 phosphotransferase system, EIIB LKW29_01585 PF07681 DoxX LKW29_01600 PF00892 EamA-like transporter family LKW29_01605 PF01037 Lrp/AsnC ligand binding domain LKW29_01615 PF00893 Small Multidrug Resistance protein LKW29_01620 PF00893 Small Multidrug Resistance protein LKW29_01625 PF00440 Bacterial regulatory proteins, tetR family LKW29_01625 PF17934 Tetracyclin repressor-like, C-terminal domain LKW29_01630 PF07690 Major Facilitator Superfamily LKW29_01635 PF01638 HxlR-like helix-turn-helix LKW29_01645 PF02525 Flavodoxin-like fold LKW29_01655 PF07690 Major Facilitator Superfamily LKW29_01665 PF01965 DJ-1/PfpI family LKW29_01670 PF00199 Catalase LKW29_01670 PF18011 C-terminal domain found in long catalases LKW29_01670 PF06628 Catalase-related immune-responsive LKW29_01680 PF13520 Amino acid permease LKW29_01685 PF01177 Asp/Glu/Hydantoin racemase LKW29_01695 PF00171 Aldehyde dehydrogenase family LKW29_01700 PF00664 ABC transporter transmembrane region LKW29_01700 PF00005 ABC transporter LKW29_01710 PF00497 Bacterial extracellular solute-binding proteins, family 3 LKW29_01715 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_01720 PF00005 ABC transporter LKW29_01725 PF00269 Small, acid-soluble spore proteins, alpha/beta type LKW29_01735 PF14398 YheC/D like ATP-grasp LKW29_01745 PF04286 Protein of unknown function (DUF445) LKW29_01750 PF06133 Control of competence regulator ComK, YlbF/YmcA LKW29_01765 PF00205 Thiamine pyrophosphate enzyme, central domain LKW29_01765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LKW29_01765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LKW29_01770 PF03306 Alpha-acetolactate decarboxylase LKW29_01780 PF02245 Methylpurine-DNA glycosylase (MPG) LKW29_01800 PF04055 Radical SAM superfamily LKW29_01805 PF13193 AMP-binding enzyme C-terminal domain LKW29_01805 PF00501 AMP-binding enzyme LKW29_01815 PF01740 STAS domain LKW29_01815 PF00916 Sulfate permease family LKW29_01835 PF07517 SecA DEAD-like domain LKW29_01835 PF07516 SecA Wing and Scaffold domain LKW29_01835 PF01043 SecA preprotein cross-linking domain LKW29_01840 PF14667 Polysaccharide biosynthesis C-terminal domain LKW29_01840 PF01943 Polysaccharide biosynthesis protein LKW29_01850 PF13205 Bacterial Ig-like domain LKW29_01850 PF00395 S-layer homology domain LKW29_01850 PF02368 Bacterial Ig-like domain (group 2) LKW29_01855 PF00395 S-layer homology domain LKW29_01865 PF03062 MBOAT, membrane-bound O-acyltransferase family LKW29_01870 PF03062 MBOAT, membrane-bound O-acyltransferase family LKW29_01885 PF00378 Enoyl-CoA hydratase/isomerase LKW29_01900 PF05343 M42 glutamyl aminopeptidase LKW29_01905 PF01520 N-acetylmuramoyl-L-alanine amidase LKW29_01905 PF00395 S-layer homology domain LKW29_01920 PF05544 Proline racemase LKW29_01925 PF02423 Ornithine cyclodeaminase/mu-crystallin family LKW29_01955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_01960 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_01965 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_01965 PF12911 N-terminal TM domain of oligopeptide transport permease C LKW29_01975 PF00005 ABC transporter LKW29_01975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LKW29_02010 PF00083 Sugar (and other) transporter LKW29_02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_02015 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LKW29_02020 PF08279 HTH domain LKW29_02020 PF00072 Response regulator receiver domain LKW29_02020 PF12431 Transcriptional regulator LKW29_02025 PF03401 Tripartite tricarboxylate transporter family receptor LKW29_02030 PF02342 TerD domain LKW29_02055 PF06445 GyrI-like small molecule binding domain LKW29_02055 PF13411 MerR HTH family regulatory protein LKW29_02070 PF00772 DnaB-like helicase N terminal domain LKW29_02070 PF03796 DnaB-like helicase C terminal domain LKW29_02095 PF01925 Sulfite exporter TauE/SafE LKW29_02110 PF07690 Major Facilitator Superfamily LKW29_02160 PF18665 Tetracyclin repressor-like, C-terminal domain LKW29_02160 PF00440 Bacterial regulatory proteins, tetR family LKW29_02180 PF01066 CDP-alcohol phosphatidyltransferase LKW29_02200 PF02733 Dak1 domain LKW29_02210 PF02733 Dak1 domain LKW29_02215 PF02525 Flavodoxin-like fold LKW29_02220 PF02082 Transcriptional regulator LKW29_02250 PF01966 HD domain LKW29_02250 PF00672 HAMP domain LKW29_02270 PF00395 S-layer homology domain LKW29_02295 PF11181 Heat induced stress protein YflT LKW29_02300 PF05532 CsbD-like LKW29_02315 PF01740 STAS domain LKW29_02320 PF13581 Histidine kinase-like ATPase domain LKW29_02325 PF04545 Sigma-70, region 4 LKW29_02325 PF04542 Sigma-70 region 2 LKW29_02325 PF04539 Sigma-70 region 3 LKW29_02335 PF13426 PAS domain LKW29_02335 PF07228 Stage II sporulation protein E (SpoIIE) LKW29_02340 PF03705 CheR methyltransferase, all-alpha domain LKW29_02340 PF01739 CheR methyltransferase, SAM binding domain LKW29_02345 PF00072 Response regulator receiver domain LKW29_02345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_02345 PF00512 His Kinase A (phospho-acceptor) domain LKW29_02345 PF01627 Hpt domain LKW29_02345 PF00497 Bacterial extracellular solute-binding proteins, family 3 LKW29_02370 PF01906 Putative heavy-metal-binding LKW29_02380 PF00107 Zinc-binding dehydrogenase LKW29_02380 PF08240 Alcohol dehydrogenase GroES-like domain LKW29_02385 PF11121 Protein of unknown function (DUF2639) LKW29_02400 PF00149 Calcineurin-like phosphoesterase LKW29_02410 PF01385 Probable transposase LKW29_02410 PF07282 Putative transposase DNA-binding domain LKW29_02410 PF12323 Helix-turn-helix domain LKW29_02420 PF01336 OB-fold nucleic acid binding domain LKW29_02420 PF01966 HD domain LKW29_02425 PF00440 Bacterial regulatory proteins, tetR family LKW29_02430 PF07690 Major Facilitator Superfamily LKW29_02435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LKW29_02440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LKW29_02445 PF18801 response regulator aspartate phosphatase H, N terminal LKW29_02450 PF00561 alpha/beta hydrolase fold LKW29_02450 PF08386 TAP-like protein LKW29_02470 PF04309 Glycerol-3-phosphate responsive antiterminator LKW29_02475 PF00230 Major intrinsic protein LKW29_02480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LKW29_02480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LKW29_02485 PF01266 FAD dependent oxidoreductase LKW29_02485 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LKW29_02500 PF04542 Sigma-70 region 2 LKW29_02500 PF08281 Sigma-70, region 4 LKW29_02525 PF07690 Major Facilitator Superfamily LKW29_02530 PF07690 Major Facilitator Superfamily LKW29_02540 PF13538 UvrD-like helicase C-terminal domain LKW29_02560 PF01047 MarR family LKW29_02565 PF12732 YtxH-like protein LKW29_02570 PF01230 HIT domain LKW29_02575 PF00005 ABC transporter LKW29_02580 PF05975 Bacterial ABC transporter protein EcsB LKW29_02585 PF12787 EcsC protein family LKW29_02595 PF17934 Tetracyclin repressor-like, C-terminal domain LKW29_02595 PF00440 Bacterial regulatory proteins, tetR family LKW29_02605 PF03703 Bacterial PH domain LKW29_02650 PF03703 Bacterial PH domain LKW29_02655 PF03703 Bacterial PH domain LKW29_02660 PF03992 Antibiotic biosynthesis monooxygenase LKW29_02665 PF00912 Transglycosylase LKW29_02665 PF00905 Penicillin binding protein transpeptidase domain LKW29_02670 PF01208 Uroporphyrinogen decarboxylase (URO-D) LKW29_02675 PF00762 Ferrochelatase LKW29_02680 PF01593 Flavin containing amine oxidoreductase LKW29_02705 PF03965 Penicillinase repressor LKW29_02715 PF17932 Tetracyclin repressor-like, C-terminal domain LKW29_02715 PF00440 Bacterial regulatory proteins, tetR family LKW29_02745 PF00356 Bacterial regulatory proteins, lacI family LKW29_02750 PF14149 YhfH-like protein LKW29_02755 PF12706 Beta-lactamase superfamily domain LKW29_02760 PF03099 Biotin/lipoate A/B protein ligase family LKW29_02760 PF10437 Bacterial lipoate protein ligase C-terminus LKW29_02770 PF13193 AMP-binding enzyme C-terminal domain LKW29_02770 PF00501 AMP-binding enzyme LKW29_02780 PF00395 S-layer homology domain LKW29_02780 PF01520 N-acetylmuramoyl-L-alanine amidase LKW29_02785 PF05593 RHS Repeat LKW29_02800 PF05593 RHS Repeat LKW29_02840 PF01966 HD domain LKW29_02850 PF04542 Sigma-70 region 2 LKW29_02850 PF08281 Sigma-70, region 4 LKW29_02855 PF06445 GyrI-like small molecule binding domain LKW29_02855 PF12833 Helix-turn-helix domain LKW29_02870 PF00512 His Kinase A (phospho-acceptor) domain LKW29_02870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_02875 PF00072 Response regulator receiver domain LKW29_02875 PF00486 Transcriptional regulatory protein, C terminal LKW29_02900 PF01435 Peptidase family M48 LKW29_02900 PF16491 CAAX prenyl protease N-terminal, five membrane helices LKW29_02905 PF02743 Cache domain LKW29_02905 PF00672 HAMP domain LKW29_02905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LKW29_02910 PF00892 EamA-like transporter family LKW29_02915 PF00395 S-layer homology domain LKW29_02915 PF00150 Cellulase (glycosyl hydrolase family 5) LKW29_02915 PF03424 Carbohydrate binding domain (family 17/28) LKW29_02925 PF00395 S-layer homology domain LKW29_02930 PF01274 Malate synthase LKW29_02935 PF00463 Isocitrate lyase family LKW29_02945 PF00313 'Cold-shock' DNA-binding domain LKW29_02960 PF06338 ComK protein LKW29_02965 PF09335 SNARE associated Golgi protein LKW29_02970 PF10502 Signal peptidase, peptidase S26 LKW29_02975 PF13361 UvrD-like helicase C-terminal domain LKW29_02975 PF12705 PD-(D/E)XK nuclease superfamily LKW29_02980 PF13361 UvrD-like helicase C-terminal domain LKW29_02980 PF00580 UvrD/REP helicase N-terminal domain LKW29_02980 PF12705 PD-(D/E)XK nuclease superfamily LKW29_02990 PF10676 Spore germination protein gerPA/gerPF LKW29_02995 PF10970 Spore germination protein GerPE LKW29_03005 PF10737 Spore germination protein GerPC LKW29_03010 PF10803 Spore germination GerPB LKW29_03015 PF10676 Spore germination protein gerPA/gerPF LKW29_03025 PF01557 Fumarylacetoacetate (FAA) hydrolase family LKW29_03035 PF00202 Aminotransferase class-III LKW29_03040 PF07457 Protein of unknown function (DUF1516) LKW29_03050 PF13537 Glutamine amidotransferase domain LKW29_03050 PF00733 Asparagine synthase LKW29_03055 PF00762 Ferrochelatase LKW29_03060 PF00199 Catalase LKW29_03060 PF06628 Catalase-related immune-responsive LKW29_03065 PF00909 Ammonium Transporter Family LKW29_03070 PF00128 Alpha amylase, catalytic domain LKW29_03080 PF04461 Protein of unknown function (DUF520) LKW29_03085 PF13509 S1 domain LKW29_03085 PF17783 CvfB-like winged helix domain LKW29_03095 PF00639 PPIC-type PPIASE domain LKW29_03105 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LKW29_03105 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LKW29_03110 PF12758 Protein of unknown function (DUF3813) LKW29_03125 PF14168 YjzC-like protein LKW29_03130 PF00004 ATPase family associated with various cellular activities (AAA) LKW29_03130 PF07724 AAA domain (Cdc48 subfamily) LKW29_03130 PF17871 AAA lid domain LKW29_03130 PF02861 Clp amino terminal domain, pathogenicity island component LKW29_03130 PF10431 C-terminal, D2-small domain, of ClpB protein LKW29_03150 PF10815 ComZ LKW29_03155 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LKW29_03155 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LKW29_03160 PF02801 Beta-ketoacyl synthase, C-terminal domain LKW29_03160 PF00109 Beta-ketoacyl synthase, N-terminal domain LKW29_03165 PF10026 Predicted Zn-dependent protease (DUF2268) LKW29_03170 PF12227 Protein of unknown function (DUF3603) LKW29_03175 PF00579 tRNA synthetases class I (W and Y) LKW29_03185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_03190 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_03195 PF12911 N-terminal TM domain of oligopeptide transport permease C LKW29_03195 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_03200 PF00005 ABC transporter LKW29_03200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LKW29_03205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LKW29_03205 PF00005 ABC transporter LKW29_03210 PF01554 MatE LKW29_03215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_03225 PF03960 ArsC family LKW29_03230 PF03741 Integral membrane protein TerC family LKW29_03235 PF05389 Negative regulator of genetic competence (MecA) LKW29_03240 PF13091 PLD-like domain LKW29_03240 PF13396 Phospholipase_D-nuclease N-terminal LKW29_03250 PF01432 Peptidase family M3 LKW29_03250 PF08439 Oligopeptidase F LKW29_03265 PF01152 Bacterial-like globin LKW29_03270 PF01928 CYTH domain LKW29_03280 PF04607 Region found in RelA / SpoT proteins LKW29_03285 PF01513 ATP-NAD kinase LKW29_03290 PF00849 RNA pseudouridylate synthase LKW29_03300 PF00149 Calcineurin-like phosphoesterase LKW29_03310 PF00535 Glycosyl transferase family 2 LKW29_03315 PF08241 Methyltransferase domain LKW29_03320 PF05711 Macrocin-O-methyltransferase (TylF) LKW29_03350 PF00483 Nucleotidyl transferase LKW29_03355 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LKW29_03360 PF16363 GDP-mannose 4,6 dehydratase LKW29_03365 PF04321 RmlD substrate binding domain LKW29_03385 PF07098 Protein of unknown function (DUF1360) LKW29_03405 PF00580 UvrD/REP helicase N-terminal domain LKW29_03405 PF13361 UvrD-like helicase C-terminal domain LKW29_03410 PF13673 Acetyltransferase (GNAT) domain LKW29_03420 PF00756 Putative esterase LKW29_03435 PF02368 Bacterial Ig-like domain (group 2) LKW29_03440 PF00474 Sodium:solute symporter family LKW29_03445 PF04715 Anthranilate synthase component I, N terminal region LKW29_03445 PF00425 chorismate binding enzyme LKW29_03450 PF00117 Glutamine amidotransferase class-I LKW29_03450 PF02885 Glycosyl transferase family, helical bundle domain LKW29_03450 PF00591 Glycosyl transferase family, a/b domain LKW29_03455 PF02885 Glycosyl transferase family, helical bundle domain LKW29_03455 PF00591 Glycosyl transferase family, a/b domain LKW29_03465 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LKW29_03470 PF00291 Pyridoxal-phosphate dependent enzyme LKW29_03485 PF02652 L-lactate permease LKW29_03490 PF10042 Uncharacterized conserved protein (DUF2278) LKW29_03515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LKW29_03515 PF07992 Pyridine nucleotide-disulphide oxidoreductase LKW29_03545 PF00364 Biotin-requiring enzyme LKW29_03545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LKW29_03545 PF02817 e3 binding domain LKW29_03550 PF16870 2-oxoglutarate dehydrogenase C-terminal LKW29_03550 PF02779 Transketolase, pyrimidine binding domain LKW29_03550 PF00676 Dehydrogenase E1 component LKW29_03555 PF01381 Helix-turn-helix LKW29_03615 PF13649 Methyltransferase domain LKW29_03625 PF00768 D-alanyl-D-alanine carboxypeptidase LKW29_03625 PF07943 Penicillin-binding protein 5, C-terminal domain LKW29_03635 PF12389 Camelysin metallo-endopeptidase LKW29_03650 PF08671 Anti-repressor SinI LKW29_03650 PF01381 Helix-turn-helix LKW29_03660 PF05547 Immune inhibitor A peptidase M6 LKW29_03665 PF00171 Aldehyde dehydrogenase family LKW29_03670 PF00005 ABC transporter LKW29_03670 PF08402 TOBE domain LKW29_03675 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_03680 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_03685 PF13416 Bacterial extracellular solute-binding protein LKW29_03695 PF03176 MMPL family LKW29_03705 PF01479 S4 domain LKW29_03705 PF00849 RNA pseudouridylate synthase LKW29_03715 PF00188 Cysteine-rich secretory protein family LKW29_03720 PF13183 4Fe-4S dicluster domain LKW29_03720 PF02754 Cysteine-rich domain LKW29_03725 PF02913 FAD linked oxidases, C-terminal domain LKW29_03725 PF01565 FAD binding domain LKW29_03730 PF17853 GGDEF-like domain LKW29_03730 PF13556 PucR C-terminal helix-turn-helix domain LKW29_03730 PF05651 Putative sugar diacid recognition LKW29_03740 PF00072 Response regulator receiver domain LKW29_03740 PF00486 Transcriptional regulatory protein, C terminal LKW29_03745 PF00989 PAS fold LKW29_03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_03745 PF18698 Histidine kinase sensor domain LKW29_03745 PF00512 His Kinase A (phospho-acceptor) domain LKW29_03745 PF00672 HAMP domain LKW29_03750 PF07729 FCD domain LKW29_03750 PF00392 Bacterial regulatory proteins, gntR family LKW29_03755 PF02754 Cysteine-rich domain LKW29_03765 PF02589 LUD domain LKW29_03770 PF01478 Type IV leader peptidase family LKW29_03770 PF06750 Bacterial Peptidase A24 N-terminal domain LKW29_03780 PF01226 Formate/nitrite transporter LKW29_03785 PF03741 Integral membrane protein TerC family LKW29_03795 PF00269 Small, acid-soluble spore proteins, alpha/beta type LKW29_03800 PF01575 MaoC like domain LKW29_03825 PF00561 alpha/beta hydrolase fold LKW29_03830 PF01266 FAD dependent oxidoreductase LKW29_03835 PF02386 Cation transport protein LKW29_03865 PF13419 Haloacid dehalogenase-like hydrolase LKW29_03870 PF00266 Aminotransferase class-V LKW29_03880 PF00455 DeoR C terminal sensor domain LKW29_03880 PF08220 DeoR-like helix-turn-helix domain LKW29_03900 PF04748 Divergent polysaccharide deacetylase LKW29_03905 PF09388 Spo0E like sporulation regulatory protein LKW29_03910 PF02743 Cache domain LKW29_03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_03910 PF00512 His Kinase A (phospho-acceptor) domain LKW29_03915 PF01047 MarR family LKW29_03925 PF12867 DinB superfamily LKW29_03935 PF00512 His Kinase A (phospho-acceptor) domain LKW29_03935 PF00989 PAS fold LKW29_03935 PF13188 PAS domain LKW29_03935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_03935 PF13426 PAS domain LKW29_03940 PF06508 Queuosine biosynthesis protein QueC LKW29_03945 PF01242 6-pyruvoyl tetrahydropterin synthase LKW29_03950 PF04055 Radical SAM superfamily LKW29_03955 PF14489 QueF-like protein LKW29_03960 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) LKW29_03990 PF07972 NrdI Flavodoxin like LKW29_04010 PF00268 Ribonucleotide reductase, small chain LKW29_04015 PF00392 Bacterial regulatory proteins, gntR family LKW29_04020 PF00005 ABC transporter LKW29_04030 PF00005 ABC transporter LKW29_04050 PF01037 Lrp/AsnC ligand binding domain LKW29_04060 PF00857 Isochorismatase family LKW29_04070 PF02016 LD-carboxypeptidase N-terminal domain LKW29_04070 PF17676 LD-carboxypeptidase C-terminal domain LKW29_04075 PF03060 Nitronate monooxygenase LKW29_04080 PF04914 DltD protein LKW29_04085 PF00550 Phosphopantetheine attachment site LKW29_04090 PF03062 MBOAT, membrane-bound O-acyltransferase family LKW29_04095 PF13193 AMP-binding enzyme C-terminal domain LKW29_04095 PF00501 AMP-binding enzyme LKW29_04105 PF01546 Peptidase family M20/M25/M40 LKW29_04105 PF07687 Peptidase dimerisation domain LKW29_04115 PF00258 Flavodoxin LKW29_04130 PF01636 Phosphotransferase enzyme family LKW29_04150 PF01554 MatE LKW29_04155 PF02673 Bacitracin resistance protein BacA LKW29_04170 PF01047 MarR family LKW29_04180 PF00375 Sodium:dicarboxylate symporter family LKW29_04195 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LKW29_04205 PF03698 Uncharacterised protein family (UPF0180) LKW29_04215 PF01063 Amino-transferase class IV LKW29_04220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LKW29_04220 PF00205 Thiamine pyrophosphate enzyme, central domain LKW29_04220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LKW29_04225 PF01842 ACT domain LKW29_04225 PF10369 Small subunit of acetolactate synthase LKW29_04230 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LKW29_04230 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LKW29_04235 PF00682 HMGL-like LKW29_04235 PF08502 LeuA allosteric (dimerisation) domain LKW29_04240 PF00180 Isocitrate/isopropylmalate dehydrogenase LKW29_04245 PF00330 Aconitase family (aconitate hydratase) LKW29_04250 PF00694 Aconitase C-terminal domain LKW29_04255 PF13393 Histidyl-tRNA synthetase LKW29_04260 PF01634 ATP phosphoribosyltransferase LKW29_04265 PF00815 Histidinol dehydrogenase LKW29_04270 PF00475 Imidazoleglycerol-phosphate dehydratase LKW29_04275 PF00117 Glutamine amidotransferase class-I LKW29_04280 PF00977 Histidine biosynthesis protein LKW29_04285 PF00977 Histidine biosynthesis protein LKW29_04290 PF01502 Phosphoribosyl-AMP cyclohydrolase LKW29_04295 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LKW29_04300 PF02811 PHP domain LKW29_04310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LKW29_04310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LKW29_04315 PF01066 CDP-alcohol phosphatidyltransferase LKW29_04320 PF00884 Sulfatase LKW29_04330 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LKW29_04330 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LKW29_04340 PF01507 Phosphoadenosine phosphosulfate reductase family LKW29_04345 PF14306 PUA-like domain LKW29_04345 PF01747 ATP-sulfurylase LKW29_04355 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LKW29_04355 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LKW29_04365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LKW29_04370 PF01903 CbiX LKW29_04380 PF00209 Sodium:neurotransmitter symporter family LKW29_04390 PF00375 Sodium:dicarboxylate symporter family LKW29_04400 PF03553 Na+/H+ antiporter family LKW29_04415 PF09922 Cell wall-active antibiotics response 4TMS YvqF LKW29_04420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_04420 PF00672 HAMP domain LKW29_04420 PF07730 Histidine kinase LKW29_04425 PF00196 Bacterial regulatory proteins, luxR family LKW29_04425 PF00072 Response regulator receiver domain LKW29_04435 PF05525 Branched-chain amino acid transport protein LKW29_04445 PF08241 Methyltransferase domain LKW29_04470 PF00970 Oxidoreductase FAD-binding domain LKW29_04470 PF00042 Globin LKW29_04470 PF00175 Oxidoreductase NAD-binding domain LKW29_04485 PF01925 Sulfite exporter TauE/SafE LKW29_04490 PF01384 Phosphate transporter family LKW29_04495 PF01865 Protein of unknown function DUF47 LKW29_04520 PF01904 Protein of unknown function DUF72 LKW29_04530 PF00589 Phage integrase family LKW29_04535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_04535 PF00512 His Kinase A (phospho-acceptor) domain LKW29_04535 PF00989 PAS fold LKW29_04535 PF16736 Single Cache-like LKW29_04540 PF01048 Phosphorylase superfamily LKW29_04570 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LKW29_04570 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LKW29_04575 PF00768 D-alanyl-D-alanine carboxypeptidase LKW29_04575 PF07943 Penicillin-binding protein 5, C-terminal domain LKW29_04580 PF07670 Nucleoside recognition LKW29_04585 PF07670 Nucleoside recognition LKW29_04590 PF01479 S4 domain LKW29_04590 PF00849 RNA pseudouridylate synthase LKW29_04595 PF00578 AhpC/TSA family LKW29_04600 PF05140 ResB-like family LKW29_04605 PF01578 Cytochrome C assembly protein LKW29_04610 PF00072 Response regulator receiver domain LKW29_04610 PF00486 Transcriptional regulatory protein, C terminal LKW29_04615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_04615 PF18698 Histidine kinase sensor domain LKW29_04615 PF00512 His Kinase A (phospho-acceptor) domain LKW29_04615 PF00672 HAMP domain LKW29_04615 PF00989 PAS fold LKW29_04620 PF01923 Cobalamin adenosyltransferase LKW29_04635 PF12822 ECF transporter, substrate-specific component LKW29_04645 PF14493 Helix-turn-helix domain LKW29_04650 PF00271 Helicase conserved C-terminal domain LKW29_04650 PF00270 DEAD/DEAH box helicase LKW29_04655 PF02517 CPBP intramembrane metalloprotease LKW29_04670 PF02310 B12 binding domain LKW29_04670 PF02607 B12 binding domain LKW29_04670 PF13411 MerR HTH family regulatory protein LKW29_04675 PF05389 Negative regulator of genetic competence (MecA) LKW29_04680 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LKW29_04680 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LKW29_04705 PF00710 Asparaginase, N-terminal LKW29_04705 PF17763 Glutaminase/Asparaginase C-terminal domain LKW29_04715 PF02224 Cytidylate kinase LKW29_04720 PF00575 S1 RNA binding domain LKW29_04725 PF01070 FMN-dependent dehydrogenase LKW29_04730 PF14140 YpzI-like protein LKW29_04740 PF14045 YIEGIA protein LKW29_04750 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LKW29_04750 PF01926 50S ribosome-binding GTPase LKW29_04755 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LKW29_04755 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LKW29_04765 PF10966 Protein of unknown function (DUF2768) LKW29_04775 PF09547 Stage IV sporulation protein A (spore_IV_A) LKW29_04780 PF00216 Bacterial DNA-binding protein LKW29_04785 PF01227 GTP cyclohydrolase I LKW29_04790 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 LKW29_04795 PF01209 ubiE/COQ5 methyltransferase family LKW29_04800 PF00348 Polyprenyl synthetase LKW29_04805 PF00334 Nucleoside diphosphate kinase LKW29_04810 PF01264 Chorismate synthase LKW29_04815 PF01761 3-dehydroquinate synthase LKW29_04820 PF00155 Aminotransferase class I and II LKW29_04830 PF08864 UPF0302 domain LKW29_04830 PF08858 IDEAL domain LKW29_04835 PF10673 Protein of unknown function (DUF2487) LKW29_04840 PF00355 Rieske [2Fe-2S] domain LKW29_04845 PF00033 Cytochrome b/b6/petB LKW29_04850 PF00032 Cytochrome b(C-terminal)/b6/petD LKW29_04850 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LKW29_04855 PF07187 Protein of unknown function (DUF1405) LKW29_04870 PF04298 Putative neutral zinc metallopeptidase LKW29_04880 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LKW29_04880 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LKW29_04885 PF03819 MazG nucleotide pyrophosphohydrolase domain LKW29_04890 PF05173 Dihydrodipicolinate reductase, C-terminus LKW29_04890 PF01113 Dihydrodipicolinate reductase, N-terminus LKW29_04895 PF02142 MGS-like domain LKW29_04900 PF02585 GlcNAc-PI de-N-acetylase LKW29_04905 PF00534 Glycosyl transferases group 1 LKW29_04905 PF13439 Glycosyltransferase Family 4 LKW29_04910 PF01743 Poly A polymerase head domain LKW29_04910 PF12627 Probable RNA and SrmB- binding site of polymerase A LKW29_04910 PF13735 tRNA nucleotidyltransferase domain 2 putative LKW29_04915 PF02237 Biotin protein ligase C terminal domain LKW29_04915 PF03099 Biotin/lipoate A/B protein ligase family LKW29_04915 PF08279 HTH domain LKW29_04925 PF02548 Ketopantoate hydroxymethyltransferase LKW29_04930 PF02569 Pantoate-beta-alanine ligase LKW29_04935 PF02261 Aspartate decarboxylase LKW29_04945 PF14084 Protein of unknown function (DUF4264) LKW29_04955 PF00155 Aminotransferase class I and II LKW29_04960 PF07261 Replication initiation and membrane attachment LKW29_04965 PF00730 HhH-GPD superfamily base excision DNA repair protein LKW29_04965 PF10576 Iron-sulfur binding domain of endonuclease III LKW29_04965 PF00633 Helix-hairpin-helix motif LKW29_04975 PF00905 Penicillin binding protein transpeptidase domain LKW29_04975 PF00912 Transglycosylase LKW29_04980 PF03838 Recombination protein U LKW29_04985 PF10720 Protein of unknown function (DUF2515) LKW29_05020 PF06908 YspA SLOG family LKW29_05025 PF05103 DivIVA protein LKW29_05035 PF02926 THUMP domain LKW29_05035 PF01170 Putative RNA methylase family UPF0020 LKW29_05045 PF13307 Helicase C-terminal domain LKW29_05050 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LKW29_05060 PF01636 Phosphotransferase enzyme family LKW29_05065 PF00557 Metallopeptidase family M24 LKW29_05070 PF00156 Phosphoribosyl transferase domain LKW29_05075 PF00860 Permease family LKW29_05080 PF04235 Protein of unknown function (DUF418) LKW29_05085 PF00350 Dynamin family LKW29_05095 PF00583 Acetyltransferase (GNAT) family LKW29_05100 PF10752 Protein of unknown function (DUF2533) LKW29_05105 PF00581 Rhodanese-like domain LKW29_05140 PF00689 Cation transporting ATPase, C-terminus LKW29_05140 PF00690 Cation transporter/ATPase, N-terminus LKW29_05145 PF01367 5'-3' exonuclease, C-terminal SAM fold LKW29_05145 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LKW29_05170 PF02397 Bacterial sugar transferase LKW29_05185 PF00535 Glycosyl transferase family 2 LKW29_05205 PF13673 Acetyltransferase (GNAT) domain LKW29_05205 PF18014 Acetyltransferase (GNAT) domain LKW29_05225 PF13456 Reverse transcriptase-like LKW29_05230 PF01263 Aldose 1-epimerase LKW29_05255 PF00313 'Cold-shock' DNA-binding domain LKW29_05265 PF01810 LysE type translocator LKW29_05280 PF04341 Protein of unknown function, DUF485 LKW29_05285 PF00474 Sodium:solute symporter family LKW29_05290 PF00202 Aminotransferase class-III LKW29_05300 PF00999 Sodium/hydrogen exchanger family LKW29_05305 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LKW29_05305 PF00753 Metallo-beta-lactamase superfamily LKW29_05305 PF17770 Ribonuclease J C-terminal domain LKW29_05310 PF06445 GyrI-like small molecule binding domain LKW29_05310 PF13411 MerR HTH family regulatory protein LKW29_05325 PF02698 DUF218 domain LKW29_05335 PF00881 Nitroreductase family LKW29_05380 PF17209 Hfq protein LKW29_05390 PF01618 MotA/TolQ/ExbB proton channel family LKW29_05400 PF00072 Response regulator receiver domain LKW29_05410 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LKW29_05410 PF04509 CheC-like family LKW29_05425 PF01739 CheR methyltransferase, SAM binding domain LKW29_05425 PF03705 CheR methyltransferase, all-alpha domain LKW29_05445 PF00460 Flagella basal body rod protein LKW29_05445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LKW29_05470 PF00460 Flagella basal body rod protein LKW29_05475 PF00460 Flagella basal body rod protein LKW29_05475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LKW29_05480 PF02049 Flagellar hook-basal body complex protein FliE LKW29_05490 PF14842 FliG N-terminal domain LKW29_05490 PF14841 FliG middle domain LKW29_05490 PF01706 FliG C-terminal domain LKW29_05500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LKW29_05500 PF02874 ATP synthase alpha/beta family, beta-barrel domain LKW29_05500 PF18269 T3SS EscN ATPase C-terminal domain LKW29_05520 PF07559 Flagellar basal body protein FlaE LKW29_05520 PF00460 Flagella basal body rod protein LKW29_05520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LKW29_05535 PF01584 CheW-like domain LKW29_05535 PF00072 Response regulator receiver domain LKW29_05540 PF12181 DNA binding domain of the motility gene repressor (MogR) LKW29_05545 PF00535 Glycosyl transferase family 2 LKW29_05570 PF00535 Glycosyl transferase family 2 LKW29_05570 PF13181 Tetratricopeptide repeat LKW29_05585 PF00700 Bacterial flagellin C-terminal helical region LKW29_05585 PF00669 Bacterial flagellin N-terminal helical region LKW29_05590 PF01464 Transglycosylase SLT domain LKW29_05605 PF04509 CheC-like family LKW29_05605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LKW29_05615 PF00813 FliP family LKW29_05620 PF01313 Bacterial export proteins, family 3 LKW29_05630 PF01312 FlhB HrpN YscU SpaS Family LKW29_05635 PF00771 FHIPEP family LKW29_05640 PF00448 SRP54-type protein, GTPase domain LKW29_05645 PF00460 Flagella basal body rod protein LKW29_05645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LKW29_05650 PF02272 DHHA1 domain LKW29_05650 PF01411 tRNA synthetases class II (A) LKW29_05650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LKW29_05675 PF00440 Bacterial regulatory proteins, tetR family LKW29_05675 PF17932 Tetracyclin repressor-like, C-terminal domain LKW29_05680 PF17329 Family of unknown function (DUF5367) LKW29_05695 PF03992 Antibiotic biosynthesis monooxygenase LKW29_05700 PF08141 Small acid-soluble spore protein H family LKW29_05725 PF00005 ABC transporter LKW29_05725 PF08402 TOBE domain LKW29_05735 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_05740 PF00753 Metallo-beta-lactamase superfamily LKW29_05740 PF12706 Beta-lactamase superfamily domain LKW29_05765 PF07943 Penicillin-binding protein 5, C-terminal domain LKW29_05765 PF00768 D-alanyl-D-alanine carboxypeptidase LKW29_05775 PF00300 Histidine phosphatase superfamily (branch 1) LKW29_05805 PF00733 Asparagine synthase LKW29_05805 PF13537 Glutamine amidotransferase domain LKW29_05825 PF16916 Dimerisation domain of Zinc Transporter LKW29_05825 PF01545 Cation efflux family LKW29_05835 PF00392 Bacterial regulatory proteins, gntR family LKW29_05835 PF07729 FCD domain LKW29_05840 PF00892 EamA-like transporter family LKW29_05845 PF02492 CobW/HypB/UreG, nucleotide-binding domain LKW29_05845 PF07683 Cobalamin synthesis protein cobW C-terminal domain LKW29_05850 PF03773 Predicted permease LKW29_05860 PF00535 Glycosyl transferase family 2 LKW29_05865 PF03553 Na+/H+ antiporter family LKW29_05870 PF00206 Lyase LKW29_05870 PF10415 Fumarase C C-terminus LKW29_05895 PF03575 Peptidase family S51 LKW29_05915 PF02683 Cytochrome C biogenesis protein transmembrane region LKW29_05920 PF00578 AhpC/TSA family LKW29_05940 PF00291 Pyridoxal-phosphate dependent enzyme LKW29_05945 PF04286 Protein of unknown function (DUF445) LKW29_05970 PF00196 Bacterial regulatory proteins, luxR family LKW29_05970 PF00072 Response regulator receiver domain LKW29_05975 PF07730 Histidine kinase LKW29_05975 PF13185 GAF domain LKW29_05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_05975 PF13492 GAF domain LKW29_05980 PF00005 ABC transporter LKW29_05995 PF13091 PLD-like domain LKW29_06000 PF00696 Amino acid kinase family LKW29_06005 PF00375 Sodium:dicarboxylate symporter family LKW29_06010 PF10415 Fumarase C C-terminus LKW29_06010 PF00206 Lyase LKW29_06015 PF00390 Malic enzyme, N-terminal domain LKW29_06015 PF03949 Malic enzyme, NAD binding domain LKW29_06020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_06025 PF00072 Response regulator receiver domain LKW29_06025 PF08664 YcbB domain LKW29_06030 PF00271 Helicase conserved C-terminal domain LKW29_06030 PF00176 SNF2 family N-terminal domain LKW29_06030 PF04434 SWIM zinc finger LKW29_06045 PF03590 Aspartate-ammonia ligase LKW29_06065 PF13840 ACT domain LKW29_06065 PF00696 Amino acid kinase family LKW29_06075 PF13761 Domain of unknown function (DUF4166) LKW29_06080 PF14158 YndJ-like protein LKW29_06090 PF13205 Bacterial Ig-like domain LKW29_06090 PF02368 Bacterial Ig-like domain (group 2) LKW29_06090 PF00395 S-layer homology domain LKW29_06100 PF07690 Major Facilitator Superfamily LKW29_06115 PF02554 Carbon starvation protein CstA LKW29_06120 PF03976 Polyphosphate kinase 2 (PPK2) LKW29_06125 PF07690 Major Facilitator Superfamily LKW29_06130 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LKW29_06130 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LKW29_06140 PF16360 GTP-binding GTPase Middle Region LKW29_06140 PF13167 GTP-binding GTPase N-terminal LKW29_06140 PF01926 50S ribosome-binding GTPase LKW29_06155 PF00291 Pyridoxal-phosphate dependent enzyme LKW29_06170 PF01943 Polysaccharide biosynthesis protein LKW29_06170 PF14667 Polysaccharide biosynthesis C-terminal domain LKW29_06175 PF00209 Sodium:neurotransmitter symporter family LKW29_06180 PF03422 Carbohydrate binding module (family 6) LKW29_06180 PF00457 Glycosyl hydrolases family 11 LKW29_06180 PF01522 Polysaccharide deacetylase LKW29_06190 PF04239 Protein of unknown function (DUF421) LKW29_06210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LKW29_06210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LKW29_06225 PF01625 Peptide methionine sulfoxide reductase LKW29_06235 PF01063 Amino-transferase class IV LKW29_06240 PF00205 Thiamine pyrophosphate enzyme, central domain LKW29_06240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LKW29_06240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LKW29_06245 PF10369 Small subunit of acetolactate synthase LKW29_06250 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LKW29_06250 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LKW29_06255 PF00920 Dehydratase family LKW29_06260 PF00291 Pyridoxal-phosphate dependent enzyme LKW29_06260 PF00585 C-terminal regulatory domain of Threonine dehydratase LKW29_06290 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LKW29_06300 PF04397 LytTr DNA-binding domain LKW29_06300 PF00072 Response regulator receiver domain LKW29_06305 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LKW29_06305 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LKW29_06320 PF01979 Amidohydrolase family LKW29_06325 PF13026 Protein of unknown function (DUF3887) LKW29_06325 PF12146 Serine aminopeptidase, S33 LKW29_06330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_06355 PF04055 Radical SAM superfamily LKW29_06355 PF13186 Iron-sulfur cluster-binding domain LKW29_06360 PF13302 Acetyltransferase (GNAT) domain LKW29_06365 PF00072 Response regulator receiver domain LKW29_06365 PF00486 Transcriptional regulatory protein, C terminal LKW29_06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_06370 PF00512 His Kinase A (phospho-acceptor) domain LKW29_06380 PF01566 Natural resistance-associated macrophage protein LKW29_06385 PF17773 UPF0176 acylphosphatase like domain LKW29_06385 PF12368 Rhodanase C-terminal LKW29_06385 PF00581 Rhodanese-like domain LKW29_06395 PF02558 Ketopantoate reductase PanE/ApbA LKW29_06395 PF08546 Ketopantoate reductase PanE/ApbA C terminal LKW29_06410 PF05791 Bacillus haemolytic enterotoxin (HBL) LKW29_06425 PF04198 Putative sugar-binding domain LKW29_06430 PF01791 DeoC/LacD family aldolase LKW29_06435 PF01773 Na+ dependent nucleoside transporter N-terminus LKW29_06435 PF07662 Na+ dependent nucleoside transporter C-terminus LKW29_06440 PF02885 Glycosyl transferase family, helical bundle domain LKW29_06440 PF00591 Glycosyl transferase family, a/b domain LKW29_06440 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LKW29_06445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LKW29_06455 PF05979 Bacterial protein of unknown function (DUF896) LKW29_06475 PF05195 Aminopeptidase P, N-terminal domain LKW29_06475 PF00557 Metallopeptidase family M24 LKW29_06480 PF07731 Multicopper oxidase LKW29_06480 PF07732 Multicopper oxidase LKW29_06485 PF01551 Peptidase family M23 LKW29_06495 PF01751 Toprim domain LKW29_06495 PF01131 DNA topoisomerase LKW29_06495 PF13342 C-terminal repeat of topoisomerase LKW29_06495 PF01396 Topoisomerase DNA binding C4 zinc finger LKW29_06510 PF02525 Flavodoxin-like fold LKW29_06525 PF05425 Copper resistance protein D LKW29_06525 PF04234 CopC domain LKW29_06525 PF13115 YtkA-like LKW29_06530 PF07987 Domain of unkown function (DUF1775) LKW29_06540 PF00892 EamA-like transporter family LKW29_06545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LKW29_06545 PF03466 LysR substrate binding domain LKW29_06550 PF02082 Transcriptional regulator LKW29_06555 PF01323 DSBA-like thioredoxin domain LKW29_06560 PF00881 Nitroreductase family LKW29_06565 PF01425 Amidase LKW29_06570 PF01594 AI-2E family transporter LKW29_06575 PF00056 lactate/malate dehydrogenase, NAD binding domain LKW29_06575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LKW29_06580 PF01593 Flavin containing amine oxidoreductase LKW29_06585 PF07683 Cobalamin synthesis protein cobW C-terminal domain LKW29_06585 PF02492 CobW/HypB/UreG, nucleotide-binding domain LKW29_06605 PF01575 MaoC like domain LKW29_06610 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LKW29_06610 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LKW29_06620 PF00005 ABC transporter LKW29_06620 PF12399 Branched-chain amino acid ATP-binding cassette transporter LKW29_06625 PF00005 ABC transporter LKW29_06630 PF02653 Branched-chain amino acid transport system / permease component LKW29_06640 PF03466 LysR substrate binding domain LKW29_06640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LKW29_06650 PF14552 Tautomerase enzyme LKW29_06660 PF01047 MarR family LKW29_06670 PF01654 Cytochrome bd terminal oxidase subunit I LKW29_06675 PF02322 Cytochrome bd terminal oxidase subunit II LKW29_06680 PF00005 ABC transporter LKW29_06680 PF00664 ABC transporter transmembrane region LKW29_06685 PF00005 ABC transporter LKW29_06685 PF00664 ABC transporter transmembrane region LKW29_06700 PF02016 LD-carboxypeptidase N-terminal domain LKW29_06700 PF17676 LD-carboxypeptidase C-terminal domain LKW29_06705 PF00768 D-alanyl-D-alanine carboxypeptidase LKW29_06705 PF07943 Penicillin-binding protein 5, C-terminal domain LKW29_06720 PF01476 LysM domain LKW29_06720 PF00877 NlpC/P60 family LKW29_06735 PF00072 Response regulator receiver domain LKW29_06735 PF00486 Transcriptional regulatory protein, C terminal LKW29_06750 PF00106 short chain dehydrogenase LKW29_06760 PF04439 Streptomycin adenylyltransferase LKW29_06765 PF01522 Polysaccharide deacetylase LKW29_06785 PF03447 Homoserine dehydrogenase, NAD binding domain LKW29_06785 PF00742 Homoserine dehydrogenase LKW29_06785 PF01842 ACT domain LKW29_06790 PF00291 Pyridoxal-phosphate dependent enzyme LKW29_06795 PF08544 GHMP kinases C terminal LKW29_06795 PF00288 GHMP kinases N terminal domain LKW29_06810 PF03816 Cell envelope-related transcriptional attenuator domain LKW29_06820 PF00072 Response regulator receiver domain LKW29_06820 PF00486 Transcriptional regulatory protein, C terminal LKW29_06825 PF16736 Single Cache-like LKW29_06825 PF00512 His Kinase A (phospho-acceptor) domain LKW29_06825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_06825 PF00989 PAS fold LKW29_06830 PF01522 Polysaccharide deacetylase LKW29_06840 PF02308 MgtC family LKW29_06845 PF00583 Acetyltransferase (GNAT) family LKW29_06850 PF06276 Ferric iron reductase FhuF-like transporter LKW29_06850 PF04183 IucA / IucC family LKW29_06855 PF06276 Ferric iron reductase FhuF-like transporter LKW29_06855 PF04183 IucA / IucC family LKW29_06860 PF00501 AMP-binding enzyme LKW29_06860 PF13193 AMP-binding enzyme C-terminal domain LKW29_06875 PF01261 Xylose isomerase-like TIM barrel LKW29_06880 PF00269 Small, acid-soluble spore proteins, alpha/beta type LKW29_06885 PF07690 Major Facilitator Superfamily LKW29_06890 PF01810 LysE type translocator LKW29_06900 PF01734 Patatin-like phospholipase LKW29_06925 PF13344 Haloacid dehalogenase-like hydrolase LKW29_06925 PF00293 NUDIX domain LKW29_06930 PF02540 NAD synthase LKW29_06935 PF02687 FtsX-like permease family LKW29_06940 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LKW29_06940 PF18277 AbrB C-terminal domain LKW29_06945 PF00082 Subtilase family LKW29_06950 PF01022 Bacterial regulatory protein, arsR family LKW29_06955 PF00248 Aldo/keto reductase family LKW29_06980 PF03193 RsgA GTPase LKW29_06985 PF00672 HAMP domain LKW29_06985 PF02743 Cache domain LKW29_06985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LKW29_07005 PF00210 Ferritin-like domain LKW29_07020 PF00296 Luciferase-like monooxygenase LKW29_07030 PF01593 Flavin containing amine oxidoreductase LKW29_07040 PF00248 Aldo/keto reductase family LKW29_07045 PF02492 CobW/HypB/UreG, nucleotide-binding domain LKW29_07045 PF07683 Cobalamin synthesis protein cobW C-terminal domain LKW29_07050 PF00583 Acetyltransferase (GNAT) family LKW29_07110 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LKW29_07110 PF01297 Zinc-uptake complex component A periplasmic LKW29_07120 PF13460 NAD(P)H-binding LKW29_07125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LKW29_07130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LKW29_07130 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LKW29_07140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_07145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LKW29_07155 PF00300 Histidine phosphatase superfamily (branch 1) LKW29_07165 PF08757 CotH kinase protein LKW29_07170 PF00293 NUDIX domain LKW29_07175 PF09335 SNARE associated Golgi protein LKW29_07180 PF14667 Polysaccharide biosynthesis C-terminal domain LKW29_07180 PF01943 Polysaccharide biosynthesis protein LKW29_07190 PF03773 Predicted permease LKW29_07195 PF09323 Domain of unknown function (DUF1980) LKW29_07200 PF03061 Thioesterase superfamily LKW29_07210 PF13396 Phospholipase_D-nuclease N-terminal LKW29_07210 PF13091 PLD-like domain LKW29_07225 PF13460 NAD(P)H-binding LKW29_07230 PF04306 Protein of unknown function (DUF456) LKW29_07235 PF00571 CBS domain LKW29_07235 PF03471 Transporter associated domain LKW29_07235 PF01595 Cyclin M transmembrane N-terminal domain LKW29_07250 PF05525 Branched-chain amino acid transport protein LKW29_07255 PF01588 Putative tRNA binding domain LKW29_07275 PF07454 Stage II sporulation protein P (SpoIIP) LKW29_07285 PF02557 D-alanyl-D-alanine carboxypeptidase LKW29_07295 PF01425 Amidase LKW29_07300 PF07690 Major Facilitator Superfamily LKW29_07310 PF01145 SPFH domain / Band 7 family LKW29_07315 PF00300 Histidine phosphatase superfamily (branch 1) LKW29_07330 PF00842 Alanine racemase, C-terminal domain LKW29_07330 PF01168 Alanine racemase, N-terminal domain LKW29_07335 PF13847 Methyltransferase domain LKW29_07350 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LKW29_07355 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LKW29_07355 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LKW29_07360 PF00392 Bacterial regulatory proteins, gntR family LKW29_07360 PF00155 Aminotransferase class I and II LKW29_07395 PF00583 Acetyltransferase (GNAT) family LKW29_07450 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LKW29_07475 PF01209 ubiE/COQ5 methyltransferase family LKW29_07480 PF01268 Formate--tetrahydrofolate ligase LKW29_07490 PF00270 DEAD/DEAH box helicase LKW29_07490 PF00271 Helicase conserved C-terminal domain LKW29_07500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LKW29_07510 PF08240 Alcohol dehydrogenase GroES-like domain LKW29_07510 PF00107 Zinc-binding dehydrogenase LKW29_07515 PF04542 Sigma-70 region 2 LKW29_07515 PF08281 Sigma-70, region 4 LKW29_07540 PF00255 Glutathione peroxidase LKW29_07545 PF01841 Transglutaminase-like superfamily LKW29_07545 PF11992 Domain of unknown function (DUF3488) LKW29_07545 PF13559 Domain of unknown function (DUF4129) LKW29_07550 PF01882 Protein of unknown function DUF58 LKW29_07555 PF17863 AAA lid domain LKW29_07555 PF07726 ATPase family associated with various cellular activities (AAA) LKW29_07570 PF01568 Molydopterin dinucleotide binding domain LKW29_07570 PF14710 Respiratory nitrate reductase alpha N-terminal LKW29_07570 PF00384 Molybdopterin oxidoreductase LKW29_07575 PF13247 4Fe-4S dicluster domain LKW29_07575 PF14711 Respiratory nitrate reductase beta C-terminal LKW29_07580 PF02613 Nitrate reductase delta subunit LKW29_07585 PF02665 Nitrate reductase gamma subunit LKW29_07590 PF00155 Aminotransferase class I and II LKW29_07590 PF00392 Bacterial regulatory proteins, gntR family LKW29_07595 PF00005 ABC transporter LKW29_07605 PF00027 Cyclic nucleotide-binding domain LKW29_07605 PF00325 Bacterial regulatory proteins, crp family LKW29_07610 PF06463 Molybdenum Cofactor Synthesis C LKW29_07610 PF04055 Radical SAM superfamily LKW29_07615 PF00899 ThiF family LKW29_07620 PF00994 Probable molybdopterin binding domain LKW29_07620 PF03454 MoeA C-terminal region (domain IV) LKW29_07620 PF03453 MoeA N-terminal region (domain I and II) LKW29_07625 PF02391 MoaE protein LKW29_07635 PF07690 Major Facilitator Superfamily LKW29_07655 PF01903 CbiX LKW29_07660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LKW29_07665 PF00355 Rieske [2Fe-2S] domain LKW29_07670 PF18267 Rubredoxin NAD+ reductase C-terminal domain LKW29_07670 PF04324 BFD-like [2Fe-2S] binding domain LKW29_07670 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LKW29_07670 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LKW29_07670 PF07992 Pyridine nucleotide-disulphide oxidoreductase LKW29_07675 PF01814 Hemerythrin HHE cation binding domain LKW29_07675 PF04405 Domain of Unknown function (DUF542) LKW29_07710 PF04232 Stage V sporulation protein S (SpoVS) LKW29_07735 PF01966 HD domain LKW29_07740 PF00005 ABC transporter LKW29_07740 PF16326 ABC transporter C-terminal domain LKW29_07740 PF12848 ABC transporter LKW29_07755 PF00436 Single-strand binding protein family LKW29_07760 PF00440 Bacterial regulatory proteins, tetR family LKW29_07770 PF08712 Scaffold protein Nfu/NifU N terminal LKW29_07770 PF13769 Virulence factor LKW29_07780 PF06491 Disulphide isomerase LKW29_07785 PF04445 Putative SAM-dependent methyltransferase LKW29_07790 PF03485 Arginyl tRNA synthetase N terminal domain LKW29_07790 PF05746 DALR anticodon binding domain LKW29_07790 PF00750 tRNA synthetases class I (R) LKW29_07815 PF08264 Anticodon-binding domain of tRNA LKW29_07815 PF00133 tRNA synthetases class I (I, L, M and V) LKW29_07835 PF00152 tRNA synthetases class II (D, K and N) LKW29_07835 PF01336 OB-fold nucleic acid binding domain LKW29_07855 PF01580 FtsK/SpoIIIE family LKW29_07855 PF12538 DNA transporter LKW29_07925 PF02595 Glycerate kinase family LKW29_07930 PF00939 Sodium:sulfate symporter transmembrane region LKW29_07935 PF00072 Response regulator receiver domain LKW29_07935 PF00486 Transcriptional regulatory protein, C terminal LKW29_07940 PF00512 His Kinase A (phospho-acceptor) domain LKW29_07940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_07940 PF00672 HAMP domain LKW29_07955 PF00209 Sodium:neurotransmitter symporter family LKW29_07970 PF10997 Alternate to MurJ LKW29_07975 PF13419 Haloacid dehalogenase-like hydrolase LKW29_07985 PF00465 Iron-containing alcohol dehydrogenase LKW29_07990 PF01177 Asp/Glu/Hydantoin racemase LKW29_07995 PF01980 tRNA-methyltransferase O LKW29_08000 PF00583 Acetyltransferase (GNAT) family LKW29_08015 PF00005 ABC transporter LKW29_08025 PF14005 YpjP-like protein LKW29_08030 PF13419 Haloacid dehalogenase-like hydrolase LKW29_08050 PF07930 D-aminopeptidase, domain B LKW29_08050 PF00144 Beta-lactamase LKW29_08055 PF00303 Thymidylate synthase LKW29_08060 PF00186 Dihydrofolate reductase LKW29_08065 PF05223 NTF2-like N-terminal transpeptidase domain LKW29_08065 PF03717 Penicillin-binding Protein dimerisation domain LKW29_08065 PF00905 Penicillin binding protein transpeptidase domain LKW29_08070 PF02525 Flavodoxin-like fold LKW29_08075 PF01553 Acyltransferase LKW29_08080 PF03006 Haemolysin-III related LKW29_08085 PF02416 mttA/Hcf106 family LKW29_08090 PF00902 Sec-independent protein translocase protein (TatC) LKW29_08100 PF02645 Uncharacterised protein, DegV family COG1307 LKW29_08110 PF02630 SCO1/SenC LKW29_08115 PF00011 Hsp20/alpha crystallin family LKW29_08120 PF13537 Glutamine amidotransferase domain LKW29_08120 PF00733 Asparagine synthase LKW29_08135 PF01497 Periplasmic binding protein LKW29_08140 PF01063 Amino-transferase class IV LKW29_08145 PF00881 Nitroreductase family LKW29_08170 PF00011 Hsp20/alpha crystallin family LKW29_08175 PF00924 Mechanosensitive ion channel LKW29_08180 PF07730 Histidine kinase LKW29_08180 PF13185 GAF domain LKW29_08185 PF00196 Bacterial regulatory proteins, luxR family LKW29_08185 PF00072 Response regulator receiver domain LKW29_08195 PF08240 Alcohol dehydrogenase GroES-like domain LKW29_08195 PF00107 Zinc-binding dehydrogenase LKW29_08235 PF03358 NADPH-dependent FMN reductase LKW29_08250 PF00571 CBS domain LKW29_08250 PF00005 ABC transporter LKW29_08255 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_08260 PF13520 Amino acid permease LKW29_08290 PF00571 CBS domain LKW29_08290 PF03471 Transporter associated domain LKW29_08290 PF01595 Cyclin M transmembrane N-terminal domain LKW29_08295 PF00171 Aldehyde dehydrogenase family LKW29_08300 PF07997 Protein of unknown function (DUF1694) LKW29_08305 PF09385 Histidine kinase N terminal LKW29_08315 PF00202 Aminotransferase class-III LKW29_08325 PF01144 Coenzyme A transferase LKW29_08330 PF01546 Peptidase family M20/M25/M40 LKW29_08330 PF07687 Peptidase dimerisation domain LKW29_08335 PF00583 Acetyltransferase (GNAT) family LKW29_08340 PF13426 PAS domain LKW29_08340 PF02954 Bacterial regulatory protein, Fis family LKW29_08340 PF00158 Sigma-54 interaction domain LKW29_08345 PF12544 Lysine-2,3-aminomutase LKW29_08350 PF14122 YokU-like protein, putative antitoxin LKW29_08355 PF06855 YozE SAM-like fold LKW29_08370 PF14162 YozD-like protein LKW29_08385 PF07070 SpoOM protein LKW29_08390 PF01569 PAP2 superfamily LKW29_08395 PF16916 Dimerisation domain of Zinc Transporter LKW29_08395 PF01545 Cation efflux family LKW29_08400 PF00085 Thioredoxin LKW29_08415 PF04740 LXG domain of WXG superfamily LKW29_08415 PF14436 Bacterial EndoU nuclease LKW29_08420 PF00150 Cellulase (glycosyl hydrolase family 5) LKW29_08420 PF03424 Carbohydrate binding domain (family 17/28) LKW29_08420 PF00395 S-layer homology domain LKW29_08430 PF04471 Restriction endonuclease LKW29_08540 PF10676 Spore germination protein gerPA/gerPF LKW29_08560 PF00905 Penicillin binding protein transpeptidase domain LKW29_08560 PF00912 Transglycosylase LKW29_08570 PF07690 Major Facilitator Superfamily LKW29_08575 PF01521 Iron-sulphur cluster biosynthesis LKW29_08580 PF00285 Citrate synthase, C-terminal domain LKW29_08585 PF03972 MmgE/PrpD family LKW29_08595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LKW29_08595 PF02770 Acyl-CoA dehydrogenase, middle domain LKW29_08595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LKW29_08600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LKW29_08600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LKW29_08605 PF00171 Aldehyde dehydrogenase family LKW29_08610 PF01810 LysE type translocator LKW29_08615 PF00378 Enoyl-CoA hydratase/isomerase LKW29_08625 PF10763 Protein of unknown function (DUF2584) LKW29_08630 PF00149 Calcineurin-like phosphoesterase LKW29_08630 PF12320 Type 5 capsule protein repressor C-terminal domain LKW29_08635 PF13476 AAA domain LKW29_08645 PF01022 Bacterial regulatory protein, arsR family LKW29_08655 PF07690 Major Facilitator Superfamily LKW29_08660 PF00106 short chain dehydrogenase LKW29_08665 PF00425 chorismate binding enzyme LKW29_08670 PF13193 AMP-binding enzyme C-terminal domain LKW29_08670 PF00501 AMP-binding enzyme LKW29_08675 PF00857 Isochorismatase family LKW29_08675 PF00550 Phosphopantetheine attachment site LKW29_08685 PF03621 MbtH-like protein LKW29_08690 PF07690 Major Facilitator Superfamily LKW29_08705 PF00216 Bacterial DNA-binding protein LKW29_08715 PF05163 DinB family LKW29_08720 PF00082 Subtilase family LKW29_08740 PF16291 Domain of unknown function (DUF4937 LKW29_08745 PF00849 RNA pseudouridylate synthase LKW29_08745 PF01479 S4 domain LKW29_08750 PF03129 Anticodon binding domain LKW29_08750 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LKW29_08750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LKW29_08750 PF02824 TGS domain LKW29_08765 PF12146 Serine aminopeptidase, S33 LKW29_08790 PF13649 Methyltransferase domain LKW29_08835 PF16123 Hydroxyacylglutathione hydrolase C-terminus LKW29_08835 PF00753 Metallo-beta-lactamase superfamily LKW29_08845 PF03176 MMPL family LKW29_08855 PF00302 Chloramphenicol acetyltransferase LKW29_08870 PF00583 Acetyltransferase (GNAT) family LKW29_08900 PF01593 Flavin containing amine oxidoreductase LKW29_08910 PF13302 Acetyltransferase (GNAT) domain LKW29_08920 PF00313 'Cold-shock' DNA-binding domain LKW29_08985 PF03466 LysR substrate binding domain LKW29_08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LKW29_08990 PF01118 Semialdehyde dehydrogenase, NAD binding domain LKW29_08990 PF02774 Semialdehyde dehydrogenase, dimerisation domain LKW29_09005 PF03466 LysR substrate binding domain LKW29_09005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LKW29_09010 PF03473 MOSC domain LKW29_09010 PF03475 3-alpha domain LKW29_09025 PF00005 ABC transporter LKW29_09025 PF00664 ABC transporter transmembrane region LKW29_09030 PF00664 ABC transporter transmembrane region LKW29_09030 PF00005 ABC transporter LKW29_09045 PF01810 LysE type translocator LKW29_09050 PF07883 Cupin domain LKW29_09050 PF01381 Helix-turn-helix LKW29_09080 PF00890 FAD binding domain LKW29_09085 PF08281 Sigma-70, region 4 LKW29_09085 PF04542 Sigma-70 region 2 LKW29_09085 PF12680 SnoaL-like domain LKW29_09110 PF02638 Glycosyl hydrolase-like 10 LKW29_09120 PF02378 Phosphotransferase system, EIIC LKW29_09130 PF03702 Anhydro-N-acetylmuramic acid kinase LKW29_09135 PF01869 BadF/BadG/BcrA/BcrD ATPase family LKW29_09140 PF02660 Glycerol-3-phosphate acyltransferase LKW29_09145 PF00266 Aminotransferase class-V LKW29_09150 PF00291 Pyridoxal-phosphate dependent enzyme LKW29_09165 PF00753 Metallo-beta-lactamase superfamily LKW29_09165 PF16123 Hydroxyacylglutathione hydrolase C-terminus LKW29_09180 PF00270 DEAD/DEAH box helicase LKW29_09180 PF00271 Helicase conserved C-terminal domain LKW29_09195 PF00440 Bacterial regulatory proteins, tetR family LKW29_09195 PF17932 Tetracyclin repressor-like, C-terminal domain LKW29_09210 PF12704 MacB-like periplasmic core domain LKW29_09210 PF02687 FtsX-like permease family LKW29_09210 PF00005 ABC transporter LKW29_09215 PF09313 Domain of unknown function (DUF1971) LKW29_09215 PF03848 Tellurite resistance protein TehB LKW29_09225 PF08241 Methyltransferase domain LKW29_09230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LKW29_09230 PF00205 Thiamine pyrophosphate enzyme, central domain LKW29_09230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LKW29_09235 PF12802 MarR family LKW29_09240 PF00300 Histidine phosphatase superfamily (branch 1) LKW29_09245 PF14171 Toxin SpoIISA, type II toxin-antitoxin system LKW29_09270 PF07687 Peptidase dimerisation domain LKW29_09270 PF01546 Peptidase family M20/M25/M40 LKW29_09285 PF08281 Sigma-70, region 4 LKW29_09285 PF04542 Sigma-70 region 2 LKW29_09295 PF00905 Penicillin binding protein transpeptidase domain LKW29_09295 PF03717 Penicillin-binding Protein dimerisation domain LKW29_09300 PF00905 Penicillin binding protein transpeptidase domain LKW29_09300 PF03717 Penicillin-binding Protein dimerisation domain LKW29_09310 PF01569 PAP2 superfamily LKW29_09315 PF00356 Bacterial regulatory proteins, lacI family LKW29_09325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LKW29_09325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LKW29_09330 PF00294 pfkB family carbohydrate kinase LKW29_09335 PF00171 Aldehyde dehydrogenase family LKW29_09340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LKW29_09340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LKW29_09340 PF00205 Thiamine pyrophosphate enzyme, central domain LKW29_09345 PF01261 Xylose isomerase-like TIM barrel LKW29_09350 PF01116 Fructose-bisphosphate aldolase class-II LKW29_09370 PF02872 5'-nucleotidase, C-terminal domain LKW29_09370 PF00149 Calcineurin-like phosphoesterase LKW29_09380 PF18801 response regulator aspartate phosphatase H, N terminal LKW29_09385 PF01381 Helix-turn-helix LKW29_09400 PF02557 D-alanyl-D-alanine carboxypeptidase LKW29_09410 PF00395 S-layer homology domain LKW29_09410 PF01520 N-acetylmuramoyl-L-alanine amidase LKW29_09420 PF00440 Bacterial regulatory proteins, tetR family LKW29_09425 PF16326 ABC transporter C-terminal domain LKW29_09425 PF00005 ABC transporter LKW29_09435 PF00563 EAL domain LKW29_09435 PF03707 Bacterial signalling protein N terminal repeat LKW29_09435 PF00990 Diguanylate cyclase, GGDEF domain LKW29_09440 PF13302 Acetyltransferase (GNAT) domain LKW29_09460 PF00753 Metallo-beta-lactamase superfamily LKW29_09475 PF00005 ABC transporter LKW29_09485 PF08359 YsiA-like protein, C-terminal region LKW29_09485 PF00440 Bacterial regulatory proteins, tetR family LKW29_09500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LKW29_09500 PF02770 Acyl-CoA dehydrogenase, middle domain LKW29_09500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LKW29_09505 PF02785 Biotin carboxylase C-terminal domain LKW29_09505 PF00289 Biotin carboxylase, N-terminal domain LKW29_09505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LKW29_09510 PF00364 Biotin-requiring enzyme LKW29_09515 PF00682 HMGL-like LKW29_09520 PF00378 Enoyl-CoA hydratase/isomerase LKW29_09525 PF01039 Carboxyl transferase domain LKW29_09530 PF13193 AMP-binding enzyme C-terminal domain LKW29_09530 PF00501 AMP-binding enzyme LKW29_09530 PF16177 Acetyl-coenzyme A synthetase N-terminus LKW29_09540 PF00583 Acetyltransferase (GNAT) family LKW29_09545 PF00485 Phosphoribulokinase / Uridine kinase family LKW29_09555 PF05163 DinB family LKW29_09560 PF07943 Penicillin-binding protein 5, C-terminal domain LKW29_09560 PF00768 D-alanyl-D-alanine carboxypeptidase LKW29_09565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_09565 PF00512 His Kinase A (phospho-acceptor) domain LKW29_09570 PF00072 Response regulator receiver domain LKW29_09570 PF00486 Transcriptional regulatory protein, C terminal LKW29_09575 PF01966 HD domain LKW29_09580 PF13021 Domain of unknown function (DUF3885) LKW29_09585 PF01048 Phosphorylase superfamily LKW29_09625 PF17760 UvrA interaction domain LKW29_09625 PF17755 UvrA DNA-binding domain LKW29_09625 PF17755 UvrA DNA-binding domain LKW29_09625 PF17760 UvrA interaction domain LKW29_09640 PF00144 Beta-lactamase LKW29_09645 PF00376 MerR family regulatory protein LKW29_09645 PF09278 MerR, DNA binding LKW29_09650 PF07690 Major Facilitator Superfamily LKW29_09670 PF01636 Phosphotransferase enzyme family LKW29_09675 PF12833 Helix-turn-helix domain LKW29_09690 PF00155 Aminotransferase class I and II LKW29_09690 PF00392 Bacterial regulatory proteins, gntR family LKW29_09705 PF00107 Zinc-binding dehydrogenase LKW29_09705 PF08240 Alcohol dehydrogenase GroES-like domain LKW29_09720 PF02875 Mur ligase family, glutamate ligase domain LKW29_09720 PF08245 Mur ligase middle domain LKW29_09720 PF01225 Mur ligase family, catalytic domain LKW29_09725 PF08245 Mur ligase middle domain LKW29_09725 PF01225 Mur ligase family, catalytic domain LKW29_09725 PF02875 Mur ligase family, glutamate ligase domain LKW29_09740 PF07486 Cell Wall Hydrolase LKW29_09750 PF00072 Response regulator receiver domain LKW29_09750 PF00486 Transcriptional regulatory protein, C terminal LKW29_09765 PF12848 ABC transporter LKW29_09765 PF00005 ABC transporter LKW29_09780 PF00005 ABC transporter LKW29_09805 PF03447 Homoserine dehydrogenase, NAD binding domain LKW29_09805 PF01842 ACT domain LKW29_09805 PF00742 Homoserine dehydrogenase LKW29_09810 PF00155 Aminotransferase class I and II LKW29_09810 PF00392 Bacterial regulatory proteins, gntR family LKW29_09815 PF07478 D-ala D-ala ligase C-terminus LKW29_09815 PF01820 D-ala D-ala ligase N-terminus LKW29_09820 PF03070 TENA/THI-4/PQQC family LKW29_09885 PF00067 Cytochrome P450 LKW29_09895 PF00132 Bacterial transferase hexapeptide (six repeats) LKW29_09900 PF07561 Domain of Unknown Function (DUF1540) LKW29_09910 PF00067 Cytochrome P450 LKW29_09930 PF00905 Penicillin binding protein transpeptidase domain LKW29_09930 PF03717 Penicillin-binding Protein dimerisation domain LKW29_09935 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LKW29_09940 PF01177 Asp/Glu/Hydantoin racemase LKW29_09945 PF07155 ECF-type riboflavin transporter, S component LKW29_09950 PF00005 ABC transporter LKW29_09950 PF12558 ATP-binding cassette cobalt transporter LKW29_09965 PF00512 His Kinase A (phospho-acceptor) domain LKW29_09965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_09975 PF04229 GrpB protein LKW29_09980 PF00107 Zinc-binding dehydrogenase LKW29_09980 PF08240 Alcohol dehydrogenase GroES-like domain LKW29_09985 PF00905 Penicillin binding protein transpeptidase domain LKW29_09985 PF03717 Penicillin-binding Protein dimerisation domain LKW29_09985 PF03793 PASTA domain LKW29_09995 PF00144 Beta-lactamase LKW29_09995 PF11954 Domain of unknown function (DUF3471) LKW29_10030 PF01965 DJ-1/PfpI family LKW29_10045 PF00144 Beta-lactamase LKW29_10060 PF07690 Major Facilitator Superfamily LKW29_10075 PF03009 Glycerophosphoryl diester phosphodiesterase family LKW29_10100 PF01270 Glycosyl hydrolases family 8 LKW29_10115 PF00293 NUDIX domain LKW29_10115 PF13344 Haloacid dehalogenase-like hydrolase LKW29_10125 PF00144 Beta-lactamase LKW29_10135 PF07690 Major Facilitator Superfamily LKW29_10150 PF00293 NUDIX domain LKW29_10150 PF09297 NADH pyrophosphatase zinc ribbon domain LKW29_10155 PF02767 DNA polymerase III beta subunit, central domain LKW29_10155 PF02768 DNA polymerase III beta subunit, C-terminal domain LKW29_10155 PF00712 DNA polymerase III beta subunit, N-terminal domain LKW29_10160 PF00293 NUDIX domain LKW29_10175 PF12706 Beta-lactamase superfamily domain LKW29_10195 PF09234 Domain of unknown function (DUF1963) LKW29_10225 PF08000 Bacterial PH domain LKW29_10235 PF12867 DinB superfamily LKW29_10250 PF02673 Bacitracin resistance protein BacA LKW29_10260 PF01541 GIY-YIG catalytic domain LKW29_10300 PF01266 FAD dependent oxidoreductase LKW29_10325 PF13419 Haloacid dehalogenase-like hydrolase LKW29_10340 PF07859 alpha/beta hydrolase fold LKW29_10345 PF00282 Pyridoxal-dependent decarboxylase conserved domain LKW29_10360 PF00128 Alpha amylase, catalytic domain LKW29_10360 PF03714 Bacterial pullanase-associated domain LKW29_10360 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LKW29_10365 PF02868 Thermolysin metallopeptidase, alpha-helical domain LKW29_10365 PF03413 Peptidase propeptide and YPEB domain LKW29_10365 PF07504 Fungalysin/Thermolysin Propeptide Motif LKW29_10365 PF01447 Thermolysin metallopeptidase, catalytic domain LKW29_10385 PF00344 SecY translocase LKW29_10390 PF08299 Bacterial dnaA protein helix-turn-helix LKW29_10390 PF00308 Bacterial dnaA protein LKW29_10390 PF11638 DnaA N-terminal domain LKW29_10395 PF00892 EamA-like transporter family LKW29_10400 PF00392 Bacterial regulatory proteins, gntR family LKW29_10400 PF00155 Aminotransferase class I and II LKW29_10405 PF00561 alpha/beta hydrolase fold LKW29_10430 PF06081 Aromatic acid exporter family member 1 LKW29_10445 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LKW29_10450 PF03413 Peptidase propeptide and YPEB domain LKW29_10450 PF14620 YpeB sporulation LKW29_10455 PF07486 Cell Wall Hydrolase LKW29_10455 PF01471 Putative peptidoglycan binding domain LKW29_10470 PF03301 Tryptophan 2,3-dioxygenase LKW29_10475 PF04199 Putative cyclase LKW29_10480 PF00266 Aminotransferase class-V LKW29_10485 PF00440 Bacterial regulatory proteins, tetR family LKW29_10485 PF08359 YsiA-like protein, C-terminal region LKW29_10490 PF13344 Haloacid dehalogenase-like hydrolase LKW29_10490 PF00293 NUDIX domain LKW29_10515 PF01590 GAF domain LKW29_10515 PF02954 Bacterial regulatory protein, Fis family LKW29_10515 PF00158 Sigma-54 interaction domain LKW29_10530 PF13302 Acetyltransferase (GNAT) domain LKW29_10535 PF08220 DeoR-like helix-turn-helix domain LKW29_10535 PF00455 DeoR C terminal sensor domain LKW29_10550 PF00403 Heavy-metal-associated domain LKW29_10550 PF07992 Pyridine nucleotide-disulphide oxidoreductase LKW29_10550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LKW29_10555 PF02082 Transcriptional regulator LKW29_10570 PF07992 Pyridine nucleotide-disulphide oxidoreductase LKW29_10570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LKW29_10575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LKW29_10575 PF00364 Biotin-requiring enzyme LKW29_10575 PF02817 e3 binding domain LKW29_10580 PF02780 Transketolase, C-terminal domain LKW29_10580 PF02779 Transketolase, pyrimidine binding domain LKW29_10585 PF00676 Dehydrogenase E1 component LKW29_10595 PF00106 short chain dehydrogenase LKW29_10600 PF13673 Acetyltransferase (GNAT) domain LKW29_10600 PF04229 GrpB protein LKW29_10630 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_10635 PF00571 CBS domain LKW29_10635 PF00005 ABC transporter LKW29_10640 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LKW29_10645 PF00574 Clp protease LKW29_10660 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LKW29_10665 PF13673 Acetyltransferase (GNAT) domain LKW29_10670 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LKW29_10670 PF18416 N-acetylglucosamine binding protein domain 2 LKW29_10685 PF10990 Protein of unknown function (DUF2809) LKW29_10710 PF00753 Metallo-beta-lactamase superfamily LKW29_10710 PF03772 Competence protein LKW29_10710 PF13567 Domain of unknown function (DUF4131) LKW29_10760 PF13538 UvrD-like helicase C-terminal domain LKW29_10775 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LKW29_10780 PF16124 RecQ zinc-binding LKW29_10780 PF00270 DEAD/DEAH box helicase LKW29_10780 PF00271 Helicase conserved C-terminal domain LKW29_10780 PF00570 HRDC domain LKW29_10780 PF09382 RQC domain LKW29_10820 PF02833 DHHA2 domain LKW29_10820 PF01368 DHH family LKW29_10825 PF18416 N-acetylglucosamine binding protein domain 2 LKW29_10825 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LKW29_10840 PF02627 Carboxymuconolactone decarboxylase family LKW29_10845 PF01235 Sodium:alanine symporter family LKW29_10850 PF00171 Aldehyde dehydrogenase family LKW29_10855 PF00701 Dihydrodipicolinate synthetase family LKW29_10860 PF05544 Proline racemase LKW29_10865 PF05544 Proline racemase LKW29_10870 PF01266 FAD dependent oxidoreductase LKW29_10875 PF02954 Bacterial regulatory protein, Fis family LKW29_10875 PF00158 Sigma-54 interaction domain LKW29_10875 PF13188 PAS domain LKW29_10890 PF07992 Pyridine nucleotide-disulphide oxidoreductase LKW29_10890 PF04324 BFD-like [2Fe-2S] binding domain LKW29_10905 PF08876 Domain of unknown function (DUF1836) LKW29_10910 PF09335 SNARE associated Golgi protein LKW29_10925 PF04914 DltD protein LKW29_10930 PF13673 Acetyltransferase (GNAT) domain LKW29_10930 PF13302 Acetyltransferase (GNAT) domain LKW29_10930 PF00117 Glutamine amidotransferase class-I LKW29_10930 PF00958 GMP synthase C terminal domain LKW29_10930 PF03352 Methyladenine glycosylase LKW29_10935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_10940 PF00877 NlpC/P60 family LKW29_10940 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain LKW29_10945 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LKW29_10945 PF13378 Enolase C-terminal domain-like LKW29_10965 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LKW29_10990 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LKW29_10990 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LKW29_10995 PF00512 His Kinase A (phospho-acceptor) domain LKW29_10995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_10995 PF00989 PAS fold LKW29_10995 PF16736 Single Cache-like LKW29_11000 PF00072 Response regulator receiver domain LKW29_11000 PF00486 Transcriptional regulatory protein, C terminal LKW29_11020 PF01048 Phosphorylase superfamily LKW29_11030 PF03808 Glycosyl transferase WecB/TagA/CpsF family LKW29_11045 PF02645 Uncharacterised protein, DegV family COG1307 LKW29_11065 PF07690 Major Facilitator Superfamily LKW29_11075 PF04519 Polymer-forming cytoskeletal LKW29_11080 PF13171 Protein of unknown function (DUF4004) LKW29_11085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_11085 PF12793 Sugar transport-related sRNA regulator N-term LKW29_11090 PF07690 Major Facilitator Superfamily LKW29_11110 PF04226 Transglycosylase associated protein LKW29_11115 PF01156 Inosine-uridine preferring nucleoside hydrolase LKW29_11125 PF08241 Methyltransferase domain LKW29_11160 PF00155 Aminotransferase class I and II LKW29_11165 PF07977 FabA-like domain LKW29_11170 PF03630 Fumble LKW29_11190 PF00005 ABC transporter LKW29_11235 PF01594 AI-2E family transporter LKW29_11250 PF00296 Luciferase-like monooxygenase LKW29_11255 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_11260 PF09084 NMT1/THI5 like LKW29_11265 PF00005 ABC transporter LKW29_11285 PF09297 NADH pyrophosphatase zinc ribbon domain LKW29_11285 PF00293 NUDIX domain LKW29_11305 PF02522 Aminoglycoside 3-N-acetyltransferase LKW29_11330 PF13536 Putative multidrug resistance efflux transporter LKW29_11335 PF12867 DinB superfamily LKW29_11355 PF08713 DNA alkylation repair enzyme LKW29_11365 PF01522 Polysaccharide deacetylase LKW29_11375 PF03741 Integral membrane protein TerC family LKW29_11380 PF00884 Sulfatase LKW29_11385 PF00005 ABC transporter LKW29_11385 PF12848 ABC transporter LKW29_11400 PF16295 Tetracyclin repressor-like, C-terminal domain LKW29_11400 PF00440 Bacterial regulatory proteins, tetR family LKW29_11410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LKW29_11415 PF02153 Prephenate dehydrogenase LKW29_11415 PF01842 ACT domain LKW29_11420 PF00155 Aminotransferase class I and II LKW29_11425 PF01264 Chorismate synthase LKW29_11430 PF00793 DAHP synthetase I family LKW29_11430 PF01817 Chorismate mutase type II LKW29_11450 PF01636 Phosphotransferase enzyme family LKW29_11465 PF01476 LysM domain LKW29_11465 PF06725 3D domain LKW29_11475 PF04542 Sigma-70 region 2 LKW29_11475 PF08281 Sigma-70, region 4 LKW29_11495 PF06039 Malate:quinone oxidoreductase (Mqo) LKW29_11500 PF13407 Periplasmic binding protein domain LKW29_11505 PF02653 Branched-chain amino acid transport system / permease component LKW29_11510 PF02653 Branched-chain amino acid transport system / permease component LKW29_11520 PF00325 Bacterial regulatory proteins, crp family LKW29_11520 PF04198 Putative sugar-binding domain LKW29_11525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LKW29_11525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LKW29_11535 PF01791 DeoC/LacD family aldolase LKW29_11555 PF03992 Antibiotic biosynthesis monooxygenase LKW29_11575 PF01773 Na+ dependent nucleoside transporter N-terminus LKW29_11575 PF07662 Na+ dependent nucleoside transporter C-terminus LKW29_11580 PF00171 Aldehyde dehydrogenase family LKW29_11585 PF01472 PUA domain LKW29_11585 PF00696 Amino acid kinase family LKW29_11590 PF14748 Pyrroline-5-carboxylate reductase dimerisation LKW29_11590 PF03807 NADP oxidoreductase coenzyme F420-dependent LKW29_11595 PF01546 Peptidase family M20/M25/M40 LKW29_11600 PF01614 Bacterial transcriptional regulator LKW29_11600 PF09339 IclR helix-turn-helix domain LKW29_11605 PF00324 Amino acid permease LKW29_11610 PF01139 tRNA-splicing ligase RtcB LKW29_11615 PF00487 Fatty acid desaturase LKW29_11620 PF00245 Alkaline phosphatase LKW29_11625 PF11188 Protein of unknown function (DUF2975) LKW29_11630 PF13443 Cro/C1-type HTH DNA-binding domain LKW29_11645 PF10086 YhfC intramembrane metalloprotease LKW29_11655 PF04397 LytTr DNA-binding domain LKW29_11655 PF00072 Response regulator receiver domain LKW29_11665 PF13302 Acetyltransferase (GNAT) domain LKW29_11670 PF12681 Glyoxalase-like domain LKW29_11690 PF17863 AAA lid domain LKW29_11690 PF07726 ATPase family associated with various cellular activities (AAA) LKW29_11705 PF07690 Major Facilitator Superfamily LKW29_11715 PF00535 Glycosyl transferase family 2 LKW29_11745 PF00202 Aminotransferase class-III LKW29_11750 PF00199 Catalase LKW29_11750 PF06628 Catalase-related immune-responsive LKW29_11760 PF01979 Amidohydrolase family LKW29_11760 PF13382 Adenine deaminase C-terminal domain LKW29_11765 PF00144 Beta-lactamase LKW29_11785 PF07726 ATPase family associated with various cellular activities (AAA) LKW29_11785 PF17863 AAA lid domain LKW29_11795 PF00881 Nitroreductase family LKW29_11800 PF01047 MarR family LKW29_11805 PF03764 Elongation factor G, domain IV LKW29_11805 PF00009 Elongation factor Tu GTP binding domain LKW29_11805 PF14492 Elongation Factor G, domain II LKW29_11805 PF00679 Elongation factor G C-terminus LKW29_11815 PF00293 NUDIX domain LKW29_11830 PF00005 ABC transporter LKW29_11835 PF00392 Bacterial regulatory proteins, gntR family LKW29_11845 PF00005 ABC transporter LKW29_11845 PF02687 FtsX-like permease family LKW29_11845 PF12704 MacB-like periplasmic core domain LKW29_11870 PF12833 Helix-turn-helix domain LKW29_11875 PF00583 Acetyltransferase (GNAT) family LKW29_11890 PF00892 EamA-like transporter family LKW29_11895 PF00155 Aminotransferase class I and II LKW29_11895 PF00392 Bacterial regulatory proteins, gntR family LKW29_11900 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LKW29_11905 PF13031 Protein of unknown function (DUF3892) LKW29_11915 PF00672 HAMP domain LKW29_11915 PF00512 His Kinase A (phospho-acceptor) domain LKW29_11920 PF00072 Response regulator receiver domain LKW29_11920 PF00486 Transcriptional regulatory protein, C terminal LKW29_11925 PF00561 alpha/beta hydrolase fold LKW29_11955 PF01925 Sulfite exporter TauE/SafE LKW29_11960 PF13302 Acetyltransferase (GNAT) domain LKW29_11965 PF00324 Amino acid permease LKW29_11975 PF08713 DNA alkylation repair enzyme LKW29_11980 PF10898 Protein of unknown function (DUF2716) LKW29_12010 PF10502 Signal peptidase, peptidase S26 LKW29_12015 PF00905 Penicillin binding protein transpeptidase domain LKW29_12015 PF03717 Penicillin-binding Protein dimerisation domain LKW29_12025 PF02146 Sir2 family LKW29_12050 PF03746 LamB/YcsF family LKW29_12060 PF02682 Carboxyltransferase domain, subdomain C and D LKW29_12065 PF01614 Bacterial transcriptional regulator LKW29_12065 PF09339 IclR helix-turn-helix domain LKW29_12070 PF10502 Signal peptidase, peptidase S26 LKW29_12075 PF03932 CutC family LKW29_12080 PF07454 Stage II sporulation protein P (SpoIIP) LKW29_12095 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LKW29_12095 PF02770 Acyl-CoA dehydrogenase, middle domain LKW29_12095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LKW29_12110 PF07670 Nucleoside recognition LKW29_12125 PF02915 Rubrerythrin LKW29_12135 PF00440 Bacterial regulatory proteins, tetR family LKW29_12140 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LKW29_12140 PF00391 PEP-utilising enzyme, mobile domain LKW29_12145 PF00753 Metallo-beta-lactamase superfamily LKW29_12160 PF07875 Coat F domain LKW29_12165 PF08892 YqcI/YcgG family LKW29_12170 PF01810 LysE type translocator LKW29_12185 PF00269 Small, acid-soluble spore proteins, alpha/beta type LKW29_12190 PF10710 Protein of unknown function (DUF2512) LKW29_12195 PF11553 Protein of unknown function (DUF3231) LKW29_12200 PF00269 Small, acid-soluble spore proteins, alpha/beta type LKW29_12205 PF00107 Zinc-binding dehydrogenase LKW29_12205 PF08240 Alcohol dehydrogenase GroES-like domain LKW29_12205 PF13823 Alcohol dehydrogenase GroES-associated LKW29_12220 PF10415 Fumarase C C-terminus LKW29_12220 PF00206 Lyase LKW29_12225 PF00710 Asparaginase, N-terminal LKW29_12225 PF17763 Glutaminase/Asparaginase C-terminal domain LKW29_12230 PF01381 Helix-turn-helix LKW29_12240 PF01541 GIY-YIG catalytic domain LKW29_12240 PF12826 Helix-hairpin-helix motif LKW29_12240 PF02151 UvrB/uvrC motif LKW29_12240 PF08459 UvrC Helix-hairpin-helix N-terminal LKW29_12245 PF13520 Amino acid permease LKW29_12250 PF05525 Branched-chain amino acid transport protein LKW29_12255 PF14748 Pyrroline-5-carboxylate reductase dimerisation LKW29_12255 PF03807 NADP oxidoreductase coenzyme F420-dependent LKW29_12260 PF13564 DoxX-like family LKW29_12265 PF03949 Malic enzyme, NAD binding domain LKW29_12265 PF00390 Malic enzyme, N-terminal domain LKW29_12280 PF03845 Spore germination protein LKW29_12290 PF00072 Response regulator receiver domain LKW29_12290 PF08664 YcbB domain LKW29_12300 PF04960 Glutaminase LKW29_12305 PF01235 Sodium:alanine symporter family LKW29_12335 PF17936 Bacterial Ig domain LKW29_12335 PF02872 5'-nucleotidase, C-terminal domain LKW29_12335 PF00149 Calcineurin-like phosphoesterase LKW29_12340 PF00199 Catalase LKW29_12340 PF06628 Catalase-related immune-responsive LKW29_12345 PF00561 alpha/beta hydrolase fold LKW29_12350 PF00857 Isochorismatase family LKW29_12365 PF01979 Amidohydrolase family LKW29_12370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LKW29_12370 PF03466 LysR substrate binding domain LKW29_12380 PF01544 CorA-like Mg2+ transporter protein LKW29_12395 PF11181 Heat induced stress protein YflT LKW29_12415 PF03073 TspO/MBR family LKW29_12420 PF00875 DNA photolyase LKW29_12420 PF03441 FAD binding domain of DNA photolyase LKW29_12430 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) LKW29_12435 PF00361 Proton-conducting membrane transporter LKW29_12435 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LKW29_12440 PF10057 Uncharacterized conserved protein (DUF2294) LKW29_12455 PF01040 UbiA prenyltransferase family LKW29_12460 PF00561 alpha/beta hydrolase fold LKW29_12465 PF01297 Zinc-uptake complex component A periplasmic LKW29_12470 PF00950 ABC 3 transport family LKW29_12475 PF00005 ABC transporter LKW29_12500 PF01451 Low molecular weight phosphotyrosine protein phosphatase LKW29_12505 PF01758 Sodium Bile acid symporter family LKW29_12510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LKW29_12515 PF01022 Bacterial regulatory protein, arsR family LKW29_12530 PF00012 Hsp70 protein LKW29_12545 PF01037 Lrp/AsnC ligand binding domain LKW29_12560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LKW29_12580 PF02805 Metal binding domain of Ada LKW29_12580 PF12833 Helix-turn-helix domain LKW29_12590 PF00144 Beta-lactamase LKW29_12615 PF12802 MarR family LKW29_12620 PF00067 Cytochrome P450 LKW29_12620 PF00175 Oxidoreductase NAD-binding domain LKW29_12620 PF00258 Flavodoxin LKW29_12620 PF00667 FAD binding domain LKW29_12625 PF07690 Major Facilitator Superfamily LKW29_12650 PF00072 Response regulator receiver domain LKW29_12650 PF00486 Transcriptional regulatory protein, C terminal LKW29_12655 PF00672 HAMP domain LKW29_12655 PF00512 His Kinase A (phospho-acceptor) domain LKW29_12655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_12680 PF00291 Pyridoxal-phosphate dependent enzyme LKW29_12700 PF01381 Helix-turn-helix LKW29_12715 PF00753 Metallo-beta-lactamase superfamily LKW29_12720 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LKW29_12730 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LKW29_12730 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LKW29_12735 PF04072 Leucine carboxyl methyltransferase LKW29_12750 PF00005 ABC transporter LKW29_12755 PF02687 FtsX-like permease family LKW29_12770 PF00512 His Kinase A (phospho-acceptor) domain LKW29_12770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_12770 PF00672 HAMP domain LKW29_12775 PF00486 Transcriptional regulatory protein, C terminal LKW29_12775 PF00072 Response regulator receiver domain LKW29_12785 PF01047 MarR family LKW29_12795 PF04299 Putative FMN-binding domain LKW29_12800 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LKW29_12800 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LKW29_12805 PF07690 Major Facilitator Superfamily LKW29_12810 PF02589 LUD domain LKW29_12815 PF11870 Domain of unknown function (DUF3390) LKW29_12815 PF13183 4Fe-4S dicluster domain LKW29_12815 PF02589 LUD domain LKW29_12820 PF02754 Cysteine-rich domain LKW29_12825 PF03466 LysR substrate binding domain LKW29_12825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LKW29_12835 PF17676 LD-carboxypeptidase C-terminal domain LKW29_12835 PF02016 LD-carboxypeptidase N-terminal domain LKW29_12865 PF05116 Sucrose-6F-phosphate phosphohydrolase LKW29_12875 PF00356 Bacterial regulatory proteins, lacI family LKW29_12880 PF18801 response regulator aspartate phosphatase H, N terminal LKW29_12900 PF11798 IMS family HHH motif LKW29_12900 PF11799 impB/mucB/samB family C-terminal domain LKW29_12900 PF00817 impB/mucB/samB family LKW29_12915 PF02743 Cache domain LKW29_12915 PF00672 HAMP domain LKW29_12915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LKW29_12930 PF01554 MatE LKW29_12940 PF08453 Peptidase family M9 N-terminal LKW29_12940 PF01752 Collagenase LKW29_12940 PF18496 Collagenase G catalytic helper subdomain LKW29_12950 PF07690 Major Facilitator Superfamily LKW29_12955 PF16859 Tetracyclin repressor-like, C-terminal domain LKW29_12955 PF00440 Bacterial regulatory proteins, tetR family LKW29_12965 PF01022 Bacterial regulatory protein, arsR family LKW29_12975 PF03313 Serine dehydratase alpha chain LKW29_12980 PF01842 ACT domain LKW29_12980 PF03315 Serine dehydratase beta chain LKW29_12990 PF00202 Aminotransferase class-III LKW29_12995 PF07503 HypF finger LKW29_12995 PF01300 Telomere recombination LKW29_12995 PF17788 HypF Kae1-like domain LKW29_12995 PF00708 Acylphosphatase LKW29_13000 PF00586 AIR synthase related protein, N-terminal domain LKW29_13000 PF02769 AIR synthase related protein, C-terminal domain LKW29_13010 PF01037 Lrp/AsnC ligand binding domain LKW29_13015 PF13520 Amino acid permease LKW29_13035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LKW29_13035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LKW29_13035 PF01842 ACT domain LKW29_13040 PF00266 Aminotransferase class-V LKW29_13055 PF04542 Sigma-70 region 2 LKW29_13055 PF08281 Sigma-70, region 4 LKW29_13070 PF07883 Cupin domain LKW29_13075 PF12833 Helix-turn-helix domain LKW29_13075 PF01497 Periplasmic binding protein LKW29_13080 PF01804 Penicillin amidase LKW29_13120 PF14044 NETI protein LKW29_13125 PF07690 Major Facilitator Superfamily LKW29_13130 PF12697 Alpha/beta hydrolase family LKW29_13135 PF01047 MarR family LKW29_13140 PF07690 Major Facilitator Superfamily LKW29_13150 PF12679 ABC-2 family transporter protein LKW29_13155 PF00005 ABC transporter LKW29_13155 PF13732 Domain of unknown function (DUF4162) LKW29_13160 PF13396 Phospholipase_D-nuclease N-terminal LKW29_13170 PF17314 Family of unknown function (DUF5360) LKW29_13175 PF00893 Small Multidrug Resistance protein LKW29_13180 PF00440 Bacterial regulatory proteins, tetR family LKW29_13185 PF17440 Thiol-activated cytolysin beta sandwich domain LKW29_13185 PF01289 Thiol-activated cytolysin LKW29_13190 PF02667 Short chain fatty acid transporter LKW29_13200 PF02525 Flavodoxin-like fold LKW29_13230 PF00005 ABC transporter LKW29_13235 PF02361 Cobalt transport protein LKW29_13250 PF03737 Aldolase/RraA LKW29_13255 PF03606 C4-dicarboxylate anaerobic carrier LKW29_13260 PF04231 Endonuclease I LKW29_13275 PF01381 Helix-turn-helix LKW29_13280 PF02660 Glycerol-3-phosphate acyltransferase LKW29_13285 PF04073 Aminoacyl-tRNA editing domain LKW29_13290 PF13393 Histidyl-tRNA synthetase LKW29_13290 PF03129 Anticodon binding domain LKW29_13305 PF01638 HxlR-like helix-turn-helix LKW29_13310 PF00881 Nitroreductase family LKW29_13320 PF02887 Pyruvate kinase, alpha/beta domain LKW29_13320 PF00224 Pyruvate kinase, barrel domain LKW29_13320 PF00391 PEP-utilising enzyme, mobile domain LKW29_13340 PF00005 ABC transporter LKW29_13365 PF13419 Haloacid dehalogenase-like hydrolase LKW29_13375 PF13350 Tyrosine phosphatase family LKW29_13400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LKW29_13405 PF00480 ROK family LKW29_13410 PF07690 Major Facilitator Superfamily LKW29_13415 PF12464 Maltose acetyltransferase LKW29_13415 PF14602 Hexapeptide repeat of succinyl-transferase LKW29_13425 PF00005 ABC transporter LKW29_13425 PF02687 FtsX-like permease family LKW29_13425 PF12704 MacB-like periplasmic core domain LKW29_13435 PF00579 tRNA synthetases class I (W and Y) LKW29_13440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LKW29_13440 PF13288 DXP reductoisomerase C-terminal domain LKW29_13440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LKW29_13445 PF01594 AI-2E family transporter LKW29_13465 PF08241 Methyltransferase domain LKW29_13475 PF07690 Major Facilitator Superfamily LKW29_13495 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LKW29_13505 PF03471 Transporter associated domain LKW29_13505 PF01595 Cyclin M transmembrane N-terminal domain LKW29_13505 PF00571 CBS domain LKW29_13510 PF13411 MerR HTH family regulatory protein LKW29_13515 PF00892 EamA-like transporter family LKW29_13520 PF00805 Pentapeptide repeats (8 copies) LKW29_13525 PF06906 Protein of unknown function (DUF1272) LKW29_13530 PF10282 Lactonase, 7-bladed beta-propeller LKW29_13535 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LKW29_13535 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LKW29_13540 PF02447 GntP family permease LKW29_13545 PF00923 Transaldolase/Fructose-6-phosphate aldolase LKW29_13550 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LKW29_13550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LKW29_13555 PF02780 Transketolase, C-terminal domain LKW29_13555 PF00456 Transketolase, thiamine diphosphate binding domain LKW29_13555 PF02779 Transketolase, pyrimidine binding domain LKW29_13560 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LKW29_13560 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LKW29_13565 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LKW29_13565 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LKW29_13570 PF00107 Zinc-binding dehydrogenase LKW29_13570 PF08240 Alcohol dehydrogenase GroES-like domain LKW29_13575 PF00296 Luciferase-like monooxygenase LKW29_13585 PF08659 KR domain LKW29_13585 PF02801 Beta-ketoacyl synthase, C-terminal domain LKW29_13585 PF00109 Beta-ketoacyl synthase, N-terminal domain LKW29_13585 PF16197 Ketoacyl-synthetase C-terminal extension LKW29_13585 PF08240 Alcohol dehydrogenase GroES-like domain LKW29_13585 PF00698 Acyl transferase domain LKW29_13585 PF00550 Phosphopantetheine attachment site LKW29_13585 PF14765 Polyketide synthase dehydratase LKW29_13590 PF00106 short chain dehydrogenase LKW29_13595 PF07504 Fungalysin/Thermolysin Propeptide Motif LKW29_13595 PF03413 Peptidase propeptide and YPEB domain LKW29_13595 PF01447 Thermolysin metallopeptidase, catalytic domain LKW29_13595 PF02868 Thermolysin metallopeptidase, alpha-helical domain LKW29_13615 PF00248 Aldo/keto reductase family LKW29_13620 PF07690 Major Facilitator Superfamily LKW29_13630 PF03928 Haem-degrading LKW29_13635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LKW29_13665 PF03960 ArsC family LKW29_13670 PF01638 HxlR-like helix-turn-helix LKW29_13675 PF07702 UTRA domain LKW29_13675 PF00392 Bacterial regulatory proteins, gntR family LKW29_13680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LKW29_13680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LKW29_13690 PF01638 HxlR-like helix-turn-helix LKW29_13695 PF01638 HxlR-like helix-turn-helix LKW29_13700 PF00248 Aldo/keto reductase family LKW29_13730 PF02567 Phenazine biosynthesis-like protein LKW29_13750 PF00501 AMP-binding enzyme LKW29_13750 PF13193 AMP-binding enzyme C-terminal domain LKW29_13760 PF01638 HxlR-like helix-turn-helix LKW29_13775 PF01022 Bacterial regulatory protein, arsR family LKW29_13785 PF12791 Anti-sigma factor N-terminus LKW29_13790 PF04542 Sigma-70 region 2 LKW29_13805 PF00440 Bacterial regulatory proteins, tetR family LKW29_13825 PF05656 Protein of unknown function (DUF805) LKW29_13830 PF01061 ABC-2 type transporter LKW29_13835 PF00005 ABC transporter LKW29_13835 PF13732 Domain of unknown function (DUF4162) LKW29_13850 PF03063 Prismane/CO dehydrogenase family LKW29_13860 PF00753 Metallo-beta-lactamase superfamily LKW29_13865 PF01183 Glycosyl hydrolases family 25 LKW29_13865 PF01471 Putative peptidoglycan binding domain LKW29_13890 PF00144 Beta-lactamase LKW29_13930 PF00753 Metallo-beta-lactamase superfamily LKW29_13935 PF00107 Zinc-binding dehydrogenase LKW29_13935 PF08240 Alcohol dehydrogenase GroES-like domain LKW29_13940 PF00324 Amino acid permease LKW29_13945 PF07690 Major Facilitator Superfamily LKW29_13970 PF02585 GlcNAc-PI de-N-acetylase LKW29_13975 PF08830 Protein of unknown function (DUF1806) LKW29_13980 PF03600 Citrate transporter LKW29_14005 PF01032 FecCD transport family LKW29_14010 PF01032 FecCD transport family LKW29_14020 PF02567 Phenazine biosynthesis-like protein LKW29_14025 PF13170 Protein of unknown function (DUF4003) LKW29_14040 PF10901 Protein of unknown function (DUF2690) LKW29_14050 PF03466 LysR substrate binding domain LKW29_14050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LKW29_14055 PF08240 Alcohol dehydrogenase GroES-like domain LKW29_14055 PF00107 Zinc-binding dehydrogenase LKW29_14070 PF01713 Smr domain LKW29_14070 PF00488 MutS domain V LKW29_14085 PF00797 N-acetyltransferase LKW29_14090 PF08439 Oligopeptidase F LKW29_14090 PF01432 Peptidase family M3 LKW29_14095 PF00144 Beta-lactamase LKW29_14110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LKW29_14110 PF03466 LysR substrate binding domain LKW29_14125 PF03009 Glycerophosphoryl diester phosphodiesterase family LKW29_14145 PF01494 FAD binding domain LKW29_14150 PF01022 Bacterial regulatory protein, arsR family LKW29_14155 PF00107 Zinc-binding dehydrogenase LKW29_14155 PF08240 Alcohol dehydrogenase GroES-like domain LKW29_14160 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LKW29_14175 PF04299 Putative FMN-binding domain LKW29_14190 PF01758 Sodium Bile acid symporter family LKW29_14195 PF01565 FAD binding domain LKW29_14195 PF02913 FAD linked oxidases, C-terminal domain LKW29_14215 PF00132 Bacterial transferase hexapeptide (six repeats) LKW29_14225 PF00535 Glycosyl transferase family 2 LKW29_14230 PF00378 Enoyl-CoA hydratase/isomerase LKW29_14235 PF18496 Collagenase G catalytic helper subdomain LKW29_14235 PF01752 Collagenase LKW29_14235 PF08453 Peptidase family M9 N-terminal LKW29_14240 PF02308 MgtC family LKW29_14255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LKW29_14260 PF04294 VanW like protein LKW29_14270 PF13037 Domain of unknown function (DUF3898) LKW29_14270 PF13039 Protein of unknown function (DUF3900) LKW29_14290 PF00313 'Cold-shock' DNA-binding domain LKW29_14300 PF00258 Flavodoxin LKW29_14310 PF00293 NUDIX domain LKW29_14320 PF00132 Bacterial transferase hexapeptide (six repeats) LKW29_14330 PF00106 short chain dehydrogenase LKW29_14350 PF01156 Inosine-uridine preferring nucleoside hydrolase LKW29_14355 PF00474 Sodium:solute symporter family LKW29_14365 PF00171 Aldehyde dehydrogenase family LKW29_14375 PF14151 YfhD-like protein LKW29_14380 PF13249 Squalene-hopene cyclase N-terminal domain LKW29_14380 PF13243 Squalene-hopene cyclase C-terminal domain LKW29_14385 PF02681 Divergent PAP2 family LKW29_14390 PF00892 EamA-like transporter family LKW29_14395 PF06961 Protein of unknown function (DUF1294) LKW29_14410 PF10609 NUBPL iron-transfer P-loop NTPase LKW29_14420 PF02391 MoaE protein LKW29_14425 PF00994 Probable molybdopterin binding domain LKW29_14425 PF03454 MoeA C-terminal region (domain IV) LKW29_14425 PF03453 MoeA N-terminal region (domain I and II) LKW29_14430 PF00899 ThiF family LKW29_14435 PF01226 Formate/nitrite transporter LKW29_14440 PF04055 Radical SAM superfamily LKW29_14440 PF06463 Molybdenum Cofactor Synthesis C LKW29_14445 PF02634 FdhD/NarQ family LKW29_14450 PF10057 Uncharacterized conserved protein (DUF2294) LKW29_14455 PF07849 Protein of unknown function (DUF1641) LKW29_14460 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LKW29_14460 PF00384 Molybdopterin oxidoreductase LKW29_14460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LKW29_14460 PF00037 4Fe-4S binding domain LKW29_14460 PF01568 Molydopterin dinucleotide binding domain LKW29_14470 PF03323 Bacillus/Clostridium GerA spore germination protein LKW29_14510 PF08241 Methyltransferase domain LKW29_14515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_14520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_14525 PF00375 Sodium:dicarboxylate symporter family LKW29_14530 PF03816 Cell envelope-related transcriptional attenuator domain LKW29_14540 PF04542 Sigma-70 region 2 LKW29_14540 PF08281 Sigma-70, region 4 LKW29_14560 PF00005 ABC transporter LKW29_14560 PF13732 Domain of unknown function (DUF4162) LKW29_14570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LKW29_14570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LKW29_14575 PF03989 DNA gyrase C-terminal domain, beta-propeller LKW29_14575 PF00521 DNA gyrase/topoisomerase IV, subunit A LKW29_14580 PF00204 DNA gyrase B LKW29_14580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_14580 PF01751 Toprim domain LKW29_14580 PF00986 DNA gyrase B subunit, carboxyl terminus LKW29_14585 PF13380 CoA binding domain LKW29_14590 PF13180 PDZ domain LKW29_14595 PF00072 Response regulator receiver domain LKW29_14595 PF00486 Transcriptional regulatory protein, C terminal LKW29_14605 PF03477 ATP cone domain LKW29_14605 PF13597 Anaerobic ribonucleoside-triphosphate reductase LKW29_14610 PF02660 Glycerol-3-phosphate acyltransferase LKW29_14615 PF01521 Iron-sulphur cluster biosynthesis LKW29_14620 PF03061 Thioesterase superfamily LKW29_14625 PF00704 Glycosyl hydrolases family 18 LKW29_14625 PF01476 LysM domain LKW29_14635 PF08177 Small acid-soluble spore protein N family LKW29_14640 PF13040 Fur-regulated basic protein B LKW29_14645 PF02811 PHP domain LKW29_14645 PF00929 Exonuclease LKW29_14645 PF01336 OB-fold nucleic acid binding domain LKW29_14645 PF14579 Helix-hairpin-helix motif LKW29_14645 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LKW29_14645 PF07733 Bacterial DNA polymerase III alpha NTPase domain LKW29_14645 PF11490 DNA polymerase III polC-type N-terminus II LKW29_14650 PF00578 AhpC/TSA family LKW29_14660 PF00664 ABC transporter transmembrane region LKW29_14660 PF00005 ABC transporter LKW29_14660 PF03412 Peptidase C39 family LKW29_14665 PF00330 Aconitase family (aconitate hydratase) LKW29_14665 PF00694 Aconitase C-terminal domain LKW29_14675 PF01522 Polysaccharide deacetylase LKW29_14705 PF01411 tRNA synthetases class II (A) LKW29_14705 PF02272 DHHA1 domain LKW29_14705 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LKW29_14710 PF00293 NUDIX domain LKW29_14710 PF13344 Haloacid dehalogenase-like hydrolase LKW29_14720 PF00108 Thiolase, N-terminal domain LKW29_14720 PF02803 Thiolase, C-terminal domain LKW29_14725 PF00501 AMP-binding enzyme LKW29_14725 PF13193 AMP-binding enzyme C-terminal domain LKW29_14730 PF02632 BioY family LKW29_14735 PF00501 AMP-binding enzyme LKW29_14735 PF13193 AMP-binding enzyme C-terminal domain LKW29_14755 PF05532 CsbD-like LKW29_14785 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LKW29_14785 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LKW29_14795 PF00989 PAS fold LKW29_14795 PF13188 PAS domain LKW29_14795 PF13426 PAS domain LKW29_14795 PF00512 His Kinase A (phospho-acceptor) domain LKW29_14795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_14800 PF01738 Dienelactone hydrolase family LKW29_14805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LKW29_14810 PF00474 Sodium:solute symporter family LKW29_14815 PF01645 Conserved region in glutamate synthase LKW29_14820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LKW29_14825 PF02559 CarD-like/TRCF domain LKW29_14830 PF00491 Arginase family LKW29_14835 PF01979 Amidohydrolase family LKW29_14840 PF17392 Urocanase C-terminal domain LKW29_14840 PF17391 Urocanase N-terminal domain LKW29_14840 PF01175 Urocanase Rossmann-like domain LKW29_14845 PF00221 Aromatic amino acid lyase LKW29_14850 PF09021 HutP LKW29_14855 PF01209 ubiE/COQ5 methyltransferase family LKW29_14875 PF11084 Protein of unknown function (DUF2621) LKW29_14890 PF07301 Protein of unknown function (DUF1453) LKW29_14895 PF02683 Cytochrome C biogenesis protein transmembrane region LKW29_14905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LKW29_14905 PF03466 LysR substrate binding domain LKW29_14910 PF03788 LrgA family LKW29_14915 PF04172 LrgB-like family LKW29_14940 PF01471 Putative peptidoglycan binding domain LKW29_14940 PF01510 N-acetylmuramoyl-L-alanine amidase LKW29_14955 PF00664 ABC transporter transmembrane region LKW29_14955 PF00005 ABC transporter LKW29_14960 PF00664 ABC transporter transmembrane region LKW29_14960 PF00005 ABC transporter LKW29_14965 PF03672 Uncharacterised protein family (UPF0154) LKW29_14970 PF10747 Sporulation inhibitor of replication protein SirA LKW29_14975 PF02779 Transketolase, pyrimidine binding domain LKW29_14975 PF00456 Transketolase, thiamine diphosphate binding domain LKW29_14975 PF02780 Transketolase, C-terminal domain LKW29_14985 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_14990 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_14995 PF00005 ABC transporter LKW29_15010 PF05979 Bacterial protein of unknown function (DUF896) LKW29_15015 PF00239 Resolvase, N terminal domain LKW29_15020 PF00717 Peptidase S24-like LKW29_15020 PF01726 LexA DNA binding domain LKW29_15035 PF03551 Transcriptional regulator PadR-like family LKW29_15075 PF01510 N-acetylmuramoyl-L-alanine amidase LKW29_15075 PF01476 LysM domain LKW29_15075 PF01471 Putative peptidoglycan binding domain LKW29_15080 PF05105 Bacteriophage holin family LKW29_15225 PF08281 Sigma-70, region 4 LKW29_15270 PF02511 Thymidylate synthase complementing protein LKW29_15275 PF00145 C-5 cytosine-specific DNA methylase LKW29_15350 PF01381 Helix-turn-helix LKW29_15370 PF00589 Phage integrase family LKW29_15370 PF02899 Phage integrase, N-terminal SAM-like domain LKW29_15375 PF03951 Glutamine synthetase, beta-Grasp domain LKW29_15375 PF00120 Glutamine synthetase, catalytic domain LKW29_15380 PF13411 MerR HTH family regulatory protein LKW29_15385 PF06838 Methionine gamma-lyase LKW29_15390 PF01926 50S ribosome-binding GTPase LKW29_15390 PF16360 GTP-binding GTPase Middle Region LKW29_15390 PF13167 GTP-binding GTPase N-terminal LKW29_15395 PF03458 UPF0126 domain LKW29_15400 PF00004 ATPase family associated with various cellular activities (AAA) LKW29_15400 PF17866 AAA lid domain LKW29_15415 PF17209 Hfq protein LKW29_15430 PF01476 LysM domain LKW29_15430 PF06725 3D domain LKW29_15435 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LKW29_15435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LKW29_15445 PF00455 DeoR C terminal sensor domain LKW29_15445 PF08220 DeoR-like helix-turn-helix domain LKW29_15455 PF04238 Protein of unknown function (DUF420) LKW29_15465 PF00324 Amino acid permease LKW29_15470 PF00704 Glycosyl hydrolases family 18 LKW29_15470 PF00041 Fibronectin type III domain LKW29_15480 PF00149 Calcineurin-like phosphoesterase LKW29_15480 PF10518 TAT (twin-arginine translocation) pathway signal sequence LKW29_15485 PF01226 Formate/nitrite transporter LKW29_15490 PF00216 Bacterial DNA-binding protein LKW29_15495 PF00403 Heavy-metal-associated domain LKW29_15500 PF00403 Heavy-metal-associated domain LKW29_15505 PF02583 Metal-sensitive transcriptional repressor LKW29_15515 PF00756 Putative esterase LKW29_15520 PF00005 ABC transporter LKW29_15525 PF01032 FecCD transport family LKW29_15530 PF01032 FecCD transport family LKW29_15545 PF12833 Helix-turn-helix domain LKW29_15545 PF02805 Metal binding domain of Ada LKW29_15550 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LKW29_15550 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LKW29_15555 PF00730 HhH-GPD superfamily base excision DNA repair protein LKW29_15555 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain LKW29_15560 PF01546 Peptidase family M20/M25/M40 LKW29_15560 PF07687 Peptidase dimerisation domain LKW29_15585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LKW29_15600 PF10787 Uncharacterised protein from bacillus cereus group LKW29_15605 PF04172 LrgB-like family LKW29_15610 PF03788 LrgA family LKW29_15615 PF00155 Aminotransferase class I and II LKW29_15615 PF00392 Bacterial regulatory proteins, gntR family LKW29_15620 PF00561 alpha/beta hydrolase fold LKW29_15620 PF00364 Biotin-requiring enzyme LKW29_15625 PF02585 GlcNAc-PI de-N-acetylase LKW29_15640 PF00388 Phosphatidylinositol-specific phospholipase C, X domain LKW29_15645 PF00082 Subtilase family LKW29_15650 PF07486 Cell Wall Hydrolase LKW29_15655 PF03275 UDP-galactopyranose mutase LKW29_15660 PF00884 Sulfatase LKW29_15665 PF00350 Dynamin family LKW29_15675 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LKW29_15680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_15680 PF00512 His Kinase A (phospho-acceptor) domain LKW29_15685 PF00486 Transcriptional regulatory protein, C terminal LKW29_15685 PF00072 Response regulator receiver domain LKW29_15700 PF00005 ABC transporter LKW29_15705 PF08676 MutL C terminal dimerisation domain LKW29_15705 PF01119 DNA mismatch repair protein, C-terminal domain LKW29_15710 PF01624 MutS domain I LKW29_15710 PF05192 MutS domain III LKW29_15710 PF05190 MutS family domain IV LKW29_15710 PF00488 MutS domain V LKW29_15710 PF05188 MutS domain II LKW29_15715 PF10628 Outer spore coat protein E (CotE) LKW29_15720 PF06133 Control of competence regulator ComK, YlbF/YmcA LKW29_15725 PF04055 Radical SAM superfamily LKW29_15725 PF00919 Uncharacterized protein family UPF0004 LKW29_15725 PF01938 TRAM domain LKW29_15730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LKW29_15735 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LKW29_15735 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LKW29_15735 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LKW29_15740 PF01244 Membrane dipeptidase (Peptidase family M19) LKW29_15745 PF04232 Stage V sporulation protein S (SpoVS) LKW29_15750 PF13277 YmdB-like protein LKW29_15755 PF12072 Domain of unknown function (DUF3552) LKW29_15755 PF00013 KH domain LKW29_15755 PF01966 HD domain LKW29_15770 PF18146 Damage-inducible protein CinA KH domain LKW29_15770 PF02464 Competence-damaged protein LKW29_15770 PF00994 Probable molybdopterin binding domain LKW29_15775 PF01066 CDP-alcohol phosphatidyltransferase LKW29_15780 PF13464 Domain of unknown function (DUF4115) LKW29_15785 PF11868 Protein of unknown function (DUF3388) LKW29_15790 PF11588 Protein of unknown function (DUF3243) LKW29_15800 PF00675 Insulinase (Peptidase family M16) LKW29_15800 PF05193 Peptidase M16 inactive domain LKW29_15805 PF05193 Peptidase M16 inactive domain LKW29_15810 PF02653 Branched-chain amino acid transport system / permease component LKW29_15820 PF00005 ABC transporter LKW29_15825 PF02608 ABC transporter substrate-binding protein PnrA-like LKW29_15830 PF00392 Bacterial regulatory proteins, gntR family LKW29_15830 PF07702 UTRA domain LKW29_15835 PF01580 FtsK/SpoIIIE family LKW29_15835 PF17854 FtsK alpha domain LKW29_15835 PF09397 Ftsk gamma domain LKW29_15840 PF14035 YlzJ-like protein LKW29_15845 PF00574 Clp protease LKW29_15850 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LKW29_15850 PF17770 Ribonuclease J C-terminal domain LKW29_15850 PF00753 Metallo-beta-lactamase superfamily LKW29_15855 PF00701 Dihydrodipicolinate synthetase family LKW29_15860 PF13840 ACT domain LKW29_15860 PF00696 Amino acid kinase family LKW29_15865 PF02774 Semialdehyde dehydrogenase, dimerisation domain LKW29_15865 PF01118 Semialdehyde dehydrogenase, NAD binding domain LKW29_15870 PF02441 Flavoprotein LKW29_15875 PF16924 Dipicolinate synthase subunit A N-terminal domain LKW29_15875 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LKW29_15880 PF05239 PRC-barrel domain LKW29_15885 PF05193 Peptidase M16 inactive domain LKW29_15885 PF00675 Insulinase (Peptidase family M16) LKW29_15890 PF01522 Polysaccharide deacetylase LKW29_15895 PF00013 KH domain LKW29_15895 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LKW29_15895 PF01138 3' exoribonuclease family, domain 1 LKW29_15895 PF03725 3' exoribonuclease family, domain 2 LKW29_15895 PF00575 S1 RNA binding domain LKW29_15900 PF00312 Ribosomal protein S15 LKW29_15905 PF06574 FAD synthetase LKW29_15905 PF01687 Riboflavin kinase LKW29_15910 PF01509 TruB family pseudouridylate synthase (N terminal domain) LKW29_15910 PF16198 tRNA pseudouridylate synthase B C-terminal domain LKW29_15915 PF02033 Ribosome-binding factor A LKW29_15920 PF04456 Protein of unknown function (DUF503) LKW29_15925 PF04760 Translation initiation factor IF-2, N-terminal region LKW29_15925 PF11987 Translation-initiation factor 2 LKW29_15925 PF00009 Elongation factor Tu GTP binding domain LKW29_15930 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LKW29_15935 PF04296 Protein of unknown function (DUF448) LKW29_15940 PF08529 NusA N-terminal domain LKW29_15940 PF00575 S1 RNA binding domain LKW29_15940 PF13184 NusA-like KH domain LKW29_15945 PF17384 RimP C-terminal SH3 domain LKW29_15945 PF02576 RimP N-terminal domain LKW29_15950 PF14480 DNA polymerase III polC-type N-terminus I LKW29_15950 PF11490 DNA polymerase III polC-type N-terminus II LKW29_15950 PF07733 Bacterial DNA polymerase III alpha NTPase domain LKW29_15950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LKW29_15950 PF14579 Helix-hairpin-helix motif LKW29_15950 PF02811 PHP domain LKW29_15950 PF00929 Exonuclease LKW29_15955 PF04073 Aminoacyl-tRNA editing domain LKW29_15955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LKW29_15955 PF03129 Anticodon binding domain LKW29_15960 PF17820 PDZ domain LKW29_15960 PF02163 Peptidase family M50 LKW29_15965 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LKW29_15965 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LKW29_15965 PF13288 DXP reductoisomerase C-terminal domain LKW29_15975 PF01255 Putative undecaprenyl diphosphate synthase LKW29_15980 PF01765 Ribosome recycling factor LKW29_15985 PF00696 Amino acid kinase family LKW29_15990 PF00889 Elongation factor TS LKW29_15995 PF00318 Ribosomal protein S2 LKW29_16000 PF06018 CodY GAF-like domain LKW29_16000 PF08222 CodY helix-turn-helix domain LKW29_16005 PF00004 ATPase family associated with various cellular activities (AAA) LKW29_16005 PF07724 AAA domain (Cdc48 subfamily) LKW29_16005 PF10431 C-terminal, D2-small domain, of ClpB protein LKW29_16010 PF00227 Proteasome subunit LKW29_16015 PF02899 Phage integrase, N-terminal SAM-like domain LKW29_16015 PF00589 Phage integrase family LKW29_16020 PF01134 Glucose inhibited division protein A LKW29_16025 PF01396 Topoisomerase DNA binding C4 zinc finger LKW29_16025 PF01131 DNA topoisomerase LKW29_16025 PF01751 Toprim domain LKW29_16035 PF02629 CoA binding domain LKW29_16035 PF00549 CoA-ligase LKW29_16040 PF00549 CoA-ligase LKW29_16040 PF08442 ATP-grasp domain LKW29_16045 PF01351 Ribonuclease HII LKW29_16050 PF01926 50S ribosome-binding GTPase LKW29_16055 PF10502 Signal peptidase, peptidase S26 LKW29_16060 PF01245 Ribosomal protein L19 LKW29_16065 PF01746 tRNA (Guanine-1)-methyltransferase LKW29_16070 PF01782 RimM N-terminal domain LKW29_16070 PF05239 PRC-barrel domain LKW29_16080 PF00886 Ribosomal protein S16 LKW29_16085 PF02978 Signal peptide binding domain LKW29_16085 PF00448 SRP54-type protein, GTPase domain LKW29_16085 PF02881 SRP54-type protein, helical bundle domain LKW29_16090 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LKW29_16095 PF02881 SRP54-type protein, helical bundle domain LKW29_16095 PF00448 SRP54-type protein, GTPase domain LKW29_16100 PF06470 SMC proteins Flexible Hinge Domain LKW29_16100 PF02463 RecF/RecN/SMC N terminal domain LKW29_16105 PF00035 Double-stranded RNA binding motif LKW29_16105 PF14622 Ribonuclease-III-like LKW29_16110 PF00550 Phosphopantetheine attachment site LKW29_16120 PF00698 Acyl transferase domain LKW29_16125 PF02504 Fatty acid synthesis protein LKW29_16130 PF03061 Thioesterase superfamily LKW29_16135 PF00271 Helicase conserved C-terminal domain LKW29_16135 PF17191 RecG wedge domain LKW29_16135 PF00270 DEAD/DEAH box helicase LKW29_16140 PF02734 DAK2 domain LKW29_16140 PF13684 Dihydroxyacetone kinase family LKW29_16145 PF03780 Asp23 family, cell envelope-related function LKW29_16150 PF00830 Ribosomal L28 family LKW29_16155 PF08183 Stage V sporulation protein family LKW29_16160 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LKW29_16160 PF04263 Thiamin pyrophosphokinase, catalytic domain LKW29_16165 PF00834 Ribulose-phosphate 3 epimerase family LKW29_16170 PF03193 RsgA GTPase LKW29_16170 PF16745 RsgA N-terminal domain LKW29_16175 PF03793 PASTA domain LKW29_16175 PF00069 Protein kinase domain LKW29_16185 PF04055 Radical SAM superfamily LKW29_16190 PF01029 NusB family LKW29_16190 PF01189 16S rRNA methyltransferase RsmB/F LKW29_16195 PF02911 Formyl transferase, C-terminal domain LKW29_16195 PF00551 Formyl transferase LKW29_16200 PF01327 Polypeptide deformylase LKW29_16205 PF04851 Type III restriction enzyme, res subunit LKW29_16205 PF18074 Primosomal protein N C-terminal domain LKW29_16205 PF17764 3′ DNA-binding domain (3′BD) LKW29_16205 PF00271 Helicase conserved C-terminal domain LKW29_16205 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LKW29_16210 PF04127 DNA / pantothenate metabolism flavoprotein LKW29_16210 PF02441 Flavoprotein LKW29_16215 PF01192 RNA polymerase Rpb6 LKW29_16220 PF00625 Guanylate kinase LKW29_16225 PF04025 Domain of unknown function (DUF370) LKW29_16230 PF03755 YicC-like family, N-terminal region LKW29_16230 PF08340 Domain of unknown function (DUF1732) LKW29_16235 PF00689 Cation transporting ATPase, C-terminus LKW29_16235 PF00690 Cation transporter/ATPase, N-terminus LKW29_16240 PF05670 NFACT protein RNA binding domain LKW29_16275 PF00156 Phosphoribosyl transferase domain LKW29_16280 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LKW29_16285 PF01180 Dihydroorotate dehydrogenase LKW29_16290 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LKW29_16290 PF00175 Oxidoreductase NAD-binding domain LKW29_16295 PF02142 MGS-like domain LKW29_16295 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LKW29_16295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LKW29_16300 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LKW29_16300 PF00117 Glutamine amidotransferase class-I LKW29_16305 PF01979 Amidohydrolase family LKW29_16310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LKW29_16310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LKW29_16315 PF00860 Permease family LKW29_16320 PF00156 Phosphoribosyl transferase domain LKW29_16325 PF00849 RNA pseudouridylate synthase LKW29_16325 PF01479 S4 domain LKW29_16330 PF01252 Signal peptidase (SPase) II LKW29_16340 PF00133 tRNA synthetases class I (I, L, M and V) LKW29_16340 PF08264 Anticodon-binding domain of tRNA LKW29_16340 PF06827 Zinc finger found in FPG and IleRS LKW29_16345 PF05103 DivIVA protein LKW29_16350 PF17774 Putative RNA-binding domain in YlmH LKW29_16350 PF01479 S4 domain LKW29_16355 PF02325 YGGT family LKW29_16360 PF04472 Cell division protein SepF LKW29_16365 PF01168 Alanine racemase, N-terminal domain LKW29_16370 PF02578 Multi-copper polyphenol oxidoreductase laccase LKW29_16375 PF05239 PRC-barrel domain LKW29_16380 PF04542 Sigma-70 region 2 LKW29_16380 PF04539 Sigma-70 region 3 LKW29_16380 PF04545 Sigma-70, region 4 LKW29_16385 PF04542 Sigma-70 region 2 LKW29_16385 PF04545 Sigma-70, region 4 LKW29_16390 PF03419 Sporulation factor SpoIIGA LKW29_16395 PF12327 FtsZ family, C-terminal domain LKW29_16395 PF00091 Tubulin/FtsZ family, GTPase domain LKW29_16400 PF02491 SHS2 domain inserted in FTSA LKW29_16405 PF08478 POTRA domain, FtsQ-type LKW29_16405 PF03799 Cell division protein FtsQ LKW29_16410 PF01565 FAD binding domain LKW29_16410 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LKW29_16415 PF03033 Glycosyltransferase family 28 N-terminal domain LKW29_16415 PF04101 Glycosyltransferase family 28 C-terminal domain LKW29_16420 PF01098 Cell cycle protein LKW29_16425 PF08245 Mur ligase middle domain LKW29_16425 PF02875 Mur ligase family, glutamate ligase domain LKW29_16430 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LKW29_16430 PF00953 Glycosyl transferase family 4 LKW29_16435 PF02875 Mur ligase family, glutamate ligase domain LKW29_16435 PF08245 Mur ligase middle domain LKW29_16435 PF01225 Mur ligase family, catalytic domain LKW29_16440 PF03793 PASTA domain LKW29_16440 PF03717 Penicillin-binding Protein dimerisation domain LKW29_16440 PF00905 Penicillin binding protein transpeptidase domain LKW29_16445 PF03717 Penicillin-binding Protein dimerisation domain LKW29_16445 PF03793 PASTA domain LKW29_16445 PF00905 Penicillin binding protein transpeptidase domain LKW29_16450 PF04977 Septum formation initiator LKW29_16455 PF01795 MraW methylase family LKW29_16460 PF10079 Bacillithiol biosynthesis BshC LKW29_16465 PF08546 Ketopantoate reductase PanE/ApbA C terminal LKW29_16465 PF02558 Ketopantoate reductase PanE/ApbA LKW29_16470 PF00583 Acetyltransferase (GNAT) family LKW29_16480 PF01783 Ribosomal L32p protein family LKW29_16485 PF02620 Large ribosomal RNA subunit accumulation protein YceD LKW29_16530 PF01510 N-acetylmuramoyl-L-alanine amidase LKW29_16530 PF12123 N-acetylmuramoyl-l-alanine amidase LKW29_16535 PF05105 Bacteriophage holin family LKW29_16615 PF00574 Clp protease LKW29_16625 PF03354 Phage Terminase LKW29_16645 PF10137 Predicted nucleotide-binding protein containing TIR-like domain LKW29_16650 PF00589 Phage integrase family LKW29_16715 PF00692 dUTPase LKW29_16730 PF04545 Sigma-70, region 4 LKW29_16730 PF04542 Sigma-70 region 2 LKW29_16730 PF04539 Sigma-70 region 3 LKW29_16755 PF07319 Primosomal protein DnaI N-terminus LKW29_16755 PF01695 IstB-like ATP binding protein LKW29_16780 PF01381 Helix-turn-helix LKW29_16795 PF01381 Helix-turn-helix LKW29_16810 PF14659 Phage integrase, N-terminal SAM-like domain LKW29_16810 PF00589 Phage integrase family LKW29_16815 PF05636 HIGH Nucleotidyl Transferase LKW29_16820 PF05362 Lon protease (S16) C-terminal proteolytic domain LKW29_16820 PF13180 PDZ domain LKW29_16825 PF01734 Patatin-like phospholipase LKW29_16830 PF07670 Nucleoside recognition LKW29_16835 PF01467 Cytidylyltransferase-like LKW29_16850 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LKW29_16855 PF06133 Control of competence regulator ComK, YlbF/YmcA LKW29_16860 PF00300 Histidine phosphatase superfamily (branch 1) LKW29_16865 PF14003 YlbE-like protein LKW29_16870 PF14071 Putative coat protein LKW29_16875 PF00188 Cysteine-rich secretory protein family LKW29_16875 PF14504 CAP-associated N-terminal LKW29_16880 PF08868 YugN-like family LKW29_16885 PF00795 Carbon-nitrogen hydrolase LKW29_16890 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LKW29_16895 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LKW29_16900 PF00510 Cytochrome c oxidase subunit III LKW29_16905 PF00115 Cytochrome C and Quinol oxidase polypeptide I LKW29_16910 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LKW29_16910 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LKW29_16910 PF00034 Cytochrome c LKW29_16915 PF01040 UbiA prenyltransferase family LKW29_16920 PF02628 Cytochrome oxidase assembly protein LKW29_16925 PF02785 Biotin carboxylase C-terminal domain LKW29_16925 PF00289 Biotin carboxylase, N-terminal domain LKW29_16925 PF00364 Biotin-requiring enzyme LKW29_16925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LKW29_16925 PF00682 HMGL-like LKW29_16925 PF02436 Conserved carboxylase domain LKW29_16930 PF01098 Cell cycle protein LKW29_16935 PF07408 Protein of unknown function (DUF1507) LKW29_16945 PF02562 PhoH-like protein LKW29_16945 PF13638 PIN domain LKW29_16955 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) LKW29_16965 PF14036 YlaH-like protein LKW29_16970 PF00679 Elongation factor G C-terminus LKW29_16970 PF14492 Elongation Factor G, domain II LKW29_16970 PF00009 Elongation factor Tu GTP binding domain LKW29_16970 PF03144 Elongation factor Tu domain 2 LKW29_16980 PF00459 Inositol monophosphatase family LKW29_16990 PF06335 Protein of unknown function (DUF1054) LKW29_16995 PF05256 Uncharacterised protein family (UPF0223) LKW29_17000 PF01276 Orn/Lys/Arg decarboxylase, major domain LKW29_17000 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LKW29_17040 PF07992 Pyridine nucleotide-disulphide oxidoreductase LKW29_17040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LKW29_17045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LKW29_17045 PF00364 Biotin-requiring enzyme LKW29_17045 PF02817 e3 binding domain LKW29_17050 PF02779 Transketolase, pyrimidine binding domain LKW29_17050 PF02780 Transketolase, C-terminal domain LKW29_17055 PF00676 Dehydrogenase E1 component LKW29_17065 PF01327 Polypeptide deformylase LKW29_17075 PF07288 Protein of unknown function (DUF1447) LKW29_17080 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LKW29_17080 PF17770 Ribonuclease J C-terminal domain LKW29_17080 PF00753 Metallo-beta-lactamase superfamily LKW29_17085 PF02080 TrkA-C domain LKW29_17085 PF02254 TrkA-N domain LKW29_17095 PF07687 Peptidase dimerisation domain LKW29_17095 PF01546 Peptidase family M20/M25/M40 LKW29_17100 PF00132 Bacterial transferase hexapeptide (six repeats) LKW29_17100 PF14602 Hexapeptide repeat of succinyl-transferase LKW29_17100 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LKW29_17105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LKW29_17105 PF03466 LysR substrate binding domain LKW29_17120 PF04308 Ribonuclease H-like LKW29_17130 PF08796 Protein of unknown function (DUF1797) LKW29_17145 PF10388 EAL-domain associated signalling protein domain LKW29_17145 PF00563 EAL domain LKW29_17155 PF00149 Calcineurin-like phosphoesterase LKW29_17155 PF10518 TAT (twin-arginine translocation) pathway signal sequence LKW29_17170 PF02541 Ppx/GppA phosphatase family LKW29_17175 PF14177 YkyB-like protein LKW29_17200 PF07690 Major Facilitator Superfamily LKW29_17210 PF08267 Cobalamin-independent synthase, N-terminal domain LKW29_17210 PF01717 Cobalamin-independent synthase, Catalytic domain LKW29_17220 PF14040 Deoxyribonuclease NucA/NucB LKW29_17230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_17230 PF00512 His Kinase A (phospho-acceptor) domain LKW29_17240 PF00155 Aminotransferase class I and II LKW29_17245 PF00356 Bacterial regulatory proteins, lacI family LKW29_17245 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LKW29_17250 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_17255 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_17260 PF13416 Bacterial extracellular solute-binding protein LKW29_17265 PF02903 Alpha amylase, N-terminal ig-like domain LKW29_17265 PF00128 Alpha amylase, catalytic domain LKW29_17265 PF16657 Maltogenic Amylase, C-terminal domain LKW29_17270 PF00128 Alpha amylase, catalytic domain LKW29_17270 PF16657 Maltogenic Amylase, C-terminal domain LKW29_17275 PF00005 ABC transporter LKW29_17275 PF17912 MalK OB fold domain LKW29_17275 PF03459 TOBE domain LKW29_17315 PF00108 Thiolase, N-terminal domain LKW29_17315 PF02803 Thiolase, C-terminal domain LKW29_17320 PF00293 NUDIX domain LKW29_17350 PF03551 Transcriptional regulator PadR-like family LKW29_17365 PF01008 Initiation factor 2 subunit family LKW29_17375 PF00795 Carbon-nitrogen hydrolase LKW29_17380 PF00155 Aminotransferase class I and II LKW29_17385 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LKW29_17385 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LKW29_17395 PF00596 Class II Aldolase and Adducin N-terminal domain LKW29_17400 PF03079 ARD/ARD' family LKW29_17420 PF08448 PAS fold LKW29_17420 PF00990 Diguanylate cyclase, GGDEF domain LKW29_17425 PF00881 Nitroreductase family LKW29_17440 PF00391 PEP-utilising enzyme, mobile domain LKW29_17440 PF02896 PEP-utilising enzyme, TIM barrel domain LKW29_17440 PF05524 PEP-utilising enzyme, N-terminal LKW29_17445 PF00381 PTS HPr component phosphorylation site LKW29_17450 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LKW29_17450 PF00367 phosphotransferase system, EIIB LKW29_17450 PF02378 Phosphotransferase system, EIIC LKW29_17455 PF03123 CAT RNA binding domain LKW29_17455 PF00874 PRD domain LKW29_17465 PF07702 UTRA domain LKW29_17465 PF00392 Bacterial regulatory proteins, gntR family LKW29_17470 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LKW29_17475 PF01979 Amidohydrolase family LKW29_17485 PF04079 Segregation and condensation complex subunit ScpB LKW29_17490 PF02616 Segregation and condensation protein ScpA LKW29_17500 PF03745 Domain of unknown function (DUF309) LKW29_17505 PF00583 Acetyltransferase (GNAT) family LKW29_17515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LKW29_17520 PF06207 Protein of unknown function (DUF1002) LKW29_17530 PF03323 Bacillus/Clostridium GerA spore germination protein LKW29_17535 PF14097 Stage V sporulation protein AE1 LKW29_17540 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LKW29_17545 PF07451 Stage V sporulation protein AD (SpoVAD) LKW29_17550 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LKW29_17555 PF13782 Stage V sporulation protein AB LKW29_17560 PF12164 Stage V sporulation protein AA LKW29_17570 PF00209 Sodium:neurotransmitter symporter family LKW29_17575 PF04542 Sigma-70 region 2 LKW29_17575 PF04539 Sigma-70 region 3 LKW29_17575 PF04545 Sigma-70, region 4 LKW29_17580 PF13581 Histidine kinase-like ATPase domain LKW29_17585 PF01740 STAS domain LKW29_17590 PF07943 Penicillin-binding protein 5, C-terminal domain LKW29_17590 PF00768 D-alanyl-D-alanine carboxypeptidase LKW29_17595 PF00392 Bacterial regulatory proteins, gntR family LKW29_17600 PF00005 ABC transporter LKW29_17615 PF01047 MarR family LKW29_17625 PF00860 Permease family LKW29_17630 PF01544 CorA-like Mg2+ transporter protein LKW29_17635 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LKW29_17635 PF00591 Glycosyl transferase family, a/b domain LKW29_17635 PF02885 Glycosyl transferase family, helical bundle domain LKW29_17640 PF01048 Phosphorylase superfamily LKW29_17645 PF01676 Metalloenzyme superfamily LKW29_17660 PF14004 Protein of unknown function (DUF4227) LKW29_17665 PF01475 Ferric uptake regulator family LKW29_17670 PF01944 Stage II sporulation protein M LKW29_17680 PF00293 NUDIX domain LKW29_17685 PF13072 Mother cell inhibitor of FtsZ LKW29_17690 PF00248 Aldo/keto reductase family LKW29_17695 PF00248 Aldo/keto reductase family LKW29_17700 PF13673 Acetyltransferase (GNAT) domain LKW29_17700 PF04229 GrpB protein LKW29_17710 PF00149 Calcineurin-like phosphoesterase LKW29_17710 PF00565 Staphylococcal nuclease homologue LKW29_17710 PF00746 LPXTG cell wall anchor motif LKW29_17710 PF02872 5'-nucleotidase, C-terminal domain LKW29_17720 PF12146 Serine aminopeptidase, S33 LKW29_17725 PF13726 Na+-H+ antiporter family LKW29_17725 PF03553 Na+/H+ antiporter family LKW29_17730 PF00356 Bacterial regulatory proteins, lacI family LKW29_17735 PF00583 Acetyltransferase (GNAT) family LKW29_17740 PF12146 Serine aminopeptidase, S33 LKW29_17745 PF10827 Protein of unknown function (DUF2552) LKW29_17755 PF01872 RibD C-terminal domain LKW29_17755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LKW29_17760 PF00677 Lumazine binding domain LKW29_17765 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LKW29_17765 PF00925 GTP cyclohydrolase II LKW29_17770 PF00885 6,7-dimethyl-8-ribityllumazine synthase LKW29_17780 PF06968 Biotin and Thiamin Synthesis associated domain LKW29_17780 PF04055 Radical SAM superfamily LKW29_17785 PF13847 Methyltransferase domain LKW29_17790 PF08241 Methyltransferase domain LKW29_17790 PF12697 Alpha/beta hydrolase family LKW29_17795 PF00155 Aminotransferase class I and II LKW29_17805 PF00202 Aminotransferase class-III LKW29_17815 PF03553 Na+/H+ antiporter family LKW29_17820 PF02872 5'-nucleotidase, C-terminal domain LKW29_17820 PF00149 Calcineurin-like phosphoesterase LKW29_17830 PF01037 Lrp/AsnC ligand binding domain LKW29_17830 PF13404 AsnC-type helix-turn-helix domain LKW29_17845 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LKW29_17845 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LKW29_17850 PF00202 Aminotransferase class-III LKW29_17855 PF00696 Amino acid kinase family LKW29_17860 PF01960 ArgJ family LKW29_17865 PF01118 Semialdehyde dehydrogenase, NAD binding domain LKW29_17865 PF02774 Semialdehyde dehydrogenase, dimerisation domain LKW29_17875 PF00106 short chain dehydrogenase LKW29_17880 PF00753 Metallo-beta-lactamase superfamily LKW29_17885 PF03807 NADP oxidoreductase coenzyme F420-dependent LKW29_17885 PF14748 Pyrroline-5-carboxylate reductase dimerisation LKW29_17890 PF03313 Serine dehydratase alpha chain LKW29_17895 PF03315 Serine dehydratase beta chain LKW29_17895 PF01842 ACT domain LKW29_17905 PF00753 Metallo-beta-lactamase superfamily LKW29_17905 PF12706 Beta-lactamase superfamily domain LKW29_17915 PF00817 impB/mucB/samB family LKW29_17915 PF11799 impB/mucB/samB family C-terminal domain LKW29_17915 PF11798 IMS family HHH motif LKW29_17925 PF07687 Peptidase dimerisation domain LKW29_17925 PF01546 Peptidase family M20/M25/M40 LKW29_17930 PF13302 Acetyltransferase (GNAT) domain LKW29_17945 PF03734 L,D-transpeptidase catalytic domain LKW29_17950 PF06081 Aromatic acid exporter family member 1 LKW29_17950 PF11728 Putative aromatic acid exporter C-terminal domain LKW29_17955 PF00005 ABC transporter LKW29_17960 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_17965 PF00497 Bacterial extracellular solute-binding proteins, family 3 LKW29_17970 PF06491 Disulphide isomerase LKW29_17975 PF11208 Protein of unknown function (DUF2992) LKW29_17980 PF00293 NUDIX domain LKW29_17980 PF09297 NADH pyrophosphatase zinc ribbon domain LKW29_17985 PF01098 Cell cycle protein LKW29_17990 PF02817 e3 binding domain LKW29_17990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LKW29_17990 PF00364 Biotin-requiring enzyme LKW29_17995 PF02779 Transketolase, pyrimidine binding domain LKW29_17995 PF02780 Transketolase, C-terminal domain LKW29_18000 PF00676 Dehydrogenase E1 component LKW29_18005 PF07992 Pyridine nucleotide-disulphide oxidoreductase LKW29_18005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LKW29_18010 PF00871 Acetokinase family LKW29_18015 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LKW29_18015 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LKW29_18020 PF01515 Phosphate acetyl/butaryl transferase LKW29_18025 PF02954 Bacterial regulatory protein, Fis family LKW29_18025 PF00989 PAS fold LKW29_18025 PF00158 Sigma-54 interaction domain LKW29_18035 PF03009 Glycerophosphoryl diester phosphodiesterase family LKW29_18040 PF14174 YycC-like protein LKW29_18050 PF08769 Sporulation initiation factor Spo0A C terminal LKW29_18050 PF00072 Response regulator receiver domain LKW29_18055 PF17820 PDZ domain LKW29_18055 PF05580 SpoIVB peptidase S55 LKW29_18060 PF13476 AAA domain LKW29_18065 PF01316 Arginine repressor, DNA binding domain LKW29_18065 PF02863 Arginine repressor, C-terminal domain LKW29_18070 PF01728 FtsJ-like methyltransferase LKW29_18070 PF01479 S4 domain LKW29_18075 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LKW29_18075 PF02779 Transketolase, pyrimidine binding domain LKW29_18075 PF02780 Transketolase, C-terminal domain LKW29_18080 PF00348 Polyprenyl synthetase LKW29_18085 PF02609 Exonuclease VII small subunit LKW29_18090 PF13742 OB-fold nucleic acid binding domain LKW29_18090 PF02601 Exonuclease VII, large subunit LKW29_18095 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LKW29_18095 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LKW29_18100 PF01029 NusB family LKW29_18105 PF03780 Asp23 family, cell envelope-related function LKW29_18110 PF02785 Biotin carboxylase C-terminal domain LKW29_18110 PF00289 Biotin carboxylase, N-terminal domain LKW29_18110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LKW29_18115 PF00364 Biotin-requiring enzyme LKW29_18125 PF12685 SpoIIIAH-like protein LKW29_18135 PF09581 Stage III sporulation protein AF (Spore_III_AF) LKW29_18140 PF09546 Stage III sporulation protein AE (spore_III_AE) LKW29_18145 PF06686 Stage III sporulation protein AC/AD protein family LKW29_18150 PF06686 Stage III sporulation protein AC/AD protein family LKW29_18155 PF09548 Stage III sporulation protein AB (spore_III_AB) LKW29_18180 PF08207 Elongation factor P (EF-P) KOW-like domain LKW29_18180 PF09285 Elongation factor P, C-terminal LKW29_18180 PF01132 Elongation factor P (EF-P) OB domain LKW29_18185 PF00557 Metallopeptidase family M24 LKW29_18185 PF01321 Creatinase/Prolidase N-terminal domain LKW29_18190 PF01220 Dehydroquinase class II LKW29_18195 PF11085 Conserved membrane protein YqhR LKW29_18200 PF07136 Protein of unknown function (DUF1385) LKW29_18210 PF13419 Haloacid dehalogenase-like hydrolase LKW29_18215 PF01325 Iron dependent repressor, N-terminal DNA binding domain LKW29_18215 PF02742 Iron dependent repressor, metal binding and dimerisation domain LKW29_18230 PF03099 Biotin/lipoate A/B protein ligase family LKW29_18235 PF00581 Rhodanese-like domain LKW29_18240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LKW29_18240 PF00356 Bacterial regulatory proteins, lacI family LKW29_18250 PF00893 Small Multidrug Resistance protein LKW29_18255 PF00893 Small Multidrug Resistance protein LKW29_18290 PF00005 ABC transporter LKW29_18295 PF00392 Bacterial regulatory proteins, gntR family LKW29_18310 PF02347 Glycine cleavage system P-protein LKW29_18315 PF02347 Glycine cleavage system P-protein LKW29_18320 PF08669 Glycine cleavage T-protein C-terminal barrel domain LKW29_18320 PF01571 Aminomethyltransferase folate-binding domain LKW29_18325 PF00176 SNF2 family N-terminal domain LKW29_18325 PF00271 Helicase conserved C-terminal domain LKW29_18330 PF11079 Bacterial protein YqhG of unknown function LKW29_18350 PF14038 YqzE-like protein LKW29_18355 PF01202 Shikimate kinase LKW29_18380 PF07963 Prokaryotic N-terminal methylation motif LKW29_18390 PF00482 Type II secretion system (T2SS), protein F LKW29_18395 PF00437 Type II/IV secretion system protein LKW29_18405 PF11117 Protein of unknown function (DUF2626) LKW29_18410 PF00375 Sodium:dicarboxylate symporter family LKW29_18445 PF03033 Glycosyltransferase family 28 N-terminal domain LKW29_18445 PF04101 Glycosyltransferase family 28 C-terminal domain LKW29_18455 PF02219 Methylenetetrahydrofolate reductase LKW29_18455 PF02574 Homocysteine S-methyltransferase LKW29_18460 PF01053 Cys/Met metabolism PLP-dependent enzyme LKW29_18465 PF01053 Cys/Met metabolism PLP-dependent enzyme LKW29_18475 PF01022 Bacterial regulatory protein, arsR family LKW29_18485 PF00753 Metallo-beta-lactamase superfamily LKW29_18490 PF10958 Protein of unknown function (DUF2759) LKW29_18495 PF00480 ROK family LKW29_18500 PF06014 Bacterial protein of unknown function (DUF910) LKW29_18505 PF01812 5-formyltetrahydrofolate cyclo-ligase family LKW29_18510 PF00471 Ribosomal protein L33 LKW29_18515 PF00483 Nucleotidyl transferase LKW29_18520 PF01895 PhoU domain LKW29_18525 PF00005 ABC transporter LKW29_18530 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_18535 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_18540 PF12849 PBP superfamily domain LKW29_18545 PF00905 Penicillin binding protein transpeptidase domain LKW29_18545 PF03717 Penicillin-binding Protein dimerisation domain LKW29_18550 PF07690 Major Facilitator Superfamily LKW29_18555 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LKW29_18555 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LKW29_18575 PF04551 GcpE protein LKW29_18580 PF01475 Ferric uptake regulator family LKW29_18585 PF00950 ABC 3 transport family LKW29_18590 PF00005 ABC transporter LKW29_18595 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LKW29_18595 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LKW29_18600 PF11116 Protein of unknown function (DUF2624) LKW29_18605 PF01261 Xylose isomerase-like TIM barrel LKW29_18610 PF00271 Helicase conserved C-terminal domain LKW29_18610 PF00270 DEAD/DEAH box helicase LKW29_18620 PF02401 LytB protein LKW29_18625 PF01784 NIF3 (NGG1p interacting factor 3) LKW29_18630 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LKW29_18635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LKW29_18640 PF04542 Sigma-70 region 2 LKW29_18640 PF04545 Sigma-70, region 4 LKW29_18640 PF04539 Sigma-70 region 3 LKW29_18640 PF03979 Sigma-70 factor, region 1.1 LKW29_18640 PF00140 Sigma-70 factor, region 1.2 LKW29_18645 PF01807 CHC2 zinc finger LKW29_18645 PF10410 DnaB-helicase binding domain of primase LKW29_18645 PF08275 DNA primase catalytic core, N-terminal domain LKW29_18650 PF03618 Kinase/pyrophosphorylase LKW29_18655 PF00571 CBS domain LKW29_18655 PF08279 HTH domain LKW29_18660 PF02565 Recombination protein O C terminal LKW29_18660 PF11967 Recombination protein O N terminal LKW29_18670 PF07650 KH domain LKW29_18670 PF01926 50S ribosome-binding GTPase LKW29_18675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LKW29_18680 PF01219 Prokaryotic diacylglycerol kinase LKW29_18685 PF02130 Uncharacterized protein family UPF0054 LKW29_18690 PF07698 7TM receptor with intracellular HD hydrolase LKW29_18690 PF07697 7TM-HD extracellular LKW29_18690 PF01966 HD domain LKW29_18695 PF02562 PhoH-like protein LKW29_18700 PF06898 Putative stage IV sporulation protein YqfD LKW29_18705 PF07873 YabP family LKW29_18710 PF09424 Yqey-like protein LKW29_18715 PF01165 Ribosomal protein S21 LKW29_18720 PF00919 Uncharacterized protein family UPF0004 LKW29_18720 PF01938 TRAM domain LKW29_18720 PF04055 Radical SAM superfamily LKW29_18725 PF04452 RNA methyltransferase LKW29_18735 PF00226 DnaJ domain LKW29_18735 PF01556 DnaJ C terminal domain LKW29_18735 PF00684 DnaJ central domain LKW29_18740 PF00012 Hsp70 protein LKW29_18745 PF01025 GrpE LKW29_18750 PF01628 HrcA protein C terminal domain LKW29_18760 PF01638 HxlR-like helix-turn-helix LKW29_18765 PF06421 GTP-binding protein LepA C-terminus LKW29_18765 PF00009 Elongation factor Tu GTP binding domain LKW29_18765 PF00679 Elongation factor G C-terminus LKW29_18765 PF03144 Elongation factor Tu domain 2 LKW29_18775 PF03418 Germination protease LKW29_18780 PF01649 Ribosomal protein S20 LKW29_18785 PF06144 DNA polymerase III, delta subunit LKW29_18790 PF14141 YqzM-like protein LKW29_18795 PF03772 Competence protein LKW29_18795 PF00753 Metallo-beta-lactamase superfamily LKW29_18795 PF13567 Domain of unknown function (DUF4131) LKW29_18800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LKW29_18805 PF10531 SLBB domain LKW29_18810 PF03807 NADP oxidoreductase coenzyme F420-dependent LKW29_18810 PF14748 Pyrroline-5-carboxylate reductase dimerisation LKW29_18815 PF13649 Methyltransferase domain LKW29_18825 PF01966 HD domain LKW29_18830 PF01467 Cytidylyltransferase-like LKW29_18835 PF01985 CRS1 / YhbY (CRM) domain LKW29_18840 PF08501 Shikimate dehydrogenase substrate binding domain LKW29_18840 PF01488 Shikimate / quinate 5-dehydrogenase LKW29_18840 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LKW29_18845 PF01926 50S ribosome-binding GTPase LKW29_18860 PF02666 Phosphatidylserine decarboxylase LKW29_18865 PF04545 Sigma-70, region 4 LKW29_18865 PF04542 Sigma-70 region 2 LKW29_18875 PF16244 Domain of unknown function (DUF4901) LKW29_18880 PF00471 Ribosomal protein L33 LKW29_18885 PF00881 Nitroreductase family LKW29_18890 PF04607 Region found in RelA / SpoT proteins LKW29_18900 PF00245 Alkaline phosphatase LKW29_18910 PF00561 alpha/beta hydrolase fold LKW29_18910 PF08386 TAP-like protein LKW29_18945 PF13860 FlgD Ig-like domain LKW29_18945 PF05922 Peptidase inhibitor I9 LKW29_18945 PF02225 PA domain LKW29_18945 PF00082 Subtilase family LKW29_18950 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LKW29_18960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LKW29_18965 PF07681 DoxX LKW29_18995 PF00005 ABC transporter LKW29_19000 PF01032 FecCD transport family LKW29_19005 PF01497 Periplasmic binding protein LKW29_19010 PF14143 YrhC-like protein LKW29_19015 PF00171 Aldehyde dehydrogenase family LKW29_19015 PF00465 Iron-containing alcohol dehydrogenase LKW29_19020 PF01053 Cys/Met metabolism PLP-dependent enzyme LKW29_19025 PF00291 Pyridoxal-phosphate dependent enzyme LKW29_19030 PF01048 Phosphorylase superfamily LKW29_19035 PF08241 Methyltransferase domain LKW29_19050 PF03717 Penicillin-binding Protein dimerisation domain LKW29_19050 PF00905 Penicillin binding protein transpeptidase domain LKW29_19055 PF01272 Transcription elongation factor, GreA/GreB, C-term LKW29_19055 PF03449 Transcription elongation factor, N-terminal LKW29_19060 PF00485 Phosphoribulokinase / Uridine kinase family LKW29_19065 PF01136 Peptidase family U32 LKW29_19065 PF16325 Peptidase family U32 C-terminal domain LKW29_19070 PF01136 Peptidase family U32 LKW29_19075 PF01596 O-methyltransferase LKW29_19080 PF02618 YceG-like family LKW29_19085 PF06949 Protein of unknown function (DUF1292) LKW29_19090 PF03652 Holliday junction resolvase LKW29_19095 PF06135 IreB regulatory phosphoprotein LKW29_19100 PF02272 DHHA1 domain LKW29_19100 PF01411 tRNA synthetases class II (A) LKW29_19100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LKW29_19110 PF01594 AI-2E family transporter LKW29_19145 PF00266 Aminotransferase class-V LKW29_19150 PF02082 Transcriptional regulator LKW29_19155 PF05496 Holliday junction DNA helicase RuvB P-loop domain LKW29_19155 PF12002 MgsA AAA+ ATPase C terminal LKW29_19155 PF16193 AAA C-terminal domain LKW29_19165 PF00899 ThiF family LKW29_19170 PF02938 GAD domain LKW29_19170 PF00152 tRNA synthetases class II (D, K and N) LKW29_19170 PF01336 OB-fold nucleic acid binding domain LKW29_19175 PF03129 Anticodon binding domain LKW29_19175 PF13393 Histidyl-tRNA synthetase LKW29_19185 PF02580 D-Tyr-tRNA(Tyr) deacylase LKW29_19190 PF02824 TGS domain LKW29_19190 PF13291 ACT domain LKW29_19190 PF04607 Region found in RelA / SpoT proteins LKW29_19195 PF00156 Phosphoribosyl transferase domain LKW29_19200 PF01368 DHH family LKW29_19200 PF02272 DHHA1 domain LKW29_19200 PF17768 RecJ OB domain LKW29_19200 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LKW29_19205 PF16916 Dimerisation domain of Zinc Transporter LKW29_19205 PF01545 Cation efflux family LKW29_19210 PF07549 SecD/SecF GG Motif LKW29_19210 PF02355 Protein export membrane protein LKW29_19215 PF13797 Post-transcriptional regulator LKW29_19220 PF01943 Polysaccharide biosynthesis protein LKW29_19220 PF14667 Polysaccharide biosynthesis C-terminal domain LKW29_19235 PF02699 Preprotein translocase subunit LKW29_19240 PF01702 Queuine tRNA-ribosyltransferase LKW29_19245 PF02547 Queuosine biosynthesis protein LKW29_19250 PF11146 Protein of unknown function (DUF2905) LKW29_19255 PF05496 Holliday junction DNA helicase RuvB P-loop domain LKW29_19255 PF17864 RuvB AAA lid domain LKW29_19255 PF05491 RuvB C-terminal winged helix domain LKW29_19260 PF01330 RuvA N terminal domain LKW29_19260 PF07499 RuvA, C-terminal domain LKW29_19265 PF01497 Periplasmic binding protein LKW29_19275 PF00892 EamA-like transporter family LKW29_19280 PF00892 EamA-like transporter family LKW29_19285 PF01022 Bacterial regulatory protein, arsR family LKW29_19300 PF01476 LysM domain LKW29_19305 PF02445 Quinolinate synthetase A protein LKW29_19310 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LKW29_19310 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LKW29_19315 PF02910 Fumarate reductase flavoprotein C-term LKW29_19315 PF00890 FAD binding domain LKW29_19320 PF00266 Aminotransferase class-V LKW29_19325 PF02829 3H domain LKW29_19325 PF08279 HTH domain LKW29_19330 PF03475 3-alpha domain LKW29_19330 PF03473 MOSC domain LKW29_19335 PF01842 ACT domain LKW29_19335 PF00800 Prephenate dehydratase LKW29_19340 PF02687 FtsX-like permease family LKW29_19345 PF02687 FtsX-like permease family LKW29_19350 PF00005 ABC transporter LKW29_19360 PF00072 Response regulator receiver domain LKW29_19360 PF00486 Transcriptional regulatory protein, C terminal LKW29_19365 PF01926 50S ribosome-binding GTPase LKW29_19365 PF09269 Domain of unknown function (DUF1967) LKW29_19365 PF01018 GTP1/OBG LKW29_19370 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LKW29_19370 PF14682 Sporulation initiation phospho-transferase B, C-terminal LKW29_19375 PF01016 Ribosomal L27 protein LKW29_19380 PF04327 Cysteine protease Prp LKW29_19385 PF00829 Ribosomal prokaryotic L21 protein LKW29_19390 PF10150 Ribonuclease E/G family LKW29_19390 PF00575 S1 RNA binding domain LKW29_19395 PF02163 Peptidase family M50 LKW29_19400 PF01551 Peptidase family M23 LKW29_19405 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LKW29_19410 PF03775 Septum formation inhibitor MinC, C-terminal domain LKW29_19420 PF04085 rod shape-determining protein MreC LKW29_19430 PF04002 RadC-like JAB domain LKW29_19435 PF02545 Maf-like protein LKW29_19445 PF02875 Mur ligase family, glutamate ligase domain LKW29_19445 PF08245 Mur ligase middle domain LKW29_19450 PF08264 Anticodon-binding domain of tRNA LKW29_19450 PF00133 tRNA synthetases class I (I, L, M and V) LKW29_19450 PF10458 Valyl tRNA synthetase tRNA binding arm LKW29_19460 PF01476 LysM domain LKW29_19465 PF00202 Aminotransferase class-III LKW29_19470 PF00490 Delta-aminolevulinic acid dehydratase LKW29_19475 PF02602 Uroporphyrinogen-III synthase HemD LKW29_19480 PF03900 Porphobilinogen deaminase, C-terminal domain LKW29_19480 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LKW29_19485 PF01578 Cytochrome C assembly protein LKW29_19490 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LKW29_19490 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LKW29_19490 PF01488 Shikimate / quinate 5-dehydrogenase LKW29_19495 PF01047 MarR family LKW29_19500 PF02566 OsmC-like protein LKW29_19505 PF01926 50S ribosome-binding GTPase LKW29_19510 PF02190 ATP-dependent protease La (LON) substrate-binding domain LKW29_19510 PF00004 ATPase family associated with various cellular activities (AAA) LKW29_19510 PF05362 Lon protease (S16) C-terminal proteolytic domain LKW29_19515 PF00004 ATPase family associated with various cellular activities (AAA) LKW29_19515 PF05362 Lon protease (S16) C-terminal proteolytic domain LKW29_19520 PF07724 AAA domain (Cdc48 subfamily) LKW29_19520 PF10431 C-terminal, D2-small domain, of ClpB protein LKW29_19520 PF06689 ClpX C4-type zinc finger LKW29_19525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LKW29_19525 PF05698 Bacterial trigger factor protein (TF) C-terminus LKW29_19525 PF05697 Bacterial trigger factor protein (TF) LKW29_19540 PF11724 YvbH-like oligomerisation region LKW29_19540 PF08000 Bacterial PH domain LKW29_19560 PF12850 Calcineurin-like phosphoesterase superfamily domain LKW29_19565 PF01725 Ham1 family LKW29_19570 PF01138 3' exoribonuclease family, domain 1 LKW29_19570 PF03725 3' exoribonuclease family, domain 2 LKW29_19575 PF10646 Sporulation and spore germination LKW29_19580 PF01177 Asp/Glu/Hydantoin racemase LKW29_19585 PF07690 Major Facilitator Superfamily LKW29_19595 PF00440 Bacterial regulatory proteins, tetR family LKW29_19610 PF00196 Bacterial regulatory proteins, luxR family LKW29_19615 PF00860 Permease family LKW29_19625 PF07969 Amidohydrolase family LKW29_19630 PF07969 Amidohydrolase family LKW29_19635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_19640 PF12911 N-terminal TM domain of oligopeptide transport permease C LKW29_19640 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_19645 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_19650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LKW29_19650 PF00005 ABC transporter LKW29_19655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LKW29_19655 PF00005 ABC transporter LKW29_19660 PF06580 Histidine kinase LKW29_19660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_19660 PF07694 5TMR of 5TMR-LYT LKW29_19665 PF04397 LytTr DNA-binding domain LKW29_19665 PF00072 Response regulator receiver domain LKW29_19680 PF04024 PspC domain LKW29_19685 PF01381 Helix-turn-helix LKW29_19685 PF07883 Cupin domain LKW29_19690 PF13536 Putative multidrug resistance efflux transporter LKW29_19695 PF00230 Major intrinsic protein LKW29_19700 PF02082 Transcriptional regulator LKW29_19710 PF13732 Domain of unknown function (DUF4162) LKW29_19710 PF00005 ABC transporter LKW29_19715 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LKW29_19725 PF01618 MotA/TolQ/ExbB proton channel family LKW29_19730 PF02557 D-alanyl-D-alanine carboxypeptidase LKW29_19735 PF03061 Thioesterase superfamily LKW29_19740 PF13085 2Fe-2S iron-sulfur cluster binding domain LKW29_19740 PF13183 4Fe-4S dicluster domain LKW29_19745 PF00890 FAD binding domain LKW29_19745 PF02910 Fumarate reductase flavoprotein C-term LKW29_19750 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LKW29_19755 PF10702 Protein of unknown function (DUF2507) LKW29_19760 PF02151 UvrB/uvrC motif LKW29_19760 PF01541 GIY-YIG catalytic domain LKW29_19760 PF08459 UvrC Helix-hairpin-helix N-terminal LKW29_19765 PF00085 Thioredoxin LKW29_19770 PF01012 Electron transfer flavoprotein domain LKW29_19770 PF00766 Electron transfer flavoprotein FAD-binding domain LKW29_19775 PF01012 Electron transfer flavoprotein domain LKW29_19780 PF00378 Enoyl-CoA hydratase/isomerase LKW29_19785 PF08359 YsiA-like protein, C-terminal region LKW29_19785 PF00440 Bacterial regulatory proteins, tetR family LKW29_19790 PF00501 AMP-binding enzyme LKW29_19790 PF13193 AMP-binding enzyme C-terminal domain LKW29_19800 PF01497 Periplasmic binding protein LKW29_19805 PF01032 FecCD transport family LKW29_19810 PF05163 DinB family LKW29_19840 PF00005 ABC transporter LKW29_19845 PF00512 His Kinase A (phospho-acceptor) domain LKW29_19845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_19850 PF00486 Transcriptional regulatory protein, C terminal LKW29_19850 PF00072 Response regulator receiver domain LKW29_19860 PF09962 Uncharacterized conserved protein (DUF2196) LKW29_19865 PF17785 PUA-like domain LKW29_19865 PF10672 S-adenosylmethionine-dependent methyltransferase LKW29_19875 PF03992 Antibiotic biosynthesis monooxygenase LKW29_19880 PF04203 Sortase domain LKW29_19885 PF00005 ABC transporter LKW29_19890 PF01032 FecCD transport family LKW29_19895 PF01497 Periplasmic binding protein LKW29_19900 PF05031 Iron Transport-associated domain LKW29_19910 PF05031 Iron Transport-associated domain LKW29_19915 PF05525 Branched-chain amino acid transport protein LKW29_19920 PF00849 RNA pseudouridylate synthase LKW29_19920 PF01479 S4 domain LKW29_19925 PF01713 Smr domain LKW29_19925 PF00488 MutS domain V LKW29_19930 PF14791 DNA polymerase beta thumb LKW29_19930 PF14716 Helix-hairpin-helix domain LKW29_19930 PF02811 PHP domain LKW29_19935 PF02674 Colicin V production protein LKW29_19940 PF05164 Cell division protein ZapA LKW29_19945 PF11858 Domain of unknown function (DUF3378) LKW29_19945 PF01351 Ribonuclease HII LKW29_19965 PF00152 tRNA synthetases class II (D, K and N) LKW29_19965 PF01336 OB-fold nucleic acid binding domain LKW29_19970 PF03484 tRNA synthetase B5 domain LKW29_19970 PF03483 B3/4 domain LKW29_19970 PF03147 Ferredoxin-fold anticodon binding domain LKW29_19970 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LKW29_19970 PF01588 Putative tRNA binding domain LKW29_19975 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LKW29_19975 PF01409 tRNA synthetases class II core domain (F) LKW29_19980 PF00588 SpoU rRNA Methylase family LKW29_19980 PF08032 RNA 2'-O ribose methyltransferase substrate binding LKW29_19985 PF14098 Small, acid-soluble spore protein I LKW29_19990 PF01966 HD domain LKW29_20015 PF07690 Major Facilitator Superfamily LKW29_20025 PF00440 Bacterial regulatory proteins, tetR family LKW29_20025 PF16859 Tetracyclin repressor-like, C-terminal domain LKW29_20030 PF05343 M42 glutamyl aminopeptidase LKW29_20040 PF00453 Ribosomal protein L20 LKW29_20045 PF01632 Ribosomal protein L35 LKW29_20050 PF00707 Translation initiation factor IF-3, C-terminal domain LKW29_20050 PF05198 Translation initiation factor IF-3, N-terminal domain LKW29_20055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LKW29_20055 PF03129 Anticodon binding domain LKW29_20055 PF02824 TGS domain LKW29_20055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LKW29_20060 PF08812 YtxC-like family LKW29_20065 PF01695 IstB-like ATP binding protein LKW29_20065 PF07319 Primosomal protein DnaI N-terminus LKW29_20070 PF07261 Replication initiation and membrane attachment LKW29_20075 PF03477 ATP cone domain LKW29_20080 PF02675 S-adenosylmethionine decarboxylase LKW29_20085 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LKW29_20085 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LKW29_20090 PF01121 Dephospho-CoA kinase LKW29_20095 PF02659 Putative manganese efflux pump LKW29_20100 PF06827 Zinc finger found in FPG and IleRS LKW29_20100 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LKW29_20100 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LKW29_20105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LKW29_20105 PF00476 DNA polymerase family A LKW29_20105 PF01367 5'-3' exonuclease, C-terminal SAM fold LKW29_20110 PF16736 Single Cache-like LKW29_20110 PF00989 PAS fold LKW29_20110 PF00512 His Kinase A (phospho-acceptor) domain LKW29_20110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_20115 PF00486 Transcriptional regulatory protein, C terminal LKW29_20115 PF00072 Response regulator receiver domain LKW29_20130 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LKW29_20130 PF00056 lactate/malate dehydrogenase, NAD binding domain LKW29_20135 PF00180 Isocitrate/isopropylmalate dehydrogenase LKW29_20140 PF00285 Citrate synthase, C-terminal domain LKW29_20145 PF04284 Protein of unknown function (DUF441) LKW29_20150 PF01594 AI-2E family transporter LKW29_20155 PF04186 FxsA cytoplasmic membrane protein LKW29_20160 PF00391 PEP-utilising enzyme, mobile domain LKW29_20160 PF00224 Pyruvate kinase, barrel domain LKW29_20160 PF02887 Pyruvate kinase, alpha/beta domain LKW29_20165 PF00365 Phosphofructokinase LKW29_20170 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LKW29_20175 PF01039 Carboxyl transferase domain LKW29_20175 PF17848 Acetyl-coA carboxylase zinc finger domain LKW29_20180 PF00392 Bacterial regulatory proteins, gntR family LKW29_20185 PF03949 Malic enzyme, NAD binding domain LKW29_20185 PF00390 Malic enzyme, N-terminal domain LKW29_20190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LKW29_20190 PF14579 Helix-hairpin-helix motif LKW29_20190 PF02811 PHP domain LKW29_20190 PF01336 OB-fold nucleic acid binding domain LKW29_20190 PF07733 Bacterial DNA polymerase III alpha NTPase domain LKW29_20195 PF14034 Sporulation protein YtrH LKW29_20205 PF01368 DHH family LKW29_20205 PF02272 DHHA1 domain LKW29_20210 PF14007 YtpI-like protein LKW29_20225 PF07085 DRTGG domain LKW29_20225 PF00571 CBS domain LKW29_20225 PF00392 Bacterial regulatory proteins, gntR family LKW29_20225 PF03061 Thioesterase superfamily LKW29_20240 PF01321 Creatinase/Prolidase N-terminal domain LKW29_20240 PF00557 Metallopeptidase family M24 LKW29_20245 PF11518 Protein of unknown function (DUF3221) LKW29_20280 PF12746 GNAT acetyltransferase LKW29_20285 PF07883 Cupin domain LKW29_20295 PF01381 Helix-turn-helix LKW29_20305 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LKW29_20305 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LKW29_20315 PF00582 Universal stress protein family LKW29_20335 PF00206 Lyase LKW29_20335 PF14698 Argininosuccinate lyase C-terminal LKW29_20340 PF00764 Arginosuccinate synthase LKW29_20355 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LKW29_20355 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LKW29_20360 PF12787 EcsC protein family LKW29_20375 PF00871 Acetokinase family LKW29_20380 PF02384 N-6 DNA Methylase LKW29_20385 PF08534 Redoxin LKW29_20390 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LKW29_20400 PF01513 ATP-NAD kinase LKW29_20405 PF07969 Amidohydrolase family LKW29_20415 PF00501 AMP-binding enzyme LKW29_20415 PF13193 AMP-binding enzyme C-terminal domain LKW29_20420 PF00269 Small, acid-soluble spore proteins, alpha/beta type LKW29_20425 PF02568 Thiamine biosynthesis protein (ThiI) LKW29_20425 PF02926 THUMP domain LKW29_20430 PF00266 Aminotransferase class-V LKW29_20435 PF06160 Septation ring formation regulator, EzrA LKW29_20440 PF03466 LysR substrate binding domain LKW29_20440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LKW29_20445 PF00892 EamA-like transporter family LKW29_20455 PF13185 GAF domain LKW29_20460 PF01053 Cys/Met metabolism PLP-dependent enzyme LKW29_20465 PF00163 Ribosomal protein S4/S9 N-terminal domain LKW29_20465 PF01479 S4 domain LKW29_20480 PF01479 S4 domain LKW29_20480 PF00579 tRNA synthetases class I (W and Y) LKW29_20490 PF08281 Sigma-70, region 4 LKW29_20490 PF04542 Sigma-70 region 2 LKW29_20500 PF00501 AMP-binding enzyme LKW29_20500 PF13193 AMP-binding enzyme C-terminal domain LKW29_20505 PF00583 Acetyltransferase (GNAT) family LKW29_20510 PF00571 CBS domain LKW29_20515 PF00850 Histone deacetylase domain LKW29_20525 PF00072 Response regulator receiver domain LKW29_20525 PF00486 Transcriptional regulatory protein, C terminal LKW29_20530 PF00672 HAMP domain LKW29_20530 PF13426 PAS domain LKW29_20530 PF00512 His Kinase A (phospho-acceptor) domain LKW29_20530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_20535 PF12796 Ankyrin repeats (3 copies) LKW29_20540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LKW29_20545 PF01741 Large-conductance mechanosensitive channel, MscL LKW29_20570 PF00356 Bacterial regulatory proteins, lacI family LKW29_20575 PF07537 CamS sex pheromone cAM373 precursor LKW29_20580 PF11009 Protein of unknown function (DUF2847) LKW29_20590 PF02073 Thermophilic metalloprotease (M29) LKW29_20615 PF01225 Mur ligase family, catalytic domain LKW29_20615 PF02875 Mur ligase family, glutamate ligase domain LKW29_20615 PF08245 Mur ligase middle domain LKW29_20625 PF01580 FtsK/SpoIIIE family LKW29_20625 PF09397 Ftsk gamma domain LKW29_20625 PF17854 FtsK alpha domain LKW29_20635 PF14794 Domain of unknown function (DUF4479) LKW29_20635 PF01588 Putative tRNA binding domain LKW29_20640 PF07285 Protein of unknown function (DUF1444) LKW29_20645 PF00085 Thioredoxin LKW29_20650 PF01931 Protein of unknown function DUF84 LKW29_20655 PF05343 M42 glutamyl aminopeptidase LKW29_20665 PF00753 Metallo-beta-lactamase superfamily LKW29_20670 PF02390 Putative methyltransferase LKW29_20675 PF14165 YtzH-like protein LKW29_20680 PF01636 Phosphotransferase enzyme family LKW29_20685 PF00128 Alpha amylase, catalytic domain LKW29_20685 PF17999 Pullulanase N1-terminal domain LKW29_20685 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LKW29_20690 PF02834 LigT like Phosphoesterase LKW29_20695 PF01546 Peptidase family M20/M25/M40 LKW29_20700 PF08220 DeoR-like helix-turn-helix domain LKW29_20705 PF00849 RNA pseudouridylate synthase LKW29_20705 PF01479 S4 domain LKW29_20710 PF14667 Polysaccharide biosynthesis C-terminal domain LKW29_20710 PF01943 Polysaccharide biosynthesis protein LKW29_20720 PF07690 Major Facilitator Superfamily LKW29_20725 PF01022 Bacterial regulatory protein, arsR family LKW29_20730 PF08327 Activator of Hsp90 ATPase homolog 1-like protein LKW29_20740 PF10957 Sporulation protein Cse60 LKW29_20760 PF06800 Sugar transport protein LKW29_20775 PF02391 MoaE protein LKW29_20780 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LKW29_20785 PF03453 MoeA N-terminal region (domain I and II) LKW29_20785 PF03454 MoeA C-terminal region (domain IV) LKW29_20785 PF00994 Probable molybdopterin binding domain LKW29_20790 PF01967 MoaC family LKW29_20795 PF00899 ThiF family LKW29_20800 PF06463 Molybdenum Cofactor Synthesis C LKW29_20800 PF04055 Radical SAM superfamily LKW29_20825 PF00581 Rhodanese-like domain LKW29_20835 PF00561 alpha/beta hydrolase fold LKW29_20840 PF03323 Bacillus/Clostridium GerA spore germination protein LKW29_20845 PF03845 Spore germination protein LKW29_20875 PF09334 tRNA synthetases class I (M) LKW29_20875 PF13603 Leucyl-tRNA synthetase, Domain 2 LKW29_20875 PF00133 tRNA synthetases class I (I, L, M and V) LKW29_20875 PF08264 Anticodon-binding domain of tRNA LKW29_20880 PF07690 Major Facilitator Superfamily LKW29_20885 PF00999 Sodium/hydrogen exchanger family LKW29_20890 PF02080 TrkA-C domain LKW29_20905 PF00005 ABC transporter LKW29_20910 PF04235 Protein of unknown function (DUF418) LKW29_20910 PF07786 Protein of unknown function (DUF1624) LKW29_20920 PF10732 Protein of unknown function (DUF2524) LKW29_20925 PF04055 Radical SAM superfamily LKW29_20925 PF16199 Radical_SAM C-terminal domain LKW29_20930 PF06962 Putative rRNA methylase LKW29_20935 PF13732 Domain of unknown function (DUF4162) LKW29_20935 PF00005 ABC transporter LKW29_20945 PF01177 Asp/Glu/Hydantoin racemase LKW29_20960 PF10776 Protein of unknown function (DUF2600) LKW29_20965 PF12146 Serine aminopeptidase, S33 LKW29_20970 PF00132 Bacterial transferase hexapeptide (six repeats) LKW29_20975 PF01569 PAP2 superfamily LKW29_20980 PF13439 Glycosyltransferase Family 4 LKW29_20980 PF00534 Glycosyl transferases group 1 LKW29_20985 PF12804 MobA-like NTP transferase domain LKW29_20990 PF00994 Probable molybdopterin binding domain LKW29_21005 PF02773 S-adenosylmethionine synthetase, C-terminal domain LKW29_21005 PF00438 S-adenosylmethionine synthetase, N-terminal domain LKW29_21005 PF02772 S-adenosylmethionine synthetase, central domain LKW29_21010 PF01293 Phosphoenolpyruvate carboxykinase LKW29_21045 PF01784 NIF3 (NGG1p interacting factor 3) LKW29_21050 PF13188 PAS domain LKW29_21050 PF00989 PAS fold LKW29_21050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_21050 PF00512 His Kinase A (phospho-acceptor) domain LKW29_21050 PF13426 PAS domain LKW29_21055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_21055 PF00512 His Kinase A (phospho-acceptor) domain LKW29_21055 PF00989 PAS fold LKW29_21055 PF08447 PAS fold LKW29_21060 PF00561 alpha/beta hydrolase fold LKW29_21060 PF08386 TAP-like protein LKW29_21085 PF00005 ABC transporter LKW29_21090 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_21115 PF00293 NUDIX domain LKW29_21140 PF02664 S-Ribosylhomocysteinase (LuxS) LKW29_21145 PF01809 Putative membrane protein insertion efficiency factor LKW29_21150 PF00484 Carbonic anhydrase LKW29_21155 PF01654 Cytochrome bd terminal oxidase subunit I LKW29_21160 PF02322 Cytochrome bd terminal oxidase subunit II LKW29_21165 PF10676 Spore germination protein gerPA/gerPF LKW29_21180 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LKW29_21180 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LKW29_21205 PF04012 PspA/IM30 family LKW29_21220 PF07670 Nucleoside recognition LKW29_21220 PF02421 Ferrous iron transport protein B LKW29_21220 PF07664 Ferrous iron transport protein B C terminus LKW29_21220 PF17910 FeoB cytosolic helical domain LKW29_21230 PF09515 Thiamine transporter protein (Thia_YuaJ) LKW29_21235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_21235 PF00512 His Kinase A (phospho-acceptor) domain LKW29_21235 PF00672 HAMP domain LKW29_21240 PF00072 Response regulator receiver domain LKW29_21240 PF00486 Transcriptional regulatory protein, C terminal LKW29_21265 PF00156 Phosphoribosyl transferase domain LKW29_21270 PF00781 Diacylglycerol kinase catalytic domain LKW29_21290 PF00248 Aldo/keto reductase family LKW29_21305 PF09335 SNARE associated Golgi protein LKW29_21310 PF00398 Ribosomal RNA adenine dimethylase LKW29_21315 PF02687 FtsX-like permease family LKW29_21320 PF00005 ABC transporter LKW29_21325 PF12833 Helix-turn-helix domain LKW29_21325 PF06445 GyrI-like small molecule binding domain LKW29_21330 PF00072 Response regulator receiver domain LKW29_21330 PF00486 Transcriptional regulatory protein, C terminal LKW29_21335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_21340 PF02687 FtsX-like permease family LKW29_21345 PF02687 FtsX-like permease family LKW29_21350 PF00005 ABC transporter LKW29_21365 PF02447 GntP family permease LKW29_21370 PF00392 Bacterial regulatory proteins, gntR family LKW29_21370 PF07702 UTRA domain LKW29_21380 PF07071 KDGP aldolase LKW29_21385 PF03841 L-seryl-tRNA selenium transferase LKW29_21390 PF01979 Amidohydrolase family LKW29_21410 PF00512 His Kinase A (phospho-acceptor) domain LKW29_21410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_21415 PF00072 Response regulator receiver domain LKW29_21415 PF00486 Transcriptional regulatory protein, C terminal LKW29_21420 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LKW29_21420 PF13378 Enolase C-terminal domain-like LKW29_21425 PF13193 AMP-binding enzyme C-terminal domain LKW29_21425 PF00501 AMP-binding enzyme LKW29_21430 PF00378 Enoyl-CoA hydratase/isomerase LKW29_21435 PF00561 alpha/beta hydrolase fold LKW29_21440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LKW29_21440 PF16582 Middle domain of thiamine pyrophosphate LKW29_21440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LKW29_21445 PF00425 chorismate binding enzyme LKW29_21450 PF01040 UbiA prenyltransferase family LKW29_21455 PF01258 Prokaryotic dksA/traR C4-type zinc finger LKW29_21460 PF00313 'Cold-shock' DNA-binding domain LKW29_21475 PF00343 Carbohydrate phosphorylase LKW29_21480 PF00534 Glycosyl transferases group 1 LKW29_21480 PF08323 Starch synthase catalytic domain LKW29_21485 PF00483 Nucleotidyl transferase LKW29_21490 PF00483 Nucleotidyl transferase LKW29_21495 PF02806 Alpha amylase, C-terminal all-beta domain LKW29_21495 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LKW29_21495 PF00128 Alpha amylase, catalytic domain LKW29_21505 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LKW29_21505 PF00056 lactate/malate dehydrogenase, NAD binding domain LKW29_21600 PF05697 Bacterial trigger factor protein (TF) LKW29_21600 PF05698 Bacterial trigger factor protein (TF) C-terminus LKW29_21635 PF02308 MgtC family LKW29_21640 PF07885 Ion channel LKW29_21640 PF02254 TrkA-N domain LKW29_21645 PF08868 YugN-like family LKW29_21650 PF00342 Phosphoglucose isomerase LKW29_21655 PF04070 Domain of unknown function (DUF378) LKW29_21660 PF00575 S1 RNA binding domain LKW29_21665 PF00155 Aminotransferase class I and II LKW29_21670 PF01037 Lrp/AsnC ligand binding domain LKW29_21675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LKW29_21675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LKW29_21680 PF08386 TAP-like protein LKW29_21680 PF00561 alpha/beta hydrolase fold LKW29_21690 PF00155 Aminotransferase class I and II LKW29_21705 PF08810 Kinase associated protein B LKW29_21710 PF00929 Exonuclease LKW29_21715 PF03600 Citrate transporter LKW29_21730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LKW29_21730 PF03129 Anticodon binding domain LKW29_21735 PF03061 Thioesterase superfamily LKW29_21745 PF02632 BioY family LKW29_21755 PF00483 Nucleotidyl transferase LKW29_21760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LKW29_21760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LKW29_21760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LKW29_21760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LKW29_21765 PF10372 Bacterial membrane-spanning protein N-terminus LKW29_21765 PF02457 DisA bacterial checkpoint controller nucleotide-binding LKW29_21770 PF00883 Cytosol aminopeptidase family, catalytic domain LKW29_21770 PF02789 Cytosol aminopeptidase family, N-terminal domain LKW29_21775 PF06725 3D domain LKW29_21785 PF13344 Haloacid dehalogenase-like hydrolase LKW29_21785 PF00293 NUDIX domain LKW29_21790 PF07992 Pyridine nucleotide-disulphide oxidoreductase LKW29_21795 PF07992 Pyridine nucleotide-disulphide oxidoreductase LKW29_21805 PF06445 GyrI-like small molecule binding domain LKW29_21820 PF04463 Protein of unknown function (DUF523) LKW29_21840 PF01521 Iron-sulphur cluster biosynthesis LKW29_21845 PF01678 Diaminopimelate epimerase LKW29_21850 PF07293 Protein of unknown function (DUF1450) LKW29_21855 PF07992 Pyridine nucleotide-disulphide oxidoreductase LKW29_21865 PF00005 ABC transporter LKW29_21865 PF03412 Peptidase C39 family LKW29_21865 PF00664 ABC transporter transmembrane region LKW29_21870 PF03649 Uncharacterised protein family (UPF0014) LKW29_21875 PF03831 PhnA domain LKW29_21875 PF08274 PhnA Zinc-Ribbon LKW29_21910 PF13427 Domain of unknown function (DUF4111) LKW29_21910 PF01909 Nucleotidyltransferase domain LKW29_21915 PF07315 Protein of unknown function (DUF1462) LKW29_21920 PF01106 NifU-like domain LKW29_21935 PF04608 Phosphatidylglycerophosphatase A LKW29_21945 PF02525 Flavodoxin-like fold LKW29_21950 PF13344 Haloacid dehalogenase-like hydrolase LKW29_21960 PF01934 Protein of unknown function DUF86 LKW29_21965 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LKW29_21980 PF06265 Protein of unknown function (DUF1027) LKW29_21985 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LKW29_21990 PF13411 MerR HTH family regulatory protein LKW29_21990 PF07739 TipAS antibiotic-recognition domain LKW29_21995 PF10086 YhfC intramembrane metalloprotease LKW29_22015 PF04055 Radical SAM superfamily LKW29_22015 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LKW29_22020 PF01551 Peptidase family M23 LKW29_22030 PF08827 Domain of unknown function (DUF1805) LKW29_22035 PF02872 5'-nucleotidase, C-terminal domain LKW29_22040 PF03551 Transcriptional regulator PadR-like family LKW29_22045 PF04892 VanZ like family LKW29_22050 PF01458 Uncharacterized protein family (UPF0051) LKW29_22055 PF01592 NifU-like N terminal domain LKW29_22060 PF00266 Aminotransferase class-V LKW29_22065 PF01458 Uncharacterized protein family (UPF0051) LKW29_22070 PF00005 ABC transporter LKW29_22075 PF03180 NLPA lipoprotein LKW29_22085 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_22090 PF00005 ABC transporter LKW29_22090 PF09383 NIL domain LKW29_22100 PF00085 Thioredoxin LKW29_22105 PF01751 Toprim domain LKW29_22110 PF01597 Glycine cleavage H-protein LKW29_22115 PF03960 ArsC family LKW29_22160 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LKW29_22160 PF00056 lactate/malate dehydrogenase, NAD binding domain LKW29_22185 PF00440 Bacterial regulatory proteins, tetR family LKW29_22185 PF13305 Tetracyclin repressor-like, C-terminal domain LKW29_22190 PF00753 Metallo-beta-lactamase superfamily LKW29_22195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LKW29_22195 PF02770 Acyl-CoA dehydrogenase, middle domain LKW29_22195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LKW29_22200 PF02803 Thiolase, C-terminal domain LKW29_22200 PF00108 Thiolase, N-terminal domain LKW29_22205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LKW29_22205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LKW29_22205 PF00378 Enoyl-CoA hydratase/isomerase LKW29_22210 PF14115 YuzL-like protein LKW29_22215 PF07943 Penicillin-binding protein 5, C-terminal domain LKW29_22215 PF00768 D-alanyl-D-alanine carboxypeptidase LKW29_22220 PF01619 Proline dehydrogenase LKW29_22225 PF10835 Protein of unknown function (DUF2573) LKW29_22230 PF01910 Thiamine-binding protein LKW29_22235 PF02743 Cache domain LKW29_22235 PF00672 HAMP domain LKW29_22235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LKW29_22255 PF07690 Major Facilitator Superfamily LKW29_22260 PF13520 Amino acid permease LKW29_22270 PF02096 60Kd inner membrane protein LKW29_22280 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LKW29_22280 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LKW29_22315 PF09335 SNARE associated Golgi protein LKW29_22325 PF17969 L,D-transpeptidase C-terminal domain LKW29_22325 PF03734 L,D-transpeptidase catalytic domain LKW29_22330 PF00486 Transcriptional regulatory protein, C terminal LKW29_22330 PF00072 Response regulator receiver domain LKW29_22335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_22335 PF00512 His Kinase A (phospho-acceptor) domain LKW29_22335 PF00989 PAS fold LKW29_22335 PF16736 Single Cache-like LKW29_22345 PF08264 Anticodon-binding domain of tRNA LKW29_22345 PF09334 tRNA synthetases class I (M) LKW29_22360 PF01883 Iron-sulfur cluster assembly protein LKW29_22365 PF03413 Peptidase propeptide and YPEB domain LKW29_22365 PF01447 Thermolysin metallopeptidase, catalytic domain LKW29_22365 PF02868 Thermolysin metallopeptidase, alpha-helical domain LKW29_22365 PF07504 Fungalysin/Thermolysin Propeptide Motif LKW29_22370 PF02678 Pirin LKW29_22370 PF17954 Quercetinase C-terminal cupin domain LKW29_22375 PF01047 MarR family LKW29_22385 PF00999 Sodium/hydrogen exchanger family LKW29_22390 PF02080 TrkA-C domain LKW29_22400 PF00210 Ferritin-like domain LKW29_22415 PF03641 Possible lysine decarboxylase LKW29_22425 PF00210 Ferritin-like domain LKW29_22435 PF01773 Na+ dependent nucleoside transporter N-terminus LKW29_22435 PF07662 Na+ dependent nucleoside transporter C-terminus LKW29_22440 PF01773 Na+ dependent nucleoside transporter N-terminus LKW29_22440 PF07662 Na+ dependent nucleoside transporter C-terminus LKW29_22445 PF01235 Sodium:alanine symporter family LKW29_22450 PF01235 Sodium:alanine symporter family LKW29_22455 PF13460 NAD(P)H-binding LKW29_22470 PF00248 Aldo/keto reductase family LKW29_22475 PF07690 Major Facilitator Superfamily LKW29_22480 PF01638 HxlR-like helix-turn-helix LKW29_22485 PF07849 Protein of unknown function (DUF1641) LKW29_22490 PF07992 Pyridine nucleotide-disulphide oxidoreductase LKW29_22495 PF01479 S4 domain LKW29_22495 PF00579 tRNA synthetases class I (W and Y) LKW29_22500 PF01565 FAD binding domain LKW29_22500 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LKW29_22510 PF00672 HAMP domain LKW29_22510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LKW29_22510 PF17202 Single cache domain 3 LKW29_22520 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LKW29_22525 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LKW29_22540 PF13302 Acetyltransferase (GNAT) domain LKW29_22545 PF06146 Phosphate-starvation-inducible E LKW29_22560 PF00005 ABC transporter LKW29_22565 PF01032 FecCD transport family LKW29_22570 PF01032 FecCD transport family LKW29_22580 PF00486 Transcriptional regulatory protein, C terminal LKW29_22580 PF00072 Response regulator receiver domain LKW29_22590 PF01668 SmpB protein LKW29_22595 PF00773 RNB domain LKW29_22595 PF17876 Cold shock domain LKW29_22595 PF08206 Ribonuclease B OB domain LKW29_22595 PF00575 S1 RNA binding domain LKW29_22600 PF12146 Serine aminopeptidase, S33 LKW29_22605 PF03840 Preprotein translocase SecG subunit LKW29_22610 PF04172 LrgB-like family LKW29_22615 PF03788 LrgA family LKW29_22620 PF01156 Inosine-uridine preferring nucleoside hydrolase LKW29_22710 PF04860 Phage portal protein LKW29_22730 PF00589 Phage integrase family LKW29_22730 PF02899 Phage integrase, N-terminal SAM-like domain LKW29_22735 PF00113 Enolase, C-terminal TIM barrel domain LKW29_22735 PF03952 Enolase, N-terminal domain LKW29_22740 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LKW29_22740 PF01676 Metalloenzyme superfamily LKW29_22745 PF00121 Triosephosphate isomerase LKW29_22750 PF00162 Phosphoglycerate kinase LKW29_22755 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LKW29_22755 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LKW29_22760 PF04198 Putative sugar-binding domain LKW29_22770 PF04552 Sigma-54, DNA binding domain LKW29_22770 PF04963 Sigma-54 factor, core binding domain LKW29_22770 PF00309 Sigma-54 factor, Activator interacting domain (AID) LKW29_22790 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LKW29_22795 PF07451 Stage V sporulation protein AD (SpoVAD) LKW29_22800 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LKW29_22810 PF04239 Protein of unknown function (DUF421) LKW29_22815 PF00574 Clp protease LKW29_22820 PF00381 PTS HPr component phosphorylation site LKW29_22830 PF01933 Uncharacterised protein family UPF0052 LKW29_22835 PF03668 P-loop ATPase protein family LKW29_22840 PF00293 NUDIX domain LKW29_22850 PF07992 Pyridine nucleotide-disulphide oxidoreductase LKW29_22860 PF14602 Hexapeptide repeat of succinyl-transferase LKW29_22865 PF13419 Haloacid dehalogenase-like hydrolase LKW29_22870 PF01790 Prolipoprotein diacylglyceryl transferase LKW29_22875 PF02603 HPr Serine kinase N terminus LKW29_22875 PF07475 HPr Serine kinase C-terminal domain LKW29_22880 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LKW29_22890 PF17755 UvrA DNA-binding domain LKW29_22890 PF00005 ABC transporter LKW29_22890 PF17760 UvrA interaction domain LKW29_22895 PF17757 UvrB interaction domain LKW29_22895 PF04851 Type III restriction enzyme, res subunit LKW29_22895 PF02151 UvrB/uvrC motif LKW29_22895 PF12344 Ultra-violet resistance protein B LKW29_22895 PF00271 Helicase conserved C-terminal domain LKW29_22900 PF12323 Helix-turn-helix domain LKW29_22900 PF07282 Putative transposase DNA-binding domain LKW29_22900 PF01385 Probable transposase LKW29_22915 PF13411 MerR HTH family regulatory protein LKW29_22915 PF07739 TipAS antibiotic-recognition domain LKW29_22940 PF03601 Conserved hypothetical protein 698 LKW29_22945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LKW29_22945 PF03466 LysR substrate binding domain LKW29_22950 PF13411 MerR HTH family regulatory protein LKW29_22955 PF03358 NADPH-dependent FMN reductase LKW29_22960 PF00005 ABC transporter LKW29_22960 PF12848 ABC transporter LKW29_22965 PF01906 Putative heavy-metal-binding LKW29_22970 PF00664 ABC transporter transmembrane region LKW29_22970 PF00005 ABC transporter LKW29_22975 PF17820 PDZ domain LKW29_22980 PF17820 PDZ domain LKW29_22980 PF01471 Putative peptidoglycan binding domain LKW29_22980 PF03572 Peptidase family S41 LKW29_22985 PF18075 FtsX extracellular domain LKW29_22985 PF02687 FtsX-like permease family LKW29_22990 PF00005 ABC transporter LKW29_22995 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LKW29_23005 PF07517 SecA DEAD-like domain LKW29_23005 PF07516 SecA Wing and Scaffold domain LKW29_23005 PF02810 SEC-C motif LKW29_23005 PF01043 SecA preprotein cross-linking domain LKW29_23010 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LKW29_23010 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LKW29_23015 PF00313 'Cold-shock' DNA-binding domain LKW29_23025 PF00271 Helicase conserved C-terminal domain LKW29_23025 PF04851 Type III restriction enzyme, res subunit LKW29_23030 PF00877 NlpC/P60 family LKW29_23030 PF01476 LysM domain LKW29_23035 PF01638 HxlR-like helix-turn-helix LKW29_23040 PF02645 Uncharacterised protein, DegV family COG1307 LKW29_23045 PF01205 Uncharacterized protein family UPF0029 LKW29_23045 PF09186 Domain of unknown function (DUF1949) LKW29_23050 PF03816 Cell envelope-related transcriptional attenuator domain LKW29_23055 PF02350 UDP-N-acetylglucosamine 2-epimerase LKW29_23060 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LKW29_23060 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LKW29_23060 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LKW29_23065 PF00953 Glycosyl transferase family 4 LKW29_23070 PF01522 Polysaccharide deacetylase LKW29_23075 PF00158 Sigma-54 interaction domain LKW29_23075 PF03610 PTS system fructose IIA component LKW29_23075 PF00874 PRD domain LKW29_23085 PF02417 Chromate transporter LKW29_23090 PF04794 YdjC-like protein LKW29_23095 PF02056 Family 4 glycosyl hydrolase LKW29_23095 PF11975 Family 4 glycosyl hydrolase C-terminal domain LKW29_23100 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LKW29_23105 PF02378 Phosphotransferase system, EIIC LKW29_23110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LKW29_23120 PF02675 S-adenosylmethionine decarboxylase LKW29_23125 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LKW29_23130 PF02378 Phosphotransferase system, EIIC LKW29_23135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LKW29_23140 PF00375 Sodium:dicarboxylate symporter family LKW29_23150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LKW29_23160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LKW29_23160 PF03466 LysR substrate binding domain LKW29_23185 PF02322 Cytochrome bd terminal oxidase subunit II LKW29_23190 PF02040 Arsenical pump membrane protein LKW29_23195 PF13667 ThiC-associated domain LKW29_23195 PF01964 Radical SAM ThiC family LKW29_23210 PF09988 Uncharacterized metal-binding protein (DUF2227) LKW29_23220 PF00884 Sulfatase LKW29_23225 PF01063 Amino-transferase class IV LKW29_23235 PF07662 Na+ dependent nucleoside transporter C-terminus LKW29_23235 PF01773 Na+ dependent nucleoside transporter N-terminus LKW29_23250 PF02028 BCCT, betaine/carnitine/choline family transporter LKW29_23255 PF01476 LysM domain LKW29_23255 PF06725 3D domain LKW29_23280 PF04434 SWIM zinc finger LKW29_23285 PF12419 SNF2 Helicase protein LKW29_23285 PF00271 Helicase conserved C-terminal domain LKW29_23285 PF00176 SNF2 family N-terminal domain LKW29_23315 PF04545 Sigma-70, region 4 LKW29_23315 PF04542 Sigma-70 region 2 LKW29_23320 PF04893 Yip1 domain LKW29_23325 PF02687 FtsX-like permease family LKW29_23325 PF12704 MacB-like periplasmic core domain LKW29_23330 PF00005 ABC transporter LKW29_23350 PF07690 Major Facilitator Superfamily LKW29_23365 PF00989 PAS fold LKW29_23365 PF00512 His Kinase A (phospho-acceptor) domain LKW29_23365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_23365 PF16736 Single Cache-like LKW29_23370 PF00486 Transcriptional regulatory protein, C terminal LKW29_23370 PF00072 Response regulator receiver domain LKW29_23375 PF16363 GDP-mannose 4,6 dehydratase LKW29_23380 PF03816 Cell envelope-related transcriptional attenuator domain LKW29_23390 PF07977 FabA-like domain LKW29_23395 PF02350 UDP-N-acetylglucosamine 2-epimerase LKW29_23400 PF08239 Bacterial SH3 domain LKW29_23400 PF00005 ABC transporter LKW29_23405 PF01061 ABC-2 type transporter LKW29_23410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LKW29_23410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LKW29_23410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LKW29_23455 PF12116 Stage III sporulation protein D LKW29_23470 PF01551 Peptidase family M23 LKW29_23480 PF00005 ABC transporter LKW29_23490 PF08486 Stage II sporulation protein LKW29_23495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LKW29_23505 PF06612 Protein of unknown function (DUF1146) LKW29_23510 PF00361 Proton-conducting membrane transporter LKW29_23515 PF00361 Proton-conducting membrane transporter LKW29_23520 PF00361 Proton-conducting membrane transporter LKW29_23520 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus LKW29_23520 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LKW29_23525 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LKW29_23530 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LKW29_23540 PF00146 NADH dehydrogenase LKW29_23545 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LKW29_23550 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LKW29_23555 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LKW29_23560 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LKW29_23565 PF00990 Diguanylate cyclase, GGDEF domain LKW29_23565 PF03707 Bacterial signalling protein N terminal repeat LKW29_23565 PF00563 EAL domain LKW29_23580 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LKW29_23580 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LKW29_23585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LKW29_23585 PF02874 ATP synthase alpha/beta family, beta-barrel domain LKW29_23590 PF00231 ATP synthase LKW29_23595 PF02874 ATP synthase alpha/beta family, beta-barrel domain LKW29_23595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LKW29_23595 PF00306 ATP synthase alpha/beta chain, C terminal domain LKW29_23600 PF00213 ATP synthase delta (OSCP) subunit LKW29_23605 PF00430 ATP synthase B/B' CF(0) LKW29_23610 PF00137 ATP synthase subunit C LKW29_23615 PF00119 ATP synthase A chain LKW29_23620 PF03899 ATP synthase I chain LKW29_23640 PF00464 Serine hydroxymethyltransferase LKW29_23645 PF04260 Protein of unknown function (DUF436) LKW29_23650 PF02502 Ribose/Galactose Isomerase LKW29_23655 PF01451 Low molecular weight phosphotyrosine protein phosphatase LKW29_23660 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LKW29_23665 PF07681 DoxX LKW29_23670 PF01613 Flavin reductase like domain LKW29_23680 PF02659 Putative manganese efflux pump LKW29_23685 PF03481 Putative GTP-binding controlling metal-binding LKW29_23685 PF01300 Telomere recombination LKW29_23695 PF09551 Stage II sporulation protein R (spore_II_R) LKW29_23700 PF17827 PrmC N-terminal domain LKW29_23700 PF13847 Methyltransferase domain LKW29_23705 PF00472 RF-1 domain LKW29_23705 PF03462 PCRF domain LKW29_23710 PF00265 Thymidine kinase LKW29_23715 PF01197 Ribosomal protein L31 LKW29_23720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LKW29_23720 PF07498 Rho termination factor, N-terminal domain LKW29_23720 PF07497 Rho termination factor, RNA-binding domain LKW29_23725 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LKW29_23730 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LKW29_23735 PF01116 Fructose-bisphosphate aldolase class-II LKW29_23740 PF00072 Response regulator receiver domain LKW29_23745 PF10740 Domain of unknown function (DUF2529) LKW29_23750 PF06418 CTP synthase N-terminus LKW29_23750 PF00117 Glutamine amidotransferase class-I LKW29_23755 PF05066 HB1, ASXL, restriction endonuclease HTH domain LKW29_23765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LKW29_23765 PF02770 Acyl-CoA dehydrogenase, middle domain LKW29_23765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LKW29_23770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LKW29_23770 PF02770 Acyl-CoA dehydrogenase, middle domain LKW29_23770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LKW29_23775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LKW29_23775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LKW29_23780 PF02803 Thiolase, C-terminal domain LKW29_23780 PF00108 Thiolase, N-terminal domain LKW29_23785 PF02754 Cysteine-rich domain LKW29_23785 PF13183 4Fe-4S dicluster domain LKW29_23790 PF13091 PLD-like domain LKW29_23795 PF03851 UV-endonuclease UvdE LKW29_23800 PF00563 EAL domain LKW29_23800 PF00990 Diguanylate cyclase, GGDEF domain LKW29_23800 PF03707 Bacterial signalling protein N terminal repeat LKW29_23820 PF00196 Bacterial regulatory proteins, luxR family LKW29_23820 PF00072 Response regulator receiver domain LKW29_23825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_23825 PF07730 Histidine kinase LKW29_23835 PF00005 ABC transporter LKW29_23840 PF00557 Metallopeptidase family M24 LKW29_23850 PF02225 PA domain LKW29_23850 PF04389 Peptidase family M28 LKW29_23870 PF08281 Sigma-70, region 4 LKW29_23870 PF04542 Sigma-70 region 2 LKW29_23875 PF00750 tRNA synthetases class I (R) LKW29_23875 PF05746 DALR anticodon binding domain LKW29_23875 PF03485 Arginyl tRNA synthetase N terminal domain LKW29_23880 PF09148 Domain of unknown function (DUF1934) LKW29_23885 PF02016 LD-carboxypeptidase N-terminal domain LKW29_23885 PF17676 LD-carboxypeptidase C-terminal domain LKW29_23900 PF00491 Arginase family LKW29_23905 PF17284 Spermidine synthase tetramerisation domain LKW29_23910 PF07690 Major Facilitator Superfamily LKW29_23915 PF13411 MerR HTH family regulatory protein LKW29_23920 PF03009 Glycerophosphoryl diester phosphodiesterase family LKW29_23925 PF00912 Transglycosylase LKW29_23925 PF00905 Penicillin binding protein transpeptidase domain LKW29_23930 PF08741 YwhD family LKW29_23935 PF02163 Peptidase family M50 LKW29_23940 PF01361 Tautomerase enzyme LKW29_23945 PF01966 HD domain LKW29_23950 PF01497 Periplasmic binding protein LKW29_23955 PF00005 ABC transporter LKW29_23960 PF01032 FecCD transport family LKW29_23965 PF01032 FecCD transport family LKW29_23970 PF07293 Protein of unknown function (DUF1450) LKW29_23985 PF03099 Biotin/lipoate A/B protein ligase family LKW29_23990 PF01515 Phosphate acetyl/butaryl transferase LKW29_23995 PF06778 Chlorite dismutase LKW29_24000 PF07943 Penicillin-binding protein 5, C-terminal domain LKW29_24000 PF00768 D-alanyl-D-alanine carboxypeptidase LKW29_24005 PF07486 Cell Wall Hydrolase LKW29_24010 PF09671 Spore coat protein (Spore_GerQ) LKW29_24015 PF04241 Protein of unknown function (DUF423) LKW29_24025 PF07885 Ion channel LKW29_24025 PF02254 TrkA-N domain LKW29_24030 PF00860 Permease family LKW29_24040 PF12823 Domain of unknown function (DUF3817) LKW29_24045 PF03167 Uracil DNA glycosylase superfamily LKW29_24050 PF12679 ABC-2 family transporter protein LKW29_24055 PF00005 ABC transporter LKW29_24060 PF13472 GDSL-like Lipase/Acylhydrolase family LKW29_24065 PF00356 Bacterial regulatory proteins, lacI family LKW29_24065 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LKW29_24075 PF03447 Homoserine dehydrogenase, NAD binding domain LKW29_24075 PF00742 Homoserine dehydrogenase LKW29_24075 PF01842 ACT domain LKW29_24080 PF04204 Homoserine O-succinyltransferase LKW29_24085 PF01053 Cys/Met metabolism PLP-dependent enzyme LKW29_24095 PF13419 Haloacid dehalogenase-like hydrolase LKW29_24100 PF00027 Cyclic nucleotide-binding domain LKW29_24105 PF02525 Flavodoxin-like fold LKW29_24110 PF00072 Response regulator receiver domain LKW29_24110 PF00196 Bacterial regulatory proteins, luxR family LKW29_24120 PF08543 Phosphomethylpyrimidine kinase LKW29_24125 PF07694 5TMR of 5TMR-LYT LKW29_24125 PF00990 Diguanylate cyclase, GGDEF domain LKW29_24130 PF04328 Selenoprotein, putative LKW29_24135 PF02554 Carbon starvation protein CstA LKW29_24135 PF13722 5TM C-terminal transporter carbon starvation CstA LKW29_24140 PF04397 LytTr DNA-binding domain LKW29_24140 PF00072 Response regulator receiver domain LKW29_24145 PF07690 Major Facilitator Superfamily LKW29_24150 PF03808 Glycosyl transferase WecB/TagA/CpsF family LKW29_24165 PF03458 UPF0126 domain LKW29_24170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LKW29_24180 PF03061 Thioesterase superfamily LKW29_24190 PF00535 Glycosyl transferase family 2 LKW29_24195 PF00005 ABC transporter LKW29_24195 PF12848 ABC transporter LKW29_24215 PF00535 Glycosyl transferase family 2 LKW29_24220 PF00440 Bacterial regulatory proteins, tetR family LKW29_24225 PF00873 AcrB/AcrD/AcrF family LKW29_24230 PF01641 SelR domain LKW29_24230 PF01625 Peptide methionine sulfoxide reductase LKW29_24235 PF01594 AI-2E family transporter LKW29_24240 PF04172 LrgB-like family LKW29_24245 PF03788 LrgA family LKW29_24250 PF04397 LytTr DNA-binding domain LKW29_24250 PF00072 Response regulator receiver domain LKW29_24255 PF07694 5TMR of 5TMR-LYT LKW29_24255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_24255 PF13492 GAF domain LKW29_24255 PF06580 Histidine kinase LKW29_24260 PF07690 Major Facilitator Superfamily LKW29_24265 PF02028 BCCT, betaine/carnitine/choline family transporter LKW29_24270 PF02898 Nitric oxide synthase, oxygenase domain LKW29_24275 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LKW29_24275 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LKW29_24285 PF02293 AmiS/UreI family transporter LKW29_24295 PF16363 GDP-mannose 4,6 dehydratase LKW29_24300 PF03006 Haemolysin-III related LKW29_24310 PF00270 DEAD/DEAH box helicase LKW29_24310 PF00271 Helicase conserved C-terminal domain LKW29_24310 PF03880 DbpA RNA binding domain LKW29_24320 PF00478 IMP dehydrogenase / GMP reductase domain LKW29_24325 PF08439 Oligopeptidase F LKW29_24325 PF01432 Peptidase family M3 LKW29_24335 PF02590 Predicted SPOUT methyltransferase LKW29_24345 PF13180 PDZ domain LKW29_24350 PF00753 Metallo-beta-lactamase superfamily LKW29_24355 PF09648 YycH protein LKW29_24360 PF07435 YycH protein LKW29_24365 PF00672 HAMP domain LKW29_24365 PF00512 His Kinase A (phospho-acceptor) domain LKW29_24365 PF13426 PAS domain LKW29_24365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_24370 PF00072 Response regulator receiver domain LKW29_24370 PF00486 Transcriptional regulatory protein, C terminal LKW29_24395 PF00709 Adenylosuccinate synthetase LKW29_24400 PF03796 DnaB-like helicase C terminal domain LKW29_24400 PF00772 DnaB-like helicase N terminal domain LKW29_24405 PF03948 Ribosomal protein L9, C-terminal domain LKW29_24405 PF01281 Ribosomal protein L9, N-terminal domain LKW29_24410 PF02272 DHHA1 domain LKW29_24410 PF01368 DHH family LKW29_24415 PF09991 Predicted membrane protein (DUF2232) LKW29_24420 PF01084 Ribosomal protein S18 LKW29_24425 PF00436 Single-strand binding protein family LKW29_24430 PF01250 Ribosomal protein S6 LKW29_24435 PF01926 50S ribosome-binding GTPase LKW29_24435 PF06071 Protein of unknown function (DUF933) LKW29_24440 PF06107 Bacterial protein of unknown function (DUF951) LKW29_24445 PF00924 Mechanosensitive ion channel LKW29_24450 PF06866 Protein of unknown function (DUF1256) LKW29_24455 PF17762 HTH domain found in ParB protein LKW29_24455 PF02195 ParB-like nuclease domain LKW29_24460 PF13614 AAA domain LKW29_24465 PF02195 ParB-like nuclease domain LKW29_24465 PF17762 HTH domain found in ParB protein LKW29_24470 PF02527 rRNA small subunit methyltransferase G LKW29_24475 PF13932 GidA associated domain LKW29_24475 PF01134 Glucose inhibited division protein A LKW29_24480 PF01926 50S ribosome-binding GTPase LKW29_24480 PF12631 MnmE helical domain LKW29_24480 PF10396 GTP-binding protein TrmE N-terminus LKW29_24485 PF14804 Jag N-terminus LKW29_24485 PF01424 R3H domain LKW29_24490 PF02096 60Kd inner membrane protein LKW29_24495 PF00825 Ribonuclease P LKW29_24500 PF00468 Ribosomal protein L34 LKW29_24505 PF00308 Bacterial dnaA protein LKW29_24505 PF08299 Bacterial dnaA protein helix-turn-helix LKW29_24505 PF11638 DnaA N-terminal domain LKW29_24510 PF02768 DNA polymerase III beta subunit, C-terminal domain LKW29_24510 PF00712 DNA polymerase III beta subunit, N-terminal domain LKW29_24510 PF02767 DNA polymerase III beta subunit, central domain LKW29_24520 PF02463 RecF/RecN/SMC N terminal domain LKW29_24530 PF03989 DNA gyrase C-terminal domain, beta-propeller LKW29_24530 PF00521 DNA gyrase/topoisomerase IV, subunit A LKW29_24565 PF00571 CBS domain LKW29_24565 PF00478 IMP dehydrogenase / GMP reductase domain LKW29_24570 PF00768 D-alanyl-D-alanine carboxypeptidase LKW29_24570 PF07943 Penicillin-binding protein 5, C-terminal domain LKW29_24575 PF01680 SOR/SNZ family LKW29_24580 PF01174 SNO glutamine amidotransferase family LKW29_24585 PF02403 Seryl-tRNA synthetase N-terminal domain LKW29_24585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LKW29_24600 PF01712 Deoxynucleoside kinase LKW29_24605 PF01712 Deoxynucleoside kinase LKW29_24610 PF00857 Isochorismatase family LKW29_24615 PF14437 MafB19-like deaminase LKW29_24625 PF12169 DNA polymerase III subunits gamma and tau domain III LKW29_24630 PF02575 YbaB/EbfC DNA-binding family LKW29_24635 PF13662 Toprim domain LKW29_24635 PF02132 RecR protein LKW29_24640 PF10704 Protein of unknown function (DUF2508) LKW29_24645 PF07441 SigmaK-factor processing regulatory protein BofA LKW29_24680 PF01276 Orn/Lys/Arg decarboxylase, major domain LKW29_24680 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LKW29_24685 PF02223 Thymidylate kinase LKW29_24690 PF09115 DNA polymerase III, delta subunit, C terminal LKW29_24695 PF04468 PSP1 C-terminal conserved region LKW29_24700 PF06156 Initiation control protein YabA LKW29_24705 PF05175 Methyltransferase small domain LKW29_24710 PF01541 GIY-YIG catalytic domain LKW29_24715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LKW29_24720 PF18277 AbrB C-terminal domain LKW29_24720 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LKW29_24725 PF08264 Anticodon-binding domain of tRNA LKW29_24725 PF09334 tRNA synthetases class I (M) LKW29_24725 PF01588 Putative tRNA binding domain LKW29_24730 PF01026 TatD related DNase LKW29_24735 PF13662 Toprim domain LKW29_24735 PF13331 Domain of unknown function (DUF4093) LKW29_24740 PF00398 Ribosomal RNA adenine dimethylase LKW29_24745 PF05582 YabG peptidase U57 LKW29_24750 PF06257 Biofilm formation stimulator VEG LKW29_24755 PF00269 Small, acid-soluble spore proteins, alpha/beta type LKW29_24760 PF08544 GHMP kinases C terminal LKW29_24760 PF00288 GHMP kinases N terminal domain LKW29_24765 PF00156 Phosphoribosyl transferase domain LKW29_24765 PF09182 Bacterial purine repressor, N-terminal LKW29_24770 PF01042 Endoribonuclease L-PSP LKW29_24775 PF04026 SpoVG LKW29_24780 PF00132 Bacterial transferase hexapeptide (six repeats) LKW29_24780 PF00483 Nucleotidyl transferase LKW29_24785 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LKW29_24785 PF14572 Phosphoribosyl synthetase-associated domain LKW29_24790 PF01195 Peptidyl-tRNA hydrolase LKW29_24805 PF15714 Stage V sporulation protein T C-terminal, transcription factor LKW29_24805 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LKW29_24815 PF03819 MazG nucleotide pyrophosphohydrolase domain LKW29_24815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LKW29_24820 PF01479 S4 domain LKW29_24825 PF07873 YabP family LKW29_24830 PF09578 Spore cortex protein YabQ (Spore_YabQ) LKW29_24840 PF00575 S1 RNA binding domain LKW29_24855 PF07228 Stage II sporulation protein E (SpoIIE) LKW29_24865 PF00156 Phosphoribosyl transferase domain LKW29_24870 PF00004 ATPase family associated with various cellular activities (AAA) LKW29_24870 PF17862 AAA+ lid domain LKW29_24870 PF06480 FtsH Extracellular LKW29_24870 PF01434 Peptidase family M41 LKW29_24875 PF03309 Type III pantothenate kinase LKW29_24880 PF01430 Hsp33 protein LKW29_24885 PF00291 Pyridoxal-phosphate dependent enzyme LKW29_24890 PF04715 Anthranilate synthase component I, N terminal region LKW29_24890 PF00425 chorismate binding enzyme LKW29_24895 PF00117 Glutamine amidotransferase class-I LKW29_24900 PF01063 Amino-transferase class IV LKW29_24905 PF00809 Pterin binding enzyme LKW29_24910 PF02152 Dihydroneopterin aldolase LKW29_24915 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LKW29_24920 PF01381 Helix-turn-helix LKW29_24925 PF01207 Dihydrouridine synthase (Dus) LKW29_24930 PF00152 tRNA synthetases class II (D, K and N) LKW29_24930 PF01336 OB-fold nucleic acid binding domain LKW29_24950 PF17727 CtsR C-terminal dimerization domain LKW29_24950 PF05848 CtsR N-terminal HTH domain LKW29_24955 PF02151 UvrB/uvrC motif LKW29_24960 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain LKW29_24965 PF00004 ATPase family associated with various cellular activities (AAA) LKW29_24965 PF07724 AAA domain (Cdc48 subfamily) LKW29_24965 PF17871 AAA lid domain LKW29_24965 PF02861 Clp amino terminal domain, pathogenicity island component LKW29_24965 PF10431 C-terminal, D2-small domain, of ClpB protein LKW29_24970 PF18073 Rubredoxin metal binding domain LKW29_24975 PF02457 DisA bacterial checkpoint controller nucleotide-binding LKW29_24975 PF10635 DisA bacterial checkpoint controller linker region LKW29_24985 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LKW29_24990 PF02542 YgbB family LKW29_24995 PF00749 tRNA synthetases class I (E and Q), catalytic domain LKW29_25000 PF00132 Bacterial transferase hexapeptide (six repeats) LKW29_25000 PF06426 Serine acetyltransferase, N-terminal LKW29_25005 PF09190 DALR domain LKW29_25005 PF01406 tRNA synthetases class I (C) catalytic domain LKW29_25010 PF00636 Ribonuclease III domain LKW29_25015 PF00588 SpoU rRNA Methylase family LKW29_25015 PF08032 RNA 2'-O ribose methyltransferase substrate binding LKW29_25020 PF05991 YacP-like NYN domain LKW29_25025 PF04542 Sigma-70 region 2 LKW29_25025 PF08281 Sigma-70, region 4 LKW29_25030 PF00471 Ribosomal protein L33 LKW29_25035 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LKW29_25040 PF00467 KOW motif LKW29_25040 PF02357 Transcription termination factor nusG LKW29_25045 PF03946 Ribosomal protein L11, N-terminal domain LKW29_25045 PF00298 Ribosomal protein L11, RNA binding domain LKW29_25050 PF00687 Ribosomal protein L1p/L10e family LKW29_25055 PF00466 Ribosomal protein L10 LKW29_25060 PF00542 Ribosomal protein L7/L12 C-terminal domain LKW29_25060 PF16320 Ribosomal protein L7/L12 dimerisation domain LKW29_25065 PF05175 Methyltransferase small domain LKW29_25070 PF04565 RNA polymerase Rpb2, domain 3 LKW29_25070 PF04561 RNA polymerase Rpb2, domain 2 LKW29_25070 PF04563 RNA polymerase beta subunit LKW29_25070 PF04560 RNA polymerase Rpb2, domain 7 LKW29_25070 PF00562 RNA polymerase Rpb2, domain 6 LKW29_25070 PF10385 RNA polymerase beta subunit external 1 domain LKW29_25075 PF04997 RNA polymerase Rpb1, domain 1 LKW29_25075 PF00623 RNA polymerase Rpb1, domain 2 LKW29_25075 PF04983 RNA polymerase Rpb1, domain 3 LKW29_25075 PF05000 RNA polymerase Rpb1, domain 4 LKW29_25075 PF04998 RNA polymerase Rpb1, domain 5 LKW29_25080 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LKW29_25085 PF00164 Ribosomal protein S12/S23 LKW29_25090 PF00177 Ribosomal protein S7p/S5e LKW29_25095 PF03144 Elongation factor Tu domain 2 LKW29_25095 PF00009 Elongation factor Tu GTP binding domain LKW29_25095 PF00679 Elongation factor G C-terminus LKW29_25095 PF03764 Elongation factor G, domain IV LKW29_25095 PF14492 Elongation Factor G, domain II LKW29_25100 PF00009 Elongation factor Tu GTP binding domain LKW29_25100 PF03144 Elongation factor Tu domain 2 LKW29_25100 PF03143 Elongation factor Tu C-terminal domain LKW29_25105 PF00338 Ribosomal protein S10p/S20e LKW29_25110 PF00297 Ribosomal protein L3 LKW29_25115 PF00573 Ribosomal protein L4/L1 family LKW29_25120 PF00276 Ribosomal protein L23 LKW29_25125 PF00181 Ribosomal Proteins L2, RNA binding domain LKW29_25125 PF03947 Ribosomal Proteins L2, C-terminal domain LKW29_25130 PF00203 Ribosomal protein S19 LKW29_25135 PF00237 Ribosomal protein L22p/L17e LKW29_25140 PF07650 KH domain LKW29_25140 PF00189 Ribosomal protein S3, C-terminal domain LKW29_25145 PF00252 Ribosomal protein L16p/L10e LKW29_25150 PF00831 Ribosomal L29 protein LKW29_25155 PF00366 Ribosomal protein S17 LKW29_25160 PF00238 Ribosomal protein L14p/L23e LKW29_25165 PF00467 KOW motif LKW29_25165 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LKW29_25170 PF00281 Ribosomal protein L5 LKW29_25170 PF00673 ribosomal L5P family C-terminus LKW29_25175 PF00253 Ribosomal protein S14p/S29e LKW29_25180 PF00410 Ribosomal protein S8 LKW29_25185 PF00347 Ribosomal protein L6 LKW29_25190 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LKW29_25195 PF00333 Ribosomal protein S5, N-terminal domain LKW29_25195 PF03719 Ribosomal protein S5, C-terminal domain LKW29_25200 PF00327 Ribosomal protein L30p/L7e LKW29_25205 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LKW29_25210 PF00344 SecY translocase LKW29_25215 PF05191 Adenylate kinase, active site lid LKW29_25220 PF00557 Metallopeptidase family M24 LKW29_25225 PF01176 Translation initiation factor 1A / IF-1 LKW29_25230 PF00444 Ribosomal protein L36 LKW29_25235 PF00416 Ribosomal protein S13/S18 LKW29_25240 PF00411 Ribosomal protein S11 LKW29_25245 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LKW29_25245 PF01000 RNA polymerase Rpb3/RpoA insert domain LKW29_25245 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LKW29_25250 PF01196 Ribosomal protein L17 LKW29_25255 PF00005 ABC transporter LKW29_25260 PF00005 ABC transporter LKW29_25265 PF02361 Cobalt transport protein LKW29_25270 PF01416 tRNA pseudouridine synthase LKW29_25275 PF00572 Ribosomal protein L13 LKW29_25280 PF00380 Ribosomal protein S9/S16 LKW29_25290 PF01520 N-acetylmuramoyl-L-alanine amidase LKW29_25295 PF10609 NUBPL iron-transfer P-loop NTPase LKW29_25300 PF17898 Spore germination GerD central core domain LKW29_25305 PF14089 KinB-signalling pathway activation in sporulation LKW29_25310 PF01522 Polysaccharide deacetylase LKW29_25385 PF00491 Arginase family LKW29_25390 PF02457 DisA bacterial checkpoint controller nucleotide-binding LKW29_25395 PF07949 YbbR-like protein LKW29_25400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LKW29_25400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LKW29_25400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LKW29_25400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LKW29_25410 PF01380 SIS domain LKW29_25415 PF00561 alpha/beta hydrolase fold LKW29_25420 PF00392 Bacterial regulatory proteins, gntR family LKW29_25420 PF07729 FCD domain LKW29_25425 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LKW29_25425 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LKW29_25430 PF02447 GntP family permease LKW29_25435 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LKW29_25435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LKW29_25440 PF07676 WD40-like Beta Propeller Repeat LKW29_25440 PF00326 Prolyl oligopeptidase family LKW29_25475 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_25480 PF00005 ABC transporter LKW29_25480 PF09383 NIL domain LKW29_25485 PF03180 NLPA lipoprotein LKW29_25490 PF08240 Alcohol dehydrogenase GroES-like domain LKW29_25490 PF00107 Zinc-binding dehydrogenase LKW29_25505 PF07690 Major Facilitator Superfamily LKW29_25515 PF07690 Major Facilitator Superfamily LKW29_25530 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_25535 PF12911 N-terminal TM domain of oligopeptide transport permease C LKW29_25535 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_25540 PF00005 ABC transporter LKW29_25540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LKW29_25545 PF00005 ABC transporter LKW29_25545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LKW29_25550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_25560 PF12833 Helix-turn-helix domain LKW29_25575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_25580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_25585 PF00248 Aldo/keto reductase family LKW29_25595 PF04973 Nicotinamide mononucleotide transporter LKW29_25600 PF06800 Sugar transport protein LKW29_25605 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_25615 PF12728 Helix-turn-helix domain LKW29_25615 PF12727 PBP superfamily domain LKW29_25625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LKW29_25625 PF03466 LysR substrate binding domain LKW29_25630 PF00892 EamA-like transporter family LKW29_25635 PF14142 YrzO-like protein LKW29_25645 PF01553 Acyltransferase LKW29_25665 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LKW29_25665 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LKW29_25675 PF01026 TatD related DNase LKW29_25680 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) LKW29_25705 PF12848 ABC transporter LKW29_25705 PF00005 ABC transporter LKW29_25705 PF16326 ABC transporter C-terminal domain LKW29_25720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_25725 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_25730 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_25730 PF12911 N-terminal TM domain of oligopeptide transport permease C LKW29_25735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LKW29_25735 PF00005 ABC transporter LKW29_25740 PF00005 ABC transporter LKW29_25740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LKW29_25770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LKW29_25775 PF01557 Fumarylacetoacetate (FAA) hydrolase family LKW29_25785 PF07690 Major Facilitator Superfamily LKW29_25795 PF02875 Mur ligase family, glutamate ligase domain LKW29_25795 PF08245 Mur ligase middle domain LKW29_25795 PF01225 Mur ligase family, catalytic domain LKW29_25800 PF00270 DEAD/DEAH box helicase LKW29_25800 PF00271 Helicase conserved C-terminal domain LKW29_25805 PF03851 UV-endonuclease UvdE LKW29_25810 PF01694 Rhomboid family LKW29_25815 PF01648 4'-phosphopantetheinyl transferase superfamily LKW29_25825 PF00842 Alanine racemase, C-terminal domain LKW29_25825 PF01168 Alanine racemase, N-terminal domain LKW29_25830 PF01402 Ribbon-helix-helix protein, copG family LKW29_25835 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LKW29_25840 PF17674 HHH domain LKW29_25840 PF00575 S1 RNA binding domain LKW29_25840 PF16921 Tex protein YqgF-like domain LKW29_25840 PF09371 Tex-like protein N-terminal domain LKW29_25850 PF10263 SprT-like family LKW29_25850 PF17283 SprT-like zinc ribbon domain LKW29_25935 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LKW29_25940 PF00814 Glycoprotease family LKW29_25945 PF00583 Acetyltransferase (GNAT) family LKW29_25950 PF00814 Glycoprotease family LKW29_25955 PF00005 ABC transporter LKW29_25955 PF16326 ABC transporter C-terminal domain LKW29_25955 PF12848 ABC transporter LKW29_25960 PF06971 Putative DNA-binding protein N-terminus LKW29_25960 PF02629 CoA binding domain LKW29_25970 PF02517 CPBP intramembrane metalloprotease LKW29_25975 PF00166 Chaperonin 10 Kd subunit LKW29_25980 PF00118 TCP-1/cpn60 chaperonin family LKW29_25985 PF02540 NAD synthase LKW29_25985 PF00958 GMP synthase C terminal domain LKW29_25985 PF00117 Glutamine amidotransferase class-I LKW29_25990 PF00860 Permease family LKW29_25995 PF00486 Transcriptional regulatory protein, C terminal LKW29_25995 PF00072 Response regulator receiver domain LKW29_26000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_26000 PF00989 PAS fold LKW29_26000 PF16736 Single Cache-like LKW29_26000 PF00512 His Kinase A (phospho-acceptor) domain LKW29_26025 PF02673 Bacitracin resistance protein BacA LKW29_26035 PF00005 ABC transporter LKW29_26040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_26040 PF00512 His Kinase A (phospho-acceptor) domain LKW29_26045 PF00072 Response regulator receiver domain LKW29_26045 PF00486 Transcriptional regulatory protein, C terminal LKW29_26070 PF00731 AIR carboxylase LKW29_26075 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LKW29_26075 PF02222 ATP-grasp domain LKW29_26080 PF00206 Lyase LKW29_26080 PF10397 Adenylosuccinate lyase C-terminus LKW29_26085 PF01259 SAICAR synthetase LKW29_26090 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LKW29_26100 PF00586 AIR synthase related protein, N-terminal domain LKW29_26100 PF02769 AIR synthase related protein, C-terminal domain LKW29_26100 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LKW29_26105 PF00156 Phosphoribosyl transferase domain LKW29_26110 PF00586 AIR synthase related protein, N-terminal domain LKW29_26110 PF02769 AIR synthase related protein, C-terminal domain LKW29_26115 PF00551 Formyl transferase LKW29_26120 PF01808 AICARFT/IMPCHase bienzyme LKW29_26120 PF02142 MGS-like domain LKW29_26125 PF02844 Phosphoribosylglycinamide synthetase, N domain LKW29_26125 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LKW29_26125 PF02843 Phosphoribosylglycinamide synthetase, C domain LKW29_26145 PF01884 PcrB family LKW29_26150 PF00580 UvrD/REP helicase N-terminal domain LKW29_26150 PF13361 UvrD-like helicase C-terminal domain LKW29_26155 PF00533 BRCA1 C Terminus (BRCT) domain LKW29_26155 PF01653 NAD-dependent DNA ligase adenylation domain LKW29_26155 PF03120 NAD-dependent DNA ligase OB-fold domain LKW29_26155 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LKW29_26155 PF12826 Helix-hairpin-helix motif LKW29_26160 PF07537 CamS sex pheromone cAM373 precursor LKW29_26165 PF01925 Sulfite exporter TauE/SafE LKW29_26180 PF00857 Isochorismatase family LKW29_26185 PF00005 ABC transporter LKW29_26185 PF09383 NIL domain LKW29_26190 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_26195 PF03180 NLPA lipoprotein LKW29_26220 PF01047 MarR family LKW29_26230 PF02686 Glu-tRNAGln amidotransferase C subunit LKW29_26235 PF01425 Amidase LKW29_26240 PF02934 GatB/GatE catalytic domain LKW29_26240 PF02637 GatB domain LKW29_26245 PF00781 Diacylglycerol kinase catalytic domain LKW29_26250 PF13419 Haloacid dehalogenase-like hydrolase LKW29_26255 PF00202 Aminotransferase class-III LKW29_26260 PF00158 Sigma-54 interaction domain LKW29_26265 PF00171 Aldehyde dehydrogenase family LKW29_26270 PF00893 Small Multidrug Resistance protein LKW29_26275 PF02073 Thermophilic metalloprotease (M29) LKW29_26290 PF01773 Na+ dependent nucleoside transporter N-terminus LKW29_26290 PF07662 Na+ dependent nucleoside transporter C-terminus LKW29_26290 PF07670 Nucleoside recognition LKW29_26295 PF02475 Met-10+ like-protein LKW29_26295 PF01938 TRAM domain LKW29_26295 PF05958 tRNA (Uracil-5-)-methyltransferase LKW29_26300 PF01207 Dihydrouridine synthase (Dus) LKW29_26310 PF07308 Protein of unknown function (DUF1456) LKW29_26325 PF13378 Enolase C-terminal domain-like LKW29_26325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LKW29_26335 PF03553 Na+/H+ antiporter family LKW29_26340 PF01546 Peptidase family M20/M25/M40 LKW29_26340 PF07687 Peptidase dimerisation domain LKW29_26350 PF07992 Pyridine nucleotide-disulphide oxidoreductase LKW29_26350 PF13192 Thioredoxin domain LKW29_26355 PF00578 AhpC/TSA family LKW29_26360 PF01636 Phosphotransferase enzyme family LKW29_26365 PF01008 Initiation factor 2 subunit family LKW29_26370 PF00596 Class II Aldolase and Adducin N-terminal domain LKW29_26375 PF01032 FecCD transport family LKW29_26380 PF01032 FecCD transport family LKW29_26385 PF01497 Periplasmic binding protein LKW29_26390 PF07992 Pyridine nucleotide-disulphide oxidoreductase LKW29_26400 PF12728 Helix-turn-helix domain LKW29_26435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LKW29_26435 PF00512 His Kinase A (phospho-acceptor) domain LKW29_26435 PF00989 PAS fold LKW29_26435 PF13426 PAS domain LKW29_26435 PF13188 PAS domain LKW29_26455 PF10127 RNA repair pathway DNA polymerase beta family LKW29_26460 PF07690 Major Facilitator Superfamily LKW29_26475 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_26480 PF00497 Bacterial extracellular solute-binding proteins, family 3 LKW29_26485 PF00005 ABC transporter LKW29_26490 PF12729 Four helix bundle sensory module for signal transduction LKW29_26490 PF00672 HAMP domain LKW29_26490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LKW29_26495 PF12729 Four helix bundle sensory module for signal transduction LKW29_26495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LKW29_26495 PF00672 HAMP domain LKW29_26500 PF00128 Alpha amylase, catalytic domain LKW29_26500 PF16657 Maltogenic Amylase, C-terminal domain LKW29_26505 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LKW29_26505 PF00367 phosphotransferase system, EIIB LKW29_26505 PF02378 Phosphotransferase system, EIIC LKW29_26510 PF03372 Endonuclease/Exonuclease/phosphatase family LKW29_26515 PF01061 ABC-2 type transporter LKW29_26520 PF01131 DNA topoisomerase LKW29_26520 PF01751 Toprim domain LKW29_26525 PF02110 Hydroxyethylthiazole kinase family LKW29_26530 PF02581 Thiamine monophosphate synthase LKW29_26535 PF03605 Anaerobic c4-dicarboxylate membrane transporter LKW29_26540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LKW29_26540 PF00672 HAMP domain LKW29_26545 PF01910 Thiamine-binding protein LKW29_26550 PF00528 Binding-protein-dependent transport system inner membrane component LKW29_26560 PF00005 ABC transporter LKW29_26565 PF00005 ABC transporter LKW29_26565 PF12848 ABC transporter LKW29_26590 PF08360 QacR-like protein, C-terminal region LKW29_26590 PF00440 Bacterial regulatory proteins, tetR family LKW29_26610 PF11700 Vacuole effluxer Atg22 like LKW29_26625 PF03129 Anticodon binding domain LKW29_26625 PF09180 Prolyl-tRNA synthetase, C-terminal LKW29_26625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LKW29_26635 PF00480 ROK family LKW29_26640 PF02342 TerD domain LKW29_26645 PF02342 TerD domain LKW29_26650 PF02342 TerD domain LKW29_26655 PF03741 Integral membrane protein TerC family LKW29_26660 PF14266 Putative component of 'biosynthetic module' LKW29_26665 PF05816 Toxic anion resistance protein (TelA) LKW29_26670 PF00689 Cation transporting ATPase, C-terminus LKW29_26670 PF00690 Cation transporter/ATPase, N-terminus LKW29_26675 PF06569 Protein of unknown function (DUF1128) LKW29_26680 PF01451 Low molecular weight phosphotyrosine protein phosphatase LKW29_26690 PF03631 Virulence factor BrkB LKW29_26700 PF00892 EamA-like transporter family LKW29_26720 PF09335 SNARE associated Golgi protein LKW29_26735 PF16242 Pyridoxamine 5'-phosphate oxidase like LKW29_26740 PF01699 Sodium/calcium exchanger protein LKW29_26745 PF14167 YfkD-like protein LKW29_26750 PF04055 Radical SAM superfamily LKW29_26750 PF08756 YfkB-like domain LKW29_26760 PF05681 Fumarate hydratase (Fumerase) LKW29_26760 PF05683 Fumarase C-terminus LKW29_26765 PF01522 Polysaccharide deacetylase LKW29_26775 PF05958 tRNA (Uracil-5-)-methyltransferase LKW29_26775 PF01938 TRAM domain LKW29_26780 PF14659 Phage integrase, N-terminal SAM-like domain LKW29_26780 PF00589 Phage integrase family LKW29_26790 PF01381 Helix-turn-helix LKW29_26805 PF01381 Helix-turn-helix LKW29_26840 PF07319 Primosomal protein DnaI N-terminus LKW29_26840 PF01695 IstB-like ATP binding protein LKW29_27065 PF01183 Glycosyl hydrolases family 25 LKW29_27075 PF01416 tRNA pseudouridine synthase LKW29_27085 PF13426 PAS domain LKW29_27085 PF02954 Bacterial regulatory protein, Fis family LKW29_27085 PF00158 Sigma-54 interaction domain LKW29_27095 PF00324 Amino acid permease LKW29_27100 PF07687 Peptidase dimerisation domain LKW29_27100 PF01546 Peptidase family M20/M25/M40 LKW29_27125 PF04960 Glutaminase LKW29_27130 PF02378 Phosphotransferase system, EIIC LKW29_27130 PF00367 phosphotransferase system, EIIB LKW29_27135 PF00144 Beta-lactamase LKW29_27150 PF00535 Glycosyl transferase family 2 LKW29_27160 PF01370 NAD dependent epimerase/dehydratase family LKW29_27160 PF02911 Formyl transferase, C-terminal domain LKW29_27160 PF00551 Formyl transferase LKW29_27165 PF00535 Glycosyl transferase family 2 LKW29_27170 PF02901 Pyruvate formate lyase-like LKW29_27170 PF01228 Glycine radical LKW29_27175 PF04055 Radical SAM superfamily LKW29_27180 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LKW29_27180 PF04101 Glycosyltransferase family 28 C-terminal domain LKW29_27195 PF01979 Amidohydrolase family LKW29_27200 PF01370 NAD dependent epimerase/dehydratase family LKW29_27200 PF08338 Domain of unknown function (DUF1731) LKW29_27205 PF02631 RecX family LKW29_27220 PF08176 Small acid-soluble spore protein K family LKW29_27225 PF14043 WVELL protein LKW29_27230 PF04307 LexA-binding, inner membrane-associated putative hydrolase LKW29_27235 PF14815 NUDIX domain LKW29_27235 PF00730 HhH-GPD superfamily base excision DNA repair protein LKW29_27245 PF04259 Small, acid-soluble spore protein, gamma-type LKW29_27250 PF14182 YgaB-like protein LKW29_27255 PF04167 Protein of unknown function (DUF402) LKW29_27260 PF00664 ABC transporter transmembrane region LKW29_27260 PF00005 ABC transporter LKW29_27265 PF06081 Aromatic acid exporter family member 1 LKW29_27270 PF01493 GXGXG motif LKW29_27270 PF00310 Glutamine amidotransferases class-II LKW29_27270 PF01645 Conserved region in glutamate synthase LKW29_27270 PF04898 Glutamate synthase central domain LKW29_27275 PF00202 Aminotransferase class-III LKW29_27280 PF00005 ABC transporter LKW29_27295 PF07885 Ion channel LKW29_27300 PF00578 AhpC/TSA family LKW29_27305 PF01475 Ferric uptake regulator family LKW29_27310 PF11023 Zinc-ribbon containing domain LKW29_27325 PF00437 Type II/IV secretion system protein LKW29_27465 PF04235 Protein of unknown function (DUF418) LKW29_27490 PF00395 S-layer homology domain LKW29_27495 PF01569 PAP2 superfamily LKW29_27510 PF00535 Glycosyl transferase family 2 LKW29_27515 PF00483 Nucleotidyl transferase LKW29_27520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LKW29_27520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LKW29_27520 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LKW29_27565 PF03497 Anthrax toxin LF subunit LKW29_27565 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain LKW29_27625 PF03845 Spore germination protein LKW29_27630 PF03323 Bacillus/Clostridium GerA spore germination protein LKW29_27635 PF05504 Spore germination B3/ GerAC like, C-terminal LKW29_27645 PF07691 PA14 domain LKW29_27645 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain LKW29_27645 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 LKW29_27645 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 LKW29_27650 PF01022 Bacterial regulatory protein, arsR family LKW29_27670 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain LKW29_27670 PF09156 Anthrax toxin lethal factor, middle domain LKW29_27685 PF18277 AbrB C-terminal domain LKW29_27685 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LKW29_27695 PF02899 Phage integrase, N-terminal SAM-like domain LKW29_27695 PF00589 Phage integrase family LKW29_27725 PF04740 LXG domain of WXG superfamily LKW29_27725 PF14436 Bacterial EndoU nuclease LKW29_27750 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LKW29_27760 PF00589 Phage integrase family LKW29_27785 PF18801 response regulator aspartate phosphatase H, N terminal LKW29_27795 PF17209 Hfq protein LKW29_27800 PF01022 Bacterial regulatory protein, arsR family LKW29_27805 PF02600 Disulfide bond formation protein DsbB LKW29_27820 PF00565 Staphylococcal nuclease homologue LKW29_27825 PF01751 Toprim domain LKW29_27825 PF01131 DNA topoisomerase LKW29_27825 PF13342 C-terminal repeat of topoisomerase LKW29_27850 PF08378 Nuclease-related domain LKW29_27890 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LKW29_27970 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LKW29_28020 PF18765 Polymerase beta, Nucleotidyltransferase LKW29_28020 PF13427 Domain of unknown function (DUF4111) LKW29_28045 PF01609 Transposase DDE domain LKW29_28050 PF01609 Transposase DDE domain LKW29_28075 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LKW29_28075 PF17854 FtsK alpha domain LKW29_28075 PF09397 Ftsk gamma domain LKW29_28075 PF01580 FtsK/SpoIIIE family LKW29_28090 PF00091 Tubulin/FtsZ family, GTPase domain LKW29_28170 PF17362 Family of unknown function LKW29_28195 PF08708 Primase C terminal 1 (PriCT-1) LKW29_28200 PF13614 AAA domain LKW29_28215 PF01520 N-acetylmuramoyl-L-alanine amidase LKW29_28215 PF00395 S-layer homology domain LKW29_28235 PF01906 Putative heavy-metal-binding LKW29_28240 PF02517 CPBP intramembrane metalloprotease LKW29_28245 PF04463 Protein of unknown function (DUF523) LKW29_28250 PF00440 Bacterial regulatory proteins, tetR family LKW29_28270 PF08280 M protein trans-acting positive regulator (MGA) HTH domain LKW29_28270 PF05043 Mga helix-turn-helix domain LKW29_28290 PF09587 Bacterial capsule synthesis protein PGA_cap LKW29_28295 PF14102 Capsule biosynthesis CapC LKW29_28300 PF08245 Mur ligase middle domain LKW29_28310 PF01022 Bacterial regulatory protein, arsR family LKW29_28325 PF10502 Signal peptidase, peptidase S26 LKW29_28335 PF09385 Histidine kinase N terminal LKW29_28340 PF00874 PRD domain LKW29_28340 PF05043 Mga helix-turn-helix domain LKW29_28340 PF08279 HTH domain LKW29_28345 PF08279 HTH domain LKW29_28345 PF05043 Mga helix-turn-helix domain LKW29_28345 PF00874 PRD domain LKW29_28360 PF01810 LysE type translocator LKW29_28375 PF00874 PRD domain LKW29_28375 PF08280 M protein trans-acting positive regulator (MGA) HTH domain LKW29_28375 PF05043 Mga helix-turn-helix domain LKW29_28405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LKW29_28410 PF13411 MerR HTH family regulatory protein LKW29_28410 PF13152 Protein of unknown function (DUF3967) LKW29_28415 PF00817 impB/mucB/samB family LKW29_28415 PF11798 IMS family HHH motif LKW29_28415 PF11799 impB/mucB/samB family C-terminal domain LKW29_28435 PF17443 Uncharacterized protein pXO2-72 LKW29_28475 PF13154 Protein of unknown function (DUF3991) LKW29_28490 PF18840 Large polyvalent protein associated domain 25 LKW29_28495 PF17630 Family of unknown function (DUF5511) LKW29_28500 PF17633 Family of unknown function (DUF5514) LKW29_28525 PF17632 Family of unknown function (DUF5513) LKW29_28580 PF04956 TrbC/VIRB2 family LKW29_28610 PF00437 Type II/IV secretion system protein LKW29_28645 PF17631 Family of unknown function (DUF5512)